locus-tag class description IPR003593 AAA+ ATPase domain IPR001957 Chromosomal replication control, initiator DnaA IPR020591 Chromosomal replication control, initiator DnaA-like IPR018312 Chromosomal replication control, initiator DnaA, conserved site IPR013317 Chromosomal replication initiator protein DnaA IPR013159 Chromosomal replication initiator, DnaA C-terminal IPR024633 DnaA N-terminal domain IPR038454 DnaA, N-terminal domain superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR010921 Trp repressor/replication initiator IPR001001 DNA polymerase III, beta sliding clamp IPR022635 DNA polymerase III, beta sliding clamp, C-terminal IPR022637 DNA polymerase III, beta sliding clamp, central IPR022634 DNA polymerase III, beta sliding clamp, N-terminal IPR017824 Aminodeoxychorismate lyase, class IV IPR001544 Aminotransferase class IV IPR018300 Aminotransferase, class IV, conserved site IPR036038 Aminotransferase-like, PLP-dependent enzymes IPR003593 AAA+ ATPase domain IPR011527 ABC transporter type 1, transmembrane domain IPR036640 ABC transporter type 1, transmembrane domain superfamily IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR039421 Type I protein exporter IPR010343 Aromatic acid exporter family member 1 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase IPR005814 Aminotransferase class-III IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR011991 ArsR-like helix-turn-helix domain IPR001845 HTH ArsR-type DNA-binding domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR013099 Potassium channel domain IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant IPR024706 Peroxiredoxin, AhpC-type IPR036249 Thioredoxin-like superfamily IPR013766 Thioredoxin domain IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain IPR036291 NAD(P)-binding domain superfamily IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain IPR036291 NAD(P)-binding domain superfamily IPR010375 Cyclic-di-AMP receptor IPR011322 Nitrogen regulatory PII-like, alpha/beta IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal IPR010375 Cyclic-di-AMP receptor IPR011322 Nitrogen regulatory PII-like, alpha/beta IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal IPR006390 Dihydropteroate synthase IPR011005 Dihydropteroate synthase-like IPR000489 Pterin-binding domain IPR002481 Ferric-uptake regulator IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR020912 Uncharacterised protein family UPF0295 IPR029348 Nucleotidyltransferase-like domain IPR041143 YgxA-like, helix-turn-helix domain IPR006156 Dihydroneopterin aldolase IPR006157 Dihydroneopterin aldolase/epimerase domain IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IPR001387 Cro/C1-type helix-turn-helix domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR006480 Bacteriophage holin family IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain IPR007730 Sporulation-like domain IPR036680 Sporulation-like domain superfamily IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain IPR007730 Sporulation-like domain IPR036680 Sporulation-like domain superfamily IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain IPR007730 Sporulation-like domain IPR036680 Sporulation-like domain superfamily IPR014001 Helicase superfamily 1/2, ATP-binding domain IPR001650 Helicase, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR038718 SNF2-like, N-terminal domain superfamily IPR000330 SNF2-related, N-terminal domain IPR014001 Helicase superfamily 1/2, ATP-binding domain IPR001650 Helicase, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR038718 SNF2-like, N-terminal domain superfamily IPR000330 SNF2-related, N-terminal domain IPR013785 Aldolase-type TIM barrel IPR035587 DUS-like, FMN-binding domain IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 IPR001269 tRNA-dihydrouridine synthase IPR018517 tRNA-dihydrouridine synthase, conserved site IPR023838 Type VII secretion system EsaA IPR036689 ESAT-6-like superfamily IPR010310 Type VII secretion system ESAT-6-like IPR018778 Type VII secretion system EssB IPR003593 AAA+ ATPase domain IPR023839 Firmicutes EssC, C-terminal IPR022206 Firmicutes EssC, N-terminal IPR002543 FtsK domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) IPR006195 Aminoacyl-tRNA synthetase, class II IPR002313 Lysine-tRNA ligase, class II IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II IPR018149 Lysyl-tRNA synthetase, class II, C-terminal IPR012340 Nucleic acid-binding, OB-fold IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type IPR032693 YtkA-like domain IPR015797 NUDIX hydrolase-like domain superfamily IPR000086 NUDIX hydrolase domain IPR023772 DNA-binding HTH domain, TetR-type, conserved site IPR009057 Homeobox-like domain superfamily IPR001647 DNA-binding HTH domain, TetR-type IPR002491 ABC transporter periplasmic binding domain IPR009057 Homeobox-like domain superfamily IPR018060 DNA binding HTH domain, AraC-type IPR018062 HTH domain AraC-type, conserved site IPR020449 Transcription regulator HTH, AraC- type IPR002491 ABC transporter periplasmic binding domain IPR004632 4-aminobutyrate aminotransferase, bacterial IPR005814 Aminotransferase class-III IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR003593 AAA+ ATPase domain IPR009057 Homeobox-like domain superfamily IPR002197 DNA binding HTH domain, Fis-type IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR000014 PAS domain IPR035965 PAS domain superfamily IPR002078 RNA polymerase sigma factor 54 interaction domain IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IPR025944 Sigma-54 interaction domain, conserved site IPR002293 Amino acid/polyamine transporter I IPR016161 Aldehyde/histidinol dehydrogenase IPR016163 Aldehyde dehydrogenase, C-terminal IPR016160 Aldehyde dehydrogenase, cysteine active site IPR029510 Aldehyde dehydrogenase, glutamic acid active site IPR016162 Aldehyde dehydrogenase, N-terminal IPR015590 Aldehyde dehydrogenase domain IPR010102 Succinate semialdehyde dehydrogenase IPR007395 Putative neutral zinc metallopeptidase IPR007395 Putative neutral zinc metallopeptidase IPR022838 GTP cyclohydrolase FolE2 IPR003801 GTP cyclohydrolase FolE2/MptA IPR009057 Homeobox-like domain superfamily IPR001647 DNA-binding HTH domain, TetR-type IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IPR041603 YvdT, C-terminal IPR009057 Homeobox-like domain superfamily IPR001647 DNA-binding HTH domain, TetR-type IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IPR041603 YvdT, C-terminal IPR009057 Homeobox-like domain superfamily IPR001647 DNA-binding HTH domain, TetR-type IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IPR041603 YvdT, C-terminal IPR009057 Homeobox-like domain superfamily IPR001647 DNA-binding HTH domain, TetR-type IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IPR041603 YvdT, C-terminal IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR025302 Domain of unknown function DUF4162 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR016161 Aldehyde/histidinol dehydrogenase IPR016163 Aldehyde dehydrogenase, C-terminal IPR029510 Aldehyde dehydrogenase, glutamic acid active site IPR016162 Aldehyde dehydrogenase, N-terminal IPR015590 Aldehyde dehydrogenase domain IPR016161 Aldehyde/histidinol dehydrogenase IPR016163 Aldehyde dehydrogenase, C-terminal IPR029510 Aldehyde dehydrogenase, glutamic acid active site IPR016162 Aldehyde dehydrogenase, N-terminal IPR015590 Aldehyde dehydrogenase domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR029151 Periplasmic sensor-like domain superfamily IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR019805 Heat shock protein Hsp90, conserved site IPR037196 HSP90, C-terminal domain IPR001404 Heat shock protein Hsp90 family IPR020575 Heat shock protein Hsp90, N-terminal IPR020568 Ribosomal protein S5 domain 2-type fold IPR032713 Putative multidrug resistance efflux transporter IPR002577 Helix-turn-helix, HxlR type IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR008254 Flavodoxin/nitric oxide synthase IPR029039 Flavoprotein-like superfamily IPR010089 Flavoprotein WrbA-like IPR005025 NADPH-dependent FMN reductase-like IPR020471 Aldo/keto reductase IPR023210 NADP-dependent oxidoreductase domain IPR036812 NADP-dependent oxidoreductase domain superfamily IPR008334 5'-Nucleotidase, C-terminal IPR036907 5'-Nucleotidase, C-terminal domain superfamily IPR006179 5'-Nucleotidase/apyrase IPR004843 Calcineurin-like phosphoesterase domain, ApaH type IPR029052 Metallo-dependent phosphatase-like IPR030678 Peptide/nickel binding protein, MppA-type IPR039424 Solute-binding protein family 5 IPR023765 Solute-binding protein family 5, conserved site IPR000914 Solute-binding protein family 5 domain IPR030678 Peptide/nickel binding protein, MppA-type IPR039424 Solute-binding protein family 5 IPR023765 Solute-binding protein family 5, conserved site IPR000914 Solute-binding protein family 5 domain IPR002177 DNA-binding protein Dps IPR023188 DNA-binding protein Dps, conserved site IPR012347 Ferritin-like IPR009078 Ferritin-like superfamily IPR008331 Ferritin/DPS protein domain IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IPR016024 Armadillo-type fold IPR013542 Domain of unknown function DUF1730 IPR004155 PBS lyase HEAT-like repeat IPR004453 Epoxyqueuosine reductase QueG IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain IPR023546 Methylated-DNA--protein-cysteine methyltransferase IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily IPR036388 Winged helix-like DNA-binding domain superfamily IPR024301 Putative amidase domain IPR029028 Alpha/beta knot methyltransferases IPR001537 tRNA/rRNA methyltransferase, SpoU type IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IPR037294 ABC transporter, BtuC-like IPR000522 ABC transporter, permease protein, BtuC-like IPR037294 ABC transporter, BtuC-like IPR000522 ABC transporter, permease protein, BtuC-like IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR002491 ABC transporter periplasmic binding domain IPR033870 FatB domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR013153 PrkA AAA domain IPR010650 PrkA C-terminal domain IPR016230 Serine-protein kinase, PrkA IPR036286 LexA/Signal peptidase-like superfamily IPR000223 Peptidase S26A, signal peptidase I IPR019758 Peptidase S26A, signal peptidase I, conserved site IPR019757 Peptidase S26A, signal peptidase I, lysine active site IPR019756 Peptidase S26A, signal peptidase I, serine active site IPR019533 Peptidase S26 IPR014230 Sporulation protein YhbH IPR006698 Uncharacterised protein family UPF0229 IPR009078 Ferritin-like superfamily IPR003251 Rubrerythrin IPR005814 Aminotransferase class-III IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR002491 ABC transporter periplasmic binding domain IPR037294 ABC transporter, BtuC-like IPR000522 ABC transporter, permease protein, BtuC-like IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005224 Sugar fermentation stimulation protein IPR040452 Sugar fermentation stimulation protein, C-terminal IPR041465 SfsA, N-terminal OB domain IPR007349 Domain of unknown function DUF418 IPR007349 Domain of unknown function DUF418 IPR007349 Domain of unknown function DUF418 IPR007349 Domain of unknown function DUF418 IPR007349 Domain of unknown function DUF418 IPR003010 Carbon-nitrogen hydrolase IPR036526 Carbon-nitrogen hydrolase superfamily IPR001110 Uncharacterised protein family UPF0012, conserved site IPR016446 Flavin oxidoreductase Frp family IPR029479 Nitroreductase IPR000415 Nitroreductase-like IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain IPR011006 CheY-like superfamily IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR000792 Transcription regulator LuxR, C-terminal IPR011006 CheY-like superfamily IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR000792 Transcription regulator LuxR, C-terminal IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR030489 Transcription regulator Rrf2-type, conserved site IPR000944 Transcription regulator Rrf2-type IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR001834 NADH:cytochrome b5 reductase-like IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain IPR017927 FAD-binding domain, ferredoxin reductase-type IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IPR000971 Globin IPR009050 Globin-like superfamily IPR012292 Globin/Protoglobin IPR023950 Flavohemoprotein IPR001433 Oxidoreductase FAD/NAD(P)-binding IPR017938 Riboflavin synthase-like beta-barrel IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase IPR036264 Bacterial exopeptidase dimerisation domain IPR002933 Peptidase M20 IPR011650 Peptidase M20, dimerisation domain IPR004839 Aminotransferase, class I/classII IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR037054 Alpha-glucuronidase, C-terminal domain superfamily IPR011395 Alpha glucuronidase IPR005154 Alpha glucuronidase, N-terminal IPR011099 Glycosyl hydrolase family 67, C-terminal IPR011100 Glycosyl hydrolase family 67, catalytic domain IPR017853 Glycoside hydrolase superfamily IPR029018 Beta-hexosaminidase-like, domain 2 IPR004628 Mannonate dehydratase IPR036237 Xylose isomerase-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR036291 NAD(P)-binding domain superfamily IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR002347 Short-chain dehydrogenase/reductase SDR IPR000514 Glycoside hydrolase, family 39 IPR017853 Glycoside hydrolase superfamily IPR012347 Ferritin-like IPR009078 Ferritin-like superfamily IPR007760 Manganese catalase IPR027407 Manganese catalase, C-terminal IPR039377 Manganese catalase, ferritin-like di-iron-binding domain IPR012347 Ferritin-like IPR009078 Ferritin-like superfamily IPR007760 Manganese catalase IPR027407 Manganese catalase, C-terminal IPR039377 Manganese catalase, ferritin-like di-iron-binding domain IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site IPR024084 Isopropylmalate dehydrogenase-like domain IPR011829 Tartrate dehydrogenase IPR011234 Fumarylacetoacetase-like, C-terminal IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily IPR041522 CdaR, GGDEF-like domain IPR029016 GAF-like domain superfamily IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal IPR025736 PucR C-terminal helix-turn-helix domain IPR042070 PucR C-terminal helix-turn-helix domain superfamily IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR008995 Molybdate/tungstate binding, C-terminal IPR040582 MalK, OB fold domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005116 Transport-associated OB, type 1 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR006059 Bacterial extracellular solute-binding protein IPR006061 Solute-binding family 1, conserved site IPR030395 Glycerophosphodiester phosphodiesterase domain IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR037294 ABC transporter, BtuC-like IPR000522 ABC transporter, permease protein, BtuC-like IPR037294 ABC transporter, BtuC-like IPR000522 ABC transporter, permease protein, BtuC-like IPR011833 Glycogen/starch/alpha-glucan phosphorylase IPR000811 Glycosyl transferase, family 35 IPR035090 Phosphorylase pyridoxal-phosphate attachment site IPR001296 Glycosyl transferase, family 1 IPR011835 Bacterial/plant glycogen synthase IPR013534 Starch synthase, catalytic domain IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit IPR005835 Nucleotidyl transferase domain IPR029044 Nucleotide-diphospho-sugar transferases IPR011004 Trimeric LpxA-like superfamily IPR011831 Glucose-1-phosphate adenylyltransferase IPR005836 ADP-glucose pyrophosphorylase, conserved site IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial IPR005835 Nucleotidyl transferase domain IPR029044 Nucleotide-diphospho-sugar transferases IPR011004 Trimeric LpxA-like superfamily IPR016181 Acyl-CoA N-acyltransferase IPR003010 Carbon-nitrogen hydrolase IPR036526 Carbon-nitrogen hydrolase superfamily IPR000182 GNAT domain IPR001110 Uncharacterised protein family UPF0012, conserved site IPR006699 Glycerol uptake operon antiterminator IPR035928 GlpP-like superfamily IPR023271 Aquaporin-like IPR000425 Major intrinsic protein IPR022357 Major intrinsic protein, conserved site IPR000577 Carbohydrate kinase, FGGY IPR018485 Carbohydrate kinase, FGGY, C-terminal IPR018483 Carbohydrate kinase, FGGY, conserved site IPR018484 Carbohydrate kinase, FGGY, N-terminal IPR005999 Glycerol kinase IPR000835 MarR-type HTH domain IPR000600 ROK family IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR031656 Alpha-glycerophosphate oxidase, C-terminal IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily IPR006076 FAD dependent oxidoreductase IPR036188 FAD/NAD(P)-binding domain superfamily IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic IPR016067 S-adenosylmethionine decarboxylase, core IPR017716 S-adenosylmethionine decarboxylase proenzyme IPR004995 Bacillus/Clostridium Ger spore germination protein IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III IPR005843 Alpha-D-phosphohexomutase, C-terminal IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily IPR016066 Alpha-D-phosphohexomutase, conserved site IPR005841 Alpha-D-phosphohexomutase superfamily IPR000705 Galactokinase IPR022963 Galactokinase, bacterial IPR019741 Galactokinase, conserved site IPR019539 Galactokinase galactose-binding domain IPR013750 GHMP kinase, C-terminal domain IPR036554 GHMP kinase, C-terminal domain superfamily IPR006204 GHMP kinase N-terminal domain IPR006203 GHMP kinase, ATP-binding, conserved site IPR006206 Mevalonate/galactokinase IPR020568 Ribosomal protein S5 domain 2-type fold IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPR016040 NAD(P)-binding domain IPR036291 NAD(P)-binding domain superfamily IPR005886 UDP-glucose 4-epimerase IPR000766 Galactose-1-phosphate uridyl transferase, class II IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal IPR002765 Uncharacterised protein family UPF0145 IPR035439 UPF0145 domain superfamily IPR007390 Sporulation stage V, protein R IPR007390 Sporulation stage V, protein R IPR013517 FG-GAP repeat IPR013783 Immunoglobulin-like fold IPR041624 Rhamnogalacturonan I lyase beta-sheet domain IPR034641 Polysaccharide lyase family 11 IPR013517 FG-GAP repeat IPR013783 Immunoglobulin-like fold IPR041624 Rhamnogalacturonan I lyase beta-sheet domain IPR034641 Polysaccharide lyase family 11 IPR037459 Rhamnogalacturonan acetylesterase RhgT-like IPR013830 SGNH hydrolase-type esterase domain IPR036514 SGNH hydrolase superfamily IPR006059 Bacterial extracellular solute-binding protein IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR008928 Six-hairpin glycosidase superfamily IPR012341 Six-hairpin glycosidase-like superfamily IPR010905 Glycosyl hydrolase, family 88 IPR006938 Protein of unknown function DUF624 IPR006938 Protein of unknown function DUF624 IPR006938 Protein of unknown function DUF624 IPR006938 Protein of unknown function DUF624 IPR006938 Protein of unknown function DUF624 IPR006938 Protein of unknown function DUF624 IPR006938 Protein of unknown function DUF624 IPR033479 Double Cache domain 1 IPR003660 HAMP domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR010559 Signal transduction histidine kinase, internal region IPR033479 Double Cache domain 1 IPR003660 HAMP domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR010559 Signal transduction histidine kinase, internal region IPR033479 Double Cache domain 1 IPR003660 HAMP domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR010559 Signal transduction histidine kinase, internal region IPR033479 Double Cache domain 1 IPR003660 HAMP domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR010559 Signal transduction histidine kinase, internal region IPR033479 Double Cache domain 1 IPR003660 HAMP domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR010559 Signal transduction histidine kinase, internal region IPR033479 Double Cache domain 1 IPR003660 HAMP domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR010559 Signal transduction histidine kinase, internal region IPR033479 Double Cache domain 1 IPR003660 HAMP domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR010559 Signal transduction histidine kinase, internal region IPR011006 CheY-like superfamily IPR009057 Homeobox-like domain superfamily IPR018060 DNA binding HTH domain, AraC-type IPR001789 Signal transduction response regulator, receiver domain IPR011006 CheY-like superfamily IPR009057 Homeobox-like domain superfamily IPR018060 DNA binding HTH domain, AraC-type IPR001789 Signal transduction response regulator, receiver domain IPR011006 CheY-like superfamily IPR009057 Homeobox-like domain superfamily IPR018060 DNA binding HTH domain, AraC-type IPR001789 Signal transduction response regulator, receiver domain IPR011006 CheY-like superfamily IPR009057 Homeobox-like domain superfamily IPR018060 DNA binding HTH domain, AraC-type IPR001789 Signal transduction response regulator, receiver domain IPR011006 CheY-like superfamily IPR009057 Homeobox-like domain superfamily IPR018060 DNA binding HTH domain, AraC-type IPR001789 Signal transduction response regulator, receiver domain IPR011006 CheY-like superfamily IPR009057 Homeobox-like domain superfamily IPR018060 DNA binding HTH domain, AraC-type IPR001789 Signal transduction response regulator, receiver domain IPR011006 CheY-like superfamily IPR009057 Homeobox-like domain superfamily IPR018060 DNA binding HTH domain, AraC-type IPR001789 Signal transduction response regulator, receiver domain IPR001519 Ferritin IPR012347 Ferritin-like IPR009040 Ferritin-like diiron domain IPR009078 Ferritin-like superfamily IPR008331 Ferritin/DPS protein domain IPR041719 Ferritin, prokaryotic-type IPR003593 AAA+ ATPase domain IPR011527 ABC transporter type 1, transmembrane domain IPR036640 ABC transporter type 1, transmembrane domain superfamily IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR039421 Type I protein exporter IPR003593 AAA+ ATPase domain IPR011527 ABC transporter type 1, transmembrane domain IPR036640 ABC transporter type 1, transmembrane domain superfamily IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR039421 Type I protein exporter IPR004839 Aminotransferase, class I/classII IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR000175 Sodium:neurotransmitter symporter IPR037272 Sodium:neurotransmitter symporter superfamily IPR000175 Sodium:neurotransmitter symporter IPR037272 Sodium:neurotransmitter symporter superfamily IPR006680 Amidohydrolase-related IPR033826 Isoaspartyl-dipeptidase IPR011059 Metal-dependent hydrolase, composite domain superfamily IPR032466 Metal-dependent hydrolase IPR010229 Peptidase M38, beta-aspartyl dipeptidase IPR006089 Acyl-CoA dehydrogenase, conserved site IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IPR036250 Acyl-CoA dehydrogenase-like, C-terminal IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily IPR025110 AMP-binding enzyme, C-terminal domain IPR020845 AMP-binding, conserved site IPR000873 AMP-dependent synthetase/ligase IPR025110 AMP-binding enzyme, C-terminal domain IPR020845 AMP-binding, conserved site IPR000873 AMP-dependent synthetase/ligase IPR011761 ATP-grasp fold IPR005481 Biotin carboxylase-like, N-terminal domain IPR011764 Biotin carboxylation domain IPR005482 Biotin carboxylase, C-terminal IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain IPR016185 Pre-ATP-grasp domain superfamily IPR011054 Rudiment single hybrid motif IPR000089 Biotin/lipoyl attachment IPR011053 Single hybrid motif IPR013785 Aldolase-type TIM barrel IPR000891 Pyruvate carboxyltransferase IPR029045 ClpP/crotonase-like domain superfamily IPR018376 Enoyl-CoA hydratase/isomerase, conserved site IPR001753 Enoyl-CoA hydratase/isomerase IPR014748 Enoyl-CoA hydratase, C-terminal IPR029045 ClpP/crotonase-like domain superfamily IPR018376 Enoyl-CoA hydratase/isomerase, conserved site IPR001753 Enoyl-CoA hydratase/isomerase IPR014748 Enoyl-CoA hydratase, C-terminal IPR034733 Acetyl-CoA carboxylase IPR029045 ClpP/crotonase-like domain superfamily IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal IPR011904 Acetate-CoA ligase IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain IPR025110 AMP-binding enzyme, C-terminal domain IPR020845 AMP-binding, conserved site IPR000873 AMP-dependent synthetase/ligase IPR042099 AMP-dependent synthetase-like superfamily IPR001448 Small acid-soluble spore protein, alpha/beta-type IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site IPR038300 SASP, alpha/beta-type superfamily IPR001448 Small acid-soluble spore protein, alpha/beta-type IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site IPR038300 SASP, alpha/beta-type superfamily IPR001448 Small acid-soluble spore protein, alpha/beta-type IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site IPR038300 SASP, alpha/beta-type superfamily IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR008995 Molybdate/tungstate binding, C-terminal IPR040582 MalK, OB fold domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005116 Transport-associated OB, type 1 IPR025736 PucR C-terminal helix-turn-helix domain IPR042070 PucR C-terminal helix-turn-helix domain superfamily IPR026838 Endospore coat-associated protein YheC/D IPR007383 Protein of unknown function DUF445 IPR016991 Protein of unknown function UCP032178 IPR010368 Control of competence regulator ComK, YlbF/YmcA IPR023378 YheA/YmcA-like domain superfamily IPR002528 Multi antimicrobial extrusion protein IPR000150 Cof family IPR036412 HAD-like superfamily IPR006379 HAD-superfamily hydrolase, subfamily IIB IPR023214 HAD superfamily IPR034505 Anaerobic coproporphyrinogen-III oxidase IPR006638 Elp3/MiaB/NifB IPR023995 Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ IPR007197 Radical SAM IPR023404 Radical SAM, alpha/beta horseshoe IPR011006 CheY-like superfamily IPR001867 OmpR/PhoB-type DNA-binding domain IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR039420 Transcriptional regulatory protein WalR-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR011006 CheY-like superfamily IPR001867 OmpR/PhoB-type DNA-binding domain IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR039420 Transcriptional regulatory protein WalR-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR000014 PAS domain IPR035965 PAS domain superfamily IPR013767 PAS fold IPR031967 PhoR, single Cache-like domain IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR000014 PAS domain IPR035965 PAS domain superfamily IPR013767 PAS fold IPR031967 PhoR, single Cache-like domain IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR000014 PAS domain IPR035965 PAS domain superfamily IPR013767 PAS fold IPR031967 PhoR, single Cache-like domain IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR003593 AAA+ ATPase domain IPR011527 ABC transporter type 1, transmembrane domain IPR036640 ABC transporter type 1, transmembrane domain superfamily IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR039421 Type I protein exporter IPR003593 AAA+ ATPase domain IPR011527 ABC transporter type 1, transmembrane domain IPR036640 ABC transporter type 1, transmembrane domain superfamily IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR039421 Type I protein exporter IPR002637 Ham1-like protein IPR029001 Inosine triphosphate pyrophosphatase-like IPR000477 Reverse transcriptase domain IPR000477 Reverse transcriptase domain IPR000477 Reverse transcriptase domain IPR000477 Reverse transcriptase domain IPR000477 Reverse transcriptase domain IPR025544 YhzD-like protein IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR025302 Domain of unknown function DUF4162 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR028055 Membrane insertase YidC/Oxa1, C-terminal IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes IPR008463 Transcriptional regulator CtsR IPR041473 CtsR, C-terminal dimerization domain IPR041908 CtsR, C-terminal domain superfamily IPR040465 CtsR, N-terminal HTH domain IPR041902 CtsR, N-terminal domain superfamily IPR011006 CheY-like superfamily IPR001867 OmpR/PhoB-type DNA-binding domain IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR039420 Transcriptional regulatory protein WalR-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR003660 HAMP domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR004734 Multidrug resistance protein IPR005829 Sugar transporter, conserved site IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR004734 Multidrug resistance protein IPR005829 Sugar transporter, conserved site IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR004734 Multidrug resistance protein IPR005829 Sugar transporter, conserved site IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG IPR020873 3'-5' exoribonuclease YhaM IPR003607 HD/PDEase domain IPR006674 HD domain IPR012340 Nucleic acid-binding, OB-fold IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type IPR023059 Foldase protein PrsA IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type IPR027304 Trigger factor/SurA domain superfamily IPR010070 Sporulation protein YjcZ-like IPR001943 UVR domain IPR036876 UVR domain superfamily IPR025542 YacH protein IPR021683 Putative zincin peptidase IPR000835 MarR-type HTH domain IPR023488 HTH-type transcriptional regulator Hpr IPR023187 Transcriptional regulator MarR-type, conserved site IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR000192 Aminotransferase class V domain IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IPR022278 Phosphoserine aminotransferase IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR039384 HINT family IPR019808 Histidine triad, conserved site IPR001310 Histidine triad (HIT) protein IPR011146 HIT-like domain IPR036265 HIT-like superfamily IPR023660 Protein arginine kinase IPR000749 ATP:guanido phosphotransferase IPR022415 ATP:guanido phosphotransferase active site IPR022414 ATP:guanido phosphotransferase, catalytic domain IPR014746 Glutamine synthetase/guanido kinase, catalytic domain IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR010288 Bacterial ABC transporter EcsB IPR024787 EcsC protein IPR003834 Cytochrome C biogenesis protein, transmembrane domain IPR007157 PspA/IM30 IPR016975 Cell wall-active antibiotic response protein IPR024425 Cell wall-active antibiotics response 4TMS YvqF IPR003660 HAMP domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR017202 Sensor histidine kinase LiaS/VraS IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain IPR003593 AAA+ ATPase domain IPR003959 ATPase, AAA-type, core IPR019489 Clp ATPase, C-terminal IPR036628 Clp, N-terminal domain superfamily IPR004176 Clp, N-terminal IPR001270 ClpA/B family IPR018368 ClpA/B, conserved site 1 IPR028299 ClpA/B, conserved site 2 IPR041546 ClpA/ClpB, AAA lid domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR001943 UVR domain IPR012338 Beta-lactamase/transpeptidase-like IPR001264 Glycosyl transferase, family 51 IPR023346 Lysozyme-like domain superfamily IPR036950 Penicillin binding protein transglycosylase domain IPR001460 Penicillin-binding protein, transpeptidase IPR038071 UROD/MetE-like superfamily IPR006361 Uroporphyrinogen decarboxylase HemE IPR000257 Uroporphyrinogen decarboxylase (URO-D) IPR001015 Ferrochelatase IPR019772 Ferrochelatase, active site IPR033644 Ferrochelatase, C-terminal IPR033659 Ferrochelatase, N-terminal IPR002937 Amine oxidase IPR036188 FAD/NAD(P)-binding domain superfamily IPR004572 Protoporphyrinogen oxidase IPR013785 Aldolase-type TIM barrel IPR004136 Nitronate monooxygenase IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR005889 Nitrate transport permease IPR003593 AAA+ ATPase domain IPR004504 DNA repair protein RadA IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain IPR020568 Ribosomal protein S5 domain 2-type fold IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPR041166 LapB, rubredoxin metal binding domain IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB IPR037100 Sporulation initiation phosphotransferase B, C-terminal domain superfamily IPR039506 SpoOB, alpha-helical domain IPR016122 Sporulation initiation phosphotransferase B, C-terminal IPR031167 OBG-type guanine nucleotide-binding (G) domain IPR035101 GTP-binding protein, Obg-type IPR014100 GTP-binding protein Obg/CgtA IPR036346 GTP-binding protein OBG, C-terminal domain superfamily IPR006074 GTP1/OBG, conserved site IPR006169 GTP1/OBG domain IPR036726 GTP1/OBG domain superfamily IPR006073 GTP binding domain IPR015349 GTP-binding protein OBG, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005225 Small GTP-binding protein domain IPR002912 ACT domain IPR008310 UPF0735 ACT domain-containing protein IPR002912 ACT domain IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase IPR001086 Prephenate dehydratase IPR018528 Prephenate dehydratase, conserved site IPR035922 3H domain superfamily IPR004173 3H domain IPR013196 Helix-turn-helix, type 11 IPR026043 Transcription repressor NadR IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR000192 Aminotransferase class V domain IPR016454 Cysteine desulfurase IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain IPR036188 FAD/NAD(P)-binding domain superfamily IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal IPR005288 L-aspartate oxidase IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily IPR013785 Aldolase-type TIM barrel IPR004393 Nicotinate-nucleotide pyrophosphorylase IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily IPR002638 Quinolinate phosphoribosyl transferase, C-terminal IPR022412 Quinolinate phosphoribosyl transferase, N-terminal IPR003473 Quinolinate synthetase A IPR036094 Quinolinate synthetase A superfamily IPR023515 Quinolinate synthase A, type 3 IPR038331 DisA, linker domain superfamily IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily IPR018906 DNA integrity scanning, DisA, linker region IPR003390 DNA integrity scanning protein, DisA, N-terminal IPR023763 DNA integrity scanning protein, DisA IPR010994 RuvA domain 2-like IPR018392 LysM domain IPR036779 LysM domain superfamily IPR014248 Spore coat assembly protein SafA IPR015050 Bypass of forespore C, C-terminal IPR038117 Bypass of forespore C, C-terminal domain superfamily IPR015071 Bypass-of-forespore C, N-terminal IPR038118 Bypass-of-forespore C, N-terminal domain superfamily IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 IPR012340 Nucleic acid-binding, OB-fold IPR000085 Bacterial DNA recombination protein RuvA IPR010994 RuvA domain 2-like IPR011114 Holliday junction DNA helicase RuvA, C-terminal IPR036267 RuvA, C-terminal domain superfamily IPR003593 AAA+ ATPase domain IPR041445 RuvB, AAA lid domain IPR004605 DNA helicase, Holliday junction RuvB-type IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR008824 RuvB-like P-loop domain IPR008823 RuvB C-terminal winged helix domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR021320 Protein of unknown function DUF2905 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA IPR042118 QueA, domain 1 IPR042119 QueA, domain 2 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily IPR004803 tRNA-guanine transglycosylase IPR036511 Queuine tRNA-ribosyltransferase-like IPR002616 tRNA-guanine(15) transglycosylase-like IPR003849 Preprotein translocase YajC IPR023804 Protein of unknown function DUF3792, transmembrane IPR029060 PIN-like domain superfamily IPR002716 PIN domain IPR002792 TRAM domain IPR000802 Arsenical pump membrane protein, ArsB IPR004680 Citrate transporter-like domain IPR007353 Protein of unknown function DUF421 IPR023090 UPF0702, alpha/beta domain superfamily IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type IPR029303 Polysaccharide biosynthesis protein, C-terminal domain IPR002797 Polysaccharide biosynthesis protein IPR014249 Sporulation stage V protein B IPR005791 Protein translocase subunit SecD IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial IPR022645 Protein-export membrane protein SecD/SecF, bacterial IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site IPR005665 Protein-export membrane protein SecF, bacterial IPR005791 Protein translocase subunit SecD IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial IPR022645 Protein-export membrane protein SecD/SecF, bacterial IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site IPR005665 Protein-export membrane protein SecF, bacterial IPR002524 Cation efflux protein IPR027470 Cation efflux protein, cytoplasmic domain IPR036837 Cation efflux protein, cytoplasmic domain superfamily IPR027469 Cation efflux transmembrane domain superfamily IPR002524 Cation efflux protein IPR027470 Cation efflux protein, cytoplasmic domain IPR036837 Cation efflux protein, cytoplasmic domain superfamily IPR027469 Cation efflux transmembrane domain superfamily IPR010445 Lipopolysaccharide assembly protein A domain IPR001667 DDH domain IPR038763 DHH phosphoesterase superfamily IPR003156 DHHA1 domain IPR004610 Bacterial RecJ exonuclease IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal IPR041122 RecJ, OB domain IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IPR034683 Cytidylyltransferase IspD/TarI IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site IPR029044 Nucleotide-diphospho-sugar transferases IPR005764 Adenine phosphoribosyl transferase IPR000836 Phosphoribosyltransferase domain IPR029057 Phosphoribosyltransferase-like IPR002912 ACT domain IPR012675 Beta-grasp domain superfamily IPR003607 HD/PDEase domain IPR004811 RelA/SpoT family IPR007685 RelA/SpoT IPR004095 TGS IPR012676 TGS-like IPR033655 RelA, TGS domain IPR003732 D-aminoacyl-tRNA deacylase DTD IPR023509 D-aminoacyl-tRNA deacylase-like superfamily IPR006059 Bacterial extracellular solute-binding protein IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR004104 Oxidoreductase, C-terminal IPR008354 Glucose-fructose oxidoreductase, bacterial IPR036291 NAD(P)-binding domain superfamily IPR000683 Oxidoreductase, N-terminal IPR006311 Twin-arginine translocation pathway, signal sequence IPR036237 Xylose isomerase-like superfamily IPR013022 Xylose isomerase-like, TIM barrel domain IPR000843 LacI-type HTH domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR028082 Periplasmic binding protein-like I IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily IPR006195 Aminoacyl-tRNA synthetase, class II IPR004154 Anticodon-binding IPR036621 Anticodon-binding domain superfamily IPR015807 Histidine-tRNA ligase IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit IPR033656 Histidyl-anticodon-binding IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) IPR006195 Aminoacyl-tRNA synthetase, class II IPR004524 Aspartate-tRNA ligase, type 1 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb IPR004115 GAD-like domain superfamily IPR029351 GAD domain IPR012340 Nucleic acid-binding, OB-fold IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type IPR002912 ACT domain IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding IPR016204 Homoserine dehydrogenase IPR001342 Homoserine dehydrogenase, catalytic IPR019811 Homoserine dehydrogenase, conserved site IPR036291 NAD(P)-binding domain superfamily IPR002912 ACT domain IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding IPR016204 Homoserine dehydrogenase IPR001342 Homoserine dehydrogenase, catalytic IPR019811 Homoserine dehydrogenase, conserved site IPR036291 NAD(P)-binding domain superfamily IPR000594 THIF-type NAD/FAD binding fold IPR035985 Ubiquitin-activating enzyme IPR014243 Transcription factor, RsfA IPR017877 Myb-like domain IPR003593 AAA+ ATPase domain IPR032423 AAA C-terminal domain IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal IPR021886 MgsA AAA+ ATPase C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR008824 RuvB-like P-loop domain IPR038750 Uncharacterized protein YczE/YyaS-like IPR030489 Transcription regulator Rrf2-type, conserved site IPR000944 Transcription regulator Rrf2-type IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR000192 Aminotransferase class V domain IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IPR016454 Cysteine desulfurase IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial IPR000924 Glutamyl/glutaminyl-tRNA synthetase IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain IPR033910 Glutamyl-tRNA synthetase IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR023382 Adenine nucleotide alpha hydrolase-like domains IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR004506 tRNA-specific 2-thiouridylase IPR003593 AAA+ ATPase domain IPR006345 RecD-like DNA helicase IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR029493 RecD helicase-like helix-hairpin-helix domain IPR041451 RecD-like DNA helicase, SH3 domain IPR027785 UvrD-like helicase C-terminal domain IPR027275 PRC-barrel domain IPR011033 PRC-barrel-like superfamily IPR002549 Transmembrane protein TqsA-like IPR002318 Alanine-tRNA ligase, class IIc IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily IPR018165 Alanyl-tRNA synthetase, class IIc, core domain IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal IPR023033 Alanine-tRNA ligase, eukaryota/bacteria IPR003156 DHHA1 domain IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily IPR009000 Translation protein, beta-barrel domain superfamily IPR012947 Threonyl/alanyl tRNA synthetase, SAD IPR009309 IreB regulatory phosphoprotein IPR012337 Ribonuclease H-like superfamily IPR005227 Putative pre-16S rRNA nuclease IPR006641 YqgF/RNase H-like domain IPR037027 YqgF/RNase H-like domain superfamily IPR009711 Uncharacterised protein family UPF0473 IPR001451 Hexapeptide repeat IPR018357 Hexapeptide transferase, conserved site IPR010493 Serine acetyltransferase, N-terminal IPR042122 Serine acetyltransferase, N-terminal domain superfamily IPR005881 Serine O-acetyltransferase IPR011004 Trimeric LpxA-like superfamily IPR003770 Endolytic murein transglycosylase IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR002935 Class I-like SAM-dependent O-methyltransferase IPR001539 Peptidase U32 IPR001539 Peptidase U32 IPR032525 Peptidase family U32, C-terminal IPR003593 AAA+ ATPase domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR006083 Phosphoribulokinase/uridine kinase IPR026008 Uridine kinase IPR000764 Uridine kinase-like IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily IPR018151 Transcription elongation factor, GreA/GreB, conserved site IPR006359 Transcription elongation factor GreA IPR028624 Transcription elongation factor GreA/GreB IPR001437 Transcription elongation factor, GreA/GreB, C-terminal IPR023459 Transcription elongation factor GreA/GreB family IPR022691 Transcription elongation factor, GreA/GreB, N-terminal IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily IPR010049 MTA/SAH nucleosidase IPR000845 Nucleoside phosphorylase domain IPR035994 Nucleoside phosphorylase superfamily IPR015803 Cysteine-tRNA ligase IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR032678 tRNA synthetases class I, catalytic domain IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IPR001463 Sodium:alanine symporter IPR014284 RNA polymerase sigma-70 like domain IPR014209 RNA polymerase sigma-K type IPR000943 RNA polymerase sigma-70 IPR007627 RNA polymerase sigma-70 region 2 IPR007630 RNA polymerase sigma-70 region 4 IPR013325 RNA polymerase sigma factor, region 2 IPR013324 RNA polymerase sigma factor, region 3/4-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR001387 Cro/C1-type helix-turn-helix domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR007353 Protein of unknown function DUF421 IPR023090 UPF0702, alpha/beta domain superfamily IPR007353 Protein of unknown function DUF421 IPR023090 UPF0702, alpha/beta domain superfamily IPR008226 Mini-ribonuclease 3 family IPR000999 Ribonuclease III domain IPR036389 Ribonuclease III, endonuclease domain superfamily IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain IPR007730 Sporulation-like domain IPR036680 Sporulation-like domain superfamily IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain IPR007730 Sporulation-like domain IPR036680 Sporulation-like domain superfamily IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR029028 Alpha/beta knot methyltransferases IPR029064 50S ribosomal protein L30e-like IPR004441 RNA methyltransferase TrmH family IPR001537 tRNA/rRNA methyltransferase, SpoU type IPR013123 RNA 2-O ribose methyltransferase, substrate binding IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IPR005084 Carbohydrate binding module family 6 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily IPR008979 Galactose-binding-like domain superfamily IPR013319 Glycoside hydrolase family 11/12 IPR018208 Glycoside hydrolase family 11, active site 1 IPR033119 Glycoside hydrolase family 11, active site 2 IPR033123 Glycosyl hydrolases family 11 (GH11) domain IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel IPR001137 Glycoside hydrolase family 11 IPR002509 NodB homology domain IPR004302 Cellulose/chitin-binding protein, N-terminal IPR041029 N-acetylglucosamine binding protein A domain 2 IPR020879 N-acetylglucosamine-binding protein A IPR014756 Immunoglobulin E-set IPR018028 Catalase, mono-functional, haem-containing IPR024708 Catalase active site IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 IPR011614 Catalase core domain IPR037060 Catalase core domain superfamily IPR002226 Catalase haem-binding site IPR010582 Catalase immune-responsive domain IPR020835 Catalase superfamily IPR000119 Histone-like DNA-binding protein IPR020816 Histone-like DNA-binding protein, conserved site IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase IPR000462 CDP-alcohol phosphatidyltransferase IPR010298 Protein of unknown function DUF901 IPR003817 Phosphatidylserine decarboxylase-related IPR033177 Phosphatidylserine decarboxylase IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 IPR005133 Na+/H+ antiporter subunit G IPR007208 Na(+)/H(+) antiporter subunit F-like IPR002758 Na+/H+ antiporter subunit E IPR003918 NADH:ubiquinone oxidoreductase IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like IPR007182 Na+/H+ antiporter MnhB subunit-related protein IPR025383 Domain of unknown function DUF4040 IPR005663 Monovalent cation proton antiporter subunit A IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal IPR014284 RNA polymerase sigma-70 like domain IPR014218 RNA polymerase sigma-H type IPR016371 RNA polymerase sigma-H factor IPR000943 RNA polymerase sigma-70 IPR007627 RNA polymerase sigma-70 region 2 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 IPR013325 RNA polymerase sigma factor, region 2 IPR013324 RNA polymerase sigma factor, region 3/4-like IPR000792 Transcription regulator LuxR, C-terminal IPR015064 Sporulation inhibitor A IPR036916 Sporulation inhibitor A superfamily IPR015064 Sporulation inhibitor A IPR036916 Sporulation inhibitor A superfamily IPR036412 HAD-like superfamily IPR006439 HAD hydrolase, subfamily IA IPR006549 HAD-superfamily hydrolase,subfamily IIIA IPR023214 HAD superfamily IPR010021 HAD-superfamily phosphatase, YqeG-like IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain IPR019988 GTP-binding protein, riobosome biogenesis, YqeH IPR006073 GTP binding domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR036291 NAD(P)-binding domain superfamily IPR041121 SDH, C-terminal IPR011342 Shikimate dehydrogenase IPR013708 Shikimate dehydrogenase substrate binding, N-terminal IPR022893 Shikimate dehydrogenase family IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase IPR001890 RNA-binding, CRM domain IPR017924 RNA-binding protein YhbY IPR035920 YhbY-like superfamily IPR004821 Cytidyltransferase-like domain IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR005249 Conserved hypothetical protein CHP00488 IPR003607 HD/PDEase domain IPR006674 HD domain IPR004394 Protein Iojap/ribosomal silencing factor RsfS IPR014464 Conserved virulence factor B IPR039566 Conserved virulence factor B, S1 domain IPR040764 Conserved virulence factor B-like, winged helix domain IPR012340 Nucleic acid-binding, OB-fold IPR022967 RNA-binding domain, S1 IPR003029 S1 domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR041698 Methyltransferase domain 25 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR038584 Ribosomal protein L33 superfamily IPR001705 Ribosomal protein L33 IPR011332 Zinc-binding ribosomal protein IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPR036291 NAD(P)-binding domain superfamily IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain IPR000304 Pyrroline-5-carboxylate reductase IPR019688 Protein of unknown function DUF2533 IPR004787 Competence protein ComEA IPR004509 Competence protein ComEA, helix-hairpin-helix domain IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 IPR010994 RuvA domain 2-like IPR019554 Soluble ligand binding domain IPR016192 APOBEC/CMP deaminase, zinc-binding IPR002125 Cytidine and deoxycytidylate deaminase domain IPR013404 Competence operon E, ComEB IPR016193 Cytidine deaminase-like IPR015517 Deoxycytidylate deaminase-related IPR035105 Deoxycytidylate deaminase domain IPR035681 ComA-like, MBL domain IPR004477 ComEC/Rec2-related protein IPR004797 Competence protein ComEC/Rec2 IPR025405 Domain of unknown function DUF4131 IPR001279 Metallo-beta-lactamase IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPR025416 YqzM-like protein IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal IPR010372 DNA polymerase III delta, N-terminal IPR005790 DNA polymerase III, delta subunit IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR002583 Ribosomal protein S20 IPR036510 Ribosomal protein S20 superfamily IPR023430 Peptidase HybD-like domain superfamily IPR005080 Peptidase A25, germination protease IPR005807 SecE subunit of protein translocation complex, bacterial-like IPR038379 SecE superfamily IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit IPR006297 Elongation factor 4 IPR041095 Elongation Factor G, domain II IPR035647 EF-G domain III/V-like IPR000640 Elongation factor EFG, domain V-like IPR004161 Translation elongation factor EFTu-like, domain 2 IPR031157 Tr-type G domain, conserved site IPR038363 LepA, C-terminal domain superfamily IPR013842 GTP-binding protein LepA, C-terminal IPR035654 Elongation factor 4, domain IV IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005225 Small GTP-binding protein domain IPR000795 Transcription factor, GTP-binding domain IPR009000 Translation protein, beta-barrel domain superfamily IPR034505 Anaerobic coproporphyrinogen-III oxidase IPR006638 Elp3/MiaB/NifB IPR010723 HemN, C-terminal IPR004559 Heme chaperone HemW-like IPR007197 Radical SAM IPR023404 Radical SAM, alpha/beta horseshoe IPR029016 GAF-like domain superfamily IPR002571 Heat-inducible transcription repressor HrcA IPR021153 Heat-inducible transcription repressor HrcA, C-terminal IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily IPR000740 GrpE nucleotide exchange factor IPR013805 GrpE nucleotide exchange factor, coiled-coil IPR009012 GrpE nucleotide exchange factor, head IPR012725 Chaperone DnaK IPR018181 Heat shock protein 70, conserved site IPR029048 Heat shock protein 70kD, C-terminal domain superfamily IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily IPR013126 Heat shock protein 70 family IPR012724 Chaperone DnaJ IPR002939 Chaperone DnaJ, C-terminal IPR001623 DnaJ domain IPR018253 DnaJ domain, conserved site IPR008971 HSP40/DnaJ peptide-binding IPR001305 Heat shock protein DnaJ, cysteine-rich domain IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily IPR036869 Chaperone J-domain superfamily IPR004498 Ribosomal protein L11 methyltransferase IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR029028 Alpha/beta knot methyltransferases IPR015947 PUA-like superfamily IPR006700 Ribosomal RNA small subunit methyltransferase E IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IPR005824 KOW IPR006645 NusG, N-terminal IPR036735 NusG, N-terminal domain superfamily IPR014722 Ribosomal protein L2, domain 2 IPR001062 Transcription antitermination protein, NusG IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site IPR008991 Translation protein SH3-like domain superfamily IPR006638 Elp3/MiaB/NifB IPR005839 Methylthiotransferase IPR020612 Methylthiotransferase, conserved site IPR013848 Methylthiotransferase, N-terminal IPR038135 Methylthiotransferase, N-terminal domain superfamily IPR006467 MiaB-like tRNA modifying enzyme IPR007197 Radical SAM IPR023404 Radical SAM, alpha/beta horseshoe IPR034557 Threonylcarbamoyladenosine tRNA methylthiotransferase IPR002792 TRAM domain IPR013785 Aldolase-type TIM barrel IPR011343 Deoxyribose-phosphate aldolase IPR002915 DeoC/FbaB/ lacD aldolase IPR028581 Deoxyribose-phosphate aldolase type I IPR003841 Sodium-dependent phosphate transport protein IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein IPR001911 Ribosomal protein S21 IPR018278 Ribosomal protein S21, conserved site IPR038380 Ribosomal protein S21 superfamily IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 IPR019004 Uncharacterised protein YqeY/Aim41 IPR042184 YqeY/Aim41, N-terminal domain IPR029045 ClpP/crotonase-like domain superfamily IPR002810 NfeD-like, C-terminal domain IPR002825 Peptidase S49, serine-peptidase prokaryotes IPR022853 Uncharacterised protein family YdfA-immunity IPR022476 Sporulation protein YabP/YqfC IPR022477 Sporulation protein YqfC IPR010690 Putative stage IV sporulation YqfD IPR000911 Ribosomal protein L11/L12 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily IPR006519 Ribosomal protein L11, bacterial-type IPR020783 Ribosomal protein L11, C-terminal IPR036769 Ribosomal