##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2439727v1 #!genome-build-accession NCBI_Assembly:GCA_024397275.1 #!annotation-date 07/18/2022 16:02:04 #!annotation-source NCBI ##sequence-region CP101611.1 1 4240317 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=483913 CP101611.1 Genbank region 1 4240317 . + . ID=CP101611.1:1..4240317;Dbxref=taxon:483913;Is_circular=true;Name=ANONYMOUS;collection-date=2017-11-27;country=South Korea;gbkey=Src;genome=chromosome;isolation-source=soil;mol_type=genomic DNA;strain=1HC-NA CP101611.1 Genbank gene 11 126 . - . ID=gene-NM058_00005;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NM058_00005 CP101611.1 cmsearch rRNA 11 126 . - . ID=rna-NM058_00005;Parent=gene-NM058_00005;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00005;product=5S ribosomal RNA CP101611.1 cmsearch exon 11 126 . - . ID=exon-NM058_00005-1;Parent=rna-NM058_00005;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00005;product=5S ribosomal RNA CP101611.1 Genbank gene 181 3108 . - . ID=gene-NM058_00010;Name=NM058_00010;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_00010 CP101611.1 cmsearch rRNA 181 3108 . - . ID=rna-NM058_00010;Parent=gene-NM058_00010;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00010;product=23S ribosomal RNA CP101611.1 cmsearch exon 181 3108 . - . ID=exon-NM058_00010-1;Parent=rna-NM058_00010;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00010;product=23S ribosomal RNA CP101611.1 Genbank gene 3278 4827 . - . ID=gene-NM058_00015;Name=NM058_00015;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_00015 CP101611.1 cmsearch rRNA 3278 4827 . - . ID=rna-NM058_00015;Parent=gene-NM058_00015;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00015;product=16S ribosomal RNA CP101611.1 cmsearch exon 3278 4827 . - . ID=exon-NM058_00015-1;Parent=rna-NM058_00015;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00015;product=16S ribosomal RNA CP101611.1 Genbank gene 5002 5077 . - . ID=gene-NM058_00020;Name=NM058_00020;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00020 CP101611.1 tRNAscan-SE tRNA 5002 5077 . - . ID=rna-NM058_00020;Parent=gene-NM058_00020;anticodon=(pos:complement(5042..5044));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00020;product=tRNA-Ala CP101611.1 tRNAscan-SE exon 5002 5077 . - . ID=exon-NM058_00020-1;Parent=rna-NM058_00020;anticodon=(pos:complement(5042..5044));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00020;product=tRNA-Ala CP101611.1 Genbank gene 5085 5161 . - . ID=gene-NM058_00025;Name=NM058_00025;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00025 CP101611.1 tRNAscan-SE tRNA 5085 5161 . - . ID=rna-NM058_00025;Parent=gene-NM058_00025;anticodon=(pos:complement(5125..5127));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00025;product=tRNA-Pro CP101611.1 tRNAscan-SE exon 5085 5161 . - . ID=exon-NM058_00025-1;Parent=rna-NM058_00025;anticodon=(pos:complement(5125..5127));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00025;product=tRNA-Pro CP101611.1 Genbank gene 5188 5264 . - . ID=gene-NM058_00030;Name=NM058_00030;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00030 CP101611.1 tRNAscan-SE tRNA 5188 5264 . - . ID=rna-NM058_00030;Parent=gene-NM058_00030;anticodon=(pos:complement(5228..5230));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00030;product=tRNA-Arg CP101611.1 tRNAscan-SE exon 5188 5264 . - . ID=exon-NM058_00030-1;Parent=rna-NM058_00030;anticodon=(pos:complement(5228..5230));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00030;product=tRNA-Arg CP101611.1 Genbank gene 5274 5359 . - . ID=gene-NM058_00035;Name=NM058_00035;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00035 CP101611.1 tRNAscan-SE tRNA 5274 5359 . - . ID=rna-NM058_00035;Parent=gene-NM058_00035;anticodon=(pos:complement(5323..5325));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00035;product=tRNA-Leu CP101611.1 tRNAscan-SE exon 5274 5359 . - . ID=exon-NM058_00035-1;Parent=rna-NM058_00035;anticodon=(pos:complement(5323..5325));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00035;product=tRNA-Leu CP101611.1 Genbank gene 5374 5448 . - . ID=gene-NM058_00040;Name=NM058_00040;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00040 CP101611.1 tRNAscan-SE tRNA 5374 5448 . - . ID=rna-NM058_00040;Parent=gene-NM058_00040;anticodon=(pos:complement(5414..5416));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00040;product=tRNA-Gly CP101611.1 tRNAscan-SE exon 5374 5448 . - . ID=exon-NM058_00040-1;Parent=rna-NM058_00040;anticodon=(pos:complement(5414..5416));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00040;product=tRNA-Gly CP101611.1 Genbank gene 5489 5571 . - . ID=gene-NM058_00045;Name=NM058_00045;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00045 CP101611.1 tRNAscan-SE tRNA 5489 5571 . - . ID=rna-NM058_00045;Parent=gene-NM058_00045;anticodon=(pos:complement(5535..5537));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00045;product=tRNA-Leu CP101611.1 tRNAscan-SE exon 5489 5571 . - . ID=exon-NM058_00045-1;Parent=rna-NM058_00045;anticodon=(pos:complement(5535..5537));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00045;product=tRNA-Leu CP101611.1 Genbank gene 5579 5654 . - . ID=gene-NM058_00050;Name=NM058_00050;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00050 CP101611.1 tRNAscan-SE tRNA 5579 5654 . - . ID=rna-NM058_00050;Parent=gene-NM058_00050;anticodon=(pos:complement(5619..5621));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00050;product=tRNA-Lys CP101611.1 tRNAscan-SE exon 5579 5654 . - . ID=exon-NM058_00050-1;Parent=rna-NM058_00050;anticodon=(pos:complement(5619..5621));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00050;product=tRNA-Lys CP101611.1 Genbank gene 5692 5767 . - . ID=gene-NM058_00055;Name=NM058_00055;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00055 CP101611.1 tRNAscan-SE tRNA 5692 5767 . - . ID=rna-NM058_00055;Parent=gene-NM058_00055;anticodon=(pos:complement(5732..5734));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00055;product=tRNA-Thr CP101611.1 tRNAscan-SE exon 5692 5767 . - . ID=exon-NM058_00055-1;Parent=rna-NM058_00055;anticodon=(pos:complement(5732..5734));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00055;product=tRNA-Thr CP101611.1 Genbank gene 5772 5847 . - . ID=gene-NM058_00060;Name=NM058_00060;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00060 CP101611.1 tRNAscan-SE tRNA 5772 5847 . - . ID=rna-NM058_00060;Parent=gene-NM058_00060;anticodon=(pos:complement(5812..5814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00060;product=tRNA-Val CP101611.1 tRNAscan-SE exon 5772 5847 . - . ID=exon-NM058_00060-1;Parent=rna-NM058_00060;anticodon=(pos:complement(5812..5814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00060;product=tRNA-Val CP101611.1 Genbank gene 5870 5985 . - . ID=gene-NM058_00065;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NM058_00065 CP101611.1 cmsearch rRNA 5870 5985 . - . ID=rna-NM058_00065;Parent=gene-NM058_00065;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00065;product=5S ribosomal RNA CP101611.1 cmsearch exon 5870 5985 . - . ID=exon-NM058_00065-1;Parent=rna-NM058_00065;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00065;product=5S ribosomal RNA CP101611.1 Genbank gene 6040 8967 . - . ID=gene-NM058_00070;Name=NM058_00070;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_00070 CP101611.1 cmsearch rRNA 6040 8967 . - . ID=rna-NM058_00070;Parent=gene-NM058_00070;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00070;product=23S ribosomal RNA CP101611.1 cmsearch exon 6040 8967 . - . ID=exon-NM058_00070-1;Parent=rna-NM058_00070;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00070;product=23S ribosomal RNA CP101611.1 Genbank gene 9137 10686 . - . ID=gene-NM058_00075;Name=NM058_00075;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_00075 CP101611.1 cmsearch rRNA 9137 10686 . - . ID=rna-NM058_00075;Parent=gene-NM058_00075;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00075;product=16S ribosomal RNA CP101611.1 cmsearch exon 9137 10686 . - . ID=exon-NM058_00075-1;Parent=rna-NM058_00075;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00075;product=16S ribosomal RNA CP101611.1 Genbank pseudogene 10999 12497 . - . ID=gene-NM058_00080;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=pseudogene;locus_tag=NM058_00080;pseudo=true CP101611.1 Protein Homology CDS 10999 12497 . - 0 ID=cds-NM058_00080;Parent=gene-NM058_00080;Note=frameshifted;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387963.1;locus_tag=NM058_00080;product=lysine--tRNA ligase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 12589 13590 . - . ID=gene-NM058_00085;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=NM058_00085 CP101611.1 Protein Homology CDS 12589 13590 . - 0 ID=cds-UTX05306.1;Parent=gene-NM058_00085;Dbxref=NCBI_GP:UTX05306.1;Name=UTX05306.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387962.1;locus_tag=NM058_00085;product=tRNA dihydrouridine synthase DusB;protein_id=UTX05306.1;transl_table=11 CP101611.1 Genbank gene 13603 13821 . - . ID=gene-NM058_00090;Name=NM058_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00090 CP101611.1 Protein Homology CDS 13603 13821 . - 0 ID=cds-UTX05307.1;Parent=gene-NM058_00090;Dbxref=NCBI_GP:UTX05307.1;Name=UTX05307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003218406.1;locus_tag=NM058_00090;product=helix-turn-helix transcriptional regulator;protein_id=UTX05307.1;transl_table=11 CP101611.1 Genbank gene 13773 14276 . - . ID=gene-NM058_00095;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=NM058_00095 CP101611.1 Protein Homology CDS 13773 14276 . - 0 ID=cds-UTX05308.1;Parent=gene-NM058_00095;Dbxref=NCBI_GP:UTX05308.1;Name=UTX05308.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387960.1;locus_tag=NM058_00095;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=UTX05308.1;transl_table=11 CP101611.1 Genbank gene 14273 14635 . - . ID=gene-NM058_00100;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=NM058_00100 CP101611.1 Protein Homology CDS 14273 14635 . - 0 ID=cds-UTX05309.1;Parent=gene-NM058_00100;Dbxref=NCBI_GP:UTX05309.1;Name=UTX05309.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387959.1;locus_tag=NM058_00100;product=dihydroneopterin aldolase;protein_id=UTX05309.1;transl_table=11 CP101611.1 Genbank gene 14628 15485 . - . ID=gene-NM058_00105;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=NM058_00105 CP101611.1 Protein Homology CDS 14628 15485 . - 0 ID=cds-UTX05310.1;Parent=gene-NM058_00105;Dbxref=NCBI_GP:UTX05310.1;Name=UTX05310.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387958.1;locus_tag=NM058_00105;product=dihydropteroate synthase;protein_id=UTX05310.1;transl_table=11 CP101611.1 Genbank pseudogene 15467 16345 . - . ID=gene-NM058_00110;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=pseudogene;locus_tag=NM058_00110;pseudo=true CP101611.1 Protein Homology CDS 15467 16345 . - 0 ID=cds-NM058_00110;Parent=gene-NM058_00110;Note=frameshifted;Ontology_term=GO:0003824;gbkey=CDS;gene=pabC;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387957.1;locus_tag=NM058_00110;product=aminodeoxychorismate lyase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 16345 16929 . - . ID=gene-NM058_00115;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=NM058_00115 CP101611.1 Protein Homology CDS 16345 16929 . - 0 ID=cds-UTX05311.1;Parent=gene-NM058_00115;Dbxref=NCBI_GP:UTX05311.1;Name=UTX05311.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387956.1;locus_tag=NM058_00115;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=UTX05311.1;transl_table=11 CP101611.1 Genbank pseudogene 16943 18354 . - . ID=gene-NM058_00120;Name=NM058_00120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_00120;pseudo=true CP101611.1 Protein Homology CDS 16943 18354 . - 0 ID=cds-NM058_00120;Parent=gene-NM058_00120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387955.1;locus_tag=NM058_00120;product=anthranilate synthase component I family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 18518 19444 . - . ID=gene-NM058_00125;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=NM058_00125 CP101611.1 Protein Homology CDS 18518 19444 . - 0 ID=cds-UTX05312.1;Parent=gene-NM058_00125;Dbxref=NCBI_GP:UTX05312.1;Name=UTX05312.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387954.1;locus_tag=NM058_00125;product=cysteine synthase A;protein_id=UTX05312.1;transl_table=11 CP101611.1 Genbank gene 19520 20413 . - . ID=gene-NM058_00130;Name=NM058_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00130 CP101611.1 Protein Homology CDS 19520 20413 . - 0 ID=cds-UTX05313.1;Parent=gene-NM058_00130;Dbxref=NCBI_GP:UTX05313.1;Name=UTX05313.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387953.1;locus_tag=NM058_00130;product=peptidyl-prolyl cis-trans isomerase;protein_id=UTX05313.1;transl_table=11 CP101611.1 Genbank gene 20462 21337 . - . ID=gene-NM058_00135;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=NM058_00135 CP101611.1 Protein Homology CDS 20462 21337 . - 0 ID=cds-UTX05314.1;Parent=gene-NM058_00135;Dbxref=NCBI_GP:UTX05314.1;Name=UTX05314.1;gbkey=CDS;gene=hslO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387952.1;locus_tag=NM058_00135;product=redox-regulated molecular chaperone HslO;protein_id=UTX05314.1;transl_table=11 CP101611.1 Genbank gene 21349 22125 . - . ID=gene-NM058_00140;Name=NM058_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00140 CP101611.1 Protein Homology CDS 21349 22125 . - 0 ID=cds-UTX05315.1;Parent=gene-NM058_00140;Dbxref=NCBI_GP:UTX05315.1;Name=UTX05315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387951.2;locus_tag=NM058_00140;product=type III pantothenate kinase;protein_id=UTX05315.1;transl_table=11 CP101611.1 Genbank pseudogene 22316 24230 . - . ID=gene-NM058_00145;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=pseudogene;locus_tag=NM058_00145;pseudo=true CP101611.1 Protein Homology CDS 22316 24230 . - 0 ID=cds-NM058_00145;Parent=gene-NM058_00145;Note=frameshifted;gbkey=CDS;gene=ftsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387950.1;locus_tag=NM058_00145;product=ATP-dependent zinc metalloprotease FtsH;pseudo=true;transl_table=11 CP101611.1 Genbank gene 24328 24870 . - . ID=gene-NM058_00150;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=NM058_00150 CP101611.1 Protein Homology CDS 24328 24870 . - 0 ID=cds-UTX05316.1;Parent=gene-NM058_00150;Dbxref=NCBI_GP:UTX05316.1;Name=UTX05316.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387949.1;locus_tag=NM058_00150;product=hypoxanthine phosphoribosyltransferase;protein_id=UTX05316.1;transl_table=11 CP101611.1 Genbank gene 24867 26285 . - . ID=gene-NM058_00155;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=NM058_00155 CP101611.1 Protein Homology CDS 24867 26285 . - 0 ID=cds-UTX05317.1;Parent=gene-NM058_00155;Dbxref=NCBI_GP:UTX05317.1;Name=UTX05317.1;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387948.1;locus_tag=NM058_00155;product=tRNA lysidine(34) synthetase TilS;protein_id=UTX05317.1;transl_table=11 CP101611.1 Genbank pseudogene 26389 27404 . - . ID=gene-NM058_00160;Name=prkT;gbkey=Gene;gene=prkT;gene_biotype=pseudogene;gene_synonym=yabT;locus_tag=NM058_00160;pseudo=true CP101611.1 Protein Homology CDS 26389 27404 . - 0 ID=cds-NM058_00160;Parent=gene-NM058_00160;Note=frameshifted;gbkey=CDS;gene=prkT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387947.2;locus_tag=NM058_00160;product=serine/threonine protein kinase PrkT;pseudo=true;transl_table=11 CP101611.1 Genbank gene 27370 28107 . - . ID=gene-NM058_00165;Name=NM058_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00165 CP101611.1 Protein Homology CDS 27370 28107 . - 0 ID=cds-UTX05318.1;Parent=gene-NM058_00165;Dbxref=NCBI_GP:UTX05318.1;Name=UTX05318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387946.1;locus_tag=NM058_00165;product=VWA domain-containing protein;protein_id=UTX05318.1;transl_table=11 CP101611.1 Genbank gene 28192 30672 . - . ID=gene-NM058_00170;Name=spoIIE;gbkey=Gene;gene=spoIIE;gene_biotype=protein_coding;locus_tag=NM058_00170 CP101611.1 Protein Homology CDS 28192 30672 . - 0 ID=cds-UTX05319.1;Parent=gene-NM058_00170;Dbxref=NCBI_GP:UTX05319.1;Name=UTX05319.1;Ontology_term=GO:0030436,GO:0004722,GO:0016020;gbkey=CDS;gene=spoIIE;go_component=membrane|0016020||IEA;go_function=protein serine/threonine phosphatase activity|0004722||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387945.1;locus_tag=NM058_00170;product=stage II sporulation protein E;protein_id=UTX05319.1;transl_table=11 CP101611.1 Genbank gene 30872 30943 . - . ID=gene-NM058_00175;Name=NM058_00175;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00175 CP101611.1 tRNAscan-SE tRNA 30872 30943 . - . ID=rna-NM058_00175;Parent=gene-NM058_00175;anticodon=(pos:complement(30908..30910));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00175;product=tRNA-Glu CP101611.1 tRNAscan-SE exon 30872 30943 . - . ID=exon-NM058_00175-1;Parent=rna-NM058_00175;anticodon=(pos:complement(30908..30910));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00175;product=tRNA-Glu CP101611.1 Genbank gene 30953 31029 . - . ID=gene-NM058_00180;Name=NM058_00180;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00180 CP101611.1 tRNAscan-SE tRNA 30953 31029 . - . ID=rna-NM058_00180;Parent=gene-NM058_00180;anticodon=(pos:complement(30993..30995));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00180;product=tRNA-Met CP101611.1 tRNAscan-SE exon 30953 31029 . - . ID=exon-NM058_00180-1;Parent=rna-NM058_00180;anticodon=(pos:complement(30993..30995));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00180;product=tRNA-Met CP101611.1 Genbank gene 31198 31584 . - . ID=gene-NM058_00185;Name=NM058_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00185 CP101611.1 Protein Homology CDS 31198 31584 . - 0 ID=cds-UTX05320.1;Parent=gene-NM058_00185;Dbxref=NCBI_GP:UTX05320.1;Name=UTX05320.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387944.1;locus_tag=NM058_00185;product=S1 domain-containing RNA-binding protein;protein_id=UTX05320.1;transl_table=11 CP101611.1 Genbank gene 31665 32042 . - . ID=gene-NM058_00190;Name=divIC;gbkey=Gene;gene=divIC;gene_biotype=protein_coding;locus_tag=NM058_00190 CP101611.1 Protein Homology CDS 31665 32042 . - 0 ID=cds-UTX05321.1;Parent=gene-NM058_00190;Dbxref=NCBI_GP:UTX05321.1;Name=UTX05321.1;gbkey=CDS;gene=divIC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387943.1;locus_tag=NM058_00190;product=cell division protein DivIC;protein_id=UTX05321.1;transl_table=11 CP101611.1 Genbank gene 32060 32695 . - . ID=gene-NM058_00195;Name=yabQ;gbkey=Gene;gene=yabQ;gene_biotype=protein_coding;locus_tag=NM058_00195 CP101611.1 Protein Homology CDS 32060 32695 . - 0 ID=cds-UTX05322.1;Parent=gene-NM058_00195;Dbxref=NCBI_GP:UTX05322.1;Name=UTX05322.1;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=yabQ;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387942.1;locus_tag=NM058_00195;product=spore cortex biosynthesis protein YabQ;protein_id=UTX05322.1;transl_table=11 CP101611.1 Genbank gene 32692 32994 . - . ID=gene-NM058_00200;Name=yabP;gbkey=Gene;gene=yabP;gene_biotype=protein_coding;locus_tag=NM058_00200 CP101611.1 Protein Homology CDS 32692 32994 . - 0 ID=cds-UTX05323.1;Parent=gene-NM058_00200;Dbxref=NCBI_GP:UTX05323.1;Name=UTX05323.1;Ontology_term=GO:0030436,GO:0003674,GO:0005575;gbkey=CDS;gene=yabP;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387941.1;locus_tag=NM058_00200;product=sporulation protein YabP;protein_id=UTX05323.1;transl_table=11 CP101611.1 Genbank gene 33073 33333 . - . ID=gene-NM058_00205;Name=NM058_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00205 CP101611.1 Protein Homology CDS 33073 33333 . - 0 ID=cds-UTX05324.1;Parent=gene-NM058_00205;Dbxref=NCBI_GP:UTX05324.1;Name=UTX05324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387940.1;locus_tag=NM058_00205;product=RNA-binding S4 domain-containing protein;protein_id=UTX05324.1;transl_table=11 CP101611.1 Genbank pseudogene 33336 34804 . - . ID=gene-NM058_00210;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=pseudogene;locus_tag=NM058_00210;pseudo=true CP101611.1 Protein Homology CDS 33336 34804 . - 0 ID=cds-NM058_00210;Parent=gene-NM058_00210;Note=frameshifted;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387939.1;locus_tag=NM058_00210;product=nucleoside triphosphate pyrophosphohydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 34794 36392 . - . ID=gene-NM058_00215;Name=NM058_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00215 CP101611.1 Protein Homology CDS 34794 36392 . - 0 ID=cds-UTX05325.1;Parent=gene-NM058_00215;Dbxref=NCBI_GP:UTX05325.1;Name=UTX05325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387938.1;locus_tag=NM058_00215;product=polysaccharide biosynthesis protein;protein_id=UTX05325.1;transl_table=11 CP101611.1 Genbank gene 36575 37111 . - . ID=gene-NM058_00220;Name=spoVT;gbkey=Gene;gene=spoVT;gene_biotype=protein_coding;locus_tag=NM058_00220 CP101611.1 Protein Homology CDS 36575 37111 . - 0 ID=cds-UTX05326.1;Parent=gene-NM058_00220;Dbxref=NCBI_GP:UTX05326.1;Name=UTX05326.1;Ontology_term=GO:0006355,GO:0030436,GO:0003700;gbkey=CDS;gene=spoVT;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA,asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387937.1;locus_tag=NM058_00220;product=stage V sporulation protein T;protein_id=UTX05326.1;transl_table=11 CP101611.1 Genbank pseudogene 37248 40780 . - . ID=gene-NM058_00225;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=pseudogene;locus_tag=NM058_00225;pseudo=true CP101611.1 Protein Homology CDS 37248 40780 . - 0 ID=cds-NM058_00225;Parent=gene-NM058_00225;Note=frameshifted;Ontology_term=GO:0006281,GO:0003690,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=mfd;go_function=double-stranded DNA binding|0003690||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387936.1;locus_tag=NM058_00225;product=transcription-repair coupling factor;pseudo=true;transl_table=11 CP101611.1 Genbank gene 40850 41080 . - . ID=gene-NM058_00230;Name=fin;gbkey=Gene;gene=fin;gene_biotype=protein_coding;locus_tag=NM058_00230 CP101611.1 Protein Homology CDS 40850 41080 . - 0 ID=cds-UTX05327.1;Parent=gene-NM058_00230;Dbxref=NCBI_GP:UTX05327.1;Name=UTX05327.1;gbkey=CDS;gene=fin;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387935.1;locus_tag=NM058_00230;product=anti-sigma-F factor Fin;protein_id=UTX05327.1;transl_table=11 CP101611.1 Genbank pseudogene 41140 41705 . - . ID=gene-NM058_00235;Name=pth;gbkey=Gene;gene=pth;gene_biotype=pseudogene;locus_tag=NM058_00235;pseudo=true CP101611.1 Protein Homology CDS 41140 41705 . - 0 ID=cds-NM058_00235;Parent=gene-NM058_00235;Note=frameshifted;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387934.1;locus_tag=NM058_00235;product=aminoacyl-tRNA hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 41812 42429 . - . ID=gene-NM058_00240;Name=NM058_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00240 CP101611.1 Protein Homology CDS 41812 42429 . - 0 ID=cds-UTX05328.1;Parent=gene-NM058_00240;Dbxref=NCBI_GP:UTX05328.1;Name=UTX05328.1;Ontology_term=GO:0006412,GO:0003735,GO:0008097,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003242128.1;locus_tag=NM058_00240;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=UTX05328.1;transl_table=11 CP101611.1 Genbank gene 42513 43466 . - . ID=gene-NM058_00245;Name=NM058_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00245 CP101611.1 Protein Homology CDS 42513 43466 . - 0 ID=cds-UTX05329.1;Parent=gene-NM058_00245;Dbxref=NCBI_GP:UTX05329.1;Name=UTX05329.1;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387932.1;locus_tag=NM058_00245;product=ribose-phosphate diphosphokinase;protein_id=UTX05329.1;transl_table=11 CP101611.1 Genbank pseudogene 43489 44858 . - . ID=gene-NM058_00250;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=pseudogene;locus_tag=NM058_00250;pseudo=true CP101611.1 Protein Homology CDS 43489 44858 . - 0 ID=cds-NM058_00250;Parent=gene-NM058_00250;Note=frameshifted;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387931.1;locus_tag=NM058_00250;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;pseudo=true;transl_table=11 CP101611.1 Genbank gene 45051 45344 . - . ID=gene-NM058_00255;Name=spoVG;gbkey=Gene;gene=spoVG;gene_biotype=protein_coding;locus_tag=NM058_00255 CP101611.1 Protein Homology CDS 45051 45344 . - 0 ID=cds-UTX05330.1;Parent=gene-NM058_00255;Dbxref=NCBI_GP:UTX05330.1;Name=UTX05330.1;Ontology_term=GO:0030435;gbkey=CDS;gene=spoVG;go_process=sporulation resulting in formation of a cellular spore|0030435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000454041.1;locus_tag=NM058_00255;product=septation regulator SpoVG;protein_id=UTX05330.1;transl_table=11 CP101611.1 Genbank gene 45540 45917 . - . ID=gene-NM058_00260;Name=NM058_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00260 CP101611.1 Protein Homology CDS 45540 45917 . - 0 ID=cds-UTX05331.1;Parent=gene-NM058_00260;Dbxref=NCBI_GP:UTX05331.1;Name=UTX05331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387929.1;locus_tag=NM058_00260;product=RidA family protein;protein_id=UTX05331.1;transl_table=11 CP101611.1 Genbank gene 45914 46771 . - . ID=gene-NM058_00265;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=NM058_00265 CP101611.1 Protein Homology CDS 45914 46771 . - 0 ID=cds-UTX05332.1;Parent=gene-NM058_00265;Dbxref=NCBI_GP:UTX05332.1;Name=UTX05332.1;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of transcription%2C DNA-templated|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387928.1;locus_tag=NM058_00265;product=pur operon repressor;protein_id=UTX05332.1;transl_table=11 CP101611.1 Genbank gene 46827 47696 . - . ID=gene-NM058_00270;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=NM058_00270 CP101611.1 Protein Homology CDS 46827 47696 . - 0 ID=cds-UTX06927.1;Parent=gene-NM058_00270;Dbxref=NCBI_GP:UTX06927.1;Name=UTX06927.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387927.1;locus_tag=NM058_00270;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=UTX06927.1;transl_table=11 CP101611.1 Genbank gene 47844 48029 . - . ID=gene-NM058_00275;Name=NM058_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00275 CP101611.1 Protein Homology CDS 47844 48029 . - 0 ID=cds-UTX05333.1;Parent=gene-NM058_00275;Dbxref=NCBI_GP:UTX05333.1;Name=UTX05333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387926.1;locus_tag=NM058_00275;product=alpha/beta-type small acid-soluble spore protein;protein_id=UTX05333.1;transl_table=11 CP101611.1 Genbank gene 48191 48451 . - . ID=gene-NM058_00280;Name=NM058_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00280 CP101611.1 Protein Homology CDS 48191 48451 . - 0 ID=cds-UTX05334.1;Parent=gene-NM058_00280;Dbxref=NCBI_GP:UTX05334.1;Name=UTX05334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387925.1;locus_tag=NM058_00280;product=Veg family protein;protein_id=UTX05334.1;transl_table=11 CP101611.1 Genbank gene 48662 49534 . - . ID=gene-NM058_00285;Name=prtG;gbkey=Gene;gene=prtG;gene_biotype=protein_coding;gene_synonym=yabG;locus_tag=NM058_00285 CP101611.1 Protein Homology CDS 48662 49534 . - 0 ID=cds-UTX05335.1;Parent=gene-NM058_00285;Dbxref=NCBI_GP:UTX05335.1;Name=UTX05335.1;gbkey=CDS;gene=prtG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387924.1;locus_tag=NM058_00285;product=sporulation-specific protease PrtG;protein_id=UTX05335.1;transl_table=11 CP101611.1 Genbank gene 49695 50573 . - . ID=gene-NM058_00290;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=NM058_00290 CP101611.1 Protein Homology CDS 49695 50573 . - 0 ID=cds-UTX05336.1;Parent=gene-NM058_00290;Dbxref=NCBI_GP:UTX05336.1;Name=UTX05336.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387923.1;locus_tag=NM058_00290;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=UTX05336.1;transl_table=11 CP101611.1 Genbank gene 50566 51126 . - . ID=gene-NM058_00295;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=NM058_00295 CP101611.1 Protein Homology CDS 50566 51126 . - 0 ID=cds-UTX05337.1;Parent=gene-NM058_00295;Dbxref=NCBI_GP:UTX05337.1;Name=UTX05337.1;gbkey=CDS;gene=rnmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387922.1;locus_tag=NM058_00295;product=ribonuclease M5;protein_id=UTX05337.1;transl_table=11 CP101611.1 Genbank gene 51271 52584 . - . ID=gene-NM058_00300;Name=NM058_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00300 CP101611.1 Protein Homology CDS 51271 52584 . - 0 ID=cds-UTX05338.1;Parent=gene-NM058_00300;Dbxref=NCBI_GP:UTX05338.1;Name=UTX05338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387921.1;locus_tag=NM058_00300;product=ubiquitin-like domain-containing protein;protein_id=UTX05338.1;transl_table=11 CP101611.1 Genbank gene 52740 53507 . - . ID=gene-NM058_00305;Name=NM058_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00305 CP101611.1 Protein Homology CDS 52740 53507 . - 0 ID=cds-UTX05339.1;Parent=gene-NM058_00305;Dbxref=NCBI_GP:UTX05339.1;Name=UTX05339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387920.1;locus_tag=NM058_00305;product=TatD family hydrolase;protein_id=UTX05339.1;transl_table=11 CP101611.1 Genbank gene 53586 55580 . - . ID=gene-NM058_00310;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=NM058_00310 CP101611.1 Protein Homology CDS 53586 55580 . - 0 ID=cds-UTX05340.1;Parent=gene-NM058_00310;Dbxref=NCBI_GP:UTX05340.1;Name=UTX05340.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387919.1;locus_tag=NM058_00310;product=methionine--tRNA ligase;protein_id=UTX05340.1;transl_table=11 CP101611.1 Genbank gene 56075 56365 . + . ID=gene-NM058_00315;Name=abrB;gbkey=Gene;gene=abrB;gene_biotype=protein_coding;locus_tag=NM058_00315 CP101611.1 Protein Homology CDS 56075 56365 . + 0 ID=cds-UTX05341.1;Parent=gene-NM058_00315;Dbxref=NCBI_GP:UTX05341.1;Name=UTX05341.1;gbkey=CDS;gene=abrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387918.1;locus_tag=NM058_00315;product=transition state genes transcriptional regulator AbrB;protein_id=UTX05341.1;transl_table=11 CP101611.1 Genbank pseudogene 56414 57291 . - . ID=gene-NM058_00320;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=pseudogene;locus_tag=NM058_00320;pseudo=true CP101611.1 Protein Homology CDS 56414 57291 . - 0 ID=cds-NM058_00320;Parent=gene-NM058_00320;Note=frameshifted;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387917.1;locus_tag=NM058_00320;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 57266 57565 . - . ID=gene-NM058_00325;Name=NM058_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00325 CP101611.1 Protein Homology CDS 57266 57565 . - 0 ID=cds-UTX05342.1;Parent=gene-NM058_00325;Dbxref=NCBI_GP:UTX05342.1;Name=UTX05342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387916.1;locus_tag=NM058_00325;product=GIY-YIG nuclease family protein;protein_id=UTX05342.1;transl_table=11 CP101611.1 Genbank pseudogene 57552 58294 . - . ID=gene-NM058_00330;Name=NM058_00330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_00330;pseudo=true CP101611.1 Protein Homology CDS 57552 58294 . - 0 ID=cds-NM058_00330;Parent=gene-NM058_00330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387915.1;locus_tag=NM058_00330;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 58353 58711 . - . ID=gene-NM058_00335;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=pseudogene;gene_synonym=dnaH;locus_tag=NM058_00335;pseudo=true CP101611.1 Protein Homology CDS 58353 58711 . - 0 ID=cds-NM058_00335;Parent=gene-NM058_00335;Note=frameshifted;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387914.1;locus_tag=NM058_00335;product=replication initiation-control protein YabA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 58726 59553 . - . ID=gene-NM058_00340;Name=ricT;gbkey=Gene;gene=ricT;gene_biotype=protein_coding;locus_tag=NM058_00340 CP101611.1 Protein Homology CDS 58726 59553 . - 0 ID=cds-UTX05343.1;Parent=gene-NM058_00340;Dbxref=NCBI_GP:UTX05343.1;Name=UTX05343.1;gbkey=CDS;gene=ricT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387913.1;locus_tag=NM058_00340;product=competence/sporulation regulator complex protein RicT;protein_id=UTX05343.1;transl_table=11 CP101611.1 Genbank gene 59556 60545 . - . ID=gene-NM058_00345;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=NM058_00345 CP101611.1 Protein Homology CDS 59556 60545 . - 0 ID=cds-UTX05344.1;Parent=gene-NM058_00345;Dbxref=NCBI_GP:UTX05344.1;Name=UTX05344.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387912.1;locus_tag=NM058_00345;product=DNA polymerase III subunit delta';protein_id=UTX05344.1;transl_table=11 CP101611.1 Genbank gene 60557 60997 . - . ID=gene-NM058_00350;Name=NM058_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00350 CP101611.1 Protein Homology CDS 60557 60997 . - 0 ID=cds-UTX05345.1;Parent=gene-NM058_00350;Dbxref=NCBI_GP:UTX05345.1;Name=UTX05345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387911.1;locus_tag=NM058_00350;product=YaaR family protein;protein_id=UTX05345.1;transl_table=11 CP101611.1 Genbank gene 61010 61339 . - . ID=gene-NM058_00355;Name=darA;gbkey=Gene;gene=darA;gene_biotype=protein_coding;locus_tag=NM058_00355 CP101611.1 Protein Homology CDS 61010 61339 . - 0 ID=cds-UTX05346.1;Parent=gene-NM058_00355;Dbxref=NCBI_GP:UTX05346.1;Name=UTX05346.1;gbkey=CDS;gene=darA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387910.1;locus_tag=NM058_00355;product=cyclic di-AMP receptor DarA;protein_id=UTX05346.1;transl_table=11 CP101611.1 Genbank gene 61414 62052 . - . ID=gene-NM058_00360;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=NM058_00360 CP101611.1 Protein Homology CDS 61414 62052 . - 0 ID=cds-UTX05347.1;Parent=gene-NM058_00360;Dbxref=NCBI_GP:UTX05347.1;Name=UTX05347.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387909.2;locus_tag=NM058_00360;product=dTMP kinase;protein_id=UTX05347.1;transl_table=11 CP101611.1 Genbank gene 62049 63491 . - . ID=gene-NM058_00365;Name=NM058_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00365 CP101611.1 Protein Homology CDS 62049 63491 . - 0 ID=cds-UTX05348.1;Parent=gene-NM058_00365;Dbxref=NCBI_GP:UTX05348.1;Name=UTX05348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387908.1;locus_tag=NM058_00365;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=UTX05348.1;transl_table=11 CP101611.1 Genbank gene 63573 64730 . - . ID=gene-NM058_00370;Name=NM058_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00370 CP101611.1 Protein Homology CDS 63573 64730 . - 0 ID=cds-UTX05349.1;Parent=gene-NM058_00370;Dbxref=NCBI_GP:UTX05349.1;Name=UTX05349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387907.1;locus_tag=NM058_00370;product=toxic anion resistance protein;protein_id=UTX05349.1;transl_table=11 CP101611.1 Genbank gene 64749 65363 . - . ID=gene-NM058_00375;Name=NM058_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00375 CP101611.1 Protein Homology CDS 64749 65363 . - 0 ID=cds-UTX05350.1;Parent=gene-NM058_00375;Dbxref=NCBI_GP:UTX05350.1;Name=UTX05350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387906.1;locus_tag=NM058_00375;product=5-bromo-4-chloroindolyl phosphate hydrolysis family protein;protein_id=UTX05350.1;transl_table=11 CP101611.1 Genbank gene 65496 65690 . - . ID=gene-NM058_00380;Name=csfB;gbkey=Gene;gene=csfB;gene_biotype=protein_coding;locus_tag=NM058_00380 CP101611.1 Protein Homology CDS 65496 65690 . - 0 ID=cds-UTX05351.1;Parent=gene-NM058_00380;Dbxref=NCBI_GP:UTX05351.1;Name=UTX05351.1;gbkey=CDS;gene=csfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387905.1;locus_tag=NM058_00380;product=anti-sigma-G factor;protein_id=UTX05351.1;transl_table=11 CP101611.1 Genbank gene 65868 65983 . - . ID=gene-NM058_00385;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NM058_00385 CP101611.1 cmsearch rRNA 65868 65983 . - . ID=rna-NM058_00385;Parent=gene-NM058_00385;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00385;product=5S ribosomal RNA CP101611.1 cmsearch exon 65868 65983 . - . ID=exon-NM058_00385-1;Parent=rna-NM058_00385;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00385;product=5S ribosomal RNA CP101611.1 Genbank gene 66038 68965 . - . ID=gene-NM058_00390;Name=NM058_00390;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_00390 CP101611.1 cmsearch rRNA 66038 68965 . - . ID=rna-NM058_00390;Parent=gene-NM058_00390;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00390;product=23S ribosomal RNA CP101611.1 cmsearch exon 66038 68965 . - . ID=exon-NM058_00390-1;Parent=rna-NM058_00390;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00390;product=23S ribosomal RNA CP101611.1 Genbank gene 69047 69122 . - . ID=gene-NM058_00395;Name=NM058_00395;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00395 CP101611.1 tRNAscan-SE tRNA 69047 69122 . - . ID=rna-NM058_00395;Parent=gene-NM058_00395;anticodon=(pos:complement(69087..69089));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00395;product=tRNA-Ala CP101611.1 tRNAscan-SE exon 69047 69122 . - . ID=exon-NM058_00395-1;Parent=rna-NM058_00395;anticodon=(pos:complement(69087..69089));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00395;product=tRNA-Ala CP101611.1 Genbank gene 69134 69210 . - . ID=gene-NM058_00400;Name=NM058_00400;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00400 CP101611.1 tRNAscan-SE tRNA 69134 69210 . - . ID=rna-NM058_00400;Parent=gene-NM058_00400;anticodon=(pos:complement(69174..69176));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00400;product=tRNA-Ile CP101611.1 tRNAscan-SE exon 69134 69210 . - . ID=exon-NM058_00400-1;Parent=rna-NM058_00400;anticodon=(pos:complement(69174..69176));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00400;product=tRNA-Ile CP101611.1 Genbank gene 69312 70861 . - . ID=gene-NM058_00405;Name=NM058_00405;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_00405 CP101611.1 cmsearch rRNA 69312 70861 . - . ID=rna-NM058_00405;Parent=gene-NM058_00405;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00405;product=16S ribosomal RNA CP101611.1 cmsearch exon 69312 70861 . - . ID=exon-NM058_00405-1;Parent=rna-NM058_00405;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00405;product=16S ribosomal RNA CP101611.1 Genbank gene 71106 71369 . - . ID=gene-NM058_00410;Name=bofA;gbkey=Gene;gene=bofA;gene_biotype=protein_coding;locus_tag=NM058_00410 CP101611.1 Protein Homology CDS 71106 71369 . - 0 ID=cds-UTX05352.1;Parent=gene-NM058_00410;Dbxref=NCBI_GP:UTX05352.1;Name=UTX05352.1;gbkey=CDS;gene=bofA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387904.2;locus_tag=NM058_00410;product=sigma-K factor-processing regulator BofA;protein_id=UTX05352.1;transl_table=11 CP101611.1 Genbank gene 71436 71660 . - . ID=gene-NM058_00415;Name=NM058_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00415 CP101611.1 Protein Homology CDS 71436 71660 . - 0 ID=cds-UTX05353.1;Parent=gene-NM058_00415;Dbxref=NCBI_GP:UTX05353.1;Name=UTX05353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387903.1;locus_tag=NM058_00415;product=YaaL family protein;protein_id=UTX05353.1;transl_table=11 CP101611.1 Genbank gene 71678 72274 . - . ID=gene-NM058_00420;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=NM058_00420 CP101611.1 Protein Homology CDS 71678 72274 . - 0 ID=cds-UTX05354.1;Parent=gene-NM058_00420;Dbxref=NCBI_GP:UTX05354.1;Name=UTX05354.1;gbkey=CDS;gene=recR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387902.1;locus_tag=NM058_00420;product=recombination protein RecR;protein_id=UTX05354.1;transl_table=11 CP101611.1 Genbank gene 72289 72612 . - . ID=gene-NM058_00425;Name=NM058_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00425 CP101611.1 Protein Homology CDS 72289 72612 . - 0 ID=cds-UTX05355.1;Parent=gene-NM058_00425;Dbxref=NCBI_GP:UTX05355.1;Name=UTX05355.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387901.1;locus_tag=NM058_00425;product=YbaB/EbfC family nucleoid-associated protein;protein_id=UTX05355.1;transl_table=11 CP101611.1 Genbank gene 72636 74327 . - . ID=gene-NM058_00430;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=NM058_00430 CP101611.1 Protein Homology CDS 72636 74327 . - 0 ID=cds-UTX05356.1;Parent=gene-NM058_00430;Dbxref=NCBI_GP:UTX05356.1;Name=UTX05356.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387900.2;locus_tag=NM058_00430;product=DNA polymerase III subunit gamma/tau;protein_id=UTX05356.1;transl_table=11 CP101611.1 Genbank gene 74457 74721 . - . ID=gene-NM058_00435;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=NM058_00435 CP101611.1 cmsearch SRP_RNA 74457 74721 . - . ID=rna-NM058_00435;Parent=gene-NM058_00435;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00435;product=signal recognition particle sRNA large type CP101611.1 cmsearch exon 74457 74721 . - . ID=exon-NM058_00435-1;Parent=rna-NM058_00435;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00435;product=signal recognition particle sRNA large type CP101611.1 Genbank gene 74804 75289 . - . ID=gene-NM058_00440;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=NM058_00440 CP101611.1 Protein Homology CDS 74804 75289 . - 0 ID=cds-UTX05357.1;Parent=gene-NM058_00440;Dbxref=NCBI_GP:UTX05357.1;Name=UTX05357.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387899.1;locus_tag=NM058_00440;product=tRNA adenosine(34) deaminase TadA;protein_id=UTX05357.1;transl_table=11 CP101611.1 Genbank gene 75375 75920 . + . ID=gene-NM058_00445;Name=NM058_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00445 CP101611.1 Protein Homology CDS 75375 75920 . + 0 ID=cds-UTX05358.1;Parent=gene-NM058_00445;Dbxref=NCBI_GP:UTX05358.1;Name=UTX05358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387898.1;locus_tag=NM058_00445;product=cysteine hydrolase;protein_id=UTX05358.1;transl_table=11 CP101611.1 Genbank gene 75991 77274 . + . ID=gene-NM058_00450;Name=NM058_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00450 CP101611.1 Protein Homology CDS 75991 77274 . + 0 ID=cds-UTX05359.1;Parent=gene-NM058_00450;Dbxref=NCBI_GP:UTX05359.1;Name=UTX05359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387897.1;locus_tag=NM058_00450;product=glycoside hydrolase family 18 protein;protein_id=UTX05359.1;transl_table=11 CP101611.1 Genbank gene 77373 77996 . + . ID=gene-NM058_00455;Name=dgk;gbkey=Gene;gene=dgk;gene_biotype=protein_coding;locus_tag=NM058_00455 CP101611.1 Protein Homology CDS 77373 77996 . + 0 ID=cds-UTX05360.1;Parent=gene-NM058_00455;Dbxref=NCBI_GP:UTX05360.1;Name=UTX05360.1;gbkey=CDS;gene=dgk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387896.1;locus_tag=NM058_00455;product=deoxyguanosine kinase;protein_id=UTX05360.1;transl_table=11 CP101611.1 Genbank gene 77993 78646 . + . ID=gene-NM058_00460;Name=dck;gbkey=Gene;gene=dck;gene_biotype=protein_coding;locus_tag=NM058_00460 CP101611.1 Protein Homology CDS 77993 78646 . + 0 ID=cds-UTX05361.1;Parent=gene-NM058_00460;Dbxref=NCBI_GP:UTX05361.1;Name=UTX05361.1;gbkey=CDS;gene=dck;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387895.1;locus_tag=NM058_00460;product=deoxyadenosine/deoxycytidine kinase;protein_id=UTX05361.1;transl_table=11 CP101611.1 Genbank gene 78757 78849 . - . ID=gene-NM058_00465;Name=NM058_00465;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00465 CP101611.1 tRNAscan-SE tRNA 78757 78849 . - . ID=rna-NM058_00465;Parent=gene-NM058_00465;anticodon=(pos:complement(78811..78813));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00465;product=tRNA-Ser CP101611.1 tRNAscan-SE exon 78757 78849 . - . ID=exon-NM058_00465-1;Parent=rna-NM058_00465;anticodon=(pos:complement(78811..78813));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00465;product=tRNA-Ser CP101611.1 Genbank gene 78985 80262 . - . ID=gene-NM058_00470;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=NM058_00470 CP101611.1 Protein Homology CDS 78985 80262 . - 0 ID=cds-UTX05362.1;Parent=gene-NM058_00470;Dbxref=NCBI_GP:UTX05362.1;Name=UTX05362.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387894.1;locus_tag=NM058_00470;product=serine--tRNA ligase;protein_id=UTX05362.1;transl_table=11 CP101611.1 cmsearch binding_site 80317 80529 . - . ID=id-CP101611.1:80317..80529;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 CP101611.1 Genbank gene 80582 81172 . - . ID=gene-NM058_00475;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;locus_tag=NM058_00475 CP101611.1 Protein Homology CDS 80582 81172 . - 0 ID=cds-UTX05363.1;Parent=gene-NM058_00475;Dbxref=NCBI_GP:UTX05363.1;Name=UTX05363.1;Ontology_term=GO:0042823,GO:0016884;gbkey=CDS;gene=pdxT;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387893.1;locus_tag=NM058_00475;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=UTX05363.1;transl_table=11 CP101611.1 Genbank gene 81194 82078 . - . ID=gene-NM058_00480;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=NM058_00480 CP101611.1 Protein Homology CDS 81194 82078 . - 0 ID=cds-UTX05364.1;Parent=gene-NM058_00480;Dbxref=NCBI_GP:UTX05364.1;Name=UTX05364.1;Ontology_term=GO:0008615;gbkey=CDS;gene=pdxS;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387892.1;locus_tag=NM058_00480;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=UTX05364.1;transl_table=11 CP101611.1 Genbank gene 82275 83606 . - . ID=gene-NM058_00485;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=NM058_00485 CP101611.1 Protein Homology CDS 82275 83606 . - 0 ID=cds-UTX05365.1;Parent=gene-NM058_00485;Dbxref=NCBI_GP:UTX05365.1;Name=UTX05365.1;gbkey=CDS;gene=dacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387891.1;locus_tag=NM058_00485;product=D-alanyl-D-alanine carboxypeptidase;protein_id=UTX05365.1;transl_table=11 CP101611.1 Genbank gene 83759 85225 . - . ID=gene-NM058_00490;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=NM058_00490 CP101611.1 Protein Homology CDS 83759 85225 . - 0 ID=cds-UTX05366.1;Parent=gene-NM058_00490;Dbxref=NCBI_GP:UTX05366.1;Name=UTX05366.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387890.1;locus_tag=NM058_00490;product=IMP dehydrogenase;protein_id=UTX05366.1;transl_table=11 CP101611.1 Genbank gene 85346 86293 . + . ID=gene-NM058_00495;Name=NM058_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00495 CP101611.1 Protein Homology CDS 85346 86293 . + 0 ID=cds-UTX05367.1;Parent=gene-NM058_00495;Dbxref=NCBI_GP:UTX05367.1;Name=UTX05367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387889.1;locus_tag=NM058_00495;product=YaaC family protein;protein_id=UTX05367.1;transl_table=11 CP101611.1 Genbank gene 86334 86449 . - . ID=gene-NM058_00500;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NM058_00500 CP101611.1 cmsearch rRNA 86334 86449 . - . ID=rna-NM058_00500;Parent=gene-NM058_00500;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00500;product=5S ribosomal RNA CP101611.1 cmsearch exon 86334 86449 . - . ID=exon-NM058_00500-1;Parent=rna-NM058_00500;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00500;product=5S ribosomal RNA CP101611.1 Genbank gene 86504 89431 . - . ID=gene-NM058_00505;Name=NM058_00505;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_00505 CP101611.1 cmsearch rRNA 86504 89431 . - . ID=rna-NM058_00505;Parent=gene-NM058_00505;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00505;product=23S ribosomal RNA CP101611.1 cmsearch exon 86504 89431 . - . ID=exon-NM058_00505-1;Parent=rna-NM058_00505;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00505;product=23S ribosomal RNA CP101611.1 Genbank gene 89513 89588 . - . ID=gene-NM058_00510;Name=NM058_00510;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00510 CP101611.1 tRNAscan-SE tRNA 89513 89588 . - . ID=rna-NM058_00510;Parent=gene-NM058_00510;anticodon=(pos:complement(89553..89555));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00510;product=tRNA-Ala CP101611.1 tRNAscan-SE exon 89513 89588 . - . ID=exon-NM058_00510-1;Parent=rna-NM058_00510;anticodon=(pos:complement(89553..89555));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00510;product=tRNA-Ala CP101611.1 Genbank gene 89600 89676 . - . ID=gene-NM058_00515;Name=NM058_00515;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00515 CP101611.1 tRNAscan-SE tRNA 89600 89676 . - . ID=rna-NM058_00515;Parent=gene-NM058_00515;anticodon=(pos:complement(89640..89642));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00515;product=tRNA-Ile CP101611.1 tRNAscan-SE exon 89600 89676 . - . ID=exon-NM058_00515-1;Parent=rna-NM058_00515;anticodon=(pos:complement(89640..89642));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00515;product=tRNA-Ile CP101611.1 Genbank gene 89778 91328 . - . ID=gene-NM058_00520;Name=NM058_00520;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_00520 CP101611.1 cmsearch rRNA 89778 91328 . - . ID=rna-NM058_00520;Parent=gene-NM058_00520;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00520;product=16S ribosomal RNA CP101611.1 cmsearch exon 89778 91328 . - . ID=exon-NM058_00520-1;Parent=rna-NM058_00520;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_00520;product=16S ribosomal RNA CP101611.1 Genbank pseudogene 91610 94074 . - . ID=gene-NM058_00525;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=pseudogene;locus_tag=NM058_00525;pseudo=true CP101611.1 Protein Homology CDS 91610 94074 . - 0 ID=cds-NM058_00525;Parent=gene-NM058_00525;Note=frameshifted;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387888.1;locus_tag=NM058_00525;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 94284 96199 . - . ID=gene-NM058_00530;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=pseudogene;locus_tag=NM058_00530;pseudo=true CP101611.1 Protein Homology CDS 94284 96199 . - 0 ID=cds-NM058_00530;Parent=gene-NM058_00530;Note=frameshifted;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387887.1;locus_tag=NM058_00530;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;pseudo=true;transl_table=11 CP101611.1 Genbank gene 96253 96498 . - . ID=gene-NM058_00535;Name=remB;gbkey=Gene;gene=remB;gene_biotype=protein_coding;locus_tag=NM058_00535 CP101611.1 Protein Homology CDS 96253 96498 . - 0 ID=cds-UTX05368.1;Parent=gene-NM058_00535;Dbxref=NCBI_GP:UTX05368.1;Name=UTX05368.1;gbkey=CDS;gene=remB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387886.2;locus_tag=NM058_00535;product=extracellular matrix regulator RemB;protein_id=UTX05368.1;transl_table=11 CP101611.1 Genbank gene 96516 97628 . - . ID=gene-NM058_00540;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=NM058_00540 CP101611.1 Protein Homology CDS 96516 97628 . - 0 ID=cds-UTX05369.1;Parent=gene-NM058_00540;Dbxref=NCBI_GP:UTX05369.1;Name=UTX05369.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387885.1;locus_tag=NM058_00540;product=DNA replication/repair protein RecF;protein_id=UTX05369.1;transl_table=11 CP101611.1 Genbank gene 97644 97859 . - . ID=gene-NM058_00545;Name=rlbA;gbkey=Gene;gene=rlbA;gene_biotype=protein_coding;gene_synonym=yaaA;locus_tag=NM058_00545 CP101611.1 Protein Homology CDS 97644 97859 . - 0 ID=cds-UTX05370.1;Parent=gene-NM058_00545;Dbxref=NCBI_GP:UTX05370.1;Name=UTX05370.1;gbkey=CDS;gene=rlbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387884.1;locus_tag=NM058_00545;product=ribosome maturation protein RlbA;protein_id=UTX05370.1;transl_table=11 CP101611.1 Genbank gene 97991 99127 . - . ID=gene-NM058_00550;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=NM058_00550 CP101611.1 Protein Homology CDS 97991 99127 . - 0 ID=cds-UTX05371.1;Parent=gene-NM058_00550;Dbxref=NCBI_GP:UTX05371.1;Name=UTX05371.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387883.1;locus_tag=NM058_00550;product=DNA polymerase III subunit beta;protein_id=UTX05371.1;transl_table=11 CP101611.1 Genbank gene 99316 100656 . - . ID=gene-NM058_00555;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=NM058_00555 CP101611.1 Protein Homology CDS 99316 100656 . - 0 ID=cds-UTX05372.1;Parent=gene-NM058_00555;Dbxref=NCBI_GP:UTX05372.1;Name=UTX05372.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387882.1;locus_tag=NM058_00555;product=chromosomal replication initiator protein DnaA;protein_id=UTX05372.1;transl_table=11 CP101611.1 Genbank gene 101282 101416 . + . ID=gene-NM058_00560;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=NM058_00560 CP101611.1 Protein Homology CDS 101282 101416 . + 0 ID=cds-UTX05373.1;Parent=gene-NM058_00560;Dbxref=NCBI_GP:UTX05373.1;Name=UTX05373.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003397591.1;locus_tag=NM058_00560;product=50S ribosomal protein L34;protein_id=UTX05373.1;transl_table=11 CP101611.1 Genbank gene 101569 101919 . + . ID=gene-NM058_00565;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=NM058_00565 CP101611.1 Protein Homology CDS 101569 101919 . + 0 ID=cds-UTX05374.1;Parent=gene-NM058_00565;Dbxref=NCBI_GP:UTX05374.1;Name=UTX05374.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391985.1;locus_tag=NM058_00565;product=ribonuclease P protein component;protein_id=UTX05374.1;transl_table=11 CP101611.1 Genbank gene 102064 102849 . + . ID=gene-NM058_00570;Name=spoIIIJ;gbkey=Gene;gene=spoIIIJ;gene_biotype=protein_coding;locus_tag=NM058_00570 CP101611.1 Protein Homology CDS 102064 102849 . + 0 ID=cds-UTX05375.1;Parent=gene-NM058_00570;Dbxref=NCBI_GP:UTX05375.1;Name=UTX05375.1;gbkey=CDS;gene=spoIIIJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391984.1;locus_tag=NM058_00570;product=YidC family membrane integrase SpoIIIJ;protein_id=UTX05375.1;transl_table=11 CP101611.1 Genbank gene 102846 103472 . + . ID=gene-NM058_00575;Name=NM058_00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00575 CP101611.1 Protein Homology CDS 102846 103472 . + 0 ID=cds-UTX05376.1;Parent=gene-NM058_00575;Dbxref=NCBI_GP:UTX05376.1;Name=UTX05376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391983.1;locus_tag=NM058_00575;product=protein jag;protein_id=UTX05376.1;transl_table=11 CP101611.1 Genbank gene 103784 105163 . + . ID=gene-NM058_00580;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=NM058_00580 CP101611.1 Protein Homology CDS 103784 105163 . + 0 ID=cds-UTX05377.1;Parent=gene-NM058_00580;Dbxref=NCBI_GP:UTX05377.1;Name=UTX05377.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391982.1;locus_tag=NM058_00580;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=UTX05377.1;transl_table=11 CP101611.1 Genbank gene 105184 107070 . + . ID=gene-NM058_00585;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=NM058_00585 CP101611.1 Protein Homology CDS 105184 107070 . + 0 ID=cds-UTX05378.1;Parent=gene-NM058_00585;Dbxref=NCBI_GP:UTX05378.1;Name=UTX05378.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391981.1;locus_tag=NM058_00585;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=UTX05378.1;transl_table=11 CP101611.1 Genbank gene 107084 107803 . + . ID=gene-NM058_00590;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=NM058_00590 CP101611.1 Protein Homology CDS 107084 107803 . + 0 ID=cds-UTX05379.1;Parent=gene-NM058_00590;Dbxref=NCBI_GP:UTX05379.1;Name=UTX05379.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391980.1;locus_tag=NM058_00590;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=UTX05379.1;transl_table=11 CP101611.1 Genbank gene 107925 108776 . + . ID=gene-NM058_00595;Name=noc;gbkey=Gene;gene=noc;gene_biotype=protein_coding;locus_tag=NM058_00595 CP101611.1 Protein Homology CDS 107925 108776 . + 0 ID=cds-UTX05380.1;Parent=gene-NM058_00595;Dbxref=NCBI_GP:UTX05380.1;Name=UTX05380.1;Ontology_term=GO:0032466,GO:0043565;gbkey=CDS;gene=noc;go_function=sequence-specific DNA binding|0043565||IEA;go_process=negative regulation of cytokinesis|0032466||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391979.1;locus_tag=NM058_00595;product=nucleoid occlusion protein;protein_id=UTX05380.1;transl_table=11 CP101611.1 Genbank gene 108827 109267 . - . ID=gene-NM058_00600;Name=NM058_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00600 CP101611.1 Protein Homology CDS 108827 109267 . - 0 ID=cds-UTX06928.1;Parent=gene-NM058_00600;Dbxref=NCBI_GP:UTX06928.1;Name=UTX06928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014666146.1;locus_tag=NM058_00600;product=PH domain-containing protein;protein_id=UTX06928.1;transl_table=11 CP101611.1 Genbank gene 109511 110272 . + . ID=gene-NM058_00605;Name=soj;gbkey=Gene;gene=soj;gene_biotype=protein_coding;locus_tag=NM058_00605 CP101611.1 Protein Homology CDS 109511 110272 . + 0 ID=cds-UTX05381.1;Parent=gene-NM058_00605;Dbxref=NCBI_GP:UTX05381.1;Name=UTX05381.1;gbkey=CDS;gene=soj;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391977.1;locus_tag=NM058_00605;product=sporulation initiation inhibitor protein Soj;protein_id=UTX05381.1;transl_table=11 CP101611.1 Genbank gene 110265 111113 . + . ID=gene-NM058_00610;Name=spo0J;gbkey=Gene;gene=spo0J;gene_biotype=protein_coding;locus_tag=NM058_00610 CP101611.1 Protein Homology CDS 110265 111113 . + 0 ID=cds-UTX05382.1;Parent=gene-NM058_00610;Dbxref=NCBI_GP:UTX05382.1;Name=UTX05382.1;gbkey=CDS;gene=spo0J;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391976.1;locus_tag=NM058_00610;product=stage 0 sporulation protein Spo0J;protein_id=UTX05382.1;transl_table=11 CP101611.1 Genbank gene 111152 111769 . - . ID=gene-NM058_00615;Name=yyaC;gbkey=Gene;gene=yyaC;gene_biotype=protein_coding;locus_tag=NM058_00615 CP101611.1 Protein Homology CDS 111152 111769 . - 0 ID=cds-UTX05383.1;Parent=gene-NM058_00615;Dbxref=NCBI_GP:UTX05383.1;Name=UTX05383.1;gbkey=CDS;gene=yyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391975.1;locus_tag=NM058_00615;product=spore protease YyaC;protein_id=UTX05383.1;transl_table=11 CP101611.1 Genbank gene 112195 113211 . + . ID=gene-NM058_00620;Name=NM058_00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00620 CP101611.1 Protein Homology CDS 112195 113211 . + 0 ID=cds-UTX06929.1;Parent=gene-NM058_00620;Dbxref=NCBI_GP:UTX06929.1;Name=UTX06929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391974.1;locus_tag=NM058_00620;product=hypothetical protein;protein_id=UTX06929.1;transl_table=11 CP101611.1 Genbank gene 113305 113511 . + . ID=gene-NM058_00625;Name=NM058_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00625 CP101611.1 Protein Homology CDS 113305 113511 . + 0 ID=cds-UTX05384.1;Parent=gene-NM058_00625;Dbxref=NCBI_GP:UTX05384.1;Name=UTX05384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097803.1;locus_tag=NM058_00625;product=DUF951 domain-containing protein;protein_id=UTX05384.1;transl_table=11 CP101611.1 Genbank gene 113562 115565 . + . ID=gene-NM058_00630;Name=NM058_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00630 CP101611.1 Protein Homology CDS 113562 115565 . + 0 ID=cds-UTX05385.1;Parent=gene-NM058_00630;Dbxref=NCBI_GP:UTX05385.1;Name=UTX05385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013390719.1;locus_tag=NM058_00630;product=molybdopterin-dependent oxidoreductase;protein_id=UTX05385.1;transl_table=11 CP101611.1 Genbank gene 115692 116792 . + . ID=gene-NM058_00635;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=NM058_00635 CP101611.1 Protein Homology CDS 115692 116792 . + 0 ID=cds-UTX05386.1;Parent=gene-NM058_00635;Dbxref=NCBI_GP:UTX05386.1;Name=UTX05386.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391972.1;locus_tag=NM058_00635;product=redox-regulated ATPase YchF;protein_id=UTX05386.1;transl_table=11 CP101611.1 Genbank gene 116903 117190 . + . ID=gene-NM058_00640;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=NM058_00640 CP101611.1 Protein Homology CDS 116903 117190 . + 0 ID=cds-UTX05387.1;Parent=gene-NM058_00640;Dbxref=NCBI_GP:UTX05387.1;Name=UTX05387.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391971.1;locus_tag=NM058_00640;product=30S ribosomal protein S6;protein_id=UTX05387.1;transl_table=11 CP101611.1 Genbank pseudogene 117231 117748 . + . ID=gene-NM058_00645;Name=ssbA;gbkey=Gene;gene=ssbA;gene_biotype=pseudogene;locus_tag=NM058_00645;pseudo=true CP101611.1 Protein Homology CDS 117231 117748 . + 0 ID=cds-NM058_00645;Parent=gene-NM058_00645;Note=frameshifted;Ontology_term=GO:0003697;gbkey=CDS;gene=ssbA;go_function=single-stranded DNA binding|0003697||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391970.1;locus_tag=NM058_00645;product=single-stranded DNA-binding protein SsbA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 117792 118031 . + . ID=gene-NM058_00650;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=NM058_00650 CP101611.1 Protein Homology CDS 117792 118031 . + 0 ID=cds-UTX05388.1;Parent=gene-NM058_00650;Dbxref=NCBI_GP:UTX05388.1;Name=UTX05388.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003219224.1;locus_tag=NM058_00650;product=30S ribosomal protein S18;protein_id=UTX05388.1;transl_table=11 CP101611.1 Genbank gene 118092 118850 . + . ID=gene-NM058_00655;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=NM058_00655 CP101611.1 Protein Homology CDS 118092 118850 . + 0 ID=cds-UTX05389.1;Parent=gene-NM058_00655;Dbxref=NCBI_GP:UTX05389.1;Name=UTX05389.1;Ontology_term=GO:0006281,GO:0008853;gbkey=CDS;gene=xth;go_function=exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391968.1;locus_tag=NM058_00655;product=exodeoxyribonuclease III;protein_id=UTX05389.1;transl_table=11 CP101611.1 Genbank pseudogene 118909 119837 . + . ID=gene-NM058_00660;Name=NM058_00660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_00660;pseudo=true CP101611.1 Protein Homology CDS 118909 119837 . + 0 ID=cds-NM058_00660;Parent=gene-NM058_00660;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391967.1;locus_tag=NM058_00660;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank gene 119898 120278 . + . ID=gene-NM058_00665;Name=NM058_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00665 CP101611.1 Protein Homology CDS 119898 120278 . + 0 ID=cds-UTX06930.1;Parent=gene-NM058_00665;Dbxref=NCBI_GP:UTX06930.1;Name=UTX06930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391966.1;locus_tag=NM058_00665;product=VOC family protein;protein_id=UTX06930.1;transl_table=11 CP101611.1 Genbank gene 120351 121706 . - . ID=gene-NM058_00670;Name=NM058_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00670 CP101611.1 Protein Homology CDS 120351 121706 . - 0 ID=cds-UTX05390.1;Parent=gene-NM058_00670;Dbxref=NCBI_GP:UTX05390.1;Name=UTX05390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391964.2;locus_tag=NM058_00670;product=MFS transporter;protein_id=UTX05390.1;transl_table=11 CP101611.1 Genbank pseudogene 121933 122831 . + . ID=gene-NM058_00675;Name=NM058_00675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_00675;pseudo=true CP101611.1 Protein Homology CDS 121933 122831 . + 0 ID=cds-NM058_00675;Parent=gene-NM058_00675;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391963.1;locus_tag=NM058_00675;product=CPBP family intramembrane metalloprotease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 122828 124897 . - . ID=gene-NM058_00680;Name=NM058_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00680 CP101611.1 Protein Homology CDS 122828 124897 . - 0 ID=cds-UTX05391.1;Parent=gene-NM058_00680;Dbxref=NCBI_GP:UTX05391.1;Name=UTX05391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391962.1;locus_tag=NM058_00680;product=thioredoxin domain-containing protein;protein_id=UTX05391.1;transl_table=11 CP101611.1 Genbank gene 124976 125806 . - . ID=gene-NM058_00685;Name=NM058_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00685 CP101611.1 GeneMarkS-2+ CDS 124976 125806 . - 0 ID=cds-UTX05392.1;Parent=gene-NM058_00685;Dbxref=NCBI_GP:UTX05392.1;Name=UTX05392.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_00685;product=hypothetical protein;protein_id=UTX05392.1;transl_table=11 CP101611.1 Genbank gene 125830 126348 . - . ID=gene-NM058_00690;Name=NM058_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00690 CP101611.1 Protein Homology CDS 125830 126348 . - 0 ID=cds-UTX05393.1;Parent=gene-NM058_00690;Dbxref=NCBI_GP:UTX05393.1;Name=UTX05393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019716392.1;locus_tag=NM058_00690;product=ImmA/IrrE family metallo-endopeptidase;protein_id=UTX05393.1;transl_table=11 CP101611.1 Genbank pseudogene 126345 126566 . - . ID=gene-NM058_00695;Name=NM058_00695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_00695;pseudo=true CP101611.1 Protein Homology CDS 126345 126566 . - 0 ID=cds-NM058_00695;Parent=gene-NM058_00695;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240393.1;locus_tag=NM058_00695;product=transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank gene 126530 127231 . - . ID=gene-NM058_00700;Name=NM058_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00700 CP101611.1 Protein Homology CDS 126530 127231 . - 0 ID=cds-UTX05394.1;Parent=gene-NM058_00700;Dbxref=NCBI_GP:UTX05394.1;Name=UTX05394.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012464.2;locus_tag=NM058_00700;product=recombinase family protein;protein_id=UTX05394.1;transl_table=11 CP101611.1 Genbank gene 127321 128847 . + . ID=gene-NM058_00705;Name=NM058_00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00705 CP101611.1 Protein Homology CDS 127321 128847 . + 0 ID=cds-UTX05395.1;Parent=gene-NM058_00705;Dbxref=NCBI_GP:UTX05395.1;Name=UTX05395.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017539.2;locus_tag=NM058_00705;product=NACHT domain-containing protein;protein_id=UTX05395.1;transl_table=11 CP101611.1 Genbank gene 128907 129263 . + . ID=gene-NM058_00710;Name=NM058_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00710 CP101611.1 GeneMarkS-2+ CDS 128907 129263 . + 0 ID=cds-UTX05396.1;Parent=gene-NM058_00710;Dbxref=NCBI_GP:UTX05396.1;Name=UTX05396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_00710;product=hypothetical protein;protein_id=UTX05396.1;transl_table=11 CP101611.1 Genbank gene 129625 129900 . - . ID=gene-NM058_00715;Name=NM058_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00715 CP101611.1 GeneMarkS-2+ CDS 129625 129900 . - 0 ID=cds-UTX05397.1;Parent=gene-NM058_00715;Dbxref=NCBI_GP:UTX05397.1;Name=UTX05397.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_00715;product=hypothetical protein;protein_id=UTX05397.1;transl_table=11 CP101611.1 Genbank gene 130110 130841 . - . ID=gene-NM058_00720;Name=NM058_00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00720 CP101611.1 Protein Homology CDS 130110 130841 . - 0 ID=cds-UTX05398.1;Parent=gene-NM058_00720;Dbxref=NCBI_GP:UTX05398.1;Name=UTX05398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019419639.1;locus_tag=NM058_00720;product=MerR family transcriptional regulator;protein_id=UTX05398.1;transl_table=11 CP101611.1 Genbank gene 130843 131181 . - . ID=gene-NM058_00725;Name=NM058_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00725 CP101611.1 Protein Homology CDS 130843 131181 . - 0 ID=cds-UTX05399.1;Parent=gene-NM058_00725;Dbxref=NCBI_GP:UTX05399.1;Name=UTX05399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019419638.1;locus_tag=NM058_00725;product=DUF4870 domain-containing protein;protein_id=UTX05399.1;transl_table=11 CP101611.1 Genbank gene 131566 131928 . - . ID=gene-NM058_00730;Name=NM058_00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00730 CP101611.1 Protein Homology CDS 131566 131928 . - 0 ID=cds-UTX05400.1;Parent=gene-NM058_00730;Dbxref=NCBI_GP:UTX05400.1;Name=UTX05400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391955.1;locus_tag=NM058_00730;product=MmcQ/YjbR family DNA-binding protein;protein_id=UTX05400.1;transl_table=11 CP101611.1 Genbank gene 132601 133509 . + . ID=gene-NM058_00735;Name=NM058_00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00735 CP101611.1 Protein Homology CDS 132601 133509 . + 0 ID=cds-UTX05401.1;Parent=gene-NM058_00735;Dbxref=NCBI_GP:UTX05401.1;Name=UTX05401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019260034.1;locus_tag=NM058_00735;product=Tat pathway signal protein;protein_id=UTX05401.1;transl_table=11 CP101611.1 Genbank gene 133957 134265 . + . ID=gene-NM058_00740;Name=NM058_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00740 CP101611.1 Protein Homology CDS 133957 134265 . + 0 ID=cds-UTX05402.1;Parent=gene-NM058_00740;Dbxref=NCBI_GP:UTX05402.1;Name=UTX05402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236591.1;locus_tag=NM058_00740;product=hypothetical protein;protein_id=UTX05402.1;transl_table=11 CP101611.1 Genbank gene 134450 135046 . - . ID=gene-NM058_00745;Name=NM058_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00745 CP101611.1 Protein Homology CDS 134450 135046 . - 0 ID=cds-UTX05403.1;Parent=gene-NM058_00745;Dbxref=NCBI_GP:UTX05403.1;Name=UTX05403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019260033.1;locus_tag=NM058_00745;product=YitT family protein;protein_id=UTX05403.1;transl_table=11 CP101611.1 Genbank gene 135043 135489 . - . ID=gene-NM058_00750;Name=NM058_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00750 CP101611.1 Protein Homology CDS 135043 135489 . - 0 ID=cds-UTX05404.1;Parent=gene-NM058_00750;Dbxref=NCBI_GP:UTX05404.1;Name=UTX05404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019260032.1;locus_tag=NM058_00750;product=GNAT family N-acetyltransferase;protein_id=UTX05404.1;transl_table=11 CP101611.1 Genbank gene 135609 136061 . + . ID=gene-NM058_00755;Name=NM058_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00755 CP101611.1 Protein Homology CDS 135609 136061 . + 0 ID=cds-UTX05405.1;Parent=gene-NM058_00755;Dbxref=NCBI_GP:UTX05405.1;Name=UTX05405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391951.1;locus_tag=NM058_00755;product=MarR family transcriptional regulator;protein_id=UTX05405.1;transl_table=11 CP101611.1 Genbank pseudogene 136225 136579 . - . ID=gene-NM058_00760;Name=NM058_00760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_00760;pseudo=true CP101611.1 Protein Homology CDS 136225 136579 . - 0 ID=cds-NM058_00760;Parent=gene-NM058_00760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236584.1;locus_tag=NM058_00760;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank gene 136684 137346 . + . ID=gene-NM058_00765;Name=NM058_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00765 CP101611.1 Protein Homology CDS 136684 137346 . + 0 ID=cds-UTX05406.1;Parent=gene-NM058_00765;Dbxref=NCBI_GP:UTX05406.1;Name=UTX05406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391950.1;locus_tag=NM058_00765;product=MBL fold metallo-hydrolase;protein_id=UTX05406.1;transl_table=11 CP101611.1 Genbank gene 137397 137774 . - . ID=gene-NM058_00770;Name=NM058_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00770 CP101611.1 Protein Homology CDS 137397 137774 . - 0 ID=cds-UTX05407.1;Parent=gene-NM058_00770;Dbxref=NCBI_GP:UTX05407.1;Name=UTX05407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236582.1;locus_tag=NM058_00770;product=VOC family protein;protein_id=UTX05407.1;transl_table=11 CP101611.1 Genbank gene 137798 138394 . - . ID=gene-NM058_00775;Name=NM058_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00775 CP101611.1 Protein Homology CDS 137798 138394 . - 0 ID=cds-UTX05408.1;Parent=gene-NM058_00775;Dbxref=NCBI_GP:UTX05408.1;Name=UTX05408.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012382.2;locus_tag=NM058_00775;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=UTX05408.1;transl_table=11 CP101611.1 Genbank gene 138349 139050 . - . ID=gene-NM058_00780;Name=NM058_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00780 CP101611.1 Protein Homology CDS 138349 139050 . - 0 ID=cds-UTX05409.1;Parent=gene-NM058_00780;Dbxref=NCBI_GP:UTX05409.1;Name=UTX05409.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012382.2;locus_tag=NM058_00780;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=UTX05409.1;transl_table=11 CP101611.1 Genbank gene 139222 139800 . - . ID=gene-NM058_00785;Name=NM058_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00785 CP101611.1 Protein Homology CDS 139222 139800 . - 0 ID=cds-UTX05410.1;Parent=gene-NM058_00785;Dbxref=NCBI_GP:UTX05410.1;Name=UTX05410.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015483972.1;locus_tag=NM058_00785;product=LysE family transporter;protein_id=UTX05410.1;transl_table=11 CP101611.1 Genbank pseudogene 139929 140815 . + . ID=gene-NM058_00790;Name=NM058_00790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_00790;pseudo=true CP101611.1 Protein Homology CDS 139929 140815 . + 0 ID=cds-NM058_00790;Parent=gene-NM058_00790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236579.1;locus_tag=NM058_00790;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 140862 141340 . - . ID=gene-NM058_00795;Name=NM058_00795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_00795;pseudo=true CP101611.1 Protein Homology CDS 140862 141340 . - 0 ID=cds-NM058_00795;Parent=gene-NM058_00795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391949.1;locus_tag=NM058_00795;product=DUF2798 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 141423 141866 . - . ID=gene-NM058_00800;Name=NM058_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00800 CP101611.1 Protein Homology CDS 141423 141866 . - 0 ID=cds-UTX05411.1;Parent=gene-NM058_00800;Dbxref=NCBI_GP:UTX05411.1;Name=UTX05411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391948.1;locus_tag=NM058_00800;product=GNAT family N-acetyltransferase;protein_id=UTX05411.1;transl_table=11 CP101611.1 Genbank gene 141881 142759 . - . ID=gene-NM058_00805;Name=NM058_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00805 CP101611.1 Protein Homology CDS 141881 142759 . - 0 ID=cds-UTX05412.1;Parent=gene-NM058_00805;Dbxref=NCBI_GP:UTX05412.1;Name=UTX05412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391947.2;locus_tag=NM058_00805;product=LysR family transcriptional regulator;protein_id=UTX05412.1;transl_table=11 CP101611.1 Genbank gene 142947 144161 . + . ID=gene-NM058_00810;Name=NM058_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00810 CP101611.1 Protein Homology CDS 142947 144161 . + 0 ID=cds-UTX05413.1;Parent=gene-NM058_00810;Dbxref=NCBI_GP:UTX05413.1;Name=UTX05413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391946.1;locus_tag=NM058_00810;product=MFS transporter;protein_id=UTX05413.1;transl_table=11 CP101611.1 Genbank gene 144196 145035 . - . ID=gene-NM058_00815;Name=NM058_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00815 CP101611.1 Protein Homology CDS 144196 145035 . - 0 ID=cds-UTX05414.1;Parent=gene-NM058_00815;Dbxref=NCBI_GP:UTX05414.1;Name=UTX05414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391945.1;locus_tag=NM058_00815;product=pentapeptide repeat-containing protein;protein_id=UTX05414.1;transl_table=11 CP101611.1 Genbank gene 145185 145574 . + . ID=gene-NM058_00820;Name=NM058_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00820 CP101611.1 Protein Homology CDS 145185 145574 . + 0 ID=cds-UTX05415.1;Parent=gene-NM058_00820;Dbxref=NCBI_GP:UTX05415.1;Name=UTX05415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391944.1;locus_tag=NM058_00820;product=nuclear transport factor 2 family protein;protein_id=UTX05415.1;transl_table=11 CP101611.1 Genbank pseudogene 145648 146441 . + . ID=gene-NM058_00825;Name=NM058_00825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_00825;pseudo=true CP101611.1 Protein Homology CDS 145648 146441 . + 0 ID=cds-NM058_00825;Parent=gene-NM058_00825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391943.1;locus_tag=NM058_00825;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 146486 147796 . - . ID=gene-NM058_00830;Name=NM058_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00830 CP101611.1 Protein Homology CDS 146486 147796 . - 0 ID=cds-UTX05416.1;Parent=gene-NM058_00830;Dbxref=NCBI_GP:UTX05416.1;Name=UTX05416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019716358.1;locus_tag=NM058_00830;product=MFS transporter;protein_id=UTX05416.1;transl_table=11 CP101611.1 Genbank gene 148232 148678 . + . ID=gene-NM058_00835;Name=NM058_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00835 CP101611.1 Protein Homology CDS 148232 148678 . + 0 ID=cds-UTX05417.1;Parent=gene-NM058_00835;Dbxref=NCBI_GP:UTX05417.1;Name=UTX05417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391936.1;locus_tag=NM058_00835;product=DUF6376 family protein;protein_id=UTX05417.1;transl_table=11 CP101611.1 Genbank gene 148710 149639 . - . ID=gene-NM058_00840;Name=NM058_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00840 CP101611.1 Protein Homology CDS 148710 149639 . - 0 ID=cds-UTX05418.1;Parent=gene-NM058_00840;Dbxref=NCBI_GP:UTX05418.1;Name=UTX05418.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391935.1;locus_tag=NM058_00840;product=manganese-dependent inorganic pyrophosphatase;protein_id=UTX05418.1;transl_table=11 CP101611.1 Genbank gene 149844 150221 . + . ID=gene-NM058_00845;Name=hypR;gbkey=Gene;gene=hypR;gene_biotype=protein_coding;gene_synonym=yybR;locus_tag=NM058_00845 CP101611.1 Protein Homology CDS 149844 150221 . + 0 ID=cds-UTX05419.1;Parent=gene-NM058_00845;Dbxref=NCBI_GP:UTX05419.1;Name=UTX05419.1;gbkey=CDS;gene=hypR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391934.1;locus_tag=NM058_00845;product=transcriptional regulator HypR;protein_id=UTX05419.1;transl_table=11 CP101611.1 Genbank gene 150251 150730 . - . ID=gene-NM058_00850;Name=cotF;gbkey=Gene;gene=cotF;gene_biotype=protein_coding;locus_tag=NM058_00850 CP101611.1 Protein Homology CDS 150251 150730 . - 0 ID=cds-UTX05420.1;Parent=gene-NM058_00850;Dbxref=NCBI_GP:UTX05420.1;Name=UTX05420.1;gbkey=CDS;gene=cotF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391933.1;locus_tag=NM058_00850;product=spore coat protein CotF;protein_id=UTX05420.1;transl_table=11 CP101611.1 Genbank gene 150876 151025 . + . ID=gene-NM058_00855;Name=NM058_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00855 CP101611.1 Protein Homology CDS 150876 151025 . + 0 ID=cds-UTX05421.1;Parent=gene-NM058_00855;Dbxref=NCBI_GP:UTX05421.1;Name=UTX05421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097802.1;locus_tag=NM058_00855;product=hypothetical protein;protein_id=UTX05421.1;transl_table=11 CP101611.1 Genbank pseudogene 151252 152180 . + . ID=gene-NM058_00860;Name=NM058_00860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_00860;pseudo=true CP101611.1 Protein Homology CDS 151252 152180 . + 0 ID=cds-NM058_00860;Parent=gene-NM058_00860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391932.1;locus_tag=NM058_00860;product=YybS family protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 152217 154195 . + . ID=gene-NM058_00865;Name=gdpP;gbkey=Gene;gene=gdpP;gene_biotype=pseudogene;locus_tag=NM058_00865;pseudo=true CP101611.1 Protein Homology CDS 152217 154195 . + 0 ID=cds-NM058_00865;Parent=gene-NM058_00865;Note=frameshifted;gbkey=CDS;gene=gdpP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391931.1;locus_tag=NM058_00865;product=cyclic-di-AMP phosphodiesterase GdpP;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 154192 154640 . + . ID=gene-NM058_00870;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=pseudogene;locus_tag=NM058_00870;pseudo=true CP101611.1 Protein Homology CDS 154192 154640 . + 0 ID=cds-NM058_00870;Parent=gene-NM058_00870;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR00158.1;locus_tag=NM058_00870;product=50S ribosomal protein L9;pseudo=true;transl_table=11 CP101611.1 Genbank gene 154676 156763 . - . ID=gene-NM058_00875;Name=NM058_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00875 CP101611.1 Protein Homology CDS 154676 156763 . - 0 ID=cds-UTX05422.1;Parent=gene-NM058_00875;Dbxref=NCBI_GP:UTX05422.1;Name=UTX05422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391929.2;locus_tag=NM058_00875;product=glycosyltransferase family 39 protein;protein_id=UTX05422.1;transl_table=11 CP101611.1 Genbank pseudogene 156880 158087 . - . ID=gene-NM058_00880;Name=NM058_00880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_00880;pseudo=true CP101611.1 Protein Homology CDS 156880 158087 . - 0 ID=cds-NM058_00880;Parent=gene-NM058_00880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391928.1;locus_tag=NM058_00880;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 158160 158303 . - . ID=gene-NM058_00885;Name=NM058_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00885 CP101611.1 Protein Homology CDS 158160 158303 . - 0 ID=cds-UTX05423.1;Parent=gene-NM058_00885;Dbxref=NCBI_GP:UTX05423.1;Name=UTX05423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236536.1;locus_tag=NM058_00885;product=YycC family protein;protein_id=UTX05423.1;transl_table=11 CP101611.1 Genbank gene 158424 158627 . + . ID=gene-NM058_00890;Name=NM058_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00890 CP101611.1 Protein Homology CDS 158424 158627 . + 0 ID=cds-UTX05424.1;Parent=gene-NM058_00890;Dbxref=NCBI_GP:UTX05424.1;Name=UTX05424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391926.1;locus_tag=NM058_00890;product=hypothetical protein;protein_id=UTX05424.1;transl_table=11 CP101611.1 Genbank gene 158675 158875 . - . ID=gene-NM058_00895;Name=NM058_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00895 CP101611.1 Protein Homology CDS 158675 158875 . - 0 ID=cds-UTX05425.1;Parent=gene-NM058_00895;Dbxref=NCBI_GP:UTX05425.1;Name=UTX05425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391925.1;locus_tag=NM058_00895;product=DUF2188 domain-containing protein;protein_id=UTX05425.1;transl_table=11 CP101611.1 Genbank gene 159044 160408 . + . ID=gene-NM058_00900;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=NM058_00900 CP101611.1 Protein Homology CDS 159044 160408 . + 0 ID=cds-UTX05426.1;Parent=gene-NM058_00900;Dbxref=NCBI_GP:UTX05426.1;Name=UTX05426.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391924.2;locus_tag=NM058_00900;product=replicative DNA helicase;protein_id=UTX05426.1;transl_table=11 CP101611.1 Genbank gene 160525 160944 . + . ID=gene-NM058_00905;Name=NM058_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00905 CP101611.1 Protein Homology CDS 160525 160944 . + 0 ID=cds-UTX05427.1;Parent=gene-NM058_00905;Dbxref=NCBI_GP:UTX05427.1;Name=UTX05427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391923.1;locus_tag=NM058_00905;product=VOC family protein;protein_id=UTX05427.1;transl_table=11 CP101611.1 Genbank gene 161150 162442 . + . ID=gene-NM058_00910;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=NM058_00910 CP101611.1 Protein Homology CDS 161150 162442 . + 0 ID=cds-UTX05428.1;Parent=gene-NM058_00910;Dbxref=NCBI_GP:UTX05428.1;Name=UTX05428.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391922.1;locus_tag=NM058_00910;product=adenylosuccinate synthase;protein_id=UTX05428.1;transl_table=11 CP101611.1 Genbank gene 162666 162741 . + . ID=gene-NM058_00915;Name=NM058_00915;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00915 CP101611.1 tRNAscan-SE tRNA 162666 162741 . + . ID=rna-NM058_00915;Parent=gene-NM058_00915;anticodon=(pos:162699..162701);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00915;product=tRNA-Lys CP101611.1 tRNAscan-SE exon 162666 162741 . + . ID=exon-NM058_00915-1;Parent=rna-NM058_00915;anticodon=(pos:162699..162701);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00915;product=tRNA-Lys CP101611.1 Genbank gene 162751 162822 . + . ID=gene-NM058_00920;Name=NM058_00920;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00920 CP101611.1 tRNAscan-SE tRNA 162751 162822 . + . ID=rna-NM058_00920;Parent=gene-NM058_00920;anticodon=(pos:162784..162786);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00920;product=tRNA-Glu CP101611.1 tRNAscan-SE exon 162751 162822 . + . ID=exon-NM058_00920-1;Parent=rna-NM058_00920;anticodon=(pos:162784..162786);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00920;product=tRNA-Glu CP101611.1 Genbank gene 162904 162980 . + . ID=gene-NM058_00925;Name=NM058_00925;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00925 CP101611.1 tRNAscan-SE tRNA 162904 162980 . + . ID=rna-NM058_00925;Parent=gene-NM058_00925;anticodon=(pos:162938..162940);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00925;product=tRNA-Asp CP101611.1 tRNAscan-SE exon 162904 162980 . + . ID=exon-NM058_00925-1;Parent=rna-NM058_00925;anticodon=(pos:162938..162940);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00925;product=tRNA-Asp CP101611.1 Genbank gene 163016 163088 . + . ID=gene-NM058_00930;Name=NM058_00930;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_00930 CP101611.1 tRNAscan-SE tRNA 163016 163088 . + . ID=rna-NM058_00930;Parent=gene-NM058_00930;anticodon=(pos:163049..163051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00930;product=tRNA-Phe CP101611.1 tRNAscan-SE exon 163016 163088 . + . ID=exon-NM058_00930-1;Parent=rna-NM058_00930;anticodon=(pos:163049..163051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_00930;product=tRNA-Phe CP101611.1 Genbank gene 163470 164177 . + . ID=gene-NM058_00935;Name=walR;gbkey=Gene;gene=walR;gene_biotype=protein_coding;locus_tag=NM058_00935 CP101611.1 Protein Homology CDS 163470 164177 . + 0 ID=cds-UTX06931.1;Parent=gene-NM058_00935;Dbxref=NCBI_GP:UTX06931.1;Name=UTX06931.1;gbkey=CDS;gene=walR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391921.1;locus_tag=NM058_00935;product=cell wall metabolism DNA-binding response regulator WalR;protein_id=UTX06931.1;transl_table=11 CP101611.1 Genbank pseudogene 164185 166019 . + . ID=gene-NM058_00940;Name=walK;gbkey=Gene;gene=walK;gene_biotype=pseudogene;locus_tag=NM058_00940;pseudo=true CP101611.1 Protein Homology CDS 164185 166019 . + 0 ID=cds-NM058_00940;Parent=gene-NM058_00940;Note=frameshifted;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016021;gbkey=CDS;gene=walK;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391920.1;locus_tag=NM058_00940;product=cell wall metabolism sensor histidine kinase WalK;pseudo=true;transl_table=11 CP101611.1 Genbank gene 166009 167376 . + . ID=gene-NM058_00945;Name=walH;gbkey=Gene;gene=walH;gene_biotype=protein_coding;gene_synonym=yycH;locus_tag=NM058_00945 CP101611.1 Protein Homology CDS 166009 167376 . + 0 ID=cds-UTX06932.1;Parent=gene-NM058_00945;Dbxref=NCBI_GP:UTX06932.1;Name=UTX06932.1;gbkey=CDS;gene=walH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391919.1;locus_tag=NM058_00945;product=WalRK two-component regulatory system regulator WalH;protein_id=UTX06932.1;transl_table=11 CP101611.1 Genbank gene 167363 168205 . + . ID=gene-NM058_00950;Name=walI;gbkey=Gene;gene=walI;gene_biotype=protein_coding;gene_synonym=yycY;locus_tag=NM058_00950 CP101611.1 Protein Homology CDS 167363 168205 . + 0 ID=cds-UTX05429.1;Parent=gene-NM058_00950;Dbxref=NCBI_GP:UTX05429.1;Name=UTX05429.1;gbkey=CDS;gene=walI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391918.1;locus_tag=NM058_00950;product=WalRK two-component regulatory system regulator WalI;protein_id=UTX05429.1;transl_table=11 CP101611.1 Genbank gene 168226 169020 . + . ID=gene-NM058_00955;Name=NM058_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00955 CP101611.1 Protein Homology CDS 168226 169020 . + 0 ID=cds-UTX05430.1;Parent=gene-NM058_00955;Dbxref=NCBI_GP:UTX05430.1;Name=UTX05430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391917.2;locus_tag=NM058_00955;product=MBL fold metallo-hydrolase;protein_id=UTX05430.1;transl_table=11 CP101611.1 Genbank gene 169102 170304 . + . ID=gene-NM058_00960;Name=htrC;gbkey=Gene;gene=htrC;gene_biotype=protein_coding;locus_tag=NM058_00960 CP101611.1 Protein Homology CDS 169102 170304 . + 0 ID=cds-UTX05431.1;Parent=gene-NM058_00960;Dbxref=NCBI_GP:UTX05431.1;Name=UTX05431.1;gbkey=CDS;gene=htrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391916.1;locus_tag=NM058_00960;product=serine protease HtrC;protein_id=UTX05431.1;transl_table=11 CP101611.1 Genbank pseudogene 170324 170447 . + . ID=gene-NM058_00965;Name=NM058_00965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_00965;pseudo=true CP101611.1 Protein Homology CDS 170324 170447 . + 0 ID=cds-NM058_00965;Parent=gene-NM058_00965;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009514013.1;locus_tag=NM058_00965;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 170450 170950 . - . ID=gene-NM058_00970;Name=NM058_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00970 CP101611.1 Protein Homology CDS 170450 170950 . - 0 ID=cds-UTX05432.1;Parent=gene-NM058_00970;Dbxref=NCBI_GP:UTX05432.1;Name=UTX05432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019260003.1;locus_tag=NM058_00970;product=PepSY domain-containing protein;protein_id=UTX05432.1;transl_table=11 CP101611.1 Genbank gene 171122 172021 . - . ID=gene-NM058_00975;Name=NM058_00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_00975 CP101611.1 Protein Homology CDS 171122 172021 . - 0 ID=cds-UTX05433.1;Parent=gene-NM058_00975;Dbxref=NCBI_GP:UTX05433.1;Name=UTX05433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019716338.1;locus_tag=NM058_00975;product=PepSY domain-containing protein;protein_id=UTX05433.1;transl_table=11 CP101611.1 Genbank pseudogene 172234 172916 . + . ID=gene-NM058_00980;Name=NM058_00980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_00980;pseudo=true CP101611.1 Protein Homology CDS 172234 172916 . + 0 ID=cds-NM058_00980;Parent=gene-NM058_00980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236510.1;locus_tag=NM058_00980;product=response regulator transcription factor;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 172913 174362 . + . ID=gene-NM058_00985;Name=NM058_00985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_00985;pseudo=true CP101611.1 Protein Homology CDS 172913 174362 . + 0 ID=cds-NM058_00985;Parent=gene-NM058_00985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014115837.1;locus_tag=NM058_00985;product=ATP-binding protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 174368 175753 . - . ID=gene-NM058_00990;Name=rocR;gbkey=Gene;gene=rocR;gene_biotype=protein_coding;locus_tag=NM058_00990 CP101611.1 Protein Homology CDS 174368 175753 . - 0 ID=cds-UTX05434.1;Parent=gene-NM058_00990;Dbxref=NCBI_GP:UTX05434.1;Name=UTX05434.1;gbkey=CDS;gene=rocR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391915.1;locus_tag=NM058_00990;product=arginine utilization regulatory protein RocR;protein_id=UTX05434.1;transl_table=11 CP101611.1 Genbank gene 175994 177199 . + . ID=gene-NM058_00995;Name=rocD;gbkey=Gene;gene=rocD;gene_biotype=protein_coding;locus_tag=NM058_00995 CP101611.1 Protein Homology CDS 175994 177199 . + 0 ID=cds-UTX05435.1;Parent=gene-NM058_00995;Dbxref=NCBI_GP:UTX05435.1;Name=UTX05435.1;gbkey=CDS;gene=rocD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391914.1;locus_tag=NM058_00995;product=ornithine aminotransferase;protein_id=UTX05435.1;transl_table=11 CP101611.1 Genbank gene 177423 178826 . + . ID=gene-NM058_01000;Name=NM058_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01000 CP101611.1 Protein Homology CDS 177423 178826 . + 0 ID=cds-UTX05436.1;Parent=gene-NM058_01000;Dbxref=NCBI_GP:UTX05436.1;Name=UTX05436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391913.1;locus_tag=NM058_01000;product=amino acid permease;protein_id=UTX05436.1;transl_table=11 CP101611.1 Genbank gene 178900 179790 . + . ID=gene-NM058_01005;Name=rocF;gbkey=Gene;gene=rocF;gene_biotype=protein_coding;locus_tag=NM058_01005 CP101611.1 Protein Homology CDS 178900 179790 . + 0 ID=cds-UTX05437.1;Parent=gene-NM058_01005;Dbxref=NCBI_GP:UTX05437.1;Name=UTX05437.1;Ontology_term=GO:0019547,GO:0004053;gbkey=CDS;gene=rocF;go_function=arginase activity|0004053||IEA;go_process=arginine catabolic process to ornithine|0019547||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391912.1;locus_tag=NM058_01005;product=arginase;protein_id=UTX05437.1;transl_table=11 CP101611.1 Genbank gene 179825 179941 . - . ID=gene-NM058_01010;Name=NM058_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01010 CP101611.1 Protein Homology CDS 179825 179941 . - 0 ID=cds-UTX05438.1;Parent=gene-NM058_01010;Dbxref=NCBI_GP:UTX05438.1;Name=UTX05438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391911.1;locus_tag=NM058_01010;product=Phr family secreted Rap phosphatase inhibitor;protein_id=UTX05438.1;transl_table=11 CP101611.1 Genbank gene 179942 181039 . - . ID=gene-NM058_01015;Name=rapG;gbkey=Gene;gene=rapG;gene_biotype=protein_coding;locus_tag=NM058_01015 CP101611.1 Protein Homology CDS 179942 181039 . - 0 ID=cds-UTX05439.1;Parent=gene-NM058_01015;Dbxref=NCBI_GP:UTX05439.1;Name=UTX05439.1;gbkey=CDS;gene=rapG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391910.1;locus_tag=NM058_01015;product=response regulator aspartate phosphatase RapG;protein_id=UTX05439.1;transl_table=11 CP101611.1 Genbank gene 181150 181620 . + . ID=gene-NM058_01020;Name=NM058_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01020 CP101611.1 Protein Homology CDS 181150 181620 . + 0 ID=cds-UTX05440.1;Parent=gene-NM058_01020;Dbxref=NCBI_GP:UTX05440.1;Name=UTX05440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391909.1;locus_tag=NM058_01020;product=GNAT family N-acetyltransferase;protein_id=UTX05440.1;transl_table=11 CP101611.1 Genbank gene 181776 182513 . + . ID=gene-NM058_01025;Name=NM058_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01025 CP101611.1 Protein Homology CDS 181776 182513 . + 0 ID=cds-UTX05441.1;Parent=gene-NM058_01025;Dbxref=NCBI_GP:UTX05441.1;Name=UTX05441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391908.1;locus_tag=NM058_01025;product=hypothetical protein;protein_id=UTX05441.1;transl_table=11 CP101611.1 Genbank pseudogene 182524 183686 . + . ID=gene-NM058_01030;Name=NM058_01030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01030;pseudo=true CP101611.1 Protein Homology CDS 182524 183686 . + 0 ID=cds-NM058_01030;Parent=gene-NM058_01030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391907.2;locus_tag=NM058_01030;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 183829 183942 . + . ID=gene-NM058_01035;Name=NM058_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01035 CP101611.1 Protein Homology CDS 183829 183942 . + 0 ID=cds-UTX05442.1;Parent=gene-NM058_01035;Dbxref=NCBI_GP:UTX05442.1;Name=UTX05442.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022308.2;locus_tag=NM058_01035;product=DUF2651 family protein;protein_id=UTX05442.1;transl_table=11 CP101611.1 Genbank gene 184121 184291 . + . ID=gene-NM058_01040;Name=NM058_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01040 CP101611.1 Protein Homology CDS 184121 184291 . + 0 ID=cds-UTX05443.1;Parent=gene-NM058_01040;Dbxref=NCBI_GP:UTX05443.1;Name=UTX05443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097801.1;locus_tag=NM058_01040;product=hypothetical protein;protein_id=UTX05443.1;transl_table=11 CP101611.1 Genbank pseudogene 184354 185578 . + . ID=gene-NM058_01045;Name=fdhA;gbkey=Gene;gene=fdhA;gene_biotype=pseudogene;locus_tag=NM058_01045;pseudo=true CP101611.1 Protein Homology CDS 184354 185578 . + 0 ID=cds-NM058_01045;Parent=gene-NM058_01045;Note=frameshifted;Ontology_term=GO:0046292,GO:0018467;gbkey=CDS;gene=fdhA;go_function=formaldehyde dehydrogenase activity|0018467||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391905.1;locus_tag=NM058_01045;product=formaldehyde dehydrogenase%2C glutathione-independent;pseudo=true;transl_table=11 CP101611.1 Genbank gene 185612 186025 . - . ID=gene-NM058_01050;Name=NM058_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01050 CP101611.1 Protein Homology CDS 185612 186025 . - 0 ID=cds-UTX05444.1;Parent=gene-NM058_01050;Dbxref=NCBI_GP:UTX05444.1;Name=UTX05444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391904.1;locus_tag=NM058_01050;product=hypothetical protein;protein_id=UTX05444.1;transl_table=11 CP101611.1 Genbank gene 186210 186380 . + . ID=gene-NM058_01055;Name=NM058_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01055 CP101611.1 Protein Homology CDS 186210 186380 . + 0 ID=cds-UTX05445.1;Parent=gene-NM058_01055;Dbxref=NCBI_GP:UTX05445.1;Name=UTX05445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097800.1;locus_tag=NM058_01055;product=CxxH/CxxC protein;protein_id=UTX05445.1;transl_table=11 CP101611.1 Genbank gene 186461 186940 . + . ID=gene-NM058_01060;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=NM058_01060 CP101611.1 Protein Homology CDS 186461 186940 . + 0 ID=cds-UTX05446.1;Parent=gene-NM058_01060;Dbxref=NCBI_GP:UTX05446.1;Name=UTX05446.