locus-tag	class	description
JYG31_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JYG31_00010	COG0592	DNA-directed DNA polymerase activity
JYG31_00015	COG2501	S4 domain
JYG31_00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JYG31_00030	COG0187	DNA topoisomerase II activity
JYG31_00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JYG31_00070	COG0516	GMP reductase activity
JYG31_00070	COG0517	IMP dehydrogenase activity
JYG31_00075	COG1686	Belongs to the peptidase S11 family
JYG31_00085	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
JYG31_00090	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JYG31_00100	COG1428	Deoxynucleoside kinase
JYG31_00105	COG1428	Deoxynucleoside kinase
JYG31_00110	COG1388	LysM domain
JYG31_00110	COG3858	chitin binding
JYG31_00115	COG1335	isochorismatase
JYG31_00120	COG0590	tRNA wobble adenosine to inosine editing
JYG31_00130	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JYG31_00135	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JYG31_00140	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JYG31_00185	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
JYG31_00190	COG3853	Toxic anion resistance protein (TelA)
JYG31_00195	COG1982	Orn Lys Arg decarboxylase major
JYG31_00200	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JYG31_00205	COG3870	Protein conserved in bacteria
JYG31_00210	COG1728	Protein conserved in bacteria
JYG31_00215	COG0470	DNA polymerase III
JYG31_00220	COG1774	PSP1 C-terminal conserved region
JYG31_00230	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
JYG31_00235	COG2827	Endonuclease containing a URI domain
JYG31_00240	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JYG31_00245	COG2002	toxin-antitoxin pair type II binding
JYG31_00250	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JYG31_00250	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JYG31_00255	COG0084	hydrolase, TatD family'
JYG31_00260	COG3583	domain protein
JYG31_00260	COG3584	3D domain protein
JYG31_00265	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JYG31_00270	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
JYG31_00280	COG4466	Protein conserved in bacteria
JYG31_00290	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
JYG31_00295	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JYG31_00300	COG0251	oxidation-reduction process
JYG31_00305	COG2088	sporulation resulting in formation of a cellular spore
JYG31_00310	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JYG31_00315	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JYG31_00320	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
JYG31_00325	COG0193	aminoacyl-tRNA hydrolase activity
JYG31_00335	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JYG31_00340	COG2002	toxin-antitoxin pair type II binding
JYG31_00345	COG2244	polysaccharide biosynthetic process
JYG31_00350	COG3956	TIGRFAM MazG family protein
JYG31_00355	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JYG31_00370	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
JYG31_00375	COG1098	S1 RNA binding domain
JYG31_00390	COG2208	phosphoserine phosphatase activity
JYG31_00395	COG2304	oxidoreductase activity
JYG31_00400	COG0515	serine threonine protein kinase
JYG31_00405	COG0037	tRNA processing
JYG31_00410	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JYG31_00415	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JYG31_00420	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
JYG31_00425	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
JYG31_00430	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JYG31_00435	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JYG31_00440	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JYG31_00445	COG0512	Glutamine amidotransferase of anthranilate synthase
JYG31_00450	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JYG31_00455	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JYG31_00460	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JYG31_00465	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JYG31_00470	COG1396	sequence-specific DNA binding
JYG31_00475	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JYG31_00480	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
JYG31_00560	COG4463	regulation of RNA biosynthetic process
JYG31_00565	COG3880	PFAM UvrB UvrC protein
JYG31_00570	COG3869	Catalyzes the specific phosphorylation of arginine residues in
JYG31_00575	COG0542	response to heat
JYG31_00580	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JYG31_00585	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
JYG31_00590	COG4956	integral membrane protein (PIN domain superfamily)
JYG31_00595	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
JYG31_00600	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
JYG31_00605	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JYG31_00610	COG1045	serine acetyltransferase
JYG31_00615	COG0215	cysteine-tRNA ligase activity
JYG31_00620	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
JYG31_00625	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JYG31_00630	COG3688	RNA-binding protein containing a PIN domain
JYG31_00635	COG1595	DNA-templated transcription, initiation
JYG31_00645	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JYG31_00650	COG0250	Participates in transcription elongation, termination and antitermination
JYG31_00660	COG0081	regulation of translation
JYG31_00675	COG2813	Specifically methylates the guanine in position
JYG31_00680	COG0085	RNA polymerase activity
JYG31_00685	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JYG31_00690	COG1358	cellular component organization or biogenesis
JYG31_00700	COG0049	tRNA binding
JYG31_00705	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JYG31_00710	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JYG31_00715	COG0596	Alpha beta hydrolase
JYG31_00725	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JYG31_00740	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JYG31_00760	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JYG31_00770	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JYG31_00775	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JYG31_00785	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JYG31_00795	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JYG31_00800	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JYG31_00805	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JYG31_00820	COG0200	Binds to the 23S rRNA
JYG31_00825	COG0201	protein transport
JYG31_00830	COG0563	adenylate kinase activity
JYG31_00835	COG0024	Methionine aminopeptidase
JYG31_00845	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JYG31_00855	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JYG31_00860	COG0202	RNA polymerase activity
JYG31_00865	COG0203	ribosomal protein L17
JYG31_00870	COG1122	ATPase activity
JYG31_00875	COG1122	ATPase activity
JYG31_00880	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JYG31_00885	COG0101	tRNA pseudouridine synthase activity
JYG31_00890	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JYG31_00900	COG2226	methyltransferase
JYG31_00910	COG0860	N-Acetylmuramoyl-L-alanine amidase
JYG31_00915	COG0489	protein tyrosine kinase activity
JYG31_00925	COG2194	sulfuric ester hydrolase activity
JYG31_00930	COG0726	polysaccharide deacetylase
JYG31_01010	COG0659	secondary active sulfate transmembrane transporter activity
JYG31_01015	COG0385	Bile acid
JYG31_01020	COG2819	hydrolase of the alpha beta superfamily
JYG31_01025	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JYG31_01030	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JYG31_01035	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JYG31_01040	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JYG31_01040	COG2207	Transcriptional regulator
JYG31_01045	COG3876	Protein conserved in bacteria
JYG31_01050	COG1472	Belongs to the glycosyl hydrolase 3 family
JYG31_01055	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JYG31_01060	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JYG31_01060	COG1263	PTS System
JYG31_01065	COG1737	Transcriptional regulator
JYG31_01070	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
JYG31_01075	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JYG31_01080	COG1683	Conserved Protein
JYG31_01110	COG1595	DNA-templated transcription, initiation
JYG31_01115	COG5662	AntiSigma factor
JYG31_01120	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JYG31_01125	COG4856	YbbR-like protein
JYG31_01130	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JYG31_01145	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JYG31_01150	COG3002	Belongs to the UPF0753 family
JYG31_01155	COG0288	reversible hydration of carbon dioxide
JYG31_01165	COG5609	conserved protein (DUF2294)
JYG31_01170	COG0640	Transcriptional regulator
JYG31_01175	COG2814	Major facilitator Superfamily
JYG31_01180	COG1413	lyase activity
JYG31_01190	COG0596	Alpha beta hydrolase
JYG31_01195	COG0745	RESPONSE REGULATOR receiver
JYG31_01200	COG0642	Histidine kinase
JYG31_01210	COG0515	serine threonine protein kinase
JYG31_01225	COG1113	amino acid transport
JYG31_01240	COG2602	Beta-lactamase
JYG31_01245	COG2124	cytochrome p450
JYG31_01255	COG0531	amino acid
JYG31_01270	COG0584	glycerophosphoryl diester phosphodiesterase
JYG31_01275	COG2271	Major facilitator Superfamily
JYG31_01285	COG1846	Transcriptional regulator
JYG31_01285	COG0456	acetyltransferase
JYG31_01290	COG2271	Major facilitator Superfamily
JYG31_01305	COG0697	spore germination
JYG31_01310	COG1917	Cupin 2, conserved barrel domain protein
JYG31_01310	COG2207	Transcriptional regulator
JYG31_01335	COG0371	Dehydrogenase
JYG31_01340	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
JYG31_01345	COG3591	Belongs to the peptidase S1B family
JYG31_01355	COG0596	Alpha beta hydrolase
JYG31_01360	COG1183	phosphatidylcholine synthase activity
JYG31_01365	COG0586	Pfam SNARE associated Golgi protein
JYG31_01370	COG0688	phosphatidylethanolamine metabolic process
JYG31_01380	COG2312	Erythromycin esterase
JYG31_01385	COG2207	Transcriptional regulator
JYG31_01390	COG1054	Belongs to the UPF0176 family
JYG31_01395	COG1301	dicarboxylic acid transport
JYG31_01400	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JYG31_01400	COG2190	(PTS) system
JYG31_01400	COG1263	PTS System
JYG31_01405	COG0363	glucosamine-6-phosphate deaminase activity
JYG31_01410	COG2188	Transcriptional regulator
JYG31_01420	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JYG31_01425	COG0833	amino acid
JYG31_01430	COG2040	homocysteine
JYG31_01435	COG1115	amino acid carrier protein
JYG31_01440	COG2066	Belongs to the glutaminase family
JYG31_01445	COG4191	Histidine kinase
JYG31_01450	COG0784	Response regulator, receiver
JYG31_01455	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JYG31_01460	COG1012	belongs to the aldehyde dehydrogenase family
JYG31_01465	COG2271	Major facilitator Superfamily
JYG31_01470	COG4948	Mandelate Racemase Muconate Lactonizing
JYG31_01475	COG2186	Transcriptional regulator
JYG31_01480	COG2721	sulfolactate sulfo-lyase activity
JYG31_01485	COG3173	Aminoglycoside phosphotransferase
JYG31_01495	COG0745	RESPONSE REGULATOR receiver
JYG31_01500	COG2205	protein histidine kinase activity
JYG31_01505	COG1131	(ABC) transporter
JYG31_01525	COG3773	Cell wall hydrolase
JYG31_01530	COG2304	oxidoreductase activity
JYG31_01540	COG3540	Alkaline phosphatase
JYG31_01545	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JYG31_01550	COG0805	protein transport
JYG31_01555	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
JYG31_01560	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JYG31_01565	COG0477	Major facilitator Superfamily
JYG31_01570	COG1309	transcriptional regulator
JYG31_01575	COG0252	asparaginase activity
JYG31_01580	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
JYG31_01585	COG1714	RDD family
JYG31_01590	COG1405	negative regulation of cell septum assembly
JYG31_01590	COG3012	SEC-C Motif Domain Protein
JYG31_01595	COG3290	protein histidine kinase activity
JYG31_01600	COG3279	Response regulator of the LytR AlgR family
JYG31_01605	COG4555	ABC transporter
JYG31_01610	COG1668	transmembrane transport
JYG31_01615	COG0667	Aldo Keto reductase
JYG31_01630	COG1595	DNA-templated transcription, initiation
JYG31_01635	COG1595	DNA-templated transcription, initiation
JYG31_01640	COG1876	peptidase activity
JYG31_01645	COG0457	Tetratricopeptide repeat
JYG31_01650	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_01655	COG0366	Alpha amylase catalytic
JYG31_01660	COG0803	Belongs to the bacterial solute-binding protein 9 family
JYG31_01665	COG1121	(ABC) transporter
JYG31_01670	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JYG31_01675	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JYG31_01680	COG2310	stress, protein
JYG31_01685	COG2310	stress, protein
JYG31_01690	COG2310	stress, protein
JYG31_01695	COG0861	Integral membrane protein TerC family
JYG31_01710	COG1358	cellular component organization or biogenesis
JYG31_01725	COG3853	Toxic anion resistance protein (TelA)
JYG31_01730	COG0477	Major facilitator Superfamily
JYG31_01735	COG2814	Major facilitator Superfamily
JYG31_01740	COG0640	Transcriptional regulator
JYG31_01745	COG0517	IMP dehydrogenase activity
JYG31_01745	COG4175	Glycine betaine
JYG31_01750	COG4176	ABC-type proline glycine betaine transport system permease component
JYG31_01755	COG2113	Glycine betaine
JYG31_01760	COG1473	amidohydrolase
JYG31_01765	COG1288	antiporter activity
JYG31_01775	COG0366	Alpha amylase catalytic
JYG31_01780	COG0039	L-malate dehydrogenase activity
JYG31_01785	COG1620	l-lactate permease
JYG31_01790	COG2814	Major facilitator Superfamily
JYG31_01795	COG1846	Transcriptional regulator
JYG31_01800	COG1280	lysine exporter protein (LysE YggA)
JYG31_01805	COG3403	YqcI/YcgG family
JYG31_01810	COG1113	amino acid transport
JYG31_01815	COG3665	Urea carboxylase-associated protein
JYG31_01820	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
JYG31_01825	COG1660	Displays ATPase and GTPase activities
JYG31_01835	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JYG31_01840	COG2226	methyltransferase
JYG31_01845	COG0583	DNA-binding transcription factor activity
JYG31_01850	COG3458	cephalosporin-C deacetylase activity
JYG31_01855	COG3541	Predicted nucleotidyltransferase
JYG31_01860	COG0506	proline dehydrogenase activity
JYG31_01865	COG1012	belongs to the aldehyde dehydrogenase family
JYG31_01870	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JYG31_01875	COG2508	Transcriptional regulator
JYG31_01880	COG3689	TIGRFAM TIGR03943 family protein
JYG31_01885	COG0701	Predicted permease
JYG31_01890	COG0492	ferredoxin-NADP+ reductase activity
JYG31_01895	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JYG31_01895	COG1587	Uroporphyrinogen-III synthase
JYG31_01900	COG2146	nitrite reductase [NAD(P)H] activity
JYG31_01905	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JYG31_01910	COG0243	molybdopterin cofactor binding
JYG31_01915	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JYG31_01920	COG2223	nitrite transmembrane transporter activity
JYG31_01925	COG1469	GTP cyclohydrolase I activity
JYG31_01930	COG1376	ErfK ybiS ycfS ynhG family protein
JYG31_01940	COG0523	cobalamin synthesis protein
JYG31_01945	COG0765	amino acid transport
JYG31_01950	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JYG31_01955	COG1063	alcohol dehydrogenase
JYG31_01985	COG1846	Transcriptional regulator
JYG31_01995	COG3842	ATPase activity
JYG31_02000	COG2723	6-phospho-beta-galactosidase activity
JYG31_02010	COG3209	COG3209 Rhs family protein
JYG31_02015	COG3290	protein histidine kinase activity
JYG31_02015	COG0840	transmembrane signaling receptor activity
JYG31_02020	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
JYG31_02025	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
JYG31_02030	COG1733	regulation of RNA biosynthetic process
JYG31_02035	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JYG31_02040	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JYG31_02045	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JYG31_02050	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
JYG31_02055	COG2814	Major facilitator Superfamily
JYG31_02065	COG0697	spore germination
JYG31_02070	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JYG31_02080	COG2364	Membrane
JYG31_02085	COG1126	abc transporter atp-binding protein
JYG31_02090	COG0765	amino acid transport
JYG31_02095	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JYG31_02100	COG0583	DNA-binding transcription factor activity
JYG31_02105	COG0163	prenyltransferase activity
JYG31_02110	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JYG31_02125	COG0596	Alpha beta hydrolase
JYG31_02130	COG3104	oligopeptide transport
JYG31_02135	COG5434	Belongs to the glycosyl hydrolase 28 family
JYG31_02145	COG0697	spore germination
JYG31_02155	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JYG31_02160	COG1136	(ABC) transporter
JYG31_02165	COG0577	efflux transmembrane transporter activity
JYG31_02170	COG0745	RESPONSE REGULATOR receiver
JYG31_02175	COG3850	Histidine kinase
JYG31_02175	COG5002	protein histidine kinase activity
JYG31_02180	COG0457	Tetratricopeptide repeat
JYG31_02200	COG0527	aspartate kinase activity
JYG31_02205	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JYG31_02210	COG4605	iron ion homeostasis
JYG31_02215	COG4604	ABC transporter, ATP-binding protein
JYG31_02220	COG4607	ABC-type enterochelin transport system periplasmic component
JYG31_02225	COG2814	Major facilitator Superfamily
JYG31_02230	COG1309	transcriptional regulator
JYG31_02235	COG0778	Nitroreductase
JYG31_02240	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
JYG31_02245	COG0640	Transcriptional regulator
JYG31_02250	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JYG31_02255	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JYG31_02260	COG1012	belongs to the aldehyde dehydrogenase family
JYG31_02265	COG4975	Glucose uptake
JYG31_02270	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_02275	COG4549	nuclear export factor GLE1
JYG31_02280	COG2372	response to copper ion
JYG31_02280	COG1276	copper resistance
JYG31_02285	COG1349	DNA-binding transcription factor activity
JYG31_02295	COG2213	PTS system mannitol-specific
JYG31_02300	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JYG31_02305	COG0246	Mannitol dehydrogenase
JYG31_02310	COG0473	3-isopropylmalate dehydrogenase activity
JYG31_02320	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JYG31_02330	COG0561	phosphatase activity
JYG31_02335	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
JYG31_02340	COG1914	H( )-stimulated, divalent metal cation uptake system
JYG31_02345	COG4336	lyase activity
JYG31_02350	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
JYG31_02355	COG1984	allophanate hydrolase subunit 2
JYG31_02360	COG1414	Transcriptional regulator
JYG31_02365	COG2755	lipolytic protein G-D-S-L family
JYG31_02375	COG2329	Antibiotic biosynthesis monooxygenase
JYG31_02380	COG0768	penicillin binding
JYG31_02385	COG4989	oxidoreductase activity
JYG31_02390	COG3711	transcriptional antiterminator
JYG31_02395	COG0318	PFAM AMP-dependent synthetase and ligase
JYG31_02400	COG2226	methyltransferase
JYG31_02405	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_02410	COG1917	Cupin 2, conserved barrel domain protein
JYG31_02415	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JYG31_02420	COG3871	stress protein (general stress protein 26)
JYG31_02430	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JYG31_02435	COG2814	Major facilitator Superfamily
JYG31_02440	COG1522	sequence-specific DNA binding
JYG31_02445	COG0551	DNA topoisomerase type I activity
JYG31_02445	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JYG31_02450	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
JYG31_02455	COG3706	GGDEF domain
JYG31_02460	COG5298	Protein conserved in bacteria
JYG31_02465	COG1215	transferase activity, transferring glycosyl groups
JYG31_02475	COG0531	amino acid
JYG31_02480	COG0494	nUDIX hydrolase
JYG31_02485	COG0028	Belongs to the TPP enzyme family
JYG31_02495	COG1914	H( )-stimulated, divalent metal cation uptake system
JYG31_02500	COG2261	transglycosylase associated protein
JYG31_02505	COG4876	unkown
JYG31_02510	COG2217	Heavy metal translocating P-type atpase
JYG31_02515	COG3729	General stress protein
JYG31_02520	COG0662	Cupin 2, conserved barrel domain protein
JYG31_02525	COG2329	Antibiotic biosynthesis monooxygenase
JYG31_02530	COG3546	catalase activity
JYG31_02535	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JYG31_02540	COG3290	protein histidine kinase activity
JYG31_02545	COG4565	transcriptional regulatory protein
JYG31_02550	COG1301	dicarboxylic acid transport
JYG31_02555	COG0628	permease
JYG31_02560	COG1301	dicarboxylic acid transport
JYG31_02565	COG1131	(ABC) transporter
JYG31_02570	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JYG31_02580	COG1960	acyl-CoA dehydrogenase activity
JYG31_02595	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JYG31_02600	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JYG31_02605	COG1181	Belongs to the D-alanine--D-alanine ligase family
JYG31_02610	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JYG31_02615	COG0513	Belongs to the DEAD box helicase family
JYG31_02620	COG3402	PFAM membrane-flanked domain