protein L11, C-terminal domain superfamily IPR020785 Ribosomal protein L11, conserved site IPR020784 Ribosomal protein L11, N-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003714 PhoH-like protein IPR003607 HD/PDEase domain IPR006674 HD domain IPR006675 HDIG domain IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain IPR023091 Metalloprotease catalytic domain superfamily, predicted IPR002036 Endoribonuclease YbeY IPR020549 Endoribonuclease YbeY, conserved site IPR000829 DAGK family IPR036945 Diacylglycerol kinase (DAGK) superfamily IPR033717 Undecaprenol kinase IPR016192 APOBEC/CMP deaminase, zinc-binding IPR002125 Cytidine and deoxycytidylate deaminase domain IPR006262 Cytidine deaminase, homotetrameric IPR016193 Cytidine deaminase-like IPR030388 Era-type guanine nucleotide-binding (G) domain IPR005662 GTP-binding protein Era IPR006073 GTP binding domain IPR015946 K homology domain-like, alpha/beta IPR004044 K Homology domain, type 2 IPR009019 K homology domain superfamily, prokaryotic type IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005225 Small GTP-binding protein domain IPR025617 YqzL-like protein IPR037278 ARFGAP/RecO-like zinc finger IPR022572 DNA replication/recombination mediator RecO, N-terminal IPR012340 Nucleic acid-binding, OB-fold IPR003717 Recombination protein O, RecO IPR042242 Recombination protein O, zinc-binding domain IPR006194 Glycine-tRNA synthetase, heterodimeric IPR002310 Glycine-tRNA ligase, alpha subunit IPR005878 Ribosomal protein L1, bacterial-type IPR002143 Ribosomal protein L1 IPR023674 Ribosomal protein L1-like IPR028364 Ribosomal protein L1/ribosomal biogenesis protein IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich IPR023673 Ribosomal protein L1, conserved site IPR008909 DALR anticodon binding IPR015944 Glycine-tRNA ligase, beta subunit IPR006194 Glycine-tRNA synthetase, heterodimeric IPR000644 CBS domain IPR013196 Helix-turn-helix, type 11 IPR016842 Protein of unknown function UCP026546, HtH-CBS IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR005177 Bifunctional kinase-pyrophosphorylase IPR026565 Putative pyruvate, phosphate dikinase regulatory protein IPR003791 Protein of unknown function UPF0178 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal IPR013264 DNA primase, catalytic core, N-terminal IPR037068 DNA primase, catalytic core, N-terminal domain superfamily IPR019475 DNA primase, DnaB-helicase binding domain IPR006295 DNA primase, DnaG IPR036977 DNA Primase, CHC2-type zinc finger IPR030846 DNA primase DnaG, bacteria IPR034151 Bacterial DnaG primase, TOPRIM domain IPR006171 TOPRIM domain IPR002694 Zinc finger, CHC2-type IPR014284 RNA polymerase sigma-70 like domain IPR000943 RNA polymerase sigma-70 IPR009042 RNA polymerase sigma-70 region 1.2 IPR007627 RNA polymerase sigma-70 region 2 IPR007624 RNA polymerase sigma-70 region 3 IPR007630 RNA polymerase sigma-70 region 4 IPR007127 RNA polymerase sigma factor 70, region 1.1 IPR042189 Sigma-70 factor, region 1.1 superfamily IPR013325 RNA polymerase sigma factor, region 2 IPR013324 RNA polymerase sigma factor, region 3/4-like IPR012760 RNA polymerase sigma factor RpoD, C-terminal IPR028630 RNA polymerase sigma factor RpoD IPR036388 Winged helix-like DNA-binding domain superfamily IPR009056 Cytochrome c-like domain IPR036909 Cytochrome c-like domain superfamily IPR012218 Cytochrome c, Bacillus subtilis c550-related IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR006901 tRNA methyltransferase TrmK IPR002678 GTP cyclohydrolase 1 type 2/Nif3 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal IPR022973 Ribosomal protein L10 IPR002363 Ribosomal protein L10, eubacterial, conserved site IPR001790 Ribosomal protein L10P IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IPR036101 CarD-like/TRCF domain superfamily IPR003711 CarD-like/TRCF domain IPR042215 CarD-like, C-terminal domain IPR036101 CarD-like/TRCF domain superfamily IPR003711 CarD-like/TRCF domain IPR042215 CarD-like, C-terminal domain IPR030881 DEAD-box ATP-dependent RNA helicase CshB IPR011545 DEAD/DEAH box helicase domain IPR014001 Helicase superfamily 1/2, ATP-binding domain IPR001650 Helicase, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR014014 RNA helicase, DEAD-box type, Q motif IPR001719 AP endonuclease 2 IPR018246 AP endonuclease 2, zinc binding site IPR036237 Xylose isomerase-like superfamily IPR013022 Xylose isomerase-like, TIM barrel domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR000014 PAS domain IPR035965 PAS domain superfamily IPR013767 PAS fold IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR000014 PAS domain IPR035965 PAS domain superfamily IPR013767 PAS fold IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR037294 ABC transporter, BtuC-like IPR001626 ABC transporter, TroCD-like IPR000206 Ribosomal protein L7/L12 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like IPR013823 Ribosomal protein L7/L12, C-terminal IPR008932 Ribosomal protein L7/L12, oligomerisation IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily IPR003414 Polyphosphate kinase IPR041108 Polyphosphate kinase, C-terminal domain 1 IPR024953 Polyphosphate kinase middle domain IPR036830 Polyphosphate kinase middle domain superfamily IPR025200 Polyphosphate kinase C-terminal domain 2 IPR025198 Polyphosphate kinase N-terminal domain IPR036832 Polyphosphate kinase N-terminal domain superfamily IPR003695 Ppx/GppA phosphatase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR037294 ABC transporter, BtuC-like IPR001626 ABC transporter, TroCD-like IPR002481 Ferric-uptake regulator IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR010070 Sporulation protein YjcZ-like IPR010708 5'(3')-deoxyribonucleotidase IPR036412 HAD-like superfamily IPR023214 HAD superfamily IPR009206 Nucleotidase, putative IPR011005 Dihydropteroate synthase-like IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG IPR009343 Protein of unknown function DUF1002 IPR028366 Phosphate transport system protein PhoU IPR038078 PhoU-like domain superfamily IPR026022 PhoU domain IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR007848 Methyltransferase small domain IPR001189 Manganese/iron superoxide dismutase IPR019833 Manganese/iron superoxide dismutase, binding site IPR019832 Manganese/iron superoxide dismutase, C-terminal IPR019831 Manganese/iron superoxide dismutase, N-terminal IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily IPR011701 Major facilitator superfamily IPR036259 MFS transporter superfamily IPR012338 Beta-lactamase/transpeptidase-like IPR005311 Penicillin-binding protein, dimerisation domain IPR036138 Penicillin-binding protein, dimerisation domain superfamily IPR001460 Penicillin-binding protein, transpeptidase IPR012338 Beta-lactamase/transpeptidase-like IPR005311 Penicillin-binding protein, dimerisation domain IPR036138 Penicillin-binding protein, dimerisation domain superfamily IPR001460 Penicillin-binding protein, transpeptidase IPR001296 Glycosyl transferase, family 1 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain IPR037538 UTP--glucose-1-phosphate uridylyltransferase, cyanobacteria IPR005835 Nucleotidyl transferase domain IPR029044 Nucleotide-diphospho-sugar transferases IPR002698 5-formyltetrahydrofolate cyclo-ligase IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily IPR037171 NagB/RpiA transferase-like IPR000594 THIF-type NAD/FAD binding fold IPR035985 Ubiquitin-activating enzyme IPR022764 Peptidase S54, rhomboid domain IPR035952 Rhomboid-like superfamily IPR013026 Tetratricopeptide repeat-containing domain IPR011990 Tetratricopeptide-like helical domain superfamily IPR019734 Tetratricopeptide repeat IPR004995 Bacillus/Clostridium Ger spore germination protein IPR004995 Bacillus/Clostridium Ger spore germination protein IPR000600 ROK family IPR004654 Glucokinase ROK IPR000600 ROK family IPR004654 Glucokinase ROK IPR004708 Aspartate ammonia-lyase IPR024083 Fumarase/histidase, N-terminal IPR018951 Fumarase C, C-terminal IPR020557 Fumarate lyase, conserved site IPR000362 Fumarate lyase family IPR022761 Fumarate lyase, N-terminal IPR008948 L-Aspartase-like IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain IPR015712 DNA-directed RNA polymerase, subunit 2 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type IPR007121 RNA polymerase, beta subunit, conserved site IPR007644 RNA polymerase, beta subunit, protrusion IPR007642 RNA polymerase Rpb2, domain 2 IPR037034 RNA polymerase Rpb2, domain 2 superfamily IPR007645 RNA polymerase Rpb2, domain 3 IPR007641 RNA polymerase Rpb2, domain 7 IPR014724 RNA polymerase Rpb2, OB-fold IPR036188 FAD/NAD(P)-binding domain superfamily IPR023753 FAD/NAD(P)-binding domain IPR022890 Ferredoxin--NADP reductase, type 2 IPR036188 FAD/NAD(P)-binding domain superfamily IPR023753 FAD/NAD(P)-binding domain IPR022890 Ferredoxin--NADP reductase, type 2 IPR013785 Aldolase-type TIM barrel IPR036206 Thiamin phosphate synthase superfamily IPR022998 Thiamine phosphate synthase/TenI IPR034291 Thiamine phosphate synthase IPR013785 Aldolase-type TIM barrel IPR033983 Thiazole synthase ThiG IPR008867 Thiazole synthase IPR006076 FAD dependent oxidoreductase IPR036188 FAD/NAD(P)-binding domain superfamily IPR012727 Glycine oxidase ThiO IPR006076 FAD dependent oxidoreductase IPR036188 FAD/NAD(P)-binding domain superfamily IPR012727 Glycine oxidase ThiO IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase IPR029056 Ribokinase-like IPR012754 DNA-directed RNA polymerase, subunit beta-prime IPR000722 RNA polymerase, alpha subunit IPR006592 RNA polymerase, N-terminal IPR007080 RNA polymerase Rpb1, domain 1 IPR007066 RNA polymerase Rpb1, domain 3 IPR042102 RNA polymerase Rpb1, domain 3 superfamily IPR007083 RNA polymerase Rpb1, domain 4 IPR007081 RNA polymerase Rpb1, domain 5 IPR038120 RNA polymerase Rpb1, funnel domain superfamily IPR029756 MTH1187/YkoF-like IPR002767 Thiamine-binding protein IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR039143 Glucosamine 6-phosphate N-acetyltransferase IPR009097 Cyclic phosphodiesterase IPR022932 Putative phosphoesterase YjcG IPR029058 Alpha/Beta hydrolase fold IPR000801 Putative esterase IPR036681 PgpA-like superfamily IPR026038 Putative phosphatidylglycerophosphatase IPR007686 YutG/PgpA domain IPR036681 PgpA-like superfamily IPR026038 Putative phosphatidylglycerophosphatase IPR007686 YutG/PgpA domain IPR001387 Cro/C1-type helix-turn-helix domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR005677 Fumarate hydratase, class II IPR024083 Fumarase/histidase, N-terminal IPR018951 Fumarase C, C-terminal IPR020557 Fumarate lyase, conserved site IPR000362 Fumarate lyase family IPR022761 Fumarate lyase, N-terminal IPR008948 L-Aspartase-like IPR008276 Concentrative nucleoside transporter IPR018270 Concentrative nucleoside transporter, metazoan/bacterial IPR011657 Concentrative nucleoside transporter C-terminal domain IPR002668 Concentrative nucleoside transporter N-terminal domain IPR029064 50S ribosomal protein L30e-like IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 IPR000948 Ribosomal protein L7Ae, prokaryotes IPR023460 Ribosomal protein L7Ae, putative IPR028427 Peptide methionine sulfoxide reductase IPR002579 Peptide methionine sulphoxide reductase MrsB IPR011057 Mss4-like superfamily IPR002569 Peptide methionine sulphoxide reductase MsrA IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR004761 Spore germination GerAB IPR004761 Spore germination GerAB IPR004995 Bacillus/Clostridium Ger spore germination protein IPR004995 Bacillus/Clostridium Ger spore germination protein IPR004995 Bacillus/Clostridium Ger spore germination protein IPR012340 Nucleic acid-binding, OB-fold IPR006032 Ribosomal protein S12/S23 IPR005679 Ribosomal protein S12, bacterial-type IPR018093 BCCT transporter, conserved site IPR000060 BCCT transporter family IPR018093 BCCT transporter, conserved site IPR000060 BCCT transporter family IPR002781 Transmembrane protein TauE-like IPR002781 Transmembrane protein TauE-like IPR001320 Ionotropic glutamate receptor IPR018313 Solute-binding protein family 3, conserved site IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR003593 AAA+ ATPase domain IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR010343 Aromatic acid exporter family member 1 IPR021062 Putative aromatic acid exporter, C-terminal IPR038323 Putative aromatic acid exporter, C-terminal domain superfamily IPR005490 L,D-transpeptidase catalytic domain IPR038063 L,D-transpeptidase catalytic domain-like IPR000235 Ribosomal protein S5/S7 IPR005717 Ribosomal protein S7, bacterial/organellar-type IPR020606 Ribosomal protein S7, conserved site IPR023798 Ribosomal protein S7 domain IPR036823 Ribosomal protein S7 domain superfamily IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IPR018146 Glyoxalase I, conserved site IPR017515 Methylmalonyl-CoA epimerase IPR037523 Vicinal oxygen chelate (VOC) domain IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site IPR036264 Bacterial exopeptidase dimerisation domain IPR010162 Peptidase M20B, peptidase T-like IPR002933 Peptidase M20 IPR011650 Peptidase M20, dimerisation domain IPR008007 Peptidase M42 IPR036775 DNA polymerase, Y-family, little finger domain superfamily IPR017961 DNA polymerase, Y-family, little finger domain IPR022880 DNA polymerase IV IPR001126 UmuC domain IPR004683 Type III secretion system substrate exporter FlhB-like IPR006135 Type III secretion system substrate exporter IPR029025 Type III secretion system substrate exporter, C-terminal IPR004683 Type III secretion system substrate exporter FlhB-like IPR006135 Type III secretion system substrate exporter IPR029025 Type III secretion system substrate exporter, C-terminal IPR003713 Flagellar protein FliS IPR036584 Flagellar protein FliS superfamily IPR041095 Elongation Factor G, domain II IPR009022 Elongation factor G, domain III IPR035647 EF-G domain III/V-like IPR035649 EFG, domain V IPR000640 Elongation factor EFG, domain V-like IPR004161 Translation elongation factor EFTu-like, domain 2 IPR031157 Tr-type G domain, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR020568 Ribosomal protein S5 domain 2-type fold IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPR005225 Small GTP-binding protein domain IPR000795 Transcription factor, GTP-binding domain IPR009000 Translation protein, beta-barrel domain superfamily IPR004540 Translation elongation factor EFG/EF2 IPR005517 Translation elongation factor EFG/EF2, domain IV IPR001492 Flagellin IPR042187 Flagellin, C-terminal domain, subdomain 2 IPR001029 Flagellin, D0/D1 domain IPR005585 Protein of unknown function DUF327 IPR024042 TM1646-like domain superfamily IPR013785 Aldolase-type TIM barrel IPR023663 NADPH dehydrogenase IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal IPR011798 Adenosine 5'-phosphosulphate reductase IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase IPR002500 Phosphoadenosine phosphosulphate reductase IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain IPR004161 Translation elongation factor EFTu-like, domain 2 IPR033720 Elongation factor Tu, domain 2 IPR031157 Tr-type G domain, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005225 Small GTP-binding protein domain IPR000795 Transcription factor, GTP-binding domain IPR009000 Translation protein, beta-barrel domain superfamily IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle IPR004160 Translation elongation factor EFTu/EF1A, C-terminal IPR025980 ATP-sulfurylase PUA-like domain IPR015947 PUA-like superfamily IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR020792 Sulphate adenylyltransferase, prokaryotic-type IPR024951 Sulphate adenylyltransferase catalytic domain IPR002650 Sulphate adenylyltransferase IPR001204 Phosphate transporter IPR002891 Adenylyl-sulfate kinase IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR000209 Peptidase S8/S53 domain IPR036852 Peptidase S8/S53 domain superfamily IPR023827 Peptidase S8, subtilisin, Asp-active site IPR022398 Peptidase S8, subtilisin, His-active site IPR023828 Peptidase S8, subtilisin, Ser-active site IPR015500 Peptidase S8, subtilisin-related IPR034084 Thermitase-like, domain IPR006837 Divergent polysaccharide deacetylase IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel IPR036188 FAD/NAD(P)-binding domain superfamily IPR023753 FAD/NAD(P)-binding domain IPR022890 Ferredoxin--NADP reductase, type 2 IPR009061 Putative DNA-binding domain superfamily IPR000551 MerR-type HTH domain IPR009061 Putative DNA-binding domain superfamily IPR000551 MerR-type HTH domain IPR000878 Tetrapyrrole methylase IPR035996 Tetrapyrrole methylase superfamily IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily IPR014777 Tetrapyrrole methylase, subdomain 1 IPR014776 Tetrapyrrole methylase, subdomain 2 IPR006366 Uroporphyrin-III C-methyltransferase IPR003043 Uroporphiryn-III C-methyltransferase, conserved site IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX IPR001848 Ribosomal protein S10 IPR018268 Ribosomal protein S10, conserved site IPR027486 Ribosomal protein S10 domain IPR036838 Ribosomal protein S10 domain superfamily IPR000878 Tetrapyrrole methylase IPR035996 Tetrapyrrole methylase superfamily IPR014777 Tetrapyrrole methylase, subdomain 1 IPR014776 Tetrapyrrole methylase, subdomain 2 IPR006366 Uroporphyrin-III C-methyltransferase IPR036291 NAD(P)-binding domain superfamily IPR037115 Sirohaem synthase, dimerisation domain superfamily IPR012409 Sirohaem synthase IPR028281 Siroheme synthase, central domain IPR019478 Sirohaem synthase, dimerisation domain IPR006367 Sirohaem synthase, N-terminal IPR003043 Uroporphiryn-III C-methyltransferase, conserved site IPR036393 Acetylglutamate kinase-like superfamily IPR002912 ACT domain IPR035804 Aspartokinase 3, N-terminal IPR001048 Aspartate/glutamate/uridylate kinase IPR005260 Aspartate kinase, monofunctional class IPR001341 Aspartate kinase IPR018042 Aspartate kinase, conserved site IPR027795 CASTOR, ACT domain IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPR036291 NAD(P)-binding domain superfamily IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain IPR000304 Pyrroline-5-carboxylate reductase IPR016161 Aldehyde/histidinol dehydrogenase IPR016163 Aldehyde dehydrogenase, C-terminal IPR016162 Aldehyde dehydrogenase, N-terminal IPR015590 Aldehyde dehydrogenase domain IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site IPR012134 Glutamate-5-semialdehyde dehydrogenase IPR000965 GPR domain IPR036393 Acetylglutamate kinase-like superfamily IPR001048 Aspartate/glutamate/uridylate kinase IPR041739 Glutamate-5-kinase domain IPR001057 Glutamate/acetylglutamate kinase IPR011529 Glutamate 5-kinase IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase IPR019797 Glutamate 5-kinase, conserved site IPR002478 PUA domain IPR015947 PUA-like superfamily IPR036974 PUA domain superfamily IPR036291 NAD(P)-binding domain superfamily IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR002347 Short-chain dehydrogenase/reductase SDR IPR000597 Ribosomal protein L3 IPR019927 Ribosomal protein L3, bacterial/organelle-type IPR019926 Ribosomal protein L3, conserved site IPR009000 Translation protein, beta-barrel domain superfamily IPR006426 Asparagine synthase, glutamine-hydrolyzing IPR001962 Asparagine synthase IPR033738 Asparagine synthase, N-terminal domain IPR017932 Glutamine amidotransferase type 2 domain IPR029055 Nucleophile aminohydrolases, N-terminal IPR004090 Chemotaxis methyl-accepting receptor IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR001610 PAC motif IPR000014 PAS domain IPR000700 PAS-associated, C-terminal IPR035965 PAS domain superfamily IPR013655 PAS fold-3 IPR036291 NAD(P)-binding domain superfamily IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR002347 Short-chain dehydrogenase/reductase SDR IPR036291 NAD(P)-binding domain superfamily IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR002347 Short-chain dehydrogenase/reductase SDR IPR036291 NAD(P)-binding domain superfamily IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR002347 Short-chain dehydrogenase/reductase SDR IPR000836 Phosphoribosyltransferase domain IPR029057 Phosphoribosyltransferase-like IPR010079 Xanthine phosphoribosyltransferase IPR011055 Duplicated hybrid motif IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 IPR006377 Catabolite control protein A IPR000843 LacI-type HTH domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR028082 Periplasmic binding protein-like I IPR002136 Ribosomal protein L4/L1e IPR023574 Ribosomal protein L4 domain superfamily IPR013005 50S ribosomal protein uL4 IPR005524 Predicted permease DUF318 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal IPR003495 CobW/HypB/UreG, nucleotide-binding domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal IPR003495 CobW/HypB/UreG, nucleotide-binding domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003824 Undecaprenyl-diphosphatase UppP IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant IPR036249 Thioredoxin-like superfamily IPR013766 Thioredoxin domain IPR004385 Nucleoside diphosphate pyrophosphatase IPR015797 NUDIX hydrolase-like domain superfamily IPR020084 NUDIX hydrolase, conserved site IPR000086 NUDIX hydrolase domain IPR004385 Nucleoside diphosphate pyrophosphatase IPR015797 NUDIX hydrolase-like domain superfamily IPR020084 NUDIX hydrolase, conserved site IPR000086 NUDIX hydrolase domain IPR005287 Conserved hypothetical protein CHP00375 IPR016195 Polymerase/histidinol phosphatase-like IPR010994 RuvA domain 2-like IPR014196 Stage II sporulation protein M IPR002798 Stage II sporulation protein M-like IPR012677 Nucleotide-binding alpha-beta plait domain superfamily IPR012678 Ribosomal protein L23/L15e core domain superfamily IPR001014 Ribosomal protein L23/L25, conserved site IPR013025 Ribosomal protein L25/L23 IPR002481 Ferric-uptake regulator IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR011010 DNA breaking-rejoining enzyme, catalytic core IPR013762 Integrase-like, catalytic domain superfamily IPR002104 Integrase, catalytic domain IPR010998 Integrase/recombinase, N-terminal IPR004107 Integrase, SAM-like, N-terminal IPR011931 Tyrosine recombinase XerC IPR011932 Tyrosine recombinase XerD IPR023009 Tyrosine recombinase XerC/XerD IPR017850 Alkaline-phosphatase-like, core domain superfamily IPR010045 Phosphopentomutase IPR006124 Metalloenzyme IPR024052 Phosphopentomutase DeoB cap domain superfamily IPR000845 Nucleoside phosphorylase domain IPR035994 Nucleoside phosphorylase superfamily IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific IPR011268 Purine nucleoside phosphorylase IPR018099 Purine phosphorylase, family 2, conserved site IPR000845 Nucleoside phosphorylase domain IPR035994 Nucleoside phosphorylase superfamily IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific IPR011268 Purine nucleoside phosphorylase IPR018099 Purine phosphorylase, family 2, conserved site IPR000312 Glycosyl transferase, family 3 IPR017459 Glycosyl transferase family 3, N-terminal domain IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase IPR013538 Activator of Hsp90 ATPase homologue 1-like IPR023393 START-like domain superfamily IPR012338 Beta-lactamase/transpeptidase-like IPR015956 Penicillin-binding protein, C-terminal domain superfamily IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal IPR003658 Anti-sigma factor antagonist IPR014237 Anti-sigma F factor antagonist IPR002645 STAS domain IPR036513 STAS domain superfamily IPR012340 Nucleic acid-binding, OB-fold IPR022666 Ribosomal Proteins L2, RNA binding domain IPR014722 Ribosomal protein L2, domain 2 IPR002171 Ribosomal protein L2 IPR005880 Ribosomal protein L2, bacterial/organellar-type IPR022669 Ribosomal protein L2, C-terminal IPR022671 Ribosomal protein L2, conserved site IPR014726 Ribosomal protein L2, domain 3 IPR008991 Translation protein SH3-like domain superfamily IPR010194 Anti-sigma F factor IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR014284 RNA polymerase sigma-70 like domain IPR014322 RNA polymerase sigma-B/F/G type IPR014236 RNA polymerase sigma-F type IPR000943 RNA polymerase sigma-70 IPR007627 RNA polymerase sigma-70 region 2 IPR007624 RNA polymerase sigma-70 region 3 IPR007630 RNA polymerase sigma-70 region 4 IPR013325 RNA polymerase sigma factor, region 2 IPR013324 RNA polymerase sigma factor, region 3/4-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR014203 Sporulation stage V, protein AC IPR005562 SpoVA IPR014203 Sporulation stage V, protein AC IPR005562 SpoVA IPR010894 Stage V sporulation AD IPR038369 Stage V sporulation AD superfamily IPR016039 Thiolase-like IPR010894 Stage V sporulation AD IPR038369 Stage V sporulation AD superfamily IPR016039 Thiolase-like IPR025914 Stage V sporulation protein AE IPR009006 Alanine racemase/group IV decarboxylase, C-terminal IPR002986 Diaminopimelate decarboxylase, LysA IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal IPR000183 Ornithine/DAP/Arg decarboxylase IPR029066 PLP-binding barrel IPR029000 Cyclophilin-like domain superfamily IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain IPR011006 CheY-like superfamily IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR010559 Signal transduction histidine kinase, internal region IPR001789 Signal transduction response regulator, receiver domain IPR011006 CheY-like superfamily IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR010559 Signal transduction histidine kinase, internal region IPR001789 Signal transduction response regulator, receiver domain IPR002222 Ribosomal protein S19/S15 IPR005732 Ribosomal protein S19, bacterial-type IPR020934 Ribosomal protein S19 conserved site IPR023575 Ribosomal protein S19, superfamily IPR001303 Class II aldolase/adducin N-terminal IPR036409 Class II aldolase/adducin N-terminal domain superfamily IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase IPR036291 NAD(P)-binding domain superfamily IPR002347 Short-chain dehydrogenase/reductase SDR IPR000577 Carbohydrate kinase, FGGY IPR018485 Carbohydrate kinase, FGGY, C-terminal IPR018484 Carbohydrate kinase, FGGY, N-terminal IPR013449 Rhamnulokinase IPR009308 Rhamnose isomerase IPR036237 Xylose isomerase-like superfamily IPR014036 DeoR C-terminal sensor domain IPR001034 DeoR-type HTH domain IPR037171 NagB/RpiA transferase-like IPR018356 Transcription regulator, HTH DeoR-type, conserved site IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR016192 APOBEC/CMP deaminase, zinc-binding IPR002125 Cytidine and deoxycytidylate deaminase domain IPR016193 Cytidine deaminase-like IPR024072 Dihydrofolate reductase-like domain superfamily IPR004794 Riboflavin biosynthesis protein RibD IPR011549 Riboflavin-specific deaminase, C-terminal IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily IPR001783 Lumazine-binding protein IPR026017 Lumazine-binding domain IPR017938 Riboflavin synthase-like beta-barrel IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB IPR032677 GTP cyclohydrolase II IPR000926 GTP cyclohydrolase II, RibA IPR036144 RibA-like superfamily IPR016299 Riboflavin biosynthesis protein RibBA IPR034964 Lumazine synthase IPR002180 Lumazine/riboflavin synthase IPR036467 Lumazine/riboflavin synthase superfamily IPR001063 Ribosomal protein L22/L17 IPR018260 Ribosomal protein L22/L17, conserved site IPR036394 Ribosomal protein L22/L17 superfamily IPR005727 Ribosomal protein L22, bacterial/chloroplast-type IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR005500 Protein of unknown function DUF309 IPR023203 TTHA0068-like superfamily IPR003768 Segregation and condensation protein A IPR005234 Chromosome segregation/condensation protein ScpB IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR001189 Manganese/iron superoxide dismutase IPR019833 Manganese/iron superoxide dismutase, binding site IPR019832 Manganese/iron superoxide dismutase, C-terminal IPR019831 Manganese/iron superoxide dismutase, N-terminal IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily IPR007353 Protein of unknown function DUF421 IPR023090 UPF0702, alpha/beta domain superfamily IPR007353 Protein of unknown function DUF421 IPR023090 UPF0702, alpha/beta domain superfamily IPR004087 K Homology domain IPR015946 K homology domain-like, alpha/beta IPR004044 K Homology domain, type 2 IPR009019 K homology domain superfamily, prokaryotic type IPR005704 Ribosomal protein S3, bacterial-type IPR001351 Ribosomal protein S3, C-terminal IPR036419 Ribosomal protein S3, C-terminal domain superfamily IPR018280 Ribosomal protein S3, conserved site IPR014204 Sporulation stage V, protein AE IPR005562 SpoVA IPR007353 Protein of unknown function DUF421 IPR023090 UPF0702, alpha/beta domain superfamily IPR007353 Protein of unknown function DUF421 IPR023090 UPF0702, alpha/beta domain superfamily IPR007353 Protein of unknown function DUF421 IPR023090 UPF0702, alpha/beta domain superfamily IPR007353 Protein of unknown function DUF421 IPR023090 UPF0702, alpha/beta domain superfamily IPR012338 Beta-lactamase/transpeptidase-like IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal IPR012338 Beta-lactamase/transpeptidase-like IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain IPR020103 Pseudouridine synthase, catalytic domain superfamily IPR006145 Pseudouridine synthase, RsuA/RluA IPR000748 Pseudouridine synthase, RsuA/RluB/E/F IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site IPR002942 RNA-binding S4 domain IPR036986 RNA-binding S4 domain superfamily IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant IPR023555 Thiol-disulphide oxidoreductase ResA IPR036249 Thioredoxin-like superfamily IPR017937 Thioredoxin, conserved site IPR013766 Thioredoxin domain IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant IPR023555 Thiol-disulphide oxidoreductase ResA IPR036249 Thioredoxin-like superfamily IPR017937 Thioredoxin, conserved site IPR013766 Thioredoxin domain IPR016180 Ribosomal protein L10e/L16 IPR036920 Ribosomal protein L10e/L16 superfamily IPR000114 Ribosomal protein L16 IPR020798 Ribosomal protein L16, conserved site IPR007816 ResB-like domain IPR002541 Cytochrome c assembly protein IPR017562 Cytochrome c-type biogenesis protein CcsA IPR011006 CheY-like superfamily IPR001867 OmpR/PhoB-type DNA-binding domain IPR001789 Signal transduction response regulator, receiver domain IPR039420 Transcriptional regulatory protein WalR-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR003660 HAMP domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR041328 ResE, histidine kinase sensor domain IPR000014 PAS domain IPR035965 PAS domain superfamily IPR013767 PAS fold IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR003660 HAMP domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR041328 ResE, histidine kinase sensor domain IPR000014 PAS domain IPR035965 PAS domain superfamily IPR013767 PAS fold IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR003660 HAMP domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR041328 ResE, histidine kinase sensor domain IPR000014 PAS domain IPR035965 PAS domain superfamily IPR013767 PAS fold IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR002491 ABC transporter periplasmic binding domain IPR037294 ABC transporter, BtuC-like IPR000522 ABC transporter, permease protein, BtuC-like IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR001854 Ribosomal protein L29/L35 IPR036049 Ribosomal protein L29/L35 superfamily IPR018254 Ribosomal protein L29, conserved site IPR004485 Cobalamin biosynthesis CobD/CbiB IPR004839 Aminotransferase, class I/classII IPR005860 L-threonine-O-3-phosphate decarboxylase IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR029062 Class I glutamine amidotransferase-like IPR017929 CobB/CobQ glutamine amidotransferase IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 IPR004459 Cobyric acid synthase CobQ IPR011698 CobB/CobQ-like glutamine amidotransferase IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003805 Adenosylcobinamide-GDP ribazoletransferase IPR016030 Cobalamin adenosyltransferase-like IPR036451 Cobalamin adenosyltransferase-like superfamily IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type IPR007391 Vancomycin resistance VanW IPR012340 Nucleic acid-binding, OB-fold IPR019984 30S ribosomal protein S17 IPR000266 Ribosomal protein S17/S11 IPR019979 Ribosomal protein S17, conserved site IPR008844 Spore germination GerAC IPR038501 Spore germination GerAC superfamily IPR011055 Duplicated hybrid motif IPR016047 Peptidase M23 IPR002912 ACT domain IPR029009 Allosteric substrate binding domain superfamily IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain IPR036291 NAD(P)-binding domain superfamily IPR006236 D-3-phosphoglycerate dehydrogenase IPR034274 ENP1, carboxypeptidase domain IPR018392 LysM domain IPR036779 LysM domain superfamily IPR000834 Peptidase M14, carboxypeptidase A IPR008162 Inorganic pyrophosphatase IPR036649 Inorganic pyrophosphatase superfamily IPR001080 3Fe-4S ferredoxin IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPR029491 Helicase Helix-turn-helix domain IPR008308 Uncharacterised conserved protein UCP021350 IPR036388 Winged helix-like DNA-binding domain superfamily IPR011545 DEAD/DEAH box helicase domain IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site IPR004589 DNA helicase, ATP-dependent, RecQ type IPR014001 Helicase superfamily 1/2, ATP-binding domain IPR001650 Helicase, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR036853 Ribosomal protein L14 superfamily IPR000218 Ribosomal protein L14P IPR005745 Ribosomal protein L14P, bacterial-type IPR019972 Ribosomal protein L14P, conserved site IPR003675 CAAX prenyl protease 2 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like IPR013024 Gamma-glutamyl cyclotransferase-like IPR036568 Gamma-glutamyl cyclotransferase-like superfamily IPR017439 Amidohydrolase IPR036264 Bacterial exopeptidase dimerisation domain IPR002933 Peptidase M20 IPR011650 Peptidase M20, dimerisation domain IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR039425 RNA polymerase sigma-70 like IPR014284 RNA polymerase sigma-70 like domain IPR014296 RNA polymerase sigma-M, bacillaceae IPR000838 RNA polymerase sigma factor 70, ECF, conserved site IPR007627 RNA polymerase sigma-70 region 2 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 IPR013325 RNA polymerase sigma factor, region 2 IPR013324 RNA polymerase sigma factor, region 3/4-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR005824 KOW IPR041988 Ribosomal Protein L26/L24, KOW domain IPR014722 Ribosomal protein L2, domain 2 IPR003256 Ribosomal protein L24 IPR005825 Ribosomal protein L24/L26, conserved site IPR008991 Translation protein SH3-like domain superfamily IPR004843 Calcineurin-like phosphoesterase domain, ApaH type IPR029052 Metallo-dependent phosphatase-like IPR038471 MecA, C-terminal domain superfamily IPR008681 Negative regulator of genetic competence, MecA IPR011761 ATP-grasp fold IPR013815 ATP-grasp fold, subdomain 1 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site IPR005905 D-alanine--D-alanine ligase IPR011095 D-alanine--D-alanine ligase, C-terminal IPR011127 D-alanine--D-alanine ligase, N-terminal domain IPR016185 Pre-ATP-grasp domain superfamily IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase IPR033524 Leu/Phe/Val dehydrogenases active site IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain IPR014362 Glutamate dehydrogenase IPR036291 NAD(P)-binding domain superfamily IPR033922 NAD(P) binding domain of glutamate dehydrogenase IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase IPR033524 Leu/Phe/Val dehydrogenases active site IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain IPR014362 Glutamate dehydrogenase IPR036291 NAD(P)-binding domain superfamily IPR033922 NAD(P) binding domain of glutamate dehydrogenase IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA IPR036188 FAD/NAD(P)-binding domain superfamily IPR004550 L-asparaginase, type II IPR036152 Asparaginase/glutaminase-like superfamily IPR006034 Asparaginase/glutaminase-like IPR020827 Asparaginase/glutaminase, active site 1 IPR027475 Asparaginase/glutaminase, active site 2 IPR040919 Asparaginase/glutaminase, C-terminal IPR027473 L-asparaginase, C-terminal IPR027474 L-asparaginase, N-terminal IPR037152 L-asparaginase, N-terminal domain superfamily IPR023596 Peptidase PrsW, archaeal/bacterial IPR026898 Intramembrane metalloprotease PrsW IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR002132 Ribosomal protein L5 IPR020930 Ribosomal protein L5, bacterial-type IPR031309 Ribosomal protein L5, C-terminal IPR020929 Ribosomal protein L5, conserved site IPR022803 Ribosomal protein L5 domain superfamily IPR031310 Ribosomal protein L5, N-terminal IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR029041 FAD-linked oxidoreductase-like IPR003726 Homocysteine-binding domain IPR036589 Homocysteine-binding domain superfamily IPR003171 Methylenetetrahydrofolate reductase IPR003759 Cobalamin (vitamin B12)-binding module, cap domain IPR006158 Cobalamin (vitamin B12)-binding domain IPR036724 Cobalamin-binding domain superfamily IPR011005 Dihydropteroate synthase-like IPR003726 Homocysteine-binding domain IPR036589 Homocysteine-binding domain superfamily IPR033706 Methionine synthase, B12-binding domain IPR011822 Cobalamin-dependent methionine synthase IPR036594 Methionine synthase domain IPR000489 Pterin-binding domain IPR004223 Vitamin B12-dependent methionine synthase, activation domain IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily IPR011105 Cell wall hydrolase, SleB IPR002477 Peptidoglycan binding-like IPR036365 PGBD-like superfamily IPR036366 PGBD superfamily IPR042047 Cell wall hydrolase SleB, domain 1 IPR014224 Spore cortex-lytic enzyme SleB IPR014239 Spore germination YpeB IPR003136 Cytidylate kinase IPR011994 Cytidylate kinase domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase IPR002123 Phospholipid/glycerol acyltransferase IPR012340 Nucleic acid-binding, OB-fold IPR022967 RNA-binding domain, S1 IPR003029 S1 domain IPR001209 Ribosomal protein S14 IPR018271 Ribosomal protein S14, conserved site IPR023053 Ribosomal protein S14, type Z IPR031166 EngA-type guanine nucleotide-binding (G) domain IPR016484 GTP-binding protein EngA IPR006073 GTP binding domain IPR032859 GTPase Der, C-terminal KH-domain-like IPR015946 K homology domain-like, alpha/beta IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005225 Small GTP-binding protein domain IPR003811 Glycerol-3-phosphate acyltransferase, PlsY IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPR013328 6-phosphogluconate dehydrogenase, domain 2 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal IPR036291 NAD(P)-binding domain superfamily IPR002686 Transposase IS200-like IPR036515 Transposase IS200-like superfamily IPR002686 Transposase IS200-like IPR036515 Transposase IS200-like superfamily IPR002686 Transposase IS200-like IPR036515 Transposase IS200-like superfamily IPR002686 Transposase IS200-like IPR036515 Transposase IS200-like superfamily IPR002686 Transposase IS200-like IPR036515 Transposase IS200-like superfamily IPR002686 Transposase IS200-like IPR036515 Transposase IS200-like superfamily IPR002686 Transposase IS200-like IPR036515 Transposase IS200-like superfamily IPR002686 Transposase IS200-like IPR036515 Transposase IS200-like superfamily IPR020076 Protein of unknown function DUF2768 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR014201 Sporulation stage IV, protein A IPR001474 GTP cyclohydrolase I IPR018234 GTP cyclohydrolase I, conserved site IPR020602 GTP cyclohydrolase I domain IPR000824 Transcription attenuation protein MtrB IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily IPR023558 Tryptophan RNA-binding attenuator protein domain IPR000630 Ribosomal protein S8 IPR035987 Ribosomal protein S8 superfamily IPR009920 Heptaprenyl diphosphate synthase subunit 1 IPR014122 Demethylmenaquinone methyltransferase IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR004033 UbiE/COQ5 methyltransferase IPR023576 UbiE/COQ5 methyltransferase, conserved site IPR006370 4-hydroxybenzoate polyprenyltransferase-like IPR039653 Prenyltransferase IPR000537 UbiA prenyltransferase family IPR030470 UbiA prenyltransferase conserved site IPR036551 Flavin prenyltransferase-like IPR003382 Flavoprotein IPR004507 Flavin prenyltransferase UbiX-like IPR003773 Menaquinone biosynthesis enzyme IPR030868 Chorismate dehydratase IPR014119 Heptaprenyl diphosphate synthase component II IPR008949 Isoprenoid synthase domain superfamily IPR000092 Polyprenyl synthetase IPR033749 Polyprenyl synthetase, conserved site IPR034907 Nucleoside diphosphate kinase-like domain IPR036850 Nucleoside diphosphate kinase-like domain superfamily IPR001564 Nucleoside diphosphate kinase IPR023005 Nucleoside diphosphate kinase, active site IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal IPR000780 MCP methyltransferase, CheR-type IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR000453 Chorismate synthase IPR035904 Chorismate synthase AroC superfamily IPR020541 Chorismate synthase, conserved site IPR016037 3-dehydroquinate synthase AroB IPR030963 3-dehydroquinate synthase family IPR030960 3-dehydroquinate synthase domain IPR000702 Ribosomal protein L6 IPR020040 Ribosomal protein L6, alpha-beta domain IPR036789 Ribosomal protein L6, alpha-beta domain superfamily IPR019906 Ribosomal protein L6, bacterial-type IPR002358 Ribosomal protein L6, conserved site IPR008243 Chorismate mutase, AroH class IPR035959 RutC-like superfamily IPR005801 ADC synthase IPR019999 Anthranilate synthase component I-like IPR006805 Anthranilate synthase component I, N-terminal IPR005256 Anthranilate synthase component I, PabB-like IPR015890 Chorismate-utilising enzyme, C-terminal IPR005940 Anthranilate phosphoribosyl transferase IPR000312 Glycosyl transferase, family 3 IPR017459 Glycosyl transferase family 3, N-terminal domain IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily IPR013785 Aldolase-type TIM barrel IPR013798 Indole-3-glycerol phosphate synthase IPR001468 Indole-3-glycerol phosphate synthase, conserved site IPR011060 Ribulose-phosphate binding barrel IPR013785 Aldolase-type TIM barrel IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) IPR011060 Ribulose-phosphate binding barrel IPR001926 Pyridoxal-phosphate dependent enzyme IPR006653 Tryptophan synthase, beta chain, conserved site IPR006654 Tryptophan synthase, beta chain IPR023026 Tryptophan synthase beta chain/beta chain-like IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IPR013785 Aldolase-type TIM barrel IPR011060 Ribulose-phosphate binding barrel IPR018204 Tryptophan synthase, alpha chain, active site IPR002028 Tryptophan synthase, alpha chain IPR004839 Aminotransferase, class I/classII IPR005861 Histidinol-phosphate aminotransferase family IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPR002912 ACT domain IPR036291 NAD(P)-binding domain superfamily IPR003099 Prephenate dehydrogenase IPR001986 Enolpyruvate transferase domain IPR036968 Enolpyruvate transferase domain superfamily IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta IPR005484 Ribosomal protein L18 IPR004389 Ribosomal protein L18, bacterial-type IPR006680 Amidohydrolase-related IPR011778 Hydantoinase/dihydropyrimidinase IPR011059 Metal-dependent hydrolase, composite domain superfamily IPR032466 Metal-dependent hydrolase IPR013026 Tetratricopeptide repeat-containing domain IPR011990 Tetratricopeptide-like helical domain superfamily IPR019734 Tetratricopeptide repeat IPR014957 IDEAL domain IPR011188 Uncharacterised protein family UPF0302 IPR014963 Uncharacterised domain UPF0302, N-terminal IPR038091 UPF0302, N-terminal domain superfamily IPR027393 Virus scaffolding protein, C-terminal IPR019615 Protein of unknown function DUF2487 IPR017941 Rieske [2Fe-2S] iron-sulphur domain IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily IPR014349 Rieske iron-sulphur protein IPR006311 Twin-arginine translocation pathway, signal sequence IPR005797 Cytochrome b/b6, N-terminal IPR027387 Cytochrome b/b6-like domain superfamily IPR016174 Di-haem cytochrome, transmembrane IPR005798 Cytochrome b/b6, C-terminal IPR036150 Cytochrome b/b6, C-terminal domain superfamily IPR009056 Cytochrome c-like domain IPR036909 Cytochrome c-like domain superfamily IPR027387 Cytochrome b/b6-like domain superfamily IPR012049 Menaquinone:cytochrome c reductase, cytochrome b/c subunit IPR009845 Protein of unknown function DUF1405 IPR000851 Ribosomal protein S5 IPR005712 Ribosomal protein S5, bacterial-type IPR005324 Ribosomal protein S5, C-terminal IPR020568 Ribosomal protein S5 domain 2-type fold IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPR013810 Ribosomal protein S5, N-terminal IPR018192 Ribosomal protein S5, N-terminal, conserved site IPR019264 Domain of unknown function DUF2179 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal IPR003740 Uncharacterised membrane protein YitT IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core IPR022663 Dihydrodipicolinate reductase, C-terminal IPR000846 Dihydrodipicolinate reductase, N-terminal IPR022664 Dihydrodipicolinate reductase, conserved site IPR023940 Dihydrodipicolinate reductase IPR036291 NAD(P)-binding domain superfamily IPR004363 Methylglyoxal synthase IPR018148 Methylglyoxal synthase, active site IPR011607 Methylglyoxal synthase-like domain IPR036914 Methylglyoxal synthase-like domain superfamily IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related IPR024078 Putative deacetylase LmbE-like domain superfamily IPR001296 Glycosyl transferase, family 1 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA IPR032810 CCA-adding enzyme, C-terminal IPR002646 Poly A polymerase, head domain IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain IPR030855 Bifunctional ligase/repressor BirA IPR004408 Biotin--acetyl-CoA-carboxylase ligase IPR004409 Biotin operon repressor, helix-turn-helix domain IPR003142 Biotin protein ligase, C-terminal IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain IPR013196 Helix-turn-helix, type 11 IPR008988 Transcriptional repressor, C-terminal IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR003700 Ketopantoate hydroxymethyltransferase IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IPR040442 Pyruvate kinase-like domain superfamily IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily IPR005996 Ribosomal protein L30, bacterial-type IPR018038 Ribosomal protein L30, conserved site IPR016082 Ribosomal protein L30, ferredoxin-like fold domain IPR004821 Cytidyltransferase-like domain IPR003721 Pantoate-beta-alanine ligase IPR042176 Pantoate-beta-alanine ligase, C-terminal domain IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR009010 Aspartate decarboxylase-like domain superfamily IPR003190 Aspartate decarboxylase IPR006555 ATP-dependent helicase, C-terminal IPR006310 3'-5' exonuclease DinG IPR006054 DNA polymerase III epsilon subunit, exonuclease domain IPR013520 Exonuclease, RNase T/DNA polymerase III IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type IPR006935 Helicase/UvrB, N-terminal IPR014001 Helicase superfamily 1/2, ATP-binding domain IPR001650 Helicase, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR012337 Ribonuclease H-like superfamily IPR036397 Ribonuclease H superfamily IPR006555 ATP-dependent helicase, C-terminal IPR006310 3'-5' exonuclease DinG IPR006054 DNA polymerase III epsilon subunit, exonuclease domain IPR013520 Exonuclease, RNase T/DNA polymerase III IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type IPR006935 Helicase/UvrB, N-terminal IPR014001 Helicase superfamily 1/2, ATP-binding domain IPR001650 Helicase, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR012337 Ribonuclease H-like superfamily IPR036397 Ribonuclease H superfamily IPR006680 Amidohydrolase-related IPR023512 Deaminase MtaD/DadD IPR011059 Metal-dependent hydrolase, composite domain superfamily IPR032466 Metal-dependent hydrolase IPR012190 Uncharacterised conserved protein UCP036698, YpmA IPR004839 Aminotransferase, class I/classII IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) IPR006195 Aminoacyl-tRNA synthetase, class II IPR004522 Asparagine-tRNA ligase IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb IPR012340 Nucleic acid-binding, OB-fold IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type IPR034829 DnaD-like domain superfamily IPR006343 DnaD domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR036227 Ribosomal L18e/L15P superfamily IPR030878 Ribosomal protein L15 IPR005749 Ribosomal protein L15, bacterial-type IPR001196 Ribosomal protein L15, conserved site IPR021131 Ribosomal protein L18e/L15P IPR011257 DNA glycosylase IPR004036 Endonuclease III-like, conserved site-2 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif IPR004035 Endonuclease III, iron-sulphur binding site IPR003265 HhH-GPD domain IPR000445 Helix-hairpin-helix motif IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal IPR005759 Endonuclease III IPR022812 Dynamin superfamily IPR027094 Mitofusin family IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR012338 Beta-lactamase/transpeptidase-like IPR003961 Fibronectin type III IPR036116 Fibronectin type III superfamily IPR001264 Glycosyl transferase, family 51 IPR013783 Immunoglobulin-like fold IPR023346 Lysozyme-like domain superfamily IPR036950 Penicillin binding protein transglycosylase domain IPR001460 Penicillin-binding protein, transpeptidase IPR004612 Holliday junction resolvase RecU IPR011335 Restriction endonuclease type II-like IPR011856 tRNA endonuclease-like domain superfamily IPR019658 Protein of unknown function DUF2515 IPR019658 Protein of unknown function DUF2515 IPR023522 Chromosome-anchoring protein RacA IPR009061 Putative DNA-binding domain superfamily IPR000551 MerR-type HTH domain IPR026593 Protein translocase subunit SecY IPR002208 SecY/SEC61-alpha family IPR030659 SecY conserved site IPR023201 SecY domain superfamily IPR001763 Rhodanese-like domain IPR036873 Rhodanese-like domain superfamily IPR005115 Uncharacterised domain UPF0126 IPR011820 L-threonine dehydratase biosynthetic IlvA IPR001926 Pyridoxal-phosphate dependent enzyme IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site IPR001721 Threonine dehydratase, ACT-like domain IPR038110 Threonine dehydratase, ACT-like domain superfamily IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IPR024181 Chemotaxis response regulator CheV IPR036061 CheW-like domain superfamily IPR002545 CheW-like domain IPR011006 CheY-like superfamily IPR001789 Signal transduction response regulator, receiver domain IPR024181 Chemotaxis response regulator CheV IPR036061 CheW-like domain superfamily IPR002545 CheW-like domain IPR011006 CheY-like superfamily IPR001789 Signal transduction response regulator, receiver domain IPR001279 Metallo-beta-lactamase IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPR013471 Ribonuclease Z/BN IPR036249 Thioredoxin-like superfamily IPR009474 Putative bacilliredoxin, YphP/YqiW family IPR006259 Adenylate kinase subfamily IPR000850 Adenylate kinase/UMP-CMP kinase IPR033690 Adenylate kinase, conserved site IPR007862 Adenylate kinase, active site lid domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR011989 Armadillo-like helical IPR016024 Armadillo-type fold IPR014824 Scaffold protein Nfu/NifU, N-terminal IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily IPR004155 PBS lyase HEAT-like repeat IPR025989 Virulence factor domain IPR005182 Domain of unknown function DUF304 IPR005182 Domain of unknown function DUF304 IPR014529 Uncharacterised conserved protein UCP026631 IPR001279 Metallo-beta-lactamase IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPR036005 Creatinase/aminopeptidase-like IPR000994 Peptidase M24 IPR001714 Peptidase M24, methionine aminopeptidase IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 IPR013785 Aldolase-type TIM barrel IPR017932 Glutamine amidotransferase type 2 domain IPR002489 Glutamate synthase, alpha subunit, C-terminal IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily IPR006982 Glutamate synthase, central-N IPR002932 Glutamate synthase domain IPR029055 Nucleophile aminohydrolases, N-terminal IPR028261 Dihydroprymidine dehydrogenase domain II IPR036188 FAD/NAD(P)-binding domain superfamily IPR023753 FAD/NAD(P)-binding domain IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 IPR009051 Alpha-helical ferredoxin IPR025616 YpjP-like protein IPR041522 CdaR, GGDEF-like domain IPR025736 PucR C-terminal helix-turn-helix domain IPR042070 PucR C-terminal helix-turn-helix domain superfamily IPR012914 Purine catabolism PurC-like domain IPR041522 CdaR, GGDEF-like domain IPR025736 PucR C-terminal helix-turn-helix domain IPR042070 PucR C-terminal helix-turn-helix domain superfamily IPR012914 Purine catabolism PurC-like domain IPR041522 CdaR, GGDEF-like domain IPR025736 PucR C-terminal helix-turn-helix domain IPR042070 PucR C-terminal helix-turn-helix domain superfamily IPR012914 Purine catabolism PurC-like domain IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme IPR006237 L-methionine gamma-lyase IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme IPR006237 L-methionine gamma-lyase IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR016161 Aldehyde/histidinol dehydrogenase IPR016163 Aldehyde dehydrogenase, C-terminal IPR029510 Aldehyde dehydrogenase, glutamic acid active site IPR016162 Aldehyde dehydrogenase, N-terminal IPR015590 Aldehyde