locus-tag class description NM058_00085 PF01207 Dihydrouridine synthase (Dus) NM058_00090 PF01381 Helix-turn-helix NM058_00095 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NM058_00100 PF02152 Dihydroneopterin aldolase NM058_00105 PF00809 Pterin binding enzyme NM058_00115 PF00117 Glutamine amidotransferase class-I NM058_00125 PF00291 Pyridoxal-phosphate dependent enzyme NM058_00130 PF13145 PPIC-type PPIASE domain NM058_00135 PF01430 Hsp33 protein NM058_00140 PF03309 Type III pantothenate kinase NM058_00150 PF00156 Phosphoribosyl transferase domain NM058_00155 PF11734 TilS substrate C-terminal domain NM058_00155 PF09179 TilS substrate binding domain NM058_00155 PF01171 PP-loop family NM058_00165 PF00092 von Willebrand factor type A domain NM058_00170 PF07228 Stage II sporulation protein E (SpoIIE) NM058_00185 PF00575 S1 RNA binding domain NM058_00190 PF04977 Septum formation initiator NM058_00195 PF09578 Spore cortex protein YabQ (Spore_YabQ) NM058_00200 PF07873 YabP family NM058_00205 PF01479 S4 domain NM058_00215 PF01943 Polysaccharide biosynthesis protein NM058_00215 PF14667 Polysaccharide biosynthesis C-terminal domain NM058_00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NM058_00220 PF15714 Stage V sporulation protein T C-terminal, transcription factor NM058_00230 PF10955 Protein of unknown function (DUF2757) NM058_00240 PF14693 Ribosomal protein TL5, C-terminal domain NM058_00240 PF01386 Ribosomal L25p family NM058_00245 PF14572 Phosphoribosyl synthetase-associated domain NM058_00245 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NM058_00255 PF04026 SpoVG NM058_00260 PF01042 Endoribonuclease L-PSP NM058_00265 PF00156 Phosphoribosyl transferase domain NM058_00265 PF09182 Bacterial purine repressor, N-terminal NM058_00270 PF08544 GHMP kinases C terminal NM058_00270 PF00288 GHMP kinases N terminal domain NM058_00275 PF00269 Small, acid-soluble spore proteins, alpha/beta type NM058_00280 PF06257 Biofilm formation stimulator VEG NM058_00285 PF05582 YabG peptidase U57 NM058_00290 PF00398 Ribosomal RNA adenine dimethylase NM058_00295 PF13662 Toprim domain NM058_00295 PF13331 Domain of unknown function (DUF4093) NM058_00300 PF06725 3D domain NM058_00300 PF03990 G5-linked-Ubiquitin-like domain NM058_00300 PF07501 G5 domain NM058_00305 PF01026 TatD related DNase NM058_00310 PF08264 Anticodon-binding domain of tRNA NM058_00310 PF09334 tRNA synthetases class I (M) NM058_00310 PF01588 Putative tRNA binding domain NM058_00315 PF18277 AbrB C-terminal domain NM058_00315 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NM058_00325 PF01541 GIY-YIG catalytic domain NM058_00340 PF04468 PSP1 C-terminal conserved region NM058_00345 PF09115 DNA polymerase III, delta subunit, C terminal NM058_00350 PF03885 Protein of unknown function (DUF327) NM058_00355 PF06153 Cyclic-di-AMP receptor NM058_00360 PF02223 Thymidylate kinase NM058_00365 PF01276 Orn/Lys/Arg decarboxylase, major domain NM058_00365 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NM058_00370 PF05816 Toxic anion resistance protein (TelA) NM058_00375 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein NM058_00380 PF10764 Inhibitor of sigma-G Gin NM058_00410 PF07441 SigmaK-factor processing regulatory protein BofA NM058_00415 PF10704 Protein of unknown function (DUF2508) NM058_00420 PF02132 RecR protein NM058_00420 PF13662 Toprim domain NM058_00425 PF02575 YbaB/EbfC DNA-binding family NM058_00430 PF12169 DNA polymerase III subunits gamma and tau domain III NM058_00440 PF14437 MafB19-like deaminase NM058_00445 PF00857 Isochorismatase family NM058_00450 PF00704 Glycosyl hydrolases family 18 NM058_00450 PF01476 LysM domain NM058_00455 PF01712 Deoxynucleoside kinase NM058_00460 PF01712 Deoxynucleoside kinase NM058_00470 PF02403 Seryl-tRNA synthetase N-terminal domain NM058_00470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NM058_00475 PF01174 SNO glutamine amidotransferase family NM058_00480 PF01680 SOR/SNZ family NM058_00485 PF07943 Penicillin-binding protein 5, C-terminal domain NM058_00485 PF00768 D-alanyl-D-alanine carboxypeptidase NM058_00490 PF00571 CBS domain NM058_00490 PF00478 IMP dehydrogenase / GMP reductase domain NM058_00495 PF14175 YaaC-like Protein NM058_00535 PF04025 Domain of unknown function (DUF370) NM058_00540 PF02463 RecF/RecN/SMC N terminal domain NM058_00550 PF00712 DNA polymerase III beta subunit, N-terminal domain NM058_00550 PF02767 DNA polymerase III beta subunit, central domain NM058_00550 PF02768 DNA polymerase III beta subunit, C-terminal domain NM058_00555 PF00308 Bacterial dnaA protein NM058_00555 PF08299 Bacterial dnaA protein helix-turn-helix NM058_00555 PF11638 DnaA N-terminal domain NM058_00560 PF00468 Ribosomal protein L34 NM058_00565 PF00825 Ribonuclease P NM058_00570 PF02096 60Kd inner membrane protein NM058_00575 PF14804 Jag N-terminus NM058_00575 PF01424 R3H domain NM058_00580 PF10396 GTP-binding protein TrmE N-terminus NM058_00580 PF12631 MnmE helical domain NM058_00580 PF01926 50S ribosome-binding GTPase NM058_00585 PF01134 Glucose inhibited division protein A NM058_00585 PF13932 GidA associated domain NM058_00590 PF02527 rRNA small subunit methyltransferase G NM058_00595 PF17762 HTH domain found in ParB protein NM058_00595 PF02195 ParB-like nuclease domain NM058_00600 PF06713 Bacterial PH domain NM058_00605 PF13614 AAA domain NM058_00610 PF17762 HTH domain found in ParB protein NM058_00610 PF02195 ParB-like nuclease domain NM058_00615 PF06866 Protein of unknown function (DUF1256) NM058_00625 PF06107 Bacterial protein of unknown function (DUF951) NM058_00630 PF01568 Molydopterin dinucleotide binding domain NM058_00630 PF00384 Molybdopterin oxidoreductase NM058_00630 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NM058_00635 PF01926 50S ribosome-binding GTPase NM058_00635 PF06071 Protein of unknown function (DUF933) NM058_00640 PF01250 Ribosomal protein S6 NM058_00650 PF01084 Ribosomal protein S18 NM058_00655 PF03372 Endonuclease/Exonuclease/phosphatase family NM058_00665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NM058_00670 PF00083 Sugar (and other) transporter NM058_00680 PF03190 Protein of unknown function, DUF255 NM058_00690 PF06114 IrrE N-terminal-like domain NM058_00720 PF13411 MerR HTH family regulatory protein NM058_00730 PF04237 YjbR NM058_00750 PF13673 Acetyltransferase (GNAT) domain NM058_00755 PF01047 MarR family NM058_00765 PF00753 Metallo-beta-lactamase superfamily NM058_00770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NM058_00785 PF01810 LysE type translocator NM058_00800 PF13673 Acetyltransferase (GNAT) domain NM058_00805 PF03466 LysR substrate binding domain NM058_00805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NM058_00810 PF07690 Major Facilitator Superfamily NM058_00815 PF00805 Pentapeptide repeats (8 copies) NM058_00820 PF13474 SnoaL-like domain NM058_00830 PF07690 Major Facilitator Superfamily NM058_00840 PF01368 DHH family NM058_00840 PF02833 DHHA2 domain NM058_00845 PF01638 HxlR-like helix-turn-helix NM058_00850 PF07875 Coat F domain NM058_00875 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase NM058_00885 PF14174 YycC-like protein NM058_00895 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) NM058_00900 PF00772 DnaB-like helicase N terminal domain NM058_00900 PF03796 DnaB-like helicase C terminal domain NM058_00905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NM058_00910 PF00709 Adenylosuccinate synthetase NM058_00935 PF00486 Transcriptional regulatory protein, C terminal NM058_00935 PF00072 Response regulator receiver domain NM058_00945 PF07435 YycH protein NM058_00950 PF09648 YycH protein NM058_00955 PF00753 Metallo-beta-lactamase superfamily NM058_00960 PF13180 PDZ domain NM058_00990 PF02954 Bacterial regulatory protein, Fis family NM058_00990 PF13426 PAS domain NM058_00990 PF00158 Sigma-54 interaction domain NM058_00995 PF00202 Aminotransferase class-III NM058_01000 PF00324 Amino acid permease NM058_01005 PF00491 Arginase family NM058_01015 PF18801 response regulator aspartate phosphatase H, N terminal NM058_01020 PF00583 Acetyltransferase (GNAT) family NM058_01035 PF10852 Protein of unknown function (DUF2651) NM058_01055 PF14116 YyzF-like protein NM058_01060 PF02590 Predicted SPOUT methyltransferase NM058_01080 PF07702 UTRA domain NM058_01080 PF00392 Bacterial regulatory proteins, gntR family NM058_01085 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NM058_01085 PF00367 phosphotransferase system, EIIB NM058_01085 PF02378 Phosphotransferase system, EIIC NM058_01090 PF00232 Glycosyl hydrolase family 1 NM058_01100 PF07992 Pyridine nucleotide-disulphide oxidoreductase NM058_01100 PF13192 Thioredoxin domain NM058_01105 PF00578 AhpC/TSA family NM058_01110 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NM058_01110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NM058_01120 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NM058_01120 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NM058_01125 PF07729 FCD domain NM058_01125 PF00392 Bacterial regulatory proteins, gntR family NM058_01130 PF02595 Glycerate kinase family NM058_01135 PF04230 Polysaccharide pyruvyl transferase NM058_01155 PF04172 LrgB-like family NM058_01160 PF03788 LrgA family NM058_01165 PF01047 MarR family NM058_01170 PF00106 short chain dehydrogenase NM058_01175 PF00440 Bacterial regulatory proteins, tetR family NM058_01190 PF06271 RDD family NM058_01195 PF13411 MerR HTH family regulatory protein NM058_01205 PF17369 Family of unknown function (DUF5391) NM058_01210 PF00171 Aldehyde dehydrogenase family NM058_01230 PF00183 Hsp90 protein NM058_01255 PF07690 Major Facilitator Superfamily NM058_01260 PF10850 Protein of unknown function (DUF2653) NM058_01270 PF00248 Aldo/keto reductase family NM058_01275 PF00455 DeoR C terminal sensor domain NM058_01275 PF08220 DeoR-like helix-turn-helix domain NM058_01280 PF00171 Aldehyde dehydrogenase family NM058_01285 PF04962 KduI/IolB family NM058_01290 PF00294 pfkB family carbohydrate kinase NM058_01305 PF07690 Major Facilitator Superfamily NM058_01310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NM058_01310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NM058_01315 PF01261 Xylose isomerase-like TIM barrel NM058_01320 PF01261 Xylose isomerase-like TIM barrel NM058_01325 PF01116 Fructose-bisphosphate aldolase class-II NM058_01330 PF00072 Response regulator receiver domain NM058_01330 PF00486 Transcriptional regulatory protein, C terminal NM058_01355 PF01497 Periplasmic binding protein NM058_01375 PF11631 Protein of unknown function (DUF3255) NM058_01395 PF00296 Luciferase-like monooxygenase NM058_01400 PF00583 Acetyltransferase (GNAT) family NM058_01405 PF00497 Bacterial extracellular solute-binding proteins, family 3 NM058_01415 PF00005 ABC transporter NM058_01420 PF07687 Peptidase dimerisation domain NM058_01420 PF01546 Peptidase family M20/M25/M40 NM058_01425 PF03972 MmgE/PrpD family NM058_01435 PF06724 Domain of Unknown Function (DUF1206) NM058_01440 PF04198 Putative sugar-binding domain NM058_01445 PF01791 DeoC/LacD family aldolase NM058_01450 PF07662 Na+ dependent nucleoside transporter C-terminus NM058_01450 PF01773 Na+ dependent nucleoside transporter N-terminus NM058_01455 PF00591 Glycosyl transferase family, a/b domain NM058_01455 PF02885 Glycosyl transferase family, helical bundle domain NM058_01455 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NM058_01460 PF00324 Amino acid permease NM058_01475 PF01175 Urocanase Rossmann-like domain NM058_01475 PF17392 Urocanase C-terminal domain NM058_01475 PF17391 Urocanase N-terminal domain NM058_01480 PF00221 Aromatic amino acid lyase NM058_01485 PF09021 HutP NM058_01495 PF16369 C-terminal lipocalin-like domain NM058_01495 PF04616 Glycosyl hydrolases family 43 NM058_01515 PF00145 C-5 cytosine-specific DNA methylase NM058_01525 PF16888 Domain of unknown function (DUF5082) NM058_01535 PF14449 Pre-toxin TG NM058_01535 PF04740 LXG domain of WXG superfamily NM058_01575 PF00232 Glycosyl hydrolase family 1 NM058_01580 PF00582 Universal stress protein family NM058_01585 PF03741 Integral membrane protein TerC family NM058_01595 PF00892 EamA-like transporter family NM058_01630 PF10898 Protein of unknown function (DUF2716) NM058_01650 PF14176 YxiJ-like protein NM058_01685 PF13472 GDSL-like Lipase/Acylhydrolase family NM058_01690 PF03880 DbpA RNA binding domain NM058_01690 PF00270 DEAD/DEAH box helicase NM058_01690 PF00271 Helicase conserved C-terminal domain NM058_01695 PF11700 Vacuole effluxer Atg22 like NM058_01705 PF00874 PRD domain NM058_01705 PF03123 CAT RNA binding domain NM058_01710 PF02378 Phosphotransferase system, EIIC NM058_01710 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NM058_01710 PF00367 phosphotransferase system, EIIB NM058_01715 PF00232 Glycosyl hydrolase family 1 NM058_01720 PF00722 Glycosyl hydrolases family 16 NM058_01725 PF03600 Citrate transporter NM058_01730 PF00199 Catalase NM058_01730 PF06628 Catalase-related immune-responsive NM058_01730 PF18011 C-terminal domain found in long catalases NM058_01745 PF07662 Na+ dependent nucleoside transporter C-terminus NM058_01745 PF01773 Na+ dependent nucleoside transporter N-terminus NM058_01750 PF08241 Methyltransferase domain NM058_01760 PF01144 Coenzyme A transferase NM058_01765 PF01144 Coenzyme A transferase NM058_01775 PF01717 Cobalamin-independent synthase, Catalytic domain NM058_01785 PF04525 LURP-one-related NM058_01795 PF01546 Peptidase family M20/M25/M40 NM058_01795 PF07687 Peptidase dimerisation domain NM058_01800 PF00196 Bacterial regulatory proteins, luxR family NM058_01800 PF00072 Response regulator receiver domain NM058_01805 PF07730 Histidine kinase NM058_01815 PF16363 GDP-mannose 4,6 dehydratase NM058_01820 PF11611 Domain of unknown function (DUF4352) NM058_01825 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NM058_01825 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NM058_01830 PF00171 Aldehyde dehydrogenase family NM058_01850 PF01522 Polysaccharide deacetylase NM058_01860 PF03390 2-hydroxycarboxylate transporter family NM058_01865 PF01654 Cytochrome bd terminal oxidase subunit I NM058_01870 PF02322 Cytochrome bd terminal oxidase subunit II NM058_01875 PF00005 ABC transporter NM058_01875 PF00664 ABC transporter transmembrane region NM058_01880 PF00005 ABC transporter NM058_01880 PF00664 ABC transporter transmembrane region NM058_01890 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NM058_01895 PF04542 Sigma-70 region 2 NM058_01895 PF08281 Sigma-70, region 4 NM058_01900 PF17280 Family of unknown function (DUF5345) NM058_01910 PF13396 Phospholipase_D-nuclease N-terminal NM058_01915 PF13732 Domain of unknown function (DUF4162) NM058_01915 PF00005 ABC transporter NM058_01920 PF12679 ABC-2 family transporter protein NM058_01925 PF07690 Major Facilitator Superfamily NM058_01930 PF06628 Catalase-related immune-responsive NM058_01930 PF00199 Catalase NM058_01935 PF02245 Methylpurine-DNA glycosylase (MPG) NM058_01950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NM058_01965 PF02056 Family 4 glycosyl hydrolase NM058_01965 PF11975 Family 4 glycosyl hydrolase C-terminal domain NM058_01970 PF01063 Amino-transferase class IV NM058_01975 PF00106 short chain dehydrogenase NM058_01980 PF04914 DltD protein NM058_01985 PF00550 Phosphopantetheine attachment site NM058_01990 PF03062 MBOAT, membrane-bound O-acyltransferase family NM058_01995 PF13193 AMP-binding enzyme C-terminal domain NM058_01995 PF00501 AMP-binding enzyme NM058_02000 PF12459 D-Ala-teichoic acid biosynthesis protein NM058_02010 PF01040 UbiA prenyltransferase family NM058_02015 PF04607 Region found in RelA / SpoT proteins NM058_02020 PF07690 Major Facilitator Superfamily NM058_02050 PF09529 Integral membrane protein (intg_mem_TP0381) NM058_02060 PF03123 CAT RNA binding domain NM058_02060 PF00874 PRD domain NM058_02075 PF02378 Phosphotransferase system, EIIC NM058_02080 PF10924 Protein of unknown function (DUF2711) NM058_02085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NM058_02090 PF17785 PUA-like domain NM058_02090 PF10672 S-adenosylmethionine-dependent methyltransferase NM058_02095 PF09962 Uncharacterized conserved protein (DUF2196) NM058_02105 PF04172 LrgB-like family NM058_02110 PF03788 LrgA family NM058_02115 PF03466 LysR substrate binding domain NM058_02115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NM058_02120 PF02110 Hydroxyethylthiazole kinase family NM058_02125 PF02581 Thiamine monophosphate synthase NM058_02130 PF03239 Iron permease FTR1 family NM058_02145 PF01323 DSBA-like thioredoxin domain NM058_02150 PF00474 Sodium:solute symporter family NM058_02155 PF04341 Protein of unknown function, DUF485 NM058_02160 PF08671 Anti-repressor SinI NM058_02170 PF04138 GtrA-like protein NM058_02175 PF10509 Galactokinase galactose-binding signature NM058_02175 PF08544 GHMP kinases C terminal NM058_02175 PF00288 GHMP kinases N terminal domain NM058_02180 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NM058_02180 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NM058_02185 PF04226 Transglycosylase associated protein NM058_02190 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NM058_02190 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NM058_02195 PF00115 Cytochrome C and Quinol oxidase polypeptide I NM058_02200 PF00510 Cytochrome c oxidase subunit III NM058_02205 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NM058_02210 PF17368 Spore morphogenesis and germination YwcE NM058_02220 PF00881 Nitroreductase family NM058_02225 PF00296 Luciferase-like monooxygenase NM058_02230 PF13860 FlgD Ig-like domain NM058_02230 PF00082 Subtilase family NM058_02230 PF02225 PA domain NM058_02230 PF05922 Peptidase inhibitor I9 NM058_02265 PF08543 Phosphomethylpyrimidine kinase NM058_02270 PF00535 Glycosyl transferase family 2 NM058_02275 PF03167 Uracil DNA glycosylase superfamily NM058_02285 PF17261 Family of unknown function (DUF5327) NM058_02290 PF00860 Permease family NM058_02295 PF04241 Protein of unknown function (DUF423) NM058_02305 PF00535 Glycosyl transferase family 2 NM058_02310 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NM058_02325 PF00583 Acetyltransferase (GNAT) family NM058_02335 PF00483 Nucleotidyl transferase NM058_02340 PF16363 GDP-mannose 4,6 dehydratase NM058_02345 PF04321 RmlD substrate binding domain NM058_02350 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NM058_02355 PF17735 Biofilm surface layer A NM058_02360 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NM058_02360 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NM058_02365 PF00171 Aldehyde dehydrogenase family NM058_02370 PF01546 Peptidase family M20/M25/M40 NM058_02390 PF07883 Cupin domain NM058_02405 PF07690 Major Facilitator Superfamily NM058_02420 PF06778 Chlorite dismutase NM058_02425 PF01515 Phosphate acetyl/butaryl transferase NM058_02430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NM058_02430 PF03466 LysR substrate binding domain NM058_02435 PF03099 Biotin/lipoate A/B protein ligase family NM058_02445 PF00892 EamA-like transporter family NM058_02455 PF07293 Protein of unknown function (DUF1450) NM058_02460 PF01966 HD domain NM058_02470 PF02082 Transcriptional regulator NM058_02490 PF01047 MarR family NM058_02495 PF01361 Tautomerase enzyme NM058_02500 PF02163 Peptidase family M50 NM058_02505 PF08741 YwhD family NM058_02515 PF17284 Spermidine synthase tetramerisation domain NM058_02520 PF00491 Arginase family NM058_02530 PF11131 Rap-phr extracellular signalling NM058_02535 PF18801 response regulator aspartate phosphatase H, N terminal NM058_02555 PF00675 Insulinase (Peptidase family M16) NM058_02560 PF05193 Peptidase M16 inactive domain NM058_02570 PF00005 ABC transporter NM058_02580 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NM058_02580 PF13186 Iron-sulfur cluster-binding domain NM058_02580 PF04055 Radical SAM superfamily NM058_02590 PF11420 Bacteriocin subtilosin A NM058_02595 PF09148 Domain of unknown function (DUF1934) NM058_02600 PF03485 Arginyl tRNA synthetase N terminal domain NM058_02600 PF05746 DALR anticodon binding domain NM058_02600 PF00750 tRNA synthetases class I (R) NM058_02610 PF00325 Bacterial regulatory proteins, crp family NM058_02610 PF00027 Cyclic nucleotide-binding domain NM058_02615 PF14256 YwiC-like protein NM058_02625 PF01568 Molydopterin dinucleotide binding domain NM058_02625 PF00384 Molybdopterin oxidoreductase NM058_02625 PF14710 Respiratory nitrate reductase alpha N-terminal NM058_02630 PF14711 Respiratory nitrate reductase beta C-terminal NM058_02630 PF13247 4Fe-4S dicluster domain NM058_02640 PF02665 Nitrate reductase gamma subunit NM058_02655 PF00005 ABC transporter NM058_02655 PF00664 ABC transporter transmembrane region NM058_02660 PF01872 RibD C-terminal domain NM058_02670 PF03851 UV-endonuclease UvdE NM058_02675 PF13091 PLD-like domain NM058_02680 PF02754 Cysteine-rich domain NM058_02680 PF13183 4Fe-4S dicluster domain NM058_02685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NM058_02685 PF02770 Acyl-CoA dehydrogenase, middle domain NM058_02685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NM058_02690 PF05066 HB1, ASXL, restriction endonuclease HTH domain NM058_02700 PF10740 Domain of unknown function (DUF2529) NM058_02710 PF01116 Fructose-bisphosphate aldolase class-II NM058_02715 PF00923 Transaldolase/Fructose-6-phosphate aldolase NM058_02720 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NM058_02725 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NM058_02730 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NM058_02745 PF01197 Ribosomal protein L31 NM058_02750 PF00265 Thymidine kinase NM058_02755 PF00390 Malic enzyme, N-terminal domain NM058_02755 PF03949 Malic enzyme, NAD binding domain NM058_02760 PF03547 Membrane transport protein NM058_02765 PF13411 MerR HTH family regulatory protein NM058_02770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NM058_02775 PF00472 RF-1 domain NM058_02775 PF03462 PCRF domain NM058_02780 PF05175 Methyltransferase small domain NM058_02780 PF17827 PrmC N-terminal domain NM058_02785 PF17247 Family of unknown function (DUF5316) NM058_02790 PF17094 Uncharacterised protein family (UPF0715) NM058_02795 PF09551 Stage II sporulation protein R (spore_II_R) NM058_02805 PF03481 Putative GTP-binding controlling metal-binding NM058_02805 PF01300 Telomere recombination NM058_02810 PF02659 Putative manganese efflux pump NM058_02815 PF01451 Low molecular weight phosphotyrosine protein phosphatase NM058_02820 PF02502 Ribose/Galactose Isomerase NM058_02825 PF04260 Protein of unknown function (DUF436) NM058_02830 PF00464 Serine hydroxymethyltransferase NM058_02840 PF03899 ATP synthase I chain NM058_02845 PF00119 ATP synthase A chain NM058_02850 PF00137 ATP synthase subunit C NM058_02865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NM058_02865 PF00306 ATP synthase alpha/beta chain, C terminal domain NM058_02865 PF02874 ATP synthase alpha/beta family, beta-barrel domain NM058_02870 PF00231 ATP synthase NM058_02875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NM058_02875 PF02874 ATP synthase alpha/beta family, beta-barrel domain NM058_02880 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NM058_02880 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NM058_02890 PF06612 Protein of unknown function (DUF1146) NM058_02895 PF08680 TATA-box binding NM058_02900 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NM058_02905 PF08486 Stage II sporulation protein NM058_02910 PF00092 von Willebrand factor type A domain NM058_02915 PF00092 von Willebrand factor type A domain NM058_02925 PF02634 FdhD/NarQ family NM058_02930 PF06463 Molybdenum Cofactor Synthesis C NM058_02930 PF04055 Radical SAM superfamily NM058_02935 PF18801 response regulator aspartate phosphatase H, N terminal NM058_02935 PF17874 MalT-like TPR region NM058_02945 PF05532 CsbD-like NM058_02955 PF02653 Branched-chain amino acid transport system / permease component NM058_02965 PF00005 ABC transporter NM058_02965 PF12399 Branched-chain amino acid ATP-binding cassette transporter NM058_02970 PF00005 ABC transporter NM058_02975 PF00547 Urease, gamma subunit NM058_02980 PF00699 Urease beta subunit NM058_02985 PF01979 Amidohydrolase family NM058_02985 PF00449 Urease alpha-subunit, N-terminal domain NM058_02990 PF02082 Transcriptional regulator NM058_02995 PF13460 NAD(P)H-binding NM058_03005 PF13411 MerR HTH family regulatory protein NM058_03005 PF07739 TipAS antibiotic-recognition domain NM058_03015 PF17370 Family of unknown function (DUF5392) NM058_03020 PF08666 SAF domain NM058_03020 PF03102 NeuB family NM058_03035 PF02348 Cytidylyltransferase NM058_03040 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NM058_03055 PF17319 Family of unknown function (DUF5362) NM058_03060 PF00583 Acetyltransferase (GNAT) family NM058_03070 PF04892 VanZ like family NM058_03080 PF00543 Nitrogen regulatory protein P-II NM058_03085 PF00909 Ammonium Transporter Family NM058_03095 PF00857 Isochorismatase family NM058_03105 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NM058_03110 PF13229 Right handed beta helix region NM058_03120 PF01047 MarR family NM058_03130 PF12116 Stage III sporulation protein D NM058_03145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NM058_03145 PF00460 Flagella basal body rod protein NM058_03155 PF07977 FabA-like domain NM058_03160 PF01741 Large-conductance mechanosensitive channel, MscL NM058_03165 PF06580 Histidine kinase NM058_03165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_03175 PF00072 Response regulator receiver domain NM058_03175 PF04397 LytTr DNA-binding domain NM058_03190 PF00905 Penicillin binding protein transpeptidase domain NM058_03195 PF14183 YwpF-like protein NM058_03205 PF00436 Single-strand binding protein family NM058_03210 PF08220 DeoR-like helix-turn-helix domain NM058_03210 PF00455 DeoR C terminal sensor domain NM058_03220 PF00271 Helicase conserved C-terminal domain NM058_03220 PF12419 SNF2 Helicase protein NM058_03220 PF00176 SNF2 family N-terminal domain NM058_03225 PF04434 SWIM zinc finger NM058_03235 PF13807 G-rich domain on putative tyrosine kinase NM058_03235 PF02706 Chain length determinant protein NM058_03240 PF13614 AAA domain NM058_03250 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NM058_03250 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NM058_03250 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NM058_03255 PF16888 Domain of unknown function (DUF5082) NM058_03265 PF14431 YwqJ-like deaminase NM058_03265 PF14449 Pre-toxin TG NM058_03265 PF04740 LXG domain of WXG superfamily NM058_03290 PF03358 NADPH-dependent FMN reductase NM058_03300 PF02417 Chromate transporter NM058_03305 PF02417 Chromate transporter NM058_03310 PF01037 Lrp/AsnC ligand binding domain NM058_03310 PF13404 AsnC-type helix-turn-helix domain NM058_03320 PF13789 Domain of unknown function (DUF4181) NM058_03325 PF01613 Flavin reductase like domain NM058_03335 PF08757 CotH kinase protein NM058_03340 PF03466 LysR substrate binding domain NM058_03340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NM058_03345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NM058_03345 PF00205 Thiamine pyrophosphate enzyme, central domain NM058_03345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NM058_03350 PF03306 Alpha-acetolactate decarboxylase NM058_03360 PF13031 Protein of unknown function (DUF3892) NM058_03365 PF08239 Bacterial SH3 domain NM058_03375 PF02653 Branched-chain amino acid transport system / permease component NM058_03385 PF05025 RbsD / FucU transport protein family NM058_03390 PF00294 pfkB family carbohydrate kinase NM058_03400 PF08245 Mur ligase middle domain NM058_03405 PF14102 Capsule biosynthesis CapC NM058_03420 PF00877 NlpC/P60 family NM058_03430 PF03816 Cell envelope-related transcriptional attenuator domain NM058_03440 PF05504 Spore germination B3/ GerAC like, C-terminal NM058_03455 PF01238 Phosphomannose isomerase type I NM058_03465 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NM058_03470 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NM058_03475 PF08240 Alcohol dehydrogenase GroES-like domain NM058_03475 PF16912 Glucose dehydrogenase C-terminus NM058_03480 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NM058_03485 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NM058_03495 PF01467 Cytidylyltransferase-like NM058_03500 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NM058_03505 PF00483 Nucleotidyl transferase NM058_03510 PF16363 GDP-mannose 4,6 dehydratase NM058_03515 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NM058_03515 PF00535 Glycosyl transferase family 2 NM058_03520 PF01820 D-ala D-ala ligase N-terminus NM058_03520 PF07478 D-ala D-ala ligase C-terminus NM058_03525 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NM058_03530 PF00535 Glycosyl transferase family 2 NM058_03540 PF01061 ABC-2 type transporter NM058_03545 PF00005 ABC transporter NM058_03550 PF00483 Nucleotidyl transferase NM058_03560 PF00534 Glycosyl transferases group 1 NM058_03570 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 NM058_03570 PF00535 Glycosyl transferase family 2 NM058_03575 PF00535 Glycosyl transferase family 2 NM058_03575 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 NM058_03580 PF02350 UDP-N-acetylglucosamine 2-epimerase NM058_03605 PF00535 Glycosyl transferase family 2 NM058_03605 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 NM058_03610 PF02397 Bacterial sugar transferase NM058_03625 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NM058_03625 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NM058_03625 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NM058_03630 PF04932 O-Antigen ligase NM058_03635 PF02706 Chain length determinant protein NM058_03650 PF00953 Glycosyl transferase family 4 NM058_03660 PF01205 Uncharacterized protein family UPF0029 NM058_03660 PF09186 Domain of unknown function (DUF1949) NM058_03670 PF00196 Bacterial regulatory proteins, luxR family NM058_03670 PF00072 Response regulator receiver domain NM058_03675 PF02645 Uncharacterised protein, DegV family COG1307 NM058_03680 PF00271 Helicase conserved C-terminal domain NM058_03680 PF04851 Type III restriction enzyme, res subunit NM058_03685 PF10719 Late competence development protein ComFB NM058_03700 PF04316 Anti-sigma-28 factor, FlgM NM058_03705 PF05130 FlgN protein NM058_03710 PF00460 Flagella basal body rod protein NM058_03710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NM058_03715 PF00700 Bacterial flagellin C-terminal helical region NM058_03715 PF00669 Bacterial flagellin N-terminal helical region NM058_03725 PF02623 FliW protein NM058_03730 PF02599 Global regulator protein family NM058_03735 PF00669 Bacterial flagellin N-terminal helical region NM058_03735 PF00700 Bacterial flagellin C-terminal helical region NM058_03740 PF03646 FlaG protein NM058_03745 PF02465 Flagellar hook-associated protein 2 N-terminus NM058_03745 PF07195 Flagellar hook-associated protein 2 C-terminus NM058_03745 PF07196 Flagellin hook IN motif NM058_03750 PF02561 Flagellar protein FliS NM058_03765 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NM058_03765 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus NM058_03780 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NM058_03780 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NM058_03785 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NM058_03790 PF00005 ABC transporter NM058_03795 PF18075 FtsX extracellular domain NM058_03795 PF02687 FtsX-like permease family NM058_03800 PF01471 Putative peptidoglycan binding domain NM058_03800 PF03572 Peptidase family S41 NM058_03800 PF17820 PDZ domain NM058_03805 PF17423 Swarming motility protein NM058_03820 PF00440 Bacterial regulatory proteins, tetR family NM058_03835 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) NM058_03840 PF12344 Ultra-violet resistance protein B NM058_03840 PF04851 Type III restriction enzyme, res subunit NM058_03840 PF00271 Helicase conserved C-terminal domain NM058_03840 PF17757 UvrB interaction domain NM058_03840 PF02151 UvrB/uvrC motif NM058_03850 PF00669 Bacterial flagellin N-terminal helical region NM058_03850 PF00700 Bacterial flagellin C-terminal helical region NM058_03865 PF13349 Putative adhesin NM058_03870 PF04024 PspC domain NM058_03885 PF07690 Major Facilitator Superfamily NM058_03895 PF00149 Calcineurin-like phosphoesterase NM058_03900 PF07702 UTRA domain NM058_03900 PF00392 Bacterial regulatory proteins, gntR family NM058_03920 PF01790 Prolipoprotein diacylglyceryl transferase NM058_03925 PF07670 Nucleoside recognition NM058_03935 PF14602 Hexapeptide repeat of succinyl-transferase NM058_03940 PF03211 Pectate lyase NM058_03945 PF13529 Peptidase_C39 like family NM058_03965 PF00475 Imidazoleglycerol-phosphate dehydratase NM058_03975 PF00977 Histidine biosynthesis protein NM058_03980 PF00977 Histidine biosynthesis protein NM058_03985 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NM058_03985 PF01502 Phosphoribosyl-AMP cyclohydrolase NM058_04005 PF00005 ABC transporter NM058_04005 PF00664 ABC transporter transmembrane region NM058_04015 PF00877 NlpC/P60 family NM058_04020 PF07992 Pyridine nucleotide-disulphide oxidoreductase NM058_04025 PF00293 NUDIX domain NM058_04030 PF03668 P-loop ATPase protein family NM058_04035 PF01933 Uncharacterised protein family UPF0052 NM058_04045 PF00381 PTS HPr component phosphorylation site NM058_04050 PF00797 N-acetyltransferase NM058_04060 PF00072 Response regulator receiver domain NM058_04060 PF00486 Transcriptional regulatory protein, C terminal NM058_04065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_04075 PF02687 FtsX-like permease family NM058_04085 PF00484 Carbonic anhydrase NM058_04090 PF00916 Sulfate permease family NM058_04090 PF01740 STAS domain NM058_04105 PF00356 Bacterial regulatory proteins, lacI family NM058_04115 PF13416 Bacterial extracellular solute-binding protein NM058_04120 PF00528 Binding-protein-dependent transport system inner membrane component NM058_04125 PF00528 Binding-protein-dependent transport system inner membrane component NM058_04135 PF03633 Glycosyl hydrolase family 65, C-terminal domain NM058_04135 PF03636 Glycosyl hydrolase family 65, N-terminal domain NM058_04135 PF03632 Glycosyl hydrolase family 65 central catalytic domain NM058_04145 PF13419 Haloacid dehalogenase-like hydrolase NM058_04150 PF00574 Clp protease NM058_04160 PF11553 Protein of unknown function (DUF3231) NM058_04165 PF00893 Small Multidrug Resistance protein NM058_04170 PF00893 Small Multidrug Resistance protein NM058_04175 PF00440 Bacterial regulatory proteins, tetR family NM058_04175 PF17934 Tetracyclin repressor-like, C-terminal domain NM058_04180 PF13520 Amino acid permease NM058_04185 PF08244 Glycosyl hydrolases family 32 C terminal NM058_04185 PF00251 Glycosyl hydrolases family 32 N-terminal domain NM058_04190 PF02435 Levansucrase/Invertase NM058_04200 PF00144 Beta-lactamase NM058_04200 PF11954 Domain of unknown function (DUF3471) NM058_04205 PF01177 Asp/Glu/Hydantoin racemase NM058_04215 PF05870 Phenolic acid decarboxylase (PAD) NM058_04230 PF08671 Anti-repressor SinI NM058_04230 PF01381 Helix-turn-helix NM058_04245 PF02719 Polysaccharide biosynthesis protein NM058_04250 PF00534 Glycosyl transferases group 1 NM058_04250 PF13439 Glycosyltransferase Family 4 NM058_04255 PF00535 Glycosyl transferase family 2 NM058_04260 PF00534 Glycosyl transferases group 1 NM058_04260 PF13439 Glycosyltransferase Family 4 NM058_04270 PF00535 Glycosyl transferase family 2 NM058_04275 PF04230 Polysaccharide pyruvyl transferase NM058_04290 PF02397 Bacterial sugar transferase NM058_04295 PF17836 PglD N-terminal domain NM058_04295 PF00132 Bacterial transferase hexapeptide (six repeats) NM058_04305 PF04230 Polysaccharide pyruvyl transferase NM058_04310 PF09628 YvfG protein NM058_04315 PF00309 Sigma-54 factor, Activator interacting domain (AID) NM058_04315 PF04963 Sigma-54 factor, core binding domain NM058_04315 PF04552 Sigma-54, DNA binding domain NM058_04325 PF07729 FCD domain NM058_04325 PF00392 Bacterial regulatory proteins, gntR family NM058_04330 PF00356 Bacterial regulatory proteins, lacI family NM058_04340 PF00528 Binding-protein-dependent transport system inner membrane component NM058_04345 PF00528 Binding-protein-dependent transport system inner membrane component NM058_04350 PF02449 Beta-galactosidase NM058_04350 PF08532 Beta-galactosidase trimerisation domain NM058_04350 PF08533 Beta-galactosidase C-terminal domain NM058_04355 PF07745 Glycosyl hydrolase family 53 NM058_04360 PF13426 PAS domain NM058_04360 PF07228 Stage II sporulation protein E (SpoIIE) NM058_04390 PF02754 Cysteine-rich domain NM058_04395 PF11870 Domain of unknown function (DUF3390) NM058_04395 PF13183 4Fe-4S dicluster domain NM058_04395 PF02589 LUD domain NM058_04400 PF02589 LUD domain NM058_04405 PF00704 Glycosyl hydrolases family 18 NM058_04410 PF00324 Amino acid permease NM058_04420 PF03466 LysR substrate binding domain NM058_04420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NM058_04425 PF00296 Luciferase-like monooxygenase NM058_04430 PF00392 Bacterial regulatory proteins, gntR family NM058_04435 PF00083 Sugar (and other) transporter NM058_04440 PF04198 Putative sugar-binding domain NM058_04450 PF00162 Phosphoglycerate kinase NM058_04455 PF00121 Triosephosphate isomerase NM058_04460 PF01676 Metalloenzyme superfamily NM058_04460 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NM058_04465 PF03952 Enolase, N-terminal domain NM058_04465 PF00113 Enolase, C-terminal TIM barrel domain NM058_04470 PF00583 Acetyltransferase (GNAT) family NM058_04475 PF13240 zinc-ribbon domain NM058_04485 PF11724 YvbH-like oligomerisation region NM058_04485 PF08000 Bacterial PH domain NM058_04490 PF12802 MarR family NM058_04500 PF00528 Binding-protein-dependent transport system inner membrane component NM058_04505 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NM058_04510 PF00528 Binding-protein-dependent transport system inner membrane component NM058_04525 PF00528 Binding-protein-dependent transport system inner membrane component NM058_04530 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NM058_04535 PF00528 Binding-protein-dependent transport system inner membrane component NM058_04540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NM058_04540 PF00672 HAMP domain NM058_04540 PF12729 Four helix bundle sensory module for signal transduction NM058_04545 PF01638 HxlR-like helix-turn-helix NM058_04570 PF03840 Preprotein translocase SecG subunit NM058_04575 PF12146 Serine aminopeptidase, S33 NM058_04580 PF00575 S1 RNA binding domain NM058_04580 PF00773 RNB domain NM058_04580 PF08206 Ribonuclease B OB domain NM058_04580 PF17876 Cold shock domain NM058_04585 PF01668 SmpB protein NM058_04605 PF00106 short chain dehydrogenase NM058_04610 PF00440 Bacterial regulatory proteins, tetR family NM058_04615 PF00893 Small Multidrug Resistance protein NM058_04620 PF17314 Family of unknown function (DUF5360) NM058_04630 PF02525 Flavodoxin-like fold NM058_04640 PF02583 Metal-sensitive transcriptional repressor NM058_04645 PF00403 Heavy-metal-associated domain NM058_04650 PF00403 Heavy-metal-associated domain NM058_04660 PF13462 Thioredoxin NM058_04665 PF02600 Disulfide bond formation protein DsbB NM058_04685 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NM058_04685 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NM058_04700 PF00248 Aldo/keto reductase family NM058_04705 PF00528 Binding-protein-dependent transport system inner membrane component NM058_04715 PF12727 PBP superfamily domain NM058_04715 PF12728 Helix-turn-helix domain NM058_04720 PF00884 Sulfatase NM058_04725 PF04307 LexA-binding, inner membrane-associated putative hydrolase NM058_04730 PF09575 Small spore protein J (Spore_SspJ) NM058_04735 PF13520 Amino acid permease NM058_04755 PF01497 Periplasmic binding protein NM058_04760 PF01032 FecCD transport family NM058_04775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NM058_04780 PF00005 ABC transporter NM058_04785 PF02687 FtsX-like permease family NM058_04785 PF12704 MacB-like periplasmic core domain NM058_04800 PF12841 YvrJ protein family NM058_04805 PF04545 Sigma-70, region 4 NM058_04815 PF00072 Response regulator receiver domain NM058_04815 PF00486 Transcriptional regulatory protein, C terminal NM058_04820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_04820 PF00512 His Kinase A (phospho-acceptor) domain NM058_04825 PF08450 SMP-30/Gluconolactonase/LRE-like region NM058_04835 PF01497 Periplasmic binding protein NM058_04850 PF01923 Cobalamin adenosyltransferase NM058_04865 PF04012 PspA/IM30 family NM058_04870 PF13349 Putative adhesin NM058_04880 PF07730 Histidine kinase NM058_04880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_04880 PF00672 HAMP domain NM058_04885 PF00072 Response regulator receiver domain NM058_04885 PF00196 Bacterial regulatory proteins, luxR family NM058_04890 PF05504 Spore germination B3/ GerAC like, C-terminal NM058_04895 PF03845 Spore germination protein NM058_04900 PF03323 Bacillus/Clostridium GerA spore germination protein NM058_04905 PF13113 Protein of unknown function (DUF3970) NM058_04910 PF10415 Fumarase C C-terminus NM058_04910 PF00206 Lyase NM058_04915 PF00440 Bacterial regulatory proteins, tetR family NM058_04925 PF00512 His Kinase A (phospho-acceptor) domain NM058_04925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_04925 PF00672 HAMP domain NM058_04930 PF00486 Transcriptional regulatory protein, C terminal NM058_04930 PF00072 Response regulator receiver domain NM058_04935 PF13180 PDZ domain NM058_04940 PF00210 Ferritin-like domain NM058_04945 PF00106 short chain dehydrogenase NM058_04955 PF14039 YusW-like protein NM058_04960 PF00005 ABC transporter NM058_04965 PF10835 Protein of unknown function (DUF2573) NM058_04970 PF03466 LysR substrate binding domain NM058_04970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NM058_04980 PF14552 Tautomerase enzyme NM058_04990 PF01047 MarR family NM058_04995 PF07875 Coat F domain NM058_05005 PF01619 Proline dehydrogenase NM058_05020 PF00108 Thiolase, N-terminal domain NM058_05020 PF02803 Thiolase, C-terminal domain NM058_05030 PF03960 ArsC family NM058_05035 PF01597 Glycine cleavage H-protein NM058_05040 PF10830 Protein of unknown function (DUF2553) NM058_05045 PF01751 Toprim domain NM058_05050 PF00085 Thioredoxin NM058_05055 PF02036 SCP-2 sterol transfer family NM058_05060 PF09383 NIL domain NM058_05060 PF00005 ABC transporter NM058_05065 PF00528 Binding-protein-dependent transport system inner membrane component NM058_05070 PF03180 NLPA lipoprotein NM058_05075 PF02627 Carboxymuconolactone decarboxylase family NM058_05085 PF00005 ABC transporter NM058_05090 PF01458 Uncharacterized protein family (UPF0051) NM058_05100 PF01592 NifU-like N terminal domain NM058_05105 PF01458 Uncharacterized protein family (UPF0051) NM058_05115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NM058_05130 PF01266 FAD dependent oxidoreductase NM058_05135 PF01541 GIY-YIG catalytic domain NM058_05140 PF01380 SIS domain NM058_05145 PF01547 Bacterial extracellular solute-binding protein NM058_05155 PF00528 Binding-protein-dependent transport system inner membrane component NM058_05165 PF07702 UTRA domain NM058_05165 PF00392 Bacterial regulatory proteins, gntR family NM058_05170 PF03459 TOBE domain NM058_05170 PF17912 MalK OB fold domain NM058_05170 PF00005 ABC transporter NM058_05175 PF04231 Endonuclease I NM058_05190 PF00266 Aminotransferase class-V NM058_05195 PF13478 XdhC Rossmann domain NM058_05195 PF02625 XdhC and CoxI family NM058_05200 PF12804 MobA-like NTP transferase domain NM058_05205 PF00941 FAD binding domain in molybdopterin dehydrogenase NM058_05210 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NM058_05210 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NM058_05215 PF01799 [2Fe-2S] binding domain NM058_05215 PF00111 2Fe-2S iron-sulfur cluster binding domain NM058_05220 PF09680 Family of unknown function NM058_05235 PF09680 Family of unknown function NM058_05245 PF00576 HIUase/Transthyretin family NM058_05260 PF00860 Permease family NM058_05265 PF13556 PucR C-terminal helix-turn-helix domain NM058_05265 PF07905 Purine catabolism regulatory protein-like family NM058_05265 PF17853 GGDEF-like domain NM058_05270 PF01979 Amidohydrolase family NM058_05280 PF01904 Protein of unknown function DUF72 NM058_05285 PF01925 Sulfite exporter TauE/SafE NM058_05290 PF02872 5'-nucleotidase, C-terminal domain NM058_05295 PF08827 Domain of unknown function (DUF1805) NM058_05300 PF09560 Sporulation protein YunB (Spo_YunB) NM058_05310 PF04055 Radical SAM superfamily NM058_05310 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NM058_05315 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NM058_05320 PF06265 Protein of unknown function (DUF1027) NM058_05325 PF01934 Protein of unknown function DUF86 NM058_05330 PF13344 Haloacid dehalogenase-like hydrolase NM058_05335 PF04608 Phosphatidylglycerophosphatase A NM058_05345 PF00742 Homoserine dehydrogenase NM058_05345 PF01842 ACT domain NM058_05345 PF03447 Homoserine dehydrogenase, NAD binding domain NM058_05355 PF08544 GHMP kinases C terminal NM058_05355 PF00288 GHMP kinases N terminal domain NM058_05360 PF07676 WD40-like Beta Propeller Repeat NM058_05360 PF00326 Prolyl oligopeptidase family NM058_05370 PF07315 Protein of unknown function (DUF1462) NM058_05375 PF07992 Pyridine nucleotide-disulphide oxidoreductase NM058_05380 PF07293 Protein of unknown function (DUF1450) NM058_05390 PF01678 Diaminopimelate epimerase NM058_05400 PF00583 Acetyltransferase (GNAT) family NM058_05405 PF04299 Putative FMN-binding domain NM058_05410 PF00478 IMP dehydrogenase / GMP reductase domain NM058_05420 PF07992 Pyridine nucleotide-disulphide oxidoreductase NM058_05430 PF17302 Family of unknown function (DUF5351) NM058_05435 PF14068 Putative membrane protein NM058_05440 PF06725 3D domain NM058_05445 PF02681 Divergent PAP2 family NM058_05455 PF03553 Na+/H+ antiporter family NM058_05455 PF13726 Na+-H+ antiporter family NM058_05460 PF02632 BioY family NM058_05470 PF00756 Putative esterase NM058_05475 PF00106 short chain dehydrogenase NM058_05480 PF00425 chorismate binding enzyme NM058_05485 PF13193 AMP-binding enzyme C-terminal domain NM058_05485 PF00501 AMP-binding enzyme NM058_05490 PF00550 Phosphopantetheine attachment site NM058_05490 PF00857 Isochorismatase family NM058_05500 PF03621 MbtH-like protein NM058_05505 PF10042 Uncharacterized conserved protein (DUF2278) NM058_05510 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NM058_05510 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NM058_05515 PF17853 GGDEF-like domain NM058_05515 PF06018 CodY GAF-like domain NM058_05515 PF13556 PucR C-terminal helix-turn-helix domain NM058_05520 PF06013 Proteins of 100 residues with WXG NM058_05525 PF08817 WXG100 protein secretion system (Wss), protein YukD NM058_05535 PF01580 FtsK/SpoIIIE family NM058_05535 PF12538 DNA transporter NM058_05550 PF17355 Family of unknown function (DUF5383) NM058_05555 PF00106 short chain dehydrogenase NM058_05560 PF01966 HD domain NM058_05565 PF10842 Protein of unknown function (DUF2642) NM058_05575 PF01594 AI-2E family transporter NM058_05580 PF10676 Spore germination protein gerPA/gerPF NM058_05585 PF14166 YueH-like protein NM058_05595 PF00857 Isochorismatase family NM058_05600 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NM058_05600 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain NM058_05600 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NM058_05605 PF00563 EAL domain NM058_05605 PF08668 HDOD domain NM058_05620 PF08181 DegQ (SacQ) family NM058_05625 PF00348 Polyprenyl synthetase NM058_05635 PF07730 Histidine kinase NM058_05635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_05640 PF00072 Response regulator receiver domain NM058_05640 PF00196 Bacterial regulatory proteins, luxR family NM058_05645 PF03061 Thioesterase superfamily NM058_05650 PF03334 Na+/H+ antiporter subunit NM058_05655 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NM058_05665 PF00361 Proton-conducting membrane transporter NM058_05670 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NM058_05675 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NM058_05680 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NM058_05680 PF13244 Domain of unknown function (DUF4040) NM058_05680 PF00361 Proton-conducting membrane transporter NM058_05690 PF03390 2-hydroxycarboxylate transporter family NM058_05695 PF02653 Branched-chain amino acid transport system / permease component NM058_05710 PF02608 ABC transporter substrate-binding protein PnrA-like NM058_05715 PF00072 Response regulator receiver domain NM058_05720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_05720 PF17203 Single cache domain 3 NM058_05720 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NM058_05720 PF00989 PAS fold NM058_05725 PF17328 Family of unknown function (DUF5366) NM058_05730 PF04134 Protein of unknown function, DUF393 NM058_05740 