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391903.1;locus_tag=NM058_01060;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=UTX05446.1;transl_table=11 CP101611.1 Genbank gene 187231 190935 . + . ID=gene-NM058_01065;Name=NM058_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01065 CP101611.1 Protein Homology CDS 187231 190935 . + 0 ID=cds-UTX05447.1;Parent=gene-NM058_01065;Dbxref=NCBI_GP:UTX05447.1;Name=UTX05447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015240936.1;locus_tag=NM058_01065;product=ATP-binding protein;protein_id=UTX05447.1;transl_table=11 CP101611.1 Genbank gene 191186 194224 . + . ID=gene-NM058_01070;Name=NM058_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01070 CP101611.1 Protein Homology CDS 191186 194224 . + 0 ID=cds-UTX05448.1;Parent=gene-NM058_01070;Dbxref=NCBI_GP:UTX05448.1;Name=UTX05448.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF016724.2;locus_tag=NM058_01070;product=DEAD/DEAH box helicase family protein;protein_id=UTX05448.1;transl_table=11 CP101611.1 Genbank pseudogene 195234 197157 . - . ID=gene-NM058_01075;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=pseudogene;locus_tag=NM058_01075;pseudo=true CP101611.1 Protein Homology CDS 195234 197157 . - 0 ID=cds-NM058_01075;Parent=gene-NM058_01075;Note=frameshifted;gbkey=CDS;gene=fbp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391899.2;locus_tag=NM058_01075;product=fructose-1%2C6-bisphosphatase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 197453 198163 . - . ID=gene-NM058_01080;Name=NM058_01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01080 CP101611.1 Protein Homology CDS 197453 198163 . - 0 ID=cds-UTX05449.1;Parent=gene-NM058_01080;Dbxref=NCBI_GP:UTX05449.1;Name=UTX05449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391893.1;locus_tag=NM058_01080;product=GntR family transcriptional regulator;protein_id=UTX05449.1;transl_table=11 CP101611.1 Genbank gene 198321 200189 . + . ID=gene-NM058_01085;Name=NM058_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01085 CP101611.1 Protein Homology CDS 198321 200189 . + 0 ID=cds-UTX05450.1;Parent=gene-NM058_01085;Dbxref=NCBI_GP:UTX05450.1;Name=UTX05450.1;Ontology_term=GO:0009401,GO:0015759,GO:0015573;gbkey=CDS;go_function=beta-glucoside transmembrane transporter activity|0015573||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,beta-glucoside transport|0015759||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236458.1;locus_tag=NM058_01085;product=beta-glucoside-specific PTS transporter subunit IIABC;protein_id=UTX05450.1;transl_table=11 CP101611.1 Genbank gene 200203 201642 . + . ID=gene-NM058_01090;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=NM058_01090 CP101611.1 Protein Homology CDS 200203 201642 . + 0 ID=cds-UTX05451.1;Parent=gene-NM058_01090;Dbxref=NCBI_GP:UTX05451.1;Name=UTX05451.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391891.1;locus_tag=NM058_01090;product=6-phospho-beta-glucosidase BglA;protein_id=UTX05451.1;transl_table=11 CP101611.1 Genbank gene 201925 203277 . + . ID=gene-NM058_01095;Name=NM058_01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01095 CP101611.1 Protein Homology CDS 201925 203277 . + 0 ID=cds-UTX05452.1;Parent=gene-NM058_01095;Dbxref=NCBI_GP:UTX05452.1;Name=UTX05452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014115810.1;locus_tag=NM058_01095;product=polysaccharide pyruvyl transferase family protein;protein_id=UTX05452.1;transl_table=11 CP101611.1 Genbank gene 203388 204917 . - . ID=gene-NM058_01100;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=NM058_01100 CP101611.1 Protein Homology CDS 203388 204917 . - 0 ID=cds-UTX05453.1;Parent=gene-NM058_01100;Dbxref=NCBI_GP:UTX05453.1;Name=UTX05453.1;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391890.1;locus_tag=NM058_01100;product=alkyl hydroperoxide reductase subunit F;protein_id=UTX05453.1;transl_table=11 CP101611.1 Genbank gene 204931 205494 . - . ID=gene-NM058_01105;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=NM058_01105 CP101611.1 Protein Homology CDS 204931 205494 . - 0 ID=cds-UTX05454.1;Parent=gene-NM058_01105;Dbxref=NCBI_GP:UTX05454.1;Name=UTX05454.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=alkylhydroperoxide reductase activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391889.1;locus_tag=NM058_01105;product=alkyl hydroperoxide reductase subunit C;protein_id=UTX05454.1;transl_table=11 CP101611.1 Genbank gene 205980 207386 . - . ID=gene-NM058_01110;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=NM058_01110 CP101611.1 Protein Homology CDS 205980 207386 . - 0 ID=cds-UTX05455.1;Parent=gene-NM058_01110;Dbxref=NCBI_GP:UTX05455.1;Name=UTX05455.1;Ontology_term=GO:0006098,GO:0004616,GO:0005737;gbkey=CDS;gene=gnd;go_component=cytoplasm|0005737||IEA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391888.1;locus_tag=NM058_01110;product=decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase;protein_id=UTX05455.1;transl_table=11 CP101611.1 Genbank pseudogene 207410 208755 . - . ID=gene-NM058_01115;Name=gntP;gbkey=Gene;gene=gntP;gene_biotype=pseudogene;locus_tag=NM058_01115;pseudo=true CP101611.1 Protein Homology CDS 207410 208755 . - 0 ID=cds-NM058_01115;Parent=gene-NM058_01115;Note=frameshifted;gbkey=CDS;gene=gntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391887.1;locus_tag=NM058_01115;product=gluconate permease GntP;pseudo=true;transl_table=11 CP101611.1 Genbank gene 208784 210325 . - . ID=gene-NM058_01120;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=NM058_01120 CP101611.1 Protein Homology CDS 208784 210325 . - 0 ID=cds-UTX05456.1;Parent=gene-NM058_01120;Dbxref=NCBI_GP:UTX05456.1;Name=UTX05456.1;Ontology_term=GO:0009255,GO:0019200;gbkey=CDS;gene=gntK;go_function=carbohydrate kinase activity|0019200||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019716308.1;locus_tag=NM058_01120;product=gluconokinase;protein_id=UTX05456.1;transl_table=11 CP101611.1 Genbank gene 210318 211049 . - . ID=gene-NM058_01125;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=NM058_01125 CP101611.1 Protein Homology CDS 210318 211049 . - 0 ID=cds-UTX05457.1;Parent=gene-NM058_01125;Dbxref=NCBI_GP:UTX05457.1;Name=UTX05457.1;gbkey=CDS;gene=gntR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391885.1;locus_tag=NM058_01125;product=gluconate operon transcriptional repressor GntR;protein_id=UTX05457.1;transl_table=11 CP101611.1 Genbank gene 211246 212394 . + . ID=gene-NM058_01130;Name=NM058_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01130 CP101611.1 Protein Homology CDS 211246 212394 . + 0 ID=cds-UTX05458.1;Parent=gene-NM058_01130;Dbxref=NCBI_GP:UTX05458.1;Name=UTX05458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391884.2;locus_tag=NM058_01130;product=glycerate kinase;protein_id=UTX05458.1;transl_table=11 CP101611.1 Genbank gene 212488 213519 . + . ID=gene-NM058_01135;Name=NM058_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01135 CP101611.1 Protein Homology CDS 212488 213519 . + 0 ID=cds-UTX05459.1;Parent=gene-NM058_01135;Dbxref=NCBI_GP:UTX05459.1;Name=UTX05459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391883.3;locus_tag=NM058_01135;product=polysaccharide pyruvyl transferase family protein;protein_id=UTX05459.1;transl_table=11 CP101611.1 Genbank gene 213565 213975 . - . ID=gene-NM058_01140;Name=NM058_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01140 CP101611.1 Protein Homology CDS 213565 213975 . - 0 ID=cds-UTX05460.1;Parent=gene-NM058_01140;Dbxref=NCBI_GP:UTX05460.1;Name=UTX05460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010332560.1;locus_tag=NM058_01140;product=hypothetical protein;protein_id=UTX05460.1;transl_table=11 CP101611.1 Genbank gene 213990 215456 . - . ID=gene-NM058_01145;Name=NM058_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01145 CP101611.1 Protein Homology CDS 213990 215456 . - 0 ID=cds-UTX05461.1;Parent=gene-NM058_01145;Dbxref=NCBI_GP:UTX05461.1;Name=UTX05461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010332559.1;locus_tag=NM058_01145;product=DUF2974 domain-containing protein;protein_id=UTX05461.1;transl_table=11 CP101611.1 Genbank gene 215643 216029 . + . ID=gene-NM058_01150;Name=NM058_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01150 CP101611.1 Protein Homology CDS 215643 216029 . + 0 ID=cds-UTX05462.1;Parent=gene-NM058_01150;Dbxref=NCBI_GP:UTX05462.1;Name=UTX05462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012011799.1;locus_tag=NM058_01150;product=DUF1433 domain-containing protein;protein_id=UTX05462.1;transl_table=11 CP101611.1 Genbank gene 216123 216815 . - . ID=gene-NM058_01155;Name=NM058_01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01155 CP101611.1 Protein Homology CDS 216123 216815 . - 0 ID=cds-UTX05463.1;Parent=gene-NM058_01155;Dbxref=NCBI_GP:UTX05463.1;Name=UTX05463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391882.3;locus_tag=NM058_01155;product=LrgB family protein;protein_id=UTX05463.1;transl_table=11 CP101611.1 Genbank gene 216785 217189 . - . ID=gene-NM058_01160;Name=NM058_01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01160 CP101611.1 Protein Homology CDS 216785 217189 . - 0 ID=cds-UTX05464.1;Parent=gene-NM058_01160;Dbxref=NCBI_GP:UTX05464.1;Name=UTX05464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097798.1;locus_tag=NM058_01160;product=CidA/LrgA family holin-like protein;protein_id=UTX05464.1;transl_table=11 CP101611.1 Genbank gene 217413 217844 . + . ID=gene-NM058_01165;Name=NM058_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01165 CP101611.1 Protein Homology CDS 217413 217844 . + 0 ID=cds-UTX05465.1;Parent=gene-NM058_01165;Dbxref=NCBI_GP:UTX05465.1;Name=UTX05465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391881.1;locus_tag=NM058_01165;product=MarR family transcriptional regulator;protein_id=UTX05465.1;transl_table=11 CP101611.1 Genbank gene 217893 218966 . - . ID=gene-NM058_01170;Name=NM058_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01170 CP101611.1 Protein Homology CDS 217893 218966 . - 0 ID=cds-UTX05466.1;Parent=gene-NM058_01170;Dbxref=NCBI_GP:UTX05466.1;Name=UTX05466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391880.2;locus_tag=NM058_01170;product=SDR family oxidoreductase;protein_id=UTX05466.1;transl_table=11 CP101611.1 Genbank gene 219096 219671 . + . ID=gene-NM058_01175;Name=yxaF;gbkey=Gene;gene=yxaF;gene_biotype=protein_coding;locus_tag=NM058_01175 CP101611.1 Protein Homology CDS 219096 219671 . + 0 ID=cds-UTX05467.1;Parent=gene-NM058_01175;Dbxref=NCBI_GP:UTX05467.1;Name=UTX05467.1;gbkey=CDS;gene=yxaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391879.2;locus_tag=NM058_01175;product=transcriptional regulator YxaF;protein_id=UTX05467.1;transl_table=11 CP101611.1 Genbank pseudogene 219764 220776 . + . ID=gene-NM058_01180;Name=NM058_01180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01180;pseudo=true CP101611.1 Protein Homology CDS 219764 220776 . + 0 ID=cds-NM058_01180;Parent=gene-NM058_01180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391878.2;locus_tag=NM058_01180;product=quercetin 2%2C3-dioxygenase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 220882 222088 . + . ID=gene-NM058_01185;Name=NM058_01185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01185;pseudo=true CP101611.1 Protein Homology CDS 220882 222088 . + 0 ID=cds-NM058_01185;Parent=gene-NM058_01185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391877.2;locus_tag=NM058_01185;product=DUF418 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 222118 222573 . - . ID=gene-NM058_01190;Name=NM058_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01190 CP101611.1 Protein Homology CDS 222118 222573 . - 0 ID=cds-UTX05468.1;Parent=gene-NM058_01190;Dbxref=NCBI_GP:UTX05468.1;Name=UTX05468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391876.1;locus_tag=NM058_01190;product=RDD family protein;protein_id=UTX05468.1;transl_table=11 CP101611.1 Genbank gene 222729 223109 . + . ID=gene-NM058_01195;Name=NM058_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01195 CP101611.1 Protein Homology CDS 222729 223109 . + 0 ID=cds-UTX05469.1;Parent=gene-NM058_01195;Dbxref=NCBI_GP:UTX05469.1;Name=UTX05469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236424.1;locus_tag=NM058_01195;product=MerR family transcriptional regulator;protein_id=UTX05469.1;transl_table=11 CP101611.1 Genbank pseudogene 223189 224129 . + . ID=gene-NM058_01200;Name=NM058_01200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01200;pseudo=true CP101611.1 Protein Homology CDS 223189 224129 . + 0 ID=cds-NM058_01200;Parent=gene-NM058_01200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236423.1;locus_tag=NM058_01200;product=aldo/keto reductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 224252 224677 . + . ID=gene-NM058_01205;Name=NM058_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01205 CP101611.1 Protein Homology CDS 224252 224677 . + 0 ID=cds-UTX05470.1;Parent=gene-NM058_01205;Dbxref=NCBI_GP:UTX05470.1;Name=UTX05470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003219064.1;locus_tag=NM058_01205;product=DUF5391 domain-containing protein;protein_id=UTX05470.1;transl_table=11 CP101611.1 Genbank gene 225091 226428 . - . ID=gene-NM058_01210;Name=NM058_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01210 CP101611.1 Protein Homology CDS 225091 226428 . - 0 ID=cds-UTX05471.1;Parent=gene-NM058_01210;Dbxref=NCBI_GP:UTX05471.1;Name=UTX05471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391865.2;locus_tag=NM058_01210;product=aldehyde dehydrogenase family protein;protein_id=UTX05471.1;transl_table=11 CP101611.1 Genbank pseudogene 226571 227712 . + . ID=gene-NM058_01215;Name=NM058_01215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01215;pseudo=true CP101611.1 Protein Homology CDS 226571 227712 . + 0 ID=cds-NM058_01215;Parent=gene-NM058_01215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391864.1;locus_tag=NM058_01215;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank gene 227741 228562 . - . ID=gene-NM058_01220;Name=NM058_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01220 CP101611.1 Protein Homology CDS 227741 228562 . - 0 ID=cds-UTX05472.1;Parent=gene-NM058_01220;Dbxref=NCBI_GP:UTX05472.1;Name=UTX05472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391863.2;locus_tag=NM058_01220;product=SDR family oxidoreductase;protein_id=UTX05472.1;transl_table=11 CP101611.1 Genbank gene 228680 228952 . + . ID=gene-NM058_01225;Name=NM058_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01225 CP101611.1 Protein Homology CDS 228680 228952 . + 0 ID=cds-UTX06933.1;Parent=gene-NM058_01225;Dbxref=NCBI_GP:UTX06933.1;Name=UTX06933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391862.1;locus_tag=NM058_01225;product=hypothetical protein;protein_id=UTX06933.1;transl_table=11 CP101611.1 Genbank gene 229105 230985 . + . ID=gene-NM058_01230;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=NM058_01230 CP101611.1 Protein Homology CDS 229105 230985 . + 0 ID=cds-UTX05473.1;Parent=gene-NM058_01230;Dbxref=NCBI_GP:UTX05473.1;Name=UTX05473.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391861.1;locus_tag=NM058_01230;product=molecular chaperone HtpG;protein_id=UTX05473.1;transl_table=11 CP101611.1 Genbank pseudogene 231026 232410 . - . ID=gene-NM058_01235;Name=NM058_01235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01235;pseudo=true CP101611.1 Protein Homology CDS 231026 232410 . - 0 ID=cds-NM058_01235;Parent=gene-NM058_01235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391860.1;locus_tag=NM058_01235;product=sugar porter family MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 232529 233017 . - . ID=gene-NM058_01240;Name=NM058_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01240 CP101611.1 Protein Homology CDS 232529 233017 . - 0 ID=cds-UTX06934.1;Parent=gene-NM058_01240;Dbxref=NCBI_GP:UTX06934.1;Name=UTX06934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014418660.1;locus_tag=NM058_01240;product=HPP family protein;protein_id=UTX06934.1;transl_table=11 CP101611.1 Genbank gene 233152 233718 . - . ID=gene-NM058_01245;Name=NM058_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01245 CP101611.1 Protein Homology CDS 233152 233718 . - 0 ID=cds-UTX05474.1;Parent=gene-NM058_01245;Dbxref=NCBI_GP:UTX05474.1;Name=UTX05474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259958.1;locus_tag=NM058_01245;product=CGNR zinc finger domain-containing protein;protein_id=UTX05474.1;transl_table=11 CP101611.1 Genbank gene 233797 234267 . + . ID=gene-NM058_01250;Name=NM058_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01250 CP101611.1 Protein Homology CDS 233797 234267 . + 0 ID=cds-UTX05475.1;Parent=gene-NM058_01250;Dbxref=NCBI_GP:UTX05475.1;Name=UTX05475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014666029.1;locus_tag=NM058_01250;product=hypothetical protein;protein_id=UTX05475.1;transl_table=11 CP101611.1 Genbank gene 234422 235639 . + . ID=gene-NM058_01255;Name=NM058_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01255 CP101611.1 Protein Homology CDS 234422 235639 . + 0 ID=cds-UTX05476.1;Parent=gene-NM058_01255;Dbxref=NCBI_GP:UTX05476.1;Name=UTX05476.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010630609.1;locus_tag=NM058_01255;product=MFS transporter;protein_id=UTX05476.1;transl_table=11 CP101611.1 Genbank gene 235682 235990 . - . ID=gene-NM058_01260;Name=NM058_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01260 CP101611.1 Protein Homology CDS 235682 235990 . - 0 ID=cds-UTX05477.1;Parent=gene-NM058_01260;Dbxref=NCBI_GP:UTX05477.1;Name=UTX05477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391859.1;locus_tag=NM058_01260;product=YxcD family protein;protein_id=UTX05477.1;transl_table=11 CP101611.1 Genbank gene 235994 236644 . - . ID=gene-NM058_01265;Name=NM058_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01265 CP101611.1 Protein Homology CDS 235994 236644 . - 0 ID=cds-UTX05478.1;Parent=gene-NM058_01265;Dbxref=NCBI_GP:UTX05478.1;Name=UTX05478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391858.1;locus_tag=NM058_01265;product=hypothetical protein;protein_id=UTX05478.1;transl_table=11 CP101611.1 Genbank gene 236954 237886 . - . ID=gene-NM058_01270;Name=NM058_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01270 CP101611.1 Protein Homology CDS 236954 237886 . - 0 ID=cds-UTX05479.1;Parent=gene-NM058_01270;Dbxref=NCBI_GP:UTX05479.1;Name=UTX05479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391857.1;locus_tag=NM058_01270;product=aldo/keto reductase;protein_id=UTX05479.1;transl_table=11 CP101611.1 Genbank gene 237940 238695 . - . ID=gene-NM058_01275;Name=iolR;gbkey=Gene;gene=iolR;gene_biotype=protein_coding;locus_tag=NM058_01275 CP101611.1 Protein Homology CDS 237940 238695 . - 0 ID=cds-UTX05480.1;Parent=gene-NM058_01275;Dbxref=NCBI_GP:UTX05480.1;Name=UTX05480.1;gbkey=CDS;gene=iolR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391856.1;locus_tag=NM058_01275;product=myo-inositol utilization transcriptional regulator IolR;protein_id=UTX05480.1;transl_table=11 CP101611.1 Genbank gene 239116 240579 . + . ID=gene-NM058_01280;Name=iolA;gbkey=Gene;gene=iolA;gene_biotype=protein_coding;locus_tag=NM058_01280 CP101611.1 Protein Homology CDS 239116 240579 . + 0 ID=cds-UTX05481.1;Parent=gene-NM058_01280;Dbxref=NCBI_GP:UTX05481.1;Name=UTX05481.1;gbkey=CDS;gene=iolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391855.1;locus_tag=NM058_01280;product=methylmalonate-semialdehyde dehydrogenase;protein_id=UTX05481.1;transl_table=11 CP101611.1 Genbank gene 240654 241469 . + . ID=gene-NM058_01285;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=NM058_01285 CP101611.1 Protein Homology CDS 240654 241469 . + 0 ID=cds-UTX05482.1;Parent=gene-NM058_01285;Dbxref=NCBI_GP:UTX05482.1;Name=UTX05482.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391854.2;locus_tag=NM058_01285;product=5-deoxy-glucuronate isomerase;protein_id=UTX05482.1;transl_table=11 CP101611.1 Genbank gene 241493 242470 . + . ID=gene-NM058_01290;Name=iolC;gbkey=Gene;gene=iolC;gene_biotype=protein_coding;locus_tag=NM058_01290 CP101611.1 Protein Homology CDS 241493 242470 . + 0 ID=cds-UTX05483.1;Parent=gene-NM058_01290;Dbxref=NCBI_GP:UTX05483.1;Name=UTX05483.1;Ontology_term=GO:0019310,GO:0047590;gbkey=CDS;gene=iolC;go_function=5-dehydro-2-deoxygluconokinase activity|0047590||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391853.1;locus_tag=NM058_01290;product=5-dehydro-2-deoxygluconokinase;protein_id=UTX05483.1;transl_table=11 CP101611.1 Genbank pseudogene 242503 244415 . + . ID=gene-NM058_01295;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=pseudogene;locus_tag=NM058_01295;pseudo=true CP101611.1 Protein Homology CDS 242503 244415 . + 0 ID=cds-NM058_01295;Parent=gene-NM058_01295;Note=frameshifted;Ontology_term=GO:0019310,GO:0000287,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=magnesium ion binding|0000287||IEA,hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391852.2;locus_tag=NM058_01295;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 244431 245322 . + . ID=gene-NM058_01300;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=pseudogene;locus_tag=NM058_01300;pseudo=true CP101611.1 Protein Homology CDS 244431 245322 . + 0 ID=cds-NM058_01300;Parent=gene-NM058_01300;Note=frameshifted;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391851.1;locus_tag=NM058_01300;product=myo-inosose-2 dehydratase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 245337 246653 . + . ID=gene-NM058_01305;Name=iolF;gbkey=Gene;gene=iolF;gene_biotype=protein_coding;locus_tag=NM058_01305 CP101611.1 Protein Homology CDS 245337 246653 . + 0 ID=cds-UTX05484.1;Parent=gene-NM058_01305;Dbxref=NCBI_GP:UTX05484.1;Name=UTX05484.1;gbkey=CDS;gene=iolF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391850.2;locus_tag=NM058_01305;product=myo-inositol transporter IolF;protein_id=UTX05484.1;transl_table=11 CP101611.1 Genbank gene 246676 247710 . + . ID=gene-NM058_01310;Name=iolG;gbkey=Gene;gene=iolG;gene_biotype=protein_coding;locus_tag=NM058_01310 CP101611.1 Protein Homology CDS 246676 247710 . + 0 ID=cds-UTX05485.1;Parent=gene-NM058_01310;Dbxref=NCBI_GP:UTX05485.1;Name=UTX05485.1;gbkey=CDS;gene=iolG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391849.2;locus_tag=NM058_01310;product=bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase;protein_id=UTX05485.1;transl_table=11 CP101611.1 Genbank gene 247729 248598 . + . ID=gene-NM058_01315;Name=NM058_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01315 CP101611.1 Protein Homology CDS 247729 248598 . + 0 ID=cds-UTX05486.1;Parent=gene-NM058_01315;Dbxref=NCBI_GP:UTX05486.1;Name=UTX05486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391848.1;locus_tag=NM058_01315;product=sugar phosphate isomerase/epimerase;protein_id=UTX05486.1;transl_table=11 CP101611.1 Genbank gene 248685 249521 . + . ID=gene-NM058_01320;Name=iolI;gbkey=Gene;gene=iolI;gene_biotype=protein_coding;locus_tag=NM058_01320 CP101611.1 Protein Homology CDS 248685 249521 . + 0 ID=cds-UTX05487.1;Parent=gene-NM058_01320;Dbxref=NCBI_GP:UTX05487.1;Name=UTX05487.1;gbkey=CDS;gene=iolI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391847.1;locus_tag=NM058_01320;product=2-keto-myo-inositol isomerase;protein_id=UTX05487.1;transl_table=11 CP101611.1 Genbank gene 249542 250414 . + . ID=gene-NM058_01325;Name=iolJ;gbkey=Gene;gene=iolJ;gene_biotype=protein_coding;locus_tag=NM058_01325 CP101611.1 Protein Homology CDS 249542 250414 . + 0 ID=cds-UTX05488.1;Parent=gene-NM058_01325;Dbxref=NCBI_GP:UTX05488.1;Name=UTX05488.1;gbkey=CDS;gene=iolJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391846.1;locus_tag=NM058_01325;product=6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase;protein_id=UTX05488.1;transl_table=11 CP101611.1 Genbank gene 250522 251211 . + . ID=gene-NM058_01330;Name=yxdJ;gbkey=Gene;gene=yxdJ;gene_biotype=protein_coding;gene_synonym=tpeJ;locus_tag=NM058_01330 CP101611.1 Protein Homology CDS 250522 251211 . + 0 ID=cds-UTX05489.1;Parent=gene-NM058_01330;Dbxref=NCBI_GP:UTX05489.1;Name=UTX05489.1;gbkey=CDS;gene=yxdJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391845.1;locus_tag=NM058_01330;product=two-component system response regulator YxdJ;protein_id=UTX05489.1;transl_table=11 CP101611.1 Genbank pseudogene 251208 252186 . + . ID=gene-NM058_01335;Name=yxdK;gbkey=Gene;gene=yxdK;gene_biotype=pseudogene;gene_synonym=tpeK;locus_tag=NM058_01335;pseudo=true CP101611.1 Protein Homology CDS 251208 252186 . + 0 ID=cds-NM058_01335;Parent=gene-NM058_01335;Note=frameshifted;gbkey=CDS;gene=yxdK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391844.1;locus_tag=NM058_01335;product=two-component system sensor histidine kinase YxdK;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 252330 253102 . + . ID=gene-NM058_01340;Name=yxdL;gbkey=Gene;gene=yxdL;gene_biotype=pseudogene;gene_synonym=tpeL;locus_tag=NM058_01340;pseudo=true CP101611.1 Protein Homology CDS 252330 253102 . + 0 ID=cds-NM058_01340;Parent=gene-NM058_01340;Note=frameshifted;gbkey=CDS;gene=yxdL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391843.2;locus_tag=NM058_01340;product=ABC transporter ATP-binding protein YxdL;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 253077 254944 . + . ID=gene-NM058_01345;Name=yxdM;gbkey=Gene;gene=yxdM;gene_biotype=pseudogene;gene_synonym=tpeM;locus_tag=NM058_01345;pseudo=true CP101611.1 Protein Homology CDS 253077 254944 . + 0 ID=cds-NM058_01345;Parent=gene-NM058_01345;Note=frameshifted;gbkey=CDS;gene=yxdM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391842.2;locus_tag=NM058_01345;product=ABC transporter permease YxdM;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 254958 255302 . + . ID=gene-NM058_01350;Name=NM058_01350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01350;pseudo=true CP101611.1 Protein Homology CDS 254958 255302 . + 0 ID=cds-NM058_01350;Parent=gene-NM058_01350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391841.1;locus_tag=NM058_01350;product=YxeA family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 255343 256308 . - . ID=gene-NM058_01355;Name=NM058_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01355 CP101611.1 Protein Homology CDS 255343 256308 . - 0 ID=cds-UTX05490.1;Parent=gene-NM058_01355;Dbxref=NCBI_GP:UTX05490.1;Name=UTX05490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391840.2;locus_tag=NM058_01355;product=iron-hydroxamate ABC transporter substrate-binding protein;protein_id=UTX05490.1;transl_table=11 CP101611.1 Genbank gene 256485 256883 . + . ID=gene-NM058_01360;Name=NM058_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01360 CP101611.1 Protein Homology CDS 256485 256883 . + 0 ID=cds-UTX05491.1;Parent=gene-NM058_01360;Dbxref=NCBI_GP:UTX05491.1;Name=UTX05491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391839.2;locus_tag=NM058_01360;product=hypothetical protein;protein_id=UTX05491.1;transl_table=11 CP101611.1 Genbank gene 256926 257279 . - . ID=gene-NM058_01365;Name=NM058_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01365 CP101611.1 Protein Homology CDS 256926 257279 . - 0 ID=cds-UTX05492.1;Parent=gene-NM058_01365;Dbxref=NCBI_GP:UTX05492.1;Name=UTX05492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391838.2;locus_tag=NM058_01365;product=hypothetical protein;protein_id=UTX05492.1;transl_table=11 CP101611.1 Genbank gene 257526 257891 . - . ID=gene-NM058_01370;Name=cotNE;gbkey=Gene;gene=cotNE;gene_biotype=protein_coding;gene_synonym=yxeE;locus_tag=NM058_01370 CP101611.1 Protein Homology CDS 257526 257891 . - 0 ID=cds-UTX05493.1;Parent=gene-NM058_01370;Dbxref=NCBI_GP:UTX05493.1;Name=UTX05493.1;gbkey=CDS;gene=cotNE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391837.1;locus_tag=NM058_01370;product=inner spore coat protein CotNE;protein_id=UTX05493.1;transl_table=11 CP101611.1 Genbank gene 258050 258418 . + . ID=gene-NM058_01375;Name=NM058_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01375 CP101611.1 Protein Homology CDS 258050 258418 . + 0 ID=cds-UTX06935.1;Parent=gene-NM058_01375;Dbxref=NCBI_GP:UTX06935.1;Name=UTX06935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010332510.1;locus_tag=NM058_01375;product=YxeF family protein;protein_id=UTX06935.1;transl_table=11 CP101611.1 Genbank gene 258408 258968 . + . ID=gene-NM058_01380;Name=NM058_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01380 CP101611.1 Protein Homology CDS 258408 258968 . + 0 ID=cds-UTX05494.1;Parent=gene-NM058_01380;Dbxref=NCBI_GP:UTX05494.1;Name=UTX05494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391835.1;locus_tag=NM058_01380;product=hypothetical protein;protein_id=UTX05494.1;transl_table=11 CP101611.1 Genbank gene 259008 259817 . + . ID=gene-NM058_01385;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=NM058_01385 CP101611.1 Protein Homology CDS 259008 259817 . + 0 ID=cds-UTX05495.1;Parent=gene-NM058_01385;Dbxref=NCBI_GP:UTX05495.1;Name=UTX05495.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391834.1;locus_tag=NM058_01385;product=sugar-phosphatase;protein_id=UTX05495.1;transl_table=11 CP101611.1 Genbank pseudogene 260127 261112 . + . ID=gene-NM058_01390;Name=NM058_01390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01390;pseudo=true CP101611.1 Protein Homology CDS 260127 261112 . + 0 ID=cds-NM058_01390;Parent=gene-NM058_01390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391833.2;locus_tag=NM058_01390;product=choloylglycine hydrolase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 261556 262881 . + . ID=gene-NM058_01395;Name=NM058_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01395 CP101611.1 Protein Homology CDS 261556 262881 . + 0 ID=cds-UTX05496.1;Parent=gene-NM058_01395;Dbxref=NCBI_GP:UTX05496.1;Name=UTX05496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391831.1;locus_tag=NM058_01395;product=LLM class flavin-dependent oxidoreductase;protein_id=UTX05496.1;transl_table=11 CP101611.1 Genbank gene 262895 263392 . + . ID=gene-NM058_01400;Name=NM058_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01400 CP101611.1 Protein Homology CDS 262895 263392 . + 0 ID=cds-UTX05497.1;Parent=gene-NM058_01400;Dbxref=NCBI_GP:UTX05497.1;Name=UTX05497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391830.2;locus_tag=NM058_01400;product=GNAT family N-acetyltransferase;protein_id=UTX05497.1;transl_table=11 CP101611.1 Genbank gene 263417 264211 . + . ID=gene-NM058_01405;Name=NM058_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01405 CP101611.1 Protein Homology CDS 263417 264211 . + 0 ID=cds-UTX05498.1;Parent=gene-NM058_01405;Dbxref=NCBI_GP:UTX05498.1;Name=UTX05498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391829.1;locus_tag=NM058_01405;product=amino acid ABC transporter substrate-binding protein;protein_id=UTX05498.1;transl_table=11 CP101611.1 Genbank pseudogene 264234 264906 . + . ID=gene-NM058_01410;Name=NM058_01410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01410;pseudo=true CP101611.1 Protein Homology CDS 264234 264906 . + 0 ID=cds-NM058_01410;Parent=gene-NM058_01410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391828.1;locus_tag=NM058_01410;product=amino acid ABC transporter permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 264919 265668 . + . ID=gene-NM058_01415;Name=NM058_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01415 CP101611.1 Protein Homology CDS 264919 265668 . + 0 ID=cds-UTX05499.1;Parent=gene-NM058_01415;Dbxref=NCBI_GP:UTX05499.1;Name=UTX05499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391827.1;locus_tag=NM058_01415;product=amino acid ABC transporter ATP-binding protein;protein_id=UTX05499.1;transl_table=11 CP101611.1 Genbank gene 265685 266827 . + . ID=gene-NM058_01420;Name=sndB;gbkey=Gene;gene=sndB;gene_biotype=protein_coding;locus_tag=NM058_01420 CP101611.1 Protein Homology CDS 265685 266827 . + 0 ID=cds-UTX05500.1;Parent=gene-NM058_01420;Dbxref=NCBI_GP:UTX05500.1;Name=UTX05500.1;gbkey=CDS;gene=sndB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391826.2;locus_tag=NM058_01420;product=N-acetyl-sulfur-metabolite deacetylase SndB;protein_id=UTX05500.1;transl_table=11 CP101611.1 Genbank gene 266824 268161 . + . ID=gene-NM058_01425;Name=NM058_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01425 CP101611.1 Protein Homology CDS 266824 268161 . + 0 ID=cds-UTX05501.1;Parent=gene-NM058_01425;Dbxref=NCBI_GP:UTX05501.1;Name=UTX05501.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391825.2;locus_tag=NM058_01425;product=MmgE/PrpD family protein;protein_id=UTX05501.1;transl_table=11 CP101611.1 Genbank pseudogene 268231 269348 . + . ID=gene-NM058_01430;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=pseudogene;locus_tag=NM058_01430;pseudo=true CP101611.1 Protein Homology CDS 268231 269348 . + 0 ID=cds-NM058_01430;Parent=gene-NM058_01430;Note=frameshifted;gbkey=CDS;gene=eutH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236325.1;locus_tag=NM058_01430;product=ethanolamine utilization protein EutH;pseudo=true;transl_table=11 CP101611.1 Genbank gene 269413 270240 . + . ID=gene-NM058_01435;Name=NM058_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01435 CP101611.1 Protein Homology CDS 269413 270240 . + 0 ID=cds-UTX05502.1;Parent=gene-NM058_01435;Dbxref=NCBI_GP:UTX05502.1;Name=UTX05502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391823.2;locus_tag=NM058_01435;product=DUF1206 domain-containing protein;protein_id=UTX05502.1;transl_table=11 CP101611.1 Genbank gene 270376 271317 . + . ID=gene-NM058_01440;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=NM058_01440 CP101611.1 Protein Homology CDS 270376 271317 . + 0 ID=cds-UTX05503.1;Parent=gene-NM058_01440;Dbxref=NCBI_GP:UTX05503.1;Name=UTX05503.1;gbkey=CDS;gene=deoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391822.1;locus_tag=NM058_01440;product=DNA-binding transcriptional repressor DeoR;protein_id=UTX05503.1;transl_table=11 CP101611.1 Genbank gene 271423 272091 . + . ID=gene-NM058_01445;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=NM058_01445 CP101611.1 Protein Homology CDS 271423 272091 . + 0 ID=cds-UTX05504.1;Parent=gene-NM058_01445;Dbxref=NCBI_GP:UTX05504.1;Name=UTX05504.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391821.2;locus_tag=NM058_01445;product=deoxyribose-phosphate aldolase;protein_id=UTX05504.1;transl_table=11 CP101611.1 Genbank gene 272185 273366 . + . ID=gene-NM058_01450;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=NM058_01450 CP101611.1 Protein Homology CDS 272185 273366 . + 0 ID=cds-UTX05505.1;Parent=gene-NM058_01450;Dbxref=NCBI_GP:UTX05505.1;Name=UTX05505.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391820.2;locus_tag=NM058_01450;product=nucleoside permease NupC;protein_id=UTX05505.1;transl_table=11 CP101611.1 Genbank gene 273395 274696 . + . ID=gene-NM058_01455;Name=NM058_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01455 CP101611.1 Protein Homology CDS 273395 274696 . + 0 ID=cds-UTX05506.1;Parent=gene-NM058_01455;Dbxref=NCBI_GP:UTX05506.1;Name=UTX05506.1;Ontology_term=GO:0006213,GO:0016154;gbkey=CDS;go_function=pyrimidine-nucleoside phosphorylase activity|0016154||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391819.2;locus_tag=NM058_01455;product=pyrimidine-nucleoside phosphorylase;protein_id=UTX05506.1;transl_table=11 CP101611.1 Genbank gene 274740 276167 . - . ID=gene-NM058_01460;Name=NM058_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01460 CP101611.1 Protein Homology CDS 274740 276167 . - 0 ID=cds-UTX05507.1;Parent=gene-NM058_01460;Dbxref=NCBI_GP:UTX05507.1;Name=UTX05507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391818.2;locus_tag=NM058_01460;product=amino acid permease;protein_id=UTX05507.1;transl_table=11 CP101611.1 Genbank pseudogene 276247 277202 . - . ID=gene-NM058_01465;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=pseudogene;locus_tag=NM058_01465;pseudo=true CP101611.1 Protein Homology CDS 276247 277202 . - 0 ID=cds-NM058_01465;Parent=gene-NM058_01465;Note=frameshifted;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236314.1;locus_tag=NM058_01465;product=formimidoylglutamase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 277195 278458 . - . ID=gene-NM058_01470;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=pseudogene;locus_tag=NM058_01470;pseudo=true CP101611.1 Protein Homology CDS 277195 278458 . - 0 ID=cds-NM058_01470;Parent=gene-NM058_01470;Note=frameshifted;gbkey=CDS;gene=hutI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391816.1;locus_tag=NM058_01470;product=imidazolonepropionase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 278471 280129 . - . ID=gene-NM058_01475;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=NM058_01475 CP101611.1 Protein Homology CDS 278471 280129 . - 0 ID=cds-UTX05508.1;Parent=gene-NM058_01475;Dbxref=NCBI_GP:UTX05508.1;Name=UTX05508.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391815.1;locus_tag=NM058_01475;product=urocanate hydratase;protein_id=UTX05508.1;transl_table=11 CP101611.1 Genbank gene 280126 281652 . - . ID=gene-NM058_01480;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=NM058_01480 CP101611.1 Protein Homology CDS 280126 281652 . - 0 ID=cds-UTX05509.1;Parent=gene-NM058_01480;Dbxref=NCBI_GP:UTX05509.1;Name=UTX05509.1;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391814.1;locus_tag=NM058_01480;product=histidine ammonia-lyase;protein_id=UTX05509.1;transl_table=11 CP101611.1 Genbank gene 281765 282211 . - . ID=gene-NM058_01485;Name=hutP;gbkey=Gene;gene=hutP;gene_biotype=protein_coding;locus_tag=NM058_01485 CP101611.1 Protein Homology CDS 281765 282211 . - 0 ID=cds-UTX05510.1;Parent=gene-NM058_01485;Dbxref=NCBI_GP:UTX05510.1;Name=UTX05510.1;gbkey=CDS;gene=hutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391813.2;locus_tag=NM058_01485;product=hut operon transcriptional regulator HutP;protein_id=UTX05510.1;transl_table=11 CP101611.1 Genbank pseudogene 282455 283442 . + . ID=gene-NM058_01490;Name=NM058_01490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01490;pseudo=true CP101611.1 Protein Homology CDS 282455 283442 . + 0 ID=cds-NM058_01490;Parent=gene-NM058_01490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003218950.1;locus_tag=NM058_01490;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 283516 284934 . + . ID=gene-NM058_01495;Name=abnB;gbkey=Gene;gene=abnB;gene_biotype=protein_coding;locus_tag=NM058_01495 CP101611.1 Protein Homology CDS 283516 284934 . + 0 ID=cds-UTX05511.1;Parent=gene-NM058_01495;Dbxref=NCBI_GP:UTX05511.1;Name=UTX05511.1;gbkey=CDS;gene=abnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003326247.1;locus_tag=NM058_01495;product=arabinan endo-1%2C5-alpha-L-arabinosidase AbnB;protein_id=UTX05511.1;transl_table=11 CP101611.1 Genbank gene 285141 285398 . + . ID=gene-NM058_01500;Name=NM058_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01500 CP101611.1 Protein Homology CDS 285141 285398 . + 0 ID=cds-UTX05512.1;Parent=gene-NM058_01500;Dbxref=NCBI_GP:UTX05512.1;Name=UTX05512.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021106.2;locus_tag=NM058_01500;product=NgoFVII family restriction endonuclease;protein_id=UTX05512.1;transl_table=11 CP101611.1 Genbank gene 285446 286015 . + . ID=gene-NM058_01505;Name=NM058_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01505 CP101611.1 Protein Homology CDS 285446 286015 . + 0 ID=cds-UTX05513.1;Parent=gene-NM058_01505;Dbxref=NCBI_GP:UTX05513.1;Name=UTX05513.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021106.2;locus_tag=NM058_01505;product=NgoFVII family restriction endonuclease;protein_id=UTX05513.1;transl_table=11 CP101611.1 Genbank gene 286027 288027 . + . ID=gene-NM058_01510;Name=NM058_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01510 CP101611.1 Protein Homology CDS 286027 288027 . + 0 ID=cds-UTX05514.1;Parent=gene-NM058_01510;Dbxref=NCBI_GP:UTX05514.1;Name=UTX05514.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF022063.2;locus_tag=NM058_01510;product=DEAD/DEAH box helicase family protein;protein_id=UTX05514.1;transl_table=11 CP101611.1 Genbank gene 288112 289218 . - . ID=gene-NM058_01515;Name=NM058_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01515 CP101611.1 Protein Homology CDS 288112 289218 . - 0 ID=cds-UTX05515.1;Parent=gene-NM058_01515;Dbxref=NCBI_GP:UTX05515.1;Name=UTX05515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145713.1;locus_tag=NM058_01515;product=DNA cytosine methyltransferase;protein_id=UTX05515.1;transl_table=11 CP101611.1 Genbank gene 289371 289799 . + . ID=gene-NM058_01520;Name=NM058_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01520 CP101611.1 Protein Homology CDS 289371 289799 . + 0 ID=cds-UTX05516.1;Parent=gene-NM058_01520;Dbxref=NCBI_GP:UTX05516.1;Name=UTX05516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013354125.1;locus_tag=NM058_01520;product=very short patch repair endonuclease;protein_id=UTX05516.1;transl_table=11 CP101611.1 Genbank gene 290174 290539 . + . ID=gene-NM058_01525;Name=NM058_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01525 CP101611.1 Protein Homology CDS 290174 290539 . + 0 ID=cds-UTX05517.1;Parent=gene-NM058_01525;Dbxref=NCBI_GP:UTX05517.1;Name=UTX05517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391811.1;locus_tag=NM058_01525;product=DUF5082 domain-containing protein;protein_id=UTX05517.1;transl_table=11 CP101611.1 Genbank gene 290551 290820 . + . ID=gene-NM058_01530;Name=NM058_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01530 CP101611.1 Protein Homology CDS 290551 290820 . + 0 ID=cds-UTX05518.1;Parent=gene-NM058_01530;Dbxref=NCBI_GP:UTX05518.1;Name=UTX05518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391810.1;locus_tag=NM058_01530;product=YwqI/YxiC family protein;protein_id=UTX05518.1;transl_table=11 CP101611.1 Genbank gene 290840 292456 . + . ID=gene-NM058_01535;Name=NM058_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01535 CP101611.1 Protein Homology CDS 290840 292456 . + 0 ID=cds-UTX05519.1;Parent=gene-NM058_01535;Dbxref=NCBI_GP:UTX05519.1;Name=UTX05519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014115732.1;locus_tag=NM058_01535;product=T7SS effector LXG polymorphic toxin;protein_id=UTX05519.1;transl_table=11 CP101611.1 Genbank gene 292473 292799 . + . ID=gene-NM058_01540;Name=NM058_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01540 CP101611.1 Protein Homology CDS 292473 292799 . + 0 ID=cds-UTX05520.1;Parent=gene-NM058_01540;Dbxref=NCBI_GP:UTX05520.1;Name=UTX05520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014481380.1;locus_tag=NM058_01540;product=immunity 8 family protein;protein_id=UTX05520.1;transl_table=11 CP101611.1 Genbank pseudogene 293104 294177 . + . ID=gene-NM058_01545;Name=NM058_01545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01545;pseudo=true CP101611.1 Protein Homology CDS 293104 294177 . + 0 ID=cds-NM058_01545;Parent=gene-NM058_01545;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014115732.1;locus_tag=NM058_01545;product=T7SS effector LXG polymorphic toxin;pseudo=true;transl_table=11 CP101611.1 Genbank gene 294610 294861 . + . ID=gene-NM058_01550;Name=NM058_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01550 CP101611.1 Protein Homology CDS 294610 294861 . + 0 ID=cds-UTX05521.1;Parent=gene-NM058_01550;Dbxref=NCBI_GP:UTX05521.1;Name=UTX05521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014665975.1;locus_tag=NM058_01550;product=hypothetical protein;protein_id=UTX05521.1;transl_table=11 CP101611.1 Genbank gene 294963 295343 . + . ID=gene-NM058_01555;Name=NM058_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01555 CP101611.1 Protein Homology CDS 294963 295343 . + 0 ID=cds-UTX05522.1;Parent=gene-NM058_01555;Dbxref=NCBI_GP:UTX05522.1;Name=UTX05522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006640237.1;locus_tag=NM058_01555;product=hypothetical protein;protein_id=UTX05522.1;transl_table=11 CP101611.1 Genbank gene 295360 295863 . + . ID=gene-NM058_01560;Name=NM058_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01560 CP101611.1 Protein Homology CDS 295360 295863 . + 0 ID=cds-UTX05523.1;Parent=gene-NM058_01560;Dbxref=NCBI_GP:UTX05523.1;Name=UTX05523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015483912.1;locus_tag=NM058_01560;product=hypothetical protein;protein_id=UTX05523.1;transl_table=11 CP101611.1 Genbank gene 296303 296818 . + . ID=gene-NM058_01565;Name=NM058_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01565 CP101611.1 Protein Homology CDS 296303 296818 . + 0 ID=cds-UTX05524.1;Parent=gene-NM058_01565;Dbxref=NCBI_GP:UTX05524.1;Name=UTX05524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017368411.1;locus_tag=NM058_01565;product=DUF2247 family protein;protein_id=UTX05524.1;transl_table=11 CP101611.1 Genbank pseudogene 297117 298942 . + . ID=gene-NM058_01570;Name=bglP;gbkey=Gene;gene=bglP;gene_biotype=pseudogene;locus_tag=NM058_01570;pseudo=true CP101611.1 Protein Homology CDS 297117 298942 . + 0 ID=cds-NM058_01570;Parent=gene-NM058_01570;Note=frameshifted%3B internal stop;gbkey=CDS;gene=bglP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391806.2;locus_tag=NM058_01570;product=PTS beta-glucoside transporter subunit IIABC;pseudo=true;transl_table=11 CP101611.1 Genbank gene 298965 300374 . + . ID=gene-NM058_01575;Name=bglH;gbkey=Gene;gene=bglH;gene_biotype=protein_coding;locus_tag=NM058_01575 CP101611.1 Protein Homology CDS 298965 300374 . + 0 ID=cds-UTX05525.1;Parent=gene-NM058_01575;Dbxref=NCBI_GP:UTX05525.1;Name=UTX05525.1;gbkey=CDS;gene=bglH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391805.2;locus_tag=NM058_01575;product=aryl-phospho-beta-d-glucosidase;protein_id=UTX05525.1;transl_table=11 CP101611.1 Genbank gene 300477 300923 . + . ID=gene-NM058_01580;Name=NM058_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01580 CP101611.1 Protein Homology CDS 300477 300923 . + 0 ID=cds-UTX05526.1;Parent=gene-NM058_01580;Dbxref=NCBI_GP:UTX05526.1;Name=UTX05526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391804.1;locus_tag=NM058_01580;product=universal stress protein;protein_id=UTX05526.1;transl_table=11 CP101611.1 Genbank gene 301200 301964 . - . ID=gene-NM058_01585;Name=NM058_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01585 CP101611.1 Protein Homology CDS 301200 301964 . - 0 ID=cds-UTX05527.1;Parent=gene-NM058_01585;Dbxref=NCBI_GP:UTX05527.1;Name=UTX05527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259909.1;locus_tag=NM058_01585;product=hypothetical protein;protein_id=UTX05527.1;transl_table=11 CP101611.1 Genbank gene 302626 303087 . + . ID=gene-NM058_01590;Name=NM058_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01590 CP101611.1 Protein Homology CDS 302626 303087 . + 0 ID=cds-UTX05528.1;Parent=gene-NM058_01590;Dbxref=NCBI_GP:UTX05528.1;Name=UTX05528.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=NM058_01590;product=SDR family oxidoreductase;protein_id=UTX05528.1;transl_table=11 CP101611.1 Genbank gene 303155 304090 . + . ID=gene-NM058_01595;Name=NM058_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01595 CP101611.1 Protein Homology CDS 303155 304090 . + 0 ID=cds-UTX06936.1;Parent=gene-NM058_01595;Dbxref=NCBI_GP:UTX06936.1;Name=UTX06936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391803.1;locus_tag=NM058_01595;product=DMT family transporter;protein_id=UTX06936.1;transl_table=11 CP101611.1 Genbank gene 304336 304785 . + . ID=gene-NM058_01600;Name=NM058_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01600 CP101611.1 Protein Homology CDS 304336 304785 . + 0 ID=cds-UTX05529.1;Parent=gene-NM058_01600;Dbxref=NCBI_GP:UTX05529.1;Name=UTX05529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014665961.1;locus_tag=NM058_01600;product=hypothetical protein;protein_id=UTX05529.1;transl_table=11 CP101611.1 Genbank gene 304965 305435 . + . ID=gene-NM058_01605;Name=NM058_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01605 CP101611.1 Protein Homology CDS 304965 305435 . + 0 ID=cds-UTX05530.1;Parent=gene-NM058_01605;Dbxref=NCBI_GP:UTX05530.1;Name=UTX05530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391800.1;locus_tag=NM058_01605;product=hypothetical protein;protein_id=UTX05530.1;transl_table=11 CP101611.1 Genbank pseudogene 305429 305810 . + . ID=gene-NM058_01610;Name=NM058_01610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01610;pseudo=true CP101611.1 Protein Homology CDS 305429 305810 . + 0 ID=cds-NM058_01610;Parent=gene-NM058_01610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391799.1;locus_tag=NM058_01610;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 305861 306277 . + . ID=gene-NM058_01615;Name=NM058_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01615 CP101611.1 Protein Homology CDS 305861 306277 . + 0 ID=cds-UTX05531.1;Parent=gene-NM058_01615;Dbxref=NCBI_GP:UTX05531.1;Name=UTX05531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391798.1;locus_tag=NM058_01615;product=hypothetical protein;protein_id=UTX05531.1;transl_table=11 CP101611.1 Genbank pseudogene 306506 306832 . + . ID=gene-NM058_01620;Name=NM058_01620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01620;pseudo=true CP101611.1 Protein Homology CDS 306506 306832 . + 0 ID=cds-NM058_01620;Parent=gene-NM058_01620;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391797.1;locus_tag=NM058_01620;product=DNA-binding protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 306905 307357 . + . ID=gene-NM058_01625;Name=NM058_01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01625 CP101611.1 Protein Homology CDS 306905 307357 . + 0 ID=cds-UTX06937.1;Parent=gene-NM058_01625;Dbxref=NCBI_GP:UTX06937.1;Name=UTX06937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391796.1;locus_tag=NM058_01625;product=hypothetical protein;protein_id=UTX06937.1;transl_table=11 CP101611.1 Genbank gene 307375 307878 . + . ID=gene-NM058_01630;Name=NM058_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01630 CP101611.1 Protein Homology CDS 307375 307878 . + 0 ID=cds-UTX06938.1;Parent=gene-NM058_01630;Dbxref=NCBI_GP:UTX06938.1;Name=UTX06938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236263.1;locus_tag=NM058_01630;product=DUF2716 domain-containing protein;protein_id=UTX06938.1;transl_table=11 CP101611.1 Genbank gene 307882 308640 . + . ID=gene-NM058_01635;Name=NM058_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01635 CP101611.1 Protein Homology CDS 307882 308640 . + 0 ID=cds-UTX05532.1;Parent=gene-NM058_01635;Dbxref=NCBI_GP:UTX05532.1;Name=UTX05532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003218893.1;locus_tag=NM058_01635;product=hypothetical protein;protein_id=UTX05532.1;transl_table=11 CP101611.1 Genbank gene 308671 309123 . + . ID=gene-NM058_01640;Name=NM058_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01640 CP101611.1 GeneMarkS-2+ CDS 308671 309123 . + 0 ID=cds-UTX05533.1;Parent=gene-NM058_01640;Dbxref=NCBI_GP:UTX05533.1;Name=UTX05533.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_01640;product=hypothetical protein;protein_id=UTX05533.1;transl_table=11 CP101611.1 Genbank gene 309180 309479 . + . ID=gene-NM058_01645;Name=NM058_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01645 CP101611.1 GeneMarkS-2+ CDS 309180 309479 . + 0 ID=cds-UTX05534.1;Parent=gene-NM058_01645;Dbxref=NCBI_GP:UTX05534.1;Name=UTX05534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_01645;product=hypothetical protein;protein_id=UTX05534.1;transl_table=11 CP101611.1 Genbank gene 309503 309799 . + . ID=gene-NM058_01650;Name=NM058_01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01650 CP101611.1 Protein Homology CDS 309503 309799 . + 0 ID=cds-UTX05535.1;Parent=gene-NM058_01650;Dbxref=NCBI_GP:UTX05535.1;Name=UTX05535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391794.1;locus_tag=NM058_01650;product=YxiJ-like family protein;protein_id=UTX05535.1;transl_table=11 CP101611.1 Genbank gene 309813 310265 . + . ID=gene-NM058_01655;Name=NM058_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01655 CP101611.1 Protein Homology CDS 309813 310265 . + 0 ID=cds-UTX05536.1;Parent=gene-NM058_01655;Dbxref=NCBI_GP:UTX05536.1;Name=UTX05536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015250883.1;locus_tag=NM058_01655;product=hypothetical protein;protein_id=UTX05536.1;transl_table=11 CP101611.1 Genbank pseudogene 310287 310403 . + . ID=gene-NM058_01660;Name=NM058_01660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01660;pseudo=true CP101611.1 Protein Homology CDS 310287 310403 . + 0 ID=cds-NM058_01660;Parent=gene-NM058_01660;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097796.1;locus_tag=NM058_01660;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 310722 310994 . + . ID=gene-NM058_01665;Name=NM058_01665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01665;pseudo=true CP101611.1 Protein Homology CDS 310722 310994 . + 0 ID=cds-NM058_01665;Parent=gene-NM058_01665;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391803.1;locus_tag=NM058_01665;product=DMT family transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 311216 311653 . + . ID=gene-NM058_01670;Name=NM058_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01670 CP101611.1 Protein Homology CDS 311216 311653 . + 0 ID=cds-UTX05537.1;Parent=gene-NM058_01670;Dbxref=NCBI_GP:UTX05537.1;Name=UTX05537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003218879.1;locus_tag=NM058_01670;product=hypothetical protein;protein_id=UTX05537.1;transl_table=11 CP101611.1 Genbank gene 311672 312229 . - . ID=gene-NM058_01675;Name=NM058_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01675 CP101611.1 Protein Homology CDS 311672 312229 . - 0 ID=cds-UTX05538.1;Parent=gene-NM058_01675;Dbxref=NCBI_GP:UTX05538.1;Name=UTX05538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003218877.1;locus_tag=NM058_01675;product=DUF2812 domain-containing protein;protein_id=UTX05538.1;transl_table=11 CP101611.1 Genbank gene 312226 312567 . - . ID=gene-NM058_01680;Name=NM058_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01680 CP101611.1 Protein Homology CDS 312226 312567 . - 0 ID=cds-UTX05539.1;Parent=gene-NM058_01680;Dbxref=NCBI_GP:UTX05539.1;Name=UTX05539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010332451.1;locus_tag=NM058_01680;product=PadR family transcriptional regulator;protein_id=UTX05539.1;transl_table=11 CP101611.1 Genbank gene 312732 313880 . + . ID=gene-NM058_01685;Name=NM058_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01685 CP101611.1 Protein Homology CDS 312732 313880 . + 0 ID=cds-UTX05540.1;Parent=gene-NM058_01685;Dbxref=NCBI_GP:UTX05540.1;Name=UTX05540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391791.2;locus_tag=NM058_01685;product=GDSL-type esterase/lipase family protein;protein_id=UTX05540.1;transl_table=11 CP101611.1 Genbank gene 313962 315401 . + . ID=gene-NM058_01690;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=NM058_01690 CP101611.1 Protein Homology CDS 313962 315401 . + 0 ID=cds-UTX05541.1;Parent=gene-NM058_01690;Dbxref=NCBI_GP:UTX05541.1;Name=UTX05541.1;gbkey=CDS;gene=dbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391790.2;locus_tag=NM058_01690;product=ATP-dependent RNA helicase DbpA;protein_id=UTX05541.1;transl_table=11 CP101611.1 Genbank gene 315420 316706 . - . ID=gene-NM058_01695;Name=NM058_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01695 CP101611.1 Protein Homology CDS 315420 316706 . - 0 ID=cds-UTX05542.1;Parent=gene-NM058_01695;Dbxref=NCBI_GP:UTX05542.1;Name=UTX05542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391789.1;locus_tag=NM058_01695;product=MFS transporter;protein_id=UTX05542.1;transl_table=11 CP101611.1 Genbank gene 316912 317592 . + . ID=gene-NM058_01700;Name=NM058_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01700 CP101611.1 Protein Homology CDS 316912 317592 . + 0 ID=cds-UTX05543.1;Parent=gene-NM058_01700;Dbxref=NCBI_GP:UTX05543.1;Name=UTX05543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391788.1;locus_tag=NM058_01700;product=hypothetical protein;protein_id=UTX05543.1;transl_table=11 CP101611.1 Genbank gene 317686 318519 . + . ID=gene-NM058_01705;Name=licT;gbkey=Gene;gene=licT;gene_biotype=protein_coding;locus_tag=NM058_01705 CP101611.1 Protein Homology CDS 317686 318519 . + 0 ID=cds-UTX05544.1;Parent=gene-NM058_01705;Dbxref=NCBI_GP:UTX05544.1;Name=UTX05544.1;gbkey=CDS;gene=licT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236231.1;locus_tag=NM058_01705;product=transcriptional antiterminator LicT;protein_id=UTX05544.1;transl_table=11 CP101611.1 Genbank gene 318835 320667 . + . ID=gene-NM058_01710;Name=NM058_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01710 CP101611.1 Protein Homology CDS 318835 320667 . + 0 ID=cds-UTX05545.1;Parent=gene-NM058_01710;Dbxref=NCBI_GP:UTX05545.1;Name=UTX05545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259894.1;locus_tag=NM058_01710;product=PTS beta-glucoside transporter subunit IIBCA;protein_id=UTX05545.1;transl_table=11 CP101611.1 Genbank gene 320688 322109 . + . ID=gene-NM058_01715;Name=NM058_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01715 CP101611.1 Protein Homology CDS 320688 322109 . + 0 ID=cds-UTX05546.1;Parent=gene-NM058_01715;Dbxref=NCBI_GP:UTX05546.1;Name=UTX05546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236227.1;locus_tag=NM058_01715;product=glycoside hydrolase family 1 protein;protein_id=UTX05546.1;transl_table=11 CP101611.1 Genbank gene 322586 323317 . + . ID=gene-NM058_01720;Name=bglS;gbkey=Gene;gene=bglS;gene_biotype=protein_coding;locus_tag=NM058_01720 CP101611.1 Protein Homology CDS 322586 323317 . + 0 ID=cds-UTX05547.1;Parent=gene-NM058_01720;Dbxref=NCBI_GP:UTX05547.1;Name=UTX05547.1;gbkey=CDS;gene=bglS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391786.1;locus_tag=NM058_01720;product=beta-glucanase;protein_id=UTX05547.1;transl_table=11 CP101611.1 Genbank gene 323498 324778 . - . ID=gene-NM058_01725;Name=citH;gbkey=Gene;gene=citH;gene_biotype=protein_coding;locus_tag=NM058_01725 CP101611.1 Protein Homology CDS 323498 324778 . - 0 ID=cds-UTX05548.1;Parent=gene-NM058_01725;Dbxref=NCBI_GP:UTX05548.1;Name=UTX05548.1;gbkey=CDS;gene=citH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391785.2;locus_tag=NM058_01725;product=citrate transporter CitH;protein_id=UTX05548.1;transl_table=11 CP101611.1 Genbank gene 324981 327041 . + . ID=gene-NM058_01730;Name=NM058_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01730 CP101611.1 Protein Homology CDS 324981 327041 . + 0 ID=cds-UTX05549.1;Parent=gene-NM058_01730;Dbxref=NCBI_GP:UTX05549.1;Name=UTX05549.1;Ontology_term=GO:0004096,GO:0020037;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391784.2;locus_tag=NM058_01730;product=catalase;protein_id=UTX05549.1;transl_table=11 CP101611.1 Genbank gene 327091 327381 . + . ID=gene-NM058_01735;Name=NM058_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01735 CP101611.1 Protein Homology CDS 327091 327381 . + 0 ID=cds-UTX05550.1;Parent=gene-NM058_01735;Dbxref=NCBI_GP:UTX05550.1;Name=UTX05550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391783.2;locus_tag=NM058_01735;product=hypothetical protein;protein_id=UTX05550.1;transl_table=11 CP101611.1 Genbank gene 327527 328198 . + . ID=gene-NM058_01740;Name=NM058_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01740 CP101611.1 Protein Homology CDS 327527 328198 . + 0 ID=cds-UTX05551.1;Parent=gene-NM058_01740;Dbxref=NCBI_GP:UTX05551.1;Name=UTX05551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019716228.1;locus_tag=NM058_01740;product=DUF3298 and DUF4163 domain-containing protein;protein_id=UTX05551.1;transl_table=11 CP101611.1 Genbank gene 328240 329433 . - . ID=gene-NM058_01745;Name=NM058_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01745 CP101611.1 Protein Homology CDS 328240 329433 . - 0 ID=cds-UTX05552.1;Parent=gene-NM058_01745;Dbxref=NCBI_GP:UTX05552.1;Name=UTX05552.1;Ontology_term=GO:0015858,GO:0005337,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391781.2;locus_tag=NM058_01745;product=NupC/NupG family nucleoside CNT transporter;protein_id=UTX05552.1;transl_table=11 CP101611.1 cmsearch riboswitch 329561 329662 . - . ID=id-CP101611.1:329561..329662;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 330043 330903 . + . ID=gene-NM058_01750;Name=NM058_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01750 CP101611.1 Protein Homology CDS 330043 330903 . + 0 ID=cds-UTX05553.1;Parent=gene-NM058_01750;Dbxref=NCBI_GP:UTX05553.1;Name=UTX05553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391780.1;locus_tag=NM058_01750;product=methyltransferase domain-containing protein;protein_id=UTX05553.1;transl_table=11 CP101611.1 Genbank gene 331054 332472 . + . ID=gene-NM058_01755;Name=NM058_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01755 CP101611.1 Protein Homology CDS 331054 332472 . + 0 ID=cds-UTX05554.1;Parent=gene-NM058_01755;Dbxref=NCBI_GP:UTX05554.1;Name=UTX05554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391779.3;locus_tag=NM058_01755;product=GntP family permease;protein_id=UTX05554.1;transl_table=11 CP101611.1 Genbank gene 332496 333212 . + . ID=gene-NM058_01760;Name=NM058_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01760 CP101611.1 Protein Homology CDS 332496 333212 . + 0 ID=cds-UTX05555.1;Parent=gene-NM058_01760;Dbxref=NCBI_GP:UTX05555.1;Name=UTX05555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391778.1;locus_tag=NM058_01760;product=CoA transferase subunit A;protein_id=UTX05555.1;transl_table=11 CP101611.1 Genbank gene 333209 333865 . + . ID=gene-NM058_01765;Name=NM058_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01765 CP101611.1 Protein Homology CDS 333209 333865 . + 0 ID=cds-UTX05556.1;Parent=gene-NM058_01765;Dbxref=NCBI_GP:UTX05556.1;Name=UTX05556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236201.1;locus_tag=NM058_01765;product=CoA transferase subunit B;protein_id=UTX05556.1;transl_table=11 CP101611.1 Genbank pseudogene 333882 334654 . + . ID=gene-NM058_01770;Name=NM058_01770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01770;pseudo=true CP101611.1 Protein Homology CDS 333882 334654 . + 0 ID=cds-NM058_01770;Parent=gene-NM058_01770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391776.2;locus_tag=NM058_01770;product=3-hydroxybutyrate dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 334704 335840 . - . ID=gene-NM058_01775;Name=NM058_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01775 CP101611.1 Protein Homology CDS 334704 335840 . - 0 ID=cds-UTX05557.1;Parent=gene-NM058_01775;Dbxref=NCBI_GP:UTX05557.1;Name=UTX05557.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391775.3;locus_tag=NM058_01775;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=UTX05557.1;transl_table=11 CP101611.1 cmsearch riboswitch 335918 336024 . - . ID=id-CP101611.1:335918..336024;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank pseudogene 336093 337230 . - . ID=gene-NM058_01780;Name=NM058_01780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01780;pseudo=true CP101611.1 Protein Homology CDS 336093 337230 . - 0 ID=cds-NM058_01780;Parent=gene-NM058_01780;Note=frameshifted;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391774.2;locus_tag=NM058_01780;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;pseudo=true;transl_table=11 CP101611.1 cmsearch riboswitch 337314 337420 . - . ID=id-CP101611.1:337314..337420;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 337486 337974 . - . ID=gene-NM058_01785;Name=NM058_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01785 CP101611.1 Protein Homology CDS 337486 337974 . - 0 ID=cds-UTX05558.1;Parent=gene-NM058_01785;Dbxref=NCBI_GP:UTX05558.1;Name=UTX05558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391773.1;locus_tag=NM058_01785;product=LURP-one-related/scramblase family protein;protein_id=UTX05558.1;transl_table=11 CP101611.1 Genbank gene 338148 338426 . - . ID=gene-NM058_01790;Name=NM058_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01790 CP101611.1 Protein Homology CDS 338148 338426 . - 0 ID=cds-UTX05559.1;Parent=gene-NM058_01790;Dbxref=NCBI_GP:UTX05559.1;Name=UTX05559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391772.1;locus_tag=NM058_01790;product=hypothetical protein;protein_id=UTX05559.1;transl_table=11 CP101611.1 Genbank gene 338938 340170 . - . ID=gene-NM058_01795;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=NM058_01795 CP101611.1 Protein Homology CDS 338938 340170 . - 0 ID=cds-UTX05560.1;Parent=gene-NM058_01795;Dbxref=NCBI_GP:UTX05560.1;Name=UTX05560.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391771.1;locus_tag=NM058_01795;product=peptidase T;protein_id=UTX05560.1;transl_table=11 CP101611.1 Genbank gene 340220 340876 . - . ID=gene-NM058_01800;Name=yxjL;gbkey=Gene;gene=yxjL;gene_biotype=protein_coding;locus_tag=NM058_01800 CP101611.1 Protein Homology CDS 340220 340876 . - 0 ID=cds-UTX05561.1;Parent=gene-NM058_01800;Dbxref=NCBI_GP:UTX05561.1;Name=UTX05561.1;gbkey=CDS;gene=yxjL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391770.1;locus_tag=NM058_01800;product=two-component system response regulator YxJL;protein_id=UTX05561.1;transl_table=11 CP101611.1 Genbank gene 340863 342083 . - . ID=gene-NM058_01805;Name=NM058_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01805 CP101611.1 Protein Homology CDS 340863 342083 . - 0 ID=cds-UTX05562.1;Parent=gene-NM058_01805;Dbxref=NCBI_GP:UTX05562.1;Name=UTX05562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391769.1;locus_tag=NM058_01805;product=sensor histidine kinase;protein_id=UTX05562.1;transl_table=11 CP101611.1 Genbank gene 342101 342574 . - . ID=gene-NM058_01810;Name=NM058_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01810 CP101611.1 Protein Homology CDS 342101 342574 . - 0 ID=cds-UTX05563.1;Parent=gene-NM058_01810;Dbxref=NCBI_GP:UTX05563.1;Name=UTX05563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391768.1;locus_tag=NM058_01810;product=DUF1453 family protein;protein_id=UTX05563.1;transl_table=11 CP101611.1 Genbank gene 342839 343858 . + . ID=gene-NM058_01815;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=NM058_01815 CP101611.1 Protein Homology CDS 342839 343858 . + 0 ID=cds-UTX05564.1;Parent=gene-NM058_01815;Dbxref=NCBI_GP:UTX05564.1;Name=UTX05564.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391765.1;locus_tag=NM058_01815;product=UDP-glucose 4-epimerase GalE;protein_id=UTX05564.1;transl_table=11 CP101611.1 Genbank gene 343932 344471 . - . ID=gene-NM058_01820;Name=NM058_01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01820 CP101611.1 Protein Homology CDS 343932 344471 . - 0 ID=cds-UTX06939.1;Parent=gene-NM058_01820;Dbxref=NCBI_GP:UTX06939.1;Name=UTX06939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391764.2;locus_tag=NM058_01820;product=DUF4352 domain-containing protein;protein_id=UTX06939.1;transl_table=11 CP101611.1 cmsearch riboswitch 344861 344963 . + . ID=id-CP101611.1:344861..344963;Dbxref=RFAM:RF00442;Note=guanidine-I (ykkC/yxkD leader) riboswitch%3B Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria%3B This is class of guanidine riboswitches is based on the ykkC/yxkD leader.;bound_moiety=guanidine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 345033 345869 . + . ID=gene-NM058_01825;Name=NM058_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01825 CP101611.1 Protein Homology CDS 345033 345869 . + 0 ID=cds-UTX05565.1;Parent=gene-NM058_01825;Dbxref=NCBI_GP:UTX05565.1;Name=UTX05565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391763.1;locus_tag=NM058_01825;product=YitT family protein;protein_id=UTX05565.1;transl_table=11 CP101611.1 Genbank gene 345910 347367 . - . ID=gene-NM058_01830;Name=NM058_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01830 CP101611.1 Protein Homology CDS 345910 347367 . - 0 ID=cds-UTX05566.1;Parent=gene-NM058_01830;Dbxref=NCBI_GP:UTX05566.1;Name=UTX05566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391762.1;locus_tag=NM058_01830;product=aldehyde dehydrogenase family protein;protein_id=UTX05566.1;transl_table=11 CP101611.1 Genbank pseudogene 347552 348444 . + . ID=gene-NM058_01835;Name=NM058_01835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01835;pseudo=true CP101611.1 Protein Homology CDS 347552 348444 . + 0 ID=cds-NM058_01835;Parent=gene-NM058_01835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391761.1;locus_tag=NM058_01835;product=PucR family transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 348565 349661 . + . ID=gene-NM058_01840;Name=msmX;gbkey=Gene;gene=msmX;gene_biotype=pseudogene;locus_tag=NM058_01840;pseudo=true CP101611.1 Protein Homology CDS 348565 349661 . + 0 ID=cds-NM058_01840;Parent=gene-NM058_01840;Note=frameshifted;gbkey=CDS;gene=msmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391760.1;locus_tag=NM058_01840;product=maltodextrin ABC transporter ATP-binding protein MsmX;pseudo=true;transl_table=11 CP101611.1 Genbank gene 349767 350492 . + . ID=gene-NM058_01845;Name=NM058_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01845 CP101611.1 Protein Homology CDS 349767 350492 . + 0 ID=cds-UTX05567.1;Parent=gene-NM058_01845;Dbxref=NCBI_GP:UTX05567.1;Name=UTX05567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014115681.1;locus_tag=NM058_01845;product=ZIP family metal transporter;protein_id=UTX05567.1;transl_table=11 CP101611.1 Genbank gene 350594 351433 . + . ID=gene-NM058_01850;Name=NM058_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01850 CP101611.1 Protein Homology CDS 350594 351433 . + 0 ID=cds-UTX05568.1;Parent=gene-NM058_01850;Dbxref=NCBI_GP:UTX05568.1;Name=UTX05568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391759.1;locus_tag=NM058_01850;product=polysaccharide deacetylase family protein;protein_id=UTX05568.1;transl_table=11 CP101611.1 Genbank gene 351446 351640 . - . ID=gene-NM058_01855;Name=NM058_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01855 CP101611.1 Protein Homology CDS 351446 351640 . - 0 ID=cds-UTX05569.1;Parent=gene-NM058_01855;Dbxref=NCBI_GP:UTX05569.1;Name=UTX05569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391758.1;locus_tag=NM058_01855;product=hypothetical protein;protein_id=UTX05569.1;transl_table=11 CP101611.1 Genbank gene 351822 353174 . - . ID=gene-NM058_01860;Name=cimH;gbkey=Gene;gene=cimH;gene_biotype=protein_coding;locus_tag=NM058_01860 CP101611.1 Protein Homology CDS 351822 353174 . - 0 ID=cds-UTX05570.1;Parent=gene-NM058_01860;Dbxref=NCBI_GP:UTX05570.1;Name=UTX05570.1;gbkey=CDS;gene=cimH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391756.1;locus_tag=NM058_01860;product=citrate/malate transporter CimH;protein_id=UTX05570.1;transl_table=11 CP101611.1 Genbank gene 353730 355136 . + . ID=gene-NM058_01865;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=NM058_01865 CP101611.1 Protein Homology CDS 353730 355136 . + 0 ID=cds-UTX05571.1;Parent=gene-NM058_01865;Dbxref=NCBI_GP:UTX05571.1;Name=UTX05571.1;gbkey=CDS;gene=cydA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391755.1;locus_tag=NM058_01865;product=cytochrome ubiquinol oxidase subunit I;protein_id=UTX05571.1;transl_table=11 CP101611.1 Genbank gene 355120 356136 . + . ID=gene-NM058_01870;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=NM058_01870 CP101611.1 Protein Homology CDS 355120 356136 . + 0 ID=cds-UTX05572.1;Parent=gene-NM058_01870;Dbxref=NCBI_GP:UTX05572.1;Name=UTX05572.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391754.1;locus_tag=NM058_01870;product=cytochrome d ubiquinol oxidase subunit II;protein_id=UTX05572.1;transl_table=11 CP101611.1 Genbank gene 356136 357839 . + . ID=gene-NM058_01875;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=NM058_01875 CP101611.1 Protein Homology CDS 356136 357839 . + 0 ID=cds-UTX05573.1;Parent=gene-NM058_01875;Dbxref=NCBI_GP:UTX05573.1;Name=UTX05573.1;Ontology_term=GO:0033228,GO:0005524,GO:0033230,GO:0005887,GO:0055051;gbkey=CDS;gene=cydD;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA;go_process=cysteine export across plasma membrane|0033228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391753.1;locus_tag=NM058_01875;product=thiol reductant ABC exporter subunit CydD;protein_id=UTX05573.1;transl_table=11 CP101611.1 Genbank gene 357751 359562 . + . ID=gene-NM058_01880;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=NM058_01880 CP101611.1 Protein Homology CDS 357751 359562 . + 0 ID=cds-UTX05574.1;Parent=gene-NM058_01880;Dbxref=NCBI_GP:UTX05574.1;Name=UTX05574.1;Ontology_term=GO:0033228,GO:0005524,GO:0033230,GO:0005887,GO:0055051;gbkey=CDS;gene=cydC;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA;go_process=cysteine export across plasma membrane|0033228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391752.1;locus_tag=NM058_01880;product=thiol reductant ABC exporter subunit CydC;protein_id=UTX05574.1;transl_table=11 CP101611.1 Genbank pseudogene 359649 360478 . + . ID=gene-NM058_01885;Name=NM058_01885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_01885;pseudo=true CP101611.1 Protein Homology CDS 359649 360478 . + 0 ID=cds-NM058_01885;Parent=gene-NM058_01885;Note=frameshifted;Ontology_term=GO:0052855;gbkey=CDS;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391751.1;locus_tag=NM058_01885;product=NAD(P)H-hydrate dehydratase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 360492 361865 . - . ID=gene-NM058_01890;Name=NM058_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01890 CP101611.1 Protein Homology CDS 360492 361865 . - 0 ID=cds-UTX05575.1;Parent=gene-NM058_01890;Dbxref=NCBI_GP:UTX05575.1;Name=UTX05575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391750.1;locus_tag=NM058_01890;product=cytosine permease;protein_id=UTX05575.1;transl_table=11 CP101611.1 Genbank gene 362077 362613 . + . ID=gene-NM058_01895;Name=sigY;gbkey=Gene;gene=sigY;gene_biotype=protein_coding;locus_tag=NM058_01895 CP101611.1 Protein Homology CDS 362077 362613 . + 0 ID=cds-UTX05576.1;Parent=gene-NM058_01895;Dbxref=NCBI_GP:UTX05576.1;Name=UTX05576.1;gbkey=CDS;gene=sigY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391749.1;locus_tag=NM058_01895;product=RNA polymerase sigma factor SigY;protein_id=UTX05576.1;transl_table=11 CP101611.1 Genbank gene 362606 362926 . + . ID=gene-NM058_01900;Name=NM058_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01900 CP101611.1 Protein Homology CDS 362606 362926 . + 0 ID=cds-UTX05577.1;Parent=gene-NM058_01900;Dbxref=NCBI_GP:UTX05577.1;Name=UTX05577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014665907.1;locus_tag=NM058_01900;product=YxlC family protein;protein_id=UTX05577.1;transl_table=11 CP101611.1 Genbank gene 362923 363129 . + . ID=gene-NM058_01905;Name=NM058_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01905 CP101611.1 Protein Homology CDS 362923 363129 . + 0 ID=cds-UTX05578.1;Parent=gene-NM058_01905;Dbxref=NCBI_GP:UTX05578.1;Name=UTX05578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391747.1;locus_tag=NM058_01905;product=transcriptional regulator;protein_id=UTX05578.1;transl_table=11 CP101611.1 Genbank gene 363126 363314 . + . ID=gene-NM058_01910;Name=NM058_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01910 CP101611.1 Protein Homology CDS 363126 363314 . + 0 ID=cds-UTX05579.1;Parent=gene-NM058_01910;Dbxref=NCBI_GP:UTX05579.1;Name=UTX05579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391746.1;locus_tag=NM058_01910;product=PLD nuclease N-terminal domain-containing protein;protein_id=UTX05579.1;transl_table=11 CP101611.1 Genbank gene 363321 364208 . + . ID=gene-NM058_01915;Name=NM058_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01915 CP101611.1 Protein Homology CDS 363321 364208 . + 0 ID=cds-UTX05580.1;Parent=gene-NM058_01915;Dbxref=NCBI_GP:UTX05580.1;Name=UTX05580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391745.1;locus_tag=NM058_01915;product=ABC transporter ATP-binding protein;protein_id=UTX05580.1;transl_table=11 CP101611.1 Genbank gene 364205 364981 . + . ID=gene-NM058_01920;Name=NM058_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01920 CP101611.1 Protein Homology CDS 364205 364981 . + 0 ID=cds-UTX05581.1;Parent=gene-NM058_01920;Dbxref=NCBI_GP:UTX05581.1;Name=UTX05581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391744.2;locus_tag=NM058_01920;product=ABC transporter permease;protein_id=UTX05581.1;transl_table=11 CP101611.1 Genbank gene 364978 366180 . - . ID=gene-NM058_01925;Name=NM058_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01925 CP101611.1 Protein Homology CDS 364978 366180 . - 0 ID=cds-UTX05582.1;Parent=gene-NM058_01925;Dbxref=NCBI_GP:UTX05582.1;Name=UTX05582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391743.1;locus_tag=NM058_01925;product=MFS transporter;protein_id=UTX05582.1;transl_table=11 CP101611.1 Genbank gene 366281 367924 . - . ID=gene-NM058_01930;Name=katX;gbkey=Gene;gene=katX;gene_biotype=protein_coding;locus_tag=NM058_01930 CP101611.1 Protein Homology CDS 366281 367924 . - 0 ID=cds-UTX05583.1;Parent=gene-NM058_01930;Dbxref=NCBI_GP:UTX05583.1;Name=UTX05583.1;gbkey=CDS;gene=katX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391742.1;locus_tag=NM058_01930;product=catalase KatX;protein_id=UTX05583.1;transl_table=11 CP101611.1 Genbank gene 368071 368640 . + . ID=gene-NM058_01935;Name=NM058_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01935 CP101611.1 Protein Homology CDS 368071 368640 . + 0 ID=cds-UTX06940.1;Parent=gene-NM058_01935;Dbxref=NCBI_GP:UTX06940.1;Name=UTX06940.1;Ontology_term=GO:0006284,GO:0003677,GO:0003905;gbkey=CDS;go_function=DNA binding|0003677||IEA,alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003186302.1;locus_tag=NM058_01935;product=DNA-3-methyladenine glycosylase;protein_id=UTX06940.1;transl_table=11 CP101611.1 Genbank gene 368669 368827 . + . ID=gene-NM058_01940;Name=NM058_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01940 CP101611.1 Protein Homology CDS 368669 368827 . + 0 ID=cds-UTX06941.1;Parent=gene-NM058_01940;Dbxref=NCBI_GP:UTX06941.1;Name=UTX06941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391740.1;locus_tag=NM058_01940;product=hypothetical protein;protein_id=UTX06941.1;transl_table=11 CP101611.1 Genbank pseudogene 368990 370912 . + . ID=gene-NM058_01945;Name=licR;gbkey=Gene;gene=licR;gene_biotype=pseudogene;locus_tag=NM058_01945;pseudo=true CP101611.1 Protein Homology CDS 368990 370912 . + 0 ID=cds-NM058_01945;Parent=gene-NM058_01945;Note=frameshifted;gbkey=CDS;gene=licR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391739.1;locus_tag=NM058_01945;product=transcriptional regulator LicR;pseudo=true;transl_table=11 CP101611.1 Genbank gene 371041 371349 . + . ID=gene-NM058_01950;Name=licB;gbkey=Gene;gene=licB;gene_biotype=protein_coding;locus_tag=NM058_01950 CP101611.1 Protein Homology CDS 371041 371349 . + 0 ID=cds-UTX05584.1;Parent=gene-NM058_01950;Dbxref=NCBI_GP:UTX05584.1;Name=UTX05584.1;gbkey=CDS;gene=licB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391738.1;locus_tag=NM058_01950;product=PTS lichenan transporter subunit IIB;protein_id=UTX05584.1;transl_table=11 CP101611.1 Genbank pseudogene 371365 372722 . + . ID=gene-NM058_01955;Name=celB;gbkey=Gene;gene=celB;gene_biotype=pseudogene;locus_tag=NM058_01955;pseudo=true CP101611.1 Protein Homology CDS 371365 372722 . + 0 ID=cds-NM058_01955;Parent=gene-NM058_01955;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0019191;gbkey=CDS;gene=celB;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,cellobiose transmembrane transporter activity|0019191||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391737.1;locus_tag=NM058_01955;product=PTS cellobiose transporter subunit IIC;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 372741 373072 . + . ID=gene-NM058_01960;Name=licA;gbkey=Gene;gene=licA;gene_biotype=pseudogene;locus_tag=NM058_01960;pseudo=true CP101611.1 Protein Homology CDS 372741 373072 . + 0 ID=cds-NM058_01960;Parent=gene-NM058_01960;Note=frameshifted;gbkey=CDS;gene=licA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391736.1;locus_tag=NM058_01960;product=PTS lichenan transporter subunit IIA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 373069 374397 . + . ID=gene-NM058_01965;Name=licH;gbkey=Gene;gene=licH;gene_biotype=protein_coding;locus_tag=NM058_01965 CP101611.1 Protein Homology CDS 373069 374397 . + 0 ID=cds-UTX05585.1;Parent=gene-NM058_01965;Dbxref=NCBI_GP:UTX05585.1;Name=UTX05585.1;gbkey=CDS;gene=licH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391735.1;locus_tag=NM058_01965;product=6-phospho-beta-glucosidase LicH;protein_id=UTX05585.1;transl_table=11 CP101611.1 Genbank gene 374428 375519 . - . ID=gene-NM058_01970;Name=NM058_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01970 CP101611.1 Protein Homology CDS 374428 375519 . - 0 ID=cds-UTX05586.1;Parent=gene-NM058_01970;Dbxref=NCBI_GP:UTX05586.1;Name=UTX05586.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391734.2;locus_tag=NM058_01970;product=branched-chain amino acid aminotransferase;protein_id=UTX05586.1;transl_table=11 CP101611.1 Genbank gene 375661 376419 . - . ID=gene-NM058_01975;Name=NM058_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_01975 CP101611.1 Protein Homology CDS 375661 376419 . - 0 ID=cds-UTX05587.1;Parent=gene-NM058_01975;Dbxref=NCBI_GP:UTX05587.1;Name=UTX05587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391733.2;locus_tag=NM058_01975;product=SDR family oxidoreductase;protein_id=UTX05587.1;transl_table=11 CP101611.1 Genbank gene 376504 377682 . - . ID=gene-NM058_01980;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=NM058_01980 CP101611.1 Protein Homology CDS 376504 377682 . - 0 ID=cds-UTX05588.1;Parent=gene-NM058_01980;Dbxref=NCBI_GP:UTX05588.1;Name=UTX05588.1;Ontology_term=GO:0070394;gbkey=CDS;gene=dltD;go_process=lipoteichoic acid metabolic process|0070394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391732.1;locus_tag=NM058_01980;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=UTX05588.1;transl_table=11 CP101611.1 Genbank gene 377682 377918 . - . ID=gene-NM058_01985;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=NM058_01985 CP101611.1 Protein Homology CDS 377682 377918 . - 0 ID=cds-UTX05589.1;Parent=gene-NM058_01985;Dbxref=NCBI_GP:UTX05589.1;Name=UTX05589.1;gbkey=CDS;gene=dltC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391731.1;locus_tag=NM058_01985;product=D-alanine--poly(phosphoribitol) ligase subunit DltC;protein_id=UTX05589.1;transl_table=11 CP101611.1 Genbank gene 377935 379122 . - . ID=gene-NM058_01990;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=NM058_01990 CP101611.1 Protein Homology CDS 377935 379122 . - 0 ID=cds-UTX05590.1;Parent=gene-NM058_01990;Dbxref=NCBI_GP:UTX05590.1;Name=UTX05590.1;Ontology_term=GO:0070395,GO:0016746;gbkey=CDS;gene=dltB;go_function=acyltransferase activity|0016746||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391730.1;locus_tag=NM058_01990;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=UTX05590.1;transl_table=11 CP101611.1 Genbank gene 379119 380630 . - . ID=gene-NM058_01995;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=NM058_01995 CP101611.1 Protein Homology CDS 379119 380630 . - 0 ID=cds-UTX05591.1;Parent=gene-NM058_01995;Dbxref=NCBI_GP:UTX05591.1;Name=UTX05591.1;Ontology_term=GO:0019350,GO:0047473;gbkey=CDS;gene=dltA;go_function=D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391729.1;locus_tag=NM058_01995;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;protein_id=UTX05591.1;transl_table=11 CP101611.1 Genbank gene 380648 380797 . - . ID=gene-NM058_02000;Name=NM058_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02000 CP101611.1 Protein Homology CDS 380648 380797 . - 0 ID=cds-UTX05592.1;Parent=gene-NM058_02000;Dbxref=NCBI_GP:UTX05592.1;Name=UTX05592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097795.1;locus_tag=NM058_02000;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=UTX05592.1;transl_table=11 CP101611.1 Genbank gene 380947 381081 . + . ID=gene-NM058_02005;Name=NM058_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02005 CP101611.1 Protein Homology CDS 380947 381081 . + 0 ID=cds-UTX05593.1;Parent=gene-NM058_02005;Dbxref=NCBI_GP:UTX05593.1;Name=UTX05593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009514012.1;locus_tag=NM058_02005;product=hypothetical protein;protein_id=UTX05593.1;transl_table=11 CP101611.1 Genbank gene 381241 382176 . + . ID=gene-NM058_02010;Name=NM058_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02010 CP101611.1 Protein Homology CDS 381241 382176 . + 0 ID=cds-UTX05594.1;Parent=gene-NM058_02010;Dbxref=NCBI_GP:UTX05594.1;Name=UTX05594.1;Ontology_term=GO:0009234,GO:0046428,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase activity|0046428||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391728.1;locus_tag=NM058_02010;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=UTX05594.1;transl_table=11 CP101611.1 Genbank gene 382319 382951 . + . ID=gene-NM058_02015;Name=ywaC;gbkey=Gene;gene=ywaC;gene_biotype=protein_coding;locus_tag=NM058_02015 CP101611.1 Protein Homology CDS 382319 382951 . + 0 ID=cds-UTX05595.1;Parent=gene-NM058_02015;Dbxref=NCBI_GP:UTX05595.1;Name=UTX05595.1;gbkey=CDS;gene=ywaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391727.1;locus_tag=NM058_02015;product=GTP pyrophosphokinase YwaC;protein_id=UTX05595.1;transl_table=11 CP101611.1 Genbank gene 383090 384304 . + . ID=gene-NM058_02020;Name=NM058_02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02020 CP101611.1 Protein Homology CDS 383090 384304 . + 0 ID=cds-UTX05596.1;Parent=gene-NM058_02020;Dbxref=NCBI_GP:UTX05596.1;Name=UTX05596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259842.1;locus_tag=NM058_02020;product=MFS transporter;protein_id=UTX05596.1;transl_table=11 CP101611.1 Genbank gene 384288 384674 . + . ID=gene-NM058_02025;Name=NM058_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02025 CP101611.1 Protein Homology CDS 384288 384674 . + 0 ID=cds-UTX06942.1;Parent=gene-NM058_02025;Dbxref=NCBI_GP:UTX06942.1;Name=UTX06942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015387712.1;locus_tag=NM058_02025;product=carboxymuconolactone decarboxylase family protein;protein_id=UTX06942.1;transl_table=11 CP101611.1 Genbank pseudogene 384743 385580 . + . ID=gene-NM058_02030;Name=NM058_02030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02030;pseudo=true CP101611.1 Protein Homology CDS 384743 385580 . + 0 ID=cds-NM058_02030;Parent=gene-NM058_02030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259840.1;locus_tag=NM058_02030;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 385624 386990 . - . ID=gene-NM058_02035;Name=NM058_02035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02035;pseudo=true CP101611.1 Protein Homology CDS 385624 386990 . - 0 ID=cds-NM058_02035;Parent=gene-NM058_02035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391726.1;locus_tag=NM058_02035;product=M28 family metallopeptidase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 387145 388384 . - . ID=gene-NM058_02040;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=pseudogene;locus_tag=NM058_02040;pseudo=true CP101611.1 Protein Homology CDS 387145 388384 . - 0 ID=cds-NM058_02040;Parent=gene-NM058_02040;Note=frameshifted;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003244061.1;locus_tag=NM058_02040;product=tyrosine--tRNA ligase;pseudo=true;transl_table=11 CP101611.1 cmsearch binding_site 388429 388641 . - . ID=id-CP101611.1:388429..388641;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 CP101611.1 Genbank pseudogene 388636 389150 . - . ID=gene-NM058_02045;Name=ywaE;gbkey=Gene;gene=ywaE;gene_biotype=pseudogene;gene_synonym=tyrZR;locus_tag=NM058_02045;pseudo=true CP101611.1 Protein Homology CDS 388636 389150 . - 0 ID=cds-NM058_02045;Parent=gene-NM058_02045;Note=frameshifted;gbkey=CDS;gene=ywaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391724.1;locus_tag=NM058_02045;product=tyrZ transcriptional regulator YwaE;pseudo=true;transl_table=11 CP101611.1 Genbank gene 389301 390014 . + . ID=gene-NM058_02050;Name=NM058_02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02050 CP101611.1 Protein Homology CDS 389301 390014 . + 0 ID=cds-UTX05597.1;Parent=gene-NM058_02050;Dbxref=NCBI_GP:UTX05597.1;Name=UTX05597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391723.1;locus_tag=NM058_02050;product=TIGR02206 family membrane protein;protein_id=UTX05597.1;transl_table=11 CP101611.1 Genbank pseudogene 390125 390982 . + . ID=gene-NM058_02055;Name=NM058_02055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02055;pseudo=true CP101611.1 Protein Homology CDS 390125 390982 . + 0 ID=cds-NM058_02055;Parent=gene-NM058_02055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391722.1;locus_tag=NM058_02055;product=glycosyltransferase family 8 protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 391035 391877 . - . ID=gene-NM058_02060;Name=sacY;gbkey=Gene;gene=sacY;gene_biotype=protein_coding;locus_tag=NM058_02060 CP101611.1 Protein Homology CDS 391035 391877 . - 0 ID=cds-UTX05598.1;Parent=gene-NM058_02060;Dbxref=NCBI_GP:UTX05598.1;Name=UTX05598.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=sacY;go_function=RNA binding|0003723||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391721.1;locus_tag=NM058_02060;product=transcription antiterminator SacY;protein_id=UTX05598.1;transl_table=11 CP101611.1 Genbank pseudogene 391932 393311 . - . ID=gene-NM058_02065;Name=sacX;gbkey=Gene;gene=sacX;gene_biotype=pseudogene;locus_tag=NM058_02065;pseudo=true CP101611.1 Protein Homology CDS 391932 393311 . - 0 ID=cds-NM058_02065;Parent=gene-NM058_02065;Note=frameshifted;gbkey=CDS;gene=sacX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391720.1;locus_tag=NM058_02065;product=SacY negative regulator SacX;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 393761 395692 . - . ID=gene-NM058_02070;Name=NM058_02070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02070;pseudo=true CP101611.1 Protein Homology CDS 393761 395692 . - 0 ID=cds-NM058_02070;Parent=gene-NM058_02070;Note=frameshifted;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391719.1;locus_tag=NM058_02070;product=S8 family serine peptidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 395919 397253 . + . ID=gene-NM058_02075;Name=celB;gbkey=Gene;gene=celB;gene_biotype=protein_coding;locus_tag=NM058_02075 CP101611.1 Protein Homology CDS 395919 397253 . + 0 ID=cds-UTX05599.1;Parent=gene-NM058_02075;Dbxref=NCBI_GP:UTX05599.1;Name=UTX05599.1;Ontology_term=GO:0009401,GO:0008982,GO:0019191;gbkey=CDS;gene=celB;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,cellobiose transmembrane transporter activity|0019191||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236080.1;locus_tag=NM058_02075;product=PTS cellobiose transporter subunit IIC;protein_id=UTX05599.1;transl_table=11 CP101611.1 Genbank gene 397324 398001 . + . ID=gene-NM058_02080;Name=NM058_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02080 CP101611.1 Protein Homology CDS 397324 398001 . + 0 ID=cds-UTX06943.1;Parent=gene-NM058_02080;Dbxref=NCBI_GP:UTX06943.1;Name=UTX06943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391717.1;locus_tag=NM058_02080;product=DUF2711 domain-containing protein;protein_id=UTX06943.1;transl_table=11 CP101611.1 Genbank gene 398033 398413 . - . ID=gene-NM058_02085;Name=glxA;gbkey=Gene;gene=glxA;gene_biotype=protein_coding;locus_tag=NM058_02085 CP101611.1 Protein Homology CDS 398033 398413 . - 0 ID=cds-UTX05600.1;Parent=gene-NM058_02085;Dbxref=NCBI_GP:UTX05600.1;Name=UTX05600.1;gbkey=CDS;gene=glxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391716.1;locus_tag=NM058_02085;product=glyoxalase GlxA;protein_id=UTX05600.1;transl_table=11 CP101611.1 Genbank gene 398534 399721 . + . ID=gene-NM058_02090;Name=NM058_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02090 CP101611.1 Protein Homology CDS 398534 399721 . + 0 ID=cds-UTX05601.1;Parent=gene-NM058_02090;Dbxref=NCBI_GP:UTX05601.1;Name=UTX05601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391715.1;locus_tag=NM058_02090;product=class I SAM-dependent rRNA methyltransferase;protein_id=UTX05601.1;transl_table=11 CP101611.1 Genbank gene 399752 399949 . - . ID=gene-NM058_02095;Name=NM058_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02095 CP101611.1 Protein Homology CDS 399752 399949 . - 0 ID=cds-UTX05602.1;Parent=gene-NM058_02095;Dbxref=NCBI_GP:UTX05602.1;Name=UTX05602.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391714.1;locus_tag=NM058_02095;product=YwbE family protein;protein_id=UTX05602.1;transl_table=11 CP101611.1 Genbank pseudogene 399986 401189 . - . ID=gene-NM058_02100;Name=NM058_02100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02100;pseudo=true CP101611.1 Protein Homology CDS 399986 401189 . - 0 ID=cds-NM058_02100;Parent=gene-NM058_02100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391713.1;locus_tag=NM058_02100;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 401296 401970 . - . ID=gene-NM058_02105;Name=NM058_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02105 CP101611.1 Protein Homology CDS 401296 401970 . - 0 ID=cds-UTX05603.1;Parent=gene-NM058_02105;Dbxref=NCBI_GP:UTX05603.1;Name=UTX05603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391712.2;locus_tag=NM058_02105;product=CidB/LrgB family autolysis modulator;protein_id=UTX05603.1;transl_table=11 CP101611.1 Genbank gene 401952 402338 . - . ID=gene-NM058_02110;Name=NM058_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02110 CP101611.1 Protein Homology CDS 401952 402338 . - 0 ID=cds-UTX05604.1;Parent=gene-NM058_02110;Dbxref=NCBI_GP:UTX05604.1;Name=UTX05604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391711.1;locus_tag=NM058_02110;product=CidA/LrgA family holin-like protein;protein_id=UTX05604.1;transl_table=11 CP101611.1 Genbank gene 402444 403349 . + . ID=gene-NM058_02115;Name=NM058_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02115 CP101611.1 Protein Homology CDS 402444 403349 . + 0 ID=cds-UTX05605.1;Parent=gene-NM058_02115;Dbxref=NCBI_GP:UTX05605.1;Name=UTX05605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391710.1;locus_tag=NM058_02115;product=LysR family transcriptional regulator;protein_id=UTX05605.1;transl_table=11 CP101611.1 Genbank gene 403357 404175 . + . ID=gene-NM058_02120;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=NM058_02120 CP101611.1 Protein Homology CDS 403357 404175 . + 0 ID=cds-UTX05606.1;Parent=gene-NM058_02120;Dbxref=NCBI_GP:UTX05606.1;Name=UTX05606.1;gbkey=CDS;gene=thiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391709.1;locus_tag=NM058_02120;product=hydroxyethylthiazole kinase;protein_id=UTX05606.1;transl_table=11 CP101611.1 Genbank gene 404172 404840 . + . ID=gene-NM058_02125;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=NM058_02125 CP101611.1 Protein Homology CDS 404172 404840 . + 0 ID=cds-UTX05607.1;Parent=gene-NM058_02125;Dbxref=NCBI_GP:UTX05607.1;Name=UTX05607.