JYG31_02625	COG3428	Bacterial PH domain
JYG31_02630	COG0705	Rhomboid family
JYG31_02635	COG0736	holo-[acyl-carrier-protein] synthase activity
JYG31_02640	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
JYG31_02645	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JYG31_02650	COG0864	Transcriptional regulator
JYG31_02655	COG2337	Toxic component of a toxin-antitoxin (TA) module
JYG31_02660	COG1366	Belongs to the anti-sigma-factor antagonist family
JYG31_02665	COG1366	Belongs to the anti-sigma-factor antagonist family
JYG31_02670	COG2172	sigma factor antagonist activity
JYG31_02675	COG2208	phosphoserine phosphatase activity
JYG31_02680	COG1366	Belongs to the anti-sigma-factor antagonist family
JYG31_02685	COG2172	sigma factor antagonist activity
JYG31_02690	COG1191	sigma factor activity
JYG31_02695	COG2208	phosphoserine phosphatase activity
JYG31_02710	COG1846	Transcriptional regulator
JYG31_02715	COG2183	response to ionizing radiation
JYG31_02725	COG3091	SprT-like family
JYG31_02780	COG2249	NAD(P)H dehydrogenase (quinone) activity
JYG31_02825	COG2807	transmembrane transport
JYG31_02835	COG3239	Fatty acid desaturase
JYG31_02840	COG1278	Cold shock
JYG31_02845	COG1278	Cold shock
JYG31_02855	COG1329	Transcriptional regulator
JYG31_02860	COG2315	Protein conserved in bacteria
JYG31_02865	COG0346	lactoylglutathione lyase activity
JYG31_02885	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
JYG31_02895	COG2364	Membrane
JYG31_02900	COG1846	Transcriptional regulator
JYG31_02905	COG0456	acetyltransferase
JYG31_02910	COG2808	Putative FMN-binding domain
JYG31_02925	COG0693	protein deglycase activity
JYG31_02930	COG4978	Transcriptional regulator
JYG31_02930	COG0789	Transcriptional regulator
JYG31_02940	COG0697	spore germination
JYG31_02945	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JYG31_02955	COG3545	Serine hydrolase
JYG31_02960	COG1733	regulation of RNA biosynthetic process
JYG31_02965	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JYG31_02975	COG0456	acetyltransferase
JYG31_02980	COG3711	transcriptional antiterminator
JYG31_02980	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JYG31_02985	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JYG31_02985	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JYG31_02985	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JYG31_02990	COG1482	cell wall glycoprotein biosynthetic process
JYG31_02995	COG2030	dehydratase
JYG31_03000	COG0697	spore germination
JYG31_03005	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JYG31_03010	COG0596	Alpha beta hydrolase
JYG31_03015	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JYG31_03020	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JYG31_03025	COG1522	sequence-specific DNA binding
JYG31_03030	COG2323	membrane
JYG31_03035	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JYG31_03040	COG1309	transcriptional regulator
JYG31_03050	COG0456	acetyltransferase
JYG31_03060	COG0673	inositol 2-dehydrogenase activity
JYG31_03065	COG1609	Transcriptional regulator
JYG31_03070	COG2814	Major facilitator Superfamily
JYG31_03075	COG1082	Xylose isomerase domain protein TIM barrel
JYG31_03080	COG0488	(ABC) transporter
JYG31_03085	COG1113	amino acid transport
JYG31_03090	COG2318	DinB family
JYG31_03095	COG1846	Transcriptional regulator
JYG31_03100	COG1033	growth of symbiont in host cell
JYG31_03100	COG2409	Drug exporters of the RND superfamily
JYG31_03105	COG0778	Nitroreductase
JYG31_03110	COG1846	Transcriptional regulator
JYG31_03115	COG1396	sequence-specific DNA binding
JYG31_03120	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
JYG31_03130	COG2814	Major facilitator Superfamily
JYG31_03135	COG0730	response to heat
JYG31_03140	COG1802	Transcriptional regulator
JYG31_03145	COG1388	LysM domain
JYG31_03145	COG3858	chitin binding
JYG31_03150	COG1819	glycosyl
JYG31_03165	COG1785	Belongs to the alkaline phosphatase family
JYG31_03180	COG1078	dGTPase activity
JYG31_03185	COG1388	LysM domain
JYG31_03190	COG2814	Major facilitator Superfamily
JYG31_03195	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JYG31_03200	COG1447	Phosphotransferase system cellobiose-specific component IIA
JYG31_03205	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JYG31_03210	COG2723	6-phospho-beta-galactosidase activity
JYG31_03215	COG2188	Transcriptional regulator
JYG31_03220	COG1940	carbohydrate kinase activity
JYG31_03225	COG1482	cell wall glycoprotein biosynthetic process
JYG31_03230	COG4124	Belongs to the glycosyl hydrolase 26 family
JYG31_03275	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
JYG31_03280	COG0802	atpase or kinase
JYG31_03285	COG1214	PFAM Peptidase M22, glycoprotease
JYG31_03290	COG0456	acetyltransferase
JYG31_03295	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JYG31_03300	COG0488	(ABC) transporter
JYG31_03305	COG0315	cyclic pyranopterin monophosphate synthase activity
JYG31_03310	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
JYG31_03315	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JYG31_03320	COG0805	protein transport
JYG31_03330	COG1266	CAAX protease self-immunity
JYG31_03360	COG0732	type I restriction modification DNA specificity domain
JYG31_03365	COG0732	type I restriction modification DNA specificity domain
JYG31_03375	COG0457	Tetratricopeptide repeat
JYG31_03380	COG1063	alcohol dehydrogenase
JYG31_03385	COG2211	Major facilitator Superfamily
JYG31_03390	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JYG31_03400	COG2814	Major facilitator Superfamily
JYG31_03405	COG1063	alcohol dehydrogenase
JYG31_03410	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JYG31_03415	COG0823	Involved in the tonB-independent uptake of proteins
JYG31_03430	COG2267	carboxylic ester hydrolase activity
JYG31_03440	COG2132	Multicopper oxidase
JYG31_03445	COG1113	amino acid transport
JYG31_03450	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JYG31_03455	COG0714	Associated with various cellular activities
JYG31_03460	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
JYG31_03465	COG1305	Transglutaminase-like
JYG31_03470	COG0519	Catalyzes the synthesis of GMP from XMP
JYG31_03470	COG0518	GMP synthase (glutamine-hydrolyzing) activity
JYG31_03475	COG2252	PERMEase
JYG31_03480	COG3064	Membrane
JYG31_03490	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
JYG31_03500	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JYG31_03505	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JYG31_03510	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JYG31_03515	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
JYG31_03520	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JYG31_03525	COG0047	phosphoribosylformylglycinamidine synthase activity
JYG31_03530	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JYG31_03535	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JYG31_03540	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
JYG31_03545	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JYG31_03550	COG0138	bifunctional purine biosynthesis protein purh
JYG31_03555	COG0151	Belongs to the GarS family
JYG31_03560	COG1522	sequence-specific DNA binding
JYG31_03565	COG0531	amino acid
JYG31_03575	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
JYG31_03580	COG1470	cell adhesion involved in biofilm formation
JYG31_03585	COG4496	protein, YerC YecD
JYG31_03595	COG0069	glutamate synthase activity
JYG31_03600	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
JYG31_03605	COG0210	DNA helicase
JYG31_03610	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JYG31_03615	COG4851	CamS sex pheromone cAM373 precursor
JYG31_03620	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JYG31_03625	COG1285	pathogenesis
JYG31_03630	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JYG31_03635	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JYG31_03640	COG0154	amidase activity
JYG31_03645	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JYG31_03650	COG1309	transcriptional regulator
JYG31_03655	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JYG31_03660	COG1597	lipid kinase activity
JYG31_03665	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JYG31_03695	COG0457	Tetratricopeptide repeat
JYG31_03725	COG5444	nuclease activity
JYG31_03730	COG3391	amine dehydrogenase activity
JYG31_03735	COG0457	Tetratricopeptide repeat
JYG31_03745	COG0217	transcriptional regulatory protein
JYG31_03755	COG1309	transcriptional regulator
JYG31_03760	COG3631	Ketosteroid isomerase-related protein
JYG31_03765	COG0702	epimerase
JYG31_03770	COG2159	amidohydrolase
JYG31_03775	COG1309	transcriptional regulator
JYG31_03790	COG3546	catalase activity
JYG31_03795	COG0454	-acetyltransferase
JYG31_03805	COG5578	integral membrane protein
JYG31_03810	COG2972	Histidine kinase
JYG31_03815	COG2207	Transcriptional regulator
JYG31_03815	COG4753	response regulator
JYG31_03820	COG1653	transport
JYG31_03825	COG1175	transmembrane transport
JYG31_03830	COG0395	ABC-type sugar transport system, permease component
JYG31_03835	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
JYG31_03840	COG2207	Transcriptional regulator
JYG31_03845	COG2755	lipolytic protein G-D-S-L family
JYG31_03855	COG5578	integral membrane protein
JYG31_03860	COG3401	FG-GAP repeat protein
JYG31_03865	COG3401	FG-GAP repeat protein
JYG31_03870	COG0667	Aldo Keto reductase
JYG31_03875	COG2755	lipolytic protein G-D-S-L family
JYG31_03880	COG1874	Beta-galactosidase
JYG31_03890	COG1653	transport
JYG31_03895	COG4209	transmembrane transport
JYG31_03900	COG0395	ABC-type sugar transport system, permease component
JYG31_03905	COG1486	melibiose metabolic process
JYG31_03910	COG2323	membrane
JYG31_03915	COG2329	Antibiotic biosynthesis monooxygenase
JYG31_03920	COG0346	lactoylglutathione lyase activity
JYG31_03930	COG1366	Belongs to the anti-sigma-factor antagonist family
JYG31_03935	COG5583	Uncharacterized small protein (DUF2292)
JYG31_03940	COG0670	Belongs to the BI1 family
JYG31_03945	COG1846	Transcriptional regulator
JYG31_03950	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JYG31_03960	COG2124	cytochrome p450
JYG31_03960	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JYG31_03965	COG1368	sulfuric ester hydrolase activity
JYG31_03970	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
JYG31_03975	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JYG31_03980	COG1442	glycosyl transferase family 8
JYG31_03985	COG1216	Glycosyl transferase, family 2
JYG31_03990	COG1442	glycosyl transferase family 8
JYG31_03995	COG2223	nitrite transmembrane transporter activity
JYG31_04000	COG1011	Hydrolase
JYG31_04005	COG0531	amino acid
JYG31_04010	COG1012	belongs to the aldehyde dehydrogenase family
JYG31_04015	COG0840	transmembrane signaling receptor activity
JYG31_04020	COG0488	(ABC) transporter
JYG31_04030	COG0789	Transcriptional regulator
JYG31_04035	COG2814	Major facilitator Superfamily
JYG31_04045	COG0488	(ABC) transporter
JYG31_04050	COG0513	Belongs to the DEAD box helicase family
JYG31_04055	COG0456	acetyltransferase
JYG31_04060	COG2130	NADP-dependent
JYG31_04065	COG1120	ATPase activity
JYG31_04070	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JYG31_04075	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JYG31_04080	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
JYG31_04095	COG3866	Pectate lyase
JYG31_04100	COG0471	metal ion transport
JYG31_04120	COG0463	Glycosyl transferase, family 2
JYG31_04130	COG3290	protein histidine kinase activity
JYG31_04135	COG4565	transcriptional regulatory protein
JYG31_04140	COG3181	Tripartite tricarboxylate transporter family receptor
JYG31_04145	COG2851	Citrate transporter
JYG31_04150	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JYG31_04155	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
JYG31_04160	COG1254	Belongs to the acylphosphatase family
JYG31_04165	COG2258	MOSC domain
JYG31_04185	COG0024	Methionine aminopeptidase
JYG31_04190	COG1263	PTS System
JYG31_04190	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JYG31_04195	COG1368	sulfuric ester hydrolase activity
JYG31_04205	COG1115	amino acid carrier protein
JYG31_04210	COG1263	PTS System
JYG31_04210	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JYG31_04215	COG0366	Alpha amylase catalytic
JYG31_04220	COG2188	Transcriptional regulator
JYG31_04225	COG0778	Nitroreductase
JYG31_04230	COG0737	Belongs to the 5'-nucleotidase family
JYG31_04235	COG0693	protein deglycase activity
JYG31_04240	COG2814	Major facilitator Superfamily
JYG31_04245	COG4840	Belongs to the UPF0435 family
JYG31_04250	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JYG31_04255	COG4980	gas vesicle protein
JYG31_04260	COG1295	ribonuclease BN
JYG31_04265	COG0477	Major facilitator Superfamily
JYG31_04270	COG0387	Pfam Sodium calcium exchanger
JYG31_04280	COG0668	transmembrane transport
JYG31_04285	COG0535	radical SAM domain protein
JYG31_04295	COG0726	polysaccharide deacetylase
JYG31_04300	COG2084	Dehydrogenase
JYG31_04305	COG0598	Magnesium transport protein CorA
JYG31_04310	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
JYG31_04315	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JYG31_04320	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JYG31_04330	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
JYG31_04345	COG4637	Psort location Cytoplasmic, score
JYG31_04355	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JYG31_04360	COG0022	dehydrogenase e1 component
JYG31_04365	COG0508	dehydrogenase complex catalyzes the overall conversion of
JYG31_04370	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JYG31_04375	COG3284	Transcriptional regulator
JYG31_04385	COG1742	UPF0060 membrane protein
JYG31_04410	COG4842	Belongs to the WXG100 family
JYG31_04415	COG1486	melibiose metabolic process
JYG31_04420	COG1737	Transcriptional regulator
JYG31_04425	COG1263	PTS System
JYG31_04425	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JYG31_04430	COG1132	(ABC) transporter
JYG31_04435	COG1132	(ABC) transporter
JYG31_04440	COG2259	Doxx family
JYG31_04445	COG2514	catechol 2,3-dioxygenase activity
JYG31_04450	COG4585	Histidine kinase
JYG31_04455	COG2197	response regulator
JYG31_04460	COG1131	(ABC) transporter
JYG31_04465	COG1511	domain protein
JYG31_04465	COG0842	Transport permease protein
JYG31_04470	COG0842	Transport permease protein
JYG31_04475	COG1695	Transcriptional regulator
JYG31_04480	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
JYG31_04485	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
JYG31_04490	COG1309	transcriptional regulator
JYG31_04495	COG2814	Major facilitator Superfamily
JYG31_04500	COG2318	DinB family
JYG31_04505	COG2814	Major facilitator Superfamily
JYG31_04510	COG1846	Transcriptional regulator
JYG31_04515	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JYG31_04515	COG0392	lysyltransferase activity
JYG31_04520	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JYG31_04525	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JYG31_04530	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JYG31_04535	COG0384	phenazine biosynthesis protein PhzF
JYG31_04540	COG0778	Nitroreductase
JYG31_04555	COG1090	epimerase
JYG31_04560	COG2137	regulation of response to DNA damage stimulus
JYG31_04570	COG2814	Major facilitator Superfamily
JYG31_04590	COG1476	TRANSCRIPTIONal
JYG31_04595	COG3103	Sh3 type 3 domain protein
JYG31_04600	COG5658	integral membrane protein
JYG31_04605	COG0596	Alpha beta hydrolase
JYG31_04610	COG0463	Glycosyl transferase, family 2
JYG31_04615	COG4485	Bacterial membrane protein, YfhO
JYG31_04620	COG1988	membrane-bound metal-dependent
JYG31_04625	COG1194	a g-specific adenine glycosylase
JYG31_04635	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_04650	COG3557	Belongs to the UPF0374 family
JYG31_04655	COG1132	(ABC) transporter
JYG31_04660	COG4129	membrane
JYG31_04665	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
JYG31_04670	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JYG31_04675	COG0735	belongs to the Fur family
JYG31_04805	COG4326	sporulation control protein
JYG31_04815	COG1063	alcohol dehydrogenase
JYG31_04820	COG5577	PFAM Coat F domain
JYG31_04830	COG3340	Belongs to the peptidase S51 family
JYG31_04835	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
JYG31_04845	COG0753	catalase activity
JYG31_04850	COG1116	anion transmembrane transporter activity
JYG31_04855	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JYG31_04860	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JYG31_04865	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JYG31_04875	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JYG31_04885	COG1476	TRANSCRIPTIONal
JYG31_04895	COG3382	B3 4 domain protein
JYG31_04900	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JYG31_04910	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JYG31_04915	COG0789	Transcriptional regulator
JYG31_04920	COG1664	Polymer-forming cytoskeletal
JYG31_04925	COG1664	Polymer-forming cytoskeletal
JYG31_04930	COG2766	serine protein kinase
JYG31_04935	COG2718	Belongs to the UPF0229 family
JYG31_04940	COG1846	Transcriptional regulator
JYG31_04945	COG1566	PFAM secretion protein HlyD family protein
JYG31_04950	COG2814	Major facilitator Superfamily
JYG31_04955	COG0655	NAD(P)H dehydrogenase (quinone) activity
JYG31_04970	COG1725	Transcriptional regulator
JYG31_04975	COG1131	(ABC) transporter
JYG31_04980	COG1131	(ABC) transporter
JYG31_04985	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JYG31_04990	COG1278	Cold shock
JYG31_04995	COG1464	Belongs to the NlpA lipoprotein family
JYG31_05000	COG3706	GGDEF domain
JYG31_05005	COG1823	symporter activity
JYG31_05025	COG5577	PFAM Coat F domain
JYG31_05030	COG0737	Belongs to the 5'-nucleotidase family
JYG31_05030	COG1525	nuclease
JYG31_05030	COG4085	toxin activity
JYG31_05035	COG3764	Sortase (surface protein transpeptidase)
JYG31_05045	COG0564	pseudouridine synthase activity
JYG31_05055	COG0517	IMP dehydrogenase activity
JYG31_05060	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JYG31_05065	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JYG31_05065	COG3153	acetyltransferase
JYG31_05075	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JYG31_05080	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
JYG31_05085	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JYG31_05090	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JYG31_05095	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JYG31_05100	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JYG31_05105	COG2203	Gaf domain
JYG31_05105	COG4585	Histidine kinase
JYG31_05110	COG2197	response regulator
JYG31_05115	COG0431	NADPH-dependent FMN reductase
JYG31_05130	COG1388	LysM domain
JYG31_05130	COG0791	NLP P60 protein
JYG31_05135	COG1959	2 iron, 2 sulfur cluster binding
JYG31_05140	COG0668	transmembrane transport
JYG31_05145	COG2719	SpoVR family
JYG31_05150	COG1785	Belongs to the alkaline phosphatase family
JYG31_05155	COG0791	NLP P60 protein
JYG31_05155	COG1388	LysM domain
JYG31_05160	COG0583	DNA-binding transcription factor activity
JYG31_05165	COG0372	Belongs to the citrate synthase family
JYG31_05170	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_05175	COG0531	amino acid
JYG31_05180	COG0733	neurotransmitter:sodium symporter activity
JYG31_05185	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JYG31_05190	COG0456	acetyltransferase
JYG31_05205	COG1595	DNA-templated transcription, initiation
JYG31_05210	COG0667	Aldo Keto reductase
JYG31_05215	COG0204	Acyl-transferase
JYG31_05220	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JYG31_05225	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JYG31_05230	COG1253	flavin adenine dinucleotide binding
JYG31_05235	COG0789	Transcriptional regulator
JYG31_05240	COG0436	Aminotransferase
JYG31_05250	COG1253	flavin adenine dinucleotide binding
JYG31_05255	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JYG31_05260	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JYG31_05265	COG0584	glycerophosphoryl diester phosphodiesterase
JYG31_05275	COG0668	transmembrane transport
JYG31_05280	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JYG31_05285	COG0726	polysaccharide deacetylase
JYG31_05290	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JYG31_05295	COG1757	Na H antiporter
JYG31_05300	COG0589	response to stress
JYG31_05305	COG1132	(ABC) transporter
JYG31_05310	COG1132	(ABC) transporter
JYG31_05315	COG0702	epimerase
JYG31_05335	COG0189	ligase activity
JYG31_05340	COG0189	ligase activity
JYG31_05345	COG4399	Belongs to the UPF0754 family
JYG31_05350	COG3679	Belongs to the UPF0342 family
JYG31_05360	COG0561	phosphatase activity
JYG31_05365	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JYG31_05370	COG0475	glutathione-regulated potassium exporter activity
JYG31_05375	COG0490	domain, Protein
JYG31_05385	COG1024	Enoyl-CoA hydratase
JYG31_05395	COG4152	abc transporter atp-binding protein
JYG31_05400	COG1668	transmembrane transport
JYG31_05405	COG0420	3'-5' exonuclease activity
JYG31_05410	COG4717	serine-type aminopeptidase activity
JYG31_05415	COG3481	metal-dependent phosphohydrolase, HD sub domain
JYG31_05425	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JYG31_05455	COG1846	Transcriptional regulator
JYG31_05460	COG4980	gas vesicle protein
JYG31_05475	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
JYG31_05480	COG0537	adenosine 5'-monophosphoramidase activity