PF07690 Major Facilitator Superfamily NM058_05750 PF00929 Exonuclease NM058_05755 PF08810 Kinase associated protein B NM058_05760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_05760 PF00512 His Kinase A (phospho-acceptor) domain NM058_05765 PF00155 Aminotransferase class I and II NM058_05770 PF08958 Domain of unknown function (DUF1871) NM058_05775 PF08386 TAP-like protein NM058_05775 PF00561 alpha/beta hydrolase fold NM058_05780 PF01037 Lrp/AsnC ligand binding domain NM058_05785 PF00155 Aminotransferase class I and II NM058_05795 PF04070 Domain of unknown function (DUF378) NM058_05805 PF00465 Iron-containing alcohol dehydrogenase NM058_05810 PF00342 Phosphoglucose isomerase NM058_05820 PF08868 YugN-like family NM058_05830 PF11458 Membrane-integrating protein Mistic NM058_05840 PF04298 Putative neutral zinc metallopeptidase NM058_05845 PF01595 Cyclin M transmembrane N-terminal domain NM058_05845 PF00571 CBS domain NM058_05845 PF03471 Transporter associated domain NM058_05850 PF00128 Alpha amylase, catalytic domain NM058_05850 PF16657 Maltogenic Amylase, C-terminal domain NM058_05855 PF01894 Uncharacterised protein family UPF0047 NM058_05875 PF02743 Cache domain NM058_05875 PF00672 HAMP domain NM058_05875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NM058_05885 PF02743 Cache domain NM058_05885 PF00672 HAMP domain NM058_05885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NM058_05890 PF02743 Cache domain NM058_05890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NM058_05890 PF00672 HAMP domain NM058_05900 PF00455 DeoR C terminal sensor domain NM058_05900 PF08220 DeoR-like helix-turn-helix domain NM058_05905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NM058_05905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NM058_05910 PF05336 L-rhamnose mutarotase NM058_05915 PF06134 L-rhamnose isomerase (RhaA) NM058_05920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NM058_05920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NM058_05930 PF02673 Bacitracin resistance protein BacA NM058_05945 PF07690 Major Facilitator Superfamily NM058_05950 PF13457 GW (Gly-Tryp) dipeptide domain NM058_05950 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NM058_05955 PF05360 yiaA/B two helix domain NM058_05960 PF02386 Cation transport protein NM058_05965 PF02254 TrkA-N domain NM058_05965 PF02080 TrkA-C domain NM058_05970 PF17735 Biofilm surface layer A NM058_05980 PF00171 Aldehyde dehydrogenase family NM058_05985 PF00465 Iron-containing alcohol dehydrogenase NM058_05995 PF12867 DinB superfamily NM058_06010 PF00583 Acetyltransferase (GNAT) family NM058_06015 PF09515 Thiamine transporter protein (Thia_YuaJ) NM058_06145 PF00483 Nucleotidyl transferase NM058_06160 PF00343 Carbohydrate phosphorylase NM058_06165 PF03073 TspO/MBR family NM058_06170 PF01258 Prokaryotic dksA/traR C4-type zinc finger NM058_06180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NM058_06180 PF16582 Middle domain of thiamine pyrophosphate NM058_06180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NM058_06185 PF00561 alpha/beta hydrolase fold NM058_06190 PF00378 Enoyl-CoA hydratase/isomerase NM058_06195 PF13193 AMP-binding enzyme C-terminal domain NM058_06195 PF00501 AMP-binding enzyme NM058_06200 PF13378 Enolase C-terminal domain-like NM058_06200 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NM058_06205 PF01297 Zinc-uptake complex component A periplasmic NM058_06210 PF00005 ABC transporter NM058_06220 PF00950 ABC 3 transport family NM058_06225 PF07561 Domain of Unknown Function (DUF1540) NM058_06230 PF02322 Cytochrome bd terminal oxidase subunit II NM058_06240 PF01197 Ribosomal protein L31 NM058_06245 PF00484 Carbonic anhydrase NM058_06250 PF01809 Putative membrane protein insertion efficiency factor NM058_06255 PF02664 S-Ribosylhomocysteinase (LuxS) NM058_06260 PF13115 YtkA-like NM058_06270 PF00210 Ferritin-like domain NM058_06275 PF05105 Bacteriophage holin family NM058_06280 PF00293 NUDIX domain NM058_06290 PF00005 ABC transporter NM058_06300 PF00326 Prolyl oligopeptidase family NM058_06305 PF10763 Protein of unknown function (DUF2584) NM058_06310 PF01293 Phosphoenolpyruvate carboxykinase NM058_06320 PF00733 Asparagine synthase NM058_06320 PF13537 Glutamine amidotransferase domain NM058_06325 PF00324 Amino acid permease NM058_06330 PF00132 Bacterial transferase hexapeptide (six repeats) NM058_06335 PF12146 Serine aminopeptidase, S33 NM058_06340 PF10776 Protein of unknown function (DUF2600) NM058_06345 PF06962 Putative rRNA methylase NM058_06350 PF04055 Radical SAM superfamily NM058_06350 PF16199 Radical_SAM C-terminal domain NM058_06355 PF10732 Protein of unknown function (DUF2524) NM058_06365 PF00392 Bacterial regulatory proteins, gntR family NM058_06370 PF00005 ABC transporter NM058_06390 PF02687 FtsX-like permease family NM058_06390 PF12704 MacB-like periplasmic core domain NM058_06395 PF00486 Transcriptional regulatory protein, C terminal NM058_06395 PF00072 Response regulator receiver domain NM058_06405 PF00005 ABC transporter NM058_06410 PF02687 FtsX-like permease family NM058_06420 PF07690 Major Facilitator Superfamily NM058_06425 PF01740 STAS domain NM058_06425 PF13426 PAS domain NM058_06430 PF14074 Protein of unknown function (DUF4257) NM058_06440 PF00581 Rhodanese-like domain NM058_06450 PF00528 Binding-protein-dependent transport system inner membrane component NM058_06465 PF00356 Bacterial regulatory proteins, lacI family NM058_06470 PF01738 Dienelactone hydrolase family NM058_06480 PF03744 6-carboxyhexanoate--CoA ligase NM058_06485 PF00202 Aminotransferase class-III NM058_06490 PF00155 Aminotransferase class I and II NM058_06500 PF06968 Biotin and Thiamin Synthesis associated domain NM058_06500 PF04055 Radical SAM superfamily NM058_06505 PF00067 Cytochrome P450 NM058_06510 PF01370 NAD dependent epimerase/dehydratase family NM058_06520 PF13416 Bacterial extracellular solute-binding protein NM058_06550 PF04854 Protein of unknown function, DUF624 NM058_06555 PF10957 Sporulation protein Cse60 NM058_06570 PF14667 Polysaccharide biosynthesis C-terminal domain NM058_06570 PF01943 Polysaccharide biosynthesis protein NM058_06575 PF00849 RNA pseudouridylate synthase NM058_06575 PF01479 S4 domain NM058_06580 PF08220 DeoR-like helix-turn-helix domain NM058_06590 PF05975 Bacterial ABC transporter protein EcsB NM058_06605 PF00291 Pyridoxal-phosphate dependent enzyme NM058_06620 PF00781 Diacylglycerol kinase catalytic domain NM058_06635 PF14165 YtzH-like protein NM058_06640 PF02390 Putative methyltransferase NM058_06645 PF00753 Metallo-beta-lactamase superfamily NM058_06655 PF03413 Peptidase propeptide and YPEB domain NM058_06665 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ NM058_06675 PF00085 Thioredoxin NM058_06680 PF07285 Protein of unknown function (DUF1444) NM058_06685 PF14794 Domain of unknown function (DUF4479) NM058_06685 PF01588 Putative tRNA binding domain NM058_06695 PF01225 Mur ligase family, catalytic domain NM058_06695 PF02875 Mur ligase family, glutamate ligase domain NM058_06695 PF08245 Mur ligase middle domain NM058_06700 PF06103 Bacterial protein of unknown function (DUF948) NM058_06705 PF12732 YtxH-like protein NM058_06710 PF11009 Protein of unknown function (DUF2847) NM058_06730 PF13677 Membrane MotB of proton-channel complex MotA/MotB NM058_06730 PF00691 OmpA family NM058_06735 PF00850 Histone deacetylase domain NM058_06740 PF00571 CBS domain NM058_06745 PF00583 Acetyltransferase (GNAT) family NM058_06750 PF13193 AMP-binding enzyme C-terminal domain NM058_06750 PF00501 AMP-binding enzyme NM058_06755 PF00579 tRNA synthetases class I (W and Y) NM058_06755 PF01479 S4 domain NM058_06760 PF00163 Ribosomal protein S4/S9 N-terminal domain NM058_06760 PF01479 S4 domain NM058_06765 PF00990 Diguanylate cyclase, GGDEF domain NM058_06770 PF13185 GAF domain NM058_06775 PF00440 Bacterial regulatory proteins, tetR family NM058_06780 PF02811 PHP domain NM058_06785 PF06160 Septation ring formation regulator, EzrA NM058_06790 PF05525 Branched-chain amino acid transport protein NM058_06800 PF02568 Thiamine biosynthesis protein (ThiI) NM058_06800 PF02926 THUMP domain NM058_06805 PF00269 Small, acid-soluble spore proteins, alpha/beta type NM058_06810 PF00501 AMP-binding enzyme NM058_06810 PF13193 AMP-binding enzyme C-terminal domain NM058_06825 PF01343 Peptidase family S49 NM058_06830 PF06271 RDD family NM058_06845 PF08534 Redoxin NM058_06850 PF02384 N-6 DNA Methylase NM058_06855 PF00871 Acetokinase family NM058_06865 PF00764 Arginosuccinate synthase NM058_06870 PF00206 Lyase NM058_06870 PF14698 Argininosuccinate lyase C-terminal NM058_06890 PF00583 Acetyltransferase (GNAT) family NM058_06895 PF00497 Bacterial extracellular solute-binding proteins, family 3 NM058_06900 PF00497 Bacterial extracellular solute-binding proteins, family 3 NM058_06905 PF00528 Binding-protein-dependent transport system inner membrane component NM058_06910 PF00528 Binding-protein-dependent transport system inner membrane component NM058_06915 PF00005 ABC transporter NM058_06920 PF00296 Luciferase-like monooxygenase NM058_06930 PF00296 Luciferase-like monooxygenase NM058_06935 PF01687 Riboflavin kinase NM058_06945 PF01925 Sulfite exporter TauE/SafE NM058_06950 PF03061 Thioesterase superfamily NM058_06950 PF07085 DRTGG domain NM058_06950 PF00392 Bacterial regulatory proteins, gntR family NM058_06950 PF00571 CBS domain NM058_06955 PF14007 YtpI-like protein NM058_06960 PF02272 DHHA1 domain NM058_06960 PF01368 DHH family NM058_06975 PF14034 Sporulation protein YtrH NM058_06980 PF02811 PHP domain NM058_06980 PF14579 Helix-hairpin-helix motif NM058_06980 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NM058_06980 PF07733 Bacterial DNA polymerase III alpha NTPase domain NM058_06980 PF01336 OB-fold nucleic acid binding domain NM058_06985 PF03949 Malic enzyme, NAD binding domain NM058_06985 PF00390 Malic enzyme, N-terminal domain NM058_06990 PF01039 Carboxyl transferase domain NM058_06990 PF17848 Acetyl-coA carboxylase zinc finger domain NM058_07000 PF00365 Phosphofructokinase NM058_07005 PF00391 PEP-utilising enzyme, mobile domain NM058_07005 PF02887 Pyruvate kinase, alpha/beta domain NM058_07005 PF00224 Pyruvate kinase, barrel domain NM058_07010 PF04186 FxsA cytoplasmic membrane protein NM058_07015 PF01594 AI-2E family transporter NM058_07020 PF01594 AI-2E family transporter NM058_07025 PF01594 AI-2E family transporter NM058_07030 PF04284 Protein of unknown function (DUF441) NM058_07035 PF00285 Citrate synthase, C-terminal domain NM058_07040 PF00180 Isocitrate/isopropylmalate dehydrogenase NM058_07045 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NM058_07045 PF00056 lactate/malate dehydrogenase, NAD binding domain NM058_07050 PF00072 Response regulator receiver domain NM058_07050 PF00486 Transcriptional regulatory protein, C terminal NM058_07065 PF06827 Zinc finger found in FPG and IleRS NM058_07065 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NM058_07065 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NM058_07070 PF02659 Putative manganese efflux pump NM058_07075 PF01121 Dephospho-CoA kinase NM058_07080 PF00248 Aldo/keto reductase family NM058_07085 PF07690 Major Facilitator Superfamily NM058_07100 PF02675 S-adenosylmethionine decarboxylase NM058_07110 PF07261 Replication initiation and membrane attachment NM058_07120 PF09335 SNARE associated Golgi protein NM058_07125 PF08812 YtxC-like family NM058_07130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NM058_07130 PF02824 TGS domain NM058_07130 PF03129 Anticodon binding domain NM058_07130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NM058_07135 PF13419 Haloacid dehalogenase-like hydrolase NM058_07140 PF07694 5TMR of 5TMR-LYT NM058_07140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_07140 PF06580 Histidine kinase NM058_07150 PF03788 LrgA family NM058_07155 PF04172 LrgB-like family NM058_07165 PF00707 Translation initiation factor IF-3, C-terminal domain NM058_07165 PF05198 Translation initiation factor IF-3, N-terminal domain NM058_07170 PF01632 Ribosomal protein L35 NM058_07190 PF05343 M42 glutamyl aminopeptidase NM058_07195 PF04616 Glycosyl hydrolases family 43 NM058_07200 PF02610 L-arabinose isomerase NM058_07200 PF11762 L-arabinose isomerase C-terminal domain NM058_07205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NM058_07205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NM058_07210 PF00596 Class II Aldolase and Adducin N-terminal domain NM058_07220 PF13685 Iron-containing alcohol dehydrogenase NM058_07230 PF00528 Binding-protein-dependent transport system inner membrane component NM058_07240 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NM058_07245 PF03551 Transcriptional regulator PadR-like family NM058_07270 PF12681 Glyoxalase-like domain NM058_07280 PF02913 FAD linked oxidases, C-terminal domain NM058_07280 PF01565 FAD binding domain NM058_07285 PF05651 Putative sugar diacid recognition NM058_07285 PF17853 GGDEF-like domain NM058_07285 PF13556 PucR C-terminal helix-turn-helix domain NM058_07290 PF14098 Small, acid-soluble spore protein I NM058_07295 PF00588 SpoU rRNA Methylase family NM058_07295 PF08032 RNA 2'-O ribose methyltransferase substrate binding NM058_07305 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NM058_07305 PF01409 tRNA synthetases class II core domain (F) NM058_07315 PF01351 Ribonuclease HII NM058_07315 PF11858 Domain of unknown function (DUF3378) NM058_07320 PF05164 Cell division protein ZapA NM058_07325 PF02674 Colicin V production protein NM058_07340 PF03994 Domain of Unknown Function (DUF350) NM058_07345 PF13193 AMP-binding enzyme C-terminal domain NM058_07345 PF00501 AMP-binding enzyme NM058_07350 PF00440 Bacterial regulatory proteins, tetR family NM058_07350 PF08359 YsiA-like protein, C-terminal region NM058_07365 PF00766 Electron transfer flavoprotein FAD-binding domain NM058_07365 PF01012 Electron transfer flavoprotein domain NM058_07375 PF00085 Thioredoxin NM058_07380 PF01541 GIY-YIG catalytic domain NM058_07380 PF08459 UvrC Helix-hairpin-helix N-terminal NM058_07380 PF02151 UvrB/uvrC motif NM058_07385 PF00696 Amino acid kinase family NM058_07385 PF13840 ACT domain NM058_07385 PF01842 ACT domain NM058_07390 PF10702 Protein of unknown function (DUF2507) NM058_07395 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NM058_07400 PF02910 Fumarate reductase flavoprotein C-term NM058_07400 PF00890 FAD binding domain NM058_07405 PF13183 4Fe-4S dicluster domain NM058_07405 PF13085 2Fe-2S iron-sulfur cluster binding domain NM058_07415 PF00196 Bacterial regulatory proteins, luxR family NM058_07420 PF01047 MarR family NM058_07425 PF01177 Asp/Glu/Hydantoin racemase NM058_07430 PF10646 Sporulation and spore germination NM058_07440 PF01725 Ham1 family NM058_07445 PF12850 Calcineurin-like phosphoesterase superfamily domain NM058_07455 PF09557 Domain of unknown function (DUF2382) NM058_07455 PF11181 Heat induced stress protein YflT NM058_07460 PF00583 Acetyltransferase (GNAT) family NM058_07475 PF01842 ACT domain NM058_07475 PF10369 Small subunit of acetolactate synthase NM058_07480 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NM058_07480 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NM058_07485 PF08502 LeuA allosteric (dimerisation) domain NM058_07485 PF00682 HMGL-like NM058_07490 PF00180 Isocitrate/isopropylmalate dehydrogenase NM058_07495 PF00330 Aconitase family (aconitate hydratase) NM058_07500 PF00694 Aconitase C-terminal domain NM058_07510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NM058_07510 PF05698 Bacterial trigger factor protein (TF) C-terminus NM058_07510 PF05697 Bacterial trigger factor protein (TF) NM058_07515 PF07724 AAA domain (Cdc48 subfamily) NM058_07515 PF10431 C-terminal, D2-small domain, of ClpB protein NM058_07515 PF06689 ClpX C4-type zinc finger NM058_07525 PF00004 ATPase family associated with various cellular activities (AAA) NM058_07525 PF02190 ATP-dependent protease La (LON) substrate-binding domain NM058_07525 PF05362 Lon protease (S16) C-terminal proteolytic domain NM058_07530 PF01926 50S ribosome-binding GTPase NM058_07540 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NM058_07540 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NM058_07540 PF01488 Shikimate / quinate 5-dehydrogenase NM058_07555 PF02602 Uroporphyrinogen-III synthase HemD NM058_07565 PF00202 Aminotransferase class-III NM058_07570 PF01476 LysM domain NM058_07585 PF08264 Anticodon-binding domain of tRNA NM058_07585 PF10458 Valyl tRNA synthetase tRNA binding arm NM058_07585 PF00133 tRNA synthetases class I (I, L, M and V) NM058_07600 PF05036 Sporulation related domain NM058_07605 PF02545 Maf-like protein NM058_07615 PF02796 Helix-turn-helix domain of resolvase NM058_07615 PF00239 Resolvase, N terminal domain NM058_07690 PF00145 C-5 cytosine-specific DNA methylase NM058_07785 PF01464 Transglycosylase SLT domain NM058_07795 PF13457 GW (Gly-Tryp) dipeptide domain NM058_07795 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NM058_07825 PF10960 BhlA holin family NM058_07830 PF04688 SPP1 phage holin NM058_07835 PF01471 Putative peptidoglycan binding domain NM058_07835 PF01476 LysM domain NM058_07835 PF01510 N-acetylmuramoyl-L-alanine amidase NM058_07850 PF18801 response regulator aspartate phosphatase H, N terminal NM058_07905 PF04093 rod shape-determining protein MreD NM058_07910 PF03775 Septum formation inhibitor MinC, C-terminal domain NM058_07915 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NM058_07920 PF01551 Peptidase family M23 NM058_07930 PF00829 Ribosomal prokaryotic L21 protein NM058_07935 PF04327 Cysteine protease Prp NM058_07940 PF01016 Ribosomal L27 protein NM058_07950 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NM058_07950 PF14682 Sporulation initiation phospho-transferase B, C-terminal NM058_07955 PF01926 50S ribosome-binding GTPase NM058_07955 PF01018 GTP1/OBG NM058_07955 PF09269 Domain of unknown function (DUF1967) NM058_07960 PF01842 ACT domain NM058_07965 PF01842 ACT domain NM058_07965 PF00800 Prephenate dehydratase NM058_07970 PF02829 3H domain NM058_07970 PF08279 HTH domain NM058_07975 PF00266 Aminotransferase class-V NM058_07985 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NM058_07985 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NM058_07990 PF02445 Quinolinate synthetase A protein NM058_08000 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NM058_08010 PF01235 Sodium:alanine symporter family NM058_08035 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NM058_08035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NM058_08040 PF07690 Major Facilitator Superfamily NM058_08050 PF07499 RuvA, C-terminal domain NM058_08050 PF01330 RuvA N terminal domain NM058_08055 PF05491 RuvB C-terminal winged helix domain NM058_08055 PF17864 RuvB AAA lid domain NM058_08055 PF05496 Holliday junction DNA helicase RuvB P-loop domain NM058_08060 PF11146 Protein of unknown function (DUF2905) NM058_08065 PF02547 Queuosine biosynthesis protein NM058_08075 PF02699 Preprotein translocase subunit NM058_08085 PF04239 Protein of unknown function (DUF421) NM058_08090 PF01943 Polysaccharide biosynthesis protein NM058_08090 PF14667 Polysaccharide biosynthesis C-terminal domain NM058_08095 PF13797 Post-transcriptional regulator NM058_08100 PF07549 SecD/SecF GG Motif NM058_08100 PF02355 Protein export membrane protein NM058_08105 PF02080 TrkA-C domain NM058_08110 PF06305 Lipopolysaccharide assembly protein A domain NM058_08120 PF00156 Phosphoribosyl transferase domain NM058_08125 PF13291 ACT domain NM058_08125 PF04607 Region found in RelA / SpoT proteins NM058_08125 PF02824 TGS domain NM058_08130 PF13291 ACT domain NM058_08130 PF02824 TGS domain NM058_08130 PF04607 Region found in RelA / SpoT proteins NM058_08135 PF02580 D-Tyr-tRNA(Tyr) deacylase NM058_08140 PF01520 N-acetylmuramoyl-L-alanine amidase NM058_08140 PF08239 Bacterial SH3 domain NM058_08145 PF17449 Uncharacterized YrzK-like NM058_08150 PF13393 Histidyl-tRNA synthetase NM058_08150 PF03129 Anticodon binding domain NM058_08165 PF00899 ThiF family NM058_08170 PF12002 MgsA AAA+ ATPase C terminal NM058_08170 PF05496 Holliday junction DNA helicase RuvB P-loop domain NM058_08170 PF16193 AAA C-terminal domain NM058_08175 PF02082 Transcriptional regulator NM058_08180 PF00266 Aminotransferase class-V NM058_08190 PF07719 Tetratricopeptide repeat NM058_08190 PF13181 Tetratricopeptide repeat NM058_08195 PF13538 UvrD-like helicase C-terminal domain NM058_08195 PF14490 Helix-hairpin-helix containing domain NM058_08195 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain NM058_08200 PF05239 PRC-barrel domain NM058_08210 PF13056 Protein of unknown function (DUF3918) NM058_08215 PF00528 Binding-protein-dependent transport system inner membrane component NM058_08220 PF00528 Binding-protein-dependent transport system inner membrane component NM058_08230 PF00005 ABC transporter NM058_08240 PF02272 DHHA1 domain NM058_08240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NM058_08240 PF01411 tRNA synthetases class II (A) NM058_08245 PF06135 IreB regulatory phosphoprotein NM058_08250 PF03652 Holliday junction resolvase NM058_08255 PF06949 Protein of unknown function (DUF1292) NM058_08260 PF02618 YceG-like family NM058_08265 PF01596 O-methyltransferase NM058_08270 PF01136 Peptidase family U32 NM058_08280 PF00485 Phosphoribulokinase / Uridine kinase family NM058_08285 PF01272 Transcription elongation factor, GreA/GreB, C-term NM058_08285 PF03449 Transcription elongation factor, N-terminal NM058_08295 PF07423 Domain of unknown function (DUF1510) NM058_08300 PF10750 Protein of unknown function (DUF2536) NM058_08305 PF13649 Methyltransferase domain NM058_08310 PF01048 Phosphorylase superfamily NM058_08315 PF00291 Pyridoxal-phosphate dependent enzyme NM058_08320 PF01053 Cys/Met metabolism PLP-dependent enzyme NM058_08330 PF07849 Protein of unknown function (DUF1641) NM058_08335 PF00037 4Fe-4S binding domain NM058_08335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NM058_08335 PF00384 Molybdopterin oxidoreductase NM058_08335 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NM058_08335 PF01568 Molydopterin dinucleotide binding domain NM058_08340 PF10057 Uncharacterized conserved protein (DUF2294) NM058_08345 PF01226 Formate/nitrite transporter NM058_08350 PF09501 Probable sporulation protein (Bac_small_yrzI) NM058_08360 PF08241 Methyltransferase domain NM058_08375 PF14145 YrhK-like protein NM058_08385 PF13739 Deacetylase PdaC NM058_08385 PF11738 Protein of unknown function (DUF3298) NM058_08390 PF08281 Sigma-70, region 4 NM058_08390 PF04542 Sigma-70 region 2 NM058_08400 PF01810 LysE type translocator NM058_08420 PF03610 PTS system fructose IIA component NM058_08430 PF03609 PTS system sorbose-specific iic component NM058_08435 PF03613 PTS system mannose/fructose/sorbose family IID component NM058_08445 PF00251 Glycosyl hydrolases family 32 N-terminal domain NM058_08445 PF08244 Glycosyl hydrolases family 32 C terminal NM058_08460 PF03079 ARD/ARD' family NM058_08470 PF13411 MerR HTH family regulatory protein NM058_08475 PF13411 MerR HTH family regulatory protein NM058_08480 PF06719 AraC-type transcriptional regulator N-terminus NM058_08480 PF12833 Helix-turn-helix domain NM058_08485 PF00248 Aldo/keto reductase family NM058_08490 PF00381 PTS HPr component phosphorylation site NM058_08495 PF07875 Coat F domain NM058_08510 PF07875 Coat F domain NM058_08530 PF12464 Maltose acetyltransferase NM058_08530 PF14602 Hexapeptide repeat of succinyl-transferase NM058_08535 PF00892 EamA-like transporter family NM058_08540 PF00561 alpha/beta hydrolase fold NM058_08550 PF01374 Glycosyl hydrolase family 46 NM058_08555 PF00248 Aldo/keto reductase family NM058_08560 PF08281 Sigma-70, region 4 NM058_08560 PF04542 Sigma-70 region 2 NM058_08565 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment NM058_08575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NM058_08575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NM058_08575 PF02824 TGS domain NM058_08575 PF03129 Anticodon binding domain NM058_08580 PF00005 ABC transporter NM058_08580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NM058_08585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NM058_08585 PF00005 ABC transporter NM058_08590 PF00528 Binding-protein-dependent transport system inner membrane component NM058_08595 PF00528 Binding-protein-dependent transport system inner membrane component NM058_08600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NM058_08610 PF10823 Protein of unknown