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391708.1;locus_tag=NM058_02125;product=thiamine phosphate synthase;protein_id=UTX05607.1;transl_table=11 CP101611.1 Genbank gene 404997 406442 . + . ID=gene-NM058_02130;Name=efeU;gbkey=Gene;gene=efeU;gene_biotype=protein_coding;locus_tag=NM058_02130 CP101611.1 Protein Homology CDS 404997 406442 . + 0 ID=cds-UTX06944.1;Parent=gene-NM058_02130;Dbxref=NCBI_GP:UTX06944.1;Name=UTX06944.1;gbkey=CDS;gene=efeU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391707.2;locus_tag=NM058_02130;product=ferrous ion permease EfeU;protein_id=UTX06944.1;transl_table=11 CP101611.1 Genbank pseudogene 406439 407593 . + . ID=gene-NM058_02135;Name=efeM;gbkey=Gene;gene=efeM;gene_biotype=pseudogene;locus_tag=NM058_02135;pseudo=true CP101611.1 Protein Homology CDS 406439 407593 . + 0 ID=cds-NM058_02135;Parent=gene-NM058_02135;Note=frameshifted;gbkey=CDS;gene=efeM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391706.1;locus_tag=NM058_02135;product=iron uptake system lipoprotein EfeM;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 407612 408861 . + . ID=gene-NM058_02140;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=pseudogene;locus_tag=NM058_02140;pseudo=true CP101611.1 Protein Homology CDS 407612 408861 . + 0 ID=cds-NM058_02140;Parent=gene-NM058_02140;Note=frameshifted;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391705.1;locus_tag=NM058_02140;product=iron uptake transporter deferrochelatase/peroxidase subunit;pseudo=true;transl_table=11 CP101611.1 Genbank gene 408950 409552 . + . ID=gene-NM058_02145;Name=NM058_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02145 CP101611.1 Protein Homology CDS 408950 409552 . + 0 ID=cds-UTX05608.1;Parent=gene-NM058_02145;Dbxref=NCBI_GP:UTX05608.1;Name=UTX05608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391704.1;locus_tag=NM058_02145;product=DsbA family protein;protein_id=UTX05608.1;transl_table=11 CP101611.1 Genbank gene 409582 411123 . - . ID=gene-NM058_02150;Name=NM058_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02150 CP101611.1 Protein Homology CDS 409582 411123 . - 0 ID=cds-UTX05609.1;Parent=gene-NM058_02150;Dbxref=NCBI_GP:UTX05609.1;Name=UTX05609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391703.2;locus_tag=NM058_02150;product=cation acetate symporter;protein_id=UTX05609.1;transl_table=11 CP101611.1 Genbank gene 411120 411428 . - . ID=gene-NM058_02155;Name=NM058_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02155 CP101611.1 Protein Homology CDS 411120 411428 . - 0 ID=cds-UTX05610.1;Parent=gene-NM058_02155;Dbxref=NCBI_GP:UTX05610.1;Name=UTX05610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391702.1;locus_tag=NM058_02155;product=DUF485 domain-containing protein;protein_id=UTX05610.1;transl_table=11 CP101611.1 Genbank gene 411871 412029 . - . ID=gene-NM058_02160;Name=NM058_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02160 CP101611.1 Protein Homology CDS 411871 412029 . - 0 ID=cds-UTX05611.1;Parent=gene-NM058_02160;Dbxref=NCBI_GP:UTX05611.1;Name=UTX05611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097794.1;locus_tag=NM058_02160;product=anti-repressor SinI family protein;protein_id=UTX05611.1;transl_table=11 CP101611.1 Genbank pseudogene 412382 413052 . + . ID=gene-NM058_02165;Name=NM058_02165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02165;pseudo=true CP101611.1 Protein Homology CDS 412382 413052 . + 0 ID=cds-NM058_02165;Parent=gene-NM058_02165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391701.2;locus_tag=NM058_02165;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank gene 413070 413453 . + . ID=gene-NM058_02170;Name=NM058_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02170 CP101611.1 Protein Homology CDS 413070 413453 . + 0 ID=cds-UTX06945.1;Parent=gene-NM058_02170;Dbxref=NCBI_GP:UTX06945.1;Name=UTX06945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391700.1;locus_tag=NM058_02170;product=GtrA family protein;protein_id=UTX06945.1;transl_table=11 CP101611.1 Genbank gene 413538 414710 . + . ID=gene-NM058_02175;Name=NM058_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02175 CP101611.1 Protein Homology CDS 413538 414710 . + 0 ID=cds-UTX05612.1;Parent=gene-NM058_02175;Dbxref=NCBI_GP:UTX05612.1;Name=UTX05612.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391699.1;locus_tag=NM058_02175;product=galactokinase;protein_id=UTX05612.1;transl_table=11 CP101611.1 Genbank gene 414714 416255 . + . ID=gene-NM058_02180;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=NM058_02180 CP101611.1 Protein Homology CDS 414714 416255 . + 0 ID=cds-UTX05613.1;Parent=gene-NM058_02180;Dbxref=NCBI_GP:UTX05613.1;Name=UTX05613.1;Ontology_term=GO:0019388,GO:0017103;gbkey=CDS;gene=galT;go_function=UTP:galactose-1-phosphate uridylyltransferase activity|0017103||IEA;go_process=galactose catabolic process|0019388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391698.2;locus_tag=NM058_02180;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=UTX05613.1;transl_table=11 CP101611.1 Genbank gene 416326 416571 . - . ID=gene-NM058_02185;Name=NM058_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02185 CP101611.1 Protein Homology CDS 416326 416571 . - 0 ID=cds-UTX06946.1;Parent=gene-NM058_02185;Dbxref=NCBI_GP:UTX06946.1;Name=UTX06946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391697.2;locus_tag=NM058_02185;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=UTX06946.1;transl_table=11 CP101611.1 Genbank gene 417085 418050 . + . ID=gene-NM058_02190;Name=qoxA;gbkey=Gene;gene=qoxA;gene_biotype=protein_coding;locus_tag=NM058_02190 CP101611.1 Protein Homology CDS 417085 418050 . + 0 ID=cds-UTX06947.1;Parent=gene-NM058_02190;Dbxref=NCBI_GP:UTX06947.1;Name=UTX06947.1;Ontology_term=GO:0015990,GO:0009055,GO:0015078,GO:0016682,GO:0016021;gbkey=CDS;gene=qoxA;go_component=integral component of membrane|0016021||IEA;go_function=electron transfer activity|0009055||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391696.2;locus_tag=NM058_02190;product=cytochrome aa3 quinol oxidase subunit II;protein_id=UTX06947.1;transl_table=11 CP101611.1 Genbank gene 418078 420027 . + . ID=gene-NM058_02195;Name=qoxB;gbkey=Gene;gene=qoxB;gene_biotype=protein_coding;locus_tag=NM058_02195 CP101611.1 Protein Homology CDS 418078 420027 . + 0 ID=cds-UTX05614.1;Parent=gene-NM058_02195;Dbxref=NCBI_GP:UTX05614.1;Name=UTX05614.1;Ontology_term=GO:0015990,GO:0004129;gbkey=CDS;gene=qoxB;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391695.1;locus_tag=NM058_02195;product=cytochrome aa3 quinol oxidase subunit I;protein_id=UTX05614.1;transl_table=11 CP101611.1 Genbank gene 420041 420655 . + . ID=gene-NM058_02200;Name=qoxC;gbkey=Gene;gene=qoxC;gene_biotype=protein_coding;locus_tag=NM058_02200 CP101611.1 Protein Homology CDS 420041 420655 . + 0 ID=cds-UTX05615.1;Parent=gene-NM058_02200;Dbxref=NCBI_GP:UTX05615.1;Name=UTX05615.1;Ontology_term=GO:0015990,GO:0015078,GO:0016682;gbkey=CDS;gene=qoxC;go_function=proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391694.1;locus_tag=NM058_02200;product=cytochrome aa3 quinol oxidase subunit III;protein_id=UTX05615.1;transl_table=11 CP101611.1 Genbank gene 420657 421031 . + . ID=gene-NM058_02205;Name=qoxD;gbkey=Gene;gene=qoxD;gene_biotype=protein_coding;locus_tag=NM058_02205 CP101611.1 Protein Homology CDS 420657 421031 . + 0 ID=cds-UTX05616.1;Parent=gene-NM058_02205;Dbxref=NCBI_GP:UTX05616.1;Name=UTX05616.1;Ontology_term=GO:0015990,GO:0015078,GO:0016682;gbkey=CDS;gene=qoxD;go_function=proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391693.1;locus_tag=NM058_02205;product=cytochrome aa3 quinol oxidase subunit IV;protein_id=UTX05616.1;transl_table=11 CP101611.1 Genbank gene 421073 421336 . - . ID=gene-NM058_02210;Name=ywcE;gbkey=Gene;gene=ywcE;gene_biotype=protein_coding;locus_tag=NM058_02210 CP101611.1 Protein Homology CDS 421073 421336 . - 0 ID=cds-UTX05617.1;Parent=gene-NM058_02210;Dbxref=NCBI_GP:UTX05617.1;Name=UTX05617.1;gbkey=CDS;gene=ywcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391692.1;locus_tag=NM058_02210;product=spore morphogenesis/germination protein YwcE;protein_id=UTX05617.1;transl_table=11 CP101611.1 Genbank pseudogene 421842 423018 . + . ID=gene-NM058_02215;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=pseudogene;locus_tag=NM058_02215;pseudo=true CP101611.1 Protein Homology CDS 421842 423018 . + 0 ID=cds-NM058_02215;Parent=gene-NM058_02215;Note=frameshifted;gbkey=CDS;gene=rodA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391691.1;locus_tag=NM058_02215;product=cell shape-determining peptidoglycan glycosyltransferase RodA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 423127 423876 . + . ID=gene-NM058_02220;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=NM058_02220 CP101611.1 Protein Homology CDS 423127 423876 . + 0 ID=cds-UTX05618.1;Parent=gene-NM058_02220;Dbxref=NCBI_GP:UTX05618.1;Name=UTX05618.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391690.1;locus_tag=NM058_02220;product=oxygen-insensitive NADPH nitroreductase;protein_id=UTX05618.1;transl_table=11 CP101611.1 Genbank gene 424051 425052 . + . ID=gene-NM058_02225;Name=NM058_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02225 CP101611.1 Protein Homology CDS 424051 425052 . + 0 ID=cds-UTX05619.1;Parent=gene-NM058_02225;Dbxref=NCBI_GP:UTX05619.1;Name=UTX05619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391689.1;locus_tag=NM058_02225;product=LLM class flavin-dependent oxidoreductase;protein_id=UTX05619.1;transl_table=11 CP101611.1 Genbank gene 425088 427508 . - . ID=gene-NM058_02230;Name=vpr;gbkey=Gene;gene=vpr;gene_biotype=protein_coding;locus_tag=NM058_02230 CP101611.1 Protein Homology CDS 425088 427508 . - 0 ID=cds-UTX05620.1;Parent=gene-NM058_02230;Dbxref=NCBI_GP:UTX05620.1;Name=UTX05620.1;gbkey=CDS;gene=vpr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391688.1;locus_tag=NM058_02230;product=serine protease Vpr;protein_id=UTX05620.1;transl_table=11 CP101611.1 Genbank gene 428037 428339 . + . ID=gene-NM058_02235;Name=NM058_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02235 CP101611.1 Protein Homology CDS 428037 428339 . + 0 ID=cds-UTX05621.1;Parent=gene-NM058_02235;Dbxref=NCBI_GP:UTX05621.1;Name=UTX05621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391687.2;locus_tag=NM058_02235;product=hypothetical protein;protein_id=UTX05621.1;transl_table=11 CP101611.1 Genbank pseudogene 428379 429208 . + . ID=gene-NM058_02240;Name=sacT;gbkey=Gene;gene=sacT;gene_biotype=pseudogene;locus_tag=NM058_02240;pseudo=true CP101611.1 Protein Homology CDS 428379 429208 . + 0 ID=cds-NM058_02240;Parent=gene-NM058_02240;Note=frameshifted;gbkey=CDS;gene=sacT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391686.1;locus_tag=NM058_02240;product=sac operon transcriptional antiterminator SacT;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 429248 430017 . - . ID=gene-NM058_02245;Name=NM058_02245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02245;pseudo=true CP101611.1 Protein Homology CDS 429248 430017 . - 0 ID=cds-NM058_02245;Parent=gene-NM058_02245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391685.1;locus_tag=NM058_02245;product=formate/nitrite transporter family protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 430315 431698 . + . ID=gene-NM058_02250;Name=scrA;gbkey=Gene;gene=scrA;gene_biotype=pseudogene;locus_tag=NM058_02250;pseudo=true CP101611.1 Protein Homology CDS 430315 431698 . + 0 ID=cds-NM058_02250;Parent=gene-NM058_02250;Note=frameshifted;gbkey=CDS;gene=scrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391684.3;locus_tag=NM058_02250;product=PTS system sucrose transporter subunit IIBC;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 431695 433132 . + . ID=gene-NM058_02255;Name=sacA;gbkey=Gene;gene=sacA;gene_biotype=pseudogene;locus_tag=NM058_02255;pseudo=true CP101611.1 Protein Homology CDS 431695 433132 . + 0 ID=cds-NM058_02255;Parent=gene-NM058_02255;Note=frameshifted;Ontology_term=GO:0005985,GO:0004564;gbkey=CDS;gene=sacA;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=sucrose metabolic process|0005985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391683.2;locus_tag=NM058_02255;product=sucrose-6-phosphate hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 433226 433474 . + . ID=gene-NM058_02260;Name=NM058_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02260 CP101611.1 Protein Homology CDS 433226 433474 . + 0 ID=cds-UTX05622.1;Parent=gene-NM058_02260;Dbxref=NCBI_GP:UTX05622.1;Name=UTX05622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391682.1;locus_tag=NM058_02260;product=hypothetical protein;protein_id=UTX05622.1;transl_table=11 CP101611.1 Genbank gene 433568 434377 . - . ID=gene-NM058_02265;Name=NM058_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02265 CP101611.1 Protein Homology CDS 433568 434377 . - 0 ID=cds-UTX05623.1;Parent=gene-NM058_02265;Dbxref=NCBI_GP:UTX05623.1;Name=UTX05623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391681.1;locus_tag=NM058_02265;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=UTX05623.1;transl_table=11 CP101611.1 Genbank gene 434568 435374 . + . ID=gene-NM058_02270;Name=NM058_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02270 CP101611.1 Protein Homology CDS 434568 435374 . + 0 ID=cds-UTX05624.1;Parent=gene-NM058_02270;Dbxref=NCBI_GP:UTX05624.1;Name=UTX05624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391677.1;locus_tag=NM058_02270;product=glycosyltransferase;protein_id=UTX05624.1;transl_table=11 CP101611.1 Genbank gene 435389 436066 . + . ID=gene-NM058_02275;Name=NM058_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02275 CP101611.1 Protein Homology CDS 435389 436066 . + 0 ID=cds-UTX05625.1;Parent=gene-NM058_02275;Dbxref=NCBI_GP:UTX05625.1;Name=UTX05625.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391676.1;locus_tag=NM058_02275;product=uracil-DNA glycosylase;protein_id=UTX05625.1;transl_table=11 CP101611.1 Genbank pseudogene 436091 437459 . - . ID=gene-NM058_02280;Name=NM058_02280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02280;pseudo=true CP101611.1 Protein Homology CDS 436091 437459 . - 0 ID=cds-NM058_02280;Parent=gene-NM058_02280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391675.2;locus_tag=NM058_02280;product=aldehyde dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 437626 437943 . + . ID=gene-NM058_02285;Name=NM058_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02285 CP101611.1 Protein Homology CDS 437626 437943 . + 0 ID=cds-UTX05626.1;Parent=gene-NM058_02285;Dbxref=NCBI_GP:UTX05626.1;Name=UTX05626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391674.3;locus_tag=NM058_02285;product=YwdI family protein;protein_id=UTX05626.1;transl_table=11 CP101611.1 Genbank gene 437963 439285 . + . ID=gene-NM058_02290;Name=NM058_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02290 CP101611.1 Protein Homology CDS 437963 439285 . + 0 ID=cds-UTX05627.1;Parent=gene-NM058_02290;Dbxref=NCBI_GP:UTX05627.1;Name=UTX05627.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391673.2;locus_tag=NM058_02290;product=purine/pyrimidine permease;protein_id=UTX05627.1;transl_table=11 CP101611.1 Genbank gene 439347 439718 . + . ID=gene-NM058_02295;Name=NM058_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02295 CP101611.1 Protein Homology CDS 439347 439718 . + 0 ID=cds-UTX05628.1;Parent=gene-NM058_02295;Dbxref=NCBI_GP:UTX05628.1;Name=UTX05628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391672.2;locus_tag=NM058_02295;product=DUF423 domain-containing protein;protein_id=UTX05628.1;transl_table=11 CP101611.1 Genbank pseudogene 439762 440290 . - . ID=gene-NM058_02300;Name=gerQ;gbkey=Gene;gene=gerQ;gene_biotype=pseudogene;locus_tag=NM058_02300;pseudo=true CP101611.1 Protein Homology CDS 439762 440290 . - 0 ID=cds-NM058_02300;Parent=gene-NM058_02300;Note=frameshifted;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=gerQ;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391671.1;locus_tag=NM058_02300;product=spore coat protein GerQ;pseudo=true;transl_table=11 CP101611.1 Genbank gene 440609 441379 . + . ID=gene-NM058_02305;Name=spsA;gbkey=Gene;gene=spsA;gene_biotype=protein_coding;locus_tag=NM058_02305 CP101611.1 Protein Homology CDS 440609 441379 . + 0 ID=cds-UTX05629.1;Parent=gene-NM058_02305;Dbxref=NCBI_GP:UTX05629.1;Name=UTX05629.1;gbkey=CDS;gene=spsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391670.1;locus_tag=NM058_02305;product=spore coat dTDP-glycosyltransferase SpsA;protein_id=UTX05629.1;transl_table=11 CP101611.1 Genbank gene 441384 442808 . + . ID=gene-NM058_02310;Name=NM058_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02310 CP101611.1 Protein Homology CDS 441384 442808 . + 0 ID=cds-UTX05630.1;Parent=gene-NM058_02310;Dbxref=NCBI_GP:UTX05630.1;Name=UTX05630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391669.2;locus_tag=NM058_02310;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=UTX05630.1;transl_table=11 CP101611.1 Genbank pseudogene 442810 442881 . + . ID=gene-NM058_02315;Name=NM058_02315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02315;pseudo=true CP101611.1 Protein Homology CDS 442810 442881 . + 0 ID=cds-NM058_02315;Parent=gene-NM058_02315;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013227.2;locus_tag=NM058_02315;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 442924 443181 . + . ID=gene-NM058_02320;Name=NM058_02320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02320;pseudo=true CP101611.1 Protein Homology CDS 442924 443181 . + 0 ID=cds-NM058_02320;Parent=gene-NM058_02320;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391668.1;locus_tag=NM058_02320;product=DegT/DnrJ/EryC1/StrS family aminotransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 443169 444038 . + . ID=gene-NM058_02325;Name=NM058_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02325 CP101611.1 Protein Homology CDS 443169 444038 . + 0 ID=cds-UTX05631.1;Parent=gene-NM058_02325;Dbxref=NCBI_GP:UTX05631.1;Name=UTX05631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391667.1;locus_tag=NM058_02325;product=GNAT family N-acetyltransferase;protein_id=UTX05631.1;transl_table=11 CP101611.1 Genbank pseudogene 444112 444329 . + . ID=gene-NM058_02330;Name=NM058_02330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02330;pseudo=true CP101611.1 Protein Homology CDS 444112 444329 . + 0 ID=cds-NM058_02330;Parent=gene-NM058_02330;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391664.1;locus_tag=NM058_02330;product=spore coat protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 444479 445219 . + . ID=gene-NM058_02335;Name=NM058_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02335 CP101611.1 Protein Homology CDS 444479 445219 . + 0 ID=cds-UTX05632.1;Parent=gene-NM058_02335;Dbxref=NCBI_GP:UTX05632.1;Name=UTX05632.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391663.1;locus_tag=NM058_02335;product=sugar phosphate nucleotidyltransferase;protein_id=UTX05632.1;transl_table=11 CP101611.1 Genbank gene 445219 446166 . + . ID=gene-NM058_02340;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=NM058_02340 CP101611.1 Protein Homology CDS 445219 446166 . + 0 ID=cds-UTX05633.1;Parent=gene-NM058_02340;Dbxref=NCBI_GP:UTX05633.1;Name=UTX05633.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391662.1;locus_tag=NM058_02340;product=dTDP-glucose 4%2C6-dehydratase;protein_id=UTX05633.1;transl_table=11 CP101611.1 Genbank gene 446180 447031 . + . ID=gene-NM058_02345;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=NM058_02345 CP101611.1 Protein Homology CDS 446180 447031 . + 0 ID=cds-UTX05634.1;Parent=gene-NM058_02345;Dbxref=NCBI_GP:UTX05634.1;Name=UTX05634.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391661.3;locus_tag=NM058_02345;product=dTDP-4-dehydrorhamnose reductase;protein_id=UTX05634.1;transl_table=11 CP101611.1 Genbank gene 447024 447479 . + . ID=gene-NM058_02350;Name=NM058_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02350 CP101611.1 Protein Homology CDS 447024 447479 . + 0 ID=cds-UTX05635.1;Parent=gene-NM058_02350;Dbxref=NCBI_GP:UTX05635.1;Name=UTX05635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054595.1;locus_tag=NM058_02350;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase family protein;protein_id=UTX05635.1;transl_table=11 CP101611.1 Genbank gene 447802 448266 . + . ID=gene-NM058_02355;Name=bslB;gbkey=Gene;gene=bslB;gene_biotype=protein_coding;locus_tag=NM058_02355 CP101611.1 Protein Homology CDS 447802 448266 . + 0 ID=cds-UTX05636.1;Parent=gene-NM058_02355;Dbxref=NCBI_GP:UTX05636.1;Name=UTX05636.1;gbkey=CDS;gene=bslB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391660.1;locus_tag=NM058_02355;product=biofilm-surface layer protein BslB;protein_id=UTX05636.1;transl_table=11 CP101611.1 Genbank gene 448443 449717 . + . ID=gene-NM058_02360;Name=rocG;gbkey=Gene;gene=rocG;gene_biotype=protein_coding;locus_tag=NM058_02360 CP101611.1 Protein Homology CDS 448443 449717 . + 0 ID=cds-UTX05637.1;Parent=gene-NM058_02360;Dbxref=NCBI_GP:UTX05637.1;Name=UTX05637.1;gbkey=CDS;gene=rocG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391659.2;locus_tag=NM058_02360;product=glutamate dehydrogenase;protein_id=UTX05637.1;transl_table=11 CP101611.1 Genbank gene 449957 451504 . + . ID=gene-NM058_02365;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=NM058_02365 CP101611.1 Protein Homology CDS 449957 451504 . + 0 ID=cds-UTX05638.1;Parent=gene-NM058_02365;Dbxref=NCBI_GP:UTX05638.1;Name=UTX05638.1;Ontology_term=GO:0006562,GO:0003842;gbkey=CDS;gene=pruA;go_function=1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA;go_process=proline catabolic process|0006562||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391658.1;locus_tag=NM058_02365;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=UTX05638.1;transl_table=11 CP101611.1 Genbank gene 451579 453276 . + . ID=gene-NM058_02370;Name=NM058_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02370 CP101611.1 Protein Homology CDS 451579 453276 . + 0 ID=cds-UTX05639.1;Parent=gene-NM058_02370;Dbxref=NCBI_GP:UTX05639.1;Name=UTX05639.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391657.1;locus_tag=NM058_02370;product=M20/M25/M40 family metallo-hydrolase;protein_id=UTX05639.1;transl_table=11 CP101611.1 Genbank pseudogene 453276 454687 . + . ID=gene-NM058_02375;Name=NM058_02375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02375;pseudo=true CP101611.1 Protein Homology CDS 453276 454687 . + 0 ID=cds-NM058_02375;Parent=gene-NM058_02375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391656.1;locus_tag=NM058_02375;product=amino acid permease;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 454893 456129 . + . ID=gene-NM058_02380;Name=NM058_02380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02380;pseudo=true CP101611.1 Protein Homology CDS 454893 456129 . + 0 ID=cds-NM058_02380;Parent=gene-NM058_02380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391655.1;locus_tag=NM058_02380;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 456281 456895 . + . ID=gene-NM058_02385;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=NM058_02385 CP101611.1 Protein Homology CDS 456281 456895 . + 0 ID=cds-UTX05640.1;Parent=gene-NM058_02385;Dbxref=NCBI_GP:UTX05640.1;Name=UTX05640.1;gbkey=CDS;gene=bacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391654.1;locus_tag=NM058_02385;product=prephenate decarboxylase;protein_id=UTX05640.1;transl_table=11 CP101611.1 Genbank gene 456885 457592 . + . ID=gene-NM058_02390;Name=bacB;gbkey=Gene;gene=bacB;gene_biotype=protein_coding;locus_tag=NM058_02390 CP101611.1 Protein Homology CDS 456885 457592 . + 0 ID=cds-UTX05641.1;Parent=gene-NM058_02390;Dbxref=NCBI_GP:UTX05641.1;Name=UTX05641.1;gbkey=CDS;gene=bacB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391653.1;locus_tag=NM058_02390;product=3-((4R)-4-hydroxycyclohexa-1%2C5-dien-1-yl)-2-oxopropanoate isomerase;protein_id=UTX05641.1;transl_table=11 CP101611.1 Genbank gene 457595 458356 . + . ID=gene-NM058_02395;Name=bacC;gbkey=Gene;gene=bacC;gene_biotype=protein_coding;locus_tag=NM058_02395 CP101611.1 Protein Homology CDS 457595 458356 . + 0 ID=cds-UTX05642.1;Parent=gene-NM058_02395;Dbxref=NCBI_GP:UTX05642.1;Name=UTX05642.1;gbkey=CDS;gene=bacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391652.2;locus_tag=NM058_02395;product=dihydroanticapsin 7-dehydrogenase;protein_id=UTX05642.1;transl_table=11 CP101611.1 Genbank pseudogene 458375 459790 . + . ID=gene-NM058_02400;Name=bacD;gbkey=Gene;gene=bacD;gene_biotype=pseudogene;locus_tag=NM058_02400;pseudo=true CP101611.1 Protein Homology CDS 458375 459790 . + 0 ID=cds-NM058_02400;Parent=gene-NM058_02400;Note=frameshifted;gbkey=CDS;gene=bacD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391651.1;locus_tag=NM058_02400;product=alanine--anticapsin ligase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 459787 460971 . + . ID=gene-NM058_02405;Name=bacE;gbkey=Gene;gene=bacE;gene_biotype=protein_coding;locus_tag=NM058_02405 CP101611.1 Protein Homology CDS 459787 460971 . + 0 ID=cds-UTX05643.1;Parent=gene-NM058_02405;Dbxref=NCBI_GP:UTX05643.1;Name=UTX05643.1;gbkey=CDS;gene=bacE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391650.1;locus_tag=NM058_02405;product=bacilysin exporter BacE;protein_id=UTX05643.1;transl_table=11 CP101611.1 Genbank pseudogene 460972 462170 . + . ID=gene-NM058_02410;Name=bacF;gbkey=Gene;gene=bacF;gene_biotype=pseudogene;locus_tag=NM058_02410;pseudo=true CP101611.1 Protein Homology CDS 460972 462170 . + 0 ID=cds-NM058_02410;Parent=gene-NM058_02410;Note=frameshifted;gbkey=CDS;gene=bacF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391649.1;locus_tag=NM058_02410;product=transaminase BacF;pseudo=true;transl_table=11 CP101611.1 Genbank gene 462184 462963 . - . ID=gene-NM058_02415;Name=bacG;gbkey=Gene;gene=bacG;gene_biotype=protein_coding;gene_synonym=ywfH;locus_tag=NM058_02415 CP101611.1 Protein Homology CDS 462184 462963 . - 0 ID=cds-UTX05644.1;Parent=gene-NM058_02415;Dbxref=NCBI_GP:UTX05644.1;Name=UTX05644.1;gbkey=CDS;gene=bacG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391648.1;locus_tag=NM058_02415;product=NADPH-dependent reductase BacG;protein_id=UTX05644.1;transl_table=11 CP101611.1 Genbank gene 463095 463859 . - . ID=gene-NM058_02420;Name=NM058_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02420 CP101611.1 Protein Homology CDS 463095 463859 . - 0 ID=cds-UTX05645.1;Parent=gene-NM058_02420;Dbxref=NCBI_GP:UTX05645.1;Name=UTX05645.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391647.3;locus_tag=NM058_02420;product=heme-dependent peroxidase;protein_id=UTX05645.1;transl_table=11 CP101611.1 Genbank gene 464130 465101 . + . ID=gene-NM058_02425;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=NM058_02425 CP101611.1 Protein Homology CDS 464130 465101 . + 0 ID=cds-UTX05646.1;Parent=gene-NM058_02425;Dbxref=NCBI_GP:UTX05646.1;Name=UTX05646.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391646.1;locus_tag=NM058_02425;product=phosphate acetyltransferase;protein_id=UTX05646.1;transl_table=11 CP101611.1 Genbank gene 465245 466144 . + . ID=gene-NM058_02430;Name=cysL;gbkey=Gene;gene=cysL;gene_biotype=protein_coding;locus_tag=NM058_02430 CP101611.1 Protein Homology CDS 465245 466144 . + 0 ID=cds-UTX05647.1;Parent=gene-NM058_02430;Dbxref=NCBI_GP:UTX05647.1;Name=UTX05647.1;gbkey=CDS;gene=cysL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391645.1;locus_tag=NM058_02430;product=cysJI operon transcriptional regulator CysL;protein_id=UTX05647.1;transl_table=11 CP101611.1 Genbank gene 466192 467037 . + . ID=gene-NM058_02435;Name=ywfL;gbkey=Gene;gene=ywfL;gene_biotype=protein_coding;locus_tag=NM058_02435 CP101611.1 Protein Homology CDS 466192 467037 . + 0 ID=cds-UTX05648.1;Parent=gene-NM058_02435;Dbxref=NCBI_GP:UTX05648.1;Name=UTX05648.1;gbkey=CDS;gene=ywfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391644.1;locus_tag=NM058_02435;product=octanoyl-[GcvH]:protein N-octanoyltransferase;protein_id=UTX05648.1;transl_table=11 CP101611.1 Genbank gene 467222 467647 . - . ID=gene-NM058_02440;Name=NM058_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02440 CP101611.1 GeneMarkS-2+ CDS 467222 467647 . - 0 ID=cds-UTX05649.1;Parent=gene-NM058_02440;Dbxref=NCBI_GP:UTX05649.1;Name=UTX05649.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_02440;product=hypothetical protein;protein_id=UTX05649.1;transl_table=11 CP101611.1 Genbank gene 467938 468786 . + . ID=gene-NM058_02445;Name=NM058_02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02445 CP101611.1 Protein Homology CDS 467938 468786 . + 0 ID=cds-UTX06948.1;Parent=gene-NM058_02445;Dbxref=NCBI_GP:UTX06948.1;Name=UTX06948.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391643.1;locus_tag=NM058_02445;product=carboxylate/amino acid/amine transporter;protein_id=UTX06948.1;transl_table=11 CP101611.1 Genbank pseudogene 468929 469704 . - . ID=gene-NM058_02450;Name=rsfA;gbkey=Gene;gene=rsfA;gene_biotype=pseudogene;gene_synonym=psrF;locus_tag=NM058_02450;pseudo=true CP101611.1 Protein Homology CDS 468929 469704 . - 0 ID=cds-NM058_02450;Parent=gene-NM058_02450;Note=frameshifted;gbkey=CDS;gene=rsfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391642.1;locus_tag=NM058_02450;product=prespore-specific transcription regulator RsfA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 469918 470142 . + . ID=gene-NM058_02455;Name=NM058_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02455 CP101611.1 Protein Homology CDS 469918 470142 . + 0 ID=cds-UTX05650.1;Parent=gene-NM058_02455;Dbxref=NCBI_GP:UTX05650.1;Name=UTX05650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391641.1;locus_tag=NM058_02455;product=YuzB family protein;protein_id=UTX05650.1;transl_table=11 CP101611.1 Genbank gene 470302 471603 . + . ID=gene-NM058_02460;Name=NM058_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02460 CP101611.1 Protein Homology CDS 470302 471603 . + 0 ID=cds-UTX05651.1;Parent=gene-NM058_02460;Dbxref=NCBI_GP:UTX05651.1;Name=UTX05651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391640.1;locus_tag=NM058_02460;product=HD domain-containing protein;protein_id=UTX05651.1;transl_table=11 CP101611.1 Genbank gene 471639 472139 . + . ID=gene-NM058_02465;Name=NM058_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02465 CP101611.1 Protein Homology CDS 471639 472139 . + 0 ID=cds-UTX05652.1;Parent=gene-NM058_02465;Dbxref=NCBI_GP:UTX05652.1;Name=UTX05652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391639.1;locus_tag=NM058_02465;product=YwgA family protein;protein_id=UTX05652.1;transl_table=11 CP101611.1 Genbank gene 472252 472725 . + . ID=gene-NM058_02470;Name=NM058_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02470 CP101611.1 Protein Homology CDS 472252 472725 . + 0 ID=cds-UTX06949.1;Parent=gene-NM058_02470;Dbxref=NCBI_GP:UTX06949.1;Name=UTX06949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259782.1;locus_tag=NM058_02470;product=Rrf2 family transcriptional regulator;protein_id=UTX06949.1;transl_table=11 CP101611.1 Genbank pseudogene 472722 474109 . + . ID=gene-NM058_02475;Name=NM058_02475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02475;pseudo=true CP101611.1 Protein Homology CDS 472722 474109 . + 0 ID=cds-NM058_02475;Parent=gene-NM058_02475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014478303.1;locus_tag=NM058_02475;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 474181 474336 . + . ID=gene-NM058_02480;Name=NM058_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02480 CP101611.1 Protein Homology CDS 474181 474336 . + 0 ID=cds-UTX05653.1;Parent=gene-NM058_02480;Dbxref=NCBI_GP:UTX05653.1;Name=UTX05653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014115569.1;locus_tag=NM058_02480;product=hypothetical protein;protein_id=UTX05653.1;transl_table=11 CP101611.1 cmsearch binding_site 474416 474638 . + . ID=id-CP101611.1:474416..474638;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 CP101611.1 cmsearch binding_site 474670 474892 . + . ID=id-CP101611.1:474670..474892;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 CP101611.1 Genbank pseudogene 474945 476859 . + . ID=gene-NM058_02485;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=pseudogene;locus_tag=NM058_02485;pseudo=true CP101611.1 Protein Homology CDS 474945 476859 . + 0 ID=cds-NM058_02485;Parent=gene-NM058_02485;Note=frameshifted;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391636.2;locus_tag=NM058_02485;product=threonine--tRNA ligase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 476979 477398 . + . ID=gene-NM058_02490;Name=NM058_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02490 CP101611.1 Protein Homology CDS 476979 477398 . + 0 ID=cds-UTX05654.1;Parent=gene-NM058_02490;Dbxref=NCBI_GP:UTX05654.1;Name=UTX05654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391635.1;locus_tag=NM058_02490;product=MarR family transcriptional regulator;protein_id=UTX05654.1;transl_table=11 CP101611.1 Genbank gene 477441 477629 . - . ID=gene-NM058_02495;Name=NM058_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02495 CP101611.1 Protein Homology CDS 477441 477629 . - 0 ID=cds-UTX05655.1;Parent=gene-NM058_02495;Dbxref=NCBI_GP:UTX05655.1;Name=UTX05655.1;Ontology_term=GO:0006725,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391634.1;locus_tag=NM058_02495;product=4-oxalocrotonate tautomerase;protein_id=UTX05655.1;transl_table=11 CP101611.1 Genbank gene 477738 478397 . + . ID=gene-NM058_02500;Name=NM058_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02500 CP101611.1 Protein Homology CDS 477738 478397 . + 0 ID=cds-UTX05656.1;Parent=gene-NM058_02500;Dbxref=NCBI_GP:UTX05656.1;Name=UTX05656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391633.1;locus_tag=NM058_02500;product=site-2 protease family protein;protein_id=UTX05656.1;transl_table=11 CP101611.1 Genbank gene 478379 478927 . + . ID=gene-NM058_02505;Name=NM058_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02505 CP101611.1 Protein Homology CDS 478379 478927 . + 0 ID=cds-UTX06950.1;Parent=gene-NM058_02505;Dbxref=NCBI_GP:UTX06950.1;Name=UTX06950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391632.1;locus_tag=NM058_02505;product=YwhD family protein;protein_id=UTX06950.1;transl_table=11 CP101611.1 Genbank pseudogene 479232 481305 . - . ID=gene-NM058_02510;Name=NM058_02510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02510;pseudo=true CP101611.1 Protein Homology CDS 479232 481305 . - 0 ID=cds-NM058_02510;Parent=gene-NM058_02510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391631.2;locus_tag=NM058_02510;product=penicillin-binding protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 481507 482337 . + . ID=gene-NM058_02515;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=NM058_02515 CP101611.1 Protein Homology CDS 481507 482337 . + 0 ID=cds-UTX05657.1;Parent=gene-NM058_02515;Dbxref=NCBI_GP:UTX05657.1;Name=UTX05657.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391630.1;locus_tag=NM058_02515;product=spermidine synthase;protein_id=UTX05657.1;transl_table=11 CP101611.1 Genbank gene 482398 483270 . + . ID=gene-NM058_02520;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=NM058_02520 CP101611.1 Protein Homology CDS 482398 483270 . + 0 ID=cds-UTX05658.1;Parent=gene-NM058_02520;Dbxref=NCBI_GP:UTX05658.1;Name=UTX05658.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391629.1;locus_tag=NM058_02520;product=agmatinase;protein_id=UTX05658.1;transl_table=11 CP101611.1 Genbank pseudogene 483302 483764 . - . ID=gene-NM058_02525;Name=NM058_02525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02525;pseudo=true CP101611.1 Protein Homology CDS 483302 483764 . - 0 ID=cds-NM058_02525;Parent=gene-NM058_02525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391628.1;locus_tag=NM058_02525;product=YbaK/EbsC family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 483862 483981 . - . ID=gene-NM058_02530;Name=phrF;gbkey=Gene;gene=phrF;gene_biotype=protein_coding;locus_tag=NM058_02530 CP101611.1 Protein Homology CDS 483862 483981 . - 0 ID=cds-UTX05659.1;Parent=gene-NM058_02530;Dbxref=NCBI_GP:UTX05659.1;Name=UTX05659.1;gbkey=CDS;gene=phrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391627.1;locus_tag=NM058_02530;product=phosphatase RapF inhibitor PhrF;protein_id=UTX05659.1;transl_table=11 CP101611.1 Genbank gene 483965 485110 . - . ID=gene-NM058_02535;Name=rapF;gbkey=Gene;gene=rapF;gene_biotype=protein_coding;locus_tag=NM058_02535 CP101611.1 Protein Homology CDS 483965 485110 . - 0 ID=cds-UTX05660.1;Parent=gene-NM058_02535;Dbxref=NCBI_GP:UTX05660.1;Name=UTX05660.1;gbkey=CDS;gene=rapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391626.1;locus_tag=NM058_02535;product=response regulator aspartate phosphatase RapF;protein_id=UTX05660.1;transl_table=11 CP101611.1 Genbank gene 485340 486701 . + . ID=gene-NM058_02540;Name=NM058_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02540 CP101611.1 Protein Homology CDS 485340 486701 . + 0 ID=cds-UTX05661.1;Parent=gene-NM058_02540;Dbxref=NCBI_GP:UTX05661.1;Name=UTX05661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391625.1;locus_tag=NM058_02540;product=YncE family protein;protein_id=UTX05661.1;transl_table=11 CP101611.1 Genbank pseudogene 486741 488116 . + . ID=gene-NM058_02545;Name=NM058_02545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02545;pseudo=true CP101611.1 Protein Homology CDS 486741 488116 . + 0 ID=cds-NM058_02545;Parent=gene-NM058_02545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012118684.1;locus_tag=NM058_02545;product=YncE family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 488123 488824 . - . ID=gene-NM058_02550;Name=NM058_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02550 CP101611.1 Protein Homology CDS 488123 488824 . - 0 ID=cds-UTX05662.1;Parent=gene-NM058_02550;Dbxref=NCBI_GP:UTX05662.1;Name=UTX05662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391623.1;locus_tag=NM058_02550;product=bacteriocin biosynthesis protein AlbG;protein_id=UTX05662.1;transl_table=11 CP101611.1 Genbank gene 488821 490101 . - . ID=gene-NM058_02555;Name=NM058_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02555 CP101611.1 Protein Homology CDS 488821 490101 . - 0 ID=cds-UTX05663.1;Parent=gene-NM058_02555;Dbxref=NCBI_GP:UTX05663.1;Name=UTX05663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391622.1;locus_tag=NM058_02555;product=insulinase family protein;protein_id=UTX05663.1;transl_table=11 CP101611.1 Genbank gene 490106 491263 . - . ID=gene-NM058_02560;Name=NM058_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02560 CP101611.1 Protein Homology CDS 490106 491263 . - 0 ID=cds-UTX06951.1;Parent=gene-NM058_02560;Dbxref=NCBI_GP:UTX06951.1;Name=UTX06951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391621.1;locus_tag=NM058_02560;product=insulinase family protein;protein_id=UTX06951.1;transl_table=11 CP101611.1 Genbank gene 491253 492563 . - . ID=gene-NM058_02565;Name=albD;gbkey=Gene;gene=albD;gene_biotype=protein_coding;locus_tag=NM058_02565 CP101611.1 Protein Homology CDS 491253 492563 . - 0 ID=cds-UTX05664.1;Parent=gene-NM058_02565;Dbxref=NCBI_GP:UTX05664.1;Name=UTX05664.1;gbkey=CDS;gene=albD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391620.1;locus_tag=NM058_02565;product=antilisterial bacteriocin subtilosin biosynthesis protein AlbD;protein_id=UTX05664.1;transl_table=11 CP101611.1 Genbank gene 492556 493275 . - . ID=gene-NM058_02570;Name=NM058_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02570 CP101611.1 Protein Homology CDS 492556 493275 . - 0 ID=cds-UTX05665.1;Parent=gene-NM058_02570;Dbxref=NCBI_GP:UTX05665.1;Name=UTX05665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391619.1;locus_tag=NM058_02570;product=ABC transporter ATP-binding protein;protein_id=UTX05665.1;transl_table=11 CP101611.1 Genbank gene 493272 493433 . - . ID=gene-NM058_02575;Name=albB;gbkey=Gene;gene=albB;gene_biotype=protein_coding;locus_tag=NM058_02575 CP101611.1 Protein Homology CDS 493272 493433 . - 0 ID=cds-UTX05666.1;Parent=gene-NM058_02575;Dbxref=NCBI_GP:UTX05666.1;Name=UTX05666.1;gbkey=CDS;gene=albB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391618.1;locus_tag=NM058_02575;product=antilisterial bacteriocin subtilosin biosynthesis protein AlbB;protein_id=UTX05666.1;transl_table=11 CP101611.1 Genbank gene 493446 494792 . - . ID=gene-NM058_02580;Name=albA;gbkey=Gene;gene=albA;gene_biotype=protein_coding;locus_tag=NM058_02580 CP101611.1 Protein Homology CDS 493446 494792 . - 0 ID=cds-UTX05667.1;Parent=gene-NM058_02580;Dbxref=NCBI_GP:UTX05667.1;Name=UTX05667.1;gbkey=CDS;gene=albA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391617.1;locus_tag=NM058_02580;product=subtilosin maturase AlbA;protein_id=UTX05667.1;transl_table=11 CP101611.1 Genbank pseudogene 494863 494970 . - . ID=gene-NM058_02585;Name=NM058_02585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02585;pseudo=true CP101611.1 Protein Homology CDS 494863 494970 . - 0 ID=cds-NM058_02585;Parent=gene-NM058_02585;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054594.1;locus_tag=NM058_02585;product=bacteriocin biosynthesis protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 494927 495058 . - . ID=gene-NM058_02590;Name=sboA;gbkey=Gene;gene=sboA;gene_biotype=protein_coding;locus_tag=NM058_02590 CP101611.1 Protein Homology CDS 494927 495058 . - 0 ID=cds-UTX05668.1;Parent=gene-NM058_02590;Dbxref=NCBI_GP:UTX05668.1;Name=UTX05668.1;Ontology_term=GO:0019835;gbkey=CDS;gene=sboA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391616.1;locus_tag=NM058_02590;product=subtilosin A;protein_id=UTX05668.1;transl_table=11 CP101611.1 Genbank gene 495372 495797 . + . ID=gene-NM058_02595;Name=NM058_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02595 CP101611.1 Protein Homology CDS 495372 495797 . + 0 ID=cds-UTX05669.1;Parent=gene-NM058_02595;Dbxref=NCBI_GP:UTX05669.1;Name=UTX05669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391615.1;locus_tag=NM058_02595;product=DUF1934 domain-containing protein;protein_id=UTX05669.1;transl_table=11 CP101611.1 Genbank gene 495794 497464 . + . ID=gene-NM058_02600;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=NM058_02600 CP101611.1 Protein Homology CDS 495794 497464 . + 0 ID=cds-UTX05670.1;Parent=gene-NM058_02600;Dbxref=NCBI_GP:UTX05670.1;Name=UTX05670.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391614.1;locus_tag=NM058_02600;product=arginine--tRNA ligase;protein_id=UTX05670.1;transl_table=11 CP101611.1 Genbank pseudogene 497598 498784 . + . ID=gene-NM058_02605;Name=narK;gbkey=Gene;gene=narK;gene_biotype=pseudogene;locus_tag=NM058_02605;pseudo=true CP101611.1 Protein Homology CDS 497598 498784 . + 0 ID=cds-NM058_02605;Parent=gene-NM058_02605;Note=frameshifted;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391613.2;locus_tag=NM058_02605;product=nitrate transporter NarK;pseudo=true;transl_table=11 CP101611.1 Genbank gene 498884 499600 . + . ID=gene-NM058_02610;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=NM058_02610 CP101611.1 Protein Homology CDS 498884 499600 . + 0 ID=cds-UTX05671.1;Parent=gene-NM058_02610;Dbxref=NCBI_GP:UTX05671.1;Name=UTX05671.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391612.1;locus_tag=NM058_02610;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=UTX05671.1;transl_table=11 CP101611.1 Genbank gene 499634 500353 . - . ID=gene-NM058_02615;Name=NM058_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02615 CP101611.1 Protein Homology CDS 499634 500353 . - 0 ID=cds-UTX05672.1;Parent=gene-NM058_02615;Dbxref=NCBI_GP:UTX05672.1;Name=UTX05672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391611.1;locus_tag=NM058_02615;product=YwiC-like family protein;protein_id=UTX05672.1;transl_table=11 CP101611.1 Genbank gene 500497 500973 . + . ID=gene-NM058_02620;Name=arfM;gbkey=Gene;gene=arfM;gene_biotype=protein_coding;locus_tag=NM058_02620 CP101611.1 Protein Homology CDS 500497 500973 . + 0 ID=cds-UTX05673.1;Parent=gene-NM058_02620;Dbxref=NCBI_GP:UTX05673.1;Name=UTX05673.1;gbkey=CDS;gene=arfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391610.1;locus_tag=NM058_02620;product=Crp/Fnr family transcriptional regulator ArfM;protein_id=UTX05673.1;transl_table=11 CP101611.1 Genbank gene 501191 504877 . + . ID=gene-NM058_02625;Name=NM058_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02625 CP101611.1 Protein Homology CDS 501191 504877 . + 0 ID=cds-UTX05674.1;Parent=gene-NM058_02625;Dbxref=NCBI_GP:UTX05674.1;Name=UTX05674.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391609.2;locus_tag=NM058_02625;product=nitrate reductase subunit alpha;protein_id=UTX05674.1;transl_table=11 CP101611.1 Genbank gene 504867 506327 . + . ID=gene-NM058_02630;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=NM058_02630 CP101611.1 Protein Homology CDS 504867 506327 . + 0 ID=cds-UTX05675.1;Parent=gene-NM058_02630;Dbxref=NCBI_GP:UTX05675.1;Name=UTX05675.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391608.1;locus_tag=NM058_02630;product=nitrate reductase subunit beta;protein_id=UTX05675.1;transl_table=11 CP101611.1 Genbank pseudogene 506354 506907 . + . ID=gene-NM058_02635;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=pseudogene;locus_tag=NM058_02635;pseudo=true CP101611.1 Protein Homology CDS 506354 506907 . + 0 ID=cds-NM058_02635;Parent=gene-NM058_02635;Note=frameshifted;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391607.1;locus_tag=NM058_02635;product=nitrate reductase molybdenum cofactor assembly chaperone;pseudo=true;transl_table=11 CP101611.1 Genbank gene 506904 507575 . + . ID=gene-NM058_02640;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=NM058_02640 CP101611.1 Protein Homology CDS 506904 507575 . + 0 ID=cds-UTX05676.1;Parent=gene-NM058_02640;Dbxref=NCBI_GP:UTX05676.1;Name=UTX05676.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391606.1;locus_tag=NM058_02640;product=respiratory nitrate reductase subunit gamma;protein_id=UTX05676.1;transl_table=11 CP101611.1 Genbank gene 507719 508348 . + . ID=gene-NM058_02645;Name=NM058_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02645 CP101611.1 Protein Homology CDS 507719 508348 . + 0 ID=cds-UTX05677.1;Parent=gene-NM058_02645;Dbxref=NCBI_GP:UTX05677.1;Name=UTX05677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007614404.1;locus_tag=NM058_02645;product=YitT family protein;protein_id=UTX05677.1;transl_table=11 CP101611.1 Genbank pseudogene 508451 509951 . + . ID=gene-NM058_02650;Name=cls;gbkey=Gene;gene=cls;gene_biotype=pseudogene;locus_tag=NM058_02650;pseudo=true CP101611.1 Protein Homology CDS 508451 509951 . + 0 ID=cds-NM058_02650;Parent=gene-NM058_02650;Note=frameshifted;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391605.1;locus_tag=NM058_02650;product=cardiolipin synthase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 510040 511767 . + . ID=gene-NM058_02655;Name=NM058_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02655 CP101611.1 Protein Homology CDS 510040 511767 . + 0 ID=cds-UTX05678.1;Parent=gene-NM058_02655;Dbxref=NCBI_GP:UTX05678.1;Name=UTX05678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391604.1;locus_tag=NM058_02655;product=ABC transporter ATP-binding protein/permease;protein_id=UTX05678.1;transl_table=11 CP101611.1 Genbank gene 511821 512300 . + . ID=gene-NM058_02660;Name=NM058_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02660 CP101611.1 Protein Homology CDS 511821 512300 . + 0 ID=cds-UTX06952.1;Parent=gene-NM058_02660;Dbxref=NCBI_GP:UTX06952.1;Name=UTX06952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014115531.1;locus_tag=NM058_02660;product=dihydrofolate reductase family protein;protein_id=UTX06952.1;transl_table=11 CP101611.1 Genbank gene 512342 512614 . - . ID=gene-NM058_02665;Name=NM058_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02665 CP101611.1 Protein Homology CDS 512342 512614 . - 0 ID=cds-UTX05679.1;Parent=gene-NM058_02665;Dbxref=NCBI_GP:UTX05679.1;Name=UTX05679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391602.1;locus_tag=NM058_02665;product=hypothetical protein;protein_id=UTX05679.1;transl_table=11 CP101611.1 Genbank gene 512695 513657 . - . ID=gene-NM058_02670;Name=uvsE;gbkey=Gene;gene=uvsE;gene_biotype=protein_coding;locus_tag=NM058_02670 CP101611.1 Protein Homology CDS 512695 513657 . - 0 ID=cds-UTX05680.1;Parent=gene-NM058_02670;Dbxref=NCBI_GP:UTX05680.1;Name=UTX05680.1;Ontology_term=GO:0006281,GO:0009650,GO:0004518;gbkey=CDS;gene=uvsE;go_function=nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA,UV protection|0009650||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391601.1;locus_tag=NM058_02670;product=UV DNA damage repair endonuclease UvsE;protein_id=UTX05680.1;transl_table=11 CP101611.1 Genbank gene 513670 514869 . - . ID=gene-NM058_02675;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=NM058_02675 CP101611.1 Protein Homology CDS 513670 514869 . - 0 ID=cds-UTX05681.1;Parent=gene-NM058_02675;Dbxref=NCBI_GP:UTX05681.1;Name=UTX05681.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391600.1;locus_tag=NM058_02675;product=cardiolipin synthase;protein_id=UTX05681.1;transl_table=11 CP101611.1 Genbank gene 515024 517141 . + . ID=gene-NM058_02680;Name=NM058_02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02680 CP101611.1 Protein Homology CDS 515024 517141 . + 0 ID=cds-UTX05682.1;Parent=gene-NM058_02680;Dbxref=NCBI_GP:UTX05682.1;Name=UTX05682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259745.1;locus_tag=NM058_02680;product=heterodisulfide reductase-related iron-sulfur binding cluster;protein_id=UTX05682.1;transl_table=11 CP101611.1 Genbank gene 517138 518277 . + . ID=gene-NM058_02685;Name=acdA;gbkey=Gene;gene=acdA;gene_biotype=protein_coding;locus_tag=NM058_02685 CP101611.1 Protein Homology CDS 517138 518277 . + 0 ID=cds-UTX05683.1;Parent=gene-NM058_02685;Dbxref=NCBI_GP:UTX05683.1;Name=UTX05683.1;gbkey=CDS;gene=acdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391598.1;locus_tag=NM058_02685;product=acyl-CoA dehydrogenase AcdA;protein_id=UTX05683.1;transl_table=11 CP101611.1 Genbank gene 518460 518981 . + . ID=gene-NM058_02690;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=NM058_02690 CP101611.1 Protein Homology CDS 518460 518981 . + 0 ID=cds-UTX05684.1;Parent=gene-NM058_02690;Dbxref=NCBI_GP:UTX05684.1;Name=UTX05684.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391597.1;locus_tag=NM058_02690;product=DNA-directed RNA polymerase subunit delta;protein_id=UTX05684.1;transl_table=11 CP101611.1 Genbank pseudogene 519223 520829 . + . ID=gene-NM058_02695;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=pseudogene;locus_tag=NM058_02695;pseudo=true CP101611.1 Protein Homology CDS 519223 520829 . + 0 ID=cds-NM058_02695;Parent=gene-NM058_02695;Note=frameshifted;Ontology_term=GO:0009220,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391596.1;locus_tag=NM058_02695;product=CTP synthase (glutamine hydrolyzing);pseudo=true;transl_table=11 CP101611.1 Genbank gene 520912 521433 . - . ID=gene-NM058_02700;Name=NM058_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02700 CP101611.1 Protein Homology CDS 520912 521433 . - 0 ID=cds-UTX05685.1;Parent=gene-NM058_02700;Dbxref=NCBI_GP:UTX05685.1;Name=UTX05685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391595.1;locus_tag=NM058_02700;product=DUF2529 domain-containing protein;protein_id=UTX05685.1;transl_table=11 CP101611.1 Genbank pseudogene 521599 521972 . + . ID=gene-NM058_02705;Name=spo0F;gbkey=Gene;gene=spo0F;gene_biotype=pseudogene;locus_tag=NM058_02705;pseudo=true CP101611.1 Protein Homology CDS 521599 521972 . + 0 ID=cds-NM058_02705;Parent=gene-NM058_02705;Note=frameshifted;gbkey=CDS;gene=spo0F;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391594.1;locus_tag=NM058_02705;product=sporulation initiation phosphotransferase Spo0F;pseudo=true;transl_table=11 CP101611.1 Genbank gene 522152 523009 . + . ID=gene-NM058_02710;Name=NM058_02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02710 CP101611.1 Protein Homology CDS 522152 523009 . + 0 ID=cds-UTX05686.1;Parent=gene-NM058_02710;Dbxref=NCBI_GP:UTX05686.1;Name=UTX05686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391593.1;locus_tag=NM058_02710;product=fructose-bisphosphate aldolase;protein_id=UTX05686.1;transl_table=11 CP101611.1 Genbank gene 523128 523766 . + . ID=gene-NM058_02715;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=NM058_02715 CP101611.1 Protein Homology CDS 523128 523766 . + 0 ID=cds-UTX05687.1;Parent=gene-NM058_02715;Dbxref=NCBI_GP:UTX05687.1;Name=UTX05687.1;Ontology_term=GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391592.3;locus_tag=NM058_02715;product=fructose-6-phosphate aldolase;protein_id=UTX05687.1;transl_table=11 CP101611.1 Genbank gene 524145 525434 . + . ID=gene-NM058_02720;Name=NM058_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02720 CP101611.1 Protein Homology CDS 524145 525434 . + 0 ID=cds-UTX05688.1;Parent=gene-NM058_02720;Dbxref=NCBI_GP:UTX05688.1;Name=UTX05688.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391591.2;locus_tag=NM058_02720;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=UTX05688.1;transl_table=11 CP101611.1 Genbank gene 525465 525584 . + . ID=gene-NM058_02725;Name=NM058_02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02725 CP101611.1 GeneMarkS-2+ CDS 525465 525584 . + 0 ID=cds-UTX07129.1;Parent=gene-NM058_02725;Dbxref=NCBI_GP:UTX07129.1;Name=UTX07129.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_02725;product=fructose-bisphosphatase class II;protein_id=UTX07129.1;transl_table=11 CP101611.1 Genbank gene 525530 526429 . + . ID=gene-NM058_02730;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=NM058_02730 CP101611.1 Protein Homology CDS 525530 526429 . + 0 ID=cds-UTX05689.1;Parent=gene-NM058_02730;Dbxref=NCBI_GP:UTX05689.1;Name=UTX05689.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: protein motif:HMM:NF015290.2;locus_tag=NM058_02730;product=class II fructose-bisphosphatase;protein_id=UTX05689.1;transl_table=11 CP101611.1 Genbank gene 526642 526812 . + . ID=gene-NM058_02735;Name=NM058_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02735 CP101611.1 Protein Homology CDS 526642 526812 . + 0 ID=cds-UTX05690.1;Parent=gene-NM058_02735;Dbxref=NCBI_GP:UTX05690.1;Name=UTX05690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009514010.1;locus_tag=NM058_02735;product=hypothetical protein;protein_id=UTX05690.1;transl_table=11 CP101611.1 Genbank pseudogene 526835 528115 . + . ID=gene-NM058_02740;Name=rho;gbkey=Gene;gene=rho;gene_biotype=pseudogene;locus_tag=NM058_02740;pseudo=true CP101611.1 Protein Homology CDS 526835 528115 . + 0 ID=cds-NM058_02740;Parent=gene-NM058_02740;Note=frameshifted;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription%2C termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391589.2;locus_tag=NM058_02740;product=transcription termination factor Rho;pseudo=true;transl_table=11 CP101611.1 Genbank gene 528234 528434 . + . ID=gene-NM058_02745;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=NM058_02745 CP101611.1 Protein Homology CDS 528234 528434 . + 0 ID=cds-UTX05691.1;Parent=gene-NM058_02745;Dbxref=NCBI_GP:UTX05691.1;Name=UTX05691.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003151132.1;locus_tag=NM058_02745;product=50S ribosomal protein L31;protein_id=UTX05691.1;transl_table=11 CP101611.1 Genbank gene 528523 529110 . + . ID=gene-NM058_02750;Name=NM058_02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02750 CP101611.1 Protein Homology CDS 528523 529110 . + 0 ID=cds-UTX05692.1;Parent=gene-NM058_02750;Dbxref=NCBI_GP:UTX05692.1;Name=UTX05692.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010332252.1;locus_tag=NM058_02750;product=thymidine kinase;protein_id=UTX05692.1;transl_table=11 CP101611.1 Genbank gene 529400 531097 . + . ID=gene-NM058_02755;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=NM058_02755 CP101611.1 Protein Homology CDS 529400 531097 . + 0 ID=cds-UTX05693.1;Parent=gene-NM058_02755;Dbxref=NCBI_GP:UTX05693.1;Name=UTX05693.1;gbkey=CDS;gene=malS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003244309.1;locus_tag=NM058_02755;product=oxaloacetate-decarboxylating malate dehydrogenase;protein_id=UTX05693.1;transl_table=11 CP101611.1 Genbank gene 531179 532138 . + . ID=gene-NM058_02760;Name=NM058_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02760 CP101611.1 Protein Homology CDS 531179 532138 . + 0 ID=cds-UTX05694.1;Parent=gene-NM058_02760;Dbxref=NCBI_GP:UTX05694.1;Name=UTX05694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391585.1;locus_tag=NM058_02760;product=AEC family transporter;protein_id=UTX05694.1;transl_table=11 CP101611.1 Genbank gene 532174 532728 . - . ID=gene-NM058_02765;Name=racA;gbkey=Gene;gene=racA;gene_biotype=protein_coding;locus_tag=NM058_02765 CP101611.1 Protein Homology CDS 532174 532728 . - 0 ID=cds-UTX05695.1;Parent=gene-NM058_02765;Dbxref=NCBI_GP:UTX05695.1;Name=UTX05695.1;gbkey=CDS;gene=racA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391584.1;locus_tag=NM058_02765;product=chromosome-anchoring protein RacA;protein_id=UTX05695.1;transl_table=11 CP101611.1 Genbank gene 532849 533235 . - . ID=gene-NM058_02770;Name=NM058_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02770 CP101611.1 Protein Homology CDS 532849 533235 . - 0 ID=cds-UTX06953.1;Parent=gene-NM058_02770;Dbxref=NCBI_GP:UTX06953.1;Name=UTX06953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391583.1;locus_tag=NM058_02770;product=VOC family protein;protein_id=UTX06953.1;transl_table=11 CP101611.1 Genbank gene 533361 534431 . + . ID=gene-NM058_02775;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=NM058_02775 CP101611.1 Protein Homology CDS 533361 534431 . + 0 ID=cds-UTX06954.1;Parent=gene-NM058_02775;Dbxref=NCBI_GP:UTX06954.1;Name=UTX06954.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391582.1;locus_tag=NM058_02775;product=peptide chain release factor 1;protein_id=UTX06954.1;transl_table=11 CP101611.1 Genbank gene 534433 535299 . + . ID=gene-NM058_02780;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=NM058_02780 CP101611.1 Protein Homology CDS 534433 535299 . + 0 ID=cds-UTX05696.1;Parent=gene-NM058_02780;Dbxref=NCBI_GP:UTX05696.1;Name=UTX05696.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391581.1;locus_tag=NM058_02780;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=UTX05696.1;transl_table=11 CP101611.1 Genbank gene 535361 535648 . + . ID=gene-NM058_02785;Name=NM058_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02785 CP101611.1 Protein Homology CDS 535361 535648 . + 0 ID=cds-UTX05697.1;Parent=gene-NM058_02785;Dbxref=NCBI_GP:UTX05697.1;Name=UTX05697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391580.1;locus_tag=NM058_02785;product=DUF5316 domain-containing protein;protein_id=UTX05697.1;transl_table=11 CP101611.1 Genbank gene 535665 536027 . - . ID=gene-NM058_02790;Name=NM058_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02790 CP101611.1 Protein Homology CDS 535665 536027 . - 0 ID=cds-UTX05698.1;Parent=gene-NM058_02790;Dbxref=NCBI_GP:UTX05698.1;Name=UTX05698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391579.1;locus_tag=NM058_02790;product=UPF0715 family protein;protein_id=UTX05698.1;transl_table=11 CP101611.1 Genbank gene 536169 536843 . + . ID=gene-NM058_02795;Name=spoIIR;gbkey=Gene;gene=spoIIR;gene_biotype=protein_coding;locus_tag=NM058_02795 CP101611.1 Protein Homology CDS 536169 536843 . + 0 ID=cds-UTX05699.1;Parent=gene-NM058_02795;Dbxref=NCBI_GP:UTX05699.1;Name=UTX05699.1;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=spoIIR;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391578.1;locus_tag=NM058_02795;product=stage II sporulation protein R;protein_id=UTX05699.1;transl_table=11 CP101611.1 Genbank gene 536910 537359 . + . ID=gene-NM058_02800;Name=NM058_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02800 CP101611.1 Protein Homology CDS 536910 537359 . + 0 ID=cds-UTX06955.1;Parent=gene-NM058_02800;Dbxref=NCBI_GP:UTX06955.1;Name=UTX06955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259734.1;locus_tag=NM058_02800;product=hypothetical protein;protein_id=UTX06955.1;transl_table=11 CP101611.1 Genbank gene 537510 538550 . + . ID=gene-NM058_02805;Name=NM058_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02805 CP101611.1 Protein Homology CDS 537510 538550 . + 0 ID=cds-UTX05700.1;Parent=gene-NM058_02805;Dbxref=NCBI_GP:UTX05700.1;Name=UTX05700.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391576.1;locus_tag=NM058_02805;product=L-threonylcarbamoyladenylate synthase;protein_id=UTX05700.1;transl_table=11 CP101611.1 Genbank gene 538629 539186 . + . ID=gene-NM058_02810;Name=NM058_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02810 CP101611.1 Protein Homology CDS 538629 539186 . + 0 ID=cds-UTX05701.1;Parent=gene-NM058_02810;Dbxref=NCBI_GP:UTX05701.1;Name=UTX05701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391575.1;locus_tag=NM058_02810;product=manganese efflux pump MntP family protein;protein_id=UTX05701.1;transl_table=11 CP101611.1 Genbank gene 539262 539714 . + . ID=gene-NM058_02815;Name=NM058_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02815 CP101611.1 Protein Homology CDS 539262 539714 . + 0 ID=cds-UTX05702.1;Parent=gene-NM058_02815;Dbxref=NCBI_GP:UTX05702.1;Name=UTX05702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391574.1;locus_tag=NM058_02815;product=low molecular weight protein arginine phosphatase;protein_id=UTX05702.1;transl_table=11 CP101611.1 Genbank gene 539872 540321 . + . ID=gene-NM058_02820;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=NM058_02820 CP101611.1 Protein Homology CDS 539872 540321 . + 0 ID=cds-UTX06956.1;Parent=gene-NM058_02820;Dbxref=NCBI_GP:UTX06956.1;Name=UTX06956.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiB;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391573.1;locus_tag=NM058_02820;product=ribose 5-phosphate isomerase B;protein_id=UTX06956.1;transl_table=11 CP101611.1 Genbank gene 540334 540876 . + . ID=gene-NM058_02825;Name=NM058_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02825 CP101611.1 Protein Homology CDS 540334 540876 . + 0 ID=cds-UTX05703.1;Parent=gene-NM058_02825;Dbxref=NCBI_GP:UTX05703.1;Name=UTX05703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391572.1;locus_tag=NM058_02825;product=TIGR01440 family protein;protein_id=UTX05703.1;transl_table=11 CP101611.1 Genbank gene 541084 542331 . + . ID=gene-NM058_02830;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=NM058_02830 CP101611.1 Protein Homology CDS 541084 542331 . + 0 ID=cds-UTX05704.1;Parent=gene-NM058_02830;Dbxref=NCBI_GP:UTX05704.1;Name=UTX05704.1;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391571.1;locus_tag=NM058_02830;product=serine hydroxymethyltransferase;protein_id=UTX05704.1;transl_table=11 CP101611.1 Genbank gene 542466 543095 . + . ID=gene-NM058_02835;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=NM058_02835 CP101611.1 Protein Homology CDS 542466 543095 . + 0 ID=cds-UTX05705.1;Parent=gene-NM058_02835;Dbxref=NCBI_GP:UTX05705.1;Name=UTX05705.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391570.1;locus_tag=NM058_02835;product=uracil phosphoribosyltransferase;protein_id=UTX05705.1;transl_table=11 CP101611.1 Genbank gene 543515 543898 . + . ID=gene-NM058_02840;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=NM058_02840 CP101611.1 Protein Homology CDS 543515 543898 . + 0 ID=cds-UTX05706.1;Parent=gene-NM058_02840;Dbxref=NCBI_GP:UTX05706.1;Name=UTX05706.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391569.1;locus_tag=NM058_02840;product=ATP synthase subunit I;protein_id=UTX05706.1;transl_table=11 CP101611.1 Genbank gene 543906 544640 . + . ID=gene-NM058_02845;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=NM058_02845 CP101611.1 Protein Homology CDS 543906 544640 . + 0 ID=cds-UTX05707.1;Parent=gene-NM058_02845;Dbxref=NCBI_GP:UTX05707.1;Name=UTX05707.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpB;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391568.1;locus_tag=NM058_02845;product=F0F1 ATP synthase subunit A;protein_id=UTX05707.1;transl_table=11 CP101611.1 Genbank gene 544686 544898 . + . ID=gene-NM058_02850;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=NM058_02850 CP101611.1 Protein Homology CDS 544686 544898 . + 0 ID=cds-UTX05708.1;Parent=gene-NM058_02850;Dbxref=NCBI_GP:UTX05708.1;Name=UTX05708.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391567.1;locus_tag=NM058_02850;product=F0F1 ATP synthase subunit C;protein_id=UTX05708.1;transl_table=11 CP101611.1 Genbank pseudogene 545061 545571 . + . ID=gene-NM058_02855;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=pseudogene;locus_tag=NM058_02855;pseudo=true CP101611.1 Protein Homology CDS 545061 545571 . + 0 ID=cds-NM058_02855;Parent=gene-NM058_02855;Note=frameshifted;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpF;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391566.1;locus_tag=NM058_02855;product=F0F1 ATP synthase subunit B;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 545568 546111 . + . ID=gene-NM058_02860;Name=NM058_02860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02860;pseudo=true CP101611.1 Protein Homology CDS 545568 546111 . + 0 ID=cds-NM058_02860;Parent=gene-NM058_02860;Note=frameshifted;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391565.1;locus_tag=NM058_02860;product=F0F1 ATP synthase subunit delta;pseudo=true;transl_table=11 CP101611.1 Genbank gene 546128 547636 . + . ID=gene-NM058_02865;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=NM058_02865 CP101611.1 Protein Homology CDS 546128 547636 . + 0 ID=cds-UTX05709.1;Parent=gene-NM058_02865;Dbxref=NCBI_GP:UTX05709.1;Name=UTX05709.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391564.1;locus_tag=NM058_02865;product=F0F1 ATP synthase subunit alpha;protein_id=UTX05709.1;transl_table=11 CP101611.1 Genbank gene 547709 548572 . + . ID=gene-NM058_02870;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=NM058_02870 CP101611.1 Protein Homology CDS 547709 548572 . + 0 ID=cds-UTX05710.1;Parent=gene-NM058_02870;Dbxref=NCBI_GP:UTX05710.1;Name=UTX05710.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpG;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391563.1;locus_tag=NM058_02870;product=ATP synthase F1 subunit gamma;protein_id=UTX05710.1;transl_table=11 CP101611.1 Genbank gene 548598 550019 . + . ID=gene-NM058_02875;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=NM058_02875 CP101611.1 Protein Homology CDS 548598 550019 . + 0 ID=cds-UTX05711.1;Parent=gene-NM058_02875;Dbxref=NCBI_GP:UTX05711.1;Name=UTX05711.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391562.1;locus_tag=NM058_02875;product=F0F1 ATP synthase subunit beta;protein_id=UTX05711.1;transl_table=11 CP101611.1 Genbank gene 550043 550441 . + . ID=gene-NM058_02880;Name=NM058_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02880 CP101611.1 Protein Homology CDS 550043 550441 . + 0 ID=cds-UTX05712.1;Parent=gene-NM058_02880;Dbxref=NCBI_GP:UTX05712.1;Name=UTX05712.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391561.1;locus_tag=NM058_02880;product=F0F1 ATP synthase subunit epsilon;protein_id=UTX05712.1;transl_table=11 CP101611.1 Genbank pseudogene 550475 550947 . - . ID=gene-NM058_02885;Name=NM058_02885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02885;pseudo=true CP101611.1 Protein Homology CDS 550475 550947 . - 0 ID=cds-NM058_02885;Parent=gene-NM058_02885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391560.1;locus_tag=NM058_02885;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 551125 551355 . + . ID=gene-NM058_02890;Name=NM058_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02890 CP101611.1 Protein Homology CDS 551125 551355 . + 0 ID=cds-UTX05713.1;Parent=gene-NM058_02890;Dbxref=NCBI_GP:UTX05713.1;Name=UTX05713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391559.1;locus_tag=NM058_02890;product=DUF1146 family protein;protein_id=UTX05713.1;transl_table=11 CP101611.1 Genbank gene 551490 552230 . + . ID=gene-NM058_02895;Name=NM058_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02895 CP101611.1 Protein Homology CDS 551490 552230 . + 0 ID=cds-UTX05714.1;Parent=gene-NM058_02895;Dbxref=NCBI_GP:UTX05714.1;Name=UTX05714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391558.1;locus_tag=NM058_02895;product=YwmB family TATA-box binding protein;protein_id=UTX05714.1;transl_table=11 CP101611.1 Genbank gene 552264 553574 . + . ID=gene-NM058_02900;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=NM058_02900 CP101611.1 Protein Homology CDS 552264 553574 . + 0 ID=cds-UTX05715.1;Parent=gene-NM058_02900;Dbxref=NCBI_GP:UTX05715.1;Name=UTX05715.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391557.1;locus_tag=NM058_02900;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=UTX05715.1;transl_table=11 CP101611.1 Genbank gene 553774 554805 . + . ID=gene-NM058_02905;Name=spoIID;gbkey=Gene;gene=spoIID;gene_biotype=protein_coding;locus_tag=NM058_02905 CP101611.1 Protein Homology CDS 553774 554805 . + 0 ID=cds-UTX05716.1;Parent=gene-NM058_02905;Dbxref=NCBI_GP:UTX05716.1;Name=UTX05716.1;Ontology_term=GO:0030436;gbkey=CDS;gene=spoIID;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391556.1;locus_tag=NM058_02905;product=stage II sporulation protein D;protein_id=UTX05716.1;transl_table=11 CP101611.1 Genbank gene 555201 555884 . + . ID=gene-NM058_02910;Name=NM058_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02910 CP101611.1 Protein Homology CDS 555201 555884 . + 0 ID=cds-UTX05717.1;Parent=gene-NM058_02910;Dbxref=NCBI_GP:UTX05717.1;Name=UTX05717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391555.1;locus_tag=NM058_02910;product=VWA domain-containing protein;protein_id=UTX05717.1;transl_table=11 CP101611.1 Genbank gene 556204 556878 . + . ID=gene-NM058_02915;Name=NM058_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02915 CP101611.1 Protein Homology CDS 556204 556878 . + 0 ID=cds-UTX05718.1;Parent=gene-NM058_02915;Dbxref=NCBI_GP:UTX05718.1;Name=UTX05718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391554.1;locus_tag=NM058_02915;product=VWA domain-containing protein;protein_id=UTX05718.1;transl_table=11 CP101611.1 Genbank gene 556971 557132 . + . ID=gene-NM058_02920;Name=NM058_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02920 CP101611.1 Protein Homology CDS 556971 557132 . + 0 ID=cds-UTX05719.1;Parent=gene-NM058_02920;Dbxref=NCBI_GP:UTX05719.1;Name=UTX05719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391553.1;locus_tag=NM058_02920;product=hypothetical protein;protein_id=UTX05719.1;transl_table=11 CP101611.1 Genbank gene 557235 558023 . + . ID=gene-NM058_02925;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=NM058_02925 CP101611.1 Protein Homology CDS 557235 558023 . + 0 ID=cds-UTX05720.1;Parent=gene-NM058_02925;Dbxref=NCBI_GP:UTX05720.1;Name=UTX05720.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003221865.1;locus_tag=NM058_02925;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=UTX05720.1;transl_table=11 CP101611.1 Genbank gene 558039 559064 . + . ID=gene-NM058_02930;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=NM058_02930 CP101611.1 Protein Homology CDS 558039 559064 . + 0 ID=cds-UTX05721.1;Parent=gene-NM058_02930;Dbxref=NCBI_GP:UTX05721.1;Name=UTX05721.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391551.1;locus_tag=NM058_02930;product=GTP 3'%2C8-cyclase MoaA;protein_id=UTX05721.1;transl_table=11 CP101611.1 Genbank gene 559260 560393 . + . ID=gene-NM058_02935;Name=rapB;gbkey=Gene;gene=rapB;gene_biotype=protein_coding;locus_tag=NM058_02935 CP101611.1 Protein Homology CDS 559260 560393 . + 0 ID=cds-UTX05722.1;Parent=gene-NM058_02935;Dbxref=NCBI_GP:UTX05722.1;Name=UTX05722.1;gbkey=CDS;gene=rapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391550.1;locus_tag=NM058_02935;product=response regulator aspartate phosphatase RapB;protein_id=UTX05722.1;transl_table=11 CP101611.1 Genbank pseudogene 560568 561046 . + . ID=gene-NM058_02940;Name=NM058_02940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_02940;pseudo=true CP101611.1 Protein Homology CDS 560568 561046 . + 0 ID=cds-NM058_02940;Parent=gene-NM058_02940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003235739.1;locus_tag=NM058_02940;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 561118 561306 . + . ID=gene-NM058_02945;Name=NM058_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02945 CP101611.1 Protein Homology CDS 561118 561306 . + 0 ID=cds-UTX05723.1;Parent=gene-NM058_02945;Dbxref=NCBI_GP:UTX05723.1;Name=UTX05723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391548.1;locus_tag=NM058_02945;product=CsbD family protein;protein_id=UTX05723.1;transl_table=11 CP101611.1 Genbank gene 561512 562768 . + . ID=gene-NM058_02950;Name=urtA;gbkey=Gene;gene=urtA;gene_biotype=protein_coding;locus_tag=NM058_02950 CP101611.1 Protein Homology CDS 561512 562768 . + 0 ID=cds-UTX05724.1;Parent=gene-NM058_02950;Dbxref=NCBI_GP:UTX05724.1;Name=UTX05724.1;Ontology_term=GO:0015840,GO:0033219,GO:0033221,GO:0030288,GO:0055052;gbkey=CDS;gene=urtA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=urea binding|0033219||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019716013.1;locus_tag=NM058_02950;product=urea ABC transporter substrate-binding protein;protein_id=UTX05724.1;transl_table=11 CP101611.1 Genbank gene 562801 563703 . + . ID=gene-NM058_02955;Name=urtB;gbkey=Gene;gene=urtB;gene_biotype=protein_coding;locus_tag=NM058_02955 CP101611.1 Protein Homology CDS 562801 563703 . + 0 ID=cds-UTX05725.1;Parent=gene-NM058_02955;Dbxref=NCBI_GP:UTX05725.1;Name=UTX05725.1;Ontology_term=GO:0015840,GO:0033221,GO:0005887,GO:0055052;gbkey=CDS;gene=urtB;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259718.1;locus_tag=NM058_02955;product=urea ABC transporter permease subunit UrtB;protein_id=UTX05725.1;transl_table=11 CP101611.1 Genbank gene 563715 564785 . + . ID=gene-NM058_02960;Name=urtC;gbkey=Gene;gene=urtC;gene_biotype=protein_coding;locus_tag=NM058_02960 CP101611.1 Protein Homology CDS 563715 564785 . + 0 ID=cds-UTX05726.1;Parent=gene-NM058_02960;Dbxref=NCBI_GP:UTX05726.1;Name=UTX05726.1;Ontology_term=GO:0015840,GO:0033221,GO:0005887,GO:0055052;gbkey=CDS;gene=urtC;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003221854.1;locus_tag=NM058_02960;product=urea ABC transporter permease subunit UrtC;protein_id=UTX05726.1;transl_table=11 CP101611.1 Genbank gene 564760 565509 . + . ID=gene-NM058_02965;Name=urtD;gbkey=Gene;gene=urtD;gene_biotype=protein_coding;locus_tag=NM058_02965 CP101611.1 Protein Homology CDS 564760 565509 . + 0 ID=cds-UTX05727.1;Parent=gene-NM058_02965;Dbxref=NCBI_GP:UTX05727.1;Name=UTX05727.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtD;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014115481.1;locus_tag=NM058_02965;product=urea ABC transporter ATP-binding protein UrtD;protein_id=UTX05727.1;transl_table=11 CP101611.1 Genbank gene 565506 566204 . + . ID=gene-NM058_02970;Name=urtE;gbkey=Gene;gene=urtE;gene_biotype=protein_coding;locus_tag=NM058_02970 CP101611.1 Protein Homology CDS 565506 566204 . + 0 ID=cds-UTX05728.1;Parent=gene-NM058_02970;Dbxref=NCBI_GP:UTX05728.1;Name=UTX05728.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014115480.1;locus_tag=NM058_02970;product=urea ABC transporter ATP-binding subunit UrtE;protein_id=UTX05728.1;transl_table=11 CP101611.1 Genbank gene 566304 566621 . + . ID=gene-NM058_02975;Name=ureA;gbkey=Gene;gene=ureA;gene_biotype=protein_coding;locus_tag=NM058_02975 CP101611.1 Protein Homology CDS 566304 566621 . + 0 ID=cds-UTX05729.1;Parent=gene-NM058_02975;Dbxref=NCBI_GP:UTX05729.1;Name=UTX05729.1;Ontology_term=GO:0019627,GO:0009039;gbkey=CDS;gene=ureA;go_function=urease activity|0009039||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391547.1;locus_tag=NM058_02975;product=urease subunit gamma;protein_id=UTX05729.1;transl_table=11 CP101611.1 Genbank gene 566618 566992 . + . ID=gene-NM058_02980;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=NM058_02980 CP101611.1 Protein Homology CDS 566618 566992 . + 0 ID=cds-UTX05730.1;Parent=gene-NM058_02980;Dbxref=NCBI_GP:UTX05730.1;Name=UTX05730.1;Ontology_term=GO:0043419,GO:0009039,GO:0035550;gbkey=CDS;gene=ureB;go_component=urease complex|0035550||IEA;go_function=urease activity|0009039||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391546.1;locus_tag=NM058_02980;product=urease subunit beta;protein_id=UTX05730.1;transl_table=11 CP101611.1 Genbank gene 566989 568698 . + . ID=gene-NM058_02985;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=NM058_02985 CP101611.1 Protein Homology CDS 566989 568698 . + 0 ID=cds-UTX05731.1;Parent=gene-NM058_02985;Dbxref=NCBI_GP:UTX05731.1;Name=UTX05731.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391545.1;locus_tag=NM058_02985;product=urease subunit alpha;protein_id=UTX05731.1;transl_table=11 CP101611.1 Genbank gene 568832 569233 . + . ID=gene-NM058_02990;Name=NM058_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02990 CP101611.1 Protein Homology CDS 568832 569233 . + 0 ID=cds-UTX05732.1;Parent=gene-NM058_02990;Dbxref=NCBI_GP:UTX05732.1;Name=UTX05732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391544.1;locus_tag=NM058_02990;product=Rrf2 family transcriptional regulator;protein_id=UTX05732.1;transl_table=11 CP101611.1 Genbank gene 569301 569942 . + . ID=gene-NM058_02995;Name=NM058_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_02995 CP101611.1 Protein Homology CDS 569301 569942 . + 0 ID=cds-UTX05733.1;Parent=gene-NM058_02995;Dbxref=NCBI_GP:UTX05733.1;Name=UTX05733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391543.1;locus_tag=NM058_02995;product=NAD(P)-dependent oxidoreductase;protein_id=UTX05733.1;transl_table=11 CP101611.1 Genbank pseudogene 569978 570363 . - . ID=gene-NM058_03000;Name=NM058_03000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03000;pseudo=true CP101611.1 Protein Homology CDS 569978 570363 . - 0 ID=cds-NM058_03000;Parent=gene-NM058_03000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003221845.1;locus_tag=NM058_03000;product=DUF5362 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 570509 571282 . + . ID=gene-NM058_03005;Name=NM058_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03005 CP101611.1 Protein Homology CDS 570509 571282 . + 0 ID=cds-UTX05734.1;Parent=gene-NM058_03005;Dbxref=NCBI_GP:UTX05734.1;Name=UTX05734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391541.1;locus_tag=NM058_03005;product=MerR family transcriptional regulator;protein_id=UTX05734.1;transl_table=11 CP101611.1 Genbank pseudogene 571304 572749 . - . ID=gene-NM058_03010;Name=cls;gbkey=Gene;gene=cls;gene_biotype=pseudogene;locus_tag=NM058_03010;pseudo=true CP101611.1 Protein Homology CDS 571304 572749 . - 0 ID=cds-NM058_03010;Parent=gene-NM058_03010;Note=frameshifted;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391540.1;locus_tag=NM058_03010;product=cardiolipin synthase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 572994 573431 . + . ID=gene-NM058_03015;Name=NM058_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03015 CP101611.1 Protein Homology CDS 572994 573431 . + 0 ID=cds-UTX05735.1;Parent=gene-NM058_03015;Dbxref=NCBI_GP:UTX05735.1;Name=UTX05735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003235711.1;locus_tag=NM058_03015;product=YwnF family protein;protein_id=UTX05735.1;transl_table=11 CP101611.1 Genbank gene 573563 574612 . - . ID=gene-NM058_03020;Name=pseI;gbkey=Gene;gene=pseI;gene_biotype=protein_coding;locus_tag=NM058_03020 CP101611.1 Protein Homology CDS 573563 574612 . - 0 ID=cds-UTX05736.1;Parent=gene-NM058_03020;Dbxref=NCBI_GP:UTX05736.1;Name=UTX05736.1;Ontology_term=GO:0016765;gbkey=CDS;gene=pseI;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010332201.1;locus_tag=NM058_03020;product=pseudaminic acid synthase;protein_id=UTX05736.1;transl_table=11 CP101611.1 Genbank gene 574682 575272 . - . ID=gene-NM058_03025;Name=pseH;gbkey=Gene;gene=pseH;gene_biotype=protein_coding;locus_tag=NM058_03025 CP101611.1 Protein Homology CDS 574682 575272 . - 0 ID=cds-UTX05737.1;Parent=gene-NM058_03025;Dbxref=NCBI_GP:UTX05737.1;Name=UTX05737.1;Ontology_term=GO:0009058,GO:0008080;gbkey=CDS;gene=pseH;go_function=N-acetyltransferase activity|0008080||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019715998.1;locus_tag=NM058_03025;product=UDP-4-amino-4%2C6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase;protein_id=UTX05737.1;transl_table=11 CP101611.1 Genbank gene 575288 576379 . - . ID=gene-NM058_03030;Name=pseG;gbkey=Gene;gene=pseG;gene_biotype=protein_coding;locus_tag=NM058_03030 CP101611.1 Protein Homology CDS 575288 576379 . - 0 ID=cds-UTX05738.1;Parent=gene-NM058_03030;Dbxref=NCBI_GP:UTX05738.1;Name=UTX05738.1;Ontology_term=GO:0016758;gbkey=CDS;gene=pseG;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003326586.1;locus_tag=NM058_03030;product=UDP-2%2C4-diacetamido-2%2C4%2C6-trideoxy-beta-L-altropyranose hydrolase;protein_id=UTX05738.1;transl_table=11 CP101611.1 Genbank gene 576395 577153 . - . ID=gene-NM058_03035;Name=NM058_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03035 CP101611.1 Protein Homology CDS 576395 577153 . - 0 ID=cds-UTX05739.1;Parent=gene-NM058_03035;Dbxref=NCBI_GP:UTX05739.1;Name=UTX05739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003326587.1;locus_tag=NM058_03035;product=glycosyltransferase family protein;protein_id=UTX05739.1;transl_table=11 CP101611.1 Genbank gene 577165 578361 . - . ID=gene-NM058_03040;Name=pseC;gbkey=Gene;gene=pseC;gene_biotype=protein_coding;locus_tag=NM058_03040 CP101611.1 Protein Homology CDS 577165 578361 . - 0 ID=cds-UTX05740.1;Parent=gene-NM058_03040;Dbxref=NCBI_GP:UTX05740.1;Name=UTX05740.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pseC;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003326588.1;locus_tag=NM058_03040;product=UDP-4-amino-4%2C6-dideoxy-N-acetyl-beta-L-altrosamine transaminase;protein_id=UTX05740.1;transl_table=11 CP101611.1 Genbank pseudogene 578376 579319 . - . ID=gene-NM058_03045;Name=NM058_03045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03045;pseudo=true CP101611.1 Protein Homology CDS 578376 579319 . - 0 ID=cds-NM058_03045;Parent=gene-NM058_03045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003235700.1;locus_tag=NM058_03045;product=SDR family NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 579339 580340 . - . ID=gene-NM058_03050;Name=NM058_03050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03050;pseudo=true CP101611.1 Protein Homology CDS 579339 580340 . - 0 ID=cds-NM058_03050;Parent=gene-NM058_03050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010328884.1;locus_tag=NM058_03050;product=polysaccharide biosynthesis protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 580672 581190 . - . ID=gene-NM058_03055;Name=NM058_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03055 CP101611.1 Protein Homology CDS 580672 581190 . - 0 ID=cds-UTX05741.1;Parent=gene-NM058_03055;Dbxref=NCBI_GP:UTX05741.1;Name=UTX05741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391538.1;locus_tag=NM058_03055;product=DUF5362 domain-containing protein;protein_id=UTX05741.1;transl_table=11 CP101611.1 Genbank gene 581187 581678 . - . ID=gene-NM058_03060;Name=NM058_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03060 CP101611.1 Protein Homology CDS 581187 581678 . - 0 ID=cds-UTX06957.1;Parent=gene-NM058_03060;Dbxref=NCBI_GP:UTX06957.1;Name=UTX06957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391537.1;locus_tag=NM058_03060;product=GNAT family N-acetyltransferase;protein_id=UTX06957.1;transl_table=11 CP101611.1 Genbank pseudogene 581820 582690 . + . ID=gene-NM058_03065;Name=spoIIQ;gbkey=Gene;gene=spoIIQ;gene_biotype=pseudogene;locus_tag=NM058_03065;pseudo=true CP101611.1 Protein Homology CDS 581820 582690 . + 0 ID=cds-NM058_03065;Parent=gene-NM058_03065;Note=frameshifted%3B internal stop;gbkey=CDS;gene=spoIIQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391536.1;locus_tag=NM058_03065;product=stage II sporulation protein spoIIQ;pseudo=true;transl_table=11 CP101611.1 Genbank gene 582800 583222 . + . ID=gene-NM058_03070;Name=NM058_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03070 CP101611.1 Protein Homology CDS 582800 583222 . + 0 ID=cds-UTX05742.1;Parent=gene-NM058_03070;Dbxref=NCBI_GP:UTX05742.1;Name=UTX05742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391535.1;locus_tag=NM058_03070;product=VanZ family protein;protein_id=UTX05742.1;transl_table=11 CP101611.1 Genbank pseudogene 583263 583843 . - . ID=gene-NM058_03075;Name=bcrC;gbkey=Gene;gene=bcrC;gene_biotype=pseudogene;locus_tag=NM058_03075;pseudo=true CP101611.1 Protein Homology CDS 583263 583843 . - 0 ID=cds-NM058_03075;Parent=gene-NM058_03075;Note=frameshifted;gbkey=CDS;gene=bcrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391534.1;locus_tag=NM058_03075;product=undecaprenyl-diphosphate phosphatase BcrC;pseudo=true;transl_table=11 CP101611.1 Genbank gene 584022 584372 . - . ID=gene-NM058_03080;Name=NM058_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03080 CP101611.1 Protein Homology CDS 584022 584372 . - 0 ID=cds-UTX05743.1;Parent=gene-NM058_03080;Dbxref=NCBI_GP:UTX05743.1;Name=UTX05743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391533.1;locus_tag=NM058_03080;product=P-II family nitrogen regulator;protein_id=UTX05743.1;transl_table=11 CP101611.1 Genbank gene 584384 585598 . - . ID=gene-NM058_03085;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;gene_synonym=ngrA;locus_tag=NM058_03085 CP101611.1 Protein Homology CDS 584384 585598 . - 0 ID=cds-UTX05744.1;Parent=gene-NM058_03085;Dbxref=NCBI_GP:UTX05744.1;Name=UTX05744.1;gbkey=CDS;gene=amtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391532.1;locus_tag=NM058_03085;product=ammonium transporter AmtB;protein_id=UTX05744.1;transl_table=11 CP101611.1 Genbank gene 585876 586337 . + . ID=gene-NM058_03090;Name=NM058_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03090 CP101611.1 Protein Homology CDS 585876 586337 . + 0 ID=cds-UTX05745.1;Parent=gene-NM058_03090;Dbxref=NCBI_GP:UTX05745.1;Name=UTX05745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009968304.1;locus_tag=NM058_03090;product=hypothetical protein;protein_id=UTX05745.1;transl_table=11 CP101611.1 Genbank gene 586522 587091 . + . ID=gene-NM058_03095;Name=NM058_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03095 CP101611.1 Protein Homology CDS 586522 587091 . + 0 ID=cds-UTX05746.1;Parent=gene-NM058_03095;Dbxref=NCBI_GP:UTX05746.1;Name=UTX05746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391530.2;locus_tag=NM058_03095;product=hydrolase;protein_id=UTX05746.1;transl_table=11 CP101611.1 Genbank pseudogene 587091 588448 . + . ID=gene-NM058_03100;Name=NM058_03100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03100;pseudo=true CP101611.1 Protein Homology CDS 587091 588448 . + 0 ID=cds-NM058_03100;Parent=gene-NM058_03100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391529.1;locus_tag=NM058_03100;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 588631 590103 . + . ID=gene-NM058_03105;Name=pucI;gbkey=Gene;gene=pucI;gene_biotype=protein_coding;locus_tag=NM058_03105 CP101611.1 Protein Homology CDS 588631 590103 . + 0 ID=cds-UTX05747.1;Parent=gene-NM058_03105;Dbxref=NCBI_GP:UTX05747.1;Name=UTX05747.1;gbkey=CDS;gene=pucI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391528.1;locus_tag=NM058_03105;product=allantoin permease;protein_id=UTX05747.1;transl_table=11 CP101611.1 Genbank gene 590208 591614 . + . ID=gene-NM058_03110;Name=NM058_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03110 CP101611.1 Protein Homology CDS 590208 591614 . + 0 ID=cds-UTX05748.1;Parent=gene-NM058_03110;Dbxref=NCBI_GP:UTX05748.1;Name=UTX05748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391527.1;locus_tag=NM058_03110;product=right-handed parallel beta-helix repeat-containing protein;protein_id=UTX05748.1;transl_table=11 CP101611.1 Genbank pseudogene 591710 592899 . - . ID=gene-NM058_03115;Name=NM058_03115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03115;pseudo=true CP101611.1 Protein Homology CDS 591710 592899 . - 0 ID=cds-NM058_03115;Parent=gene-NM058_03115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391526.1;locus_tag=NM058_03115;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 592921 593334 . - . ID=gene-NM058_03120;Name=NM058_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03120 CP101611.1 Protein Homology CDS 592921 593334 . - 0 ID=cds-UTX05749.1;Parent=gene-NM058_03120;Dbxref=NCBI_GP:UTX05749.1;Name=UTX05749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391525.1;locus_tag=NM058_03120;product=MarR family transcriptional regulator;protein_id=UTX05749.1;transl_table=11 CP101611.1 Genbank gene 593560 593670 . + . ID=gene-NM058_03125;Name=NM058_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03125 CP101611.1 Protein Homology CDS 593560 593670 . + 0 ID=cds-UTX05750.1;Parent=gene-NM058_03125;Dbxref=NCBI_GP:UTX05750.1;Name=UTX05750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391524.1;locus_tag=NM058_03125;product=protein usd;protein_id=UTX05750.1;transl_table=11 CP101611.1 Genbank gene 593685 593966 . + . ID=gene-NM058_03130;Name=spoIIID;gbkey=Gene;gene=spoIIID;gene_biotype=protein_coding;locus_tag=NM058_03130 CP101611.1 Protein Homology CDS 593685 593966 . + 0 ID=cds-UTX05751.1;Parent=gene-NM058_03130;Dbxref=NCBI_GP:UTX05751.1;Name=UTX05751.1;Ontology_term=GO:0030436,GO:0140110;gbkey=CDS;gene=spoIIID;go_function=transcription regulator activity|0140110||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391523.1;locus_tag=NM058_03130;product=sporulation transcriptional regulator SpoIIID;protein_id=UTX05751.1;transl_table=11 CP101611.1 Genbank pseudogene 594145 595144 . + . ID=gene-NM058_03135;Name=mbl;gbkey=Gene;gene=mbl;gene_biotype=pseudogene;locus_tag=NM058_03135;pseudo=true CP101611.1 Protein Homology CDS 594145 595144 . + 0 ID=cds-NM058_03135;Parent=gene-NM058_03135;Note=frameshifted;gbkey=CDS;gene=mbl;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391522.2;locus_tag=NM058_03135;product=cell shape-determining protein Mbl;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 595305 596116 . + . ID=gene-NM058_03140;Name=flhO;gbkey=Gene;gene=flhO;gene_biotype=pseudogene;locus_tag=NM058_03140;pseudo=true CP101611.1 Protein Homology CDS 595305 596116 . + 0 ID=cds-NM058_03140;Parent=gene-NM058_03140;Note=frameshifted;gbkey=CDS;gene=flhO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391521.1;locus_tag=NM058_03140;product=flagellar hook-basal body complex protein FlhO;pseudo=true;transl_table=11 CP101611.1 Genbank gene 596149 596958 . + . ID=gene-NM058_03145;Name=flhP;gbkey=Gene;gene=flhP;gene_biotype=protein_coding;locus_tag=NM058_03145 CP101611.1 Protein Homology CDS 596149 596958 . + 0 ID=cds-UTX05752.1;Parent=gene-NM058_03145;Dbxref=NCBI_GP:UTX05752.1;Name=UTX05752.1;gbkey=CDS;gene=flhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391520.2;locus_tag=NM058_03145;product=flagellar hook-basal body complex protein FlhP;protein_id=UTX05752.1;transl_table=11 CP101611.1 Genbank pseudogene 596979 598042 . - . ID=gene-NM058_03150;Name=rapD;gbkey=Gene;gene=rapD;gene_biotype=pseudogene;locus_tag=NM058_03150;pseudo=true CP101611.1 Protein Homology CDS 596979 598042 . - 0 ID=cds-NM058_03150;Parent=gene-NM058_03150;Note=frameshifted;gbkey=CDS;gene=rapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391519.1;locus_tag=NM058_03150;product=aspartate phosphatase RapD;pseudo=true;transl_table=11 CP101611.1 Genbank gene 598234 598659 . + . ID=gene-NM058_03155;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=NM058_03155 CP101611.1 Protein Homology CDS 598234 598659 . + 0 ID=cds-UTX05753.1;Parent=gene-NM058_03155;Dbxref=NCBI_GP:UTX05753.1;Name=UTX05753.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391518.2;locus_tag=NM058_03155;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=UTX05753.1;transl_table=11 CP101611.1 Genbank gene 598732 599124 . + . ID=gene-NM058_03160;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=NM058_03160 CP101611.1 Protein Homology CDS 598732 599124 . + 0 ID=cds-UTX05754.1;Parent=gene-NM058_03160;Dbxref=NCBI_GP:UTX05754.1;Name=UTX05754.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391517.1;locus_tag=NM058_03160;product=large conductance mechanosensitive channel protein MscL;protein_id=UTX05754.1;transl_table=11 CP101611.1 Genbank gene 599164 600129 . - . ID=gene-NM058_03165;Name=NM058_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03165 CP101611.1 Protein Homology CDS 599164 600129 . - 0 ID=cds-UTX06958.1;Parent=gene-NM058_03165;Dbxref=NCBI_GP:UTX06958.1;Name=UTX06958.1;Ontology_term=GO:0000160,GO:0000155,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391516.1;locus_tag=NM058_03165;product=histidine kinase;protein_id=UTX06958.1;transl_table=11 CP101611.1 Genbank pseudogene 600358 601620 . - . ID=gene-NM058_03170;Name=NM058_03170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03170;pseudo=true CP101611.1 Protein Homology CDS 600358 601620 . - 0 ID=cds-NM058_03170;Parent=gene-NM058_03170;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019315.2;locus_tag=NM058_03170;product=sensor histidine kinase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 602426 603502 . + . ID=gene-NM058_03175;Name=NM058_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03175 CP101611.1 Protein Homology CDS 602426 603502 . + 0 ID=cds-UTX05755.1;Parent=gene-NM058_03175;Dbxref=NCBI_GP:UTX05755.1;Name=UTX05755.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014665662.1;locus_tag=NM058_03175;product=response regulator;protein_id=UTX05755.1;transl_table=11 CP101611.1 Genbank pseudogene 603816 609756 . + . ID=gene-NM058_03180;Name=NM058_03180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03180;pseudo=true CP101611.1 Protein Homology CDS 603816 609756 . + 0 ID=cds-NM058_03180;Parent=gene-NM058_03180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019715970.1;locus_tag=NM058_03180;product=SpaA isopeptide-forming pilin-related protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 609848 610503 . + . ID=gene-NM058_03185;Name=NM058_03185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03185;pseudo=true CP101611.1 Protein Homology CDS 609848 610503 . + 0 ID=cds-NM058_03185;Parent=gene-NM058_03185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259684.1;locus_tag=NM058_03185;product=class A sortase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 610576 611379 . - . ID=gene-NM058_03190;Name=blaOXA;gbkey=Gene;gene=blaOXA;gene_biotype=protein_coding;locus_tag=NM058_03190 CP101611.1 Protein Homology CDS 610576 611379 . - 0 ID=cds-UTX05756.1;Parent=gene-NM058_03190;Dbxref=NCBI_GP:UTX05756.1;Name=UTX05756.