JYG31_05485	COG1131	(ABC) transporter
JYG31_05490	COG4473	ABC transporter
JYG31_05500	COG1473	amidohydrolase
JYG31_05505	COG3069	C4-dicarboxylate transmembrane transporter activity
JYG31_05515	COG2329	Antibiotic biosynthesis monooxygenase
JYG31_05520	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JYG31_05525	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
JYG31_05530	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
JYG31_05535	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
JYG31_05540	COG1309	transcriptional regulator
JYG31_05545	COG1511	domain protein
JYG31_05550	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JYG31_05555	COG4377	Putative membrane peptidase family (DUF2324)
JYG31_05560	COG1363	Peptidase, m42
JYG31_05565	COG4405	Protein conserved in bacteria
JYG31_05570	COG1301	dicarboxylic acid transport
JYG31_05580	COG1234	tRNA 3'-trailer cleavage
JYG31_05585	COG0095	Lipoate-protein ligase
JYG31_05590	COG0702	epimerase
JYG31_05595	COG0318	PFAM AMP-dependent synthetase and ligase
JYG31_05605	COG0501	Belongs to the peptidase M48B family
JYG31_05610	COG1404	Belongs to the peptidase S8 family
JYG31_05615	COG0456	acetyltransferase
JYG31_05620	COG0604	alcohol dehydrogenase
JYG31_05625	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
JYG31_05630	COG0406	alpha-ribazole phosphatase activity
JYG31_05635	COG0183	Belongs to the thiolase family
JYG31_05640	COG0318	PFAM AMP-dependent synthetase and ligase
JYG31_05645	COG1268	BioY protein
JYG31_05650	COG0840	transmembrane signaling receptor activity
JYG31_05655	COG0723	plastoquinol--plastocyanin reductase activity
JYG31_05655	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JYG31_05660	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_05670	COG4903	ComK protein
JYG31_05680	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_05690	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JYG31_05705	COG0398	Pfam SNARE associated Golgi protein
JYG31_05710	COG0681	Belongs to the peptidase S26 family
JYG31_05715	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JYG31_05720	COG1846	Transcriptional regulator
JYG31_05730	COG0738	Major facilitator superfamily
JYG31_05735	COG0673	inositol 2-dehydrogenase activity
JYG31_05740	COG0561	phosphatase activity
JYG31_05745	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JYG31_05750	COG1609	Transcriptional regulator
JYG31_05755	COG3180	Ammonia monooxygenase
JYG31_05760	COG2814	Major facilitator Superfamily
JYG31_05760	COG0477	Major facilitator Superfamily
JYG31_05775	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
JYG31_05780	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
JYG31_05785	COG1074	ATP-dependent DNA helicase activity
JYG31_05790	COG0420	3'-5' exonuclease activity
JYG31_05795	COG0419	ATPase involved in DNA repair
JYG31_05800	COG1403	HNH endonuclease
JYG31_05840	COG5337	Spore coat protein CotH
JYG31_05845	COG0179	Fumarylacetoacetate (FAA) hydrolase
JYG31_05855	COG1404	Belongs to the peptidase S8 family
JYG31_05865	COG0367	asparagine synthase
JYG31_05870	COG2318	DinB family
JYG31_05875	COG1562	ergosterol biosynthetic process
JYG31_05880	COG0534	Mate efflux family protein
JYG31_05885	COG2207	Transcriptional regulator
JYG31_05885	COG1917	Cupin 2, conserved barrel domain protein
JYG31_05890	COG1609	Transcriptional regulator
JYG31_05895	COG0673	inositol 2-dehydrogenase activity
JYG31_05900	COG2318	DinB family
JYG31_05905	COG1279	arginine transmembrane transporter activity
JYG31_05910	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JYG31_05915	COG1357	PFAM Pentapeptide repeats (8 copies)
JYG31_05920	COG2267	carboxylic ester hydrolase activity
JYG31_05925	COG0529	Catalyzes the synthesis of activated sulfate
JYG31_05930	COG2046	Belongs to the sulfate adenylyltransferase family
JYG31_05935	COG0175	sulfate reduction
JYG31_05940	COG2045	Belongs to the ComB family
JYG31_05945	COG1809	phosphosulfolactate synthase activity
JYG31_05950	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JYG31_05955	COG4948	Mandelate Racemase Muconate Lactonizing
JYG31_05960	COG2814	Major facilitator Superfamily
JYG31_05965	COG0454	-acetyltransferase
JYG31_05970	COG2153	protein acetylation
JYG31_05975	COG0646	methionine synthase
JYG31_05975	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
JYG31_05980	COG1666	GTP binding
JYG31_05985	COG2996	Protein conserved in bacteria
JYG31_06005	COG1695	Transcriptional regulator
JYG31_06020	COG3227	Zinc metalloprotease (Elastase)
JYG31_06025	COG1307	EDD domain protein, DegV family
JYG31_06030	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JYG31_06050	COG0561	phosphatase activity
JYG31_06055	COG1073	alpha beta
JYG31_06060	COG2151	metal-sulfur cluster biosynthetic enzyme
JYG31_06070	COG0277	FAD linked oxidase domain protein
JYG31_06075	COG2271	Major facilitator Superfamily
JYG31_06080	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JYG31_06085	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
JYG31_06095	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JYG31_06100	COG0505	Belongs to the CarA family
JYG31_06105	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
JYG31_06110	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JYG31_06125	COG2267	carboxylic ester hydrolase activity
JYG31_06135	COG1744	ABC transporter substrate-binding protein PnrA-like
JYG31_06150	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JYG31_06155	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JYG31_06160	COG5504	Zn-dependent protease
JYG31_06165	COG0444	Belongs to the ABC transporter superfamily
JYG31_06170	COG4608	Belongs to the ABC transporter superfamily
JYG31_06180	COG0601	transmembrane transport
JYG31_06185	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JYG31_06195	COG0180	Tryptophanyl-tRNA synthetase
JYG31_06200	COG4166	transmembrane transport
JYG31_06205	COG0601	transmembrane transport
JYG31_06210	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JYG31_06215	COG0444	Belongs to the ABC transporter superfamily
JYG31_06220	COG4608	Belongs to the ABC transporter superfamily
JYG31_06225	COG2814	Major facilitator Superfamily
JYG31_06230	COG0456	acetyltransferase
JYG31_06235	COG1393	Belongs to the ArsC family
JYG31_06240	COG0861	Integral membrane protein TerC family
JYG31_06250	COG4862	establishment of competence for transformation
JYG31_06255	COG4469	Competence protein
JYG31_06260	COG1164	Oligoendopeptidase f
JYG31_06270	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
JYG31_06275	COG2346	COG2346, Truncated hemoglobins
JYG31_06280	COG0741	lytic transglycosylase activity
JYG31_06285	COG4116	CYTH
JYG31_06295	COG2357	RelA SpoT domain protein
JYG31_06300	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JYG31_06305	COG0564	pseudouridine synthase activity
JYG31_06310	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
JYG31_06315	COG0475	glutathione-regulated potassium exporter activity
JYG31_06315	COG0569	domain protein
JYG31_06320	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
JYG31_06325	COG0352	thiamine-phosphate diphosphorylase activity
JYG31_06330	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JYG31_06335	COG2104	thiamine diphosphate biosynthetic process
JYG31_06340	COG2022	thiamine diphosphate biosynthetic process
JYG31_06345	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JYG31_06350	COG0351	phosphomethylpyrimidine kinase
JYG31_06355	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JYG31_06410	COG0210	DNA helicase
JYG31_06420	COG2153	protein acetylation
JYG31_06425	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
JYG31_06430	COG2382	esterase
JYG31_06435	COG0626	cystathionine gamma-synthase activity
JYG31_06440	COG0626	cystathionine gamma-synthase activity
JYG31_06445	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JYG31_06450	COG5505	Protein of unknown function (DUF819)
JYG31_06470	COG5444	nuclease activity
JYG31_06520	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
JYG31_06550	COG3409	Peptidoglycan-binding domain 1 protein
JYG31_06570	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JYG31_06575	COG0583	DNA-binding transcription factor activity
JYG31_06580	COG0697	spore germination
JYG31_06590	COG0789	Transcriptional regulator
JYG31_06610	COG0109	protoheme IX farnesyltransferase activity
JYG31_06620	COG0726	polysaccharide deacetylase
JYG31_06635	COG5504	Zn-dependent protease
JYG31_06640	COG2205	protein histidine kinase activity
JYG31_06650	COG3383	formate dehydrogenase (NAD+) activity
JYG31_06655	COG2427	Protein of unknown function (DUF1641)
JYG31_06665	COG1051	belongs to the nudix hydrolase family
JYG31_06675	COG2124	cytochrome p450
JYG31_06680	COG1819	glycosyl
JYG31_06695	COG1587	Uroporphyrinogen-III synthase
JYG31_06700	COG0390	transport system, permease component
JYG31_06705	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JYG31_06710	COG0697	spore germination
JYG31_06715	COG4297	protein containing double-stranded beta helix domain
JYG31_06725	COG1252	NADH dehydrogenase
JYG31_06730	COG1904	glucuronate isomerase
JYG31_06735	COG2211	Major facilitator Superfamily
JYG31_06740	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
JYG31_06745	COG1063	alcohol dehydrogenase
JYG31_06750	COG1312	Catalyzes the dehydration of D-mannonate
JYG31_06755	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_06760	COG2271	Major facilitator Superfamily
JYG31_06765	COG1609	Transcriptional regulator
JYG31_06770	COG0246	Mannitol dehydrogenase
JYG31_06775	COG2721	sulfolactate sulfo-lyase activity
JYG31_06780	COG0730	response to heat
JYG31_06785	COG2318	DinB family
JYG31_06790	COG0457	Tetratricopeptide repeat
JYG31_06800	COG2350	Protein conserved in bacteria
JYG31_06805	COG3409	Peptidoglycan-binding domain 1 protein
JYG31_06805	COG5632	N-Acetylmuramoyl-L-alanine amidase
JYG31_06805	COG1388	LysM domain
JYG31_06815	COG4195	phage-related replication protein
JYG31_06820	COG3546	catalase activity
JYG31_06825	COG2856	Zn peptidase
JYG31_06830	COG1396	sequence-specific DNA binding
JYG31_06840	COG1522	sequence-specific DNA binding
JYG31_06845	COG1484	DNA-dependent DNA replication
JYG31_06865	COG1595	DNA-templated transcription, initiation
JYG31_06870	COG5484	DNA packaging
JYG31_06870	COG3728	DNA packaging
JYG31_06875	COG1783	phage Terminase large subunit
JYG31_06880	COG5518	Phage portal protein
JYG31_06885	COG0338	D12 class N6 adenine-specific DNA methyltransferase
JYG31_06890	COG4653	Phage capsid family
JYG31_06940	COG5412	phage tail tape measure protein
JYG31_06940	COG3953	SLT domain
JYG31_06945	COG1652	LysM domain
JYG31_06950	COG4193	domain, Protein
JYG31_06960	COG3628	GPW Gp25 family protein
JYG31_06965	COG3299	homolog of phage Mu protein gp47
JYG31_06970	COG3778	Protein conserved in bacteria
JYG31_07030	COG0306	phosphate transporter
JYG31_07035	COG1392	Phosphate transport regulator
JYG31_07040	COG0531	amino acid
JYG31_07045	COG0346	lactoylglutathione lyase activity
JYG31_07050	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
JYG31_07055	COG0463	Glycosyl transferase, family 2
JYG31_07065	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JYG31_07070	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JYG31_07075	COG2362	D-Aminopeptidase
JYG31_07080	COG0601	transmembrane transport
JYG31_07085	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JYG31_07090	COG0444	Belongs to the ABC transporter superfamily
JYG31_07095	COG4166	transmembrane transport
JYG31_07100	COG1619	proteins homologs of microcin C7 resistance protein MccF
JYG31_07105	COG4948	Mandelate Racemase Muconate Lactonizing
JYG31_07110	COG0791	NLP P60 protein
JYG31_07115	COG4608	Belongs to the ABC transporter superfamily
JYG31_07120	COG2706	6-phosphogluconolactonase activity
JYG31_07125	COG1834	amidinotransferase
JYG31_07130	COG1607	acyl-coa hydrolase
JYG31_07135	COG1017	nitric oxide dioxygenase activity
JYG31_07135	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JYG31_07145	COG2323	membrane
JYG31_07150	COG2318	DinB family
JYG31_07155	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JYG31_07160	COG2076	Multidrug Resistance protein
JYG31_07165	COG2076	Multidrug Resistance protein
JYG31_07170	COG0788	formyltetrahydrofolate deformylase activity
JYG31_07175	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JYG31_07180	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JYG31_07185	COG1764	response to oxidative stress
JYG31_07190	COG1846	Transcriptional regulator
JYG31_07195	COG1764	response to oxidative stress
JYG31_07200	COG0457	Tetratricopeptide repeat
JYG31_07200	COG0463	Glycosyl transferase, family 2
JYG31_07205	COG0590	tRNA wobble adenosine to inosine editing
JYG31_07210	COG0406	alpha-ribazole phosphatase activity
JYG31_07215	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JYG31_07220	COG1404	Belongs to the peptidase S8 family
JYG31_07225	COG1366	Belongs to the anti-sigma-factor antagonist family
JYG31_07230	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JYG31_07235	COG1122	ATPase activity
JYG31_07240	COG4721	ABC-type cobalt transport system, permease component
JYG31_07250	COG0745	RESPONSE REGULATOR receiver
JYG31_07255	COG3850	Histidine kinase
JYG31_07255	COG5002	protein histidine kinase activity
JYG31_07260	COG3212	peptidase
JYG31_07265	COG3212	peptidase
JYG31_07275	COG2239	Acts as a magnesium transporter
JYG31_07280	COG0789	Transcriptional regulator
JYG31_07295	COG1846	Transcriptional regulator
JYG31_07300	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JYG31_07305	COG0726	polysaccharide deacetylase
JYG31_07310	COG1408	metallophosphoesterase
JYG31_07320	COG0463	Glycosyl transferase, family 2
JYG31_07325	COG1793	dna ligase
JYG31_07325	COG3285	dna ligase
JYG31_07330	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
JYG31_07335	COG3300	MHYT domain
JYG31_07335	COG5001	Diguanylate cyclase
JYG31_07340	COG0586	Pfam SNARE associated Golgi protein
JYG31_07345	COG0861	Integral membrane protein TerC family
JYG31_07350	COG1191	sigma factor activity
JYG31_07370	COG0501	Belongs to the peptidase M48B family
JYG31_07375	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JYG31_07390	COG3594	Acyltransferase
JYG31_07395	COG5002	protein histidine kinase activity
JYG31_07400	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JYG31_07410	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
JYG31_07415	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
JYG31_07420	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JYG31_07425	COG0436	Aminotransferase
JYG31_07430	COG1850	ribulose-bisphosphate carboxylase activity
JYG31_07435	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
JYG31_07440	COG0235	Class ii aldolase
JYG31_07445	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
JYG31_07450	COG3339	Conserved Protein
JYG31_07465	COG3852	Histidine kinase
JYG31_07470	COG1846	Transcriptional regulator
JYG31_07475	COG1360	Flagellar Motor Protein
JYG31_07480	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JYG31_07485	COG0542	response to heat
JYG31_07490	COG3949	Membrane
JYG31_07495	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
JYG31_07500	COG0720	synthase
JYG31_07505	COG0602	queuosine metabolic process
JYG31_07510	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
JYG31_07515	COG1388	LysM domain
JYG31_07515	COG4641	Protein conserved in bacteria
JYG31_07520	COG1388	LysM domain
JYG31_07525	COG3858	chitin binding
JYG31_07535	COG4873	Protein conserved in bacteria
JYG31_07545	COG3773	Cell wall hydrolase
JYG31_07550	COG2244	polysaccharide biosynthetic process
JYG31_07555	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JYG31_07560	COG2217	Heavy metal translocating P-type atpase
JYG31_07570	COG0006	proline dipeptidase activity
JYG31_07575	COG1609	Transcriptional regulator
JYG31_07580	COG3711	transcriptional antiterminator
JYG31_07585	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JYG31_07585	COG1263	PTS System
JYG31_07585	COG2190	(PTS) system
JYG31_07590	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JYG31_07595	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JYG31_07605	COG1533	DNA photolyase activity
JYG31_07610	COG0456	acetyltransferase
JYG31_07615	COG0840	transmembrane signaling receptor activity
JYG31_07620	COG2084	Dehydrogenase
JYG31_07625	COG2340	Cysteine-rich secretory protein family
JYG31_07630	COG0768	penicillin binding
JYG31_07635	COG4191	Histidine kinase
JYG31_07640	COG0436	Aminotransferase
JYG31_07650	COG0784	Response regulator, receiver
JYG31_07650	COG0835	chemotaxis
JYG31_07660	COG2814	Major facilitator Superfamily
JYG31_07665	COG1376	ErfK ybiS ycfS ynhG family protein
JYG31_07670	COG1408	metallophosphoesterase
JYG31_07675	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_07680	COG3409	Peptidoglycan-binding domain 1 protein
JYG31_07690	COG2200	EAL domain
JYG31_07695	COG3546	catalase activity
JYG31_07700	COG4703	Protein of unknown function (DUF1797)
JYG31_07705	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
JYG31_07715	COG0517	IMP dehydrogenase activity
JYG31_07720	COG0583	DNA-binding transcription factor activity
JYG31_07725	COG0716	FMN binding
JYG31_07735	COG0716	FMN binding
JYG31_07740	COG2171	N-acyltransferase activity
JYG31_07745	COG1473	amidohydrolase
JYG31_07755	COG0668	transmembrane transport
JYG31_07760	COG0450	alkyl hydroperoxide reductase
JYG31_07765	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JYG31_07780	COG0746	molybdenum cofactor guanylyltransferase activity
JYG31_07785	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JYG31_07790	COG0303	'Molybdopterin
JYG31_07795	COG1763	Mo-molybdopterin cofactor biosynthetic process
JYG31_07800	COG0314	molybdopterin synthase activity
JYG31_07805	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
JYG31_07810	COG1132	(ABC) transporter
JYG31_07815	COG1132	(ABC) transporter
JYG31_07825	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JYG31_07830	COG1136	(ABC) transporter
JYG31_07835	COG0577	efflux transmembrane transporter activity
JYG31_07840	COG1349	DNA-binding transcription factor activity
JYG31_07845	COG1105	Belongs to the carbohydrate kinase PfkB family
JYG31_07850	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JYG31_07850	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JYG31_07850	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JYG31_07855	COG0681	Belongs to the peptidase S26 family
JYG31_07865	COG0488	(ABC) transporter
JYG31_07870	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JYG31_07875	COG2309	aminopeptidase activity
JYG31_07885	COG1077	Cell shape determining protein MreB Mrl
JYG31_07890	COG2002	toxin-antitoxin pair type II binding
JYG31_07895	COG3852	Histidine kinase
JYG31_07900	COG2105	PFAM AIG2 family protein
JYG31_07900	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
JYG31_07905	COG0569	domain protein
JYG31_07910	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
JYG31_07915	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JYG31_07920	COG5503	Protein of unknown function (DUF1447)
JYG31_07925	COG0561	phosphatase activity
JYG31_07930	COG0242	peptide deformylase activity
JYG31_07940	COG0497	DNA recombination
JYG31_07945	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JYG31_07950	COG0022	dehydrogenase e1 component
JYG31_07955	COG0508	dehydrogenase complex catalyzes the overall conversion of
JYG31_07960	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JYG31_07965	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JYG31_07975	COG1982	Orn Lys Arg decarboxylase major
JYG31_07980	COG4476	Belongs to the UPF0223 family
JYG31_07985	COG4493	Belongs to the UPF0637 family
JYG31_07995	COG0483	inositol monophosphate 1-phosphatase activity
JYG31_08005	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
JYG31_08045	COG1217	gtp-binding protein TYPA
JYG31_08055	COG4896	Protein conserved in bacteria
JYG31_08065	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
JYG31_08070	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JYG31_08075	COG2066	Belongs to the glutaminase family
JYG31_08080	COG4838	Belongs to the UPF0358 family
JYG31_08085	COG0772	Belongs to the SEDS family
JYG31_08090	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
JYG31_08095	COG1612	heme a metabolic process
JYG31_08100	COG0109	protoheme IX farnesyltransferase activity
JYG31_08105	COG2010	Cytochrome c
JYG31_08105	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JYG31_08110	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JYG31_08115	COG1845	cytochrome c oxidase, subunit III
JYG31_08120	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
JYG31_08125	COG3336	cytochrome c oxidase
JYG31_08135	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
JYG31_08140	COG2340	Cysteine-rich secretory protein family
JYG31_08155	COG3679	Belongs to the UPF0342 family
JYG31_08160	COG4471	UPF0298 protein
JYG31_08165	COG0742	ribosomal rna small subunit methyltransferase
JYG31_08170	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JYG31_08175	COG3314	Sporulation integral membrane protein YlbJ
JYG31_08180	COG1752	Esterase of the alpha-beta hydrolase superfamily
JYG31_08185	COG3480	Lon protease (S16) C-terminal proteolytic domain
JYG31_08190	COG1323	Belongs to the UPF0348 family
JYG31_08200	COG1399	metal-binding, possibly nucleic acid-binding protein
JYG31_08215	COG0454	-acetyltransferase
JYG31_08220	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JYG31_08225	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