function (DUF2568) NM058_08630 PF00392 Bacterial regulatory proteins, gntR family NM058_08630 PF00155 Aminotransferase class I and II NM058_08635 PF07690 Major Facilitator Superfamily NM058_08640 PF00583 Acetyltransferase (GNAT) family NM058_08645 PF05163 DinB family NM058_08650 PF07729 FCD domain NM058_08650 PF00392 Bacterial regulatory proteins, gntR family NM058_08655 PF13536 Putative multidrug resistance efflux transporter NM058_08660 PF12833 Helix-turn-helix domain NM058_08660 PF02311 AraC-like ligand binding domain NM058_08670 PF02156 Glycosyl hydrolase family 26 NM058_08675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NM058_08675 PF03466 LysR substrate binding domain NM058_08680 PF00892 EamA-like transporter family NM058_08685 PF14142 YrzO-like protein NM058_08690 PF03466 LysR substrate binding domain NM058_08690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NM058_08725 PF05105 Bacteriophage holin family NM058_08730 PF01510 N-acetylmuramoyl-L-alanine amidase NM058_08730 PF01471 Putative peptidoglycan binding domain NM058_08740 PF01337 Barstar (barnase inhibitor) NM058_08745 PF18593 CdiI immunity protein NM058_08760 PF04740 LXG domain of WXG superfamily NM058_08770 PF18801 response regulator aspartate phosphatase H, N terminal NM058_08770 PF13176 Tetratricopeptide repeat NM058_08790 PF00881 Nitroreductase family NM058_08795 PF01638 HxlR-like helix-turn-helix NM058_08805 PF00440 Bacterial regulatory proteins, tetR family NM058_08810 PF00106 short chain dehydrogenase NM058_08835 PF02583 Metal-sensitive transcriptional repressor NM058_08850 PF01206 Sulfurtransferase TusA NM058_08850 PF00581 Rhodanese-like domain NM058_08865 PF01206 Sulfurtransferase TusA NM058_08870 PF01925 Sulfite exporter TauE/SafE NM058_08875 PF00296 Luciferase-like monooxygenase NM058_08880 PF01037 Lrp/AsnC ligand binding domain NM058_08885 PF01037 Lrp/AsnC ligand binding domain NM058_08890 PF00857 Isochorismatase family NM058_08895 PF12706 Beta-lactamase superfamily domain NM058_08900 PF00083 Sugar (and other) transporter NM058_08900 PF07690 Major Facilitator Superfamily NM058_08905 PF07690 Major Facilitator Superfamily NM058_08940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NM058_08940 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NM058_08945 PF09335 SNARE associated Golgi protein NM058_08950 PF01510 N-acetylmuramoyl-L-alanine amidase NM058_08950 PF01471 Putative peptidoglycan binding domain NM058_08955 PF00657 GDSL-like Lipase/Acylhydrolase NM058_08960 PF08970 Sporulation inhibitor A NM058_08970 PF01926 50S ribosome-binding GTPase NM058_08975 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NM058_08975 PF08501 Shikimate dehydrogenase substrate binding domain NM058_08975 PF01488 Shikimate / quinate 5-dehydrogenase NM058_08980 PF01985 CRS1 / YhbY (CRM) domain NM058_08985 PF01467 Cytidylyltransferase-like NM058_08990 PF01966 HD domain NM058_09000 PF13649 Methyltransferase domain NM058_09010 PF10531 SLBB domain NM058_09015 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NM058_09025 PF14141 YqzM-like protein NM058_09035 PF06144 DNA polymerase III, delta subunit NM058_09040 PF01649 Ribosomal protein S20 NM058_09050 PF07454 Stage II sporulation protein P (SpoIIP) NM058_09055 PF12438 Protein of unknown function (DUF3679) NM058_09060 PF00679 Elongation factor G C-terminus NM058_09060 PF00009 Elongation factor Tu GTP binding domain NM058_09060 PF03144 Elongation factor Tu domain 2 NM058_09060 PF06421 GTP-binding protein LepA C-terminus NM058_09070 PF01628 HrcA protein C terminal domain NM058_09080 PF00012 Hsp70 protein NM058_09095 PF04452 RNA methyltransferase NM058_09100 PF01938 TRAM domain NM058_09100 PF00919 Uncharacterized protein family UPF0004 NM058_09100 PF04055 Radical SAM superfamily NM058_09105 PF02690 Na+/Pi-cotransporter NM058_09110 PF01165 Ribosomal protein S21 NM058_09115 PF09424 Yqey-like protein NM058_09120 PF01957 NfeD-like C-terminal, partner-binding NM058_09120 PF01972 Serine dehydrogenase proteinase NM058_09125 PF12127 SigmaW regulon antibacterial NM058_09135 PF07873 YabP family NM058_09145 PF02562 PhoH-like protein NM058_09155 PF02130 Uncharacterized protein family UPF0054 NM058_09160 PF01219 Prokaryotic diacylglycerol kinase NM058_09165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NM058_09170 PF01926 50S ribosome-binding GTPase NM058_09170 PF07650 KH domain NM058_09175 PF14006 YqzL-like protein NM058_09180 PF02565 Recombination protein O C terminal NM058_09180 PF11967 Recombination protein O N terminal NM058_09185 PF02091 Glycyl-tRNA synthetase alpha subunit NM058_09195 PF00571 CBS domain NM058_09195 PF08279 HTH domain NM058_09200 PF03618 Kinase/pyrophosphorylase NM058_09205 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NM058_09210 PF01807 CHC2 zinc finger NM058_09210 PF10410 DnaB-helicase binding domain of primase NM058_09210 PF08275 DNA primase catalytic core, N-terminal domain NM058_09215 PF00140 Sigma-70 factor, region 1.2 NM058_09215 PF03979 Sigma-70 factor, region 1.1 NM058_09215 PF04542 Sigma-70 region 2 NM058_09215 PF04539 Sigma-70 region 3 NM058_09215 PF04545 Sigma-70, region 4 NM058_09220 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NM058_09225 PF04816 tRNA (adenine(22)-N(1))-methyltransferase NM058_09230 PF01784 NIF3 (NGG1p interacting factor 3) NM058_09235 PF02401 LytB protein NM058_09240 PF14181 YqfQ-like protein NM058_09245 PF00270 DEAD/DEAH box helicase NM058_09245 PF00271 Helicase conserved C-terminal domain NM058_09250 PF01261 Xylose isomerase-like TIM barrel NM058_09255 PF11116 Protein of unknown function (DUF2624) NM058_09265 PF01475 Ferric uptake regulator family NM058_09290 PF06691 Protein of unknown function (DUF1189) NM058_09295 PF04306 Protein of unknown function (DUF456) NM058_09310 PF00905 Penicillin binding protein transpeptidase domain NM058_09310 PF03717 Penicillin-binding Protein dimerisation domain NM058_09315 PF12849 PBP superfamily domain NM058_09320 PF00528 Binding-protein-dependent transport system inner membrane component NM058_09325 PF00528 Binding-protein-dependent transport system inner membrane component NM058_09330 PF00005 ABC transporter NM058_09360 PF00471 Ribosomal protein L33 NM058_09365 PF01812 5-formyltetrahydrofolate cyclo-ligase family NM058_09385 PF00480 ROK family NM058_09395 PF00246 Zinc carboxypeptidase NM058_09405 PF01910 Thiamine-binding protein NM058_09410 PF10958 Protein of unknown function (DUF2759) NM058_09415 PF00753 Metallo-beta-lactamase superfamily NM058_09420 PF11117 Protein of unknown function (DUF2626) NM058_09425 PF03960 ArsC family NM058_09435 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain NM058_09435 PF01740 STAS domain NM058_09445 PF01544 CorA-like Mg2+ transporter protein NM058_09450 PF00571 CBS domain NM058_09460 PF00437 Type II/IV secretion system protein NM058_09470 PF07963 Prokaryotic N-terminal methylation motif NM058_09475 PF07963 Prokaryotic N-terminal methylation motif NM058_09485 PF15980 Putative Competence protein ComGF NM058_09490 PF14173 ComG operon protein 7 NM058_09495 PF14038 YqzE-like protein NM058_09500 PF13028 Protein of unknown function (DUF3889) NM058_09515 PF12389 Camelysin metallo-endopeptidase NM058_09520 PF01381 Helix-turn-helix NM058_09520 PF08671 Anti-repressor SinI NM058_09525 PF08671 Anti-repressor SinI NM058_09530 PF11079 Bacterial protein YqhG of unknown function NM058_09535 PF00271 Helicase conserved C-terminal domain NM058_09535 PF00176 SNF2 family N-terminal domain NM058_09540 PF01571 Aminomethyltransferase folate-binding domain NM058_09540 PF08669 Glycine cleavage T-protein C-terminal barrel domain NM058_09545 PF02347 Glycine cleavage system P-protein NM058_09555 PF00581 Rhodanese-like domain NM058_09560 PF03099 Biotin/lipoate A/B protein ligase family NM058_09565 PF02742 Iron dependent repressor, metal binding and dimerisation domain NM058_09565 PF01325 Iron dependent repressor, N-terminal DNA binding domain NM058_09570 PF01734 Patatin-like phospholipase NM058_09585 PF11085 Conserved membrane protein YqhR NM058_09590 PF01220 Dehydroquinase class II NM058_09595 PF01321 Creatinase/Prolidase N-terminal domain NM058_09595 PF00557 Metallopeptidase family M24 NM058_09600 PF01132 Elongation factor P (EF-P) OB domain NM058_09600 PF08207 Elongation factor P (EF-P) KOW-like domain NM058_09600 PF09285 Elongation factor P, C-terminal NM058_09605 PF10942 Protein of unknown function (DUF2619) NM058_09615 PF09548 Stage III sporulation protein AB (spore_III_AB) NM058_09620 PF06686 Stage III sporulation protein AC/AD protein family NM058_09635 PF09581 Stage III sporulation protein AF (Spore_III_AF) NM058_09645 PF12685 SpoIIIAH-like protein NM058_09655 PF02785 Biotin carboxylase C-terminal domain NM058_09655 PF00289 Biotin carboxylase, N-terminal domain NM058_09655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NM058_09660 PF03780 Asp23 family, cell envelope-related function NM058_09665 PF01029 NusB family NM058_09670 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NM058_09670 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NM058_09680 PF02609 Exonuclease VII small subunit NM058_09685 PF00348 Polyprenyl synthetase NM058_09700 PF02863 Arginine repressor, C-terminal domain NM058_09700 PF01316 Arginine repressor, DNA binding domain NM058_09705 PF13476 AAA domain NM058_09710 PF05580 SpoIVB peptidase S55 NM058_09710 PF17820 PDZ domain NM058_09715 PF08769 Sporulation initiation factor Spo0A C terminal NM058_09715 PF00072 Response regulator receiver domain NM058_09725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NM058_09740 PF01520 N-acetylmuramoyl-L-alanine amidase NM058_09745 PF03009 Glycerophosphoryl diester phosphodiesterase family NM058_09755 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NM058_09755 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NM058_09780 PF11118 Protein of unknown function (DUF2627) NM058_09785 PF02954 Bacterial regulatory protein, Fis family NM058_09785 PF00989 PAS fold NM058_09785 PF00158 Sigma-54 interaction domain NM058_09795 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NM058_09795 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NM058_09805 PF07992 Pyridine nucleotide-disulphide oxidoreductase NM058_09805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NM058_09810 PF00676 Dehydrogenase E1 component NM058_09815 PF02779 Transketolase, pyrimidine binding domain NM058_09815 PF02780 Transketolase, C-terminal domain NM058_09820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NM058_09820 PF00364 Biotin-requiring enzyme NM058_09820 PF02817 e3 binding domain NM058_09825 PF06445 GyrI-like small molecule binding domain NM058_09825 PF13411 MerR HTH family regulatory protein NM058_09835 PF00781 Diacylglycerol kinase catalytic domain NM058_09840 PF06491 Disulphide isomerase NM058_09845 PF00497 Bacterial extracellular solute-binding proteins, family 3 NM058_09850 PF00528 Binding-protein-dependent transport system inner membrane component NM058_09855 PF00005 ABC transporter NM058_09860 PF11728 Putative aromatic acid exporter C-terminal domain NM058_09860 PF06081 Aromatic acid exporter family member 1 NM058_09865 PF03734 L,D-transpeptidase catalytic domain NM058_09880 PF01039 Carboxyl transferase domain NM058_09890 PF09844 Uncharacterized conserved protein (COG2071) NM058_09895 PF02096 60Kd inner membrane protein NM058_09905 PF00817 impB/mucB/samB family NM058_09905 PF11799 impB/mucB/samB family C-terminal domain NM058_09905 PF11798 IMS family HHH motif NM058_09910 PF00817 impB/mucB/samB family NM058_09910 PF11799 impB/mucB/samB family C-terminal domain NM058_09910 PF11798 IMS family HHH motif NM058_09915 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NM058_09915 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NM058_09925 PF12706 Beta-lactamase superfamily domain NM058_09930 PF00471 Ribosomal protein L33 NM058_09935 PF12146 Serine aminopeptidase, S33 NM058_09940 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NM058_09950 PF03807 NADP oxidoreductase coenzyme F420-dependent NM058_09950 PF14748 Pyrroline-5-carboxylate reductase dimerisation NM058_09960 PF00106 short chain dehydrogenase NM058_09970 PF00485 Phosphoribulokinase / Uridine kinase family NM058_09995 PF14164 YqzH-like protein NM058_10005 PF08863 YolD-like protein NM058_10010 PF00583 Acetyltransferase (GNAT) family NM058_10015 PF03992 Antibiotic biosynthesis monooxygenase NM058_10020 PF13673 Acetyltransferase (GNAT) domain NM058_10020 PF04229 GrpB protein NM058_10025 PF01521 Iron-sulphur cluster biosynthesis NM058_10030 PF10827 Protein of unknown function (DUF2552) NM058_10035 PF12146 Serine aminopeptidase, S33 NM058_10045 PF00248 Aldo/keto reductase family NM058_10050 PF13072 Mother cell inhibitor of FtsZ NM058_10055 PF00293 NUDIX domain NM058_10065 PF01381 Helix-turn-helix NM058_10070 PF00710 Asparaginase, N-terminal NM058_10070 PF17763 Glutaminase/Asparaginase C-terminal domain NM058_10080 PF03553 Na+/H+ antiporter family NM058_10085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NM058_10085 PF00390 Malic enzyme, N-terminal domain NM058_10085 PF03949 Malic enzyme, NAD binding domain NM058_10095 PF01944 Stage II sporulation protein M NM058_10100 PF01475 Ferric uptake regulator family NM058_10105 PF14004 Protein of unknown function (DUF4227) NM058_10110 PF02899 Phage integrase, N-terminal SAM-like domain NM058_10110 PF00589 Phage integrase family NM058_10115 PF01676 Metalloenzyme superfamily NM058_10120 PF01048 Phosphorylase superfamily NM058_10125 PF00768 D-alanyl-D-alanine carboxypeptidase NM058_10125 PF07943 Penicillin-binding protein 5, C-terminal domain NM058_10130 PF01740 STAS domain NM058_10135 PF13581 Histidine kinase-like ATPase domain NM058_10140 PF04542 Sigma-70 region 2 NM058_10140 PF04539 Sigma-70 region 3 NM058_10140 PF04545 Sigma-70, region 4 NM058_10145 PF12164 Stage V sporulation protein AA NM058_10150 PF13782 Stage V sporulation protein AB NM058_10155 PF03862 SpoVAC/SpoVAEB sporulation membrane protein NM058_10160 PF07451 Stage V sporulation protein AD (SpoVAD) NM058_10165 PF03862 SpoVAC/SpoVAEB sporulation membrane protein NM058_10175 PF03323 Bacillus/Clostridium GerA spore germination protein NM058_10185 PF06207 Protein of unknown function (DUF1002) NM058_10190 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NM058_10205 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) NM058_10210 PF10502 Signal peptidase, peptidase S26 NM058_10230 PF00677 Lumazine binding domain NM058_10235 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NM058_10235 PF00925 GTP cyclohydrolase II NM058_10240 PF00885 6,7-dimethyl-8-ribityllumazine synthase NM058_10245 PF00583 Acetyltransferase (GNAT) family NM058_10265 PF13047 Protein of unknown function (DUF3907) NM058_10275 PF07670 Nucleoside recognition NM058_10280 PF07670 Nucleoside recognition NM058_10290 PF00578 AhpC/TSA family NM058_10300 PF01578 Cytochrome C assembly protein NM058_10315 PF08281 Sigma-70, region 4 NM058_10315 PF04542 Sigma-70 region 2 NM058_10325 PF01487 Type I 3-dehydroquinase NM058_10330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NM058_10330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NM058_10330 PF01842 ACT domain NM058_10335 PF12822 ECF transporter, substrate-specific component NM058_10345 PF14493 Helix-turn-helix domain NM058_10365 PF10864 Protein of unknown function (DUF2663) NM058_10370 PF00149 Calcineurin-like phosphoesterase NM058_10380 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NM058_10380 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NM058_10390 PF13367 PrsW family intramembrane metalloprotease NM058_10395 PF07486 Cell Wall Hydrolase NM058_10395 PF01471 Putative peptidoglycan binding domain NM058_10400 PF14620 YpeB sporulation NM058_10400 PF03413 Peptidase propeptide and YPEB domain NM058_10405 PF12945 Flagellar protein YcgR NM058_10405 PF07238 PilZ domain NM058_10410 PF17313 Family of unknown function (DUF5359) NM058_10425 PF01070 FMN-dependent dehydrogenase NM058_10430 PF14140 YpzI-like protein NM058_10440 PF14045 YIEGIA protein NM058_10450 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NM058_10450 PF01926 50S ribosome-binding GTPase NM058_10460 PF10966 Protein of unknown function (DUF2768) NM058_10470 PF09547 Stage IV sporulation protein A (spore_IV_A) NM058_10475 PF00216 Bacterial DNA-binding protein NM058_10485 PF02081 Tryptophan RNA-binding attenuator protein NM058_10495 PF01209 ubiE/COQ5 methyltransferase family NM058_10500 PF00348 Polyprenyl synthetase NM058_10505 PF00334 Nucleoside diphosphate kinase NM058_10510 PF01739 CheR methyltransferase, SAM binding domain NM058_10510 PF03705 CheR methyltransferase, all-alpha domain NM058_10515 PF01264 Chorismate synthase NM058_10520 PF01761 3-dehydroquinate synthase NM058_10525 PF07736 Chorismate mutase type I NM058_10530 PF04715 Anthranilate synthase component I, N terminal region NM058_10530 PF00425 chorismate binding enzyme NM058_10535 PF02885 Glycosyl transferase family, helical bundle domain NM058_10535 PF00591 Glycosyl transferase family, a/b domain NM058_10540 PF00218 Indole-3-glycerol phosphate synthase NM058_10545 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NM058_10555 PF00290 Tryptophan synthase alpha chain NM058_10560 PF00155 Aminotransferase class I and II NM058_10580 PF08858 IDEAL domain NM058_10580 PF08864 UPF0302 domain NM058_10585 PF10673 Protein of unknown function (DUF2487) NM058_10595 PF00033 Cytochrome b/b6/petB NM058_10605 PF07187 Protein of unknown function (DUF1405) NM058_10615 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NM058_10615 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NM058_10620 PF03819 MazG nucleotide pyrophosphohydrolase domain NM058_10625 PF05173 Dihydrodipicolinate reductase, C-terminus NM058_10625 PF01113 Dihydrodipicolinate reductase, N-terminus NM058_10630 PF02142 MGS-like domain NM058_10655 PF02548 Ketopantoate hydroxymethyltransferase NM058_10660 PF02569 Pantoate-beta-alanine ligase NM058_10665 PF02261 Aspartate decarboxylase NM058_10675 PF14084 Protein of unknown function (DUF4264) NM058_10685 PF00155 Aminotransferase class I and II NM058_10690 PF00152 tRNA synthetases class II (D, K and N) NM058_10690 PF01336 OB-fold nucleic acid binding domain NM058_10695 PF07261 Replication initiation and membrane attachment NM058_10700 PF10576 Iron-sulfur binding domain of endonuclease III NM058_10700 PF00633 Helix-hairpin-helix motif NM058_10700 PF00730 HhH-GPD superfamily base excision DNA repair protein NM058_10710 PF00905 Penicillin binding protein transpeptidase domain NM058_10710 PF00912 Transglycosylase NM058_10730 PF17522 Family of unknown function (DUF5446) NM058_10735 PF08807 Bacterial domain of unknown function (DUF1798) NM058_10740 PF14178 YppF-like protein NM058_10755 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NM058_10765 PF13482 RNase_H superfamily NM058_10775 PF11122 Inner spore coat protein D NM058_10780 PF06908 YspA SLOG family NM058_10785 PF05103 DivIVA protein NM058_10795 PF01170 Putative RNA methylase family UPF0020 NM058_10795 PF02926 THUMP domain NM058_10800 PF14139 YpzG-like protein NM058_10810 PF13307 Helicase C-terminal domain NM058_10820 PF04962 KduI/IolB family NM058_10825 PF00356 Bacterial regulatory proteins, lacI family NM058_10830 PF00294 pfkB family carbohydrate kinase NM058_10835 PF01081 KDPG and KHG aldolase NM058_10840 PF03812 2-keto-3-deoxygluconate permease NM058_10845 PF02074 Carboxypeptidase Taq (M32) metallopeptidase NM058_10850 PF00156 Phosphoribosyl transferase domain NM058_10860 PF02797 Chalcone and stilbene synthases, C-terminal domain NM058_10860 PF00195 Chalcone and stilbene synthases, N-terminal domain NM058_10865 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family NM058_10880 PF10752 Protein of unknown function (DUF2533) NM058_10890 PF01367 5'-3' exonuclease, C-terminal SAM fold NM058_10890 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NM058_10900 PF13456 Reverse transcriptase-like NM058_10910 PF13456 Reverse transcriptase-like NM058_10915 PF10782 Zinc-finger NM058_10920 PF10819 Protein of unknown function (DUF2564) NM058_10930 PF00313 'Cold-shock' DNA-binding domain NM058_10940 PF00534 Glycosyl transferases group 1 NM058_10940 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase NM058_10945 PF04204 Homoserine O-succinyltransferase NM058_10950 PF00255 Glutathione peroxidase NM058_10960 PF13769 Virulence factor NM058_10960 PF08712 Scaffold protein Nfu/NifU N terminal NM058_10965 PF00920 Dehydratase family NM058_10970 PF06491 Disulphide isomerase NM058_10975 PF04445 Putative SAM-dependent methyltransferase NM058_10980 PF14005 YpjP-like protein NM058_10985 PF04608 Phosphatidylglycerophosphatase A NM058_10995 PF00186 Dihydrofolate reductase NM058_11005 PF03006 Haemolysin-III related NM058_11010 PF08461 Ribonuclease R winged-helix domain NM058_11010 PF00158 Sigma-54 interaction domain NM058_11015 PF00291 Pyridoxal-phosphate dependent enzyme NM058_11015 PF00585 C-terminal regulatory domain of Threonine dehydratase NM058_11020 PF10751 Protein of unknown function (DUF2535) NM058_11025 PF02630 SCO1/SenC NM058_11030 PF13472 GDSL-like Lipase/Acylhydrolase family NM058_11035 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) NM058_11040 PF17431 Uncharacterized YmpT-like NM058_11050 PF01047 MarR family NM058_11055 PF01625 Peptide methionine sulfoxide reductase NM058_11060 PF01641 SelR domain NM058_11065 PF01168 Alanine racemase, N-terminal domain NM058_11065 PF00842 Alanine racemase, C-terminal domain NM058_11070 PF02333 Phytase NM058_11075 PF12996 DUF based on E. rectale Gene description (DUF3880) NM058_11120 PF01546 Peptidase family M20/M25/M40 NM058_11120 PF07687 Peptidase dimerisation domain NM058_11125 PF00583 Acetyltransferase (GNAT) family NM058_11135 PF14122 YokU-like protein, putative antitoxin NM058_11140 PF06855 YozE SAM-like fold NM058_11155 PF14162 YozD-like protein NM058_11160 PF01569 PAP2 superfamily NM058_11165 PF14191 YodL-like NM058_11175 PF01048 Phosphorylase superfamily NM058_11180 PF02557 D-alanyl-D-alanine carboxypeptidase NM058_11195 PF17820 PDZ domain NM058_11195 PF03572 Peptidase family S41 NM058_11195 PF01471 Putative peptidoglycan binding domain NM058_11200 PF00474 Sodium:solute symporter family NM058_11205 PF11755 Protein of unknown function (DUF3311) NM058_11210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NM058_11225 PF01638 HxlR-like helix-turn-helix NM058_11235 PF14552 Tautomerase enzyme NM058_11265 PF08830 Protein of unknown function (DUF1806) NM058_11270 PF02585 GlcNAc-PI de-N-acetylase NM058_11275 PF01740 STAS domain NM058_11285 PF02457 DisA bacterial checkpoint controller nucleotide-binding NM058_11285 PF10372 Bacterial membrane-spanning protein N-terminus NM058_11290 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NM058_11295 PF00877 NlpC/P60 family NM058_11295 PF01476 LysM domain NM058_11300 PF13627 Prokaryotic lipoprotein-attachment site NM058_11300 PF00080 Copper/zinc superoxide dismutase (SODC) NM058_11305 PF07728 AAA domain (dynein-related subfamily) NM058_11315 PF02779 Transketolase, pyrimidine binding domain NM058_11315 PF16870 2-oxoglutarate dehydrogenase C-terminal NM058_11315 PF00676 Dehydrogenase E1 component NM058_11325 PF01758 Sodium Bile acid symporter family NM058_11330 PF00209 Sodium:neurotransmitter symporter family NM058_11335 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NM058_11335 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NM058_11340 PF13249 Squalene-hopene cyclase N-terminal domain NM058_11340 PF13243 Squalene-hopene cyclase C-terminal domain NM058_11345 PF00171 Aldehyde dehydrogenase family NM058_11355 PF08000 Bacterial PH domain NM058_11360 PF01258 Prokaryotic dksA/traR C4-type zinc finger NM058_11365 PF02525 Flavodoxin-like fold NM058_11375 PF00270 DEAD/DEAH box helicase NM058_11375 PF00271 Helicase conserved C-terminal domain NM058_11375 PF00570 HRDC domain NM058_11375 PF16124 RecQ zinc-binding NM058_11375 PF09382 RQC domain NM058_11380 PF06725 3D domain NM058_11380 PF01476 LysM domain NM058_11385 PF00196 Bacterial regulatory proteins, luxR family NM058_11385 PF00072 Response regulator receiver domain NM058_11390 PF07730 Histidine kinase NM058_11395 PF00487 Fatty acid desaturase NM058_11400 PF17676 LD-carboxypeptidase C-terminal domain NM058_11400 PF02016 LD-carboxypeptidase N-terminal domain NM058_11415 PF04238 Protein of unknown function (DUF420) NM058_11425 PF01022 Bacterial regulatory protein, arsR family NM058_11435 PF08279 HTH domain NM058_11435 PF13280 WYL domain NM058_11440 PF06445 GyrI-like