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;gene=blaOXA;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259683.1;locus_tag=NM058_03190;product=class D beta-lactamase;protein_id=UTX05756.1;transl_table=11 CP101611.1 Genbank gene 611401 611811 . - . ID=gene-NM058_03195;Name=NM058_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03195 CP101611.1 Protein Homology CDS 611401 611811 . - 0 ID=cds-UTX06959.1;Parent=gene-NM058_03195;Dbxref=NCBI_GP:UTX06959.1;Name=UTX06959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391514.1;locus_tag=NM058_03195;product=YwpF-like family protein;protein_id=UTX06959.1;transl_table=11 CP101611.1 Genbank gene 611987 612370 . + . ID=gene-NM058_03200;Name=NM058_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03200 CP101611.1 Protein Homology CDS 611987 612370 . + 0 ID=cds-UTX05757.1;Parent=gene-NM058_03200;Dbxref=NCBI_GP:UTX05757.1;Name=UTX05757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391513.1;locus_tag=NM058_03200;product=hypothetical protein;protein_id=UTX05757.1;transl_table=11 CP101611.1 Genbank gene 612447 612788 . + . ID=gene-NM058_03205;Name=ssbB;gbkey=Gene;gene=ssbB;gene_biotype=protein_coding;locus_tag=NM058_03205 CP101611.1 Protein Homology CDS 612447 612788 . + 0 ID=cds-UTX05758.1;Parent=gene-NM058_03205;Dbxref=NCBI_GP:UTX05758.1;Name=UTX05758.1;Ontology_term=GO:0003697;gbkey=CDS;gene=ssbB;go_function=single-stranded DNA binding|0003697||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391512.2;locus_tag=NM058_03205;product=single-stranded DNA-binding protein SsbB;protein_id=UTX05758.1;transl_table=11 CP101611.1 Genbank gene 613005 613781 . + . ID=gene-NM058_03210;Name=glcR;gbkey=Gene;gene=glcR;gene_biotype=protein_coding;locus_tag=NM058_03210 CP101611.1 Protein Homology CDS 613005 613781 . + 0 ID=cds-UTX05759.1;Parent=gene-NM058_03210;Dbxref=NCBI_GP:UTX05759.1;Name=UTX05759.1;gbkey=CDS;gene=glcR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010328863.1;locus_tag=NM058_03210;product=transcriptional regulator GlcR;protein_id=UTX05759.1;transl_table=11 CP101611.1 Genbank gene 613787 614644 . + . ID=gene-NM058_03215;Name=NM058_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03215 CP101611.1 Protein Homology CDS 613787 614644 . + 0 ID=cds-UTX05760.1;Parent=gene-NM058_03215;Dbxref=NCBI_GP:UTX05760.1;Name=UTX05760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391510.1;locus_tag=NM058_03215;product=Cof-type HAD-IIB family hydrolase;protein_id=UTX05760.1;transl_table=11 CP101611.1 Genbank gene 614772 617540 . - . ID=gene-NM058_03220;Name=NM058_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03220 CP101611.1 Protein Homology CDS 614772 617540 . - 0 ID=cds-UTX05761.1;Parent=gene-NM058_03220;Dbxref=NCBI_GP:UTX05761.1;Name=UTX05761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391509.1;locus_tag=NM058_03220;product=DEAD/DEAH box helicase;protein_id=UTX05761.1;transl_table=11 CP101611.1 Genbank gene 617527 619137 . - . ID=gene-NM058_03225;Name=NM058_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03225 CP101611.1 Protein Homology CDS 617527 619137 . - 0 ID=cds-UTX05762.1;Parent=gene-NM058_03225;Dbxref=NCBI_GP:UTX05762.1;Name=UTX05762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391508.2;locus_tag=NM058_03225;product=SWIM zinc finger family protein;protein_id=UTX05762.1;transl_table=11 CP101611.1 Genbank gene 619341 619484 . + . ID=gene-NM058_03230;Name=NM058_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03230 CP101611.1 Protein Homology CDS 619341 619484 . + 0 ID=cds-UTX05763.1;Parent=gene-NM058_03230;Dbxref=NCBI_GP:UTX05763.1;Name=UTX05763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097792.1;locus_tag=NM058_03230;product=hypothetical protein;protein_id=UTX05763.1;transl_table=11 CP101611.1 Genbank gene 619719 620465 . + . ID=gene-NM058_03235;Name=tkmA;gbkey=Gene;gene=tkmA;gene_biotype=protein_coding;locus_tag=NM058_03235 CP101611.1 Protein Homology CDS 619719 620465 . + 0 ID=cds-UTX05764.1;Parent=gene-NM058_03235;Dbxref=NCBI_GP:UTX05764.1;Name=UTX05764.1;gbkey=CDS;gene=tkmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259676.1;locus_tag=NM058_03235;product=protein-tyrosine kinase activator TkmA;protein_id=UTX05764.1;transl_table=11 CP101611.1 Genbank gene 620455 621171 . + . ID=gene-NM058_03240;Name=NM058_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03240 CP101611.1 Protein Homology CDS 620455 621171 . + 0 ID=cds-UTX05765.1;Parent=gene-NM058_03240;Dbxref=NCBI_GP:UTX05765.1;Name=UTX05765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010328857.1;locus_tag=NM058_03240;product=CpsD/CapB family tyrosine-protein kinase;protein_id=UTX05765.1;transl_table=11 CP101611.1 Genbank pseudogene 621252 622013 . + . ID=gene-NM058_03245;Name=NM058_03245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03245;pseudo=true CP101611.1 Protein Homology CDS 621252 622013 . + 0 ID=cds-NM058_03245;Parent=gene-NM058_03245;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039343.1;locus_tag=NM058_03245;product=tyrosine protein phosphatase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 622175 623497 . + . ID=gene-NM058_03250;Name=uglF;gbkey=Gene;gene=uglF;gene_biotype=protein_coding;gene_synonym=ywqF;locus_tag=NM058_03250 CP101611.1 Protein Homology CDS 622175 623497 . + 0 ID=cds-UTX05766.1;Parent=gene-NM058_03250;Dbxref=NCBI_GP:UTX05766.1;Name=UTX05766.1;gbkey=CDS;gene=uglF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391504.1;locus_tag=NM058_03250;product=UDP-glucose 6-dehydrogenase UglF;protein_id=UTX05766.1;transl_table=11 CP101611.1 Genbank gene 623869 624291 . + . ID=gene-NM058_03255;Name=NM058_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03255 CP101611.1 Protein Homology CDS 623869 624291 . + 0 ID=cds-UTX05767.1;Parent=gene-NM058_03255;Dbxref=NCBI_GP:UTX05767.1;Name=UTX05767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391502.1;locus_tag=NM058_03255;product=DUF5082 family protein;protein_id=UTX05767.1;transl_table=11 CP101611.1 Genbank gene 624301 624561 . + . ID=gene-NM058_03260;Name=NM058_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03260 CP101611.1 Protein Homology CDS 624301 624561 . + 0 ID=cds-UTX05768.1;Parent=gene-NM058_03260;Dbxref=NCBI_GP:UTX05768.1;Name=UTX05768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391501.1;locus_tag=NM058_03260;product=YwqI/YxiC family protein;protein_id=UTX05768.1;transl_table=11 CP101611.1 Genbank gene 624580 626397 . + . ID=gene-NM058_03265;Name=NM058_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03265 CP101611.1 Protein Homology CDS 624580 626397 . + 0 ID=cds-UTX05769.1;Parent=gene-NM058_03265;Dbxref=NCBI_GP:UTX05769.1;Name=UTX05769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003326630.1;locus_tag=NM058_03265;product=T7SS effector LXG polymorphic toxin;protein_id=UTX05769.1;transl_table=11 CP101611.1 Genbank gene 626403 626954 . + . ID=gene-NM058_03270;Name=NM058_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03270 CP101611.1 Protein Homology CDS 626403 626954 . + 0 ID=cds-UTX05770.1;Parent=gene-NM058_03270;Dbxref=NCBI_GP:UTX05770.1;Name=UTX05770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003235623.1;locus_tag=NM058_03270;product=hypothetical protein;protein_id=UTX05770.1;transl_table=11 CP101611.1 Genbank gene 627044 627697 . + . ID=gene-NM058_03275;Name=NM058_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03275 CP101611.1 Protein Homology CDS 627044 627697 . + 0 ID=cds-UTX05771.1;Parent=gene-NM058_03275;Dbxref=NCBI_GP:UTX05771.1;Name=UTX05771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013353852.1;locus_tag=NM058_03275;product=hypothetical protein;protein_id=UTX05771.1;transl_table=11 CP101611.1 Genbank pseudogene 627790 627852 . + . ID=gene-NM058_03280;Name=NM058_03280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03280;pseudo=true CP101611.1 Protein Homology CDS 627790 627852 . + 0 ID=cds-NM058_03280;Parent=gene-NM058_03280;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391498.2;locus_tag=NM058_03280;product=endonuclease V;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 627970 628850 . - . ID=gene-NM058_03285;Name=NM058_03285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03285;pseudo=true CP101611.1 Protein Homology CDS 627970 628850 . - 0 ID=cds-NM058_03285;Parent=gene-NM058_03285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391497.1;locus_tag=NM058_03285;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank gene 628973 629518 . + . ID=gene-NM058_03290;Name=NM058_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03290 CP101611.1 Protein Homology CDS 628973 629518 . + 0 ID=cds-UTX05772.1;Parent=gene-NM058_03290;Dbxref=NCBI_GP:UTX05772.1;Name=UTX05772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391496.1;locus_tag=NM058_03290;product=flavodoxin family protein;protein_id=UTX05772.1;transl_table=11 CP101611.1 Genbank gene 629515 629733 . + . ID=gene-NM058_03295;Name=NM058_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03295 CP101611.1 Protein Homology CDS 629515 629733 . + 0 ID=cds-UTX05773.1;Parent=gene-NM058_03295;Dbxref=NCBI_GP:UTX05773.1;Name=UTX05773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003243378.1;locus_tag=NM058_03295;product=hypothetical protein;protein_id=UTX05773.1;transl_table=11 CP101611.1 Genbank gene 629759 630295 . - . ID=gene-NM058_03300;Name=chrA;gbkey=Gene;gene=chrA;gene_biotype=protein_coding;gene_synonym=chr3C,ywrA;locus_tag=NM058_03300 CP101611.1 Protein Homology CDS 629759 630295 . - 0 ID=cds-UTX05774.1;Parent=gene-NM058_03300;Dbxref=NCBI_GP:UTX05774.1;Name=UTX05774.1;gbkey=CDS;gene=chrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391494.1;locus_tag=NM058_03300;product=chromate resistance efflux protein ChrA;protein_id=UTX05774.1;transl_table=11 CP101611.1 Genbank gene 630292 630885 . - . ID=gene-NM058_03305;Name=chrB;gbkey=Gene;gene=chrB;gene_biotype=protein_coding;locus_tag=NM058_03305 CP101611.1 Protein Homology CDS 630292 630885 . - 0 ID=cds-UTX05775.1;Parent=gene-NM058_03305;Dbxref=NCBI_GP:UTX05775.1;Name=UTX05775.1;gbkey=CDS;gene=chrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391493.1;locus_tag=NM058_03305;product=chromate efflux transporter subunit ChrB;protein_id=UTX05775.1;transl_table=11 CP101611.1 Genbank gene 630899 631375 . - . ID=gene-NM058_03310;Name=chrS;gbkey=Gene;gene=chrS;gene_biotype=protein_coding;locus_tag=NM058_03310 CP101611.1 Protein Homology CDS 630899 631375 . - 0 ID=cds-UTX05776.1;Parent=gene-NM058_03310;Dbxref=NCBI_GP:UTX05776.1;Name=UTX05776.1;gbkey=CDS;gene=chrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391492.1;locus_tag=NM058_03310;product=chromate efflux transcriptional regulator ChrS;protein_id=UTX05776.1;transl_table=11 CP101611.1 Genbank pseudogene 631589 633164 . + . ID=gene-NM058_03315;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=pseudogene;locus_tag=NM058_03315;pseudo=true CP101611.1 Protein Homology CDS 631589 633164 . + 0 ID=cds-NM058_03315;Parent=gene-NM058_03315;Note=frameshifted;Ontology_term=GO:0006750;gbkey=CDS;gene=ggt;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391491.1;locus_tag=NM058_03315;product=gamma-glutamyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 633169 633504 . - . ID=gene-NM058_03320;Name=NM058_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03320 CP101611.1 Protein Homology CDS 633169 633504 . - 0 ID=cds-UTX05777.1;Parent=gene-NM058_03320;Dbxref=NCBI_GP:UTX05777.1;Name=UTX05777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391490.1;locus_tag=NM058_03320;product=DUF4181 domain-containing protein;protein_id=UTX05777.1;transl_table=11 CP101611.1 Genbank gene 633662 634279 . - . ID=gene-NM058_03325;Name=NM058_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03325 CP101611.1 Protein Homology CDS 633662 634279 . - 0 ID=cds-UTX05778.1;Parent=gene-NM058_03325;Dbxref=NCBI_GP:UTX05778.1;Name=UTX05778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391489.1;locus_tag=NM058_03325;product=flavin reductase family protein;protein_id=UTX05778.1;transl_table=11 CP101611.1 Genbank pseudogene 634448 634957 . - . ID=gene-NM058_03330;Name=NM058_03330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03330;pseudo=true CP101611.1 Protein Homology CDS 634448 634957 . - 0 ID=cds-NM058_03330;Parent=gene-NM058_03330;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391488.1;locus_tag=NM058_03330;product=spore gernimation protein GerQ;pseudo=true;transl_table=11 CP101611.1 Genbank gene 635342 636433 . + . ID=gene-NM058_03335;Name=NM058_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03335 CP101611.1 Protein Homology CDS 635342 636433 . + 0 ID=cds-UTX05779.1;Parent=gene-NM058_03335;Dbxref=NCBI_GP:UTX05779.1;Name=UTX05779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003235593.1;locus_tag=NM058_03335;product=CotH kinase family protein;protein_id=UTX05779.1;transl_table=11 CP101611.1 Genbank gene 636473 637360 . - . ID=gene-NM058_03340;Name=NM058_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03340 CP101611.1 Protein Homology CDS 636473 637360 . - 0 ID=cds-UTX05780.1;Parent=gene-NM058_03340;Dbxref=NCBI_GP:UTX05780.1;Name=UTX05780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014115417.1;locus_tag=NM058_03340;product=LysR family transcriptional regulator;protein_id=UTX05780.1;transl_table=11 CP101611.1 Genbank gene 637520 639232 . + . ID=gene-NM058_03345;Name=alsS;gbkey=Gene;gene=alsS;gene_biotype=protein_coding;locus_tag=NM058_03345 CP101611.1 Protein Homology CDS 637520 639232 . + 0 ID=cds-UTX05781.1;Parent=gene-NM058_03345;Dbxref=NCBI_GP:UTX05781.1;Name=UTX05781.1;Ontology_term=GO:0006113,GO:0045151,GO:0003984;gbkey=CDS;gene=alsS;go_function=acetolactate synthase activity|0003984||IEA;go_process=fermentation|0006113||IEA,acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391482.2;locus_tag=NM058_03345;product=acetolactate synthase AlsS;protein_id=UTX05781.1;transl_table=11 CP101611.1 Genbank gene 639294 640061 . + . ID=gene-NM058_03350;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=NM058_03350 CP101611.1 Protein Homology CDS 639294 640061 . + 0 ID=cds-UTX05782.1;Parent=gene-NM058_03350;Dbxref=NCBI_GP:UTX05782.1;Name=UTX05782.1;Ontology_term=GO:0006113,GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=fermentation|0006113||IEA,acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391481.1;locus_tag=NM058_03350;product=acetolactate decarboxylase;protein_id=UTX05782.1;transl_table=11 CP101611.1 Genbank pseudogene 640160 640686 . + . ID=gene-NM058_03355;Name=NM058_03355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03355;pseudo=true CP101611.1 Protein Homology CDS 640160 640686 . + 0 ID=cds-NM058_03355;Parent=gene-NM058_03355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014115415.1;locus_tag=NM058_03355;product=NAD(P)H-dependent oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 640728 641024 . - . ID=gene-NM058_03360;Name=NM058_03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03360 CP101611.1 Protein Homology CDS 640728 641024 . - 0 ID=cds-UTX05783.1;Parent=gene-NM058_03360;Dbxref=NCBI_GP:UTX05783.1;Name=UTX05783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391479.1;locus_tag=NM058_03360;product=DUF3892 domain-containing protein;protein_id=UTX05783.1;transl_table=11 CP101611.1 Genbank gene 641180 641716 . - . ID=gene-NM058_03365;Name=NM058_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03365 CP101611.1 Protein Homology CDS 641180 641716 . - 0 ID=cds-UTX05784.1;Parent=gene-NM058_03365;Dbxref=NCBI_GP:UTX05784.1;Name=UTX05784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391478.1;locus_tag=NM058_03365;product=SH3 domain-containing protein;protein_id=UTX05784.1;transl_table=11 CP101611.1 Genbank pseudogene 641826 642742 . - . ID=gene-NM058_03370;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=pseudogene;locus_tag=NM058_03370;pseudo=true CP101611.1 Protein Homology CDS 641826 642742 . - 0 ID=cds-NM058_03370;Parent=gene-NM058_03370;Note=frameshifted;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391477.1;locus_tag=NM058_03370;product=ribose ABC transporter substrate-binding protein RbsB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 642756 643724 . - . ID=gene-NM058_03375;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=NM058_03375 CP101611.1 Protein Homology CDS 642756 643724 . - 0 ID=cds-UTX05785.1;Parent=gene-NM058_03375;Dbxref=NCBI_GP:UTX05785.1;Name=UTX05785.1;gbkey=CDS;gene=rbsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391476.1;locus_tag=NM058_03375;product=ribose ABC transporter permease RbsC;protein_id=UTX05785.1;transl_table=11 CP101611.1 Genbank pseudogene 643726 645204 . - . ID=gene-NM058_03380;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=pseudogene;locus_tag=NM058_03380;pseudo=true CP101611.1 Protein Homology CDS 643726 645204 . - 0 ID=cds-NM058_03380;Parent=gene-NM058_03380;Note=frameshifted;gbkey=CDS;gene=rbsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391475.1;locus_tag=NM058_03380;product=ribose ABC transporter ATP-binding protein RbsA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 645220 645615 . - . ID=gene-NM058_03385;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=NM058_03385 CP101611.1 Protein Homology CDS 645220 645615 . - 0 ID=cds-UTX05786.1;Parent=gene-NM058_03385;Dbxref=NCBI_GP:UTX05786.1;Name=UTX05786.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391474.1;locus_tag=NM058_03385;product=D-ribose pyranase;protein_id=UTX05786.1;transl_table=11 CP101611.1 Genbank gene 645612 646493 . - . ID=gene-NM058_03390;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=NM058_03390 CP101611.1 Protein Homology CDS 645612 646493 . - 0 ID=cds-UTX06960.1;Parent=gene-NM058_03390;Dbxref=NCBI_GP:UTX06960.1;Name=UTX06960.1;Ontology_term=GO:0019303,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose catabolic process|0019303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391473.1;locus_tag=NM058_03390;product=ribokinase;protein_id=UTX06960.1;transl_table=11 CP101611.1 Genbank pseudogene 646486 647475 . - . ID=gene-NM058_03395;Name=NM058_03395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03395;pseudo=true CP101611.1 Protein Homology CDS 646486 647475 . - 0 ID=cds-NM058_03395;Parent=gene-NM058_03395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003235569.1;locus_tag=NM058_03395;product=LacI family transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank gene 648257 649438 . + . ID=gene-NM058_03400;Name=pgsB;gbkey=Gene;gene=pgsB;gene_biotype=protein_coding;locus_tag=NM058_03400 CP101611.1 Protein Homology CDS 648257 649438 . + 0 ID=cds-UTX05787.1;Parent=gene-NM058_03400;Dbxref=NCBI_GP:UTX05787.1;Name=UTX05787.1;Ontology_term=GO:0070501,GO:0016881;gbkey=CDS;gene=pgsB;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=poly-gamma-glutamate biosynthetic process|0070501||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391471.2;locus_tag=NM058_03400;product=poly-gamma-glutamate synthase PgsB;protein_id=UTX05787.1;transl_table=11 CP101611.1 Genbank gene 649453 649902 . + . ID=gene-NM058_03405;Name=pgsC;gbkey=Gene;gene=pgsC;gene_biotype=protein_coding;locus_tag=NM058_03405 CP101611.1 Protein Homology CDS 649453 649902 . + 0 ID=cds-UTX05788.1;Parent=gene-NM058_03405;Dbxref=NCBI_GP:UTX05788.1;Name=UTX05788.1;Ontology_term=GO:0070501,GO:0016881;gbkey=CDS;gene=pgsC;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=poly-gamma-glutamate biosynthetic process|0070501||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391470.1;locus_tag=NM058_03405;product=poly-gamma-glutamate biosynthesis protein PgsC;protein_id=UTX05788.1;transl_table=11 CP101611.1 Genbank pseudogene 649921 651062 . + . ID=gene-NM058_03410;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=pseudogene;locus_tag=NM058_03410;pseudo=true CP101611.1 Protein Homology CDS 649921 651062 . + 0 ID=cds-NM058_03410;Parent=gene-NM058_03410;Note=frameshifted;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391469.1;locus_tag=NM058_03410;product=capsular polyglutamate synthetase PgsA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 651077 651244 . + . ID=gene-NM058_03415;Name=NM058_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03415 CP101611.1 Protein Homology CDS 651077 651244 . + 0 ID=cds-UTX05789.1;Parent=gene-NM058_03415;Dbxref=NCBI_GP:UTX05789.1;Name=UTX05789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391468.1;locus_tag=NM058_03415;product=hypothetical protein;protein_id=UTX05789.1;transl_table=11 CP101611.1 Genbank gene 651385 652626 . + . ID=gene-NM058_03420;Name=pgdS;gbkey=Gene;gene=pgdS;gene_biotype=protein_coding;locus_tag=NM058_03420 CP101611.1 Protein Homology CDS 651385 652626 . + 0 ID=cds-UTX05790.1;Parent=gene-NM058_03420;Dbxref=NCBI_GP:UTX05790.1;Name=UTX05790.1;gbkey=CDS;gene=pgdS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391467.1;locus_tag=NM058_03420;product=gamma-DL-glutamyl hydrolase;protein_id=UTX05790.1;transl_table=11 CP101611.1 Genbank gene 652863 653723 . - . ID=gene-NM058_03425;Name=ywtE;gbkey=Gene;gene=ywtE;gene_biotype=protein_coding;gene_synonym=ribZB;locus_tag=NM058_03425 CP101611.1 Protein Homology CDS 652863 653723 . - 0 ID=cds-UTX05791.1;Parent=gene-NM058_03425;Dbxref=NCBI_GP:UTX05791.1;Name=UTX05791.1;Ontology_term=GO:0043726;gbkey=CDS;gene=ywtE;go_function=5-amino-6-(5-phosphoribitylamino)uracil phosphatase activity|0043726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391466.1;locus_tag=NM058_03425;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YwtE;protein_id=UTX05791.1;transl_table=11 CP101611.1 Genbank gene 653881 654849 . - . ID=gene-NM058_03430;Name=tagT;gbkey=Gene;gene=tagT;gene_biotype=protein_coding;locus_tag=NM058_03430 CP101611.1 Protein Homology CDS 653881 654849 . - 0 ID=cds-UTX05792.1;Parent=gene-NM058_03430;Dbxref=NCBI_GP:UTX05792.1;Name=UTX05792.1;gbkey=CDS;gene=tagT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391465.2;locus_tag=NM058_03430;product=polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagT;protein_id=UTX05792.1;transl_table=11 CP101611.1 Genbank pseudogene 655181 656553 . + . ID=gene-NM058_03435;Name=NM058_03435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03435;pseudo=true CP101611.1 Protein Homology CDS 655181 656553 . + 0 ID=cds-NM058_03435;Parent=gene-NM058_03435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391464.2;locus_tag=NM058_03435;product=sugar porter family MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 656590 657714 . - . ID=gene-NM058_03440;Name=NM058_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03440 CP101611.1 Protein Homology CDS 656590 657714 . - 0 ID=cds-UTX05793.1;Parent=gene-NM058_03440;Dbxref=NCBI_GP:UTX05793.1;Name=UTX05793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014478155.1;locus_tag=NM058_03440;product=Ger(x)C family spore germination protein;protein_id=UTX05793.1;transl_table=11 CP101611.1 Genbank pseudogene 657711 658816 . - . ID=gene-NM058_03445;Name=NM058_03445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03445;pseudo=true CP101611.1 Protein Homology CDS 657711 658816 . - 0 ID=cds-NM058_03445;Parent=gene-NM058_03445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391462.2;locus_tag=NM058_03445;product=spore germination protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 658822 660272 . - . ID=gene-NM058_03450;Name=NM058_03450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03450;pseudo=true CP101611.1 Protein Homology CDS 658822 660272 . - 0 ID=cds-NM058_03450;Parent=gene-NM058_03450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391461.2;locus_tag=NM058_03450;product=spore germination protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 660538 661488 . + . ID=gene-NM058_03455;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=NM058_03455 CP101611.1 Protein Homology CDS 660538 661488 . + 0 ID=cds-UTX05794.1;Parent=gene-NM058_03455;Dbxref=NCBI_GP:UTX05794.1;Name=UTX05794.1;Ontology_term=GO:0005975,GO:0004476;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391460.1;locus_tag=NM058_03455;product=mannose-6-phosphate isomerase%2C class I;protein_id=UTX05794.1;transl_table=11 CP101611.1 Genbank pseudogene 661619 664256 . + . ID=gene-NM058_03460;Name=NM058_03460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03460;pseudo=true CP101611.1 Protein Homology CDS 661619 664256 . + 0 ID=cds-NM058_03460;Parent=gene-NM058_03460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391459.1;locus_tag=NM058_03460;product=N-acetylglucosaminidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 664294 666153 . - . ID=gene-NM058_03465;Name=NM058_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03465 CP101611.1 Protein Homology CDS 664294 666153 . - 0 ID=cds-UTX05795.1;Parent=gene-NM058_03465;Dbxref=NCBI_GP:UTX05795.1;Name=UTX05795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010328814.1;locus_tag=NM058_03465;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=UTX05795.1;transl_table=11 CP101611.1 Genbank gene 666172 667341 . - . ID=gene-NM058_03470;Name=NM058_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03470 CP101611.1 Protein Homology CDS 666172 667341 . - 0 ID=cds-UTX05796.1;Parent=gene-NM058_03470;Dbxref=NCBI_GP:UTX05796.1;Name=UTX05796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014665595.1;locus_tag=NM058_03470;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=UTX05796.1;transl_table=11 CP101611.1 Genbank gene 667345 668370 . - . ID=gene-NM058_03475;Name=NM058_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03475 CP101611.1 Protein Homology CDS 667345 668370 . - 0 ID=cds-UTX05797.1;Parent=gene-NM058_03475;Dbxref=NCBI_GP:UTX05797.1;Name=UTX05797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003219623.1;locus_tag=NM058_03475;product=ribitol-5-phosphate dehydrogenase;protein_id=UTX05797.1;transl_table=11 CP101611.1 Genbank gene 668367 669080 . - . ID=gene-NM058_03480;Name=NM058_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03480 CP101611.1 Protein Homology CDS 668367 669080 . - 0 ID=cds-UTX05798.1;Parent=gene-NM058_03480;Dbxref=NCBI_GP:UTX05798.1;Name=UTX05798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010328811.1;locus_tag=NM058_03480;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=UTX05798.1;transl_table=11 CP101611.1 Genbank gene 669169 670320 . - . ID=gene-NM058_03485;Name=NM058_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03485 CP101611.1 Protein Homology CDS 669169 670320 . - 0 ID=cds-UTX05799.1;Parent=gene-NM058_03485;Dbxref=NCBI_GP:UTX05799.1;Name=UTX05799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015483779.1;locus_tag=NM058_03485;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=UTX05799.1;transl_table=11 CP101611.1 Genbank pseudogene 670416 671188 . - . ID=gene-NM058_03490;Name=NM058_03490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03490;pseudo=true CP101611.1 Protein Homology CDS 670416 671188 . - 0 ID=cds-NM058_03490;Parent=gene-NM058_03490;Note=frameshifted;Ontology_term=GO:0043163,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=cell envelope organization|0043163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259633.1;locus_tag=NM058_03490;product=WecB/TagA/CpsF family glycosyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 671652 672041 . + . ID=gene-NM058_03495;Name=tagD;gbkey=Gene;gene=tagD;gene_biotype=protein_coding;locus_tag=NM058_03495 CP101611.1 Protein Homology CDS 671652 672041 . + 0 ID=cds-UTX05800.1;Parent=gene-NM058_03495;Dbxref=NCBI_GP:UTX05800.1;Name=UTX05800.1;Ontology_term=GO:0047348;gbkey=CDS;gene=tagD;go_function=glycerol-3-phosphate cytidylyltransferase activity|0047348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391455.1;locus_tag=NM058_03495;product=glycerol-3-phosphate cytidylyltransferase;protein_id=UTX05800.1;transl_table=11 CP101611.1 Genbank gene 672166 673347 . + . ID=gene-NM058_03500;Name=NM058_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03500 CP101611.1 Protein Homology CDS 672166 673347 . + 0 ID=cds-UTX05801.1;Parent=gene-NM058_03500;Dbxref=NCBI_GP:UTX05801.1;Name=UTX05801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014115389.1;locus_tag=NM058_03500;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=UTX05801.1;transl_table=11 CP101611.1 Genbank gene 673366 674247 . + . ID=gene-NM058_03505;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=NM058_03505 CP101611.1 Protein Homology CDS 673366 674247 . + 0 ID=cds-UTX05802.1;Parent=gene-NM058_03505;Dbxref=NCBI_GP:UTX05802.1;Name=UTX05802.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012011459.1;locus_tag=NM058_03505;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=UTX05802.1;transl_table=11 CP101611.1 Genbank gene 674260 675294 . + . ID=gene-NM058_03510;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=NM058_03510 CP101611.1 Protein Homology CDS 674260 675294 . + 0 ID=cds-UTX05803.1;Parent=gene-NM058_03510;Dbxref=NCBI_GP:UTX05803.1;Name=UTX05803.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016718973.1;locus_tag=NM058_03510;product=dTDP-glucose 4%2C6-dehydratase;protein_id=UTX05803.1;transl_table=11 CP101611.1 Genbank gene 675378 677381 . + . ID=gene-NM058_03515;Name=NM058_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03515 CP101611.1 Protein Homology CDS 675378 677381 . + 0 ID=cds-UTX05804.1;Parent=gene-NM058_03515;Dbxref=NCBI_GP:UTX05804.1;Name=UTX05804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012011457.1;locus_tag=NM058_03515;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=UTX05804.1;transl_table=11 CP101611.1 Genbank gene 677400 678683 . + . ID=gene-NM058_03520;Name=NM058_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03520 CP101611.1 Protein Homology CDS 677400 678683 . + 0 ID=cds-UTX05805.1;Parent=gene-NM058_03520;Dbxref=NCBI_GP:UTX05805.1;Name=UTX05805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016093616.1;locus_tag=NM058_03520;product=ATP-grasp domain-containing protein;protein_id=UTX05805.1;transl_table=11 CP101611.1 Genbank gene 678686 679834 . + . ID=gene-NM058_03525;Name=NM058_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03525 CP101611.1 Protein Homology CDS 678686 679834 . + 0 ID=cds-UTX05806.1;Parent=gene-NM058_03525;Dbxref=NCBI_GP:UTX05806.1;Name=UTX05806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016136071.1;locus_tag=NM058_03525;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=UTX05806.1;transl_table=11 CP101611.1 Genbank gene 679871 680758 . + . ID=gene-NM058_03530;Name=NM058_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03530 CP101611.1 Protein Homology CDS 679871 680758 . + 0 ID=cds-UTX05807.1;Parent=gene-NM058_03530;Dbxref=NCBI_GP:UTX05807.1;Name=UTX05807.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=NM058_03530;product=glycosyltransferase;protein_id=UTX05807.1;transl_table=11 CP101611.1 Genbank gene 680797 681723 . + . ID=gene-NM058_03535;Name=NM058_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03535 CP101611.1 GeneMarkS-2+ CDS 680797 681723 . + 0 ID=cds-UTX05808.1;Parent=gene-NM058_03535;Dbxref=NCBI_GP:UTX05808.1;Name=UTX05808.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_03535;product=hypothetical protein;protein_id=UTX05808.1;transl_table=11 CP101611.1 Genbank gene 681881 682708 . + . ID=gene-NM058_03540;Name=tagG;gbkey=Gene;gene=tagG;gene_biotype=protein_coding;locus_tag=NM058_03540 CP101611.1 Protein Homology CDS 681881 682708 . + 0 ID=cds-UTX05809.1;Parent=gene-NM058_03540;Dbxref=NCBI_GP:UTX05809.1;Name=UTX05809.1;gbkey=CDS;gene=tagG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391452.1;locus_tag=NM058_03540;product=teichoic acids export ABC transporter permease subunit TagG;protein_id=UTX05809.1;transl_table=11 CP101611.1 Genbank gene 682728 684311 . + . ID=gene-NM058_03545;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=NM058_03545 CP101611.1 Protein Homology CDS 682728 684311 . + 0 ID=cds-UTX05810.1;Parent=gene-NM058_03545;Dbxref=NCBI_GP:UTX05810.1;Name=UTX05810.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=tagH;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259629.1;locus_tag=NM058_03545;product=teichoic acids export ABC transporter ATP-binding subunit TagH;protein_id=UTX05810.1;transl_table=11 CP101611.1 Genbank gene 684350 685228 . - . ID=gene-NM058_03550;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=NM058_03550 CP101611.1 Protein Homology CDS 684350 685228 . - 0 ID=cds-UTX05811.1;Parent=gene-NM058_03550;Dbxref=NCBI_GP:UTX05811.1;Name=UTX05811.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391447.1;locus_tag=NM058_03550;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=UTX05811.1;transl_table=11 CP101611.1 Genbank gene 685583 686950 . + . ID=gene-NM058_03555;Name=NM058_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03555 CP101611.1 Protein Homology CDS 685583 686950 . + 0 ID=cds-UTX05812.1;Parent=gene-NM058_03555;Dbxref=NCBI_GP:UTX05812.1;Name=UTX05812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014665582.1;locus_tag=NM058_03555;product=hypothetical protein;protein_id=UTX05812.1;transl_table=11 CP101611.1 Genbank gene 686985 687851 . + . ID=gene-NM058_03560;Name=NM058_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03560 CP101611.1 Protein Homology CDS 686985 687851 . + 0 ID=cds-UTX05813.1;Parent=gene-NM058_03560;Dbxref=NCBI_GP:UTX05813.1;Name=UTX05813.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020877.2;locus_tag=NM058_03560;product=hypothetical protein;protein_id=UTX05813.1;transl_table=11 CP101611.1 Genbank gene 687821 688504 . + . ID=gene-NM058_03565;Name=NM058_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03565 CP101611.1 Protein Homology CDS 687821 688504 . + 0 ID=cds-UTX05814.1;Parent=gene-NM058_03565;Dbxref=NCBI_GP:UTX05814.1;Name=UTX05814.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=NM058_03565;product=glycosyltransferase;protein_id=UTX05814.1;transl_table=11 CP101611.1 Genbank gene 688579 688872 . + . ID=gene-NM058_03570;Name=NM058_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03570 CP101611.1 Protein Homology CDS 688579 688872 . + 0 ID=cds-UTX05815.1;Parent=gene-NM058_03570;Dbxref=NCBI_GP:UTX05815.1;Name=UTX05815.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.2;locus_tag=NM058_03570;product=glycosyltransferase;protein_id=UTX05815.1;transl_table=11 CP101611.1 Genbank gene 688851 690488 . + . ID=gene-NM058_03575;Name=NM058_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03575 CP101611.1 Protein Homology CDS 688851 690488 . + 0 ID=cds-UTX06961.1;Parent=gene-NM058_03575;Dbxref=NCBI_GP:UTX06961.1;Name=UTX06961.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036924.2;locus_tag=NM058_03575;product=glycosyltransferase family 2 protein;protein_id=UTX06961.1;transl_table=11 CP101611.1 Genbank gene 690511 691653 . + . ID=gene-NM058_03580;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=NM058_03580 CP101611.1 Protein Homology CDS 690511 691653 . + 0 ID=cds-UTX05816.1;Parent=gene-NM058_03580;Dbxref=NCBI_GP:UTX05816.1;Name=UTX05816.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391446.1;locus_tag=NM058_03580;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=UTX05816.1;transl_table=11 CP101611.1 Genbank pseudogene 691694 692613 . - . ID=gene-NM058_03585;Name=lytR;gbkey=Gene;gene=lytR;gene_biotype=pseudogene;locus_tag=NM058_03585;pseudo=true CP101611.1 Protein Homology CDS 691694 692613 . - 0 ID=cds-NM058_03585;Parent=gene-NM058_03585;Note=frameshifted;gbkey=CDS;gene=lytR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391445.1;locus_tag=NM058_03585;product=transcription antiterminator LytR;pseudo=true;transl_table=11 CP101611.1 Genbank gene 692826 693149 . + . ID=gene-NM058_03590;Name=NM058_03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03590 CP101611.1 Protein Homology CDS 692826 693149 . + 0 ID=cds-UTX05817.1;Parent=gene-NM058_03590;Dbxref=NCBI_GP:UTX05817.1;Name=UTX05817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010328795.1;locus_tag=NM058_03590;product=hypothetical protein;protein_id=UTX05817.1;transl_table=11 CP101611.1 Genbank pseudogene 693177 695329 . + . ID=gene-NM058_03595;Name=NM058_03595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03595;pseudo=true CP101611.1 Protein Homology CDS 693177 695329 . + 0 ID=cds-NM058_03595;Parent=gene-NM058_03595;Note=frameshifted;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259621.1;locus_tag=NM058_03595;product=SpoIID/LytB domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 695412 696897 . + . ID=gene-NM058_03600;Name=NM058_03600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03600;pseudo=true CP101611.1 Protein Homology CDS 695412 696897 . + 0 ID=cds-NM058_03600;Parent=gene-NM058_03600;Note=frameshifted;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259620.1;locus_tag=NM058_03600;product=N-acetylmuramoyl-L-alanine amidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 697114 699018 . + . ID=gene-NM058_03605;Name=NM058_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03605 CP101611.1 Protein Homology CDS 697114 699018 . + 0 ID=cds-UTX05818.1;Parent=gene-NM058_03605;Dbxref=NCBI_GP:UTX05818.1;Name=UTX05818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003219666.1;locus_tag=NM058_03605;product=glycosyltransferase family 2 protein;protein_id=UTX05818.1;transl_table=11 CP101611.1 Genbank gene 699253 699912 . + . ID=gene-NM058_03610;Name=NM058_03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03610 CP101611.1 Protein Homology CDS 699253 699912 . + 0 ID=cds-UTX05819.1;Parent=gene-NM058_03610;Dbxref=NCBI_GP:UTX05819.1;Name=UTX05819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014478140.1;locus_tag=NM058_03610;product=sugar transferase;protein_id=UTX05819.1;transl_table=11 CP101611.1 Genbank pseudogene 699968 701418 . + . ID=gene-NM058_03615;Name=NM058_03615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03615;pseudo=true CP101611.1 Protein Homology CDS 699968 701418 . + 0 ID=cds-NM058_03615;Parent=gene-NM058_03615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391440.1;locus_tag=NM058_03615;product=MOP flippase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 701415 702583 . + . ID=gene-NM058_03620;Name=NM058_03620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03620;pseudo=true CP101611.1 Protein Homology CDS 701415 702583 . + 0 ID=cds-NM058_03620;Parent=gene-NM058_03620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391439.1;locus_tag=NM058_03620;product=glycosyltransferase family 4 protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 702645 704030 . + . ID=gene-NM058_03625;Name=tuaD;gbkey=Gene;gene=tuaD;gene_biotype=protein_coding;locus_tag=NM058_03625 CP101611.1 Protein Homology CDS 702645 704030 . + 0 ID=cds-UTX05820.1;Parent=gene-NM058_03625;Dbxref=NCBI_GP:UTX05820.1;Name=UTX05820.1;gbkey=CDS;gene=tuaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391438.1;locus_tag=NM058_03625;product=UDP-glucose 6-dehydrogenase TuaD;protein_id=UTX05820.1;transl_table=11 CP101611.1 Genbank gene 704115 705581 . + . ID=gene-NM058_03630;Name=NM058_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03630 CP101611.1 Protein Homology CDS 704115 705581 . + 0 ID=cds-UTX05821.1;Parent=gene-NM058_03630;Dbxref=NCBI_GP:UTX05821.1;Name=UTX05821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391437.1;locus_tag=NM058_03630;product=O-antigen ligase family protein;protein_id=UTX05821.1;transl_table=11 CP101611.1 Genbank gene 705610 706290 . + . ID=gene-NM058_03635;Name=NM058_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03635 CP101611.1 Protein Homology CDS 705610 706290 . + 0 ID=cds-UTX05822.1;Parent=gene-NM058_03635;Dbxref=NCBI_GP:UTX05822.1;Name=UTX05822.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391436.1;locus_tag=NM058_03635;product=Wzz/FepE/Etk N-terminal domain-containing protein;protein_id=UTX05822.1;transl_table=11 CP101611.1 Genbank pseudogene 706314 707071 . + . ID=gene-NM058_03640;Name=NM058_03640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03640;pseudo=true CP101611.1 Protein Homology CDS 706314 707071 . + 0 ID=cds-NM058_03640;Parent=gene-NM058_03640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391435.1;locus_tag=NM058_03640;product=glycosyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 707100 708293 . + . ID=gene-NM058_03645;Name=NM058_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03645 CP101611.1 Protein Homology CDS 707100 708293 . + 0 ID=cds-UTX06962.1;Parent=gene-NM058_03645;Dbxref=NCBI_GP:UTX06962.1;Name=UTX06962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391434.1;locus_tag=NM058_03645;product=glycosyltransferase family 1 protein;protein_id=UTX06962.1;transl_table=11 CP101611.1 Genbank gene 708438 709514 . + . ID=gene-NM058_03650;Name=NM058_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03650 CP101611.1 Protein Homology CDS 708438 709514 . + 0 ID=cds-UTX05823.1;Parent=gene-NM058_03650;Dbxref=NCBI_GP:UTX05823.1;Name=UTX05823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391433.1;locus_tag=NM058_03650;product=undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=UTX05823.1;transl_table=11 CP101611.1 Genbank pseudogene 709585 710741 . - . ID=gene-NM058_03655;Name=NM058_03655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03655;pseudo=true CP101611.1 Protein Homology CDS 709585 710741 . - 0 ID=cds-NM058_03655;Parent=gene-NM058_03655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391432.1;locus_tag=NM058_03655;product=LCP family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 710741 711394 . - . ID=gene-NM058_03660;Name=NM058_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03660 CP101611.1 Protein Homology CDS 710741 711394 . - 0 ID=cds-UTX05824.1;Parent=gene-NM058_03660;Dbxref=NCBI_GP:UTX05824.1;Name=UTX05824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391431.1;locus_tag=NM058_03660;product=YigZ family protein;protein_id=UTX05824.1;transl_table=11 CP101611.1 Genbank pseudogene 711612 712768 . + . ID=gene-NM058_03665;Name=degS;gbkey=Gene;gene=degS;gene_biotype=pseudogene;locus_tag=NM058_03665;pseudo=true CP101611.1 Protein Homology CDS 711612 712768 . + 0 ID=cds-NM058_03665;Parent=gene-NM058_03665;Note=frameshifted;gbkey=CDS;gene=degS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391430.1;locus_tag=NM058_03665;product=two-component sensor histidine kinase DegS;pseudo=true;transl_table=11 CP101611.1 Genbank gene 712851 713540 . + . ID=gene-NM058_03670;Name=degU;gbkey=Gene;gene=degU;gene_biotype=protein_coding;locus_tag=NM058_03670 CP101611.1 Protein Homology CDS 712851 713540 . + 0 ID=cds-UTX05825.1;Parent=gene-NM058_03670;Dbxref=NCBI_GP:UTX05825.1;Name=UTX05825.1;gbkey=CDS;gene=degU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391429.1;locus_tag=NM058_03670;product=two-component system response regulator DegU;protein_id=UTX05825.1;transl_table=11 CP101611.1 Genbank gene 713638 714483 . + . ID=gene-NM058_03675;Name=NM058_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03675 CP101611.1 Protein Homology CDS 713638 714483 . + 0 ID=cds-UTX05826.1;Parent=gene-NM058_03675;Dbxref=NCBI_GP:UTX05826.1;Name=UTX05826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391428.1;locus_tag=NM058_03675;product=DegV family protein;protein_id=UTX05826.1;transl_table=11 CP101611.1 Genbank gene 714591 715973 . + . ID=gene-NM058_03680;Name=NM058_03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03680 CP101611.1 Protein Homology CDS 714591 715973 . + 0 ID=cds-UTX06963.1;Parent=gene-NM058_03680;Dbxref=NCBI_GP:UTX06963.1;Name=UTX06963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014665561.1;locus_tag=NM058_03680;product=DEAD/DEAH box helicase;protein_id=UTX06963.1;transl_table=11 CP101611.1 Genbank gene 716041 716337 . + . ID=gene-NM058_03685;Name=comFB;gbkey=Gene;gene=comFB;gene_biotype=protein_coding;locus_tag=NM058_03685 CP101611.1 Protein Homology CDS 716041 716337 . + 0 ID=cds-UTX05827.1;Parent=gene-NM058_03685;Dbxref=NCBI_GP:UTX05827.1;Name=UTX05827.1;gbkey=CDS;gene=comFB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391426.1;locus_tag=NM058_03685;product=late competence protein ComFB;protein_id=UTX05827.1;transl_table=11 CP101611.1 Genbank gene 716301 717023 . + . ID=gene-NM058_03690;Name=NM058_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03690 CP101611.1 Protein Homology CDS 716301 717023 . + 0 ID=cds-UTX05828.1;Parent=gene-NM058_03690;Dbxref=NCBI_GP:UTX05828.1;Name=UTX05828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391425.2;locus_tag=NM058_03690;product=ComF family protein;protein_id=UTX05828.1;transl_table=11 CP101611.1 Genbank gene 717096 717515 . + . ID=gene-NM058_03695;Name=NM058_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03695 CP101611.1 Protein Homology CDS 717096 717515 . + 0 ID=cds-UTX05829.1;Parent=gene-NM058_03695;Dbxref=NCBI_GP:UTX05829.1;Name=UTX05829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391424.1;locus_tag=NM058_03695;product=hypothetical protein;protein_id=UTX05829.1;transl_table=11 CP101611.1 Genbank gene 717595 717861 . + . ID=gene-NM058_03700;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=NM058_03700 CP101611.1 Protein Homology CDS 717595 717861 . + 0 ID=cds-UTX05830.1;Parent=gene-NM058_03700;Dbxref=NCBI_GP:UTX05830.1;Name=UTX05830.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of transcription%2C DNA-templated|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391423.1;locus_tag=NM058_03700;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=UTX05830.1;transl_table=11 CP101611.1 Genbank gene 717877 718359 . + . ID=gene-NM058_03705;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=NM058_03705 CP101611.1 Protein Homology CDS 717877 718359 . + 0 ID=cds-UTX05831.1;Parent=gene-NM058_03705;Dbxref=NCBI_GP:UTX05831.1;Name=UTX05831.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391422.1;locus_tag=NM058_03705;product=flagellar protein FlgN;protein_id=UTX05831.1;transl_table=11 CP101611.1 Genbank gene 718378 719895 . + . ID=gene-NM058_03710;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=NM058_03710 CP101611.1 Protein Homology CDS 718378 719895 . + 0 ID=cds-UTX05832.1;Parent=gene-NM058_03710;Dbxref=NCBI_GP:UTX05832.1;Name=UTX05832.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391421.1;locus_tag=NM058_03710;product=flagellar hook-associated protein FlgK;protein_id=UTX05832.1;transl_table=11 CP101611.1 Genbank gene 719905 720801 . + . ID=gene-NM058_03715;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=NM058_03715 CP101611.1 Protein Homology CDS 719905 720801 . + 0 ID=cds-UTX05833.1;Parent=gene-NM058_03715;Dbxref=NCBI_GP:UTX05833.1;Name=UTX05833.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391420.1;locus_tag=NM058_03715;product=flagellar hook-associated protein FlgL;protein_id=UTX05833.1;transl_table=11 CP101611.1 Genbank gene 720848 721411 . + . ID=gene-NM058_03720;Name=NM058_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03720 CP101611.1 Protein Homology CDS 720848 721411 . + 0 ID=cds-UTX05834.1;Parent=gene-NM058_03720;Dbxref=NCBI_GP:UTX05834.1;Name=UTX05834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003235445.1;locus_tag=NM058_03720;product=DUF6470 family protein;protein_id=UTX05834.1;transl_table=11 CP101611.1 Genbank gene 721444 721875 . + . ID=gene-NM058_03725;Name=fliW;gbkey=Gene;gene=fliW;gene_biotype=protein_coding;locus_tag=NM058_03725 CP101611.1 Protein Homology CDS 721444 721875 . + 0 ID=cds-UTX05835.1;Parent=gene-NM058_03725;Dbxref=NCBI_GP:UTX05835.1;Name=UTX05835.1;gbkey=CDS;gene=fliW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391418.1;locus_tag=NM058_03725;product=flagellar assembly protein FliW;protein_id=UTX05835.1;transl_table=11 CP101611.1 Genbank gene 721869 722093 . + . ID=gene-NM058_03730;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=NM058_03730 CP101611.1 Protein Homology CDS 721869 722093 . + 0 ID=cds-UTX05836.1;Parent=gene-NM058_03730;Dbxref=NCBI_GP:UTX05836.1;Name=UTX05836.1;Ontology_term=GO:0006109,GO:0003723;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391417.1;locus_tag=NM058_03730;product=carbon storage regulator CsrA;protein_id=UTX05836.1;transl_table=11 CP101611.1 Genbank gene 722239 723060 . + . ID=gene-NM058_03735;Name=hag;gbkey=Gene;gene=hag;gene_biotype=protein_coding;locus_tag=NM058_03735 CP101611.1 Protein Homology CDS 722239 723060 . + 0 ID=cds-UTX05837.1;Parent=gene-NM058_03735;Dbxref=NCBI_GP:UTX05837.1;Name=UTX05837.1;gbkey=CDS;gene=hag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391416.1;locus_tag=NM058_03735;product=flagellin Hag;protein_id=UTX05837.1;transl_table=11 CP101611.1 Genbank gene 723295 723624 . + . ID=gene-NM058_03740;Name=flaG;gbkey=Gene;gene=flaG;gene_biotype=protein_coding;locus_tag=NM058_03740 CP101611.1 Protein Homology CDS 723295 723624 . + 0 ID=cds-UTX05838.1;Parent=gene-NM058_03740;Dbxref=NCBI_GP:UTX05838.1;Name=UTX05838.1;gbkey=CDS;gene=flaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391415.1;locus_tag=NM058_03740;product=flagellar protein FlaG;protein_id=UTX05838.1;transl_table=11 CP101611.1 Genbank gene 723642 725138 . + . ID=gene-NM058_03745;Name=NM058_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03745 CP101611.1 Protein Homology CDS 723642 725138 . + 0 ID=cds-UTX05839.1;Parent=gene-NM058_03745;Dbxref=NCBI_GP:UTX05839.1;Name=UTX05839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391414.1;locus_tag=NM058_03745;product=flagellar hook-associated protein 2;protein_id=UTX05839.1;transl_table=11 CP101611.1 Genbank gene 725160 725561 . + . ID=gene-NM058_03750;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=NM058_03750 CP101611.1 Protein Homology CDS 725160 725561 . + 0 ID=cds-UTX05840.1;Parent=gene-NM058_03750;Dbxref=NCBI_GP:UTX05840.1;Name=UTX05840.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliS;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391413.1;locus_tag=NM058_03750;product=flagellar export chaperone FliS;protein_id=UTX05840.1;transl_table=11 CP101611.1 Genbank gene 725558 725899 . + . ID=gene-NM058_03755;Name=NM058_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03755 CP101611.1 Protein Homology CDS 725558 725899 . + 0 ID=cds-UTX05841.1;Parent=gene-NM058_03755;Dbxref=NCBI_GP:UTX05841.1;Name=UTX05841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391412.1;locus_tag=NM058_03755;product=flagellar protein FliT;protein_id=UTX05841.1;transl_table=11 CP101611.1 Genbank gene 725909 726286 . + . ID=gene-NM058_03760;Name=NM058_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03760 CP101611.1 Protein Homology CDS 725909 726286 . + 0 ID=cds-UTX05842.1;Parent=gene-NM058_03760;Dbxref=NCBI_GP:UTX05842.1;Name=UTX05842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097791.1;locus_tag=NM058_03760;product=hypothetical protein;protein_id=UTX05842.1;transl_table=11 CP101611.1 Genbank gene 726476 727045 . + . ID=gene-NM058_03765;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;gene_synonym=yvyD;locus_tag=NM058_03765 CP101611.1 Protein Homology CDS 726476 727045 . + 0 ID=cds-UTX05843.1;Parent=gene-NM058_03765;Dbxref=NCBI_GP:UTX05843.1;Name=UTX05843.1;gbkey=CDS;gene=hpf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391411.1;locus_tag=NM058_03765;product=ribosome hibernation promotion factor;protein_id=UTX05843.1;transl_table=11 CP101611.1 Genbank pseudogene 727213 729737 . + . ID=gene-NM058_03770;Name=secA;gbkey=Gene;gene=secA;gene_biotype=pseudogene;locus_tag=NM058_03770;pseudo=true CP101611.1 Protein Homology CDS 727213 729737 . + 0 ID=cds-NM058_03770;Parent=gene-NM058_03770;Note=frameshifted;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391410.1;locus_tag=NM058_03770;product=preprotein translocase subunit SecA;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 729806 730906 . + . ID=gene-NM058_03775;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=pseudogene;locus_tag=NM058_03775;pseudo=true CP101611.1 Protein Homology CDS 729806 730906 . + 0 ID=cds-NM058_03775;Parent=gene-NM058_03775;Note=frameshifted;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391409.1;locus_tag=NM058_03775;product=peptide chain release factor 2;pseudo=true;transl_table=11 CP101611.1 Genbank gene 731072 731917 . + . ID=gene-NM058_03780;Name=NM058_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03780 CP101611.1 Protein Homology CDS 731072 731917 . + 0 ID=cds-UTX06964.1;Parent=gene-NM058_03780;Dbxref=NCBI_GP:UTX06964.1;Name=UTX06964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019715868.1;locus_tag=NM058_03780;product=YitT family protein;protein_id=UTX06964.1;transl_table=11 CP101611.1 Genbank gene 731966 732304 . + . ID=gene-NM058_03785;Name=NM058_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03785 CP101611.1 Protein Homology CDS 731966 732304 . + 0 ID=cds-UTX05844.1;Parent=gene-NM058_03785;Dbxref=NCBI_GP:UTX05844.1;Name=UTX05844.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391407.1;locus_tag=NM058_03785;product=c-type cytochrome;protein_id=UTX05844.1;transl_table=11 CP101611.1 Genbank gene 732539 733222 . + . ID=gene-NM058_03790;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=NM058_03790 CP101611.1 Protein Homology CDS 732539 733222 . + 0 ID=cds-UTX05845.1;Parent=gene-NM058_03790;Dbxref=NCBI_GP:UTX05845.1;Name=UTX05845.1;Ontology_term=GO:0000910,GO:0006810,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA,transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391406.1;locus_tag=NM058_03790;product=cell division ATP-binding protein FtsE;protein_id=UTX05845.1;transl_table=11 CP101611.1 Genbank gene 733215 734105 . + . ID=gene-NM058_03795;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=NM058_03795 CP101611.1 Protein Homology CDS 733215 734105 . + 0 ID=cds-UTX05846.1;Parent=gene-NM058_03795;Dbxref=NCBI_GP:UTX05846.1;Name=UTX05846.1;Ontology_term=GO:0016021;gbkey=CDS;gene=ftsX;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391405.1;locus_tag=NM058_03795;product=permease-like cell division protein FtsX;protein_id=UTX05846.1;transl_table=11 CP101611.1 Genbank gene 734244 735686 . + . ID=gene-NM058_03800;Name=ctpB;gbkey=Gene;gene=ctpB;gene_biotype=protein_coding;locus_tag=NM058_03800 CP101611.1 Protein Homology CDS 734244 735686 . + 0 ID=cds-UTX05847.1;Parent=gene-NM058_03800;Dbxref=NCBI_GP:UTX05847.1;Name=UTX05847.1;gbkey=CDS;gene=ctpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391404.1;locus_tag=NM058_03800;product=carboxy-terminal processing protease CtpB;protein_id=UTX05847.1;transl_table=11 CP101611.1 Genbank gene 736070 736423 . + . ID=gene-NM058_03805;Name=swrA;gbkey=Gene;gene=swrA;gene_biotype=protein_coding;locus_tag=NM058_03805 CP101611.1 Protein Homology CDS 736070 736423 . + 0 ID=cds-UTX05848.1;Parent=gene-NM058_03805;Dbxref=NCBI_GP:UTX05848.1;Name=UTX05848.1;gbkey=CDS;gene=swrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015251121.1;locus_tag=NM058_03805;product=swarming motility protein SwrAA;protein_id=UTX05848.1;transl_table=11 CP101611.1 Genbank pseudogene 736502 737697 . + . ID=gene-NM058_03810;Name=NM058_03810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03810;pseudo=true CP101611.1 Protein Homology CDS 736502 737697 . + 0 ID=cds-NM058_03810;Parent=gene-NM058_03810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391402.1;locus_tag=NM058_03810;product=S1C family serine protease;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 737745 739078 . - . ID=gene-NM058_03815;Name=NM058_03815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03815;pseudo=true CP101611.1 Protein Homology CDS 737745 739078 . - 0 ID=cds-NM058_03815;Parent=gene-NM058_03815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391401.1;locus_tag=NM058_03815;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 739109 739678 . - . ID=gene-NM058_03820;Name=NM058_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03820 CP101611.1 Protein Homology CDS 739109 739678 . - 0 ID=cds-UTX05849.1;Parent=gene-NM058_03820;Dbxref=NCBI_GP:UTX05849.1;Name=UTX05849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391400.1;locus_tag=NM058_03820;product=TetR/AcrR family transcriptional regulator;protein_id=UTX05849.1;transl_table=11 CP101611.1 Genbank pseudogene 739755 742251 . - . ID=gene-NM058_03825;Name=NM058_03825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03825;pseudo=true CP101611.1 Protein Homology CDS 739755 742251 . - 0 ID=cds-NM058_03825;Parent=gene-NM058_03825;Note=frameshifted;Ontology_term=GO:0016310,GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391399.1;locus_tag=NM058_03825;product=PEP-utilizing enzyme;pseudo=true;transl_table=11 CP101611.1 Genbank gene 742552 742995 . - . ID=gene-NM058_03830;Name=NM058_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03830 CP101611.1 Protein Homology CDS 742552 742995 . - 0 ID=cds-UTX05850.1;Parent=gene-NM058_03830;Dbxref=NCBI_GP:UTX05850.1;Name=UTX05850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003235424.1;locus_tag=NM058_03830;product=hypothetical protein;protein_id=UTX05850.1;transl_table=11 CP101611.1 Genbank gene 743271 743483 . + . ID=gene-NM058_03835;Name=NM058_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03835 CP101611.1 Protein Homology CDS 743271 743483 . + 0 ID=cds-UTX05851.1;Parent=gene-NM058_03835;Dbxref=NCBI_GP:UTX05851.1;Name=UTX05851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391398.1;locus_tag=NM058_03835;product=CsbA family protein;protein_id=UTX05851.1;transl_table=11 CP101611.1 Genbank gene 743685 745670 . + . ID=gene-NM058_03840;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=NM058_03840 CP101611.1 Protein Homology CDS 743685 745670 . + 0 ID=cds-UTX05852.1;Parent=gene-NM058_03840;Dbxref=NCBI_GP:UTX05852.1;Name=UTX05852.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391397.1;locus_tag=NM058_03840;product=excinuclease ABC subunit UvrB;protein_id=UTX05852.1;transl_table=11 CP101611.1 Genbank pseudogene 745678 748550 . + . ID=gene-NM058_03845;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=pseudogene;locus_tag=NM058_03845;pseudo=true CP101611.1 Protein Homology CDS 745678 748550 . + 0 ID=cds-NM058_03845;Parent=gene-NM058_03845;Note=frameshifted;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391396.1;locus_tag=NM058_03845;product=excinuclease ABC subunit UvrA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 748906 749727 . + . ID=gene-NM058_03850;Name=hag;gbkey=Gene;gene=hag;gene_biotype=protein_coding;locus_tag=NM058_03850 CP101611.1 Protein Homology CDS 748906 749727 . + 0 ID=cds-UTX05853.1;Parent=gene-NM058_03850;Dbxref=NCBI_GP:UTX05853.1;Name=UTX05853.1;gbkey=CDS;gene=hag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391416.1;locus_tag=NM058_03850;product=flagellin Hag;protein_id=UTX05853.1;transl_table=11 CP101611.1 Genbank gene 749908 750138 . - . ID=gene-NM058_03855;Name=NM058_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03855 CP101611.1 Protein Homology CDS 749908 750138 . - 0 ID=cds-UTX05854.1;Parent=gene-NM058_03855;Dbxref=NCBI_GP:UTX05854.1;Name=UTX05854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391394.1;locus_tag=NM058_03855;product=hypothetical protein;protein_id=UTX05854.1;transl_table=11 CP101611.1 Genbank gene 750356 750682 . + . ID=gene-NM058_03860;Name=NM058_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03860 CP101611.1 Protein Homology CDS 750356 750682 . + 0 ID=cds-UTX05855.1;Parent=gene-NM058_03860;Dbxref=NCBI_GP:UTX05855.1;Name=UTX05855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391393.1;locus_tag=NM058_03860;product=hypothetical protein;protein_id=UTX05855.1;transl_table=11 CP101611.1 Genbank gene 750707 751801 . + . ID=gene-NM058_03865;Name=NM058_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03865 CP101611.1 Protein Homology CDS 750707 751801 . + 0 ID=cds-UTX05856.1;Parent=gene-NM058_03865;Dbxref=NCBI_GP:UTX05856.1;Name=UTX05856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391392.1;locus_tag=NM058_03865;product=DUF4097 domain-containing protein;protein_id=UTX05856.1;transl_table=11 CP101611.1 Genbank gene 751806 752003 . + . ID=gene-NM058_03870;Name=NM058_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03870 CP101611.1 Protein Homology CDS 751806 752003 . + 0 ID=cds-UTX05857.1;Parent=gene-NM058_03870;Dbxref=NCBI_GP:UTX05857.1;Name=UTX05857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391391.1;locus_tag=NM058_03870;product=PspC domain-containing protein;protein_id=UTX05857.1;transl_table=11 CP101611.1 Genbank pseudogene 752005 752363 . + . ID=gene-NM058_03875;Name=NM058_03875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03875;pseudo=true CP101611.1 Protein Homology CDS 752005 752363 . + 0 ID=cds-NM058_03875;Parent=gene-NM058_03875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391390.1;locus_tag=NM058_03875;product=phage holin family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 752475 753625 . + . ID=gene-NM058_03880;Name=NM058_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03880 CP101611.1 Protein Homology CDS 752475 752748 . + 0 ID=cds-UTX05858.1;Parent=gene-NM058_03880;Dbxref=NCBI_GP:UTX05858.1;Name=UTX05858.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611387.1;locus_tag=NM058_03880;product=IS3 family transposase;protein_id=UTX05858.1;transl_table=11 CP101611.1 Protein Homology CDS 752748 753625 . + 2 ID=cds-UTX05858.1;Parent=gene-NM058_03880;Dbxref=NCBI_GP:UTX05858.1;Name=UTX05858.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611387.1;locus_tag=NM058_03880;product=IS3 family transposase;protein_id=UTX05858.1;transl_table=11 CP101611.1 Genbank gene 753682 754893 . - . ID=gene-NM058_03885;Name=NM058_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03885 CP101611.1 Protein Homology CDS 753682 754893 . - 0 ID=cds-UTX05859.1;Parent=gene-NM058_03885;Dbxref=NCBI_GP:UTX05859.1;Name=UTX05859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391389.1;locus_tag=NM058_03885;product=MFS transporter;protein_id=UTX05859.1;transl_table=11 CP101611.1 Genbank pseudogene 754915 755423 . - . ID=gene-NM058_03890;Name=pchR;gbkey=Gene;gene=pchR;gene_biotype=pseudogene;locus_tag=NM058_03890;pseudo=true CP101611.1 Protein Homology CDS 754915 755423 . - 0 ID=cds-NM058_03890;Parent=gene-NM058_03890;Note=frameshifted;gbkey=CDS;gene=pchR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391388.1;locus_tag=NM058_03890;product=pulcherriminic acid biosynthesis transcriptional regulator PchR;pseudo=true;transl_table=11 CP101611.1 Genbank gene 755615 759484 . + . ID=gene-NM058_03895;Name=NM058_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03895 CP101611.1 Protein Homology CDS 755615 759484 . + 0 ID=cds-UTX05860.1;Parent=gene-NM058_03895;Dbxref=NCBI_GP:UTX05860.1;Name=UTX05860.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391384.1;locus_tag=NM058_03895;product=metallophosphoesterase;protein_id=UTX05860.1;transl_table=11 CP101611.1 Genbank gene 759503 760234 . - . ID=gene-NM058_03900;Name=nagR;gbkey=Gene;gene=nagR;gene_biotype=protein_coding;gene_synonym=yvoA;locus_tag=NM058_03900 CP101611.1 Protein Homology CDS 759503 760234 . - 0 ID=cds-UTX05861.1;Parent=gene-NM058_03900;Dbxref=NCBI_GP:UTX05861.1;Name=UTX05861.1;gbkey=CDS;gene=nagR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391383.1;locus_tag=NM058_03900;product=transcriptional regulator NagR;protein_id=UTX05861.1;transl_table=11 CP101611.1 Genbank pseudogene 760252 760978 . - . ID=gene-NM058_03905;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=pseudogene;locus_tag=NM058_03905;pseudo=true CP101611.1 Protein Homology CDS 760252 760978 . - 0 ID=cds-NM058_03905;Parent=gene-NM058_03905;Note=frameshifted;Ontology_term=GO:0006046,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine catabolic process|0006046||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391382.1;locus_tag=NM058_03905;product=glucosamine-6-phosphate deaminase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 760975 762164 . - . ID=gene-NM058_03910;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=pseudogene;locus_tag=NM058_03910;pseudo=true CP101611.1 Protein Homology CDS 760975 762164 . - 0 ID=cds-NM058_03910;Parent=gene-NM058_03910;Note=frameshifted;Ontology_term=GO:0006040,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=amino sugar metabolic process|0006040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391381.1;locus_tag=NM058_03910;product=N-acetylglucosamine-6-phosphate deacetylase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 762345 763276 . + . ID=gene-NM058_03915;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=pseudogene;locus_tag=NM058_03915;pseudo=true CP101611.1 Protein Homology CDS 762345 763276 . + 0 ID=cds-NM058_03915;Parent=gene-NM058_03915;Note=frameshifted;Ontology_term=GO:0009401,GO:0004674,GO:0016791;gbkey=CDS;gene=hprK;go_function=protein serine/threonine kinase activity|0004674||IEA,phosphatase activity|0016791||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391380.1;locus_tag=NM058_03915;product=HPr(Ser) kinase/phosphatase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 763290 764099 . + . ID=gene-NM058_03920;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=NM058_03920 CP101611.1 Protein Homology CDS 763290 764099 . + 0 ID=cds-UTX05862.1;Parent=gene-NM058_03920;Dbxref=NCBI_GP:UTX05862.1;Name=UTX05862.1;Ontology_term=GO:0009249,GO:0008961,GO:0016021;gbkey=CDS;gene=lgt;go_component=integral component of membrane|0016021||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391379.1;locus_tag=NM058_03920;product=prolipoprotein diacylglyceryl transferase;protein_id=UTX05862.1;transl_table=11 CP101611.1 Genbank gene 764123 765058 . + . ID=gene-NM058_03925;Name=NM058_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03925 CP101611.1 Protein Homology CDS 764123 765058 . + 0 ID=cds-UTX05863.1;Parent=gene-NM058_03925;Dbxref=NCBI_GP:UTX05863.1;Name=UTX05863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391378.1;locus_tag=NM058_03925;product=nucleoside recognition domain-containing protein;protein_id=UTX05863.1;transl_table=11 CP101611.1 Genbank pseudogene 765055 765704 . + . ID=gene-NM058_03930;Name=ppaX;gbkey=Gene;gene=ppaX;gene_biotype=pseudogene;locus_tag=NM058_03930;pseudo=true CP101611.1 Protein Homology CDS 765055 765704 . + 0 ID=cds-NM058_03930;Parent=gene-NM058_03930;Note=frameshifted;gbkey=CDS;gene=ppaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391377.1;locus_tag=NM058_03930;product=pyrophosphatase PpaX;pseudo=true;transl_table=11 CP101611.1 Genbank gene 765708 766226 . + . ID=gene-NM058_03935;Name=hprF;gbkey=Gene;gene=hprF;gene_biotype=protein_coding;locus_tag=NM058_03935 CP101611.1 Protein Homology CDS 765708 766226 . + 0 ID=cds-UTX05864.1;Parent=gene-NM058_03935;Dbxref=NCBI_GP:UTX05864.1;Name=UTX05864.1;gbkey=CDS;gene=hprF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391376.1;locus_tag=NM058_03935;product=heptaprenylglyceryl phosphate O-acetyltransferase;protein_id=UTX05864.1;transl_table=11 CP101611.1 Genbank gene 766248 766913 . - . ID=gene-NM058_03940;Name=pelC;gbkey=Gene;gene=pelC;gene_biotype=protein_coding;locus_tag=NM058_03940 CP101611.1 Protein Homology CDS 766248 766913 . - 0 ID=cds-UTX05865.1;Parent=gene-NM058_03940;Dbxref=NCBI_GP:UTX05865.1;Name=UTX05865.1;gbkey=CDS;gene=pelC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391375.1;locus_tag=NM058_03940;product=pectate/pectin lyase PelC;protein_id=UTX05865.1;transl_table=11 CP101611.1 Genbank gene 767168 767911 . - . ID=gene-NM058_03945;Name=NM058_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03945 CP101611.1 Protein Homology CDS 767168 767911 . - 0 ID=cds-UTX05866.1;Parent=gene-NM058_03945;Dbxref=NCBI_GP:UTX05866.1;Name=UTX05866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391374.1;locus_tag=NM058_03945;product=C39 family peptidase;protein_id=UTX05866.1;transl_table=11 CP101611.1 Genbank pseudogene 768162 769333 . + . ID=gene-NM058_03950;Name=NM058_03950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03950;pseudo=true CP101611.1 Protein Homology CDS 768162 769333 . + 0 ID=cds-NM058_03950;Parent=gene-NM058_03950;Note=frameshifted;Ontology_term=GO:0000105;gbkey=CDS;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391373.1;locus_tag=NM058_03950;product=ATP phosphoribosyltransferase regulatory subunit;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 769326 769965 . + . ID=gene-NM058_03955;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=pseudogene;locus_tag=NM058_03955;pseudo=true CP101611.1 Protein Homology CDS 769326 769965 . + 0 ID=cds-NM058_03955;Parent=gene-NM058_03955;Note=frameshifted;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391372.1;locus_tag=NM058_03955;product=ATP phosphoribosyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 769962 771244 . + . ID=gene-NM058_03960;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=pseudogene;locus_tag=NM058_03960;pseudo=true CP101611.1 Protein Homology CDS 769962 771244 . + 0 ID=cds-NM058_03960;Parent=gene-NM058_03960;Note=frameshifted;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391371.1;locus_tag=NM058_03960;product=histidinol dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 771241 771825 . + . ID=gene-NM058_03965;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=NM058_03965 CP101611.1 Protein Homology CDS 771241 771825 . + 0 ID=cds-UTX05867.1;Parent=gene-NM058_03965;Dbxref=NCBI_GP:UTX05867.1;Name=UTX05867.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391370.1;locus_tag=NM058_03965;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=UTX05867.1;transl_table=11 CP101611.1 Genbank pseudogene 771826 772463 . + . ID=gene-NM058_03970;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=pseudogene;locus_tag=NM058_03970;pseudo=true CP101611.1 Protein Homology CDS 771826 772463 . + 0 ID=cds-NM058_03970;Parent=gene-NM058_03970;Note=frameshifted;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391369.1;locus_tag=NM058_03970;product=imidazole glycerol phosphate synthase subunit HisH;pseudo=true;transl_table=11 CP101611.1 Genbank gene 772460 773197 . + . ID=gene-NM058_03975;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=NM058_03975 CP101611.1 Protein Homology CDS 772460 773197 . + 0 ID=cds-UTX05868.1;Parent=gene-NM058_03975;Dbxref=NCBI_GP:UTX05868.1;Name=UTX05868.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391368.1;locus_tag=NM058_03975;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=UTX05868.1;transl_table=11 CP101611.1 Genbank gene 773194 773952 . + . ID=gene-NM058_03980;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=NM058_03980 CP101611.1 Protein Homology CDS 773194 773952 . + 0 ID=cds-UTX05869.1;Parent=gene-NM058_03980;Dbxref=NCBI_GP:UTX05869.1;Name=UTX05869.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391367.1;locus_tag=NM058_03980;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=UTX05869.1;transl_table=11 CP101611.1 Genbank gene 773949 774572 . + . ID=gene-NM058_03985;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=NM058_03985 CP101611.1 Protein Homology CDS 773949 774572 . + 0 ID=cds-UTX05870.1;Parent=gene-NM058_03985;Dbxref=NCBI_GP:UTX05870.1;Name=UTX05870.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003219809.1;locus_tag=NM058_03985;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=UTX05870.1;transl_table=11 CP101611.1 Genbank gene 774828 775553 . + . ID=gene-NM058_03990;Name=NM058_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_03990 CP101611.1 Protein Homology CDS 774828 775553 . + 0 ID=cds-UTX05871.1;Parent=gene-NM058_03990;Dbxref=NCBI_GP:UTX05871.1;Name=UTX05871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391365.1;locus_tag=NM058_03990;product=lipoprotein YvcA;protein_id=UTX05871.1;transl_table=11 CP101611.1 Genbank pseudogene 775555 777170 . + . ID=gene-NM058_03995;Name=NM058_03995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_03995;pseudo=true CP101611.1 Protein Homology CDS 775555 777170 . + 0 ID=cds-NM058_03995;Parent=gene-NM058_03995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010332007.1;locus_tag=NM058_03995;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 777185 777544 . + . ID=gene-NM058_04000;Name=NM058_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04000 CP101611.1 Protein Homology CDS 777185 777544 . + 0 ID=cds-UTX05872.1;Parent=gene-NM058_04000;Dbxref=NCBI_GP:UTX05872.1;Name=UTX05872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003235381.1;locus_tag=NM058_04000;product=hypothetical protein;protein_id=UTX05872.1;transl_table=11 CP101611.1 Genbank gene 777710 779479 . + . ID=gene-NM058_04005;Name=bmrA;gbkey=Gene;gene=bmrA;gene_biotype=protein_coding;locus_tag=NM058_04005 CP101611.1 Protein Homology CDS 777710 779479 . + 0 ID=cds-UTX05873.1;Parent=gene-NM058_04005;Dbxref=NCBI_GP:UTX05873.1;Name=UTX05873.1;gbkey=CDS;gene=bmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391362.1;locus_tag=NM058_04005;product=multidrug resistance ABC transporter ATP-binding protein/permease BmrA;protein_id=UTX05873.1;transl_table=11 CP101611.1 Genbank gene 779604 781058 . + . ID=gene-NM058_04010;Name=NM058_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04010 CP101611.1 Protein Homology CDS 779604 781058 . + 0 ID=cds-UTX05874.1;Parent=gene-NM058_04010;Dbxref=NCBI_GP:UTX05874.1;Name=UTX05874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391361.1;locus_tag=NM058_04010;product=tetratricopeptide repeat protein;protein_id=UTX05874.1;transl_table=11 CP101611.1 Genbank gene 781438 782850 . + . ID=gene-NM058_04015;Name=cwlO;gbkey=Gene;gene=cwlO;gene_biotype=protein_coding;locus_tag=NM058_04015 CP101611.1 Protein Homology CDS 781438 782850 . + 0 ID=cds-UTX05875.1;Parent=gene-NM058_04015;Dbxref=NCBI_GP:UTX05875.1;Name=UTX05875.1;gbkey=CDS;gene=cwlO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391360.1;locus_tag=NM058_04015;product=peptidoglycan DL-endopeptidase CwlO;protein_id=UTX05875.1;transl_table=11 CP101611.1 Genbank gene 783069 784019 . + . ID=gene-NM058_04020;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=NM058_04020 CP101611.1 Protein Homology CDS 783069 784019 . + 0 ID=cds-UTX05876.1;Parent=gene-NM058_04020;Dbxref=NCBI_GP:UTX05876.1;Name=UTX05876.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391359.1;locus_tag=NM058_04020;product=thioredoxin-disulfide reductase;protein_id=UTX05876.1;transl_table=11 CP101611.1 Genbank gene 784340 784816 . + . ID=gene-NM058_04025;Name=NM058_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04025 CP101611.1 Protein Homology CDS 784340 784816 . + 0 ID=cds-UTX05877.1;Parent=gene-NM058_04025;Dbxref=NCBI_GP:UTX05877.1;Name=UTX05877.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391358.1;locus_tag=NM058_04025;product=NUDIX domain-containing protein;protein_id=UTX05877.1;transl_table=11 CP101611.1 Genbank gene 784840 785727 . + . ID=gene-NM058_04030;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=NM058_04030 CP101611.1 Protein Homology CDS 784840 785727 . + 0 ID=cds-UTX05878.1;Parent=gene-NM058_04030;Dbxref=NCBI_GP:UTX05878.1;Name=UTX05878.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391357.1;locus_tag=NM058_04030;product=RNase adapter RapZ;protein_id=UTX05878.1;transl_table=11 CP101611.1 Genbank gene 785729 786682 . + . ID=gene-NM058_04035;Name=mgfK;gbkey=Gene;gene=mgfK;gene_biotype=protein_coding;locus_tag=NM058_04035 CP101611.1 Protein Homology CDS 785729 786682 . + 0 ID=cds-UTX05879.1;Parent=gene-NM058_04035;Dbxref=NCBI_GP:UTX05879.1;Name=UTX05879.1;gbkey=CDS;gene=mgfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391356.2;locus_tag=NM058_04035;product=gluconeogenesis morphogenetic factor;protein_id=UTX05879.1;transl_table=11 CP101611.1 Genbank pseudogene 786706 787653 . + . ID=gene-NM058_04040;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=pseudogene;locus_tag=NM058_04040;pseudo=true CP101611.1 Protein Homology CDS 786706 787653 . + 0 ID=cds-NM058_04040;Parent=gene-NM058_04040;Note=frameshifted;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391355.1;locus_tag=NM058_04040;product=DNA-binding protein WhiA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 787677 787934 . + . ID=gene-NM058_04045;Name=NM058_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04045 CP101611.1 Protein Homology CDS 787677 787934 . + 0 ID=cds-UTX05880.1;Parent=gene-NM058_04045;Dbxref=NCBI_GP:UTX05880.1;Name=UTX05880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391354.1;locus_tag=NM058_04045;product=HPr family phosphocarrier protein;protein_id=UTX05880.1;transl_table=11 CP101611.1 Genbank gene 787935 788699 . + . ID=gene-NM058_04050;Name=NM058_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04050 CP101611.1 Protein Homology CDS 787935 788699 . + 0 ID=cds-UTX05881.1;Parent=gene-NM058_04050;Dbxref=NCBI_GP:UTX05881.1;Name=UTX05881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391353.1;locus_tag=NM058_04050;product=arylamine N-acetyltransferase;protein_id=UTX05881.1;transl_table=11 CP101611.1 Genbank gene 788735 788944 . - . ID=gene-NM058_04055;Name=NM058_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04055 CP101611.1 Protein Homology CDS 788735 788944 . - 0 ID=cds-UTX05882.1;Parent=gene-NM058_04055;Dbxref=NCBI_GP:UTX05882.1;Name=UTX05882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097790.1;locus_tag=NM058_04055;product=hypothetical protein;protein_id=UTX05882.1;transl_table=11 CP101611.1 Genbank gene 789089 789802 . + . ID=gene-NM058_04060;Name=psdR;gbkey=Gene;gene=psdR;gene_biotype=protein_coding;gene_synonym=yvcP;locus_tag=NM058_04060 CP101611.1 Protein Homology CDS 789089 789802 . + 0 ID=cds-UTX05883.1;Parent=gene-NM058_04060;Dbxref=NCBI_GP:UTX05883.1;Name=UTX05883.1;gbkey=CDS;gene=psdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391352.1;locus_tag=NM058_04060;product=two-component system response regulator PsdR;protein_id=UTX05883.1;transl_table=11 CP101611.1 Genbank gene 789796 790866 . + . ID=gene-NM058_04065;Name=NM058_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04065 CP101611.1 Protein Homology CDS 789796 790866 . + 0 ID=cds-UTX05884.1;Parent=gene-NM058_04065;Dbxref=NCBI_GP:UTX05884.1;Name=UTX05884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391351.1;locus_tag=NM058_04065;product=HAMP domain-containing histidine kinase;protein_id=UTX05884.1;transl_table=11 CP101611.1 Genbank pseudogene 790949 791727 . + . ID=gene-NM058_04070;Name=psdA;gbkey=Gene;gene=psdA;gene_biotype=pseudogene;gene_synonym=yvcR;locus_tag=NM058_04070;pseudo=true CP101611.1 Protein Homology CDS 790949 791727 . + 0 ID=cds-NM058_04070;Parent=gene-NM058_04070;Note=frameshifted;gbkey=CDS;gene=psdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391350.1;locus_tag=NM058_04070;product=lantibiotic ABC transporter ATP-binding protein PsdA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 791702 793642 . + . ID=gene-NM058_04075;Name=psdB;gbkey=Gene;gene=psdB;gene_biotype=protein_coding;gene_synonym=yvcS;locus_tag=NM058_04075 CP101611.1 Protein Homology CDS 791702 793642 . + 0 ID=cds-UTX05885.1;Parent=gene-NM058_04075;Dbxref=NCBI_GP:UTX05885.1;Name=UTX05885.1;gbkey=CDS;gene=psdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391349.1;locus_tag=NM058_04075;product=lantibiotic ABC transporter permease PsdB;protein_id=UTX05885.1;transl_table=11 CP101611.1 Genbank pseudogene 793679 794655 . - . ID=gene-NM058_04080;Name=NM058_04080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04080;pseudo=true CP101611.1 Protein Homology CDS 793679 794655 . - 0 ID=cds-NM058_04080;Parent=gene-NM058_04080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391348.1;locus_tag=NM058_04080;product=D-glycerate dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 795049 795642 . + . ID=gene-NM058_04085;Name=NM058_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04085 CP101611.1 Protein Homology CDS 795049 795642 . + 0 ID=cds-UTX05886.1;Parent=gene-NM058_04085;Dbxref=NCBI_GP:UTX05886.1;Name=UTX05886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014665483.1;locus_tag=NM058_04085;product=carbonic anhydrase;protein_id=UTX05886.1;transl_table=11 CP101611.1 Genbank gene 795661 797262 . + . ID=gene-NM058_04090;Name=NM058_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04090 CP101611.1 Protein Homology CDS 795661 797262 . + 0 ID=cds-UTX05887.1;Parent=gene-NM058_04090;Dbxref=NCBI_GP:UTX05887.1;Name=UTX05887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391346.1;locus_tag=NM058_04090;product=SulP family inorganic anion transporter;protein_id=UTX05887.1;transl_table=11 CP101611.1 Genbank pseudogene 797290 797609 . - . ID=gene-NM058_04095;Name=NM058_04095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04095;pseudo=true CP101611.1 Protein Homology CDS 797290 797609 . - 0 ID=cds-NM058_04095;Parent=gene-NM058_04095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391345.1;locus_tag=NM058_04095;product=MazG-like family protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 797727 798301 . + . ID=gene-NM058_04100;Name=NM058_04100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04100;pseudo=true CP101611.1 Protein Homology CDS 797727 798301 . + 0 ID=cds-NM058_04100;Parent=gene-NM058_04100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391344.1;locus_tag=NM058_04100;product=TIGR00730 family Rossman fold protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 798555 799505 . + . ID=gene-NM058_04105;Name=NM058_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04105 CP101611.1 Protein Homology CDS 798555 799505 . + 0 ID=cds-UTX05888.1;Parent=gene-NM058_04105;Dbxref=NCBI_GP:UTX05888.1;Name=UTX05888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391343.1;locus_tag=NM058_04105;product=LacI family DNA-binding transcriptional regulator;protein_id=UTX05888.1;transl_table=11 CP101611.1 Genbank pseudogene 799618 801386 . + . ID=gene-NM058_04110;Name=NM058_04110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04110;pseudo=true CP101611.1 Protein Homology CDS 799618 801386 . + 0 ID=cds-NM058_04110;Parent=gene-NM058_04110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391342.1;locus_tag=NM058_04110;product=glycoside hydrolase family 13 protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 801481 802734 . + . ID=gene-NM058_04115;Name=mdxE;gbkey=Gene;gene=mdxE;gene_biotype=protein_coding;locus_tag=NM058_04115 CP101611.1 Protein Homology CDS 801481 802734 . + 0 ID=cds-UTX05889.1;Parent=gene-NM058_04115;Dbxref=NCBI_GP:UTX05889.1;Name=UTX05889.1;gbkey=CDS;gene=mdxE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391341.1;locus_tag=NM058_04115;product=maltodextrin ABC transporter substrate-binding protein MdxE;protein_id=UTX05889.1;transl_table=11 CP101611.1 Genbank gene 802770 804077 . + . ID=gene-NM058_04120;Name=mdxF;gbkey=Gene;gene=mdxF;gene_biotype=protein_coding;locus_tag=NM058_04120 CP101611.1 Protein Homology CDS 802770 804077 . + 0 ID=cds-UTX05890.1;Parent=gene-NM058_04120;Dbxref=NCBI_GP:UTX05890.1;Name=UTX05890.1;gbkey=CDS;gene=mdxF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391340.1;locus_tag=NM058_04120;product=maltodextrin ABC transporter permease MdxF;protein_id=UTX05890.1;transl_table=11 CP101611.1 Genbank gene 804078 804911 . + . ID=gene-NM058_04125;Name=mdxG;gbkey=Gene;gene=mdxG;gene_biotype=protein_coding;locus_tag=NM058_04125 CP101611.1 Protein Homology CDS 804078 804911 . + 0 ID=cds-UTX05891.1;Parent=gene-NM058_04125;Dbxref=NCBI_GP:UTX05891.1;Name=UTX05891.1;gbkey=CDS;gene=mdxG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391339.1;locus_tag=NM058_04125;product=maltodextrin ABC transporter permease MdxG;protein_id=UTX05891.1;transl_table=11 CP101611.1 Genbank pseudogene 804916 805800 . + . ID=gene-NM058_04130;Name=NM058_04130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04130;pseudo=true CP101611.1 Protein Homology CDS 804916 805800 . + 0 ID=cds-NM058_04130;Parent=gene-NM058_04130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391338.1;locus_tag=NM058_04130;product=DUF1189 family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 805778 808051 . + . ID=gene-NM058_04135;Name=NM058_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04135 CP101611.1 Protein Homology CDS 805778 808051 . + 0 ID=cds-UTX05892.1;Parent=gene-NM058_04135;Dbxref=NCBI_GP:UTX05892.1;Name=UTX05892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391337.1;locus_tag=NM058_04135;product=glycoside hydrolase family 65 protein;protein_id=UTX05892.1;transl_table=11 CP101611.1 Genbank pseudogene 808044 809728 . + . ID=gene-NM058_04140;Name=NM058_04140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04140;pseudo=true CP101611.1 Protein Homology CDS 808044 809728 . + 0 ID=cds-NM058_04140;Parent=gene-NM058_04140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391336.1;locus_tag=NM058_04140;product=alpha-glucosidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 809725 810399 . + . ID=gene-NM058_04145;Name=pgmB;gbkey=Gene;gene=pgmB;gene_biotype=protein_coding;locus_tag=NM058_04145 CP101611.1 Protein Homology CDS 809725 810399 . + 0 ID=cds-UTX05893.1;Parent=gene-NM058_04145;Dbxref=NCBI_GP:UTX05893.1;Name=UTX05893.1;Ontology_term=GO:0046352,GO:0008801;gbkey=CDS;gene=pgmB;go_function=beta-phosphoglucomutase activity|0008801||IEA;go_process=disaccharide catabolic process|0046352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003235328.1;locus_tag=NM058_04145;product=beta-phosphoglucomutase;protein_id=UTX05893.1;transl_table=11 CP101611.1 Genbank gene 810472 811068 . - . ID=gene-NM058_04150;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=NM058_04150 CP101611.1 Protein Homology CDS 810472 811068 . - 0 ID=cds-UTX05894.1;Parent=gene-NM058_04150;Dbxref=NCBI_GP:UTX05894.1;Name=UTX05894.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391334.1;locus_tag=NM058_04150;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=UTX05894.1;transl_table=11 CP101611.1 Genbank gene 811339 811414 . + . ID=gene-NM058_04155;Name=NM058_04155;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_04155 CP101611.1 tRNAscan-SE tRNA 811339 811414 . + . ID=rna-NM058_04155;Parent=gene-NM058_04155;anticodon=(pos:811373..811375);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_04155;product=tRNA-Arg CP101611.1 tRNAscan-SE exon 811339 811414 . + . ID=exon-NM058_04155-1;Parent=rna-NM058_04155;anticodon=(pos:811373..811375);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_04155;product=tRNA-Arg CP101611.1 Genbank gene 811569 812081 . + . ID=gene-NM058_04160;Name=NM058_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04160 CP101611.1 Protein Homology CDS 811569 812081 . + 0 ID=cds-UTX05895.1;Parent=gene-NM058_04160;Dbxref=NCBI_GP:UTX05895.1;Name=UTX05895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391331.1;locus_tag=NM058_04160;product=DUF3231 family protein;protein_id=UTX05895.1;transl_table=11 CP101611.1 Genbank gene 812123 812437 . - . ID=gene-NM058_04165;Name=NM058_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04165 CP101611.1 Protein Homology CDS 812123 812437 . - 0 ID=cds-UTX05896.1;Parent=gene-NM058_04165;Dbxref=NCBI_GP:UTX05896.1;Name=UTX05896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003219853.1;locus_tag=NM058_04165;product=multidrug efflux SMR transporter;protein_id=UTX05896.1;transl_table=11 CP101611.1 Genbank gene 812437 812772 . - . ID=gene-NM058_04170;Name=NM058_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04170 CP101611.1 Protein Homology CDS 812437 812772 . - 0 ID=cds-UTX05897.1;Parent=gene-NM058_04170;Dbxref=NCBI_GP:UTX05897.1;Name=UTX05897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391329.1;locus_tag=NM058_04170;product=multidrug efflux SMR transporter;protein_id=UTX05897.1;transl_table=11 CP101611.1 Genbank gene 812854 813438 . - . ID=gene-NM058_04175;Name=NM058_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04175 CP101611.1 Protein Homology CDS 812854 813438 . - 0 ID=cds-UTX05898.1;Parent=gene-NM058_04175;Dbxref=NCBI_GP:UTX05898.1;Name=UTX05898.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259543.1;locus_tag=NM058_04175;product=TetR family transcriptional regulator;protein_id=UTX05898.1;transl_table=11 CP101611.1 Genbank gene 813533 815095 . - . ID=gene-NM058_04180;Name=aspP;gbkey=Gene;gene=aspP;gene_biotype=protein_coding;gene_synonym=yveA;locus_tag=NM058_04180 CP101611.1 Protein Homology CDS 813533 815095 . - 0 ID=cds-UTX05899.1;Parent=gene-NM058_04180;Dbxref=NCBI_GP:UTX05899.1;Name=UTX05899.1;gbkey=CDS;gene=aspP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391327.1;locus_tag=NM058_04180;product=aspartate/proton symporter AspP;protein_id=UTX05899.1;transl_table=11 CP101611.1 Genbank gene 815203 816753 . - . ID=gene-NM058_04185;Name=NM058_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04185 CP101611.1 Protein Homology CDS 815203 816753 . - 0 ID=cds-UTX05900.1;Parent=gene-NM058_04185;Dbxref=NCBI_GP:UTX05900.1;Name=UTX05900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391326.1;locus_tag=NM058_04185;product=glycoside hydrolase family 32 protein;protein_id=UTX05900.1;transl_table=11 CP101611.1 Genbank gene 816830 818251 . - . ID=gene-NM058_04190;Name=sacB;gbkey=Gene;gene=sacB;gene_biotype=protein_coding;locus_tag=NM058_04190 CP101611.1 Protein Homology CDS 816830 818251 . - 0 ID=cds-UTX05901.1;Parent=gene-NM058_04190;Dbxref=NCBI_GP:UTX05901.1;Name=UTX05901.1;gbkey=CDS;gene=sacB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391325.1;locus_tag=NM058_04190;product=levansucrase;protein_id=UTX05901.1;transl_table=11 CP101611.1 Genbank gene 819022 819405 . + . ID=gene-NM058_04195;Name=NM058_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04195 CP101611.1 Protein Homology CDS 819022 819405 . + 0 ID=cds-UTX05902.1;Parent=gene-NM058_04195;Dbxref=NCBI_GP:UTX05902.1;Name=UTX05902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014115252.1;locus_tag=NM058_04195;product=hypothetical protein;protein_id=UTX05902.1;transl_table=11 CP101611.1 Genbank gene 819552 820907 . + . ID=gene-NM058_04200;Name=NM058_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04200 CP101611.1 Protein Homology CDS 819552 820907 . + 0 ID=cds-UTX05903.1;Parent=gene-NM058_04200;Dbxref=NCBI_GP:UTX05903.1;Name=UTX05903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011197791.1;locus_tag=NM058_04200;product=serine hydrolase;protein_id=UTX05903.1;transl_table=11 CP101611.1 Genbank gene 820923 821606 . + . ID=gene-NM058_04205;Name=NM058_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04205 CP101611.1 Protein Homology CDS 820923 821606 . + 0 ID=cds-UTX05904.1;Parent=gene-NM058_04205;Dbxref=NCBI_GP:UTX05904.1;Name=UTX05904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391323.1;locus_tag=NM058_04205;product=aspartate/glutamate racemase family protein;protein_id=UTX05904.1;transl_table=11 CP101611.1 Genbank gene 821730 822185 . + . ID=gene-NM058_04210;Name=NM058_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04210 CP101611.1 Protein Homology CDS 821730 822185 . + 0 ID=cds-UTX05905.1;Parent=gene-NM058_04210;Dbxref=NCBI_GP:UTX05905.1;Name=UTX05905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003235306.1;locus_tag=NM058_04210;product=DUF3237 domain-containing protein;protein_id=UTX05905.1;transl_table=11 CP101611.1 Genbank gene 822207 822692 . + . ID=gene-NM058_04215;Name=padC;gbkey=Gene;gene=padC;gene_biotype=protein_coding;locus_tag=NM058_04215 CP101611.1 Protein Homology CDS 822207 822692 . + 0 ID=cds-UTX05906.1;Parent=gene-NM058_04215;Dbxref=NCBI_GP:UTX05906.1;Name=UTX05906.1;gbkey=CDS;gene=padC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391320.1;locus_tag=NM058_04215;product=phenolic acid decarboxylase;protein_id=UTX05906.1;transl_table=11 CP101611.1 Genbank gene 822718 822909 . - . ID=gene-NM058_04220;Name=NM058_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04220 CP101611.1 Protein Homology CDS 822718 822909 . - 0 ID=cds-UTX05907.1;Parent=gene-NM058_04220;Dbxref=NCBI_GP:UTX05907.1;Name=UTX05907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009514003.1;locus_tag=NM058_04220;product=hypothetical protein;protein_id=UTX05907.1;transl_table=11 CP101611.1 Genbank pseudogene 822912 824378 . - . ID=gene-NM058_04225;Name=NM058_04225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04225;pseudo=true CP101611.1 Protein Homology CDS 822912 824378 . - 0 ID=cds-NM058_04225;Parent=gene-NM058_04225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391319.1;locus_tag=NM058_04225;product=carboxylesterase/lipase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 824452 824910 . - . ID=gene-NM058_04230;Name=slrR;gbkey=Gene;gene=slrR;gene_biotype=protein_coding;locus_tag=NM058_04230 CP101611.1 Protein Homology CDS 824452 824910 . - 0 ID=cds-UTX05908.1;Parent=gene-NM058_04230;Dbxref=NCBI_GP:UTX05908.1;Name=UTX05908.1;gbkey=CDS;gene=slrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391318.1;locus_tag=NM058_04230;product=transcriptional regulator SlrR;protein_id=UTX05908.1;transl_table=11 CP101611.1 Genbank pseudogene 825142 825845 . + . ID=gene-NM058_04235;Name=NM058_04235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04235;pseudo=true CP101611.1 Protein Homology CDS 825142 825845 . + 0 ID=cds-NM058_04235;Parent=gene-NM058_04235;Note=frameshifted;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391317.1;locus_tag=NM058_04235;product=Wzz/FepE/Etk N-terminal domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 825851 826530 . + . ID=gene-NM058_04240;Name=epsB;gbkey=Gene;gene=epsB;gene_biotype=pseudogene;locus_tag=NM058_04240;pseudo=true CP101611.1 Protein Homology CDS 825851 826530 . + 0 ID=cds-NM058_04240;Parent=gene-NM058_04240;Note=frameshifted;gbkey=CDS;gene=epsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391316.1;locus_tag=NM058_04240;product=protein tyrosine kinase EpsB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 826765 828585 . + . ID=gene-NM058_04245;Name=NM058_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04245 CP101611.1 Protein Homology CDS 826765 828585 . + 0 ID=cds-UTX05909.1;Parent=gene-NM058_04245;Dbxref=NCBI_GP:UTX05909.1;Name=UTX05909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017695200.1;locus_tag=NM058_04245;product=polysaccharide biosynthesis protein;protein_id=UTX05909.1;transl_table=11 CP101611.1 Genbank gene 828597 829736 . + . ID=gene-NM058_04250;Name=NM058_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04250 CP101611.1 Protein Homology CDS 828597 829736 . + 0 ID=cds-UTX05910.1;Parent=gene-NM058_04250;Dbxref=NCBI_GP:UTX05910.1;Name=UTX05910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391314.1;locus_tag=NM058_04250;product=glycosyltransferase family 4 protein;protein_id=UTX05910.1;transl_table=11 CP101611.1 Genbank gene 829733 830569 . + . ID=gene-NM058_04255;Name=epsE;gbkey=Gene;gene=epsE;gene_biotype=protein_coding;locus_tag=NM058_04255 CP101611.1 Protein Homology CDS 829733 830569 . + 0 ID=cds-UTX05911.1;Parent=gene-NM058_04255;Dbxref=NCBI_GP:UTX05911.1;Name=UTX05911.1;gbkey=CDS;gene=epsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391313.2;locus_tag=NM058_04255;product=glycosyltransferase EpsE;protein_id=UTX05911.1;transl_table=11 CP101611.1 Genbank gene 830562 831710 . + . ID=gene-NM058_04260;Name=NM058_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04260 CP101611.1 Protein Homology CDS 830562 831710 . + 0 ID=cds-UTX05912.1;Parent=gene-NM058_04260;Dbxref=NCBI_GP:UTX05912.1;Name=UTX05912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259526.1;locus_tag=NM058_04260;product=glycosyltransferase family 1 protein;protein_id=UTX05912.1;transl_table=11 CP101611.1 Genbank gene 831714 832817 . + . ID=gene-NM058_04265;Name=epsG;gbkey=Gene;gene=epsG;gene_biotype=protein_coding;locus_tag=NM058_04265 CP101611.1 Protein Homology CDS 831714 832817 . + 0 ID=cds-UTX05913.1;Parent=gene-NM058_04265;Dbxref=NCBI_GP:UTX05913.1;Name=UTX05913.1;gbkey=CDS;gene=epsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391311.1;locus_tag=NM058_04265;product=biofilm exopolysaccharide biosynthesis protein EpsG;protein_id=UTX05913.1;transl_table=11 CP101611.1 Genbank gene 832842 833876 . + . ID=gene-NM058_04270;Name=NM058_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04270 CP101611.1 Protein Homology CDS 832842 833876 . + 0 ID=cds-UTX05914.1;Parent=gene-NM058_04270;Dbxref=NCBI_GP:UTX05914.1;Name=UTX05914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391310.1;locus_tag=NM058_04270;product=glycosyltransferase;protein_id=UTX05914.1;transl_table=11 CP101611.1 Genbank gene 833881 834957 . + . ID=gene-NM058_04275;Name=NM058_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04275 CP101611.1 Protein Homology CDS 833881 834957 . + 0 ID=cds-UTX05915.1;Parent=gene-NM058_04275;Dbxref=NCBI_GP:UTX05915.1;Name=UTX05915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391309.1;locus_tag=NM058_04275;product=polysaccharide pyruvyl transferase family protein;protein_id=UTX05915.1;transl_table=11 CP101611.1 Genbank pseudogene 834954 835987 . + . ID=gene-NM058_04280;Name=NM058_04280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04280;pseudo=true CP101611.1 Protein Homology CDS 834954 835987 . + 0 ID=cds-NM058_04280;Parent=gene-NM058_04280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391308.1;locus_tag=NM058_04280;product=glycosyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 835984 837496 . + . ID=gene-NM058_04285;Name=NM058_04285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04285;pseudo=true CP101611.1 Protein Homology CDS 835984 837496 . + 0 ID=cds-NM058_04285;Parent=gene-NM058_04285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097789.1;locus_tag=NM058_04285;product=MATE family efflux transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 837493 838101 . + . ID=gene-NM058_04290;Name=NM058_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04290 CP101611.1 Protein Homology CDS 837493 838101 . + 0 ID=cds-UTX05916.1;Parent=gene-NM058_04290;Dbxref=NCBI_GP:UTX05916.1;Name=UTX05916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391305.1;locus_tag=NM058_04290;product=sugar transferase;protein_id=UTX05916.1;transl_table=11 CP101611.1 Genbank gene 838098 838736 . + . ID=gene-NM058_04295;Name=NM058_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04295 CP101611.1 Protein Homology CDS 838098 838736 . + 0 ID=cds-UTX05917.1;Parent=gene-NM058_04295;Dbxref=NCBI_GP:UTX05917.1;Name=UTX05917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003219900.1;locus_tag=NM058_04295;product=acetyltransferase;protein_id=UTX05917.1;transl_table=11 CP101611.1 Genbank pseudogene 838753 839918 . + . ID=gene-NM058_04300;Name=NM058_04300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04300;pseudo=true CP101611.1 Protein Homology CDS 838753 839918 . + 0 ID=cds-NM058_04300;Parent=gene-NM058_04300;Note=frameshifted;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391303.2;locus_tag=NM058_04300;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 CP101611.1 Genbank gene 839897 840865 . + . ID=gene-NM058_04305;Name=NM058_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04305 CP101611.1 Protein Homology CDS 839897 840865 . + 0 ID=cds-UTX05918.1;Parent=gene-NM058_04305;Dbxref=NCBI_GP:UTX05918.1;Name=UTX05918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391302.1;locus_tag=NM058_04305;product=polysaccharide pyruvyl transferase family protein;protein_id=UTX05918.1;transl_table=11 CP101611.1 Genbank gene 840875 841093 . - . ID=gene-NM058_04310;Name=yvfG;gbkey=Gene;gene=yvfG;gene_biotype=protein_coding;locus_tag=NM058_04310 CP101611.1 Protein Homology CDS 840875 841093 . - 0 ID=cds-UTX05919.1;Parent=gene-NM058_04310;Dbxref=NCBI_GP:UTX05919.1;Name=UTX05919.1;gbkey=CDS;gene=yvfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391301.1;locus_tag=NM058_04310;product=protein YvfG;protein_id=UTX05919.1;transl_table=11 CP101611.1 Genbank gene 841172 842482 . + . ID=gene-NM058_04315;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=NM058_04315 CP101611.1 Protein Homology CDS 841172 842482 . + 0 ID=cds-UTX05920.1;Parent=gene-NM058_04315;Dbxref=NCBI_GP:UTX05920.1;Name=UTX05920.