JYG31_08230	COG2001	Belongs to the MraZ family
JYG31_08235	COG0275	rRNA processing
JYG31_08240	COG4839	cell division protein FtsL
JYG31_08245	COG0768	penicillin binding
JYG31_08250	COG0768	penicillin binding
JYG31_08255	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JYG31_08260	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JYG31_08265	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JYG31_08270	COG0772	Belongs to the SEDS family
JYG31_08275	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JYG31_08280	COG0812	UDP-N-acetylmuramate dehydrogenase activity
JYG31_08285	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
JYG31_08290	COG3879	Bacterial protein of unknown function (DUF881)
JYG31_08295	COG3879	Bacterial protein of unknown function (DUF881)
JYG31_08300	COG3856	small basic protein
JYG31_08305	COG0849	cell division
JYG31_08310	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JYG31_08315	COG1404	Belongs to the peptidase S8 family
JYG31_08315	COG4412	M6 family metalloprotease domain protein
JYG31_08325	COG1191	sigma factor activity
JYG31_08330	COG1191	sigma factor activity
JYG31_08335	COG1119	ATPase activity
JYG31_08340	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JYG31_08345	COG1873	PFAM PRC-barrel domain
JYG31_08350	COG1496	oxidoreductase activity
JYG31_08355	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JYG31_08360	COG1799	cell septum assembly
JYG31_08365	COG0762	integral membrane protein
JYG31_08370	COG2302	S4 RNA-binding domain
JYG31_08375	COG3599	regulation of cell shape
JYG31_08380	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JYG31_08385	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JYG31_08390	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JYG31_08395	COG0564	pseudouridine synthase activity
JYG31_08400	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
JYG31_08405	COG2233	PERMEase
JYG31_08410	COG0540	Belongs to the ATCase OTCase family
JYG31_08415	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JYG31_08420	COG0505	Belongs to the CarA family
JYG31_08425	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
JYG31_08430	COG0543	2 iron, 2 sulfur cluster binding
JYG31_08435	COG0167	dihydroorotate dehydrogenase activity
JYG31_08440	COG0284	orotidine-5'-phosphate decarboxylase activity
JYG31_08445	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JYG31_08450	COG0175	sulfate reduction
JYG31_08455	COG0306	phosphate transporter
JYG31_08460	COG2046	Belongs to the sulfate adenylyltransferase family
JYG31_08465	COG0529	Catalyzes the synthesis of activated sulfate
JYG31_08470	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JYG31_08475	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
JYG31_08480	COG1648	precorrin-2 dehydrogenase activity
JYG31_08485	COG1293	RNA-binding protein homologous to eukaryotic snRNP
JYG31_08490	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JYG31_08495	COG1561	YicC-like family, N-terminal region
JYG31_08505	COG0194	GDP metabolic process
JYG31_08510	COG1758	RNA polymerase activity
JYG31_08515	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JYG31_08520	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JYG31_08525	COG0242	peptide deformylase activity
JYG31_08530	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JYG31_08535	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JYG31_08535	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JYG31_08540	COG0820	rRNA (adenine-C2-)-methyltransferase activity
JYG31_08545	COG0631	protein serine/threonine phosphatase activity
JYG31_08550	COG0515	serine threonine protein kinase
JYG31_08550	COG2815	serine threonine protein kinase
JYG31_08555	COG1162	GTPase activity
JYG31_08560	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JYG31_08565	COG1564	THIamine pyrophosphokinase
JYG31_08575	COG0227	Belongs to the bacterial ribosomal protein bL28 family
JYG31_08580	COG1302	Protein conserved in bacteria
JYG31_08585	COG1461	Dihydroxyacetone kinase
JYG31_08590	COG1760	l-serine dehydratase
JYG31_08595	COG1760	l-serine dehydratase
JYG31_08600	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JYG31_08605	COG1349	DNA-binding transcription factor activity
JYG31_08605	COG2050	protein possibly involved in aromatic compounds catabolism
JYG31_08610	COG0416	fatty acid biosynthetic process
JYG31_08615	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JYG31_08620	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_08630	COG0571	ribonuclease III activity
JYG31_08635	COG1196	nuclear chromosome segregation
JYG31_08640	COG0552	protein localization to endoplasmic reticulum
JYG31_08650	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
JYG31_08655	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JYG31_08660	COG0228	four-way junction DNA binding
JYG31_08665	COG1837	Belongs to the UPF0109 family
JYG31_08675	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JYG31_08680	COG0336	Belongs to the RNA methyltransferase TrmD family
JYG31_08685	COG0335	large ribosomal subunit rRNA binding
JYG31_08690	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JYG31_08695	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JYG31_08705	COG2257	FlhB HrpN YscU SpaS Family
JYG31_08710	COG0045	succinate-CoA ligase (ADP-forming) activity
JYG31_08715	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JYG31_08720	COG0758	DNA mediated transformation
JYG31_08725	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JYG31_08730	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
JYG31_08735	COG4974	Belongs to the 'phage' integrase family
JYG31_08740	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
JYG31_08745	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
JYG31_08750	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
JYG31_08755	COG1815	bacterial-type flagellum-dependent cell motility
JYG31_08760	COG1558	bacterial-type flagellum-dependent cell motility
JYG31_08765	COG1677	Flagellar hook-basal body complex protein FliE
JYG31_08770	COG1766	The M ring may be actively involved in energy transduction
JYG31_08775	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JYG31_08780	COG1317	bacterial-type flagellum organization
JYG31_08785	COG1157	protein secretion by the type III secretion system
JYG31_08790	COG2882	bacterial-type flagellum organization
JYG31_08795	COG3334	PFAM MgtE intracellular
JYG31_08800	COG3144	bacterial-type flagellum assembly
JYG31_08805	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
JYG31_08810	COG4786	Flagellar basal body rod
JYG31_08815	COG1582	Flagellar protein (FlbD)
JYG31_08820	COG1580	Controls the rotational direction of flagella during chemotaxis
JYG31_08825	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JYG31_08830	COG1776	CheC inhibitor of MCP methylation
JYG31_08830	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JYG31_08835	COG2201	protein-glutamate methylesterase activity
JYG31_08840	COG3190	flagellar
JYG31_08845	COG1338	Plays a role in the flagellum-specific transport system
JYG31_08850	COG1987	bacterial-type flagellum assembly
JYG31_08855	COG1684	flagellar biosynthetic protein fliR
JYG31_08860	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JYG31_08865	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JYG31_08870	COG1419	protein localization to endoplasmic reticulum
JYG31_08875	COG0455	bacterial-type flagellum organization
JYG31_08880	COG2201	protein-glutamate methylesterase activity
JYG31_08885	COG0643	Histidine kinase
JYG31_08885	COG2198	Histidine kinase
JYG31_08890	COG0835	chemotaxis
JYG31_08895	COG1776	CheC inhibitor of MCP methylation
JYG31_08900	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
JYG31_08905	COG1191	sigma factor activity
JYG31_08915	COG0052	Belongs to the universal ribosomal protein uS2 family
JYG31_08920	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JYG31_08925	COG0528	UMP kinase activity
JYG31_08930	COG0233	cytoplasmic translational termination
JYG31_08935	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JYG31_08940	COG4589	Belongs to the CDS family
JYG31_08945	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
JYG31_08950	COG0750	zinc metalloprotease
JYG31_08955	COG0442	prolyl-tRNA aminoacylation
JYG31_08960	COG2176	DNA-directed DNA polymerase activity
JYG31_08965	COG0779	Required for maturation of 30S ribosomal subunits
JYG31_08970	COG0195	Participates in both transcription termination and antitermination
JYG31_08975	COG2740	Nucleic-acid-binding protein implicated in transcription termination
JYG31_08980	COG1358	cellular component organization or biogenesis
JYG31_08985	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JYG31_08990	COG1550	Protein conserved in bacteria
JYG31_08995	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JYG31_09000	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JYG31_09005	COG0196	riboflavin kinase activity
JYG31_09015	COG1185	polyribonucleotide nucleotidyltransferase activity
JYG31_09020	COG0726	polysaccharide deacetylase
JYG31_09025	COG0612	Peptidase, M16
JYG31_09030	COG1873	PFAM PRC-barrel domain
JYG31_09035	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JYG31_09040	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JYG31_09045	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JYG31_09050	COG0527	aspartate kinase activity
JYG31_09055	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JYG31_09060	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JYG31_09065	COG0740	serine-type endopeptidase activity
JYG31_09075	COG4980	gas vesicle protein
JYG31_09075	COG1674	ftsk spoiiie
JYG31_09080	COG2188	Transcriptional regulator
JYG31_09085	COG2814	Major facilitator Superfamily
JYG31_09090	COG0612	Peptidase, M16
JYG31_09095	COG0612	Peptidase, M16
JYG31_09100	COG0300	oxidoreductase activity
JYG31_09115	COG1426	Protein conserved in bacteria
JYG31_09120	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JYG31_09125	COG1058	Belongs to the CinA family
JYG31_09125	COG1546	Belongs to the CinA family
JYG31_09130	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JYG31_09135	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JYG31_09140	COG1418	mRNA catabolic process
JYG31_09145	COG1692	metallophosphoesterase
JYG31_09150	COG2359	stage V sporulation protein S
JYG31_09155	COG1063	alcohol dehydrogenase
JYG31_09160	COG0156	8-amino-7-oxononanoate synthase activity
JYG31_09165	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JYG31_09170	COG4550	Control of competence regulator ComK, YlbF/YmcA
JYG31_09180	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JYG31_09185	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JYG31_09215	COG0582	viral genome integration into host DNA
JYG31_09255	COG4824	toxin secretion phage lysis holin
JYG31_09265	COG5444	nuclease activity
JYG31_09285	COG3226	Transcriptional regulator
JYG31_09290	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JYG31_09295	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JYG31_09300	COG3321	synthase
JYG31_09305	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JYG31_09305	COG2070	2-Nitropropane dioxygenase
JYG31_09310	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JYG31_09315	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JYG31_09320	COG3425	synthase
JYG31_09325	COG1024	Enoyl-CoA hydratase
JYG31_09330	COG1024	Enoyl-CoA hydratase
JYG31_09335	COG0300	oxidoreductase activity
JYG31_09335	COG3321	synthase
JYG31_09335	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_09335	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JYG31_09335	COG0318	PFAM AMP-dependent synthetase and ligase
JYG31_09340	COG4221	oxidoreductase activity
JYG31_09340	COG0300	oxidoreductase activity
JYG31_09340	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JYG31_09340	COG3321	synthase
JYG31_09345	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JYG31_09345	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JYG31_09345	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JYG31_09345	COG3321	synthase
JYG31_09345	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_09350	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_09350	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JYG31_09350	COG3321	synthase
JYG31_09350	COG4221	oxidoreductase activity
JYG31_09355	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JYG31_09355	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
JYG31_09355	COG3321	synthase
JYG31_09355	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JYG31_09360	COG2124	cytochrome p450
JYG31_09370	COG1404	Belongs to the peptidase S8 family
JYG31_09380	COG4195	phage-related replication protein
JYG31_09385	COG1764	response to oxidative stress
JYG31_09410	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JYG31_09415	COG1923	regulation of RNA biosynthetic process
JYG31_09435	COG1780	Probably involved in ribonucleotide reductase function
JYG31_09440	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JYG31_09445	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JYG31_09450	COG4112	unkown
JYG31_09455	COG0860	N-Acetylmuramoyl-L-alanine amidase
JYG31_09460	COG1131	(ABC) transporter
JYG31_09465	COG0464	growth
JYG31_09470	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JYG31_09475	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
JYG31_09480	COG0789	Transcriptional regulator
JYG31_09485	COG0174	glutamine synthetase
JYG31_09505	COG1525	nuclease
JYG31_09515	COG4282	regulation of fungal-type cell wall biogenesis
JYG31_09530	COG5444	nuclease activity
JYG31_09570	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JYG31_09575	COG1388	LysM domain
JYG31_09580	COG0697	spore germination
JYG31_09585	COG0583	DNA-binding transcription factor activity
JYG31_09655	COG2273	Hydrolase Family 16
JYG31_09670	COG0457	Tetratricopeptide repeat
JYG31_09675	COG0726	polysaccharide deacetylase
JYG31_09700	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JYG31_09705	COG2720	vancomycin resistance protein
JYG31_09715	COG3655	Transcriptional regulator
JYG31_09725	COG2135	peptidase activity
JYG31_09730	COG5434	Belongs to the glycosyl hydrolase 28 family
JYG31_09750	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JYG31_09760	COG3832	glyoxalase III activity
JYG31_09790	COG4195	phage-related replication protein
JYG31_09820	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JYG31_09825	COG1388	LysM domain
JYG31_09830	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JYG31_09835	COG4224	UPF0291 protein
JYG31_09840	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JYG31_09850	COG3763	UPF0154 protein
JYG31_09860	COG0785	Cytochrome C biogenesis protein
JYG31_09865	COG2201	protein-glutamate methylesterase activity
JYG31_09870	COG4846	Membrane protein involved in cytochrome C biogenesis
JYG31_09880	COG0071	Belongs to the small heat shock protein (HSP20) family
JYG31_09895	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JYG31_09900	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JYG31_09920	COG0824	Thioesterase
JYG31_09930	COG4841	protein insertion into membrane
JYG31_09935	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
JYG31_09940	COG1832	CoA-binding protein
JYG31_09945	COG0187	DNA topoisomerase II activity
JYG31_09950	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JYG31_09960	COG1115	amino acid carrier protein
JYG31_09965	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
JYG31_09980	COG5520	Belongs to the glycosyl hydrolase 30 family
JYG31_09985	COG3507	Belongs to the glycosyl hydrolase 43 family
JYG31_09995	COG2246	polysaccharide biosynthetic process
JYG31_10000	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JYG31_10005	COG0586	Pfam SNARE associated Golgi protein
JYG31_10010	COG2404	hydrolase activity, acting on ester bonds
JYG31_10015	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JYG31_10020	COG1024	Enoyl-CoA hydratase
JYG31_10025	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JYG31_10030	COG0511	ligase activity, forming carbon-carbon bonds
JYG31_10035	COG0439	Biotin carboxylase
JYG31_10040	COG0318	PFAM AMP-dependent synthetase and ligase
JYG31_10045	COG1960	acyl-CoA dehydrogenase activity
JYG31_10060	COG1649	PFAM Uncharacterised BCR, COG1649
JYG31_10070	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JYG31_10070	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
JYG31_10075	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JYG31_10080	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JYG31_10085	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JYG31_10090	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JYG31_10095	COG2027	D-alanyl-D-alanine carboxypeptidase
JYG31_10100	COG2017	converts alpha-aldose to the beta-anomer
JYG31_10105	COG0534	Mate efflux family protein
JYG31_10120	COG0582	viral genome integration into host DNA
JYG31_10125	COG0166	Belongs to the GPI family
JYG31_10130	COG0405	Gamma-glutamyltransferase
JYG31_10135	COG0583	DNA-binding transcription factor activity
JYG31_10140	COG0604	alcohol dehydrogenase
JYG31_10145	COG0493	'glutamate synthase
JYG31_10150	COG0067	glutamate synthase
JYG31_10150	COG0069	glutamate synthase activity
JYG31_10150	COG0070	glutamate synthase
JYG31_10155	COG0583	DNA-binding transcription factor activity
JYG31_10160	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JYG31_10180	COG0300	oxidoreductase activity
JYG31_10185	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
JYG31_10195	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JYG31_10210	COG1131	(ABC) transporter
JYG31_10220	COG2814	Major facilitator Superfamily
JYG31_10225	COG1070	Carbohydrate kinase
JYG31_10230	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JYG31_10235	COG0243	molybdopterin cofactor binding
JYG31_10245	COG4305	rare lipoprotein A
JYG31_10250	COG3619	membrane
JYG31_10260	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_10295	COG2814	Major facilitator Superfamily
JYG31_10300	COG1525	nuclease
JYG31_10305	COG1231	oxidoreductase activity
JYG31_10315	COG1070	Carbohydrate kinase
JYG31_10330	COG3507	Belongs to the glycosyl hydrolase 43 family
JYG31_10335	COG2211	Major facilitator Superfamily
JYG31_10360	COG3397	chitin binding
JYG31_10365	COG2318	DinB family
JYG31_10370	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JYG31_10410	COG0457	Tetratricopeptide repeat
JYG31_10425	COG0574	Belongs to the PEP-utilizing enzyme family
JYG31_10425	COG3848	Pyruvate phosphate dikinase
JYG31_10445	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_10450	COG1733	regulation of RNA biosynthetic process
JYG31_10460	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JYG31_10465	COG2207	Transcriptional regulator
JYG31_10465	COG0662	Cupin 2, conserved barrel domain protein
JYG31_10470	COG0456	acetyltransferase
JYG31_10475	COG1309	transcriptional regulator
JYG31_10480	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JYG31_10485	COG3708	Transcriptional regulator
JYG31_10490	COG2378	regulation of single-species biofilm formation
JYG31_10500	COG0640	Transcriptional regulator
JYG31_10505	COG0741	lytic transglycosylase activity
JYG31_10510	COG2322	membrane
JYG31_10525	COG1619	proteins homologs of microcin C7 resistance protein MccF
JYG31_10530	COG3239	Fatty acid desaturase
JYG31_10535	COG4585	Histidine kinase
JYG31_10540	COG2197	response regulator
JYG31_10545	COG3584	3D domain protein
JYG31_10545	COG1388	LysM domain
JYG31_10550	COG0514	ATP-dependent DNA helicase (RecQ)
JYG31_10560	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
JYG31_10565	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JYG31_10580	COG1012	belongs to the aldehyde dehydrogenase family
JYG31_10585	COG1657	PFAM Prenyltransferase squalene oxidase
JYG31_10590	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JYG31_10595	COG0733	neurotransmitter:sodium symporter activity
JYG31_10600	COG0385	Bile acid
JYG31_10605	COG0508	dehydrogenase complex catalyzes the overall conversion of
JYG31_10610	COG0567	Dehydrogenase, E1 component
JYG31_10615	COG4548	von Willebrand factor, type A
JYG31_10620	COG0714	Associated with various cellular activities
JYG31_10625	COG2032	superoxide dismutase activity
JYG31_10630	COG0791	NLP P60 protein
JYG31_10630	COG1388	LysM domain
JYG31_10635	COG1819	glycosyl
JYG31_10640	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JYG31_10645	COG0534	Mate efflux family protein
JYG31_10650	COG1366	Belongs to the anti-sigma-factor antagonist family
JYG31_10655	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JYG31_10660	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JYG31_10670	COG2962	Rard protein
JYG31_10700	COG1733	regulation of RNA biosynthetic process
JYG31_10705	COG0778	Nitroreductase
JYG31_10710	COG0400	carboxylic ester hydrolase activity
JYG31_10715	COG0346	lactoylglutathione lyase activity
JYG31_10725	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JYG31_10730	COG0793	Belongs to the peptidase S41A family
JYG31_10730	COG3409	Peptidoglycan-binding domain 1 protein
JYG31_10735	COG2226	methyltransferase
JYG31_10745	COG1876	peptidase activity
JYG31_10750	COG0813	purine-nucleoside phosphorylase activity
JYG31_10765	COG0671	phosphoesterase, PA-phosphatase related
JYG31_10785	COG4479	Belongs to the UPF0346 family
JYG31_10795	COG1509	lysine 2,3-aminomutase activity
JYG31_10800	COG0456	acetyltransferase