small molecule binding domain NM058_11445 PF00753 Metallo-beta-lactamase superfamily NM058_11450 PF13305 Tetracyclin repressor-like, C-terminal domain NM058_11450 PF00440 Bacterial regulatory proteins, tetR family NM058_11455 PF00583 Acetyltransferase (GNAT) family NM058_11460 PF12833 Helix-turn-helix domain NM058_11460 PF07883 Cupin domain NM058_11465 PF01588 Putative tRNA binding domain NM058_11480 PF12704 MacB-like periplasmic core domain NM058_11480 PF02687 FtsX-like permease family NM058_11480 PF00005 ABC transporter NM058_11490 PF00082 Subtilase family NM058_11500 PF00082 Subtilase family NM058_11575 PF08863 YolD-like protein NM058_11580 PF11798 IMS family HHH motif NM058_11580 PF00817 impB/mucB/samB family NM058_11580 PF11799 impB/mucB/samB family C-terminal domain NM058_11585 PF06713 Bacterial PH domain NM058_11600 PF00085 Thioredoxin NM058_11605 PF00535 Glycosyl transferase family 2 NM058_11635 PF17094 Uncharacterised protein family (UPF0715) NM058_11645 PF13443 Cro/C1-type HTH DNA-binding domain NM058_11665 PF17094 Uncharacterised protein family (UPF0715) NM058_11720 PF00457 Glycosyl hydrolases family 11 NM058_11730 PF01593 Flavin containing amine oxidoreductase NM058_11735 PF09346 SMI1 / KNR4 family (SUKH-1) NM058_11755 PF00391 PEP-utilising enzyme, mobile domain NM058_11755 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NM058_11760 PF13302 Acetyltransferase (GNAT) domain NM058_11765 PF18416 N-acetylglucosamine binding protein domain 2 NM058_11765 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NM058_11780 PF01965 DJ-1/PfpI family NM058_11795 PF00892 EamA-like transporter family NM058_11805 PF05675 Protein of unknown function (DUF817) NM058_11815 PF11188 Protein of unknown function (DUF2975) NM058_11845 PF18801 response regulator aspartate phosphatase H, N terminal NM058_11850 PF16302 Domain of unknown function (DUF4944) NM058_11855 PF00190 Cupin NM058_11865 PF02586 SOS response associated peptidase (SRAP) NM058_11885 PF00544 Pectate lyase NM058_11890 PF06912 Protein of unknown function (DUF1275) NM058_11895 PF03330 Lytic transglycolase NM058_11900 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal NM058_11900 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal NM058_11905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NM058_11905 PF00672 HAMP domain NM058_11905 PF05227 CHASE3 domain NM058_11910 PF13217 Protein of unknown function (DUF4025) NM058_11925 PF01261 Xylose isomerase-like TIM barrel NM058_11945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NM058_11945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NM058_11960 PF13302 Acetyltransferase (GNAT) domain NM058_11970 PF06103 Bacterial protein of unknown function (DUF948) NM058_11980 PF02334 Replication terminator protein NM058_11985 PF03807 NADP oxidoreductase coenzyme F420-dependent NM058_11985 PF14748 Pyrroline-5-carboxylate reductase dimerisation NM058_11990 PF01472 PUA domain NM058_11990 PF00696 Amino acid kinase family NM058_11995 PF03466 LysR substrate binding domain NM058_11995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NM058_12000 PF00310 Glutamine amidotransferases class-II NM058_12000 PF01493 GXGXG motif NM058_12000 PF04898 Glutamate synthase central domain NM058_12000 PF01645 Conserved region in glutamate synthase NM058_12005 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NM058_12005 PF07992 Pyridine nucleotide-disulphide oxidoreductase NM058_12015 PF03466 LysR substrate binding domain NM058_12015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NM058_12025 PF12728 Helix-turn-helix domain NM058_12030 PF00589 Phage integrase family NM058_12040 PF16800 IseA DL-endopeptidase inhibitor NM058_12045 PF01554 MatE NM058_12050 PF01263 Aldose 1-epimerase NM058_12075 PF00501 AMP-binding enzyme NM058_12075 PF13193 AMP-binding enzyme C-terminal domain NM058_12075 PF00668 Condensation domain NM058_12075 PF00550 Phosphopantetheine attachment site NM058_12080 PF00550 Phosphopantetheine attachment site NM058_12080 PF00668 Condensation domain NM058_12080 PF13193 AMP-binding enzyme C-terminal domain NM058_12080 PF00501 AMP-binding enzyme NM058_12090 PF00975 Thioesterase domain NM058_12090 PF13193 AMP-binding enzyme C-terminal domain NM058_12090 PF00501 AMP-binding enzyme NM058_12090 PF00668 Condensation domain NM058_12090 PF00550 Phosphopantetheine attachment site NM058_12095 PF07098 Protein of unknown function (DUF1360) NM058_12100 PF02638 Glycosyl hydrolase-like 10 NM058_12110 PF08360 QacR-like protein, C-terminal region NM058_12110 PF00440 Bacterial regulatory proteins, tetR family NM058_12115 PF17329 Family of unknown function (DUF5367) NM058_12120 PF02770 Acyl-CoA dehydrogenase, middle domain NM058_12120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NM058_12120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NM058_12135 PF00364 Biotin-requiring enzyme NM058_12140 PF00682 HMGL-like NM058_12150 PF01039 Carboxyl transferase domain NM058_12160 PF09335 SNARE associated Golgi protein NM058_12170 PF04138 GtrA-like protein NM058_12205 PF17189 Glycosyl hydrolase family 30 beta sandwich domain NM058_12210 PF17452 Uncharacterized YnfE-like NM058_12215 PF00942 Cellulose binding domain NM058_12215 PF00150 Cellulase (glycosyl hydrolase family 5) NM058_12220 PF01235 Sodium:alanine symporter family NM058_12235 PF00986 DNA gyrase B subunit, carboxyl terminus NM058_12235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_12235 PF00204 DNA gyrase B NM058_12235 PF01751 Toprim domain NM058_12240 PF13380 CoA binding domain NM058_12245 PF02660 Glycerol-3-phosphate acyltransferase NM058_12250 PF01521 Iron-sulphur cluster biosynthesis NM058_12260 PF03061 Thioesterase superfamily NM058_12275 PF13040 Fur-regulated basic protein B NM058_12280 PF00578 AhpC/TSA family NM058_12285 PF00330 Aconitase family (aconitate hydratase) NM058_12285 PF00694 Aconitase C-terminal domain NM058_12295 PF08179 Small acid-soluble spore protein P family NM058_12305 PF11084 Protein of unknown function (DUF2621) NM058_12310 PF07301 Protein of unknown function (DUF1453) NM058_12320 PF02683 Cytochrome C biogenesis protein transmembrane region NM058_12330 PF03672 Uncharacterised protein family (UPF0154) NM058_12335 PF10747 Sporulation inhibitor of replication protein SirA NM058_12340 PF00456 Transketolase, thiamine diphosphate binding domain NM058_12340 PF02780 Transketolase, C-terminal domain NM058_12340 PF02779 Transketolase, pyrimidine binding domain NM058_12345 PF05979 Bacterial protein of unknown function (DUF896) NM058_12350 PF00239 Resolvase, N terminal domain NM058_12355 PF01476 LysM domain NM058_12360 PF00717 Peptidase S24-like NM058_12360 PF01726 LexA DNA binding domain NM058_12370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NM058_12380 PF05908 Poly-gamma-glutamate hydrolase NM058_12390 PF14158 YndJ-like protein NM058_12410 PF03845 Spore germination protein NM058_12415 PF03323 Bacillus/Clostridium GerA spore germination protein NM058_12420 PF02417 Chromate transporter NM058_12430 PF08327 Activator of Hsp90 ATPase homolog 1-like protein NM058_12440 PF02416 mttA/Hcf106 family NM058_12450 PF14037 YoqO-like protein NM058_12455 PF15493 Domain of unknown function, YrpD NM058_12470 PF00303 Thymidylate synthase NM058_12490 PF00692 dUTPase NM058_12495 PF10903 Protein of unknown function (DUF2691) NM058_12500 PF00083 Sugar (and other) transporter NM058_12505 PF00565 Staphylococcal nuclease homologue NM058_12510 PF00457 Glycosyl hydrolases family 11 NM058_12515 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NM058_12515 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NM058_12520 PF01261 Xylose isomerase-like TIM barrel NM058_12525 PF00480 ROK family NM058_12550 PF00302 Chloramphenicol acetyltransferase NM058_12605 PF01638 HxlR-like helix-turn-helix NM058_12610 PF02525 Flavodoxin-like fold NM058_12645 PF03951 Glutamine synthetase, beta-Grasp domain NM058_12645 PF00120 Glutamine synthetase, catalytic domain NM058_12650 PF13411 MerR HTH family regulatory protein NM058_12660 PF13167 GTP-binding GTPase N-terminal NM058_12660 PF01926 50S ribosome-binding GTPase NM058_12660 PF16360 GTP-binding GTPase Middle Region NM058_12665 PF17866 AAA lid domain NM058_12665 PF00004 ATPase family associated with various cellular activities (AAA) NM058_12670 PF01520 N-acetylmuramoyl-L-alanine amidase NM058_12670 PF05036 Sporulation related domain NM058_12680 PF00268 Ribonucleotide reductase, small chain NM058_12685 PF02867 Ribonucleotide reductase, barrel domain NM058_12685 PF00317 Ribonucleotide reductase, all-alpha domain NM058_12685 PF08343 Ribonucleotide reductase N-terminal NM058_12690 PF07972 NrdI Flavodoxin like NM058_12700 PF14157 YmzC-like protein NM058_12705 PF17209 Hfq protein NM058_12715 PF12788 YmaF family NM058_12725 PF00893 Small Multidrug Resistance protein NM058_12730 PF00893 Small Multidrug Resistance protein NM058_12735 PF02566 OsmC-like protein NM058_12740 PF05908 Poly-gamma-glutamate hydrolase NM058_12765 PF13977 BetI-type transcriptional repressor, C-terminal NM058_12765 PF00440 Bacterial regulatory proteins, tetR family NM058_12805 PF02899 Phage integrase, N-terminal SAM-like domain NM058_12805 PF00589 Phage integrase family NM058_12810 PF01119 DNA mismatch repair protein, C-terminal domain NM058_12810 PF08676 MutL C terminal dimerisation domain NM058_12820 PF10628 Outer spore coat protein E (CotE) NM058_12825 PF06133 Control of competence regulator ComK, YlbF/YmcA NM058_12830 PF04055 Radical SAM superfamily NM058_12830 PF01938 TRAM domain NM058_12830 PF00919 Uncharacterized protein family UPF0004 NM058_12835 PF00155 Aminotransferase class I and II NM058_12840 PF08240 Alcohol dehydrogenase GroES-like domain NM058_12840 PF00107 Zinc-binding dehydrogenase NM058_12845 PF04232 Stage V sporulation protein S (SpoVS) NM058_12855 PF01966 HD domain NM058_12855 PF00013 KH domain NM058_12855 PF12072 Domain of unknown function (DUF3552) NM058_12860 PF00144 Beta-lactamase NM058_12865 PF00154 recA bacterial DNA recombination protein NM058_12870 PF18146 Damage-inducible protein CinA KH domain NM058_12870 PF00994 Probable molybdopterin binding domain NM058_12870 PF02464 Competence-damaged protein NM058_12875 PF01066 CDP-alcohol phosphatidyltransferase NM058_12885 PF11868 Protein of unknown function (DUF3388) NM058_12890 PF11588 Protein of unknown function (DUF3243) NM058_12900 PF00675 Insulinase (Peptidase family M16) NM058_12900 PF05193 Peptidase M16 inactive domain NM058_12905 PF05193 Peptidase M16 inactive domain NM058_12910 PF07690 Major Facilitator Superfamily NM058_12915 PF07702 UTRA domain NM058_12915 PF00392 Bacterial regulatory proteins, gntR family NM058_12920 PF17854 FtsK alpha domain NM058_12920 PF09397 Ftsk gamma domain NM058_12920 PF01580 FtsK/SpoIIIE family NM058_12925 PF14035 YlzJ-like protein NM058_12930 PF00574 Clp protease NM058_12935 PF00753 Metallo-beta-lactamase superfamily NM058_12935 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NM058_12935 PF17770 Ribonuclease J C-terminal domain NM058_12950 PF01118 Semialdehyde dehydrogenase, NAD binding domain NM058_12950 PF02774 Semialdehyde dehydrogenase, dimerisation domain NM058_12955 PF02441 Flavoprotein NM058_12960 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NM058_12960 PF16924 Dipicolinate synthase subunit A N-terminal domain NM058_12965 PF05239 PRC-barrel domain NM058_12970 PF00675 Insulinase (Peptidase family M16) NM058_12970 PF05193 Peptidase M16 inactive domain NM058_12980 PF00575 S1 RNA binding domain NM058_12980 PF03725 3' exoribonuclease family, domain 2 NM058_12980 PF01138 3' exoribonuclease family, domain 1 NM058_12980 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NM058_12980 PF00013 KH domain NM058_12985 PF00312 Ribosomal protein S15 NM058_12990 PF06574 FAD synthetase NM058_12990 PF01687 Riboflavin kinase NM058_12995 PF16198 tRNA pseudouridylate synthase B C-terminal domain NM058_12995 PF01509 TruB family pseudouridylate synthase (N terminal domain) NM058_13000 PF02033 Ribosome-binding factor A NM058_13005 PF04456 Protein of unknown function (DUF503) NM058_13015 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family NM058_13030 PF02576 RimP N-terminal domain NM058_13030 PF17384 RimP C-terminal SH3 domain NM058_13035 PF14579 Helix-hairpin-helix motif NM058_13035 PF00929 Exonuclease NM058_13035 PF02811 PHP domain NM058_13035 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NM058_13035 PF11490 DNA polymerase III polC-type N-terminus II NM058_13035 PF07733 Bacterial DNA polymerase III alpha NTPase domain NM058_13035 PF14480 DNA polymerase III polC-type N-terminus I NM058_13040 PF03129 Anticodon binding domain NM058_13040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NM058_13040 PF04073 Aminoacyl-tRNA editing domain NM058_13045 PF17820 PDZ domain NM058_13045 PF02163 Peptidase family M50 NM058_13060 PF01255 Putative undecaprenyl diphosphate synthase NM058_13065 PF01765 Ribosome recycling factor NM058_13070 PF00696 Amino acid kinase family NM058_13080 PF00318 Ribosomal protein S2 NM058_13090 PF04542 Sigma-70 region 2 NM058_13090 PF04539 Sigma-70 region 3 NM058_13090 PF04545 Sigma-70, region 4 NM058_13095 PF03975 CheD chemotactic sensory transduction NM058_13100 PF04509 CheC-like family NM058_13105 PF01584 CheW-like domain NM058_13110 PF02895 Signal transducing histidine kinase, homodimeric domain NM058_13110 PF01584 CheW-like domain NM058_13110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_13110 PF01627 Hpt domain NM058_13110 PF07194 P2 response regulator binding domain NM058_13115 PF01339 CheB methylesterase NM058_13115 PF00072 Response regulator receiver domain NM058_13120 PF10609 NUBPL iron-transfer P-loop NTPase NM058_13125 PF00448 SRP54-type protein, GTPase domain NM058_13135 PF01312 FlhB HrpN YscU SpaS Family NM058_13140 PF01311 Bacterial export proteins, family 1 NM058_13145 PF01313 Bacterial export proteins, family 3 NM058_13150 PF00813 FliP family NM058_13155 PF04347 Flagellar biosynthesis protein, FliO NM058_13160 PF00072 Response regulator receiver domain NM058_13165 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NM058_13165 PF04509 CheC-like family NM058_13170 PF02154 Flagellar motor switch protein FliM NM058_13170 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NM058_13175 PF03748 Flagellar basal body-associated protein FliL NM058_13180 PF06289 Flagellar and Swarming motility proteins NM058_13185 PF00460 Flagella basal body rod protein NM058_13185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NM058_13190 PF03963 Flagellar hook capping protein - N-terminal region NM058_13195 PF02120 Flagellar hook-length control protein FliK NM058_13200 PF03448 MgtE intracellular N domain NM058_13205 PF02050 Flagellar FliJ protein NM058_13210 PF18269 T3SS EscN ATPase C-terminal domain NM058_13210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NM058_13210 PF02874 ATP synthase alpha/beta family, beta-barrel domain NM058_13215 PF02108 Flagellar assembly protein FliH NM058_13225 PF01514 Secretory protein of YscJ/FliF family NM058_13225 PF08345 Flagellar M-ring protein C-terminal NM058_13230 PF02049 Flagellar hook-basal body complex protein FliE NM058_13235 PF00460 Flagella basal body rod protein NM058_13235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NM058_13240 PF00460 Flagella basal body rod protein NM058_13245 PF06018 CodY GAF-like domain NM058_13245 PF08222 CodY helix-turn-helix domain NM058_13260 PF02899 Phage integrase, N-terminal SAM-like domain NM058_13260 PF00589 Phage integrase family NM058_13265 PF01134 Glucose inhibited division protein A NM058_13275 PF02481 DNA recombination-mediator protein A NM058_13280 PF02629 CoA binding domain NM058_13280 PF00549 CoA-ligase NM058_13290 PF01312 FlhB HrpN YscU SpaS Family NM058_13300 PF01351 Ribonuclease HII NM058_13305 PF01926 50S ribosome-binding GTPase NM058_13310 PF01245 Ribosomal protein L19 NM058_13315 PF01746 tRNA (Guanine-1)-methyltransferase NM058_13320 PF05239 PRC-barrel domain NM058_13320 PF01782 RimM N-terminal domain NM058_13325 PF11068 YlqD protein NM058_13335 PF00886 Ribosomal protein S16 NM058_13340 PF02881 SRP54-type protein, helical bundle domain NM058_13340 PF00448 SRP54-type protein, GTPase domain NM058_13340 PF02978 Signal peptide binding domain NM058_13345 PF04297 Putative helix-turn-helix protein, YlxM / p13 like NM058_13350 PF02369 Bacterial Ig-like domain (group 1) NM058_13355 PF00448 SRP54-type protein, GTPase domain NM058_13355 PF02881 SRP54-type protein, helical bundle domain NM058_13360 PF06470 SMC proteins Flexible Hinge Domain NM058_13360 PF02463 RecF/RecN/SMC N terminal domain NM058_13365 PF00035 Double-stranded RNA binding motif NM058_13365 PF14622 Ribonuclease-III-like NM058_13370 PF00550 Phosphopantetheine attachment site NM058_13380 PF00698 Acyl transferase domain NM058_13385 PF02504 Fatty acid synthesis protein NM058_13390 PF03061 Thioesterase superfamily NM058_13395 PF17191 RecG wedge domain NM058_13395 PF00270 DEAD/DEAH box helicase NM058_13395 PF00271 Helicase conserved C-terminal domain NM058_13400 PF03313 Serine dehydratase alpha chain NM058_13405 PF01842 ACT domain NM058_13405 PF03315 Serine dehydratase beta chain NM058_13410 PF13684 Dihydroxyacetone kinase family NM058_13410 PF02734 DAK2 domain NM058_13415 PF03780 Asp23 family, cell envelope-related function NM058_13420 PF00830 Ribosomal L28 family NM058_13425 PF08183 Stage V sporulation protein family NM058_13435 PF00834 Ribulose-phosphate 3 epimerase family NM058_13440 PF16745 RsgA N-terminal domain NM058_13440 PF03193 RsgA GTPase NM058_13460 PF01189 16S rRNA methyltransferase RsmB/F NM058_13460 PF01029 NusB family NM058_13470 PF01327 Polypeptide deformylase NM058_13475 PF00271 Helicase conserved C-terminal domain NM058_13475 PF17764 3′ DNA-binding domain (3′BD) NM058_13475 PF18074 Primosomal protein N C-terminal domain NM058_13475 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NM058_13475 PF04851 Type III restriction enzyme, res subunit NM058_13480 PF02441 Flavoprotein NM058_13480 PF04127 DNA / pantothenate metabolism flavoprotein NM058_13485 PF01192 RNA polymerase Rpb6 NM058_13490 PF00625 Guanylate kinase NM058_13495 PF04025 Domain of unknown function (DUF370) NM058_13505 PF00689 Cation transporting ATPase, C-terminus NM058_13505 PF00690 Cation transporter/ATPase, N-terminus NM058_13535 PF01747 ATP-sulfurylase NM058_13535 PF14306 PUA-like domain NM058_13540 PF01384 Phosphate transporter family NM058_13545 PF01507 Phosphoadenosine phosphosulfate reductase family NM058_13550 PF00156 Phosphoribosyl transferase domain NM058_13555 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NM058_13560 PF01180 Dihydroorotate dehydrogenase NM058_13570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NM058_13570 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NM058_13570 PF02142 MGS-like domain NM058_13575 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NM058_13575 PF00117 Glutamine amidotransferase class-I NM058_13590 PF00860 Permease family NM058_13595 PF00156 Phosphoribosyl transferase domain NM058_13600 PF00849 RNA pseudouridylate synthase NM058_13600 PF01479 S4 domain NM058_13615 PF08264 Anticodon-binding domain of tRNA NM058_13615 PF00133 tRNA synthetases class I (I, L, M and V) NM058_13620 PF05103 DivIVA protein NM058_13625 PF01479 S4 domain NM058_13625 PF17774 Putative RNA-binding domain in YlmH NM058_13630 PF02325 YGGT family NM058_13635 PF04472 Cell division protein SepF NM058_13640 PF01168 Alanine racemase, N-terminal domain NM058_13645 PF02578 Multi-copper polyphenol oxidoreductase laccase NM058_13650 PF05239 PRC-barrel domain NM058_13655 PF07687 Peptidase dimerisation domain NM058_13655 PF01546 Peptidase family M20/M25/M40 NM058_13660 PF00005 ABC transporter NM058_13665 PF04542 Sigma-70 region 2 NM058_13665 PF04539 Sigma-70 region 3 NM058_13665 PF04545 Sigma-70, region 4 NM058_13670 PF04542 Sigma-70 region 2 NM058_13670 PF04545 Sigma-70, region 4 NM058_13675 PF03419 Sporulation factor SpoIIGA NM058_13690 PF02491 SHS2 domain inserted in FTSA NM058_13695 PF06947 Protein of unknown function (DUF1290) NM058_13705 PF05949 Bacterial protein of unknown function (DUF881) NM058_13710 PF08478 POTRA domain, FtsQ-type NM058_13715 PF01565 FAD binding domain NM058_13715 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NM058_13740 PF01225 Mur ligase family, catalytic domain NM058_13740 PF02875 Mur ligase family, glutamate ligase domain NM058_13740 PF08245 Mur ligase middle domain NM058_13750 PF00905 Penicillin binding protein transpeptidase domain NM058_13750 PF03793 PASTA domain NM058_13750 PF03717 Penicillin-binding Protein dimerisation domain NM058_13760 PF01795 MraW methylase family NM058_13765 PF02381 MraZ protein, putative antitoxin-like NM058_13775 PF02558 Ketopantoate reductase PanE/ApbA NM058_13775 PF08546 Ketopantoate reductase PanE/ApbA C terminal NM058_13780 PF00583 Acetyltransferase (GNAT) family NM058_13790 PF01783 Ribosomal L32p protein family NM058_13805 PF05636 HIGH Nucleotidyl Transferase NM058_13810 PF05362 Lon protease (S16) C-terminal proteolytic domain NM058_13810 PF13180 PDZ domain NM058_13820 PF07670 Nucleoside recognition NM058_13825 PF01467 Cytidylyltransferase-like NM058_13835 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) NM058_13840 PF06133 Control of competence regulator ComK, YlbF/YmcA NM058_13845 PF14003 YlbE-like protein NM058_13850 PF14071 Putative coat protein NM058_13855 PF00188 Cysteine-rich secretory protein family NM058_13855 PF14504 CAP-associated N-terminal NM058_13860 PF00571 CBS domain NM058_13865 PF08868 YugN-like family NM058_13870 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) NM058_13875 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NM058_13880 PF00510 Cytochrome c oxidase subunit III NM058_13890 PF00034 Cytochrome c NM058_13890 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NM058_13890 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NM058_13895 PF01040 UbiA prenyltransferase family NM058_13905 PF00682 HMGL-like NM058_13905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NM058_13905 PF02436 Conserved carboxylase domain NM058_13905 PF00364 Biotin-requiring enzyme NM058_13905 PF02785 Biotin carboxylase C-terminal domain NM058_13905 PF00289 Biotin carboxylase, N-terminal domain NM058_13915 PF07408 Protein of unknown function (DUF1507) NM058_13920 PF04960 Glutaminase NM058_13935 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NM058_13940 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) NM058_13945 PF14036 YlaH-like protein NM058_13950 PF03144 Elongation factor Tu domain 2 NM058_13950 PF00679 Elongation factor G C-terminus NM058_13950 PF00009 Elongation factor Tu GTP binding domain NM058_13950 PF14492 Elongation Factor G, domain II NM058_13955 PF17259 Family of unknown function (DUF5325) NM058_13970 PF04542 Sigma-70 region 2 NM058_13970 PF08281 Sigma-70, region 4 NM058_13985 PF07504 Fungalysin/Thermolysin Propeptide Motif NM058_13985 PF01447 Thermolysin metallopeptidase, catalytic domain NM058_13985 PF02868 Thermolysin metallopeptidase, alpha-helical domain NM058_13985 PF03413 Peptidase propeptide and YPEB domain NM058_13990 PF02082 Transcriptional regulator NM058_13995 PF07859 alpha/beta hydrolase fold NM058_14010 PF00459 Inositol monophosphatase family NM058_14020 PF06335 Protein of unknown function (DUF1054) NM058_14025 PF05256 Uncharacterised protein family (UPF0223) NM058_14030 PF01276 Orn/Lys/Arg decarboxylase, major domain NM058_14030 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NM058_14040 PF13790 SR1 protein NM058_14050 PF07992 Pyridine nucleotide-disulphide oxidoreductase NM058_14050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NM058_14060 PF02779 Transketolase, pyrimidine binding domain NM058_14060 PF02780 Transketolase, C-terminal domain NM058_14065 PF00676 Dehydrogenase E1 component NM058_14070 PF10368 Putative cell-wall binding lipoprotein NM058_14080 PF01327 Polypeptide deformylase NM058_14090 PF07288 Protein of unknown function (DUF1447) NM058_14095 PF17770 Ribonuclease J C-terminal domain NM058_14095 PF00753 Metallo-beta-lactamase superfamily NM058_14095 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NM058_14100 PF13382 Adenine deaminase C-terminal domain NM058_14100 PF01979 Amidohydrolase family NM058_14105 PF02080 TrkA-C domain NM058_14105 PF02254 TrkA-N domain NM058_14110 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like NM058_14115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_14115 PF00512 His Kinase A (phospho-acceptor) domain NM058_14115 PF00989 PAS