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoN;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391300.1;locus_tag=NM058_04315;product=RNA polymerase factor sigma-54;protein_id=UTX05920.1;transl_table=11 CP101611.1 Genbank pseudogene 842509 844198 . - . ID=gene-NM058_04320;Name=lutP;gbkey=Gene;gene=lutP;gene_biotype=pseudogene;locus_tag=NM058_04320;pseudo=true CP101611.1 Protein Homology CDS 842509 844198 . - 0 ID=cds-NM058_04320;Parent=gene-NM058_04320;Note=frameshifted;gbkey=CDS;gene=lutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391299.1;locus_tag=NM058_04320;product=L-lactate permease LutP;pseudo=true;transl_table=11 CP101611.1 Genbank gene 844489 845148 . + . ID=gene-NM058_04325;Name=lutR;gbkey=Gene;gene=lutR;gene_biotype=protein_coding;gene_synonym=yvfI;locus_tag=NM058_04325 CP101611.1 Protein Homology CDS 844489 845148 . + 0 ID=cds-UTX06965.1;Parent=gene-NM058_04325;Dbxref=NCBI_GP:UTX06965.1;Name=UTX06965.1;gbkey=CDS;gene=lutR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391298.2;locus_tag=NM058_04325;product=L-lactate utilization/bacilysin biosynthesis transcriptional regulator LutR;protein_id=UTX06965.1;transl_table=11 CP101611.1 Genbank gene 845330 846322 . + . ID=gene-NM058_04330;Name=ganR;gbkey=Gene;gene=ganR;gene_biotype=protein_coding;locus_tag=NM058_04330 CP101611.1 Protein Homology CDS 845330 846322 . + 0 ID=cds-UTX05921.1;Parent=gene-NM058_04330;Dbxref=NCBI_GP:UTX05921.1;Name=UTX05921.1;gbkey=CDS;gene=ganR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391297.1;locus_tag=NM058_04330;product=galactan degradation operon transcriptional regulator GanR;protein_id=UTX05921.1;transl_table=11 CP101611.1 Genbank pseudogene 846464 847728 . + . ID=gene-NM058_04335;Name=ganS;gbkey=Gene;gene=ganS;gene_biotype=pseudogene;locus_tag=NM058_04335;pseudo=true CP101611.1 Protein Homology CDS 846464 847728 . + 0 ID=cds-NM058_04335;Parent=gene-NM058_04335;Note=frameshifted;gbkey=CDS;gene=ganS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391296.1;locus_tag=NM058_04335;product=arabinogalactan oligomer ABC transporter substrate-binding protein GanS;pseudo=true;transl_table=11 CP101611.1 Genbank gene 847768 849024 . + . ID=gene-NM058_04340;Name=ganP;gbkey=Gene;gene=ganP;gene_biotype=protein_coding;locus_tag=NM058_04340 CP101611.1 Protein Homology CDS 847768 849024 . + 0 ID=cds-UTX05922.1;Parent=gene-NM058_04340;Dbxref=NCBI_GP:UTX05922.1;Name=UTX05922.1;gbkey=CDS;gene=ganP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391295.1;locus_tag=NM058_04340;product=arabinogalactan oligomer ABC transporter permease GanP;protein_id=UTX05922.1;transl_table=11 CP101611.1 Genbank gene 849028 849879 . + . ID=gene-NM058_04345;Name=ganQ;gbkey=Gene;gene=ganQ;gene_biotype=protein_coding;locus_tag=NM058_04345 CP101611.1 Protein Homology CDS 849028 849879 . + 0 ID=cds-UTX05923.1;Parent=gene-NM058_04345;Dbxref=NCBI_GP:UTX05923.1;Name=UTX05923.1;gbkey=CDS;gene=ganQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391294.1;locus_tag=NM058_04345;product=arabinogalactan oligomer ABC transporter permease GanQ;protein_id=UTX05923.1;transl_table=11 CP101611.1 Genbank gene 849898 851961 . + . ID=gene-NM058_04350;Name=ganA;gbkey=Gene;gene=ganA;gene_biotype=protein_coding;locus_tag=NM058_04350 CP101611.1 Protein Homology CDS 849898 851961 . + 0 ID=cds-UTX05924.1;Parent=gene-NM058_04350;Dbxref=NCBI_GP:UTX05924.1;Name=UTX05924.1;gbkey=CDS;gene=ganA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391293.1;locus_tag=NM058_04350;product=beta-galactosidase GanA;protein_id=UTX05924.1;transl_table=11 CP101611.1 Genbank gene 852041 853330 . + . ID=gene-NM058_04355;Name=NM058_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04355 CP101611.1 Protein Homology CDS 852041 853330 . + 0 ID=cds-UTX05925.1;Parent=gene-NM058_04355;Dbxref=NCBI_GP:UTX05925.1;Name=UTX05925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391292.2;locus_tag=NM058_04355;product=arabinogalactan endo-beta-1%2C4-galactanase;protein_id=UTX05925.1;transl_table=11 CP101611.1 Genbank gene 853383 854594 . - . ID=gene-NM058_04360;Name=NM058_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04360 CP101611.1 Protein Homology CDS 853383 854594 . - 0 ID=cds-UTX05926.1;Parent=gene-NM058_04360;Dbxref=NCBI_GP:UTX05926.1;Name=UTX05926.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391291.1;locus_tag=NM058_04360;product=SpoIIE family protein phosphatase;protein_id=UTX05926.1;transl_table=11 CP101611.1 Genbank pseudogene 854628 855436 . - . ID=gene-NM058_04365;Name=rsbQ;gbkey=Gene;gene=rsbQ;gene_biotype=pseudogene;locus_tag=NM058_04365;pseudo=true CP101611.1 Protein Homology CDS 854628 855436 . - 0 ID=cds-NM058_04365;Parent=gene-NM058_04365;Note=frameshifted;gbkey=CDS;gene=rsbQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391290.1;locus_tag=NM058_04365;product=sigma factor SigB/phosphatase RsbP regulator RsbQ;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 855723 856627 . + . ID=gene-NM058_04370;Name=NM058_04370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04370;pseudo=true CP101611.1 Protein Homology CDS 855723 856627 . + 0 ID=cds-NM058_04370;Parent=gene-NM058_04370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391289.1;locus_tag=NM058_04370;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 856628 857365 . + . ID=gene-NM058_04375;Name=NM058_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04375 CP101611.1 Protein Homology CDS 856628 857365 . + 0 ID=cds-UTX05927.1;Parent=gene-NM058_04375;Dbxref=NCBI_GP:UTX05927.1;Name=UTX05927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391288.1;locus_tag=NM058_04375;product=ABC transporter permease;protein_id=UTX05927.1;transl_table=11 CP101611.1 Genbank pseudogene 857369 858483 . + . ID=gene-NM058_04380;Name=NM058_04380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04380;pseudo=true CP101611.1 Protein Homology CDS 857369 858483 . + 0 ID=cds-NM058_04380;Parent=gene-NM058_04380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391287.2;locus_tag=NM058_04380;product=sensor histidine kinase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 858500 859101 . + . ID=gene-NM058_04385;Name=yvfU;gbkey=Gene;gene=yvfU;gene_biotype=pseudogene;locus_tag=NM058_04385;pseudo=true CP101611.1 Protein Homology CDS 858500 859101 . + 0 ID=cds-NM058_04385;Parent=gene-NM058_04385;Note=frameshifted;gbkey=CDS;gene=yvfU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391286.1;locus_tag=NM058_04385;product=two-component system response regulator YvfU;pseudo=true;transl_table=11 CP101611.1 Genbank gene 859290 860006 . + . ID=gene-NM058_04390;Name=lutA;gbkey=Gene;gene=lutA;gene_biotype=protein_coding;locus_tag=NM058_04390 CP101611.1 Protein Homology CDS 859290 860006 . + 0 ID=cds-UTX05928.1;Parent=gene-NM058_04390;Dbxref=NCBI_GP:UTX05928.1;Name=UTX05928.1;gbkey=CDS;gene=lutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391285.1;locus_tag=NM058_04390;product=lactate utilization iron-sulfur protein LutA;protein_id=UTX05928.1;transl_table=11 CP101611.1 Genbank gene 860033 861472 . + . ID=gene-NM058_04395;Name=lutB;gbkey=Gene;gene=lutB;gene_biotype=protein_coding;locus_tag=NM058_04395 CP101611.1 Protein Homology CDS 860033 861472 . + 0 ID=cds-UTX05929.1;Parent=gene-NM058_04395;Dbxref=NCBI_GP:UTX05929.1;Name=UTX05929.1;gbkey=CDS;gene=lutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391284.1;locus_tag=NM058_04395;product=lactate utilization iron-sulfur protein LutB;protein_id=UTX05929.1;transl_table=11 CP101611.1 Genbank gene 861472 862194 . + . ID=gene-NM058_04400;Name=lutC;gbkey=Gene;gene=lutC;gene_biotype=protein_coding;locus_tag=NM058_04400 CP101611.1 Protein Homology CDS 861472 862194 . + 0 ID=cds-UTX05930.1;Parent=gene-NM058_04400;Dbxref=NCBI_GP:UTX05930.1;Name=UTX05930.1;gbkey=CDS;gene=lutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391283.1;locus_tag=NM058_04400;product=lactate utilization protein LutC;protein_id=UTX05930.1;transl_table=11 CP101611.1 Genbank gene 862301 863335 . + . ID=gene-NM058_04405;Name=NM058_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04405 CP101611.1 Protein Homology CDS 862301 863335 . + 0 ID=cds-UTX05931.1;Parent=gene-NM058_04405;Dbxref=NCBI_GP:UTX05931.1;Name=UTX05931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391282.1;locus_tag=NM058_04405;product=glycoside hydrolase family 18 protein;protein_id=UTX05931.1;transl_table=11 CP101611.1 cmsearch binding_site 863433 863668 . + . ID=id-CP101611.1:863433..863668;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 CP101611.1 Genbank gene 863733 865076 . + . ID=gene-NM058_04410;Name=NM058_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04410 CP101611.1 Protein Homology CDS 863733 865076 . + 0 ID=cds-UTX05932.1;Parent=gene-NM058_04410;Dbxref=NCBI_GP:UTX05932.1;Name=UTX05932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391281.1;locus_tag=NM058_04410;product=amino acid permease;protein_id=UTX05932.1;transl_table=11 CP101611.1 Genbank pseudogene 865116 866032 . - . ID=gene-NM058_04415;Name=NM058_04415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04415;pseudo=true CP101611.1 Protein Homology CDS 865116 866032 . - 0 ID=cds-NM058_04415;Parent=gene-NM058_04415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391280.1;locus_tag=NM058_04415;product=DMT family transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 866130 867008 . + . ID=gene-NM058_04420;Name=NM058_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04420 CP101611.1 Protein Homology CDS 866130 867008 . + 0 ID=cds-UTX05933.1;Parent=gene-NM058_04420;Dbxref=NCBI_GP:UTX05933.1;Name=UTX05933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391279.1;locus_tag=NM058_04420;product=LysR family transcriptional regulator;protein_id=UTX05933.1;transl_table=11 CP101611.1 Genbank gene 867166 868176 . + . ID=gene-NM058_04425;Name=NM058_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04425 CP101611.1 Protein Homology CDS 867166 868176 . + 0 ID=cds-UTX05934.1;Parent=gene-NM058_04425;Dbxref=NCBI_GP:UTX05934.1;Name=UTX05934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391278.1;locus_tag=NM058_04425;product=LLM class flavin-dependent oxidoreductase;protein_id=UTX05934.1;transl_table=11 CP101611.1 Genbank gene 868224 869312 . - . ID=gene-NM058_04430;Name=araR;gbkey=Gene;gene=araR;gene_biotype=protein_coding;locus_tag=NM058_04430 CP101611.1 Protein Homology CDS 868224 869312 . - 0 ID=cds-UTX05935.1;Parent=gene-NM058_04430;Dbxref=NCBI_GP:UTX05935.1;Name=UTX05935.1;gbkey=CDS;gene=araR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391277.2;locus_tag=NM058_04430;product=arabinose utilization transcriptional regulator AraR;protein_id=UTX05935.1;transl_table=11 CP101611.1 Genbank gene 869516 870910 . + . ID=gene-NM058_04435;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=NM058_04435 CP101611.1 Protein Homology CDS 869516 870910 . + 0 ID=cds-UTX05936.1;Parent=gene-NM058_04435;Dbxref=NCBI_GP:UTX05936.1;Name=UTX05936.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391276.1;locus_tag=NM058_04435;product=arabinose-proton symporter AraE;protein_id=UTX05936.1;transl_table=11 CP101611.1 Genbank gene 871208 872230 . + . ID=gene-NM058_04440;Name=cggR;gbkey=Gene;gene=cggR;gene_biotype=protein_coding;locus_tag=NM058_04440 CP101611.1 Protein Homology CDS 871208 872230 . + 0 ID=cds-UTX05937.1;Parent=gene-NM058_04440;Dbxref=NCBI_GP:UTX05937.1;Name=UTX05937.1;gbkey=CDS;gene=cggR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391275.1;locus_tag=NM058_04440;product=gapA transcriptional regulator CggR;protein_id=UTX05937.1;transl_table=11 CP101611.1 Genbank pseudogene 872277 873283 . + . ID=gene-NM058_04445;Name=gap;gbkey=Gene;gene=gap;gene_biotype=pseudogene;locus_tag=NM058_04445;pseudo=true CP101611.1 Protein Homology CDS 872277 873283 . + 0 ID=cds-NM058_04445;Parent=gene-NM058_04445;Note=frameshifted;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391274.1;locus_tag=NM058_04445;product=type I glyceraldehyde-3-phosphate dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 873599 874783 . + . ID=gene-NM058_04450;Name=NM058_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04450 CP101611.1 Protein Homology CDS 873599 874783 . + 0 ID=cds-UTX05938.1;Parent=gene-NM058_04450;Dbxref=NCBI_GP:UTX05938.1;Name=UTX05938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391273.1;locus_tag=NM058_04450;product=phosphoglycerate kinase;protein_id=UTX05938.1;transl_table=11 CP101611.1 Genbank gene 874814 875575 . + . ID=gene-NM058_04455;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=NM058_04455 CP101611.1 Protein Homology CDS 874814 875575 . + 0 ID=cds-UTX05939.1;Parent=gene-NM058_04455;Dbxref=NCBI_GP:UTX05939.1;Name=UTX05939.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391272.1;locus_tag=NM058_04455;product=triose-phosphate isomerase;protein_id=UTX05939.1;transl_table=11 CP101611.1 Genbank gene 875568 877103 . + . ID=gene-NM058_04460;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=NM058_04460 CP101611.1 Protein Homology CDS 875568 877103 . + 0 ID=cds-UTX05940.1;Parent=gene-NM058_04460;Dbxref=NCBI_GP:UTX05940.1;Name=UTX05940.1;gbkey=CDS;gene=gpmI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391271.1;locus_tag=NM058_04460;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=UTX05940.1;transl_table=11 CP101611.1 Genbank gene 877132 878424 . + . ID=gene-NM058_04465;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=NM058_04465 CP101611.1 Protein Homology CDS 877132 878424 . + 0 ID=cds-UTX05941.1;Parent=gene-NM058_04465;Dbxref=NCBI_GP:UTX05941.1;Name=UTX05941.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391270.1;locus_tag=NM058_04465;product=phosphopyruvate hydratase;protein_id=UTX05941.1;transl_table=11 CP101611.1 Genbank gene 878468 878929 . - . ID=gene-NM058_04470;Name=NM058_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04470 CP101611.1 Protein Homology CDS 878468 878929 . - 0 ID=cds-UTX05942.1;Parent=gene-NM058_04470;Dbxref=NCBI_GP:UTX05942.1;Name=UTX05942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019715756.1;locus_tag=NM058_04470;product=GNAT family N-acetyltransferase;protein_id=UTX05942.1;transl_table=11 CP101611.1 Genbank gene 879062 880876 . + . ID=gene-NM058_04475;Name=NM058_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04475 CP101611.1 Protein Homology CDS 879062 880876 . + 0 ID=cds-UTX05943.1;Parent=gene-NM058_04475;Dbxref=NCBI_GP:UTX05943.1;Name=UTX05943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259495.1;locus_tag=NM058_04475;product=zinc ribbon domain-containing protein;protein_id=UTX05943.1;transl_table=11 CP101611.1 Genbank gene 880916 881614 . - . ID=gene-NM058_04480;Name=NM058_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04480 CP101611.1 Protein Homology CDS 880916 881614 . - 0 ID=cds-UTX05944.1;Parent=gene-NM058_04480;Dbxref=NCBI_GP:UTX05944.1;Name=UTX05944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391267.1;locus_tag=NM058_04480;product=zinc ribbon domain-containing protein;protein_id=UTX05944.1;transl_table=11 CP101611.1 Genbank gene 881760 882374 . - . ID=gene-NM058_04485;Name=NM058_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04485 CP101611.1 Protein Homology CDS 881760 882374 . - 0 ID=cds-UTX05945.1;Parent=gene-NM058_04485;Dbxref=NCBI_GP:UTX05945.1;Name=UTX05945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391266.1;locus_tag=NM058_04485;product=PH domain-containing protein;protein_id=UTX05945.1;transl_table=11 CP101611.1 Genbank gene 882563 883120 . - . ID=gene-NM058_04490;Name=opcR;gbkey=Gene;gene=opcR;gene_biotype=protein_coding;gene_synonym=yvbF;locus_tag=NM058_04490 CP101611.1 Protein Homology CDS 882563 883120 . - 0 ID=cds-UTX05946.1;Parent=gene-NM058_04490;Dbxref=NCBI_GP:UTX05946.1;Name=UTX05946.1;gbkey=CDS;gene=opcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391264.1;locus_tag=NM058_04490;product=opuC operon transcriptional regulator OpcR;protein_id=UTX05946.1;transl_table=11 CP101611.1 Genbank pseudogene 883388 884525 . + . ID=gene-NM058_04495;Name=opuCA;gbkey=Gene;gene=opuCA;gene_biotype=pseudogene;locus_tag=NM058_04495;pseudo=true CP101611.1 Protein Homology CDS 883388 884525 . + 0 ID=cds-NM058_04495;Parent=gene-NM058_04495;Note=frameshifted;gbkey=CDS;gene=opuCA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391263.1;locus_tag=NM058_04495;product=osmoprotectant ABC transporter ATP-binding protein OpuCA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 884548 885201 . + . ID=gene-NM058_04500;Name=opuCB;gbkey=Gene;gene=opuCB;gene_biotype=protein_coding;locus_tag=NM058_04500 CP101611.1 Protein Homology CDS 884548 885201 . + 0 ID=cds-UTX05947.1;Parent=gene-NM058_04500;Dbxref=NCBI_GP:UTX05947.1;Name=UTX05947.1;gbkey=CDS;gene=opuCB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391262.1;locus_tag=NM058_04500;product=glycine betaine/carnitine/choline/choline sulfate ABC transporter permease OpuCB;protein_id=UTX05947.1;transl_table=11 CP101611.1 Genbank gene 885215 886126 . + . ID=gene-NM058_04505;Name=opuCC;gbkey=Gene;gene=opuCC;gene_biotype=protein_coding;locus_tag=NM058_04505 CP101611.1 Protein Homology CDS 885215 886126 . + 0 ID=cds-UTX05948.1;Parent=gene-NM058_04505;Dbxref=NCBI_GP:UTX05948.1;Name=UTX05948.1;Note=OpuCC (osmoprotectant uptake transporter system OpuB%2C component C)%2C as studied in Bacillus subtilis%2C is a lipoprotein%2C and is the substrate-binding protein of an ABC-type high-affinity transporter for both choline and betaine. OpuC is closely related to OpuB%2C which acts on choline%3B OpuCC is nearly 70 percent identical to OpuBC.;gbkey=CDS;gene=opuCC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015240605.1;locus_tag=NM058_04505;product=osmoprotectant ABC transporter substrate-binding lipoprotein OpuCC;protein_id=UTX05948.1;transl_table=11 CP101611.1 Genbank gene 886144 886818 . + . ID=gene-NM058_04510;Name=opuCD;gbkey=Gene;gene=opuCD;gene_biotype=protein_coding;locus_tag=NM058_04510 CP101611.1 Protein Homology CDS 886144 886818 . + 0 ID=cds-UTX05949.1;Parent=gene-NM058_04510;Dbxref=NCBI_GP:UTX05949.1;Name=UTX05949.1;gbkey=CDS;gene=opuCD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391250.1;locus_tag=NM058_04510;product=glycine betaine/carnitine/choline/choline sulfate ABC transporter permease OpuCD;protein_id=UTX05949.1;transl_table=11 CP101611.1 Genbank pseudogene 886852 887386 . - . ID=gene-NM058_04515;Name=NM058_04515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04515;pseudo=true CP101611.1 Protein Homology CDS 886852 887386 . - 0 ID=cds-NM058_04515;Parent=gene-NM058_04515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391254.2;locus_tag=NM058_04515;product=GbsR/MarR family transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 887671 888813 . + . ID=gene-NM058_04520;Name=opuBA;gbkey=Gene;gene=opuBA;gene_biotype=pseudogene;locus_tag=NM058_04520;pseudo=true CP101611.1 Protein Homology CDS 887671 888813 . + 0 ID=cds-NM058_04520;Parent=gene-NM058_04520;Note=OpuBA (osmoprotectant uptake transporter system OpuB%2C component A) is the ATP-binding subunit of the ABC transporter OpuB%2C one of several involved in the uptake of osmoprotectants (compatible solutes) such as choline%2C proline%2C and glycine betaine%2C in the endospore-forming model bacterium Bacillus subtilis. Note that three out of four subunits of OpuB are quite similar to those of OpuC.%3B frameshifted;gbkey=CDS;gene=opuBA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391253.1;locus_tag=NM058_04520;product=choline ABC transporter ATP-binding protein OpuBA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 888828 889481 . + . ID=gene-NM058_04525;Name=opuBB;gbkey=Gene;gene=opuBB;gene_biotype=protein_coding;locus_tag=NM058_04525 CP101611.1 Protein Homology CDS 888828 889481 . + 0 ID=cds-UTX05950.1;Parent=gene-NM058_04525;Dbxref=NCBI_GP:UTX05950.1;Name=UTX05950.1;gbkey=CDS;gene=opuBB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391252.1;locus_tag=NM058_04525;product=choline ABC transporter permease OpuBB;protein_id=UTX05950.1;transl_table=11 CP101611.1 Genbank gene 889493 890413 . + . ID=gene-NM058_04530;Name=opuBC;gbkey=Gene;gene=opuBC;gene_biotype=protein_coding;locus_tag=NM058_04530 CP101611.1 Protein Homology CDS 889493 890413 . + 0 ID=cds-UTX05951.1;Parent=gene-NM058_04530;Dbxref=NCBI_GP:UTX05951.1;Name=UTX05951.1;Note=OpuBC (osmoprotectant uptake transporter system OpuB%2C component C)%2C as studied in Bacillus subtilis%2C is a lipoprotein%2C and is the substrate-binding protein of an ABC-type high-affinity transporter. OpuB is closely related to OpuC%2C which acts on both choline and the betaine (trimethylated amino group form) of glycine%3B OpuBC is nearly 70 percent identical to OpuCC.;gbkey=CDS;gene=opuBC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391251.1;locus_tag=NM058_04530;product=choline ABC transporter substrate-binding lipoprotein OpuBC;protein_id=UTX05951.1;transl_table=11 CP101611.1 Genbank gene 890430 891110 . + . ID=gene-NM058_04535;Name=opuBD;gbkey=Gene;gene=opuBD;gene_biotype=protein_coding;locus_tag=NM058_04535 CP101611.1 Protein Homology CDS 890430 891110 . + 0 ID=cds-UTX05952.1;Parent=gene-NM058_04535;Dbxref=NCBI_GP:UTX05952.1;Name=UTX05952.1;gbkey=CDS;gene=opuBD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391250.1;locus_tag=NM058_04535;product=choline ABC transporter permease OpuBD;protein_id=UTX05952.1;transl_table=11 CP101611.1 Genbank gene 891153 892853 . - . ID=gene-NM058_04540;Name=NM058_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04540 CP101611.1 Protein Homology CDS 891153 892853 . - 0 ID=cds-UTX05953.1;Parent=gene-NM058_04540;Dbxref=NCBI_GP:UTX05953.1;Name=UTX05953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391249.1;locus_tag=NM058_04540;product=methyl-accepting chemotaxis protein;protein_id=UTX05953.1;transl_table=11 CP101611.1 Genbank gene 892979 893305 . - . ID=gene-NM058_04545;Name=catR;gbkey=Gene;gene=catR;gene_biotype=protein_coding;locus_tag=NM058_04545 CP101611.1 Protein Homology CDS 892979 893305 . - 0 ID=cds-UTX05954.1;Parent=gene-NM058_04545;Dbxref=NCBI_GP:UTX05954.1;Name=UTX05954.1;gbkey=CDS;gene=catR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391248.2;locus_tag=NM058_04545;product=catDE operon transcriptional regulator CatR;protein_id=UTX05954.1;transl_table=11 CP101611.1 Genbank gene 893397 893816 . - . ID=gene-NM058_04550;Name=NM058_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04550 CP101611.1 Protein Homology CDS 893397 893816 . - 0 ID=cds-UTX05955.1;Parent=gene-NM058_04550;Dbxref=NCBI_GP:UTX05955.1;Name=UTX05955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391247.1;locus_tag=NM058_04550;product=helix-turn-helix domain-containing protein;protein_id=UTX05955.1;transl_table=11 CP101611.1 Genbank gene 893845 894252 . - . ID=gene-NM058_04555;Name=rghR;gbkey=Gene;gene=rghR;gene_biotype=protein_coding;locus_tag=NM058_04555 CP101611.1 Protein Homology CDS 893845 894252 . - 0 ID=cds-UTX05956.1;Parent=gene-NM058_04555;Dbxref=NCBI_GP:UTX05956.1;Name=UTX05956.1;gbkey=CDS;gene=rghR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391246.1;locus_tag=NM058_04555;product=transcriptional repressor RghR;protein_id=UTX05956.1;transl_table=11 CP101611.1 Genbank pseudogene 894402 894634 . + . ID=gene-NM058_04560;Name=NM058_04560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04560;pseudo=true CP101611.1 Protein Homology CDS 894402 894634 . + 0 ID=cds-NM058_04560;Parent=gene-NM058_04560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391245.1;locus_tag=NM058_04560;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 894674 895442 . - . ID=gene-NM058_04565;Name=NM058_04565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04565;pseudo=true CP101611.1 Protein Homology CDS 894674 895442 . - 0 ID=cds-NM058_04565;Parent=gene-NM058_04565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391244.1;locus_tag=NM058_04565;product=alpha/beta hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 895594 895824 . + . ID=gene-NM058_04570;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=NM058_04570 CP101611.1 Protein Homology CDS 895594 895824 . + 0 ID=cds-UTX05957.1;Parent=gene-NM058_04570;Dbxref=NCBI_GP:UTX05957.1;Name=UTX05957.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secG;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391243.1;locus_tag=NM058_04570;product=preprotein translocase subunit SecG;protein_id=UTX05957.1;transl_table=11 CP101611.1 Genbank gene 895956 896696 . + . ID=gene-NM058_04575;Name=NM058_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04575 CP101611.1 Protein Homology CDS 895956 896696 . + 0 ID=cds-UTX05958.1;Parent=gene-NM058_04575;Dbxref=NCBI_GP:UTX05958.1;Name=UTX05958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391242.2;locus_tag=NM058_04575;product=carboxylesterase;protein_id=UTX05958.1;transl_table=11 CP101611.1 Genbank gene 896715 899054 . + . ID=gene-NM058_04580;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=NM058_04580 CP101611.1 Protein Homology CDS 896715 899054 . + 0 ID=cds-UTX05959.1;Parent=gene-NM058_04580;Dbxref=NCBI_GP:UTX05959.1;Name=UTX05959.1;Ontology_term=GO:0006401,GO:0008997;gbkey=CDS;gene=rnr;go_function=ribonuclease R activity|0008997||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391241.1;locus_tag=NM058_04580;product=ribonuclease R;protein_id=UTX05959.1;transl_table=11 CP101611.1 Genbank gene 899199 899669 . + . ID=gene-NM058_04585;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=NM058_04585 CP101611.1 Protein Homology CDS 899199 899669 . + 0 ID=cds-UTX05960.1;Parent=gene-NM058_04585;Dbxref=NCBI_GP:UTX05960.1;Name=UTX05960.1;gbkey=CDS;gene=smpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391240.1;locus_tag=NM058_04585;product=SsrA-binding protein;protein_id=UTX05960.1;transl_table=11 CP101611.1 Genbank gene 899846 900208 . + . ID=gene-NM058_04590;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=NM058_04590 CP101611.1 cmsearch tmRNA 899846 900208 . + . ID=rna-NM058_04590;Parent=gene-NM058_04590;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_04590;product=transfer-messenger RNA CP101611.1 cmsearch exon 899846 900208 . + . ID=exon-NM058_04590-1;Parent=rna-NM058_04590;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_04590;product=transfer-messenger RNA CP101611.1 Genbank gene 900682 901329 . - . ID=gene-NM058_04595;Name=NM058_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04595 CP101611.1 Protein Homology CDS 900682 901329 . - 0 ID=cds-UTX05961.1;Parent=gene-NM058_04595;Dbxref=NCBI_GP:UTX05961.1;Name=UTX05961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003235166.1;locus_tag=NM058_04595;product=hypothetical protein;protein_id=UTX05961.1;transl_table=11 CP101611.1 Genbank gene 901489 901812 . + . ID=gene-NM058_04600;Name=NM058_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04600 CP101611.1 GeneMarkS-2+ CDS 901489 901812 . + 0 ID=cds-UTX05962.1;Parent=gene-NM058_04600;Dbxref=NCBI_GP:UTX05962.1;Name=UTX05962.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_04600;product=hypothetical protein;protein_id=UTX05962.1;transl_table=11 CP101611.1 Genbank gene 902410 903204 . + . ID=gene-NM058_04605;Name=NM058_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04605 CP101611.1 Protein Homology CDS 902410 903204 . + 0 ID=cds-UTX05963.1;Parent=gene-NM058_04605;Dbxref=NCBI_GP:UTX05963.1;Name=UTX05963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391239.1;locus_tag=NM058_04605;product=SDR family oxidoreductase;protein_id=UTX05963.1;transl_table=11 CP101611.1 Genbank gene 903315 903887 . + . ID=gene-NM058_04610;Name=NM058_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04610 CP101611.1 Protein Homology CDS 903315 903887 . + 0 ID=cds-UTX05964.1;Parent=gene-NM058_04610;Dbxref=NCBI_GP:UTX05964.1;Name=UTX05964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391238.1;locus_tag=NM058_04610;product=TetR/AcrR family transcriptional regulator;protein_id=UTX05964.1;transl_table=11 CP101611.1 Genbank gene 903884 904243 . + . ID=gene-NM058_04615;Name=NM058_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04615 CP101611.1 Protein Homology CDS 903884 904243 . + 0 ID=cds-UTX05965.1;Parent=gene-NM058_04615;Dbxref=NCBI_GP:UTX05965.1;Name=UTX05965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391237.1;locus_tag=NM058_04615;product=multidrug efflux SMR transporter;protein_id=UTX05965.1;transl_table=11 CP101611.1 Genbank gene 904240 904644 . + . ID=gene-NM058_04620;Name=NM058_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04620 CP101611.1 Protein Homology CDS 904240 904644 . + 0 ID=cds-UTX05966.1;Parent=gene-NM058_04620;Dbxref=NCBI_GP:UTX05966.1;Name=UTX05966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259476.1;locus_tag=NM058_04620;product=YvaD family protein;protein_id=UTX05966.1;transl_table=11 CP101611.1 Genbank gene 904938 906848 . + . ID=gene-NM058_04625;Name=NM058_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04625 CP101611.1 Protein Homology CDS 904938 906848 . + 0 ID=cds-UTX05967.1;Parent=gene-NM058_04625;Dbxref=NCBI_GP:UTX05967.1;Name=UTX05967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003235160.1;locus_tag=NM058_04625;product=FUSC family protein;protein_id=UTX05967.1;transl_table=11 CP101611.1 Genbank gene 906979 907614 . + . ID=gene-NM058_04630;Name=azoRB;gbkey=Gene;gene=azoRB;gene_biotype=protein_coding;gene_synonym=azoR2;locus_tag=NM058_04630 CP101611.1 Protein Homology CDS 906979 907614 . + 0 ID=cds-UTX05968.1;Parent=gene-NM058_04630;Dbxref=NCBI_GP:UTX05968.1;Name=UTX05968.1;gbkey=CDS;gene=azoRB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391234.1;locus_tag=NM058_04630;product=FMN-dependent NADH-azoreductase AzoRB;protein_id=UTX05968.1;transl_table=11 CP101611.1 Genbank pseudogene 907650 908725 . - . ID=gene-NM058_04635;Name=NM058_04635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04635;pseudo=true CP101611.1 Protein Homology CDS 907650 908725 . - 0 ID=cds-NM058_04635;Parent=gene-NM058_04635;Note=frameshifted;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015384641.1;locus_tag=NM058_04635;product=oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 908853 909158 . + . ID=gene-NM058_04640;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=NM058_04640 CP101611.1 Protein Homology CDS 908853 909158 . + 0 ID=cds-UTX05969.1;Parent=gene-NM058_04640;Dbxref=NCBI_GP:UTX05969.1;Name=UTX05969.1;gbkey=CDS;gene=csoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391232.1;locus_tag=NM058_04640;product=copper-sensing transcriptional repressor CsoR;protein_id=UTX05969.1;transl_table=11 CP101611.1 Genbank gene 909232 909441 . + . ID=gene-NM058_04645;Name=copZ;gbkey=Gene;gene=copZ;gene_biotype=protein_coding;locus_tag=NM058_04645 CP101611.1 Protein Homology CDS 909232 909441 . + 0 ID=cds-UTX05970.1;Parent=gene-NM058_04645;Dbxref=NCBI_GP:UTX05970.1;Name=UTX05970.1;Ontology_term=GO:0005507;gbkey=CDS;gene=copZ;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019715726.1;locus_tag=NM058_04645;product=copper chaperone CopZ;protein_id=UTX05970.1;transl_table=11 CP101611.1 Genbank gene 909525 911936 . + . ID=gene-NM058_04650;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=NM058_04650 CP101611.1 Protein Homology CDS 909525 911936 . + 0 ID=cds-UTX05971.1;Parent=gene-NM058_04650;Dbxref=NCBI_GP:UTX05971.1;Name=UTX05971.1;gbkey=CDS;gene=copA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391230.2;locus_tag=NM058_04650;product=copper-exporting P-type ATPase CopA;protein_id=UTX05971.1;transl_table=11 CP101611.1 Genbank pseudogene 912096 914203 . + . ID=gene-NM058_04655;Name=NM058_04655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04655;pseudo=true CP101611.1 Protein Homology CDS 912096 914203 . + 0 ID=cds-NM058_04655;Parent=gene-NM058_04655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391229.3;locus_tag=NM058_04655;product=heavy metal translocating P-type ATPase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 914323 914991 . + . ID=gene-NM058_04660;Name=bdbD;gbkey=Gene;gene=bdbD;gene_biotype=protein_coding;locus_tag=NM058_04660 CP101611.1 Protein Homology CDS 914323 914991 . + 0 ID=cds-UTX05972.1;Parent=gene-NM058_04660;Dbxref=NCBI_GP:UTX05972.1;Name=UTX05972.1;gbkey=CDS;gene=bdbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391228.1;locus_tag=NM058_04660;product=disulfide bond formation protein BdbD;protein_id=UTX05972.1;transl_table=11 CP101611.1 Genbank gene 914996 915412 . + . ID=gene-NM058_04665;Name=NM058_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04665 CP101611.1 Protein Homology CDS 914996 915412 . + 0 ID=cds-UTX05973.1;Parent=gene-NM058_04665;Dbxref=NCBI_GP:UTX05973.1;Name=UTX05973.1;Ontology_term=GO:0006457,GO:0015035,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391227.1;locus_tag=NM058_04665;product=disulfide oxidoreductase;protein_id=UTX05973.1;transl_table=11 CP101611.1 Genbank pseudogene 915598 916204 . + . ID=gene-NM058_04670;Name=NM058_04670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04670;pseudo=true CP101611.1 Protein Homology CDS 915598 916204 . + 0 ID=cds-NM058_04670;Parent=gene-NM058_04670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391226.1;locus_tag=NM058_04670;product=trimeric intracellular cation channel family protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 916397 918717 . + . ID=gene-NM058_04675;Name=NM058_04675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04675;pseudo=true CP101611.1 Protein Homology CDS 916397 918717 . + 0 ID=cds-NM058_04675;Parent=gene-NM058_04675;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391225.1;locus_tag=NM058_04675;product=UvrD-helicase domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 918886 920700 . + . ID=gene-NM058_04680;Name=NM058_04680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04680;pseudo=true CP101611.1 Protein Homology CDS 918886 920700 . + 0 ID=cds-NM058_04680;Parent=gene-NM058_04680;Note=internal stop;Ontology_term=GO:0006790,GO:0004783,GO:0009337;gbkey=CDS;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391224.1;locus_tag=NM058_04680;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;pseudo=true;transl_table=11 CP101611.1 Genbank gene 920726 922438 . + . ID=gene-NM058_04685;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=NM058_04685 CP101611.1 Protein Homology CDS 920726 922438 . + 0 ID=cds-UTX05974.1;Parent=gene-NM058_04685;Dbxref=NCBI_GP:UTX05974.1;Name=UTX05974.1;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391223.1;locus_tag=NM058_04685;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=UTX05974.1;transl_table=11 CP101611.1 Genbank pseudogene 922695 924706 . + . ID=gene-NM058_04690;Name=NM058_04690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04690;pseudo=true CP101611.1 Protein Homology CDS 922695 924706 . + 0 ID=cds-NM058_04690;Parent=gene-NM058_04690;Note=frameshifted;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391222.1;locus_tag=NM058_04690;product=Na+/H+ antiporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 924751 925236 . - . ID=gene-NM058_04695;Name=yvgO;gbkey=Gene;gene=yvgO;gene_biotype=protein_coding;locus_tag=NM058_04695 CP101611.1 Protein Homology CDS 924751 925236 . - 0 ID=cds-UTX05975.1;Parent=gene-NM058_04695;Dbxref=NCBI_GP:UTX05975.1;Name=UTX05975.1;gbkey=CDS;gene=yvgO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391221.1;locus_tag=NM058_04695;product=stress response protein YvgO;protein_id=UTX05975.1;transl_table=11 CP101611.1 Genbank gene 925459 926289 . + . ID=gene-NM058_04700;Name=pgoN;gbkey=Gene;gene=pgoN;gene_biotype=protein_coding;locus_tag=NM058_04700 CP101611.1 Protein Homology CDS 925459 926289 . + 0 ID=cds-UTX05976.1;Parent=gene-NM058_04700;Dbxref=NCBI_GP:UTX05976.1;Name=UTX05976.1;gbkey=CDS;gene=pgoN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391220.1;locus_tag=NM058_04700;product=glyoxal/methylglyoxal reductase;protein_id=UTX05976.1;transl_table=11 CP101611.1 Genbank gene 926323 927015 . - . ID=gene-NM058_04705;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=NM058_04705 CP101611.1 Protein Homology CDS 926323 927015 . - 0 ID=cds-UTX05977.1;Parent=gene-NM058_04705;Dbxref=NCBI_GP:UTX05977.1;Name=UTX05977.1;Ontology_term=GO:0015689,GO:0015412,GO:0005887,GO:0055052;gbkey=CDS;gene=modB;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391219.3;locus_tag=NM058_04705;product=molybdate ABC transporter permease subunit;protein_id=UTX05977.1;transl_table=11 CP101611.1 Genbank gene 926987 927769 . - . ID=gene-NM058_04710;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=NM058_04710 CP101611.1 Protein Homology CDS 926987 927769 . - 0 ID=cds-UTX05978.1;Parent=gene-NM058_04710;Dbxref=NCBI_GP:UTX05978.1;Name=UTX05978.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0031362,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,anchored component of external side of plasma membrane|0031362||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391218.1;locus_tag=NM058_04710;product=molybdate ABC transporter substrate-binding protein;protein_id=UTX05978.1;transl_table=11 CP101611.1 Genbank gene 927880 928806 . + . ID=gene-NM058_04715;Name=NM058_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04715 CP101611.1 Protein Homology CDS 927880 928806 . + 0 ID=cds-UTX05979.1;Parent=gene-NM058_04715;Dbxref=NCBI_GP:UTX05979.1;Name=UTX05979.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391217.1;locus_tag=NM058_04715;product=excisionase family DNA-binding protein;protein_id=UTX05979.1;transl_table=11 CP101611.1 Genbank gene 928833 930686 . - . ID=gene-NM058_04720;Name=NM058_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04720 CP101611.1 Protein Homology CDS 928833 930686 . - 0 ID=cds-UTX05980.1;Parent=gene-NM058_04720;Dbxref=NCBI_GP:UTX05980.1;Name=UTX05980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391216.1;locus_tag=NM058_04720;product=LTA synthase family protein;protein_id=UTX05980.1;transl_table=11 CP101611.1 Genbank gene 930785 931267 . - . ID=gene-NM058_04725;Name=NM058_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04725 CP101611.1 Protein Homology CDS 930785 931267 . - 0 ID=cds-UTX05981.1;Parent=gene-NM058_04725;Dbxref=NCBI_GP:UTX05981.1;Name=UTX05981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391215.1;locus_tag=NM058_04725;product=metal-dependent hydrolase;protein_id=UTX05981.1;transl_table=11 CP101611.1 Genbank gene 931434 931574 . + . ID=gene-NM058_04730;Name=sspJ;gbkey=Gene;gene=sspJ;gene_biotype=protein_coding;locus_tag=NM058_04730 CP101611.1 Protein Homology CDS 931434 931574 . + 0 ID=cds-UTX05982.1;Parent=gene-NM058_04730;Dbxref=NCBI_GP:UTX05982.1;Name=UTX05982.1;Ontology_term=GO:0030436;gbkey=CDS;gene=sspJ;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054593.1;locus_tag=NM058_04730;product=small acid-soluble spore protein SspJ;protein_id=UTX05982.1;transl_table=11 CP101611.1 cmsearch riboswitch 931694 931873 . + . ID=id-CP101611.1:931694..931873;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 931977 933386 . + . ID=gene-NM058_04735;Name=NM058_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04735 CP101611.1 Protein Homology CDS 931977 933386 . + 0 ID=cds-UTX05983.1;Parent=gene-NM058_04735;Dbxref=NCBI_GP:UTX05983.1;Name=UTX05983.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240702.1;locus_tag=NM058_04735;product=amino acid permease;protein_id=UTX05983.1;transl_table=11 CP101611.1 Genbank gene 933447 933920 . - . ID=gene-NM058_04740;Name=NM058_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04740 CP101611.1 Protein Homology CDS 933447 933920 . - 0 ID=cds-UTX05984.1;Parent=gene-NM058_04740;Dbxref=NCBI_GP:UTX05984.1;Name=UTX05984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014115877.1;locus_tag=NM058_04740;product=DMT family transporter;protein_id=UTX05984.1;transl_table=11 CP101611.1 Genbank gene 933931 934359 . - . ID=gene-NM058_04745;Name=NM058_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04745 CP101611.1 Protein Homology CDS 933931 934359 . - 0 ID=cds-UTX05985.1;Parent=gene-NM058_04745;Dbxref=NCBI_GP:UTX05985.1;Name=UTX05985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017366509.1;locus_tag=NM058_04745;product=DMT family transporter;protein_id=UTX05985.1;transl_table=11 CP101611.1 Genbank gene 934435 934749 . - . ID=gene-NM058_04750;Name=NM058_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04750 CP101611.1 Protein Homology CDS 934435 934749 . - 0 ID=cds-UTX05986.1;Parent=gene-NM058_04750;Dbxref=NCBI_GP:UTX05986.1;Name=UTX05986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014115879.1;locus_tag=NM058_04750;product=helix-turn-helix domain-containing protein;protein_id=UTX05986.1;transl_table=11 CP101611.1 Genbank gene 934906 935853 . - . ID=gene-NM058_04755;Name=NM058_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04755 CP101611.1 Protein Homology CDS 934906 935853 . - 0 ID=cds-UTX05987.1;Parent=gene-NM058_04755;Dbxref=NCBI_GP:UTX05987.1;Name=UTX05987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391213.1;locus_tag=NM058_04755;product=iron-hydroxamate ABC transporter substrate-binding protein;protein_id=UTX05987.1;transl_table=11 CP101611.1 Genbank gene 936057 937103 . + . ID=gene-NM058_04760;Name=NM058_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04760 CP101611.1 Protein Homology CDS 936057 937103 . + 0 ID=cds-UTX05988.1;Parent=gene-NM058_04760;Dbxref=NCBI_GP:UTX05988.1;Name=UTX05988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003244595.1;locus_tag=NM058_04760;product=iron ABC transporter permease;protein_id=UTX05988.1;transl_table=11 CP101611.1 Genbank pseudogene 937103 938112 . + . ID=gene-NM058_04765;Name=NM058_04765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04765;pseudo=true CP101611.1 Protein Homology CDS 937103 938112 . + 0 ID=cds-NM058_04765;Parent=gene-NM058_04765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391211.1;locus_tag=NM058_04765;product=iron ABC transporter permease;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 938128 938936 . + . ID=gene-NM058_04770;Name=NM058_04770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04770;pseudo=true CP101611.1 Protein Homology CDS 938128 938936 . + 0 ID=cds-NM058_04770;Parent=gene-NM058_04770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391210.1;locus_tag=NM058_04770;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 939108 940301 . + . ID=gene-NM058_04775;Name=NM058_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04775 CP101611.1 Protein Homology CDS 939108 940301 . + 0 ID=cds-UTX05989.1;Parent=gene-NM058_04775;Dbxref=NCBI_GP:UTX05989.1;Name=UTX05989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391209.1;locus_tag=NM058_04775;product=efflux RND transporter periplasmic adaptor subunit;protein_id=UTX05989.1;transl_table=11 CP101611.1 Genbank gene 940285 940974 . + . ID=gene-NM058_04780;Name=NM058_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04780 CP101611.1 Protein Homology CDS 940285 940974 . + 0 ID=cds-UTX05990.1;Parent=gene-NM058_04780;Dbxref=NCBI_GP:UTX05990.1;Name=UTX05990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391208.2;locus_tag=NM058_04780;product=ABC transporter ATP-binding protein;protein_id=UTX05990.1;transl_table=11 CP101611.1 Genbank gene 940967 942196 . + . ID=gene-NM058_04785;Name=NM058_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04785 CP101611.1 Protein Homology CDS 940967 942196 . + 0 ID=cds-UTX05991.1;Parent=gene-NM058_04785;Dbxref=NCBI_GP:UTX05991.1;Name=UTX05991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391207.3;locus_tag=NM058_04785;product=ABC transporter permease;protein_id=UTX05991.1;transl_table=11 CP101611.1 Genbank pseudogene 942229 942637 . - . ID=gene-NM058_04790;Name=NM058_04790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04790;pseudo=true CP101611.1 Protein Homology CDS 942229 942637 . - 0 ID=cds-NM058_04790;Parent=gene-NM058_04790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391205.1;locus_tag=NM058_04790;product=regulatory YrvL family protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 942698 943854 . - . ID=gene-NM058_04795;Name=oxdC;gbkey=Gene;gene=oxdC;gene_biotype=pseudogene;gene_synonym=yvrK;locus_tag=NM058_04795;pseudo=true CP101611.1 Protein Homology CDS 942698 943854 . - 0 ID=cds-NM058_04795;Parent=gene-NM058_04795;Note=frameshifted;gbkey=CDS;gene=oxdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391204.1;locus_tag=NM058_04795;product=oxalate decarboxylase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 943974 944129 . - . ID=gene-NM058_04800;Name=NM058_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04800 CP101611.1 Protein Homology CDS 943974 944129 . - 0 ID=cds-UTX05992.1;Parent=gene-NM058_04800;Dbxref=NCBI_GP:UTX05992.1;Name=UTX05992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007410044.1;locus_tag=NM058_04800;product=YvrJ family protein;protein_id=UTX05992.1;transl_table=11 CP101611.1 Genbank gene 944331 944867 . + . ID=gene-NM058_04805;Name=sigO;gbkey=Gene;gene=sigO;gene_biotype=protein_coding;gene_synonym=yvrI;locus_tag=NM058_04805 CP101611.1 Protein Homology CDS 944331 944867 . + 0 ID=cds-UTX06966.1;Parent=gene-NM058_04805;Dbxref=NCBI_GP:UTX06966.1;Name=UTX06966.1;gbkey=CDS;gene=sigO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014480844.1;locus_tag=NM058_04805;product=RNA polymerase sigma factor SigO;protein_id=UTX06966.1;transl_table=11 CP101611.1 Genbank gene 944864 945100 . + . ID=gene-NM058_04810;Name=rsoA;gbkey=Gene;gene=rsoA;gene_biotype=protein_coding;locus_tag=NM058_04810 CP101611.1 Protein Homology CDS 944864 945100 . + 0 ID=cds-UTX05993.1;Parent=gene-NM058_04810;Dbxref=NCBI_GP:UTX05993.1;Name=UTX05993.1;gbkey=CDS;gene=rsoA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097787.1;locus_tag=NM058_04810;product=sigma-O factor regulator RsoA;protein_id=UTX05993.1;transl_table=11 CP101611.1 Genbank gene 945250 945963 . + . ID=gene-NM058_04815;Name=yvrH;gbkey=Gene;gene=yvrH;gene_biotype=protein_coding;locus_tag=NM058_04815 CP101611.1 Protein Homology CDS 945250 945963 . + 0 ID=cds-UTX05994.1;Parent=gene-NM058_04815;Dbxref=NCBI_GP:UTX05994.1;Name=UTX05994.1;gbkey=CDS;gene=yvrH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391202.2;locus_tag=NM058_04815;product=two-component system response regulator YvrH;protein_id=UTX05994.1;transl_table=11 CP101611.1 Genbank gene 945960 947702 . + . ID=gene-NM058_04820;Name=yvrG;gbkey=Gene;gene=yvrG;gene_biotype=protein_coding;locus_tag=NM058_04820 CP101611.1 Protein Homology CDS 945960 947702 . + 0 ID=cds-UTX05995.1;Parent=gene-NM058_04820;Dbxref=NCBI_GP:UTX05995.1;Name=UTX05995.1;gbkey=CDS;gene=yvrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391201.2;locus_tag=NM058_04820;product=two-component system sensor histidine kinase YvrG;protein_id=UTX05995.1;transl_table=11 CP101611.1 Genbank gene 947771 948649 . + . ID=gene-NM058_04825;Name=NM058_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04825 CP101611.1 Protein Homology CDS 947771 948649 . + 0 ID=cds-UTX05996.1;Parent=gene-NM058_04825;Dbxref=NCBI_GP:UTX05996.1;Name=UTX05996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391200.1;locus_tag=NM058_04825;product=SMP-30/gluconolactonase/LRE family protein;protein_id=UTX05996.1;transl_table=11 CP101611.1 Genbank pseudogene 948686 949476 . - . ID=gene-NM058_04830;Name=NM058_04830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04830;pseudo=true CP101611.1 Protein Homology CDS 948686 949476 . - 0 ID=cds-NM058_04830;Parent=gene-NM058_04830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391199.1;locus_tag=NM058_04830;product=SDR family oxidoreductase;pseudo=true;transl_table=11 CP101611.1 cmsearch riboswitch 949630 949770 . + . ID=id-CP101611.1:949630..949770;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 949875 950816 . + . ID=gene-NM058_04835;Name=NM058_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04835 CP101611.1 Protein Homology CDS 949875 950816 . + 0 ID=cds-UTX05997.1;Parent=gene-NM058_04835;Dbxref=NCBI_GP:UTX05997.1;Name=UTX05997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391198.1;locus_tag=NM058_04835;product=ABC transporter substrate-binding protein;protein_id=UTX05997.1;transl_table=11 CP101611.1 Genbank pseudogene 950779 951828 . + . ID=gene-NM058_04840;Name=NM058_04840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04840;pseudo=true CP101611.1 Protein Homology CDS 950779 951828 . + 0 ID=cds-NM058_04840;Parent=gene-NM058_04840;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391197.1;locus_tag=NM058_04840;product=iron ABC transporter permease;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 951839 953166 . + . ID=gene-NM058_04845;Name=NM058_04845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04845;pseudo=true CP101611.1 Protein Homology CDS 951839 953166 . + 0 ID=cds-NM058_04845;Parent=gene-NM058_04845;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391196.1;locus_tag=NM058_04845;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 953188 953769 . + . ID=gene-NM058_04850;Name=NM058_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04850 CP101611.1 Protein Homology CDS 953188 953769 . + 0 ID=cds-UTX05998.1;Parent=gene-NM058_04850;Dbxref=NCBI_GP:UTX05998.1;Name=UTX05998.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391195.2;locus_tag=NM058_04850;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=UTX05998.1;transl_table=11 CP101611.1 Genbank pseudogene 953944 955211 . + . ID=gene-NM058_04855;Name=NM058_04855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_04855;pseudo=true CP101611.1 Protein Homology CDS 953944 955211 . + 0 ID=cds-NM058_04855;Parent=gene-NM058_04855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391194.1;locus_tag=NM058_04855;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 955373 955753 . + . ID=gene-NM058_04860;Name=liaI;gbkey=Gene;gene=liaI;gene_biotype=protein_coding;locus_tag=NM058_04860 CP101611.1 Protein Homology CDS 955373 955753 . + 0 ID=cds-UTX05999.1;Parent=gene-NM058_04860;Dbxref=NCBI_GP:UTX05999.1;Name=UTX05999.1;gbkey=CDS;gene=liaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391193.1;locus_tag=NM058_04860;product=cell envelope stress-induced membrane anchor protein LiaI;protein_id=UTX05999.1;transl_table=11 CP101611.1 Genbank gene 955780 956460 . + . ID=gene-NM058_04865;Name=NM058_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04865 CP101611.1 Protein Homology CDS 955780 956460 . + 0 ID=cds-UTX06000.1;Parent=gene-NM058_04865;Dbxref=NCBI_GP:UTX06000.1;Name=UTX06000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391192.1;locus_tag=NM058_04865;product=PspA/IM30 family protein;protein_id=UTX06000.1;transl_table=11 CP101611.1 Genbank gene 956561 957433 . + . ID=gene-NM058_04870;Name=NM058_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04870 CP101611.1 Protein Homology CDS 956561 957433 . + 0 ID=cds-UTX06001.1;Parent=gene-NM058_04870;Dbxref=NCBI_GP:UTX06001.1;Name=UTX06001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391191.2;locus_tag=NM058_04870;product=DUF4097 domain-containing protein;protein_id=UTX06001.1;transl_table=11 CP101611.1 Genbank pseudogene 957467 958191 . + . ID=gene-NM058_04875;Name=liaF;gbkey=Gene;gene=liaF;gene_biotype=pseudogene;locus_tag=NM058_04875;pseudo=true CP101611.1 Protein Homology CDS 957467 958191 . + 0 ID=cds-NM058_04875;Parent=gene-NM058_04875;Note=frameshifted;gbkey=CDS;gene=liaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391190.1;locus_tag=NM058_04875;product=LiaRS two-component regulatory system accessory protein LiaF;pseudo=true;transl_table=11 CP101611.1 Genbank gene 958188 959270 . + . ID=gene-NM058_04880;Name=liaS;gbkey=Gene;gene=liaS;gene_biotype=protein_coding;locus_tag=NM058_04880 CP101611.1 Protein Homology CDS 958188 959270 . + 0 ID=cds-UTX06002.1;Parent=gene-NM058_04880;Dbxref=NCBI_GP:UTX06002.1;Name=UTX06002.1;gbkey=CDS;gene=liaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391189.1;locus_tag=NM058_04880;product=two-component system sensor histidine kinase LiaS;protein_id=UTX06002.1;transl_table=11 CP101611.1 Genbank gene 959248 959883 . + . ID=gene-NM058_04885;Name=liaR;gbkey=Gene;gene=liaR;gene_biotype=protein_coding;locus_tag=NM058_04885 CP101611.1 Protein Homology CDS 959248 959883 . + 0 ID=cds-UTX06003.1;Parent=gene-NM058_04885;Dbxref=NCBI_GP:UTX06003.1;Name=UTX06003.1;gbkey=CDS;gene=liaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003228514.1;locus_tag=NM058_04885;product=two-component system response regulator LiaR;protein_id=UTX06003.1;transl_table=11 CP101611.1 Genbank gene 959891 961012 . - . ID=gene-NM058_04890;Name=NM058_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04890 CP101611.1 Protein Homology CDS 959891 961012 . - 0 ID=cds-UTX06004.1;Parent=gene-NM058_04890;Dbxref=NCBI_GP:UTX06004.1;Name=UTX06004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391187.1;locus_tag=NM058_04890;product=Ger(x)C family spore germination protein;protein_id=UTX06004.1;transl_table=11 CP101611.1 Genbank gene 961009 962106 . - . ID=gene-NM058_04895;Name=NM058_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04895 CP101611.1 Protein Homology CDS 961009 962106 . - 0 ID=cds-UTX06005.1;Parent=gene-NM058_04895;Dbxref=NCBI_GP:UTX06005.1;Name=UTX06005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391186.1;locus_tag=NM058_04895;product=spore germination protein;protein_id=UTX06005.1;transl_table=11 CP101611.1 Genbank gene 962075 963523 . - . ID=gene-NM058_04900;Name=gerAA;gbkey=Gene;gene=gerAA;gene_biotype=protein_coding;locus_tag=NM058_04900 CP101611.1 Protein Homology CDS 962075 963523 . - 0 ID=cds-UTX06006.1;Parent=gene-NM058_04900;Dbxref=NCBI_GP:UTX06006.1;Name=UTX06006.1;gbkey=CDS;gene=gerAA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391185.2;locus_tag=NM058_04900;product=spore germination receptor protein GerAA;protein_id=UTX06006.1;transl_table=11 CP101611.1 Genbank gene 963641 963826 . + . ID=gene-NM058_04905;Name=NM058_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04905 CP101611.1 Protein Homology CDS 963641 963826 . + 0 ID=cds-UTX06007.1;Parent=gene-NM058_04905;Dbxref=NCBI_GP:UTX06007.1;Name=UTX06007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097786.1;locus_tag=NM058_04905;product=YvzF family protein;protein_id=UTX06007.1;transl_table=11 CP101611.1 Genbank gene 963893 965281 . + . ID=gene-NM058_04910;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=NM058_04910 CP101611.1 Protein Homology CDS 963893 965281 . + 0 ID=cds-UTX06008.1;Parent=gene-NM058_04910;Dbxref=NCBI_GP:UTX06008.1;Name=UTX06008.1;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391184.1;locus_tag=NM058_04910;product=class II fumarate hydratase;protein_id=UTX06008.1;transl_table=11 CP101611.1 Genbank gene 965321 966196 . - . ID=gene-NM058_04915;Name=NM058_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04915 CP101611.1 Protein Homology CDS 965321 966196 . - 0 ID=cds-UTX06009.1;Parent=gene-NM058_04915;Dbxref=NCBI_GP:UTX06009.1;Name=UTX06009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391183.1;locus_tag=NM058_04915;product=TetR/AcrR family transcriptional regulator;protein_id=UTX06009.1;transl_table=11 CP101611.1 Genbank gene 966363 966527 . + . ID=gene-NM058_04920;Name=spxO;gbkey=Gene;gene=spxO;gene_biotype=protein_coding;locus_tag=NM058_04920 CP101611.1 Protein Homology CDS 966363 966527 . + 0 ID=cds-UTX06010.1;Parent=gene-NM058_04920;Dbxref=NCBI_GP:UTX06010.1;Name=UTX06010.1;gbkey=CDS;gene=spxO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097785.1;locus_tag=NM058_04920;product=anti-adapter protein SpxO;protein_id=UTX06010.1;transl_table=11 CP101611.1 Genbank gene 966556 967911 . - . ID=gene-NM058_04925;Name=cssS;gbkey=Gene;gene=cssS;gene_biotype=protein_coding;locus_tag=NM058_04925 CP101611.1 Protein Homology CDS 966556 967911 . - 0 ID=cds-UTX06011.1;Parent=gene-NM058_04925;Dbxref=NCBI_GP:UTX06011.1;Name=UTX06011.1;gbkey=CDS;gene=cssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391182.2;locus_tag=NM058_04925;product=secretion stress-responsive two-component system sensor histidine kinase CssS;protein_id=UTX06011.1;transl_table=11 CP101611.1 Genbank gene 967908 968585 . - . ID=gene-NM058_04930;Name=cssR;gbkey=Gene;gene=cssR;gene_biotype=protein_coding;locus_tag=NM058_04930 CP101611.1 Protein Homology CDS 967908 968585 . - 0 ID=cds-UTX06012.1;Parent=gene-NM058_04930;Dbxref=NCBI_GP:UTX06012.1;Name=UTX06012.1;gbkey=CDS;gene=cssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391181.1;locus_tag=NM058_04930;product=secretion stress-responsive two-component system response regulator CssR;protein_id=UTX06012.1;transl_table=11 CP101611.1 Genbank gene 968863 970239 . + . ID=gene-NM058_04935;Name=htrB;gbkey=Gene;gene=htrB;gene_biotype=protein_coding;gene_synonym=yvtA;locus_tag=NM058_04935 CP101611.1 Protein Homology CDS 968863 970239 . + 0 ID=cds-UTX06013.1;Parent=gene-NM058_04935;Dbxref=NCBI_GP:UTX06013.1;Name=UTX06013.1;gbkey=CDS;gene=htrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391180.2;locus_tag=NM058_04935;product=serine protease Do-like protein HtrB;protein_id=UTX06013.1;transl_table=11 CP101611.1 Genbank gene 970281 970742 . - . ID=gene-NM058_04940;Name=mrgA;gbkey=Gene;gene=mrgA;gene_biotype=protein_coding;locus_tag=NM058_04940 CP101611.1 Protein Homology CDS 970281 970742 . - 0 ID=cds-UTX06014.1;Parent=gene-NM058_04940;Dbxref=NCBI_GP:UTX06014.1;Name=UTX06014.1;gbkey=CDS;gene=mrgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391178.1;locus_tag=NM058_04940;product=metalloregulation DNA-binding stress protein MgrA;protein_id=UTX06014.1;transl_table=11 CP101611.1 Genbank gene 970820 971674 . - . ID=gene-NM058_04945;Name=NM058_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04945 CP101611.1 Protein Homology CDS 970820 971674 . - 0 ID=cds-UTX06967.1;Parent=gene-NM058_04945;Dbxref=NCBI_GP:UTX06967.1;Name=UTX06967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014115102.1;locus_tag=NM058_04945;product=oxidoreductase;protein_id=UTX06967.1;transl_table=11 CP101611.1 Genbank gene 971808 973604 . + . ID=gene-NM058_04950;Name=NM058_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04950 CP101611.1 Protein Homology CDS 971808 973604 . + 0 ID=cds-UTX06015.1;Parent=gene-NM058_04950;Dbxref=NCBI_GP:UTX06015.1;Name=UTX06015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014477936.1;locus_tag=NM058_04950;product=M3 family oligoendopeptidase;protein_id=UTX06015.1;transl_table=11 CP101611.1 Genbank gene 973712 974149 . + . ID=gene-NM058_04955;Name=NM058_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04955 CP101611.1 Protein Homology CDS 973712 974149 . + 0 ID=cds-UTX06016.1;Parent=gene-NM058_04955;Dbxref=NCBI_GP:UTX06016.1;Name=UTX06016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391174.1;locus_tag=NM058_04955;product=YusW family protein;protein_id=UTX06016.1;transl_table=11 CP101611.1 Genbank gene 974367 975194 . + . ID=gene-NM058_04960;Name=NM058_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04960 CP101611.1 Protein Homology CDS 974367 975194 . + 0 ID=cds-UTX06968.1;Parent=gene-NM058_04960;Dbxref=NCBI_GP:UTX06968.1;Name=UTX06968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391173.1;locus_tag=NM058_04960;product=ABC transporter ATP-binding protein;protein_id=UTX06968.1;transl_table=11 CP101611.1 Genbank gene 975222 975509 . + . ID=gene-NM058_04965;Name=NM058_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04965 CP101611.1 Protein Homology CDS 975222 975509 . + 0 ID=cds-UTX06969.1;Parent=gene-NM058_04965;Dbxref=NCBI_GP:UTX06969.1;Name=UTX06969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391172.1;locus_tag=NM058_04965;product=YusU family protein;protein_id=UTX06969.1;transl_table=11 CP101611.1 Genbank gene 975530 976414 . - . ID=gene-NM058_04970;Name=NM058_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04970 CP101611.1 Protein Homology CDS 975530 976414 . - 0 ID=cds-UTX06017.1;Parent=gene-NM058_04970;Dbxref=NCBI_GP:UTX06017.1;Name=UTX06017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391171.1;locus_tag=NM058_04970;product=LysR family transcriptional regulator;protein_id=UTX06017.1;transl_table=11 CP101611.1 Genbank gene 976548 977288 . + . ID=gene-NM058_04975;Name=NM058_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04975 CP101611.1 Protein Homology CDS 976548 977288 . + 0 ID=cds-UTX06018.1;Parent=gene-NM058_04975;Dbxref=NCBI_GP:UTX06018.1;Name=UTX06018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259424.1;locus_tag=NM058_04975;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=UTX06018.1;transl_table=11 CP101611.1 Genbank gene 977306 977689 . + . ID=gene-NM058_04980;Name=NM058_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04980 CP101611.1 Protein Homology CDS 977306 977689 . + 0 ID=cds-UTX06019.1;Parent=gene-NM058_04980;Dbxref=NCBI_GP:UTX06019.1;Name=UTX06019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391168.1;locus_tag=NM058_04980;product=tautomerase family protein;protein_id=UTX06019.1;transl_table=11 CP101611.1 Genbank pseudogene 977725 979340 . - . ID=gene-NM058_04985;Name=mdtP;gbkey=Gene;gene=mdtP;gene_biotype=pseudogene;locus_tag=NM058_04985;pseudo=true CP101611.1 Protein Homology CDS 977725 979340 . - 0 ID=cds-NM058_04985;Parent=gene-NM058_04985;Note=frameshifted;gbkey=CDS;gene=mdtP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019715663.1;locus_tag=NM058_04985;product=multidrug efflux MFS transporter MdtP;pseudo=true;transl_table=11 CP101611.1 Genbank gene 979342 979812 . - . ID=gene-NM058_04990;Name=mdtR;gbkey=Gene;gene=mdtR;gene_biotype=protein_coding;locus_tag=NM058_04990 CP101611.1 Protein Homology CDS 979342 979812 . - 0 ID=cds-UTX06020.1;Parent=gene-NM058_04990;Dbxref=NCBI_GP:UTX06020.1;Name=UTX06020.1;gbkey=CDS;gene=mdtR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391166.1;locus_tag=NM058_04990;product=MarR family transcriptional regulator MdtR;protein_id=UTX06020.1;transl_table=11 CP101611.1 Genbank gene 979971 980303 . - . ID=gene-NM058_04995;Name=NM058_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_04995 CP101611.1 Protein Homology CDS 979971 980303 . - 0 ID=cds-UTX06021.1;Parent=gene-NM058_04995;Dbxref=NCBI_GP:UTX06021.1;Name=UTX06021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391165.1;locus_tag=NM058_04995;product=spore coat protein;protein_id=UTX06021.1;transl_table=11 CP101611.1 Genbank gene 980316 980561 . - . ID=gene-NM058_05000;Name=NM058_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05000 CP101611.1 Protein Homology CDS 980316 980561 . - 0 ID=cds-UTX06022.1;Parent=gene-NM058_05000;Dbxref=NCBI_GP:UTX06022.1;Name=UTX06022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097784.1;locus_tag=NM058_05000;product=hypothetical protein;protein_id=UTX06022.1;transl_table=11 CP101611.1 Genbank gene 980657 981565 . + . ID=gene-NM058_05005;Name=NM058_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05005 CP101611.1 Protein Homology CDS 980657 981565 . + 0 ID=cds-UTX06023.1;Parent=gene-NM058_05005;Dbxref=NCBI_GP:UTX06023.1;Name=UTX06023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391164.1;locus_tag=NM058_05005;product=proline dehydrogenase;protein_id=UTX06023.1;transl_table=11 CP101611.1 Genbank pseudogene 981590 981727 . - . ID=gene-NM058_05010;Name=NM058_05010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05010;pseudo=true CP101611.1 Protein Homology CDS 981590 981727 . - 0 ID=cds-NM058_05010;Parent=gene-NM058_05010;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097783.1;locus_tag=NM058_05010;product=YuzL family protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 981909 984277 . + . ID=gene-NM058_05015;Name=NM058_05015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05015;pseudo=true CP101611.1 Protein Homology CDS 981909 984277 . + 0 ID=cds-NM058_05015;Parent=gene-NM058_05015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391163.2;locus_tag=NM058_05015;product=3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 984288 985463 . + . ID=gene-NM058_05020;Name=NM058_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05020 CP101611.1 Protein Homology CDS 984288 985463 . + 0 ID=cds-UTX06024.1;Parent=gene-NM058_05020;Dbxref=NCBI_GP:UTX06024.1;Name=UTX06024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391162.1;locus_tag=NM058_05020;product=acetyl-CoA C-acetyltransferase;protein_id=UTX06024.1;transl_table=11 CP101611.1 Genbank pseudogene 985478 987261 . + . ID=gene-NM058_05025;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=pseudogene;locus_tag=NM058_05025;pseudo=true CP101611.1 Protein Homology CDS 985478 987261 . + 0 ID=cds-NM058_05025;Parent=gene-NM058_05025;Note=frameshifted;gbkey=CDS;gene=fadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391161.1;locus_tag=NM058_05025;product=acyl-CoA dehydrogenase FadE;pseudo=true;transl_table=11 CP101611.1 Genbank gene 987370 987726 . + . ID=gene-NM058_05030;Name=NM058_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05030 CP101611.1 Protein Homology CDS 987370 987726 . + 0 ID=cds-UTX06025.1;Parent=gene-NM058_05030;Dbxref=NCBI_GP:UTX06025.1;Name=UTX06025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391160.1;locus_tag=NM058_05030;product=arsenate reductase family protein;protein_id=UTX06025.1;transl_table=11 CP101611.1 Genbank gene 987793 988176 . + . ID=gene-NM058_05035;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=NM058_05035 CP101611.1 Protein Homology CDS 987793 988176 . + 0 ID=cds-UTX06026.1;Parent=gene-NM058_05035;Dbxref=NCBI_GP:UTX06026.1;Name=UTX06026.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391159.1;locus_tag=NM058_05035;product=glycine cleavage system protein GcvH;protein_id=UTX06026.1;transl_table=11 CP101611.1 Genbank gene 988232 988468 . + . ID=gene-NM058_05040;Name=NM058_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05040 CP101611.1 Protein Homology CDS 988232 988468 . + 0 ID=cds-UTX06027.1;Parent=gene-NM058_05040;Dbxref=NCBI_GP:UTX06027.1;Name=UTX06027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391158.1;locus_tag=NM058_05040;product=YusG family protein;protein_id=UTX06027.1;transl_table=11 CP101611.1 Genbank gene 988546 988908 . + . ID=gene-NM058_05045;Name=NM058_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05045 CP101611.1 Protein Homology CDS 988546 988908 . + 0 ID=cds-UTX06970.1;Parent=gene-NM058_05045;Dbxref=NCBI_GP:UTX06970.1;Name=UTX06970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015483668.1;locus_tag=NM058_05045;product=toprim domain-containing protein;protein_id=UTX06970.1;transl_table=11 CP101611.1 Genbank gene 988910 989230 . + . ID=gene-NM058_05050;Name=NM058_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05050 CP101611.1 Protein Homology CDS 988910 989230 . + 0 ID=cds-UTX06028.1;Parent=gene-NM058_05050;Dbxref=NCBI_GP:UTX06028.1;Name=UTX06028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391156.1;locus_tag=NM058_05050;product=thioredoxin family protein;protein_id=UTX06028.1;transl_table=11 CP101611.1 Genbank gene 989338 989682 . + . ID=gene-NM058_05055;Name=NM058_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05055 CP101611.1 Protein Homology CDS 989338 989682 . + 0 ID=cds-UTX06029.1;Parent=gene-NM058_05055;Dbxref=NCBI_GP:UTX06029.1;Name=UTX06029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391155.1;locus_tag=NM058_05055;product=SCP2 sterol-binding domain-containing protein;protein_id=UTX06029.1;transl_table=11 CP101611.1 cmsearch riboswitch 989797 989903 . + . ID=id-CP101611.1:989797..989903;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 990009 991034 . + . ID=gene-NM058_05060;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=NM058_05060 CP101611.1 Protein Homology CDS 990009 991034 . + 0 ID=cds-UTX06030.1;Parent=gene-NM058_05060;Dbxref=NCBI_GP:UTX06030.1;Name=UTX06030.1;gbkey=CDS;gene=metN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391154.1;locus_tag=NM058_05060;product=methionine ABC transporter ATP-binding protein MetN;protein_id=UTX06030.1;transl_table=11 CP101611.1 Genbank gene 991027 991695 . + . ID=gene-NM058_05065;Name=metP;gbkey=Gene;gene=metP;gene_biotype=protein_coding;locus_tag=NM058_05065 CP101611.1 Protein Homology CDS 991027 991695 . + 0 ID=cds-UTX06031.1;Parent=gene-NM058_05065;Dbxref=NCBI_GP:UTX06031.1;Name=UTX06031.1;gbkey=CDS;gene=metP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391153.1;locus_tag=NM058_05065;product=methionine ABC transporter permease MetP;protein_id=UTX06031.1;transl_table=11 CP101611.1 Genbank gene 991709 992533 . + . ID=gene-NM058_05070;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=NM058_05070 CP101611.1 Protein Homology CDS 991709 992533 . + 0 ID=cds-UTX06032.1;Parent=gene-NM058_05070;Dbxref=NCBI_GP:UTX06032.1;Name=UTX06032.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391152.1;locus_tag=NM058_05070;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=UTX06032.1;transl_table=11 CP101611.1 Genbank gene 992617 992994 . + . ID=gene-NM058_05075;Name=NM058_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05075 CP101611.1 Protein Homology CDS 992617 992994 . + 0 ID=cds-UTX06033.1;Parent=gene-NM058_05075;Dbxref=NCBI_GP:UTX06033.1;Name=UTX06033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391151.1;locus_tag=NM058_05075;product=carboxymuconolactone decarboxylase family protein;protein_id=UTX06033.1;transl_table=11 CP101611.1 Genbank gene 993187 993324 . + . ID=gene-NM058_05080;Name=NM058_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05080 CP101611.1 Protein Homology CDS 993187 993324 . + 0 ID=cds-UTX06034.1;Parent=gene-NM058_05080;Dbxref=NCBI_GP:UTX06034.1;Name=UTX06034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097782.1;locus_tag=NM058_05080;product=hypothetical protein;protein_id=UTX06034.1;transl_table=11 CP101611.1 Genbank gene 993517 994302 . + . ID=gene-NM058_05085;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=NM058_05085 CP101611.1 Protein Homology CDS 993517 994302 . + 0 ID=cds-UTX06035.1;Parent=gene-NM058_05085;Dbxref=NCBI_GP:UTX06035.1;Name=UTX06035.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391150.1;locus_tag=NM058_05085;product=Fe-S cluster assembly ATPase SufC;protein_id=UTX06035.1;transl_table=11 CP101611.1 Genbank gene 994320 995633 . + . ID=gene-NM058_05090;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=NM058_05090 CP101611.1 Protein Homology CDS 994320 995633 . + 0 ID=cds-UTX06036.1;Parent=gene-NM058_05090;Dbxref=NCBI_GP:UTX06036.1;Name=UTX06036.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufD;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391149.1;locus_tag=NM058_05090;product=Fe-S cluster assembly protein SufD;protein_id=UTX06036.1;transl_table=11 CP101611.1 Genbank pseudogene 995633 996851 . + . ID=gene-NM058_05095;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=pseudogene;locus_tag=NM058_05095;pseudo=true CP101611.1 Protein Homology CDS 995633 996851 . + 0 ID=cds-NM058_05095;Parent=gene-NM058_05095;Note=frameshifted;gbkey=CDS;gene=sufS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391148.1;locus_tag=NM058_05095;product=cysteine desulfurase SufS;pseudo=true;transl_table=11 CP101611.1 Genbank gene 996841 997284 . + . ID=gene-NM058_05100;Name=sufU;gbkey=Gene;gene=sufU;gene_biotype=protein_coding;gene_synonym=sufA;locus_tag=NM058_05100 CP101611.1 Protein Homology CDS 996841 997284 . + 0 ID=cds-UTX06037.1;Parent=gene-NM058_05100;Dbxref=NCBI_GP:UTX06037.1;Name=UTX06037.1;gbkey=CDS;gene=sufU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391147.1;locus_tag=NM058_05100;product=iron-sulfur cluster assembly scaffold protein SufU;protein_id=UTX06037.1;transl_table=11 CP101611.1 Genbank gene 997305 998702 . + . ID=gene-NM058_05105;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=NM058_05105 CP101611.1 Protein Homology CDS 997305 998702 . + 0 ID=cds-UTX06038.1;Parent=gene-NM058_05105;Dbxref=NCBI_GP:UTX06038.1;Name=UTX06038.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufB;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391146.1;locus_tag=NM058_05105;product=Fe-S cluster assembly protein SufB;protein_id=UTX06038.1;transl_table=11 CP101611.1 Genbank gene 999163 999441 . + . ID=gene-NM058_05110;Name=NM058_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05110 CP101611.1 Protein Homology CDS 999163 999441 . + 0 ID=cds-UTX06971.1;Parent=gene-NM058_05110;Dbxref=NCBI_GP:UTX06971.1;Name=UTX06971.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097781.1;locus_tag=NM058_05110;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=UTX06971.1;transl_table=11 CP101611.1 Genbank gene 999651 999935 . + . ID=gene-NM058_05115;Name=NM058_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05115 CP101611.1 Protein Homology CDS 999651 999935 . + 0 ID=cds-UTX06039.1;Parent=gene-NM058_05115;Dbxref=NCBI_GP:UTX06039.1;Name=UTX06039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015384585.1;locus_tag=NM058_05115;product=VOC family protein;protein_id=UTX06039.1;transl_table=11 CP101611.1 Genbank gene 1000118 1000390 . - . ID=gene-NM058_05120;Name=NM058_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05120 CP101611.1 Protein Homology CDS 1000118 1000390 . - 0 ID=cds-UTX06040.1;Parent=gene-NM058_05120;Dbxref=NCBI_GP:UTX06040.1;Name=UTX06040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003222817.1;locus_tag=NM058_05120;product=hypothetical protein;protein_id=UTX06040.1;transl_table=11 CP101611.1 Genbank gene 1000390 1000539 . - . ID=gene-NM058_05125;Name=NM058_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05125 CP101611.1 Protein Homology CDS 1000390 1000539 . - 0 ID=cds-UTX06041.1;Parent=gene-NM058_05125;Dbxref=NCBI_GP:UTX06041.1;Name=UTX06041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054592.1;locus_tag=NM058_05125;product=spore protein;protein_id=UTX06041.1;transl_table=11 CP101611.1 Genbank gene 1000698 1001819 . + . ID=gene-NM058_05130;Name=NM058_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05130 CP101611.1 Protein Homology CDS 1000698 1001819 . + 0 ID=cds-UTX06042.1;Parent=gene-NM058_05130;Dbxref=NCBI_GP:UTX06042.1;Name=UTX06042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014115074.1;locus_tag=NM058_05130;product=FAD-binding oxidoreductase;protein_id=UTX06042.1;transl_table=11 CP101611.1 Genbank gene 1001915 1002289 . + . ID=gene-NM058_05135;Name=NM058_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05135 CP101611.1 Protein Homology CDS 1001915 1002289 . + 0 ID=cds-UTX06043.1;Parent=gene-NM058_05135;Dbxref=NCBI_GP:UTX06043.1;Name=UTX06043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391142.1;locus_tag=NM058_05135;product=nucleotide excision repair endonuclease;protein_id=UTX06043.1;transl_table=11 CP101611.1 Genbank gene 1002504 1003490 . + . ID=gene-NM058_05140;Name=frlB;gbkey=Gene;gene=frlB;gene_biotype=protein_coding;locus_tag=NM058_05140 CP101611.1 Protein Homology CDS 1002504 1003490 . + 0 ID=cds-UTX06044.1;Parent=gene-NM058_05140;Dbxref=NCBI_GP:UTX06044.1;Name=UTX06044.1;gbkey=CDS;gene=frlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391141.1;locus_tag=NM058_05140;product=fructosamine deglycase FrlB;protein_id=UTX06044.1;transl_table=11 CP101611.1 Genbank gene 1003571 1004839 . + . ID=gene-NM058_05145;Name=NM058_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05145 CP101611.1 Protein Homology CDS 1003571 1004839 . + 0 ID=cds-UTX06045.1;Parent=gene-NM058_05145;Dbxref=NCBI_GP:UTX06045.1;Name=UTX06045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391140.1;locus_tag=NM058_05145;product=ABC transporter substrate-binding protein;protein_id=UTX06045.1;transl_table=11 CP101611.1 Genbank pseudogene 1004896 1005774 . + . ID=gene-NM058_05150;Name=NM058_05150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05150;pseudo=true CP101611.1 Protein Homology CDS 1004896 1005774 . + 0 ID=cds-NM058_05150;Parent=gene-NM058_05150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391139.1;locus_tag=NM058_05150;product=sugar ABC transporter permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1005778 1006680 . + . ID=gene-NM058_05155;Name=NM058_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05155 CP101611.1 Protein Homology CDS 1005778 1006680 . + 0 ID=cds-UTX06046.1;Parent=gene-NM058_05155;Dbxref=NCBI_GP:UTX06046.1;Name=UTX06046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391138.1;locus_tag=NM058_05155;product=carbohydrate ABC transporter permease;protein_id=UTX06046.1;transl_table=11 CP101611.1 Genbank pseudogene 1006693 1007546 . + . ID=gene-NM058_05160;Name=frlD;gbkey=Gene;gene=frlD;gene_biotype=pseudogene;locus_tag=NM058_05160;pseudo=true CP101611.1 Protein Homology CDS 1006693 1007546 . + 0 ID=cds-NM058_05160;Parent=gene-NM058_05160;Note=frameshifted;gbkey=CDS;gene=frlD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391137.1;locus_tag=NM058_05160;product=fructosamine kinase FrlD;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1007571 1008299 . - . ID=gene-NM058_05165;Name=frlR;gbkey=Gene;gene=frlR;gene_biotype=protein_coding;locus_tag=NM058_05165 CP101611.1 Protein Homology CDS 1007571 1008299 . - 0 ID=cds-UTX06047.1;Parent=gene-NM058_05165;Dbxref=NCBI_GP:UTX06047.1;Name=UTX06047.1;gbkey=CDS;gene=frlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391136.3;locus_tag=NM058_05165;product=transcriptional regulator FrlR;protein_id=UTX06047.1;transl_table=11 CP101611.1 Genbank gene 1008481 1009584 . + . ID=gene-NM058_05170;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=NM058_05170 CP101611.1 Protein Homology CDS 1008481 1009584 . + 0 ID=cds-UTX06048.1;Parent=gene-NM058_05170;Dbxref=NCBI_GP:UTX06048.1;Name=UTX06048.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391135.1;locus_tag=NM058_05170;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=UTX06048.1;transl_table=11 CP101611.1 Genbank gene 1009617 1010483 . - . ID=gene-NM058_05175;Name=NM058_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05175 CP101611.1 Protein Homology CDS 1009617 1010483 . - 0 ID=cds-UTX06049.1;Parent=gene-NM058_05175;Dbxref=NCBI_GP:UTX06049.1;Name=UTX06049.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391134.1;locus_tag=NM058_05175;product=endonuclease;protein_id=UTX06049.1;transl_table=11 CP101611.1 Genbank gene 1010578 1010934 . - . ID=gene-NM058_05180;Name=NM058_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05180 CP101611.1 GeneMarkS-2+ CDS 1010578 1010934 . - 0 ID=cds-UTX06050.1;Parent=gene-NM058_05180;Dbxref=NCBI_GP:UTX06050.1;Name=UTX06050.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_05180;product=glycosyl transferase;protein_id=UTX06050.1;transl_table=11 CP101611.1 Genbank pseudogene 1011216 1012453 . + . ID=gene-NM058_05185;Name=allC;gbkey=Gene;gene=allC;gene_biotype=pseudogene;locus_tag=NM058_05185;pseudo=true CP101611.1 Protein Homology CDS 1011216 1012453 . + 0 ID=cds-NM058_05185;Parent=gene-NM058_05185;Note=frameshifted;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391133.1;locus_tag=NM058_05185;product=allantoate deiminase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1012470 1013720 . + . ID=gene-NM058_05190;Name=pucG;gbkey=Gene;gene=pucG;gene_biotype=protein_coding;locus_tag=NM058_05190 CP101611.1 Protein Homology CDS 1012470 1013720 . + 0 ID=cds-UTX06051.1;Parent=gene-NM058_05190;Dbxref=NCBI_GP:UTX06051.1;Name=UTX06051.1;gbkey=CDS;gene=pucG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391132.1;locus_tag=NM058_05190;product=(S)-ureidoglycine--glyoxylate transaminase;protein_id=UTX06051.1;transl_table=11 CP101611.1 Genbank gene 1013951 1014943 . + . ID=gene-NM058_05195;Name=NM058_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05195 CP101611.1 Protein Homology CDS 1013951 1014943 . + 0 ID=cds-UTX06052.1;Parent=gene-NM058_05195;Dbxref=NCBI_GP:UTX06052.1;Name=UTX06052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391131.1;locus_tag=NM058_05195;product=XdhC family protein;protein_id=UTX06052.1;transl_table=11 CP101611.1 Genbank gene 1014940 1015557 . + . ID=gene-NM058_05200;Name=pucB;gbkey=Gene;gene=pucB;gene_biotype=protein_coding;locus_tag=NM058_05200 CP101611.1 Protein Homology CDS 1014940 1015557 . + 0 ID=cds-UTX06053.1;Parent=gene-NM058_05200;Dbxref=NCBI_GP:UTX06053.1;Name=UTX06053.1;gbkey=CDS;gene=pucB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240898.1;locus_tag=NM058_05200;product=xanthine dehydrogenase accessory protein PucB;protein_id=UTX06053.1;transl_table=11 CP101611.1 Genbank gene 1015554 1016387 . + . ID=gene-NM058_05205;Name=pucC;gbkey=Gene;gene=pucC;gene_biotype=protein_coding;locus_tag=NM058_05205 CP101611.1 Protein Homology CDS 1015554 1016387 . + 0 ID=cds-UTX06054.1;Parent=gene-NM058_05205;Dbxref=NCBI_GP:UTX06054.1;Name=UTX06054.1;gbkey=CDS;gene=pucC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391129.1;locus_tag=NM058_05205;product=xanthine dehydrogenase subunit C;protein_id=UTX06054.1;transl_table=11 CP101611.1 Genbank gene 1016388 1018631 . + . ID=gene-NM058_05210;Name=pucD;gbkey=Gene;gene=pucD;gene_biotype=protein_coding;locus_tag=NM058_05210 CP101611.1 Protein Homology CDS 1016388 1018631 . + 0 ID=cds-UTX06055.1;Parent=gene-NM058_05210;Dbxref=NCBI_GP:UTX06055.1;Name=UTX06055.1;Ontology_term=GO:0016491;gbkey=CDS;gene=pucD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391128.1;locus_tag=NM058_05210;product=xanthine dehydrogenase subunit D;protein_id=UTX06055.1;transl_table=11 CP101611.1 Genbank gene 1018622 1019143 . + . ID=gene-NM058_05215;Name=pucE;gbkey=Gene;gene=pucE;gene_biotype=protein_coding;locus_tag=NM058_05215 CP101611.1 Protein Homology CDS 1018622 1019143 . + 0 ID=cds-UTX06056.1;Parent=gene-NM058_05215;Dbxref=NCBI_GP:UTX06056.1;Name=UTX06056.1;gbkey=CDS;gene=pucE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391127.1;locus_tag=NM058_05215;product=xanthine dehydrogenase subunit E;protein_id=UTX06056.1;transl_table=11 CP101611.1 Genbank gene 1019830 1019946 . - . ID=gene-NM058_05220;Name=NM058_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05220 CP101611.1 Protein Homology CDS 1019830 1019946 . - 0 ID=cds-UTX06057.1;Parent=gene-NM058_05220;Dbxref=NCBI_GP:UTX06057.1;Name=UTX06057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014665279.1;locus_tag=NM058_05220;product=YjcZ family sporulation protein;protein_id=UTX06057.1;transl_table=11 CP101611.1 Genbank gene 1020125 1020292 . + . ID=gene-NM058_05225;Name=NM058_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05225 CP101611.1 Protein Homology CDS 1020125 1020292 . + 0 ID=cds-UTX06972.1;Parent=gene-NM058_05225;Dbxref=NCBI_GP:UTX06972.1;Name=UTX06972.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022133.2;locus_tag=NM058_05225;product=phage terminase small subunit-related protein;protein_id=UTX06972.1;transl_table=11 CP101611.1 Genbank gene 1020416 1020832 . + . ID=gene-NM058_05230;Name=NM058_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05230 CP101611.1 Protein Homology CDS 1020416 1020832 . + 0 ID=cds-UTX06058.1;Parent=gene-NM058_05230;Dbxref=NCBI_GP:UTX06058.1;Name=UTX06058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259391.1;locus_tag=NM058_05230;product=hypothetical protein;protein_id=UTX06058.1;transl_table=11 CP101611.1 Genbank gene 1021264 1021362 . - . ID=gene-NM058_05235;Name=NM058_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05235 CP101611.1 Protein Homology CDS 1021264 1021362 . - 0 ID=cds-UTX06059.1;Parent=gene-NM058_05235;Dbxref=NCBI_GP:UTX06059.1;Name=UTX06059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003154022.1;locus_tag=NM058_05235;product=YjcZ family sporulation protein;protein_id=UTX06059.1;transl_table=11 CP101611.1 Genbank gene 1022009 1022296 . + . ID=gene-NM058_05240;Name=NM058_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05240 CP101611.1 Protein Homology CDS 1022009 1022296 . + 0 ID=cds-UTX06060.1;Parent=gene-NM058_05240;Dbxref=NCBI_GP:UTX06060.1;Name=UTX06060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000284732.1;locus_tag=NM058_05240;product=hypothetical protein;protein_id=UTX06060.1;transl_table=11 CP101611.1 Genbank gene 1022460 1022813 . - . ID=gene-NM058_05245;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=NM058_05245 CP101611.1 Protein Homology CDS 1022460 1022813 . - 0 ID=cds-UTX06061.1;Parent=gene-NM058_05245;Dbxref=NCBI_GP:UTX06061.1;Name=UTX06061.1;Ontology_term=GO:0019628;gbkey=CDS;gene=uraH;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391126.2;locus_tag=NM058_05245;product=hydroxyisourate hydrolase;protein_id=UTX06061.1;transl_table=11 CP101611.1 Genbank pseudogene 1022813 1024294 . - . ID=gene-NM058_05250;Name=pucL;gbkey=Gene;gene=pucL;gene_biotype=pseudogene;locus_tag=NM058_05250;pseudo=true CP101611.1 Protein Homology CDS 1022813 1024294 . - 0 ID=cds-NM058_05250;Parent=gene-NM058_05250;Note=frameshifted;Ontology_term=GO:0019628,GO:0004846;gbkey=CDS;gene=pucL;go_function=urate oxidase activity|0004846||IEA;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391125.1;locus_tag=NM058_05250;product=urate oxidase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1024307 1025598 . - . ID=gene-NM058_05255;Name=NM058_05255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05255;pseudo=true CP101611.1 Protein Homology CDS 1024307 1025598 . - 0 ID=cds-NM058_05255;Parent=gene-NM058_05255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391124.1;locus_tag=NM058_05255;product=purine permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1025605 1026939 . - . ID=gene-NM058_05260;Name=pucJ;gbkey=Gene;gene=pucJ;gene_biotype=protein_coding;locus_tag=NM058_05260 CP101611.1 Protein Homology CDS 1025605 1026939 . - 0 ID=cds-UTX06062.1;Parent=gene-NM058_05260;Dbxref=NCBI_GP:UTX06062.1;Name=UTX06062.1;gbkey=CDS;gene=pucJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391123.1;locus_tag=NM058_05260;product=uric acid permease PucJ;protein_id=UTX06062.1;transl_table=11 CP101611.1 Genbank gene 1027086 1028681 . - . ID=gene-NM058_05265;Name=pucR;gbkey=Gene;gene=pucR;gene_biotype=protein_coding;locus_tag=NM058_05265 CP101611.1 Protein Homology CDS 1027086 1028681 . - 0 ID=cds-UTX06063.1;Parent=gene-NM058_05265;Dbxref=NCBI_GP:UTX06063.1;Name=UTX06063.1;gbkey=CDS;gene=pucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391122.1;locus_tag=NM058_05265;product=purine catabolism transcriptional regulator PucR;protein_id=UTX06063.1;transl_table=11 CP101611.1 Genbank gene 1028857 1030197 . + . ID=gene-NM058_05270;Name=NM058_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05270 CP101611.1 Protein Homology CDS 1028857 1030197 . + 0 ID=cds-UTX06064.1;Parent=gene-NM058_05270;Dbxref=NCBI_GP:UTX06064.1;Name=UTX06064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391121.1;locus_tag=NM058_05270;product=allantoinase;protein_id=UTX06064.1;transl_table=11 CP101611.1 Genbank gene 1030296 1030643 . + . ID=gene-NM058_05275;Name=NM058_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05275 CP101611.1 Protein Homology CDS 1030296 1030643 . + 0 ID=cds-UTX06065.1;Parent=gene-NM058_05275;Dbxref=NCBI_GP:UTX06065.1;Name=UTX06065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391120.1;locus_tag=NM058_05275;product=hypothetical protein;protein_id=UTX06065.1;transl_table=11 CP101611.1 Genbank gene 1030681 1031529 . + . ID=gene-NM058_05280;Name=NM058_05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05280 CP101611.1 Protein Homology CDS 1030681 1031529 . + 0 ID=cds-UTX06973.1;Parent=gene-NM058_05280;Dbxref=NCBI_GP:UTX06973.1;Name=UTX06973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391119.2;locus_tag=NM058_05280;product=DUF72 domain-containing protein;protein_id=UTX06973.1;transl_table=11 CP101611.1 Genbank gene 1031547 1032368 . + . ID=gene-NM058_05285;Name=NM058_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05285 CP101611.1 Protein Homology CDS 1031547 1032368 . + 0 ID=cds-UTX06066.1;Parent=gene-NM058_05285;Dbxref=NCBI_GP:UTX06066.1;Name=UTX06066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391118.1;locus_tag=NM058_05285;product=sulfite exporter TauE/SafE family protein;protein_id=UTX06066.1;transl_table=11 CP101611.1 Genbank gene 1032388 1033776 . + . ID=gene-NM058_05290;Name=NM058_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05290 CP101611.1 Protein Homology CDS 1032388 1033776 . + 0 ID=cds-UTX06067.1;Parent=gene-NM058_05290;Dbxref=NCBI_GP:UTX06067.1;Name=UTX06067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391117.1;locus_tag=NM058_05290;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=UTX06067.1;transl_table=11 CP101611.1 Genbank gene 1033841 1034146 . + . ID=gene-NM058_05295;Name=NM058_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05295 CP101611.1 Protein Homology CDS 1033841 1034146 . + 0 ID=cds-UTX06068.1;Parent=gene-NM058_05295;Dbxref=NCBI_GP:UTX06068.1;Name=UTX06068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391116.1;locus_tag=NM058_05295;product=YunC family protein;protein_id=UTX06068.1;transl_table=11 CP101611.1 Genbank gene 1034215 1034982 . + . ID=gene-NM058_05300;Name=yunB;gbkey=Gene;gene=yunB;gene_biotype=protein_coding;locus_tag=NM058_05300 CP101611.1 Protein Homology CDS 1034215 1034982 . + 0 ID=cds-UTX06069.1;Parent=gene-NM058_05300;Dbxref=NCBI_GP:UTX06069.1;Name=UTX06069.1;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=yunB;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391115.1;locus_tag=NM058_05300;product=sporulation protein YunB;protein_id=UTX06069.1;transl_table=11 CP101611.1 Genbank pseudogene 1035015 1035988 . - . ID=gene-NM058_05305;Name=lytH;gbkey=Gene;gene=lytH;gene_biotype=pseudogene;locus_tag=NM058_05305;pseudo=true CP101611.1 Protein Homology CDS 1035015 1035988 . - 0 ID=cds-NM058_05305;Parent=gene-NM058_05305;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;gene=lytH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391114.2;locus_tag=NM058_05305;product=L-Ala--D-Glu endopeptidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1036214 1037110 . + . ID=gene-NM058_05310;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=NM058_05310 CP101611.1 Protein Homology CDS 1036214 1037110 . + 0 ID=cds-UTX06070.1;Parent=gene-NM058_05310;Dbxref=NCBI_GP:UTX06070.1;Name=UTX06070.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391113.2;locus_tag=NM058_05310;product=lipoyl synthase;protein_id=UTX06070.1;transl_table=11 CP101611.1 Genbank gene 1037126 1037761 . - . ID=gene-NM058_05315;Name=NM058_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05315 CP101611.1 Protein Homology CDS 1037126 1037761 . - 0 ID=cds-UTX06071.1;Parent=gene-NM058_05315;Dbxref=NCBI_GP:UTX06071.1;Name=UTX06071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391112.1;locus_tag=NM058_05315;product=YhcN/YlaJ family sporulation lipoprotein;protein_id=UTX06071.1;transl_table=11 CP101611.1 Genbank gene 1037875 1038150 . + . ID=gene-NM058_05320;Name=NM058_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05320 CP101611.1 Protein Homology CDS 1037875 1038150 . + 0 ID=cds-UTX06072.1;Parent=gene-NM058_05320;Dbxref=NCBI_GP:UTX06072.1;Name=UTX06072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391111.2;locus_tag=NM058_05320;product=YutD family protein;protein_id=UTX06072.1;transl_table=11 CP101611.1 Genbank gene 1038174 1038608 . + . ID=gene-NM058_05325;Name=NM058_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05325 CP101611.1 Protein Homology CDS 1038174 1038608 . + 0 ID=cds-UTX06073.1;Parent=gene-NM058_05325;Dbxref=NCBI_GP:UTX06073.1;Name=UTX06073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391110.1;locus_tag=NM058_05325;product=DUF86 domain-containing protein;protein_id=UTX06073.1;transl_table=11 CP101611.1 Genbank gene 1038626 1039396 . + . ID=gene-NM058_05330;Name=nucF;gbkey=Gene;gene=nucF;gene_biotype=protein_coding;locus_tag=NM058_05330 CP101611.1 Protein Homology CDS 1038626 1039396 . + 0 ID=cds-UTX06074.1;Parent=gene-NM058_05330;Dbxref=NCBI_GP:UTX06074.1;Name=UTX06074.1;gbkey=CDS;gene=nucF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391109.1;locus_tag=NM058_05330;product=5' nucleotidase NucF;protein_id=UTX06074.1;transl_table=11 CP101611.1 Genbank gene 1039422 1039922 . - . ID=gene-NM058_05335;Name=NM058_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05335 CP101611.1 Protein Homology CDS 1039422 1039922 . - 0 ID=cds-UTX06075.1;Parent=gene-NM058_05335;Dbxref=NCBI_GP:UTX06075.1;Name=UTX06075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391108.1;locus_tag=NM058_05335;product=phosphatidylglycerophosphatase A;protein_id=UTX06075.1;transl_table=11 CP101611.1 Genbank gene 1040075 1041094 . + . ID=gene-NM058_05340;Name=cotNH;gbkey=Gene;gene=cotNH;gene_biotype=protein_coding;locus_tag=NM058_05340 CP101611.1 Protein Homology CDS 1040075 1041094 . + 0 ID=cds-UTX06974.1;Parent=gene-NM058_05340;Dbxref=NCBI_GP:UTX06974.1;Name=UTX06974.1;gbkey=CDS;gene=cotNH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017696730.1;locus_tag=NM058_05340;product=spore coat-associated protein CotNH;protein_id=UTX06974.1;transl_table=11 CP101611.1 Genbank gene 1041295 1042596 . + . ID=gene-NM058_05345;Name=NM058_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05345 CP101611.1 Protein Homology CDS 1041295 1042596 . + 0 ID=cds-UTX06076.1;Parent=gene-NM058_05345;Dbxref=NCBI_GP:UTX06076.1;Name=UTX06076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391106.1;locus_tag=NM058_05345;product=homoserine dehydrogenase;protein_id=UTX06076.1;transl_table=11 CP101611.1 Genbank pseudogene 1042596 1043653 . + . ID=gene-NM058_05350;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=pseudogene;locus_tag=NM058_05350;pseudo=true CP101611.1 Protein Homology CDS 1042596 1043653 . + 0 ID=cds-NM058_05350;Parent=gene-NM058_05350;Note=frameshifted;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391105.1;locus_tag=NM058_05350;product=threonine synthase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1043650 1044579 . + . ID=gene-NM058_05355;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=NM058_05355 CP101611.1 Protein Homology CDS 1043650 1044579 . + 0 ID=cds-UTX06077.1;Parent=gene-NM058_05355;Dbxref=NCBI_GP:UTX06077.1;Name=UTX06077.