JYG31_10805	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JYG31_10810	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JYG31_10815	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JYG31_10820	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JYG31_10830	COG0456	acetyltransferase
JYG31_10835	COG0463	Glycosyl transferase, family 2
JYG31_10850	COG4641	Protein conserved in bacteria
JYG31_10855	COG4247	3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
JYG31_10860	COG1086	Polysaccharide biosynthesis protein
JYG31_10870	COG3331	DNA recombination
JYG31_10915	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
JYG31_10935	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JYG31_10970	COG4112	unkown
JYG31_10980	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JYG31_10985	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JYG31_10995	COG1372	Participates in initiation and elongation during chromosome replication
JYG31_10995	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JYG31_11000	COG1780	Probably involved in ribonucleotide reductase function
JYG31_11105	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JYG31_11130	COG3584	3D domain protein
JYG31_11135	COG0587	DNA-directed DNA polymerase activity
JYG31_11140	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JYG31_11145	COG0358	DNA primase activity
JYG31_11150	COG0305	Participates in initiation and elongation during chromosome replication
JYG31_11160	COG2887	Belongs to the helicase family. UvrD subfamily
JYG31_11185	COG3420	alginic acid biosynthetic process
JYG31_11185	COG5434	Belongs to the glycosyl hydrolase 28 family
JYG31_11190	COG4195	phage-related replication protein
JYG31_11210	COG2135	peptidase activity
JYG31_11215	COG1793	dna ligase
JYG31_11305	COG3655	Transcriptional regulator
JYG31_11320	COG0582	viral genome integration into host DNA
JYG31_11400	COG3655	Transcriptional regulator
JYG31_11490	COG0776	regulation of translation
JYG31_11530	COG4373	Mu-like prophage FluMu protein gp28
JYG31_11620	COG0584	glycerophosphoryl diester phosphodiesterase
JYG31_11635	COG0582	viral genome integration into host DNA
JYG31_11660	COG0739	heme binding
JYG31_11660	COG1196	nuclear chromosome segregation
JYG31_11660	COG0741	lytic transglycosylase activity
JYG31_11670	COG2433	Pfam Transposase IS66
JYG31_11680	COG5434	Belongs to the glycosyl hydrolase 28 family
JYG31_11685	COG5632	N-Acetylmuramoyl-L-alanine amidase
JYG31_11700	COG0457	Tetratricopeptide repeat
JYG31_11705	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JYG31_11735	COG5444	nuclease activity
JYG31_11745	COG4282	regulation of fungal-type cell wall biogenesis
JYG31_11755	COG1525	nuclease
JYG31_11775	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JYG31_11780	COG1086	Polysaccharide biosynthesis protein
JYG31_11790	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JYG31_11795	COG1846	Transcriptional regulator
JYG31_11800	COG0534	Mate efflux family protein
JYG31_11810	COG4698	Protein conserved in bacteria
JYG31_11815	COG2755	lipolytic protein G-D-S-L family
JYG31_11820	COG1999	signal sequence binding
JYG31_11830	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JYG31_11835	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JYG31_11840	COG1272	protein, Hemolysin III
JYG31_11845	COG0204	Acyl-transferase
JYG31_11850	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JYG31_11860	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JYG31_11870	COG2136	Putative SAM-dependent methyltransferase
JYG31_11870	COG2521	methyltransferase
JYG31_11880	COG0129	dihydroxy-acid dehydratase activity
JYG31_11885	COG1413	lyase activity
JYG31_11890	COG1418	mRNA catabolic process
JYG31_11895	COG0386	Belongs to the glutathione peroxidase family
JYG31_11900	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
JYG31_11905	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JYG31_11910	COG1278	Cold shock
JYG31_11930	COG0328	RNA-DNA hybrid ribonuclease activity
JYG31_11935	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
JYG31_11940	COG0328	RNA-DNA hybrid ribonuclease activity
JYG31_11950	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JYG31_11965	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JYG31_11975	COG1755	Isoprenylcysteine carboxyl methyltransferase
JYG31_11980	COG3424	synthase
JYG31_11985	COG2233	PERMEase
JYG31_11990	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JYG31_11995	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
JYG31_12005	COG0800	Aldolase
JYG31_12010	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JYG31_12015	COG1609	Transcriptional regulator
JYG31_12020	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
JYG31_12025	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_12030	COG1199	ATP-dependent helicase activity
JYG31_12045	COG0116	Belongs to the methyltransferase superfamily
JYG31_12060	COG4474	Belongs to the UPF0398 family
JYG31_12075	COG3359	exonuclease
JYG31_12080	COG1111	helicase
JYG31_12080	COG1205	dead DEAH box helicase
JYG31_12085	COG2190	(PTS) system
JYG31_12090	COG0071	Belongs to the small heat shock protein (HSP20) family
JYG31_12125	COG3331	DNA recombination
JYG31_12130	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JYG31_12130	COG4499	WXG100 protein secretion system (Wss), protein YukC
JYG31_12140	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JYG31_12145	COG3935	DnaD domain protein
JYG31_12150	COG0017	Asparaginyl-tRNA synthetase
JYG31_12155	COG0436	Aminotransferase
JYG31_12160	COG5353	protein conserved in bacteria
JYG31_12170	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JYG31_12170	COG1199	ATP-dependent helicase activity
JYG31_12175	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
JYG31_12180	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
JYG31_12185	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
JYG31_12190	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
JYG31_12190	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
JYG31_12195	COG0617	tRNA 3'-terminal CCA addition
JYG31_12200	COG0438	transferase activity, transferring glycosyl groups
JYG31_12205	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JYG31_12210	COG1803	Methylglyoxal synthase
JYG31_12215	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
JYG31_12220	COG1694	Mazg nucleotide pyrophosphohydrolase
JYG31_12225	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JYG31_12235	COG4347	Protein of unknown function (DUF1405)
JYG31_12240	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
JYG31_12240	COG2010	Cytochrome c
JYG31_12245	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
JYG31_12250	COG0723	plastoquinol--plastocyanin reductase activity
JYG31_12260	COG5582	Belongs to the UPF0302 family
JYG31_12265	COG0457	Tetratricopeptide repeat
JYG31_12270	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
JYG31_12275	COG0287	Prephenate dehydrogenase
JYG31_12280	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JYG31_12285	COG0159	tryptophan synthase activity
JYG31_12290	COG0133	tryptophan synthase activity
JYG31_12295	COG0135	phosphoribosylanthranilate isomerase activity
JYG31_12305	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JYG31_12310	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JYG31_12315	COG4401	Chorismate mutase type I
JYG31_12320	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
JYG31_12325	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JYG31_12330	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
JYG31_12335	COG0105	UTP biosynthetic process
JYG31_12340	COG0142	geranyltranstransferase activity
JYG31_12345	COG2226	methyltransferase
JYG31_12350	COG0142	geranyltranstransferase activity
JYG31_12360	COG0302	gtp cyclohydrolase
JYG31_12365	COG0776	regulation of translation
JYG31_12370	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JYG31_12385	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
JYG31_12390	COG1160	GTP binding
JYG31_12415	COG1304	FMN binding
JYG31_12420	COG0539	negative regulation of cytoplasmic translation
JYG31_12425	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
JYG31_12435	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
JYG31_12440	COG2959	enzyme of heme biosynthesis
JYG31_12445	COG3409	Peptidoglycan-binding domain 1 protein
JYG31_12445	COG3773	Cell wall hydrolase
JYG31_12450	COG2339	peptidase activity
JYG31_12455	COG0492	ferredoxin-NADP+ reductase activity
JYG31_12460	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JYG31_12465	COG4862	establishment of competence for transformation
JYG31_12470	COG1408	metallophosphoesterase
JYG31_12480	COG1388	LysM domain
JYG31_12485	COG1266	CAAX protease self-immunity
JYG31_12490	COG0514	ATP-dependent DNA helicase (RecQ)
JYG31_12495	COG4955	Helix-turn-helix domain
JYG31_12500	COG1141	Ferredoxin
JYG31_12505	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JYG31_12510	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JYG31_12515	COG0710	3-dehydroquinate dehydratase activity
JYG31_12525	COG1595	DNA-templated transcription, initiation
JYG31_12530	COG5002	protein histidine kinase activity
JYG31_12535	COG0745	RESPONSE REGULATOR receiver
JYG31_12540	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JYG31_12545	COG1333	cytochrome c biogenesis protein
JYG31_12550	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JYG31_12555	COG1187	pseudouridine synthase activity
JYG31_12560	COG0700	Nucleoside recognition
JYG31_12565	COG2715	membrane protein required for spore maturation
JYG31_12570	COG1686	Belongs to the peptidase S11 family
JYG31_12580	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JYG31_12585	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JYG31_12595	COG1547	Domain of unknown function (DUF309)
JYG31_12600	COG0456	acetyltransferase
JYG31_12605	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
JYG31_12610	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JYG31_12610	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JYG31_12615	COG0307	riboflavin synthase, alpha
JYG31_12620	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JYG31_12620	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JYG31_12630	COG0681	Belongs to the peptidase S26 family
JYG31_12635	COG3478	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
JYG31_12640	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JYG31_12645	COG4086	secreted protein
JYG31_12650	COG0019	diaminopimelate decarboxylase activity
JYG31_12655	COG0697	spore germination
JYG31_12670	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JYG31_12690	COG1191	sigma factor activity
JYG31_12695	COG2172	sigma factor antagonist activity
JYG31_12700	COG1366	Belongs to the anti-sigma-factor antagonist family
JYG31_12705	COG1686	Belongs to the peptidase S11 family
JYG31_12710	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
JYG31_12715	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
JYG31_12720	COG4974	Belongs to the 'phage' integrase family
JYG31_12730	COG0735	belongs to the Fur family
JYG31_12735	COG1300	Membrane
JYG31_12745	COG0281	malic enzyme
JYG31_12750	COG1757	Na H antiporter
JYG31_12755	COG1027	Aspartate ammonia-lyase
JYG31_12760	COG0252	asparaginase activity
JYG31_12765	COG1396	sequence-specific DNA binding
JYG31_12770	COG1379	DNA repair
JYG31_12775	COG0494	nUDIX hydrolase
JYG31_12785	COG0667	Aldo Keto reductase
JYG31_12795	COG1073	alpha beta
JYG31_12805	COG4918	Iron-sulphur cluster biosynthesis
JYG31_12810	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JYG31_12810	COG0456	acetyltransferase
JYG31_12815	COG2329	Antibiotic biosynthesis monooxygenase
JYG31_12820	COG0456	acetyltransferase
JYG31_12830	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JYG31_12840	COG3547	Transposase (IS116 IS110 IS902 family)
JYG31_12845	COG2211	Major facilitator Superfamily
JYG31_12855	COG0346	lactoylglutathione lyase activity
JYG31_12860	COG1072	(Pantothenic acid kinase))
JYG31_12865	COG3048	D-serine ammonia-lyase activity
JYG31_12870	COG0300	oxidoreductase activity
JYG31_12875	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JYG31_12880	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JYG31_12885	COG4187	Peptidase family M20/M25/M40
JYG31_12890	COG1902	pentaerythritol trinitrate reductase activity
JYG31_12895	COG0596	Alpha beta hydrolase
JYG31_12905	COG1234	tRNA 3'-trailer cleavage
JYG31_12910	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JYG31_12920	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JYG31_12925	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JYG31_12935	COG0706	membrane insertase activity
JYG31_12940	COG3361	conserved protein (COG2071)
JYG31_12945	COG2195	Cleaves the N-terminal amino acid of tripeptides
JYG31_12950	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JYG31_12955	COG0346	lactoylglutathione lyase activity
JYG31_12965	COG1376	ErfK ybiS ycfS ynhG family protein
JYG31_12970	COG4129	membrane
JYG31_12975	COG1126	abc transporter atp-binding protein
JYG31_12980	COG0765	amino acid transport
JYG31_12985	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JYG31_12995	COG1597	lipid kinase activity
JYG31_13000	COG2814	Major facilitator Superfamily
JYG31_13005	COG0789	Transcriptional regulator
JYG31_13005	COG4978	Transcriptional regulator
JYG31_13010	COG0508	dehydrogenase complex catalyzes the overall conversion of
JYG31_13015	COG0022	dehydrogenase e1 component
JYG31_13020	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JYG31_13025	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JYG31_13030	COG3426	butyrate kinase activity
JYG31_13035	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JYG31_13040	COG0280	phosphate acetyltransferase
JYG31_13045	COG3829	transcription factor binding
JYG31_13045	COG3290	protein histidine kinase activity
JYG31_13055	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
JYG31_13060	COG2079	MmgE PrpD family protein
JYG31_13065	COG0372	Belongs to the citrate synthase family
JYG31_13070	COG1960	acyl-CoA dehydrogenase activity
JYG31_13075	COG1250	3-hydroxyacyl-CoA dehydrogenase
JYG31_13080	COG0183	Belongs to the thiolase family
JYG31_13085	COG0584	glycerophosphoryl diester phosphodiesterase
JYG31_13090	COG0860	N-Acetylmuramoyl-L-alanine amidase
JYG31_13105	COG1902	pentaerythritol trinitrate reductase activity
JYG31_13110	COG0745	RESPONSE REGULATOR receiver
JYG31_13115	COG0750	zinc metalloprotease
JYG31_13120	COG0497	DNA recombination
JYG31_13125	COG1438	arginine binding
JYG31_13130	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
JYG31_13135	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JYG31_13140	COG0142	geranyltranstransferase activity
JYG31_13145	COG1722	exodeoxyribonuclease VII activity
JYG31_13150	COG1570	exodeoxyribonuclease VII activity
JYG31_13155	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JYG31_13160	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JYG31_13165	COG1302	Protein conserved in bacteria
JYG31_13170	COG0439	Biotin carboxylase
JYG31_13175	COG0511	ligase activity, forming carbon-carbon bonds
JYG31_13215	COG3854	ATPases associated with a variety of cellular activities
JYG31_13225	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JYG31_13230	COG0006	proline dipeptidase activity
JYG31_13235	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
JYG31_13245	COG3872	metal-dependent enzyme
JYG31_13255	COG1752	Esterase of the alpha-beta hydrolase superfamily
JYG31_13260	COG1321	iron dependent repressor
JYG31_13265	COG0095	Lipoate-protein ligase
JYG31_13270	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JYG31_13275	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JYG31_13280	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JYG31_13285	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JYG31_13290	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JYG31_13305	COG1396	sequence-specific DNA binding
JYG31_13315	COG0681	Belongs to the peptidase S26 family
JYG31_13340	COG4940	Competence protein ComGF
JYG31_13350	COG4970	Tfp pilus assembly protein FimT
JYG31_13355	COG4537	Required for transformation and DNA binding
JYG31_13360	COG1459	type II secretion system
JYG31_13365	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JYG31_13370	COG0517	IMP dehydrogenase activity
JYG31_13375	COG0598	Magnesium transport protein CorA
JYG31_13380	COG1253	flavin adenine dinucleotide binding
JYG31_13385	COG1366	Belongs to the anti-sigma-factor antagonist family
JYG31_13395	COG1393	Belongs to the ArsC family
JYG31_13405	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JYG31_13415	COG0011	TIGRFAM Protein of
JYG31_13425	COG2866	Carboxypeptidase
JYG31_13430	COG1368	sulfuric ester hydrolase activity
JYG31_13435	COG1940	carbohydrate kinase activity
JYG31_13440	COG4483	Protein conserved in bacteria
JYG31_13445	COG0457	Tetratricopeptide repeat
JYG31_13445	COG0705	Rhomboid family
JYG31_13455	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JYG31_13465	COG0438	transferase activity, transferring glycosyl groups
JYG31_13480	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JYG31_13485	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JYG31_13490	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JYG31_13495	COG0581	inorganic phosphate transmembrane transporter activity
JYG31_13500	COG0573	inorganic phosphate transmembrane transporter activity
JYG31_13505	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JYG31_13510	COG0768	penicillin binding
JYG31_13515	COG0477	Major facilitator Superfamily
JYG31_13520	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JYG31_13525	COG2839	Protein conserved in bacteria
JYG31_13530	COG5521	maltodextrose utilization protein MalA
JYG31_13535	COG1388	LysM domain
JYG31_13540	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
JYG31_13545	COG4709	membrane
JYG31_13550	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
JYG31_13555	COG0735	belongs to the Fur family
JYG31_13560	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JYG31_13570	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
JYG31_13575	COG0513	Belongs to the DEAD box helicase family
JYG31_13585	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
JYG31_13590	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JYG31_13595	COG2384	SAM-dependent methyltransferase
JYG31_13600	COG2010	Cytochrome c
JYG31_13605	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JYG31_13610	COG0358	DNA primase activity
JYG31_13615	COG1671	Belongs to the UPF0178 family
JYG31_13620	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
JYG31_13625	COG0517	IMP dehydrogenase activity
JYG31_13630	COG0751	glycine-tRNA ligase activity
JYG31_13635	COG0752	glycyl-tRNA synthetase alpha subunit
JYG31_13640	COG1381	Involved in DNA repair and RecF pathway recombination
JYG31_13650	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JYG31_13655	COG0295	cytidine deaminase activity
JYG31_13660	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
JYG31_13665	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JYG31_13670	COG1480	7TM receptor with intracellular HD hydrolase
JYG31_13675	COG1702	phosphate starvation-inducible protein PhoH
JYG31_13680	COG0561	phosphatase activity
JYG31_13695	COG4864	UPF0365 protein
JYG31_13700	COG1030	water channel activity
JYG31_13705	COG1610	YqeY-like protein
JYG31_13715	COG1283	sodium-dependent phosphate transmembrane transporter activity
JYG31_13720	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JYG31_13725	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JYG31_13730	COG2264	protein methyltransferase activity
JYG31_13745	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JYG31_13750	COG1420	regulation of RNA biosynthetic process
JYG31_13755	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JYG31_13760	COG0481	GTPase activity
JYG31_13770	COG0860	N-Acetylmuramoyl-L-alanine amidase
JYG31_13775	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
JYG31_13785	COG1466	dna polymerase III delta subunit
JYG31_13800	COG2333	competence protein COMEC
JYG31_13800	COG0658	competence protein
JYG31_13805	COG2131	deaminase
JYG31_13810	COG1596	polysaccharide export
JYG31_13810	COG1555	photosystem II stabilization
JYG31_13815	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JYG31_13820	COG2226	methyltransferase
JYG31_13825	COG0799	negative regulation of ribosome biogenesis
JYG31_13830	COG1713	HD superfamily hydrolase involved in NAD metabolism
JYG31_13835	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JYG31_13840	COG1534	Rna-binding protein
JYG31_13845	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JYG31_13850	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JYG31_13855	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
JYG31_13865	COG2755	lipolytic protein G-D-S-L family
JYG31_13870	COG5632	N-Acetylmuramoyl-L-alanine amidase
JYG31_13870	COG3409	Peptidoglycan-binding domain 1 protein
JYG31_13875	COG0398	Pfam SNARE associated Golgi protein
JYG31_13880	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
JYG31_13890	COG3209	COG3209 Rhs family protein
JYG31_13900	COG0114	fumarate hydratase activity
JYG31_13905	COG0583	DNA-binding transcription factor activity
JYG31_13910	COG2070	2-Nitropropane dioxygenase
JYG31_13915	COG1846	Transcriptional regulator
JYG31_13940	COG1335	isochorismatase
JYG31_14015	COG0563	adenylate kinase activity
JYG31_14020	COG2856	Zn peptidase
JYG31_14035	COG2085	NADP oxidoreductase coenzyme F420-dependent
JYG31_14040	COG1733	regulation of RNA biosynthetic process
JYG31_14060	COG2124	cytochrome p450