dehydrogenase domain IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal IPR036005 Creatinase/aminopeptidase-like IPR000587 Creatinase, N-terminal IPR014335 Ectoine utilization protein EutD IPR000994 Peptidase M24 IPR000620 EamA domain IPR013785 Aldolase-type TIM barrel IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA IPR002220 DapA-like IPR020625 Schiff base-forming aldolase, active site IPR020624 Schiff base-forming aldolase, conserved site IPR018540 Aspartyl-phosphate phosphatase Spo0E-like IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily IPR000150 Cof family IPR036412 HAD-like superfamily IPR006379 HAD-superfamily hydrolase, subfamily IIB IPR023214 HAD superfamily IPR000150 Cof family IPR036412 HAD-like superfamily IPR006379 HAD-superfamily hydrolase, subfamily IIB IPR023214 HAD superfamily IPR012340 Nucleic acid-binding, OB-fold IPR006196 RNA-binding domain, S1, IF1 type IPR022967 RNA-binding domain, S1 IPR004368 Translation initiation factor IF-1 IPR013785 Aldolase-type TIM barrel IPR010722 Biotin and thiamin synthesis-associated domain IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB IPR024177 Biotin synthase IPR006638 Elp3/MiaB/NifB IPR007197 Radical SAM IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT IPR011540 AbgT, Proteobacteria IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT IPR011540 AbgT, Proteobacteria IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR001128 Cytochrome P450 IPR002401 Cytochrome P450, E-class, group I IPR036396 Cytochrome P450 superfamily IPR000473 Ribosomal protein L36 IPR035977 Ribosomal protein L36 superfamily IPR011780 D-serine ammonia-lyase IPR001926 Pyridoxal-phosphate dependent enzyme IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPR013328 6-phosphogluconate dehydrogenase, domain 2 IPR003710 Ketopantoate reductase ApbA/PanE IPR013752 Ketopantoate reductase, C-terminal domain IPR013332 Ketopantoate reductase, N-terminal domain IPR036291 NAD(P)-binding domain superfamily IPR018973 DEAD/DEAH-box helicase, putative IPR011545 DEAD/DEAH box helicase domain IPR014001 Helicase superfamily 1/2, ATP-binding domain IPR001650 Helicase, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR012337 Ribonuclease H-like superfamily IPR011990 Tetratricopeptide-like helical domain superfamily IPR038720 YprB, ribonuclease H-like domain IPR027437 30s ribosomal protein S13, C-terminal IPR001892 Ribosomal protein S13 IPR010979 Ribosomal protein S13-like, H2TH IPR019980 Ribosomal protein S13, bacterial-type IPR018269 Ribosomal protein S13, conserved site IPR010697 YspA SLOG family IPR011229 Cell cycle protein GpsB IPR019933 DivIVA domain IPR007793 DivIVA family IPR012337 Ribonuclease H-like superfamily IPR002156 Ribonuclease H domain IPR036397 Ribonuclease H superfamily IPR002052 DNA methylase, N-6 adenine-specific, conserved site IPR000241 Putative RNA methylase domain IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR004114 THUMP domain IPR001463 Sodium:alanine symporter IPR001463 Sodium:alanine symporter IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal IPR005218 Diacylglycerol/lipid kinase IPR001206 Diacylglycerol kinase, catalytic domain IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily IPR030395 Glycerophosphodiester phosphodiesterase domain IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily IPR001971 Ribosomal protein S11 IPR019981 Ribosomal protein S11, bacterial-type IPR018102 Ribosomal S11, conserved site IPR036967 Ribosomal protein S11 superfamily IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IPR022858 Metallothiol transferase FosB IPR037523 Vicinal oxygen chelate (VOC) domain IPR025012 Domain of unknown function DUF3898 IPR025006 Protein of unknown function DUF3900 IPR008231 Probable chaperone CsaA IPR012340 Nucleic acid-binding, OB-fold IPR002547 tRNA-binding domain IPR013096 Cupin 2, conserved barrel IPR009057 Homeobox-like domain superfamily IPR018060 DNA binding HTH domain, AraC-type IPR018062 HTH domain AraC-type, conserved site IPR014710 RmlC-like jelly roll fold IPR011051 RmlC-like cupin domain superfamily IPR005119 LysR, substrate-binding IPR000847 Transcription regulator HTH, LysR IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR011262 DNA-directed RNA polymerase, insert domain IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type IPR011773 DNA-directed RNA polymerase, alpha subunit IPR036603 RNA polymerase, RBP11-like subunit IPR011260 RNA polymerase, alpha subunit, C-terminal IPR036643 DNA-directed RNA polymerase, insert domain superfamily IPR001233 tRNA-splicing ligase, RtcB IPR036025 tRNA-splicing ligase RtcB-like superfamily IPR006555 ATP-dependent helicase, C-terminal IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR025299 CstA, C-terminal domain IPR003706 CstA, N-terminal domain IPR025723 Anion-transporting ATPase-like domain IPR016300 Arsenical pump ATPase, ArsA/GET3 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR030678 Peptide/nickel binding protein, MppA-type IPR039424 Solute-binding protein family 5 IPR000914 Solute-binding protein family 5 domain IPR030678 Peptide/nickel binding protein, MppA-type IPR039424 Solute-binding protein family 5 IPR000914 Solute-binding protein family 5 domain IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000456 Ribosomal protein L17 IPR036373 Ribosomal protein L17 superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR014157 Nickel ABC transporter, permease subunit NikC IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR028082 Periplasmic binding protein-like I IPR003760 ABC transporter substrate-binding protein PnrA-like IPR028082 Periplasmic binding protein-like I IPR003760 ABC transporter substrate-binding protein PnrA-like IPR003660 HAMP domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR000014 PAS domain IPR000700 PAS-associated, C-terminal IPR035965 PAS domain superfamily IPR013767 PAS fold IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR003660 HAMP domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR000014 PAS domain IPR000700 PAS-associated, C-terminal IPR035965 PAS domain superfamily IPR013767 PAS fold IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR003660 HAMP domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR000014 PAS domain IPR000700 PAS-associated, C-terminal IPR035965 PAS domain superfamily IPR013767 PAS fold IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR014044 CAP domain IPR014258 CAP domain, YkwD-like IPR035940 CAP superfamily IPR014044 CAP domain IPR014258 CAP domain, YkwD-like IPR035940 CAP superfamily IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR010233 Ubiquinone biosynthesis O-methyltransferase IPR013137 Zinc finger, TFIIB-type IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR015856 ABC transporter, CbiO/EcfA subunit IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily IPR003709 Peptidase M15B IPR003607 HD/PDEase domain IPR006674 HD domain IPR003833 Carboxyltransferase domain, subdomain C and D IPR029000 Cyclophilin-like domain superfamily IPR010016 KipI family IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR015856 ABC transporter, CbiO/EcfA subunit IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003778 Carboxyltransferase domain, subdomain A and B IPR029000 Cyclophilin-like domain superfamily IPR029016 GAF-like domain superfamily IPR014757 Transcription regulator IclR, C-terminal IPR005471 Transcription regulator IclR, N-terminal IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR001046 NRAMP family IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel IPR005501 LamB/YcsF/PxpA-like IPR001017 Dehydrogenase, E1 component IPR029061 Thiamin diphosphate-binding fold IPR001017 Dehydrogenase, E1 component IPR029061 Thiamin diphosphate-binding fold IPR029061 Thiamin diphosphate-binding fold IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II IPR005475 Transketolase-like, pyrimidine-binding domain IPR033248 Transketolase, C-terminal domain IPR029061 Thiamin diphosphate-binding fold IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II IPR005475 Transketolase-like, pyrimidine-binding domain IPR033248 Transketolase, C-terminal domain IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain IPR000089 Biotin/lipoyl attachment IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IPR036625 E3-binding domain superfamily IPR004167 Peripheral subunit-binding domain IPR011053 Single hybrid motif IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain IPR000089 Biotin/lipoyl attachment IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IPR036625 E3-binding domain superfamily IPR004167 Peripheral subunit-binding domain IPR011053 Single hybrid motif IPR036188 FAD/NAD(P)-binding domain superfamily IPR023753 FAD/NAD(P)-binding domain IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily IPR006258 Dihydrolipoamide dehydrogenase IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site IPR003593 AAA+ ATPase domain IPR003018 GAF domain IPR029016 GAF-like domain superfamily IPR009057 Homeobox-like domain superfamily IPR002197 DNA binding HTH domain, Fis-type IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR002078 RNA polymerase sigma factor 54 interaction domain IPR025944 Sigma-54 interaction domain, conserved site IPR033479 Double Cache domain 1 IPR003660 HAMP domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR029151 Periplasmic sensor-like domain superfamily IPR033479 Double Cache domain 1 IPR003660 HAMP domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR029151 Periplasmic sensor-like domain superfamily IPR003339 ABC/ECF transporter, transmembrane component IPR024919 ECF transporter transmembrane protein EcfT IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR002935 Class I-like SAM-dependent O-methyltransferase IPR013149 Alcohol dehydrogenase, C-terminal IPR013154 Alcohol dehydrogenase, N-terminal IPR027399 Alcohol dehydrogenase GroES-associated IPR002328 Alcohol dehydrogenase, zinc-type, conserved site IPR011032 GroES-like superfamily IPR036291 NAD(P)-binding domain superfamily IPR003804 L-lactate permease IPR003804 L-lactate permease IPR004017 Cysteine-rich domain IPR022822 Lactate utilization protein A IPR004452 4Fe-4S binding protein IPR024569 4Fe-4S binding protein, C-terminal IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily IPR009051 Alpha-helical ferredoxin IPR003741 LUD domain IPR022825 Lactate utilization protein B IPR037171 NagB/RpiA transferase-like IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily IPR003741 LUD domain IPR022823 Lactate utilization protein C IPR037171 NagB/RpiA transferase-like IPR011711 GntR, C-terminal IPR008920 Transcription regulator FadR/GntR, C-terminal IPR000524 Transcription regulator HTH, GntR IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR001279 Metallo-beta-lactamase IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPR020103 Pseudouridine synthase, catalytic domain superfamily IPR001406 Pseudouridine synthase I, TruA IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain IPR020095 Pseudouridine synthase I, TruA, C-terminal IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 IPR000794 Beta-ketoacyl synthase IPR018201 Beta-ketoacyl synthase, active site IPR014031 Beta-ketoacyl synthase, C-terminal IPR014030 Beta-ketoacyl synthase, N-terminal IPR020841 Polyketide synthase, beta-ketoacyl synthase domain IPR016039 Thiolase-like IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 IPR000794 Beta-ketoacyl synthase IPR018201 Beta-ketoacyl synthase, active site IPR014031 Beta-ketoacyl synthase, C-terminal IPR014030 Beta-ketoacyl synthase, N-terminal IPR020841 Polyketide synthase, beta-ketoacyl synthase domain IPR016039 Thiolase-like IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase IPR036291 NAD(P)-binding domain superfamily IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR002347 Short-chain dehydrogenase/reductase SDR IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 IPR016039 Thiolase-like IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain IPR000089 Biotin/lipoyl attachment IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IPR036625 E3-binding domain superfamily IPR004167 Peripheral subunit-binding domain IPR011053 Single hybrid motif IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain IPR000089 Biotin/lipoyl attachment IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IPR036625 E3-binding domain superfamily IPR004167 Peripheral subunit-binding domain IPR011053 Single hybrid motif IPR005822 Ribosomal protein L13 IPR005823 Ribosomal protein L13, bacterial-type IPR023563 Ribosomal protein L13, conserved site IPR036899 Ribosomal protein L13 superfamily IPR002937 Amine oxidase IPR014105 Carotenoid/retinoid oxidoreductase IPR036188 FAD/NAD(P)-binding domain superfamily IPR029045 ClpP/crotonase-like domain superfamily IPR018376 Enoyl-CoA hydratase/isomerase, conserved site IPR001753 Enoyl-CoA hydratase/isomerase IPR014748 Enoyl-CoA hydratase, C-terminal IPR029045 ClpP/crotonase-like domain superfamily IPR018376 Enoyl-CoA hydratase/isomerase, conserved site IPR001753 Enoyl-CoA hydratase/isomerase IPR014748 Enoyl-CoA hydratase, C-terminal IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ IPR029069 HotDog domain superfamily IPR002938 FAD-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily IPR000843 LacI-type HTH domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR028082 Periplasmic binding protein-like I IPR025997 Periplasmic binding protein IPR036878 Glucose permease domain IIB IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site IPR003352 Phosphotransferase system, EIIC IPR013013 Phosphotransferase system, EIIC component, type 1 IPR001996 Phosphotransferase system, IIB component, type 1 IPR010973 Phosphotransferase system, sucrose-specific IIBC component IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component IPR002173 Carbohydrate/puine kinase, PfkB, conserved site IPR011611 Carbohydrate kinase PfkB IPR002139 Ribokinase/fructokinase IPR029056 Ribokinase-like IPR020568 Ribosomal protein S5 domain 2-type fold IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPR000754 Ribosomal protein S9 IPR023035 Ribosomal protein S9, bacterial/plastid IPR020574 Ribosomal protein S9, conserved site IPR013320 Concanavalin A-like lectin/glucanase domain superfamily IPR001362 Glycoside hydrolase, family 32 IPR018053 Glycoside hydrolase, family 32, active site IPR013189 Glycosyl hydrolase family 32, C-terminal IPR013148 Glycosyl hydrolase family 32, N-terminal IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily IPR006232 Sucrose-6-phosphate hydrolase IPR010720 Alpha-L-arabinofuranosidase, C-terminal IPR013780 Glycosyl hydrolase, all-beta IPR017853 Glycoside hydrolase superfamily IPR023003 Glycerol-1-phosphate dehydrogenase, bacteria IPR032837 Glycerol-1-phosphate dehydrogenase IPR006059 Bacterial extracellular solute-binding protein IPR006061 Solute-binding family 1, conserved site IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily IPR006710 Glycoside hydrolase, family 43 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily IPR018313 Solute-binding protein family 3, conserved site IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IPR001303 Class II aldolase/adducin N-terminal IPR036409 Class II aldolase/adducin N-terminal domain superfamily IPR004661 L-ribulose-5-phosphate 4-epimerase IPR000577 Carbohydrate kinase, FGGY IPR018485 Carbohydrate kinase, FGGY, C-terminal IPR018484 Carbohydrate kinase, FGGY, N-terminal IPR005929 Ribulokinase IPR024664 L-arabinose isomerase, C-terminal IPR038583 L-arabinose isomerase, N-terminal domain superfamily IPR004216 L-fucose/L-arabinose isomerase, C-terminal IPR009015 L-fucose isomerase, N-terminal/central domain superfamily IPR003762 L-arabinose isomerase IPR010720 Alpha-L-arabinofuranosidase, C-terminal IPR013780 Glycosyl hydrolase, all-beta IPR017853 Glycoside hydrolase superfamily IPR033532 Arabinose metabolism transcriptional repressor, ligand-binding domain IPR028082 Periplasmic binding protein-like I IPR000524 Transcription regulator HTH, GntR IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR032291 Extracellular endo-alpha-(1->5)-L-arabinanase, C-terminal IPR006710 Glycoside hydrolase, family 43 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily IPR003593 AAA+ ATPase domain IPR029016 GAF-like domain superfamily IPR009057 Homeobox-like domain superfamily IPR002197 DNA binding HTH domain, Fis-type IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR000014 PAS domain IPR035965 PAS domain superfamily IPR002078 RNA polymerase sigma factor 54 interaction domain IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IPR025944 Sigma-54 interaction domain, conserved site IPR003593 AAA+ ATPase domain IPR029016 GAF-like domain superfamily IPR009057 Homeobox-like domain superfamily IPR002197 DNA binding HTH domain, Fis-type IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR000014 PAS domain IPR035965 PAS domain superfamily IPR002078 RNA polymerase sigma factor 54 interaction domain IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IPR025944 Sigma-54 interaction domain, conserved site IPR030191 Cytosine permease IPR001248 Purine-cytosine permease IPR038271 Purine-cytosine permease superfamily IPR007685 RelA/SpoT IPR023772 DNA-binding HTH domain, TetR-type, conserved site IPR009057 Homeobox-like domain superfamily IPR001647 DNA-binding HTH domain, TetR-type IPR003593 AAA+ ATPase domain IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR007344 GrpB/Dephospho-CoA kinase IPR007837 DNA damage-inducible protein DinB IPR034660 DinB/YfiT-like putative metalloenzymes IPR007837 DNA damage-inducible protein DinB IPR034660 DinB/YfiT-like putative metalloenzymes IPR020476 NUDIX hydrolase IPR015797 NUDIX hydrolase-like domain superfamily IPR020084 NUDIX hydrolase, conserved site IPR000086 NUDIX hydrolase domain IPR004484 Cobyrinic acid a,c-diamide synthase CbiA IPR029062 Class I glutamine amidotransferase-like IPR017929 CobB/CobQ glutamine amidotransferase IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain IPR011698 CobB/CobQ-like glutamine amidotransferase IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR032781 ABC-transporter extension domain IPR003439 ABC transporter-like IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR010897 Sporulation stage II, protein P IPR011013 Galactose mutarotase-like domain superfamily IPR000322 Glycoside hydrolase family 31 IPR025887 Glycoside hydrolase family 31, N-terminal domain IPR013780 Glycosyl hydrolase, all-beta IPR017853 Glycoside hydrolase superfamily IPR003313 AraC-type arabinose-binding/dimerisation domain IPR009057 Homeobox-like domain superfamily IPR037923 Transcription regulator HTH-like IPR018060 DNA binding HTH domain, AraC-type IPR018062 HTH domain AraC-type, conserved site IPR026891 Fibronectin type III-like domain IPR002772 Glycoside hydrolase family 3 C-terminal domain IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily IPR001764 Glycoside hydrolase, family 3, N-terminal IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily IPR017853 Glycoside hydrolase superfamily IPR013783 Immunoglobulin-like fold IPR037524 PA14/GLEYA domain IPR011658 PA14 domain IPR011006 CheY-like superfamily IPR007492 LytTR DNA-binding domain IPR001789 Signal transduction response regulator, receiver domain IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel IPR002509 NodB homology domain IPR014330 RNA-binding S4-related,YaaA IPR002942 RNA-binding S4 domain IPR036986 RNA-binding S4 domain superfamily IPR016181 Acyl-CoA N-acyltransferase IPR001360 Glycoside hydrolase family 1 IPR018120 Glycoside hydrolase family 1, active site IPR017736 Glycoside hydrolase, family 1, beta-glucosidase IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site IPR017853 Glycoside hydrolase superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000843 LacI-type HTH domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR028082 Periplasmic binding protein-like I IPR023588 Transcription regulator HTH, PurR IPR000209 Peptidase S8/S53 domain IPR036852 Peptidase S8/S53 domain superfamily IPR023827 Peptidase S8, subtilisin, Asp-active site IPR022398 Peptidase S8, subtilisin, His-active site IPR023828 Peptidase S8, subtilisin, Ser-active site IPR015500 Peptidase S8, subtilisin-related IPR004779 Carboxylate/Amino Acid/Amine Transporter IPR000620 EamA domain IPR025110 AMP-binding enzyme, C-terminal domain IPR020845 AMP-binding, conserved site IPR000873 AMP-dependent synthetase/ligase IPR042099 AMP-dependent synthetase-like superfamily IPR037509 Phosphomethylpyrimidine synthase IPR025747 ThiC-associated domain IPR038521 ThiC/Bza superfamily IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B IPR004995 Bacillus/Clostridium Ger spore germination protein IPR008844 Spore germination GerAC IPR038501 Spore germination GerAC superfamily IPR004761 Spore germination GerAB IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily IPR029041 FAD-linked oxidoreductase-like IPR008219 Proline dehydrogenase, bacteria and archaea IPR002872 Proline dehydrogenase domain IPR015659 Proline oxidase family IPR004839 Aminotransferase, class I/classII IPR015424 Pyridoxal phosphate-dependent transferase IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR000524 Transcription regulator HTH, GntR IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR003752 Disulphide bond formation protein DsbB/BdbC IPR012187 Disulphide bond formation protein BdbC IPR023380 DsbB-like superfamily IPR011006 CheY-like superfamily IPR001867 OmpR/PhoB-type DNA-binding domain IPR001789 Signal transduction response regulator, receiver domain IPR039420 Transcriptional regulatory protein WalR-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR000644 CBS domain IPR006668 Magnesium transporter, MgtE intracellular domain IPR038076 MgtE, N-terminal domain superfamily IPR038048 Magnesium transporter MgtE, transmembrane domain IPR006669 Magnesium transporter MgtE IPR006667 SLC41 divalent cation transporters, integral membrane domain IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily IPR000644 CBS domain IPR006668 Magnesium transporter, MgtE intracellular domain IPR038076 MgtE, N-terminal domain superfamily IPR038048 Magnesium transporter MgtE, transmembrane domain IPR006669 Magnesium transporter MgtE IPR006667 SLC41 divalent cation transporters, integral membrane domain IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily IPR000644 CBS domain IPR006668 Magnesium transporter, MgtE intracellular domain IPR038076 MgtE, N-terminal domain superfamily IPR038048 Magnesium transporter MgtE, transmembrane domain IPR006669 Magnesium transporter MgtE IPR006667 SLC41 divalent cation transporters, integral membrane domain IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily IPR003719 Phenazine biosynthesis PhzF protein IPR013149 Alcohol dehydrogenase, C-terminal IPR013154 Alcohol dehydrogenase, N-terminal IPR002328 Alcohol dehydrogenase, zinc-type, conserved site IPR011032 GroES-like superfamily IPR036291 NAD(P)-binding domain superfamily IPR020843 Polyketide synthase, enoylreductase domain IPR013149 Alcohol dehydrogenase, C-terminal IPR013154 Alcohol dehydrogenase, N-terminal IPR002328 Alcohol dehydrogenase, zinc-type, conserved site IPR011032 GroES-like superfamily IPR036291 NAD(P)-binding domain superfamily IPR020843 Polyketide synthase, enoylreductase domain IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal IPR005218 Diacylglycerol/lipid kinase IPR001206 Diacylglycerol kinase, catalytic domain IPR022433 Lipid kinase YegS IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily IPR006009 N-acetylglucosaminyltransferase, MurG IPR007235 Glycosyl transferase, family 28, C-terminal IPR004276 Glycosyltransferase family 28, N-terminal domain IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003313 AraC-type arabinose-binding/dimerisation domain IPR009057 Homeobox-like domain superfamily IPR037923 Transcription regulator HTH-like IPR018060 DNA binding HTH domain, AraC-type IPR018062 HTH domain AraC-type, conserved site IPR014710 RmlC-like jelly roll fold IPR020449 Transcription regulator HTH, AraC- type IPR023609 Transcription regulator HTH, RhaS IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR023495 Sugar efflux transporter, putative IPR003680 Flavodoxin-like fold IPR029039 Flavoprotein-like superfamily IPR023048 NADH-azoreductase, FMN-dependent IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR003777 XdhC- CoxI IPR027051 XdhC Rossmann domain IPR003777 XdhC- CoxI IPR027051 XdhC Rossmann domain IPR025918 YIEGIA protein IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily IPR009057 Homeobox-like domain superfamily IPR000281 Helix-turn-helix protein RpiR IPR035472 RpiR-like, SIS domain IPR001347 Sugar isomerase (SIS) IPR036388 Winged helix-like DNA-binding domain superfamily IPR002888 [2Fe-2S]-binding IPR036884 [2Fe-2S]-binding domain superfamily IPR036010 2Fe-2S ferredoxin-like superfamily IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site IPR017606 4-hydroxybenzoyl-CoA reductase, gamma subunit IPR012675 Beta-grasp domain superfamily IPR018028 Catalase, mono-functional, haem-containing IPR024708 Catalase active site IPR024712 Catalase, mono-functional, haem-containing, clade 2 IPR011614 Catalase core domain IPR037060 Catalase core domain superfamily IPR002226 Catalase haem-binding site IPR010582 Catalase immune-responsive domain IPR041399 Large catalase, C-terminal domain IPR020835 Catalase superfamily IPR029062 Class I glutamine amidotransferase-like IPR015111 Hut operon regulatory protein HutP IPR023552 Hut operon regulatory protein HutP, bacillales IPR036482 Hut operon regulatory protein HutP superfamily IPR001106 Aromatic amino acid lyase IPR024083 Fumarase/histidase, N-terminal IPR005921 Histidine ammonia-lyase IPR008948 L-Aspartase-like IPR022313 Phenylalanine/histidine ammonia-lyases, active site IPR023637 Urocanase IPR035401 Urocanase, C-terminal domain IPR038364 Urocanase, central domain superfamily IPR023636 Urocanase conserved site IPR035400 Urocanase, N-terminal domain IPR035085 Urocanase, Rossmann-like domain IPR036190 Urocanase superfamily IPR013108 Amidohydrolase 3 IPR005920 Imidazolonepropionase IPR011059 Metal-dependent hydrolase, composite domain superfamily IPR032466 Metal-dependent hydrolase IPR005923 Formiminoglutamase IPR006035 Ureohydrolase IPR023696 Ureohydrolase domain superfamily IPR020855 Ureohydrolase, manganese-binding site IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal IPR032813 Putative Na+/H+ antiporter, N-terminal IPR040702 Response regulator aspartate phosphatase, N-terminal IPR013026 Tetratricopeptide repeat-containing domain IPR011990 Tetratricopeptide-like helical domain superfamily IPR019734 Tetratricopeptide repeat IPR040702 Response regulator aspartate phosphatase, N-terminal IPR013026 Tetratricopeptide repeat-containing domain IPR011990 Tetratricopeptide-like helical domain superfamily IPR019734 Tetratricopeptide repeat IPR001360 Glycoside hydrolase family 1 IPR018120 Glycoside hydrolase family 1, active site IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site IPR017853 Glycoside hydrolase superfamily IPR004995 Bacillus/Clostridium Ger spore germination protein IPR022694 3-hydroxyacyl-CoA dehydrogenase IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPR013328 6-phosphogluconate dehydrogenase, domain 2 IPR036291 NAD(P)-binding domain superfamily IPR029045 ClpP/crotonase-like domain superfamily IPR018376 Enoyl-CoA hydratase/isomerase, conserved site IPR001753 Enoyl-CoA hydratase/isomerase IPR014748 Enoyl-CoA hydratase, C-terminal IPR029045 ClpP/crotonase-like domain superfamily IPR018376 Enoyl-CoA hydratase/isomerase, conserved site IPR001753 Enoyl-CoA hydratase/isomerase IPR014748 Enoyl-CoA hydratase, C-terminal IPR002155 Thiolase IPR016039 Thiolase-like IPR020615 Thiolase, acyl-enzyme intermediate active site IPR020617 Thiolase, C-terminal IPR020613 Thiolase, conserved site IPR020616 Thiolase, N-terminal IPR019802 Glycoside hydrolase, family 4, conserved site IPR001088 Glycoside hydrolase, family 4 IPR022616 Glycosyl hydrolase, family 4, C-terminal IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal IPR036291 NAD(P)-binding domain superfamily IPR019802 Glycoside hydrolase, family 4, conserved site IPR001088 Glycoside hydrolase, family 4 IPR022616 Glycosyl hydrolase, family 4, C-terminal IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal IPR036291 NAD(P)-binding domain superfamily IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase IPR002938 FAD-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site IPR029069 HotDog domain superfamily IPR011234 Fumarylacetoacetase-like, C-terminal IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily IPR013096 Cupin 2, conserved barrel IPR014710 RmlC-like jelly roll fold IPR011051 RmlC-like cupin domain superfamily IPR013096 Cupin 2, conserved barrel IPR014710 RmlC-like jelly roll fold IPR011051 RmlC-like cupin domain superfamily IPR011234 Fumarylacetoacetase-like, C-terminal IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily IPR013149 Alcohol dehydrogenase, C-terminal IPR013154 Alcohol dehydrogenase, N-terminal IPR002328 Alcohol dehydrogenase, zinc-type, conserved site IPR011032 GroES-like superfamily IPR036291 NAD(P)-binding domain superfamily IPR011006 CheY-like superfamily IPR007492 LytTR DNA-binding domain IPR001789 Signal transduction response regulator, receiver domain IPR026988 YaaC-like protein IPR006680 Amidohydrolase-related IPR023512 Deaminase MtaD/DadD IPR011059 Metal-dependent hydrolase, composite domain superfamily IPR032466 Metal-dependent hydrolase IPR000843 LacI-type HTH domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR028082 Periplasmic binding protein-like I IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein IPR006059 Bacterial extracellular solute-binding protein IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR013739 Beta-galactosidase C-terminal IPR013738 Beta-galactosidase trimerisation IPR029062 Class I glutamine amidotransferase-like IPR003476 Glycoside hydrolase, family 42 IPR013529 Glycoside hydrolase, family 42, N-terminal IPR013780 Glycosyl hydrolase, all-beta IPR017853 Glycoside hydrolase superfamily IPR011683 Glycosyl hydrolase family 53 IPR017853 Glycoside hydrolase superfamily IPR003593 AAA+ ATPase domain IPR032524 ABC transporter Uup, C-terminal IPR032781 ABC-transporter extension domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily IPR003593 AAA+ ATPase domain IPR032524 ABC transporter Uup, C-terminal IPR032781 ABC-transporter extension domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily IPR002155 Thiolase IPR016039 Thiolase-like IPR020615 Thiolase, acyl-enzyme intermediate active site IPR020610 Thiolase, active site IPR020617 Thiolase, C-terminal IPR020613 Thiolase, conserved site IPR020616 Thiolase, N-terminal IPR006043 Xanthine/uracil/vitamin C permease IPR014922 Domain of unknown function DUF1801 IPR025502 TldD IPR002510 Metalloprotease TldD/PmbA IPR035068 Metalloprotease TldD/PmbA, N-terminal IPR036059 Metalloprotease TldD/PmbA superfamily IPR002510 Metalloprotease TldD/PmbA IPR035068 Metalloprotease TldD/PmbA, N-terminal IPR036059 Metalloprotease TldD/PmbA superfamily IPR013149 Alcohol dehydrogenase, C-terminal IPR013154 Alcohol dehydrogenase, N-terminal IPR002328 Alcohol dehydrogenase, zinc-type, conserved site IPR011032 GroES-like superfamily IPR036291 NAD(P)-binding domain superfamily IPR020843 Polyketide synthase, enoylreductase domain IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR013026 Tetratricopeptide repeat-containing domain IPR011990 Tetratricopeptide-like helical domain superfamily IPR019734 Tetratricopeptide repeat IPR029039 Flavoprotein-like superfamily IPR005025 NADPH-dependent FMN reductase-like IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR004033 UbiE/COQ5 methyltransferase IPR023576 UbiE/COQ5 methyltransferase, conserved site IPR012610 Small acid-soluble spore protein, SspH IPR008928 Six-hairpin glycosidase superfamily IPR012341 Six-hairpin glycosidase-like superfamily IPR010905 Glycosyl hydrolase, family 88 IPR011013 Galactose mutarotase-like domain superfamily IPR000322 Glycoside hydrolase family 31 IPR017853 Glycoside hydrolase superfamily IPR032816 SNARE associated Golgi protein IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR015985 Tellurite resistance methyltransferase TehB-like domain IPR004537 Tellurite resistance methyltransferase, TehB IPR007553 Domain of unknown function DUF523 IPR000835 MarR-type HTH domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR000835 MarR-type HTH domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR002429 Cytochrome c oxidase subunit II-like C-terminal IPR008972 Cupredoxin IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain IPR011759 Cytochrome C oxidase subunit II, transmembrane domain IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily IPR006333 Cytochrome o ubiquinol oxidase subunit II IPR006332 Quinol oxidase subunit II IPR023616 Cytochrome c oxidase-like, subunit I domain IPR036927 Cytochrome c oxidase-like, subunit I superfamily IPR000883 Cytochrome c oxidase subunit I IPR023615 Cytochrome c oxidase, subunit I, copper-binding site IPR014233 Quinol oxidase subunit I IPR024791 Cytochrome c oxidase subunit III IPR000298 Cytochrome c oxidase subunit III-like IPR035973 Cytochrome c oxidase subunit III-like superfamily IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle IPR014246 Quinol oxidase subunit III IPR033946 Ubiquinol oxidase subunit III domain IPR005171 Cytochrome C oxidase subunit IV, prokaryotes IPR014250 Quinol oxidase subunit IV IPR013853 Galactitol permease IIC component IPR013014 Phosphotransferase system, EIIC component, type 2 IPR004703 Phosphotransferase system, sugar-specific permease component IPR020185 Spore morphogenesis/germination protein YwcE IPR004298 Nicotianamine synthase IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR016935 Opine metallophore dehydrogenase IPR011980 Nickel ABC transporter, substrate-binding protein NikA IPR030678 Peptide/nickel binding protein, MppA-type IPR039424 Solute-binding protein family 5 IPR023765 Solute-binding protein family 5, conserved site IPR000914 Solute-binding protein family 5 domain IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR025966 Oligopeptide transport permease C-like, N-terminal domain IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR036095 PTS system IIB component-like superfamily IPR013011 Phosphotransferase system, EIIB component, type 2 IPR003501 Phosphotransferase system, EIIB component, type 2/3 IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR041498 Bacterial Ig domain IPR013783 Immunoglobulin-like fold IPR000209 Peptidase S8/S53 domain IPR036852 Peptidase S8/S53 domain superfamily IPR022398 Peptidase S8, subtilisin, His-active site IPR023828 Peptidase S8, subtilisin, Ser-active site IPR015500 Peptidase S8, subtilisin-related IPR034084 Thermitase-like, domain IPR011991 ArsR-like helix-turn-helix domain IPR001845 HTH ArsR-type DNA-binding domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR014922 Domain of unknown function DUF1801 IPR016786 Uncharacterised protein YdeI, bacterial IPR001279 Metallo-beta-lactamase IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPR011042 Six-bladed beta-propeller, TolB-like IPR012938 Glucose/Sorbosone dehydrogenase IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase IPR001207 Transposase, mutator type IPR001207 Transposase, mutator type IPR001207 Transposase, mutator type IPR001207 Transposase, mutator type IPR001207 Transposase, mutator type IPR001207 Transposase, mutator type IPR001207 Transposase, mutator type IPR001207 Transposase, mutator type IPR001207 Transposase, mutator type IPR005119 LysR, substrate-binding IPR000847 Transcription regulator HTH, LysR IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR012544 Bacterial Pleckstrin homology domain IPR037063 Bacterial Pleckstrin homology domain superfamily IPR021722 Uncharacterised domain YvbH-like, oligomerisation domain IPR011006 CheY-like superfamily IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR000792 Transcription regulator LuxR, C-terminal IPR011006 CheY-like superfamily IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR000792 Transcription regulator LuxR, C-terminal IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase IPR033524 Leu/Phe/Val dehydrogenases active site IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain IPR014362 Glutamate dehydrogenase IPR036291 NAD(P)-binding domain superfamily IPR033922 NAD(P) binding domain of glutamate dehydrogenase IPR005119 LysR, substrate-binding IPR000847 Transcription regulator HTH, LysR IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR009057 Homeobox-like domain superfamily IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IPR008928 Six-hairpin glycosidase superfamily IPR012341 Six-hairpin glycosidase-like superfamily IPR002037 Glycoside hydrolase, family 8 IPR012906 PaaX-like, N-terminal IPR013225 PaaX-like, C-terminal IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX IPR036388 Winged helix-like DNA-binding domain superfamily IPR006938 Protein of unknown function DUF624 IPR008928 Six-hairpin glycosidase superfamily IPR012341 Six-hairpin glycosidase-like superfamily IPR000852 Glycoside hydrolase, family 52 IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR005119 LysR, substrate-binding IPR000847 Transcription regulator HTH, LysR IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR013785 Aldolase-type TIM barrel IPR000644 CBS domain IPR005990 Inosine-5'-monophosphate dehydrogenase IPR015875 IMP dehydrogenase / GMP reductase, conserved site IPR001093 IMP dehydrogenase/GMP reductase IPR028154 AMP-dependent ligase, C-terminal IPR000873 AMP-dependent synthetase/ligase IPR042099 AMP-dependent synthetase-like superfamily IPR011880 Phenylacetate-CoA ligase IPR011006 CheY-like superfamily IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR000792 Transcription regulator LuxR, C-terminal IPR011006 CheY-like superfamily IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR000792 Transcription regulator LuxR, C-terminal IPR001000 Glycoside hydrolase family 10 domain IPR031158 Glycosyl hydrolases family 10, active site IPR017853 Glycoside hydrolase superfamily IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR002781 Transmembrane protein TauE-like IPR001387 Cro/C1-type helix-turn-helix domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily IPR012347 Ferritin-like IPR009078 Ferritin-like superfamily IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C IPR022121 Peptidase M73, camelysin IPR023833 Signal peptide, camelysin IPR036286 LexA/Signal peptidase-like superfamily IPR001733 Peptidase S26B IPR011076 Malate synthase-like superfamily IPR023310 Malate synthase G, beta sub-domain IPR001465 Malate synthase IPR006253 Malate synthase G IPR016166 FAD-binding domain, PCMH-type IPR036318 FAD-binding, type PCMH-like superfamily IPR016164 FAD-linked oxidase-like, C-terminal IPR004113 FAD-linked oxidase, C-terminal IPR004490 Glycolate oxidase subunit GlcD IPR006094 FAD linked oxidase, N-terminal IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IPR004017 Cysteine-rich domain IPR012257 Glycolate oxidase, iron-sulphur subunit IPR009051 Alpha-helical ferredoxin IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IPR004017 Cysteine-rich domain IPR012257 Glycolate oxidase, iron-sulphur subunit IPR009051 Alpha-helical ferredoxin IPR016166 FAD-binding domain, PCMH-type IPR036318 FAD-binding, type PCMH-like superfamily IPR016164 FAD-linked oxidase-like, C-terminal IPR004113 FAD-linked oxidase, C-terminal IPR004490 Glycolate oxidase subunit GlcD IPR006094 FAD linked oxidase, N-terminal IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 IPR016166 FAD-binding domain, PCMH-type IPR036318 FAD-binding, type PCMH-like superfamily IPR016164 FAD-linked oxidase-like, C-terminal IPR004113 FAD-linked oxidase, C-terminal IPR004490 Glycolate oxidase subunit GlcD IPR006094 FAD linked oxidase, N-terminal IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 IPR029016 GAF-like domain superfamily IPR014757 Transcription regulator IclR, C-terminal IPR005471 Transcription regulator IclR, N-terminal IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR029016 GAF-like domain superfamily IPR014757 Transcription regulator IclR, C-terminal IPR005471 Transcription regulator IclR, N-terminal IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR007404 LexA-binding, inner membrane-associated putative hydrolase IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal IPR013760 DNA topoisomerase, type IIA-like domain superfamily IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily IPR005741 DNA topoisomerase IV subunit A, Gram-positive IPR002288 DNA gyrase B subunit, C-terminal IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes IPR020568 Ribosomal protein S5 domain 2-type fold IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPR001241 DNA topoisomerase, type IIA IPR013760 DNA topoisomerase, type IIA-like domain superfamily IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 IPR018522 DNA topoisomerase, type IIA, conserved site IPR006171 TOPRIM domain IPR003781 CoA-binding IPR036291 NAD(P)-binding domain superfamily IPR036291 NAD(P)-binding domain superfamily IPR002347 Short-chain dehydrogenase/reductase SDR IPR023772 DNA-binding HTH domain, TetR-type, conserved site IPR009057 Homeobox-like domain superfamily IPR001647 DNA-binding HTH domain, TetR-type IPR041490 HTH-type transcriptional repressor KstR2, C-terminal IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IPR017501 Phage infection protein, YhgE, C-terminal IPR017500 Phage infection protein, YhgE, N-terminal IPR023908 xxxLxxG heptad repeat IPR001333 Peptidase M32, carboxypeptidase Taq IPR000361 FeS cluster biogenesis IPR035903 HesB-like domain superfamily IPR008326 Uncharacterised conserved protein UCP034852 IPR000361 FeS cluster biogenesis IPR035903 HesB-like domain superfamily IPR008326 Uncharacterised conserved protein UCP034852 IPR036412 HAD-like superfamily IPR006439 HAD hydrolase, subfamily IA IPR041492 Haloacid dehalogenase-like hydrolase IPR023214 HAD superfamily IPR001544 Aminotransferase class IV IPR018300 Aminotransferase, class IV, conserved site IPR036038 Aminotransferase-like, PLP-dependent enzymes IPR005786 Branched-chain amino acid aminotransferase II IPR033939 Branched-chain aminotransferase IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR034904 Fe-S cluster assembly domain superfamily IPR002744 MIP18 family-like IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit IPR018170 Aldo/keto reductase, conserved site IPR020471 Aldo/keto reductase IPR023210 NADP-dependent oxidoreductase domain IPR036812 NADP-dependent oxidoreductase domain superfamily IPR018170 Aldo/keto reductase, conserved site IPR020471 Aldo/keto reductase IPR023210 NADP-dependent oxidoreductase domain IPR036812 NADP-dependent oxidoreductase domain superfamily IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IPR037523 Vicinal oxygen chelate (VOC) domain IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase IPR039793 Uroporphyrinogen-III synthase IPR004104 Oxidoreductase, C-terminal IPR036291 NAD(P)-binding domain superfamily IPR000683 Oxidoreductase, N-terminal IPR007045 5-keto 4-deoxyuronate isomerase IPR021120 KduI/IolB isomerase IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal IPR014710 RmlC-like jelly roll fold IPR011051 RmlC-like cupin domain superfamily IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase IPR036291 NAD(P)-binding domain superfamily IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR002347 Short-chain dehydrogenase/reductase SDR IPR014036 DeoR C-terminal sensor domain IPR001034 DeoR-type HTH domain IPR037171 NagB/RpiA transferase-like IPR018356 Transcription regulator, HTH DeoR-type, conserved site IPR036390 Winged helix DNA-binding domain superfamily IPR014036 DeoR C-terminal sensor domain IPR001034 DeoR-type HTH domain IPR037171 NagB/RpiA transferase-like IPR018356 Transcription regulator, HTH DeoR-type, conserved site IPR036390 Winged helix DNA-binding domain superfamily IPR001123 Amino acid exporter protein, LeuE-type IPR004841 Amino acid permease/ SLC12A domain IPR034904 Fe-S cluster assembly domain superfamily IPR002744 MIP18 family-like IPR029058 Alpha/Beta hydrolase fold IPR002925 Dienelactone hydrolase IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IPR037523 Vicinal oxygen chelate (VOC) domain IPR000620 EamA domain IPR029045 ClpP/crotonase-like domain superfamily IPR018376 Enoyl-CoA hydratase/isomerase, conserved site IPR001753 Enoyl-CoA hydratase/isomerase IPR014748 Enoyl-CoA hydratase, C-terminal IPR013107 Acyl-CoA dehydrogenase, C-terminal domain IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IPR036250 Acyl-CoA dehydrogenase-like, C-terminal IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily IPR003593 AAA+ ATPase domain IPR003959 ATPase, AAA-type, core IPR019489 Clp ATPase, C-terminal IPR001270 ClpA/B family IPR018368 ClpA/B, conserved site 1 IPR028299 ClpA/B, conserved site 2 IPR041546 ClpA/ClpB, AAA lid domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR001943 UVR domain IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal IPR002421 5'-3' exonuclease, N-terminal IPR036279 5'-3' exonuclease, C-terminal domain superfamily IPR020045 DNA polymerase I-like, H3TH domain IPR038969 Flap endonuclease IPR008918 Helix-hairpin-helix motif, class 2 IPR029060 PIN-like domain superfamily IPR000209 Peptidase S8/S53 domain IPR036852 Peptidase S8/S53 domain superfamily IPR023827 Peptidase S8, subtilisin, Asp-active site IPR022398 Peptidase S8, subtilisin, His-active site IPR023828 Peptidase S8, subtilisin, Ser-active site IPR015500 Peptidase S8, subtilisin-related IPR034202 Subtilisin Carlsberg-like catalytic domain IPR029045 ClpP/crotonase-like domain superfamily IPR001753 Enoyl-CoA hydratase/isomerase IPR014748 Enoyl-CoA hydratase, C-terminal IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB IPR001478 PDZ domain IPR036034 PDZ superfamily IPR011782 Peptidase S1C, Do IPR009003 Peptidase S1, PA clan IPR001940 Peptidase S1C IPR011428 Spore coat protein X/V IPR001279 Metallo-beta-lactamase IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPR004839 Aminotransferase, class I/classII IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR016161 Aldehyde/histidinol dehydrogenase IPR016163 Aldehyde dehydrogenase, C-terminal IPR016160 Aldehyde dehydrogenase, cysteine active site IPR029510 Aldehyde dehydrogenase, glutamic acid active site IPR016162 Aldehyde dehydrogenase, N-terminal IPR015590 Aldehyde dehydrogenase domain IPR011264 Betaine aldehyde dehydrogenase IPR002305 Aminoacyl-tRNA synthetase, class Ic IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR002306 Tryptophan-tRNA ligase IPR024109 Tryptophan-tRNA ligase, bacterial-type IPR032816 SNARE associated Golgi protein IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain IPR000089 Biotin/lipoyl attachment IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IPR036625 E3-binding domain superfamily IPR004167 Peripheral subunit-binding domain IPR011053 Single hybrid motif IPR006255 Dihydrolipoamide succinyltransferase IPR011603 2-oxoglutarate dehydrogenase E1 component IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial IPR001017 Dehydrogenase, E1 component IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily IPR029061 Thiamin diphosphate-binding fold IPR005475 Transketolase-like, pyrimidine-binding domain IPR022694 3-hydroxyacyl-CoA dehydrogenase IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPR013328 6-phosphogluconate dehydrogenase, domain 2 IPR036291 NAD(P)-binding domain superfamily IPR006164 Ku70/Ku80 beta-barrel domain IPR009187 Non-homologous end joining protein Ku, prokaryotic type IPR016194 SPOC-like, C-terminal domain superfamily IPR012310 DNA ligase, ATP-dependent, central IPR014146 DNA ligase D, ligase domain IPR033652 LigD polymerase domain, type 3 IPR014145 DNA ligase D, polymerase domain IPR014143 DNA ligase D IPR036291 NAD(P)-binding domain superfamily IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR002347 Short-chain dehydrogenase/reductase SDR IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA IPR042118 QueA, domain 1 IPR042119 QueA, domain 2 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily IPR003018 GAF domain IPR029016 GAF-like domain superfamily IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain IPR036878 Glucose permease domain IIB IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site IPR003352 Phosphotransferase system, EIIC IPR013013 Phosphotransferase system, EIIC component, type 1 IPR001996 Phosphotransferase system, IIB component, type 1 IPR011296 Phosphotransferase system, trehalose-specific IIBC component IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component IPR012338 Beta-lactamase/transpeptidase-like IPR015956 Penicillin-binding protein, C-terminal domain superfamily IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal IPR012793 Beta-ketoadipyl CoA thiolase IPR002155 Thiolase IPR016039 Thiolase-like IPR020615 Thiolase, acyl-enzyme intermediate active site IPR020610 Thiolase, active site IPR020617 Thiolase, C-terminal IPR020613 Thiolase, conserved site IPR020616 Thiolase, N-terminal IPR000843 LacI-type HTH domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR028082 Periplasmic binding protein-like I IPR004104 Oxidoreductase, C-terminal IPR030827 Inositol 2-dehydrogenase IPR036291 NAD(P)-binding domain superfamily IPR000683 Oxidoreductase, N-terminal IPR004104 Oxidoreductase, C-terminal IPR030827 Inositol 2-dehydrogenase IPR036291 NAD(P)-binding domain superfamily IPR000683 Oxidoreductase, N-terminal IPR038377 Sodium/glucose symporter superfamily IPR001734 Sodium/solute symporter IPR018212 Sodium/solute symporter, conserved site IPR013785 Aldolase-type TIM barrel IPR038417 Alpha-galactosidase, N-terminal domain superfamily IPR000111 Glycoside hydrolase family 27/36, conserved site IPR002252 Glycoside hydrolase family 36 IPR031705 Glycosyl hydrolase family 36, C-terminal IPR031704 Glycosyl hydrolase family 36, N-terminal IPR013780 Glycosyl hydrolase, all-beta IPR017853 Glycoside hydrolase superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR006059 Bacterial extracellular solute-binding protein IPR000843 LacI-type HTH domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR028082 Periplasmic binding protein-like I IPR019802 Glycoside hydrolase, family 4, conserved site IPR001088 Glycoside hydrolase, family 4 IPR022616 Glycosyl hydrolase, family 4, C-terminal IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal IPR036291 NAD(P)-binding domain superfamily IPR003313 AraC-type arabinose-binding/dimerisation domain IPR009057 Homeobox-like domain superfamily IPR037923 Transcription regulator HTH-like IPR018060 DNA binding HTH domain, AraC-type IPR018062 HTH domain AraC-type, conserved site IPR020449 Transcription regulator HTH, AraC- type IPR001173 Glycosyltransferase 2-like IPR029044 Nucleotide-diphospho-sugar transferases IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA IPR011006 CheY-like superfamily IPR001867 OmpR/PhoB-type DNA-binding domain IPR001789 Signal transduction response regulator, receiver domain IPR039420 Transcriptional regulatory protein WalR-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR011006 CheY-like superfamily IPR000160 GGDEF domain IPR029787 Nucleotide cyclase IPR001789 Signal transduction response regulator, receiver domain IPR029479 Nitroreductase IPR000415 Nitroreductase-like IPR016161 Aldehyde/histidinol dehydrogenase IPR016163 Aldehyde dehydrogenase, C-terminal IPR016160 Aldehyde dehydrogenase, cysteine active site IPR016162 Aldehyde dehydrogenase, N-terminal IPR015590 Aldehyde dehydrogenase domain IPR023485 Phosphotyrosine protein phosphatase I IPR036196 Phosphotyrosine protein phosphatase I superfamily IPR017867 Protein-tyrosine phosphatase, low molecular weight IPR007815 Erythromycin esterase IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 IPR024924 7-carboxy-7-deazaguanine synthase-like IPR013785 Aldolase-type TIM barrel IPR017742 7-carboxy-7-deazaguanine synthase IPR007197 Radical SAM IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily IPR018317 Queuosine biosynthesis protein QueC IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR035097 Peptidase M29, N-terminal IPR000787 Peptidase M29 IPR029058 Alpha/Beta hydrolase fold IPR013094 Alpha/beta hydrolase fold-3 IPR002569 Peptide methionine sulphoxide reductase MsrA IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain IPR020139 Protein of unknown function DUF2642 IPR013785 Aldolase-type TIM barrel IPR025895 Lysine-2,3-aminomutase, C-terminal domain IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase IPR022459 Lysine-2,3-aminomutase IPR001080 3Fe-4S ferredoxin IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPR001080 3Fe-4S ferredoxin IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPR012791 3-oxoacid CoA-transferase, subunit B IPR004165 Coenzyme A transferase family I IPR037171 NagB/RpiA transferase-like IPR012792 3-oxoacid CoA-transferase, subunit A IPR004165 Coenzyme A transferase family I IPR004163 Coenzyme A transferase binding site IPR037171 