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391104.1;locus_tag=NM058_05355;product=homoserine kinase;protein_id=UTX06077.1;transl_table=11 CP101611.1 Genbank gene 1044688 1046661 . + . ID=gene-NM058_05360;Name=NM058_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05360 CP101611.1 Protein Homology CDS 1044688 1046661 . + 0 ID=cds-UTX06078.1;Parent=gene-NM058_05360;Dbxref=NCBI_GP:UTX06078.1;Name=UTX06078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391103.2;locus_tag=NM058_05360;product=S9 family peptidase;protein_id=UTX06078.1;transl_table=11 CP101611.1 Genbank pseudogene 1046702 1047036 . - . ID=gene-NM058_05365;Name=NM058_05365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05365;pseudo=true CP101611.1 Protein Homology CDS 1046702 1047036 . - 0 ID=cds-NM058_05365;Parent=gene-NM058_05365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391102.1;locus_tag=NM058_05365;product=NifU family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1047124 1047450 . + . ID=gene-NM058_05370;Name=NM058_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05370 CP101611.1 Protein Homology CDS 1047124 1047450 . + 0 ID=cds-UTX06079.1;Parent=gene-NM058_05370;Dbxref=NCBI_GP:UTX06079.1;Name=UTX06079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391101.1;locus_tag=NM058_05370;product=YuzD family protein;protein_id=UTX06079.1;transl_table=11 CP101611.1 Genbank gene 1047476 1048543 . - . ID=gene-NM058_05375;Name=NM058_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05375 CP101611.1 Protein Homology CDS 1047476 1048543 . - 0 ID=cds-UTX06080.1;Parent=gene-NM058_05375;Dbxref=NCBI_GP:UTX06080.1;Name=UTX06080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391100.2;locus_tag=NM058_05375;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=UTX06080.1;transl_table=11 CP101611.1 Genbank gene 1048806 1049042 . + . ID=gene-NM058_05380;Name=NM058_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05380 CP101611.1 Protein Homology CDS 1048806 1049042 . + 0 ID=cds-UTX06081.1;Parent=gene-NM058_05380;Dbxref=NCBI_GP:UTX06081.1;Name=UTX06081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391099.1;locus_tag=NM058_05380;product=YuzB family protein;protein_id=UTX06081.1;transl_table=11 CP101611.1 Genbank pseudogene 1049178 1050389 . + . ID=gene-NM058_05385;Name=NM058_05385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05385;pseudo=true CP101611.1 Protein Homology CDS 1049178 1050389 . + 0 ID=cds-NM058_05385;Parent=gene-NM058_05385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391098.1;locus_tag=NM058_05385;product=NupC/NupG family nucleoside CNT transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1050512 1051366 . + . ID=gene-NM058_05390;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=NM058_05390 CP101611.1 Protein Homology CDS 1050512 1051366 . + 0 ID=cds-UTX06082.1;Parent=gene-NM058_05390;Dbxref=NCBI_GP:UTX06082.1;Name=UTX06082.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391097.1;locus_tag=NM058_05390;product=diaminopimelate epimerase;protein_id=UTX06082.1;transl_table=11 CP101611.1 Genbank pseudogene 1051445 1051806 . + . ID=gene-NM058_05395;Name=NM058_05395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05395;pseudo=true CP101611.1 Protein Homology CDS 1051445 1051806 . + 0 ID=cds-NM058_05395;Parent=gene-NM058_05395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391096.1;locus_tag=NM058_05395;product=iron-sulfur cluster assembly accessory protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1052338 1052856 . + . ID=gene-NM058_05400;Name=NM058_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05400 CP101611.1 Protein Homology CDS 1052338 1052856 . + 0 ID=cds-UTX06083.1;Parent=gene-NM058_05400;Dbxref=NCBI_GP:UTX06083.1;Name=UTX06083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391095.1;locus_tag=NM058_05400;product=GNAT family N-acetyltransferase;protein_id=UTX06083.1;transl_table=11 CP101611.1 Genbank gene 1052879 1053502 . + . ID=gene-NM058_05405;Name=NM058_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05405 CP101611.1 Protein Homology CDS 1052879 1053502 . + 0 ID=cds-UTX06084.1;Parent=gene-NM058_05405;Dbxref=NCBI_GP:UTX06084.1;Name=UTX06084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391094.2;locus_tag=NM058_05405;product=FMN-binding negative transcriptional regulator;protein_id=UTX06084.1;transl_table=11 CP101611.1 Genbank gene 1053606 1054586 . - . ID=gene-NM058_05410;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=NM058_05410 CP101611.1 Protein Homology CDS 1053606 1054586 . - 0 ID=cds-UTX06085.1;Parent=gene-NM058_05410;Dbxref=NCBI_GP:UTX06085.1;Name=UTX06085.1;Ontology_term=GO:0015950,GO:0003920;gbkey=CDS;gene=guaC;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide interconversion|0015950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391093.2;locus_tag=NM058_05410;product=GMP reductase;protein_id=UTX06085.1;transl_table=11 CP101611.1 Genbank gene 1054864 1055004 . + . ID=gene-NM058_05415;Name=NM058_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05415 CP101611.1 Protein Homology CDS 1054864 1055004 . + 0 ID=cds-UTX06086.1;Parent=gene-NM058_05415;Dbxref=NCBI_GP:UTX06086.1;Name=UTX06086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391092.1;locus_tag=NM058_05415;product=hypothetical protein;protein_id=UTX06086.1;transl_table=11 CP101611.1 Genbank gene 1055044 1056042 . - . ID=gene-NM058_05420;Name=yumC;gbkey=Gene;gene=yumC;gene_biotype=protein_coding;locus_tag=NM058_05420 CP101611.1 Protein Homology CDS 1055044 1056042 . - 0 ID=cds-UTX06087.1;Parent=gene-NM058_05420;Dbxref=NCBI_GP:UTX06087.1;Name=UTX06087.1;Ontology_term=GO:0004324;gbkey=CDS;gene=yumC;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391091.2;locus_tag=NM058_05420;product=ferredoxin--NADP reductase 2;protein_id=UTX06087.1;transl_table=11 CP101611.1 Genbank pseudogene 1056374 1057588 . + . ID=gene-NM058_05425;Name=NM058_05425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05425;pseudo=true CP101611.1 Protein Homology CDS 1056374 1057588 . + 0 ID=cds-NM058_05425;Parent=gene-NM058_05425;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391090.1;locus_tag=NM058_05425;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1057766 1057909 . + . ID=gene-NM058_05430;Name=NM058_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05430 CP101611.1 Protein Homology CDS 1057766 1057909 . + 0 ID=cds-UTX06088.1;Parent=gene-NM058_05430;Dbxref=NCBI_GP:UTX06088.1;Name=UTX06088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391089.1;locus_tag=NM058_05430;product=YuiA family protein;protein_id=UTX06088.1;transl_table=11 CP101611.1 Genbank gene 1057962 1058282 . + . ID=gene-NM058_05435;Name=NM058_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05435 CP101611.1 Protein Homology CDS 1057962 1058282 . + 0 ID=cds-UTX06089.1;Parent=gene-NM058_05435;Dbxref=NCBI_GP:UTX06089.1;Name=UTX06089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391088.1;locus_tag=NM058_05435;product=YuiB family protein;protein_id=UTX06089.1;transl_table=11 CP101611.1 Genbank gene 1058386 1059042 . + . ID=gene-NM058_05440;Name=spsC;gbkey=Gene;gene=spsC;gene_biotype=protein_coding;gene_synonym=yuiC;locus_tag=NM058_05440 CP101611.1 Protein Homology CDS 1058386 1059042 . + 0 ID=cds-UTX06090.1;Parent=gene-NM058_05440;Dbxref=NCBI_GP:UTX06090.1;Name=UTX06090.1;gbkey=CDS;gene=spsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391087.1;locus_tag=NM058_05440;product=stationary phase survival protein SpsC;protein_id=UTX06090.1;transl_table=11 CP101611.1 Genbank gene 1059071 1059547 . - . ID=gene-NM058_05445;Name=NM058_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05445 CP101611.1 Protein Homology CDS 1059071 1059547 . - 0 ID=cds-UTX06091.1;Parent=gene-NM058_05445;Dbxref=NCBI_GP:UTX06091.1;Name=UTX06091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391086.1;locus_tag=NM058_05445;product=divergent PAP2 family protein;protein_id=UTX06091.1;transl_table=11 CP101611.1 Genbank pseudogene 1059705 1061205 . + . ID=gene-NM058_05450;Name=NM058_05450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05450;pseudo=true CP101611.1 Protein Homology CDS 1059705 1061205 . + 0 ID=cds-NM058_05450;Parent=gene-NM058_05450;Note=frameshifted;Ontology_term=GO:0006508,GO:0030145,GO:0070006;gbkey=CDS;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391085.1;locus_tag=NM058_05450;product=leucyl aminopeptidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1061349 1062674 . + . ID=gene-NM058_05455;Name=NM058_05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05455 CP101611.1 Protein Homology CDS 1061349 1062674 . + 0 ID=cds-UTX06092.1;Parent=gene-NM058_05455;Dbxref=NCBI_GP:UTX06092.1;Name=UTX06092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391084.1;locus_tag=NM058_05455;product=Na+/H+ antiporter family protein;protein_id=UTX06092.1;transl_table=11 CP101611.1 Genbank gene 1062744 1063346 . - . ID=gene-NM058_05460;Name=NM058_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05460 CP101611.1 Protein Homology CDS 1062744 1063346 . - 0 ID=cds-UTX06093.1;Parent=gene-NM058_05460;Dbxref=NCBI_GP:UTX06093.1;Name=UTX06093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391083.1;locus_tag=NM058_05460;product=biotin transporter BioY;protein_id=UTX06093.1;transl_table=11 CP101611.1 Genbank pseudogene 1063449 1064044 . + . ID=gene-NM058_05465;Name=NM058_05465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05465;pseudo=true CP101611.1 Protein Homology CDS 1063449 1064044 . + 0 ID=cds-NM058_05465;Parent=gene-NM058_05465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391082.1;locus_tag=NM058_05465;product=sulfite oxidase-like oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1064258 1065127 . + . ID=gene-NM058_05470;Name=besA;gbkey=Gene;gene=besA;gene_biotype=protein_coding;locus_tag=NM058_05470 CP101611.1 Protein Homology CDS 1064258 1065127 . + 0 ID=cds-UTX06094.1;Parent=gene-NM058_05470;Dbxref=NCBI_GP:UTX06094.1;Name=UTX06094.1;gbkey=CDS;gene=besA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391081.2;locus_tag=NM058_05470;product=ferri-bacillibactin esterase BesA;protein_id=UTX06094.1;transl_table=11 CP101611.1 Genbank gene 1065320 1066105 . + . ID=gene-NM058_05475;Name=NM058_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05475 CP101611.1 Protein Homology CDS 1065320 1066105 . + 0 ID=cds-UTX06095.1;Parent=gene-NM058_05475;Dbxref=NCBI_GP:UTX06095.1;Name=UTX06095.1;Ontology_term=GO:0008667;gbkey=CDS;go_function=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase activity|0008667||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391080.2;locus_tag=NM058_05475;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase;protein_id=UTX06095.1;transl_table=11 CP101611.1 Genbank gene 1066131 1067327 . + . ID=gene-NM058_05480;Name=dhbC;gbkey=Gene;gene=dhbC;gene_biotype=protein_coding;locus_tag=NM058_05480 CP101611.1 Protein Homology CDS 1066131 1067327 . + 0 ID=cds-UTX06096.1;Parent=gene-NM058_05480;Dbxref=NCBI_GP:UTX06096.1;Name=UTX06096.1;gbkey=CDS;gene=dhbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391079.2;locus_tag=NM058_05480;product=isochorismate synthase DhbC;protein_id=UTX06096.1;transl_table=11 CP101611.1 Genbank gene 1067356 1068975 . + . ID=gene-NM058_05485;Name=NM058_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05485 CP101611.1 Protein Homology CDS 1067356 1068975 . + 0 ID=cds-UTX06097.1;Parent=gene-NM058_05485;Dbxref=NCBI_GP:UTX06097.1;Name=UTX06097.1;Ontology_term=GO:0019290,GO:0008668;gbkey=CDS;go_function=(2%2C3-dihydroxybenzoyl)adenylate synthase activity|0008668||IEA;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391078.1;locus_tag=NM058_05485;product=(2%2C3-dihydroxybenzoyl)adenylate synthase;protein_id=UTX06097.1;transl_table=11 CP101611.1 Genbank gene 1069003 1069938 . + . ID=gene-NM058_05490;Name=NM058_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05490 CP101611.1 Protein Homology CDS 1069003 1069938 . + 0 ID=cds-UTX06098.1;Parent=gene-NM058_05490;Dbxref=NCBI_GP:UTX06098.1;Name=UTX06098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391077.1;locus_tag=NM058_05490;product=isochorismatase;protein_id=UTX06098.1;transl_table=11 CP101611.1 Genbank pseudogene 1069958 1077093 . + . ID=gene-NM058_05495;Name=dhbF;gbkey=Gene;gene=dhbF;gene_biotype=pseudogene;locus_tag=NM058_05495;pseudo=true CP101611.1 Protein Homology CDS 1069958 1077093 . + 0 ID=cds-NM058_05495;Parent=gene-NM058_05495;Note=frameshifted;gbkey=CDS;gene=dhbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391076.3;locus_tag=NM058_05495;product=non-ribosomal peptide synthetase DhbF;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1077108 1077317 . + . ID=gene-NM058_05500;Name=NM058_05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05500 CP101611.1 Protein Homology CDS 1077108 1077317 . + 0 ID=cds-UTX06099.1;Parent=gene-NM058_05500;Dbxref=NCBI_GP:UTX06099.1;Name=UTX06099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097779.1;locus_tag=NM058_05500;product=MbtH family protein;protein_id=UTX06099.1;transl_table=11 CP101611.1 Genbank gene 1077361 1078038 . - . ID=gene-NM058_05505;Name=NM058_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05505 CP101611.1 Protein Homology CDS 1077361 1078038 . - 0 ID=cds-UTX06100.1;Parent=gene-NM058_05505;Dbxref=NCBI_GP:UTX06100.1;Name=UTX06100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391073.2;locus_tag=NM058_05505;product=YukJ family protein;protein_id=UTX06100.1;transl_table=11 CP101611.1 Genbank gene 1078151 1079287 . - . ID=gene-NM058_05510;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=NM058_05510 CP101611.1 Protein Homology CDS 1078151 1079287 . - 0 ID=cds-UTX06101.1;Parent=gene-NM058_05510;Dbxref=NCBI_GP:UTX06101.1;Name=UTX06101.1;Ontology_term=GO:0006522,GO:0000286,GO:0005737;gbkey=CDS;gene=ald;go_component=cytoplasm|0005737||IEA;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391071.1;locus_tag=NM058_05510;product=alanine dehydrogenase;protein_id=UTX06101.1;transl_table=11 CP101611.1 Genbank gene 1079389 1080618 . - . ID=gene-NM058_05515;Name=adeR;gbkey=Gene;gene=adeR;gene_biotype=protein_coding;locus_tag=NM058_05515 CP101611.1 Protein Homology CDS 1079389 1080618 . - 0 ID=cds-UTX06102.1;Parent=gene-NM058_05515;Dbxref=NCBI_GP:UTX06102.1;Name=UTX06102.1;gbkey=CDS;gene=adeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391070.2;locus_tag=NM058_05515;product=sporulation transcriptional activator AdeR;protein_id=UTX06102.1;transl_table=11 CP101611.1 Genbank gene 1081186 1081479 . + . ID=gene-NM058_05520;Name=NM058_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05520 CP101611.1 Protein Homology CDS 1081186 1081479 . + 0 ID=cds-UTX06103.1;Parent=gene-NM058_05520;Dbxref=NCBI_GP:UTX06103.1;Name=UTX06103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391069.2;locus_tag=NM058_05520;product=WXG100 family type VII secretion target;protein_id=UTX06103.1;transl_table=11 CP101611.1 Genbank gene 1081550 1081789 . + . ID=gene-NM058_05525;Name=yukD;gbkey=Gene;gene=yukD;gene_biotype=protein_coding;locus_tag=NM058_05525 CP101611.1 Protein Homology CDS 1081550 1081789 . + 0 ID=cds-UTX06104.1;Parent=gene-NM058_05525;Dbxref=NCBI_GP:UTX06104.1;Name=UTX06104.1;gbkey=CDS;gene=yukD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391068.1;locus_tag=NM058_05525;product=ESX secretion system protein YukD;protein_id=UTX06104.1;transl_table=11 CP101611.1 Genbank pseudogene 1081804 1083148 . + . ID=gene-NM058_05530;Name=essB;gbkey=Gene;gene=essB;gene_biotype=pseudogene;locus_tag=NM058_05530;pseudo=true CP101611.1 Protein Homology CDS 1081804 1083148 . + 0 ID=cds-NM058_05530;Parent=gene-NM058_05530;Note=frameshifted;Ontology_term=GO:0009306,GO:0003674;gbkey=CDS;gene=essB;go_function=molecular_function|0003674||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391067.1;locus_tag=NM058_05530;product=type VII secretion protein EssB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1083209 1087696 . + . ID=gene-NM058_05535;Name=essC;gbkey=Gene;gene=essC;gene_biotype=protein_coding;locus_tag=NM058_05535 CP101611.1 Protein Homology CDS 1083209 1087696 . + 0 ID=cds-UTX06105.1;Parent=gene-NM058_05535;Dbxref=NCBI_GP:UTX06105.1;Name=UTX06105.1;Ontology_term=GO:0009306,GO:0003674;gbkey=CDS;gene=essC;go_function=molecular_function|0003674||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391066.2;locus_tag=NM058_05535;product=type VII secretion protein EssC;protein_id=UTX06105.1;transl_table=11 CP101611.1 Genbank pseudogene 1087693 1089068 . + . ID=gene-NM058_05540;Name=esaA;gbkey=Gene;gene=esaA;gene_biotype=pseudogene;locus_tag=NM058_05540;pseudo=true CP101611.1 Protein Homology CDS 1087693 1089068 . + 0 ID=cds-NM058_05540;Parent=gene-NM058_05540;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0016021;gbkey=CDS;gene=esaA;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391064.1;locus_tag=NM058_05540;product=type VII secretion protein EsaA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1089534 1090934 . + . ID=gene-NM058_05545;Name=NM058_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05545 CP101611.1 GeneMarkS-2+ CDS 1089534 1090934 . + 0 ID=cds-UTX07130.1;Parent=gene-NM058_05545;Dbxref=NCBI_GP:UTX07130.1;Name=UTX07130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_05545;product=hypothetical protein;protein_id=UTX07130.1;transl_table=11 CP101611.1 Genbank gene 1090966 1091421 . + . ID=gene-NM058_05550;Name=essA;gbkey=Gene;gene=essA;gene_biotype=protein_coding;locus_tag=NM058_05550 CP101611.1 Protein Homology CDS 1090966 1091421 . + 0 ID=cds-UTX06975.1;Parent=gene-NM058_05550;Dbxref=NCBI_GP:UTX06975.1;Name=UTX06975.1;Ontology_term=GO:0009306,GO:0003674;gbkey=CDS;gene=essA;go_function=molecular_function|0003674||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391063.1;locus_tag=NM058_05550;product=type VII secretion protein EssA;protein_id=UTX06975.1;transl_table=11 CP101611.1 Genbank gene 1091485 1092216 . + . ID=gene-NM058_05555;Name=NM058_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05555 CP101611.1 Protein Homology CDS 1091485 1092216 . + 0 ID=cds-UTX06106.1;Parent=gene-NM058_05555;Dbxref=NCBI_GP:UTX06106.1;Name=UTX06106.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391062.1;locus_tag=NM058_05555;product=(S)-benzoin forming benzil reductase;protein_id=UTX06106.1;transl_table=11 CP101611.1 Genbank gene 1092411 1092941 . + . ID=gene-NM058_05560;Name=NM058_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05560 CP101611.1 Protein Homology CDS 1092411 1092941 . + 0 ID=cds-UTX06107.1;Parent=gene-NM058_05560;Dbxref=NCBI_GP:UTX06107.1;Name=UTX06107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391061.1;locus_tag=NM058_05560;product=HD domain-containing protein;protein_id=UTX06107.1;transl_table=11 CP101611.1 Genbank gene 1093129 1093365 . + . ID=gene-NM058_05565;Name=NM058_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05565 CP101611.1 Protein Homology CDS 1093129 1093365 . + 0 ID=cds-UTX06108.1;Parent=gene-NM058_05565;Dbxref=NCBI_GP:UTX06108.1;Name=UTX06108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391060.1;locus_tag=NM058_05565;product=YuzF family protein;protein_id=UTX06108.1;transl_table=11 CP101611.1 Genbank pseudogene 1093406 1093775 . - . ID=gene-NM058_05570;Name=NM058_05570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05570;pseudo=true CP101611.1 Protein Homology CDS 1093406 1093775 . - 0 ID=cds-NM058_05570;Parent=gene-NM058_05570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391059.1;locus_tag=NM058_05570;product=DUF2283 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1093890 1094996 . + . ID=gene-NM058_05575;Name=NM058_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05575 CP101611.1 Protein Homology CDS 1093890 1094996 . + 0 ID=cds-UTX06109.1;Parent=gene-NM058_05575;Dbxref=NCBI_GP:UTX06109.1;Name=UTX06109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014305723.1;locus_tag=NM058_05575;product=AI-2E family transporter;protein_id=UTX06109.1;transl_table=11 CP101611.1 Genbank gene 1095060 1095281 . + . ID=gene-NM058_05580;Name=NM058_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05580 CP101611.1 Protein Homology CDS 1095060 1095281 . + 0 ID=cds-UTX06110.1;Parent=gene-NM058_05580;Dbxref=NCBI_GP:UTX06110.1;Name=UTX06110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391057.1;locus_tag=NM058_05580;product=spore germination protein;protein_id=UTX06110.1;transl_table=11 CP101611.1 Genbank gene 1095354 1095602 . + . ID=gene-NM058_05585;Name=NM058_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05585 CP101611.1 Protein Homology CDS 1095354 1095602 . + 0 ID=cds-UTX06111.1;Parent=gene-NM058_05585;Dbxref=NCBI_GP:UTX06111.1;Name=UTX06111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391056.1;locus_tag=NM058_05585;product=YueH family protein;protein_id=UTX06111.1;transl_table=11 CP101611.1 Genbank pseudogene 1095674 1096073 . + . ID=gene-NM058_05590;Name=NM058_05590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05590;pseudo=true CP101611.1 Protein Homology CDS 1095674 1096073 . + 0 ID=cds-NM058_05590;Parent=gene-NM058_05590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014114990.1;locus_tag=NM058_05590;product=YueI family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1096170 1096721 . + . ID=gene-NM058_05595;Name=NM058_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05595 CP101611.1 Protein Homology CDS 1096170 1096721 . + 0 ID=cds-UTX06112.1;Parent=gene-NM058_05595;Dbxref=NCBI_GP:UTX06112.1;Name=UTX06112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391054.1;locus_tag=NM058_05595;product=cysteine hydrolase;protein_id=UTX06112.1;transl_table=11 CP101611.1 Genbank gene 1096737 1098209 . + . ID=gene-NM058_05600;Name=NM058_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05600 CP101611.1 Protein Homology CDS 1096737 1098209 . + 0 ID=cds-UTX06113.1;Parent=gene-NM058_05600;Dbxref=NCBI_GP:UTX06113.1;Name=UTX06113.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391053.1;locus_tag=NM058_05600;product=nicotinate phosphoribosyltransferase;protein_id=UTX06113.1;transl_table=11 CP101611.1 Genbank gene 1098347 1099576 . + . ID=gene-NM058_05605;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=NM058_05605 CP101611.1 Protein Homology CDS 1098347 1099576 . + 0 ID=cds-UTX06114.1;Parent=gene-NM058_05605;Dbxref=NCBI_GP:UTX06114.1;Name=UTX06114.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391052.1;locus_tag=NM058_05605;product=cyclic di-GMP phosphodiesterase;protein_id=UTX06114.1;transl_table=11 CP101611.1 Genbank gene 1099552 1099920 . - . ID=gene-NM058_05610;Name=NM058_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05610 CP101611.1 Protein Homology CDS 1099552 1099920 . - 0 ID=cds-UTX06115.1;Parent=gene-NM058_05610;Dbxref=NCBI_GP:UTX06115.1;Name=UTX06115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391051.2;locus_tag=NM058_05610;product=hypothetical protein;protein_id=UTX06115.1;transl_table=11 CP101611.1 Genbank gene 1100033 1100200 . - . ID=gene-NM058_05615;Name=NM058_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05615 CP101611.1 Protein Homology CDS 1100033 1100200 . - 0 ID=cds-UTX06116.1;Parent=gene-NM058_05615;Dbxref=NCBI_GP:UTX06116.1;Name=UTX06116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014480706.1;locus_tag=NM058_05615;product=hypothetical protein;protein_id=UTX06116.1;transl_table=11 CP101611.1 Genbank gene 1100380 1100520 . + . ID=gene-NM058_05620;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=NM058_05620 CP101611.1 Protein Homology CDS 1100380 1100520 . + 0 ID=cds-UTX06117.1;Parent=gene-NM058_05620;Dbxref=NCBI_GP:UTX06117.1;Name=UTX06117.1;gbkey=CDS;gene=degQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391050.1;locus_tag=NM058_05620;product=degradation enzyme regulation protein DegQ;protein_id=UTX06117.1;transl_table=11 CP101611.1 Genbank gene 1100703 1101563 . + . ID=gene-NM058_05625;Name=NM058_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05625 CP101611.1 Protein Homology CDS 1100703 1101563 . + 0 ID=cds-UTX06118.1;Parent=gene-NM058_05625;Dbxref=NCBI_GP:UTX06118.1;Name=UTX06118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259333.1;locus_tag=NM058_05625;product=polyprenyl synthetase family protein;protein_id=UTX06118.1;transl_table=11 CP101611.1 Genbank gene 1101578 1101739 . + . ID=gene-NM058_05630;Name=comX;gbkey=Gene;gene=comX;gene_biotype=protein_coding;locus_tag=NM058_05630 CP101611.1 Protein Homology CDS 1101578 1101739 . + 0 ID=cds-UTX06119.1;Parent=gene-NM058_05630;Dbxref=NCBI_GP:UTX06119.1;Name=UTX06119.1;gbkey=CDS;gene=comX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003241045.1;locus_tag=NM058_05630;product=competence pheromone ComX;protein_id=UTX06119.1;transl_table=11 CP101611.1 Genbank gene 1101747 1104044 . + . ID=gene-NM058_05635;Name=NM058_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05635 CP101611.1 Protein Homology CDS 1101747 1104044 . + 0 ID=cds-UTX06120.1;Parent=gene-NM058_05635;Dbxref=NCBI_GP:UTX06120.1;Name=UTX06120.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003242894.1;locus_tag=NM058_05635;product=histidine kinase;protein_id=UTX06120.1;transl_table=11 CP101611.1 Genbank gene 1104125 1104769 . + . ID=gene-NM058_05640;Name=comA;gbkey=Gene;gene=comA;gene_biotype=protein_coding;locus_tag=NM058_05640 CP101611.1 Protein Homology CDS 1104125 1104769 . + 0 ID=cds-UTX06121.1;Parent=gene-NM058_05640;Dbxref=NCBI_GP:UTX06121.1;Name=UTX06121.1;gbkey=CDS;gene=comA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391046.1;locus_tag=NM058_05640;product=two-component system response regulator ComA;protein_id=UTX06121.1;transl_table=11 CP101611.1 Genbank gene 1104788 1105168 . + . ID=gene-NM058_05645;Name=NM058_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05645 CP101611.1 Protein Homology CDS 1104788 1105168 . + 0 ID=cds-UTX06976.1;Parent=gene-NM058_05645;Dbxref=NCBI_GP:UTX06976.1;Name=UTX06976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391045.2;locus_tag=NM058_05645;product=hotdog fold thioesterase;protein_id=UTX06976.1;transl_table=11 CP101611.1 Genbank gene 1105207 1105581 . - . ID=gene-NM058_05650;Name=mnhG;gbkey=Gene;gene=mnhG;gene_biotype=protein_coding;locus_tag=NM058_05650 CP101611.1 Protein Homology CDS 1105207 1105581 . - 0 ID=cds-UTX06122.1;Parent=gene-NM058_05650;Dbxref=NCBI_GP:UTX06122.1;Name=UTX06122.1;Ontology_term=GO:0098662,GO:1902600,GO:0005451;gbkey=CDS;gene=mnhG;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=inorganic cation transmembrane transport|0098662||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391044.1;locus_tag=NM058_05650;product=monovalent cation/H(+) antiporter subunit G;protein_id=UTX06122.1;transl_table=11 CP101611.1 Genbank gene 1105565 1105849 . - . ID=gene-NM058_05655;Name=NM058_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05655 CP101611.1 Protein Homology CDS 1105565 1105849 . - 0 ID=cds-UTX06123.1;Parent=gene-NM058_05655;Dbxref=NCBI_GP:UTX06123.1;Name=UTX06123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391043.2;locus_tag=NM058_05655;product=Na(+)/H(+) antiporter subunit F1;protein_id=UTX06123.1;transl_table=11 CP101611.1 Genbank pseudogene 1105849 1106323 . - . ID=gene-NM058_05660;Name=NM058_05660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05660;pseudo=true CP101611.1 Protein Homology CDS 1105849 1106323 . - 0 ID=cds-NM058_05660;Parent=gene-NM058_05660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054591.2;locus_tag=NM058_05660;product=Na+/H+ antiporter subunit E;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1106329 1107810 . - . ID=gene-NM058_05665;Name=NM058_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05665 CP101611.1 Protein Homology CDS 1106329 1107810 . - 0 ID=cds-UTX06124.1;Parent=gene-NM058_05665;Dbxref=NCBI_GP:UTX06124.1;Name=UTX06124.1;Ontology_term=GO:0042773,GO:0008137,GO:0015297;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,antiporter activity|0015297||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391041.3;locus_tag=NM058_05665;product=Na+/H+ antiporter subunit D;protein_id=UTX06124.1;transl_table=11 CP101611.1 Genbank gene 1107803 1108144 . - . ID=gene-NM058_05670;Name=NM058_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05670 CP101611.1 Protein Homology CDS 1107803 1108144 . - 0 ID=cds-UTX06125.1;Parent=gene-NM058_05670;Dbxref=NCBI_GP:UTX06125.1;Name=UTX06125.1;Ontology_term=GO:0006812,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391040.2;locus_tag=NM058_05670;product=Na(+)/H(+) antiporter subunit C;protein_id=UTX06125.1;transl_table=11 CP101611.1 Genbank gene 1108144 1108575 . - . ID=gene-NM058_05675;Name=NM058_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05675 CP101611.1 Protein Homology CDS 1108144 1108575 . - 0 ID=cds-UTX06126.1;Parent=gene-NM058_05675;Dbxref=NCBI_GP:UTX06126.1;Name=UTX06126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391039.1;locus_tag=NM058_05675;product=Na(+)/H(+) antiporter subunit B;protein_id=UTX06126.1;transl_table=11 CP101611.1 Genbank gene 1108568 1110973 . - . ID=gene-NM058_05680;Name=NM058_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05680 CP101611.1 Protein Homology CDS 1108568 1110973 . - 0 ID=cds-UTX06127.1;Parent=gene-NM058_05680;Dbxref=NCBI_GP:UTX06127.1;Name=UTX06127.1;Ontology_term=GO:0098662,GO:0005451;gbkey=CDS;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=inorganic cation transmembrane transport|0098662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391038.2;locus_tag=NM058_05680;product=Na+/H+ antiporter subunit A;protein_id=UTX06127.1;transl_table=11 CP101611.1 Genbank gene 1111205 1111417 . + . ID=gene-NM058_05685;Name=NM058_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05685 CP101611.1 Protein Homology CDS 1111205 1111417 . + 0 ID=cds-UTX06128.1;Parent=gene-NM058_05685;Dbxref=NCBI_GP:UTX06128.1;Name=UTX06128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391037.1;locus_tag=NM058_05685;product=hypothetical protein;protein_id=UTX06128.1;transl_table=11 CP101611.1 Genbank gene 1111455 1112801 . - . ID=gene-NM058_05690;Name=maeN;gbkey=Gene;gene=maeN;gene_biotype=protein_coding;locus_tag=NM058_05690 CP101611.1 Protein Homology CDS 1111455 1112801 . - 0 ID=cds-UTX06129.1;Parent=gene-NM058_05690;Dbxref=NCBI_GP:UTX06129.1;Name=UTX06129.1;gbkey=CDS;gene=maeN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391036.1;locus_tag=NM058_05690;product=sodium/malate symporter MaeN;protein_id=UTX06129.1;transl_table=11 CP101611.1 Genbank gene 1112956 1113915 . - . ID=gene-NM058_05695;Name=nupQ;gbkey=Gene;gene=nupQ;gene_biotype=protein_coding;locus_tag=NM058_05695 CP101611.1 Protein Homology CDS 1112956 1113915 . - 0 ID=cds-UTX06130.1;Parent=gene-NM058_05695;Dbxref=NCBI_GP:UTX06130.1;Name=UTX06130.1;gbkey=CDS;gene=nupQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391035.1;locus_tag=NM058_05695;product=guanosine ABC transporter permease NupQ;protein_id=UTX06130.1;transl_table=11 CP101611.1 Genbank pseudogene 1113916 1114960 . - . ID=gene-NM058_05700;Name=nupP;gbkey=Gene;gene=nupP;gene_biotype=pseudogene;locus_tag=NM058_05700;pseudo=true CP101611.1 Protein Homology CDS 1113916 1114960 . - 0 ID=cds-NM058_05700;Parent=gene-NM058_05700;Note=frameshifted;gbkey=CDS;gene=nupP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391034.1;locus_tag=NM058_05700;product=guanosine ABC transporter permease NupP;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1114953 1116484 . - . ID=gene-NM058_05705;Name=nupO;gbkey=Gene;gene=nupO;gene_biotype=pseudogene;locus_tag=NM058_05705;pseudo=true CP101611.1 Protein Homology CDS 1114953 1116484 . - 0 ID=cds-NM058_05705;Parent=gene-NM058_05705;Note=frameshifted;gbkey=CDS;gene=nupO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391033.1;locus_tag=NM058_05705;product=guanosine ABC transporter ATP-binding protein NupO;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1116559 1117638 . - . ID=gene-NM058_05710;Name=nupN;gbkey=Gene;gene=nupN;gene_biotype=protein_coding;locus_tag=NM058_05710 CP101611.1 Protein Homology CDS 1116559 1117638 . - 0 ID=cds-UTX06131.1;Parent=gene-NM058_05710;Dbxref=NCBI_GP:UTX06131.1;Name=UTX06131.1;gbkey=CDS;gene=nupN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391032.2;locus_tag=NM058_05710;product=guanosine ABC transporter substrate-binding protein NupN;protein_id=UTX06131.1;transl_table=11 CP101611.1 Genbank gene 1118112 1118819 . - . ID=gene-NM058_05715;Name=maeM;gbkey=Gene;gene=maeM;gene_biotype=protein_coding;gene_synonym=malR,yufM;locus_tag=NM058_05715 CP101611.1 Protein Homology CDS 1118112 1118819 . - 0 ID=cds-UTX06132.1;Parent=gene-NM058_05715;Dbxref=NCBI_GP:UTX06132.1;Name=UTX06132.1;gbkey=CDS;gene=maeM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391031.1;locus_tag=NM058_05715;product=two-component system response regulator MaeM;protein_id=UTX06132.1;transl_table=11 CP101611.1 Genbank gene 1118812 1120413 . - . ID=gene-NM058_05720;Name=maeL;gbkey=Gene;gene=maeL;gene_biotype=protein_coding;gene_synonym=malK,yufL;locus_tag=NM058_05720 CP101611.1 Protein Homology CDS 1118812 1120413 . - 0 ID=cds-UTX06133.1;Parent=gene-NM058_05720;Dbxref=NCBI_GP:UTX06133.1;Name=UTX06133.1;gbkey=CDS;gene=maeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391030.1;locus_tag=NM058_05720;product=two-component system sensor histidine kinase MaeL;protein_id=UTX06133.1;transl_table=11 CP101611.1 Genbank gene 1120591 1121148 . + . ID=gene-NM058_05725;Name=NM058_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05725 CP101611.1 Protein Homology CDS 1120591 1121148 . + 0 ID=cds-UTX06134.1;Parent=gene-NM058_05725;Dbxref=NCBI_GP:UTX06134.1;Name=UTX06134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391029.2;locus_tag=NM058_05725;product=YufK family protein;protein_id=UTX06134.1;transl_table=11 CP101611.1 Genbank gene 1121166 1121579 . - . ID=gene-NM058_05730;Name=NM058_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05730 CP101611.1 Protein Homology CDS 1121166 1121579 . - 0 ID=cds-UTX06135.1;Parent=gene-NM058_05730;Dbxref=NCBI_GP:UTX06135.1;Name=UTX06135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391028.1;locus_tag=NM058_05730;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=UTX06135.1;transl_table=11 CP101611.1 Genbank pseudogene 1121600 1123475 . - . ID=gene-NM058_05735;Name=NM058_05735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05735;pseudo=true CP101611.1 Protein Homology CDS 1121600 1123475 . - 0 ID=cds-NM058_05735;Parent=gene-NM058_05735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391027.2;locus_tag=NM058_05735;product=penicillin-binding protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1123568 1124746 . - . ID=gene-NM058_05740;Name=NM058_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05740 CP101611.1 Protein Homology CDS 1123568 1124746 . - 0 ID=cds-UTX06136.1;Parent=gene-NM058_05740;Dbxref=NCBI_GP:UTX06136.1;Name=UTX06136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013172987.1;locus_tag=NM058_05740;product=multidrug efflux MFS transporter;protein_id=UTX06136.1;transl_table=11 CP101611.1 Genbank gene 1124679 1124882 . + . ID=gene-NM058_05745;Name=NM058_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05745 CP101611.1 Protein Homology CDS 1124679 1124882 . + 0 ID=cds-UTX06137.1;Parent=gene-NM058_05745;Dbxref=NCBI_GP:UTX06137.1;Name=UTX06137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003220752.1;locus_tag=NM058_05745;product=hypothetical protein;protein_id=UTX06137.1;transl_table=11 CP101611.1 Genbank gene 1124958 1125575 . + . ID=gene-NM058_05750;Name=kapD;gbkey=Gene;gene=kapD;gene_biotype=protein_coding;locus_tag=NM058_05750 CP101611.1 Protein Homology CDS 1124958 1125575 . + 0 ID=cds-UTX06138.1;Parent=gene-NM058_05750;Dbxref=NCBI_GP:UTX06138.1;Name=UTX06138.1;gbkey=CDS;gene=kapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391025.1;locus_tag=NM058_05750;product=3'-5' exonuclease KapD;protein_id=UTX06138.1;transl_table=11 CP101611.1 Genbank gene 1125603 1125989 . - . ID=gene-NM058_05755;Name=kapB;gbkey=Gene;gene=kapB;gene_biotype=protein_coding;locus_tag=NM058_05755 CP101611.1 Protein Homology CDS 1125603 1125989 . - 0 ID=cds-UTX06139.1;Parent=gene-NM058_05755;Dbxref=NCBI_GP:UTX06139.1;Name=UTX06139.1;gbkey=CDS;gene=kapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391024.1;locus_tag=NM058_05755;product=kinase-associated lipoprotein KapB;protein_id=UTX06139.1;transl_table=11 CP101611.1 Genbank gene 1126035 1127321 . - . ID=gene-NM058_05760;Name=kinB;gbkey=Gene;gene=kinB;gene_biotype=protein_coding;locus_tag=NM058_05760 CP101611.1 Protein Homology CDS 1126035 1127321 . - 0 ID=cds-UTX06140.1;Parent=gene-NM058_05760;Dbxref=NCBI_GP:UTX06140.1;Name=UTX06140.1;gbkey=CDS;gene=kinB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391023.2;locus_tag=NM058_05760;product=sporulation sensor histidine kinase KinB;protein_id=UTX06140.1;transl_table=11 CP101611.1 Genbank gene 1127449 1128612 . - . ID=gene-NM058_05765;Name=patB;gbkey=Gene;gene=patB;gene_biotype=protein_coding;locus_tag=NM058_05765 CP101611.1 Protein Homology CDS 1127449 1128612 . - 0 ID=cds-UTX06141.1;Parent=gene-NM058_05765;Dbxref=NCBI_GP:UTX06141.1;Name=UTX06141.1;gbkey=CDS;gene=patB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391022.1;locus_tag=NM058_05765;product=cystathionine beta-lyase PatB;protein_id=UTX06141.1;transl_table=11 CP101611.1 Genbank gene 1128696 1128956 . + . ID=gene-NM058_05770;Name=NM058_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05770 CP101611.1 Protein Homology CDS 1128696 1128956 . + 0 ID=cds-UTX06142.1;Parent=gene-NM058_05770;Dbxref=NCBI_GP:UTX06142.1;Name=UTX06142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391021.2;locus_tag=NM058_05770;product=YugE family protein;protein_id=UTX06142.1;transl_table=11 CP101611.1 Genbank gene 1128984 1129805 . - . ID=gene-NM058_05775;Name=NM058_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05775 CP101611.1 Protein Homology CDS 1128984 1129805 . - 0 ID=cds-UTX06143.1;Parent=gene-NM058_05775;Dbxref=NCBI_GP:UTX06143.1;Name=UTX06143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391020.1;locus_tag=NM058_05775;product=alpha/beta hydrolase;protein_id=UTX06143.1;transl_table=11 CP101611.1 Genbank gene 1129956 1130456 . + . ID=gene-NM058_05780;Name=NM058_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05780 CP101611.1 Protein Homology CDS 1129956 1130456 . + 0 ID=cds-UTX06144.1;Parent=gene-NM058_05780;Dbxref=NCBI_GP:UTX06144.1;Name=UTX06144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391019.1;locus_tag=NM058_05780;product=Lrp/AsnC family transcriptional regulator;protein_id=UTX06144.1;transl_table=11 CP101611.1 Genbank gene 1130457 1131617 . + . ID=gene-NM058_05785;Name=NM058_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05785 CP101611.1 Protein Homology CDS 1130457 1131617 . + 0 ID=cds-UTX06145.1;Parent=gene-NM058_05785;Dbxref=NCBI_GP:UTX06145.1;Name=UTX06145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391018.2;locus_tag=NM058_05785;product=aminotransferase;protein_id=UTX06145.1;transl_table=11 CP101611.1 Genbank pseudogene 1131819 1132210 . + . ID=gene-NM058_05790;Name=yugI;gbkey=Gene;gene=yugI;gene_biotype=pseudogene;locus_tag=NM058_05790;pseudo=true CP101611.1 Protein Homology CDS 1131819 1132210 . + 0 ID=cds-NM058_05790;Parent=gene-NM058_05790;Note=frameshifted;gbkey=CDS;gene=yugI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391017.1;locus_tag=NM058_05790;product=S1 domain-containing post-transcriptional regulator GSP13;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1132255 1132491 . - . ID=gene-NM058_05795;Name=NM058_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05795 CP101611.1 Protein Homology CDS 1132255 1132491 . - 0 ID=cds-UTX06146.1;Parent=gene-NM058_05795;Dbxref=NCBI_GP:UTX06146.1;Name=UTX06146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391016.1;locus_tag=NM058_05795;product=DUF378 domain-containing protein;protein_id=UTX06146.1;transl_table=11 CP101611.1 Genbank pseudogene 1132722 1133884 . + . ID=gene-NM058_05800;Name=NM058_05800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05800;pseudo=true CP101611.1 Protein Homology CDS 1132722 1133884 . + 0 ID=cds-NM058_05800;Parent=gene-NM058_05800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012678.2;locus_tag=NM058_05800;product=iron-containing alcohol dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1133987 1135159 . + . ID=gene-NM058_05805;Name=NM058_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05805 CP101611.1 Protein Homology CDS 1133987 1135159 . + 0 ID=cds-UTX06147.1;Parent=gene-NM058_05805;Dbxref=NCBI_GP:UTX06147.1;Name=UTX06147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391014.1;locus_tag=NM058_05805;product=iron-containing alcohol dehydrogenase;protein_id=UTX06147.1;transl_table=11 CP101611.1 Genbank gene 1135270 1136622 . + . ID=gene-NM058_05810;Name=NM058_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05810 CP101611.1 Protein Homology CDS 1135270 1136622 . + 0 ID=cds-UTX06148.1;Parent=gene-NM058_05810;Dbxref=NCBI_GP:UTX06148.1;Name=UTX06148.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391013.2;locus_tag=NM058_05810;product=glucose-6-phosphate isomerase;protein_id=UTX06148.1;transl_table=11 CP101611.1 Genbank pseudogene 1136680 1137050 . + . ID=gene-NM058_05815;Name=NM058_05815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05815;pseudo=true CP101611.1 Protein Homology CDS 1136680 1137050 . + 0 ID=cds-NM058_05815;Parent=gene-NM058_05815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391012.1;locus_tag=NM058_05815;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1137110 1137514 . + . ID=gene-NM058_05820;Name=NM058_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05820 CP101611.1 Protein Homology CDS 1137110 1137514 . + 0 ID=cds-UTX06149.1;Parent=gene-NM058_05820;Dbxref=NCBI_GP:UTX06149.1;Name=UTX06149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391011.1;locus_tag=NM058_05820;product=YugN-like family protein;protein_id=UTX06149.1;transl_table=11 CP101611.1 Genbank pseudogene 1137511 1138495 . - . ID=gene-NM058_05825;Name=NM058_05825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05825;pseudo=true CP101611.1 Protein Homology CDS 1137511 1138495 . - 0 ID=cds-NM058_05825;Parent=gene-NM058_05825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391010.3;locus_tag=NM058_05825;product=potassium channel family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1138492 1138824 . - . ID=gene-NM058_05830;Name=mstX;gbkey=Gene;gene=mstX;gene_biotype=protein_coding;locus_tag=NM058_05830 CP101611.1 Protein Homology CDS 1138492 1138824 . - 0 ID=cds-UTX06150.1;Parent=gene-NM058_05830;Dbxref=NCBI_GP:UTX06150.1;Name=UTX06150.1;gbkey=CDS;gene=mstX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003228886.1;locus_tag=NM058_05830;product=biofilm formation protein MstX;protein_id=UTX06150.1;transl_table=11 CP101611.1 Genbank gene 1138871 1139134 . + . ID=gene-NM058_05835;Name=NM058_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05835 CP101611.1 Protein Homology CDS 1138871 1139134 . + 0 ID=cds-UTX06151.1;Parent=gene-NM058_05835;Dbxref=NCBI_GP:UTX06151.1;Name=UTX06151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097777.1;locus_tag=NM058_05835;product=hypothetical protein;protein_id=UTX06151.1;transl_table=11 CP101611.1 Genbank gene 1139175 1139852 . + . ID=gene-NM058_05840;Name=NM058_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05840 CP101611.1 Protein Homology CDS 1139175 1139852 . + 0 ID=cds-UTX06152.1;Parent=gene-NM058_05840;Dbxref=NCBI_GP:UTX06152.1;Name=UTX06152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391009.1;locus_tag=NM058_05840;product=zinc metallopeptidase;protein_id=UTX06152.1;transl_table=11 CP101611.1 Genbank gene 1139896 1141188 . + . ID=gene-NM058_05845;Name=NM058_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05845 CP101611.1 Protein Homology CDS 1139896 1141188 . + 0 ID=cds-UTX06153.1;Parent=gene-NM058_05845;Dbxref=NCBI_GP:UTX06153.1;Name=UTX06153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013308040.1;locus_tag=NM058_05845;product=hemolysin family protein;protein_id=UTX06153.1;transl_table=11 CP101611.1 Genbank gene 1141313 1142977 . + . ID=gene-NM058_05850;Name=NM058_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05850 CP101611.1 Protein Homology CDS 1141313 1142977 . + 0 ID=cds-UTX06154.1;Parent=gene-NM058_05850;Dbxref=NCBI_GP:UTX06154.1;Name=UTX06154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000415199.1;locus_tag=NM058_05850;product=alpha-glucosidase;protein_id=UTX06154.1;transl_table=11 CP101611.1 Genbank gene 1143095 1143493 . + . ID=gene-NM058_05855;Name=NM058_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05855 CP101611.1 Protein Homology CDS 1143095 1143493 . + 0 ID=cds-UTX06155.1;Parent=gene-NM058_05855;Dbxref=NCBI_GP:UTX06155.1;Name=UTX06155.1;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391006.2;locus_tag=NM058_05855;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=UTX06155.1;transl_table=11 CP101611.1 Genbank pseudogene 1143561 1144537 . + . ID=gene-NM058_05860;Name=NM058_05860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05860;pseudo=true CP101611.1 Protein Homology CDS 1143561 1144537 . + 0 ID=cds-NM058_05860;Parent=gene-NM058_05860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015047.2;locus_tag=NM058_05860;product=nitronate monooxygenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1144562 1144816 . + . ID=gene-NM058_05865;Name=NM058_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05865 CP101611.1 Protein Homology CDS 1144562 1144816 . + 0 ID=cds-UTX06977.1;Parent=gene-NM058_05865;Dbxref=NCBI_GP:UTX06977.1;Name=UTX06977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097776.1;locus_tag=NM058_05865;product=hypothetical protein;protein_id=UTX06977.1;transl_table=11 CP101611.1 Genbank pseudogene 1144829 1145565 . - . ID=gene-NM058_05870;Name=NM058_05870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05870;pseudo=true CP101611.1 Protein Homology CDS 1144829 1145565 . - 0 ID=cds-NM058_05870;Parent=gene-NM058_05870;Note=frameshifted;Ontology_term=GO:0003810;gbkey=CDS;go_function=protein-glutamine gamma-glutamyltransferase activity|0003810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391005.1;locus_tag=NM058_05870;product=protein-glutamine gamma-glutamyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1145726 1147714 . + . ID=gene-NM058_05875;Name=mcpB;gbkey=Gene;gene=mcpB;gene_biotype=protein_coding;locus_tag=NM058_05875 CP101611.1 Protein Homology CDS 1145726 1147714 . + 0 ID=cds-UTX06156.1;Parent=gene-NM058_05875;Dbxref=NCBI_GP:UTX06156.1;Name=UTX06156.1;gbkey=CDS;gene=mcpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391004.2;locus_tag=NM058_05875;product=methyl-accepting chemotaxis protein McpB;protein_id=UTX06156.1;transl_table=11 CP101611.1 Genbank pseudogene 1147885 1148217 . + . ID=gene-NM058_05880;Name=NM058_05880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05880;pseudo=true CP101611.1 Protein Homology CDS 1147885 1148217 . + 0 ID=cds-NM058_05880;Parent=gene-NM058_05880;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391003.1;locus_tag=NM058_05880;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1148343 1150328 . + . ID=gene-NM058_05885;Name=mcpA;gbkey=Gene;gene=mcpA;gene_biotype=protein_coding;locus_tag=NM058_05885 CP101611.1 Protein Homology CDS 1148343 1150328 . + 0 ID=cds-UTX06978.1;Parent=gene-NM058_05885;Dbxref=NCBI_GP:UTX06978.1;Name=UTX06978.1;gbkey=CDS;gene=mcpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003244077.1;locus_tag=NM058_05885;product=methyl-accepting chemotaxis protein;protein_id=UTX06978.1;transl_table=11 CP101611.1 Genbank gene 1150441 1152429 . + . ID=gene-NM058_05890;Name=tlpB;gbkey=Gene;gene=tlpB;gene_biotype=protein_coding;locus_tag=NM058_05890 CP101611.1 Protein Homology CDS 1150441 1152429 . + 0 ID=cds-UTX06157.1;Parent=gene-NM058_05890;Dbxref=NCBI_GP:UTX06157.1;Name=UTX06157.1;gbkey=CDS;gene=tlpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391001.1;locus_tag=NM058_05890;product=methyl-accepting chemotaxis protein TlpB;protein_id=UTX06157.1;transl_table=11 CP101611.1 Genbank pseudogene 1152566 1154636 . + . ID=gene-NM058_05895;Name=NM058_05895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05895;pseudo=true CP101611.1 Protein Homology CDS 1152566 1154636 . + 0 ID=cds-NM058_05895;Parent=gene-NM058_05895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391000.1;locus_tag=NM058_05895;product=bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1154694 1155470 . + . ID=gene-NM058_05900;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=NM058_05900 CP101611.1 Protein Homology CDS 1154694 1155470 . + 0 ID=cds-UTX06158.1;Parent=gene-NM058_05900;Dbxref=NCBI_GP:UTX06158.1;Name=UTX06158.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390999.1;locus_tag=NM058_05900;product=rhamnose catabolism operon transcriptional regulator RhaR;protein_id=UTX06158.1;transl_table=11 CP101611.1 Genbank gene 1155475 1156935 . + . ID=gene-NM058_05905;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=NM058_05905 CP101611.1 Protein Homology CDS 1155475 1156935 . + 0 ID=cds-UTX06159.1;Parent=gene-NM058_05905;Dbxref=NCBI_GP:UTX06159.1;Name=UTX06159.1;Ontology_term=GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010329859.1;locus_tag=NM058_05905;product=rhamnulokinase;protein_id=UTX06159.1;transl_table=11 CP101611.1 Genbank gene 1156950 1157264 . + . ID=gene-NM058_05910;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=NM058_05910 CP101611.1 Protein Homology CDS 1156950 1157264 . + 0 ID=cds-UTX06160.1;Parent=gene-NM058_05910;Dbxref=NCBI_GP:UTX06160.1;Name=UTX06160.1;Ontology_term=GO:0019301,GO:0016857;gbkey=CDS;gene=rhaM;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390997.1;locus_tag=NM058_05910;product=L-rhamnose mutarotase;protein_id=UTX06160.1;transl_table=11 CP101611.1 Genbank gene 1157290 1158564 . + . ID=gene-NM058_05915;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=NM058_05915 CP101611.1 Protein Homology CDS 1157290 1158564 . + 0 ID=cds-UTX06161.1;Parent=gene-NM058_05915;Dbxref=NCBI_GP:UTX06161.1;Name=UTX06161.1;Ontology_term=GO:0019301,GO:0008740;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390996.1;locus_tag=NM058_05915;product=L-rhamnose isomerase;protein_id=UTX06161.1;transl_table=11 CP101611.1 Genbank gene 1158604 1159590 . - . ID=gene-NM058_05920;Name=iolU;gbkey=Gene;gene=iolU;gene_biotype=protein_coding;locus_tag=NM058_05920 CP101611.1 Protein Homology CDS 1158604 1159590 . - 0 ID=cds-UTX06162.1;Parent=gene-NM058_05920;Dbxref=NCBI_GP:UTX06162.1;Name=UTX06162.1;gbkey=CDS;gene=iolU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390995.1;locus_tag=NM058_05920;product=scyllo-inositol 2-dehydrogenase;protein_id=UTX06162.1;transl_table=11 CP101611.1 Genbank pseudogene 1159771 1160936 . + . ID=gene-NM058_05925;Name=NM058_05925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05925;pseudo=true CP101611.1 Protein Homology CDS 1159771 1160936 . + 0 ID=cds-NM058_05925;Parent=gene-NM058_05925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390994.1;locus_tag=NM058_05925;product=AI-2E family transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1161029 1161859 . + . ID=gene-NM058_05930;Name=NM058_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05930 CP101611.1 Protein Homology CDS 1161029 1161859 . + 0 ID=cds-UTX06163.1;Parent=gene-NM058_05930;Dbxref=NCBI_GP:UTX06163.1;Name=UTX06163.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390993.1;locus_tag=NM058_05930;product=undecaprenyl-diphosphate phosphatase;protein_id=UTX06163.1;transl_table=11 CP101611.1 Genbank gene 1161966 1162038 . + . ID=gene-NM058_05935;Name=NM058_05935;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_05935 CP101611.1 tRNAscan-SE tRNA 1161966 1162038 . + . ID=rna-NM058_05935;Parent=gene-NM058_05935;anticodon=(pos:1161999..1162001);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_05935;product=tRNA-Ala CP101611.1 tRNAscan-SE exon 1161966 1162038 . + . ID=exon-NM058_05935-1;Parent=rna-NM058_05935;anticodon=(pos:1161999..1162001);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_05935;product=tRNA-Ala CP101611.1 Genbank pseudogene 1162145 1162629 . - . ID=gene-NM058_05940;Name=NM058_05940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_05940;pseudo=true CP101611.1 Protein Homology CDS 1162145 1162629 . - 0 ID=cds-NM058_05940;Parent=gene-NM058_05940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390992.1;locus_tag=NM058_05940;product=cysteine dioxygenase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1163158 1164690 . + . ID=gene-NM058_05945;Name=NM058_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05945 CP101611.1 Protein Homology CDS 1163158 1164690 . + 0 ID=cds-UTX06164.1;Parent=gene-NM058_05945;Dbxref=NCBI_GP:UTX06164.1;Name=UTX06164.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259293.1;locus_tag=NM058_05945;product=MFS transporter;protein_id=UTX06164.1;transl_table=11 CP101611.1 Genbank gene 1164843 1165691 . + . ID=gene-NM058_05950;Name=lytG;gbkey=Gene;gene=lytG;gene_biotype=protein_coding;locus_tag=NM058_05950 CP101611.1 Protein Homology CDS 1164843 1165691 . + 0 ID=cds-UTX06165.1;Parent=gene-NM058_05950;Dbxref=NCBI_GP:UTX06165.1;Name=UTX06165.1;gbkey=CDS;gene=lytG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390990.1;locus_tag=NM058_05950;product=exo-glucosaminidase LytG;protein_id=UTX06165.1;transl_table=11 CP101611.1 Genbank gene 1165800 1166063 . + . ID=gene-NM058_05955;Name=NM058_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05955 CP101611.1 Protein Homology CDS 1165800 1166063 . + 0 ID=cds-UTX06166.1;Parent=gene-NM058_05955;Dbxref=NCBI_GP:UTX06166.1;Name=UTX06166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390989.1;locus_tag=NM058_05955;product=YiaA/YiaB family inner membrane protein;protein_id=UTX06166.1;transl_table=11 CP101611.1 Genbank gene 1166100 1167437 . - . ID=gene-NM058_05960;Name=ktrB;gbkey=Gene;gene=ktrB;gene_biotype=protein_coding;locus_tag=NM058_05960 CP101611.1 Protein Homology CDS 1166100 1167437 . - 0 ID=cds-UTX06167.1;Parent=gene-NM058_05960;Dbxref=NCBI_GP:UTX06167.1;Name=UTX06167.1;gbkey=CDS;gene=ktrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390988.1;locus_tag=NM058_05960;product=Ktr system potassium transporter KtrB;protein_id=UTX06167.1;transl_table=11 CP101611.1 Genbank gene 1167444 1168112 . - . ID=gene-NM058_05965;Name=ktrA;gbkey=Gene;gene=ktrA;gene_biotype=protein_coding;locus_tag=NM058_05965 CP101611.1 Protein Homology CDS 1167444 1168112 . - 0 ID=cds-UTX06168.1;Parent=gene-NM058_05965;Dbxref=NCBI_GP:UTX06168.1;Name=UTX06168.1;gbkey=CDS;gene=ktrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390987.1;locus_tag=NM058_05965;product=potassium uptake protein KtrA;protein_id=UTX06168.1;transl_table=11 CP101611.1 cmsearch riboswitch 1168185 1168333 . - . ID=id-CP101611.1:1168185..1168333;Dbxref=RFAM:RF00379;Note=cyclic di-AMP (ydaO/yuaA leader) riboswitch senses the signaling molecule cyclic di-AMP;bound_moiety=cyclic di-AMP;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 1168479 1169024 . - . ID=gene-NM058_05970;Name=bslA;gbkey=Gene;gene=bslA;gene_biotype=protein_coding;gene_synonym=yuaB;locus_tag=NM058_05970 CP101611.1 Protein Homology CDS 1168479 1169024 . - 0 ID=cds-UTX06169.1;Parent=gene-NM058_05970;Dbxref=NCBI_GP:UTX06169.1;Name=UTX06169.1;gbkey=CDS;gene=bslA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390986.1;locus_tag=NM058_05970;product=biofilm-surface layer protein BslA;protein_id=UTX06169.1;transl_table=11 CP101611.1 Genbank gene 1169232 1169774 . - . ID=gene-NM058_05975;Name=gbsR;gbkey=Gene;gene=gbsR;gene_biotype=protein_coding;locus_tag=NM058_05975 CP101611.1 Protein Homology CDS 1169232 1169774 . - 0 ID=cds-UTX06170.1;Parent=gene-NM058_05975;Dbxref=NCBI_GP:UTX06170.1;Name=UTX06170.1;gbkey=CDS;gene=gbsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390985.1;locus_tag=NM058_05975;product=transcriptional regulator GbsR;protein_id=UTX06170.1;transl_table=11 CP101611.1 Genbank gene 1169973 1171445 . + . ID=gene-NM058_05980;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=NM058_05980 CP101611.1 Protein Homology CDS 1169973 1171445 . + 0 ID=cds-UTX06171.1;Parent=gene-NM058_05980;Dbxref=NCBI_GP:UTX06171.1;Name=UTX06171.1;Ontology_term=GO:0006578,GO:0008802;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase activity|0008802||IEA;go_process=amino-acid betaine biosynthetic process|0006578||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390984.1;locus_tag=NM058_05980;product=betaine-aldehyde dehydrogenase;protein_id=UTX06171.1;transl_table=11 CP101611.1 Genbank gene 1171462 1172670 . + . ID=gene-NM058_05985;Name=gbsB;gbkey=Gene;gene=gbsB;gene_biotype=protein_coding;locus_tag=NM058_05985 CP101611.1 Protein Homology CDS 1171462 1172670 . + 0 ID=cds-UTX06979.1;Parent=gene-NM058_05985;Dbxref=NCBI_GP:UTX06979.1;Name=UTX06979.1;gbkey=CDS;gene=gbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390983.2;locus_tag=NM058_05985;product=choline dehydrogenase;protein_id=UTX06979.1;transl_table=11 CP101611.1 Genbank gene 1172759 1173337 . + . ID=gene-NM058_05990;Name=NM058_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05990 CP101611.1 Protein Homology CDS 1172759 1173337 . + 0 ID=cds-UTX06172.1;Parent=gene-NM058_05990;Dbxref=NCBI_GP:UTX06172.1;Name=UTX06172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390982.1;locus_tag=NM058_05990;product=MOSC domain-containing protein;protein_id=UTX06172.1;transl_table=11 CP101611.1 Genbank gene 1173343 1173831 . - . ID=gene-NM058_05995;Name=NM058_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_05995 CP101611.1 Protein Homology CDS 1173343 1173831 . - 0 ID=cds-UTX06980.1;Parent=gene-NM058_05995;Dbxref=NCBI_GP:UTX06980.1;Name=UTX06980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259286.1;locus_tag=NM058_05995;product=DinB family protein;protein_id=UTX06980.1;transl_table=11 CP101611.1 Genbank gene 1173999 1174523 . + . ID=gene-NM058_06000;Name=NM058_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06000 CP101611.1 Protein Homology CDS 1173999 1174523 . + 0 ID=cds-UTX06981.1;Parent=gene-NM058_06000;Dbxref=NCBI_GP:UTX06981.1;Name=UTX06981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390980.1;locus_tag=NM058_06000;product=NfeD family protein;protein_id=UTX06981.1;transl_table=11 CP101611.1 Genbank pseudogene 1174542 1176069 . + . ID=gene-NM058_06005;Name=floT;gbkey=Gene;gene=floT;gene_biotype=pseudogene;locus_tag=NM058_06005;pseudo=true CP101611.1 Protein Homology CDS 1174542 1176069 . + 0 ID=cds-NM058_06005;Parent=gene-NM058_06005;Note=frameshifted;gbkey=CDS;gene=floT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390979.1;locus_tag=NM058_06005;product=flotillin lipid rafts scaffold protein FloT;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1176094 1176615 . + . ID=gene-NM058_06010;Name=NM058_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06010 CP101611.1 Protein Homology CDS 1176094 1176615 . + 0 ID=cds-UTX06173.1;Parent=gene-NM058_06010;Dbxref=NCBI_GP:UTX06173.1;Name=UTX06173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390978.1;locus_tag=NM058_06010;product=GNAT family N-acetyltransferase;protein_id=UTX06173.1;transl_table=11 CP101611.1 Genbank gene 1176656 1177234 . - . ID=gene-NM058_06015;Name=thiT;gbkey=Gene;gene=thiT;gene_biotype=protein_coding;locus_tag=NM058_06015 CP101611.1 Protein Homology CDS 1176656 1177234 . - 0 ID=cds-UTX06174.1;Parent=gene-NM058_06015;Dbxref=NCBI_GP:UTX06174.1;Name=UTX06174.1;Ontology_term=GO:0015888,GO:0015234;gbkey=CDS;gene=thiT;go_function=thiamine transmembrane transporter activity|0015234||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390977.1;locus_tag=NM058_06015;product=energy-coupled thiamine transporter ThiT;protein_id=UTX06174.1;transl_table=11 CP101611.1 cmsearch riboswitch 1177333 1177434 . - . ID=id-CP101611.1:1177333..1177434;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 1177904 1179453 . + . ID=gene-NM058_06020;Name=NM058_06020;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_06020 CP101611.1 cmsearch rRNA 1177904 1179453 . + . ID=rna-NM058_06020;Parent=gene-NM058_06020;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_06020;product=16S ribosomal RNA CP101611.1 cmsearch exon 1177904 1179453 . + . ID=exon-NM058_06020-1;Parent=rna-NM058_06020;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_06020;product=16S ribosomal RNA CP101611.1 Genbank gene 1179623 1182550 . + . ID=gene-NM058_06025;Name=NM058_06025;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_06025 CP101611.1 cmsearch rRNA 1179623 1182550 . + . ID=rna-NM058_06025;Parent=gene-NM058_06025;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_06025;product=23S ribosomal RNA CP101611.1 cmsearch exon 1179623 1182550 . + . ID=exon-NM058_06025-1;Parent=rna-NM058_06025;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_06025;product=23S ribosomal RNA CP101611.1 Genbank gene 1182605 1182720 . + . ID=gene-NM058_06030;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NM058_06030 CP101611.1 cmsearch rRNA 1182605 1182720 . + . ID=rna-NM058_06030;Parent=gene-NM058_06030;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_06030;product=5S ribosomal RNA CP101611.1 cmsearch exon 1182605 1182720 . + . ID=exon-NM058_06030-1;Parent=rna-NM058_06030;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_06030;product=5S ribosomal RNA CP101611.1 Genbank gene 1182743 1182818 . + . ID=gene-NM058_06035;Name=NM058_06035;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06035 CP101611.1 tRNAscan-SE tRNA 1182743 1182818 . + . ID=rna-NM058_06035;Parent=gene-NM058_06035;anticodon=(pos:1182776..1182778);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06035;product=tRNA-Val CP101611.1 tRNAscan-SE exon 1182743 1182818 . + . ID=exon-NM058_06035-1;Parent=rna-NM058_06035;anticodon=(pos:1182776..1182778);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06035;product=tRNA-Val CP101611.1 Genbank gene 1182854 1182929 . + . ID=gene-NM058_06040;Name=NM058_06040;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06040 CP101611.1 tRNAscan-SE tRNA 1182854 1182929 . + . ID=rna-NM058_06040;Parent=gene-NM058_06040;anticodon=(pos:1182887..1182889);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06040;product=tRNA-Thr CP101611.1 tRNAscan-SE exon 1182854 1182929 . + . ID=exon-NM058_06040-1;Parent=rna-NM058_06040;anticodon=(pos:1182887..1182889);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06040;product=tRNA-Thr CP101611.1 Genbank gene 1182967 1183042 . + . ID=gene-NM058_06045;Name=NM058_06045;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06045 CP101611.1 tRNAscan-SE tRNA 1182967 1183042 . + . ID=rna-NM058_06045;Parent=gene-NM058_06045;anticodon=(pos:1183000..1183002);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06045;product=tRNA-Lys CP101611.1 tRNAscan-SE exon 1182967 1183042 . + . ID=exon-NM058_06045-1;Parent=rna-NM058_06045;anticodon=(pos:1183000..1183002);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06045;product=tRNA-Lys CP101611.1 Genbank gene 1183054 1183140 . + . ID=gene-NM058_06050;Name=NM058_06050;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06050 CP101611.1 tRNAscan-SE tRNA 1183054 1183140 . + . ID=rna-NM058_06050;Parent=gene-NM058_06050;anticodon=(pos:1183088..1183090);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06050;product=tRNA-Leu CP101611.1 tRNAscan-SE exon 1183054 1183140 . + . ID=exon-NM058_06050-1;Parent=rna-NM058_06050;anticodon=(pos:1183088..1183090);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06050;product=tRNA-Leu CP101611.1 Genbank gene 1183146 1183220 . + . ID=gene-NM058_06055;Name=NM058_06055;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06055 CP101611.1 tRNAscan-SE tRNA 1183146 1183220 . + . ID=rna-NM058_06055;Parent=gene-NM058_06055;anticodon=(pos:1183178..1183180);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06055;product=tRNA-Gly CP101611.1 tRNAscan-SE exon 1183146 1183220 . + . ID=exon-NM058_06055-1;Parent=rna-NM058_06055;anticodon=(pos:1183178..1183180);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06055;product=tRNA-Gly CP101611.1 Genbank gene 1183235 1183320 . + . ID=gene-NM058_06060;Name=NM058_06060;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06060 CP101611.1 tRNAscan-SE tRNA 1183235 1183320 . + . ID=rna-NM058_06060;Parent=gene-NM058_06060;anticodon=(pos:1183269..1183271);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06060;product=tRNA-Leu CP101611.1 tRNAscan-SE exon 1183235 1183320 . + . ID=exon-NM058_06060-1;Parent=rna-NM058_06060;anticodon=(pos:1183269..1183271);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06060;product=tRNA-Leu CP101611.1 Genbank gene 1183330 1183406 . + . ID=gene-NM058_06065;Name=NM058_06065;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06065 CP101611.1 tRNAscan-SE tRNA 1183330 1183406 . + . ID=rna-NM058_06065;Parent=gene-NM058_06065;anticodon=(pos:1183364..1183366);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06065;product=tRNA-Arg CP101611.1 tRNAscan-SE exon 1183330 1183406 . + . ID=exon-NM058_06065-1;Parent=rna-NM058_06065;anticodon=(pos:1183364..1183366);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06065;product=tRNA-Arg CP101611.1 Genbank gene 1183422 1183498 . + . ID=gene-NM058_06070;Name=NM058_06070;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06070 CP101611.1 tRNAscan-SE tRNA 1183422 1183498 . + . ID=rna-NM058_06070;Parent=gene-NM058_06070;anticodon=(pos:1183456..1183458);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06070;product=tRNA-Pro CP101611.1 tRNAscan-SE exon 1183422 1183498 . + . ID=exon-NM058_06070-1;Parent=rna-NM058_06070;anticodon=(pos:1183456..1183458);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06070;product=tRNA-Pro CP101611.1 Genbank gene 1183504 1183576 . + . ID=gene-NM058_06075;Name=NM058_06075;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06075 CP101611.1 tRNAscan-SE tRNA 1183504 1183576 . + . ID=rna-NM058_06075;Parent=gene-NM058_06075;anticodon=(pos:1183537..1183539);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06075;product=tRNA-Ala CP101611.1 tRNAscan-SE exon 1183504 1183576 . + . ID=exon-NM058_06075-1;Parent=rna-NM058_06075;anticodon=(pos:1183537..1183539);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06075;product=tRNA-Ala CP101611.1 Genbank gene 1183597 1183673 . + . ID=gene-NM058_06080;Name=NM058_06080;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06080 CP101611.1 tRNAscan-SE tRNA 1183597 1183673 . + . ID=rna-NM058_06080;Parent=gene-NM058_06080;anticodon=(pos:1183631..1183633);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06080;product=tRNA-Met CP101611.1 tRNAscan-SE exon 1183597 1183673 . + . ID=exon-NM058_06080-1;Parent=rna-NM058_06080;anticodon=(pos:1183631..1183633);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06080;product=tRNA-Met CP101611.1 Genbank gene 1183676 1183752 . + . ID=gene-NM058_06085;Name=NM058_06085;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06085 CP101611.1 tRNAscan-SE tRNA 1183676 1183752 . + . ID=rna-NM058_06085;Parent=gene-NM058_06085;anticodon=(pos:1183710..1183712);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06085;product=tRNA-Ile CP101611.1 tRNAscan-SE exon 1183676 1183752 . + . ID=exon-NM058_06085-1;Parent=rna-NM058_06085;anticodon=(pos:1183710..1183712);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06085;product=tRNA-Ile CP101611.1 Genbank gene 1183759 1183851 . + . ID=gene-NM058_06090;Name=NM058_06090;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06090 CP101611.1 tRNAscan-SE tRNA 1183759 1183851 . + . ID=rna-NM058_06090;Parent=gene-NM058_06090;anticodon=(pos:1183795..1183797);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06090;product=tRNA-Ser CP101611.1 tRNAscan-SE exon 1183759 1183851 . + . ID=exon-NM058_06090-1;Parent=rna-NM058_06090;anticodon=(pos:1183795..1183797);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06090;product=tRNA-Ser CP101611.1 Genbank gene 1183869 1183945 . + . ID=gene-NM058_06095;Name=NM058_06095;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06095 CP101611.1 tRNAscan-SE tRNA 1183869 1183945 . + . ID=rna-NM058_06095;Parent=gene-NM058_06095;anticodon=(pos:1183903..1183905);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06095;product=tRNA-Met CP101611.1 tRNAscan-SE exon 1183869 1183945 . + . ID=exon-NM058_06095-1;Parent=rna-NM058_06095;anticodon=(pos:1183903..1183905);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06095;product=tRNA-Met CP101611.1 Genbank gene 1184015 1184091 . + . ID=gene-NM058_06100;Name=NM058_06100;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06100 CP101611.1 tRNAscan-SE tRNA 1184015 1184091 . + . ID=rna-NM058_06100;Parent=gene-NM058_06100;anticodon=(pos:1184049..1184051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06100;product=tRNA-Asp CP101611.1 tRNAscan-SE exon 1184015 1184091 . + . ID=exon-NM058_06100-1;Parent=rna-NM058_06100;anticodon=(pos:1184049..1184051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06100;product=tRNA-Asp CP101611.1 Genbank gene 1184104 1184179 . + . ID=gene-NM058_06105;Name=NM058_06105;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06105 CP101611.1 tRNAscan-SE tRNA 1184104 1184179 . + . ID=rna-NM058_06105;Parent=gene-NM058_06105;anticodon=(pos:1184137..1184139);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06105;product=tRNA-Phe CP101611.1 tRNAscan-SE exon 1184104 1184179 . + . ID=exon-NM058_06105-1;Parent=rna-NM058_06105;anticodon=(pos:1184137..1184139);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06105;product=tRNA-Phe CP101611.1 Genbank gene 1184201 1184276 . + . ID=gene-NM058_06110;Name=NM058_06110;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06110 CP101611.1 tRNAscan-SE tRNA 1184201 1184276 . + . ID=rna-NM058_06110;Parent=gene-NM058_06110;anticodon=(pos:1184234..1184236);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06110;product=tRNA-His CP101611.1 tRNAscan-SE exon 1184201 1184276 . + . ID=exon-NM058_06110-1;Parent=rna-NM058_06110;anticodon=(pos:1184234..1184236);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06110;product=tRNA-His CP101611.1 Genbank gene 1184287 1184360 . + . ID=gene-NM058_06115;Name=NM058_06115;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06115 CP101611.1 tRNAscan-SE tRNA 1184287 1184360 . + . ID=rna-NM058_06115;Parent=gene-NM058_06115;anticodon=(pos:1184319..1184321);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06115;product=tRNA-Gly CP101611.1 tRNAscan-SE exon 1184287 1184360 . + . ID=exon-NM058_06115-1;Parent=rna-NM058_06115;anticodon=(pos:1184319..1184321);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06115;product=tRNA-Gly CP101611.1 Genbank gene 1184376 1184452 . + . ID=gene-NM058_06120;Name=NM058_06120;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06120 CP101611.1 tRNAscan-SE tRNA 1184376 1184452 . + . ID=rna-NM058_06120;Parent=gene-NM058_06120;anticodon=(pos:1184410..1184412);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06120;product=tRNA-Ile CP101611.1 tRNAscan-SE exon 1184376 1184452 . + . ID=exon-NM058_06120-1;Parent=rna-NM058_06120;anticodon=(pos:1184410..1184412);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06120;product=tRNA-Ile CP101611.1 Genbank gene 1184465 1184539 . + . ID=gene-NM058_06125;Name=NM058_06125;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06125 CP101611.1 tRNAscan-SE tRNA 1184465 1184539 . + . ID=rna-NM058_06125;Parent=gene-NM058_06125;anticodon=(pos:1184497..1184499);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06125;product=tRNA-Asn CP101611.1 tRNAscan-SE exon 1184465 1184539 . + . ID=exon-NM058_06125-1;Parent=rna-NM058_06125;anticodon=(pos:1184497..1184499);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06125;product=tRNA-Asn CP101611.1 Genbank gene 1184543 1184633 . + . ID=gene-NM058_06130;Name=NM058_06130;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06130 CP101611.1 tRNAscan-SE tRNA 1184543 1184633 . + . ID=rna-NM058_06130;Parent=gene-NM058_06130;anticodon=(pos:1184577..1184579);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06130;product=tRNA-Ser CP101611.1 tRNAscan-SE exon 1184543 1184633 . + . ID=exon-NM058_06130-1;Parent=rna-NM058_06130;anticodon=(pos:1184577..1184579);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06130;product=tRNA-Ser CP101611.1 Genbank gene 1184664 1184735 . + . ID=gene-NM058_06135;Name=NM058_06135;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_06135 CP101611.1 tRNAscan-SE tRNA 1184664 1184735 . + . ID=rna-NM058_06135;Parent=gene-NM058_06135;anticodon=(pos:1184697..1184699);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06135;product=tRNA-Glu CP101611.1 tRNAscan-SE exon 1184664 1184735 . + . ID=exon-NM058_06135-1;Parent=rna-NM058_06135;anticodon=(pos:1184697..1184699);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_06135;product=tRNA-Glu CP101611.1 Genbank pseudogene 1184967 1186842 . + . ID=gene-NM058_06140;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=pseudogene;locus_tag=NM058_06140;pseudo=true CP101611.1 Protein Homology CDS 1184967 1186842 . + 0 ID=cds-NM058_06140;Parent=gene-NM058_06140;Note=frameshifted;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010329480.1;locus_tag=NM058_06140;product=1%2C4-alpha-glucan branching enzyme;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1186847 1187989 . + . ID=gene-NM058_06145;Name=NM058_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06145 CP101611.1 Protein Homology CDS 1186847 1187989 . + 0 ID=cds-UTX06175.1;Parent=gene-NM058_06145;Dbxref=NCBI_GP:UTX06175.1;Name=UTX06175.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390975.1;locus_tag=NM058_06145;product=glucose-1-phosphate adenylyltransferase;protein_id=UTX06175.1;transl_table=11 CP101611.1 Genbank pseudogene 1188012 1189040 . + . ID=gene-NM058_06150;Name=glgD;gbkey=Gene;gene=glgD;gene_biotype=pseudogene;locus_tag=NM058_06150;pseudo=true CP101611.1 Protein Homology CDS 1188012 1189040 . + 0 ID=cds-NM058_06150;Parent=gene-NM058_06150;Note=frameshifted;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgD;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390974.1;locus_tag=NM058_06150;product=glucose-1-phosphate adenylyltransferase subunit GlgD;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1189037 1190490 . + . ID=gene-NM058_06155;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=pseudogene;locus_tag=NM058_06155;pseudo=true CP101611.1 Protein Homology CDS 1189037 1190490 . + 0 ID=cds-NM058_06155;Parent=gene-NM058_06155;Note=frameshifted;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=glycogen (starch) synthase activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390973.1;locus_tag=NM058_06155;product=glycogen synthase GlgA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1190477 1192873 . + . ID=gene-NM058_06160;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=NM058_06160 CP101611.1 Protein Homology CDS 1190477 1192873 . + 0 ID=cds-UTX06176.1;Parent=gene-NM058_06160;Dbxref=NCBI_GP:UTX06176.1;Name=UTX06176.1;gbkey=CDS;gene=glgP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390972.1;locus_tag=NM058_06160;product=glycogen phosphorylase GlgP;protein_id=UTX06176.1;transl_table=11 CP101611.1 Genbank gene 1192904 1193371 . - . ID=gene-NM058_06165;Name=NM058_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06165 CP101611.1 Protein Homology CDS 1192904 1193371 . - 0 ID=cds-UTX06177.1;Parent=gene-NM058_06165;Dbxref=NCBI_GP:UTX06177.1;Name=UTX06177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390971.1;locus_tag=NM058_06165;product=TspO/MBR family protein;protein_id=UTX06177.1;transl_table=11 CP101611.1 Genbank gene 1193481 1194200 . - . ID=gene-NM058_06170;Name=NM058_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06170 CP101611.1 Protein Homology CDS 1193481 1194200 . - 0 ID=cds-UTX06178.1;Parent=gene-NM058_06170;Dbxref=NCBI_GP:UTX06178.1;Name=UTX06178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390962.2;locus_tag=NM058_06170;product=yteA family sporulation protein;protein_id=UTX06178.1;transl_table=11 CP101611.1 Genbank pseudogene 1194492 1195905 . + . ID=gene-NM058_06175;Name=NM058_06175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06175;pseudo=true CP101611.1 Protein Homology CDS 1194492 1195905 . + 0 ID=cds-NM058_06175;Parent=gene-NM058_06175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390961.1;locus_tag=NM058_06175;product=isochorismate synthase MenF;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1195902 1197644 . + . ID=gene-NM058_06180;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=NM058_06180 CP101611.1 Protein Homology CDS 1195902 1197644 . + 0 ID=cds-UTX06179.1;Parent=gene-NM058_06180;Dbxref=NCBI_GP:UTX06179.1;Name=UTX06179.1;Ontology_term=GO:0009234,GO:0070204;gbkey=CDS;gene=menD;go_function=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390960.1;locus_tag=NM058_06180;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=UTX06179.1;transl_table=11 CP101611.1 Genbank gene 1197632 1198456 . + . ID=gene-NM058_06185;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=NM058_06185 CP101611.1 Protein Homology CDS 1197632 1198456 . + 0 ID=cds-UTX06180.1;Parent=gene-NM058_06185;Dbxref=NCBI_GP:UTX06180.1;Name=UTX06180.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390959.1;locus_tag=NM058_06185;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=UTX06180.1;transl_table=11 CP101611.1 Genbank gene 1198491 1199309 . + . ID=gene-NM058_06190;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=NM058_06190 CP101611.1 Protein Homology CDS 1198491 1199309 . + 0 ID=cds-UTX06181.1;Parent=gene-NM058_06190;Dbxref=NCBI_GP:UTX06181.1;Name=UTX06181.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016938465.1;locus_tag=NM058_06190;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=UTX06181.1;transl_table=11 CP101611.1 Genbank gene 1199400 1200860 . + . ID=gene-NM058_06195;Name=NM058_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06195 CP101611.1 Protein Homology CDS 1199400 1200860 . + 0 ID=cds-UTX06182.1;Parent=gene-NM058_06195;Dbxref=NCBI_GP:UTX06182.1;Name=UTX06182.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390957.1;locus_tag=NM058_06195;product=o-succinylbenzoate--CoA ligase;protein_id=UTX06182.1;transl_table=11 CP101611.1 Genbank gene 1200857 1201972 . + . ID=gene-NM058_06200;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=NM058_06200 CP101611.1 Protein Homology CDS 1200857 1201972 . + 0 ID=cds-UTX06183.1;Parent=gene-NM058_06200;Dbxref=NCBI_GP:UTX06183.1;Name=UTX06183.1;Ontology_term=GO:0009234,GO:0016836;gbkey=CDS;gene=menC;go_function=hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390956.1;locus_tag=NM058_06200;product=o-succinylbenzoate synthase;protein_id=UTX06183.1;transl_table=11 CP101611.1 Genbank gene 1202253 1203173 . + . ID=gene-NM058_06205;Name=mntA;gbkey=Gene;gene=mntA;gene_biotype=protein_coding;locus_tag=NM058_06205 CP101611.1 Protein Homology CDS 1202253 1203173 . + 0 ID=cds-UTX06184.1;Parent=gene-NM058_06205;Dbxref=NCBI_GP:UTX06184.1;Name=UTX06184.1;gbkey=CDS;gene=mntA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390955.1;locus_tag=NM058_06205;product=manganese ABC transporter substrate-binding protein/adhesin MntA;protein_id=UTX06184.1;transl_table=11 CP101611.1 Genbank gene 1203192 1203941 . + . ID=gene-NM058_06210;Name=mntB;gbkey=Gene;gene=mntB;gene_biotype=protein_coding;locus_tag=NM058_06210 CP101611.1 Protein Homology CDS 1203192 1203941 . + 0 ID=cds-UTX06185.1;Parent=gene-NM058_06210;Dbxref=NCBI_GP:UTX06185.1;Name=UTX06185.1;gbkey=CDS;gene=mntB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019715482.1;locus_tag=NM058_06210;product=manganese ABC transporter ATP-binding protein MntB;protein_id=UTX06185.1;transl_table=11 CP101611.1 Genbank pseudogene 1203947 1205252 . + . ID=gene-NM058_06215;Name=NM058_06215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06215;pseudo=true CP101611.1 Protein Homology CDS 1203947 1205252 . + 0 ID=cds-NM058_06215;Parent=gene-NM058_06215;Note=frameshifted;Ontology_term=GO:0055085,GO:0042626,GO:0005887,GO:0043190;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390953.1;locus_tag=NM058_06215;product=metal ABC transporter permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1205242 1206129 . + . ID=gene-NM058_06220;Name=mntD;gbkey=Gene;gene=mntD;gene_biotype=protein_coding;locus_tag=NM058_06220 CP101611.1 Protein Homology CDS 1205242 1206129 . + 0 ID=cds-UTX06186.1;Parent=gene-NM058_06220;Dbxref=NCBI_GP:UTX06186.1;Name=UTX06186.1;gbkey=CDS;gene=mntD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390952.1;locus_tag=NM058_06220;product=manganese ABC transporter permease MntD;protein_id=UTX06186.1;transl_table=11 CP101611.1 Genbank gene 1206148 1206306 . - . ID=gene-NM058_06225;Name=NM058_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06225 CP101611.1 Protein Homology CDS 1206148 1206306 . - 0 ID=cds-UTX06187.1;Parent=gene-NM058_06225;Dbxref=NCBI_GP:UTX06187.1;Name=UTX06187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097775.1;locus_tag=NM058_06225;product=DUF1540 domain-containing protein;protein_id=UTX06187.1;transl_table=11 CP101611.1 Genbank gene 1206360 1207400 . - . ID=gene-NM058_06230;Name=NM058_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06230 CP101611.1 Protein Homology CDS 1206360 1207400 . - 0 ID=cds-UTX06188.1;Parent=gene-NM058_06230;Dbxref=NCBI_GP:UTX06188.1;Name=UTX06188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390950.1;locus_tag=NM058_06230;product=cytochrome d ubiquinol oxidase subunit II;protein_id=UTX06188.1;transl_table=11 CP101611.1 Genbank pseudogene 1207443 1208773 . - . ID=gene-NM058_06235;Name=NM058_06235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06235;pseudo=true CP101611.1 Protein Homology CDS 1207443 1208773 . - 0 ID=cds-NM058_06235;Parent=gene-NM058_06235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390949.2;locus_tag=NM058_06235;product=cytochrome ubiquinol oxidase subunit I;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1208979 1209227 . + . ID=gene-NM058_06240;Name=NM058_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06240 CP101611.1 Protein Homology CDS 1208979 1209227 . + 0 ID=cds-UTX06189.1;Parent=gene-NM058_06240;Dbxref=NCBI_GP:UTX06189.1;Name=UTX06189.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390948.1;locus_tag=NM058_06240;product=type B 50S ribosomal protein L31;protein_id=UTX06189.1;transl_table=11 CP101611.1 Genbank gene 1209347 1209910 . + . ID=gene-NM058_06245;Name=NM058_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06245 CP101611.1 Protein Homology CDS 1209347 1209910 . + 0 ID=cds-UTX06190.1;Parent=gene-NM058_06245;Dbxref=NCBI_GP:UTX06190.1;Name=UTX06190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014665093.1;locus_tag=NM058_06245;product=carbonic anhydrase;protein_id=UTX06190.1;transl_table=11 CP101611.1 Genbank gene 1209907 1210134 . - . ID=gene-NM058_06250;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=NM058_06250 CP101611.1 Protein Homology CDS 1209907 1210134 . - 0 ID=cds-UTX06191.1;Parent=gene-NM058_06250;Dbxref=NCBI_GP:UTX06191.1;Name=UTX06191.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390946.1;locus_tag=NM058_06250;product=membrane protein insertion efficiency factor YidD;protein_id=UTX06191.1;transl_table=11 CP101611.1 Genbank gene 1210262 1210735 . + . ID=gene-NM058_06255;Name=NM058_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06255 CP101611.1 Protein Homology CDS 1210262 1210735 . + 0 ID=cds-UTX06192.1;Parent=gene-NM058_06255;Dbxref=NCBI_GP:UTX06192.1;Name=UTX06192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390945.1;locus_tag=NM058_06255;product=S-ribosylhomocysteine lyase;protein_id=UTX06192.1;transl_table=11 CP101611.1 Genbank gene 1210856 1211293 . + . ID=gene-NM058_06260;Name=NM058_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06260 CP101611.1 Protein Homology CDS 1210856 1211293 . + 0 ID=cds-UTX06193.1;Parent=gene-NM058_06260;Dbxref=NCBI_GP:UTX06193.1;Name=UTX06193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390944.1;locus_tag=NM058_06260;product=FixH family protein;protein_id=UTX06193.1;transl_table=11 CP101611.1 Genbank gene 1211287 1211427 . - . ID=gene-NM058_06265;Name=ytzI;gbkey=Gene;gene=ytzI;gene_biotype=protein_coding;locus_tag=NM058_06265 CP101611.1 Protein Homology CDS 1211287 1211427 . - 0 ID=cds-UTX06194.1;Parent=gene-NM058_06265;Dbxref=NCBI_GP:UTX06194.1;Name=UTX06194.1;gbkey=CDS;gene=ytzI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003229081.1;locus_tag=NM058_06265;product=YtzI protein;protein_id=UTX06194.1;transl_table=11 CP101611.1 Genbank gene 1211558 1211995 . + . ID=gene-NM058_06270;Name=NM058_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06270 CP101611.1 Protein Homology CDS 1211558 1211995 . + 0 ID=cds-UTX06195.1;Parent=gene-NM058_06270;Dbxref=NCBI_GP:UTX06195.1;Name=UTX06195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390943.1;locus_tag=NM058_06270;product=DNA starvation/stationary phase protection protein;protein_id=UTX06195.1;transl_table=11 CP101611.1 Genbank gene 1212162 1212566 . + . ID=gene-NM058_06275;Name=NM058_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06275 CP101611.1 Protein Homology CDS 1212162 1212566 . + 0 ID=cds-UTX06196.1;Parent=gene-NM058_06275;Dbxref=NCBI_GP:UTX06196.1;Name=UTX06196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390942.1;locus_tag=NM058_06275;product=holin family protein;protein_id=UTX06196.1;transl_table=11 CP101611.1 Genbank gene 1212778 1213254 . + . ID=gene-NM058_06280;Name=ytkD;gbkey=Gene;gene=ytkD;gene_biotype=protein_coding;locus_tag=NM058_06280 CP101611.1 Protein Homology CDS 1212778 1213254 . + 0 ID=cds-UTX06197.1;Parent=gene-NM058_06280;Dbxref=NCBI_GP:UTX06197.1;Name=UTX06197.1;Ontology_term=GO:0006139,GO:0017111;gbkey=CDS;gene=ytkD;go_function=nucleoside-triphosphatase activity|0017111||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390941.1;locus_tag=NM058_06280;product=nucleoside triphosphatase YtkD;protein_id=UTX06197.1;transl_table=11 CP101611.1 Genbank pseudogene 1213282 1214093 . - . ID=gene-NM058_06285;Name=NM058_06285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06285;pseudo=true CP101611.1 Protein Homology CDS 1213282 1214093 . - 0 ID=cds-NM058_06285;Parent=gene-NM058_06285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390940.1;locus_tag=NM058_06285;product=ABC transporter permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1214068 1214850 . - . ID=gene-NM058_06290;Name=NM058_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06290 CP101611.1 Protein Homology CDS 1214068 1214850 . - 0 ID=cds-UTX06198.1;Parent=gene-NM058_06290;Dbxref=NCBI_GP:UTX06198.1;Name=UTX06198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390939.1;locus_tag=NM058_06290;product=ABC transporter ATP-binding protein;protein_id=UTX06198.1;transl_table=11 CP101611.1 Genbank gene 1214863 1215867 . - . ID=gene-NM058_06295;Name=NM058_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06295 CP101611.1 Protein Homology CDS 1214863 1215867 . - 0 ID=cds-UTX06199.1;Parent=gene-NM058_06295;Dbxref=NCBI_GP:UTX06199.1;Name=UTX06199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390937.2;locus_tag=NM058_06295;product=ABC transporter substrate-binding protein;protein_id=UTX06199.1;transl_table=11 CP101611.1 Genbank gene 1216018 1216791 . + . ID=gene-NM058_06300;Name=NM058_06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06300 CP101611.1 Protein Homology CDS 1216018 1216791 . + 0 ID=cds-UTX06200.1;Parent=gene-NM058_06300;Dbxref=NCBI_GP:UTX06200.1;Name=UTX06200.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390936.1;locus_tag=NM058_06300;product=prolyl oligopeptidase family serine peptidase;protein_id=UTX06200.1;transl_table=11 CP101611.1 Genbank gene 1216843 1217085 . + . ID=gene-NM058_06305;Name=NM058_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06305 CP101611.1 Protein Homology CDS 1216843 1217085 . + 0 ID=cds-UTX06201.1;Parent=gene-NM058_06305;Dbxref=NCBI_GP:UTX06201.1;Name=UTX06201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390935.1;locus_tag=NM058_06305;product=DUF2584 domain-containing protein;protein_id=UTX06201.1;transl_table=11 CP101611.1 Genbank gene 1217124 1218707 . - . ID=gene-NM058_06310;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=NM058_06310 CP101611.1 Protein Homology CDS 1217124 1218707 . - 0 ID=cds-UTX06202.1;Parent=gene-NM058_06310;Dbxref=NCBI_GP:UTX06202.1;Name=UTX06202.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390934.2;locus_tag=NM058_06310;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=UTX06202.1;transl_table=11 CP101611.1 cmsearch riboswitch 1218905 1219043 . + . ID=id-CP101611.1:1218905..1219043;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank pseudogene 1219213 1220413 . + . ID=gene-NM058_06315;Name=metK;gbkey=Gene;gene=metK;gene_biotype=pseudogene;locus_tag=NM058_06315;pseudo=true CP101611.1 Protein Homology CDS 1219213 1220413 . + 0 ID=cds-NM058_06315;Parent=gene-NM058_06315;Note=frameshifted;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390933.1;locus_tag=NM058_06315;product=methionine adenosyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1220562 1222460 . + . ID=gene-NM058_06320;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=NM058_06320 CP101611.1 Protein Homology CDS 1220562 1222460 . + 0 ID=cds-UTX06203.1;Parent=gene-NM058_06320;Dbxref=NCBI_GP:UTX06203.1;Name=UTX06203.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390932.1;locus_tag=NM058_06320;product=asparagine synthase (glutamine-hydrolyzing);protein_id=UTX06203.1;transl_table=11 CP101611.1 Genbank gene 1222587 1223978 . + . ID=gene-NM058_06325;Name=alaP;gbkey=Gene;gene=alaP;gene_biotype=protein_coding;locus_tag=NM058_06325 CP101611.1 Protein Homology CDS 1222587 1223978 . + 0 ID=cds-UTX06204.1;Parent=gene-NM058_06325;Dbxref=NCBI_GP:UTX06204.1;Name=UTX06204.1;gbkey=CDS;gene=alaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390931.1;locus_tag=NM058_06325;product=alanine permease AlaP;protein_id=UTX06204.1;transl_table=11 CP101611.1 Genbank gene 1224237 1224752 . - . ID=gene-NM058_06330;Name=NM058_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06330 CP101611.1 Protein Homology CDS 1224237 1224752 . - 0 ID=cds-UTX06205.1;Parent=gene-NM058_06330;Dbxref=NCBI_GP:UTX06205.1;Name=UTX06205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390930.1;locus_tag=NM058_06330;product=gamma carbonic anhydrase family protein;protein_id=UTX06205.1;transl_table=11 CP101611.1 Genbank gene 1224801 1225580 . + . ID=gene-NM058_06335;Name=ytpA;gbkey=Gene;gene=ytpA;gene_biotype=protein_coding;locus_tag=NM058_06335 CP101611.1 Protein Homology CDS 1224801 1225580 . + 0 ID=cds-UTX06206.1;Parent=gene-NM058_06335;Dbxref=NCBI_GP:UTX06206.1;Name=UTX06206.1;gbkey=CDS;gene=ytpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390929.1;locus_tag=NM058_06335;product=phospholipase YtpA;protein_id=UTX06206.1;transl_table=11 CP101611.1 Genbank gene 1225601 1226704 . + . ID=gene-NM058_06340;Name=tbcS;gbkey=Gene;gene=tbcS;gene_biotype=protein_coding;gene_synonym=ytpB;locus_tag=NM058_06340 CP101611.1 Protein Homology CDS 1225601 1226704 . + 0 ID=cds-UTX06207.1;Parent=gene-NM058_06340;Dbxref=NCBI_GP:UTX06207.1;Name=UTX06207.1;gbkey=CDS;gene=tbcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390928.1;locus_tag=NM058_06340;product=tetraprenyl-beta-curcumene synthase;protein_id=UTX06207.1;transl_table=11 CP101611.1 Genbank gene 1226694 1227278 . - . ID=gene-NM058_06345;Name=NM058_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06345 CP101611.1 Protein Homology CDS 1226694 1227278 . - 0 ID=cds-UTX06208.1;Parent=gene-NM058_06345;Dbxref=NCBI_GP:UTX06208.1;Name=UTX06208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390927.1;locus_tag=NM058_06345;product=class I SAM-dependent methyltransferase;protein_id=UTX06208.1;transl_table=11 CP101611.1 Genbank gene 1227275 1228243 . - . ID=gene-NM058_06350;Name=NM058_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06350 CP101611.1 Protein Homology CDS 1227275 1228243 . - 0 ID=cds-UTX06209.1;Parent=gene-NM058_06350;Dbxref=NCBI_GP:UTX06209.1;Name=UTX06209.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390926.1;locus_tag=NM058_06350;product=TIGR01212 family radical SAM protein;protein_id=UTX06209.1;transl_table=11 CP101611.1 Genbank gene 1228405 1228677 . + . ID=gene-NM058_06355;Name=NM058_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06355 CP101611.1 Protein Homology CDS 1228405 1228677 . + 0 ID=cds-UTX06210.1;Parent=gene-NM058_06355;Dbxref=NCBI_GP:UTX06210.1;Name=UTX06210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390925.1;locus_tag=NM058_06355;product=YtzC family protein;protein_id=UTX06210.1;transl_table=11 CP101611.1 Genbank gene 1228833 1228970 . + . ID=gene-NM058_06360;Name=NM058_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06360 CP101611.1 Protein Homology CDS 1228833 1228970 . + 0 ID=cds-UTX06211.1;Parent=gene-NM058_06360;Dbxref=NCBI_GP:UTX06211.1;Name=UTX06211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513999.1;locus_tag=NM058_06360;product=hypothetical protein;protein_id=UTX06211.1;transl_table=11 CP101611.1 Genbank gene 1229003 1229395 . + . ID=gene-NM058_06365;Name=ytrA;gbkey=Gene;gene=ytrA;gene_biotype=protein_coding;locus_tag=NM058_06365 CP101611.1 Protein Homology CDS 1229003 1229395 . + 0 ID=cds-UTX06212.1;Parent=gene-NM058_06365;Dbxref=NCBI_GP:UTX06212.1;Name=UTX06212.1;Ontology_term=GO:0003700;gbkey=CDS;gene=ytrA;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390924.1;locus_tag=NM058_06365;product=GntR family transcriptional regulator YtrA;protein_id=UTX06212.1;transl_table=11 CP101611.1 Genbank gene 1229388 1230266 . + . ID=gene-NM058_06370;Name=ytrB;gbkey=Gene;gene=ytrB;gene_biotype=protein_coding;locus_tag=NM058_06370 CP101611.1 Protein Homology CDS 1229388 1230266 . + 0 ID=cds-UTX06213.1;Parent=gene-NM058_06370;Dbxref=NCBI_GP:UTX06213.1;Name=UTX06213.1;gbkey=CDS;gene=ytrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390923.1;locus_tag=NM058_06370;product=ABC transporter ATP-binding protein YtrB;protein_id=UTX06213.1;transl_table=11 CP101611.1 Genbank gene 1230260 1231246 . + . ID=gene-NM058_06375;Name=ytrC;gbkey=Gene;gene=ytrC;gene_biotype=protein_coding;locus_tag=NM058_06375 CP101611.1 Protein Homology CDS 1230260 1231246 . + 0 ID=cds-UTX06214.1;Parent=gene-NM058_06375;Dbxref=NCBI_GP:UTX06214.1;Name=UTX06214.1;gbkey=CDS;gene=ytrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003238013.1;locus_tag=NM058_06375;product=ABC transporter permease YtrC;protein_id=UTX06214.1;transl_table=11 CP101611.1 Genbank pseudogene 1231276 1232249 . + . ID=gene-NM058_06380;Name=NM058_06380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06380;pseudo=true CP101611.1 Protein Homology CDS 1231276 1232249 . + 0 ID=cds-NM058_06380;Parent=gene-NM058_06380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390921.1;locus_tag=NM058_06380;product=ABC transporter permease;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1232264 1232957 . + . ID=gene-NM058_06385;Name=ytrE;gbkey=Gene;gene=ytrE;gene_biotype=pseudogene;locus_tag=NM058_06385;pseudo=true CP101611.1 Protein Homology CDS 1232264 1232957 . + 0 ID=cds-NM058_06385;Parent=gene-NM058_06385;Note=frameshifted;gbkey=CDS;gene=ytrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390920.1;locus_tag=NM058_06385;product=ABC transporter ATP-binding protein YtrE;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1232947 1234257 . + . ID=gene-NM058_06390;Name=ytrF;gbkey=Gene;gene=ytrF;gene_biotype=protein_coding;locus_tag=NM058_06390 CP101611.1 Protein Homology CDS 1232947 1234257 . + 0 ID=cds-UTX06215.1;Parent=gene-NM058_06390;Dbxref=NCBI_GP:UTX06215.1;Name=UTX06215.1;gbkey=CDS;gene=ytrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390919.1;locus_tag=NM058_06390;product=ABC transporter permease YtrF;protein_id=UTX06215.1;transl_table=11 CP101611.1 Genbank gene 1234354 1235049 . + . ID=gene-NM058_06395;Name=bceR;gbkey=Gene;gene=bceR;gene_biotype=protein_coding;locus_tag=NM058_06395 CP101611.1 Protein Homology CDS 1234354 1235049 . + 0 ID=cds-UTX06982.1;Parent=gene-NM058_06395;Dbxref=NCBI_GP:UTX06982.1;Name=UTX06982.1;gbkey=CDS;gene=bceR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390918.1;locus_tag=NM058_06395;product=two-component response regulator BceR;protein_id=UTX06982.1;transl_table=11 CP101611.1 Genbank pseudogene 1235042 1236044 . + . ID=gene-NM058_06400;Name=NM058_06400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06400;pseudo=true CP101611.1 Protein Homology CDS 1235042 1236044 . + 0 ID=cds-NM058_06400;Parent=gene-NM058_06400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390917.1;locus_tag=NM058_06400;product=HAMP domain-containing histidine kinase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1236145 1236906 . + . ID=gene-NM058_06405;Name=bceA;gbkey=Gene;gene=bceA;gene_biotype=protein_coding;locus_tag=NM058_06405 CP101611.1 Protein Homology CDS 1236145 1236906 . + 0 ID=cds-UTX06216.1;Parent=gene-NM058_06405;Dbxref=NCBI_GP:UTX06216.1;Name=UTX06216.1;gbkey=CDS;gene=bceA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390916.1;locus_tag=NM058_06405;product=bacitracin ABC transporter ATP-binding protein BceA;protein_id=UTX06216.1;transl_table=11 CP101611.1 Genbank gene 1236896 1238836 . + . ID=gene-NM058_06410;Name=NM058_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06410 CP101611.1 Protein Homology CDS 1236896 1238836 . + 0 ID=cds-UTX06217.1;Parent=gene-NM058_06410;Dbxref=NCBI_GP:UTX06217.1;Name=UTX06217.