fold NM058_14120 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NM058_14120 PF18277 AbrB C-terminal domain NM058_14130 PF17447 Uncharacterized YkpC-like NM058_14140 PF02558 Ketopantoate reductase PanE/ApbA NM058_14140 PF08546 Ketopantoate reductase PanE/ApbA C terminal NM058_14145 PF00005 ABC transporter NM058_14145 PF12848 ABC transporter NM058_14155 PF10502 Signal peptidase, peptidase S26 NM058_14160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NM058_14160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NM058_14165 PF00294 pfkB family carbohydrate kinase NM058_14170 PF08220 DeoR-like helix-turn-helix domain NM058_14170 PF00455 DeoR C terminal sensor domain NM058_14175 PF12704 MacB-like periplasmic core domain NM058_14175 PF02687 FtsX-like permease family NM058_14180 PF00005 ABC transporter NM058_14185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NM058_14190 PF04893 Yip1 domain NM058_14195 PF00664 ABC transporter transmembrane region NM058_14195 PF00005 ABC transporter NM058_14200 PF00664 ABC transporter transmembrane region NM058_14200 PF00005 ABC transporter NM058_14205 PF02597 ThiS family NM058_14210 PF02391 MoaE protein NM058_14215 PF03205 Molybdopterin guanine dinucleotide synthesis protein B NM058_14220 PF00994 Probable molybdopterin binding domain NM058_14220 PF03454 MoeA C-terminal region (domain IV) NM058_14220 PF03453 MoeA N-terminal region (domain I and II) NM058_14230 PF12804 MobA-like NTP transferase domain NM058_14245 PF00578 AhpC/TSA family NM058_14250 PF10417 C-terminal domain of 1-Cys peroxiredoxin NM058_14250 PF00578 AhpC/TSA family NM058_14255 PF00924 Mechanosensitive ion channel NM058_14260 PF03698 Uncharacterised protein family (UPF0180) NM058_14270 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal NM058_14270 PF00132 Bacterial transferase hexapeptide (six repeats) NM058_14270 PF14602 Hexapeptide repeat of succinyl-transferase NM058_14275 PF00258 Flavodoxin NM058_14285 PF00258 Flavodoxin NM058_14290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NM058_14290 PF03466 LysR substrate binding domain NM058_14300 PF14156 Antirepressor AbbA NM058_14305 PF04308 Ribonuclease H-like NM058_14320 PF00563 EAL domain NM058_14320 PF10388 EAL-domain associated signalling protein domain NM058_14335 PF01476 LysM domain NM058_14335 PF03734 L,D-transpeptidase catalytic domain NM058_14345 PF14177 YkyB-like protein NM058_14350 PF00072 Response regulator receiver domain NM058_14350 PF01584 CheW-like domain NM058_14360 PF00155 Aminotransferase class I and II NM058_14365 PF00512 His Kinase A (phospho-acceptor) domain NM058_14365 PF08447 PAS fold NM058_14365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_14365 PF00989 PAS fold NM058_14375 PF00188 Cysteine-rich secretory protein family NM058_14385 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NM058_14385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NM058_14390 PF02743 Cache domain NM058_14390 PF00672 HAMP domain NM058_14390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NM058_14405 PF11132 Transcriptional regulator protein (SplA) NM058_14410 PF05524 PEP-utilising enzyme, N-terminal NM058_14410 PF00391 PEP-utilising enzyme, mobile domain NM058_14410 PF02896 PEP-utilising enzyme, TIM barrel domain NM058_14415 PF00381 PTS HPr component phosphorylation site NM058_14420 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NM058_14420 PF00367 phosphotransferase system, EIIB NM058_14420 PF02378 Phosphotransferase system, EIIC NM058_14430 PF00356 Bacterial regulatory proteins, lacI family NM058_14430 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NM058_14435 PF00557 Metallopeptidase family M24 NM058_14435 PF01321 Creatinase/Prolidase N-terminal domain NM058_14450 PF00578 AhpC/TSA family NM058_14455 PF01943 Polysaccharide biosynthesis protein NM058_14470 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) NM058_14475 PF11514 Protein of unknown function (DUF3219) NM058_14480 PF00704 Glycosyl hydrolases family 18 NM058_14485 PF01476 LysM domain NM058_14490 PF01476 LysM domain NM058_14495 PF14489 QueF-like protein NM058_14505 PF01242 6-pyruvoyl tetrahydropterin synthase NM058_14520 PF07724 AAA domain (Cdc48 subfamily) NM058_14520 PF17871 AAA lid domain NM058_14520 PF10431 C-terminal, D2-small domain, of ClpB protein NM058_14520 PF00004 ATPase family associated with various cellular activities (AAA) NM058_14525 PF01618 MotA/TolQ/ExbB proton channel family NM058_14535 PF01047 MarR family NM058_14540 PF02743 Cache domain NM058_14540 PF00512 His Kinase A (phospho-acceptor) domain NM058_14540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_14550 PF09388 Spo0E like sporulation regulatory protein NM058_14555 PF06803 Protein of unknown function (DUF1232) NM058_14560 PF03079 ARD/ARD' family NM058_14565 PF00596 Class II Aldolase and Adducin N-terminal domain NM058_14575 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain NM058_14575 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain NM058_14580 PF00155 Aminotransferase class I and II NM058_14585 PF00795 Carbon-nitrogen hydrolase NM058_14590 PF01636 Phosphotransferase enzyme family NM058_14595 PF01008 Initiation factor 2 subunit family NM058_14605 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NM058_14605 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NM058_14610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_14610 PF00512 His Kinase A (phospho-acceptor) domain NM058_14610 PF13188 PAS domain NM058_14610 PF13426 PAS domain NM058_14610 PF00989 PAS fold NM058_14615 PF01757 Acyltransferase family NM058_14630 PF02386 Cation transport protein NM058_14635 PF01435 Peptidase family M48 NM058_14645 PF00269 Small, acid-soluble spore proteins, alpha/beta type NM058_14655 PF04542 Sigma-70 region 2 NM058_14660 PF03741 Integral membrane protein TerC family NM058_14665 PF09335 SNARE associated Golgi protein NM058_14670 PF00563 EAL domain NM058_14670 PF00990 Diguanylate cyclase, GGDEF domain NM058_14670 PF03707 Bacterial signalling protein N terminal repeat NM058_14680 PF01068 ATP dependent DNA ligase domain NM058_14695 PF00149 Calcineurin-like phosphoesterase NM058_14710 PF01047 MarR family NM058_14725 PF13411 MerR HTH family regulatory protein NM058_14735 PF11132 Transcriptional regulator protein (SplA) NM058_14740 PF03413 Peptidase propeptide and YPEB domain NM058_14745 PF03413 Peptidase propeptide and YPEB domain NM058_14755 PF00072 Response regulator receiver domain NM058_14755 PF00486 Transcriptional regulatory protein, C terminal NM058_14760 PF07615 YKOF-related Family NM058_14765 PF09819 ABC-type cobalt transport system, permease component NM058_14780 PF01740 STAS domain NM058_14785 PF00082 Subtilase family NM058_14790 PF08267 Cobalamin-independent synthase, N-terminal domain NM058_14790 PF01717 Cobalamin-independent synthase, Catalytic domain NM058_14795 PF00300 Histidine phosphatase superfamily (branch 1) NM058_14800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NM058_14810 PF00535 Glycosyl transferase family 2 NM058_14810 PF13181 Tetratricopeptide repeat NM058_14815 PF02566 OsmC-like protein NM058_14825 PF02566 OsmC-like protein NM058_14830 PF00171 Aldehyde dehydrogenase family NM058_14835 PF00696 Amino acid kinase family NM058_14835 PF01472 PUA domain NM058_14845 PF00893 Small Multidrug Resistance protein NM058_14850 PF00893 Small Multidrug Resistance protein NM058_14855 PF13302 Acetyltransferase (GNAT) domain NM058_14860 PF12867 DinB superfamily NM058_14865 PF04239 Protein of unknown function (DUF421) NM058_14875 PF00042 Globin NM058_14875 PF00970 Oxidoreductase FAD-binding domain NM058_14875 PF00175 Oxidoreductase NAD-binding domain NM058_14880 PF03061 Thioesterase superfamily NM058_14890 PF10282 Lactonase, 7-bladed beta-propeller NM058_14915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NM058_14920 PF00005 ABC transporter NM058_14920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NM058_14925 PF12911 N-terminal TM domain of oligopeptide transport permease C NM058_14925 PF00528 Binding-protein-dependent transport system inner membrane component NM058_14930 PF00528 Binding-protein-dependent transport system inner membrane component NM058_14935 PF04951 D-aminopeptidase NM058_14945 PF13180 PDZ domain NM058_14950 PF00535 Glycosyl transferase family 2 NM058_14965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NM058_14975 PF01865 Protein of unknown function DUF47 NM058_14985 PF14171 Toxin SpoIISA, type II toxin-antitoxin system NM058_14990 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system NM058_15005 PF04688 SPP1 phage holin NM058_15010 PF10779 Haemolysin XhlA NM058_15020 PF09693 Phage uncharacterised protein (Phage_XkdX) NM058_15025 PF09636 XkdW protein NM058_15045 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) NM058_15050 PF04865 Baseplate J-like protein NM058_15055 PF10934 Protein of unknown function (DUF2634) NM058_15060 PF10844 Protein of unknown function (DUF2577) NM058_15075 PF01464 Transglycosylase SLT domain NM058_15085 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC NM058_15090 PF09393 Phage tail tube protein NM058_15110 PF04883 Bacteriophage HK97-gp10, putative tail-component NM058_15115 PF12206 Domain of unknown function (DUF3599) NM058_15120 PF11436 Protein of unknown function (DUF3199) NM058_15125 PF05065 Phage capsid family NM058_15130 PF14550 Putative phage serine protease XkdF NM058_15140 PF04466 Phage terminase large subunit NM058_15140 PF17288 Terminase RNAseH like domain NM058_15150 PF08281 Sigma-70, region 4 NM058_15155 PF17356 Phage-like element PBSX protein XtrA NM058_15170 PF01695 IstB-like ATP binding protein NM058_15185 PF01381 Helix-turn-helix NM058_15195 PF05067 Manganese containing catalase NM058_15200 PF05908 Poly-gamma-glutamate hydrolase NM058_15205 PF08000 Bacterial PH domain NM058_15210 PF01510 N-acetylmuramoyl-L-alanine amidase NM058_15210 PF01476 LysM domain NM058_15210 PF01471 Putative peptidoglycan binding domain NM058_15215 PF03795 YCII-related domain NM058_15230 PF05163 DinB family NM058_15235 PF01925 Sulfite exporter TauE/SafE NM058_15240 PF08666 SAF domain NM058_15240 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NM058_15245 PF01232 Mannitol dehydrogenase Rossmann domain NM058_15245 PF08125 Mannitol dehydrogenase C-terminal domain NM058_15250 PF00356 Bacterial regulatory proteins, lacI family NM058_15255 PF07690 Major Facilitator Superfamily NM058_15260 PF00106 short chain dehydrogenase NM058_15265 PF03786 D-mannonate dehydratase (UxuA) NM058_15270 PF08240 Alcohol dehydrogenase GroES-like domain NM058_15270 PF00107 Zinc-binding dehydrogenase NM058_15290 PF07992 Pyridine nucleotide-disulphide oxidoreductase NM058_15295 PF07849 Protein of unknown function (DUF1641) NM058_15305 PF13536 Putative multidrug resistance efflux transporter NM058_15310 PF00005 ABC transporter NM058_15315 PF03649 Uncharacterised protein family (UPF0014) NM058_15320 PF02602 Uroporphyrinogen-III synthase HemD NM058_15330 PF04101 Glycosyltransferase family 28 C-terminal domain NM058_15335 PF00067 Cytochrome P450 NM058_15350 PF11611 Domain of unknown function (DUF4352) NM058_15365 PF14172 Domain of unknown function (DUF4309) NM058_15370 PF10990 Protein of unknown function (DUF2809) NM058_15375 PF10026 Predicted Zn-dependent protease (DUF2268) NM058_15385 PF10901 Protein of unknown function (DUF2690) NM058_15390 PF11738 Protein of unknown function (DUF3298) NM058_15390 PF13739 Deacetylase PdaC NM058_15390 PF01522 Polysaccharide deacetylase NM058_15405 PF14154 Domain of unknown function (DUF4306) NM058_15410 PF13783 Domain of unknown function (DUF4177) NM058_15425 PF13302 Acetyltransferase (GNAT) domain NM058_15440 PF01238 Phosphomannose isomerase type I NM058_15450 PF08279 HTH domain NM058_15450 PF05043 Mga helix-turn-helix domain NM058_15450 PF00874 PRD domain NM058_15450 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NM058_15475 PF03992 Antibiotic biosynthesis monooxygenase NM058_15490 PF13302 Acetyltransferase (GNAT) domain NM058_15495 PF01053 Cys/Met metabolism PLP-dependent enzyme NM058_15505 PF00756 Putative esterase NM058_15515 PF13673 Acetyltransferase (GNAT) domain NM058_15530 PF14069 Stage VI sporulation protein F NM058_15545 PF07098 Protein of unknown function (DUF1360) NM058_15550 PF07552 Spore Coat Protein X and V domain NM058_15560 PF07552 Spore Coat Protein X and V domain NM058_15565 PF10612 Spore coat protein Z NM058_15570 PF10612 Spore coat protein Z NM058_15575 PF14153 Spore coat protein CotO NM058_15590 PF00899 ThiF family NM058_15595 PF05690 Thiazole biosynthesis protein ThiG NM058_15600 PF02597 ThiS family NM058_15605 PF01266 FAD dependent oxidoreductase NM058_15615 PF03070 TENA/THI-4/PQQC family NM058_15625 PF00149 Calcineurin-like phosphoesterase NM058_15630 PF00849 RNA pseudouridylate synthase NM058_15635 PF01513 ATP-NAD kinase NM058_15640 PF04607 Region found in RelA / SpoT proteins NM058_15650 PF01928 CYTH domain NM058_15655 PF01464 Transglycosylase SLT domain NM058_15660 PF01152 Bacterial-like globin NM058_15675 PF08439 Oligopeptidase F NM058_15675 PF01432 Peptidase family M3 NM058_15685 PF05389 Negative regulator of genetic competence (MecA) NM058_15700 PF03960 ArsC family NM058_15705 PF13508 Acetyltransferase (GNAT) domain NM058_15715 PF00005 ABC transporter NM058_15715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NM058_15725 PF00528 Binding-protein-dependent transport system inner membrane component NM058_15725 PF12911 N-terminal TM domain of oligopeptide transport permease C NM058_15730 PF00528 Binding-protein-dependent transport system inner membrane component NM058_15735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NM058_15740 PF00579 tRNA synthetases class I (W and Y) NM058_15745 PF12227 Protein of unknown function (DUF3603) NM058_15750 PF00528 Binding-protein-dependent transport system inner membrane component NM058_15750 PF12911 N-terminal TM domain of oligopeptide transport permease C NM058_15755 PF00528 Binding-protein-dependent transport system inner membrane component NM058_15760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NM058_15780 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_15780 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_15785 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NM058_15785 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NM058_15795 PF10815 ComZ NM058_15800 PF02608 ABC transporter substrate-binding protein PnrA-like NM058_15815 PF11151 Protein of unknown function (DUF2929) NM058_15820 PF14168 YjzC-like protein NM058_15825 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NM058_15825 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NM058_15835 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NM058_15835 PF00117 Glutamine amidotransferase class-I NM058_15845 PF00696 Amino acid kinase family NM058_15850 PF01960 ArgJ family NM058_15855 PF01118 Semialdehyde dehydrogenase, NAD binding domain NM058_15855 PF02774 Semialdehyde dehydrogenase, dimerisation domain NM058_15860 PF07690 Major Facilitator Superfamily NM058_15865 PF01565 FAD binding domain NM058_15880 PF00326 Prolyl oligopeptidase family NM058_15895 PF12758 Protein of unknown function (DUF3813) NM058_15900 PF12690 Intracellular proteinase inhibitor NM058_15905 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NM058_15905 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NM058_15915 PF02868 Thermolysin metallopeptidase, alpha-helical domain NM058_15915 PF07504 Fungalysin/Thermolysin Propeptide Motif NM058_15915 PF03413 Peptidase propeptide and YPEB domain NM058_15915 PF01447 Thermolysin metallopeptidase, catalytic domain NM058_15920 PF12650 Domain of unknown function (DUF3784) NM058_15930 PF03551 Transcriptional regulator PadR-like family NM058_15935 PF17418 Sporulation delaying protein SdpA NM058_15955 PF04461 Protein of unknown function (DUF520) NM058_15965 PF13673 Acetyltransferase (GNAT) domain NM058_15980 PF13378 Enolase C-terminal domain-like NM058_15980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NM058_15995 PF04029 2-phosphosulpholactate phosphatase NM058_16000 PF01507 Phosphoadenosine phosphosulfate reductase family NM058_16005 PF14306 PUA-like domain NM058_16005 PF01747 ATP-sulfurylase NM058_16015 PF08386 TAP-like protein NM058_16015 PF00561 alpha/beta hydrolase fold NM058_16020 PF13599 Pentapeptide repeats (9 copies) NM058_16030 PF01810 LysE type translocator NM058_16035 PF05163 DinB family NM058_16040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NM058_16040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NM058_16050 PF12833 Helix-turn-helix domain NM058_16050 PF02311 AraC-like ligand binding domain NM058_16070 PF10949 Protein of unknown function (DUF2777) NM058_16075 PF00082 Subtilase family NM058_16075 PF17936 Bacterial Ig domain NM058_16080 PF07457 Protein of unknown function (DUF1516) NM058_16085 PF01557 Fumarylacetoacetate (FAA) hydrolase family NM058_16090 PF08757 CotH kinase protein NM058_16095 PF09388 Spo0E like sporulation regulatory protein NM058_16100 PF10676 Spore germination protein gerPA/gerPF NM058_16105 PF10803 Spore germination GerPB NM058_16110 PF10737 Spore germination protein GerPC NM058_16120 PF10970 Spore germination protein GerPE NM058_16125 PF10676 Spore germination protein gerPA/gerPF NM058_16135 PF13476 AAA domain NM058_16150 PF13361 UvrD-like helicase C-terminal domain NM058_16150 PF12705 PD-(D/E)XK nuclease superfamily NM058_16155 PF02915 Rubrerythrin NM058_16160 PF03860 Domain of Unknown Function (DUF326) NM058_16165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NM058_16165 PF12793 Sugar transport-related sRNA regulator N-term NM058_16170 PF07690 Major Facilitator Superfamily NM058_16175 PF05145 Transition state regulatory protein AbrB NM058_16185 PF01047 MarR family NM058_16190 PF01494 FAD binding domain NM058_16195 PF10502 Signal peptidase, peptidase S26 NM058_16200 PF09335 SNARE associated Golgi protein NM058_16210 PF11755 Protein of unknown function (DUF3311) NM058_16215 PF00474 Sodium:solute symporter family NM058_16220 PF05901 Excalibur calcium-binding domain NM058_16230 PF06338 ComK protein NM058_16235 PF08858 IDEAL domain NM058_16250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NM058_16260 PF00501 AMP-binding enzyme NM058_16260 PF13193 AMP-binding enzyme C-terminal domain NM058_16270 PF00300 Histidine phosphatase superfamily (branch 1) NM058_16275 PF01497 Periplasmic binding protein NM058_16285 PF08240 Alcohol dehydrogenase GroES-like domain NM058_16285 PF00107 Zinc-binding dehydrogenase NM058_16295 PF05922 Peptidase inhibitor I9 NM058_16295 PF00082 Subtilase family NM058_16300 PF16491 CAAX prenyl protease N-terminal, five membrane helices NM058_16300 PF01435 Peptidase family M48 NM058_16310 PF13193 AMP-binding enzyme C-terminal domain NM058_16310 PF00501 AMP-binding enzyme NM058_16320 PF03099 Biotin/lipoate A/B protein ligase family NM058_16320 PF10437 Bacterial lipoate protein ligase C-terminus NM058_16330 PF14149 YhfH-like protein NM058_16345 PF05343 M42 glutamyl aminopeptidase NM058_16355 PF10086 YhfC intramembrane metalloprotease NM058_16360 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NM058_16360 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NM058_16370 PF17932 Tetracyclin repressor-like, C-terminal domain NM058_16370 PF00440 Bacterial regulatory proteins, tetR family NM058_16375 PF01593 Flavin containing amine oxidoreductase NM058_16380 PF00762 Ferrochelatase NM058_16390 PF00905 Penicillin binding protein transpeptidase domain NM058_16390 PF00912 Transglycosylase NM058_16395 PF03992 Antibiotic biosynthesis monooxygenase NM058_16410 PF01546 Peptidase family M20/M25/M40 NM058_16410 PF07687 Peptidase dimerisation domain NM058_16415 PF12787 EcsC protein family NM058_16430 PF01230 HIT domain NM058_16440 PF17099 Tryptophan transporter TrpP NM058_16450 PF12732 YtxH-like protein NM058_16455 PF01047 MarR family NM058_16460 PF08963 Protein of unknown function (DUF1878) NM058_16475 PF09680 Family of unknown function NM058_16480 PF09680 Family of unknown function NM058_16490 PF14147 Sporulation protein YhaL NM058_16505 PF00149 Calcineurin-like phosphoesterase NM058_16515 PF00005 ABC transporter NM058_16515 PF13732 Domain of unknown function (DUF4162) NM058_16520 PF14120 YhzD-like protein NM058_16525 PF00378 Enoyl-CoA hydratase/isomerase NM058_16535 PF02080 TrkA-C domain NM058_16540 PF00999 Sodium/hydrogen exchanger family NM058_16555 PF08713 DNA alkylation repair enzyme NM058_16560 PF06133 Control of competence regulator ComK, YlbF/YmcA NM058_16565 PF04286 Protein of unknown function (DUF445) NM058_16570 PF14398 YheC/D like ATP-grasp NM058_16580 PF17277 Family of unknown function (DUF5342) NM058_16585 PF00269 Small, acid-soluble spore proteins, alpha/beta type NM058_16595 PF13460 NAD(P)H-binding NM058_16615 PF00582 Universal stress protein family NM058_16620 PF03553 Na+/H+ antiporter family NM058_16625 PF01063 Amino-transferase class IV NM058_16630 PF01522 Polysaccharide deacetylase NM058_16635 PF02146 Sir2 family NM058_16640 PF00924 Mechanosensitive ion channel NM058_16645 PF17444 Uncharacterized YhdX-like NM058_16650 PF03009 Glycerophosphoryl diester phosphodiesterase family NM058_16655 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NM058_16660 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NM058_16665 PF00571 CBS domain NM058_16665 PF01595 Cyclin M transmembrane N-terminal domain NM058_16665 PF03471 Transporter associated domain NM058_16675 PF13411 MerR HTH family regulatory protein NM058_16680 PF00571 CBS domain NM058_16680 PF03471 Transporter associated domain NM058_16680 PF01595 Cyclin M transmembrane N-terminal domain NM058_16690 PF01266 FAD dependent oxidoreductase NM058_16695 PF01553 Acyltransferase NM058_16700 PF00248 Aldo/keto reductase family NM058_16705 PF04542 Sigma-70 region 2 NM058_16705 PF08281 Sigma-70, region 4 NM058_16710 PF13791 Sigma factor regulator C-terminal NM058_16710 PF13800 Sigma factor regulator N-terminal NM058_16715 PF17453 Sigma-M inhibitor NM058_16720 PF00583 Acetyltransferase (GNAT) family NM058_16725 PF00392 Bacterial regulatory proteins, gntR family NM058_16725 PF00155 Aminotransferase class I and II NM058_16730 PF00209 Sodium:neurotransmitter symporter family NM058_16735 PF13520 Amino acid permease NM058_16760 PF00245 Alkaline phosphatase NM058_16765 PF04293 SpoVR like protein NM058_16775 PF02082 Transcriptional regulator NM058_16780 PF01476 LysM domain NM058_16780 PF00877 NlpC/P60 family NM058_16785 PF13028 Protein of unknown function (DUF3889) NM058_16790 PF14148 YhdB-like protein NM058_16800 PF00196 Bacterial regulatory proteins, luxR family NM058_16800 PF00072 Response regulator receiver domain NM058_16805 PF13185 GAF domain NM058_16805 PF07730 Histidine kinase NM058_16815 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NM058_16815 PF01266 FAD dependent oxidoreductase NM058_16820 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NM058_16820 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NM058_16825 PF00230 Major intrinsic protein NM058_16830 PF04309 Glycerol-3-phosphate responsive antiterminator NM058_16835 PF00202 Aminotransferase class-III NM058_16845 PF00583 Acetyltransferase (GNAT) family NM058_16845 PF00795 Carbon-nitrogen hydrolase NM058_16850 PF13419 Haloacid dehalogenase-like hydrolase NM058_16855 PF00571 CBS domain NM058_16860 PF17326 Family of unknown function (DUF5365) NM058_16865 PF00849 RNA pseudouridylate synthase NM058_16865 PF01479 S4 domain NM058_16870 PF04203 Sortase domain NM058_16875 PF02872 5'-nucleotidase, C-terminal domain NM058_16875 PF00746 LPXTG cell wall anchor motif NM058_16875 PF00565 Staphylococcal nuclease homologue NM058_16875 PF00149 Calcineurin-like phosphoesterase NM058_16880 PF07875 Coat F domain NM058_16890 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NM058_16910 PF00583 Acetyltransferase (GNAT) family NM058_16925 PF03180 NLPA lipoprotein NM058_16930 PF00313 'Cold-shock' DNA-binding domain NM058_16935 PF12679 ABC-2 family transporter protein NM058_16940 PF00005 ABC transporter NM058_16950 PF00392 Bacterial regulatory proteins, gntR family NM058_16965 PF03358 NADPH-dependent FMN reductase NM058_16980 PF01047 MarR family NM058_16985 PF04285 Protein of unknown function (DUF444) NM058_16990 PF08298 PrkA AAA domain NM058_16990 PF06798 PrkA serine protein kinase C-terminal domain NM058_17000 PF04519 Polymer-forming cytoskeletal NM058_17015 PF12671 Putative amidase domain NM058_17020 PF08331 Domain of unknown function (DUF1730) NM058_17045 PF00253 Ribosomal protein