NagB/RpiA transferase-like IPR005814 Aminotransferase class-III IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR011006 CheY-like superfamily IPR001867 OmpR/PhoB-type DNA-binding domain IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR039420 Transcriptional regulatory protein WalR-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR001466 Beta-lactamase-related IPR012338 Beta-lactamase/transpeptidase-like IPR021860 Peptidase S12, Pab87-related, C-terminal IPR013785 Aldolase-type TIM barrel IPR004136 Nitronate monooxygenase IPR013785 Aldolase-type TIM barrel IPR004136 Nitronate monooxygenase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR002068 Alpha crystallin/Hsp20 domain IPR031107 Small heat shock protein HSP20 IPR008978 HSP20-like chaperone IPR001633 EAL domain IPR035919 EAL domain superfamily IPR029151 Periplasmic sensor-like domain superfamily IPR018842 YkuI, C-terminal IPR001451 Hexapeptide repeat IPR011004 Trimeric LpxA-like superfamily IPR002563 Flavin reductase like domain IPR012349 FMN-binding split barrel IPR029058 Alpha/Beta hydrolase fold IPR000073 Alpha/beta hydrolase fold-1 IPR000639 Epoxide hydrolase-like IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal IPR029062 Class I glutamine amidotransferase-like IPR005697 Homoserine O-succinyltransferase MetA IPR033752 MetA family IPR004013 PHP domain IPR003141 Polymerase/histidinol phosphatase, N-terminal IPR016195 Polymerase/histidinol phosphatase-like IPR004013 PHP domain IPR003141 Polymerase/histidinol phosphatase, N-terminal IPR016195 Polymerase/histidinol phosphatase-like IPR022310 NAD/GMP synthase IPR003694 NAD(+) synthetase IPR022926 NH(3)-dependent NAD(+) synthetase IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR017524 Small acid-soluble spore protein, thioredoxin-like IPR011991 ArsR-like helix-turn-helix domain IPR000485 AsnC-type HTH domain IPR011008 Dimeric alpha-beta barrel IPR019888 Transcription regulator AsnC-type IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR011991 ArsR-like helix-turn-helix domain IPR000485 AsnC-type HTH domain IPR011008 Dimeric alpha-beta barrel IPR019888 Transcription regulator AsnC-type IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR011991 ArsR-like helix-turn-helix domain IPR000485 AsnC-type HTH domain IPR011008 Dimeric alpha-beta barrel IPR019888 Transcription regulator AsnC-type IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR029069 HotDog domain superfamily IPR006683 Thioesterase domain IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family IPR003593 AAA+ ATPase domain IPR041627 CbbX, AAA lid domain IPR003959 ATPase, AAA-type, core IPR000641 CbxX/CfxQ IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR014232 Sporulation stage V, protein K IPR003593 AAA+ ATPase domain IPR041627 CbbX, AAA lid domain IPR003959 ATPase, AAA-type, core IPR000641 CbxX/CfxQ IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR014232 Sporulation stage V, protein K IPR041704 CFLE, GH18 catalytic domain IPR011583 Chitinase II IPR029070 Chitinase insertion domain superfamily IPR001223 Glycoside hydrolase family 18, catalytic domain IPR017853 Glycoside hydrolase superfamily IPR018392 LysM domain IPR036779 LysM domain superfamily IPR032816 SNARE associated Golgi protein IPR015414 Transmembrane protein TMEM64 IPR012612 Small acid-soluble spore protein, SspN IPR001017 Dehydrogenase, E1 component IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha IPR029061 Thiamin diphosphate-binding fold IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel IPR006249 Aconitase/Iron-responsive element-binding protein 2 IPR018136 Aconitase family, 4Fe-4S cluster binding site IPR036008 Aconitase, iron-sulfur domain IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain IPR012613 Small acid-soluble spore protein, SspO IPR012614 Small acid-soluble spore protein, SspP IPR040170 Cytosolic acyl coenzyme A thioester hydrolase IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain IPR029069 HotDog domain superfamily IPR006683 Thioesterase domain IPR040170 Cytosolic acyl coenzyme A thioester hydrolase IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain IPR029069 HotDog domain superfamily IPR006683 Thioesterase domain IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type IPR005835 Nucleotidyl transferase domain IPR029044 Nucleotide-diphospho-sugar transferases IPR001509 NAD-dependent epimerase/dehydratase IPR036291 NAD(P)-binding domain superfamily IPR001296 Glycosyl transferase, family 1 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain IPR002575 Aminoglycoside phosphotransferase IPR011009 Protein kinase-like domain superfamily IPR014255 Spore coat protein CotS IPR029061 Thiamin diphosphate-binding fold IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II IPR005475 Transketolase-like, pyrimidine-binding domain IPR033248 Transketolase, C-terminal domain IPR018385 C4-dicarboxylate anaerobic carrier-like IPR017593 Allantoinase IPR006680 Amidohydrolase-related IPR002195 Dihydroorotase, conserved site IPR011059 Metal-dependent hydrolase, composite domain superfamily IPR032466 Metal-dependent hydrolase IPR036237 Xylose isomerase-like superfamily IPR013022 Xylose isomerase-like, TIM barrel domain IPR016161 Aldehyde/histidinol dehydrogenase IPR016163 Aldehyde dehydrogenase, C-terminal IPR016160 Aldehyde dehydrogenase, cysteine active site IPR016162 Aldehyde dehydrogenase, N-terminal IPR015590 Aldehyde dehydrogenase domain IPR010061 Methylmalonate-semialdehyde dehydrogenase IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria IPR000843 LacI-type HTH domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR028082 Periplasmic binding protein-like I IPR013785 Aldolase-type TIM barrel IPR000771 Fructose-bisphosphate aldolase, class-II IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 IPR036237 Xylose isomerase-like superfamily IPR013022 Xylose isomerase-like, TIM barrel domain IPR004104 Oxidoreductase, C-terminal IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase IPR036291 NAD(P)-binding domain superfamily IPR000683 Oxidoreductase, N-terminal IPR023952 Inosose dehydratase IPR030823 IolE/MocC family IPR036237 Xylose isomerase-like superfamily IPR013022 Xylose isomerase-like, TIM barrel domain IPR013785 Aldolase-type TIM barrel IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ IPR033755 PdxS/SNZ N-terminal domain IPR011060 Ribulose-phosphate binding barrel IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain IPR000089 Biotin/lipoyl attachment IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IPR036625 E3-binding domain superfamily IPR004167 Peripheral subunit-binding domain IPR011053 Single hybrid motif IPR029035 DHS-like NAD/FAD-binding domain superfamily IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes IPR029061 Thiamin diphosphate-binding fold IPR012000 Thiamine pyrophosphate enzyme, central domain IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain IPR000399 TPP-binding enzyme, conserved site IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding IPR002173 Carbohydrate/puine kinase, PfkB, conserved site IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes IPR030830 5-Dehydro-2-deoxygluconokinase IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily IPR011611 Carbohydrate kinase PfkB IPR029056 Ribokinase-like IPR024203 5-deoxy-glucuronate isomerase, IolB IPR023770 5-deoxy-glucuronate isomerase, Bacilli IPR021120 KduI/IolB isomerase IPR014710 RmlC-like jelly roll fold IPR011051 RmlC-like cupin domain superfamily IPR001851 ABC transporter, permease IPR001851 ABC transporter, permease IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR015861 ABC transporter, ribose import, RbsA IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR028082 Periplasmic binding protein-like I IPR025997 Periplasmic binding protein IPR028082 Periplasmic binding protein-like I IPR025997 Periplasmic binding protein IPR018170 Aldo/keto reductase, conserved site IPR020471 Aldo/keto reductase IPR023210 NADP-dependent oxidoreductase domain IPR036812 NADP-dependent oxidoreductase domain superfamily IPR036188 FAD/NAD(P)-binding domain superfamily IPR023753 FAD/NAD(P)-binding domain IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily IPR006258 Dihydrolipoamide dehydrogenase IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site IPR036188 FAD/NAD(P)-binding domain superfamily IPR023753 FAD/NAD(P)-binding domain IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily IPR006258 Dihydrolipoamide dehydrogenase IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site IPR008141 Alanine dehydrogenase IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain IPR036291 NAD(P)-binding domain superfamily IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR004033 UbiE/COQ5 methyltransferase IPR023576 UbiE/COQ5 methyltransferase, conserved site IPR020203 Uncharacterised protein family, YneK IPR031306 CcdC protein IPR003593 AAA+ ATPase domain IPR011527 ABC transporter type 1, transmembrane domain IPR036640 ABC transporter type 1, transmembrane domain superfamily IPR003439 ABC transporter-like IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR039421 Type I protein exporter IPR003593 AAA+ ATPase domain IPR011527 ABC transporter type 1, transmembrane domain IPR036640 ABC transporter type 1, transmembrane domain superfamily IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR039421 Type I protein exporter IPR025948 HTH-like domain IPR001584 Integrase, catalytic core IPR012337 Ribonuclease H-like superfamily IPR036397 Ribonuclease H superfamily IPR025948 HTH-like domain IPR001584 Integrase, catalytic core IPR012337 Ribonuclease H-like superfamily IPR036397 Ribonuclease H superfamily IPR025948 HTH-like domain IPR001584 Integrase, catalytic core IPR012337 Ribonuclease H-like superfamily IPR036397 Ribonuclease H superfamily IPR025948 HTH-like domain IPR001584 Integrase, catalytic core IPR012337 Ribonuclease H-like superfamily IPR036397 Ribonuclease H superfamily IPR025948 HTH-like domain IPR001584 Integrase, catalytic core IPR012337 Ribonuclease H-like superfamily IPR036397 Ribonuclease H superfamily IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase IPR033524 Leu/Phe/Val dehydrogenases active site IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal IPR036291 NAD(P)-binding domain superfamily IPR011010 DNA breaking-rejoining enzyme, catalytic core IPR013762 Integrase-like, catalytic domain superfamily IPR002104 Integrase, catalytic domain IPR010998 Integrase/recombinase, N-terminal IPR004107 Integrase, SAM-like, N-terminal IPR023009 Tyrosine recombinase XerC/XerD IPR005359 Protein with unknown function UPF0154 IPR019683 Sporulation inhibitor of replication protein SirA IPR038449 SirA superfamily IPR029061 Thiamin diphosphate-binding fold IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II IPR005475 Transketolase-like, pyrimidine-binding domain IPR005478 Transketolase, bacterial-like IPR020826 Transketolase binding site IPR033248 Transketolase, C-terminal domain IPR033247 Transketolase family IPR005474 Transketolase, N-terminal IPR009242 Protein of unknown function DUF896 IPR006119 Resolvase, N-terminal catalytic domain IPR036162 Resolvase-like, N-terminal catalytic domain superfamily IPR011991 ArsR-like helix-turn-helix domain IPR006200 Transcription regulator LexA IPR039418 LexA-like IPR036286 LexA/Signal peptidase-like superfamily IPR006199 LexA repressor, DNA-binding domain IPR006197 Peptidase S24, LexA-like IPR015927 Peptidase S24/S26A/S26B/S26C IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR021617 Protein of unknown function DUF3231 IPR012347 Ferritin-like IPR008147 Glutamine synthetase, beta-Grasp domain IPR036651 Glutamine synthetase, N-terminal domain superfamily IPR014746 Glutamine synthetase/guanido kinase, catalytic domain IPR008146 Glutamine synthetase, catalytic domain IPR027303 Glutamine synthetase, glycine-rich site IPR004809 Glutamine synthetase type I IPR001637 Glutamine synthetase class-I, adenylation site IPR027302 Glutamine synthetase, N-terminal conserved site IPR009651 Putative methionine gamma-lyase IPR015424 Pyridoxal phosphate-dependent transferase IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR030394 HflX-type guanine nucleotide-binding (G) domain IPR032305 GTP-binding protein, middle domain IPR006073 GTP binding domain IPR016496 GTPase HflX IPR025121 GTPase HflX, N-terminal IPR042108 GTPase HflX, N-terminal domain superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005225 Small GTP-binding protein domain IPR005001 RNA-binding protein Hfq IPR010920 LSM domain superfamily IPR039657 Dimethylallyltransferase IPR018022 IPP transferase IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR007536 Ribosomal RNA small subunit methyltransferase J IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR016152 Phosphotransferase/anion transporter IPR002178 PTS EIIA type-2 domain IPR014762 DNA mismatch repair, conserved site IPR020667 DNA mismatch repair protein, MutL IPR002099 DNA mismatch repair protein family, N-terminal IPR013507 DNA mismatch repair protein, S5 domain 2-like IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR038973 DNA mismatch repair protein MutL/Mlh/Pms IPR014790 MutL, C-terminal, dimerisation IPR042120 MutL, C-terminal domain, dimerisation subdomain IPR042121 MutL, C-terminal domain, regulatory subdomain IPR037198 MutL, C-terminal domain superfamily IPR020568 Ribosomal protein S5 domain 2-type fold IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPR005748 DNA mismatch repair protein MutS IPR007695 DNA mismatch repair protein MutS-like, N-terminal IPR017261 DNA mismatch repair protein MutS/MSH IPR000432 DNA mismatch repair protein MutS, C-terminal IPR007861 DNA mismatch repair protein MutS, clamp IPR007696 DNA mismatch repair protein MutS, core IPR016151 DNA mismatch repair protein MutS, N-terminal IPR036187 DNA mismatch repair protein MutS, core domain superfamily IPR007860 DNA mismatch repair protein MutS, connector domain IPR036678 MutS, connector domain superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR018901 Spore coat protein CotE IPR016783 Biofilm formation YmcA IPR010368 Control of competence regulator ComK, YlbF/YmcA IPR023378 YheA/YmcA-like domain superfamily IPR006638 Elp3/MiaB/NifB IPR005839 Methylthiotransferase IPR020612 Methylthiotransferase, conserved site IPR013848 Methylthiotransferase, N-terminal IPR038135 Methylthiotransferase, N-terminal domain superfamily IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB IPR007197 Radical SAM IPR023404 Radical SAM, alpha/beta horseshoe IPR002792 TRAM domain IPR029061 Thiamin diphosphate-binding fold IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding IPR036882 Alba-like domain superfamily IPR007347 Sporulation stage V, protein S IPR029052 Metallo-dependent phosphatase-like IPR005235 Metallophosphoesterase, YmdB-like IPR016152 Phosphotransferase/anion transporter IPR002178 PTS EIIA type-2 domain IPR003607 HD/PDEase domain IPR006674 HD domain IPR006675 HDIG domain IPR004087 K Homology domain IPR004088 K Homology domain, type 1 IPR036612 K Homology domain, type 1 superfamily IPR017705 Ribonuclease Y IPR022711 Ribonuclease Y, N-terminal IPR001238 DNA-binding, RecF IPR018078 DNA-binding, RecF, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003395 RecF/RecN/SMC, N-terminal IPR042174 DNA-binding RecF, domain 2 IPR003593 AAA+ ATPase domain IPR013765 DNA recombination and repair protein RecA IPR020584 DNA recombination/repair protein RecA, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain IPR023400 DNA recombination and repair protein RecA, C-terminal IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface IPR011545 DEAD/DEAH box helicase domain IPR030880 DEAD-box ATP-dependent RNA helicase CshA IPR014001 Helicase superfamily 1/2, ATP-binding domain IPR001650 Helicase, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site IPR014014 RNA helicase, DEAD-box type, Q motif IPR036653 CinA-like, C-terminal IPR008136 CinA, C-terminal IPR041424 CinA, KH domain IPR008135 Competence-induced protein CinA IPR036425 MoaB/Mog-like domain superfamily IPR001453 MoaB/Mog domain IPR000462 CDP-alcohol phosphatidyltransferase IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase IPR007551 Protein of unknown function DUF520 IPR035571 UPF0234-like, C-terminal IPR035570 UPF0234, N-terminal IPR036183 YajQ-like superfamily IPR036095 PTS system IIB component-like superfamily IPR013011 Phosphotransferase system, EIIB component, type 2 IPR003501 Phosphotransferase system, EIIB component, type 2/3 IPR025194 Domain of unknown function DUF4115 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR002912 ACT domain IPR024514 Domain of unknown function DUF3388 IPR016784 Uncharacterised protein UCP021288 with ACT domain IPR021637 Protein of unknown function DUF3243 IPR024702 Uncharacterised conserved protein YmfJ IPR038292 YmfJ/YflH superfamily IPR036291 NAD(P)-binding domain superfamily IPR002347 Short-chain dehydrogenase/reductase SDR IPR011249 Metalloenzyme, LuxS/M16 peptidase-like IPR011765 Peptidase M16, N-terminal IPR007863 Peptidase M16, C-terminal IPR011249 Metalloenzyme, LuxS/M16 peptidase-like IPR007863 Peptidase M16, C-terminal IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IPR000524 Transcription regulator HTH, GntR IPR011663 UbiC transcription regulator-associated IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR003593 AAA+ ATPase domain IPR041027 FtsK alpha domain IPR002543 FtsK domain IPR018541 FtsK gamma domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR029045 ClpP/crotonase-like domain superfamily IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA IPR004703 Phosphotransferase system, sugar-specific permease component IPR001279 Metallo-beta-lactamase IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain IPR004613 Ribonuclease J IPR042173 Ribonuclease J, domain 2 IPR030854 Ribonuclease J, bacteria IPR041636 Ribonuclease J, C-terminal IPR013785 Aldolase-type TIM barrel IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA IPR002220 DapA-like IPR020625 Schiff base-forming aldolase, active site IPR020624 Schiff base-forming aldolase, conserved site IPR036393 Acetylglutamate kinase-like superfamily IPR002912 ACT domain IPR001048 Aspartate/glutamate/uridylate kinase IPR005260 Aspartate kinase, monofunctional class IPR001341 Aspartate kinase IPR018042 Aspartate kinase, conserved site IPR027795 CASTOR, ACT domain IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site IPR012080 Aspartate-semialdehyde dehydrogenase IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type IPR036291 NAD(P)-binding domain superfamily IPR000534 Semialdehyde dehydrogenase, NAD-binding IPR012280 Semialdehyde dehydrogenase, dimerisation domain IPR014214 Dipicolinic acid synthetase, subunit B IPR036551 Flavin prenyltransferase-like IPR003382 Flavoprotein IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain IPR014215 Dipicolinic acid synthetase subunit A IPR031629 Dipicolinate synthase subunit A, N-terminal IPR036291 NAD(P)-binding domain superfamily IPR027275 PRC-barrel domain IPR011033 PRC-barrel-like superfamily IPR014238 Sporulation protein YlmC/YmxH IPR011249 Metalloenzyme, LuxS/M16 peptidase-like IPR011765 Peptidase M16, N-terminal IPR001431 Peptidase M16, zinc-binding site IPR007863 Peptidase M16, C-terminal IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel IPR002509 NodB homology domain IPR014228 Sporulation protein, polysaccharide deacetylase, YlxY IPR010916 TonB box, conserved site IPR001247 Exoribonuclease, phosphorolytic domain 1 IPR015847 Exoribonuclease, phosphorolytic domain 2 IPR036345 Exoribonuclease, PH domain 2 superfamily IPR004087 K Homology domain IPR004088 K Homology domain, type 1 IPR036612 K Homology domain, type 1 superfamily IPR012340 Nucleic acid-binding, OB-fold IPR012162 Polyribonucleotide nucleotidyltransferase IPR027408 PNPase/RNase PH domain superfamily IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain IPR020568 Ribosomal protein S5 domain 2-type fold IPR022967 RNA-binding domain, S1 IPR003029 S1 domain IPR000589 Ribosomal protein S15 IPR005290 Ribosomal protein S15, bacterial-type IPR009068 S15/NS1, RNA-binding IPR004821 Cytidyltransferase-like domain IPR015864 FAD synthetase IPR023468 Riboflavin kinase IPR002606 Riboflavin kinase, bacterial IPR015865 Riboflavin kinase domain, bacterial/eukaryotic IPR023465 Riboflavin kinase domain superfamily IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR020103 Pseudouridine synthase, catalytic domain superfamily IPR002501 Pseudouridine synthase II, N-terminal IPR014780 tRNA pseudouridine synthase II, TruB IPR032819 tRNA pseudouridylate synthase B, C-terminal IPR015946 K homology domain-like, alpha/beta IPR000238 Ribosome-binding factor A IPR023799 Ribosome-binding factor A domain superfamily IPR020053 Ribosome-binding factor A, conserved site IPR007546 Protein of unknown function DUF503 IPR036746 TT1725-like superfamily IPR006847 Translation initiation factor IF-2, N-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005225 Small GTP-binding protein domain IPR000795 Transcription factor, GTP-binding domain IPR000178 Translation initiation factor aIF-2, bacterial-like IPR015760 Translation initiation factor IF- 2 IPR023115 Translation initiation factor IF- 2, domain 3 IPR036925 Translation initiation factor IF-2, domain 3 superfamily IPR009000 Translation protein, beta-barrel domain superfamily IPR039109 Ribosomal protein L30/YlxQ IPR029064 50S ribosomal protein L30e-like IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 IPR004037 Ribosomal protein L7Ae conserved site IPR039107 Ribosomal protein YlxQ IPR007393 Domain of unknown function DUF448 IPR037465 Uncharacterized protein YlxR IPR035931 YlxR-like superfamily IPR004087 K Homology domain IPR015946 K homology domain-like, alpha/beta IPR025249 KH domain, NusA-like IPR009019 K homology domain superfamily, prokaryotic type IPR012340 Nucleic acid-binding, OB-fold IPR030842 Transcription termination/antitermination protein NusA, bacterial IPR036555 NusA, N-terminal domain superfamily IPR022967 RNA-binding domain, S1 IPR003029 S1 domain IPR013735 Transcription factor NusA, N-terminal IPR010213 Transcription termination factor NusA IPR003728 Ribosome maturation factor RimP IPR028998 Ribosome maturation factor RimP, C-terminal IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily IPR028989 Ribosome maturation factor RimP, N-terminal IPR035956 RimP, N-terminal domain superfamily IPR029062 Class I glutamine amidotransferase-like IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO IPR021196 PdxT/SNO family, conserved site IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain IPR040982 DNA polymerase III alpha subunit finger domain IPR024754 DNA polymerase III polC-like, N-terminal domain II IPR028112 DNA polymerase III polC-type, N-terminal domain I IPR029460 DNA polymerase, helix-hairpin-helix motif IPR006054 DNA polymerase III epsilon subunit, exonuclease domain IPR013520 Exonuclease, RNase T/DNA polymerase III IPR012340 Nucleic acid-binding, OB-fold IPR004013 PHP domain IPR003141 Polymerase/histidinol phosphatase, N-terminal IPR006308 DNA polymerase III, alpha subunit, Gram-positive type IPR012337 Ribonuclease H-like superfamily IPR036397 Ribonuclease H superfamily IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) IPR006195 Aminoacyl-tRNA synthetase, class II IPR004154 Anticodon-binding IPR036621 Anticodon-binding domain superfamily IPR002316 Proline-tRNA ligase, class IIa IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 IPR033730 Prokaryote proline-tRNA ligase core domain IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain IPR001478 PDZ domain IPR041489 PDZ domain 6 IPR036034 PDZ superfamily IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase IPR008915 Peptidase M50 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal IPR026877 DXP reductoisomerase C-terminal domain IPR036169 DXP reductoisomerase, C-terminal domain superfamily IPR036291 NAD(P)-binding domain superfamily IPR000374 Phosphatidate cytidylyltransferase IPR001441 Decaprenyl diphosphate synthase-like IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site IPR036424 Decaprenyl diphosphate synthase-like superfamily IPR002661 Ribosome recycling factor IPR023584 Ribosome recycling factor domain IPR036191 RRF superfamily IPR036393 Acetylglutamate kinase-like superfamily IPR001048 Aspartate/glutamate/uridylate kinase IPR011817 Uridylate kinase IPR015963 Uridylate kinase, bacteria IPR036402 Elongation factor Ts, dimerisation domain superfamily IPR001816 Translation elongation factor EFTs/EF1B IPR014039 Translation elongation factor EFTs/EF1B, dimerisation IPR018101 Translation elongation factor Ts, conserved site IPR009060 UBA-like superfamily IPR001865 Ribosomal protein S2 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid IPR018130 Ribosomal protein S2, conserved site IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily IPR024087 Creatininase-like superfamily IPR003785 Creatininase/formamide hydrolase IPR014284 RNA polymerase sigma-70 like domain IPR000943 RNA polymerase sigma-70 IPR007627 RNA polymerase sigma-70 region 2 IPR007624 RNA polymerase sigma-70 region 3 IPR007630 RNA polymerase sigma-70 region 4 IPR012845 RNA polymerase sigma factor, FliA/WhiG IPR013325 RNA polymerase sigma factor, region 2 IPR013324 RNA polymerase sigma factor, region 3/4-like IPR038592 CheD-like superfamily IPR005659 Chemoreceptor glutamine deamidase CheD IPR011324 Cytotoxic necrotizing factor-like, catalytic IPR007597 CheC-like protein IPR028976 CheC-like superfamily IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type IPR035909 Methylesterase CheB, C-terminal IPR011006 CheY-like superfamily IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase IPR001789 Signal transduction response regulator, receiver domain IPR025501 ATP binding protein MinD IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 IPR020006 Flagellar biosynthesis protein FlhF IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain IPR035472 RpiR-like, SIS domain IPR001347 Sugar isomerase (SIS) IPR022951 Uncharacterised protein family UPF0309 IPR042194 FHIPEP, domain 1 IPR042193 FHIPEP, domain 3 IPR042196 FHIPEP, domain 4 IPR025505 FHIPEP conserved site IPR006301 Flagellar biosynthesis protein FlhA IPR001712 Type III secretion system FHIPEP IPR006136 Flagellar biosynthetic protein FlhB IPR006135 Type III secretion system substrate exporter IPR029025 Type III secretion system substrate exporter, C-terminal IPR006303 Flagellar biosynthesis protein FliR IPR002010 Type III secretion system inner membrane R protein IPR002191 Bacterial export protein family 3 IPR006305 Flagellar biosynthesis protein FliQ IPR005837 Flagellar transport protein FliP IPR005838 Type III secretion system inner membrane P protein IPR022781 Flagellar biosynthesis protein, FliO IPR011006 CheY-like superfamily IPR001789 Signal transduction response regulator, receiver domain IPR011006 CheY-like superfamily IPR001789 Signal transduction response regulator, receiver domain IPR007597 CheC-like protein IPR028976 CheC-like superfamily IPR012826 Flagellar motor switch FliN IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb IPR001543 Surface presentation of antigen (SpoA) IPR036429 SpoA-like superfamily IPR028976 CheC-like superfamily IPR001689 Flagellar motor switch protein FliM IPR001543 Surface presentation of antigen (SpoA) IPR036429 SpoA-like superfamily IPR009384 Swarming motility protein SwrD-like IPR001444 Flagellar basal body rod protein, N-terminal IPR019776 Flagellar basal body rod protein, conserved site IPR020013 Flagellar hook-basal body protein, FlgE/F/G IPR010930 Flagellar basal-body/hook protein, C-terminal domain IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like IPR012836 Flagellar basal-body rod FlgF IPR005648 Flagellar hook capping protein IPR003593 AAA+ ATPase domain IPR000225 Armadillo IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IPR032463 ATPase, type III secretion system, FliI IPR005714 ATPase, type III secretion system, FliI/YscN IPR022425 Flagellar export ATPase FliI, clade 2 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR040627 T3SS EscN ATPase, C-terminal IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE IPR022524 Flagellar assembly FliH, Bacilli IPR000090 Flagellar motor switch protein FliG IPR023087 Flagellar motor switch protein FliG, C-terminal IPR011002 Flagellar motor switch protein FliG, alpha-helical IPR032779 Flagellar motor switch protein FliG, middle domain IPR028263 Flagellar motor switch protein FliG, N-terminal domain IPR018490 Cyclic nucleotide-binding-like IPR014710 RmlC-like jelly roll fold IPR013556 Flagellar M-ring C-terminal IPR000067 Flagellar M-ring protein FliF IPR006182 Secretory protein YscJ/FliF IPR001624 Flagellar hook-basal body complex protein FliE IPR001444 Flagellar basal body rod protein, N-terminal IPR019776 Flagellar basal body rod protein, conserved site IPR010930 Flagellar basal-body/hook protein, C-terminal domain IPR006299 Flagellar basal-body rod protein FlgC IPR001444 Flagellar basal body rod protein, N-terminal IPR019776 Flagellar basal body rod protein, conserved site IPR006300 Flagellar basal-body rod protein FlgB IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY IPR029016 GAF-like domain superfamily IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR003593 AAA+ ATPase domain IPR003959 ATPase, AAA-type, core IPR019489 Clp ATPase, C-terminal IPR004491 Heat shock protein HslU IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR022281 ATP-dependent protease, HslV subunit IPR029055 Nucleophile aminohydrolases, N-terminal IPR001353 Proteasome, subunit alpha/beta IPR023333 Proteasome B-type subunit IPR011010 DNA breaking-rejoining enzyme, catalytic core IPR013762 Integrase-like, catalytic domain superfamily IPR002104 Integrase, catalytic domain IPR010998 Integrase/recombinase, N-terminal IPR004107 Integrase, SAM-like, N-terminal IPR011931 Tyrosine recombinase XerC IPR011932 Tyrosine recombinase XerD IPR023009 Tyrosine recombinase XerC/XerD IPR036188 FAD/NAD(P)-binding domain superfamily IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related IPR020595 MnmG-related, conserved site IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO IPR000380 DNA topoisomerase, type IA IPR003601 DNA topoisomerase, type IA, domain 2 IPR023406 DNA topoisomerase, type IA, active site IPR013497 DNA topoisomerase, type IA, central IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 IPR023405 DNA topoisomerase, type IA, core domain IPR003602 DNA topoisomerase, type IA, DNA-binding domain IPR013498 DNA topoisomerase, type IA, zn finger IPR005733 DNA topoisomerase I, bacterial-type IPR028612 DNA topoisomerase I, type IA IPR006171 TOPRIM domain IPR034149 DNA topoisomerase 1, TOPRIM domain IPR025576 YwiC-like protein IPR003488 DNA recombination-mediator protein A IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site IPR003781 CoA-binding IPR005810 Succinyl-CoA ligase, alpha subunit IPR005811 ATP-citrate lyase/succinyl-CoA ligase IPR036291 NAD(P)-binding domain superfamily IPR016102 Succinyl-CoA synthetase-like IPR011761 ATP-grasp fold IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type IPR013815 ATP-grasp fold, subdomain 1 IPR005811 ATP-citrate lyase/succinyl-CoA ligase IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site IPR005809 Succinate--CoA synthetase, beta subunit IPR016102 Succinyl-CoA synthetase-like IPR022898 Ribonuclease HII IPR001352 Ribonuclease HII/HIII IPR024567 Ribonuclease HII/HIII domain IPR012337 Ribonuclease H-like superfamily IPR036397 Ribonuclease H superfamily IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain IPR023179 GTP-binding protein, orthogonal bundle domain superfamily IPR019991 GTP-binding protein, ribosome biogenesis IPR006073 GTP binding domain IPR016478 GTPase, MTG1 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR018490 Cyclic nucleotide-binding-like IPR000595 Cyclic nucleotide-binding domain IPR012318 Crp-type HTH domain IPR014710 RmlC-like jelly roll fold IPR018335 Transcription regulator HTH, Crp-type, conserved site IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR038657 Ribosomal protein L19 superfamily IPR001857 Ribosomal protein L19 IPR018257 Ribosomal protein L19, conserved site IPR008991 Translation protein SH3-like domain superfamily IPR029028 Alpha/beta knot methyltransferases IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IPR016009 tRNA methyltransferase TRMD/TRM10-type domain IPR011961 16S rRNA processing protein RimM IPR027275 PRC-barrel domain IPR011033 PRC-barrel-like superfamily IPR002676 RimM, N-terminal IPR036976 RimM, N-terminal domain superfamily IPR009000 Translation protein, beta-barrel domain superfamily IPR015946 K homology domain-like, alpha/beta IPR009019 K homology domain superfamily, prokaryotic type IPR020627 Uncharacterised protein family UPF0109 IPR000307 Ribosomal protein S16 IPR023803 Ribosomal protein S16 domain superfamily IPR003593 AAA+ ATPase domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily IPR013822 Signal recognition particle SRP54, helical bundle IPR004125 Signal recognition particle, SRP54 subunit, M-domain IPR004780 Signal recognition particle protein IPR022941 Signal recognition particle, SRP54 subunit IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily IPR013324 RNA polymerase sigma factor, region 3/4-like IPR007394 Putative helix-turn-helix protein, YlxM/p13-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR003593 AAA+ ATPase domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR013822 Signal recognition particle SRP54, helical bundle IPR004390 Signal-recognition particle receptor FtsY IPR036225 SRP/SRP receptor, N-terminal IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003395 RecF/RecN/SMC, N-terminal IPR024704 Structural maintenance of chromosomes protein IPR010935 SMCs flexible hinge IPR036277 SMCs flexible hinge superfamily IPR011890 Structural maintenance of chromosomes protein, prokaryotic IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR009507 Protein of unknown function UPF0435 IPR014720 Double-stranded RNA-binding domain IPR011907 Ribonuclease III IPR000999 Ribonuclease III domain IPR036389 Ribonuclease III, endonuclease domain superfamily IPR036736 ACP-like superfamily IPR003231 Acyl carrier protein (ACP) IPR020806 Polyketide synthase, phosphopantetheine-binding domain IPR009081 Phosphopantetheine binding ACP domain IPR006162 Phosphopantetheine attachment site IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase IPR036291 NAD(P)-binding domain superfamily IPR002347 Short-chain dehydrogenase/reductase SDR IPR001227 Acyl transferase domain superfamily IPR014043 Acyl transferase IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IPR024925 Malonyl CoA-acyl carrier protein transacylase IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type IPR016036 Malonyl-CoA ACP transacylase, ACP-binding IPR003664 Fatty acid synthesis PlsX protein IPR012281 Phospholipid biosynthesis protein, PlsX-like IPR029069 HotDog domain superfamily IPR006683 Thioesterase domain IPR017275 Transcription factor FapR IPR036388 Winged helix-like DNA-binding domain superfamily IPR004609 ATP-dependent DNA helicase RecG IPR011545 DEAD/DEAH box helicase domain IPR014001 Helicase superfamily 1/2, ATP-binding domain IPR001650 Helicase, C-terminal IPR012340 Nucleic acid-binding, OB-fold IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR033454 RecG, wedge domain IPR005130 Serine dehydratase-like, alpha subunit IPR004642 Serine dehydratase, alpha subunit IPR002912 ACT domain IPR029009 Allosteric substrate binding domain superfamily IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit IPR005131 Serine dehydratase beta chain IPR019986 DAK2 domain-containing protein YloV IPR004007 DhaL domain IPR036117 DhaL domain superfamily IPR033470 Uncharacterised protein, DhaK domain IPR005531 Alkaline shock protein Asp23 IPR034704 L28p-like IPR026569 Ribosomal protein L28/L24 IPR037147 Ribosomal protein L28/L24 superfamily IPR001383 Ribosomal protein L28 IPR012609 Sporulation stage V, protein M IPR013785 Aldolase-type TIM barrel IPR026019 Ribulose-phosphate 3-epimerase IPR000056 Ribulose-phosphate 3-epimerase-like IPR011060 Ribulose-phosphate binding barrel IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain IPR012340 Nucleic acid-binding, OB-fold IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR004881 Ribosome biogenesis GTPase RsgA IPR010914 RsgA GTPase domain IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal IPR011009 Protein kinase-like domain superfamily IPR005543 PASTA domain IPR000719 Protein kinase domain IPR017441 Protein kinase, ATP binding site IPR008271 Serine/threonine-protein kinase, active site IPR015655 Protein phosphatase 2C family IPR036457 PPM-type phosphatase domain superfamily IPR001932 PPM-type phosphatase domain IPR013785 Aldolase-type TIM barrel IPR040072 Methyltransferase (Class A) IPR027492 Dual-specificity RNA methyltransferase RlmN IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr IPR007197 Radical SAM IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type IPR035926 NusB-like superfamily IPR006027 NusB/RsmB/TIM44 IPR023267 RNA (C5-cytosine) methyltransferase IPR004573 rRNA small subunit methyltransferase B IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR005794 Methionyl-tRNA formyltransferase IPR005793 Formyl transferase, C-terminal IPR037022 Formyl transferase, C-terminal domain superfamily IPR002376 Formyl transferase, N-terminal IPR036477 Formyl transferase, N-terminal domain superfamily IPR011034 Formyl transferase-like, C-terminal domain superfamily IPR001555 Phosphoribosylglycinamide formyltransferase, active site IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain IPR006935 Helicase/UvrB, N-terminal IPR014001 Helicase superfamily 1/2, ATP-binding domain IPR001650 Helicase, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005259 Primosomal protein N' IPR041222 Primosomal protein N', 3' DNA-binding domain IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily IPR041236 Primosomal protein N, C-terminal domain IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain IPR035929 CoaB-like superfamily IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal IPR036551 Flavin prenyltransferase-like IPR003382 Flavoprotein IPR003716 DNA-directed RNA polymerase, omega subunit IPR006110 RNA polymerase, subunit omega/K/RPB6 IPR012293 RNA polymerase subunit, RPB6/omega IPR036161 RPB6/omega subunit-like superfamily IPR008145 Guanylate kinase/L-type calcium channel beta subunit IPR008144 Guanylate kinase-like domain IPR017665 Guanylate kinase IPR020590 Guanylate kinase, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR007169 Extracellular matrix regulatory protein A IPR005229 Conserved hypothetical protein CHP00255 IPR013551 Domain of unknown function DUF1732 IPR013527 YicC-like, N-terminal IPR006068 Cation-transporting P-type ATPase, C-terminal IPR004014 Cation-transporting P-type ATPase, N-terminal IPR023299 P-type ATPase, cytoplasmic domain N IPR018303 P-type ATPase, phosphorylation site IPR023298 P-type ATPase, transmembrane domain superfamily IPR008250 P-type ATPase, A domain superfamily IPR036412 HAD-like superfamily IPR023214 HAD superfamily IPR005782 P-type ATPase, subfamily IIA, SERCA-type IPR001757 P-type ATPase IPR008532 NFACT, RNA-binding domain IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) IPR006195 Aminoacyl-tRNA synthetase, class II IPR002317 Serine-tRNA ligase, type1 IPR015866 Serine-tRNA synthetase, type1, N-terminal IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily IPR033729 Serine-tRNA ligase catalytic core domain IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm IPR001584 Integrase, catalytic core IPR025246 Transposase IS30-like HTH domain IPR012337 Ribonuclease H-like superfamily IPR036397 Ribonuclease H superfamily IPR001598 Transposase, IS30, conserved site IPR001584 Integrase, catalytic core IPR025246 Transposase IS30-like HTH domain IPR012337 Ribonuclease H-like superfamily IPR036397 Ribonuclease H superfamily IPR001598 Transposase, IS30, conserved site IPR001584 Integrase, catalytic core IPR025246 Transposase IS30-like HTH domain IPR012337 Ribonuclease H-like superfamily IPR036397 Ribonuclease H superfamily IPR001598 Transposase, IS30, conserved site IPR013785 Aldolase-type TIM barrel IPR006638 Elp3/MiaB/NifB IPR013483 Molybdenum cofactor biosynthesis protein A IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site IPR010505 Molybdenum cofactor synthesis C-terminal IPR007197 Radical SAM IPR016193 Cytidine deaminase-like IPR003786 Sulfur carrier protein FdhD IPR006584 Cellulose binding, type IV IPR005084 Carbohydrate binding module family 6 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily IPR008979 Galactose-binding-like domain superfamily IPR013319 Glycoside hydrolase family 11/12 IPR018208 Glycoside hydrolase family 11, active site 1 IPR033119 Glycoside hydrolase family 11, active site 2 IPR033123 Glycosyl hydrolases family 11 (GH11) domain IPR001137 Glycoside hydrolase family 11 IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR018745 Domain of unknown function DUF2294 IPR009010 Aspartate decarboxylase-like domain superfamily IPR006443 Formate dehydrogenase-N, alpha subunit IPR006657 Molybdopterin dinucleotide-binding domain IPR006656 Molybdopterin oxidoreductase IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site IPR006311 Twin-arginine translocation pathway, signal sequence IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR004033 UbiE/COQ5 methyltransferase IPR023576 UbiE/COQ5 methyltransferase, conserved site IPR023031 Orotate phosphoribosyltransferase IPR004467 Orotate phosphoribosyl transferase domain IPR000836 Phosphoribosyltransferase domain IPR029057 Phosphoribosyltransferase-like IPR013785 Aldolase-type TIM barrel IPR014732 Orotidine 5'-phosphate decarboxylase IPR018089 Orotidine 5'-phosphate decarboxylase, active site IPR001754 Orotidine 5'-phosphate decarboxylase domain IPR011060 Ribulose-phosphate binding barrel IPR013785 Aldolase-type TIM barrel IPR033888 Dihydroorotate dehydrogenase, class 1B IPR005720 Dihydroorotate dehydrogenase domain IPR024920 Dihydroorotate dehydrogenase, class 1 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 IPR001295 Dihydroorotate dehydrogenase, conserved site IPR012165 Cytochrome-c3 hydrogenase, gamma subunit IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain IPR023455 Dihydroorotate dehydrogenase electron transfer subunit IPR017927 FAD-binding domain, ferredoxin reductase-type IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IPR001433 Oxidoreductase FAD/NAD(P)-binding IPR017938 Riboflavin synthase-like beta-barrel IPR011761 ATP-grasp fold IPR006275 Carbamoyl-phosphate synthase, large subunit IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain IPR011607 Methylglyoxal synthase-like domain IPR036914 Methylglyoxal synthase-like domain superfamily IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain IPR016185 Pre-ATP-grasp domain superfamily IPR006274 Carbamoyl-phosphate synthase, small subunit IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily IPR029062 Class I glutamine amidotransferase-like IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain IPR017926 Glutamine amidotransferase IPR006680 Amidohydrolase-related IPR004722 Dihydroorotase IPR002195 Dihydroorotase, conserved site IPR011059 Metal-dependent hydrolase, composite domain superfamily IPR032466 Metal-dependent hydrolase IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding IPR006130 Aspartate/ornithine carbamoyltransferase IPR036901 Aspartate/ornithine carbamoyltransferase superfamily IPR002082 Aspartate carbamoyltransferase IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain IPR029935 Uracil permease IPR006042 Xanthine/uracil permease IPR006043 Xanthine/uracil/vitamin C permease IPR000836 Phosphoribosyltransferase domain IPR029057 Phosphoribosyltransferase-like IPR023050 Bifunctional protein PyrR IPR020103 Pseudouridine synthase, catalytic domain superfamily IPR006225 Pseudouridine synthase, RluC/RluD IPR006224 Pseudouridine synthase, RluC/RluD, conserved site IPR006145 Pseudouridine synthase, RsuA/RluA IPR002942 RNA-binding S4 domain IPR036986 RNA-binding S4 domain superfamily IPR001872 Peptidase A8, signal peptidase II IPR037187 DksA, N-terminal domain superfamily IPR014240 Regulatory protein, YteA family IPR000962 Zinc finger, DksA/TraR C4-type IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPR002300 Aminoacyl-tRNA synthetase, class Ia IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain IPR002301 Isoleucine-tRNA ligase IPR023585 Isoleucine-tRNA ligase, type 1 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain IPR010663 Zinc finger, FPG/IleRS-type IPR019933 DivIVA domain IPR007793 DivIVA family IPR012677 Nucleotide-binding alpha-beta plait domain superfamily IPR002942 RNA-binding S4 domain IPR036986 RNA-binding S4 domain superfamily IPR040591 YlmH, putative RNA-binding domain IPR003425 CCB3/YggT IPR023052 Cell division protein SepF IPR007561 Cell division protein SepF/SepF-related IPR038594 SepF-like superfamily IPR001608 Alanine racemase, N-terminal IPR029066 PLP-binding barrel IPR011078 Pyridoxal phosphate homeostasis protein IPR003730 Multi-copper polyphenol oxidoreductase IPR038371 Multi-copper polyphenol oxidoreductase superfamily IPR011324 Cytotoxic necrotizing factor-like, catalytic IPR027275 PRC-barrel domain IPR011033 PRC-barrel-like superfamily IPR014238 Sporulation protein YlmC/YmxH IPR022493 Integral membrane YkoY IPR005496 Integral membrane protein TerC IPR036259 MFS transporter superfamily IPR014284 RNA polymerase sigma-70 like domain IPR014322 RNA polymerase sigma-B/F/G type IPR014212 RNA polymerase sigma-G type IPR000943 RNA polymerase sigma-70 IPR007627 RNA polymerase sigma-70 region 2 IPR007624 RNA polymerase sigma-70 region 3 IPR007630 RNA polymerase sigma-70 region 4 IPR013325 RNA polymerase sigma factor, region 2 IPR013324 RNA polymerase sigma factor, region 3/4-like IPR014284 RNA polymerase sigma-70 like domain IPR014200 RNA polymerase sigma-E type IPR000943 RNA polymerase sigma-70 IPR007627 RNA polymerase sigma-70 region 2 IPR007630 RNA polymerase sigma-70 region 4 IPR013325 RNA polymerase sigma factor, region 2 IPR013324 RNA polymerase sigma factor, region 3/4-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR005081 Sigma-E processing peptidase SpoIIGA IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD IPR000158 Cell division protein FtsZ IPR020805 Cell division protein FtsZ, conserved site IPR024757 Cell division protein FtsZ, C-terminal IPR008280 Tubulin/FtsZ, C-terminal IPR018316 Tubulin/FtsZ, 2-layer sandwich domain IPR037103 Tubulin/FtsZ, C-terminal domain superfamily IPR036525 Tubulin/FtsZ, GTPase domain superfamily IPR003008 Tubulin/FtsZ, GTPase domain IPR020823 Cell division protein FtsA IPR003494 SHS2 domain inserted in FtsA IPR020823 Cell division protein FtsA IPR003494 SHS2 domain inserted in FtsA IPR009709 Protein of unknown function DUF1290 IPR010273 Protein of unknown function DUF881 IPR010273 Protein of unknown function DUF881 IPR026580 Cell division protein DivIB IPR034746 POTRA domain IPR013685 POTRA domain, FtsQ-type IPR016166 FAD-binding domain, PCMH-type IPR036318 FAD-binding, type PCMH-like superfamily IPR016167 FAD-binding, type PCMH, subdomain 1 IPR016169 FAD-binding, type PCMH, subdomain 2 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily IPR006094 FAD linked oxidase, N-terminal IPR006009 N-acetylglucosaminyltransferase, MurG IPR007235 Glycosyl transferase, family 28, C-terminal IPR004276 Glycosyltransferase family 28, N-terminal domain IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site IPR013437 Probable peptidoglycan glycosyltransferase FtsW IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA IPR013438 Sporulation stage V, protein E IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site IPR013437 Probable peptidoglycan glycosyltransferase FtsW IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA IPR013438 Sporulation stage V, protein E IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site IPR013437 Probable peptidoglycan glycosyltransferase FtsW IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA IPR013438 Sporulation stage V, protein E IPR036565 Mur-like, catalytic domain superfamily IPR004101 Mur ligase, C-terminal IPR036615 Mur ligase, C-terminal domain superfamily IPR013221 Mur ligase, central IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase IPR019591 Mrp/NBP35 ATP-binding protein IPR000808 Mrp, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 IPR000715 Glycosyl transferase, family 4 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site IPR000715 Glycosyl transferase, family 4 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site IPR036565 Mur-like, catalytic domain superfamily IPR004101 Mur ligase, C-terminal IPR036615 Mur ligase, C-terminal domain superfamily IPR013221 Mur ligase, central IPR000713 Mur ligase, N-terminal catalytic domain IPR035911 MurE/MurF, N-terminal IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase IPR018109 Folylpolyglutamate synthetase, conserved site IPR036565 Mur-like, catalytic domain superfamily IPR004101 Mur ligase, C-terminal IPR036615 Mur ligase, C-terminal domain superfamily IPR013221 Mur ligase, central IPR000713 Mur ligase, N-terminal catalytic domain IPR035911 MurE/MurF, N-terminal IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase IPR012338 Beta-lactamase/transpeptidase-like IPR005543 PASTA domain IPR005311 Penicillin-binding protein, dimerisation domain IPR036138 Penicillin-binding protein, dimerisation domain superfamily IPR001460 Penicillin-binding protein, transpeptidase IPR011927 Stage V sporulation protein D IPR012338 Beta-lactamase/transpeptidase-like IPR005543 PASTA domain IPR005311 Penicillin-binding protein, dimerisation domain IPR036138 Penicillin-binding protein, dimerisation domain superfamily IPR001460 Penicillin-binding protein, transpeptidase IPR011922 Cell division protein FtsL IPR007060 Septum formation initiator FtsL/DivIC IPR002903 Ribosomal RNA small subunit methyltransferase H IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR003444 Transcriptional regulator MraZ IPR035644 MraZ, C-terminal IPR020603 MraZ domain IPR035642 MraZ, N-terminal IPR038619 MraZ superfamily IPR007159 SpoVT-AbrB domain IPR037914 SpoVT-AbrB domain superfamily IPR011199 Bacillithiol biosynthesis BshC IPR041262 Spore germination GerD, central core domain IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPR013328 6-phosphogluconate dehydrogenase, domain 2 IPR003710 Ketopantoate reductase ApbA/PanE IPR013752 Ketopantoate reductase, C-terminal domain IPR013332 Ketopantoate reductase, N-terminal domain IPR036291 NAD(P)-binding domain superfamily IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR017274 Putative N-acetyltransferase YlbP IPR014243 Transcription factor, RsfA IPR009057 Homeobox-like domain superfamily IPR017930 Myb domain IPR002677 Ribosomal protein L32p IPR011332 Zinc-binding ribosomal protein IPR003772 Large ribosomal RNA subunit accumulation protein YceD IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR008513 tRNA(Met) cytidine acetate ligase IPR039381 Endopeptidase La, PDZ domain IPR008269 Peptidase S16, Lon proteolytic domain IPR027065 Lon protease IPR001478 PDZ domain IPR036034 PDZ superfamily IPR020568 Ribosomal protein S5 domain 2-type fold IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPR039381 Endopeptidase La, PDZ domain IPR008269 Peptidase S16, Lon proteolytic domain IPR027065 Lon protease IPR001478 PDZ domain IPR036034 PDZ superfamily IPR020568 Ribosomal protein S5 domain 2-type fold IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IPR001423 Lysophospholipase patatin, conserved site IPR002641 Patatin-like phospholipase domain IPR024164 KinB-signalling pathway activation protein IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain IPR014226 Sporulation integral membrane protein YlbJ IPR004821 Cytidyltransferase-like domain IPR001980 Phosphopantetheine adenylyltransferase IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR004398 RNA methyltransferase, RsmD IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR023692 Multidrug resistance protein MdtG IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG IPR016979 Protein of unknown function DUF2129 IPR010368 Control of competence regulator ComK, YlbF/YmcA IPR023378 YheA/YmcA-like domain superfamily IPR004601 UV-endonuclease UvdE IPR023520 UV-endonuclease UvdE, bacterial IPR036237 Xylose isomerase-like superfamily IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel IPR002509 NodB homology domain IPR014132 Sporulation polysaccharide deacetylase, PdaB IPR025613 YlbE-like protein IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR029410 CAP-associated domain IPR014044 CAP domain IPR035940 CAP superfamily IPR000644 CBS domain IPR014967 Uncharacterised protein family, YugN-like IPR036491 YugN-like superfamily IPR002549 Transmembrane protein TqsA-like IPR014227 Putative transport protein YtvI-like IPR007352 Protein of unknown function DUF420 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes IPR024791 Cytochrome c oxidase subunit III IPR000298 Cytochrome c oxidase subunit III-like