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390915.1;locus_tag=NM058_06410;product=FtsX-like permease family protein;protein_id=UTX06217.1;transl_table=11 CP101611.1 Genbank pseudogene 1238873 1239618 . - . ID=gene-NM058_06415;Name=NM058_06415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06415;pseudo=true CP101611.1 Protein Homology CDS 1238873 1239618 . - 0 ID=cds-NM058_06415;Parent=gene-NM058_06415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390914.2;locus_tag=NM058_06415;product=LMBR1 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1239807 1241000 . + . ID=gene-NM058_06420;Name=NM058_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06420 CP101611.1 Protein Homology CDS 1239807 1241000 . + 0 ID=cds-UTX06218.1;Parent=gene-NM058_06420;Dbxref=NCBI_GP:UTX06218.1;Name=UTX06218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390913.1;locus_tag=NM058_06420;product=MFS transporter;protein_id=UTX06218.1;transl_table=11 CP101611.1 Genbank gene 1241032 1241817 . - . ID=gene-NM058_06425;Name=NM058_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06425 CP101611.1 Protein Homology CDS 1241032 1241817 . - 0 ID=cds-UTX06219.1;Parent=gene-NM058_06425;Dbxref=NCBI_GP:UTX06219.1;Name=UTX06219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390912.1;locus_tag=NM058_06425;product=blue-light photoreceptor;protein_id=UTX06219.1;transl_table=11 CP101611.1 Genbank gene 1242220 1242555 . + . ID=gene-NM058_06430;Name=NM058_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06430 CP101611.1 Protein Homology CDS 1242220 1242555 . + 0 ID=cds-UTX06983.1;Parent=gene-NM058_06430;Dbxref=NCBI_GP:UTX06983.1;Name=UTX06983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390911.3;locus_tag=NM058_06430;product=DUF4257 domain-containing protein;protein_id=UTX06983.1;transl_table=11 CP101611.1 cmsearch binding_site 1242659 1242873 . + . ID=id-CP101611.1:1242659..1242873;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 CP101611.1 Genbank pseudogene 1242982 1245392 . + . ID=gene-NM058_06435;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=pseudogene;locus_tag=NM058_06435;pseudo=true CP101611.1 Protein Homology CDS 1242982 1245392 . + 0 ID=cds-NM058_06435;Parent=gene-NM058_06435;Note=frameshifted;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390910.1;locus_tag=NM058_06435;product=leucine--tRNA ligase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1245507 1245818 . + . ID=gene-NM058_06440;Name=NM058_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06440 CP101611.1 Protein Homology CDS 1245507 1245818 . + 0 ID=cds-UTX06220.1;Parent=gene-NM058_06440;Dbxref=NCBI_GP:UTX06220.1;Name=UTX06220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390909.2;locus_tag=NM058_06440;product=rhodanese-like domain-containing protein;protein_id=UTX06220.1;transl_table=11 CP101611.1 Genbank pseudogene 1245841 1247138 . - . ID=gene-NM058_06445;Name=melA;gbkey=Gene;gene=melA;gene_biotype=pseudogene;locus_tag=NM058_06445;pseudo=true CP101611.1 Protein Homology CDS 1245841 1247138 . - 0 ID=cds-NM058_06445;Parent=gene-NM058_06445;Note=frameshifted;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390908.1;locus_tag=NM058_06445;product=alpha-galactosidase MelA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1247158 1247988 . - . ID=gene-NM058_06450;Name=NM058_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06450 CP101611.1 Protein Homology CDS 1247158 1247988 . - 0 ID=cds-UTX06221.1;Parent=gene-NM058_06450;Dbxref=NCBI_GP:UTX06221.1;Name=UTX06221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390907.1;locus_tag=NM058_06450;product=carbohydrate ABC transporter permease;protein_id=UTX06221.1;transl_table=11 CP101611.1 Genbank pseudogene 1247985 1248895 . - . ID=gene-NM058_06455;Name=NM058_06455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06455;pseudo=true CP101611.1 Protein Homology CDS 1247985 1248895 . - 0 ID=cds-NM058_06455;Parent=gene-NM058_06455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390906.1;locus_tag=NM058_06455;product=sugar ABC transporter permease;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1248888 1250165 . - . ID=gene-NM058_06460;Name=NM058_06460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06460;pseudo=true CP101611.1 Protein Homology CDS 1248888 1250165 . - 0 ID=cds-NM058_06460;Parent=gene-NM058_06460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390905.1;locus_tag=NM058_06460;product=extracellular solute-binding protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1250199 1251233 . - . ID=gene-NM058_06465;Name=NM058_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06465 CP101611.1 Protein Homology CDS 1250199 1251233 . - 0 ID=cds-UTX06222.1;Parent=gene-NM058_06465;Dbxref=NCBI_GP:UTX06222.1;Name=UTX06222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390904.1;locus_tag=NM058_06465;product=LacI family DNA-binding transcriptional regulator;protein_id=UTX06222.1;transl_table=11 CP101611.1 Genbank gene 1251451 1252350 . + . ID=gene-NM058_06470;Name=NM058_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06470 CP101611.1 Protein Homology CDS 1251451 1252350 . + 0 ID=cds-UTX06223.1;Parent=gene-NM058_06470;Dbxref=NCBI_GP:UTX06223.1;Name=UTX06223.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390903.1;locus_tag=NM058_06470;product=dienelactone hydrolase family protein;protein_id=UTX06223.1;transl_table=11 CP101611.1 Genbank pseudogene 1252406 1252905 . + . ID=gene-NM058_06475;Name=NM058_06475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06475;pseudo=true CP101611.1 Protein Homology CDS 1252406 1252905 . + 0 ID=cds-NM058_06475;Parent=gene-NM058_06475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010329546.1;locus_tag=NM058_06475;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1253106 1253882 . + . ID=gene-NM058_06480;Name=bioW;gbkey=Gene;gene=bioW;gene_biotype=protein_coding;locus_tag=NM058_06480 CP101611.1 Protein Homology CDS 1253106 1253882 . + 0 ID=cds-UTX06224.1;Parent=gene-NM058_06480;Dbxref=NCBI_GP:UTX06224.1;Name=UTX06224.1;Ontology_term=GO:0009102,GO:0042410;gbkey=CDS;gene=bioW;go_function=6-carboxyhexanoate-CoA ligase activity|0042410||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259228.1;locus_tag=NM058_06480;product=6-carboxyhexanoate--CoA ligase;protein_id=UTX06224.1;transl_table=11 CP101611.1 Genbank gene 1253872 1255218 . + . ID=gene-NM058_06485;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=NM058_06485 CP101611.1 Protein Homology CDS 1253872 1255218 . + 0 ID=cds-UTX06225.1;Parent=gene-NM058_06485;Dbxref=NCBI_GP:UTX06225.1;Name=UTX06225.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390901.1;locus_tag=NM058_06485;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=UTX06225.1;transl_table=11 CP101611.1 Genbank gene 1255208 1256377 . + . ID=gene-NM058_06490;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=NM058_06490 CP101611.1 Protein Homology CDS 1255208 1256377 . + 0 ID=cds-UTX06226.1;Parent=gene-NM058_06490;Dbxref=NCBI_GP:UTX06226.1;Name=UTX06226.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390900.1;locus_tag=NM058_06490;product=8-amino-7-oxononanoate synthase;protein_id=UTX06226.1;transl_table=11 CP101611.1 Genbank gene 1256374 1257069 . + . ID=gene-NM058_06495;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=NM058_06495 CP101611.1 Protein Homology CDS 1256374 1257069 . + 0 ID=cds-UTX06227.1;Parent=gene-NM058_06495;Dbxref=NCBI_GP:UTX06227.1;Name=UTX06227.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390899.1;locus_tag=NM058_06495;product=dethiobiotin synthase;protein_id=UTX06227.1;transl_table=11 CP101611.1 Genbank gene 1257072 1258079 . + . ID=gene-NM058_06500;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=NM058_06500 CP101611.1 Protein Homology CDS 1257072 1258079 . + 0 ID=cds-UTX06228.1;Parent=gene-NM058_06500;Dbxref=NCBI_GP:UTX06228.1;Name=UTX06228.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390898.1;locus_tag=NM058_06500;product=biotin synthase BioB;protein_id=UTX06228.1;transl_table=11 CP101611.1 Genbank gene 1258148 1259335 . + . ID=gene-NM058_06505;Name=NM058_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06505 CP101611.1 Protein Homology CDS 1258148 1259335 . + 0 ID=cds-UTX06229.1;Parent=gene-NM058_06505;Dbxref=NCBI_GP:UTX06229.1;Name=UTX06229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390897.1;locus_tag=NM058_06505;product=cytochrome P450;protein_id=UTX06229.1;transl_table=11 CP101611.1 Genbank gene 1259412 1260173 . + . ID=gene-NM058_06510;Name=NM058_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06510 CP101611.1 Protein Homology CDS 1259412 1260173 . + 0 ID=cds-UTX06230.1;Parent=gene-NM058_06510;Dbxref=NCBI_GP:UTX06230.1;Name=UTX06230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390896.2;locus_tag=NM058_06510;product=NAD(P)-dependent oxidoreductase;protein_id=UTX06230.1;transl_table=11 CP101611.1 Genbank pseudogene 1260381 1261237 . + . ID=gene-NM058_06515;Name=NM058_06515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06515;pseudo=true CP101611.1 Protein Homology CDS 1260381 1261237 . + 0 ID=cds-NM058_06515;Parent=gene-NM058_06515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390895.1;locus_tag=NM058_06515;product=carbohydrate ABC transporter permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1261261 1262757 . + . ID=gene-NM058_06520;Name=NM058_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06520 CP101611.1 Protein Homology CDS 1261261 1262757 . + 0 ID=cds-UTX06231.1;Parent=gene-NM058_06520;Dbxref=NCBI_GP:UTX06231.1;Name=UTX06231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390894.3;locus_tag=NM058_06520;product=extracellular solute-binding protein;protein_id=UTX06231.1;transl_table=11 CP101611.1 Genbank pseudogene 1262798 1265112 . - . ID=gene-NM058_06525;Name=NM058_06525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06525;pseudo=true CP101611.1 Protein Homology CDS 1262798 1265112 . - 0 ID=cds-NM058_06525;Parent=gene-NM058_06525;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390893.1;locus_tag=NM058_06525;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1265328 1266292 . + . ID=gene-NM058_06530;Name=rmgP;gbkey=Gene;gene=rmgP;gene_biotype=pseudogene;locus_tag=NM058_06530;pseudo=true CP101611.1 Protein Homology CDS 1265328 1266292 . + 0 ID=cds-NM058_06530;Parent=gene-NM058_06530;Note=frameshifted;gbkey=CDS;gene=rmgP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390892.2;locus_tag=NM058_06530;product=polygalacturonan/rhamnogalacturonan ABC transporter permease;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1266300 1267420 . + . ID=gene-NM058_06535;Name=rmgQ;gbkey=Gene;gene=rmgQ;gene_biotype=pseudogene;gene_synonym=yteR;locus_tag=NM058_06535;pseudo=true CP101611.1 Protein Homology CDS 1266300 1267420 . + 0 ID=cds-NM058_06535;Parent=gene-NM058_06535;Note=frameshifted;gbkey=CDS;gene=rmgQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390890.3;locus_tag=NM058_06535;product=unsaturated rhamnogalacturonyl hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1267417 1267919 . + . ID=gene-NM058_06540;Name=NM058_06540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06540;pseudo=true CP101611.1 Protein Homology CDS 1267417 1267919 . + 0 ID=cds-NM058_06540;Parent=gene-NM058_06540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390889.2;locus_tag=NM058_06540;product=lipoprotein YteS;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1267932 1269217 . + . ID=gene-NM058_06545;Name=NM058_06545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06545;pseudo=true CP101611.1 Protein Homology CDS 1267932 1269217 . + 0 ID=cds-NM058_06545;Parent=gene-NM058_06545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003237958.1;locus_tag=NM058_06545;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1269239 1269907 . + . ID=gene-NM058_06550;Name=NM058_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06550 CP101611.1 Protein Homology CDS 1269239 1269907 . + 0 ID=cds-UTX06232.1;Parent=gene-NM058_06550;Dbxref=NCBI_GP:UTX06232.1;Name=UTX06232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390887.1;locus_tag=NM058_06550;product=YesL family protein;protein_id=UTX06232.1;transl_table=11 CP101611.1 Genbank gene 1269975 1270157 . + . ID=gene-NM058_06555;Name=NM058_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06555 CP101611.1 Protein Homology CDS 1269975 1270157 . + 0 ID=cds-UTX06233.1;Parent=gene-NM058_06555;Dbxref=NCBI_GP:UTX06233.1;Name=UTX06233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390886.1;locus_tag=NM058_06555;product=sporulation protein Cse60;protein_id=UTX06233.1;transl_table=11 CP101611.1 Genbank pseudogene 1270194 1271733 . - . ID=gene-NM058_06560;Name=opuD;gbkey=Gene;gene=opuD;gene_biotype=pseudogene;locus_tag=NM058_06560;pseudo=true CP101611.1 Protein Homology CDS 1270194 1271733 . - 0 ID=cds-NM058_06560;Parent=gene-NM058_06560;Note=frameshifted;gbkey=CDS;gene=opuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390885.1;locus_tag=NM058_06560;product=glycine betaine transporter OpuD;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1271921 1273183 . - . ID=gene-NM058_06565;Name=NM058_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06565 CP101611.1 Protein Homology CDS 1271921 1273183 . - 0 ID=cds-UTX06984.1;Parent=gene-NM058_06565;Dbxref=NCBI_GP:UTX06984.1;Name=UTX06984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390884.2;locus_tag=NM058_06565;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=UTX06984.1;transl_table=11 CP101611.1 Genbank gene 1273389 1275023 . + . ID=gene-NM058_06570;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=NM058_06570 CP101611.1 Protein Homology CDS 1273389 1275023 . + 0 ID=cds-UTX06234.1;Parent=gene-NM058_06570;Dbxref=NCBI_GP:UTX06234.1;Name=UTX06234.1;gbkey=CDS;gene=murJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390883.1;locus_tag=NM058_06570;product=lipid II flippase MurJ;protein_id=UTX06234.1;transl_table=11 CP101611.1 Genbank gene 1275092 1275811 . + . ID=gene-NM058_06575;Name=NM058_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06575 CP101611.1 Protein Homology CDS 1275092 1275811 . + 0 ID=cds-UTX06235.1;Parent=gene-NM058_06575;Dbxref=NCBI_GP:UTX06235.1;Name=UTX06235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390882.2;locus_tag=NM058_06575;product=rRNA pseudouridine synthase;protein_id=UTX06235.1;transl_table=11 CP101611.1 Genbank gene 1275932 1276153 . - . ID=gene-NM058_06580;Name=NM058_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06580 CP101611.1 Protein Homology CDS 1275932 1276153 . - 0 ID=cds-UTX06236.1;Parent=gene-NM058_06580;Dbxref=NCBI_GP:UTX06236.1;Name=UTX06236.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390880.1;locus_tag=NM058_06580;product=DeoR family transcriptional regulator;protein_id=UTX06236.1;transl_table=11 CP101611.1 Genbank pseudogene 1276441 1277149 . + . ID=gene-NM058_06585;Name=NM058_06585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06585;pseudo=true CP101611.1 Protein Homology CDS 1276441 1277149 . + 0 ID=cds-NM058_06585;Parent=gene-NM058_06585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390879.1;locus_tag=NM058_06585;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1277146 1278300 . + . ID=gene-NM058_06590;Name=NM058_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06590 CP101611.1 Protein Homology CDS 1277146 1278300 . + 0 ID=cds-UTX06237.1;Parent=gene-NM058_06590;Dbxref=NCBI_GP:UTX06237.1;Name=UTX06237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390878.1;locus_tag=NM058_06590;product=ABC transporter permease;protein_id=UTX06237.1;transl_table=11 CP101611.1 Genbank pseudogene 1278340 1279637 . - . ID=gene-NM058_06595;Name=pbuO;gbkey=Gene;gene=pbuO;gene_biotype=pseudogene;locus_tag=NM058_06595;pseudo=true CP101611.1 Protein Homology CDS 1278340 1279637 . - 0 ID=cds-NM058_06595;Parent=gene-NM058_06595;Note=frameshifted;gbkey=CDS;gene=pbuO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390877.1;locus_tag=NM058_06595;product=hypoxanthine/guanine permease PbuO;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1279734 1281141 . + . ID=gene-NM058_06600;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=pseudogene;locus_tag=NM058_06600;pseudo=true CP101611.1 Protein Homology CDS 1279734 1281141 . + 0 ID=cds-NM058_06600;Parent=gene-NM058_06600;Note=frameshifted;Ontology_term=GO:0008270,GO:0016805;gbkey=CDS;gene=pepV;go_function=zinc ion binding|0008270||IEA,dipeptidase activity|0016805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004439029.1;locus_tag=NM058_06600;product=dipeptidase PepV;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1281156 1282091 . - . ID=gene-NM058_06605;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=NM058_06605 CP101611.1 Protein Homology CDS 1281156 1282091 . - 0 ID=cds-UTX06238.1;Parent=gene-NM058_06605;Dbxref=NCBI_GP:UTX06238.1;Name=UTX06238.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390875.1;locus_tag=NM058_06605;product=cysteine synthase A;protein_id=UTX06238.1;transl_table=11 CP101611.1 Genbank gene 1282240 1282791 . + . ID=gene-NM058_06610;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=NM058_06610 CP101611.1 Protein Homology CDS 1282240 1282791 . + 0 ID=cds-UTX06239.1;Parent=gene-NM058_06610;Dbxref=NCBI_GP:UTX06239.1;Name=UTX06239.1;Ontology_term=GO:0008033,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'-5'-RNA ligase activity|0008664||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390874.1;locus_tag=NM058_06610;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=UTX06239.1;transl_table=11 CP101611.1 Genbank pseudogene 1282817 1283730 . + . ID=gene-NM058_06615;Name=NM058_06615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06615;pseudo=true CP101611.1 Protein Homology CDS 1282817 1283730 . + 0 ID=cds-NM058_06615;Parent=gene-NM058_06615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390873.1;locus_tag=NM058_06615;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1283779 1284708 . + . ID=gene-NM058_06620;Name=NM058_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06620 CP101611.1 Protein Homology CDS 1283779 1284708 . + 0 ID=cds-UTX06240.1;Parent=gene-NM058_06620;Dbxref=NCBI_GP:UTX06240.1;Name=UTX06240.1;Ontology_term=GO:0008150,GO:0001727,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=lipid kinase activity|0001727||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390872.1;locus_tag=NM058_06620;product=YegS/Rv2252/BmrU family lipid kinase;protein_id=UTX06240.1;transl_table=11 CP101611.1 Genbank pseudogene 1284734 1286886 . + . ID=gene-NM058_06625;Name=pulA;gbkey=Gene;gene=pulA;gene_biotype=pseudogene;locus_tag=NM058_06625;pseudo=true CP101611.1 Protein Homology CDS 1284734 1286886 . + 0 ID=cds-NM058_06625;Parent=gene-NM058_06625;Note=frameshifted;Ontology_term=GO:0051060;gbkey=CDS;gene=pulA;go_function=pullulanase activity|0051060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390871.2;locus_tag=NM058_06625;product=type I pullulanase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1287066 1287860 . + . ID=gene-NM058_06630;Name=NM058_06630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06630;pseudo=true CP101611.1 Protein Homology CDS 1287066 1287860 . + 0 ID=cds-NM058_06630;Parent=gene-NM058_06630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003152355.1;locus_tag=NM058_06630;product=phosphotransferase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1287861 1288139 . - . ID=gene-NM058_06635;Name=NM058_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06635 CP101611.1 Protein Homology CDS 1287861 1288139 . - 0 ID=cds-UTX06241.1;Parent=gene-NM058_06635;Dbxref=NCBI_GP:UTX06241.1;Name=UTX06241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390869.1;locus_tag=NM058_06635;product=YtzH-like family protein;protein_id=UTX06241.1;transl_table=11 CP101611.1 Genbank gene 1288342 1288983 . + . ID=gene-NM058_06640;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=NM058_06640 CP101611.1 Protein Homology CDS 1288342 1288983 . + 0 ID=cds-UTX06242.1;Parent=gene-NM058_06640;Dbxref=NCBI_GP:UTX06242.1;Name=UTX06242.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390868.1;locus_tag=NM058_06640;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=UTX06242.1;transl_table=11 CP101611.1 Genbank gene 1289051 1289896 . + . ID=gene-NM058_06645;Name=NM058_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06645 CP101611.1 Protein Homology CDS 1289051 1289896 . + 0 ID=cds-UTX06243.1;Parent=gene-NM058_06645;Dbxref=NCBI_GP:UTX06243.1;Name=UTX06243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014114807.1;locus_tag=NM058_06645;product=MBL fold metallo-hydrolase;protein_id=UTX06243.1;transl_table=11 CP101611.1 Genbank pseudogene 1289979 1291678 . + . ID=gene-NM058_06650;Name=NM058_06650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06650;pseudo=true CP101611.1 Protein Homology CDS 1289979 1291678 . + 0 ID=cds-NM058_06650;Parent=gene-NM058_06650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390866.1;locus_tag=NM058_06650;product=NAD-dependent malic enzyme;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1291729 1292046 . - . ID=gene-NM058_06655;Name=NM058_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06655 CP101611.1 Protein Homology CDS 1291729 1292046 . - 0 ID=cds-UTX06244.1;Parent=gene-NM058_06655;Dbxref=NCBI_GP:UTX06244.1;Name=UTX06244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390865.1;locus_tag=NM058_06655;product=PepSY domain-containing protein;protein_id=UTX06244.1;transl_table=11 CP101611.1 Genbank pseudogene 1292205 1293276 . + . ID=gene-NM058_06660;Name=NM058_06660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06660;pseudo=true CP101611.1 Protein Homology CDS 1292205 1293276 . + 0 ID=cds-NM058_06660;Parent=gene-NM058_06660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390864.1;locus_tag=NM058_06660;product=M42 family metallopeptidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1293333 1293779 . - . ID=gene-NM058_06665;Name=NM058_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06665 CP101611.1 Protein Homology CDS 1293333 1293779 . - 0 ID=cds-UTX06245.1;Parent=gene-NM058_06665;Dbxref=NCBI_GP:UTX06245.1;Name=UTX06245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390863.1;locus_tag=NM058_06665;product=YtoQ family protein;protein_id=UTX06245.1;transl_table=11 CP101611.1 Genbank gene 1293857 1293973 . + . ID=gene-NM058_06670;Name=NM058_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06670 CP101611.1 Protein Homology CDS 1293857 1293973 . + 0 ID=cds-UTX06246.1;Parent=gene-NM058_06670;Dbxref=NCBI_GP:UTX06246.1;Name=UTX06246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513998.1;locus_tag=NM058_06670;product=hypothetical protein;protein_id=UTX06246.1;transl_table=11 CP101611.1 Genbank gene 1294014 1294337 . + . ID=gene-NM058_06675;Name=NM058_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06675 CP101611.1 Protein Homology CDS 1294014 1294337 . + 0 ID=cds-UTX06247.1;Parent=gene-NM058_06675;Dbxref=NCBI_GP:UTX06247.1;Name=UTX06247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390862.1;locus_tag=NM058_06675;product=thioredoxin family protein;protein_id=UTX06247.1;transl_table=11 CP101611.1 Genbank gene 1294353 1295162 . + . ID=gene-NM058_06680;Name=NM058_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06680 CP101611.1 Protein Homology CDS 1294353 1295162 . + 0 ID=cds-UTX06248.1;Parent=gene-NM058_06680;Dbxref=NCBI_GP:UTX06248.1;Name=UTX06248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390861.1;locus_tag=NM058_06680;product=DUF1444 domain-containing protein;protein_id=UTX06248.1;transl_table=11 CP101611.1 Genbank gene 1295178 1295783 . + . ID=gene-NM058_06685;Name=NM058_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06685 CP101611.1 Protein Homology CDS 1295178 1295783 . + 0 ID=cds-UTX06249.1;Parent=gene-NM058_06685;Dbxref=NCBI_GP:UTX06249.1;Name=UTX06249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390860.1;locus_tag=NM058_06685;product=DUF4479 domain-containing protein;protein_id=UTX06249.1;transl_table=11 CP101611.1 Genbank pseudogene 1295943 1298794 . + . ID=gene-NM058_06690;Name=NM058_06690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06690;pseudo=true CP101611.1 Protein Homology CDS 1295943 1298794 . + 0 ID=cds-NM058_06690;Parent=gene-NM058_06690;Note=frameshifted;Ontology_term=GO:0000166,GO:0003677,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390859.2;locus_tag=NM058_06690;product=FtsK/SpoIIIE domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1299045 1300343 . + . ID=gene-NM058_06695;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=NM058_06695 CP101611.1 Protein Homology CDS 1299045 1300343 . + 0 ID=cds-UTX06250.1;Parent=gene-NM058_06695;Dbxref=NCBI_GP:UTX06250.1;Name=UTX06250.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390857.1;locus_tag=NM058_06695;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=UTX06250.1;transl_table=11 CP101611.1 Genbank gene 1300506 1300928 . + . ID=gene-NM058_06700;Name=NM058_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06700 CP101611.1 Protein Homology CDS 1300506 1300928 . + 0 ID=cds-UTX06251.1;Parent=gene-NM058_06700;Dbxref=NCBI_GP:UTX06251.1;Name=UTX06251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390856.2;locus_tag=NM058_06700;product=DUF948 domain-containing protein;protein_id=UTX06251.1;transl_table=11 CP101611.1 Genbank gene 1300959 1301414 . + . ID=gene-NM058_06705;Name=NM058_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06705 CP101611.1 Protein Homology CDS 1300959 1301414 . + 0 ID=cds-UTX06985.1;Parent=gene-NM058_06705;Dbxref=NCBI_GP:UTX06985.1;Name=UTX06985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390855.2;locus_tag=NM058_06705;product=YtxH domain-containing protein;protein_id=UTX06985.1;transl_table=11 CP101611.1 Genbank gene 1301438 1301764 . + . ID=gene-NM058_06710;Name=ytxJ;gbkey=Gene;gene=ytxJ;gene_biotype=protein_coding;locus_tag=NM058_06710 CP101611.1 Protein Homology CDS 1301438 1301764 . + 0 ID=cds-UTX06252.1;Parent=gene-NM058_06710;Dbxref=NCBI_GP:UTX06252.1;Name=UTX06252.1;Ontology_term=GO:0006790;gbkey=CDS;gene=ytxJ;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390854.1;locus_tag=NM058_06710;product=bacillithiol system redox-active protein YtxJ;protein_id=UTX06252.1;transl_table=11 CP101611.1 Genbank pseudogene 1301999 1303074 . + . ID=gene-NM058_06715;Name=NM058_06715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06715;pseudo=true CP101611.1 Protein Homology CDS 1301999 1303074 . + 0 ID=cds-NM058_06715;Parent=gene-NM058_06715;Note=frameshifted;Ontology_term=GO:0009073,GO:0046417,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390853.1;locus_tag=NM058_06715;product=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1303350 1304353 . + . ID=gene-NM058_06720;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=pseudogene;locus_tag=NM058_06720;pseudo=true CP101611.1 Protein Homology CDS 1303350 1304353 . + 0 ID=cds-NM058_06720;Parent=gene-NM058_06720;Note=frameshifted;Ontology_term=GO:0005975,GO:0006355,GO:0001228,GO:0003677;gbkey=CDS;gene=ccpA;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA,DNA binding|0003677||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390852.1;locus_tag=NM058_06720;product=catabolite control protein A;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1304417 1305234 . + . ID=gene-NM058_06725;Name=motP;gbkey=Gene;gene=motP;gene_biotype=pseudogene;locus_tag=NM058_06725;pseudo=true CP101611.1 Protein Homology CDS 1304417 1305234 . + 0 ID=cds-NM058_06725;Parent=gene-NM058_06725;Note=frameshifted;gbkey=CDS;gene=motP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390851.1;locus_tag=NM058_06725;product=flagellar motor protein MotP;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1305224 1305946 . + . ID=gene-NM058_06730;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=NM058_06730 CP101611.1 Protein Homology CDS 1305224 1305946 . + 0 ID=cds-UTX06253.1;Parent=gene-NM058_06730;Dbxref=NCBI_GP:UTX06253.1;Name=UTX06253.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390850.1;locus_tag=NM058_06730;product=flagellar motor protein MotB;protein_id=UTX06253.1;transl_table=11 CP101611.1 Genbank gene 1305958 1307121 . - . ID=gene-NM058_06735;Name=NM058_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06735 CP101611.1 Protein Homology CDS 1305958 1307121 . - 0 ID=cds-UTX06254.1;Parent=gene-NM058_06735;Dbxref=NCBI_GP:UTX06254.1;Name=UTX06254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390849.1;locus_tag=NM058_06735;product=acetoin utilization protein AcuC;protein_id=UTX06254.1;transl_table=11 CP101611.1 Genbank gene 1307118 1307762 . - . ID=gene-NM058_06740;Name=NM058_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06740 CP101611.1 Protein Homology CDS 1307118 1307762 . - 0 ID=cds-UTX06255.1;Parent=gene-NM058_06740;Dbxref=NCBI_GP:UTX06255.1;Name=UTX06255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390848.1;locus_tag=NM058_06740;product=acetoin utilization AcuB family protein;protein_id=UTX06255.1;transl_table=11 CP101611.1 Genbank gene 1307789 1308421 . - . ID=gene-NM058_06745;Name=acuA;gbkey=Gene;gene=acuA;gene_biotype=protein_coding;locus_tag=NM058_06745 CP101611.1 Protein Homology CDS 1307789 1308421 . - 0 ID=cds-UTX06256.1;Parent=gene-NM058_06745;Dbxref=NCBI_GP:UTX06256.1;Name=UTX06256.1;gbkey=CDS;gene=acuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390847.1;locus_tag=NM058_06745;product=acetoin utilization protein acetyltransferase AcuA;protein_id=UTX06256.1;transl_table=11 CP101611.1 Genbank gene 1308581 1310299 . + . ID=gene-NM058_06750;Name=acsA;gbkey=Gene;gene=acsA;gene_biotype=protein_coding;locus_tag=NM058_06750 CP101611.1 Protein Homology CDS 1308581 1310299 . + 0 ID=cds-UTX06257.1;Parent=gene-NM058_06750;Dbxref=NCBI_GP:UTX06257.1;Name=UTX06257.1;gbkey=CDS;gene=acsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390846.1;locus_tag=NM058_06750;product=acetate--CoA ligase;protein_id=UTX06257.1;transl_table=11 CP101611.1 cmsearch binding_site 1310354 1310591 . + . ID=id-CP101611.1:1310354..1310591;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 CP101611.1 Genbank gene 1310642 1311910 . + . ID=gene-NM058_06755;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=NM058_06755 CP101611.1 Protein Homology CDS 1310642 1311910 . + 0 ID=cds-UTX06258.1;Parent=gene-NM058_06755;Dbxref=NCBI_GP:UTX06258.1;Name=UTX06258.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390845.1;locus_tag=NM058_06755;product=tyrosine--tRNA ligase;protein_id=UTX06258.1;transl_table=11 CP101611.1 Genbank gene 1312190 1312792 . - . ID=gene-NM058_06760;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=NM058_06760 CP101611.1 Protein Homology CDS 1312190 1312792 . - 0 ID=cds-UTX06259.1;Parent=gene-NM058_06760;Dbxref=NCBI_GP:UTX06259.1;Name=UTX06259.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390844.1;locus_tag=NM058_06760;product=30S ribosomal protein S4;protein_id=UTX06259.1;transl_table=11 CP101611.1 Genbank gene 1313087 1314826 . + . ID=gene-NM058_06765;Name=NM058_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06765 CP101611.1 Protein Homology CDS 1313087 1314826 . + 0 ID=cds-UTX06260.1;Parent=gene-NM058_06765;Dbxref=NCBI_GP:UTX06260.1;Name=UTX06260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390843.1;locus_tag=NM058_06765;product=diguanylate cyclase;protein_id=UTX06260.1;transl_table=11 CP101611.1 Genbank gene 1314864 1315355 . - . ID=gene-NM058_06770;Name=NM058_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06770 CP101611.1 Protein Homology CDS 1314864 1315355 . - 0 ID=cds-UTX06261.1;Parent=gene-NM058_06770;Dbxref=NCBI_GP:UTX06261.1;Name=UTX06261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390842.2;locus_tag=NM058_06770;product=GAF domain-containing protein;protein_id=UTX06261.1;transl_table=11 CP101611.1 Genbank gene 1315482 1316105 . + . ID=gene-NM058_06775;Name=refZ;gbkey=Gene;gene=refZ;gene_biotype=protein_coding;locus_tag=NM058_06775 CP101611.1 Protein Homology CDS 1315482 1316105 . + 0 ID=cds-UTX06262.1;Parent=gene-NM058_06775;Dbxref=NCBI_GP:UTX06262.1;Name=UTX06262.1;gbkey=CDS;gene=refZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390841.1;locus_tag=NM058_06775;product=transcriptional regulator RefZ;protein_id=UTX06262.1;transl_table=11 CP101611.1 Genbank gene 1316102 1316908 . - . ID=gene-NM058_06780;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=NM058_06780 CP101611.1 Protein Homology CDS 1316102 1316908 . - 0 ID=cds-UTX06263.1;Parent=gene-NM058_06780;Dbxref=NCBI_GP:UTX06263.1;Name=UTX06263.1;Ontology_term=GO:0000105,GO:0004401;gbkey=CDS;gene=hisJ;go_function=histidinol-phosphatase activity|0004401||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390840.1;locus_tag=NM058_06780;product=histidinol-phosphatase HisJ;protein_id=UTX06263.1;transl_table=11 CP101611.1 Genbank gene 1317105 1318793 . + . ID=gene-NM058_06785;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=NM058_06785 CP101611.1 Protein Homology CDS 1317105 1318793 . + 0 ID=cds-UTX06264.1;Parent=gene-NM058_06785;Dbxref=NCBI_GP:UTX06264.1;Name=UTX06264.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390839.1;locus_tag=NM058_06785;product=septation ring formation regulator EzrA;protein_id=UTX06264.1;transl_table=11 CP101611.1 Genbank gene 1318887 1320224 . - . ID=gene-NM058_06790;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=NM058_06790 CP101611.1 Protein Homology CDS 1318887 1320224 . - 0 ID=cds-UTX06265.1;Parent=gene-NM058_06790;Dbxref=NCBI_GP:UTX06265.1;Name=UTX06265.1;Ontology_term=GO:0015803,GO:0015658;gbkey=CDS;gene=brnQ;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390838.1;locus_tag=NM058_06790;product=branched-chain amino acid transport system II carrier protein;protein_id=UTX06265.1;transl_table=11 CP101611.1 Genbank pseudogene 1320418 1321562 . + . ID=gene-NM058_06795;Name=NM058_06795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06795;pseudo=true CP101611.1 Protein Homology CDS 1320418 1321562 . + 0 ID=cds-NM058_06795;Parent=gene-NM058_06795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390837.1;locus_tag=NM058_06795;product=cysteine desulfurase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1321566 1322771 . + . ID=gene-NM058_06800;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=NM058_06800 CP101611.1 Protein Homology CDS 1321566 1322771 . + 0 ID=cds-UTX06266.1;Parent=gene-NM058_06800;Dbxref=NCBI_GP:UTX06266.1;Name=UTX06266.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390836.2;locus_tag=NM058_06800;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=UTX06266.1;transl_table=11 CP101611.1 Genbank gene 1322863 1323072 . + . ID=gene-NM058_06805;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=NM058_06805 CP101611.1 Protein Homology CDS 1322863 1323072 . + 0 ID=cds-UTX06267.1;Parent=gene-NM058_06805;Dbxref=NCBI_GP:UTX06267.1;Name=UTX06267.1;Ontology_term=GO:0003690;gbkey=CDS;gene=sspA;go_function=double-stranded DNA binding|0003690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390835.1;locus_tag=NM058_06805;product=alpha type acid-soluble spore protein SspA;protein_id=UTX06267.1;transl_table=11 CP101611.1 Genbank gene 1323250 1324839 . + . ID=gene-NM058_06810;Name=NM058_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06810 CP101611.1 Protein Homology CDS 1323250 1324839 . + 0 ID=cds-UTX06268.1;Parent=gene-NM058_06810;Dbxref=NCBI_GP:UTX06268.1;Name=UTX06268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390834.2;locus_tag=NM058_06810;product=acyl--CoA ligase;protein_id=UTX06268.1;transl_table=11 CP101611.1 Genbank pseudogene 1324860 1326445 . + . ID=gene-NM058_06815;Name=NM058_06815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06815;pseudo=true CP101611.1 Protein Homology CDS 1324860 1326445 . + 0 ID=cds-NM058_06815;Parent=gene-NM058_06815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014114776.1;locus_tag=NM058_06815;product=amidohydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1326479 1327281 . - . ID=gene-NM058_06820;Name=NM058_06820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06820;pseudo=true CP101611.1 Protein Homology CDS 1326479 1327281 . - 0 ID=cds-NM058_06820;Parent=gene-NM058_06820;Note=frameshifted;Ontology_term=GO:0019674,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NAD metabolic process|0019674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390832.1;locus_tag=NM058_06820;product=NAD kinase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1327467 1328474 . + . ID=gene-NM058_06825;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=NM058_06825 CP101611.1 Protein Homology CDS 1327467 1328474 . + 0 ID=cds-UTX06269.1;Parent=gene-NM058_06825;Dbxref=NCBI_GP:UTX06269.1;Name=UTX06269.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=sppA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390831.1;locus_tag=NM058_06825;product=signal peptide peptidase SppA;protein_id=UTX06269.1;transl_table=11 CP101611.1 Genbank gene 1328487 1328981 . + . ID=gene-NM058_06830;Name=NM058_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06830 CP101611.1 Protein Homology CDS 1328487 1328981 . + 0 ID=cds-UTX06270.1;Parent=gene-NM058_06830;Dbxref=NCBI_GP:UTX06270.1;Name=UTX06270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390830.1;locus_tag=NM058_06830;product=RDD family protein;protein_id=UTX06270.1;transl_table=11 CP101611.1 Genbank pseudogene 1329056 1329732 . + . ID=gene-NM058_06835;Name=NM058_06835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06835;pseudo=true CP101611.1 Protein Homology CDS 1329056 1329732 . + 0 ID=cds-NM058_06835;Parent=gene-NM058_06835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390829.1;locus_tag=NM058_06835;product=DUF2953 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1329746 1330200 . + . ID=gene-NM058_06840;Name=ytfJ;gbkey=Gene;gene=ytfJ;gene_biotype=pseudogene;locus_tag=NM058_06840;pseudo=true CP101611.1 Protein Homology CDS 1329746 1330200 . + 0 ID=cds-NM058_06840;Parent=gene-NM058_06840;Note=frameshifted;Ontology_term=GO:0030436,GO:0003674,GO:0005575;gbkey=CDS;gene=ytfJ;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390828.1;locus_tag=NM058_06840;product=GerW family sporulation protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1330309 1330812 . + . ID=gene-NM058_06845;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=NM058_06845 CP101611.1 Protein Homology CDS 1330309 1330812 . + 0 ID=cds-UTX06271.1;Parent=gene-NM058_06845;Dbxref=NCBI_GP:UTX06271.1;Name=UTX06271.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390827.1;locus_tag=NM058_06845;product=thiol peroxidase;protein_id=UTX06271.1;transl_table=11 CP101611.1 Genbank gene 1330871 1331857 . + . ID=gene-NM058_06850;Name=NM058_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06850 CP101611.1 Protein Homology CDS 1330871 1331857 . + 0 ID=cds-UTX06272.1;Parent=gene-NM058_06850;Dbxref=NCBI_GP:UTX06272.1;Name=UTX06272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390826.1;locus_tag=NM058_06850;product=class I SAM-dependent methyltransferase;protein_id=UTX06272.1;transl_table=11 CP101611.1 Genbank gene 1332203 1333390 . + . ID=gene-NM058_06855;Name=NM058_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06855 CP101611.1 Protein Homology CDS 1332203 1333390 . + 0 ID=cds-UTX06273.1;Parent=gene-NM058_06855;Dbxref=NCBI_GP:UTX06273.1;Name=UTX06273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390825.1;locus_tag=NM058_06855;product=acetate kinase;protein_id=UTX06273.1;transl_table=11 CP101611.1 Genbank pseudogene 1333476 1333987 . + . ID=gene-NM058_06860;Name=NM058_06860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06860;pseudo=true CP101611.1 Protein Homology CDS 1333476 1333987 . + 0 ID=cds-NM058_06860;Parent=gene-NM058_06860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390824.1;locus_tag=NM058_06860;product=molybdenum cofactor biosynthesis protein MoaB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1334156 1335367 . + . ID=gene-NM058_06865;Name=NM058_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06865 CP101611.1 Protein Homology CDS 1334156 1335367 . + 0 ID=cds-UTX06274.1;Parent=gene-NM058_06865;Dbxref=NCBI_GP:UTX06274.1;Name=UTX06274.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390823.1;locus_tag=NM058_06865;product=argininosuccinate synthase;protein_id=UTX06274.1;transl_table=11 CP101611.1 Genbank gene 1335364 1336749 . + . ID=gene-NM058_06870;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=NM058_06870 CP101611.1 Protein Homology CDS 1335364 1336749 . + 0 ID=cds-UTX06275.1;Parent=gene-NM058_06870;Dbxref=NCBI_GP:UTX06275.1;Name=UTX06275.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390822.1;locus_tag=NM058_06870;product=argininosuccinate lyase;protein_id=UTX06275.1;transl_table=11 CP101611.1 Genbank gene 1337068 1337835 . + . ID=gene-NM058_06875;Name=NM058_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06875 CP101611.1 Protein Homology CDS 1337068 1337835 . + 0 ID=cds-UTX06276.1;Parent=gene-NM058_06875;Dbxref=NCBI_GP:UTX06276.1;Name=UTX06276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390820.1;locus_tag=NM058_06875;product=SDR family oxidoreductase;protein_id=UTX06276.1;transl_table=11 CP101611.1 Genbank gene 1337897 1338580 . + . ID=gene-NM058_06880;Name=NM058_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06880 CP101611.1 Protein Homology CDS 1337897 1338580 . + 0 ID=cds-UTX06277.1;Parent=gene-NM058_06880;Dbxref=NCBI_GP:UTX06277.1;Name=UTX06277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390819.2;locus_tag=NM058_06880;product=metal-dependent hydrolase;protein_id=UTX06277.1;transl_table=11 CP101611.1 Genbank pseudogene 1338648 1339573 . - . ID=gene-NM058_06885;Name=NM058_06885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06885;pseudo=true CP101611.1 Protein Homology CDS 1338648 1339573 . - 0 ID=cds-NM058_06885;Parent=gene-NM058_06885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390818.1;locus_tag=NM058_06885;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1339726 1340262 . + . ID=gene-NM058_06890;Name=snaA;gbkey=Gene;gene=snaA;gene_biotype=protein_coding;locus_tag=NM058_06890 CP101611.1 Protein Homology CDS 1339726 1340262 . + 0 ID=cds-UTX06278.1;Parent=gene-NM058_06890;Dbxref=NCBI_GP:UTX06278.1;Name=UTX06278.1;gbkey=CDS;gene=snaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390817.1;locus_tag=NM058_06890;product=N-acetyltransferase SnaA;protein_id=UTX06278.1;transl_table=11 CP101611.1 Genbank gene 1340276 1341085 . + . ID=gene-NM058_06895;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=NM058_06895 CP101611.1 Protein Homology CDS 1340276 1341085 . + 0 ID=cds-UTX06279.1;Parent=gene-NM058_06895;Dbxref=NCBI_GP:UTX06279.1;Name=UTX06279.1;gbkey=CDS;gene=tcyJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390816.1;locus_tag=NM058_06895;product=sulfur-containing amino acid ABC transporter substrate-binding protein TcyJ;protein_id=UTX06279.1;transl_table=11 CP101611.1 Genbank gene 1341099 1341911 . + . ID=gene-NM058_06900;Name=NM058_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06900 CP101611.1 Protein Homology CDS 1341099 1341911 . + 0 ID=cds-UTX06280.1;Parent=gene-NM058_06900;Dbxref=NCBI_GP:UTX06280.1;Name=UTX06280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390815.1;locus_tag=NM058_06900;product=amino acid ABC transporter substrate-binding protein;protein_id=UTX06280.1;transl_table=11 CP101611.1 Genbank gene 1341933 1342652 . + . ID=gene-NM058_06905;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=NM058_06905 CP101611.1 Protein Homology CDS 1341933 1342652 . + 0 ID=cds-UTX06281.1;Parent=gene-NM058_06905;Dbxref=NCBI_GP:UTX06281.1;Name=UTX06281.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390814.1;locus_tag=NM058_06905;product=sulfur-containing amino acid ABC transporter permease TcyL;protein_id=UTX06281.1;transl_table=11 CP101611.1 Genbank gene 1342682 1343389 . + . ID=gene-NM058_06910;Name=NM058_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06910 CP101611.1 Protein Homology CDS 1342682 1343389 . + 0 ID=cds-UTX06282.1;Parent=gene-NM058_06910;Dbxref=NCBI_GP:UTX06282.1;Name=UTX06282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390813.1;locus_tag=NM058_06910;product=amino acid ABC transporter permease;protein_id=UTX06282.1;transl_table=11 CP101611.1 Genbank gene 1343386 1344165 . + . ID=gene-NM058_06915;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=NM058_06915 CP101611.1 Protein Homology CDS 1343386 1344165 . + 0 ID=cds-UTX06283.1;Parent=gene-NM058_06915;Dbxref=NCBI_GP:UTX06283.1;Name=UTX06283.1;gbkey=CDS;gene=tcyN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390812.1;locus_tag=NM058_06915;product=sulfur-containing amino-acid ABC transporter ATP-binding protein TcyN;protein_id=UTX06283.1;transl_table=11 CP101611.1 Genbank gene 1344162 1345166 . + . ID=gene-NM058_06920;Name=NM058_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06920 CP101611.1 Protein Homology CDS 1344162 1345166 . + 0 ID=cds-UTX06284.1;Parent=gene-NM058_06920;Dbxref=NCBI_GP:UTX06284.1;Name=UTX06284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390811.1;locus_tag=NM058_06920;product=LLM class flavin-dependent oxidoreductase;protein_id=UTX06284.1;transl_table=11 CP101611.1 Genbank pseudogene 1345180 1345459 . + . ID=gene-NM058_06925;Name=NM058_06925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06925;pseudo=true CP101611.1 Protein Homology CDS 1345180 1345459 . + 0 ID=cds-NM058_06925;Parent=gene-NM058_06925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390810.1;locus_tag=NM058_06925;product=glutaredoxin family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1345456 1346781 . + . ID=gene-NM058_06930;Name=NM058_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06930 CP101611.1 Protein Homology CDS 1345456 1346781 . + 0 ID=cds-UTX06285.1;Parent=gene-NM058_06930;Dbxref=NCBI_GP:UTX06285.1;Name=UTX06285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003237818.1;locus_tag=NM058_06930;product=LLM class flavin-dependent oxidoreductase;protein_id=UTX06285.1;transl_table=11 CP101611.1 Genbank gene 1346828 1347520 . + . ID=gene-NM058_06935;Name=NM058_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06935 CP101611.1 Protein Homology CDS 1346828 1347520 . + 0 ID=cds-UTX06286.1;Parent=gene-NM058_06935;Dbxref=NCBI_GP:UTX06286.1;Name=UTX06286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390808.1;locus_tag=NM058_06935;product=riboflavin kinase;protein_id=UTX06286.1;transl_table=11 CP101611.1 Genbank pseudogene 1347538 1348802 . + . ID=gene-NM058_06940;Name=NM058_06940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_06940;pseudo=true CP101611.1 Protein Homology CDS 1347538 1348802 . + 0 ID=cds-NM058_06940;Parent=gene-NM058_06940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390807.1;locus_tag=NM058_06940;product=M20 peptidase aminoacylase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1348821 1349723 . + . ID=gene-NM058_06945;Name=NM058_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06945 CP101611.1 Protein Homology CDS 1348821 1349723 . + 0 ID=cds-UTX06287.1;Parent=gene-NM058_06945;Dbxref=NCBI_GP:UTX06287.1;Name=UTX06287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013057718.1;locus_tag=NM058_06945;product=sulfite exporter TauE/SafE family protein;protein_id=UTX06287.1;transl_table=11 CP101611.1 Genbank gene 1349898 1351217 . + . ID=gene-NM058_06950;Name=NM058_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06950 CP101611.1 Protein Homology CDS 1349898 1351217 . + 0 ID=cds-UTX06288.1;Parent=gene-NM058_06950;Dbxref=NCBI_GP:UTX06288.1;Name=UTX06288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390805.1;locus_tag=NM058_06950;product=CBS domain-containing protein;protein_id=UTX06288.1;transl_table=11 CP101611.1 Genbank gene 1351236 1351538 . - . ID=gene-NM058_06955;Name=NM058_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06955 CP101611.1 Protein Homology CDS 1351236 1351538 . - 0 ID=cds-UTX06289.1;Parent=gene-NM058_06955;Dbxref=NCBI_GP:UTX06289.1;Name=UTX06289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390804.1;locus_tag=NM058_06955;product=YtpI family protein;protein_id=UTX06289.1;transl_table=11 CP101611.1 Genbank gene 1351669 1352610 . + . ID=gene-NM058_06960;Name=nrnA;gbkey=Gene;gene=nrnA;gene_biotype=protein_coding;locus_tag=NM058_06960 CP101611.1 Protein Homology CDS 1351669 1352610 . + 0 ID=cds-UTX06290.1;Parent=gene-NM058_06960;Dbxref=NCBI_GP:UTX06290.1;Name=UTX06290.1;gbkey=CDS;gene=nrnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390803.1;locus_tag=NM058_06960;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=UTX06290.1;transl_table=11 CP101611.1 Genbank gene 1352627 1352818 . - . ID=gene-NM058_06965;Name=NM058_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_06965 CP101611.1 Protein Homology CDS 1352627 1352818 . - 0 ID=cds-UTX06291.1;Parent=gene-NM058_06965;Dbxref=NCBI_GP:UTX06291.1;Name=UTX06291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097772.1;locus_tag=NM058_06965;product=hypothetical protein;protein_id=UTX06291.1;transl_table=11 CP101611.1 Genbank pseudogene 1352922 1353424 . - . ID=gene-NM058_06970;Name=ytrI;gbkey=Gene;gene=ytrI;gene_biotype=pseudogene;locus_tag=NM058_06970;pseudo=true CP101611.1 Protein Homology CDS 1352922 1353424 . - 0 ID=cds-NM058_06970;Parent=gene-NM058_06970;Note=frameshifted;gbkey=CDS;gene=ytrI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010329677.1;locus_tag=NM058_06970;product=sporulation membrane protein YtrI;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1353421 1353762 . - . ID=gene-NM058_06975;Name=ytrH;gbkey=Gene;gene=ytrH;gene_biotype=protein_coding;locus_tag=NM058_06975 CP101611.1 Protein Homology CDS 1353421 1353762 . - 0 ID=cds-UTX06292.1;Parent=gene-NM058_06975;Dbxref=NCBI_GP:UTX06292.1;Name=UTX06292.1;gbkey=CDS;gene=ytrH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097771.1;locus_tag=NM058_06975;product=sporulation membrane protein YtrH;protein_id=UTX06292.1;transl_table=11 CP101611.1 Genbank gene 1353902 1357249 . + . ID=gene-NM058_06980;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=NM058_06980 CP101611.1 Protein Homology CDS 1353902 1357249 . + 0 ID=cds-UTX06293.1;Parent=gene-NM058_06980;Dbxref=NCBI_GP:UTX06293.1;Name=UTX06293.1;gbkey=CDS;gene=dnaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390801.1;locus_tag=NM058_06980;product=DNA polymerase III subunit alpha;protein_id=UTX06293.1;transl_table=11 CP101611.1 Genbank gene 1357384 1358616 . + . ID=gene-NM058_06985;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=NM058_06985 CP101611.1 Protein Homology CDS 1357384 1358616 . + 0 ID=cds-UTX06294.1;Parent=gene-NM058_06985;Dbxref=NCBI_GP:UTX06294.1;Name=UTX06294.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390800.1;locus_tag=NM058_06985;product=NADP-dependent malic enzyme;protein_id=UTX06294.1;transl_table=11 CP101611.1 Genbank gene 1358950 1359822 . + . ID=gene-NM058_06990;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=NM058_06990 CP101611.1 Protein Homology CDS 1358950 1359822 . + 0 ID=cds-UTX06295.1;Parent=gene-NM058_06990;Dbxref=NCBI_GP:UTX06295.1;Name=UTX06295.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390799.2;locus_tag=NM058_06990;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=UTX06295.1;transl_table=11 CP101611.1 Genbank pseudogene 1359807 1360782 . + . ID=gene-NM058_06995;Name=accA;gbkey=Gene;gene=accA;gene_biotype=pseudogene;locus_tag=NM058_06995;pseudo=true CP101611.1 Protein Homology CDS 1359807 1360782 . + 0 ID=cds-NM058_06995;Parent=gene-NM058_06995;Note=frameshifted;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390798.1;locus_tag=NM058_06995;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1360966 1361925 . + . ID=gene-NM058_07000;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=NM058_07000 CP101611.1 Protein Homology CDS 1360966 1361925 . + 0 ID=cds-UTX06296.1;Parent=gene-NM058_07000;Dbxref=NCBI_GP:UTX06296.1;Name=UTX06296.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390797.1;locus_tag=NM058_07000;product=6-phosphofructokinase;protein_id=UTX06296.1;transl_table=11 CP101611.1 Genbank gene 1361968 1363725 . + . ID=gene-NM058_07005;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=NM058_07005 CP101611.1 Protein Homology CDS 1361968 1363725 . + 0 ID=cds-UTX06297.1;Parent=gene-NM058_07005;Dbxref=NCBI_GP:UTX06297.1;Name=UTX06297.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390796.1;locus_tag=NM058_07005;product=pyruvate kinase;protein_id=UTX06297.1;transl_table=11 CP101611.1 Genbank gene 1363809 1364189 . + . ID=gene-NM058_07010;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=NM058_07010 CP101611.1 Protein Homology CDS 1363809 1364189 . + 0 ID=cds-UTX06298.1;Parent=gene-NM058_07010;Dbxref=NCBI_GP:UTX06298.1;Name=UTX06298.1;gbkey=CDS;gene=fxsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390795.1;locus_tag=NM058_07010;product=membrane protein FxsA;protein_id=UTX06298.1;transl_table=11 CP101611.1 Genbank gene 1364221 1364505 . - . ID=gene-NM058_07015;Name=NM058_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07015 CP101611.1 Protein Homology CDS 1364221 1364505 . - 0 ID=cds-UTX06299.1;Parent=gene-NM058_07015;Dbxref=NCBI_GP:UTX06299.1;Name=UTX06299.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013740.2;locus_tag=NM058_07015;product=AI-2E family transporter;protein_id=UTX06299.1;transl_table=11 CP101611.1 Genbank gene 1364415 1365101 . - . ID=gene-NM058_07020;Name=ytvI;gbkey=Gene;gene=ytvI;gene_biotype=protein_coding;locus_tag=NM058_07020 CP101611.1 Protein Homology CDS 1364415 1365101 . - 0 ID=cds-UTX06300.1;Parent=gene-NM058_07020;Dbxref=NCBI_GP:UTX06300.1;Name=UTX06300.1;Ontology_term=GO:0030436,GO:0003674,GO:0016021;gbkey=CDS;gene=ytvI;go_component=integral component of membrane|0016021||IEA;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: protein motif:HMM:TIGR02872.1;locus_tag=NM058_07020;product=sporulation integral membrane protein YtvI;protein_id=UTX06300.1;transl_table=11 CP101611.1 Genbank gene 1365083 1365334 . - . ID=gene-NM058_07025;Name=NM058_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07025 CP101611.1 Protein Homology CDS 1365083 1365334 . - 0 ID=cds-UTX06301.1;Parent=gene-NM058_07025;Dbxref=NCBI_GP:UTX06301.1;Name=UTX06301.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013740.2;locus_tag=NM058_07025;product=AI-2E family transporter;protein_id=UTX06301.1;transl_table=11 CP101611.1 Genbank gene 1365431 1365895 . + . ID=gene-NM058_07030;Name=NM058_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07030 CP101611.1 Protein Homology CDS 1365431 1365895 . + 0 ID=cds-UTX06302.1;Parent=gene-NM058_07030;Dbxref=NCBI_GP:UTX06302.1;Name=UTX06302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390793.1;locus_tag=NM058_07030;product=DUF441 domain-containing protein;protein_id=UTX06302.1;transl_table=11 CP101611.1 Genbank gene 1366229 1367347 . + . ID=gene-NM058_07035;Name=citZ;gbkey=Gene;gene=citZ;gene_biotype=protein_coding;locus_tag=NM058_07035 CP101611.1 Protein Homology CDS 1366229 1367347 . + 0 ID=cds-UTX06303.1;Parent=gene-NM058_07035;Dbxref=NCBI_GP:UTX06303.1;Name=UTX06303.1;Ontology_term=GO:0046912;gbkey=CDS;gene=citZ;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390792.1;locus_tag=NM058_07035;product=citrate synthase;protein_id=UTX06303.1;transl_table=11 CP101611.1 Genbank gene 1367512 1368783 . + . ID=gene-NM058_07040;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=NM058_07040 CP101611.1 Protein Homology CDS 1367512 1368783 . + 0 ID=cds-UTX06304.1;Parent=gene-NM058_07040;Dbxref=NCBI_GP:UTX06304.1;Name=UTX06304.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390791.1;locus_tag=NM058_07040;product=NADP-dependent isocitrate dehydrogenase;protein_id=UTX06304.1;transl_table=11 CP101611.1 Genbank gene 1368827 1369765 . + . ID=gene-NM058_07045;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=NM058_07045 CP101611.1 Protein Homology CDS 1368827 1369765 . + 0 ID=cds-UTX06305.1;Parent=gene-NM058_07045;Dbxref=NCBI_GP:UTX06305.1;Name=UTX06305.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=mdh;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390790.1;locus_tag=NM058_07045;product=malate dehydrogenase;protein_id=UTX06305.1;transl_table=11 CP101611.1 Genbank gene 1369979 1370701 . + . ID=gene-NM058_07050;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=NM058_07050 CP101611.1 Protein Homology CDS 1369979 1370701 . + 0 ID=cds-UTX06306.1;Parent=gene-NM058_07050;Dbxref=NCBI_GP:UTX06306.1;Name=UTX06306.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390789.2;locus_tag=NM058_07050;product=two-component system response regulator PhoP;protein_id=UTX06306.1;transl_table=11 CP101611.1 Genbank pseudogene 1370694 1372431 . + . ID=gene-NM058_07055;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=pseudogene;locus_tag=NM058_07055;pseudo=true CP101611.1 Protein Homology CDS 1370694 1372431 . + 0 ID=cds-NM058_07055;Parent=gene-NM058_07055;Note=frameshifted;gbkey=CDS;gene=phoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390788.1;locus_tag=NM058_07055;product=sensory box histidine kinase PhoR;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1372673 1375314 . + . ID=gene-NM058_07060;Name=polA;gbkey=Gene;gene=polA;gene_biotype=pseudogene;locus_tag=NM058_07060;pseudo=true CP101611.1 Protein Homology CDS 1372673 1375314 . + 0 ID=cds-NM058_07060;Parent=gene-NM058_07060;Note=frameshifted;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390787.1;locus_tag=NM058_07060;product=DNA polymerase I;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1375337 1376167 . + . ID=gene-NM058_07065;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=NM058_07065 CP101611.1 Protein Homology CDS 1375337 1376167 . + 0 ID=cds-UTX06307.1;Parent=gene-NM058_07065;Dbxref=NCBI_GP:UTX06307.1;Name=UTX06307.1;Ontology_term=GO:0006281,GO:0008534,GO:0005737;gbkey=CDS;gene=mutM;go_component=cytoplasm|0005737||IEA;go_function=oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390786.2;locus_tag=NM058_07065;product=DNA-formamidopyrimidine glycosylase;protein_id=UTX06307.1;transl_table=11 CP101611.1 Genbank gene 1376335 1376967 . + . ID=gene-NM058_07070;Name=ytaF;gbkey=Gene;gene=ytaF;gene_biotype=protein_coding;locus_tag=NM058_07070 CP101611.1 Protein Homology CDS 1376335 1376967 . + 0 ID=cds-UTX06308.1;Parent=gene-NM058_07070;Dbxref=NCBI_GP:UTX06308.1;Name=UTX06308.1;Ontology_term=GO:0030436,GO:0003674,GO:0016021;gbkey=CDS;gene=ytaF;go_component=integral component of membrane|0016021||IEA;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390785.2;locus_tag=NM058_07070;product=sporulation membrane protein YtaF;protein_id=UTX06308.1;transl_table=11 CP101611.1 Genbank gene 1376983 1377576 . + . ID=gene-NM058_07075;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=NM058_07075 CP101611.1 Protein Homology CDS 1376983 1377576 . + 0 ID=cds-UTX06309.1;Parent=gene-NM058_07075;Dbxref=NCBI_GP:UTX06309.1;Name=UTX06309.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390784.1;locus_tag=NM058_07075;product=dephospho-CoA kinase;protein_id=UTX06309.1;transl_table=11 CP101611.1 Genbank gene 1377614 1378456 . - . ID=gene-NM058_07080;Name=ytbE;gbkey=Gene;gene=ytbE;gene_biotype=protein_coding;locus_tag=NM058_07080 CP101611.1 Protein Homology CDS 1377614 1378456 . - 0 ID=cds-UTX06310.1;Parent=gene-NM058_07080;Dbxref=NCBI_GP:UTX06310.1;Name=UTX06310.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ytbE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390783.1;locus_tag=NM058_07080;product=aldo/keto reductase YtbE;protein_id=UTX06310.1;transl_table=11 CP101611.1 Genbank gene 1378480 1379676 . - . ID=gene-NM058_07085;Name=NM058_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07085 CP101611.1 Protein Homology CDS 1378480 1379676 . - 0 ID=cds-UTX06986.1;Parent=gene-NM058_07085;Dbxref=NCBI_GP:UTX06986.1;Name=UTX06986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390782.1;locus_tag=NM058_07085;product=MFS transporter;protein_id=UTX06986.1;transl_table=11 CP101611.1 Genbank pseudogene 1379860 1380238 . + . ID=gene-NM058_07090;Name=NM058_07090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07090;pseudo=true CP101611.1 Protein Homology CDS 1379860 1380238 . + 0 ID=cds-NM058_07090;Parent=gene-NM058_07090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390781.1;locus_tag=NM058_07090;product=winged helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1380440 1381461 . + . ID=gene-NM058_07095;Name=NM058_07095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07095;pseudo=true CP101611.1 Protein Homology CDS 1380440 1381461 . + 0 ID=cds-NM058_07095;Parent=gene-NM058_07095;Note=frameshifted;Ontology_term=GO:0006006,GO:0016620;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390780.1;locus_tag=NM058_07095;product=glyceraldehyde-3-phosphate dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1381700 1382080 . + . ID=gene-NM058_07100;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=NM058_07100 CP101611.1 Protein Homology CDS 1381700 1382080 . + 0 ID=cds-UTX06311.1;Parent=gene-NM058_07100;Dbxref=NCBI_GP:UTX06311.1;Name=UTX06311.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390779.2;locus_tag=NM058_07100;product=adenosylmethionine decarboxylase;protein_id=UTX06311.1;transl_table=11 CP101611.1 Genbank pseudogene 1382354 1382811 . + . ID=gene-NM058_07105;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=pseudogene;locus_tag=NM058_07105;pseudo=true CP101611.1 Protein Homology CDS 1382354 1382811 . + 0 ID=cds-NM058_07105;Parent=gene-NM058_07105;Note=frameshifted;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390778.1;locus_tag=NM058_07105;product=transcriptional regulator NrdR;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1382926 1384347 . + . ID=gene-NM058_07110;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=NM058_07110 CP101611.1 Protein Homology CDS 1382926 1384347 . + 0 ID=cds-UTX06312.1;Parent=gene-NM058_07110;Dbxref=NCBI_GP:UTX06312.1;Name=UTX06312.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390777.1;locus_tag=NM058_07110;product=replication initiation membrane attachment protein DnaB;protein_id=UTX06312.1;transl_table=11 CP101611.1 Genbank pseudogene 1384375 1385309 . + . ID=gene-NM058_07115;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=pseudogene;locus_tag=NM058_07115;pseudo=true CP101611.1 Protein Homology CDS 1384375 1385309 . + 0 ID=cds-NM058_07115;Parent=gene-NM058_07115;Note=frameshifted;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390776.1;locus_tag=NM058_07115;product=primosomal protein DnaI;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1385343 1385984 . + . ID=gene-NM058_07120;Name=NM058_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07120 CP101611.1 Protein Homology CDS 1385343 1385984 . + 0 ID=cds-UTX06313.1;Parent=gene-NM058_07120;Dbxref=NCBI_GP:UTX06313.1;Name=UTX06313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390775.1;locus_tag=NM058_07120;product=TVP38/TMEM64 family protein;protein_id=UTX06313.1;transl_table=11 CP101611.1 Genbank gene 1386063 1386908 . + . ID=gene-NM058_07125;Name=ytxC;gbkey=Gene;gene=ytxC;gene_biotype=protein_coding;locus_tag=NM058_07125 CP101611.1 Protein Homology CDS 1386063 1386908 . + 0 ID=cds-UTX06314.1;Parent=gene-NM058_07125;Dbxref=NCBI_GP:UTX06314.1;Name=UTX06314.1;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=ytxC;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390774.2;locus_tag=NM058_07125;product=putative sporulation protein YtxC;protein_id=UTX06314.1;transl_table=11 CP101611.1 Genbank gene 1387306 1389237 . + . ID=gene-NM058_07130;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=NM058_07130 CP101611.1 Protein Homology CDS 1387306 1389237 . + 0 ID=cds-UTX06315.1;Parent=gene-NM058_07130;Dbxref=NCBI_GP:UTX06315.1;Name=UTX06315.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390773.1;locus_tag=NM058_07130;product=threonine--tRNA ligase;protein_id=UTX06315.1;transl_table=11 CP101611.1 Genbank gene 1389280 1390062 . - . ID=gene-NM058_07135;Name=NM058_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07135 CP101611.1 Protein Homology CDS 1389280 1390062 . - 0 ID=cds-UTX06316.1;Parent=gene-NM058_07135;Dbxref=NCBI_GP:UTX06316.1;Name=UTX06316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010329706.1;locus_tag=NM058_07135;product=HAD family hydrolase;protein_id=UTX06316.1;transl_table=11 CP101611.1 Genbank gene 1390238 1392019 . + . ID=gene-NM058_07140;Name=lytS;gbkey=Gene;gene=lytS;gene_biotype=protein_coding;locus_tag=NM058_07140 CP101611.1 Protein Homology CDS 1390238 1392019 . + 0 ID=cds-UTX06317.1;Parent=gene-NM058_07140;Dbxref=NCBI_GP:UTX06317.1;Name=UTX06317.1;gbkey=CDS;gene=lytS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390771.1;locus_tag=NM058_07140;product=two-component system sensor histidine kinase LytS;protein_id=UTX06317.1;transl_table=11 CP101611.1 Genbank pseudogene 1391997 1392704 . + . ID=gene-NM058_07145;Name=NM058_07145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07145;pseudo=true CP101611.1 Protein Homology CDS 1391997 1392704 . + 0 ID=cds-NM058_07145;Parent=gene-NM058_07145;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390770.1;locus_tag=NM058_07145;product=LytTR family DNA-binding domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1392855 1393295 . + . ID=gene-NM058_07150;Name=lrgA;gbkey=Gene;gene=lrgA;gene_biotype=protein_coding;locus_tag=NM058_07150 CP101611.1 Protein Homology CDS 1392855 1393295 . + 0 ID=cds-UTX06318.1;Parent=gene-NM058_07150;Dbxref=NCBI_GP:UTX06318.1;Name=UTX06318.1;gbkey=CDS;gene=lrgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390769.1;locus_tag=NM058_07150;product=antiholin-like murein hydrolase modulator LrgA;protein_id=UTX06318.1;transl_table=11 CP101611.1 Genbank gene 1393316 1394011 . + . ID=gene-NM058_07155;Name=lrgB;gbkey=Gene;gene=lrgB;gene_biotype=protein_coding;locus_tag=NM058_07155 CP101611.1 Protein Homology CDS 1393316 1394011 . + 0 ID=cds-UTX06319.1;Parent=gene-NM058_07155;Dbxref=NCBI_GP:UTX06319.1;Name=UTX06319.1;gbkey=CDS;gene=lrgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390768.1;locus_tag=NM058_07155;product=antiholin-like protein LrgB;protein_id=UTX06319.1;transl_table=11 CP101611.1 Genbank gene 1394041 1394703 . - . ID=gene-NM058_07160;Name=NM058_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07160 CP101611.1 Protein Homology CDS 1394041 1394703 . - 0 ID=cds-UTX06320.1;Parent=gene-NM058_07160;Dbxref=NCBI_GP:UTX06320.1;Name=UTX06320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390767.2;locus_tag=NM058_07160;product=hypothetical protein;protein_id=UTX06320.1;transl_table=11 CP101611.1 cmsearch sequence_feature 1395149 1395279 . + . ID=id-CP101611.1:1395149..1395279;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP101611.1 Genbank gene 1395337 1395858 . + . ID=gene-NM058_07165;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=NM058_07165 CP101611.1 Protein Homology CDS 1395337 1395858 . + 0 ID=cds-UTX06987.1;Parent=gene-NM058_07165;Dbxref=NCBI_GP:UTX06987.1;Name=UTX06987.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390765.1;locus_tag=NM058_07165;product=translation initiation factor IF-3;protein_id=UTX06987.1;transl_table=11 CP101611.1 Genbank gene 1395871 1396071 . + . ID=gene-NM058_07170;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=NM058_07170 CP101611.1 Protein Homology CDS 1395871 1396071 . + 0 ID=cds-UTX06321.1;Parent=gene-NM058_07170;Dbxref=NCBI_GP:UTX06321.1;Name=UTX06321.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390764.1;locus_tag=NM058_07170;product=50S ribosomal protein L35;protein_id=UTX06321.1;transl_table=11 CP101611.1 Genbank pseudogene 1396103 1396461 . + . ID=gene-NM058_07175;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=pseudogene;locus_tag=NM058_07175;pseudo=true CP101611.1 Protein Homology CDS 1396103 1396461 . + 0 ID=cds-NM058_07175;Parent=gene-NM058_07175;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390763.1;locus_tag=NM058_07175;product=50S ribosomal protein L20;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1396517 1396784 . + . ID=gene-NM058_07180;Name=NM058_07180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07180;pseudo=true CP101611.1 Protein Homology CDS 1396517 1396784 . + 0 ID=cds-NM058_07180;Parent=gene-NM058_07180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390762.1;locus_tag=NM058_07180;product=DUF1294 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1396801 1397193 . - . ID=gene-NM058_07185;Name=ysdB;gbkey=Gene;gene=ysdB;gene_biotype=protein_coding;locus_tag=NM058_07185 CP101611.1 Protein Homology CDS 1396801 1397193 . - 0 ID=cds-UTX06322.1;Parent=gene-NM058_07185;Dbxref=NCBI_GP:UTX06322.1;Name=UTX06322.1;gbkey=CDS;gene=ysdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390761.1;locus_tag=NM058_07185;product=sigma W pathway protein YsdB;protein_id=UTX06322.1;transl_table=11 CP101611.1 Genbank gene 1397377 1398462 . + . ID=gene-NM058_07190;Name=NM058_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07190 CP101611.1 Protein Homology CDS 1397377 1398462 . + 0 ID=cds-UTX06323.1;Parent=gene-NM058_07190;Dbxref=NCBI_GP:UTX06323.1;Name=UTX06323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390760.1;locus_tag=NM058_07190;product=M42 family metallopeptidase;protein_id=UTX06323.1;transl_table=11 CP101611.1 Genbank gene 1398660 1399631 . + . ID=gene-NM058_07195;Name=abnA;gbkey=Gene;gene=abnA;gene_biotype=protein_coding;locus_tag=NM058_07195 CP101611.1 Protein Homology CDS 1398660 1399631 . + 0 ID=cds-UTX06324.1;Parent=gene-NM058_07195;Dbxref=NCBI_GP:UTX06324.1;Name=UTX06324.1;gbkey=CDS;gene=abnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390759.2;locus_tag=NM058_07195;product=arabinan endo-1%2C5-alpha-L-arabinosidase AbnA;protein_id=UTX06324.1;transl_table=11 CP101611.1 Genbank gene 1399807 1401297 . + . ID=gene-NM058_07200;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=NM058_07200 CP101611.1 Protein Homology CDS 1399807 1401297 . + 0 ID=cds-UTX06325.1;Parent=gene-NM058_07200;Dbxref=NCBI_GP:UTX06325.1;Name=UTX06325.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390758.2;locus_tag=NM058_07200;product=L-arabinose isomerase;protein_id=UTX06325.1;transl_table=11 CP101611.1 Genbank gene 1401313 1402998 . + . ID=gene-NM058_07205;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=NM058_07205 CP101611.1 Protein Homology CDS 1401313 1402998 . + 0 ID=cds-UTX06326.1;Parent=gene-NM058_07205;Dbxref=NCBI_GP:UTX06326.1;Name=UTX06326.1;Ontology_term=GO:0019568,GO:0008741;gbkey=CDS;gene=araB;go_function=ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003237719.1;locus_tag=NM058_07205;product=ribulokinase;protein_id=UTX06326.1;transl_table=11 CP101611.1 Genbank gene 1403012 1403701 . + . ID=gene-NM058_07210;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=NM058_07210 CP101611.1 Protein Homology CDS 1403012 1403701 . + 0 ID=cds-UTX06327.1;Parent=gene-NM058_07210;Dbxref=NCBI_GP:UTX06327.1;Name=UTX06327.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390756.1;locus_tag=NM058_07210;product=L-ribulose-5-phosphate 4-epimerase;protein_id=UTX06327.1;transl_table=11 CP101611.1 Genbank pseudogene 1403679 1404496 . + . ID=gene-NM058_07215;Name=araL;gbkey=Gene;gene=araL;gene_biotype=pseudogene;locus_tag=NM058_07215;pseudo=true CP101611.1 Protein Homology CDS 1403679 1404496 . + 0 ID=cds-NM058_07215;Parent=gene-NM058_07215;Note=frameshifted;gbkey=CDS;gene=araL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390755.1;locus_tag=NM058_07215;product=sugar-phosphatase AraL;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1404493 1405677 . + . ID=gene-NM058_07220;Name=egsA;gbkey=Gene;gene=egsA;gene_biotype=protein_coding;locus_tag=NM058_07220 CP101611.1 Protein Homology CDS 1404493 1405677 . + 0 ID=cds-UTX06328.1;Parent=gene-NM058_07220;Dbxref=NCBI_GP:UTX06328.1;Name=UTX06328.1;gbkey=CDS;gene=egsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390754.1;locus_tag=NM058_07220;product=sn-glycerol-1-phosphate dehydrogenase;protein_id=UTX06328.1;transl_table=11 CP101611.1 Genbank pseudogene 1405708 1407008 . + . ID=gene-NM058_07225;Name=NM058_07225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07225;pseudo=true CP101611.1 Protein Homology CDS 1405708 1407008 . + 0 ID=cds-NM058_07225;Parent=gene-NM058_07225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390753.2;locus_tag=NM058_07225;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1407044 1407985 . + . ID=gene-NM058_07230;Name=NM058_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07230 CP101611.1 Protein Homology CDS 1407044 1407985 . + 0 ID=cds-UTX06329.1;Parent=gene-NM058_07230;Dbxref=NCBI_GP:UTX06329.1;Name=UTX06329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390752.1;locus_tag=NM058_07230;product=sugar ABC transporter permease;protein_id=UTX06329.1;transl_table=11 CP101611.1 Genbank pseudogene 1407986 1408830 . + . ID=gene-NM058_07235;Name=araQ;gbkey=Gene;gene=araQ;gene_biotype=pseudogene;locus_tag=NM058_07235;pseudo=true CP101611.1 Protein Homology CDS 1407986 1408830 . + 0 ID=cds-NM058_07235;Parent=gene-NM058_07235;Note=frameshifted;gbkey=CDS;gene=araQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390751.2;locus_tag=NM058_07235;product=arabinose ABC transporter permease AraQ;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1408849 1410351 . + . ID=gene-NM058_07240;Name=abfA;gbkey=Gene;gene=abfA;gene_biotype=protein_coding;locus_tag=NM058_07240 CP101611.1 Protein Homology CDS 1408849 1410351 . + 0 ID=cds-UTX06330.1;Parent=gene-NM058_07240;Dbxref=NCBI_GP:UTX06330.1;Name=UTX06330.1;gbkey=CDS;gene=abfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390750.2;locus_tag=NM058_07240;product=alpha-L-arabinofuranosidase AbfA;protein_id=UTX06330.1;transl_table=11 CP101611.1 Genbank gene 1410501 1410827 . + . ID=gene-NM058_07245;Name=NM058_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07245 CP101611.1 Protein Homology CDS 1410501 1410827 . + 0 ID=cds-UTX06988.1;Parent=gene-NM058_07245;Dbxref=NCBI_GP:UTX06988.1;Name=UTX06988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259126.1;locus_tag=NM058_07245;product=PadR family transcriptional regulator;protein_id=UTX06988.1;transl_table=11 CP101611.1 Genbank gene 1410824 1411378 . + . ID=gene-NM058_07250;Name=NM058_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07250 CP101611.1 Protein Homology CDS 1410824 1411378 . + 0 ID=cds-UTX06331.1;Parent=gene-NM058_07250;Dbxref=NCBI_GP:UTX06331.1;Name=UTX06331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003222449.1;locus_tag=NM058_07250;product=DUF1700 domain-containing protein;protein_id=UTX06331.1;transl_table=11 CP101611.1 Genbank gene 1411375 1412268 . + . ID=gene-NM058_07255;Name=NM058_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07255 CP101611.1 Protein Homology CDS 1411375 1412268 . + 0 ID=cds-UTX06332.1;Parent=gene-NM058_07255;Dbxref=NCBI_GP:UTX06332.1;Name=UTX06332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014114716.1;locus_tag=NM058_07255;product=DUF4097 domain-containing protein;protein_id=UTX06332.1;transl_table=11 CP101611.1 Genbank pseudogene 1412380 1414175 . + . ID=gene-NM058_07260;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=pseudogene;locus_tag=NM058_07260;pseudo=true CP101611.1 Protein Homology CDS 1412380 1414175 . + 0 ID=cds-NM058_07260;Parent=gene-NM058_07260;Note=frameshifted;gbkey=CDS;gene=cstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390749.2;locus_tag=NM058_07260;product=carbon starvation protein CstA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1414118 1414306 . + . ID=gene-NM058_07265;Name=NM058_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07265 CP101611.1 Protein Homology CDS 1414118 1414306 . + 0 ID=cds-UTX06333.1;Parent=gene-NM058_07265;Dbxref=NCBI_GP:UTX06333.1;Name=UTX06333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513996.1;locus_tag=NM058_07265;product=hypothetical protein;protein_id=UTX06333.1;transl_table=11 CP101611.1 Genbank gene 1414221 1414589 . + . ID=gene-NM058_07270;Name=NM058_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07270 CP101611.1 Protein Homology CDS 1414221 1414589 . + 0 ID=cds-UTX06989.1;Parent=gene-NM058_07270;Dbxref=NCBI_GP:UTX06989.1;Name=UTX06989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015384319.1;locus_tag=NM058_07270;product=VOC family protein;protein_id=UTX06989.1;transl_table=11 CP101611.1 Genbank pseudogene 1414626 1415958 . - . ID=gene-NM058_07275;Name=NM058_07275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07275;pseudo=true CP101611.1 Protein Homology CDS 1414626 1415958 . - 0 ID=cds-NM058_07275;Parent=gene-NM058_07275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390747.1;locus_tag=NM058_07275;product=(Fe-S)-binding protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1415955 1417367 . - . ID=gene-NM058_07280;Name=glcD;gbkey=Gene;gene=glcD;gene_biotype=protein_coding;locus_tag=NM058_07280 CP101611.1 Protein Homology CDS 1415955 1417367 . - 0 ID=cds-UTX06334.1;Parent=gene-NM058_07280;Dbxref=NCBI_GP:UTX06334.1;Name=UTX06334.1;Ontology_term=GO:0005975,GO:0003973;gbkey=CDS;gene=glcD;go_function=(S)-2-hydroxy-acid oxidase activity|0003973||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390746.1;locus_tag=NM058_07280;product=glycolate oxidase subunit GlcD;protein_id=UTX06334.1;transl_table=11 CP101611.1 Genbank gene 1417470 1418576 . - . ID=gene-NM058_07285;Name=NM058_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07285 CP101611.1 Protein Homology CDS 1417470 1418576 . - 0 ID=cds-UTX06335.1;Parent=gene-NM058_07285;Dbxref=NCBI_GP:UTX06335.1;Name=UTX06335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390745.2;locus_tag=NM058_07285;product=helix-turn-helix domain-containing protein;protein_id=UTX06335.1;transl_table=11 CP101611.1 Genbank gene 1418645 1418860 . - . ID=gene-NM058_07290;Name=sspI;gbkey=Gene;gene=sspI;gene_biotype=protein_coding;locus_tag=NM058_07290 CP101611.1 Protein Homology CDS 1418645 1418860 . - 0 ID=cds-UTX06336.1;Parent=gene-NM058_07290;Dbxref=NCBI_GP:UTX06336.1;Name=UTX06336.1;gbkey=CDS;gene=sspI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390744.1;locus_tag=NM058_07290;product=small acid-soluble spore protein SspI;protein_id=UTX06336.1;transl_table=11 CP101611.1 Genbank gene 1418980 1419726 . + . ID=gene-NM058_07295;Name=NM058_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07295 CP101611.1 Protein Homology CDS 1418980 1419726 . + 0 ID=cds-UTX06337.1;Parent=gene-NM058_07295;Dbxref=NCBI_GP:UTX06337.1;Name=UTX06337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390743.1;locus_tag=NM058_07295;product=RNA methyltransferase;protein_id=UTX06337.1;transl_table=11 CP101611.1 Genbank gene 1419793 1419999 . - . ID=gene-NM058_07300;Name=NM058_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07300 CP101611.1 Protein Homology CDS 1419793 1419999 . - 0 ID=cds-UTX06338.1;Parent=gene-NM058_07300;Dbxref=NCBI_GP:UTX06338.1;Name=UTX06338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513995.1;locus_tag=NM058_07300;product=hypothetical protein;protein_id=UTX06338.1;transl_table=11 CP101611.1 Genbank gene 1420080 1421114 . + . ID=gene-NM058_07305;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=NM058_07305 CP101611.1 Protein Homology CDS 1420080 1421114 . + 0 ID=cds-UTX06339.1;Parent=gene-NM058_07305;Dbxref=NCBI_GP:UTX06339.1;Name=UTX06339.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390742.1;locus_tag=NM058_07305;product=phenylalanine--tRNA ligase subunit alpha;protein_id=UTX06339.1;transl_table=11 CP101611.1 Genbank pseudogene 1421130 1423543 . + . ID=gene-NM058_07310;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=pseudogene;locus_tag=NM058_07310;pseudo=true CP101611.1 Protein Homology CDS 1421130 1423543 . + 0 ID=cds-NM058_07310;Parent=gene-NM058_07310;Note=frameshifted;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390741.1;locus_tag=NM058_07310;product=phenylalanine--tRNA ligase subunit beta;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1423579 1424520 . - . ID=gene-NM058_07315;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=NM058_07315 CP101611.1 Protein Homology CDS 1423579 1424520 . - 0 ID=cds-UTX06340.1;Parent=gene-NM058_07315;Dbxref=NCBI_GP:UTX06340.1;Name=UTX06340.1;Ontology_term=GO:0006401,GO:0004523,GO:0005737;gbkey=CDS;gene=rnhC;go_component=cytoplasm|0005737||IEA;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390740.1;locus_tag=NM058_07315;product=ribonuclease HIII;protein_id=UTX06340.1;transl_table=11 CP101611.1 Genbank gene 1424654 1424911 . + . ID=gene-NM058_07320;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=NM058_07320 CP101611.1 Protein Homology CDS 1424654 1424911 . + 0 ID=cds-UTX06341.1;Parent=gene-NM058_07320;Dbxref=NCBI_GP:UTX06341.1;Name=UTX06341.1;Ontology_term=GO:0051301;gbkey=CDS;gene=zapA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390739.1;locus_tag=NM058_07320;product=cell division protein ZapA;protein_id=UTX06341.1;transl_table=11 CP101611.1 Genbank gene 1424918 1425451 . + . ID=gene-NM058_07325;Name=NM058_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07325 CP101611.1 Protein Homology CDS 1424918 1425451 . + 0 ID=cds-UTX06342.1;Parent=gene-NM058_07325;Dbxref=NCBI_GP:UTX06342.1;Name=UTX06342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390738.1;locus_tag=NM058_07325;product=CvpA family protein;protein_id=UTX06342.1;transl_table=11 CP101611.1 Genbank pseudogene 1425524 1427235 . + . ID=gene-NM058_07330;Name=polX;gbkey=Gene;gene=polX;gene_biotype=pseudogene;locus_tag=NM058_07330;pseudo=true CP101611.1 Protein Homology CDS 1425524 1427235 . + 0 ID=cds-NM058_07330;Parent=gene-NM058_07330;Note=frameshifted;Ontology_term=GO:0006281,GO:0003677,GO:0003887;gbkey=CDS;gene=polX;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390737.1;locus_tag=NM058_07330;product=DNA polymerase/3'-5' exonuclease PolX;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1427256 1429610 . + . ID=gene-NM058_07335;Name=NM058_07335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07335;pseudo=true CP101611.1 Protein Homology CDS 1427256 1429610 . + 0 ID=cds-NM058_07335;Parent=gene-NM058_07335;Note=frameshifted;Ontology_term=GO:0006298,GO:0045910,GO:0004519,GO:0005524,GO:0016887,GO:0030983;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA,negative regulation of DNA recombination|0045910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390736.1;locus_tag=NM058_07335;product=endonuclease MutS2;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1429625 1430029 . + . ID=gene-NM058_07340;Name=NM058_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07340 CP101611.1 Protein Homology CDS 1429625 1430029 . + 0 ID=cds-UTX06343.1;Parent=gene-NM058_07340;Dbxref=NCBI_GP:UTX06343.1;Name=UTX06343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390735.1;locus_tag=NM058_07340;product=DUF350 domain-containing protein;protein_id=UTX06343.1;transl_table=11 CP101611.1 Genbank gene 1430217 1431899 . + . ID=gene-NM058_07345;Name=lcfA;gbkey=Gene;gene=lcfA;gene_biotype=protein_coding;locus_tag=NM058_07345 CP101611.1 Protein Homology CDS 1430217 1431899 . + 0 ID=cds-UTX06344.1;Parent=gene-NM058_07345;Dbxref=NCBI_GP:UTX06344.1;Name=UTX06344.1;gbkey=CDS;gene=lcfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390734.1;locus_tag=NM058_07345;product=long-chain-fatty-acid--CoA ligase LcfA;protein_id=UTX06344.1;transl_table=11 CP101611.1 Genbank gene 1432010 1432594 . + . ID=gene-NM058_07350;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=NM058_07350 CP101611.1 Protein Homology CDS 1432010 1432594 . + 0 ID=cds-UTX06345.1;Parent=gene-NM058_07350;Dbxref=NCBI_GP:UTX06345.1;Name=UTX06345.1;gbkey=CDS;gene=fadR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390733.1;locus_tag=NM058_07350;product=fatty acid metabolism transcriptional regulator FadR;protein_id=UTX06345.1;transl_table=11 CP101611.1 Genbank pseudogene 1432609 1433384 . + . ID=gene-NM058_07355;Name=NM058_07355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07355;pseudo=true CP101611.1 Protein Homology CDS 1432609 1433384 . + 0 ID=cds-NM058_07355;Parent=gene-NM058_07355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390732.1;locus_tag=NM058_07355;product=enoyl-CoA hydratase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1433399 1434171 . + . ID=gene-NM058_07360;Name=etfB;gbkey=Gene;gene=etfB;gene_biotype=pseudogene;locus_tag=NM058_07360;pseudo=true CP101611.1 Protein Homology CDS 1433399 1434171 . + 0 ID=cds-NM058_07360;Parent=gene-NM058_07360;Note=frameshifted;gbkey=CDS;gene=etfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390731.1;locus_tag=NM058_07360;product=electron transfer flavoprotein subunit beta;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1434207 1435184 . + . ID=gene-NM058_07365;Name=etfA;gbkey=Gene;gene=etfA;gene_biotype=protein_coding;locus_tag=NM058_07365 CP101611.1 Protein Homology CDS 1434207 1435184 . + 0 ID=cds-UTX06346.1;Parent=gene-NM058_07365;Dbxref=NCBI_GP:UTX06346.1;Name=UTX06346.1;gbkey=CDS;gene=etfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390730.1;locus_tag=NM058_07365;product=electron transfer flavoprotein subunit alpha;protein_id=UTX06346.1;transl_table=11 CP101611.1 Genbank pseudogene 1435398 1436884 . + . ID=gene-NM058_07370;Name=abfB;gbkey=Gene;gene=abfB;gene_biotype=pseudogene;locus_tag=NM058_07370;pseudo=true CP101611.1 Protein Homology CDS 1435398 1436884 . + 0 ID=cds-NM058_07370;Parent=gene-NM058_07370;Note=frameshifted;gbkey=CDS;gene=abfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390729.2;locus_tag=NM058_07370;product=alpha-L-arabinofuranosidase AbfB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1437211 1437525 . + . ID=gene-NM058_07375;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=NM058_07375 CP101611.1 Protein Homology CDS 1437211 1437525 . + 0 ID=cds-UTX06347.1;Parent=gene-NM058_07375;Dbxref=NCBI_GP:UTX06347.1;Name=UTX06347.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390728.1;locus_tag=NM058_07375;product=thioredoxin;protein_id=UTX06347.1;transl_table=11 CP101611.1 Genbank gene 1437661 1439433 . + . ID=gene-NM058_07380;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=NM058_07380 CP101611.1 Protein Homology CDS 1437661 1439433 . + 0 ID=cds-UTX06348.1;Parent=gene-NM058_07380;Dbxref=NCBI_GP:UTX06348.1;Name=UTX06348.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390727.2;locus_tag=NM058_07380;product=excinuclease ABC subunit UvrC;protein_id=UTX06348.1;transl_table=11 CP101611.1 cmsearch riboswitch 1439498 1439677 . + . ID=id-CP101611.1:1439498..1439677;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 1439804 1441033 . + . ID=gene-NM058_07385;Name=NM058_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07385 CP101611.1 Protein Homology CDS 1439804 1441033 . + 0 ID=cds-UTX06349.1;Parent=gene-NM058_07385;Dbxref=NCBI_GP:UTX06349.1;Name=UTX06349.1;Ontology_term=GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390725.1;locus_tag=NM058_07385;product=aspartate kinase;protein_id=UTX06349.1;transl_table=11 CP101611.1 Genbank gene 1441079 1441525 . - . ID=gene-NM058_07390;Name=NM058_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07390 CP101611.1 Protein Homology CDS 1441079 1441525 . - 0 ID=cds-UTX06350.1;Parent=gene-NM058_07390;Dbxref=NCBI_GP:UTX06350.1;Name=UTX06350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390724.1;locus_tag=NM058_07390;product=YslB family protein;protein_id=UTX06350.1;transl_table=11 CP101611.1 Genbank gene 1441816 1442424 . + . ID=gene-NM058_07395;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=NM058_07395 CP101611.1 Protein Homology CDS 1441816 1442424 . + 0 ID=cds-UTX06351.1;Parent=gene-NM058_07395;Dbxref=NCBI_GP:UTX06351.1;Name=UTX06351.1;gbkey=CDS;gene=sdhC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390723.1;locus_tag=NM058_07395;product=succinate dehydrogenase cytochrome B558;protein_id=UTX06351.1;transl_table=11 CP101611.1 Genbank gene 1442458 1444215 . + . ID=gene-NM058_07400;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=NM058_07400 CP101611.1 Protein Homology CDS 1442458 1444215 . + 0 ID=cds-UTX06352.1;Parent=gene-NM058_07400;Dbxref=NCBI_GP:UTX06352.1;Name=UTX06352.1;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390722.2;locus_tag=NM058_07400;product=succinate dehydrogenase flavoprotein subunit;protein_id=UTX06352.1;transl_table=11 CP101611.1 Genbank gene 1444218 1444979 . + . ID=gene-NM058_07405;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=NM058_07405 CP101611.1 Protein Homology CDS 1444218 1444979 . + 0 ID=cds-UTX06353.1;Parent=gene-NM058_07405;Dbxref=NCBI_GP:UTX06353.1;Name=UTX06353.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=sdhB;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390721.1;locus_tag=NM058_07405;product=succinate dehydrogenase iron-sulfur subunit;protein_id=UTX06353.1;transl_table=11 CP101611.1 Genbank pseudogene 1445038 1445480 . + . ID=gene-NM058_07410;Name=NM058_07410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07410;pseudo=true CP101611.1 Protein Homology CDS 1445038 1445480 . + 0 ID=cds-NM058_07410;Parent=gene-NM058_07410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259103.1;locus_tag=NM058_07410;product=acyl-CoA thioesterase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1445596 1445820 . + . ID=gene-NM058_07415;Name=gerE;gbkey=Gene;gene=gerE;gene_biotype=protein_coding;locus_tag=NM058_07415 CP101611.1 Protein Homology CDS 1445596 1445820 . + 0 ID=cds-UTX06354.1;Parent=gene-NM058_07415;Dbxref=NCBI_GP:UTX06354.1;Name=UTX06354.1;gbkey=CDS;gene=gerE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390719.2;locus_tag=NM058_07415;product=spore germination transcription factor GerE;protein_id=UTX06354.1;transl_table=11 CP101611.1 Genbank gene 1446070 1446510 . + . ID=gene-NM058_07420;Name=NM058_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07420 CP101611.1 Protein Homology CDS 1446070 1446510 . + 0 ID=cds-UTX06355.1;Parent=gene-NM058_07420;Dbxref=NCBI_GP:UTX06355.1;Name=UTX06355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390718.1;locus_tag=NM058_07420;product=MarR family transcriptional regulator;protein_id=UTX06355.1;transl_table=11 CP101611.1 Genbank gene 1446518 1447336 . + . ID=gene-NM058_07425;Name=racE;gbkey=Gene;gene=racE;gene_biotype=protein_coding;locus_tag=NM058_07425 CP101611.1 Protein Homology CDS 1446518 1447336 . + 0 ID=cds-UTX06356.1;Parent=gene-NM058_07425;Dbxref=NCBI_GP:UTX06356.1;Name=UTX06356.1;Ontology_term=GO:0006807,GO:0008881;gbkey=CDS;gene=racE;go_function=glutamate racemase activity|0008881||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390717.2;locus_tag=NM058_07425;product=glutamate racemase;protein_id=UTX06356.1;transl_table=11 CP101611.1 Genbank gene 1447450 1448550 . + . ID=gene-NM058_07430;Name=gerM;gbkey=Gene;gene=gerM;gene_biotype=protein_coding;locus_tag=NM058_07430 CP101611.1 Protein Homology CDS 1447450 1448550 . + 0 ID=cds-UTX06357.1;Parent=gene-NM058_07430;Dbxref=NCBI_GP:UTX06357.1;Name=UTX06357.1;gbkey=CDS;gene=gerM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390716.1;locus_tag=NM058_07430;product=spore germination protein GerM;protein_id=UTX06357.1;transl_table=11 CP101611.1 Genbank pseudogene 1448662 1449398 . + . ID=gene-NM058_07435;Name=NM058_07435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07435;pseudo=true CP101611.1 Protein Homology CDS 1448662 1449398 . + 0 ID=cds-NM058_07435;Parent=gene-NM058_07435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390715.1;locus_tag=NM058_07435;product=ribonuclease PH;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1449411 1450007 . + . ID=gene-NM058_07440;Name=NM058_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07440 CP101611.1 Protein Homology CDS 1449411 1450007 . + 0 ID=cds-UTX06358.1;Parent=gene-NM058_07440;Dbxref=NCBI_GP:UTX06358.1;Name=UTX06358.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside-triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390714.1;locus_tag=NM058_07440;product=XTP/dITP diphosphatase;protein_id=UTX06358.1;transl_table=11 CP101611.1 Genbank gene 1450024 1450533 . + . ID=gene-NM058_07445;Name=NM058_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07445 CP101611.1 Protein Homology CDS 1450024 1450533 . + 0 ID=cds-UTX06359.1;Parent=gene-NM058_07445;Dbxref=NCBI_GP:UTX06359.1;Name=UTX06359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390713.2;locus_tag=NM058_07445;product=metallophosphoesterase;protein_id=UTX06359.1;transl_table=11 CP101611.1 Genbank gene 1450663 1450736 . + . ID=gene-NM058_07450;Name=NM058_07450;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_07450 CP101611.1 tRNAscan-SE tRNA 1450663 1450736 . + . ID=rna-NM058_07450;Parent=gene-NM058_07450;anticodon=(pos:1450697..1450699);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_07450;product=tRNA-Arg CP101611.1 tRNAscan-SE exon 1450663 1450736 . + . ID=exon-NM058_07450-1;Parent=rna-NM058_07450;anticodon=(pos:1450697..1450699);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_07450;product=tRNA-Arg CP101611.1 Genbank gene 1450799 1451623 . - . ID=gene-NM058_07455;Name=NM058_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07455 CP101611.1 Protein Homology CDS 1450799 1451623 . - 0 ID=cds-UTX06360.1;Parent=gene-NM058_07455;Dbxref=NCBI_GP:UTX06360.1;Name=UTX06360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390712.3;locus_tag=NM058_07455;product=YsnF/AvaK domain-containing protein;protein_id=UTX06360.1;transl_table=11 CP101611.1 Genbank gene 1451813 1452268 . - . ID=gene-NM058_07460;Name=NM058_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07460 CP101611.1 Protein Homology CDS 1451813 1452268 . - 0 ID=cds-UTX06361.1;Parent=gene-NM058_07460;Dbxref=NCBI_GP:UTX06361.1;Name=UTX06361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390711.1;locus_tag=NM058_07460;product=GNAT family N-acetyltransferase;protein_id=UTX06361.1;transl_table=11 CP101611.1 Genbank gene 1452456 1452782 . - . ID=gene-NM058_07465;Name=NM058_07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07465 CP101611.1 Protein Homology CDS 1452456 1452782 . - 0 ID=cds-UTX06362.1;Parent=gene-NM058_07465;Dbxref=NCBI_GP:UTX06362.1;Name=UTX06362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390710.1;locus_tag=NM058_07465;product=hypothetical protein;protein_id=UTX06362.1;transl_table=11 CP101611.1 cmsearch binding_site 1453228 1453474 . + . ID=id-CP101611.1:1453228..1453474;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 CP101611.1 Genbank pseudogene 1453597 1455320 . + . ID=gene-NM058_07470;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=pseudogene;locus_tag=NM058_07470;pseudo=true CP101611.1 Protein Homology CDS 1453597 1455320 . + 0 ID=cds-NM058_07470;Parent=gene-NM058_07470;Note=frameshifted;Ontology_term=GO:0003984;gbkey=CDS;gene=ilvB;go_function=acetolactate synthase activity|0003984||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390709.1;locus_tag=NM058_07470;product=acetolactate synthase large subunit;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1455317 1455835 . + . ID=gene-NM058_07475;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=NM058_07475 CP101611.1 Protein Homology CDS 1455317 1455835 . + 0 ID=cds-UTX06363.1;Parent=gene-NM058_07475;Dbxref=NCBI_GP:UTX06363.1;Name=UTX06363.1;Ontology_term=GO:0009097,GO:0009099,GO:0003984,GO:0005948;gbkey=CDS;gene=ilvN;go_component=acetolactate synthase complex|0005948||IEA;go_function=acetolactate synthase activity|0003984||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390708.2;locus_tag=NM058_07475;product=acetolactate synthase small subunit;protein_id=UTX06363.1;transl_table=11 CP101611.1 Genbank gene 1455859 1456887 . + . ID=gene-NM058_07480;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=NM058_07480 CP101611.1 Protein Homology CDS 1455859 1456887 . + 0 ID=cds-UTX06364.1;Parent=gene-NM058_07480;Dbxref=NCBI_GP:UTX06364.1;Name=UTX06364.