S14p/S29e NM058_17060 PF00528 Binding-protein-dependent transport system inner membrane component NM058_17065 PF09084 NMT1/THI5 like NM058_17070 PF00005 ABC transporter NM058_17075 PF00199 Catalase NM058_17075 PF06628 Catalase-related immune-responsive NM058_17085 PF13667 ThiC-associated domain NM058_17085 PF01964 Radical SAM ThiC family NM058_17090 PF03575 Peptidase family S51 NM058_17095 PF07875 Coat F domain NM058_17105 PF07070 SpoOM protein NM058_17110 PF13847 Methyltransferase domain NM058_17110 PF03551 Transcriptional regulator PadR-like family NM058_17135 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NM058_17140 PF01261 Xylose isomerase-like TIM barrel NM058_17145 PF00975 Thioesterase domain NM058_17145 PF14765 Polyketide synthase dehydratase NM058_17145 PF00550 Phosphopantetheine attachment site NM058_17145 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17145 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17145 PF08242 Methyltransferase domain NM058_17145 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17155 PF00378 Enoyl-CoA hydratase/isomerase NM058_17160 PF00378 Enoyl-CoA hydratase/isomerase NM058_17175 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17175 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17175 PF08659 KR domain NM058_17175 PF08242 Methyltransferase domain NM058_17175 PF00550 Phosphopantetheine attachment site NM058_17175 PF14765 Polyketide synthase dehydratase NM058_17175 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17185 PF14765 Polyketide synthase dehydratase NM058_17185 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17185 PF00550 Phosphopantetheine attachment site NM058_17185 PF08242 Methyltransferase domain NM058_17185 PF08659 KR domain NM058_17185 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17185 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17190 PF14765 Polyketide synthase dehydratase NM058_17190 PF00550 Phosphopantetheine attachment site NM058_17190 PF08242 Methyltransferase domain NM058_17190 PF08659 KR domain NM058_17190 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17190 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17190 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17195 PF08659 KR domain NM058_17195 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17195 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17195 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17195 PF08242 Methyltransferase domain NM058_17195 PF00550 Phosphopantetheine attachment site NM058_17195 PF14765 Polyketide synthase dehydratase NM058_17200 PF08659 KR domain NM058_17200 PF00501 AMP-binding enzyme NM058_17200 PF14765 Polyketide synthase dehydratase NM058_17200 PF13193 AMP-binding enzyme C-terminal domain NM058_17200 PF00668 Condensation domain NM058_17200 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17200 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17200 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17200 PF00550 Phosphopantetheine attachment site NM058_17205 PF00501 AMP-binding enzyme NM058_17205 PF13193 AMP-binding enzyme C-terminal domain NM058_17205 PF14765 Polyketide synthase dehydratase NM058_17205 PF00550 Phosphopantetheine attachment site NM058_17205 PF08659 KR domain NM058_17205 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17205 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17205 PF00668 Condensation domain NM058_17205 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17210 PF13193 AMP-binding enzyme C-terminal domain NM058_17210 PF00501 AMP-binding enzyme NM058_17210 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17210 PF08659 KR domain NM058_17210 PF00550 Phosphopantetheine attachment site NM058_17210 PF14765 Polyketide synthase dehydratase NM058_17210 PF00668 Condensation domain NM058_17210 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17210 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17215 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17215 PF14765 Polyketide synthase dehydratase NM058_17215 PF00550 Phosphopantetheine attachment site NM058_17215 PF08659 KR domain NM058_17215 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17215 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17215 PF00668 Condensation domain NM058_17215 PF13193 AMP-binding enzyme C-terminal domain NM058_17215 PF00501 AMP-binding enzyme NM058_17220 PF14765 Polyketide synthase dehydratase NM058_17220 PF00550 Phosphopantetheine attachment site NM058_17220 PF08659 KR domain NM058_17220 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17220 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17220 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17225 PF14765 Polyketide synthase dehydratase NM058_17225 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17225 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17225 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17225 PF08659 KR domain NM058_17225 PF08242 Methyltransferase domain NM058_17225 PF00550 Phosphopantetheine attachment site NM058_17240 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17240 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17240 PF08659 KR domain NM058_17240 PF00550 Phosphopantetheine attachment site NM058_17240 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17240 PF14765 Polyketide synthase dehydratase NM058_17240 PF08242 Methyltransferase domain NM058_17245 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17245 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17245 PF00550 Phosphopantetheine attachment site NM058_17245 PF14765 Polyketide synthase dehydratase NM058_17245 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17245 PF08659 KR domain NM058_17250 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17250 PF14765 Polyketide synthase dehydratase NM058_17250 PF00550 Phosphopantetheine attachment site NM058_17250 PF08242 Methyltransferase domain NM058_17250 PF08659 KR domain NM058_17250 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17250 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17255 PF08659 KR domain NM058_17255 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17255 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17255 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17255 PF14765 Polyketide synthase dehydratase NM058_17255 PF00550 Phosphopantetheine attachment site NM058_17260 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17260 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17260 PF08659 KR domain NM058_17260 PF00550 Phosphopantetheine attachment site NM058_17260 PF14765 Polyketide synthase dehydratase NM058_17260 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17265 PF00501 AMP-binding enzyme NM058_17265 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17265 PF08659 KR domain NM058_17265 PF00550 Phosphopantetheine attachment site NM058_17265 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17265 PF00668 Condensation domain NM058_17265 PF13193 AMP-binding enzyme C-terminal domain NM058_17265 PF14765 Polyketide synthase dehydratase NM058_17265 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17270 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17270 PF14765 Polyketide synthase dehydratase NM058_17270 PF00550 Phosphopantetheine attachment site NM058_17270 PF08242 Methyltransferase domain NM058_17270 PF08659 KR domain NM058_17270 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17270 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17275 PF14765 Polyketide synthase dehydratase NM058_17275 PF00550 Phosphopantetheine attachment site NM058_17275 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_17275 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_17275 PF16197 Ketoacyl-synthetase C-terminal extension NM058_17275 PF08659 KR domain NM058_17285 PF00753 Metallo-beta-lactamase superfamily NM058_17290 PF00550 Phosphopantetheine attachment site NM058_17305 PF01209 ubiE/COQ5 methyltransferase family NM058_17310 PF01554 MatE NM058_17315 PF00698 Acyl transferase domain NM058_17425 PF11023 Zinc-ribbon containing domain NM058_17435 PF00578 AhpC/TSA family NM058_17445 PF06081 Aromatic acid exporter family member 1 NM058_17450 PF00664 ABC transporter transmembrane region NM058_17450 PF00005 ABC transporter NM058_17455 PF04167 Protein of unknown function (DUF402) NM058_17460 PF14182 YgaB-like protein NM058_17465 PF04259 Small, acid-soluble spore protein, gamma-type NM058_17480 PF00730 HhH-GPD superfamily base excision DNA repair protein NM058_17480 PF14815 NUDIX domain NM058_17485 PF04307 LexA-binding, inner membrane-associated putative hydrolase NM058_17495 PF00535 Glycosyl transferase family 2 NM058_17500 PF00561 alpha/beta hydrolase fold NM058_17505 PF13630 SdpI/YhfL protein family NM058_17515 PF14043 WVELL protein NM058_17520 PF08176 Small acid-soluble spore protein K family NM058_17530 PF08838 Protein of unknown function (DUF1811) NM058_17535 PF02631 RecX family NM058_17540 PF01370 NAD dependent epimerase/dehydratase family NM058_17540 PF08338 Domain of unknown function (DUF1731) NM058_17545 PF14152 YfhE-like protein NM058_17550 PF14151 YfhD-like protein NM058_17555 PF00881 Nitroreductase family NM058_17560 PF02567 Phenazine biosynthesis-like protein NM058_17570 PF01032 FecCD transport family NM058_17575 PF01497 Periplasmic binding protein NM058_17585 PF01047 MarR family NM058_17590 PF07690 Major Facilitator Superfamily NM058_17595 PF12867 DinB superfamily NM058_17605 PF00005 ABC transporter NM058_17620 PF00440 Bacterial regulatory proteins, tetR family NM058_17625 PF01674 Lipase (class 2) NM058_17630 PF03551 Transcriptional regulator PadR-like family NM058_17630 PF10400 Virulence activator alpha C-term NM058_17655 PF00196 Bacterial regulatory proteins, luxR family NM058_17655 PF00072 Response regulator receiver domain NM058_17670 PF01261 Xylose isomerase-like TIM barrel NM058_17680 PF02311 AraC-like ligand binding domain NM058_17680 PF12833 Helix-turn-helix domain NM058_17685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NM058_17690 PF07681 DoxX NM058_17700 PF00005 ABC transporter NM058_17700 PF00664 ABC transporter transmembrane region NM058_17705 PF02378 Phosphotransferase system, EIIC NM058_17705 PF00367 phosphotransferase system, EIIB NM058_17715 PF11975 Family 4 glycosyl hydrolase C-terminal domain NM058_17715 PF02056 Family 4 glycosyl hydrolase NM058_17720 PF06013 Proteins of 100 residues with WXG NM058_17735 PF17353 Family of unknown function (DUF5381) NM058_17740 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NM058_17745 PF08141 Small acid-soluble spore protein H family NM058_17760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NM058_17760 PF00364 Biotin-requiring enzyme NM058_17760 PF02817 e3 binding domain NM058_17765 PF02779 Transketolase, pyrimidine binding domain NM058_17765 PF02780 Transketolase, C-terminal domain NM058_17770 PF00676 Dehydrogenase E1 component NM058_17785 PF07687 Peptidase dimerisation domain NM058_17785 PF01546 Peptidase family M20/M25/M40 NM058_17790 PF03806 AbgT putative transporter family NM058_17800 PF01207 Dihydrouridine synthase (Dus) NM058_17810 PF00730 HhH-GPD superfamily base excision DNA repair protein NM058_17815 PF01544 CorA-like Mg2+ transporter protein NM058_17835 PF08756 YfkB-like domain NM058_17835 PF04055 Radical SAM superfamily NM058_17840 PF00924 Mechanosensitive ion channel NM058_17845 PF14167 YfkD-like protein NM058_17870 PF01451 Low molecular weight phosphotyrosine protein phosphatase NM058_17875 PF06569 Protein of unknown function (DUF1128) NM058_17880 PF07690 Major Facilitator Superfamily NM058_17890 PF02872 5'-nucleotidase, C-terminal domain NM058_17890 PF00149 Calcineurin-like phosphoesterase NM058_17895 PF00881 Nitroreductase family NM058_17900 PF00392 Bacterial regulatory proteins, gntR family NM058_17900 PF07702 UTRA domain NM058_17910 PF02378 Phosphotransferase system, EIIC NM058_17910 PF00367 phosphotransferase system, EIIB NM058_17930 PF09350 Domain of unknown function (DUF1992) NM058_17935 PF00884 Sulfatase NM058_17940 PF00367 phosphotransferase system, EIIB NM058_17940 PF02378 Phosphotransferase system, EIIC NM058_17950 PF11588 Protein of unknown function (DUF3243) NM058_17960 PF11121 Protein of unknown function (DUF2639) NM058_17965 PF03475 3-alpha domain NM058_17965 PF03473 MOSC domain NM058_17975 PF02898 Nitric oxide synthase, oxygenase domain NM058_17980 PF00753 Metallo-beta-lactamase superfamily NM058_17985 PF03600 Citrate transporter NM058_17990 PF03401 Tripartite tricarboxylate transporter family receptor NM058_17995 PF00072 Response regulator receiver domain NM058_17995 PF12431 Transcriptional regulator NM058_17995 PF08279 HTH domain NM058_18005 PF00939 Sodium:sulfate symporter transmembrane region NM058_18010 PF00544 Pectate lyase NM058_18015 PF11181 Heat induced stress protein YflT NM058_18020 PF11486 Protein of unknown function (DUF3212) NM058_18025 PF01497 Periplasmic binding protein NM058_18030 PF01032 FecCD transport family NM058_18035 PF01032 FecCD transport family NM058_18045 PF16884 N-terminal domain of oxidoreductase NM058_18045 PF00107 Zinc-binding dehydrogenase NM058_18050 PF00583 Acetyltransferase (GNAT) family NM058_18070 PF13411 MerR HTH family regulatory protein NM058_18090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NM058_18100 PF13520 Amino acid permease NM058_18105 PF13419 Haloacid dehalogenase-like hydrolase NM058_18110 PF07690 Major Facilitator Superfamily NM058_18115 PF03407 Nucleotide-diphospho-sugar transferase NM058_18120 PF00535 Glycosyl transferase family 2 NM058_18125 PF03407 Nucleotide-diphospho-sugar transferase NM058_18145 PF00667 FAD binding domain NM058_18145 PF00258 Flavodoxin NM058_18145 PF00175 Oxidoreductase NAD-binding domain NM058_18145 PF00067 Cytochrome P450 NM058_18150 PF13037 Domain of unknown function (DUF3898) NM058_18150 PF13039 Protein of unknown function (DUF3900) NM058_18165 PF01047 MarR family NM058_18170 PF00892 EamA-like transporter family NM058_18175 PF01027 Inhibitor of apoptosis-promoting Bax1 NM058_18180 PF10055 Uncharacterized small protein (DUF2292) NM058_18185 PF01740 STAS domain NM058_18185 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain NM058_18195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NM058_18200 PF03992 Antibiotic biosynthesis monooxygenase NM058_18205 PF04239 Protein of unknown function (DUF421) NM058_18225 PF01547 Bacterial extracellular solute-binding protein NM058_18235 PF02449 Beta-galactosidase NM058_18235 PF08533 Beta-galactosidase C-terminal domain NM058_18235 PF08532 Beta-galactosidase trimerisation domain NM058_18240 PF00657 GDSL-like Lipase/Acylhydrolase NM058_18245 PF18370 Rhamnogalacturonan I lyases beta-sheet domain NM058_18245 PF01839 FG-GAP repeat NM058_18250 PF18370 Rhamnogalacturonan I lyases beta-sheet domain NM058_18255 PF04854 Protein of unknown function, DUF624 NM058_18260 PF09224 Domain of unknown function (DUF1961) NM058_18265 PF13472 GDSL-like Lipase/Acylhydrolase family NM058_18270 PF12833 Helix-turn-helix domain NM058_18275 PF07470 Glycosyl Hydrolase Family 88 NM058_18285 PF00528 Binding-protein-dependent transport system inner membrane component NM058_18300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_18300 PF00672 HAMP domain NM058_18300 PF02743 Cache domain NM058_18300 PF06580 Histidine kinase NM058_18310 PF14150 YesK-like protein NM058_18315 PF00583 Acetyltransferase (GNAT) family NM058_18325 PF12652 CotJB protein NM058_18330 PF11007 Spore coat associated protein JA (CotJA) NM058_18335 PF01370 NAD dependent epimerase/dehydratase family NM058_18340 PF12680 SnoaL-like domain NM058_18345 PF00440 Bacterial regulatory proteins, tetR family NM058_18355 PF01709 Transcriptional regulator NM058_18405 PF04634 Protein of unknown function, DUF600 NM058_18410 PF04634 Protein of unknown function, DUF600 NM058_18415 PF04634 Protein of unknown function, DUF600 NM058_18430 PF01938 TRAM domain NM058_18430 PF05958 tRNA (Uracil-5-)-methyltransferase NM058_18435 PF00781 Diacylglycerol kinase catalytic domain NM058_18450 PF02934 GatB/GatE catalytic domain NM058_18450 PF02637 GatB domain NM058_18455 PF01425 Amidase NM058_18460 PF02686 Glu-tRNAGln amidotransferase C subunit NM058_18465 PF00474 Sodium:solute symporter family NM058_18470 PF02308 MgtC family NM058_18475 PF00245 Alkaline phosphatase NM058_18480 PF00245 Alkaline phosphatase NM058_18485 PF01636 Phosphotransferase enzyme family NM058_18490 PF00501 AMP-binding enzyme NM058_18490 PF13193 AMP-binding enzyme C-terminal domain NM058_18490 PF00668 Condensation domain NM058_18490 PF00550 Phosphopantetheine attachment site NM058_18495 PF00501 AMP-binding enzyme NM058_18495 PF13193 AMP-binding enzyme C-terminal domain NM058_18495 PF00668 Condensation domain NM058_18495 PF00550 Phosphopantetheine attachment site NM058_18500 PF00550 Phosphopantetheine attachment site NM058_18500 PF00668 Condensation domain NM058_18500 PF13193 AMP-binding enzyme C-terminal domain NM058_18500 PF00501 AMP-binding enzyme NM058_18500 PF00975 Thioesterase domain NM058_18505 PF00668 Condensation domain NM058_18505 PF16197 Ketoacyl-synthetase C-terminal extension NM058_18505 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_18505 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_18505 PF00550 Phosphopantetheine attachment site NM058_18505 PF00698 Acyl transferase domain NM058_18510 PF00698 Acyl transferase domain NM058_18510 PF00668 Condensation domain NM058_18510 PF16197 Ketoacyl-synthetase C-terminal extension NM058_18510 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_18510 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_18510 PF00550 Phosphopantetheine attachment site NM058_18515 PF00550 Phosphopantetheine attachment site NM058_18515 PF00501 AMP-binding enzyme NM058_18515 PF00668 Condensation domain NM058_18515 PF16197 Ketoacyl-synthetase C-terminal extension NM058_18515 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_18515 PF14765 Polyketide synthase dehydratase NM058_18515 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_18515 PF08659 KR domain NM058_18515 PF13193 AMP-binding enzyme C-terminal domain NM058_18520 PF00698 Acyl transferase domain NM058_18520 PF00668 Condensation domain NM058_18520 PF16197 Ketoacyl-synthetase C-terminal extension NM058_18520 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_18520 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_18520 PF00550 Phosphopantetheine attachment site NM058_18525 PF14765 Polyketide synthase dehydratase NM058_18525 PF00550 Phosphopantetheine attachment site NM058_18525 PF08659 KR domain NM058_18525 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_18525 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_18525 PF16197 Ketoacyl-synthetase C-terminal extension NM058_18525 PF00698 Acyl transferase domain NM058_18530 PF00698 Acyl transferase domain NM058_18530 PF00668 Condensation domain NM058_18530 PF00550 Phosphopantetheine attachment site NM058_18530 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_18530 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_18530 PF16197 Ketoacyl-synthetase C-terminal extension NM058_18535 PF00501 AMP-binding enzyme NM058_18535 PF13193 AMP-binding enzyme C-terminal domain NM058_18535 PF00668 Condensation domain NM058_18535 PF00550 Phosphopantetheine attachment site NM058_18540 PF00668 Condensation domain NM058_18540 PF00975 Thioesterase domain NM058_18540 PF00550 Phosphopantetheine attachment site NM058_18540 PF13193 AMP-binding enzyme C-terminal domain NM058_18540 PF00501 AMP-binding enzyme NM058_18550 PF00668 Condensation domain NM058_18550 PF13193 AMP-binding enzyme C-terminal domain NM058_18550 PF00550 Phosphopantetheine attachment site NM058_18550 PF00501 AMP-binding enzyme NM058_18555 PF13193 AMP-binding enzyme C-terminal domain NM058_18555 PF00501 AMP-binding enzyme NM058_18555 PF00550 Phosphopantetheine attachment site NM058_18555 PF00668 Condensation domain NM058_18555 PF00975 Thioesterase domain NM058_18560 PF00698 Acyl transferase domain NM058_18560 PF14765 Polyketide synthase dehydratase NM058_18560 PF00550 Phosphopantetheine attachment site NM058_18560 PF08659 KR domain NM058_18560 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_18560 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_18560 PF16197 Ketoacyl-synthetase C-terminal extension NM058_18565 PF00698 Acyl transferase domain NM058_18565 PF00668 Condensation domain NM058_18565 PF16197 Ketoacyl-synthetase C-terminal extension NM058_18565 PF00109 Beta-ketoacyl synthase, N-terminal domain NM058_18565 PF02801 Beta-ketoacyl synthase, C-terminal domain NM058_18565 PF00550 Phosphopantetheine attachment site NM058_18570 PF13193 AMP-binding enzyme C-terminal domain NM058_18570 PF00668 Condensation domain NM058_18570 PF00975 Thioesterase domain NM058_18570 PF00550 Phosphopantetheine attachment site NM058_18570 PF00501 AMP-binding enzyme NM058_18575 PF00501 AMP-binding enzyme NM058_18575 PF13193 AMP-binding enzyme C-terminal domain NM058_18575 PF00668 Condensation domain NM058_18575 PF00550 Phosphopantetheine attachment site NM058_18575 PF00975 Thioesterase domain NM058_18580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NM058_18580 PF02770 Acyl-CoA dehydrogenase, middle domain NM058_18580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NM058_18595 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NM058_18595 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NM058_18600 PF00975 Thioesterase domain NM058_18615 PF00144 Beta-lactamase NM058_18620 PF00501 AMP-binding enzyme NM058_18620 PF00668 Condensation domain NM058_18620 PF00550 Phosphopantetheine attachment site NM058_18620 PF13193 AMP-binding enzyme C-terminal domain NM058_18625 PF07690 Major Facilitator Superfamily NM058_18635 PF00533 BRCA1 C Terminus (BRCT) domain NM058_18635 PF01653 NAD-dependent DNA ligase adenylation domain NM058_18635 PF12826 Helix-hairpin-helix motif NM058_18635 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NM058_18635 PF03120 NAD-dependent DNA ligase OB-fold domain NM058_18655 PF01371 Trp repressor protein NM058_18660 PF17479 Protein of unknown function (DUF3048) C-terminal domain NM058_18660 PF11258 Protein of unknown function (DUF3048) N-terminal domain NM058_18670 PF11127 Protein of unknown function (DUF2892) NM058_18680 PF01037 Lrp/AsnC ligand binding domain NM058_18685 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NM058_18685 PF02844 Phosphoribosylglycinamide synthetase, N domain NM058_18685 PF02843 Phosphoribosylglycinamide synthetase, C domain NM058_18695 PF00551 Formyl transferase NM058_18700 PF00586 AIR synthase related protein, N-terminal domain NM058_18700 PF02769 AIR synthase related protein, C-terminal domain NM058_18705 PF00156 Phosphoribosyl transferase domain NM058_18710 PF00586 AIR synthase related protein, N-terminal domain NM058_18710 PF02769 AIR synthase related protein, C-terminal domain NM058_18710 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NM058_18720 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase NM058_18725 PF01259 SAICAR synthetase NM058_18730 PF10397 Adenylosuccinate lyase C-terminus NM058_18730 PF00206 Lyase NM058_18745 PF14044 NETI protein NM058_18750 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NM058_18755 PF13076 Fur-regulated basic protein A NM058_18765 PF00860 Permease family NM058_18775 PF04542 Sigma-70 region 2 NM058_18775 PF04545 Sigma-70, region 4 NM058_18780 PF00117 Glutamine amidotransferase class-I NM058_18780 PF00958 GMP synthase C terminal domain NM058_18780 PF02540 NAD synthase NM058_18790 PF01882 Protein of unknown function DUF58 NM058_18805 PF00324 Amino acid permease NM058_18825 PF14169 Cold-inducible protein YdjO NM058_18835 PF07676 WD40-like Beta Propeller Repeat NM058_18840 PF03330 Lytic transglycolase NM058_18855 PF07885 Ion channel NM058_18860 PF00294 pfkB family carbohydrate kinase NM058_18890 PF00118 TCP-1/cpn60 chaperonin family NM058_18895 PF00166 Chaperonin 10 Kd subunit NM058_18900 PF02517 CPBP intramembrane metalloprotease NM058_18905 PF14146 Domain of unknown function (DUF4305) NM058_18920 PF02629 CoA binding domain NM058_18920 PF06971 Putative DNA-binding protein N-terminus NM058_18925 PF01967 MoaC family NM058_18930 PF00005 ABC transporter NM058_18930 PF16326 ABC transporter C-terminal domain NM058_18930 PF12848 ABC transporter NM058_18935 PF00814 Glycoprotease family NM058_18940 PF00583 Acetyltransferase (GNAT) family NM058_18950 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NM058_18955 