JYG31_14070	COG1309	transcriptional regulator
JYG31_14075	COG2732	(Barnase) inhibitor
JYG31_14100	COG1725	Transcriptional regulator
JYG31_14130	COG0747	negative chemotaxis
JYG31_14135	COG0601	transmembrane transport
JYG31_14140	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JYG31_14145	COG0444	Belongs to the ABC transporter superfamily
JYG31_14150	COG4608	Belongs to the ABC transporter superfamily
JYG31_14155	COG3443	Belongs to the bacterial solute-binding protein 9 family
JYG31_14165	COG4991	sh3 domain protein
JYG31_14170	COG4991	sh3 domain protein
JYG31_14180	COG1794	racemase activity, acting on amino acids and derivatives
JYG31_14200	COG0789	Transcriptional regulator
JYG31_14210	COG1064	alcohol dehydrogenase
JYG31_14215	COG0693	protein deglycase activity
JYG31_14220	COG1621	beta-fructofuranosidase activity
JYG31_14225	COG3716	PTS system mannose fructose sorbose family IID component
JYG31_14230	COG3715	PTS system
JYG31_14235	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JYG31_14240	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
JYG31_14245	COG3933	PFAM sigma-54 factor interaction domain-containing protein
JYG31_14245	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JYG31_14250	COG1113	amino acid transport
JYG31_14255	COG1280	lysine exporter protein (LysE YggA)
JYG31_14260	COG1378	Sugar-specific transcriptional regulator TrmB
JYG31_14265	COG1595	DNA-templated transcription, initiation
JYG31_14275	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
JYG31_14275	COG2755	lipolytic protein G-D-S-L family
JYG31_14285	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JYG31_14285	COG2124	cytochrome p450
JYG31_14290	COG1309	transcriptional regulator
JYG31_14295	COG2226	methyltransferase
JYG31_14310	COG2116	formate transmembrane transporter activity
JYG31_14315	COG5609	conserved protein (DUF2294)
JYG31_14320	COG3383	formate dehydrogenase (NAD+) activity
JYG31_14325	COG2427	Protein of unknown function (DUF1641)
JYG31_14335	COG0626	cystathionine gamma-synthase activity
JYG31_14340	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JYG31_14345	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JYG31_14350	COG2226	methyltransferase
JYG31_14365	COG0768	penicillin binding
JYG31_14370	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JYG31_14375	COG0572	uridine kinase
JYG31_14380	COG0826	peptidase U32
JYG31_14385	COG0826	peptidase U32
JYG31_14390	COG4122	O-methyltransferase activity
JYG31_14395	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JYG31_14400	COG3906	Belongs to the UPF0473 family
JYG31_14405	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JYG31_14410	COG4472	Bacterial protein of unknown function (DUF965)
JYG31_14415	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JYG31_14420	COG0628	permease
JYG31_14425	COG1126	abc transporter atp-binding protein
JYG31_14430	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JYG31_14435	COG0765	amino acid transport
JYG31_14440	COG0765	amino acid transport
JYG31_14455	COG3881	PFAM PRC-barrel domain
JYG31_14460	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JYG31_14465	COG0457	Tetratricopeptide repeat
JYG31_14470	COG0482	sulfurtransferase activity
JYG31_14475	COG1104	cysteine desulfurase activity
JYG31_14480	COG1959	2 iron, 2 sulfur cluster binding
JYG31_14485	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JYG31_14490	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JYG31_14500	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
JYG31_14505	COG0124	histidyl-tRNA synthetase
JYG31_14515	COG0860	N-Acetylmuramoyl-L-alanine amidase
JYG31_14515	COG3103	Sh3 type 3 domain protein
JYG31_14515	COG4991	sh3 domain protein
JYG31_14520	COG1490	D-aminoacyl-tRNA deacylase activity
JYG31_14525	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JYG31_14530	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JYG31_14535	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
JYG31_14535	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JYG31_14540	COG5416	Lipopolysaccharide assembly protein A domain
JYG31_14545	COG0490	domain, Protein
JYG31_14550	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JYG31_14550	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JYG31_14560	COG2244	polysaccharide biosynthetic process
JYG31_14565	COG2323	membrane
JYG31_14575	COG1862	Preprotein translocase
JYG31_14580	COG0343	queuine tRNA-ribosyltransferase activity
JYG31_14585	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
JYG31_14595	COG2255	four-way junction helicase activity
JYG31_14600	COG0632	four-way junction helicase activity
JYG31_14610	COG2814	Major facilitator Superfamily
JYG31_14615	COG0673	inositol 2-dehydrogenase activity
JYG31_14620	COG2112	serine threonine protein kinase
JYG31_14635	COG1115	amino acid carrier protein
JYG31_14650	COG1388	LysM domain
JYG31_14655	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
JYG31_14660	COG0157	Belongs to the NadC ModD family
JYG31_14665	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
JYG31_14670	COG1104	cysteine desulfurase activity
JYG31_14675	COG1827	regulation of RNA biosynthetic process
JYG31_14680	COG0077	Prephenate dehydratase
JYG31_14685	COG4492	Belongs to the UPF0735 family
JYG31_14690	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JYG31_14695	COG3290	protein histidine kinase activity
JYG31_14705	COG0211	Belongs to the bacterial ribosomal protein bL27 family
JYG31_14710	COG2868	ribosomal protein
JYG31_14715	COG0261	This protein binds to 23S rRNA in the presence of protein L20
JYG31_14720	COG1994	Peptidase M50
JYG31_14725	COG0739	heme binding
JYG31_14730	COG2894	cell division
JYG31_14735	COG0850	regulation of cytokinetic process
JYG31_14740	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
JYG31_14750	COG1077	Cell shape determining protein MreB Mrl
JYG31_14755	COG2003	Belongs to the UPF0758 family
JYG31_14760	COG0424	maF-like protein
JYG31_14770	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
JYG31_14775	COG0285	dihydrofolate synthase activity
JYG31_14780	COG0525	valine-tRNA ligase activity
JYG31_14790	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JYG31_14795	COG1388	LysM domain
JYG31_14800	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
JYG31_14805	COG0113	porphobilinogen synthase activity
JYG31_14810	COG1587	Uroporphyrinogen-III synthase
JYG31_14815	COG0181	hydroxymethylbilane synthase activity
JYG31_14820	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JYG31_14825	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
JYG31_14835	COG0218	Necessary for normal cell division and for the maintenance of normal septation
JYG31_14840	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JYG31_14845	COG0470	DNA polymerase III
JYG31_14845	COG1067	ATP-dependent peptidase activity
JYG31_14850	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JYG31_14855	COG0544	peptidyl-prolyl cis-trans isomerase activity
JYG31_14860	COG1477	protein flavinylation
JYG31_14860	COG0457	Tetratricopeptide repeat
JYG31_14865	COG0066	3-isopropylmalate dehydratase activity
JYG31_14870	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JYG31_14875	COG0473	3-isopropylmalate dehydrogenase activity
JYG31_14880	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JYG31_14885	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
JYG31_14890	COG0440	acetolactate synthase activity
JYG31_14895	COG0028	Belongs to the TPP enzyme family
JYG31_14905	COG0454	-acetyltransferase
JYG31_14915	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
JYG31_14935	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
JYG31_14960	COG0622	Phosphoesterase
JYG31_14965	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JYG31_14970	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
JYG31_14975	COG5401	PFAM Sporulation and spore germination
JYG31_14980	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
JYG31_14985	COG1846	Transcriptional regulator
JYG31_14990	COG2197	response regulator
JYG31_14995	COG0824	Thioesterase
JYG31_15000	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JYG31_15005	COG1053	succinate dehydrogenase
JYG31_15010	COG2009	succinate dehydrogenase
JYG31_15015	COG1719	4-vinyl reductase, 4VR
JYG31_15020	COG0527	aspartate kinase activity
JYG31_15030	COG0322	excinuclease ABC activity
JYG31_15035	COG3118	belongs to the thioredoxin family
JYG31_15040	COG3534	alpha-L-arabinofuranosidase
JYG31_15045	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
JYG31_15050	COG2086	electron transfer activity
JYG31_15055	COG1024	Enoyl-CoA hydratase
JYG31_15060	COG1309	transcriptional regulator
JYG31_15065	COG0318	PFAM AMP-dependent synthetase and ligase
JYG31_15070	COG3766	membrane
JYG31_15075	COG1193	negative regulation of DNA recombination
JYG31_15080	COG1796	DNA polymerase
JYG31_15080	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JYG31_15085	COG1286	toxin biosynthetic process
JYG31_15090	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
JYG31_15095	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JYG31_15100	COG0072	phenylalanine-tRNA ligase activity
JYG31_15100	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JYG31_15105	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JYG31_15115	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JYG31_15125	COG3835	regulator
JYG31_15130	COG0277	FAD linked oxidase domain protein
JYG31_15135	COG0247	lactate metabolic process
JYG31_15140	COG0346	lactoylglutathione lyase activity
JYG31_15145	COG1966	Carbon starvation protein
JYG31_15160	COG1695	Transcriptional regulator
JYG31_15165	COG3534	alpha-L-arabinofuranosidase
JYG31_15170	COG0395	ABC-type sugar transport system, permease component
JYG31_15175	COG1175	transmembrane transport
JYG31_15180	COG1653	transport
JYG31_15185	COG0371	Dehydrogenase
JYG31_15190	COG0647	UMP catabolic process
JYG31_15195	COG0235	Class ii aldolase
JYG31_15200	COG1069	ribulokinase activity
JYG31_15205	COG2160	L-arabinose isomerase activity
JYG31_15210	COG3507	Belongs to the glycosyl hydrolase 43 family
JYG31_15215	COG1363	Peptidase, m42
JYG31_15225	COG3326	Membrane
JYG31_15230	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JYG31_15235	COG0291	Belongs to the bacterial ribosomal protein bL35 family
JYG31_15240	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JYG31_15250	COG1346	cytolysis
JYG31_15255	COG1380	Effector of murein hydrolase LrgA
JYG31_15260	COG3279	Response regulator of the LytR AlgR family
JYG31_15265	COG3275	phosphorelay sensor kinase activity
JYG31_15270	COG1011	Hydrolase
JYG31_15275	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JYG31_15285	COG0398	Pfam SNARE associated Golgi protein
JYG31_15290	COG1484	DNA-dependent DNA replication
JYG31_15295	COG3611	Membrane attachment protein
JYG31_15300	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JYG31_15305	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
JYG31_15310	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JYG31_15315	COG1733	regulation of RNA biosynthetic process
JYG31_15320	COG2814	Major facilitator Superfamily
JYG31_15325	COG0656	L-ascorbic acid biosynthetic process
JYG31_15330	COG0237	dephospho-CoA kinase activity
JYG31_15335	COG1971	Probably functions as a manganese efflux pump
JYG31_15340	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
JYG31_15345	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JYG31_15345	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JYG31_15350	COG5002	protein histidine kinase activity
JYG31_15355	COG0745	RESPONSE REGULATOR receiver
JYG31_15360	COG0039	L-malate dehydrogenase activity
JYG31_15365	COG0538	isocitrate dehydrogenase activity
JYG31_15370	COG0372	Belongs to the citrate synthase family
JYG31_15375	COG2707	UPF0756 membrane protein
JYG31_15380	COG0628	permease
JYG31_15385	COG3030	protein affecting phage T7 exclusion by the F plasmid
JYG31_15390	COG0469	pyruvate kinase activity
JYG31_15395	COG0205	6-phosphofructokinase activity
JYG31_15400	COG0825	malonyl-CoA metabolic process
JYG31_15405	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
JYG31_15410	COG0281	malic enzyme
JYG31_15415	COG0587	DNA-directed DNA polymerase activity
JYG31_15435	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
JYG31_15445	COG4109	DRTGG domain
JYG31_15450	COG0730	response to heat
JYG31_15455	COG1473	amidohydrolase
JYG31_15460	COG0196	riboflavin kinase activity
JYG31_15465	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JYG31_15470	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JYG31_15475	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JYG31_15480	COG1126	abc transporter atp-binding protein
JYG31_15485	COG0765	amino acid transport
JYG31_15490	COG0765	amino acid transport
JYG31_15495	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JYG31_15500	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JYG31_15505	COG0454	-acetyltransferase
JYG31_15510	COG0583	DNA-binding transcription factor activity
JYG31_15515	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JYG31_15520	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_15525	COG0165	Argininosuccinate lyase
JYG31_15530	COG0137	argininosuccinate synthase activity
JYG31_15535	COG0521	Mo-molybdopterin cofactor biosynthetic process
JYG31_15540	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JYG31_15545	COG0827	DNA restriction-modification system
JYG31_15550	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
JYG31_15555	COG3874	Sporulation protein YtfJ
JYG31_15565	COG1714	RDD family
JYG31_15570	COG0616	signal peptide processing
JYG31_15575	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JYG31_15580	COG1574	metal-dependent hydrolase with the TIM-barrel fold
JYG31_15585	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JYG31_15595	COG0301	tRNA thio-modification
JYG31_15600	COG1104	cysteine desulfurase activity
JYG31_15605	COG1114	Component of the transport system for branched-chain amino acids
JYG31_15610	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
JYG31_15615	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JYG31_15620	COG1309	transcriptional regulator
JYG31_15625	COG1956	GAF domain-containing protein
JYG31_15630	COG2203	Gaf domain
JYG31_15630	COG2199	diguanylate cyclase activity
JYG31_15640	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JYG31_15645	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JYG31_15650	COG0454	-acetyltransferase
JYG31_15655	COG0517	IMP dehydrogenase activity
JYG31_15660	COG0123	including yeast histone deacetylase and acetoin utilization protein
JYG31_15665	COG1360	Flagellar Motor Protein
JYG31_15670	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JYG31_15675	COG1609	Transcriptional regulator
JYG31_15680	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
JYG31_15680	COG1605	Chorismate mutase
JYG31_15685	COG3118	belongs to the thioredoxin family
JYG31_15690	COG4980	gas vesicle protein
JYG31_15695	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
JYG31_15700	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JYG31_15705	COG1674	ftsk spoiiie
JYG31_15710	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JYG31_15715	COG4848	Belongs to the UPF0354 family
JYG31_15720	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JYG31_15735	COG1363	Peptidase, m42
JYG31_15740	COG5584	Small secreted protein
JYG31_15745	COG0281	malic enzyme
JYG31_15750	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JYG31_15755	COG0220	tRNA (guanine-N7-)-methyltransferase activity
JYG31_15765	COG0510	thiamine kinase activity
JYG31_15770	COG1523	belongs to the glycosyl hydrolase 13 family
JYG31_15775	COG1597	lipid kinase activity
JYG31_15785	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
JYG31_15790	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JYG31_15795	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JYG31_15800	COG2252	PERMEase
JYG31_15805	COG4473	ABC transporter
JYG31_15810	COG1131	(ABC) transporter
JYG31_15815	COG1349	DNA-binding transcription factor activity
JYG31_15820	COG1187	pseudouridine synthase activity
JYG31_15825	COG2244	polysaccharide biosynthetic process
JYG31_15830	COG2081	HI0933 family
JYG31_15835	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JYG31_15845	COG5578	integral membrane protein
JYG31_15850	COG0673	inositol 2-dehydrogenase activity
JYG31_15855	COG1653	transport
JYG31_15860	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
JYG31_15865	COG4209	transmembrane transport
JYG31_15870	COG2207	Transcriptional regulator
JYG31_15875	COG1653	transport
JYG31_15880	COG0395	ABC-type sugar transport system, permease component
JYG31_15885	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JYG31_15890	COG2124	cytochrome p450
JYG31_15895	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
JYG31_15905	COG0156	8-amino-7-oxononanoate synthase activity
JYG31_15910	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JYG31_15915	COG1424	Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
JYG31_15920	COG1073	alpha beta
JYG31_15925	COG1609	Transcriptional regulator
JYG31_15930	COG1653	transport
JYG31_15935	COG1175	transmembrane transport
JYG31_15940	COG0395	ABC-type sugar transport system, permease component
JYG31_15945	COG1486	melibiose metabolic process
JYG31_15950	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JYG31_15955	COG0495	leucyl-tRNA aminoacylation
JYG31_15965	COG2202	Pas domain
JYG31_15965	COG1366	Belongs to the anti-sigma-factor antagonist family
JYG31_15970	COG2814	Major facilitator Superfamily
JYG31_15975	COG2433	Pfam Transposase IS66
JYG31_15980	COG0577	efflux transmembrane transporter activity
JYG31_15985	COG1136	(ABC) transporter
JYG31_15990	COG2205	protein histidine kinase activity
JYG31_15995	COG0745	RESPONSE REGULATOR receiver
JYG31_16000	COG0577	efflux transmembrane transporter activity
JYG31_16005	COG1136	(ABC) transporter
JYG31_16020	COG1131	(ABC) transporter
JYG31_16025	COG1725	Transcriptional regulator
JYG31_16040	COG1242	4 iron, 4 sulfur cluster binding
JYG31_16045	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
JYG31_16055	COG2267	carboxylic ester hydrolase activity
JYG31_16060	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JYG31_16065	COG1113	amino acid transport
JYG31_16070	COG0367	asparagine synthase
JYG31_16075	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JYG31_16080	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
JYG31_16090	COG1506	peptidase
JYG31_16095	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JYG31_16100	COG1116	anion transmembrane transporter activity
JYG31_16105	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JYG31_16110	COG0494	nUDIX hydrolase
JYG31_16115	COG4824	toxin secretion phage lysis holin
JYG31_16120	COG0783	Belongs to the Dps family
JYG31_16135	COG1854	S-ribosylhomocysteine lyase activity
JYG31_16140	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
JYG31_16145	COG0288	reversible hydration of carbon dioxide
JYG31_16150	COG0254	rRNA binding
JYG31_16155	COG1271	oxidase subunit
JYG31_16160	COG1294	oxidase, subunit
JYG31_16170	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JYG31_16175	COG1321	iron dependent repressor
JYG31_16175	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JYG31_16180	COG1121	(ABC) transporter
JYG31_16185	COG0803	Belongs to the bacterial solute-binding protein 9 family
JYG31_16190	COG4948	Mandelate Racemase Muconate Lactonizing
JYG31_16195	COG0318	PFAM AMP-dependent synthetase and ligase
JYG31_16200	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
JYG31_16205	COG0596	Alpha beta hydrolase
JYG31_16210	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
JYG31_16215	COG1169	isochorismate synthase
JYG31_16220	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JYG31_16225	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
JYG31_16230	COG0058	SHG alpha-glucan phosphorylase activity
JYG31_16235	COG0297	glycogen (starch) synthase activity
JYG31_16240	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JYG31_16245	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JYG31_16250	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
JYG31_16375	COG3859	Proton-coupled thiamine transporter YuaJ
JYG31_16380	COG1247	-acetyltransferase
JYG31_16385	COG2268	Band 7 protein
JYG31_16390	COG1585	Membrane protein implicated in regulation of membrane protease activity
JYG31_16395	COG2318	DinB family
JYG31_16405	COG1454	alcohol dehydrogenase
JYG31_16410	COG1012	belongs to the aldehyde dehydrogenase family
JYG31_16415	COG1510	regulation of RNA biosynthetic process
JYG31_16425	COG0569	domain protein
JYG31_16430	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JYG31_16435	COG4682	membrane
JYG31_16440	COG1705	Flagellar rod assembly protein muramidase FlgJ
JYG31_16445	COG0477	Major facilitator Superfamily
JYG31_16450	COG5553	Cysteine dioxygenase type I
JYG31_16460	COG1968	undecaprenyl-diphosphatase activity
JYG31_16465	COG0628	permease
JYG31_16470	COG0673	inositol 2-dehydrogenase activity
JYG31_16475	COG4806	L-rhamnose isomerase
JYG31_16480	COG3254	rhamnose metabolic process
JYG31_16485	COG1070	Carbohydrate kinase
JYG31_16490	COG1349	DNA-binding transcription factor activity
JYG31_16495	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_16495	COG3347	Dehydrogenase
JYG31_16500	COG0840	transmembrane signaling receptor activity
JYG31_16505	COG0840	transmembrane signaling receptor activity
JYG31_16510	COG0840	transmembrane signaling receptor activity