IPR035973 Cytochrome c oxidase subunit III-like superfamily IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle IPR033946 Ubiquinol oxidase subunit III domain IPR023616 Cytochrome c oxidase-like, subunit I domain IPR036927 Cytochrome c oxidase-like, subunit I superfamily IPR000883 Cytochrome c oxidase subunit I IPR023615 Cytochrome c oxidase, subunit I, copper-binding site IPR014241 Cytochrome c oxidase, subunit I bacterial type IPR002429 Cytochrome c oxidase subunit II-like C-terminal IPR001505 Copper centre Cu(A) IPR008972 Cupredoxin IPR034236 Caa3-type Cytochrome c oxidase subunit II, cupredoxin domain IPR009056 Cytochrome c-like domain IPR036909 Cytochrome c-like domain superfamily IPR014222 Cytochrome c oxidase, subunit II IPR011759 Cytochrome C oxidase subunit II, transmembrane domain IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily IPR006369 Protohaem IX farnesyltransferase IPR000537 UbiA prenyltransferase family IPR030470 UbiA prenyltransferase conserved site IPR003780 COX15/CtaA family IPR023755 Heme A synthase, type 1 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal IPR022770 Ferric iron reductase FhuF domain IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like IPR036188 FAD/NAD(P)-binding domain superfamily IPR031043 Putative histamine N-monooxygenase IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase IPR016181 Acyl-CoA N-acyltransferase IPR019432 Siderophore biosynthesis protein, conserved domain IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal IPR022770 Ferric iron reductase FhuF domain IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like IPR002129 Pyridoxal phosphate-dependent decarboxylase IPR015424 Pyridoxal phosphate-dependent transferase IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR021115 Pyridoxal-phosphate binding site IPR005814 Aminotransferase class-III IPR004637 2,4-diaminobutyrate 4-transaminase IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR013785 Aldolase-type TIM barrel IPR011761 ATP-grasp fold IPR005481 Biotin carboxylase-like, N-terminal domain IPR011764 Biotin carboxylation domain IPR005482 Biotin carboxylase, C-terminal IPR000089 Biotin/lipoyl attachment IPR003379 Carboxylase, conserved domain IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain IPR016185 Pre-ATP-grasp domain superfamily IPR000891 Pyruvate carboxyltransferase IPR005930 Pyruvate carboxylase IPR011054 Rudiment single hybrid motif IPR011053 Single hybrid motif IPR009983 Uncharacterised protein family UPF0358 IPR036270 UPF0358 superfamily IPR012338 Beta-lactamase/transpeptidase-like IPR015868 Glutaminase IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003714 PhoH-like protein IPR029060 PIN-like domain superfamily IPR002716 PIN domain IPR025620 YlaH-like protein IPR035651 BipA, domain V IPR041095 Elongation Factor G, domain II IPR035647 EF-G domain III/V-like IPR000640 Elongation factor EFG, domain V-like IPR004161 Translation elongation factor EFTu-like, domain 2 IPR031157 Tr-type G domain, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005225 Small GTP-binding protein domain IPR000795 Transcription factor, GTP-binding domain IPR009000 Translation protein, beta-barrel domain superfamily IPR042116 GTP-binding protein TypA/BipA, C-terminal IPR006298 GTP-binding protein TypA IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPR013328 6-phosphogluconate dehydrogenase, domain 2 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding IPR015815 3-hydroxyisobutyrate dehydrogenase-related IPR036291 NAD(P)-binding domain superfamily IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain IPR006398 2-hydroxy-3-oxopropionate reductase IPR020583 Inositol monophosphatase, metal-binding site IPR000760 Inositol monophosphatase-like IPR020550 Inositol monophosphatase, conserved site IPR009403 Protein of unknown function UPF0637 IPR023324 BH2638-like superfamily IPR007920 Protein of unknown function UPF0223 IPR000310 Orn/Lys/Arg decarboxylase, major domain IPR008286 Orn/Lys/Arg decarboxylase, C-terminal IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily IPR015424 Pyridoxal phosphate-dependent transferase IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR010343 Aromatic acid exporter family member 1 IPR000524 Transcription regulator HTH, GntR IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR000524 Transcription regulator HTH, GntR IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR029061 Thiamin diphosphate-binding fold IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II IPR005475 Transketolase-like, pyrimidine-binding domain IPR033248 Transketolase, C-terminal domain IPR001017 Dehydrogenase, E1 component IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha IPR029061 Thiamin diphosphate-binding fold IPR023635 Peptide deformylase IPR036821 Peptide deformylase superfamily IPR000150 Cof family IPR036412 HAD-like superfamily IPR006379 HAD-superfamily hydrolase, subfamily IIB IPR023214 HAD superfamily IPR000150 Cof family IPR036412 HAD-like superfamily IPR006379 HAD-superfamily hydrolase, subfamily IIB IPR023214 HAD superfamily IPR009907 Protein of unknown function DUF1447 IPR001279 Metallo-beta-lactamase IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain IPR004613 Ribonuclease J IPR042173 Ribonuclease J, domain 2 IPR030854 Ribonuclease J, bacteria IPR041636 Ribonuclease J, C-terminal IPR001587 Ribonuclease J, conserved site IPR036291 NAD(P)-binding domain superfamily IPR006037 Regulator of K+ conductance, C-terminal IPR036721 Regulator of K+ conductance, C-terminal domain superfamily IPR003148 Regulator of K+ conductance, N-terminal IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant IPR036249 Thioredoxin-like superfamily IPR013766 Thioredoxin domain IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant IPR024706 Peroxiredoxin, AhpC-type IPR019479 Peroxiredoxin, C-terminal IPR036249 Thioredoxin-like superfamily IPR013766 Thioredoxin domain IPR010920 LSM domain superfamily IPR006685 Mechanosensitive ion channel MscS IPR011066 Mechanosensitive ion channel MscS, C-terminal IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 IPR023408 Mechanosensitive ion channel MscS domain superfamily IPR005370 Uncharacterised protein family UPF0180 IPR023905 Acetyldiaminopimelate deacetylase IPR017439 Amidohydrolase IPR036264 Bacterial exopeptidase dimerisation domain IPR002933 Peptidase M20 IPR011650 Peptidase M20, dimerisation domain IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal IPR001451 Hexapeptide repeat IPR011004 Trimeric LpxA-like superfamily IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit IPR004681 TRAP transporter large membrane protein DctM IPR007387 TRAP transporter, small membrane protein DctQ IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit IPR004681 TRAP transporter large membrane protein DctM IPR007387 TRAP transporter, small membrane protein DctQ IPR004682 TRAP transporter solute receptor, DctP family IPR018389 TRAP transporter solute receptor DctP/TeaA IPR038404 TRAP transporter solute receptor DctP superfamily IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPR004849 6-phosphogluconate dehydrogenase, YqeC-type IPR013328 6-phosphogluconate dehydrogenase, domain 2 IPR006114 6-phosphogluconate dehydrogenase, C-terminal IPR006115 6-phosphogluconate dehydrogenase, NADP-binding IPR006184 6-phosphogluconate-binding site IPR036291 NAD(P)-binding domain superfamily IPR006183 6-phosphogluconate dehydrogenase IPR009057 Homeobox-like domain superfamily IPR000281 Helix-turn-helix protein RpiR IPR035472 RpiR-like, SIS domain IPR001347 Sugar isomerase (SIS) IPR036388 Winged helix-like DNA-binding domain superfamily IPR000577 Carbohydrate kinase, FGGY IPR018485 Carbohydrate kinase, FGGY, C-terminal IPR018483 Carbohydrate kinase, FGGY, conserved site IPR018484 Carbohydrate kinase, FGGY, N-terminal IPR006002 Gluconate kinase IPR039556 ICL/PEPM domain IPR006254 Isocitrate lyase IPR018523 Isocitrate lyase/phosphorylmutase, conserved site IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IPR040442 Pyruvate kinase-like domain superfamily IPR019715 Haemolysin XhlA IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase IPR036264 Bacterial exopeptidase dimerisation domain IPR002933 Peptidase M20 IPR011650 Peptidase M20, dimerisation domain IPR016084 Haem oxygenase-like, multi-helical IPR026285 TenA_E protein IPR004305 Thiaminase-2/PQQC IPR027574 Thiaminase II IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR027939 NMT1/THI5 family IPR015168 SsuA/THI5-like IPR010920 LSM domain superfamily IPR006685 Mechanosensitive ion channel MscS IPR011066 Mechanosensitive ion channel MscS, C-terminal IPR006686 Mechanosensitive ion channel MscS, conserved site IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 IPR023408 Mechanosensitive ion channel MscS domain superfamily IPR003593 AAA+ ATPase domain IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR001296 Glycosyl transferase, family 1 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain IPR003773 Menaquinone biosynthesis enzyme IPR030869 1,4-dihydroxy-6-naphtoate synthase IPR019963 Futalosine hydrolase IPR000845 Nucleoside phosphorylase domain IPR035994 Nucleoside phosphorylase superfamily IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR004839 Aminotransferase, class I/classII IPR015424 Pyridoxal phosphate-dependent transferase IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR000524 Transcription regulator HTH, GntR IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR004839 Aminotransferase, class I/classII IPR015424 Pyridoxal phosphate-dependent transferase IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR000524 Transcription regulator HTH, GntR IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR027022 ABC transporter permease protein, BceB-type IPR003838 ABC transporter permease protein domain IPR027022 ABC transporter permease protein, BceB-type IPR003838 ABC transporter permease protein domain IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR011006 CheY-like superfamily IPR001867 OmpR/PhoB-type DNA-binding domain IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR039420 Transcriptional regulatory protein WalR-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR011006 CheY-like superfamily IPR001867 OmpR/PhoB-type DNA-binding domain IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR039420 Transcriptional regulatory protein WalR-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR022919 Peptidase M48, protease HtpX, putative IPR001915 Peptidase M48 IPR004104 Oxidoreductase, C-terminal IPR036291 NAD(P)-binding domain superfamily IPR000683 Oxidoreductase, N-terminal IPR038377 Sodium/glucose symporter superfamily IPR011851 Sodium/proline symporter IPR001734 Sodium/solute symporter IPR018212 Sodium/solute symporter, conserved site IPR011009 Protein kinase-like domain superfamily IPR000719 Protein kinase domain IPR004147 UbiB domain IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain IPR005119 LysR, substrate-binding IPR000847 Transcription regulator HTH, LysR IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR001986 Enolpyruvate transferase domain IPR036968 Enolpyruvate transferase domain superfamily IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta IPR011006 CheY-like superfamily IPR001789 Signal transduction response regulator, receiver domain IPR013972 YcbB domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR012338 Beta-lactamase/transpeptidase-like IPR015868 Glutaminase IPR008334 5'-Nucleotidase, C-terminal IPR036907 5'-Nucleotidase, C-terminal domain superfamily IPR006146 5'-Nucleotidase, conserved site IPR006179 5'-Nucleotidase/apyrase IPR004843 Calcineurin-like phosphoesterase domain, ApaH type IPR041827 CpdB, N-terminal metallophosphatase domain IPR019931 LPXTG cell wall anchor domain IPR029052 Metallo-dependent phosphatase-like IPR001851 ABC transporter, permease IPR029058 Alpha/Beta hydrolase fold IPR000073 Alpha/beta hydrolase fold-1 IPR019913 Pyrimidine utilisation protein RutD IPR013096 Cupin 2, conserved barrel IPR014710 RmlC-like jelly roll fold IPR011051 RmlC-like cupin domain superfamily IPR004199 Beta galactosidase small chain/ domain 5 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily IPR011013 Galactose mutarotase-like domain superfamily IPR008979 Galactose-binding-like domain superfamily IPR014718 Glycoside hydrolase-type carbohydrate-binding IPR006101 Glycoside hydrolase, family 2 IPR023232 Glycoside hydrolase, family 2, active site IPR023933 Glycoside hydrolase, family 2, beta-galactosidase IPR006103 Glycoside hydrolase family 2, catalytic domain IPR023230 Glycoside hydrolase, family 2, conserved site IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich IPR006104 Glycosyl hydrolases family 2, sugar binding domain IPR017853 Glycoside hydrolase superfamily IPR013783 Immunoglobulin-like fold IPR032312 Beta-galactosidase, domain 4 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR006059 Bacterial extracellular solute-binding protein IPR039570 AmiC, periplasmic binding domain IPR000709 Leu/Ile/Val-binding protein IPR028082 Periplasmic binding protein-like I IPR041522 CdaR, GGDEF-like domain IPR008599 Putative sugar diacid recognition IPR025736 PucR C-terminal helix-turn-helix domain IPR042070 PucR C-terminal helix-turn-helix domain superfamily IPR012010 Urease, gamma subunit IPR002026 Urease, gamma/gamma-beta subunit IPR036463 Urease, gamma subunit superfamily IPR016161 Aldehyde/histidinol dehydrogenase IPR016163 Aldehyde dehydrogenase, C-terminal IPR016160 Aldehyde dehydrogenase, cysteine active site IPR029510 Aldehyde dehydrogenase, glutamic acid active site IPR016162 Aldehyde dehydrogenase, N-terminal IPR015590 Aldehyde dehydrogenase domain IPR005932 1-pyrroline-5-carboxylate dehydrogenase IPR029041 FAD-linked oxidoreductase-like IPR008219 Proline dehydrogenase, bacteria and archaea IPR002872 Proline dehydrogenase domain IPR015659 Proline oxidase family IPR036775 DNA polymerase, Y-family, little finger domain superfamily IPR017961 DNA polymerase, Y-family, little finger domain IPR022880 DNA polymerase IV IPR001126 UmuC domain IPR003844 Uncharacterised protein family UPF0060 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG IPR031100 LOG family IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG IPR031100 LOG family IPR002019 Urease, beta subunit IPR036461 Urease, beta subunit superfamily IPR000620 EamA domain IPR003680 Flavodoxin-like fold IPR029039 Flavoprotein-like superfamily IPR011701 Major facilitator superfamily IPR036259 MFS transporter superfamily IPR004682 TRAP transporter solute receptor, DctP family IPR018389 TRAP transporter solute receptor DctP/TeaA IPR038404 TRAP transporter solute receptor DctP superfamily IPR011006 CheY-like superfamily IPR024187 Signal transduction response regulator, citrate/malate metabolism IPR001789 Signal transduction response regulator, receiver domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR000014 PAS domain IPR035965 PAS domain superfamily IPR013767 PAS fold IPR033463 Single cache domain 3 IPR029151 Periplasmic sensor-like domain superfamily IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB IPR039506 SpoOB, alpha-helical domain IPR030678 Peptide/nickel binding protein, MppA-type IPR039424 Solute-binding protein family 5 IPR000914 Solute-binding protein family 5 domain IPR030678 Peptide/nickel binding protein, MppA-type IPR039424 Solute-binding protein family 5 IPR000914 Solute-binding protein family 5 domain IPR018052 Aldose 1-epimerase, conserved site IPR015443 Aldose 1-epimerase IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase IPR011013 Galactose mutarotase-like domain superfamily IPR014718 Glycoside hydrolase-type carbohydrate-binding IPR006680 Amidohydrolase-related IPR011059 Metal-dependent hydrolase, composite domain superfamily IPR032466 Metal-dependent hydrolase IPR011612 Urease alpha-subunit, N-terminal domain IPR017950 Urease active site IPR005848 Urease, alpha subunit IPR017951 Urease alpha subunit, C-terminal IPR029754 Urease nickel binding site IPR000577 Carbohydrate kinase, FGGY IPR018485 Carbohydrate kinase, FGGY, C-terminal IPR018483 Carbohydrate kinase, FGGY, conserved site IPR018484 Carbohydrate kinase, FGGY, N-terminal IPR006000 Xylulokinase IPR036237 Xylose isomerase-like superfamily IPR013022 Xylose isomerase-like, TIM barrel domain IPR013452 Xylose isomerase, bacterial-type IPR001998 Xylose isomerase IPR000600 ROK family IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR036249 Thioredoxin-like superfamily IPR009474 Putative bacilliredoxin, YphP/YqiW family IPR006129 Adhesin B IPR012674 Calycin IPR006128 Adhesion lipoprotein IPR015304 ZinT domain IPR006127 Periplasmic solute binding protein, ZnuA-like IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain IPR000089 Biotin/lipoyl attachment IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IPR036625 E3-binding domain superfamily IPR004167 Peripheral subunit-binding domain IPR011053 Single hybrid motif IPR029061 Thiamin diphosphate-binding fold IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II IPR005475 Transketolase-like, pyrimidine-binding domain IPR033248 Transketolase, C-terminal domain IPR001017 Dehydrogenase, E1 component IPR029061 Thiamin diphosphate-binding fold IPR036188 FAD/NAD(P)-binding domain superfamily IPR023753 FAD/NAD(P)-binding domain IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily IPR006258 Dihydrolipoamide dehydrogenase IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site IPR036188 FAD/NAD(P)-binding domain superfamily IPR023753 FAD/NAD(P)-binding domain IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily IPR006258 Dihydrolipoamide dehydrogenase IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase IPR033524 Leu/Phe/Val dehydrogenases active site IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal IPR036291 NAD(P)-binding domain superfamily IPR012406 Urease accessory protein UreE IPR007864 Urease accessory protein UreE, C-terminal domain IPR036675 UreE, C-terminal domain superfamily IPR004029 UreE urease accessory, N-terminal IPR036118 UreE urease accessory, N-terminal domain superfamily IPR003593 AAA+ ATPase domain IPR009057 Homeobox-like domain superfamily IPR002197 DNA binding HTH domain, Fis-type IPR036291 NAD(P)-binding domain superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR000014 PAS domain IPR035965 PAS domain superfamily IPR013767 PAS fold IPR002078 RNA polymerase sigma factor 54 interaction domain IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IPR025944 Sigma-54 interaction domain, conserved site IPR003593 AAA+ ATPase domain IPR009057 Homeobox-like domain superfamily IPR002197 DNA binding HTH domain, Fis-type IPR036291 NAD(P)-binding domain superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR000014 PAS domain IPR035965 PAS domain superfamily IPR013767 PAS fold IPR002078 RNA polymerase sigma factor 54 interaction domain IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IPR025944 Sigma-54 interaction domain, conserved site IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase IPR001173 Glycosyltransferase 2-like IPR029044 Nucleotide-diphospho-sugar transferases IPR011006 CheY-like superfamily IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR014879 Sporulation initiation factor Spo0A, C-terminal IPR012052 Sporulation transcription factor Spo0A IPR036388 Winged helix-like DNA-binding domain superfamily IPR001478 PDZ domain IPR041489 PDZ domain 6 IPR036034 PDZ superfamily IPR014219 Peptidase S55, sporulation stage IV, protein B IPR009003 Peptidase S1, PA clan IPR008763 Peptidase S55, SpoIVB IPR002639 Urease accessory protein UreF IPR038277 UreF domain superfamily IPR004604 DNA recombination/repair protein RecN IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003395 RecF/RecN/SMC, N-terminal IPR001669 Arginine repressor IPR020899 Arginine repressor, C-terminal IPR036251 Arginine repressor, C-terminal domain superfamily IPR020900 Arginine repressor, DNA-binding domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR004538 Haemolysin A /rRNA methyltransferase TlyA IPR002877 Ribosomal RNA methyltransferase FtsJ domain IPR002942 RNA-binding S4 domain IPR036986 RNA-binding S4 domain superfamily IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR005477 Deoxyxylulose-5-phosphate synthase IPR029061 Thiamin diphosphate-binding fold IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II IPR005475 Transketolase-like, pyrimidine-binding domain IPR020826 Transketolase binding site IPR033248 Transketolase, C-terminal domain IPR005474 Transketolase, N-terminal IPR008949 Isoprenoid synthase domain superfamily IPR000092 Polyprenyl synthetase IPR033749 Polyprenyl synthetase, conserved site IPR003761 Exonuclease VII, small subunit IPR037004 Exonuclease VII, small subunit superfamily IPR003753 Exonuclease VII, large subunit IPR020579 Exonuclease VII, large subunit, C-terminal IPR025824 OB-fold nucleic acid binding domain IPR036291 NAD(P)-binding domain superfamily IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IPR035926 NusB-like superfamily IPR011605 NusB antitermination factor IPR006027 NusB/RsmB/TIM44 IPR003495 CobW/HypB/UreG, nucleotide-binding domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR004400 Urease accessory protein UreG IPR005531 Alkaline shock protein Asp23 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase IPR011761 ATP-grasp fold IPR005481 Biotin carboxylase-like, N-terminal domain IPR011764 Biotin carboxylation domain IPR005482 Biotin carboxylase, C-terminal IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain IPR016185 Pre-ATP-grasp domain superfamily IPR011054 Rudiment single hybrid motif IPR001249 Acetyl-CoA biotin carboxyl carrier IPR001882 Biotin-binding site IPR000089 Biotin/lipoyl attachment IPR011053 Single hybrid motif IPR024232 Stage III sporulation protein AH-like IPR038503 Stage III sporulation protein AH-like superfamily IPR014195 Sporulation stage III, protein AG IPR014245 Sporulation stage III, protein AF IPR014194 Sporulation stage III, protein AE IPR025664 Stage III sporulation protein AC/AD family IPR014211 Stage III sporulation protein AD IPR009570 Stage III sporulation protein AC IPR025664 Stage III sporulation protein AC/AD family IPR002669 Urease accessory protein UreD IPR014198 Stage III sporulation protein AB IPR003593 AAA+ ATPase domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR014217 Sporulation stage III, protein AA IPR020390 Uncharacterised protein family YqhV IPR015365 Elongation factor P, C-terminal IPR012340 Nucleic acid-binding, OB-fold IPR014722 Ribosomal protein L2, domain 2 IPR020599 Translation elongation factor P/YeiP IPR013185 Translation elongation factor, KOW-like IPR001059 Translation elongation factor P/YeiP, central IPR013852 Translation elongation factor P/YeiP, conserved site IPR011768 Translation elongation factor P IPR008991 Translation protein SH3-like domain superfamily IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal IPR036005 Creatinase/aminopeptidase-like IPR000587 Creatinase, N-terminal IPR000994 Peptidase M24 IPR001714 Peptidase M24, methionine aminopeptidase IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site IPR001874 Dehydroquinase, class II IPR018509 Dehydroquinase, class II, conserved site IPR036441 Dehydroquinase, class II superfamily IPR024563 Uncharacterised protein family YqhR IPR010787 Protein of unknown function DUF1385 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IPR002641 Patatin-like phospholipase domain IPR001367 Iron dependent repressor, metal binding and dimerisation domain IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily IPR022687 DTXR-type HTH domain IPR022897 HTH-type transcription regulator MntR IPR022689 Iron dependent repressor IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR007197 Radical SAM IPR023897 Spore photoproduct lyase IPR034560 Spore photoproduct lyase, Bacilli type IPR005144 ATP-cone domain IPR000788 Ribonucleotide reductase large subunit, C-terminal IPR013509 Ribonucleotide reductase large subunit, N-terminal IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent IPR008926 Ribonucleotide reductase R1 subunit, N-terminal IPR001544 Aminotransferase class IV IPR018300 Aminotransferase, class IV, conserved site IPR036038 Aminotransferase-like, PLP-dependent enzymes IPR005784 D-amino acid aminotransferase IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain IPR024898 Octanoyltransferase LipM IPR001763 Rhodanese-like domain IPR036873 Rhodanese-like domain superfamily IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 IPR020581 Glycine cleavage system P protein IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 IPR020581 Glycine cleavage system P protein IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR006223 Glycine cleavage system T protein IPR022903 Glycine cleavage system T protein, bacteria IPR028896 Aminomethyltransferase-like IPR013977 Glycine cleavage T-protein, C-terminal barrel domain IPR006222 Aminomethyltransferase, folate-binding domain IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 IPR024562 Uncharacterised protein family YqhG IPR001279 Metallo-beta-lactamase IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPR020254 Protein of unknown function DUF2626 IPR000983 Bacterial general secretion pathway protein G-type pilin IPR016940 ComG operon protein C IPR012902 Prokaryotic N-terminal methylation site IPR002696 Putative membrane protein insertion efficiency factor IPR000889 Glutathione peroxidase IPR029759 Glutathione peroxidase active site IPR029760 Glutathione peroxidase conserved site IPR036249 Thioredoxin-like superfamily IPR003004 GspF/PilC family IPR001992 Type II secretion system conserved site IPR018076 Type II secretion system F domain IPR042094 Type II secretion system F domain superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR001482 Type II/IV secretion system protein IPR013986 DExx box DNA helicase domain superfamily IPR014017 UvrD-like DNA helicase, C-terminal IPR000212 DNA helicase, UvrD/REP type IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR014016 UvrD-like helicase, ATP-binding domain IPR034739 UvrD/AddA helicase, N-terminal IPR003607 HD/PDEase domain IPR006674 HD domain IPR010773 Mycobacterium phage PG1, Gp7 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) IPR036291 NAD(P)-binding domain superfamily IPR002347 Short-chain dehydrogenase/reductase SDR IPR006153 Cation/H+ exchanger IPR038770 Sodium/solute symporter superfamily IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR006016 UspA IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE IPR004843 Calcineurin-like phosphoesterase domain, ApaH type IPR029052 Metallo-dependent phosphatase-like IPR041780 PrpE-like, metallophosphatase domain IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase IPR020103 Pseudouridine synthase, catalytic domain superfamily IPR006225 Pseudouridine synthase, RluC/RluD IPR006224 Pseudouridine synthase, RluC/RluD, conserved site IPR006145 Pseudouridine synthase, RsuA/RluA IPR002942 RNA-binding S4 domain IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal IPR017437 ATP-NAD kinase, PpnK-type, C-terminal IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily IPR002504 NAD kinase IPR007685 RelA/SpoT IPR020908 Uncharacterised protein family UPF0738 IPR023346 Lysozyme-like domain superfamily IPR000189 Prokaryotic transglycosylase, active site IPR008258 Transglycosylase SLT domain 1 IPR009010 Aspartate decarboxylase-like domain superfamily IPR006657 Molybdopterin dinucleotide-binding domain IPR006656 Molybdopterin oxidoreductase IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site IPR037920 Probable oxidoreductase YoaE, C-terminal IPR009050 Globin-like superfamily IPR012292 Globin/Protoglobin IPR019795 Globin, bacterial-like, conserved site IPR001486 Truncated hemoglobin IPR036249 Thioredoxin-like superfamily IPR013647 Oligopeptidase F, N-terminal domain IPR042088 Oligoendopeptidase F, C-terminal domain IPR001567 Peptidase M3A/M3B catalytic domain IPR004438 Peptidase M3B, oligoendopeptidase F IPR010330 Competence-induced protein CoiA-like IPR021176 Competence-induced protein CoiA IPR030874 Cardiolipin synthase, Firmicutes-type IPR022924 Cardiolipin synthase IPR027379 Cardiolipin synthase N-terminal IPR025202 Phospholipase D-like domain IPR001736 Phospholipase D/Transphosphatidylase IPR038471 MecA, C-terminal domain superfamily IPR008681 Negative regulator of genetic competence, MecA IPR005496 Integral membrane protein TerC IPR022301 Integral membrane protein YjbE IPR006660 Arsenate reductase-like IPR023731 Regulatory protein Spx IPR036249 Thioredoxin-like superfamily IPR006504 Transcriptional regulator Spx/MgsR IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR004254 AdipoR/Haemolysin-III-related IPR005744 Hly-III IPR003607 HD/PDEase domain IPR006674 HD domain IPR006675 HDIG domain IPR004481 Sodium/potassium/calcium exchanger IPR004837 Sodium/calcium exchanger membrane region IPR004481 Sodium/potassium/calcium exchanger IPR004837 Sodium/calcium exchanger membrane region IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPR002305 Aminoacyl-tRNA synthetase, class Ic IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR002306 Tryptophan-tRNA ligase IPR024109 Tryptophan-tRNA ligase, bacterial-type IPR020909 UPF0736 IPR018728 Domain of unknown function DUF2268 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR004566 Pantothenate kinase IPR006083 Phosphoribulokinase/uridine kinase IPR011105 Cell wall hydrolase, SleB IPR042047 Cell wall hydrolase SleB, domain 1 IPR002646 Poly A polymerase, head domain IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 IPR016039 Thiolase-like IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC IPR013216 Methyltransferase type 11 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR024558 ComZ IPR016040 NAD(P)-binding domain IPR036291 NAD(P)-binding domain superfamily IPR005886 UDP-glucose 4-epimerase IPR029058 Alpha/Beta hydrolase fold IPR025549 YjzC-like protein IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding IPR006130 Aspartate/ornithine carbamoyltransferase IPR036901 Aspartate/ornithine carbamoyltransferase superfamily IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain IPR002292 Ornithine/putrescine carbamoyltransferase IPR024904 Ornithine carbamoyltransferase IPR011761 ATP-grasp fold IPR013815 ATP-grasp fold, subdomain 1 IPR006275 Carbamoyl-phosphate synthase, large subunit IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain IPR011607 Methylglyoxal synthase-like domain IPR016185 Pre-ATP-grasp domain superfamily IPR006274 Carbamoyl-phosphate synthase, small subunit IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily IPR029062 Class I glutamine amidotransferase-like IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain IPR017926 Glutamine amidotransferase IPR004636 Acetylornithine/Succinylornithine transaminase family IPR005814 Aminotransferase class-III IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR036393 Acetylglutamate kinase-like superfamily IPR004662 Acetylglutamate kinase family IPR037528 Acetylglutamate kinase ArgB IPR001048 Aspartate/glutamate/uridylate kinase IPR002813 Arginine biosynthesis protein ArgJ IPR016117 ArgJ-like domain superfamily IPR042195 ArgJ beta chain, C-terminal domain IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 IPR036291 NAD(P)-binding domain superfamily IPR000534 Semialdehyde dehydrogenase, NAD-binding IPR012280 Semialdehyde dehydrogenase, dimerisation domain IPR006047 Glycosyl hydrolase, family 13, catalytic domain IPR013780 Glycosyl hydrolase, all-beta IPR017853 Glycoside hydrolase superfamily IPR032091 Maltogenic Amylase, C-terminal IPR003782 Copper chaperone SCO1/SenC IPR036249 Thioredoxin-like superfamily IPR013766 Thioredoxin domain IPR003782 Copper chaperone SCO1/SenC IPR036249 Thioredoxin-like superfamily IPR013766 Thioredoxin domain IPR014108 Cytochrome c oxidase caa3 type assembly factor CtaG IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related IPR001238 DNA-binding, RecF IPR018078 DNA-binding, RecF, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003395 RecF/RecN/SMC, N-terminal IPR042174 DNA-binding RecF, domain 2 IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR018540 Aspartyl-phosphate phosphatase Spo0E-like IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily IPR000150 Cof family IPR036412 HAD-like superfamily IPR006379 HAD-superfamily hydrolase, subfamily IIB IPR023214 HAD superfamily IPR001387 Cro/C1-type helix-turn-helix domain IPR013096 Cupin 2, conserved barrel IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR014710 RmlC-like jelly roll fold IPR011051 RmlC-like cupin domain superfamily IPR004471 Branched-chain amino acid transport, AzlC IPR011606 Branched-chain amino acid transport, permease IPR014001 Helicase superfamily 1/2, ATP-binding domain IPR001650 Helicase, C-terminal IPR022138 Helicase SWF/SNF-related IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR038718 SNF2-like, N-terminal domain superfamily IPR000330 SNF2-related, N-terminal domain IPR039425 RNA polymerase sigma-70 like IPR014284 RNA polymerase sigma-70 like domain IPR014294 RNA polymerase sigma-W, bacillaceae IPR000838 RNA polymerase sigma factor 70, ECF, conserved site IPR007627 RNA polymerase sigma-70 region 2 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 IPR013325 RNA polymerase sigma factor, region 2 IPR013324 RNA polymerase sigma factor, region 3/4-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR019264 Domain of unknown function DUF2179 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal IPR003740 Uncharacterised membrane protein YitT IPR029058 Alpha/Beta hydrolase fold IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain IPR001763 Rhodanese-like domain IPR036873 Rhodanese-like domain superfamily IPR002549 Transmembrane protein TqsA-like IPR000843 LacI-type HTH domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR028082 Periplasmic binding protein-like I IPR023588 Transcription regulator HTH, PurR IPR027383 Putative zinc-finger IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein IPR006059 Bacterial extracellular solute-binding protein IPR006061 Solute-binding family 1, conserved site IPR006047 Glycosyl hydrolase, family 13, catalytic domain IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain IPR013780 Glycosyl hydrolase, all-beta IPR017853 Glycoside hydrolase superfamily IPR013783 Immunoglobulin-like fold IPR032091 Maltogenic Amylase, C-terminal IPR024671 Autophagy-related protein 22-like IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR004778 Homoserine/Threonine efflux protein IPR001123 Amino acid exporter protein, LeuE-type IPR002318 Alanine-tRNA ligase, class IIc IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily IPR018165 Alanyl-tRNA synthetase, class IIc, core domain IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal IPR023033 Alanine-tRNA ligase, eukaryota/bacteria IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily IPR009000 Translation protein, beta-barrel domain superfamily IPR012947 Threonyl/alanyl tRNA synthetase, SAD IPR014046 Diadenylate cyclase IPR034701 Diadenylate cyclase CdaA IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily IPR003390 DNA integrity scanning protein, DisA, N-terminal IPR002528 Multi antimicrobial extrusion protein IPR011852 TRAP transporter solute receptor, TAXI family IPR011852 TRAP transporter solute receptor, TAXI family IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase IPR005814 Aminotransferase class-III IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR013785 Aldolase-type TIM barrel IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase IPR007197 Radical SAM IPR003593 AAA+ ATPase domain IPR011006 CheY-like superfamily IPR009057 Homeobox-like domain superfamily IPR002197 DNA binding HTH domain, Fis-type IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR001789 Signal transduction response regulator, receiver domain IPR002078 RNA polymerase sigma factor 54 interaction domain IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IPR025944 Sigma-54 interaction domain, conserved site IPR003593 AAA+ ATPase domain IPR011006 CheY-like superfamily IPR009057 Homeobox-like domain superfamily IPR002197 DNA binding HTH domain, Fis-type IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR001789 Signal transduction response regulator, receiver domain IPR002078 RNA polymerase sigma factor 54 interaction domain IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IPR025944 Sigma-54 interaction domain, conserved site IPR016446 Flavin oxidoreductase Frp family IPR029479 Nitroreductase IPR000415 Nitroreductase-like IPR003593 AAA+ ATPase domain IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR006159 Methylmalonyl-CoA mutase, C-terminal IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic IPR006158 Cobalamin (vitamin B12)-binding domain IPR036724 Cobalamin-binding domain superfamily IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III IPR005843 Alpha-D-phosphohexomutase, C-terminal IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily IPR016066 Alpha-D-phosphohexomutase, conserved site IPR005841 Alpha-D-phosphohexomutase superfamily IPR006352 Phosphoglucosamine mutase, bacterial type IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic IPR036724 Cobalamin-binding domain superfamily IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic IPR004608 Methylmalonyl-CoA mutase, beta chain IPR034733 Acetyl-CoA carboxylase IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit IPR029045 ClpP/crotonase-like domain superfamily IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal IPR009057 Homeobox-like domain superfamily IPR001647 DNA-binding HTH domain, TetR-type IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IPR013570 Transcription regulator YsiA, C-terminal IPR009057 Homeobox-like domain superfamily IPR001647 DNA-binding HTH domain, TetR-type IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IPR013570 Transcription regulator YsiA, C-terminal IPR019264 Domain of unknown function DUF2179 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal IPR003740 Uncharacterised membrane protein YitT IPR017932 Glutamine amidotransferase type 2 domain IPR035466 GlmS/AgaS, SIS domain 1 IPR035490 GlmS/FrlB, SIS domain 2 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising IPR029055 Nucleophile aminohydrolases, N-terminal IPR001347 Sugar isomerase (SIS) IPR039315 Chemotaxis protein CheW IPR036061 CheW-like domain superfamily IPR002545 CheW-like domain IPR004105 Histidine kinase CheA-like, homodimeric domain IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily IPR010808 Chemotaxis protein CheA, P2 response regulator-binding IPR036061 CheW-like domain superfamily IPR002545 CheW-like domain IPR035891 CheY-binding domain of CheA IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR036641 HPT domain superfamily IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain IPR001633 EAL domain IPR035919 EAL domain superfamily IPR000160 GGDEF domain IPR005330 MHYT domain IPR029787 Nucleotide cyclase IPR035965 PAS domain superfamily IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR012693 ABC transporter, phosphonate import, PhnC IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR005769 ABC transporter, permease PhnE/PtxC IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR005769 ABC transporter, permease PhnE/PtxC IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR005769 ABC transporter, permease PhnE/PtxC IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR005769 ABC transporter, permease PhnE/PtxC IPR014152 DNA helicase subunit AddA IPR014017 UvrD-like DNA helicase, C-terminal IPR000212 DNA helicase, UvrD/REP type IPR011604 Exonuclease, phage-type/RecB, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type IPR011335 Restriction endonuclease type II-like IPR014016 UvrD-like helicase, ATP-binding domain IPR034739 UvrD/AddA helicase, N-terminal IPR014140 DNA helicase subunit AddB IPR014017 UvrD-like DNA helicase, C-terminal IPR000212 DNA helicase, UvrD/REP type IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type IPR014016 UvrD-like helicase, ATP-binding domain IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR010899 Protein of unknown function UPF0344 IPR014033 Arginase IPR006035 Ureohydrolase IPR023696 Ureohydrolase domain superfamily IPR020855 Ureohydrolase, manganese-binding site IPR014033 Arginase IPR006035 Ureohydrolase IPR023696 Ureohydrolase domain superfamily IPR020855 Ureohydrolase, manganese-binding site IPR003691 Putative fluoride ion transporter CrcB IPR003691 Putative fluoride ion transporter CrcB IPR028366 Phosphate transport system protein PhoU IPR038078 PhoU-like domain superfamily IPR026022 PhoU domain IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR015850 ABC transporter, phosphate import, PstB IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005670 Phosphate transport system permease protein 1 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR005672 Phosphate transport system permease protein PstA IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR011864 Phosphate ABC transporter, permease protein PstC IPR024370 PBP domain IPR011862 Phosphate binding protein IPR036188 FAD/NAD(P)-binding domain superfamily IPR023753 FAD/NAD(P)-binding domain IPR022890 Ferredoxin--NADP reductase, type 2 IPR011006 CheY-like superfamily IPR001867 OmpR/PhoB-type DNA-binding domain IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR039420 Transcriptional regulatory protein WalR-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR011006 CheY-like superfamily IPR001867 OmpR/PhoB-type DNA-binding domain IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR039420 Transcriptional regulatory protein WalR-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR011991 ArsR-like helix-turn-helix domain IPR018334 ArsR-type transcription regulator, HTH motif IPR001845 HTH ArsR-type DNA-binding domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR014064 Arsenate reductase ArsC IPR023485 Phosphotyrosine protein phosphatase I IPR036196 Phosphotyrosine protein phosphatase I superfamily IPR000802 Arsenical pump membrane protein, ArsB IPR011991 ArsR-like helix-turn-helix domain IPR001845 HTH ArsR-type DNA-binding domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR001451 Hexapeptide repeat IPR018357 Hexapeptide transferase, conserved site IPR024688 Maltose/galactoside acetyltransferase IPR011004 Trimeric LpxA-like superfamily IPR001279 Metallo-beta-lactamase IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR034603 Dipeptide epimerase IPR036849 Enolase-like, C-terminal domain superfamily IPR029017 Enolase-like, N-terminal IPR029065 Enolase C-terminal domain-like IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain IPR000064 Endopeptidase, NLPC/P60 domain IPR038765 Papain-like cysteine peptidase superfamily IPR041382 Bacterial dipeptidyl-peptidase SH3 domain IPR006680 Amidohydrolase-related IPR005920 Imidazolonepropionase IPR011059 Metal-dependent hydrolase, composite domain superfamily IPR032466 Metal-dependent hydrolase IPR001684 Ribosomal protein L27 IPR018261 Ribosomal protein L27, conserved site IPR007422 Cysteine protease Prp IPR036764 Cysteine protease Prp superfamily IPR036164 L21-like superfamily IPR028909 Ribosomal protein L21-like IPR001787 Ribosomal protein L21 IPR018258 Ribosomal protein L21, conserved site IPR012340 Nucleic acid-binding, OB-fold IPR019307 RNA-binding protein AU-1/Ribonuclease E/G IPR004659 Ribonuclease E/G IPR022967 RNA-binding domain, S1 IPR003029 S1 domain IPR008915 Peptidase M50 IPR011055 Duplicated hybrid motif IPR016047 Peptidase M23 IPR025877 MobA-like NTP transferase IPR013482 Molybdenum cofactor guanylyltransferase IPR029044 Nucleotide-diphospho-sugar transferases IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily IPR003448 Molybdopterin biosynthesis MoaE IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR036425 MoaB/Mog-like domain superfamily IPR001453 MoaB/Mog domain IPR038987 Molybdopterin biosynthesis protein MoeA-like IPR005111 MoeA, C-terminal, domain IV IPR036688 MoeA, C-terminal, domain IV superfamily IPR005110 MoeA, N-terminal and linker domain IPR036135 MoeA, N-terminal and linker domain superfamily IPR012245 Molybdenum cofactor biosynthesis protein MoaB IPR036425 MoaB/Mog-like domain superfamily IPR001453 MoaB/Mog domain IPR008284 Molybdenum cofactor biosynthesis, conserved site IPR023045 Molybdenum cofactor biosynthesis C IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain IPR006286 Deglycase PfpI IPR029062 Class I glutamine amidotransferase-like IPR002818 DJ-1/PfpI IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain IPR010223 ATP binding protein MinD, bacterial-type IPR025501 ATP binding protein MinD IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal IPR013033 Septum formation inhibitor MinC IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily IPR005526 Septum formation inhibitor MinC, C-terminal IPR007227 Cell shape-determining protein MreD IPR042177 Cell/Rod shape-determining protein MreC, domain 1 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 IPR007221 Rod shape-determining protein MreC IPR004753 Cell shape determining protein MreB IPR037518 MPN domain IPR025657 RadC-like JAB domain IPR010994 RuvA domain 2-like IPR001405 Uncharacterised protein family UPF0758 IPR020891 Uncharacterised protein family UPF0758, conserved site IPR029001 Inosine triphosphate pyrophosphatase-like IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein IPR010627 Peptidase A24A, N-terminal IPR000045 Prepilin type IV endopeptidase, peptidase domain IPR000160 GGDEF domain IPR029787 Nucleotide cyclase IPR001645 Folylpolyglutamate synthetase IPR018109 Folylpolyglutamate synthetase, conserved site IPR036565 Mur-like, catalytic domain superfamily IPR004101 Mur ligase, C-terminal IPR036615 Mur ligase, C-terminal domain superfamily IPR013221 Mur ligase, central IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPR002300 Aminoacyl-tRNA synthetase, class Ia IPR033705 Valyl tRNA synthetase, anticodon-binding domain IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily IPR019499 Valyl-tRNA synthetase, tRNA-binding arm IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain IPR002303 Valine-tRNA ligase IPR018392 LysM domain IPR036779 LysM domain superfamily IPR018392 LysM domain IPR036779 LysM domain superfamily IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase IPR005814 Aminotransferase class-III IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR001731 Delta-aminolevulinic acid dehydratase IPR030656 Delta-aminolevulinic acid dehydratase, active site IPR013785 Aldolase-type TIM barrel IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase IPR039793 Uroporphyrinogen-III synthase IPR000860 Porphobilinogen deaminase IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site IPR022417 Porphobilinogen deaminase, N-terminal IPR022418 Porphobilinogen deaminase, C-terminal IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily IPR002541 Cytochrome c assembly protein IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal IPR018214 Glutamyl-tRNA reductase, conserved site IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily IPR036291 NAD(P)-binding domain superfamily IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase IPR030393 EngB-type guanine nucleotide-binding (G) domain IPR019987 GTP-binding protein, ribosome biogenesis, YsxC IPR006073 GTP binding domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003959 ATPase, AAA-type, core IPR027543 Lon protease, bacterial IPR004815 Lon protease, bacterial/eukaryotic-type IPR008269 Peptidase S16, Lon proteolytic domain IPR027065 Lon protease IPR003111 Lon, substrate-binding domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR008268 Peptidase S16, active site IPR015947 PUA-like superfamily IPR020568 Ribosomal protein S5 domain 2-type fold IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPR003593 AAA+ ATPase domain IPR003959 ATPase, AAA-type, core IPR008269 Peptidase S16, Lon proteolytic domain IPR027065 Lon protease IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR008268 Peptidase S16, active site IPR020568 Ribosomal protein S5 domain 2-type fold IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPR014251 Sporulation protease LonB IPR003593 AAA+ ATPase domain IPR003959 ATPase, AAA-type, core IPR019489 Clp ATPase, C-terminal IPR004487 Clp protease, ATP-binding subunit ClpX IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR010603 Zinc finger, ClpX C4-type IPR038366 Zinc finger, ClpX C4-type superfamily IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain IPR005215 Trigger factor IPR008880 Trigger factor, C-terminal IPR037041 Trigger factor, C-terminal domain superfamily IPR008881 Trigger factor, ribosome-binding, bacterial IPR036611 Trigger factor ribosome-binding domain superfamily IPR027304 Trigger factor/SurA domain superfamily IPR013026 Tetratricopeptide repeat-containing domain IPR011990 Tetratricopeptide-like helical domain superfamily IPR019734 Tetratricopeptide repeat IPR004431 3-isopropylmalate dehydratase, small subunit IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain IPR033940 3-isopropylmalate dehydratase, swivel domain IPR024775 DinB-like domain IPR034660 DinB/YfiT-like putative metalloenzymes IPR023774 Putative metal-dependent hydrolase YfiT IPR004430 3-isopropylmalate dehydratase, large subunit IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain IPR018136 Aconitase family, 4Fe-4S cluster binding site IPR036008 Aconitase, iron-sulfur domain IPR033941 3-Isopropylmalate dehydratase, catalytic domain IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site IPR024084 Isopropylmalate dehydrogenase-like domain IPR004429 Isopropylmalate dehydrogenase IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site IPR013785 Aldolase-type TIM barrel IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily IPR005671 2-isopropylmalate synthase, bacterial-type IPR000891 Pyruvate carboxyltransferase IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPR013023 Ketol-acid reductoisomerase IPR000506 Ketol-acid reductoisomerase, C-terminal IPR013116 Ketol-acid reductoisomerase, N-terminal IPR014359 Ketol-acid reductoisomerase, prokaryotic IPR036291 NAD(P)-binding domain superfamily IPR004789 Acetolactate synthase, small subunit IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal IPR019455 Acetolactate synthase, small subunit, C-terminal IPR002912 ACT domain IPR039557 AHAS, ACT domain IPR012846 Acetolactate synthase, large subunit, biosynthetic IPR039368 Acetolactate synthase large subunit, TPP binding domain IPR029035 DHS-like NAD/FAD-binding domain superfamily IPR029061 Thiamin diphosphate-binding fold IPR012000 Thiamine pyrophosphate enzyme, central domain IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding IPR042096 Dihydroxy-acid dehydratase, C-terminal IPR004404 Dihydroxy-acid dehydratase IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site IPR037237 IlvD/EDD, N-terminal domain IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type IPR029052 Metallo-dependent phosphatase-like IPR041802 YfcE-like, metallophosphatase domain IPR020935 Phosphodiesterase YfcE, conserved site IPR000979 Phosphodiesterase MJ0936/Vps29 IPR020922 dITP/XTP pyrophosphatase IPR002637 Ham1-like protein IPR029001 Inosine triphosphate pyrophosphatase-like IPR001247 Exoribonuclease, phosphorolytic domain 1 IPR015847 Exoribonuclease, phosphorolytic domain 2 IPR036345 Exoribonuclease, PH domain 2 superfamily IPR027408 PNPase/RNase PH domain superfamily IPR020568 Ribosomal protein S5 domain 2-type fold IPR002381 Ribonuclease PH, bacterial-type IPR018336 Ribonuclease PH, conserved site IPR019606 GerMN domain IPR015942 Asp/Glu/hydantoin racemase IPR001920 Asp/Glu racemase IPR018187 Asp/Glu racemase, active site 1 IPR033134 Asp/Glu racemase, active site 2 IPR004391 Glutamate racemase IPR008279 PEP-utilising enzyme, mobile domain IPR018274 PEP-utilising enzyme, active site IPR000121 PEP-utilising enzyme, C-terminal IPR023151 PEP-utilising enzyme, conserved site IPR036637 Phosphohistidine domain superfamily IPR024692 Phosphotransferase system, enzyme I IPR006318 Phosphotransferase system, enzyme I-like IPR008731 Phosphotransferase system, enzyme I N-terminal IPR036618 PtsI, HPr-binding domain superfamily IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IPR040442 Pyruvate kinase-like domain superfamily IPR000032 Phosphocarrier protein HPr-like IPR035895 HPr-like superfamily IPR001020 Phosphotransferase system, HPr histidine phosphorylation site IPR002114 Phosphotransferase system, HPr serine phosphorylation site IPR016032 Signal transduction response regulator, C-terminal effector IPR000792 Transcription regulator LuxR, C-terminal IPR036388 Winged helix-like DNA-binding domain superfamily IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR000835 MarR-type HTH domain IPR023187 Transcriptional regulator MarR-type, conserved site IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR038750 Uncharacterized protein YczE/YyaS-like IPR006056 RidA family IPR019897 RidA, conserved site IPR035959 RutC-like superfamily IPR006175 YjgF/YER057c/UK114 family IPR008535 Protein of unknown function DUF817 IPR015797 