PF02769 AIR synthase related protein, C-terminal domain NM058_18955 PF00586 AIR synthase related protein, N-terminal domain NM058_19000 PF02156 Glycosyl hydrolase family 26 NM058_19005 PF01238 Phosphomannose isomerase type I NM058_19015 PF00392 Bacterial regulatory proteins, gntR family NM058_19015 PF07702 UTRA domain NM058_19025 PF02378 Phosphotransferase system, EIIC NM058_19030 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit NM058_19035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NM058_19040 PF07690 Major Facilitator Superfamily NM058_19045 PF07563 Protein of unknown function (DUF1541) NM058_19050 PF01966 HD domain NM058_19055 PF00583 Acetyltransferase (GNAT) family NM058_19060 PF16302 Domain of unknown function (DUF4944) NM058_19065 PF08818 Domain of unknown function (DU1801) NM058_19070 PF00245 Alkaline phosphatase NM058_19075 PF11611 Domain of unknown function (DUF4352) NM058_19075 PF08139 Prokaryotic membrane lipoprotein lipid attachment site NM058_19080 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NM058_19085 PF01476 LysM domain NM058_19085 PF00704 Glycosyl hydrolases family 18 NM058_19090 PF00392 Bacterial regulatory proteins, gntR family NM058_19090 PF07729 FCD domain NM058_19095 PF01925 Sulfite exporter TauE/SafE NM058_19100 PF07690 Major Facilitator Superfamily NM058_19105 PF07690 Major Facilitator Superfamily NM058_19120 PF07883 Cupin domain NM058_19120 PF01381 Helix-turn-helix NM058_19125 PF01047 MarR family NM058_19130 PF00881 Nitroreductase family NM058_19145 PF03176 MMPL family NM058_19150 PF01047 MarR family NM058_19155 PF05163 DinB family NM058_19160 PF00324 Amino acid permease NM058_19165 PF00005 ABC transporter NM058_19165 PF12848 ABC transporter NM058_19175 PF01261 Xylose isomerase-like TIM barrel NM058_19185 PF00356 Bacterial regulatory proteins, lacI family NM058_19190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NM058_19190 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NM058_19200 PF00583 Acetyltransferase (GNAT) family NM058_19205 PF13564 DoxX-like family NM058_19210 PF00440 Bacterial regulatory proteins, tetR family NM058_19220 PF00155 Aminotransferase class I and II NM058_19220 PF00392 Bacterial regulatory proteins, gntR family NM058_19225 PF00085 Thioredoxin NM058_19230 PF07681 DoxX NM058_19235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NM058_19240 PF00881 Nitroreductase family NM058_19250 PF06445 GyrI-like small molecule binding domain NM058_19250 PF13411 MerR HTH family regulatory protein NM058_19255 PF04474 Protein of unknown function (DUF554) NM058_19260 PF03176 MMPL family NM058_19265 PF00196 Bacterial regulatory proteins, luxR family NM058_19265 PF00072 Response regulator receiver domain NM058_19270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_19270 PF07730 Histidine kinase NM058_19285 PF02627 Carboxymuconolactone decarboxylase family NM058_19295 PF01613 Flavin reductase like domain NM058_19300 PF00155 Aminotransferase class I and II NM058_19300 PF00392 Bacterial regulatory proteins, gntR family NM058_19310 PF07739 TipAS antibiotic-recognition domain NM058_19310 PF13411 MerR HTH family regulatory protein NM058_19315 PF02040 Arsenical pump membrane protein NM058_19320 PF01022 Bacterial regulatory protein, arsR family NM058_19325 PF07992 Pyridine nucleotide-disulphide oxidoreductase NM058_19325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NM058_19335 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NM058_19335 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NM058_19340 PF01638 HxlR-like helix-turn-helix NM058_19345 PF06821 Serine hydrolase NM058_19350 PF01575 MaoC like domain NM058_19355 PF00155 Aminotransferase class I and II NM058_19355 PF00392 Bacterial regulatory proteins, gntR family NM058_19365 PF01037 Lrp/AsnC ligand binding domain NM058_19370 PF12706 Beta-lactamase superfamily domain NM058_19380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NM058_19380 PF03466 LysR substrate binding domain NM058_19385 PF05525 Branched-chain amino acid transport protein NM058_19390 PF05544 Proline racemase NM058_19395 PF05544 Proline racemase NM058_19400 PF02954 Bacterial regulatory protein, Fis family NM058_19400 PF13426 PAS domain NM058_19400 PF00158 Sigma-54 interaction domain NM058_19405 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NM058_19405 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NM058_19425 PF01522 Polysaccharide deacetylase NM058_19430 PF03816 Cell envelope-related transcriptional attenuator domain NM058_19435 PF12746 GNAT acetyltransferase NM058_19440 PF00440 Bacterial regulatory proteins, tetR family NM058_19450 PF00381 PTS HPr component phosphorylation site NM058_19455 PF07690 Major Facilitator Superfamily NM058_19460 PF08818 Domain of unknown function (DU1801) NM058_19480 PF02559 CarD-like/TRCF domain NM058_19485 PF00313 'Cold-shock' DNA-binding domain NM058_19495 PF07690 Major Facilitator Superfamily NM058_19520 PF01381 Helix-turn-helix NM058_19540 PF00892 EamA-like transporter family NM058_19545 PF00392 Bacterial regulatory proteins, gntR family NM058_19545 PF00155 Aminotransferase class I and II NM058_19555 PF00892 EamA-like transporter family NM058_19560 PF13460 NAD(P)H-binding NM058_19565 PF13411 MerR HTH family regulatory protein NM058_19565 PF06445 GyrI-like small molecule binding domain NM058_19570 PF03358 NADPH-dependent FMN reductase NM058_19575 PF03060 Nitronate monooxygenase NM058_19580 PF01047 MarR family NM058_19635 PF10263 SprT-like family NM058_19635 PF17283 SprT-like zinc ribbon domain NM058_19645 PF16921 Tex protein YqgF-like domain NM058_19645 PF09371 Tex-like protein N-terminal domain NM058_19645 PF17674 HHH domain NM058_19645 PF00575 S1 RNA binding domain NM058_19650 PF07228 Stage II sporulation protein E (SpoIIE) NM058_19655 PF04545 Sigma-70, region 4 NM058_19655 PF04539 Sigma-70 region 3 NM058_19655 PF04542 Sigma-70 region 2 NM058_19660 PF13581 Histidine kinase-like ATPase domain NM058_19665 PF01740 STAS domain NM058_19670 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain NM058_19670 PF07228 Stage II sporulation protein E (SpoIIE) NM058_19675 PF13581 Histidine kinase-like ATPase domain NM058_19680 PF01740 STAS domain NM058_19685 PF01740 STAS domain NM058_19685 PF08678 Rsbr N terminal NM058_19690 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NM058_19695 PF01402 Ribbon-helix-helix protein, copG family NM058_19700 PF01168 Alanine racemase, N-terminal domain NM058_19700 PF00842 Alanine racemase, C-terminal domain NM058_19710 PF01648 4'-phosphopantetheinyl transferase superfamily NM058_19715 PF01694 Rhomboid family NM058_19725 PF03703 Bacterial PH domain NM058_19730 PF00271 Helicase conserved C-terminal domain NM058_19730 PF00270 DEAD/DEAH box helicase NM058_19740 PF01820 D-ala D-ala ligase N-terminus NM058_19740 PF07478 D-ala D-ala ligase C-terminus NM058_19745 PF00085 Thioredoxin NM058_19760 PF13040 Fur-regulated basic protein B NM058_19765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NM058_19765 PF02770 Acyl-CoA dehydrogenase, middle domain NM058_19765 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NM058_19780 PF00005 ABC transporter NM058_19790 PF01594 AI-2E family transporter NM058_19800 PF08279 HTH domain NM058_19800 PF00072 Response regulator receiver domain NM058_19810 PF03480 Bacterial extracellular solute-binding protein, family 7 NM058_19820 PF16291 Domain of unknown function (DUF4937 NM058_19825 PF07883 Cupin domain NM058_19830 PF10685 Stress-induced bacterial acidophilic repeat motif NM058_19830 PF00477 Small hydrophilic plant seed protein NM058_19840 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) NM058_19845 PF04226 Transglycosylase associated protein NM058_19885 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) NM058_19890 PF00990 Diguanylate cyclase, GGDEF domain NM058_19900 PF01751 Toprim domain NM058_19900 PF01131 DNA topoisomerase NM058_19905 PF01037 Lrp/AsnC ligand binding domain NM058_19910 PF12823 Domain of unknown function (DUF3817) NM058_19915 PF10997 Alternate to MurJ NM058_19920 PF16242 Pyridoxamine 5'-phosphate oxidase like NM058_19925 PF13302 Acetyltransferase (GNAT) domain NM058_19940 PF13649 Methyltransferase domain NM058_19955 PF00248 Aldo/keto reductase family NM058_19965 PF03992 Antibiotic biosynthesis monooxygenase NM058_19970 PF13129 Protein of unknown function (DUF3953) NM058_19975 PF13472 GDSL-like Lipase/Acylhydrolase family NM058_19980 PF01614 Bacterial transcriptional regulator NM058_19980 PF09339 IclR helix-turn-helix domain NM058_19985 PF02626 Carboxyltransferase domain, subdomain A and B NM058_19990 PF02682 Carboxyltransferase domain, subdomain C and D NM058_19995 PF07286 Protein of unknown function (DUF1445) NM058_20005 PF03746 LamB/YcsF family NM058_20020 PF07977 FabA-like domain NM058_20025 PF01738 Dienelactone hydrolase family NM058_20030 PF00180 Isocitrate/isopropylmalate dehydrogenase NM058_20040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NM058_20065 PF07987 Domain of unkown function (DUF1775) NM058_20085 PF00202 Aminotransferase class-III NM058_20090 PF00392 Bacterial regulatory proteins, gntR family NM058_20090 PF00155 Aminotransferase class I and II NM058_20095 PF01022 Bacterial regulatory protein, arsR family NM058_20100 PF03992 Antibiotic biosynthesis monooxygenase NM058_20105 PF00881 Nitroreductase family NM058_20110 PF00440 Bacterial regulatory proteins, tetR family NM058_20115 PF07690 Major Facilitator Superfamily NM058_20120 PF01497 Periplasmic binding protein NM058_20125 PF00005 ABC transporter NM058_20130 PF01032 FecCD transport family NM058_20135 PF01032 FecCD transport family NM058_20145 PF09680 Family of unknown function NM058_20150 PF11131 Rap-phr extracellular signalling NM058_20155 PF18801 response regulator aspartate phosphatase H, N terminal NM058_20160 PF00512 His Kinase A (phospho-acceptor) domain NM058_20160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_20160 PF00672 HAMP domain NM058_20175 PF00005 ABC transporter NM058_20185 PF05504 Spore germination B3/ GerAC like, C-terminal NM058_20200 PF12708 Pectate lyase superfamily protein NM058_20200 PF13229 Right handed beta helix region NM058_20205 PF00854 POT family NM058_20225 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NM058_20235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NM058_20235 PF03466 LysR substrate binding domain NM058_20240 PF00497 Bacterial extracellular solute-binding proteins, family 3 NM058_20245 PF00528 Binding-protein-dependent transport system inner membrane component NM058_20250 PF00005 ABC transporter NM058_20260 PF01648 4'-phosphopantetheinyl transferase superfamily NM058_20265 PF00155 Aminotransferase class I and II NM058_20265 PF00392 Bacterial regulatory proteins, gntR family NM058_20270 PF00892 EamA-like transporter family NM058_20275 PF14317 YcxB-like protein NM058_20295 PF13193 AMP-binding enzyme C-terminal domain NM058_20295 PF00668 Condensation domain NM058_20295 PF00550 Phosphopantetheine attachment site NM058_20295 PF00501 AMP-binding enzyme NM058_20300 PF00501 AMP-binding enzyme NM058_20300 PF00668 Condensation domain NM058_20300 PF00550 Phosphopantetheine attachment site NM058_20300 PF13193 AMP-binding enzyme C-terminal domain NM058_20310 PF17584 Bacillus competence protein S NM058_20320 PF00668 Condensation domain NM058_20320 PF00550 Phosphopantetheine attachment site NM058_20320 PF00501 AMP-binding enzyme NM058_20320 PF13193 AMP-binding enzyme C-terminal domain NM058_20325 PF13193 AMP-binding enzyme C-terminal domain NM058_20325 PF00668 Condensation domain NM058_20325 PF00501 AMP-binding enzyme NM058_20325 PF00550 Phosphopantetheine attachment site NM058_20330 PF00550 Phosphopantetheine attachment site NM058_20330 PF13193 AMP-binding enzyme C-terminal domain NM058_20330 PF00501 AMP-binding enzyme NM058_20330 PF00668 Condensation domain NM058_20335 PF00501 AMP-binding enzyme NM058_20335 PF00668 Condensation domain NM058_20335 PF00550 Phosphopantetheine attachment site NM058_20335 PF13193 AMP-binding enzyme C-terminal domain NM058_20340 PF00668 Condensation domain NM058_20340 PF00550 Phosphopantetheine attachment site NM058_20340 PF13193 AMP-binding enzyme C-terminal domain NM058_20340 PF00501 AMP-binding enzyme NM058_20345 PF01638 HxlR-like helix-turn-helix NM058_20350 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NM058_20355 PF01380 SIS domain NM058_20360 PF17202 Single cache domain 3 NM058_20360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NM058_20360 PF00672 HAMP domain NM058_20365 PF14040 Deoxyribonuclease NucA/NucB NM058_20370 PF11033 Competence protein J (ComJ) NM058_20375 PF00232 Glycosyl hydrolase family 1 NM058_20390 PF01047 MarR family NM058_20395 PF10925 Protein of unknown function (DUF2680) NM058_20410 PF00497 Bacterial extracellular solute-binding proteins, family 3 NM058_20415 PF00528 Binding-protein-dependent transport system inner membrane component NM058_20420 PF02492 CobW/HypB/UreG, nucleotide-binding domain NM058_20420 PF07683 Cobalamin synthesis protein cobW C-terminal domain NM058_20430 PF03734 L,D-transpeptidase catalytic domain NM058_20450 PF00384 Molybdopterin oxidoreductase NM058_20450 PF01568 Molydopterin dinucleotide binding domain NM058_20450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NM058_20460 PF00355 Rieske [2Fe-2S] domain NM058_20470 PF07992 Pyridine nucleotide-disulphide oxidoreductase NM058_20480 PF03773 Predicted permease NM058_20485 PF09323 Domain of unknown function (DUF1980) NM058_20490 PF17853 GGDEF-like domain NM058_20490 PF13556 PucR C-terminal helix-turn-helix domain NM058_20505 PF01619 Proline dehydrogenase NM058_20510 PF10127 RNA repair pathway DNA polymerase beta family NM058_20515 PF05448 Acetyl xylan esterase (AXE1) NM058_20520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NM058_20520 PF03466 LysR substrate binding domain NM058_20525 PF08241 Methyltransferase domain NM058_20530 PF01202 Shikimate kinase NM058_20540 PF02540 NAD synthase NM058_20550 PF00324 Amino acid permease NM058_20555 PF08892 YqcI/YcgG family NM058_20560 PF01810 LysE type translocator NM058_20565 PF01047 MarR family NM058_20570 PF07690 Major Facilitator Superfamily NM058_20585 PF00128 Alpha amylase, catalytic domain NM058_20585 PF16738 Starch-binding module 26 NM058_20595 PF03606 C4-dicarboxylate anaerobic carrier NM058_20600 PF07687 Peptidase dimerisation domain NM058_20600 PF01546 Peptidase family M20/M25/M40 NM058_20605 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NM058_20610 PF00528 Binding-protein-dependent transport system inner membrane component NM058_20615 PF00005 ABC transporter NM058_20615 PF00571 CBS domain NM058_20625 PF07690 Major Facilitator Superfamily NM058_20630 PF07690 Major Facilitator Superfamily NM058_20635 PF05816 Toxic anion resistance protein (TelA) NM058_20640 PF14266 Putative component of 'biosynthetic module' NM058_20645 PF03741 Integral membrane protein TerC family NM058_20650 PF02342 TerD domain NM058_20655 PF02342 TerD domain NM058_20660 PF02342 TerD domain NM058_20670 PF00950 ABC 3 transport family NM058_20680 PF01297 Zinc-uptake complex component A periplasmic NM058_20685 PF00128 Alpha amylase, catalytic domain NM058_20695 PF18801 response regulator aspartate phosphatase H, N terminal NM058_20705 PF16244 Domain of unknown function (DUF4901) NM058_20720 PF11611 Domain of unknown function (DUF4352) NM058_20720 PF17118 Domain of unknown function (DUF5105) NM058_20725 PF00248 Aldo/keto reductase family NM058_20730 PF12679 ABC-2 family transporter protein NM058_20735 PF00005 ABC transporter NM058_20740 PF04397 LytTr DNA-binding domain NM058_20740 PF00072 Response regulator receiver domain NM058_20745 PF14501 GHKL domain NM058_20750 PF05225 helix-turn-helix, Psq domain NM058_20750 PF02810 SEC-C motif NM058_20755 PF06271 RDD family NM058_20760 PF01674 Lipase (class 2) NM058_20770 PF00440 Bacterial regulatory proteins, tetR family NM058_20775 PF07690 Major Facilitator Superfamily NM058_20780 PF00266 Aminotransferase class-V NM058_20785 PF01470 Pyroglutamyl peptidase NM058_20790 PF00902 Sec-independent protein translocase protein (TatC) NM058_20795 PF02416 mttA/Hcf106 family NM058_20800 PF09423 PhoD-like phosphatase NM058_20800 PF16655 PhoD-like phosphatase, N-terminal domain NM058_20810 PF10138 vWA found in TerF C terminus NM058_20815 PF07486 Cell Wall Hydrolase NM058_20825 PF10710 Protein of unknown function (DUF2512) NM058_20840 PF00005 ABC transporter NM058_20845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NM058_20845 PF00512 His Kinase A (phospho-acceptor) domain NM058_20850 PF00072 Response regulator receiver domain NM058_20850 PF00486 Transcriptional regulatory protein, C terminal NM058_20860 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein NM058_20865 PF01636 Phosphotransferase enzyme family NM058_20875 PF00392 Bacterial regulatory proteins, gntR family NM058_20875 PF07729 FCD domain NM058_20885 PF07690 Major Facilitator Superfamily NM058_20890 PF00171 Aldehyde dehydrogenase family NM058_20895 PF00701 Dihydrodipicolinate synthetase family NM058_20910 PF04960 Glutaminase NM058_20915 PF01235 Sodium:alanine symporter family NM058_20925 PF00324 Amino acid permease NM058_20930 PF01063 Amino-transferase class IV NM058_20935 PF07853 Protein of unknown function (DUF1648) NM058_20940 PF07702 UTRA domain NM058_20940 PF00392 Bacterial regulatory proteins, gntR family NM058_20955 PF00375 Sodium:dicarboxylate symporter family NM058_20965 PF12833 Helix-turn-helix domain NM058_20970 PF05139 Erythromycin esterase NM058_20980 PF02666 Phosphatidylserine decarboxylase NM058_20985 PF09335 SNARE associated Golgi protein NM058_20990 PF01066 CDP-alcohol phosphatidyltransferase NM058_20995 PF12697 Alpha/beta hydrolase family NM058_21000 PF10794 Protein of unknown function (DUF2606) NM058_21005 PF00089 Trypsin NM058_21010 PF02222 ATP-grasp domain NM058_21015 PF02311 AraC-like ligand binding domain NM058_21015 PF12833 Helix-turn-helix domain NM058_21020 PF00892 EamA-like transporter family NM058_21035 PF07690 Major Facilitator Superfamily NM058_21040 PF01047 MarR family NM058_21040 PF00583 Acetyltransferase (GNAT) family NM058_21045 PF10852 Protein of unknown function (DUF2651) NM058_21055 PF03009 Glycerophosphoryl diester phosphodiesterase family NM058_21060 PF02690 Na+/Pi-cotransporter NM058_21080 PF00905 Penicillin binding protein transpeptidase domain NM058_21085 PF17340 Family of unknown function (DUF5370) NM058_21090 PF17334 Minor curli fiber component A NM058_21095 PF00324 Amino acid permease NM058_21100 PF16226 Domain of unknown function (DUF4885) NM058_21110 PF00069 Protein kinase domain NM058_21120 PF00672 HAMP domain NM058_21120 PF00512 His Kinase A (phospho-acceptor) domain NM058_21125 PF00072 Response regulator receiver domain NM058_21125 PF00486 Transcriptional regulatory protein, C terminal NM058_21135 PF00376 MerR family regulatory protein NM058_21135 PF09278 MerR, DNA binding NM058_21150 PF07690 Major Facilitator Superfamily NM058_21160 PF10057 Uncharacterized conserved protein (DUF2294) NM058_21180 PF00361 Proton-conducting membrane transporter NM058_21180 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NM058_21185 PF01380 SIS domain NM058_21195 PF07949 YbbR-like protein NM058_21200 PF02457 DisA bacterial checkpoint controller nucleotide-binding NM058_21205 PF13490 Putative zinc-finger NM058_21210 PF04542 Sigma-70 region 2 NM058_21210 PF08281 Sigma-70, region 4 NM058_21240 PF04463 Protein of unknown function (DUF523) NM058_21250 PF01380 SIS domain NM058_21255 PF01418 Helix-turn-helix domain, rpiR family NM058_21255 PF01380 SIS domain NM058_21265 PF00144 Beta-lactamase NM058_21280 PF01497 Periplasmic binding protein NM058_21280 PF12833 Helix-turn-helix domain NM058_21305 PF01032 FecCD transport family NM058_21310 PF00756 Putative esterase NM058_21315 PF01758 Sodium Bile acid symporter family NM058_21325 PF08240 Alcohol dehydrogenase GroES-like domain NM058_21325 PF00107 Zinc-binding dehydrogenase NM058_21335 PF00202 Aminotransferase class-III NM058_21340 PF07690 Major Facilitator Superfamily NM058_21420 PF01522 Polysaccharide deacetylase NM058_21425 PF14089 KinB-signalling pathway activation in sporulation NM058_21435 PF10609 NUBPL iron-transfer P-loop NTPase NM058_21440 PF01520 N-acetylmuramoyl-L-alanine amidase NM058_21445 PF10730 Protein of unknown function (DUF2521) NM058_21450 PF08241 Methyltransferase domain NM058_21455 PF00380 Ribosomal protein S9/S16 NM058_21470 PF02361 Cobalt transport protein NM058_21475 PF00005 ABC transporter NM058_21480 PF00005 ABC transporter NM058_21485 PF01196 Ribosomal protein L17 NM058_21490 PF01196 Ribosomal protein L17 NM058_21495 PF01000 RNA polymerase Rpb3/RpoA insert domain NM058_21495 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NM058_21495 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NM058_21500 PF00411 Ribosomal protein S11 NM058_21505 PF00416 Ribosomal protein S13/S18 NM058_21510 PF00444 Ribosomal protein L36 NM058_21515 PF01176 Translation initiation factor 1A / IF-1 NM058_21520 PF00557 Metallopeptidase family M24 NM058_21525 PF05191 Adenylate kinase, active site lid NM058_21530 PF00344 SecY translocase NM058_21535 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NM058_21540 PF00327 Ribosomal protein L30p/L7e NM058_21545 PF00333 Ribosomal protein S5, N-terminal domain NM058_21545 PF03719 Ribosomal protein S5, C-terminal domain NM058_21550 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NM058_21555 PF00347 Ribosomal protein L6 NM058_21560 PF00410 Ribosomal protein S8 NM058_21565 PF00253 Ribosomal protein S14p/S29e NM058_21570 PF00281 Ribosomal protein L5 NM058_21570 PF00673 ribosomal L5P family C-terminus NM058_21575 PF00467 KOW motif NM058_21575 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NM058_21580 PF00238 Ribosomal protein L14p/L23e NM058_21585 PF00366 Ribosomal protein S17 NM058_21590 PF00831 Ribosomal L29 protein NM058_21595 PF00252 Ribosomal protein L16p/L10e NM058_21605 PF00237 Ribosomal protein L22p/L17e NM058_21610 PF00203 Ribosomal protein S19 NM058_21615 PF00181 Ribosomal Proteins L2, RNA binding domain NM058_21615 PF03947 Ribosomal Proteins L2, C-terminal domain NM058_21620 PF00276 Ribosomal protein L23 NM058_21625 PF00573 Ribosomal protein L4/L1 family NM058_21630 PF00297 Ribosomal protein L3 NM058_21635 PF00338 Ribosomal protein S10p/S20e NM058_21645 PF00009 Elongation factor Tu GTP binding domain NM058_21645 PF03144 Elongation factor Tu domain 2 NM058_21645 PF03143 Elongation factor Tu C-terminal domain NM058_21650 PF03144 Elongation factor Tu domain 2 NM058_21650 PF00009 Elongation factor Tu GTP binding domain NM058_21650 PF00679 Elongation factor G C-terminus NM058_21650 PF14492 Elongation Factor G, domain II NM058_21650 PF03764 Elongation factor G, domain IV NM058_21655 PF00177 Ribosomal protein S7p/S5e NM058_21660 PF00164 Ribosomal protein S12/S23 NM058_21665 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family NM058_21675 PF00562 RNA polymerase Rpb2, domain 6 NM058_21675 PF10385 RNA polymerase beta subunit external 1 domain NM058_21675 PF04560 RNA polymerase Rpb2, domain 7 NM058_21675 PF04561 RNA polymerase Rpb2, domain 2 NM058_21675 PF04563 RNA polymerase beta subunit NM058_21675 PF04565 RNA polymerase Rpb2, domain 3 NM058_21685 PF00542 Ribosomal protein L7/L12 C-terminal domain NM058_21685 PF16320 Ribosomal protein L7/L12 dimerisation domain NM058_21690 PF00466 Ribosomal protein L10 NM058_21695 PF00687 Ribosomal protein L1p/L10e family NM058_21700 PF00298 Ribosomal protein L11, RNA binding domain NM058_21700 PF03946 Ribosomal protein L11, N-terminal domain NM058_21705 PF00467 KOW motif NM058_21705 PF02357 Transcription termination factor nusG NM058_21710 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NM058_21715 PF00471 Ribosomal protein L33 NM058_21720 PF04542 Sigma-70 region 2 NM058_21720 PF08281 Sigma-70, region 4 NM058_21735 PF00636 Ribonuclease III domain NM058_21740 PF09190 DALR domain NM058_21740 PF01406 tRNA synthetases class I (C) catalytic domain NM058_21750 PF00749 tRNA synthetases class I (E and Q), catalytic domain NM058_21755 PF02542 YgbB family NM058_21760 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NM058_21770 PF02457 DisA bacterial checkpoint controller nucleotide-binding NM058_21770 PF10635 DisA bacterial checkpoint controller linker region NM058_21785 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain NM058_21790 PF02151 UvrB/uvrC motif NM058_21795 PF05848 CtsR N-terminal HTH domain NM058_21795 PF17727 CtsR C-terminal dimerization domain