JYG31_16515	COG0840	transmembrane signaling receptor activity
JYG31_16530	COG2070	2-Nitropropane dioxygenase
JYG31_16535	COG0432	Pfam Uncharacterised protein family UPF0047
JYG31_16540	COG0366	Alpha amylase catalytic
JYG31_16545	COG1253	flavin adenine dinucleotide binding
JYG31_16550	COG2738	Putative neutral zinc metallopeptidase
JYG31_16565	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JYG31_16580	COG0166	Belongs to the GPI family
JYG31_16585	COG1979	alcohol dehydrogenase
JYG31_16590	COG1979	alcohol dehydrogenase
JYG31_16595	COG2155	Conserved Protein
JYG31_16600	COG1098	S1 RNA binding domain
JYG31_16605	COG0436	Aminotransferase
JYG31_16610	COG1522	sequence-specific DNA binding
JYG31_16615	COG2267	carboxylic ester hydrolase activity
JYG31_16625	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JYG31_16630	COG2205	protein histidine kinase activity
JYG31_16640	COG5018	Exonuclease
JYG31_16645	COG2814	Major facilitator Superfamily
JYG31_16650	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JYG31_16655	COG3011	Protein conserved in bacteria
JYG31_16665	COG3290	protein histidine kinase activity
JYG31_16670	COG4565	transcriptional regulatory protein
JYG31_16675	COG1744	ABC transporter substrate-binding protein PnrA-like
JYG31_16680	COG3845	ABC transporter
JYG31_16685	COG4603	Belongs to the binding-protein-dependent transport system permease family
JYG31_16690	COG1079	Belongs to the binding-protein-dependent transport system permease family
JYG31_16695	COG3493	citrate carrier protein
JYG31_16705	COG2111	Na H antiporter
JYG31_16705	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JYG31_16710	COG2111	Na H antiporter
JYG31_16715	COG1006	Multisubunit Na H antiporter MnhC subunit
JYG31_16720	COG0651	ATP synthesis coupled electron transport
JYG31_16725	COG1863	multisubunit Na H antiporter MnhE subunit
JYG31_16730	COG2212	antiporter activity
JYG31_16735	COG1320	monovalent cation:proton antiporter activity
JYG31_16740	COG2050	protein possibly involved in aromatic compounds catabolism
JYG31_16745	COG2197	response regulator
JYG31_16750	COG4585	Histidine kinase
JYG31_16760	COG0142	geranyltranstransferase activity
JYG31_16775	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
JYG31_16780	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JYG31_16785	COG1335	isochorismatase
JYG31_16790	COG5506	Protein of unknown function (DUF1694)
JYG31_16805	COG0628	permease
JYG31_16815	COG1418	mRNA catabolic process
JYG31_16820	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_16830	COG1511	domain protein
JYG31_16835	COG1674	ftsk spoiiie
JYG31_16835	COG0433	COG0433 Predicted ATPase
JYG31_16840	COG4499	WXG100 protein secretion system (Wss), protein YukC
JYG31_16845	COG5417	Belongs to the EsaB family
JYG31_16850	COG4842	Belongs to the WXG100 family
JYG31_16855	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
JYG31_16855	COG2508	Transcriptional regulator
JYG31_16860	COG0686	Belongs to the AlaDH PNT family
JYG31_16865	COG5634	Uncharacterized conserved protein (DUF2278)
JYG31_16870	COG3251	PFAM MbtH domain protein
JYG31_16875	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JYG31_16880	COG1535	isochorismatase
JYG31_16880	COG3433	isochorismatase activity
JYG31_16885	COG1021	2,3-dihydroxybenzoate-AMP ligase
JYG31_16890	COG1169	isochorismate synthase
JYG31_16895	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_16900	COG2819	hydrolase of the alpha beta superfamily
JYG31_16905	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JYG31_16910	COG1268	BioY protein
JYG31_16915	COG2056	Na+-H+ antiporter family
JYG31_16920	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JYG31_16925	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
JYG31_16930	COG3584	3D domain protein
JYG31_16945	COG1252	NADH dehydrogenase
JYG31_16950	COG0492	ferredoxin-NADP+ reductase activity
JYG31_16960	COG0516	GMP reductase activity
JYG31_16965	COG0316	Belongs to the HesB IscA family
JYG31_16970	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JYG31_16975	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JYG31_16980	COG4844	belongs to the
JYG31_16985	COG1252	NADH dehydrogenase
JYG31_16990	COG4837	Protein of unknown function (DUF1462)
JYG31_16995	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
JYG31_17000	COG0823	Involved in the tonB-independent uptake of proteins
JYG31_17000	COG1506	peptidase
JYG31_17000	COG4946	Tricorn protease homolog
JYG31_17005	COG0083	homoserine kinase activity
JYG31_17010	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
JYG31_17015	COG0460	homoserine dehydrogenase
JYG31_17020	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JYG31_17025	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JYG31_17030	COG0647	UMP catabolic process
JYG31_17035	COG2445	Protein of unknown function DUF86
JYG31_17040	COG4470	Protein conserved in bacteria
JYG31_17055	COG0739	heme binding
JYG31_17065	COG3377	Domain of unknown function (DUF1805)
JYG31_17070	COG0737	Belongs to the 5'-nucleotidase family
JYG31_17075	COG0730	response to heat
JYG31_17080	COG1801	Protein of unknown function DUF72
JYG31_17090	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JYG31_17095	COG2508	Transcriptional regulator
JYG31_17100	COG2233	PERMEase
JYG31_17105	COG2233	PERMEase
JYG31_17110	COG3648	Uricase
JYG31_17110	COG3195	allantoin biosynthetic process
JYG31_17115	COG2351	hydroxyisourate hydrolase activity
JYG31_17125	COG2080	2 iron, 2 sulfur cluster binding
JYG31_17130	COG1529	Aldehyde oxidase and xanthine dehydrogenase
JYG31_17135	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
JYG31_17140	COG2068	MobA-Related Protein
JYG31_17145	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
JYG31_17150	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JYG31_17155	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JYG31_17160	COG2356	endonuclease I
JYG31_17165	COG3842	ATPase activity
JYG31_17170	COG2188	Transcriptional regulator
JYG31_17175	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JYG31_17180	COG0395	ABC-type sugar transport system, permease component
JYG31_17185	COG1175	transmembrane transport
JYG31_17190	COG1653	transport
JYG31_17195	COG2222	sugar isomerase
JYG31_17200	COG0322	excinuclease ABC activity
JYG31_17205	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JYG31_17220	COG0719	Fe-S assembly protein
JYG31_17225	COG0822	iron-sulfur transferase activity
JYG31_17230	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JYG31_17235	COG0719	Fe-S assembly protein
JYG31_17240	COG0396	ATPase activity
JYG31_17250	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JYG31_17255	COG1464	Belongs to the NlpA lipoprotein family
JYG31_17260	COG2011	ABC-type metal ion transport system permease component
JYG31_17265	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JYG31_17275	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JYG31_17280	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JYG31_17290	COG0509	glycine decarboxylation via glycine cleavage system
JYG31_17295	COG1393	Belongs to the ArsC family
JYG31_17300	COG1960	acyl-CoA dehydrogenase activity
JYG31_17305	COG0183	Belongs to the thiolase family
JYG31_17310	COG1024	Enoyl-CoA hydratase
JYG31_17310	COG1250	3-hydroxyacyl-CoA dehydrogenase
JYG31_17320	COG0506	proline dehydrogenase activity
JYG31_17330	COG5577	PFAM Coat F domain
JYG31_17335	COG1846	Transcriptional regulator
JYG31_17340	COG0477	Major facilitator Superfamily
JYG31_17345	COG1942	4-Oxalocrotonate Tautomerase
JYG31_17350	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_17355	COG0583	DNA-binding transcription factor activity
JYG31_17365	COG1120	ATPase activity
JYG31_17380	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_17385	COG0783	Belongs to the Dps family
JYG31_17390	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JYG31_17395	COG0745	RESPONSE REGULATOR receiver
JYG31_17400	COG2205	protein histidine kinase activity
JYG31_17400	COG2770	Histidine kinase
JYG31_17410	COG1309	transcriptional regulator
JYG31_17415	COG0114	fumarate hydratase activity
JYG31_17425	COG0697	spore germination
JYG31_17430	COG0814	amino acid
JYG31_17440	COG2197	response regulator
JYG31_17445	COG4585	Histidine kinase
JYG31_17450	COG4758	membrane
JYG31_17455	COG3595	metallopeptidase activity
JYG31_17460	COG1842	Phage shock protein A
JYG31_17465	COG4758	membrane
JYG31_17470	COG2814	Major facilitator Superfamily
JYG31_17475	COG2096	Adenosyltransferase
JYG31_17480	COG1120	ATPase activity
JYG31_17485	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JYG31_17490	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JYG31_17495	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_17500	COG3386	PFAM SMP-30 Gluconolaconase
JYG31_17505	COG2205	protein histidine kinase activity
JYG31_17510	COG0745	RESPONSE REGULATOR receiver
JYG31_17520	COG1191	sigma factor activity
JYG31_17530	COG2140	Oxalate decarboxylase
JYG31_17540	COG0577	efflux transmembrane transporter activity
JYG31_17545	COG1136	(ABC) transporter
JYG31_17550	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JYG31_17555	COG1120	ATPase activity
JYG31_17560	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JYG31_17565	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JYG31_17570	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JYG31_17575	COG0531	amino acid
JYG31_17585	COG1988	membrane-bound metal-dependent
JYG31_17590	COG1368	sulfuric ester hydrolase activity
JYG31_17595	COG1910	domain protein
JYG31_17600	COG0725	ABC transporter, periplasmic molybdate-binding protein
JYG31_17605	COG4149	molybdate abc transporter
JYG31_17610	COG0656	L-ascorbic acid biosynthetic process
JYG31_17620	COG0025	NhaP-type Na H and K H
JYG31_17625	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JYG31_17630	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JYG31_17635	COG3973	AAA domain
JYG31_17645	COG2860	membrane
JYG31_17650	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
JYG31_17655	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JYG31_17660	COG2217	Heavy metal translocating P-type atpase
JYG31_17665	COG2217	Heavy metal translocating P-type atpase
JYG31_17670	COG2608	mercury ion transmembrane transporter activity
JYG31_17675	COG1937	Protein conserved in bacteria
JYG31_17680	COG0673	inositol 2-dehydrogenase activity
JYG31_17685	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
JYG31_17690	COG1289	transmembrane transporter activity
JYG31_17695	COG1802	Transcriptional regulator
JYG31_17700	COG0697	spore germination
JYG31_17710	COG2076	Multidrug Resistance protein
JYG31_17715	COG1309	transcriptional regulator
JYG31_17720	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_17730	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
JYG31_17735	COG0557	exoribonuclease II activity
JYG31_17740	COG1647	Serine aminopeptidase, S33
JYG31_17745	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JYG31_17750	COG0596	Alpha beta hydrolase
JYG31_17755	COG1476	TRANSCRIPTIONal
JYG31_17760	COG1396	sequence-specific DNA binding
JYG31_17765	COG1396	sequence-specific DNA binding
JYG31_17770	COG1733	regulation of RNA biosynthetic process
JYG31_17775	COG0840	transmembrane signaling receptor activity
JYG31_17780	COG1174	glycine betaine transport
JYG31_17785	COG1732	Glycine betaine
JYG31_17790	COG1174	glycine betaine transport
JYG31_17795	COG1125	glycine betaine transport
JYG31_17795	COG0517	IMP dehydrogenase activity
JYG31_17800	COG1510	regulation of RNA biosynthetic process
JYG31_17805	COG1174	glycine betaine transport
JYG31_17810	COG1732	Glycine betaine
JYG31_17815	COG1174	glycine betaine transport
JYG31_17820	COG1125	glycine betaine transport
JYG31_17820	COG0517	IMP dehydrogenase activity
JYG31_17825	COG1510	regulation of RNA biosynthetic process
JYG31_17835	COG3064	Membrane
JYG31_17840	COG4640	response to antibiotic
JYG31_17845	COG0456	acetyltransferase
JYG31_17860	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JYG31_17880	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JYG31_17885	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JYG31_17895	COG2234	aminopeptidase activity
JYG31_17905	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JYG31_17910	COG0149	triose-phosphate isomerase activity
JYG31_17915	COG0126	phosphoglycerate kinase activity
JYG31_17925	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JYG31_17930	COG2390	Transcriptional regulator
JYG31_17935	COG2814	Major facilitator Superfamily
JYG31_17940	COG1609	Transcriptional regulator
JYG31_17945	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JYG31_17950	COG0583	DNA-binding transcription factor activity
JYG31_17955	COG0697	spore germination
JYG31_17960	COG1113	amino acid transport
JYG31_17965	COG3858	chitin binding
JYG31_17970	COG1556	Lactate utilization protein
JYG31_17975	COG1139	Iron-sulfur cluster binding protein
JYG31_17980	COG0247	lactate metabolic process
JYG31_17985	COG2197	response regulator
JYG31_17990	COG4585	Histidine kinase
JYG31_17995	COG0842	Transport permease protein
JYG31_18000	COG1131	(ABC) transporter
JYG31_18005	COG0596	Alpha beta hydrolase
JYG31_18010	COG2208	phosphoserine phosphatase activity
JYG31_18015	COG3867	Arabinogalactan endo-beta-1,4-galactanase
JYG31_18020	COG1874	Beta-galactosidase
JYG31_18025	COG3833	ABC-type maltose transport systems, permease component
JYG31_18030	COG1175	transmembrane transport
JYG31_18035	COG2182	Extracellular solute-binding protein
JYG31_18040	COG1609	Transcriptional regulator
JYG31_18045	COG2186	Transcriptional regulator
JYG31_18050	COG1620	l-lactate permease
JYG31_18055	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
JYG31_18065	COG5039	Polysaccharide pyruvyl transferase
JYG31_18070	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JYG31_18075	COG0110	maltose O-acetyltransferase activity
JYG31_18080	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JYG31_18085	COG2244	polysaccharide biosynthetic process
JYG31_18090	COG1216	Glycosyl transferase, family 2
JYG31_18095	COG5039	Polysaccharide pyruvyl transferase
JYG31_18100	COG1216	Glycosyl transferase, family 2
JYG31_18110	COG0438	transferase activity, transferring glycosyl groups
JYG31_18115	COG1215	transferase activity, transferring glycosyl groups
JYG31_18120	COG0438	transferase activity, transferring glycosyl groups
JYG31_18125	COG1086	Polysaccharide biosynthesis protein
JYG31_18130	COG0489	protein tyrosine kinase activity
JYG31_18135	COG3944	biosynthesis protein
JYG31_18140	COG1396	sequence-specific DNA binding
JYG31_18145	COG2272	Belongs to the type-B carboxylesterase lipase family
JYG31_18155	COG3479	Phenolic acid decarboxylase
JYG31_18165	COG1794	racemase activity, acting on amino acids and derivatives
JYG31_18170	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JYG31_18180	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JYG31_18185	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JYG31_18190	COG0640	Transcriptional regulator
JYG31_18195	COG1621	beta-fructofuranosidase activity
JYG31_18200	COG1621	beta-fructofuranosidase activity
JYG31_18205	COG0531	amino acid
JYG31_18210	COG1309	transcriptional regulator
JYG31_18215	COG2076	Multidrug Resistance protein
JYG31_18220	COG2076	Multidrug Resistance protein
JYG31_18230	COG0277	FAD linked oxidase domain protein
JYG31_18245	COG1611	Belongs to the LOG family
JYG31_18250	COG1694	Mazg nucleotide pyrophosphohydrolase
JYG31_18255	COG0659	secondary active sulfate transmembrane transporter activity
JYG31_18260	COG0288	reversible hydration of carbon dioxide
JYG31_18265	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JYG31_18270	COG0577	efflux transmembrane transporter activity
JYG31_18275	COG1136	(ABC) transporter
JYG31_18280	COG5002	protein histidine kinase activity
JYG31_18285	COG0745	RESPONSE REGULATOR receiver
JYG31_18295	COG2162	N-hydroxyarylamine O-acetyltransferase activity
JYG31_18300	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JYG31_18305	COG1481	regulation of sporulation
JYG31_18310	COG0391	Required for morphogenesis under gluconeogenic growth conditions
JYG31_18315	COG1660	Displays ATPase and GTPase activities
JYG31_18320	COG1051	belongs to the nudix hydrolase family
JYG31_18325	COG0492	ferredoxin-NADP+ reductase activity
JYG31_18330	COG3883	PFAM NLP P60 protein
JYG31_18330	COG0791	NLP P60 protein
JYG31_18335	COG0457	Tetratricopeptide repeat
JYG31_18340	COG1132	(ABC) transporter
JYG31_18360	COG0140	phosphoribosyl-ATP diphosphatase activity
JYG31_18360	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JYG31_18365	COG0107	imidazoleglycerol-phosphate synthase activity
JYG31_18370	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
JYG31_18375	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JYG31_18380	COG0131	Imidazoleglycerol-phosphate dehydratase
JYG31_18385	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JYG31_18390	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
JYG31_18395	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
JYG31_18400	COG4990	cell redox homeostasis
JYG31_18405	COG5297	Belongs to the glycosyl hydrolase family 6
JYG31_18410	COG0110	maltose O-acetyltransferase activity
JYG31_18415	COG0546	phosphoglycolate phosphatase activity
JYG31_18420	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
JYG31_18425	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JYG31_18430	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
JYG31_18435	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JYG31_18440	COG0363	glucosamine-6-phosphate deaminase activity
JYG31_18445	COG2188	Transcriptional regulator
JYG31_18450	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
JYG31_18460	COG1846	Transcriptional regulator
JYG31_18465	COG2814	Major facilitator Superfamily
JYG31_18470	COG1950	PFAM Membrane protein of
JYG31_18475	COG1983	PspC domain protein
JYG31_18480	COG3595	metallopeptidase activity
JYG31_18495	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JYG31_18505	COG4897	Protein conserved in bacteria
JYG31_18510	COG0574	Belongs to the PEP-utilizing enzyme family
JYG31_18510	COG3848	Pyruvate phosphate dikinase
JYG31_18515	COG1309	transcriptional regulator
JYG31_18520	COG2814	Major facilitator Superfamily
JYG31_18525	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JYG31_18535	COG3409	Peptidoglycan-binding domain 1 protein
JYG31_18535	COG0793	Belongs to the peptidase S41A family
JYG31_18540	COG2177	Part of the ABC transporter FtsEX involved in
JYG31_18545	COG2884	Cell division ATP-binding protein ftsE
JYG31_18550	COG2010	Cytochrome c
JYG31_18555	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JYG31_18565	COG0653	protein targeting
JYG31_18570	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JYG31_18585	COG1516	flagellar protein fliS
JYG31_18590	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
JYG31_18595	COG1334	flagellar protein FlaG
JYG31_18600	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JYG31_18605	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
JYG31_18610	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
JYG31_18620	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JYG31_18625	COG1256	bacterial-type flagellum assembly
JYG31_18625	COG4786	Flagellar basal body rod
JYG31_18630	COG3418	PFAM FlgN family protein
JYG31_18635	COG2747	anti-sigma28 factor FlgM
JYG31_18645	COG1040	competence protein
JYG31_18655	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
JYG31_18660	COG1307	EDD domain protein, DegV family
JYG31_18665	COG2197	response regulator
JYG31_18670	COG4585	Histidine kinase
JYG31_18675	COG1739	Uncharacterized protein family UPF0029
JYG31_18680	COG1316	TRANSCRIPTIONal
JYG31_18705	COG1131	(ABC) transporter
JYG31_18715	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JYG31_18720	COG0438	transferase activity, transferring glycosyl groups
JYG31_18725	COG1215	transferase activity, transferring glycosyl groups
JYG31_18730	COG3206	protein involved in exopolysaccharide biosynthesis
JYG31_18735	COG3307	-O-antigen
JYG31_18740	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
JYG31_18745	COG0438	transferase activity, transferring glycosyl groups
JYG31_18745	COG0297	glycogen (starch) synthase activity
JYG31_18750	COG2244	polysaccharide biosynthetic process
JYG31_18760	COG2247	cell wall binding repeat
JYG31_18760	COG0860	N-Acetylmuramoyl-L-alanine amidase
JYG31_18765	COG2385	sporulation resulting in formation of a cellular spore
JYG31_18765	COG2247	cell wall binding repeat
JYG31_18775	COG1316	TRANSCRIPTIONal
JYG31_18780	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
JYG31_18785	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JYG31_18790	COG1134	teichoic acid transport
JYG31_18795	COG1682	transport, permease protein
JYG31_18800	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JYG31_18805	COG0438	transferase activity, transferring glycosyl groups
JYG31_18810	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
JYG31_18815	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
JYG31_18820	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JYG31_18830	COG4193	domain, Protein
JYG31_18835	COG1482	cell wall glycoprotein biosynthetic process
JYG31_18840	COG0697	spore germination
JYG31_18845	COG0814	amino acid
JYG31_18855	COG2814	Major facilitator Superfamily
JYG31_18860	COG1316	TRANSCRIPTIONal
JYG31_18865	COG0561	phosphatase activity
JYG31_18870	COG0791	NLP P60 protein
JYG31_18880	COG2843	Capsule synthesis protein