NUDIX hydrolase-like domain superfamily IPR000086 NUDIX hydrolase domain IPR036010 2Fe-2S ferredoxin-like superfamily IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IPR012675 Beta-grasp domain superfamily IPR009051 Alpha-helical ferredoxin IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein IPR025192 Succinate dehydogenase/fumarate reductase N-terminal IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain IPR036188 FAD/NAD(P)-binding domain superfamily IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily IPR011138 Succinate dehydrogenase cytochrome b558 subunit IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit IPR003593 AAA+ ATPase domain IPR003838 ABC transporter permease protein domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR017911 ABC transporter, macrolide export, ATP-binding domain IPR025857 MacB-like periplasmic core domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003445 Cation transporter IPR019642 Protein of unknown function DUF2507 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily IPR036393 Acetylglutamate kinase-like superfamily IPR002912 ACT domain IPR041740 Aspartokinase catalytic domain IPR001048 Aspartate/glutamate/uridylate kinase IPR005260 Aspartate kinase, monofunctional class IPR001341 Aspartate kinase IPR018042 Aspartate kinase, conserved site IPR027795 CASTOR, ACT domain IPR000305 GIY-YIG endonuclease IPR035901 GIY-YIG endonuclease superfamily IPR010994 RuvA domain 2-like IPR001943 UVR domain IPR036876 UVR domain superfamily IPR004791 UvrABC system, subunit C IPR001162 UvrC family homology region IPR038476 UvrC homology region 2 superfamily IPR005746 Thioredoxin IPR036249 Thioredoxin-like superfamily IPR017937 Thioredoxin, conserved site IPR013766 Thioredoxin domain IPR029035 DHS-like NAD/FAD-binding domain superfamily IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal IPR001308 Electron transfer flavoprotein alpha subunit/FixB IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal IPR018206 Electron transfer flavoprotein subunit alpha, conserved site IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal IPR012255 Electron transfer flavoprotein, beta subunit IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR029045 ClpP/crotonase-like domain superfamily IPR018376 Enoyl-CoA hydratase/isomerase, conserved site IPR001753 Enoyl-CoA hydratase/isomerase IPR025110 AMP-binding enzyme, C-terminal domain IPR020845 AMP-binding, conserved site IPR000873 AMP-dependent synthetase/ligase IPR042099 AMP-dependent synthetase-like superfamily IPR025110 AMP-binding enzyme, C-terminal domain IPR020845 AMP-binding, conserved site IPR000873 AMP-dependent synthetase/ligase IPR042099 AMP-dependent synthetase-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR025966 Oligopeptide transport permease C-like, N-terminal domain IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR025966 Oligopeptide transport permease C-like, N-terminal domain IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR025966 Oligopeptide transport permease C-like, N-terminal domain IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IPR037523 Vicinal oxygen chelate (VOC) domain IPR007140 Protein of unknown function DUF350 IPR000432 DNA mismatch repair protein MutS, C-terminal IPR007696 DNA mismatch repair protein MutS, core IPR036187 DNA mismatch repair protein MutS, core domain superfamily IPR005747 Endonuclease MutS2 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR002625 Smr domain IPR036063 Smr domain superfamily IPR002054 DNA-directed DNA polymerase X IPR010996 DNA polymerase beta-like, N-terminal domain IPR027421 DNA polymerase lambda lyase domain superfamily IPR037160 DNA polymerase, thumb domain superfamily IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 IPR004013 PHP domain IPR003141 Polymerase/histidinol phosphatase, N-terminal IPR016195 Polymerase/histidinol phosphatase-like IPR029398 DNA polymerase beta, thumb domain IPR022311 Uncharacterised conserved protein UCP005047, YshC IPR003825 Colicin V production, CvpA IPR007838 Cell division protein ZapA-like IPR036192 Cell division protein ZapA-like superfamily IPR005146 B3/B4 tRNA-binding domain IPR009061 Putative DNA-binding domain superfamily IPR005121 Ferrodoxin-fold anticodon-binding domain IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily IPR012340 Nucleic acid-binding, OB-fold IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain IPR002547 tRNA-binding domain IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain IPR005147 tRNA synthetase, B5-domain IPR006195 Aminoacyl-tRNA synthetase, class II IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial IPR002319 Phenylalanyl-tRNA synthetase IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm IPR029028 Alpha/beta knot methyltransferases IPR029064 50S ribosomal protein L30e-like IPR001537 tRNA/rRNA methyltransferase, SpoU type IPR013123 RNA 2-O ribose methyltransferase, substrate binding IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IPR017525 Small, acid-soluble spore protein I IPR003719 Phenazine biosynthesis PhzF protein IPR007837 DNA damage-inducible protein DinB IPR034660 DinB/YfiT-like putative metalloenzymes IPR001279 Metallo-beta-lactamase IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPR022877 Protein of unknown funcion UPF0173 IPR032710 NTF2-like domain superfamily IPR039425 RNA polymerase sigma-70 like IPR014284 RNA polymerase sigma-70 like domain IPR014305 RNA polymerase sigma-G type, actinobacteria IPR000838 RNA polymerase sigma factor 70, ECF, conserved site IPR007627 RNA polymerase sigma-70 region 2 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 IPR013325 RNA polymerase sigma factor, region 2 IPR013324 RNA polymerase sigma factor, region 3/4-like IPR037401 SnoaL-like domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR032710 NTF2-like domain superfamily IPR039425 RNA polymerase sigma-70 like IPR014284 RNA polymerase sigma-70 like domain IPR014305 RNA polymerase sigma-G type, actinobacteria IPR000838 RNA polymerase sigma factor 70, ECF, conserved site IPR007627 RNA polymerase sigma-70 region 2 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 IPR013325 RNA polymerase sigma factor, region 2 IPR013324 RNA polymerase sigma factor, region 3/4-like IPR037401 SnoaL-like domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR001907 ATP-dependent Clp protease proteolytic subunit IPR029045 ClpP/crotonase-like domain superfamily IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA IPR033135 ClpP, histidine active site IPR003838 ABC transporter permease protein domain IPR005085 Carbohydrate binding module family 25 IPR025857 MacB-like periplasmic core domain IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR039562 Membrane fusion protein, biotin-lipoyl like domain IPR022824 Multidrug resistance protein MdtA IPR006143 RND efflux pump, membrane fusion protein IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily IPR030489 Transcription regulator Rrf2-type, conserved site IPR000944 Transcription regulator Rrf2-type IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR000957 Sulphate/thiosulphate-binding, conserved site IPR034408 Sulphate/thiosulphate-binding site IPR005669 Thiosulphate/Sulfate-binding protein IPR011865 Sulphate ABC transporter, permease protein CysT IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR005667 Sulphate ABC transporter permease protein 2 IPR011866 Sulphate ABC transporter, permease protein CysW IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR005667 Sulphate ABC transporter permease protein 2 IPR003593 AAA+ ATPase domain IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR041193 CysA, C-terminal regulatory domain IPR008995 Molybdate/tungstate binding, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005666 Sulphate transport system permease protein 1 IPR024765 TOBE-like domain IPR008007 Peptidase M42 IPR023367 Peptidase M42, domain 2 IPR010718 Protein of unknown function DUF1294 IPR005813 Ribosomal protein L20 IPR035566 Ribosomal protein L20, C-terminal IPR021137 Ribosomal protein L35 IPR018265 Ribosomal protein L35, conserved site IPR001706 Ribosomal protein L35, non-mitochondrial IPR037229 Ribosomal protein L35 superfamily IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily IPR019813 Translation initiation factor 3, conserved site IPR001288 Translation initiation factor 3 IPR019815 Translation initiation factor 3, C-terminal IPR019814 Translation initiation factor 3, N-terminal IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) IPR006195 Aminoacyl-tRNA synthetase, class II IPR004154 Anticodon-binding IPR036621 Anticodon-binding domain superfamily IPR012675 Beta-grasp domain superfamily IPR004095 TGS IPR012676 TGS-like IPR002320 Threonine-tRNA ligase, class IIa IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily IPR033728 Threonine-tRNA ligase catalytic core domain IPR012947 Threonyl/alanyl tRNA synthetase, SAD IPR014199 Sporulation protein YtxC IPR013785 Aldolase-type TIM barrel IPR022431 Cyclic dehypoxanthine futalosine synthase IPR006638 Elp3/MiaB/NifB IPR034405 F420, menaquinone cofactor biosynthesis IPR020050 FO synthase, subunit 2 IPR007197 Radical SAM IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR009928 Primosomal DnaI, N-terminal IPR002611 IstB-like ATP-binding protein IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR006343 DnaD domain IPR005144 ATP-cone domain IPR003796 Ribonucleotide reductase regulator NrdR-like IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic IPR016067 S-adenosylmethionine decarboxylase, core IPR017716 S-adenosylmethionine decarboxylase proenzyme IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I IPR036291 NAD(P)-binding domain superfamily IPR001977 Dephospho-CoA kinase IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003810 Putative manganese efflux pump IPR014205 Sporulation protein YtaF IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site IPR020629 Formamidopyrimidine-DNA glycosylase IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain IPR035937 MutM-like, N-terminal IPR010979 Ribosomal protein S13-like, H2TH IPR000214 Zinc finger, DNA glycosylase/AP lyase-type IPR010663 Zinc finger, FPG/IleRS-type IPR002562 3'-5' exonuclease domain IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal IPR002421 5'-3' exonuclease, N-terminal IPR036279 5'-3' exonuclease, C-terminal domain superfamily IPR019760 DNA-directed DNA polymerase, family A, conserved site IPR001098 DNA-directed DNA polymerase, family A, palm domain IPR020045 DNA polymerase I-like, H3TH domain IPR018320 DNA polymerase 1 IPR002298 DNA polymerase A IPR008918 Helix-hairpin-helix motif, class 2 IPR029060 PIN-like domain superfamily IPR012337 Ribonuclease H-like superfamily IPR036397 Ribonuclease H superfamily IPR027022 ABC transporter permease protein, BceB-type IPR027022 ABC transporter permease protein, BceB-type IPR001107 Band 7 domain IPR036013 Band 7/SPFH domain superfamily IPR010200 HflC IPR001107 Band 7 domain IPR036013 Band 7/SPFH domain superfamily IPR010201 HflK IPR020980 Menbrane protein HflK, N-terminal IPR001972 Stomatin family IPR011006 CheY-like superfamily IPR001867 OmpR/PhoB-type DNA-binding domain IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR039420 Transcriptional regulatory protein WalR-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR001557 L-lactate/malate dehydrogenase IPR022383 Lactate/malate dehydrogenase, C-terminal IPR001236 Lactate/malate dehydrogenase, N-terminal IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal IPR011275 Malate dehydrogenase, type 3 IPR036291 NAD(P)-binding domain superfamily IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic IPR024084 Isopropylmalate dehydrogenase-like domain IPR011278 2-methylcitrate synthase/citrate synthase type I IPR016142 Citrate synthase-like, large alpha subdomain IPR016143 Citrate synthase-like, small alpha subdomain IPR002020 Citrate synthase IPR019810 Citrate synthase active site IPR024176 Citrate synthase, bacterial-type IPR036969 Citrate synthase superfamily IPR007382 Uncharacterised protein family UPF0756, transmembrame IPR007313 FxsA cytoplasmic membrane protein IPR008279 PEP-utilising enzyme, mobile domain IPR036637 Phosphohistidine domain superfamily IPR001697 Pyruvate kinase IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IPR040442 Pyruvate kinase-like domain superfamily IPR011037 Pyruvate kinase-like, insert domain superfamily IPR018209 Pyruvate kinase, active site IPR015793 Pyruvate kinase, barrel IPR015795 Pyruvate kinase, C-terminal IPR036918 Pyruvate kinase, C-terminal domain superfamily IPR015806 Pyruvate kinase, insert domain superfamily IPR022953 ATP-dependent 6-phosphofructokinase IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic IPR015912 Phosphofructokinase, conserved site IPR000023 Phosphofructokinase domain IPR035966 Phosphofructokinase superfamily IPR001095 Acetyl-CoA carboxylase, alpha subunit IPR029045 ClpP/crotonase-like domain superfamily IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal IPR034733 Acetyl-CoA carboxylase IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit IPR029045 ClpP/crotonase-like domain superfamily IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal IPR041010 Acetyl-coA carboxylase zinc finger domain IPR011711 GntR, C-terminal IPR008920 Transcription regulator FadR/GntR, C-terminal IPR000524 Transcription regulator HTH, GntR IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR015884 Malic enzyme, conserved site IPR012301 Malic enzyme, N-terminal domain IPR037062 Malic enzyme, N-terminal domain superfamily IPR012302 Malic enzyme, NAD-binding IPR001891 Malic oxidoreductase IPR036291 NAD(P)-binding domain superfamily IPR015884 Malic enzyme, conserved site IPR012301 Malic enzyme, N-terminal domain IPR037062 Malic enzyme, N-terminal domain superfamily IPR012302 Malic enzyme, NAD-binding IPR001891 Malic oxidoreductase IPR036291 NAD(P)-binding domain superfamily IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain IPR040982 DNA polymerase III alpha subunit finger domain IPR029460 DNA polymerase, helix-hairpin-helix motif IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type IPR004013 PHP domain IPR003141 Polymerase/histidinol phosphatase, N-terminal IPR016195 Polymerase/histidinol phosphatase-like IPR004805 DNA polymerase III, alpha subunit IPR025689 Sporulation protein YtrH IPR001667 DDH domain IPR038763 DHH phosphoesterase superfamily IPR003156 DHHA1 domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR000644 CBS domain IPR010766 DRTGG IPR029069 HotDog domain superfamily IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily IPR006683 Thioesterase domain IPR000524 Transcription regulator HTH, GntR IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR001279 Metallo-beta-lactamase IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPR022877 Protein of unknown funcion UPF0173 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal IPR036005 Creatinase/aminopeptidase-like IPR000587 Creatinase, N-terminal IPR000994 Peptidase M24 IPR001714 Peptidase M24, methionine aminopeptidase IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site IPR008141 Alanine dehydrogenase IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain IPR036291 NAD(P)-binding domain superfamily IPR036291 NAD(P)-binding domain superfamily IPR002347 Short-chain dehydrogenase/reductase SDR IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR025302 Domain of unknown function DUF4162 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR006015 Universal stress protein A family IPR006016 UspA IPR029419 Argininosuccinate lyase, C-terminal IPR009049 Argininosuccinate lyase IPR024083 Fumarase/histidase, N-terminal IPR020557 Fumarate lyase, conserved site IPR000362 Fumarate lyase family IPR022761 Fumarate lyase, N-terminal IPR008948 L-Aspartase-like IPR001518 Argininosuccinate synthase IPR018223 Argininosuccinate synthase, conserved site IPR023434 Argininosuccinate synthase, type 1 subfamily IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR024787 EcsC protein IPR020873 3'-5' exoribonuclease YhaM IPR003607 HD/PDEase domain IPR006674 HD domain IPR004372 Acetate/propionate kinase IPR000890 Aliphatic acid kinase, short-chain IPR023865 Aliphatic acid kinase, short-chain, conserved site IPR003356 DNA methylase, adenine-specific IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR032688 ABC-2 family transporter protein IPR013740 Redoxin IPR036249 Thioredoxin-like superfamily IPR013766 Thioredoxin domain IPR002065 Thiol peroxidase Tpx IPR018219 Thiol peroxidase conserved site IPR014229 Sporulation protein YtfJ IPR010432 RDD IPR029045 ClpP/crotonase-like domain superfamily IPR004635 Peptidase S49, SppA IPR002142 Peptidase S49 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal IPR017437 ATP-NAD kinase, PpnK-type, C-terminal IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily IPR002504 NAD kinase IPR013108 Amidohydrolase 3 IPR011059 Metal-dependent hydrolase, composite domain superfamily IPR032466 Metal-dependent hydrolase IPR033932 YtcJ like IPR025110 AMP-binding enzyme, C-terminal domain IPR020845 AMP-binding, conserved site IPR000873 AMP-dependent synthetase/ligase IPR042099 AMP-dependent synthetase-like superfamily IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR020536 Thil, AANH domain IPR004114 THUMP domain IPR003720 tRNA sulfurtransferase ThiI IPR030678 Peptide/nickel binding protein, MppA-type IPR039424 Solute-binding protein family 5 IPR023765 Solute-binding protein family 5, conserved site IPR000914 Solute-binding protein family 5 domain IPR030678 Peptide/nickel binding protein, MppA-type IPR039424 Solute-binding protein family 5 IPR023765 Solute-binding protein family 5, conserved site IPR000914 Solute-binding protein family 5 domain IPR000192 Aminotransferase class V domain IPR016454 Cysteine desulfurase IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR010379 Septation ring formation regulator EzrA IPR010140 Histidinol phosphate phosphatase, HisJ IPR004013 PHP domain IPR016195 Polymerase/histidinol phosphatase-like IPR023772 DNA-binding HTH domain, TetR-type, conserved site IPR009057 Homeobox-like domain superfamily IPR001647 DNA-binding HTH domain, TetR-type IPR000614 Free Met sulfoxide reductase conserved site IPR003018 GAF domain IPR029016 GAF-like domain superfamily IPR022801 Ribosomal protein S4/S9 IPR001912 Ribosomal protein S4/S9, N-terminal IPR005709 Ribosomal protein S4, bacterial-type IPR018079 Ribosomal protein S4, conserved site IPR002942 RNA-binding S4 domain IPR036986 RNA-binding S4 domain superfamily IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR005829 Sugar transporter, conserved site IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR039425 RNA polymerase sigma-70 like IPR014284 RNA polymerase sigma-70 like domain IPR007627 RNA polymerase sigma-70 region 2 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 IPR013325 RNA polymerase sigma factor, region 2 IPR013324 RNA polymerase sigma factor, region 3/4-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR003416 MgtC/SapB/SrpB/YhiD family IPR003416 MgtC/SapB/SrpB/YhiD family IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPR002305 Aminoacyl-tRNA synthetase, class Ic IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR002942 RNA-binding S4 domain IPR036986 RNA-binding S4 domain superfamily IPR002307 Tyrosine-tRNA ligase IPR024088 Tyrosine-tRNA ligase, bacterial-type IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 IPR012338 Beta-lactamase/transpeptidase-like IPR001264 Glycosyl transferase, family 51 IPR023346 Lysozyme-like domain superfamily IPR036950 Penicillin binding protein transglycosylase domain IPR001460 Penicillin-binding protein, transpeptidase IPR000843 LacI-type HTH domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR028082 Periplasmic binding protein-like I IPR023588 Transcription regulator HTH, PurR IPR008264 Beta-glucanase IPR013320 Concanavalin A-like lectin/glucanase domain superfamily IPR000757 Glycoside hydrolase family 16 IPR008263 Glycoside hydrolase, family 16, active site IPR008264 Beta-glucanase IPR013320 Concanavalin A-like lectin/glucanase domain superfamily IPR000757 Glycoside hydrolase family 16 IPR008263 Glycoside hydrolase, family 16, active site IPR025110 AMP-binding enzyme, C-terminal domain IPR020845 AMP-binding, conserved site IPR000873 AMP-dependent synthetase/ligase IPR042099 AMP-dependent synthetase-like superfamily IPR024699 Acetoin utilization protein AcuA IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR000644 CBS domain IPR003085 Acetoin utilization protein AcuC IPR000286 Histone deacetylase family IPR023801 Histone deacetylase domain IPR037138 Histone deacetylase domain superfamily IPR023696 Ureohydrolase domain superfamily IPR010049 MTA/SAH nucleosidase IPR000845 Nucleoside phosphorylase domain IPR035994 Nucleoside phosphorylase superfamily IPR025713 Motility protein B, N-terminal domain IPR006665 OmpA-like domain IPR036737 OmpA-like domain superfamily IPR000540 Flagellar motor protein MotA, conserved site IPR002898 MotA/TolQ/ExbB proton channel IPR006377 Catabolite control protein A IPR000843 LacI-type HTH domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR028082 Periplasmic binding protein-like I IPR013785 Aldolase-type TIM barrel IPR010954 Chorismate mutase, Firmicutes/Deinococcus IPR036979 Chorismate mutase domain superfamily IPR002701 Chorismate mutase II, prokaryotic-type IPR006218 DAHP synthetase I/KDSA IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 IPR011055 Duplicated hybrid motif IPR036878 Glucose permease domain IIB IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 IPR003352 Phosphotransferase system, EIIC IPR013013 Phosphotransferase system, EIIC component, type 1 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component IPR001996 Phosphotransferase system, IIB component, type 1 IPR011055 Duplicated hybrid motif IPR036878 Glucose permease domain IIB IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 IPR003352 Phosphotransferase system, EIIC IPR013013 Phosphotransferase system, EIIC component, type 1 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component IPR001996 Phosphotransferase system, IIB component, type 1 IPR024623 Uncharacterised protein family YtxH IPR035097 Peptidase M29, N-terminal IPR000787 Peptidase M29 IPR036565 Mur-like, catalytic domain superfamily IPR004101 Mur ligase, C-terminal IPR036615 Mur ligase, C-terminal domain superfamily IPR013221 Mur ligase, central IPR000713 Mur ligase, N-terminal catalytic domain IPR005758 UDP-N-acetylmuramate--L-alanine ligase IPR003593 AAA+ ATPase domain IPR041027 FtsK alpha domain IPR002543 FtsK domain IPR018541 FtsK gamma domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR027855 Domain of unknown function DUF4479 IPR012340 Nucleic acid-binding, OB-fold IPR002547 tRNA-binding domain IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain IPR037154 YtpR-like superfamily IPR010838 Protein of unknown unction DUF1444 IPR036249 Thioredoxin-like superfamily IPR013766 Thioredoxin domain IPR004341 CAT RNA-binding domain IPR036650 CAT RNA-binding domain superfamily IPR011608 PRD domain IPR036634 PRD domain superfamily IPR001550 Transcription antiterminator, conserved site IPR004341 CAT RNA-binding domain IPR036650 CAT RNA-binding domain superfamily IPR011608 PRD domain IPR036634 PRD domain superfamily IPR001550 Transcription antiterminator, conserved site IPR019884 YtoQ family protein IPR029001 Inosine triphosphate pyrophosphatase-like IPR002786 Inosine/xanthosine triphosphatase IPR026533 Non-canonical purine NTP phosphatase/PRRC1 IPR008007 Peptidase M42 IPR023367 Peptidase M42, domain 2 IPR025711 PepSY domain IPR017856 Integrase-like, N-terminal IPR002876 Transcriptional regulator TACO1-like IPR026564 Transcriptional regulator TACO1-like, domain 3 IPR026562 Probable transcriptional regulatory protein YeeN IPR029072 YebC-like IPR001279 Metallo-beta-lactamase IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type IPR002575 Aminoglycoside phosphotransferase IPR011009 Protein kinase-like domain superfamily IPR006047 Glycosyl hydrolase, family 13, catalytic domain IPR004193 Glycoside hydrolase, family 13, N-terminal IPR013780 Glycosyl hydrolase, all-beta IPR017853 Glycoside hydrolase superfamily IPR013783 Immunoglobulin-like fold IPR014756 Immunoglobulin E-set IPR040697 Pullulanase, N1 domain IPR011840 Pullulanase, type I IPR002912 ACT domain IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain IPR002376 Formyl transferase, N-terminal IPR036477 Formyl transferase, N-terminal domain superfamily IPR004810 Formyltetrahydrofolate deformylase IPR007300 CidB/LrgB family IPR023760 Holin-like protein CidA IPR005538 LrgA/CidA family IPR009097 Cyclic phosphodiesterase IPR014051 Phosphoesterase, HXTX IPR004175 RNA 2',3'-cyclic phosphodiesterase IPR005856 Cysteine synthase IPR005859 Cysteine synthase CysK IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site IPR001926 Pyridoxal-phosphate dependent enzyme IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site IPR036264 Bacterial exopeptidase dimerisation domain IPR010964 Peptidase M20A, peptidase V-related IPR002933 Peptidase M20 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain IPR020103 Pseudouridine synthase, catalytic domain superfamily IPR006145 Pseudouridine synthase, RsuA/RluA IPR000748 Pseudouridine synthase, RsuA/RluB/E/F IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site IPR002942 RNA-binding S4 domain IPR036986 RNA-binding S4 domain superfamily IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type IPR029303 Polysaccharide biosynthesis protein, C-terminal domain IPR002797 Polysaccharide biosynthesis protein IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like IPR036188 FAD/NAD(P)-binding domain superfamily IPR023166 HI0933-like insert domain superfamily IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPR002300 Aminoacyl-tRNA synthetase, class Ia IPR002302 Leucine-tRNA ligase IPR025709 Leucyl-tRNA synthetase, editing domain IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding IPR015413 Methionyl/Leucyl tRNA synthetase IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR023603 Threonine aldolase IPR039661 ELP3/YhcC IPR006638 Elp3/MiaB/NifB IPR032432 Radical SAM, C-terminal extension IPR007197 Radical SAM IPR023404 Radical SAM, alpha/beta horseshoe IPR005911 Protein YhcC-like IPR010719 Putative rRNA methylase IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR001765 Carbonic anhydrase IPR036874 Carbonic anhydrase superfamily IPR019712 Tetraprenyl-beta-curcumene synthase YtpB-like IPR029058 Alpha/Beta hydrolase fold IPR000073 Alpha/beta hydrolase fold-1 IPR022742 Serine aminopeptidase, S33 IPR001451 Hexapeptide repeat IPR011004 Trimeric LpxA-like superfamily IPR019957 ABC transporter, high-affinity heme uptake system protein IsdE IPR002491 ABC transporter periplasmic binding domain IPR037294 ABC transporter, BtuC-like IPR000522 ABC transporter, permease protein, BtuC-like IPR007138 Antibiotic biosynthesis monooxygenase domain IPR011008 Dimeric alpha-beta barrel IPR023953 Heme oxygenase IsdG IPR005754 Sortase family IPR023365 Sortase domain superfamily IPR009835 Sortase B family IPR015986 Sortase B, Firmicutes IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR037294 ABC transporter, BtuC-like IPR000522 ABC transporter, permease protein, BtuC-like IPR019957 ABC transporter, high-affinity heme uptake system protein IsdE IPR002491 ABC transporter periplasmic binding domain IPR006635 NEAT domain IPR037250 NEAT domain superfamily IPR017502 Sortase B cell surface sorting signal IPR019909 Haem uptake protein IsdC IPR006635 NEAT domain IPR037250 NEAT domain superfamily IPR017502 Sortase B cell surface sorting signal IPR022631 S-adenosylmethionine synthetase, conserved site IPR022630 S-adenosylmethionine synthetase, C-terminal IPR022629 S-adenosylmethionine synthetase, central domain IPR022628 S-adenosylmethionine synthetase, N-terminal IPR002133 S-adenosylmethionine synthetase IPR022636 S-adenosylmethionine synthetase superfamily IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site IPR002577 Helix-turn-helix, HxlR type IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR032808 DoxX family IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IPR037523 Vicinal oxygen chelate (VOC) domain IPR000486 Extradiol ring-cleavage dioxygenase, class I /II IPR029058 Alpha/Beta hydrolase fold IPR002471 Peptidase S9, serine active site IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain IPR020476 NUDIX hydrolase IPR015797 NUDIX hydrolase-like domain superfamily IPR020084 NUDIX hydrolase, conserved site IPR000086 NUDIX hydrolase domain IPR014078 Nucleoside triphosphatase YtkD IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG IPR004839 Aminotransferase, class I/classII IPR027619 Putative C-S lyase IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR016161 Aldehyde/histidinol dehydrogenase IPR016163 Aldehyde dehydrogenase, C-terminal IPR016160 Aldehyde dehydrogenase, cysteine active site IPR016162 Aldehyde dehydrogenase, N-terminal IPR015590 Aldehyde dehydrogenase domain IPR012394 Aldehyde dehydrogenase NAD(P)-dependent IPR010102 Succinate semialdehyde dehydrogenase IPR023845 Domain of unknown function DUF3817, transmembrane IPR023841 Bacillithiol biosynthesis deacetylase BshB2 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related IPR024078 Putative deacetylase LmbE-like domain superfamily IPR029039 Flavoprotein-like superfamily IPR005025 NADPH-dependent FMN reductase-like IPR020048 NADPH-dependent FMN reductase, SsuE IPR010611 3D domain IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 IPR011098 G5 domain IPR036908 RlpA-like domain superfamily IPR010611 3D domain IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 IPR011098 G5 domain IPR036908 RlpA-like domain superfamily IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IPR000524 Transcription regulator HTH, GntR IPR011663 UbiC transcription regulator-associated IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IPR000524 Transcription regulator HTH, GntR IPR011663 UbiC transcription regulator-associated IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR035472 RpiR-like, SIS domain IPR001347 Sugar isomerase (SIS) IPR022951 Uncharacterised protein family UPF0309 IPR029058 Alpha/Beta hydrolase fold IPR008391 Acetyl xylan esterase IPR039069 Carbohydrate esterase 7 family IPR030676 Citrate carrier CitT-related IPR001898 Solute carrier family 13 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR011867 Molybdate ABC transporter, permease protein IPR005950 Molybdate ABC transporter, substrate-binding protein IPR041879 YvgL-like, substrate binding domain IPR013099 Potassium channel domain IPR036291 NAD(P)-binding domain superfamily IPR003148 Regulator of K+ conductance, N-terminal IPR014967 Uncharacterised protein family, YugN-like IPR036491 YugN-like superfamily IPR000944 Transcription regulator Rrf2-type IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR001672 Phosphoglucose isomerase (PGI) IPR018189 Phosphoglucose isomerase, conserved site IPR035476 Phosphoglucose isomerase, SIS domain 1 IPR035482 Phosphoglucose isomerase, SIS domain 2 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA IPR018211 Alcohol dehydrogenase, iron-type, conserved site IPR007211 Protein of unknown function DUF378 IPR023952 Inosose dehydratase IPR030823 IolE/MocC family IPR036237 Xylose isomerase-like superfamily IPR013022 Xylose isomerase-like, TIM barrel domain IPR012340 Nucleic acid-binding, OB-fold IPR022967 RNA-binding domain, S1 IPR003029 S1 domain IPR011545 DEAD/DEAH box helicase domain IPR014001 Helicase superfamily 1/2, ATP-binding domain IPR001650 Helicase, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR014014 RNA helicase, DEAD-box type, Q motif IPR000417 Hydroxyethylthiazole kinase IPR029056 Ribokinase-like IPR004839 Aminotransferase, class I/classII IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR000485 AsnC-type HTH domain IPR011008 Dimeric alpha-beta barrel IPR019888 Transcription regulator AsnC-type IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR012543 Protein of unknown function DUF1694 IPR029064 50S ribosomal protein L30e-like IPR037005 S-ribosylhomocysteinase (LuxS) superfamily IPR011249 Metalloenzyme, LuxS/M16 peptidase-like IPR003815 S-ribosylhomocysteinase (LuxS) IPR017039 Virulence factor BrkB IPR000119 Histone-like DNA-binding protein IPR020816 Histone-like DNA-binding protein, conserved site IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IPR010432 RDD IPR003784 BioY protein IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal IPR032813 Putative Na+/H+ antiporter, N-terminal IPR005907 Glucose-1-phosphate thymidylyltransferase, short form IPR005835 Nucleotidyl transferase domain IPR029044 Nucleotide-diphospho-sugar transferases IPR005888 dTDP-glucose 4,6-dehydratase IPR016040 NAD(P)-binding domain IPR036291 NAD(P)-binding domain superfamily IPR005913 dTDP-4-dehydrorhamnose reductase family IPR036291 NAD(P)-binding domain superfamily IPR029903 RmlD-like substrate binding domain IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related IPR014710 RmlC-like jelly roll fold IPR011051 RmlC-like cupin domain superfamily IPR001173 Glycosyltransferase 2-like IPR029044 Nucleotide-diphospho-sugar transferases IPR001173 Glycosyltransferase 2-like IPR029044 Nucleotide-diphospho-sugar transferases IPR001296 Glycosyl transferase, family 1 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain IPR017814 Mycothiol biosynthesis protein, MshA IPR016040 NAD(P)-binding domain IPR036291 NAD(P)-binding domain superfamily IPR016040 NAD(P)-binding domain IPR036291 NAD(P)-binding domain superfamily IPR001296 Glycosyl transferase, family 1 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain IPR004680 Citrate transporter-like domain IPR031312 Sodium/sulphate symporter, conserved site IPR006037 Regulator of K+ conductance, C-terminal IPR036721 Regulator of K+ conductance, C-terminal domain superfamily IPR002891 Adenylyl-sulfate kinase IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR025980 ATP-sulfurylase PUA-like domain IPR015947 PUA-like superfamily IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR020792 Sulphate adenylyltransferase, prokaryotic-type IPR024951 Sulphate adenylyltransferase catalytic domain IPR002650 Sulphate adenylyltransferase IPR000380 DNA topoisomerase, type IA IPR003601 DNA topoisomerase, type IA, domain 2 IPR023406 DNA topoisomerase, type IA, active site IPR013497 DNA topoisomerase, type IA, central IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 IPR023405 DNA topoisomerase, type IA, core domain IPR003602 DNA topoisomerase, type IA, DNA-binding domain IPR013498 DNA topoisomerase, type IA, zn finger IPR025589 Topoisomerase C-terminal repeat IPR006171 TOPRIM domain IPR034144 DNA topoisomerase 3-like, TOPRIM domain IPR012338 Beta-lactamase/transpeptidase-like IPR007887 NTF2-like N-terminal transpeptidase IPR032710 NTF2-like domain superfamily IPR005311 Penicillin-binding protein, dimerisation domain IPR036138 Penicillin-binding protein, dimerisation domain superfamily IPR001460 Penicillin-binding protein, transpeptidase IPR018389 TRAP transporter solute receptor DctP/TeaA IPR038404 TRAP transporter solute receptor DctP superfamily IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit IPR004681 TRAP transporter large membrane protein DctM IPR007387 TRAP transporter, small membrane protein DctQ IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 IPR004006 DhaK domain IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 IPR004006 DhaK domain IPR009057 Homeobox-like domain superfamily IPR001647 DNA-binding HTH domain, TetR-type IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type IPR012738 Transcription regulator DhaS IPR039643 Dihydroxyacetone kinase phosphotransferase subunit DhaM IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain IPR004701 Phosphotransferase system, mannose-type IIA component IPR036662 Phosphotransferase system, mannose-type IIA component superfamily IPR012737 Dihydroxyacetone kinase, subunit L IPR004007 DhaL domain IPR036117 DhaL domain superfamily IPR002575 Aminoglycoside phosphotransferase IPR011009 Protein kinase-like domain superfamily IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal IPR023042 Peptidase M17, leucine aminopeptidase IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal IPR003832 Protein of unknown function DUF212 IPR002491 ABC transporter periplasmic binding domain IPR023544 ABC transporter, vitamin B12-binding protein IPR010611 3D domain IPR036908 RlpA-like domain superfamily IPR035272 Protein of unknown function DUF5351 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily IPR036188 FAD/NAD(P)-binding domain superfamily IPR023753 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily IPR023753 FAD/NAD(P)-binding domain IPR022890 Ferredoxin--NADP reductase, type 2 IPR000361 FeS cluster biogenesis IPR016092 FeS cluster insertion protein IPR017870 FeS cluster insertion, C-terminal, conserved site IPR035903 HesB-like domain superfamily IPR013785 Aldolase-type TIM barrel IPR022432 Aminodeoxyfutalosine synthase IPR006638 Elp3/MiaB/NifB IPR034405 F420, menaquinone cofactor biosynthesis IPR020050 FO synthase, subunit 2 IPR007197 Radical SAM IPR018510 Diaminopimelate epimerase, active site IPR001653 Diaminopimelate epimerase, DapF IPR009910 Protein of unknown function DUF1450 IPR022916 Protein of unknown function UPF0349 IPR036188 FAD/NAD(P)-binding domain superfamily IPR023753 FAD/NAD(P)-binding domain IPR009190 Protein of unknown function DUF1462 IPR036249 Thioredoxin-like superfamily IPR038218 YuzD-like superfamily IPR034904 Fe-S cluster assembly domain superfamily IPR001075 NIF system FeS cluster assembly, NifU, C-terminal IPR013750 GHMP kinase, C-terminal domain IPR036554 GHMP kinase, C-terminal domain superfamily IPR006204 GHMP kinase N-terminal domain IPR006203 GHMP kinase, ATP-binding, conserved site IPR000870 Homoserine kinase IPR020568 Ribosomal protein S5 domain 2-type fold IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPR001926 Pyridoxal-phosphate dependent enzyme IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site IPR004450 Threonine synthase-like IPR026260 Threonine synthase, bacterial/archaeal IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IPR002912 ACT domain IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding IPR016204 Homoserine dehydrogenase IPR001342 Homoserine dehydrogenase, catalytic IPR019811 Homoserine dehydrogenase, conserved site IPR036291 NAD(P)-binding domain superfamily IPR011009 Protein kinase-like domain superfamily IPR014254 Spore coat protein YutH IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR011006 CheY-like superfamily IPR001867 OmpR/PhoB-type DNA-binding domain IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR039420 Transcriptional regulatory protein WalR-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR036412 HAD-like superfamily IPR006357 HAD-superfamily hydrolase, subfamily IIA IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 IPR023214 HAD superfamily IPR037038 Bsu32300-like superfamily IPR008201 Protein of unknown function DUF86 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR009370 Protein of unknown function DUF1027 IPR038141 YutD-like superfamily IPR019076 Sporulation lipoprotein YhcN/YlaJ-like IPR013785 Aldolase-type TIM barrel IPR006638 Elp3/MiaB/NifB IPR031691 Lipoyl synthase, N-terminal IPR003698 Lipoyl synthase IPR007197 Radical SAM IPR011055 Duplicated hybrid motif IPR016047 Peptidase M23 IPR000175 Sodium:neurotransmitter symporter IPR037272 Sodium:neurotransmitter symporter superfamily IPR001851 ABC transporter, permease IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR028082 Periplasmic binding protein-like I IPR025997 Periplasmic binding protein IPR036291 NAD(P)-binding domain superfamily IPR005979 Light-dependent protochlorophyllide reductase IPR002347 Short-chain dehydrogenase/reductase SDR IPR003313 AraC-type arabinose-binding/dimerisation domain IPR009057 Homeobox-like domain superfamily IPR037923 Transcription regulator HTH-like IPR018060 DNA binding HTH domain, AraC-type IPR018062 HTH domain AraC-type, conserved site IPR014710 RmlC-like jelly roll fold IPR011006 CheY-like superfamily IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR000792 Transcription regulator LuxR, C-terminal IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal IPR012259 Dihydrofolate reductase IPR024072 Dihydrofolate reductase-like domain superfamily IPR017925 Dihydrofolate reductase conserved site IPR001796 Dihydrofolate reductase domain IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily IPR000398 Thymidylate synthase IPR020940 Thymidylate synthase, active site IPR014931 Protein of unknown function DUF1805 IPR036493 Hypothetical protein YunC superfamily IPR008334 5'-Nucleotidase, C-terminal IPR036907 5'-Nucleotidase, C-terminal domain superfamily IPR006179 5'-Nucleotidase/apyrase IPR029052 Metallo-dependent phosphatase-like IPR011240 Phosphoesterase-related protein YunD IPR002763 Protein of unknown function DUF72 IPR036520 UPF0759 superfamily IPR010231 SUF system FeS cluster assembly, SufB IPR000825 SUF system FeS cluster assembly, SufBD IPR037284 SUF system FeS cluster assembly, SufBD superfamily IPR002871 NIF system FeS cluster assembly, NifU, N-terminal IPR002871 NIF system FeS cluster assembly, NifU, N-terminal IPR000192 Aminotransferase class V domain IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IPR010970 Cysteine desulfurase, SufS IPR016454 Cysteine desulfurase IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR000825 SUF system FeS cluster assembly, SufBD IPR037284 SUF system FeS cluster assembly, SufBD superfamily IPR011542 SUF system FeS cluster assembly, SufD IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR010230 FeS cluster assembly SUF system, ATPase SufC IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR029032 AhpD-like IPR003779 Carboxymuconolactone decarboxylase-like IPR006741 Accessory gene regulator B IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR029151 Periplasmic sensor-like domain superfamily IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR004872 Lipoprotein NlpA family IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain IPR018449 NIL domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR023697 Multidrug resistance protein MdtL IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR006083 Phosphoribulokinase/uridine kinase IPR026008 Uridine kinase IPR000764 Uridine kinase-like IPR020140 Uncharacterised protein family YusG IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site IPR000089 Biotin/lipoyl attachment IPR002930 Glycine cleavage system H-protein IPR033753 Glycine cleavage system H-protein/Simiate IPR017453 Glycine cleavage system H-protein, subgroup IPR011053 Single hybrid motif IPR006660 Arsenate reductase-like IPR036249 Thioredoxin-like superfamily IPR006504 Transcriptional regulator Spx/MgsR IPR006089 Acyl-CoA dehydrogenase, conserved site IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IPR036250 Acyl-CoA dehydrogenase-like, C-terminal IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily IPR002155 Thiolase IPR016039 Thiolase-like IPR020615 Thiolase, acyl-enzyme intermediate active site IPR020610 Thiolase, active site IPR020617 Thiolase, C-terminal IPR020613 Thiolase, conserved site IPR020616 Thiolase, N-terminal IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPR013328 6-phosphogluconate dehydrogenase, domain 2 IPR029045 ClpP/crotonase-like domain superfamily IPR001753 Enoyl-CoA hydratase/isomerase IPR036291 NAD(P)-binding domain superfamily IPR012851 Spore coat protein CotF-like IPR020393 Uncharacterised protein family YusU IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR004778 Homoserine/Threonine efflux protein IPR001123 Amino acid exporter protein, LeuE-type IPR010499 Bacterial transcription activator, effector binding IPR009061 Putative DNA-binding domain superfamily IPR029442 GyrI-like small molecule binding domain IPR000551 MerR-type HTH domain IPR011256 Regulatory factor, effector binding domain superfamily IPR001602 Uncharacterised protein family UPF0047 IPR035917 YjbQ-like superfamily IPR001107 Band 7 domain IPR036013 Band 7/SPFH domain superfamily IPR031905 Flotillin, C-terminal domain IPR027705 Flotillin family IPR016192 APOBEC/CMP deaminase, zinc-binding IPR002125 Cytidine and deoxycytidylate deaminase domain IPR016193 Cytidine deaminase-like IPR028883 tRNA-specific adenosine deaminase IPR007530 Aminoglycoside 6-adenylyltransferase IPR008979 Galactose-binding-like domain superfamily IPR009057 Homeobox-like domain superfamily IPR018060 DNA binding HTH domain, AraC-type IPR018117 DNA methylase, C-5 cytosine-specific, active site IPR001525 C-5 cytosine methyltransferase IPR031303 DNA methylase, C-5 cytosine-specific, conserved site IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR019059 Restriction endonuclease, type II, HaeIII IPR002941 DNA methylase N-4/N-6 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IPR040843 Restriction enzyme adenine methylase associated IPR001091 Restriction/modification DNA-methylase IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR004612 Holliday junction resolvase RecU IPR011335 Restriction endonuclease type II-like IPR011856 tRNA endonuclease-like domain superfamily IPR003593 AAA+ ATPase domain IPR002611 IstB-like ATP-binding protein IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR011009 Protein kinase-like domain superfamily IPR005543 PASTA domain IPR000719 Protein kinase domain IPR017441 Protein kinase, ATP binding site IPR008271 Serine/threonine-protein kinase, active site IPR018330 RecT family IPR004590 DNA single-strand annealing protein RecT IPR011604 Exonuclease, phage-type/RecB, C-terminal IPR017482 Putative phage-type endonuclease IPR011335 Restriction endonuclease type II-like IPR019080 YqaJ viral recombinase IPR001387 Cro/C1-type helix-turn-helix domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR016759 HTH-type transcriptional repressor RghR IPR011010 DNA breaking-rejoining enzyme, catalytic core IPR013762 Integrase-like, catalytic domain superfamily IPR002104 Integrase, catalytic domain IPR010998 Integrase/recombinase, N-terminal IPR004107 Integrase, SAM-like, N-terminal IPR023620 Small protein B IPR000037 SsrA-binding protein IPR020081 SsrA-binding protein, conserved site IPR011129 Cold shock domain IPR040476 RNase II/RNase R, cold shock domain IPR012340 Nucleic acid-binding, OB-fold IPR013223 Ribonuclease B, N-terminal OB domain IPR001900 Ribonuclease II/R IPR022966 Ribonuclease II/R, conserved site IPR004476 Ribonuclease II/ribonuclease R IPR011805 Ribonuclease R IPR022967 RNA-binding domain, S1 IPR003029 S1 domain IPR029058 Alpha/Beta hydrolase fold IPR012354 Esterase/lipase IPR022742 Serine aminopeptidase, S33 IPR004692 Preprotein translocase SecG subunit IPR000941 Enolase IPR036849 Enolase-like, C-terminal domain superfamily IPR029017 Enolase-like, N-terminal IPR020810 Enolase, C-terminal TIM barrel domain IPR020809 Enolase, conserved site IPR020811 Enolase, N-terminal IPR017850 Alkaline-phosphatase-like, core domain superfamily IPR011258 BPG-independent PGAM, N-terminal IPR006124 Metalloenzyme IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent IPR013785 Aldolase-type TIM barrel IPR035990 Triosephosphate isomerase superfamily IPR022896 Triosephosphate isomerase, bacterial/eukaryotic IPR000652 Triosephosphate isomerase IPR020861 Triosephosphate isomerase, active site IPR001576 Phosphoglycerate kinase IPR015911 Phosphoglycerate kinase, conserved site IPR015824 Phosphoglycerate kinase, N-terminal IPR036043 Phosphoglycerate kinase superfamily IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I IPR036291 NAD(P)-binding domain superfamily IPR037171 NagB/RpiA transferase-like IPR007324 Sugar-binding domain, putative IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR000394 RNA polymerase sigma factor 54 IPR007046 RNA polymerase sigma factor 54, core-binding domain IPR007634 RNA polymerase sigma factor 54, DNA-binding IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily IPR001907 ATP-dependent Clp protease proteolytic subunit IPR029045 ClpP/crotonase-like domain superfamily IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA IPR033135 ClpP, histidine active site IPR018215 ClpP, Ser active site IPR000032 Phosphocarrier protein HPr-like IPR035895 HPr-like superfamily IPR002114 Phosphotransferase system, HPr serine phosphorylation site IPR027434 Homing endonuclease IPR018478 Sporulation transcription regulator WhiA, N-terminal domain IPR003802 Sporulation regulator WhiA IPR023054 Sporulation regulator WhiA, C-terminal IPR036388 Winged helix-like DNA-binding domain superfamily IPR039518 WhiA, LAGLIDADG-like domain IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 IPR010119 Gluconeogenesis factor IPR038136 Gluconeogenesis factor superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005337 RapZ-like family IPR020476 NUDIX hydrolase IPR015797 NUDIX hydrolase-like domain superfamily IPR000086 NUDIX hydrolase domain IPR036188 FAD/NAD(P)-binding domain superfamily IPR023753 FAD/NAD(P)-binding domain IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site IPR005982 Thioredoxin reductase IPR013026 Tetratricopeptide repeat-containing domain IPR011990 Tetratricopeptide-like helical domain superfamily IPR019734 Tetratricopeptide repeat IPR036878 Glucose permease domain IIB IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site IPR003352 Phosphotransferase system, EIIC IPR013013 Phosphotransferase system, EIIC component, type 1 IPR001996 Phosphotransferase system, IIB component, type 1 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein IPR001347 Sugar isomerase (SIS) IPR009057 Homeobox-like domain superfamily IPR000281 Helix-turn-helix protein RpiR IPR035472 RpiR-like, SIS domain IPR001347 Sugar isomerase (SIS) IPR036388 Winged helix-like DNA-binding domain superfamily IPR023019 Histidine biosynthesis bifunctional protein HisIE IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase IPR026660 Phosphoribosyl-AMP cyclohydrolase IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like IPR002496 Phosphoribosyl-AMP cyclohydrolase domain IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily IPR013785 Aldolase-type TIM barrel IPR006062 Histidine biosynthesis IPR004651 Histidine biosynthesis, HisF IPR011060 Ribulose-phosphate binding barrel IPR013785 Aldolase-type TIM barrel IPR006062 Histidine biosynthesis IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase IPR011060 Ribulose-phosphate binding barrel IPR029062 Class I glutamine amidotransferase-like IPR017926 Glutamine amidotransferase IPR010139 Imidazole glycerol phosphate synthase, subunit H IPR013412 CRISPR-associated RAMP Csm3 IPR005537 CRISPR type III-associated protein IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily IPR000807 Imidazoleglycerol-phosphate dehydratase IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site IPR020568 Ribosomal protein S5 domain 2-type fold IPR016161 Aldehyde/histidinol dehydrogenase IPR001692 Histidinol dehydrogenase, conserved site IPR022695 Histidinol dehydrogenase, monofunctional IPR012131 Histidinol dehydrogenase IPR013820 ATP phosphoribosyltransferase, catalytic domain IPR018198 ATP phosphoribosyltransferase, conserved site IPR001348 ATP phosphoribosyltransferase HisG IPR024893 ATP phosphoribosyltransferase HisG, short form IPR006195 Aminoacyl-tRNA synthetase, class II IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit IPR004517 ATP phosphoribosyltransferase regulatory subunit IPR001451 Hexapeptide repeat IPR011004 Trimeric LpxA-like superfamily IPR036412 HAD-like superfamily IPR006439 HAD hydrolase, subfamily IA IPR006549 HAD-superfamily hydrolase,subfamily IIIA IPR041492 Haloacid dehalogenase-like hydrolase IPR023214 HAD superfamily IPR023198 Phosphoglycolate phosphatase-like, domain 2 IPR023733 Pyrophosphatase PpaX IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt IPR003755 HPr(Ser) kinase/phosphorylase IPR011104 HPr kinase/phosphorylase, C-terminal IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV IPR007168 Phage shock protein, PspC, N-terminal IPR025164 Putative adhesin IPR016599 Uncharacterised conserved protein UCP012569 IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR004602 UvrABC system subunit A IPR041552 UvrA DNA-binding domain IPR041102 UvrA, interaction domain IPR006935 Helicase/UvrB, N-terminal IPR014001 Helicase superfamily 1/2, ATP-binding domain IPR001650 Helicase, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR001943 UVR domain IPR036876 UVR domain superfamily IPR004807 UvrABC system, subunit B IPR041471 UvrB, interaction domain IPR024759 UvrB, YAD/RRR-motif-containing domain IPR005754 Sortase family IPR041999 Sortase D, type 1 IPR023365 Sortase domain superfamily IPR001478 PDZ domain IPR041489 PDZ domain 6 IPR036034 PDZ superfamily IPR029045 ClpP/crotonase-like domain superfamily IPR001478 PDZ domain IPR041489 PDZ domain 6 IPR036034 PDZ superfamily IPR004447 C-terminal-processing peptidase S41A IPR002477 Peptidoglycan binding-like IPR036365 PGBD-like superfamily IPR036366 PGBD superfamily IPR005151 Tail specific protease IPR011055 Duplicated