JYG31_18890	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JYG31_18895	COG1609	Transcriptional regulator
JYG31_18900	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JYG31_18905	COG1869	D-ribose catabolic process
JYG31_18910	COG1129	ABC transporter
JYG31_18915	COG1172	Belongs to the binding-protein-dependent transport system permease family
JYG31_18920	COG1879	ABC-type sugar transport system periplasmic component
JYG31_18925	COG3103	Sh3 type 3 domain protein
JYG31_18935	COG2249	NAD(P)H dehydrogenase (quinone) activity
JYG31_18940	COG3527	Alpha-acetolactate decarboxylase
JYG31_18945	COG0028	Belongs to the TPP enzyme family
JYG31_18950	COG0583	DNA-binding transcription factor activity
JYG31_18955	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JYG31_18970	COG5337	Spore coat protein CotH
JYG31_18980	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JYG31_18985	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JYG31_19000	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JYG31_19010	COG0405	Gamma-glutamyltransferase
JYG31_19015	COG1522	sequence-specific DNA binding
JYG31_19020	COG2059	Chromate
JYG31_19025	COG2059	Chromate
JYG31_19055	COG5444	nuclease activity
JYG31_19080	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
JYG31_19085	COG4464	protein tyrosine phosphatase activity
JYG31_19090	COG0489	protein tyrosine kinase activity
JYG31_19095	COG3944	biosynthesis protein
JYG31_19105	COG4715	Zinc finger, swim domain protein
JYG31_19110	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JYG31_19115	COG0561	phosphatase activity
JYG31_19120	COG1349	DNA-binding transcription factor activity
JYG31_19125	COG0629	single-stranded DNA binding
JYG31_19140	COG2602	Beta-lactamase
JYG31_19145	COG1970	mechanosensitive ion channel activity
JYG31_19150	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JYG31_19155	COG0457	Tetratricopeptide repeat
JYG31_19160	COG4786	Flagellar basal body rod
JYG31_19165	COG4786	Flagellar basal body rod
JYG31_19170	COG1077	Cell shape determining protein MreB Mrl
JYG31_19175	COG1609	Transcriptional regulator
JYG31_19185	COG1846	Transcriptional regulator
JYG31_19190	COG2814	Major facilitator Superfamily
JYG31_19195	COG3420	alginic acid biosynthetic process
JYG31_19200	COG1953	Uracil, thiamine, allantoin
JYG31_19205	COG0477	Major facilitator Superfamily
JYG31_19210	COG1335	isochorismatase
JYG31_19220	COG0004	ammonium transporteR
JYG31_19225	COG0347	Belongs to the P(II) protein family
JYG31_19230	COG0671	phosphoesterase, PA-phosphatase related
JYG31_19240	COG0739	heme binding
JYG31_19245	COG1247	-acetyltransferase
JYG31_19260	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JYG31_19275	COG2910	NAD(P)H-binding
JYG31_19280	COG1959	2 iron, 2 sulfur cluster binding
JYG31_19285	COG0804	urea catabolic process
JYG31_19290	COG0832	Belongs to the urease beta subunit family
JYG31_19295	COG0831	urea catabolic process
JYG31_19325	COG3237	CsbD-like
JYG31_19330	COG1994	Peptidase M50
JYG31_19335	COG0457	Tetratricopeptide repeat
JYG31_19340	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
JYG31_19345	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
JYG31_19355	COG2304	oxidoreductase activity
JYG31_19360	COG2304	oxidoreductase activity
JYG31_19365	COG2385	sporulation resulting in formation of a cellular spore
JYG31_19370	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JYG31_19380	COG4836	Membrane
JYG31_19390	COG0355	proton-transporting ATP synthase activity, rotational mechanism
JYG31_19395	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JYG31_19400	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JYG31_19410	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JYG31_19415	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JYG31_19425	COG0356	it plays a direct role in the translocation of protons across the membrane
JYG31_19435	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JYG31_19440	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JYG31_19445	COG4475	Protein of unknown function (DUF436)
JYG31_19450	COG0698	ribose 5-phosphate isomerase
JYG31_19455	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JYG31_19460	COG1971	Probably functions as a manganese efflux pump
JYG31_19465	COG0009	L-threonylcarbamoyladenylate synthase
JYG31_19470	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
JYG31_19490	COG2890	protein-(glutamine-N5) methyltransferase activity
JYG31_19495	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JYG31_19500	COG0346	lactoylglutathione lyase activity
JYG31_19505	COG0789	Transcriptional regulator
JYG31_19510	COG0679	Auxin Efflux Carrier
JYG31_19515	COG0281	malic enzyme
JYG31_19520	COG1435	thymidine kinase activity
JYG31_19530	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JYG31_19540	COG1494	fructose-1,6-bisphosphatase
JYG31_19545	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JYG31_19550	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JYG31_19555	COG0191	fructose-bisphosphate aldolase activity
JYG31_19560	COG2204	response regulator
JYG31_19565	COG4821	SIS domain
JYG31_19570	COG0504	CTP synthase activity
JYG31_19575	COG3343	RNA polymerase activity
JYG31_19580	COG1960	acyl-CoA dehydrogenase activity
JYG31_19585	COG2181	nitrate reductase activity
JYG31_19585	COG0247	lactate metabolic process
JYG31_19590	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JYG31_19595	COG4294	response to UV
JYG31_19605	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JYG31_19610	COG1132	(ABC) transporter
JYG31_19615	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JYG31_19625	COG2181	nitrate reductase activity
JYG31_19630	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JYG31_19635	COG1140	nitrate reductase beta subunit
JYG31_19640	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JYG31_19645	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JYG31_19655	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JYG31_19660	COG2223	nitrite transmembrane transporter activity
JYG31_19665	COG0018	arginyl-trna synthetase
JYG31_19670	COG4506	Protein conserved in bacteria
JYG31_19680	COG0535	radical SAM domain protein
JYG31_19690	COG1131	(ABC) transporter
JYG31_19700	COG0612	Peptidase, M16
JYG31_19720	COG3391	amine dehydrogenase activity
JYG31_19725	COG0457	Tetratricopeptide repeat
JYG31_19735	COG0010	Belongs to the arginase family
JYG31_19740	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
JYG31_19745	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JYG31_19760	COG1994	Peptidase M50
JYG31_19765	COG1942	4-Oxalocrotonate Tautomerase
JYG31_19770	COG1846	Transcriptional regulator
JYG31_19775	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JYG31_19780	COG0477	Major facilitator Superfamily
JYG31_19785	COG1959	2 iron, 2 sulfur cluster binding
JYG31_19790	COG3465	dGTPase activity
JYG31_19795	COG1078	dGTPase activity
JYG31_19800	COG4844	belongs to the
JYG31_19810	COG0697	spore germination
JYG31_19815	COG0095	Lipoate-protein ligase
JYG31_19820	COG0583	DNA-binding transcription factor activity
JYG31_19825	COG0280	phosphate acetyltransferase
JYG31_19830	COG3253	May function as heme-dependent peroxidase
JYG31_19835	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_19840	COG0436	Aminotransferase
JYG31_19845	COG2814	Major facilitator Superfamily
JYG31_19850	COG0151	Belongs to the GarS family
JYG31_19855	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_19860	COG1917	Cupin 2, conserved barrel domain protein
JYG31_19865	COG0077	Prephenate dehydratase
JYG31_19870	COG2814	Major facilitator Superfamily
JYG31_19880	COG0833	amino acid
JYG31_19885	COG4187	Peptidase family M20/M25/M40
JYG31_19890	COG1012	belongs to the aldehyde dehydrogenase family
JYG31_19895	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JYG31_19905	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
JYG31_19910	COG1091	dTDP-4-dehydrorhamnose reductase activity
JYG31_19915	COG1088	dTDP-glucose 4,6-dehydratase activity
JYG31_19920	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JYG31_19925	COG3980	spore coat polysaccharide biosynthesis protein
JYG31_19930	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
JYG31_19935	COG2089	acid synthase
JYG31_19940	COG0456	acetyltransferase
JYG31_19945	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JYG31_19950	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JYG31_19955	COG0463	Glycosyl transferase, family 2
JYG31_19965	COG2363	Small membrane protein
JYG31_19970	COG2233	PERMEase
JYG31_19980	COG1012	belongs to the aldehyde dehydrogenase family
JYG31_19985	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JYG31_19990	COG1216	Glycosyl transferase, family 2
JYG31_20005	COG1695	Transcriptional regulator
JYG31_20010	COG0351	phosphomethylpyrimidine kinase
JYG31_20020	COG1621	beta-fructofuranosidase activity
JYG31_20025	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JYG31_20025	COG1263	PTS System
JYG31_20030	COG2116	formate transmembrane transporter activity
JYG31_20035	COG3711	transcriptional antiterminator
JYG31_20045	COG1404	Belongs to the peptidase S8 family
JYG31_20050	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JYG31_20055	COG0778	Nitroreductase
JYG31_20060	COG0772	Belongs to the SEDS family
JYG31_20080	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JYG31_20085	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JYG31_20090	COG2261	transglycosylase associated protein
JYG31_20095	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
JYG31_20100	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JYG31_20105	COG2246	polysaccharide biosynthetic process
JYG31_20110	COG1309	transcriptional regulator
JYG31_20120	COG3162	membrane
JYG31_20125	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JYG31_20130	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
JYG31_20135	COG2837	iron assimilation
JYG31_20140	COG2822	iron ion transport
JYG31_20145	COG0672	)-iron permease
JYG31_20150	COG0352	thiamine-phosphate diphosphorylase activity
JYG31_20155	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
JYG31_20160	COG0583	DNA-binding transcription factor activity
JYG31_20165	COG1380	Effector of murein hydrolase LrgA
JYG31_20170	COG1346	cytolysis
JYG31_20175	COG2814	Major facilitator Superfamily
JYG31_20180	COG4895	conserved protein (DUF2196)
JYG31_20185	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JYG31_20190	COG0346	lactoylglutathione lyase activity
JYG31_20200	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JYG31_20205	COG1404	Belongs to the peptidase S8 family
JYG31_20210	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JYG31_20210	COG1263	PTS System
JYG31_20215	COG3711	transcriptional antiterminator
JYG31_20220	COG1442	glycosyl transferase family 8
JYG31_20225	COG5522	Integral membrane protein (intg_mem_TP0381)
JYG31_20230	COG1846	Transcriptional regulator
JYG31_20235	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JYG31_20240	COG2234	aminopeptidase activity
JYG31_20255	COG2814	Major facilitator Superfamily
JYG31_20260	COG2357	RelA SpoT domain protein
JYG31_20265	COG1575	Belongs to the MenA family. Type 1 subfamily
JYG31_20275	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JYG31_20280	COG1696	Membrane protein involved in D-alanine export
JYG31_20285	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JYG31_20290	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
JYG31_20295	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
JYG31_20300	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JYG31_20305	COG1486	melibiose metabolic process
JYG31_20310	COG1447	Phosphotransferase system cellobiose-specific component IIA
JYG31_20315	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JYG31_20320	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JYG31_20325	COG3711	transcriptional antiterminator
JYG31_20325	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JYG31_20335	COG2094	Belongs to the DNA glycosylase MPG family
JYG31_20340	COG0753	catalase activity
JYG31_20345	COG2814	Major facilitator Superfamily
JYG31_20350	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JYG31_20355	COG1131	(ABC) transporter
JYG31_20375	COG1595	DNA-templated transcription, initiation
JYG31_20380	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JYG31_20385	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
JYG31_20390	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
JYG31_20395	COG4988	ABC transporter
JYG31_20400	COG1294	oxidase, subunit
JYG31_20405	COG1271	oxidase subunit
JYG31_20410	COG3493	citrate carrier protein
JYG31_20415	COG0501	Belongs to the peptidase M48B family
JYG31_20425	COG0726	polysaccharide deacetylase
JYG31_20435	COG3842	ATPase activity
JYG31_20440	COG2508	Transcriptional regulator
JYG31_20445	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JYG31_20455	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JYG31_20465	COG2195	Cleaves the N-terminal amino acid of tripeptides
JYG31_20480	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JYG31_20485	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JYG31_20490	COG3829	transcription factor binding
JYG31_20490	COG3290	protein histidine kinase activity
JYG31_20495	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_20500	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JYG31_20505	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JYG31_20510	COG2610	gluconate transmembrane transporter activity
JYG31_20515	COG0500	methyltransferase
JYG31_20525	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JYG31_20540	COG0753	catalase activity
JYG31_20540	COG0693	protein deglycase activity
JYG31_20545	COG2851	Citrate transporter
JYG31_20555	COG2723	6-phospho-beta-galactosidase activity
JYG31_20560	COG1263	PTS System
JYG31_20560	COG2190	(PTS) system
JYG31_20560	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JYG31_20565	COG3711	transcriptional antiterminator
JYG31_20575	COG2270	Major facilitator Superfamily
JYG31_20580	COG0513	Belongs to the DEAD box helicase family
JYG31_20585	COG3401	FG-GAP repeat protein
JYG31_20585	COG2755	lipolytic protein G-D-S-L family
JYG31_20620	COG0318	PFAM AMP-dependent synthetase and ligase
JYG31_20630	COG0300	oxidoreductase activity
JYG31_20645	COG1959	2 iron, 2 sulfur cluster binding
JYG31_20650	COG0702	epimerase
JYG31_20660	COG0697	spore germination
JYG31_20665	COG0589	response to stress
JYG31_20670	COG2723	6-phospho-beta-galactosidase activity
JYG31_20675	COG1263	PTS System
JYG31_20675	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JYG31_20675	COG2190	(PTS) system
JYG31_20725	COG3507	Belongs to the glycosyl hydrolase 43 family
JYG31_20740	COG2986	histidine ammonia-lyase
JYG31_20745	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
JYG31_20750	COG1228	amidohydrolase
JYG31_20755	COG0010	Belongs to the arginase family
JYG31_20760	COG0833	amino acid
JYG31_20765	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
JYG31_20770	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JYG31_20775	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JYG31_20780	COG2390	Transcriptional regulator
JYG31_20790	COG3192	ethanolamine utilization protein
JYG31_20795	COG2079	MmgE PrpD family protein
JYG31_20800	COG1473	amidohydrolase
JYG31_20805	COG1126	abc transporter atp-binding protein
JYG31_20810	COG0765	amino acid transport
JYG31_20815	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JYG31_20820	COG0456	acetyltransferase
JYG31_20825	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JYG31_20835	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
JYG31_20840	COG0561	phosphatase activity
JYG31_20870	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JYG31_20875	COG5294	Protein conserved in bacteria
JYG31_20880	COG0577	efflux transmembrane transporter activity
JYG31_20885	COG1136	(ABC) transporter
JYG31_20890	COG2205	protein histidine kinase activity
JYG31_20895	COG0745	RESPONSE REGULATOR receiver
JYG31_20900	COG0191	fructose-bisphosphate aldolase activity
JYG31_20910	COG1082	Xylose isomerase domain protein TIM barrel
JYG31_20915	COG0673	inositol 2-dehydrogenase activity
JYG31_20920	COG2814	Major facilitator Superfamily
JYG31_20925	COG1082	Xylose isomerase domain protein TIM barrel
JYG31_20930	COG3962	Belongs to the TPP enzyme family
JYG31_20935	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JYG31_20945	COG1012	belongs to the aldehyde dehydrogenase family
JYG31_20950	COG1349	DNA-binding transcription factor activity
JYG31_20955	COG0667	Aldo Keto reductase
JYG31_20980	COG2814	Major facilitator Superfamily
JYG31_20985	COG0326	Molecular chaperone. Has ATPase activity
JYG31_20995	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_21030	COG1309	transcriptional regulator
JYG31_21035	COG1012	belongs to the aldehyde dehydrogenase family
JYG31_21045	COG0789	Transcriptional regulator
JYG31_21050	COG1714	RDD family
JYG31_21055	COG2311	Membrane
JYG31_21060	COG1917	Cupin 2, conserved barrel domain protein
JYG31_21065	COG1309	transcriptional regulator
JYG31_21070	COG1028	Short-chain dehydrogenase reductase Sdr
JYG31_21095	COG5039	Polysaccharide pyruvyl transferase
JYG31_21100	COG1929	Belongs to the glycerate kinase type-1 family
JYG31_21105	COG1802	Transcriptional regulator
JYG31_21110	COG1070	Carbohydrate kinase
JYG31_21115	COG2610	gluconate transmembrane transporter activity
JYG31_21120	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JYG31_21125	COG0450	alkyl hydroperoxide reductase
JYG31_21130	COG3634	alkyl hydroperoxide reductase activity
JYG31_21135	COG2723	6-phospho-beta-galactosidase activity
JYG31_21145	COG2188	Transcriptional regulator
JYG31_21150	COG1074	ATP-dependent DNA helicase activity
JYG31_21155	COG0501	Belongs to the peptidase M48B family
JYG31_21175	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
JYG31_21180	COG0270	DNA (cytosine-5-)-methyltransferase activity
JYG31_21205	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JYG31_21220	COG1063	alcohol dehydrogenase
JYG31_21240	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
JYG31_21245	COG0456	acetyltransferase
JYG31_21250	COG0457	Tetratricopeptide repeat
JYG31_21260	COG0010	Belongs to the arginase family
JYG31_21265	COG0833	amino acid
JYG31_21270	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JYG31_21290	COG5658	integral membrane protein
JYG31_21295	COG0640	Transcriptional regulator
JYG31_21300	COG3829	transcription factor binding
JYG31_21305	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JYG31_21310	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JYG31_21315	COG4853	Protein conserved in bacteria
JYG31_21320	COG4863	YycH protein
JYG31_21325	COG5002	protein histidine kinase activity
JYG31_21330	COG0745	RESPONSE REGULATOR receiver
JYG31_21360	COG0346	lactoylglutathione lyase activity
JYG31_21365	COG0305	Participates in initiation and elongation during chromosome replication
JYG31_21380	COG3093	addiction module antidote protein HigA
JYG31_21385	COG2807	transmembrane transport
JYG31_21390	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
JYG31_21395	COG0359	binds to the 23S rRNA
JYG31_21400	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
JYG31_21405	COG4241	membrane
JYG31_21415	COG5577	PFAM Coat F domain
JYG31_21420	COG1733	regulation of RNA biosynthetic process
JYG31_21425	COG1227	inorganic diphosphatase activity
JYG31_21435	COG2271	Major facilitator Superfamily
JYG31_21440	COG4978	Transcriptional regulator
JYG31_21440	COG0789	Transcriptional regulator
JYG31_21450	COG4319	ketosteroid isomerase
JYG31_21455	COG1357	PFAM Pentapeptide repeats (8 copies)
JYG31_21460	COG2814	Major facilitator Superfamily
JYG31_21465	COG0583	DNA-binding transcription factor activity
JYG31_21470	COG2153	protein acetylation
JYG31_21480	COG0583	DNA-binding transcription factor activity
JYG31_21495	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JYG31_21505	COG0640	Transcriptional regulator
JYG31_21510	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JYG31_21525	COG1309	transcriptional regulator
JYG31_21530	COG0789	Transcriptional regulator
JYG31_21530	COG4978	Transcriptional regulator
JYG31_21535	COG1811	Na channel or pump
JYG31_21540	COG2207	Transcriptional regulator
JYG31_21540	COG3708	Transcriptional regulator
JYG31_21560	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JYG31_21565	COG1331	Highly conserved protein containing a thioredoxin domain
JYG31_21570	COG1266	CAAX protease self-immunity
JYG31_21575	COG2814	Major facilitator Superfamily
JYG31_21575	COG0477	Major facilitator Superfamily
JYG31_21580	COG0110	maltose O-acetyltransferase activity
JYG31_21585	COG0346	lactoylglutathione lyase activity
JYG31_21590	COG1609	Transcriptional regulator
JYG31_21595	COG0708	Exodeoxyribonuclease III
JYG31_21605	COG0629	single-stranded DNA binding
JYG31_21610	COG0360	Binds together with S18 to 16S ribosomal RNA
JYG31_21615	COG0012	GTP binding
JYG31_21620	COG0243	molybdopterin cofactor binding
JYG31_21625	COG4481	Protein conserved in bacteria
JYG31_21630	COG3949	Membrane
JYG31_21640	COG1475	DNA binding
JYG31_21645	COG1192	Involved in chromosome partitioning
JYG31_21655	COG1475	DNA binding
JYG31_21660	COG0357	Ribosomal RNA small subunit methyltransferase G
JYG31_21665	COG0445	tRNA wobble uridine modification
JYG31_21670	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JYG31_21675	COG1847	R3H domain protein
JYG31_21680	COG0706	membrane insertase activity
JYG31_21685	COG0594	ribonuclease P activity