hybrid motif IPR007340 Opacity-associated protein A IPR016047 Peptidase M23 IPR003838 ABC transporter permease protein domain IPR004513 Cell division protein FtsX IPR040690 FtsX, extracellular domain IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR005286 Cell division protein FtsE, ATP-binding IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR009056 Cytochrome c-like domain IPR036909 Cytochrome c-like domain superfamily IPR002324 Cytochrome c, class ID IPR019264 Domain of unknown function DUF2179 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal IPR003740 Uncharacterised membrane protein YitT IPR005139 Peptide chain release factor IPR000352 Peptide chain release factor class I IPR004374 Peptide chain release factor 2 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR004027 SEC-C motif IPR000185 Protein translocase subunit SecA IPR020937 SecA conserved site IPR011115 SecA DEAD-like, N-terminal IPR014018 SecA motor DEAD IPR011130 SecA, preprotein cross-linking domain IPR011116 SecA Wing/Scaffold IPR036266 SecA, Wing/Scaffold superfamily IPR036670 SecA, preprotein cross-linking domain superfamily IPR034694 Ribosome hibernation promoting factor, long/plastid IPR036567 Ribosome hibernation promotion factor-like IPR003489 Ribosome hibernation promoting factor/RaiA IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily IPR012156 Cold shock, CspA IPR011129 Cold shock domain IPR019844 Cold-shock (CSD) domain IPR002059 Cold-shock protein, DNA-binding IPR012340 Nucleic acid-binding, OB-fold IPR003713 Flagellar protein FliS IPR036584 Flagellar protein FliS superfamily IPR040026 Flagellar hook-associated protein 2 IPR010809 Flagellar hook-associated protein 2, C-terminal IPR003481 Flagellar hook-associated protein 2, N-terminal IPR005186 FlaG protein IPR035924 FlaG-like superfamily IPR001492 Flagellin IPR042187 Flagellin, C-terminal domain, subdomain 2 IPR001029 Flagellin, D0/D1 domain IPR003751 Translational regulator CsrA IPR036107 Carbon storage regulator superfamily IPR003775 Flagellar assembly factor FliW IPR024046 Flagellar assembly factor FliW domain superfamily IPR013384 Flagellar hook-associated protein 3 IPR001029 Flagellin, D0/D1 domain IPR001444 Flagellar basal body rod protein, N-terminal IPR019776 Flagellar basal body rod protein, conserved site IPR010930 Flagellar basal-body/hook protein, C-terminal domain IPR002371 Flagellar hook-associated protein 1 IPR022258 Flagellar operon protein YvyF IPR005222 Competence protein ComF IPR000836 Phosphoribosyltransferase domain IPR029057 Phosphoribosyltransferase-like IPR006935 Helicase/UvrB, N-terminal IPR014001 Helicase superfamily 1/2, ATP-binding domain IPR001650 Helicase, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003797 DegV IPR011006 CheY-like superfamily IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR000792 Transcription regulator LuxR, C-terminal IPR008595 Sensor DegS IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain IPR016381 Signal transduction histidine kinase, DegS IPR035647 EF-G domain III/V-like IPR023582 Impact family IPR015796 Impact family, bacterial/archaeal IPR001498 Impact, N-terminal IPR036956 Impact, N-terminal domain superfamily IPR020568 Ribosomal protein S5 domain 2-type fold IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site IPR000816 Peptidase C15, pyroglutamyl peptidase I IPR016125 Peptidase C15, pyroglutamyl peptidase I-like IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily IPR029762 Pyroglutamyl peptidase I, bacterial-type IPR033694 Pyroglutamyl peptidase I, Cys active site IPR033693 Pyroglutamyl peptidase I, Glu active site IPR010499 Bacterial transcription activator, effector binding IPR029442 GyrI-like small molecule binding domain IPR009057 Homeobox-like domain superfamily IPR018060 DNA binding HTH domain, AraC-type IPR018062 HTH domain AraC-type, conserved site IPR011256 Regulatory factor, effector binding domain superfamily IPR020449 Transcription regulator HTH, AraC- type IPR010499 Bacterial transcription activator, effector binding IPR029442 GyrI-like small molecule binding domain IPR009057 Homeobox-like domain superfamily IPR018060 DNA binding HTH domain, AraC-type IPR018062 HTH domain AraC-type, conserved site IPR011256 Regulatory factor, effector binding domain superfamily IPR020449 Transcription regulator HTH, AraC- type IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR004474 Cell envelope-related transcriptional attenuator domain IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU IPR004474 Cell envelope-related transcriptional attenuator domain IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU IPR013486 Sporulation stage II protein D, amidase enhancer LytB IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal IPR003362 Bacterial sugar transferase IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type IPR005835 Nucleotidyl transferase domain IPR029044 Nucleotide-diphospho-sugar transferases IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type IPR005835 Nucleotidyl transferase domain IPR029044 Nucleotide-diphospho-sugar transferases IPR011761 ATP-grasp fold IPR013815 ATP-grasp fold, subdomain 1 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain IPR011810 Cyanophycin synthetase IPR036565 Mur-like, catalytic domain superfamily IPR004101 Mur ligase, C-terminal IPR036615 Mur ligase, C-terminal domain superfamily IPR013221 Mur ligase, central IPR011761 ATP-grasp fold IPR003806 ATP-grasp fold, PylC-type IPR013815 ATP-grasp fold, subdomain 1 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain IPR007370 Glutamate--cysteine ligase IPR006335 Glutathione biosynthesis bifunctional protein GshAB IPR006334 Glutamate--cysteine ligase, monofunctional IPR040657 GshAB, ATP-grasp-like domain IPR011761 ATP-grasp fold IPR013815 ATP-grasp fold, subdomain 1 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain IPR007370 Glutamate--cysteine ligase IPR006335 Glutathione biosynthesis bifunctional protein GshAB IPR006334 Glutamate--cysteine ligase, monofunctional IPR040657 GshAB, ATP-grasp-like domain IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IPR001173 Glycosyltransferase 2-like IPR029044 Nucleotide-diphospho-sugar transferases IPR001173 Glycosyltransferase 2-like IPR029044 Nucleotide-diphospho-sugar transferases IPR001173 Glycosyltransferase 2-like IPR029044 Nucleotide-diphospho-sugar transferases IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR015860 ABC transporter, teichoic acids export, TagH IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR013525 ABC-2 type transporter IPR000412 ABC-2 transporter IPR001296 Glycosyl transferase, family 1 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain IPR007253 Putative cell wall binding repeat 2 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain IPR016667 Capsular polysaccharide synthesis, CpsB/CapC IPR016195 Polymerase/histidinol phosphatase-like IPR025669 AAA domain IPR005702 Exopolysaccharide synthesis protein IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR032807 Tyrosine kinase, G-rich domain IPR003856 Polysaccharide chain length determinant N-terminal domain IPR018392 LysM domain IPR036779 LysM domain superfamily IPR000064 Endopeptidase, NLPC/P60 domain IPR038765 Papain-like cysteine peptidase superfamily IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IPR003838 ABC transporter permease protein domain IPR025857 MacB-like periplasmic core domain IPR036188 FAD/NAD(P)-binding domain superfamily IPR006059 Bacterial extracellular solute-binding protein IPR006061 Solute-binding family 1, conserved site IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR013320 Concanavalin A-like lectin/glucanase domain superfamily IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain IPR006710 Glycoside hydrolase, family 43 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily IPR006938 Protein of unknown function DUF624 IPR007837 DNA damage-inducible protein DinB IPR034660 DinB/YfiT-like putative metalloenzymes IPR006059 Bacterial extracellular solute-binding protein IPR006059 Bacterial extracellular solute-binding protein IPR002729 CRISPR-associated protein Cas1 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain IPR019856 CRISPR-associated protein Cas1, DVULG subtype IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain IPR000843 LacI-type HTH domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR028082 Periplasmic binding protein-like I IPR023588 Transcription regulator HTH, PurR IPR013784 Carbohydrate-binding-like fold IPR005323 Pullulanase, carbohydrate-binding module 41 IPR006047 Glycosyl hydrolase, family 13, catalytic domain IPR004193 Glycoside hydrolase, family 13, N-terminal IPR013780 Glycosyl hydrolase, all-beta IPR017853 Glycoside hydrolase superfamily IPR013783 Immunoglobulin-like fold IPR014756 Immunoglobulin E-set IPR011840 Pullulanase, type I IPR030395 Glycerophosphodiester phosphodiesterase domain IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily IPR003593 AAA+ ATPase domain IPR001270 ClpA/B family IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal IPR022754 DNA polymerase III, gamma subunit, domain III IPR012763 DNA polymerase III, subunit gamma/ tau IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR021127 CRISPR-associated endonuclease Cas2 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 IPR013739 Beta-galactosidase C-terminal IPR013738 Beta-galactosidase trimerisation IPR029062 Class I glutamine amidotransferase-like IPR003476 Glycoside hydrolase, family 42 IPR013529 Glycoside hydrolase, family 42, N-terminal IPR013780 Glycosyl hydrolase, all-beta IPR017853 Glycoside hydrolase superfamily IPR006829 LXG domain IPR040702 Response regulator aspartate phosphatase, N-terminal IPR013026 Tetratricopeptide repeat-containing domain IPR011990 Tetratricopeptide-like helical domain superfamily IPR019734 Tetratricopeptide repeat IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPR036291 NAD(P)-binding domain superfamily IPR017476 UDP-glucose/GDP-mannose dehydrogenase IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal IPR028357 UDP-glucose 6-dehydrogenase, bacterial type IPR001509 NAD-dependent epimerase/dehydratase IPR036291 NAD(P)-binding domain superfamily IPR001296 Glycosyl transferase, family 1 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain IPR001173 Glycosyltransferase 2-like IPR029044 Nucleotide-diphospho-sugar transferases IPR001173 Glycosyltransferase 2-like IPR029044 Nucleotide-diphospho-sugar transferases IPR003362 Bacterial sugar transferase IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ IPR036291 NAD(P)-binding domain superfamily IPR003869 Polysaccharide biosynthesis protein, CapD-like domain IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR039052 Antitoxin PemI-like IPR007159 SpoVT-AbrB domain IPR037914 SpoVT-AbrB domain superfamily IPR003477 mRNA interferase PemK-like IPR011067 Plasmid maintenance toxin/Cell growth inhibitor IPR000887 KDPG/KHG aldolase IPR013785 Aldolase-type TIM barrel IPR002173 Carbohydrate/puine kinase, PfkB, conserved site IPR011611 Carbohydrate kinase PfkB IPR029056 Ribokinase-like IPR000843 LacI-type HTH domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR028082 Periplasmic binding protein-like I IPR002173 Carbohydrate/puine kinase, PfkB, conserved site IPR011877 Ribokinase IPR011611 Carbohydrate kinase PfkB IPR002139 Ribokinase/fructokinase IPR029056 Ribokinase-like IPR023064 D-ribose pyranase IPR023750 RbsD-like superfamily IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR015861 ABC transporter, ribose import, RbsA IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR028082 Periplasmic binding protein-like I IPR025997 Periplasmic binding protein IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ IPR029069 HotDog domain superfamily IPR001444 Flagellar basal body rod protein, N-terminal IPR019776 Flagellar basal body rod protein, conserved site IPR020013 Flagellar hook-basal body protein, FlgE/F/G IPR010930 Flagellar basal-body/hook protein, C-terminal domain IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like IPR001444 Flagellar basal body rod protein, N-terminal IPR019776 Flagellar basal body rod protein, conserved site IPR010930 Flagellar basal-body/hook protein, C-terminal domain IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like IPR004753 Cell shape determining protein MreB IPR014208 Sporulation stage III, transcriptional regulator SpoIIID IPR018356 Transcription regulator, HTH DeoR-type, conserved site IPR000644 CBS domain IPR038763 DHH phosphoesterase superfamily IPR002646 Poly A polymerase, head domain IPR038377 Sodium/glucose symporter superfamily IPR001734 Sodium/solute symporter IPR019899 Sodium/solute symporter, VC2705 subfamily IPR011055 Duplicated hybrid motif IPR016047 Peptidase M23 IPR013486 Sporulation stage II protein D, amidase enhancer LytB IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal IPR014225 Sporulation stage II, protein D firmicutes IPR001986 Enolpyruvate transferase domain IPR036968 Enolpyruvate transferase domain superfamily IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase IPR009526 Protein of unknown function DUF1146 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily IPR001469 ATP synthase, F1 complex, delta/epsilon subunit IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal IPR003593 AAA+ ATPase domain IPR005722 ATP synthase, F1 complex, beta subunit IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR035968 ATP synthase, F1 complex, gamma subunit superfamily IPR000131 ATP synthase, F1 complex, gamma subunit IPR023632 ATP synthase, F1 complex, gamma subunit conserved site IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily IPR000793 ATP synthase, alpha subunit, C-terminal IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain IPR005294 ATP synthase, F1 complex, alpha subunit IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily IPR020781 ATPase, OSCP/delta subunit, conserved site IPR000711 ATPase, OSCP/delta subunit IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast IPR005864 ATP synthase, F0 complex, subunit b, bacterial IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast IPR000454 ATP synthase, F0 complex, subunit C IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site IPR038662 F1F0 ATP synthase subunit C superfamily IPR002379 V-ATPase proteolipid subunit C-like domain IPR035921 F/V-ATP synthase subunit C superfamily IPR000568 ATP synthase, F0 complex, subunit A IPR023011 ATP synthase, F0 complex, subunit A, active site IPR035908 ATP synthase, F0 complex, subunit A superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR005598 ATP synthase protein I IPR016989 ATP synthase protein I, alphaproteobacterial IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter IPR025965 FlgD Ig-like domain IPR003137 PA domain IPR000209 Peptidase S8/S53 domain IPR036852 Peptidase S8/S53 domain superfamily IPR023827 Peptidase S8, subtilisin, Asp-active site IPR022398 Peptidase S8, subtilisin, His-active site IPR023828 Peptidase S8, subtilisin, Ser-active site IPR015500 Peptidase S8, subtilisin-related IPR034213 Vpr-like peptidase, catalytic domain IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily IPR025965 FlgD Ig-like domain IPR003137 PA domain IPR000209 Peptidase S8/S53 domain IPR036852 Peptidase S8/S53 domain superfamily IPR023827 Peptidase S8, subtilisin, Asp-active site IPR022398 Peptidase S8, subtilisin, His-active site IPR023828 Peptidase S8, subtilisin, Ser-active site IPR015500 Peptidase S8, subtilisin-related IPR034213 Vpr-like peptidase, catalytic domain IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily IPR000836 Phosphoribosyltransferase domain IPR029057 Phosphoribosyltransferase-like IPR034332 Uracil phosphoribosyltransferase, bacterial-type IPR005765 Uracil phosphoribosyl transferase IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR001085 Serine hydroxymethyltransferase IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site IPR039429 Serine hydroxymethyltransferase-like domain IPR028345 Aminoglycoside 3-N-acetyltransferase-like IPR006340 Protein of unknown function DUF436 IPR004785 Ribose 5-phosphate isomerase B IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily IPR004090 Chemotaxis methyl-accepting receptor IPR003660 HAMP domain IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR023485 Phosphotyrosine protein phosphatase I IPR036196 Phosphotyrosine protein phosphatase I superfamily IPR017867 Protein-tyrosine phosphatase, low molecular weight IPR003810 Putative manganese efflux pump IPR022929 Putative manganese efflux pump MntP IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR025966 Oligopeptide transport permease C-like, N-terminal domain IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily IPR005145 Putative GTP-binding controlling metal-binding domain IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 IPR006070 YrdC-like domain IPR014202 Sporulation stage II, protein R IPR002052 DNA methylase, N-6 adenine-specific, conserved site IPR004556 Methyltransferase HemK-like IPR025714 Methyltransferase domain IPR040758 Release factor glutamine methyltransferase, N-terminal domain IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR005139 Peptide chain release factor IPR000352 Peptide chain release factor class I IPR004373 Peptide chain release factor 1 IPR017758 Coenzyme A disulphide reductase IPR023536 Coenzyme A disulphide reductase, staphyolococci IPR036188 FAD/NAD(P)-binding domain superfamily IPR023753 FAD/NAD(P)-binding domain IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IPR000868 Isochorismatase-like IPR036380 Isochorismatase-like superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR001267 Thymidine kinase IPR020633 Thymidine kinase, conserved site IPR034704 L28p-like IPR002150 Ribosomal protein L31 IPR027493 Ribosomal protein L31 type B IPR042105 Ribosomal protein L31 superfamily IPR003593 AAA+ ATPase domain IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IPR011129 Cold shock domain IPR012340 Nucleic acid-binding, OB-fold IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR041703 Transcription termination factor Rho, ATP binding domain IPR011112 Rho termination factor, N-terminal IPR036269 Rho termination factor, N-terminal domain superfamily IPR011113 Rho termination factor, RNA-binding domain IPR004665 Transcription termination factor Rho IPR001986 Enolpyruvate transferase domain IPR036968 Enolpyruvate transferase domain superfamily IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase IPR013785 Aldolase-type TIM barrel IPR001585 Transaldolase/Fructose-6-phosphate aldolase IPR022999 Transaldolase type 3B, putative IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase IPR018225 Transaldolase, active site IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial IPR013785 Aldolase-type TIM barrel IPR000771 Fructose-bisphosphate aldolase, class-II IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 IPR011006 CheY-like superfamily IPR001789 Signal transduction response regulator, receiver domain IPR037294 ABC transporter, BtuC-like IPR000522 ABC transporter, permease protein, BtuC-like IPR037294 ABC transporter, BtuC-like IPR000522 ABC transporter, permease protein, BtuC-like IPR002491 ABC transporter periplasmic binding domain IPR029062 Class I glutamine amidotransferase-like IPR004468 CTP synthase IPR017456 CTP synthase, N-terminal IPR017926 Glutamine amidotransferase IPR033828 CTP synthase GATase domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR007759 HB1/Asxl, restriction endonuclease HTH domain IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily IPR029757 DNA-directed RNA polymerase subunit delta IPR021812 Protein of unknown function DUF3391 IPR003607 HD/PDEase domain IPR006674 HD domain IPR037522 HD-GYP domain IPR006675 HDIG domain IPR006159 Methylmalonyl-CoA mutase, C-terminal IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic IPR006158 Cobalamin (vitamin B12)-binding domain IPR036724 Cobalamin-binding domain superfamily IPR033669 Fused isobutyryl-CoA mutase IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR006089 Acyl-CoA dehydrogenase, conserved site IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IPR036250 Acyl-CoA dehydrogenase-like, C-terminal IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily IPR006089 Acyl-CoA dehydrogenase, conserved site IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IPR036250 Acyl-CoA dehydrogenase-like, C-terminal IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily IPR022694 3-hydroxyacyl-CoA dehydrogenase IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPR013328 6-phosphogluconate dehydrogenase, domain 2 IPR036291 NAD(P)-binding domain superfamily IPR036894 Nucleoid-associated protein YbaB-like domain superfamily IPR004401 Nucleoid-associated protein YbaB/EbfC family IPR002155 Thiolase IPR016039 Thiolase-like IPR020615 Thiolase, acyl-enzyme intermediate active site IPR020610 Thiolase, active site IPR020617 Thiolase, C-terminal IPR020613 Thiolase, conserved site IPR020616 Thiolase, N-terminal IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IPR004017 Cysteine-rich domain IPR009051 Alpha-helical ferredoxin IPR036197 NarG-like superfamily IPR022924 Cardiolipin synthase IPR025202 Phospholipase D-like domain IPR001736 Phospholipase D/Transphosphatidylase IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR029058 Alpha/Beta hydrolase fold IPR000073 Alpha/beta hydrolase fold-1 IPR000639 Epoxide hydrolase-like IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal IPR007403 Protein of unknown function DUF456 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPR001278 Arginine-tRNA ligase IPR005148 Arginyl tRNA synthetase N-terminal domain IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily IPR035684 Arginyl-tRNA synthetase, catalytic core domain IPR008909 DALR anticodon binding IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IPR005925 Agmatinase-related IPR006035 Ureohydrolase IPR023696 Ureohydrolase domain superfamily IPR020855 Ureohydrolase, manganese-binding site IPR009057 Homeobox-like domain superfamily IPR001647 DNA-binding HTH domain, TetR-type IPR041490 HTH-type transcriptional repressor KstR2, C-terminal IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IPR030374 Polyamine biosynthesis domain IPR030373 Polyamine biosynthesis domain, conserved site IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR001045 Spermidine/spermine synthases IPR035246 Spermidine synthase, tetramerisation domain IPR037163 Spermidine synthase, tetramerisation domain superfamily IPR012338 Beta-lactamase/transpeptidase-like IPR001264 Glycosyl transferase, family 51 IPR023346 Lysozyme-like domain superfamily IPR036950 Penicillin binding protein transglycosylase domain IPR001460 Penicillin-binding protein, transpeptidase IPR014852 Uncharacterised protein YwhD IPR004370 4-oxalocrotonate tautomerase IPR014347 Tautomerase/MIF superfamily IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IPR001036 Acriflavin resistance protein IPR003607 HD/PDEase domain IPR006674 HD domain IPR003607 HD/PDEase domain IPR006674 HD domain IPR002022 Pectate lyase IPR012334 Pectin lyase fold IPR011050 Pectin lyase fold/virulence factor IPR033380 Glutamate-aspartate symport protein GltP/GltT IPR001991 Sodium:dicarboxylate symporter IPR018107 Sodium:dicarboxylate symporter, conserved site IPR036458 Sodium:dicarboxylate symporter superfamily IPR009910 Protein of unknown function DUF1450 IPR020880 Protein of unknown function UPF0741 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain IPR024897 Octanoyltransferase LipL IPR012147 Phosphate acetyl/butyryltransferase IPR004614 Phosphate acetyltransferase IPR042113 Phosphate acetyltransferase, domain 1 IPR042112 Phosphate acetyltransferase, domain 2 IPR002505 Phosphate acetyl/butaryl transferase IPR031332 Putative heme-dependent peroxidase, UPF0447 family IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase IPR011008 Dimeric alpha-beta barrel IPR011105 Cell wall hydrolase, SleB IPR042047 Cell wall hydrolase SleB, domain 1 IPR014099 Spore coat protein GerQ IPR006696 Protein of unknown function DUF423 IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR006054 DNA polymerase III epsilon subunit, exonuclease domain IPR006309 DNA polymerase 3, epsilon subunit IPR013520 Exonuclease, RNase T/DNA polymerase III IPR012337 Ribonuclease H-like superfamily IPR036397 Ribonuclease H superfamily IPR029020 Ammonium/urea transporter IPR001905 Ammonium transporter IPR018047 Ammonium transporter, conserved site IPR024041 Ammonium transporter AmtB-like domain IPR036250 Acyl-CoA dehydrogenase-like, C-terminal IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily IPR004925 HpaB/PvcC/4-BUDH IPR024719 HpaB/PvcC/4-BUDH C-terminal IPR024674 HpaB/PvcC/4-BUDH N-terminal IPR012687 4-HPA 3-monooxygenase large component, Deinococcus-type IPR011006 CheY-like superfamily IPR024187 Signal transduction response regulator, citrate/malate metabolism IPR001789 Signal transduction response regulator, receiver domain IPR028141 Transcriptional regulator IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR000014 PAS domain IPR035965 PAS domain superfamily IPR013767 PAS fold IPR033463 Single cache domain 3 IPR029151 Periplasmic sensor-like domain superfamily IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB IPR039506 SpoOB, alpha-helical domain IPR028082 Periplasmic binding protein-like I IPR025997 Periplasmic binding protein IPR004104 Oxidoreductase, C-terminal IPR036291 NAD(P)-binding domain superfamily IPR000683 Oxidoreductase, N-terminal IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR002043 Uracil-DNA glycosylase family 1 IPR018085 Uracil-DNA glycosylase, active site IPR005122 Uracil-DNA glycosylase-like IPR036895 Uracil-DNA glycosylase-like domain superfamily IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPR013328 6-phosphogluconate dehydrogenase, domain 2 IPR023028 Mannitol-1-phosphate 5-dehydrogenase IPR000669 Mannitol dehydrogenase IPR013118 Mannitol dehydrogenase, C-terminal IPR013131 Mannitol dehydrogenase, N-terminal IPR036291 NAD(P)-binding domain superfamily IPR016152 Phosphotransferase/anion transporter IPR002178 PTS EIIA type-2 domain IPR013196 Helix-turn-helix, type 11 IPR007737 Mga helix-turn-helix domain IPR011608 PRD domain IPR036634 PRD domain superfamily IPR016152 Phosphotransferase/anion transporter IPR002178 PTS EIIA type-2 domain IPR036095 PTS system IIB component-like superfamily IPR013011 Phosphotransferase system, EIIB component, type 2 IPR003501 Phosphotransferase system, EIIB component, type 2/3 IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR036095 PTS system IIB component-like superfamily IPR013011 Phosphotransferase system, EIIB component, type 2 IPR003501 Phosphotransferase system, EIIB component, type 2/3 IPR029503 Phosphotransferase system EIIB component, mannitol-specific IPR003352 Phosphotransferase system, EIIC IPR013014 Phosphotransferase system, EIIC component, type 2 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC IPR029479 Nitroreductase IPR000415 Nitroreductase-like IPR003680 Flavodoxin-like fold IPR029039 Flavoprotein-like superfamily IPR023048 NADH-azoreductase, FMN-dependent IPR006161 Conserved hypothetical protein CHP00336 IPR006160 Short chain fatty acid transporter AtoE IPR003137 PA domain IPR007484 Peptidase M28 IPR004090 Chemotaxis methyl-accepting receptor IPR003660 HAMP domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR010976 Beta-phosphoglucomutase hydrolase IPR010972 Beta-phosphoglucomutase IPR036412 HAD-like superfamily IPR006439 HAD hydrolase, subfamily IA IPR041492 Haloacid dehalogenase-like hydrolase IPR023214 HAD superfamily IPR023198 Phosphoglycolate phosphatase-like, domain 2 IPR000620 EamA domain IPR004626 RarD protein IPR008147 Glutamine synthetase, beta-Grasp domain IPR036651 Glutamine synthetase, N-terminal domain superfamily IPR014746 Glutamine synthetase/guanido kinase, catalytic domain IPR008146 Glutamine synthetase, catalytic domain IPR027303 Glutamine synthetase, glycine-rich site IPR004809 Glutamine synthetase type I IPR027302 Glutamine synthetase, N-terminal conserved site IPR006047 Glycosyl hydrolase, family 13, catalytic domain IPR013780 Glycosyl hydrolase, all-beta IPR017853 Glycoside hydrolase superfamily IPR032091 Maltogenic Amylase, C-terminal IPR018745 Domain of unknown function DUF2294 IPR006076 FAD dependent oxidoreductase IPR036188 FAD/NAD(P)-binding domain superfamily IPR017941 Rieske [2Fe-2S] iron-sulphur domain IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily IPR005805 Rieske iron-sulphur protein, C-terminal IPR038010 YhfW, C-terminal Rieske domain IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IPR037523 Vicinal oxygen chelate (VOC) domain IPR029035 DHS-like NAD/FAD-binding domain superfamily IPR014092 Pyruvate oxidase IPR029061 Thiamin diphosphate-binding fold IPR012000 Thiamine pyrophosphate enzyme, central domain IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain IPR000399 TPP-binding enzyme, conserved site IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding IPR029756 MTH1187/YkoF-like IPR002767 Thiamine-binding protein IPR036264 Bacterial exopeptidase dimerisation domain IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria IPR002933 Peptidase M20 IPR011650 Peptidase M20, dimerisation domain IPR014957 IDEAL domain IPR011188 Uncharacterised protein family UPF0302 IPR014963 Uncharacterised domain UPF0302, N-terminal IPR038091 UPF0302, N-terminal domain superfamily IPR027393 Virus scaffolding protein, C-terminal IPR011991 ArsR-like helix-turn-helix domain IPR000485 AsnC-type HTH domain IPR011008 Dimeric alpha-beta barrel IPR019888 Transcription regulator AsnC-type IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IPR019885 Transcription regulator HTH, AsnC-type, conserved site IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR041891 Carbonic anhydrase, prokaryotic-like IPR001148 Alpha carbonic anhydrase domain IPR036398 Alpha carbonic anhydrase domain superfamily IPR023561 Carbonic anhydrase, alpha-class IPR018338 Carbonic anhydrase, alpha-class, conserved site IPR007138 Antibiotic biosynthesis monooxygenase domain IPR011008 Dimeric alpha-beta barrel IPR002577 Helix-turn-helix, HxlR type IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR003680 Flavodoxin-like fold IPR029039 Flavoprotein-like superfamily IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG IPR012851 Spore coat protein CotF-like IPR013549 Domain of unknown function DUF1731 IPR001509 NAD-dependent epimerase/dehydratase IPR036291 NAD(P)-binding domain superfamily IPR010099 Epimerase family protein SDR39U1 IPR003593 AAA+ ATPase domain IPR011527 ABC transporter type 1, transmembrane domain IPR036640 ABC transporter type 1, transmembrane domain superfamily IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR039421 Type I protein exporter IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR015851 ABC transporter, NodI IPR005978 Nodulation ABC transporter, NodI IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR000060 BCCT transporter family IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase IPR036291 NAD(P)-binding domain superfamily IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR002347 Short-chain dehydrogenase/reductase SDR IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase IPR036291 NAD(P)-binding domain superfamily IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR002347 Short-chain dehydrogenase/reductase SDR IPR003474 Gluconate transporter IPR014388 3-oxoacid CoA-transferase IPR004165 Coenzyme A transferase family I IPR037171 NagB/RpiA transferase-like IPR033479 Double Cache domain 1 IPR003660 HAMP domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR029151 Periplasmic sensor-like domain superfamily IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding IPR033479 Double Cache domain 1 IPR003660 HAMP domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR029151 Periplasmic sensor-like domain superfamily IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding IPR033479 Double Cache domain 1 IPR003660 HAMP domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR029151 Periplasmic sensor-like domain superfamily IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding IPR007169 Extracellular matrix regulatory protein A IPR000093 DNA recombination protein RecR IPR023627 Recombination protein RecR IPR023628 Recombination protein RecR, C4-type zinc finger IPR015967 Recombination protein RecR, conserved site IPR006171 TOPRIM domain IPR034137 RecR, TOPRIM domain IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel IPR002509 NodB homology domain IPR003369 Sec-independent protein translocase protein TatA/B/E IPR006312 Sec-independent protein translocase protein TatA/E IPR019820 Sec-independent periplasmic protein translocase, conserved site IPR002033 Sec-independent periplasmic protein translocase TatC IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site IPR004839 Aminotransferase, class I/classII IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR029058 Alpha/Beta hydrolase fold IPR000073 Alpha/beta hydrolase fold-1 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR013149 Alcohol dehydrogenase, C-terminal IPR013154 Alcohol dehydrogenase, N-terminal IPR011032 GroES-like superfamily IPR036291 NAD(P)-binding domain superfamily IPR020843 Polyketide synthase, enoylreductase domain IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site IPR011006 CheY-like superfamily IPR001867 OmpR/PhoB-type DNA-binding domain IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR039420 Transcriptional regulatory protein WalR-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR033479 Double Cache domain 1 IPR003660 HAMP domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR029151 Periplasmic sensor-like domain superfamily IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding IPR001250 Mannose-6-phosphate isomerase, type I IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form IPR014710 RmlC-like jelly roll fold IPR011051 RmlC-like cupin domain superfamily IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IPR000524 Transcription regulator HTH, GntR IPR011663 UbiC transcription regulator-associated IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR001360 Glycoside hydrolase family 1 IPR018120 Glycoside hydrolase family 1, active site IPR017853 Glycoside hydrolase superfamily IPR003352 Phosphotransferase system, EIIC IPR004501 Phosphotransferase system, EIIC component, type 3 IPR004796 Phosphotransferase system, cellobiose-type IIC component IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily IPR001387 Cro/C1-type helix-turn-helix domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR036095 PTS system IIB component-like superfamily IPR003501 Phosphotransferase system, EIIB component, type 2/3 IPR013012 Phosphotransferase system, EIIB component, type 3 IPR039556 ICL/PEPM domain IPR018523 Isocitrate lyase/phosphorylmutase, conserved site IPR012695 2-methylisocitrate lyase IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IPR040442 Pyruvate kinase-like domain superfamily IPR012705 2-methylcitrate dehydratase PrpD IPR036148 MmgE/PrpD superfamily IPR042183 MmgE/PrpD superfamily, domain 1 IPR042188 MmgE/PrpD superfamily, domain 2 IPR005656 MmgE/PrpD IPR016142 Citrate synthase-like, large alpha subdomain IPR016143 Citrate synthase-like, small alpha subdomain IPR002020 Citrate synthase IPR019810 Citrate synthase active site IPR024176 Citrate synthase, bacterial-type IPR036969 Citrate synthase superfamily IPR005119 LysR, substrate-binding IPR000847 Transcription regulator HTH, LysR IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR001463 Sodium:alanine symporter IPR001463 Sodium:alanine symporter IPR020471 Aldo/keto reductase IPR023210 NADP-dependent oxidoreductase domain IPR036812 NADP-dependent oxidoreductase domain superfamily IPR022390 4-hydroxybenzoate decarboxylase subunit C IPR002830 UbiD decarboxylyase family IPR003804 L-lactate permease IPR001557 L-lactate/malate dehydrogenase IPR011304 L-lactate dehydrogenase IPR018177 L-lactate dehydrogenase, active site IPR022383 Lactate/malate dehydrogenase, C-terminal IPR001236 Lactate/malate dehydrogenase, N-terminal IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal IPR036291 NAD(P)-binding domain superfamily IPR003846 Protein adenylyltransferase SelO IPR016161 Aldehyde/histidinol dehydrogenase IPR016163 Aldehyde dehydrogenase, C-terminal IPR016160 Aldehyde dehydrogenase, cysteine active site IPR029510 Aldehyde dehydrogenase, glutamic acid active site IPR016162 Aldehyde dehydrogenase, N-terminal IPR015590 Aldehyde dehydrogenase domain IPR005932 1-pyrroline-5-carboxylate dehydrogenase IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal IPR036627 CobW-like, C-terminal domain superfamily IPR003495 CobW/HypB/UreG, nucleotide-binding domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase IPR033524 Leu/Phe/Val dehydrogenases active site IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain IPR014362 Glutamate dehydrogenase IPR036291 NAD(P)-binding domain superfamily IPR033922 NAD(P) binding domain of glutamate dehydrogenase IPR005814 Aminotransferase class-III IPR010164 Ornithine aminotransferase IPR034757 Ornithine aminotransferase, bacterial type IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR003593 AAA+ ATPase domain IPR009057 Homeobox-like domain superfamily IPR002197 DNA binding HTH domain, Fis-type IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR000014 PAS domain IPR035965 PAS domain superfamily IPR002078 RNA polymerase sigma factor 54 interaction domain IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IPR025944 Sigma-54 interaction domain, conserved site IPR004770 Na+/H+ antiporter NhaC IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal IPR013149 Alcohol dehydrogenase, C-terminal IPR013154 Alcohol dehydrogenase, N-terminal IPR002328 Alcohol dehydrogenase, zinc-type, conserved site IPR011032 GroES-like superfamily IPR036291 NAD(P)-binding domain superfamily IPR020843 Polyketide synthase, enoylreductase domain IPR036249 Thioredoxin-like superfamily IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD IPR030390 RNA methyltransferase TrmA, active site IPR030391 RNA methyltransferase TrmA, conserved site IPR012340 Nucleic acid-binding, OB-fold IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR002792 TRAM domain IPR010280 (Uracil-5)-methyltransferase family IPR036291 NAD(P)-binding domain superfamily IPR032095 Saccharopine dehydrogenase, C-terminal IPR005097 Saccharopine dehydrogenase, NADP binding domain IPR009006 Alanine racemase/group IV decarboxylase, C-terminal IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal IPR005730 Carboxynorspermidine decarboxylase IPR029066 PLP-binding barrel IPR036188 FAD/NAD(P)-binding domain superfamily IPR006231 Malate:quinone-oxidoreductase IPR011962 dCTP deaminase IPR029054 dUTPase-like IPR036157 dUTPase-like superfamily IPR033704 dUTPase, trimeric IPR001279 Metallo-beta-lactamase IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPR022877 Protein of unknown funcion UPF0173 IPR001087 GDSL lipase/esterase IPR037459 Rhamnogalacturonan acetylesterase RhgT-like IPR036514 SGNH hydrolase superfamily IPR000989 Replication protein IPR009057 Homeobox-like domain superfamily IPR017894 HTH domain, IS21 transposase-type IPR001584 Integrase, catalytic core IPR012337 Ribonuclease H-like superfamily IPR003593 AAA+ ATPase domain IPR001270 ClpA/B family IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein IPR002611 IstB-like ATP-binding protein IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria IPR003593 AAA+ ATPase domain IPR011527 ABC transporter type 1, transmembrane domain IPR036640 ABC transporter type 1, transmembrane domain superfamily IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR039421 Type I protein exporter IPR003593 AAA+ ATPase domain IPR011527 ABC transporter type 1, transmembrane domain IPR036640 ABC transporter type 1, transmembrane domain superfamily IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003317 Cytochrome ubiquinol oxidase subunit 2 IPR003317 Cytochrome ubiquinol oxidase subunit 2 IPR002585 Cytochrome ubiquinol oxidase subunit 1 IPR002585 Cytochrome ubiquinol oxidase subunit 1 IPR013525 ABC-2 type transporter IPR000412 ABC-2 transporter IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA IPR025302 Domain of unknown function DUF4162 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR040678 AbrB, C-terminal IPR007159 SpoVT-AbrB domain IPR037914 SpoVT-AbrB domain superfamily IPR040678 AbrB, C-terminal IPR007159 SpoVT-AbrB domain IPR037914 SpoVT-AbrB domain superfamily IPR002563 Flavin reductase like domain IPR012349 FMN-binding split barrel IPR002563 Flavin reductase like domain IPR012349 FMN-binding split barrel IPR003593 AAA+ ATPase domain IPR001270 ClpA/B family IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein IPR002611 IstB-like ATP-binding protein IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein IPR002611 IstB-like ATP-binding protein IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR011006 CheY-like superfamily IPR001867 OmpR/PhoB-type DNA-binding domain IPR001789 Signal transduction response regulator, receiver domain IPR039420 Transcriptional regulatory protein WalR-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR012186 Adenine modification methylase, M.StsI-type IPR023095 Adenine-specific methyltransferase, domain 2 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IPR012327 D12 class N6 adenine-specific DNA methyltransferase IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR012186 Adenine modification methylase, M.StsI-type IPR023095 Adenine-specific methyltransferase, domain 2 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IPR012327 D12 class N6 adenine-specific DNA methyltransferase IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR029028 Alpha/beta knot methyltransferases IPR003742 RNA methyltransferase RlmH IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IPR003660 HAMP domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR040702 Response regulator aspartate phosphatase, N-terminal IPR013026 Tetratricopeptide repeat-containing domain IPR011990 Tetratricopeptide-like helical domain superfamily IPR019734 Tetratricopeptide repeat IPR040702 Response regulator aspartate phosphatase, N-terminal IPR013026 Tetratricopeptide repeat-containing domain IPR011990 Tetratricopeptide-like helical domain superfamily IPR019734 Tetratricopeptide repeat IPR025711 PepSY domain IPR025711 PepSY domain IPR001478 PDZ domain IPR036034 PDZ superfamily IPR009003 Peptidase S1, PA clan IPR001940 Peptidase S1C IPR001279 Metallo-beta-lactamase IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPR042274 Regulatory protein YycH/YycI , domain 2 IPR018604 Regulatory protein YycH-like IPR009996 Regulatory protein YycH IPR042274 Regulatory protein YycH/YycI , domain 2 IPR003660 HAMP domain IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR001610 PAC motif IPR000014 PAS domain IPR000700 PAS-associated, C-terminal IPR035965 PAS domain superfamily IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR011006 CheY-like superfamily IPR001867 OmpR/PhoB-type DNA-binding domain IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR039420 Transcriptional regulatory protein WalR-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR018220 Adenylosuccinate synthase, GTP-binding site IPR033128 Adenylosuccinate synthase, active site IPR042109 Adenylosuccinate synthetase, domain 1 IPR042110 Adenylosuccinate synthetase, domain 2 IPR042111 Adenylosuccinate synthetase, domain 3 IPR001114 Adenylosuccinate synthetase IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003593 AAA+ ATPase domain IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily IPR007692 DNA helicase, DnaB type IPR007694 DNA helicase, DnaB-like, C-terminal IPR007693 DNA helicase, DnaB-like, N-terminal IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR000244 Ribosomal protein L9 IPR009027 Ribosomal protein L9/RNase H1, N-terminal IPR020594 Ribosomal protein L9, bacteria/chloroplast IPR020069 Ribosomal protein L9, C-terminal IPR036791 Ribosomal protein L9, C-terminal domain superfamily IPR020070 Ribosomal protein L9, N-terminal IPR036935 Ribosomal protein L9, N-terminal domain superfamily IPR001667 DDH domain IPR038763 DHH phosphoesterase superfamily IPR003156 DHHA1 domain IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA IPR000160 GGDEF domain IPR018710 Protein of unknown function DUF2232 IPR000432 DNA mismatch repair protein MutS, C-terminal IPR007696 DNA mismatch repair protein MutS, core IPR036187 DNA mismatch repair protein MutS, core domain superfamily IPR005747 Endonuclease MutS2 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR002625 Smr domain IPR036063 Smr domain superfamily IPR023299 P-type ATPase, cytoplasmic domain N IPR018303 P-type ATPase, phosphorylation site IPR023298 P-type ATPase, transmembrane domain superfamily IPR008250 P-type ATPase, A domain superfamily IPR036412 HAD-like superfamily IPR023214 HAD superfamily IPR017969 Heavy-metal-associated, conserved site IPR006121 Heavy metal-associated domain, HMA IPR036163 Heavy metal-associated domain superfamily IPR027256 P-type ATPase, subfamily IB IPR001757 P-type ATPase IPR011991 ArsR-like helix-turn-helix domain IPR018334 ArsR-type transcription regulator, HTH motif IPR001845 HTH ArsR-type DNA-binding domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR006153 Cation/H+ exchanger IPR036318 FAD-binding, type PCMH-like superfamily IPR016169 FAD-binding, type PCMH, subdomain 2 IPR038770 Sodium/solute symporter superfamily IPR030151 K(+)/H(+) antiporter NhaP IPR023729 K(+)/H(+) antiporter NhaP2 IPR006037 Regulator of K+ conductance, C-terminal IPR036721 Regulator of K+ conductance, C-terminal domain superfamily IPR005170 Transporter-associated domain IPR011010 DNA breaking-rejoining enzyme, catalytic core IPR013762 Integrase-like, catalytic domain superfamily IPR002104 Integrase, catalytic domain IPR003680 Flavodoxin-like fold IPR029039 Flavoprotein-like superfamily IPR023048 NADH-azoreductase, FMN-dependent IPR009061 Putative DNA-binding domain superfamily IPR029442 GyrI-like small molecule binding domain IPR000551 MerR-type HTH domain IPR011256 Regulatory factor, effector binding domain superfamily IPR009061 Putative DNA-binding domain superfamily IPR029442 GyrI-like small molecule binding domain IPR000551 MerR-type HTH domain IPR011256 Regulatory factor, effector binding domain superfamily IPR001648 Ribosomal protein S18 IPR018275 Ribosomal protein S18, conserved site IPR036870 Ribosomal protein S18 superfamily IPR012340 Nucleic acid-binding, OB-fold IPR000424 Primosome PriB/single-strand DNA-binding IPR011344 Single-stranded DNA-binding protein IPR000529 Ribosomal protein S6 IPR020815 Ribosomal protein S6, conserved site IPR020814 Ribosomal protein S6, plastid/chloroplast IPR035980 Ribosomal protein S6 superfamily IPR014717 Translation elongation factor EF1B/ribosomal protein S6 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 IPR012675 Beta-grasp domain superfamily IPR031167 OBG-type guanine nucleotide-binding (G) domain IPR006073 GTP binding domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR004095 TGS IPR012676 TGS-like IPR023192 TGS-like domain superfamily IPR013029 YchF, C-terminal domain IPR041706 YchF, N-terminal IPR009296 Protein of unknown function DUF951 IPR038728 Uncharacterized membrane protein YkvI IPR009665 Protein of unknown function DUF1256 IPR023430 Peptidase HybD-like domain superfamily IPR007563 Protein of unknown function DUF554 IPR000192 Aminotransferase class V domain IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IPR010240 Cysteine desulfurase IscS IPR016454 Cysteine desulfurase IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR041468 ParB/Spo0J, HTH domain IPR004437 ParB/RepB/Spo0J partition protein IPR003115 ParB/Sulfiredoxin IPR036086 ParB/Sulfiredoxin superfamily IPR025669 AAA domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR041468 ParB/Spo0J, HTH domain IPR023705 Nucleoid occlusion protein IPR004437 ParB/RepB/Spo0J partition protein IPR003115 ParB/Sulfiredoxin IPR036086 ParB/Sulfiredoxin superfamily IPR003682 rRNA small subunit methyltransferase G IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR036188 FAD/NAD(P)-binding domain superfamily IPR026904 GidA associated domain 3 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related IPR020595 MnmG-related, conserved site IPR031168 TrmE-type guanine nucleotide-binding domain IPR018948 GTP-binding protein TrmE, N-terminal IPR006073 GTP binding domain IPR004520 tRNA modification GTPase MnmE IPR027368 tRNA modification GTPase MnmE domain 2 IPR025867 MnmE, helical domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005225 Small GTP-binding protein domain IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 IPR039247 Jag protein IPR038008 Jag, KH domain IPR032782 Jag, N-terminal IPR038247 Jag, N-terminal domain superfamily IPR015946 K homology domain-like, alpha/beta IPR001374 R3H domain IPR036867 R3H domain superfamily IPR034079 Jag, R3H domain IPR028055 Membrane insertase YidC/Oxa1, C-terminal IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes IPR020568 Ribosomal protein S5 domain 2-type fold IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPR000100 Ribonuclease P IPR020539 Ribonuclease P, conserved site IPR000271 Ribosomal protein L34 IPR020939 Ribosomal protein L34, conserved site IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm IPR023165 rRNA adenine dimethylase-like IPR020596 Ribosomal RNA adenine methylase transferase, conserved site IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR002575 Aminoglycoside phosphotransferase IPR011009 Protein kinase-like domain superfamily IPR010001 SigmaK-factor processing regulatory BofA IPR000620 EamA domain IPR011991 ArsR-like helix-turn-helix domain IPR001845 HTH ArsR-type DNA-binding domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain IPR023546 Methylated-DNA--protein-cysteine methyltransferase IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily IPR036388 Winged helix-like DNA-binding domain superfamily IPR035451 Ada-like domain superfamily IPR004026 Ada DNA repair, metal-binding IPR009057 Homeobox-like domain superfamily IPR018060 DNA binding HTH domain, AraC-type IPR018062 HTH domain AraC-type, conserved site IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR000014 PAS domain IPR013767 PAS fold IPR033463 Single cache domain 3 IPR029151 Periplasmic sensor-like domain superfamily IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB IPR039506 SpoOB, alpha-helical domain IPR011006 CheY-like superfamily IPR024187 Signal transduction response regulator, citrate/malate metabolism IPR001789 Signal transduction response regulator, receiver domain IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes IPR004679 2-hydroxycarboxylate transporter IPR033878 Nitroreductase NfsB-like IPR029479 Nitroreductase IPR000415 Nitroreductase-like IPR009061 Putative DNA-binding domain superfamily IPR000551 MerR-type HTH domain IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain IPR012925 TipAS antibiotic-recognition domain IPR000911 Ribosomal protein L11/L12 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily IPR006519 Ribosomal protein L11, bacterial-type IPR020783 Ribosomal protein L11, C-terminal IPR036769 Ribosomal protein L11, C-terminal domain superfamily IPR020785 Ribosomal protein L11, conserved site IPR020784 Ribosomal protein L11, N-terminal IPR011294 3-hydroxybutyrate dehydrogenase IPR036291 NAD(P)-binding domain superfamily IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR002347 Short-chain dehydrogenase/reductase SDR IPR012349 FMN-binding split barrel IPR007396 Transcriptional regulator PAI 2-type IPR014635 Alpha-amylase, MalS type IPR006047 Glycosyl hydrolase, family 13, catalytic domain IPR017853 Glycoside hydrolase superfamily IPR018045 Sulphate anion transporter, conserved site IPR011547 SLC26A/SulP transporter domain IPR001902 SLC26A/SulP transporter IPR002645 STAS domain IPR036513 STAS domain superfamily IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain IPR023186 Inosine/uridine-preferring nucleoside hydrolase IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA IPR036452 Ribonucleoside hydrolase-like IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR004033 UbiE/COQ5 methyltransferase IPR023576 UbiE/COQ5 methyltransferase, conserved site IPR006148 Glucosamine/galactosamine-6-phosphate isomerase IPR004547 Glucosamine-6-phosphate isomerase IPR018321 Glucosamine-6-phosphate isomerase, conserved site IPR037171 NagB/RpiA transferase-like IPR006680 Amidohydrolase-related IPR003764 N-acetylglucosamine-6-phosphate deacetylase IPR011059 Metal-dependent hydrolase, composite domain superfamily IPR032466 Metal-dependent hydrolase IPR036878 Glucose permease domain IIB IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site IPR003352 Phosphotransferase system, EIIC IPR013013 Phosphotransferase system, EIIC component, type 1 IPR001996 Phosphotransferase system, IIB component, type 1 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component IPR036878 Glucose permease domain IIB IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site IPR003352 Phosphotransferase system, EIIC IPR013013 Phosphotransferase system, EIIC component, type 1 IPR001996 Phosphotransferase system, IIB component, type 1 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component IPR000485 AsnC-type HTH domain IPR011008 Dimeric alpha-beta barrel IPR019888 Transcription regulator AsnC-type IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR004090 Chemotaxis methyl-accepting receptor IPR003660 HAMP domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR033463 Single cache domain 3 IPR029151 Periplasmic sensor-like domain superfamily IPR001123 Amino acid exporter protein, LeuE-type IPR036412 HAD-like superfamily IPR006439 HAD hydrolase, subfamily IA IPR041492 Haloacid dehalogenase-like hydrolase IPR023214 HAD superfamily IPR023198 Phosphoglycolate phosphatase-like, domain 2 IPR023733 Pyrophosphatase PpaX IPR001123 Amino acid exporter protein, LeuE-type IPR004839 Aminotransferase, class I/classII IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR000524 Transcription regulator HTH, GntR IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR003607 HD/PDEase domain IPR006674 HD domain IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal IPR006276 Cobalamin-independent methionine synthase IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal IPR038071 UROD/MetE-like superfamily IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR012693 ABC transporter, phosphonate import, PhnC IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR000310 Orn/Lys/Arg decarboxylase, major domain IPR008286 Orn/Lys/Arg decarboxylase, C-terminal IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily IPR015424 Pyridoxal phosphate-dependent transferase IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR003593 AAA+ ATPase domain IPR011527 ABC transporter type 1, transmembrane domain IPR036640 ABC transporter type 1, transmembrane domain superfamily IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR010132 ATPase, type I secretion system, HlyB IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005074 Peptidase C39, bacteriocin processing IPR039395 Peptidase C39-like A IPR039421 Type I protein exporter IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR039430 Thymidylate kinase-like domain IPR018095 Thymidylate kinase, conserved site IPR018094 Thymidylate kinase IPR012341 Six-hairpin glycosidase-like superfamily IPR007822 Lanthionine synthetase C-like IPR025410 Lantibiotic biosynthesis protein, dehydration domain IPR017146 Type 2 lantibiotic biosynthesis protein LanM IPR029243 Lantibiotic alpha component IPR002288 DNA gyrase B subunit, C-terminal IPR011557 DNA gyrase, subunit B IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR020568 Ribosomal protein S5 domain 2-type fold IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPR001241 DNA topoisomerase, type IIA IPR013760 DNA topoisomerase, type IIA-like domain superfamily IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 IPR018522 DNA topoisomerase, type IIA, conserved site IPR006171 TOPRIM domain IPR034160 DNA gyrase subunit B, TOPRIM domain IPR002549 Transmembrane protein TqsA-like IPR014227 Putative transport protein YtvI-like IPR003824 Undecaprenyl-diphosphatase UppP IPR036291 NAD(P)-binding domain superfamily IPR006037 Regulator of K+ conductance, C-terminal IPR036721 Regulator of K+ conductance, C-terminal domain superfamily IPR003148 Regulator of K+ conductance, N-terminal IPR036291 NAD(P)-binding domain superfamily IPR006037 Regulator of K+ conductance, C-terminal IPR036721 Regulator of K+ conductance, C-terminal domain superfamily IPR003148 Regulator of K+ conductance, N-terminal IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR012693 ABC transporter, phosphonate import, PhnC IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR005769 ABC transporter, permease PhnE/PtxC IPR004622 DNA polymerase III, delta prime subunit IPR015199 DNA polymerase III, delta subunit, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR007557 PSP1, C-terminal IPR006059 Bacterial extracellular solute-binding protein IPR041522 CdaR, GGDEF-like domain IPR009057 Homeobox-like domain superfamily IPR018060 DNA binding HTH domain, AraC-type IPR008928 Six-hairpin glycosidase superfamily IPR012341 Six-hairpin glycosidase-like superfamily IPR010905 Glycosyl hydrolase, family 88 IPR004104 Oxidoreductase, C-terminal IPR036291 NAD(P)-binding domain superfamily IPR000683 Oxidoreductase, N-terminal IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 IPR004710 Bile acid:sodium symporter IPR038770 Sodium/solute symporter superfamily IPR007392 D-galactarate/Altronate dehydratase, C-terminal IPR013974 SAF domain IPR010377 Initiation control protein YabA IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPR013328 6-phosphogluconate dehydrogenase, domain 2 IPR023668 Altronate oxidoreductase IPR013118 Mannitol dehydrogenase, C-terminal IPR013131 Mannitol dehydrogenase, N-terminal IPR036291 NAD(P)-binding domain superfamily IPR036412 HAD-like superfamily IPR006379 HAD-superfamily hydrolase, subfamily IIB IPR023214 HAD superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR031322 Shikimate kinase/gluconokinase IPR000623 Shikimate kinase/Threonine synthase-like 1 IPR005144 ATP-cone domain IPR013346 Ribonucleotide reductase, class I , alpha subunit IPR000788 Ribonucleotide reductase large subunit, C-terminal IPR013509 Ribonucleotide reductase large subunit, N-terminal IPR008926 Ribonucleotide reductase R1 subunit, N-terminal IPR039718 Ribonucleoside-diphosphate reductase large subunit IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR007848 Methyltransferase small domain IPR009078 Ferritin-like superfamily IPR012348 Ribonucleotide reductase-like IPR033909 Ribonucleotide reductase small subunit IPR000358 Ribonucleotide reductase small subunit family IPR009050 Globin-like superfamily IPR012292 Globin/Protoglobin IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR039379 Protoglobin, globin sensor domain IPR036291 NAD(P)-binding domain superfamily IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR002347 Short-chain dehydrogenase/reductase SDR IPR011991 ArsR-like helix-turn-helix domain IPR002577 Helix-turn-helix, HxlR type IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR000305 GIY-YIG endonuclease IPR035901 GIY-YIG endonuclease superfamily IPR003593 AAA+ ATPase domain IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR008995 Molybdate/tungstate binding, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit IPR013611 Transport-associated OB, type 2 IPR026045 Ferric binding protein IPR006059 Bacterial extracellular solute-binding protein IPR006061 Solute-binding family 1, conserved site IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR006129 Adhesin B IPR006128 Adhesion lipoprotein IPR006127 Periplasmic solute binding protein, ZnuA-like IPR022764 Peptidase S54, rhomboid domain IPR035952 Rhomboid-like superfamily IPR008278 4'-phosphopantetheinyl transferase domain IPR037143 4'-phosphopantetheinyl transferase domain superfamily IPR002582 Holo-[acyl carrier protein] synthase IPR004568 Phosphopantetheine-protein transferase domain IPR029046 Lipoprotein localisation LolA/LolB/LppX IPR000821 Alanine racemase IPR009006 Alanine racemase/group IV decarboxylase, C-terminal IPR011079 Alanine racemase, C-terminal IPR001608 Alanine racemase, N-terminal IPR020622 Alanine racemase, pyridoxal-phosphate attachment site IPR029066 PLP-binding barrel IPR013321 Arc-type ribbon-helix-helix IPR002145 Ribbon-helix-helix protein, CopG IPR010985 Ribbon-helix-helix IPR000878 Tetrapyrrole methylase IPR035996 Tetrapyrrole methylase superfamily IPR014777 Tetrapyrrole methylase, subdomain 1 IPR014776 Tetrapyrrole methylase, subdomain 2 IPR008189 rRNA small subunit methyltransferase I IPR018063 SAM-dependent methyltransferase RsmI, conserved site IPR003477 mRNA interferase PemK-like IPR011067 Plasmid maintenance toxin/Cell growth inhibitor IPR012292 Globin/Protoglobin IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain IPR002645 STAS domain IPR036513 STAS domain superfamily IPR002645 STAS domain IPR036513 STAS domain superfamily IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR017944 KaiA/RbsU helical domain superfamily IPR036457 PPM-type phosphatase domain superfamily IPR001932 PPM-type phosphatase domain IPR014787 Phosphoserine phosphatase RsbU, N-terminal IPR003658 Anti-sigma factor antagonist IPR002645 STAS domain IPR036513 STAS domain superfamily IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR010193 Serine-protein kinase RsbW IPR014284 RNA polymerase sigma-70 like domain IPR014288 RNA polymerase sigma-B factor IPR014322 RNA polymerase sigma-B/F/G type IPR000943 RNA polymerase sigma-70 IPR007627 RNA polymerase sigma-70 region 2 IPR007624 RNA polymerase sigma-70 region 3 IPR007630 RNA polymerase sigma-70 region 4 IPR013325 RNA polymerase sigma factor, region 2 IPR013324 RNA polymerase sigma factor, region 3/4-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR041692 HHH domain 9 IPR012340 Nucleic acid-binding, OB-fold IPR012337 Ribonuclease H-like superfamily IPR010994 RuvA domain 2-like IPR022967 RNA-binding domain, S1 IPR003029 S1 domain IPR023323 Tex-like domain superfamily IPR023319 Tex-like protein, HTH domain superfamily IPR018974 Tex-like protein, N-terminal IPR032639 Tex protein, YqgF-like domain IPR006641 YqgF/RNase H-like domain IPR037027 YqgF/RNase H-like domain superfamily IPR006640 SprT-like IPR035240 SprT-like, zinc ribbon domain IPR023524 Uncharacterised protein family SprT-like IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA IPR018211 Alcohol dehydrogenase, iron-type, conserved site IPR039697 Iron-type alcohol dehydrogenase-like IPR013149 Alcohol dehydrogenase, C-terminal IPR013154 Alcohol dehydrogenase, N-terminal IPR002328 Alcohol dehydrogenase, zinc-type, conserved site IPR011032 GroES-like superfamily IPR036291 NAD(P)-binding domain superfamily IPR020843 Polyketide synthase, enoylreductase domain IPR016161 Aldehyde/histidinol dehydrogenase IPR016163 Aldehyde dehydrogenase, C-terminal IPR029510 Aldehyde dehydrogenase, glutamic acid active site IPR016162 Aldehyde dehydrogenase, N-terminal IPR015590 Aldehyde dehydrogenase domain IPR012394 Aldehyde dehydrogenase NAD(P)-dependent IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR010918 PurM-like, C-terminal domain IPR036676 PurM-like, C-terminal domain superfamily IPR016188 PurM-like, N-terminal domain IPR036921 PurM-like, N-terminal domain superfamily IPR006283 Thiamine-monophosphate kinase IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE IPR005743 DNA gyrase, subunit A IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal IPR013760 DNA topoisomerase, type IIA-like domain superfamily IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal IPR014758 Methionyl-tRNA synthetase IPR023457 Methionine-tRNA synthetase, type 2 IPR015413 Methionyl/Leucyl tRNA synthetase IPR033911 Methioninyl-tRNA synthetase core domain IPR012340 Nucleic acid-binding, OB-fold IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR002547 tRNA-binding domain IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IPR000905 Gcp-like domain IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB IPR006464 N-acetyltransferase RimI/Ard1 IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR000905 Gcp-like domain IPR017861 Kae1/TsaD family IPR017860 Peptidase M22, conserved site IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD IPR003781 CoA-binding IPR036291 NAD(P)-binding domain superfamily IPR009718 Rex DNA-binding, C-terminal domain IPR022876 Redox-sensing transcriptional repressor Rex IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR003369 Sec-independent protein translocase protein TatA/B/E IPR006312 Sec-independent protein translocase protein TatA/E IPR019820 Sec-independent periplasmic protein translocase, conserved site IPR002033 Sec-independent periplasmic protein translocase TatC IPR004638 Drug resistance transporter EmrB-like IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR018193 Glycerate kinase, flavodoxin-like fold IPR004381 Glycerate kinase IPR018197 Glycerate kinase, restriction-enzyme-like fold IPR036129 Glycerate kinase superfamily IPR018228 Deoxyribonuclease, TatD-related, conserved site IPR015991 Uncharacterised hydrolase TatD-type IPR032466 Metal-dependent hydrolase IPR001130 TatD family IPR000428 Copper ion binding protein IPR017969 Heavy-metal-associated, conserved site IPR006122 Heavy metal-associated domain, copper ion-binding IPR006121 Heavy metal-associated domain, HMA IPR036163 Heavy metal-associated domain superfamily IPR023299 P-type ATPase, cytoplasmic domain N IPR018303 P-type ATPase, phosphorylation site IPR023298 P-type ATPase, transmembrane domain superfamily IPR008250 P-type ATPase, A domain superfamily IPR036412 HAD-like superfamily IPR023214 HAD superfamily IPR017969 Heavy-metal-associated, conserved site IPR006122 Heavy metal-associated domain, copper ion-binding IPR006121 Heavy metal-associated domain, HMA IPR036163 Heavy metal-associated domain superfamily IPR027256 P-type ATPase, subfamily IB IPR001757 P-type ATPase IPR003735 Metal-sensitive transcriptional repressor IPR038390 Metal-sensitive transcriptional repressor superfamily IPR003675 CAAX prenyl protease 2 IPR020818 GroES chaperonin family IPR037124 GroES chaperonin superfamily IPR018369 Chaperonin GroES, conserved site IPR011032 GroES-like superfamily IPR018370 Chaperonin Cpn60, conserved site IPR001844 Chaperonin Cpn60 IPR002423 Chaperonin Cpn60/TCP-1 family IPR027409 GroEL-like apical domain superfamily IPR027413 GroEL-like equatorial domain superfamily IPR027410 TCP-1-like chaperonin intermediate domain superfamily IPR033479 Double Cache domain 1 IPR003660 HAMP domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR029151 Periplasmic sensor-like domain superfamily IPR011980 Nickel ABC transporter, substrate-binding protein NikA IPR030678 Peptide/nickel binding protein, MppA-type IPR039424 Solute-binding protein family 5 IPR023765 Solute-binding protein family 5, conserved site IPR000914 Solute-binding protein family 5 domain IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPR035906 MetI-like superfamily IPR014156 Nickel ABC transporter, permease subunit NikB IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR005149 Transcription regulator PadR, N-terminal IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR004466 Ribonuclease M5 IPR025156 Ribonuclease M5, C-terminal domain IPR006171 TOPRIM domain IPR034141 Ribonuclease M5-like, TOPRIM domain IPR001128 Cytochrome P450 IPR017972 Cytochrome P450, conserved site IPR002403 Cytochrome P450, E-class, group IV IPR036396 Cytochrome P450 superfamily IPR011006 CheY-like superfamily IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR000792 Transcription regulator LuxR, C-terminal IPR036388 Winged helix-like DNA-binding domain superfamily IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm IPR023165 rRNA adenine dimethylase-like IPR020596 Ribosomal RNA adenine methylase transferase, conserved site IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal IPR011530 Ribosomal RNA adenine dimethylase IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR041444 YhfZ, helix-turn-helix domain IPR032791 Uncharacterised protein YhfZ, C-terminal domain IPR021238 Protein of unknown function DUF2620 IPR019733 Uncharacterised protein family YhfT IPR004839 Aminotransferase, class I/classII IPR015424 Pyridoxal phosphate-dependent transferase IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR001608 Alanine racemase, N-terminal IPR029066 PLP-binding barrel IPR017850 Alkaline-phosphatase-like, core domain superfamily IPR010045 Phosphopentomutase IPR006124 Metalloenzyme IPR024052 Phosphopentomutase DeoB cap domain superfamily IPR008764 Peptidase U57, YabG IPR001360 Glycoside hydrolase family 1 IPR018120 Glycoside hydrolase family 1, active site IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site IPR017853 Glycoside hydrolase superfamily IPR003445 Cation transporter IPR004772 TrkH potassium transport family IPR005102 Carbohydrate binding X2 domain IPR040946 Endoglucanase B, carbohydrate binding domain IPR001547 Glycoside hydrolase, family 5 IPR018087 Glycoside hydrolase, family 5, conserved site IPR016282 Glycoside hydrolase, family 5, endoglucanase B IPR017853 Glycoside hydrolase superfamily IPR013783 Immunoglobulin-like fold IPR014756 Immunoglobulin E-set IPR011703 ATPase, AAA-3 IPR041628 ChlI/MoxR, AAA lid domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR011703 ATPase, AAA-3 IPR041628 ChlI/MoxR, AAA lid domain IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR002881 Domain of unknown function DUF58 IPR009366 Protein Veg IPR025403 Domain of unknown function DUF4129 IPR038765 Papain-like cysteine peptidase superfamily IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal IPR002931 Transglutaminase-like IPR029062 Class I glutamine amidotransferase-like IPR017926 Glutamine amidotransferase IPR001674 GMP synthase, C-terminal IPR004739 GMP synthase, glutamine amidotransferase IPR022955 GMP synthase IPR025777 GMP synthetase ATP pyrophosphatase domain IPR022310 NAD/GMP synthase IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR026033 Azaguanine-like transporters IPR006043 Xanthine/uracil/vitamin C permease IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding IPR017927 FAD-binding domain, ferredoxin reductase-type IPR001094 Flavodoxin-like IPR008254 Flavodoxin/nitric oxide synthase IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase IPR029039 Flavoprotein-like superfamily IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily IPR001433 Oxidoreductase FAD/NAD(P)-binding IPR017938 Riboflavin synthase-like beta-barrel IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily IPR006067 Nitrite/sulphite reductase 4Fe-4S domain IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site IPR001448 Small acid-soluble spore protein, alpha/beta-type IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR004737 Nitrate transporter IPR007419 BFD-like [2Fe-2S]-binding domain IPR041854 BFD-like [2Fe-2S]-binding domain superfamily IPR036188 FAD/NAD(P)-binding domain superfamily IPR023753 FAD/NAD(P)-binding domain IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB IPR017121 Nitrite reductase [NAD(P)H], large subunit IPR006067 Nitrite/sulphite reductase 4Fe-4S domain IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site IPR041575 NADH-rubredoxin oxidoreductase, C-terminal IPR012748 Rieske-like [2Fe-2S] domain, NirD-type IPR017941 Rieske [2Fe-2S] iron-sulphur domain IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily IPR009010 Aspartate decarboxylase-like domain superfamily IPR006657 Molybdopterin dinucleotide-binding domain IPR006656 Molybdopterin oxidoreductase IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site IPR005163 3-alpha domain IPR005302 Molybdenum cofactor sulfurase, C-terminal IPR011037 Pyruvate kinase-like, insert domain superfamily IPR012328 Chalcone/stilbene synthase, C-terminal IPR018088 Chalcone/stilbene synthase, active site IPR001099 Chalcone/stilbene synthase, N-terminal IPR011141 Polyketide synthase, type III IPR016039 Thiolase-like IPR007269 Isoprenylcysteine carboxyl methyltransferase IPR039425 RNA polymerase sigma-70 like IPR014284 RNA polymerase sigma-70 like domain IPR000838 RNA polymerase sigma factor 70, ECF, conserved site IPR007627 RNA polymerase sigma-70 region 2 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 IPR013325 RNA polymerase sigma factor, region 2 IPR013324 RNA polymerase sigma factor, region 3/4-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR013750 GHMP kinase, C-terminal domain IPR036554 GHMP kinase, C-terminal domain superfamily IPR006204 GHMP kinase N-terminal domain IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase IPR020568 Ribosomal protein S5 domain 2-type fold IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPR019264 Domain of unknown function DUF2179 IPR022930 Protein of unknown function UPF0316 IPR025930 NETI protein IPR033747 Class I PurE IPR000031 PurE domain IPR024694 PurE, prokaryotic type IPR035893 PurE domain superfamily IPR011761 ATP-grasp fold IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type IPR013815 ATP-grasp fold, subdomain 1 IPR016185 Pre-ATP-grasp domain superfamily IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain IPR011054 Rudiment single hybrid motif IPR019468 Adenylosuccinate lyase C-terminal IPR024083 Fumarase/histidase, N-terminal IPR020557 Fumarate lyase, conserved site IPR000362 Fumarate lyase family IPR022761 Fumarate lyase, N-terminal IPR008948 L-Aspartase-like IPR004769 Adenylosuccinate lyase IPR028923 SAICAR synthetase/ADE2, N-terminal IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase IPR018236 SAICAR synthetase, conserved site IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily IPR029062 Class I glutamine amidotransferase-like IPR017926 Glutamine amidotransferase IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ IPR010074 Phosphoribosylformylglycinamidine subunit PurL IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain IPR010918 PurM-like, C-terminal domain IPR036676 PurM-like, C-terminal domain superfamily IPR016188 PurM-like, N-terminal domain IPR036921 PurM-like, N-terminal domain superfamily IPR017932 Glutamine amidotransferase type 2 domain IPR029055 Nucleophile aminohydrolases, N-terminal IPR000836 Phosphoribosyltransferase domain IPR029057 Phosphoribosyltransferase-like IPR005854 Amidophosphoribosyltransferase IPR035584 Amidophosphoribosyltransferase, N-terminal IPR000836 Phosphoribosyltransferase domain IPR029057 Phosphoribosyltransferase-like IPR015265 Bacterial purine repressor, N-terminal IPR010078 Pur operon repressor IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR010918 PurM-like, C-terminal domain IPR036676 PurM-like, C-terminal domain superfamily IPR016188 PurM-like, N-terminal domain IPR036921 PurM-like, N-terminal domain superfamily IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase IPR002376 Formyl transferase, N-terminal IPR036477 Formyl transferase, N-terminal domain superfamily IPR004607 Phosphoribosylglycinamide formyltransferase IPR001555 Phosphoribosylglycinamide formyltransferase, active site IPR024051 AICAR transformylase, duplicated domain superfamily IPR016193 Cytidine deaminase-like IPR011607 Methylglyoxal synthase-like domain IPR036914 Methylglyoxal synthase-like domain superfamily IPR002695 Bifunctional purine biosynthesis protein PurH-like IPR011761 ATP-grasp fold IPR013815 ATP-grasp fold, subdomain 1 IPR016185 Pre-ATP-grasp domain superfamily IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IPR000115 Phosphoribosylglycinamide synthetase IPR020560 Phosphoribosylglycinamide synthetase, C-domain IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily IPR020559 Phosphoribosylglycinamide synthetase, conserved site IPR020562 Phosphoribosylglycinamide synthetase, N-terminal IPR011054 Rudiment single hybrid motif IPR006679 Adenine deaminase IPR026912 Adenine deaminase C-terminal domain IPR006680 Amidohydrolase-related IPR011059 Metal-dependent hydrolase, composite domain superfamily IPR032466 Metal-dependent hydrolase IPR035328 Protein of unknown function DUF3048, C-terminal domain IPR021416 Protein of unknown function DUF3048, N-terminal IPR023158 YerB-like superfamily IPR000831 Trp repressor IPR010921 Trp repressor/replication initiator IPR038116 TrpR-like superfamily IPR013368 TrpR homologue YerC/YecD IPR006679 Adenine deaminase IPR026912 Adenine deaminase C-terminal domain IPR006680 Amidohydrolase-related IPR011059 Metal-dependent hydrolase, composite domain superfamily IPR032466 Metal-dependent hydrolase IPR011006 CheY-like superfamily IPR003607 HD/PDEase domain IPR037522 HD-GYP domain IPR001789 Signal transduction response regulator, receiver domain IPR006056 RidA family IPR019897 RidA, conserved site IPR035959 RutC-like superfamily IPR006175 YjgF/YER057c/UK114 family IPR002765 Uncharacterised protein family UPF0145 IPR035439 UPF0145 domain superfamily IPR039074 GGGP/HepGP synthase group I IPR038597 GGGP/HepGP synthase superfamily IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase IPR005751 ATP-dependent DNA helicase PcrA IPR013986 DExx box DNA helicase domain superfamily IPR014017 UvrD-like DNA helicase, C-terminal IPR000212 DNA helicase, UvrD/REP type IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR014016 UvrD-like helicase, ATP-binding domain IPR034739 UvrD/AddA helicase, N-terminal IPR001357 BRCT domain IPR036420 BRCT domain superfamily IPR041663 DisA/LigA, helix-hairpin-helix motif IPR018239 NAD-dependent DNA ligase, active site IPR033136 NAD-dependent DNA ligase, conserved site IPR001679 NAD-dependent DNA ligase IPR013839 NAD-dependent DNA ligase, adenylation IPR013840 NAD-dependent DNA ligase, N-terminal IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 IPR012340 Nucleic acid-binding, OB-fold IPR004150 NAD-dependent DNA ligase, OB-fold IPR010994 RuvA domain 2-like IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type IPR011426 CamS sex pheromone cAM373 IPR007170 Stage V sporulation protein G IPR036751 Stage V sporulation protein G superfamily IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IPR000524 Transcription regulator HTH, GntR IPR011663 UbiC transcription regulator-associated IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR011991 ArsR-like helix-turn-helix domain IPR002577 Helix-turn-helix, HxlR type IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR010242 Transcription factor HTH, IscR IPR030489 Transcription regulator Rrf2-type, conserved site IPR000944 Transcription regulator Rrf2-type IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR036188 FAD/NAD(P)-binding domain superfamily IPR023753 FAD/NAD(P)-binding domain IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site IPR005982 Thioredoxin reductase IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR004033 UbiE/COQ5 methyltransferase IPR038377 Sodium/glucose symporter superfamily IPR011851 Sodium/proline symporter IPR001734 Sodium/solute symporter IPR018212 Sodium/solute symporter, conserved site IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase IPR038009 GlmU, C-terminal LbH domain IPR001451 Hexapeptide repeat IPR018357 Hexapeptide transferase, conserved site IPR005835 Nucleotidyl transferase domain IPR029044 Nucleotide-diphospho-sugar transferases IPR011004 Trimeric LpxA-like superfamily IPR014743 Chloride channel, core IPR001807 Chloride channel, voltage gated IPR003837 Glu-tRNAGln amidotransferase C subunit IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C IPR000120 Amidase IPR020556 Amidase, conserved site IPR023631 Amidase signature domain IPR036928 Amidase signature (AS) superfamily IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic IPR018027 Asn/Gln amidotransferase IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site IPR014746 Glutamine synthetase/guanido kinase, catalytic domain IPR010499 Bacterial transcription activator, effector binding IPR029442 GyrI-like small molecule binding domain IPR011256 Regulatory factor, effector binding domain superfamily IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain IPR000836 Phosphoribosyltransferase domain IPR029057 Phosphoribosyltransferase-like IPR005946 Ribose-phosphate pyrophosphokinase IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type IPR002937 Amine oxidase IPR036188 FAD/NAD(P)-binding domain superfamily IPR001613 Flavin amine oxidase IPR008302 Uncharacterised conserved protein UCP016719 IPR019800 Glycoside hydrolase, family 3, active site IPR002772 Glycoside hydrolase family 3 C-terminal domain IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily IPR001764 Glycoside hydrolase, family 3, N-terminal IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily IPR017853 Glycoside hydrolase superfamily IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal IPR005218 Diacylglycerol/lipid kinase IPR001206 Diacylglycerol kinase, catalytic domain IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal IPR029751 Ribosomal protein L25 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily IPR020057 Ribosomal protein L25, beta domain IPR037121 Ribosomal protein L25, C-terminal IPR001021 Ribosomal protein L25, long-form IPR016161 Aldehyde/histidinol dehydrogenase IPR016163 Aldehyde dehydrogenase, C-terminal IPR016160 Aldehyde dehydrogenase, cysteine active site IPR029510 Aldehyde dehydrogenase, glutamic acid active site IPR016162 Aldehyde dehydrogenase, N-terminal IPR015590 Aldehyde dehydrogenase domain IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain IPR019491 Lipoate protein ligase, C-terminal IPR004562 Lipoyltransferase/lipoate-protein ligase IPR000209 Peptidase S8/S53 domain IPR036852 Peptidase S8/S53 domain superfamily IPR023827 Peptidase S8, subtilisin, Asp-active site IPR022398 Peptidase S8, subtilisin, His-active site IPR023828 Peptidase S8, subtilisin, Ser-active site IPR015500 Peptidase S8, subtilisin-related IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily IPR034202 Subtilisin Carlsberg-like catalytic domain IPR000209 Peptidase S8/S53 domain IPR036852 Peptidase S8/S53 domain superfamily IPR023827 Peptidase S8, subtilisin, Asp-active site IPR022398 Peptidase S8, subtilisin, His-active site IPR023828 Peptidase S8, subtilisin, Ser-active site IPR015500 Peptidase S8, subtilisin-related IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily IPR034202 Subtilisin Carlsberg-like catalytic domain IPR000209 Peptidase S8/S53 domain IPR036852 Peptidase S8/S53 domain superfamily IPR023827 Peptidase S8, subtilisin, Asp-active site IPR022398 Peptidase S8, subtilisin, His-active site IPR023828 Peptidase S8, subtilisin, Ser-active site IPR015500 Peptidase S8, subtilisin-related IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily IPR034202 Subtilisin Carlsberg-like catalytic domain IPR000390 Small multidrug resistance protein family IPR000390 Small multidrug resistance protein family IPR030390 RNA methyltransferase TrmA, active site IPR030391 RNA methyltransferase TrmA, conserved site IPR012340 Nucleic acid-binding, OB-fold IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR002792 TRAM domain IPR010280 (Uracil-5)-methyltransferase family IPR001328 Peptidyl-tRNA hydrolase IPR018171 Peptidyl-tRNA hydrolase, conserved site IPR036416 Peptidyl-tRNA hydrolase superfamily IPR012337 Ribonuclease H-like superfamily IPR002559 Transposase, IS4-like IPR007921 CHAP domain IPR018392 LysM domain IPR036779 LysM domain superfamily IPR038765 Papain-like cysteine peptidase superfamily IPR011991 ArsR-like helix-turn-helix domain IPR001845 HTH ArsR-type DNA-binding domain IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR029062 Class I glutamine amidotransferase-like IPR005320 Peptidase S51 IPR002022 Pectate lyase IPR012334 Pectin lyase fold IPR011050 Pectin lyase fold/virulence factor IPR000600 ROK family IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR036101 CarD-like/TRCF domain superfamily IPR003711 CarD-like/TRCF domain IPR011545 DEAD/DEAH box helicase domain IPR014001 Helicase superfamily 1/2, ATP-binding domain IPR001650 Helicase, C-terminal IPR004576 Transcription-repair coupling factor IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR037235 TRCF-like, C-terminal domain IPR005118 Transcription-repair-coupling factor, C-terminal domain IPR041471 UvrB, interaction domain IPR004682 TRAP transporter solute receptor, DctP family IPR018389 TRAP transporter solute receptor DctP/TeaA IPR038404 TRAP transporter solute receptor DctP superfamily IPR007387 TRAP transporter, small membrane protein DctQ IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit IPR004681 TRAP transporter large membrane protein DctM IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 IPR033403 Domain of unknown function DUF5110 IPR011013 Galactose mutarotase-like domain superfamily IPR000322 Glycoside hydrolase family 31 IPR030458 Glycosyl hydrolases family 31, active site IPR030459 Glycosyl hydrolases family 31, conserved site IPR025887 Glycoside hydrolase family 31, N-terminal domain IPR013780 Glycosyl hydrolase, all-beta IPR017853 Glycoside hydrolase superfamily IPR032466 Metal-dependent hydrolase IPR003766 Uronate isomerase IPR004628 Mannonate dehydratase IPR036237 Xylose isomerase-like superfamily IPR036291 NAD(P)-binding domain superfamily IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR002347 Short-chain dehydrogenase/reductase SDR IPR036291 NAD(P)-binding domain superfamily IPR000683 Oxidoreductase, N-terminal IPR004104 Oxidoreductase, C-terminal IPR036291 NAD(P)-binding domain superfamily IPR000683 Oxidoreductase, N-terminal IPR029016 GAF-like domain superfamily IPR014213 Sporulation stage V, protein T IPR007159 SpoVT-AbrB domain IPR037914 SpoVT-AbrB domain superfamily IPR039472 Sporulation stage V protein T, GAF domain IPR009057 Homeobox-like domain superfamily IPR018060 DNA binding HTH domain, AraC-type IPR018062 HTH domain AraC-type, conserved site IPR018771 PocR domain IPR020449 Transcription regulator HTH, AraC- type IPR003593 AAA+ ATPase domain IPR011527 ABC transporter type 1, transmembrane domain IPR036640 ABC transporter type 1, transmembrane domain superfamily IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR039421 Type I protein exporter IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR004602 UvrABC system subunit A IPR041552 UvrA DNA-binding domain IPR041102 UvrA, interaction domain IPR001466 Beta-lactamase-related IPR012338 Beta-lactamase/transpeptidase-like IPR004869 Membrane transport protein MMPL domain IPR000731 Sterol-sensing domain IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type IPR029303 Polysaccharide biosynthesis protein, C-terminal domain IPR002797 Polysaccharide biosynthesis protein IPR003313 AraC-type arabinose-binding/dimerisation domain IPR009057 Homeobox-like domain superfamily IPR037923 Transcription regulator HTH-like IPR018060 DNA binding HTH domain, AraC-type IPR018062 HTH domain AraC-type, conserved site IPR014710 RmlC-like jelly roll fold IPR020449 Transcription regulator HTH, AraC- type IPR000620 EamA domain IPR000878 Tetrapyrrole methylase IPR035996 Tetrapyrrole methylase superfamily IPR014777 Tetrapyrrole methylase, subdomain 1 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core IPR011551 NTP pyrophosphohydrolase MazG IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted IPR035013 YabN, N-terminal IPR002577 Helix-turn-helix, HxlR type IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR013149 Alcohol dehydrogenase, C-terminal IPR013154 Alcohol dehydrogenase, N-terminal IPR014182 Alcohol dehydrogenase, zinc-binding type 1 IPR011032 GroES-like superfamily IPR036291 NAD(P)-binding domain superfamily IPR020843 Polyketide synthase, enoylreductase domain IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site IPR033943 Ba3-like heme-copper oxidase subunit I IPR023616 Cytochrome c oxidase-like, subunit I domain IPR036927 Cytochrome c oxidase-like, subunit I superfamily IPR000883 Cytochrome c oxidase subunit I IPR023615 Cytochrome c oxidase, subunit I, copper-binding site IPR002429 Cytochrome c oxidase subunit II-like C-terminal IPR001505 Copper centre Cu(A) IPR008972 Cupredoxin IPR014222 Cytochrome c oxidase, subunit II IPR011759 Cytochrome C oxidase subunit II, transmembrane domain IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily IPR025490 RNA-binding protein, HP1423 type IPR002942 RNA-binding S4 domain IPR036986 RNA-binding S4 domain superfamily IPR012851 Spore coat protein CotF-like IPR012851 Spore coat protein CotF-like IPR023299 P-type ATPase, cytoplasmic domain N IPR018303 P-type ATPase, phosphorylation site IPR023298 P-type ATPase, transmembrane domain superfamily IPR008250 P-type ATPase, A domain superfamily IPR036412 HAD-like superfamily IPR023214 HAD superfamily IPR027256 P-type ATPase, subfamily IB IPR001757 P-type ATPase IPR004680 Citrate transporter-like domain IPR014738 Citrate transporter IPR006680 Amidohydrolase-related IPR023512 Deaminase MtaD/DadD IPR011059 Metal-dependent hydrolase, composite domain superfamily IPR032466 Metal-dependent hydrolase IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily IPR017609 Xanthine dehydrogenase D subunit IPR002888 [2Fe-2S]-binding IPR036884 [2Fe-2S]-binding domain superfamily IPR036010 2Fe-2S ferredoxin-like superfamily IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site IPR012675 Beta-grasp domain superfamily IPR017611 Xanthine dehydrogenase E subunit IPR012504 Sporulation protein YabP IPR022476 Sporulation protein YabP/YqfC IPR038705 YabP superfamily IPR027022 ABC transporter permease protein, BceB-type IPR003838 ABC transporter permease protein domain IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily IPR002042 Uricase IPR019842 Uricase, conserved site IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily IPR002042 Uricase IPR019842 Uricase, conserved site IPR014306 Hydroxyisourate hydrolase IPR023418 Transthyretin, thyroxine binding site IPR023416 Transthyretin/hydroxyisourate hydrolase domain IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily IPR023419 Transthyretin, conserved site IPR014242 Spore cortex biosynthesis protein, YabQ IPR019074 Spore cortex biosynthesis protein, YabQ-like IPR010158 Amidase, carbamoylase-type IPR036264 Bacterial exopeptidase dimerisation domain IPR002933 Peptidase M20 IPR011650 Peptidase M20, dimerisation domain IPR000192 Aminotransferase class V domain IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 IPR016039 Thiolase-like IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II IPR037171 NagB/RpiA transferase-like IPR007324 Sugar-binding domain, putative IPR036388 Winged helix-like DNA-binding domain superfamily IPR012340 Nucleic acid-binding, OB-fold IPR022967 RNA-binding domain, S1 IPR003029 S1 domain IPR005814 Aminotransferase class-III IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR004472 Dethiobiotin synthase BioD IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR000600 ROK family IPR011013 Galactose mutarotase-like domain superfamily IPR041509 Glycosyl hydrolases 38, beta-1 domain IPR041147 Glycosyl hydrolases family 38, C-terminal beta sandwich domain IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel IPR011682 Glycosyl hydrolase family 38, C-terminal IPR015341 Glycoside hydrolase family 38, central domain IPR037094 Glycoside hydrolase family 38, central domain superfamily IPR000602 Glycoside hydrolase family 38, N-terminal domain IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily IPR028995 Glycoside hydrolase families 57/38, central domain superfamily IPR011013 Galactose mutarotase-like domain superfamily IPR041509 Glycosyl hydrolases 38, beta-1 domain IPR041147 Glycosyl hydrolases family 38, C-terminal beta sandwich domain IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel IPR011682 Glycosyl hydrolase family 38, C-terminal IPR015341 Glycoside hydrolase family 38, central domain IPR037094 Glycoside hydrolase family 38, central domain superfamily IPR000602 Glycoside hydrolase family 38, N-terminal domain IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily IPR028995 Glycoside hydrolase families 57/38, central domain superfamily IPR003018 GAF domain IPR029016 GAF-like domain superfamily IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR010559 Signal transduction histidine kinase, internal region IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region IPR022627 Domain of unknown function DUF3502 IPR036457 PPM-type phosphatase domain superfamily IPR001932 PPM-type phosphatase domain IPR014221 Sporulation stage II, protein E IPR014036 DeoR C-terminal sensor domain IPR001034 DeoR-type HTH domain IPR037171 NagB/RpiA transferase-like IPR018356 Transcription regulator, HTH DeoR-type, conserved site IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily IPR010737 Four-carbon acid sugar kinase, N-terminal domain IPR031475 Nucleotide-binding C-terminal domain IPR042213 Nucleotide-binding, C-terminal domain superfamily IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily IPR010737 Four-carbon acid sugar kinase, N-terminal domain IPR031475 Nucleotide-binding C-terminal domain IPR042213 Nucleotide-binding, C-terminal domain superfamily IPR005255 PdxA family IPR003474 Gluconate transporter IPR002035 von Willebrand factor, type A IPR036465 von Willebrand factor A-like domain superfamily IPR005490 L,D-transpeptidase catalytic domain IPR018392 LysM domain IPR036779 LysM domain superfamily IPR038063 L,D-transpeptidase catalytic domain-like IPR003593 AAA+ ATPase domain IPR011527 ABC transporter type 1, transmembrane domain IPR036640 ABC transporter type 1, transmembrane domain superfamily IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR039421 Type I protein exporter IPR003593 AAA+ ATPase domain IPR011527 ABC transporter type 1, transmembrane domain IPR036640 ABC transporter type 1, transmembrane domain superfamily IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR039421 Type I protein exporter IPR003593 AAA+ ATPase domain IPR011527 ABC transporter type 1, transmembrane domain IPR036640 ABC transporter type 1, transmembrane domain superfamily IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR039421 Type I protein exporter IPR003593 AAA+ ATPase domain IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR003594 Histidine kinase/HSP90-like ATPase IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPR005467 Histidine kinase domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPR011006 CheY-like superfamily IPR001867 OmpR/PhoB-type DNA-binding domain IPR016032 Signal transduction response regulator, C-terminal effector IPR001789 Signal transduction response regulator, receiver domain IPR039420 Transcriptional regulatory protein WalR-like IPR036388 Winged helix-like DNA-binding domain superfamily IPR011009 Protein kinase-like domain superfamily IPR000719 Protein kinase domain IPR017441 Protein kinase, ATP binding site IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC IPR025714 Methyltransferase domain IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type IPR002797 Polysaccharide biosynthesis protein IPR017142 Nitric oxide synthase, oxygenase subunit IPR004030 Nitric oxide synthase, N-terminal IPR036119 Nitric oxide synthase, N-terminal domain superfamily IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase IPR033524 Leu/Phe/Val dehydrogenases active site IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain IPR014362 Glutamate dehydrogenase IPR036291 NAD(P)-binding domain superfamily IPR033922 NAD(P) binding domain of glutamate dehydrogenase IPR024775 DinB-like domain IPR034660 DinB/YfiT-like putative metalloenzymes IPR022463 Fructose 1-phosphate kinase IPR002173 Carbohydrate/puine kinase, PfkB, conserved site IPR011611 Carbohydrate kinase PfkB IPR029056 Ribokinase-like IPR017583 Tagatose/fructose phosphokinase IPR016152 Phosphotransferase/anion transporter IPR002178 PTS EIIA type-2 domain IPR036095 PTS system IIB component-like superfamily IPR013011 Phosphotransferase system, EIIB component, type 2 IPR003501 Phosphotransferase system, EIIB component, type 2/3 IPR013014 Phosphotransferase system, EIIC component, type 2 IPR004715 Phosphotransferase system, IIA component fructose subfamily IPR003353 Phosphotransferase system, fructose-specific IIB subunit IPR006327 Phosphotransferase system, fructose IIC component IPR012651 Thiamine transporter ThiT IPR010619 Putative threonine/serine exporter IPR001278 Arginine-tRNA ligase IPR005148 Arginyl tRNA synthetase N-terminal domain IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily IPR035684 Arginyl-tRNA synthetase, catalytic core domain IPR008909 DALR anticodon binding IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IPR016181 Acyl-CoA N-acyltransferase IPR000182 GNAT domain IPR005119 LysR, substrate-binding IPR000847 Transcription regulator HTH, LysR IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR000390 Small multidrug resistance protein family IPR000390 Small multidrug resistance protein family IPR023740 Spermidine export protein MdtJ IPR004753 Cell shape determining protein MreB IPR011055 Duplicated hybrid motif IPR036878 Glucose permease domain IIB IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 IPR003352 Phosphotransferase system, EIIC IPR013013 Phosphotransferase system, EIIC component, type 1 IPR001996 Phosphotransferase system, IIB component, type 1 IPR011299 PTS system glucose-specific IIBC component IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component IPR004341 CAT RNA-binding domain IPR036650 CAT RNA-binding domain superfamily IPR011608 PRD domain IPR036634 PRD domain superfamily IPR001550 Transcription antiterminator, conserved site IPR014036 DeoR C-terminal sensor domain IPR001034 DeoR-type HTH domain IPR037171 NagB/RpiA transferase-like IPR018356 Transcription regulator, HTH DeoR-type, conserved site IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal IPR012094 tRNA(Ile)-lysidine synthase IPR012795 tRNA(Ile)-lysidine synthase, N-terminal IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain IPR009057 Homeobox-like domain superfamily IPR018060 DNA binding HTH domain, AraC-type IPR018062 HTH domain AraC-type, conserved site IPR007263 Protein of unknown function DUF393 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 IPR004710 Bile acid:sodium symporter IPR038770 Sodium/solute symporter superfamily IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain IPR002528 Multi antimicrobial extrusion protein IPR005904 Hypoxanthine phosphoribosyl transferase IPR000836 Phosphoribosyltransferase domain IPR029057 Phosphoribosyltransferase-like IPR009027 Ribosomal protein L9/RNase H1, N-terminal IPR011320 Ribonuclease H1, N-terminal IPR037056 Ribonuclease H1, N-terminal domain superfamily IPR017290 Ribonuclease H, Bacteroides-type IPR012337 Ribonuclease H-like superfamily IPR036397 Ribonuclease H superfamily IPR016161 Aldehyde/histidinol dehydrogenase IPR016163 Aldehyde dehydrogenase, C-terminal IPR016160 Aldehyde dehydrogenase, cysteine active site IPR029510 Aldehyde dehydrogenase, glutamic acid active site IPR016162 Aldehyde dehydrogenase, N-terminal IPR015590 Aldehyde dehydrogenase domain IPR012394 Aldehyde dehydrogenase NAD(P)-dependent IPR029055 Nucleophile aminohydrolases, N-terminal IPR003370 Chromate transporter IPR003370 Chromate transporter IPR003593 AAA+ ATPase domain IPR041569 AAA ATPase, AAA+ lid domain IPR003959 ATPase, AAA-type, core IPR003960 ATPase, AAA-type, conserved site IPR005936 Peptidase, FtsH IPR027417 P-loop containing nucleoside triphosphate hydrolase IPR011546 Peptidase M41, FtsH extracellular IPR000642 Peptidase M41 IPR037219 Peptidase M41-like IPR006047 Glycosyl hydrolase, family 13, catalytic domain IPR013780 Glycosyl hydrolase, all-beta IPR017853 Glycoside hydrolase superfamily IPR032091 Maltogenic Amylase, C-terminal IPR012769 Trehalose-6-phosphate hydrolase IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IPR012770 Trehalose operon transcriptional repressor IPR000524 Transcription regulator HTH, GntR IPR011663 UbiC transcription regulator-associated IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR001952 Alkaline phosphatase IPR018299 Alkaline phosphatase, active site IPR017850 Alkaline-phosphatase-like, core domain superfamily IPR011251 Luciferase-like domain IPR036661 Luciferase-like domain superfamily IPR019949 Luciferase family oxidoreductase, group 1 IPR004619 Type III pantothenate kinase IPR001279 Metallo-beta-lactamase IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPR011701 Major facilitator superfamily IPR020846 Major facilitator superfamily domain IPR036259 MFS transporter superfamily IPR002528 Multi antimicrobial extrusion protein IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPR036291 NAD(P)-binding domain superfamily IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain IPR000304 Pyrroline-5-carboxylate reductase IPR025548 YfkD-like protein IPR013785 Aldolase-type TIM barrel IPR007197 Radical SAM IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB IPR014866 YfkB-like domain IPR000397 Heat shock protein Hsp33 IPR016154 Heat shock protein Hsp33, C-terminal IPR016153 Heat shock protein Hsp33, N-terminal IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily IPR011167 Iron-dependent fumarate hydratase IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel IPR002509 NodB homology domain IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA IPR030390 RNA methyltransferase TrmA, active site IPR012340 Nucleic acid-binding, OB-fold IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPR002792 TRAM domain IPR010280 (Uracil-5)-methyltransferase family IPR007374 ASCH domain IPR009326 Protein of unknown function DUF984 IPR015947 PUA-like superfamily IPR013320 Concanavalin A-like lectin/glucanase domain superfamily IPR013319 Glycoside hydrolase family 11/12 IPR018208 Glycoside hydrolase family 11, active site 1 IPR033119 Glycoside hydrolase family 11, active site 2 IPR033123 Glycosyl hydrolases family 11 (GH11) domain IPR001137 Glycoside hydrolase family 11 IPR016187 C-type lectin fold IPR005532 Sulfatase-modifying factor enzyme IPR042095 Sulfatase-modifying factor enzyme superfamily IPR005856 Cysteine synthase IPR005859 Cysteine synthase CysK IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site IPR001926 Pyridoxal-phosphate dependent enzyme IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IPR006377 Catabolite control protein A IPR000843 LacI-type HTH domain IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPR028082 Periplasmic binding protein-like I IPR000763 Catalase-peroxidase haem IPR002016 Haem peroxidase IPR010255 Haem peroxidase superfamily IPR019794 Peroxidase, active site IPR019793 Peroxidases heam-ligand binding site IPR029035 DHS-like NAD/FAD-binding domain superfamily IPR003000 Sirtuin family IPR026591 Sirtuin, catalytic core small domain superfamily IPR028628 Sirtuin, class U IPR026590 Sirtuin family, catalytic core domain IPR036095 PTS system IIB component-like superfamily IPR003501 Phosphotransferase system, EIIB component, type 2/3 IPR013012 Phosphotransferase system, EIIB component, type 3 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily IPR003352 Phosphotransferase system, EIIC IPR004501 Phosphotransferase system, EIIC component, type 3 IPR004796 Phosphotransferase system, cellobiose-type IIC component IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel IPR006879 Carbohydrate deacetylase YdjC-like IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IPR000524 Transcription regulator HTH, GntR IPR011663 UbiC transcription regulator-associated IPR036388 Winged helix-like DNA-binding domain superfamily IPR036390 Winged helix DNA-binding domain superfamily IPR003610 Carbohydrate-binding module family 5/12 IPR036573 Carbohydrate-binding module superfamily 5/12 IPR011583 Chitinase II IPR029070 Chitinase insertion domain superfamily IPR003961 Fibronectin type III IPR036116 Fibronectin type III superfamily IPR001223 Glycoside hydrolase family 18, catalytic domain IPR001579 Glycoside hydrolase, chitinase active site IPR017853 Glycoside hydrolase superfamily IPR013783 Immunoglobulin-like fold IPR010462 Ectoine synthase IPR014710 RmlC-like jelly roll fold IPR011051 RmlC-like cupin domain superfamily IPR005814 Aminotransferase class-III IPR004637 2,4-diaminobutyrate 4-transaminase IPR012773 Ectoine biosynthetic protein IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR016181 Acyl-CoA N-acyltransferase IPR012772 L-2,4-diaminobutyric acid acetyltransferase IPR000182 GNAT domain IPR005801 ADC synthase IPR019999 Anthranilate synthase component I-like IPR006805 Anthranilate synthase component I, N-terminal IPR015890 Chorismate-utilising enzyme, C-terminal IPR003783 Regulatory protein RecX IPR036388 Winged helix-like DNA-binding domain superfamily IPR014938 Protein of unknown function DUF1811 IPR036289 Hypothetical protein YfhH IPR012611 Small acid-soluble spore protein, SspK IPR007404 LexA-binding, inner membrane-associated putative hydrolase IPR029062 Class I glutamine amidotransferase-like IPR017926 Glutamine amidotransferase IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain IPR005760 A/G-specific adenine glycosylase MutY IPR011257 DNA glycosylase IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif IPR003265 HhH-GPD domain IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal IPR029119 MutY, C-terminal IPR015797 NUDIX hydrolase-like domain superfamily IPR013149 Alcohol dehydrogenase, C-terminal IPR013154 Alcohol dehydrogenase, N-terminal IPR011032 GroES-like superfamily IPR036291 NAD(P)-binding domain superfamily IPR020843 Polyketide synthase, enoylreductase domain IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site IPR004839 Aminotransferase, class I/classII IPR019881 Diaminopimelate aminotransferase, DapL, Desulfovibrio-type IPR019942 LL-diaminopimelate aminotransferase/aminotransferase ALD1 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site IPR015424 Pyridoxal phosphate-dependent transferase IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPR036291 NAD(P)-binding domain superfamily IPR002347 Short-chain dehydrogenase/reductase SDR IPR007295 Domain of unknown function DUF402 IPR035930 FomD-like superfamily IPR016882 Uncharacterised protein family UPF0374