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390707.1;locus_tag=NM058_07480;product=ketol-acid reductoisomerase;protein_id=UTX06364.1;transl_table=11 CP101611.1 Genbank gene 1456874 1458430 . + . ID=gene-NM058_07485;Name=NM058_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07485 CP101611.1 Protein Homology CDS 1456874 1458430 . + 0 ID=cds-UTX06365.1;Parent=gene-NM058_07485;Dbxref=NCBI_GP:UTX06365.1;Name=UTX06365.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390706.1;locus_tag=NM058_07485;product=2-isopropylmalate synthase;protein_id=UTX06365.1;transl_table=11 CP101611.1 Genbank gene 1458451 1459548 . + . ID=gene-NM058_07490;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=NM058_07490 CP101611.1 Protein Homology CDS 1458451 1459548 . + 0 ID=cds-UTX06366.1;Parent=gene-NM058_07490;Dbxref=NCBI_GP:UTX06366.1;Name=UTX06366.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390705.2;locus_tag=NM058_07490;product=3-isopropylmalate dehydrogenase;protein_id=UTX06366.1;transl_table=11 CP101611.1 Genbank gene 1459598 1461016 . + . ID=gene-NM058_07495;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=NM058_07495 CP101611.1 Protein Homology CDS 1459598 1461016 . + 0 ID=cds-UTX06367.1;Parent=gene-NM058_07495;Dbxref=NCBI_GP:UTX06367.1;Name=UTX06367.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390704.1;locus_tag=NM058_07495;product=3-isopropylmalate dehydratase large subunit;protein_id=UTX06367.1;transl_table=11 CP101611.1 Genbank gene 1461029 1461628 . + . ID=gene-NM058_07500;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=NM058_07500 CP101611.1 Protein Homology CDS 1461029 1461628 . + 0 ID=cds-UTX06368.1;Parent=gene-NM058_07500;Dbxref=NCBI_GP:UTX06368.1;Name=UTX06368.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390703.1;locus_tag=NM058_07500;product=3-isopropylmalate dehydratase small subunit;protein_id=UTX06368.1;transl_table=11 CP101611.1 Genbank gene 1461745 1462749 . + . ID=gene-NM058_07505;Name=ddcA;gbkey=Gene;gene=ddcA;gene_biotype=protein_coding;gene_synonym=ysoA;locus_tag=NM058_07505 CP101611.1 Protein Homology CDS 1461745 1462749 . + 0 ID=cds-UTX06369.1;Parent=gene-NM058_07505;Dbxref=NCBI_GP:UTX06369.1;Name=UTX06369.1;Note=acts as an antagonist to the cell cycle checkpoint enforcement protein YneA;gbkey=CDS;gene=ddcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390702.2;locus_tag=NM058_07505;product=DNA damage checkpoint antagonist DdcA;protein_id=UTX06369.1;transl_table=11 CP101611.1 Genbank gene 1462977 1464251 . + . ID=gene-NM058_07510;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=NM058_07510 CP101611.1 Protein Homology CDS 1462977 1464251 . + 0 ID=cds-UTX06370.1;Parent=gene-NM058_07510;Dbxref=NCBI_GP:UTX06370.1;Name=UTX06370.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390701.1;locus_tag=NM058_07510;product=trigger factor;protein_id=UTX06370.1;transl_table=11 CP101611.1 Genbank gene 1464523 1465785 . + . ID=gene-NM058_07515;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=NM058_07515 CP101611.1 Protein Homology CDS 1464523 1465785 . + 0 ID=cds-UTX06371.1;Parent=gene-NM058_07515;Dbxref=NCBI_GP:UTX06371.1;Name=UTX06371.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0051082,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390700.2;locus_tag=NM058_07515;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=UTX06371.1;transl_table=11 CP101611.1 Genbank pseudogene 1465939 1467595 . + . ID=gene-NM058_07520;Name=lonB;gbkey=Gene;gene=lonB;gene_biotype=pseudogene;locus_tag=NM058_07520;pseudo=true CP101611.1 Protein Homology CDS 1465939 1467595 . + 0 ID=cds-NM058_07520;Parent=gene-NM058_07520;Note=frameshifted;Ontology_term=GO:0006508,GO:0030436,GO:0004252,GO:0016887;gbkey=CDS;gene=lonB;go_function=serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390699.1;locus_tag=NM058_07520;product=ATP-dependent protease LonB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1467776 1470100 . + . ID=gene-NM058_07525;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=NM058_07525 CP101611.1 Protein Homology CDS 1467776 1470100 . + 0 ID=cds-UTX06372.1;Parent=gene-NM058_07525;Dbxref=NCBI_GP:UTX06372.1;Name=UTX06372.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0016887;gbkey=CDS;gene=lon;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390698.1;locus_tag=NM058_07525;product=endopeptidase La;protein_id=UTX06372.1;transl_table=11 CP101611.1 Genbank gene 1470097 1470684 . + . ID=gene-NM058_07530;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=NM058_07530 CP101611.1 Protein Homology CDS 1470097 1470684 . + 0 ID=cds-UTX06373.1;Parent=gene-NM058_07530;Dbxref=NCBI_GP:UTX06373.1;Name=UTX06373.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390697.1;locus_tag=NM058_07530;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=UTX06373.1;transl_table=11 CP101611.1 Genbank pseudogene 1470708 1471204 . - . ID=gene-NM058_07535;Name=NM058_07535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07535;pseudo=true CP101611.1 Protein Homology CDS 1470708 1471204 . - 0 ID=cds-NM058_07535;Parent=gene-NM058_07535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390696.2;locus_tag=NM058_07535;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1471436 1472803 . + . ID=gene-NM058_07540;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=NM058_07540 CP101611.1 Protein Homology CDS 1471436 1472803 . + 0 ID=cds-UTX06374.1;Parent=gene-NM058_07540;Dbxref=NCBI_GP:UTX06374.1;Name=UTX06374.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390695.1;locus_tag=NM058_07540;product=glutamyl-tRNA reductase;protein_id=UTX06374.1;transl_table=11 CP101611.1 Genbank pseudogene 1472811 1473639 . + . ID=gene-NM058_07545;Name=NM058_07545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07545;pseudo=true CP101611.1 Protein Homology CDS 1472811 1473639 . + 0 ID=cds-NM058_07545;Parent=gene-NM058_07545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390694.2;locus_tag=NM058_07545;product=cytochrome c biogenesis protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1473676 1474616 . + . ID=gene-NM058_07550;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=pseudogene;locus_tag=NM058_07550;pseudo=true CP101611.1 Protein Homology CDS 1473676 1474616 . + 0 ID=cds-NM058_07550;Parent=gene-NM058_07550;Note=frameshifted;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014477561.1;locus_tag=NM058_07550;product=hydroxymethylbilane synthase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1474606 1475394 . + . ID=gene-NM058_07555;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=NM058_07555 CP101611.1 Protein Homology CDS 1474606 1475394 . + 0 ID=cds-UTX06375.1;Parent=gene-NM058_07555;Dbxref=NCBI_GP:UTX06375.1;Name=UTX06375.1;gbkey=CDS;gene=hemD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390692.1;locus_tag=NM058_07555;product=uroporphyrinogen-III synthase;protein_id=UTX06375.1;transl_table=11 CP101611.1 Genbank pseudogene 1475391 1476364 . + . ID=gene-NM058_07560;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=pseudogene;locus_tag=NM058_07560;pseudo=true CP101611.1 Protein Homology CDS 1475391 1476364 . + 0 ID=cds-NM058_07560;Parent=gene-NM058_07560;Note=frameshifted;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390691.1;locus_tag=NM058_07560;product=porphobilinogen synthase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1476394 1477686 . + . ID=gene-NM058_07565;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=NM058_07565 CP101611.1 Protein Homology CDS 1476394 1477686 . + 0 ID=cds-UTX06376.1;Parent=gene-NM058_07565;Dbxref=NCBI_GP:UTX06376.1;Name=UTX06376.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019715269.1;locus_tag=NM058_07565;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=UTX06376.1;transl_table=11 CP101611.1 Genbank gene 1477819 1479960 . + . ID=gene-NM058_07570;Name=NM058_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07570 CP101611.1 Protein Homology CDS 1477819 1479960 . + 0 ID=cds-UTX06377.1;Parent=gene-NM058_07570;Dbxref=NCBI_GP:UTX06377.1;Name=UTX06377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003222585.1;locus_tag=NM058_07570;product=LysM peptidoglycan-binding domain-containing protein;protein_id=UTX06377.1;transl_table=11 CP101611.1 Genbank gene 1479993 1481018 . + . ID=gene-NM058_07575;Name=ysxE;gbkey=Gene;gene=ysxE;gene_biotype=protein_coding;locus_tag=NM058_07575 CP101611.1 Protein Homology CDS 1479993 1481018 . + 0 ID=cds-UTX06378.1;Parent=gene-NM058_07575;Dbxref=NCBI_GP:UTX06378.1;Name=UTX06378.1;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=ysxE;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390688.1;locus_tag=NM058_07575;product=spore coat protein YsxE;protein_id=UTX06378.1;transl_table=11 CP101611.1 Genbank gene 1481037 1481228 . - . ID=gene-NM058_07580;Name=NM058_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07580 CP101611.1 Protein Homology CDS 1481037 1481228 . - 0 ID=cds-UTX06379.1;Parent=gene-NM058_07580;Dbxref=NCBI_GP:UTX06379.1;Name=UTX06379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097770.1;locus_tag=NM058_07580;product=hypothetical protein;protein_id=UTX06379.1;transl_table=11 CP101611.1 cmsearch binding_site 1481394 1481614 . + . ID=id-CP101611.1:1481394..1481614;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 CP101611.1 Genbank gene 1481673 1484315 . + . ID=gene-NM058_07585;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=NM058_07585 CP101611.1 Protein Homology CDS 1481673 1484315 . + 0 ID=cds-UTX06380.1;Parent=gene-NM058_07585;Dbxref=NCBI_GP:UTX06380.1;Name=UTX06380.1;Ontology_term=GO:0006438,GO:0004832,GO:0005737;gbkey=CDS;gene=valS;go_component=cytoplasm|0005737||IEA;go_function=valine-tRNA ligase activity|0004832||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390687.2;locus_tag=NM058_07585;product=valine--tRNA ligase;protein_id=UTX06380.1;transl_table=11 CP101611.1 Genbank pseudogene 1484375 1485666 . + . ID=gene-NM058_07590;Name=NM058_07590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07590;pseudo=true CP101611.1 Protein Homology CDS 1484375 1485666 . + 0 ID=cds-NM058_07590;Parent=gene-NM058_07590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390686.1;locus_tag=NM058_07590;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1485808 1486551 . + . ID=gene-NM058_07595;Name=NM058_07595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07595;pseudo=true CP101611.1 Protein Homology CDS 1485808 1486551 . + 0 ID=cds-NM058_07595;Parent=gene-NM058_07595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390685.2;locus_tag=NM058_07595;product=A24 family peptidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1486683 1487681 . + . ID=gene-NM058_07600;Name=NM058_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07600 CP101611.1 Protein Homology CDS 1486683 1487681 . + 0 ID=cds-UTX06381.1;Parent=gene-NM058_07600;Dbxref=NCBI_GP:UTX06381.1;Name=UTX06381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390684.1;locus_tag=NM058_07600;product=SPOR domain-containing protein;protein_id=UTX06381.1;transl_table=11 CP101611.1 Genbank gene 1487833 1488402 . + . ID=gene-NM058_07605;Name=NM058_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07605 CP101611.1 Protein Homology CDS 1487833 1488402 . + 0 ID=cds-UTX06382.1;Parent=gene-NM058_07605;Dbxref=NCBI_GP:UTX06382.1;Name=UTX06382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003237578.1;locus_tag=NM058_07605;product=Maf-like protein;protein_id=UTX06382.1;transl_table=11 CP101611.1 Genbank pseudogene 1488439 1488845 . + . ID=gene-NM058_07610;Name=radC;gbkey=Gene;gene=radC;gene_biotype=pseudogene;locus_tag=NM058_07610;pseudo=true CP101611.1 Protein Homology CDS 1488439 1488845 . + 0 ID=cds-NM058_07610;Parent=gene-NM058_07610;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006281;gbkey=CDS;gene=radC;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390682.1;locus_tag=NM058_07610;product=DNA repair protein RadC;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1488858 1490276 . - . ID=gene-NM058_07615;Name=NM058_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07615 CP101611.1 Protein Homology CDS 1488858 1490276 . - 0 ID=cds-UTX06990.1;Parent=gene-NM058_07615;Dbxref=NCBI_GP:UTX06990.1;Name=UTX06990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015968240.1;locus_tag=NM058_07615;product=recombinase family protein;protein_id=UTX06990.1;transl_table=11 CP101611.1 Genbank pseudogene 1490325 1490770 . - . ID=gene-NM058_07620;Name=NM058_07620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07620;pseudo=true CP101611.1 Protein Homology CDS 1490325 1490770 . - 0 ID=cds-NM058_07620;Parent=gene-NM058_07620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015968241.1;locus_tag=NM058_07620;product=ImmA/IrrE family metallo-endopeptidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1490784 1491218 . - . ID=gene-NM058_07625;Name=NM058_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07625 CP101611.1 Protein Homology CDS 1490784 1491218 . - 0 ID=cds-UTX06383.1;Parent=gene-NM058_07625;Dbxref=NCBI_GP:UTX06383.1;Name=UTX06383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015968242.1;locus_tag=NM058_07625;product=helix-turn-helix domain-containing protein;protein_id=UTX06383.1;transl_table=11 CP101611.1 Genbank gene 1491498 1491770 . + . ID=gene-NM058_07630;Name=NM058_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07630 CP101611.1 Protein Homology CDS 1491498 1491770 . + 0 ID=cds-UTX06384.1;Parent=gene-NM058_07630;Dbxref=NCBI_GP:UTX06384.1;Name=UTX06384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017418278.1;locus_tag=NM058_07630;product=helix-turn-helix domain-containing protein;protein_id=UTX06384.1;transl_table=11 CP101611.1 Genbank gene 1491839 1491994 . + . ID=gene-NM058_07635;Name=NM058_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07635 CP101611.1 Protein Homology CDS 1491839 1491994 . + 0 ID=cds-UTX06385.1;Parent=gene-NM058_07635;Dbxref=NCBI_GP:UTX06385.1;Name=UTX06385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697532.1;locus_tag=NM058_07635;product=hypothetical protein;protein_id=UTX06385.1;transl_table=11 CP101611.1 Genbank gene 1491991 1492266 . + . ID=gene-NM058_07640;Name=NM058_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07640 CP101611.1 Protein Homology CDS 1491991 1492266 . + 0 ID=cds-UTX06386.1;Parent=gene-NM058_07640;Dbxref=NCBI_GP:UTX06386.1;Name=UTX06386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019260099.1;locus_tag=NM058_07640;product=hypothetical protein;protein_id=UTX06386.1;transl_table=11 CP101611.1 Genbank gene 1492256 1492393 . + . ID=gene-NM058_07645;Name=NM058_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07645 CP101611.1 Protein Homology CDS 1492256 1492393 . + 0 ID=cds-UTX06387.1;Parent=gene-NM058_07645;Dbxref=NCBI_GP:UTX06387.1;Name=UTX06387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016886654.1;locus_tag=NM058_07645;product=hypothetical protein;protein_id=UTX06387.1;transl_table=11 CP101611.1 Genbank gene 1492460 1493014 . + . ID=gene-NM058_07650;Name=NM058_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07650 CP101611.1 Protein Homology CDS 1492460 1493014 . + 0 ID=cds-UTX06388.1;Parent=gene-NM058_07650;Dbxref=NCBI_GP:UTX06388.1;Name=UTX06388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019260097.1;locus_tag=NM058_07650;product=host-nuclease inhibitor Gam family protein;protein_id=UTX06388.1;transl_table=11 CP101611.1 Genbank gene 1493018 1493956 . + . ID=gene-NM058_07655;Name=NM058_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07655 CP101611.1 Protein Homology CDS 1493018 1493956 . + 0 ID=cds-UTX06389.1;Parent=gene-NM058_07655;Dbxref=NCBI_GP:UTX06389.1;Name=UTX06389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019260096.1;locus_tag=NM058_07655;product=ATP-binding protein;protein_id=UTX06389.1;transl_table=11 CP101611.1 Genbank gene 1493946 1494143 . + . ID=gene-NM058_07660;Name=NM058_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07660 CP101611.1 GeneMarkS-2+ CDS 1493946 1494143 . + 0 ID=cds-UTX06390.1;Parent=gene-NM058_07660;Dbxref=NCBI_GP:UTX06390.1;Name=UTX06390.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_07660;product=hypothetical protein;protein_id=UTX06390.1;transl_table=11 CP101611.1 Genbank gene 1494172 1494612 . + . ID=gene-NM058_07665;Name=NM058_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07665 CP101611.1 Protein Homology CDS 1494172 1494612 . + 0 ID=cds-UTX06391.1;Parent=gene-NM058_07665;Dbxref=NCBI_GP:UTX06391.1;Name=UTX06391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019260094.1;locus_tag=NM058_07665;product=DUF669 domain-containing protein;protein_id=UTX06391.1;transl_table=11 CP101611.1 Genbank pseudogene 1494673 1497089 . + . ID=gene-NM058_07670;Name=NM058_07670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07670;pseudo=true CP101611.1 Protein Homology CDS 1494673 1497089 . + 0 ID=cds-NM058_07670;Parent=gene-NM058_07670;Note=frameshifted;Ontology_term=GO:0006260,GO:0003896;gbkey=CDS;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016886541.1;locus_tag=NM058_07670;product=phage/plasmid primase%2C P4 family;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1497290 1497727 . + . ID=gene-NM058_07675;Name=NM058_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07675 CP101611.1 Protein Homology CDS 1497290 1497727 . + 0 ID=cds-UTX06392.1;Parent=gene-NM058_07675;Dbxref=NCBI_GP:UTX06392.1;Name=UTX06392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015968251.1;locus_tag=NM058_07675;product=hypothetical protein;protein_id=UTX06392.1;transl_table=11 CP101611.1 Genbank pseudogene 1497724 1498262 . + . ID=gene-NM058_07680;Name=NM058_07680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07680;pseudo=true CP101611.1 Protein Homology CDS 1497724 1498262 . + 0 ID=cds-NM058_07680;Parent=gene-NM058_07680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009329253.1;locus_tag=NM058_07680;product=ERCC4 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1498296 1498811 . + . ID=gene-NM058_07685;Name=NM058_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07685 CP101611.1 Protein Homology CDS 1498296 1498811 . + 0 ID=cds-UTX06393.1;Parent=gene-NM058_07685;Dbxref=NCBI_GP:UTX06393.1;Name=UTX06393.1;Ontology_term=GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009330086.1;locus_tag=NM058_07685;product=putative metallopeptidase;protein_id=UTX06393.1;transl_table=11 CP101611.1 Genbank gene 1498983 1499738 . + . ID=gene-NM058_07690;Name=NM058_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07690 CP101611.1 Protein Homology CDS 1498983 1499738 . + 0 ID=cds-UTX06394.1;Parent=gene-NM058_07690;Dbxref=NCBI_GP:UTX06394.1;Name=UTX06394.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017360271.1;locus_tag=NM058_07690;product=DNA cytosine methyltransferase;protein_id=UTX06394.1;transl_table=11 CP101611.1 Genbank gene 1499824 1500237 . + . ID=gene-NM058_07695;Name=NM058_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07695 CP101611.1 Protein Homology CDS 1499824 1500237 . + 0 ID=cds-UTX06395.1;Parent=gene-NM058_07695;Dbxref=NCBI_GP:UTX06395.1;Name=UTX06395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014479863.1;locus_tag=NM058_07695;product=ArpU family transcriptional regulator;protein_id=UTX06395.1;transl_table=11 CP101611.1 Genbank gene 1500674 1501147 . + . ID=gene-NM058_07700;Name=NM058_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07700 CP101611.1 GeneMarkS-2+ CDS 1500674 1501147 . + 0 ID=cds-UTX06396.1;Parent=gene-NM058_07700;Dbxref=NCBI_GP:UTX06396.1;Name=UTX06396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_07700;product=hypothetical protein;protein_id=UTX06396.1;transl_table=11 CP101611.1 Genbank gene 1501229 1501831 . + . ID=gene-NM058_07705;Name=NM058_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07705 CP101611.1 GeneMarkS-2+ CDS 1501229 1501831 . + 0 ID=cds-UTX06397.1;Parent=gene-NM058_07705;Dbxref=NCBI_GP:UTX06397.1;Name=UTX06397.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_07705;product=hypothetical protein;protein_id=UTX06397.1;transl_table=11 CP101611.1 Genbank gene 1501974 1502288 . + . ID=gene-NM058_07710;Name=NM058_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07710 CP101611.1 Protein Homology CDS 1501974 1502288 . + 0 ID=cds-UTX06398.1;Parent=gene-NM058_07710;Dbxref=NCBI_GP:UTX06398.1;Name=UTX06398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015387936.1;locus_tag=NM058_07710;product=hypothetical protein;protein_id=UTX06398.1;transl_table=11 CP101611.1 Genbank gene 1502342 1502686 . + . ID=gene-NM058_07715;Name=NM058_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07715 CP101611.1 Protein Homology CDS 1502342 1502686 . + 0 ID=cds-UTX06399.1;Parent=gene-NM058_07715;Dbxref=NCBI_GP:UTX06399.1;Name=UTX06399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017417283.1;locus_tag=NM058_07715;product=hypothetical protein;protein_id=UTX06399.1;transl_table=11 CP101611.1 Genbank gene 1502676 1503041 . + . ID=gene-NM058_07720;Name=NM058_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07720 CP101611.1 Protein Homology CDS 1502676 1503041 . + 0 ID=cds-UTX06991.1;Parent=gene-NM058_07720;Dbxref=NCBI_GP:UTX06991.1;Name=UTX06991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014418490.1;locus_tag=NM058_07720;product=HNH endonuclease;protein_id=UTX06991.1;transl_table=11 CP101611.1 Genbank pseudogene 1503268 1503782 . + . ID=gene-NM058_07725;Name=NM058_07725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07725;pseudo=true CP101611.1 Protein Homology CDS 1503268 1503782 . + 0 ID=cds-NM058_07725;Parent=gene-NM058_07725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014305148.1;locus_tag=NM058_07725;product=phage terminase small subunit P27 family;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1503779 1505488 . + . ID=gene-NM058_07730;Name=NM058_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07730 CP101611.1 Protein Homology CDS 1503779 1505488 . + 0 ID=cds-UTX06400.1;Parent=gene-NM058_07730;Dbxref=NCBI_GP:UTX06400.1;Name=UTX06400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019260078.1;locus_tag=NM058_07730;product=terminase large subunit;protein_id=UTX06400.1;transl_table=11 CP101611.1 Genbank gene 1505677 1506957 . + . ID=gene-NM058_07735;Name=NM058_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07735 CP101611.1 Protein Homology CDS 1505677 1506957 . + 0 ID=cds-UTX06401.1;Parent=gene-NM058_07735;Dbxref=NCBI_GP:UTX06401.1;Name=UTX06401.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019712669.1;locus_tag=NM058_07735;product=phage portal protein;protein_id=UTX06401.1;transl_table=11 CP101611.1 Genbank gene 1506920 1507546 . + . ID=gene-NM058_07740;Name=NM058_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07740 CP101611.1 Protein Homology CDS 1506920 1507546 . + 0 ID=cds-UTX06402.1;Parent=gene-NM058_07740;Dbxref=NCBI_GP:UTX06402.1;Name=UTX06402.1;Ontology_term=GO:0019068,GO:0005198,GO:0008233,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015387941.1;locus_tag=NM058_07740;product=HK97 family phage prohead protease;protein_id=UTX06402.1;transl_table=11 CP101611.1 Genbank gene 1507585 1508880 . + . ID=gene-NM058_07745;Name=NM058_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07745 CP101611.1 Protein Homology CDS 1507585 1508880 . + 0 ID=cds-UTX06403.1;Parent=gene-NM058_07745;Dbxref=NCBI_GP:UTX06403.1;Name=UTX06403.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019846972.1;locus_tag=NM058_07745;product=phage major capsid protein;protein_id=UTX06403.1;transl_table=11 CP101611.1 Genbank gene 1508904 1509356 . + . ID=gene-NM058_07750;Name=NM058_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07750 CP101611.1 Protein Homology CDS 1508904 1509356 . + 0 ID=cds-UTX06404.1;Parent=gene-NM058_07750;Dbxref=NCBI_GP:UTX06404.1;Name=UTX06404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019712666.1;locus_tag=NM058_07750;product=collagen-like protein;protein_id=UTX06404.1;transl_table=11 CP101611.1 Genbank gene 1509374 1509676 . + . ID=gene-NM058_07755;Name=NM058_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07755 CP101611.1 Protein Homology CDS 1509374 1509676 . + 0 ID=cds-UTX06405.1;Parent=gene-NM058_07755;Dbxref=NCBI_GP:UTX06405.1;Name=UTX06405.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019846973.1;locus_tag=NM058_07755;product=head-tail connector protein;protein_id=UTX06405.1;transl_table=11 CP101611.1 Genbank gene 1509666 1509980 . + . ID=gene-NM058_07760;Name=NM058_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07760 CP101611.1 Protein Homology CDS 1509666 1509980 . + 0 ID=cds-UTX06406.1;Parent=gene-NM058_07760;Dbxref=NCBI_GP:UTX06406.1;Name=UTX06406.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019712664.1;locus_tag=NM058_07760;product=phage head closure protein;protein_id=UTX06406.1;transl_table=11 CP101611.1 Genbank gene 1509980 1510378 . + . ID=gene-NM058_07765;Name=NM058_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07765 CP101611.1 Protein Homology CDS 1509980 1510378 . + 0 ID=cds-UTX06407.1;Parent=gene-NM058_07765;Dbxref=NCBI_GP:UTX06407.1;Name=UTX06407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019846974.1;locus_tag=NM058_07765;product=HK97 gp10 family phage protein;protein_id=UTX06407.1;transl_table=11 CP101611.1 Genbank gene 1510375 1510767 . + . ID=gene-NM058_07770;Name=NM058_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07770 CP101611.1 Protein Homology CDS 1510375 1510767 . + 0 ID=cds-UTX06408.1;Parent=gene-NM058_07770;Dbxref=NCBI_GP:UTX06408.1;Name=UTX06408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019712662.1;locus_tag=NM058_07770;product=hypothetical protein;protein_id=UTX06408.1;transl_table=11 CP101611.1 Genbank gene 1510782 1511396 . + . ID=gene-NM058_07775;Name=NM058_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07775 CP101611.1 Protein Homology CDS 1510782 1511396 . + 0 ID=cds-UTX06409.1;Parent=gene-NM058_07775;Dbxref=NCBI_GP:UTX06409.1;Name=UTX06409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019712661.1;locus_tag=NM058_07775;product=phage tail protein;protein_id=UTX06409.1;transl_table=11 CP101611.1 Genbank gene 1511461 1511838 . + . ID=gene-NM058_07780;Name=NM058_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07780 CP101611.1 Protein Homology CDS 1511461 1511838 . + 0 ID=cds-UTX06410.1;Parent=gene-NM058_07780;Dbxref=NCBI_GP:UTX06410.1;Name=UTX06410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019712660.1;locus_tag=NM058_07780;product=hypothetical protein;protein_id=UTX06410.1;transl_table=11 CP101611.1 Genbank gene 1512038 1516525 . + . ID=gene-NM058_07785;Name=NM058_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07785 CP101611.1 Protein Homology CDS 1512038 1516525 . + 0 ID=cds-UTX06411.1;Parent=gene-NM058_07785;Dbxref=NCBI_GP:UTX06411.1;Name=UTX06411.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019846975.1;locus_tag=NM058_07785;product=phage tail tape measure protein;protein_id=UTX06411.1;transl_table=11 CP101611.1 Genbank gene 1516519 1517358 . + . ID=gene-NM058_07790;Name=NM058_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07790 CP101611.1 Protein Homology CDS 1516519 1517358 . + 0 ID=cds-UTX06412.1;Parent=gene-NM058_07790;Dbxref=NCBI_GP:UTX06412.1;Name=UTX06412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014305132.1;locus_tag=NM058_07790;product=phage tail family protein;protein_id=UTX06412.1;transl_table=11 CP101611.1 Genbank gene 1517373 1519076 . + . ID=gene-NM058_07795;Name=NM058_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07795 CP101611.1 Protein Homology CDS 1517373 1519076 . + 0 ID=cds-UTX06413.1;Parent=gene-NM058_07795;Dbxref=NCBI_GP:UTX06413.1;Name=UTX06413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014305131.1;locus_tag=NM058_07795;product=phage tail protein;protein_id=UTX06413.1;transl_table=11 CP101611.1 Genbank gene 1519128 1521026 . + . ID=gene-NM058_07800;Name=NM058_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07800 CP101611.1 Protein Homology CDS 1519128 1521026 . + 0 ID=cds-UTX06414.1;Parent=gene-NM058_07800;Dbxref=NCBI_GP:UTX06414.1;Name=UTX06414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019260062.1;locus_tag=NM058_07800;product=teichoic acid biosynthesis protein;protein_id=UTX06414.1;transl_table=11 CP101611.1 Genbank gene 1521042 1521350 . + . ID=gene-NM058_07805;Name=NM058_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07805 CP101611.1 Protein Homology CDS 1521042 1521350 . + 0 ID=cds-UTX06415.1;Parent=gene-NM058_07805;Dbxref=NCBI_GP:UTX06415.1;Name=UTX06415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019260061.1;locus_tag=NM058_07805;product=hypothetical protein;protein_id=UTX06415.1;transl_table=11 CP101611.1 Genbank pseudogene 1521532 1522790 . + . ID=gene-NM058_07810;Name=NM058_07810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07810;pseudo=true CP101611.1 Protein Homology CDS 1521532 1522790 . + 0 ID=cds-NM058_07810;Parent=gene-NM058_07810;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019260059.1;locus_tag=NM058_07810;product=BppU family phage baseplate upper protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1523131 1523502 . + . ID=gene-NM058_07815;Name=NM058_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07815 CP101611.1 Protein Homology CDS 1523131 1523502 . + 0 ID=cds-UTX06416.1;Parent=gene-NM058_07815;Dbxref=NCBI_GP:UTX06416.1;Name=UTX06416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003220206.1;locus_tag=NM058_07815;product=hypothetical protein;protein_id=UTX06416.1;transl_table=11 CP101611.1 Genbank gene 1523502 1523675 . + . ID=gene-NM058_07820;Name=NM058_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07820 CP101611.1 Protein Homology CDS 1523502 1523675 . + 0 ID=cds-UTX06417.1;Parent=gene-NM058_07820;Dbxref=NCBI_GP:UTX06417.1;Name=UTX06417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003220205.1;locus_tag=NM058_07820;product=XkdX family protein;protein_id=UTX06417.1;transl_table=11 CP101611.1 Genbank gene 1523727 1523939 . + . ID=gene-NM058_07825;Name=NM058_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07825 CP101611.1 Protein Homology CDS 1523727 1523939 . + 0 ID=cds-UTX06418.1;Parent=gene-NM058_07825;Dbxref=NCBI_GP:UTX06418.1;Name=UTX06418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390025.1;locus_tag=NM058_07825;product=BhlA/UviB family holin-like peptide;protein_id=UTX06418.1;transl_table=11 CP101611.1 Genbank gene 1523954 1524217 . + . ID=gene-NM058_07830;Name=NM058_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07830 CP101611.1 Protein Homology CDS 1523954 1524217 . + 0 ID=cds-UTX06419.1;Parent=gene-NM058_07830;Dbxref=NCBI_GP:UTX06419.1;Name=UTX06419.1;Ontology_term=GO:0034290;gbkey=CDS;go_function=holin activity|0034290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389163.1;locus_tag=NM058_07830;product=phage holin;protein_id=UTX06419.1;transl_table=11 CP101611.1 Genbank gene 1524276 1525253 . + . ID=gene-NM058_07835;Name=NM058_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07835 CP101611.1 Protein Homology CDS 1524276 1525253 . + 0 ID=cds-UTX06420.1;Parent=gene-NM058_07835;Dbxref=NCBI_GP:UTX06420.1;Name=UTX06420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014112421.1;locus_tag=NM058_07835;product=peptidoglycan-binding protein;protein_id=UTX06420.1;transl_table=11 CP101611.1 Genbank gene 1525303 1525761 . - . ID=gene-NM058_07840;Name=NM058_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07840 CP101611.1 Protein Homology CDS 1525303 1525761 . - 0 ID=cds-UTX06421.1;Parent=gene-NM058_07840;Dbxref=NCBI_GP:UTX06421.1;Name=UTX06421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003231326.1;locus_tag=NM058_07840;product=SMI1/KNR4 family protein;protein_id=UTX06421.1;transl_table=11 CP101611.1 Genbank pseudogene 1525776 1527544 . - . ID=gene-NM058_07845;Name=NM058_07845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_07845;pseudo=true CP101611.1 Protein Homology CDS 1525776 1527544 . - 0 ID=cds-NM058_07845;Parent=gene-NM058_07845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013352369.1;locus_tag=NM058_07845;product=T7SS effector LXG polymorphic toxin;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1527892 1529004 . + . ID=gene-NM058_07850;Name=NM058_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07850 CP101611.1 Protein Homology CDS 1527892 1529004 . + 0 ID=cds-UTX06422.1;Parent=gene-NM058_07850;Dbxref=NCBI_GP:UTX06422.1;Name=UTX06422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016938737.1;locus_tag=NM058_07850;product=tetratricopeptide repeat protein;protein_id=UTX06422.1;transl_table=11 CP101611.1 Genbank gene 1529169 1529357 . - . ID=gene-NM058_07855;Name=NM058_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07855 CP101611.1 Protein Homology CDS 1529169 1529357 . - 0 ID=cds-UTX06423.1;Parent=gene-NM058_07855;Dbxref=NCBI_GP:UTX06423.1;Name=UTX06423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697428.1;locus_tag=NM058_07855;product=hypothetical protein;protein_id=UTX06423.1;transl_table=11 CP101611.1 Genbank gene 1529407 1529952 . - . ID=gene-NM058_07860;Name=NM058_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07860 CP101611.1 GeneMarkS-2+ CDS 1529407 1529952 . - 0 ID=cds-UTX06424.1;Parent=gene-NM058_07860;Dbxref=NCBI_GP:UTX06424.1;Name=UTX06424.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_07860;product=hypothetical protein;protein_id=UTX06424.1;transl_table=11 CP101611.1 Genbank gene 1530119 1530334 . - . ID=gene-NM058_07865;Name=NM058_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07865 CP101611.1 GeneMarkS-2+ CDS 1530119 1530334 . - 0 ID=cds-UTX06425.1;Parent=gene-NM058_07865;Dbxref=NCBI_GP:UTX06425.1;Name=UTX06425.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_07865;product=hypothetical protein;protein_id=UTX06425.1;transl_table=11 CP101611.1 Genbank gene 1530356 1530967 . - . ID=gene-NM058_07870;Name=NM058_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07870 CP101611.1 GeneMarkS-2+ CDS 1530356 1530967 . - 0 ID=cds-UTX06426.1;Parent=gene-NM058_07870;Dbxref=NCBI_GP:UTX06426.1;Name=UTX06426.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_07870;product=hypothetical protein;protein_id=UTX06426.1;transl_table=11 CP101611.1 Genbank gene 1531128 1531271 . + . ID=gene-NM058_07875;Name=NM058_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07875 CP101611.1 Protein Homology CDS 1531128 1531271 . + 0 ID=cds-UTX06427.1;Parent=gene-NM058_07875;Dbxref=NCBI_GP:UTX06427.1;Name=UTX06427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017696321.1;locus_tag=NM058_07875;product=hypothetical protein;protein_id=UTX06427.1;transl_table=11 CP101611.1 Genbank gene 1531301 1531543 . + . ID=gene-NM058_07880;Name=NM058_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07880 CP101611.1 Protein Homology CDS 1531301 1531543 . + 0 ID=cds-UTX06428.1;Parent=gene-NM058_07880;Dbxref=NCBI_GP:UTX06428.1;Name=UTX06428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017696322.1;locus_tag=NM058_07880;product=hypothetical protein;protein_id=UTX06428.1;transl_table=11 CP101611.1 Genbank gene 1531521 1531751 . + . ID=gene-NM058_07885;Name=NM058_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07885 CP101611.1 Protein Homology CDS 1531521 1531751 . + 0 ID=cds-UTX06429.1;Parent=gene-NM058_07885;Dbxref=NCBI_GP:UTX06429.1;Name=UTX06429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011198296.1;locus_tag=NM058_07885;product=DNA-binding protein;protein_id=UTX06429.1;transl_table=11 CP101611.1 Genbank pseudogene 1532390 1532695 . + . ID=gene-NM058_07890;Name=radC;gbkey=Gene;gene=radC;gene_biotype=pseudogene;locus_tag=NM058_07890;pseudo=true CP101611.1 Protein Homology CDS 1532390 1532695 . + 0 ID=cds-NM058_07890;Parent=gene-NM058_07890;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006281;gbkey=CDS;gene=radC;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390682.1;locus_tag=NM058_07890;product=DNA repair protein RadC;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1532786 1533799 . + . ID=gene-NM058_07895;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=NM058_07895 CP101611.1 Protein Homology CDS 1532786 1533799 . + 0 ID=cds-UTX06430.1;Parent=gene-NM058_07895;Dbxref=NCBI_GP:UTX06430.1;Name=UTX06430.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390681.2;locus_tag=NM058_07895;product=cell shape-determining protein MreB;protein_id=UTX06430.1;transl_table=11 CP101611.1 Genbank pseudogene 1533830 1534701 . + . ID=gene-NM058_07900;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=pseudogene;locus_tag=NM058_07900;pseudo=true CP101611.1 Protein Homology CDS 1533830 1534701 . + 0 ID=cds-NM058_07900;Parent=gene-NM058_07900;Note=frameshifted;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390680.2;locus_tag=NM058_07900;product=rod shape-determining protein MreC;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1534698 1535216 . + . ID=gene-NM058_07905;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=NM058_07905 CP101611.1 Protein Homology CDS 1534698 1535216 . + 0 ID=cds-UTX06431.1;Parent=gene-NM058_07905;Dbxref=NCBI_GP:UTX06431.1;Name=UTX06431.1;Ontology_term=GO:0008360,GO:0003674;gbkey=CDS;gene=mreD;go_function=molecular_function|0003674||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390679.1;locus_tag=NM058_07905;product=rod shape-determining protein MreD;protein_id=UTX06431.1;transl_table=11 CP101611.1 Genbank gene 1535269 1535949 . + . ID=gene-NM058_07910;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=NM058_07910 CP101611.1 Protein Homology CDS 1535269 1535949 . + 0 ID=cds-UTX06432.1;Parent=gene-NM058_07910;Dbxref=NCBI_GP:UTX06432.1;Name=UTX06432.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390678.1;locus_tag=NM058_07910;product=septum site-determining protein MinC;protein_id=UTX06432.1;transl_table=11 CP101611.1 Genbank gene 1535951 1536757 . + . ID=gene-NM058_07915;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=NM058_07915 CP101611.1 Protein Homology CDS 1535951 1536757 . + 0 ID=cds-UTX06433.1;Parent=gene-NM058_07915;Dbxref=NCBI_GP:UTX06433.1;Name=UTX06433.1;Ontology_term=GO:0000918,GO:0016887;gbkey=CDS;gene=minD;go_function=ATP hydrolysis activity|0016887||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390677.1;locus_tag=NM058_07915;product=septum site-determining protein MinD;protein_id=UTX06433.1;transl_table=11 CP101611.1 Genbank gene 1536898 1537692 . + . ID=gene-NM058_07920;Name=spoIVFA;gbkey=Gene;gene=spoIVFA;gene_biotype=protein_coding;locus_tag=NM058_07920 CP101611.1 Protein Homology CDS 1536898 1537692 . + 0 ID=cds-UTX06434.1;Parent=gene-NM058_07920;Dbxref=NCBI_GP:UTX06434.1;Name=UTX06434.1;gbkey=CDS;gene=spoIVFA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390676.1;locus_tag=NM058_07920;product=stage IV sporulation protein SpoIVFA;protein_id=UTX06434.1;transl_table=11 CP101611.1 Genbank pseudogene 1537685 1538547 . + . ID=gene-NM058_07925;Name=spoIVFB;gbkey=Gene;gene=spoIVFB;gene_biotype=pseudogene;locus_tag=NM058_07925;pseudo=true CP101611.1 Protein Homology CDS 1537685 1538547 . + 0 ID=cds-NM058_07925;Parent=gene-NM058_07925;Note=frameshifted;gbkey=CDS;gene=spoIVFB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390675.1;locus_tag=NM058_07925;product=stage IV sporulation intramembrane metalloprotease SpoIVFB;pseudo=true;transl_table=11 CP101611.1 cmsearch sequence_feature 1538605 1538680 . + . ID=id-CP101611.1:1538605..1538680;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP101611.1 Genbank gene 1538694 1539002 . + . ID=gene-NM058_07930;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=NM058_07930 CP101611.1 Protein Homology CDS 1538694 1539002 . + 0 ID=cds-UTX06435.1;Parent=gene-NM058_07930;Dbxref=NCBI_GP:UTX06435.1;Name=UTX06435.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390674.1;locus_tag=NM058_07930;product=50S ribosomal protein L21;protein_id=UTX06435.1;transl_table=11 CP101611.1 Genbank gene 1539005 1539343 . + . ID=gene-NM058_07935;Name=NM058_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07935 CP101611.1 Protein Homology CDS 1539005 1539343 . + 0 ID=cds-UTX06436.1;Parent=gene-NM058_07935;Dbxref=NCBI_GP:UTX06436.1;Name=UTX06436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390673.2;locus_tag=NM058_07935;product=ribosomal-processing cysteine protease Prp;protein_id=UTX06436.1;transl_table=11 CP101611.1 Genbank gene 1539356 1539640 . + . ID=gene-NM058_07940;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=NM058_07940 CP101611.1 Protein Homology CDS 1539356 1539640 . + 0 ID=cds-UTX06437.1;Parent=gene-NM058_07940;Dbxref=NCBI_GP:UTX06437.1;Name=UTX06437.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390672.1;locus_tag=NM058_07940;product=50S ribosomal protein L27;protein_id=UTX06437.1;transl_table=11 CP101611.1 Genbank gene 1539761 1539883 . - . ID=gene-NM058_07945;Name=NM058_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07945 CP101611.1 Protein Homology CDS 1539761 1539883 . - 0 ID=cds-UTX06438.1;Parent=gene-NM058_07945;Dbxref=NCBI_GP:UTX06438.1;Name=UTX06438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513993.1;locus_tag=NM058_07945;product=hypothetical protein;protein_id=UTX06438.1;transl_table=11 CP101611.1 Genbank gene 1539961 1540539 . + . ID=gene-NM058_07950;Name=spo0B;gbkey=Gene;gene=spo0B;gene_biotype=protein_coding;locus_tag=NM058_07950 CP101611.1 Protein Homology CDS 1539961 1540539 . + 0 ID=cds-UTX06439.1;Parent=gene-NM058_07950;Dbxref=NCBI_GP:UTX06439.1;Name=UTX06439.1;gbkey=CDS;gene=spo0B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390671.1;locus_tag=NM058_07950;product=sporulation initiation phosphotransferase Sop0B;protein_id=UTX06439.1;transl_table=11 CP101611.1 Genbank gene 1540573 1541859 . + . ID=gene-NM058_07955;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=NM058_07955 CP101611.1 Protein Homology CDS 1540573 1541859 . + 0 ID=cds-UTX06440.1;Parent=gene-NM058_07955;Dbxref=NCBI_GP:UTX06440.1;Name=UTX06440.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390670.1;locus_tag=NM058_07955;product=GTPase ObgE;protein_id=UTX06440.1;transl_table=11 CP101611.1 Genbank gene 1541917 1542360 . + . ID=gene-NM058_07960;Name=thrR;gbkey=Gene;gene=thrR;gene_biotype=protein_coding;locus_tag=NM058_07960 CP101611.1 Protein Homology CDS 1541917 1542360 . + 0 ID=cds-UTX06441.1;Parent=gene-NM058_07960;Dbxref=NCBI_GP:UTX06441.1;Name=UTX06441.1;gbkey=CDS;gene=thrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390669.1;locus_tag=NM058_07960;product=transcriptional regulator ThrR;protein_id=UTX06441.1;transl_table=11 CP101611.1 Genbank gene 1542377 1543231 . + . ID=gene-NM058_07965;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=NM058_07965 CP101611.1 Protein Homology CDS 1542377 1543231 . + 0 ID=cds-UTX06442.1;Parent=gene-NM058_07965;Dbxref=NCBI_GP:UTX06442.1;Name=UTX06442.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390668.1;locus_tag=NM058_07965;product=prephenate dehydratase;protein_id=UTX06442.1;transl_table=11 CP101611.1 Genbank gene 1543256 1543798 . - . ID=gene-NM058_07970;Name=NM058_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07970 CP101611.1 Protein Homology CDS 1543256 1543798 . - 0 ID=cds-UTX06443.1;Parent=gene-NM058_07970;Dbxref=NCBI_GP:UTX06443.1;Name=UTX06443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390667.2;locus_tag=NM058_07970;product=transcription repressor NadR;protein_id=UTX06443.1;transl_table=11 CP101611.1 Genbank gene 1543758 1544945 . - . ID=gene-NM058_07975;Name=NM058_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_07975 CP101611.1 Protein Homology CDS 1543758 1544945 . - 0 ID=cds-UTX06444.1;Parent=gene-NM058_07975;Dbxref=NCBI_GP:UTX06444.1;Name=UTX06444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390666.1;locus_tag=NM058_07975;product=IscS subfamily cysteine desulfurase;protein_id=UTX06444.1;transl_table=11 CP101611.1 Genbank pseudogene 1545047 1546641 . + . ID=gene-NM058_07980;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=pseudogene;locus_tag=NM058_07980;pseudo=true CP101611.1 Protein Homology CDS 1545047 1546641 . + 0 ID=cds-NM058_07980;Parent=gene-NM058_07980;Note=frameshifted;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390665.1;locus_tag=NM058_07980;product=L-aspartate oxidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1546595 1547464 . + . ID=gene-NM058_07985;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=NM058_07985 CP101611.1 Protein Homology CDS 1546595 1547464 . + 0 ID=cds-UTX06445.1;Parent=gene-NM058_07985;Dbxref=NCBI_GP:UTX06445.1;Name=UTX06445.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390664.1;locus_tag=NM058_07985;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=UTX06445.1;transl_table=11 CP101611.1 Genbank gene 1547451 1548557 . + . ID=gene-NM058_07990;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=NM058_07990 CP101611.1 Protein Homology CDS 1547451 1548557 . + 0 ID=cds-UTX06446.1;Parent=gene-NM058_07990;Dbxref=NCBI_GP:UTX06446.1;Name=UTX06446.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390663.1;locus_tag=NM058_07990;product=quinolinate synthase NadA;protein_id=UTX06446.1;transl_table=11 CP101611.1 Genbank pseudogene 1548673 1549853 . + . ID=gene-NM058_07995;Name=safA;gbkey=Gene;gene=safA;gene_biotype=pseudogene;locus_tag=NM058_07995;pseudo=true CP101611.1 Protein Homology CDS 1548673 1549853 . + 0 ID=cds-NM058_07995;Parent=gene-NM058_07995;Note=frameshifted;gbkey=CDS;gene=safA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390662.1;locus_tag=NM058_07995;product=spore coat assembly protein SafA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1549992 1550591 . + . ID=gene-NM058_08000;Name=NM058_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08000 CP101611.1 Protein Homology CDS 1549992 1550591 . + 0 ID=cds-UTX06447.1;Parent=gene-NM058_08000;Dbxref=NCBI_GP:UTX06447.1;Name=UTX06447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390661.2;locus_tag=NM058_08000;product=YhcN/YlaJ family sporulation lipoprotein;protein_id=UTX06447.1;transl_table=11 CP101611.1 Genbank pseudogene 1550694 1551415 . + . ID=gene-NM058_08005;Name=NM058_08005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08005;pseudo=true CP101611.1 Protein Homology CDS 1550694 1551415 . + 0 ID=cds-NM058_08005;Parent=gene-NM058_08005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259060.1;locus_tag=NM058_08005;product=YebC/PmpR family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1551456 1552910 . - . ID=gene-NM058_08010;Name=NM058_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08010 CP101611.1 Protein Homology CDS 1551456 1552910 . - 0 ID=cds-UTX06448.1;Parent=gene-NM058_08010;Dbxref=NCBI_GP:UTX06448.1;Name=UTX06448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390659.2;locus_tag=NM058_08010;product=alanine:cation symporter family protein;protein_id=UTX06448.1;transl_table=11 CP101611.1 Genbank pseudogene 1553072 1553199 . - . ID=gene-NM058_08015;Name=NM058_08015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08015;pseudo=true CP101611.1 Protein Homology CDS 1553072 1553199 . - 0 ID=cds-NM058_08015;Parent=gene-NM058_08015;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003229704.1;locus_tag=NM058_08015;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1553204 1553380 . - . ID=gene-NM058_08020;Name=NM058_08020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08020;pseudo=true CP101611.1 Protein Homology CDS 1553204 1553380 . - 0 ID=cds-NM058_08020;Parent=gene-NM058_08020;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010335142.1;locus_tag=NM058_08020;product=DUF5412 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1553581 1553703 . + . ID=gene-NM058_08025;Name=NM058_08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08025 CP101611.1 Protein Homology CDS 1553581 1553703 . + 0 ID=cds-UTX06449.1;Parent=gene-NM058_08025;Dbxref=NCBI_GP:UTX06449.1;Name=UTX06449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513992.1;locus_tag=NM058_08025;product=hypothetical protein;protein_id=UTX06449.1;transl_table=11 CP101611.1 Genbank gene 1553749 1554396 . - . ID=gene-NM058_08030;Name=NM058_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08030 CP101611.1 Protein Homology CDS 1553749 1554396 . - 0 ID=cds-UTX06450.1;Parent=gene-NM058_08030;Dbxref=NCBI_GP:UTX06450.1;Name=UTX06450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390656.2;locus_tag=NM058_08030;product=serine/threonine protein kinase;protein_id=UTX06450.1;transl_table=11 CP101611.1 Genbank gene 1554633 1555658 . + . ID=gene-NM058_08035;Name=iolG;gbkey=Gene;gene=iolG;gene_biotype=protein_coding;locus_tag=NM058_08035 CP101611.1 Protein Homology CDS 1554633 1555658 . + 0 ID=cds-UTX06451.1;Parent=gene-NM058_08035;Dbxref=NCBI_GP:UTX06451.1;Name=UTX06451.1;Ontology_term=GO:0019310,GO:0050112;gbkey=CDS;gene=iolG;go_function=inositol 2-dehydrogenase activity|0050112||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390655.1;locus_tag=NM058_08035;product=inositol 2-dehydrogenase;protein_id=UTX06451.1;transl_table=11 CP101611.1 Genbank gene 1555729 1557036 . + . ID=gene-NM058_08040;Name=NM058_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08040 CP101611.1 Protein Homology CDS 1555729 1557036 . + 0 ID=cds-UTX06452.1;Parent=gene-NM058_08040;Dbxref=NCBI_GP:UTX06452.1;Name=UTX06452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390654.2;locus_tag=NM058_08040;product=MFS transporter;protein_id=UTX06452.1;transl_table=11 CP101611.1 Genbank pseudogene 1557084 1557595 . + . ID=gene-NM058_08045;Name=bofC;gbkey=Gene;gene=bofC;gene_biotype=pseudogene;locus_tag=NM058_08045;pseudo=true CP101611.1 Protein Homology CDS 1557084 1557595 . + 0 ID=cds-NM058_08045;Parent=gene-NM058_08045;Note=frameshifted;gbkey=CDS;gene=bofC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390653.1;locus_tag=NM058_08045;product=sporulation cell-cell signaling protein BofC;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1557734 1558339 . + . ID=gene-NM058_08050;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=NM058_08050 CP101611.1 Protein Homology CDS 1557734 1558339 . + 0 ID=cds-UTX06453.1;Parent=gene-NM058_08050;Dbxref=NCBI_GP:UTX06453.1;Name=UTX06453.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390652.1;locus_tag=NM058_08050;product=Holliday junction branch migration protein RuvA;protein_id=UTX06453.1;transl_table=11 CP101611.1 Genbank gene 1558350 1559354 . + . ID=gene-NM058_08055;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=NM058_08055 CP101611.1 Protein Homology CDS 1558350 1559354 . + 0 ID=cds-UTX06454.1;Parent=gene-NM058_08055;Dbxref=NCBI_GP:UTX06454.1;Name=UTX06454.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054590.1;locus_tag=NM058_08055;product=Holliday junction branch migration DNA helicase RuvB;protein_id=UTX06454.1;transl_table=11 CP101611.1 Genbank gene 1559347 1559547 . + . ID=gene-NM058_08060;Name=NM058_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08060 CP101611.1 Protein Homology CDS 1559347 1559547 . + 0 ID=cds-UTX06455.1;Parent=gene-NM058_08060;Dbxref=NCBI_GP:UTX06455.1;Name=UTX06455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097768.1;locus_tag=NM058_08060;product=DUF2905 domain-containing protein;protein_id=UTX06455.1;transl_table=11 CP101611.1 Genbank gene 1559577 1560605 . + . ID=gene-NM058_08065;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=NM058_08065 CP101611.1 Protein Homology CDS 1559577 1560605 . + 0 ID=cds-UTX06456.1;Parent=gene-NM058_08065;Dbxref=NCBI_GP:UTX06456.1;Name=UTX06456.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390650.1;locus_tag=NM058_08065;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=UTX06456.1;transl_table=11 CP101611.1 Genbank pseudogene 1560633 1561779 . + . ID=gene-NM058_08070;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=pseudogene;locus_tag=NM058_08070;pseudo=true CP101611.1 Protein Homology CDS 1560633 1561779 . + 0 ID=cds-NM058_08070;Parent=gene-NM058_08070;Note=frameshifted;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390649.1;locus_tag=NM058_08070;product=tRNA guanosine(34) transglycosylase Tgt;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1561820 1562086 . + . ID=gene-NM058_08075;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=NM058_08075 CP101611.1 Protein Homology CDS 1561820 1562086 . + 0 ID=cds-UTX06457.1;Parent=gene-NM058_08075;Dbxref=NCBI_GP:UTX06457.1;Name=UTX06457.1;Ontology_term=GO:0009306,GO:0015450,GO:0005887;gbkey=CDS;gene=yajC;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390648.2;locus_tag=NM058_08075;product=preprotein translocase subunit YajC;protein_id=UTX06457.1;transl_table=11 CP101611.1 Genbank pseudogene 1562268 1562656 . - . ID=gene-NM058_08080;Name=NM058_08080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08080;pseudo=true CP101611.1 Protein Homology CDS 1562268 1562656 . - 0 ID=cds-NM058_08080;Parent=gene-NM058_08080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015483510.1;locus_tag=NM058_08080;product=TIGR04086 family membrane protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1562854 1563510 . + . ID=gene-NM058_08085;Name=NM058_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08085 CP101611.1 Protein Homology CDS 1562854 1563510 . + 0 ID=cds-UTX06992.1;Parent=gene-NM058_08085;Dbxref=NCBI_GP:UTX06992.1;Name=UTX06992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390646.1;locus_tag=NM058_08085;product=DUF421 domain-containing protein;protein_id=UTX06992.1;transl_table=11 CP101611.1 Genbank gene 1563514 1565070 . - . ID=gene-NM058_08090;Name=spoVB;gbkey=Gene;gene=spoVB;gene_biotype=protein_coding;locus_tag=NM058_08090 CP101611.1 Protein Homology CDS 1563514 1565070 . - 0 ID=cds-UTX06458.1;Parent=gene-NM058_08090;Dbxref=NCBI_GP:UTX06458.1;Name=UTX06458.1;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=spoVB;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390645.1;locus_tag=NM058_08090;product=stage V sporulation protein B;protein_id=UTX06458.1;transl_table=11 CP101611.1 Genbank gene 1565185 1565481 . + . ID=gene-NM058_08095;Name=comN;gbkey=Gene;gene=comN;gene_biotype=protein_coding;locus_tag=NM058_08095 CP101611.1 Protein Homology CDS 1565185 1565481 . + 0 ID=cds-UTX06459.1;Parent=gene-NM058_08095;Dbxref=NCBI_GP:UTX06459.1;Name=UTX06459.1;gbkey=CDS;gene=comN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390644.1;locus_tag=NM058_08095;product=post-transcriptional regulator ComN;protein_id=UTX06459.1;transl_table=11 CP101611.1 Genbank gene 1565520 1567733 . + . ID=gene-NM058_08100;Name=secDF;gbkey=Gene;gene=secDF;gene_biotype=protein_coding;locus_tag=NM058_08100 CP101611.1 Protein Homology CDS 1565520 1567733 . + 0 ID=cds-UTX06460.1;Parent=gene-NM058_08100;Dbxref=NCBI_GP:UTX06460.1;Name=UTX06460.1;Ontology_term=GO:0006886,GO:0015450;gbkey=CDS;gene=secDF;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390643.1;locus_tag=NM058_08100;product=protein translocase subunit SecDF;protein_id=UTX06460.1;transl_table=11 CP101611.1 Genbank gene 1567888 1568385 . + . ID=gene-NM058_08105;Name=NM058_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08105 CP101611.1 Protein Homology CDS 1567888 1568385 . + 0 ID=cds-UTX06461.1;Parent=gene-NM058_08105;Dbxref=NCBI_GP:UTX06461.1;Name=UTX06461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390642.1;locus_tag=NM058_08105;product=cation:proton antiporter regulatory subunit;protein_id=UTX06461.1;transl_table=11 CP101611.1 Genbank gene 1568462 1568785 . + . ID=gene-NM058_08110;Name=NM058_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08110 CP101611.1 Protein Homology CDS 1568462 1568785 . + 0 ID=cds-UTX06462.1;Parent=gene-NM058_08110;Dbxref=NCBI_GP:UTX06462.1;Name=UTX06462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390641.1;locus_tag=NM058_08110;product=DUF1049 domain-containing protein;protein_id=UTX06462.1;transl_table=11 CP101611.1 Genbank pseudogene 1568852 1571211 . + . ID=gene-NM058_08115;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=pseudogene;locus_tag=NM058_08115;pseudo=true CP101611.1 Protein Homology CDS 1568852 1571211 . + 0 ID=cds-NM058_08115;Parent=gene-NM058_08115;Note=frameshifted;Ontology_term=GO:0006310,GO:0008297;gbkey=CDS;gene=recJ;go_function=single-stranded DNA exodeoxyribonuclease activity|0008297||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390640.1;locus_tag=NM058_08115;product=single-stranded-DNA-specific exonuclease RecJ;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1571217 1571729 . + . ID=gene-NM058_08120;Name=NM058_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08120 CP101611.1 Protein Homology CDS 1571217 1571729 . + 0 ID=cds-UTX06463.1;Parent=gene-NM058_08120;Dbxref=NCBI_GP:UTX06463.1;Name=UTX06463.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390639.1;locus_tag=NM058_08120;product=adenine phosphoribosyltransferase;protein_id=UTX06463.1;transl_table=11 CP101611.1 Genbank gene 1571899 1573818 . + . ID=gene-NM058_08125;Name=NM058_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08125 CP101611.1 Protein Homology CDS 1571899 1573818 . + 0 ID=cds-UTX06464.1;Parent=gene-NM058_08125;Dbxref=NCBI_GP:UTX06464.1;Name=UTX06464.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00691.1;locus_tag=NM058_08125;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=UTX06464.1;transl_table=11 CP101611.1 Genbank gene 1573908 1574102 . + . ID=gene-NM058_08130;Name=NM058_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08130 CP101611.1 Protein Homology CDS 1573908 1574102 . + 0 ID=cds-UTX06465.1;Parent=gene-NM058_08130;Dbxref=NCBI_GP:UTX06465.1;Name=UTX06465.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024687.2;locus_tag=NM058_08130;product=hypothetical protein;protein_id=UTX06465.1;transl_table=11 CP101611.1 Genbank gene 1574115 1574555 . + . ID=gene-NM058_08135;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=NM058_08135 CP101611.1 Protein Homology CDS 1574115 1574555 . + 0 ID=cds-UTX06466.1;Parent=gene-NM058_08135;Dbxref=NCBI_GP:UTX06466.1;Name=UTX06466.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266954.1;locus_tag=NM058_08135;product=D-aminoacyl-tRNA deacylase;protein_id=UTX06466.1;transl_table=11 CP101611.1 Genbank gene 1574579 1576132 . - . ID=gene-NM058_08140;Name=NM058_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08140 CP101611.1 Protein Homology CDS 1574579 1576132 . - 0 ID=cds-UTX06467.1;Parent=gene-NM058_08140;Dbxref=NCBI_GP:UTX06467.1;Name=UTX06467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390636.1;locus_tag=NM058_08140;product=SH3 domain-containing protein;protein_id=UTX06467.1;transl_table=11 CP101611.1 Genbank gene 1576263 1576433 . + . ID=gene-NM058_08145;Name=NM058_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08145 CP101611.1 Protein Homology CDS 1576263 1576433 . + 0 ID=cds-UTX06468.1;Parent=gene-NM058_08145;Dbxref=NCBI_GP:UTX06468.1;Name=UTX06468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390635.1;locus_tag=NM058_08145;product=YrzK family protein;protein_id=UTX06468.1;transl_table=11 CP101611.1 cmsearch binding_site 1576493 1576723 . + . ID=id-CP101611.1:1576493..1576723;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 CP101611.1 Genbank gene 1576814 1578088 . + . ID=gene-NM058_08150;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=NM058_08150 CP101611.1 Protein Homology CDS 1576814 1578088 . + 0 ID=cds-UTX06469.1;Parent=gene-NM058_08150;Dbxref=NCBI_GP:UTX06469.1;Name=UTX06469.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390634.1;locus_tag=NM058_08150;product=histidine--tRNA ligase;protein_id=UTX06469.1;transl_table=11 CP101611.1 Genbank pseudogene 1578102 1579878 . + . ID=gene-NM058_08155;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=pseudogene;locus_tag=NM058_08155;pseudo=true CP101611.1 Protein Homology CDS 1578102 1579878 . + 0 ID=cds-NM058_08155;Parent=gene-NM058_08155;Note=frameshifted;Ontology_term=GO:0006422,GO:0004815,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390633.1;locus_tag=NM058_08155;product=aspartate--tRNA ligase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1579939 1580131 . + . ID=gene-NM058_08160;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=NM058_08160 CP101611.1 cmsearch ncRNA 1579939 1580131 . + . ID=rna-NM058_08160;Parent=gene-NM058_08160;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_08160;product=6S RNA CP101611.1 cmsearch exon 1579939 1580131 . + . ID=exon-NM058_08160-1;Parent=rna-NM058_08160;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_08160;product=6S RNA CP101611.1 Genbank gene 1580215 1580979 . + . ID=gene-NM058_08165;Name=NM058_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08165 CP101611.1 Protein Homology CDS 1580215 1580979 . + 0 ID=cds-UTX06470.1;Parent=gene-NM058_08165;Dbxref=NCBI_GP:UTX06470.1;Name=UTX06470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390632.3;locus_tag=NM058_08165;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=UTX06470.1;transl_table=11 CP101611.1 Genbank gene 1581021 1582286 . - . ID=gene-NM058_08170;Name=NM058_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08170 CP101611.1 Protein Homology CDS 1581021 1582286 . - 0 ID=cds-UTX06993.1;Parent=gene-NM058_08170;Dbxref=NCBI_GP:UTX06993.1;Name=UTX06993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390631.1;locus_tag=NM058_08170;product=replication-associated recombination protein A;protein_id=UTX06993.1;transl_table=11 CP101611.1 Genbank gene 1582488 1582904 . + . ID=gene-NM058_08175;Name=cymR;gbkey=Gene;gene=cymR;gene_biotype=protein_coding;locus_tag=NM058_08175 CP101611.1 Protein Homology CDS 1582488 1582904 . + 0 ID=cds-UTX06994.1;Parent=gene-NM058_08175;Dbxref=NCBI_GP:UTX06994.1;Name=UTX06994.1;gbkey=CDS;gene=cymR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390630.2;locus_tag=NM058_08175;product=cysteine metabolism transcriptional regulator CymR;protein_id=UTX06994.1;transl_table=11 CP101611.1 Genbank gene 1582923 1584065 . + . ID=gene-NM058_08180;Name=NM058_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08180 CP101611.1 Protein Homology CDS 1582923 1584065 . + 0 ID=cds-UTX06471.1;Parent=gene-NM058_08180;Dbxref=NCBI_GP:UTX06471.1;Name=UTX06471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015483503.1;locus_tag=NM058_08180;product=cysteine desulfurase;protein_id=UTX06471.1;transl_table=11 CP101611.1 Genbank gene 1584093 1585208 . + . ID=gene-NM058_08185;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=NM058_08185 CP101611.1 Protein Homology CDS 1584093 1585208 . + 0 ID=cds-UTX06472.1;Parent=gene-NM058_08185;Dbxref=NCBI_GP:UTX06472.1;Name=UTX06472.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390627.3;locus_tag=NM058_08185;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=UTX06472.1;transl_table=11 CP101611.1 Genbank gene 1585294 1585914 . + . ID=gene-NM058_08190;Name=NM058_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08190 CP101611.1 Protein Homology CDS 1585294 1585914 . + 0 ID=cds-UTX06995.1;Parent=gene-NM058_08190;Dbxref=NCBI_GP:UTX06995.1;Name=UTX06995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390626.1;locus_tag=NM058_08190;product=tetratricopeptide repeat protein;protein_id=UTX06995.1;transl_table=11 CP101611.1 Genbank gene 1585939 1588335 . + . ID=gene-NM058_08195;Name=NM058_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08195 CP101611.1 Protein Homology CDS 1585939 1588335 . + 0 ID=cds-UTX06473.1;Parent=gene-NM058_08195;Dbxref=NCBI_GP:UTX06473.1;Name=UTX06473.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010330995.1;locus_tag=NM058_08195;product=ATP-dependent RecD-like DNA helicase;protein_id=UTX06473.1;transl_table=11 CP101611.1 Genbank gene 1588392 1588916 . + . ID=gene-NM058_08200;Name=NM058_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08200 CP101611.1 Protein Homology CDS 1588392 1588916 . + 0 ID=cds-UTX06474.1;Parent=gene-NM058_08200;Dbxref=NCBI_GP:UTX06474.1;Name=UTX06474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390624.1;locus_tag=NM058_08200;product=PRC-barrel domain-containing protein;protein_id=UTX06474.1;transl_table=11 CP101611.1 Genbank gene 1588928 1589119 . + . ID=gene-NM058_08205;Name=NM058_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08205 CP101611.1 Protein Homology CDS 1588928 1589119 . + 0 ID=cds-UTX06475.1;Parent=gene-NM058_08205;Dbxref=NCBI_GP:UTX06475.1;Name=UTX06475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097767.1;locus_tag=NM058_08205;product=hypothetical protein;protein_id=UTX06475.1;transl_table=11 CP101611.1 Genbank gene 1589141 1589272 . + . ID=gene-NM058_08210;Name=NM058_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08210 CP101611.1 Protein Homology CDS 1589141 1589272 . + 0 ID=cds-UTX06476.1;Parent=gene-NM058_08210;Dbxref=NCBI_GP:UTX06476.1;Name=UTX06476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097766.1;locus_tag=NM058_08210;product=YrzQ family protein;protein_id=UTX06476.1;transl_table=11 CP101611.1 Genbank gene 1589308 1589964 . - . ID=gene-NM058_08215;Name=NM058_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08215 CP101611.1 Protein Homology CDS 1589308 1589964 . - 0 ID=cds-UTX06477.1;Parent=gene-NM058_08215;Dbxref=NCBI_GP:UTX06477.1;Name=UTX06477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390623.1;locus_tag=NM058_08215;product=amino acid ABC transporter permease;protein_id=UTX06477.1;transl_table=11 CP101611.1 Genbank gene 1589981 1590631 . - . ID=gene-NM058_08220;Name=NM058_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08220 CP101611.1 Protein Homology CDS 1589981 1590631 . - 0 ID=cds-UTX06478.1;Parent=gene-NM058_08220;Dbxref=NCBI_GP:UTX06478.1;Name=UTX06478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390622.1;locus_tag=NM058_08220;product=amino acid ABC transporter permease;protein_id=UTX06478.1;transl_table=11 CP101611.1 Genbank pseudogene 1590692 1591510 . - . ID=gene-NM058_08225;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=pseudogene;locus_tag=NM058_08225;pseudo=true CP101611.1 Protein Homology CDS 1590692 1591510 . - 0 ID=cds-NM058_08225;Parent=gene-NM058_08225;Note=frameshifted;gbkey=CDS;gene=glnH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390621.1;locus_tag=NM058_08225;product=glutamine ABC transporter substrate-binding protein GlnH;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1591532 1592260 . - . ID=gene-NM058_08230;Name=NM058_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08230 CP101611.1 Protein Homology CDS 1591532 1592260 . - 0 ID=cds-UTX06479.1;Parent=gene-NM058_08230;Dbxref=NCBI_GP:UTX06479.1;Name=UTX06479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390620.1;locus_tag=NM058_08230;product=amino acid ABC transporter ATP-binding protein;protein_id=UTX06479.1;transl_table=11 CP101611.1 Genbank pseudogene 1592470 1593530 . + . ID=gene-NM058_08235;Name=NM058_08235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08235;pseudo=true CP101611.1 Protein Homology CDS 1592470 1593530 . + 0 ID=cds-NM058_08235;Parent=gene-NM058_08235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390619.1;locus_tag=NM058_08235;product=AI-2E family transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1593864 1596500 . + . ID=gene-NM058_08240;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=NM058_08240 CP101611.1 Protein Homology CDS 1593864 1596500 . + 0 ID=cds-UTX06480.1;Parent=gene-NM058_08240;Dbxref=NCBI_GP:UTX06480.1;Name=UTX06480.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390618.1;locus_tag=NM058_08240;product=alanine--tRNA ligase;protein_id=UTX06480.1;transl_table=11 CP101611.1 Genbank gene 1596585 1596851 . + . ID=gene-NM058_08245;Name=NM058_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08245 CP101611.1 Protein Homology CDS 1596585 1596851 . + 0 ID=cds-UTX06481.1;Parent=gene-NM058_08245;Dbxref=NCBI_GP:UTX06481.1;Name=UTX06481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054589.1;locus_tag=NM058_08245;product=IreB family regulatory phosphoprotein;protein_id=UTX06481.1;transl_table=11 CP101611.1 Genbank gene 1596859 1597275 . + . ID=gene-NM058_08250;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=NM058_08250 CP101611.1 Protein Homology CDS 1596859 1597275 . + 0 ID=cds-UTX06482.1;Parent=gene-NM058_08250;Dbxref=NCBI_GP:UTX06482.1;Name=UTX06482.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390617.1;locus_tag=NM058_08250;product=Holliday junction resolvase RuvX;protein_id=UTX06482.1;transl_table=11 CP101611.1 Genbank gene 1597293 1597574 . + . ID=gene-NM058_08255;Name=NM058_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08255 CP101611.1 Protein Homology CDS 1597293 1597574 . + 0 ID=cds-UTX06483.1;Parent=gene-NM058_08255;Dbxref=NCBI_GP:UTX06483.1;Name=UTX06483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390616.1;locus_tag=NM058_08255;product=DUF1292 domain-containing protein;protein_id=UTX06483.1;transl_table=11 CP101611.1 Genbank gene 1597711 1598793 . + . ID=gene-NM058_08260;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=NM058_08260 CP101611.1 Protein Homology CDS 1597711 1598793 . + 0 ID=cds-UTX06484.1;Parent=gene-NM058_08260;Dbxref=NCBI_GP:UTX06484.1;Name=UTX06484.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390615.1;locus_tag=NM058_08260;product=endolytic transglycosylase MltG;protein_id=UTX06484.1;transl_table=11 CP101611.1 Genbank gene 1598944 1599597 . + . ID=gene-NM058_08265;Name=NM058_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08265 CP101611.1 Protein Homology CDS 1598944 1599597 . + 0 ID=cds-UTX06485.1;Parent=gene-NM058_08265;Dbxref=NCBI_GP:UTX06485.1;Name=UTX06485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390614.1;locus_tag=NM058_08265;product=O-methyltransferase;protein_id=UTX06485.1;transl_table=11 CP101611.1 Genbank gene 1599603 1600532 . + . ID=gene-NM058_08270;Name=NM058_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08270 CP101611.1 Protein Homology CDS 1599603 1600532 . + 0 ID=cds-UTX06486.1;Parent=gene-NM058_08270;Dbxref=NCBI_GP:UTX06486.1;Name=UTX06486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390613.1;locus_tag=NM058_08270;product=U32 family peptidase;protein_id=UTX06486.1;transl_table=11 CP101611.1 Genbank pseudogene 1600551 1601818 . + . ID=gene-NM058_08275;Name=NM058_08275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08275;pseudo=true CP101611.1 Protein Homology CDS 1600551 1601818 . + 0 ID=cds-NM058_08275;Parent=gene-NM058_08275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390612.1;locus_tag=NM058_08275;product=U32 family peptidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1601824 1602459 . + . ID=gene-NM058_08280;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=NM058_08280 CP101611.1 Protein Homology CDS 1601824 1602459 . + 0 ID=cds-UTX06487.1;Parent=gene-NM058_08280;Dbxref=NCBI_GP:UTX06487.1;Name=UTX06487.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390611.1;locus_tag=NM058_08280;product=uridine kinase;protein_id=UTX06487.1;transl_table=11 CP101611.1 Genbank gene 1602710 1603183 . + . ID=gene-NM058_08285;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=NM058_08285 CP101611.1 Protein Homology CDS 1602710 1603183 . + 0 ID=cds-UTX06488.1;Parent=gene-NM058_08285;Dbxref=NCBI_GP:UTX06488.1;Name=UTX06488.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription%2C elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390610.1;locus_tag=NM058_08285;product=transcription elongation factor GreA;protein_id=UTX06488.1;transl_table=11 CP101611.1 Genbank pseudogene 1603237 1604986 . + . ID=gene-NM058_08290;Name=NM058_08290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08290;pseudo=true CP101611.1 Protein Homology CDS 1603237 1604986 . + 0 ID=cds-NM058_08290;Parent=gene-NM058_08290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390609.1;locus_tag=NM058_08290;product=penicillin-binding protein 2;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1605051 1605752 . + . ID=gene-NM058_08295;Name=NM058_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08295 CP101611.1 Protein Homology CDS 1605051 1605752 . + 0 ID=cds-UTX06489.1;Parent=gene-NM058_08295;Dbxref=NCBI_GP:UTX06489.1;Name=UTX06489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390608.1;locus_tag=NM058_08295;product=YrrS family protein;protein_id=UTX06489.1;transl_table=11 CP101611.1 Genbank gene 1605789 1605992 . - . ID=gene-NM058_08300;Name=NM058_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08300 CP101611.1 Protein Homology CDS 1605789 1605992 . - 0 ID=cds-UTX06490.1;Parent=gene-NM058_08300;Dbxref=NCBI_GP:UTX06490.1;Name=UTX06490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390607.1;locus_tag=NM058_08300;product=YrzA family protein;protein_id=UTX06490.1;transl_table=11 CP101611.1 Genbank gene 1606184 1606825 . + . ID=gene-NM058_08305;Name=NM058_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08305 CP101611.1 Protein Homology CDS 1606184 1606825 . + 0 ID=cds-UTX06491.1;Parent=gene-NM058_08305;Dbxref=NCBI_GP:UTX06491.1;Name=UTX06491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390606.1;locus_tag=NM058_08305;product=class I SAM-dependent methyltransferase;protein_id=UTX06491.1;transl_table=11 CP101611.1 Genbank gene 1606846 1607541 . + . ID=gene-NM058_08310;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=NM058_08310 CP101611.1 Protein Homology CDS 1606846 1607541 . + 0 ID=cds-UTX06492.1;Parent=gene-NM058_08310;Dbxref=NCBI_GP:UTX06492.1;Name=UTX06492.1;Ontology_term=GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390605.1;locus_tag=NM058_08310;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=UTX06492.1;transl_table=11 CP101611.1 Genbank gene 1607603 1608526 . + . ID=gene-NM058_08315;Name=NM058_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08315 CP101611.1 Protein Homology CDS 1607603 1608526 . + 0 ID=cds-UTX06493.1;Parent=gene-NM058_08315;Dbxref=NCBI_GP:UTX06493.1;Name=UTX06493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390604.1;locus_tag=NM058_08315;product=O-acetylserine dependent cystathionine beta-synthase;protein_id=UTX06493.1;transl_table=11 CP101611.1 Genbank gene 1608528 1609667 . + . ID=gene-NM058_08320;Name=NM058_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08320 CP101611.1 Protein Homology CDS 1608528 1609667 . + 0 ID=cds-UTX06494.1;Parent=gene-NM058_08320;Dbxref=NCBI_GP:UTX06494.1;Name=UTX06494.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390603.1;locus_tag=NM058_08320;product=bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase;protein_id=UTX06494.1;transl_table=11 CP101611.1 Genbank pseudogene 1609749 1609978 . + . ID=gene-NM058_08325;Name=NM058_08325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08325;pseudo=true CP101611.1 Protein Homology CDS 1609749 1609978 . + 0 ID=cds-NM058_08325;Parent=gene-NM058_08325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390602.1;locus_tag=NM058_08325;product=YrhC family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1610014 1610496 . - . ID=gene-NM058_08330;Name=NM058_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08330 CP101611.1 Protein Homology CDS 1610014 1610496 . - 0 ID=cds-UTX06495.1;Parent=gene-NM058_08330;Dbxref=NCBI_GP:UTX06495.1;Name=UTX06495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390601.1;locus_tag=NM058_08330;product=DUF1641 domain-containing protein;protein_id=UTX06495.1;transl_table=11 CP101611.1 Genbank gene 1610515 1613457 . - . ID=gene-NM058_08335;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=NM058_08335 CP101611.1 Protein Homology CDS 1610515 1613457 . - 0 ID=cds-UTX06496.1;Parent=gene-NM058_08335;Dbxref=NCBI_GP:UTX06496.1;Name=UTX06496.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390600.1;locus_tag=NM058_08335;product=formate dehydrogenase subunit alpha;protein_id=UTX06496.1;transl_table=11 CP101611.1 Genbank gene 1613772 1614140 . + . ID=gene-NM058_08340;Name=NM058_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08340 CP101611.1 Protein Homology CDS 1613772 1614140 . + 0 ID=cds-UTX06497.1;Parent=gene-NM058_08340;Dbxref=NCBI_GP:UTX06497.1;Name=UTX06497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390599.1;locus_tag=NM058_08340;product=DUF2294 domain-containing protein;protein_id=UTX06497.1;transl_table=11 CP101611.1 Genbank gene 1614402 1615202 . + . ID=gene-NM058_08345;Name=NM058_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08345 CP101611.1 Protein Homology CDS 1614402 1615202 . + 0 ID=cds-UTX06498.1;Parent=gene-NM058_08345;Dbxref=NCBI_GP:UTX06498.1;Name=UTX06498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390598.1;locus_tag=NM058_08345;product=formate/nitrite transporter family protein;protein_id=UTX06498.1;transl_table=11 CP101611.1 Genbank gene 1615592 1615741 . + . ID=gene-NM058_08350;Name=NM058_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08350 CP101611.1 Protein Homology CDS 1615592 1615741 . + 0 ID=cds-UTX06499.1;Parent=gene-NM058_08350;Dbxref=NCBI_GP:UTX06499.1;Name=UTX06499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390597.1;locus_tag=NM058_08350;product=YrzI family small protein;protein_id=UTX06499.1;transl_table=11 CP101611.1 Genbank gene 1615902 1616060 . + . ID=gene-NM058_08355;Name=NM058_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08355 CP101611.1 Protein Homology CDS 1615902 1616060 . + 0 ID=cds-UTX06500.1;Parent=gene-NM058_08355;Dbxref=NCBI_GP:UTX06500.1;Name=UTX06500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513991.1;locus_tag=NM058_08355;product=hypothetical protein;protein_id=UTX06500.1;transl_table=11 CP101611.1 Genbank gene 1616249 1616791 . + . ID=gene-NM058_08360;Name=NM058_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08360 CP101611.1 Protein Homology CDS 1616249 1616791 . + 0 ID=cds-UTX06501.1;Parent=gene-NM058_08360;Dbxref=NCBI_GP:UTX06501.1;Name=UTX06501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390596.1;locus_tag=NM058_08360;product=class I SAM-dependent methyltransferase;protein_id=UTX06501.1;transl_table=11 CP101611.1 Genbank pseudogene 1617016 1617605 . + . ID=gene-NM058_08365;Name=NM058_08365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08365;pseudo=true CP101611.1 Protein Homology CDS 1617016 1617605 . + 0 ID=cds-NM058_08365;Parent=gene-NM058_08365;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390595.1;locus_tag=NM058_08365;product=TetR family transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1617621 1620781 . + . ID=gene-NM058_08370;Name=cypB;gbkey=Gene;gene=cypB;gene_biotype=pseudogene;locus_tag=NM058_08370;pseudo=true CP101611.1 Protein Homology CDS 1617621 1620781 . + 0 ID=cds-NM058_08370;Parent=gene-NM058_08370;Note=frameshifted;gbkey=CDS;gene=cypB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390594.1;locus_tag=NM058_08370;product=bifunctional cytochrome P450/NADPH--P450 reductase CypB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1621062 1621349 . - . ID=gene-NM058_08375;Name=NM058_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08375 CP101611.1 Protein Homology CDS 1621062 1621349 . - 0 ID=cds-UTX06502.1;Parent=gene-NM058_08375;Dbxref=NCBI_GP:UTX06502.1;Name=UTX06502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003237337.1;locus_tag=NM058_08375;product=YrhK family protein;protein_id=UTX06502.1;transl_table=11 CP101611.1 Genbank pseudogene 1621518 1623433 . - . ID=gene-NM058_08380;Name=NM058_08380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08380;pseudo=true CP101611.1 Protein Homology CDS 1621518 1623433 . - 0 ID=cds-NM058_08380;Parent=gene-NM058_08380;Note=frameshifted;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259012.1;locus_tag=NM058_08380;product=acyltransferase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1623541 1624398 . - . ID=gene-NM058_08385;Name=rsiV;gbkey=Gene;gene=rsiV;gene_biotype=protein_coding;locus_tag=NM058_08385 CP101611.1 Protein Homology CDS 1623541 1624398 . - 0 ID=cds-UTX06503.1;Parent=gene-NM058_08385;Dbxref=NCBI_GP:UTX06503.1;Name=UTX06503.1;gbkey=CDS;gene=rsiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390591.1;locus_tag=NM058_08385;product=anti-sigma-V factor RsiV;protein_id=UTX06503.1;transl_table=11 CP101611.1 Genbank gene 1624398 1624898 . - . ID=gene-NM058_08390;Name=sigV;gbkey=Gene;gene=sigV;gene_biotype=protein_coding;locus_tag=NM058_08390 CP101611.1 Protein Homology CDS 1624398 1624898 . - 0 ID=cds-UTX06504.1;Parent=gene-NM058_08390;Dbxref=NCBI_GP:UTX06504.1;Name=UTX06504.1;gbkey=CDS;gene=sigV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390590.1;locus_tag=NM058_08390;product=RNA polymerase sigma factor SigV;protein_id=UTX06504.1;transl_table=11 CP101611.1 Genbank pseudogene 1625102 1625928 . - . ID=gene-NM058_08395;Name=NM058_08395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08395;pseudo=true CP101611.1 Protein Homology CDS 1625102 1625928 . - 0 ID=cds-NM058_08395;Parent=gene-NM058_08395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390589.1;locus_tag=NM058_08395;product=TrmB family transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1626080 1626712 . + . ID=gene-NM058_08400;Name=NM058_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08400 CP101611.1 Protein Homology CDS 1626080 1626712 . + 0 ID=cds-UTX06505.1;Parent=gene-NM058_08400;Dbxref=NCBI_GP:UTX06505.1;Name=UTX06505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390588.1;locus_tag=NM058_08400;product=LysE family transporter;protein_id=UTX06505.1;transl_table=11 CP101611.1 Genbank pseudogene 1626805 1628192 . - . ID=gene-NM058_08405;Name=NM058_08405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08405;pseudo=true CP101611.1 Protein Homology CDS 1626805 1628192 . - 0 ID=cds-NM058_08405;Parent=gene-NM058_08405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390587.2;locus_tag=NM058_08405;product=amino acid permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1628564 1629190 . + . ID=gene-NM058_08410;Name=NM058_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08410 CP101611.1 Protein Homology CDS 1628564 1629190 . + 0 ID=cds-UTX06506.1;Parent=gene-NM058_08410;Dbxref=NCBI_GP:UTX06506.1;Name=UTX06506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003237323.1;locus_tag=NM058_08410;product=hypothetical protein;protein_id=UTX06506.1;transl_table=11 CP101611.1 Genbank pseudogene 1629584 1632390 . + . ID=gene-NM058_08415;Name=levR;gbkey=Gene;gene=levR;gene_biotype=pseudogene;locus_tag=NM058_08415;pseudo=true CP101611.1 Protein Homology CDS 1629584 1632390 . + 0 ID=cds-NM058_08415;Parent=gene-NM058_08415;Note=frameshifted;gbkey=CDS;gene=levR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390586.2;locus_tag=NM058_08415;product=transcriptional regulator LevR;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1632581 1633021 . + . ID=gene-NM058_08420;Name=levD;gbkey=Gene;gene=levD;gene_biotype=protein_coding;locus_tag=NM058_08420 CP101611.1 Protein Homology CDS 1632581 1633021 . + 0 ID=cds-UTX06507.1;Parent=gene-NM058_08420;Dbxref=NCBI_GP:UTX06507.1;Name=UTX06507.1;gbkey=CDS;gene=levD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390585.1;locus_tag=NM058_08420;product=PTS fructose transporter subunit IIA;protein_id=UTX06507.1;transl_table=11 CP101611.1 Genbank pseudogene 1633021 1633508 . + . ID=gene-NM058_08425;Name=levE;gbkey=Gene;gene=levE;gene_biotype=pseudogene;locus_tag=NM058_08425;pseudo=true CP101611.1 Protein Homology CDS 1633021 1633508 . + 0 ID=cds-NM058_08425;Parent=gene-NM058_08425;Note=frameshifted;gbkey=CDS;gene=levE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390584.1;locus_tag=NM058_08425;product=PTS fructose transporter subunit IIB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1633525 1634334 . + . ID=gene-NM058_08430;Name=levF;gbkey=Gene;gene=levF;gene_biotype=protein_coding;locus_tag=NM058_08430 CP101611.1 Protein Homology CDS 1633525 1634334 . + 0 ID=cds-UTX06508.1;Parent=gene-NM058_08430;Dbxref=NCBI_GP:UTX06508.1;Name=UTX06508.1;gbkey=CDS;gene=levF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390583.1;locus_tag=NM058_08430;product=PTS fructose transporter subunit IIC;protein_id=UTX06508.1;transl_table=11 CP101611.1 Genbank gene 1634356 1635183 . + . ID=gene-NM058_08435;Name=levG;gbkey=Gene;gene=levG;gene_biotype=protein_coding;locus_tag=NM058_08435 CP101611.1 Protein Homology CDS 1634356 1635183 . + 0 ID=cds-UTX06509.1;Parent=gene-NM058_08435;Dbxref=NCBI_GP:UTX06509.1;Name=UTX06509.1;gbkey=CDS;gene=levG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390582.1;locus_tag=NM058_08435;product=PTS fructose transporter subunit IID;protein_id=UTX06509.1;transl_table=11 CP101611.1 Genbank gene 1635268 1635411 . + . ID=gene-NM058_08440;Name=NM058_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08440 CP101611.1 Protein Homology CDS 1635268 1635411 . + 0 ID=cds-UTX06510.1;Parent=gene-NM058_08440;Dbxref=NCBI_GP:UTX06510.1;Name=UTX06510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513989.1;locus_tag=NM058_08440;product=hypothetical protein;protein_id=UTX06510.1;transl_table=11 CP101611.1 Genbank gene 1635344 1637377 . + . ID=gene-NM058_08445;Name=NM058_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08445 CP101611.1 Protein Homology CDS 1635344 1637377 . + 0 ID=cds-UTX06511.1;Parent=gene-NM058_08445;Dbxref=NCBI_GP:UTX06511.1;Name=UTX06511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390581.1;locus_tag=NM058_08445;product=GH32 C-terminal domain-containing protein;protein_id=UTX06511.1;transl_table=11 CP101611.1 Genbank pseudogene 1637468 1637976 . - . ID=gene-NM058_08450;Name=yraA;gbkey=Gene;gene=yraA;gene_biotype=pseudogene;gene_synonym=sufL;locus_tag=NM058_08450;pseudo=true CP101611.1 Protein Homology CDS 1637468 1637976 . - 0 ID=cds-NM058_08450;Parent=gene-NM058_08450;Note=frameshifted;gbkey=CDS;gene=yraA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390580.2;locus_tag=NM058_08450;product=cysteine protease YraA;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1638128 1639174 . - . ID=gene-NM058_08455;Name=adhA;gbkey=Gene;gene=adhA;gene_biotype=pseudogene;locus_tag=NM058_08455;pseudo=true CP101611.1 Protein Homology CDS 1638128 1639174 . - 0 ID=cds-NM058_08455;Parent=gene-NM058_08455;Note=frameshifted;gbkey=CDS;gene=adhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390579.2;locus_tag=NM058_08455;product=formaldehyde dehydrogenase AdhA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1639339 1639734 . - . ID=gene-NM058_08460;Name=NM058_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08460 CP101611.1 Protein Homology CDS 1639339 1639734 . - 0 ID=cds-UTX06996.1;Parent=gene-NM058_08460;Dbxref=NCBI_GP:UTX06996.1;Name=UTX06996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017426959.1;locus_tag=NM058_08460;product=cupin domain-containing protein;protein_id=UTX06996.1;transl_table=11 CP101611.1 Genbank pseudogene 1639828 1640076 . - . ID=gene-NM058_08465;Name=NM058_08465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08465;pseudo=true CP101611.1 Protein Homology CDS 1639828 1640076 . - 0 ID=cds-NM058_08465;Parent=gene-NM058_08465;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513988.1;locus_tag=NM058_08465;product=carboxymuconolactone decarboxylase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1640252 1640656 . + . ID=gene-NM058_08470;Name=adhR;gbkey=Gene;gene=adhR;gene_biotype=protein_coding;gene_synonym=yraB;locus_tag=NM058_08470 CP101611.1 Protein Homology CDS 1640252 1640656 . + 0 ID=cds-UTX06512.1;Parent=gene-NM058_08470;Dbxref=NCBI_GP:UTX06512.1;Name=UTX06512.1;gbkey=CDS;gene=adhR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003226000.1;locus_tag=NM058_08470;product=aldehyde stress transcriptional regulator AdhR;protein_id=UTX06512.1;transl_table=11 CP101611.1 Genbank gene 1640743 1641147 . + . ID=gene-NM058_08475;Name=NM058_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08475 CP101611.1 Protein Homology CDS 1640743 1641147 . + 0 ID=cds-UTX06997.1;Parent=gene-NM058_08475;Dbxref=NCBI_GP:UTX06997.1;Name=UTX06997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010348345.1;locus_tag=NM058_08475;product=MerR family transcriptional regulator;protein_id=UTX06997.1;transl_table=11 CP101611.1 Genbank gene 1641323 1642225 . - . ID=gene-NM058_08480;Name=NM058_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08480 CP101611.1 Protein Homology CDS 1641323 1642225 . - 0 ID=cds-UTX06513.1;Parent=gene-NM058_08480;Dbxref=NCBI_GP:UTX06513.1;Name=UTX06513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003226003.1;locus_tag=NM058_08480;product=AraC family transcriptional regulator;protein_id=UTX06513.1;transl_table=11 CP101611.1 Genbank gene 1642391 1643371 . + . ID=gene-NM058_08485;Name=NM058_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08485 CP101611.1 Protein Homology CDS 1642391 1643371 . + 0 ID=cds-UTX06514.1;Parent=gene-NM058_08485;Dbxref=NCBI_GP:UTX06514.1;Name=UTX06514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003226005.1;locus_tag=NM058_08485;product=aldo/keto reductase;protein_id=UTX06514.1;transl_table=11 CP101611.1 Genbank gene 1643407 1643688 . + . ID=gene-NM058_08490;Name=NM058_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08490 CP101611.1 Protein Homology CDS 1643407 1643688 . + 0 ID=cds-UTX06515.1;Parent=gene-NM058_08490;Dbxref=NCBI_GP:UTX06515.1;Name=UTX06515.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019259001.1;locus_tag=NM058_08490;product=HPr family phosphocarrier protein;protein_id=UTX06515.1;transl_table=11 CP101611.1 Genbank gene 1643850 1644149 . - . ID=gene-NM058_08495;Name=NM058_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08495 CP101611.1 Protein Homology CDS 1643850 1644149 . - 0 ID=cds-UTX06516.1;Parent=gene-NM058_08495;Dbxref=NCBI_GP:UTX06516.1;Name=UTX06516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390576.1;locus_tag=NM058_08495;product=spore coat protein;protein_id=UTX06516.1;transl_table=11 CP101611.1 Genbank gene 1644165 1644362 . - . ID=gene-NM058_08500;Name=NM058_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08500 CP101611.1 Protein Homology CDS 1644165 1644362 . - 0 ID=cds-UTX06517.1;Parent=gene-NM058_08500;Dbxref=NCBI_GP:UTX06517.1;Name=UTX06517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390575.1;locus_tag=NM058_08500;product=hypothetical protein;protein_id=UTX06517.1;transl_table=11 CP101611.1 Genbank pseudogene 1644382 1645517 . - . ID=gene-NM058_08505;Name=NM058_08505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08505;pseudo=true CP101611.1 Protein Homology CDS 1644382 1645517 . - 0 ID=cds-NM058_08505;Parent=gene-NM058_08505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390574.2;locus_tag=NM058_08505;product=glutathione-dependent formaldehyde dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1645536 1645904 . - . ID=gene-NM058_08510;Name=NM058_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08510 CP101611.1 Protein Homology CDS 1645536 1645904 . - 0 ID=cds-UTX06518.1;Parent=gene-NM058_08510;Dbxref=NCBI_GP:UTX06518.1;Name=UTX06518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390573.1;locus_tag=NM058_08510;product=spore coat protein;protein_id=UTX06518.1;transl_table=11 CP101611.1 Genbank gene 1645922 1646167 . - . ID=gene-NM058_08515;Name=NM058_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08515 CP101611.1 Protein Homology CDS 1645922 1646167 . - 0 ID=cds-UTX06519.1;Parent=gene-NM058_08515;Dbxref=NCBI_GP:UTX06519.1;Name=UTX06519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390572.1;locus_tag=NM058_08515;product=spore gernimation protein GerQ;protein_id=UTX06519.1;transl_table=11 CP101611.1 Genbank gene 1646603 1646962 . + . ID=gene-NM058_08520;Name=NM058_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08520 CP101611.1 Protein Homology CDS 1646603 1646962 . + 0 ID=cds-UTX06520.1;Parent=gene-NM058_08520;Dbxref=NCBI_GP:UTX06520.1;Name=UTX06520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390570.2;locus_tag=NM058_08520;product=SH3 domain-containing protein;protein_id=UTX06520.1;transl_table=11 CP101611.1 Genbank gene 1647014 1647370 . + . ID=gene-NM058_08525;Name=NM058_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08525 CP101611.1 Protein Homology CDS 1647014 1647370 . + 0 ID=cds-UTX06521.1;Parent=gene-NM058_08525;Dbxref=NCBI_GP:UTX06521.1;Name=UTX06521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390569.2;locus_tag=NM058_08525;product=SH3 domain-containing protein;protein_id=UTX06521.1;transl_table=11 CP101611.1 Genbank gene 1647607 1648167 . + . ID=gene-NM058_08530;Name=NM058_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08530 CP101611.1 Protein Homology CDS 1647607 1648167 . + 0 ID=cds-UTX06522.1;Parent=gene-NM058_08530;Dbxref=NCBI_GP:UTX06522.1;Name=UTX06522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845567.1;locus_tag=NM058_08530;product=sugar O-acetyltransferase;protein_id=UTX06522.1;transl_table=11 CP101611.1 Genbank gene 1648478 1649353 . + . ID=gene-NM058_08535;Name=NM058_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08535 CP101611.1 Protein Homology CDS 1648478 1649353 . + 0 ID=cds-UTX06523.1;Parent=gene-NM058_08535;Dbxref=NCBI_GP:UTX06523.1;Name=UTX06523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015615877.1;locus_tag=NM058_08535;product=DMT family transporter;protein_id=UTX06523.1;transl_table=11 CP101611.1 Genbank gene 1649476 1650300 . - . ID=gene-NM058_08540;Name=NM058_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08540 CP101611.1 Protein Homology CDS 1649476 1650300 . - 0 ID=cds-UTX06524.1;Parent=gene-NM058_08540;Dbxref=NCBI_GP:UTX06524.1;Name=UTX06524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003237269.1;locus_tag=NM058_08540;product=alpha/beta hydrolase;protein_id=UTX06524.1;transl_table=11 CP101611.1 Genbank gene 1650437 1650700 . - . ID=gene-NM058_08545;Name=NM058_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08545 CP101611.1 Protein Homology CDS 1650437 1650700 . - 0 ID=cds-UTX06525.1;Parent=gene-NM058_08545;Dbxref=NCBI_GP:UTX06525.1;Name=UTX06525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390567.1;locus_tag=NM058_08545;product=CD3324 family protein;protein_id=UTX06525.1;transl_table=11 CP101611.1 Genbank gene 1651145 1651981 . + . ID=gene-NM058_08550;Name=csn;gbkey=Gene;gene=csn;gene_biotype=protein_coding;locus_tag=NM058_08550 CP101611.1 Protein Homology CDS 1651145 1651981 . + 0 ID=cds-UTX06526.1;Parent=gene-NM058_08550;Dbxref=NCBI_GP:UTX06526.1;Name=UTX06526.1;gbkey=CDS;gene=csn;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390566.1;locus_tag=NM058_08550;product=chitosanase;protein_id=UTX06526.1;transl_table=11 CP101611.1 Genbank gene 1652142 1653119 . - . ID=gene-NM058_08555;Name=NM058_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08555 CP101611.1 Protein Homology CDS 1652142 1653119 . - 0 ID=cds-UTX06527.1;Parent=gene-NM058_08555;Dbxref=NCBI_GP:UTX06527.1;Name=UTX06527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390562.2;locus_tag=NM058_08555;product=aldo/keto reductase;protein_id=UTX06527.1;transl_table=11 CP101611.1 Genbank gene 1653255 1653791 . + . ID=gene-NM058_08560;Name=sigZ;gbkey=Gene;gene=sigZ;gene_biotype=protein_coding;locus_tag=NM058_08560 CP101611.1 Protein Homology CDS 1653255 1653791 . + 0 ID=cds-UTX06528.1;Parent=gene-NM058_08560;Dbxref=NCBI_GP:UTX06528.1;Name=UTX06528.1;gbkey=CDS;gene=sigZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390561.1;locus_tag=NM058_08560;product=RNA polymerase sigma factor SigZ;protein_id=UTX06528.1;transl_table=11 CP101611.1 Genbank gene 1653937 1654710 . + . ID=gene-NM058_08565;Name=NM058_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08565 CP101611.1 Protein Homology CDS 1653937 1654710 . + 0 ID=cds-UTX06529.1;Parent=gene-NM058_08565;Dbxref=NCBI_GP:UTX06529.1;Name=UTX06529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390560.1;locus_tag=NM058_08565;product=metal-binding protein ZinT;protein_id=UTX06529.1;transl_table=11 CP101611.1 Genbank gene 1655044 1656825 . + . ID=gene-NM058_08570;Name=NM058_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08570 CP101611.1 Protein Homology CDS 1655044 1656825 . + 0 ID=cds-UTX06530.1;Parent=gene-NM058_08570;Dbxref=NCBI_GP:UTX06530.1;Name=UTX06530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003226026.1;locus_tag=NM058_08570;product=phosphatase PAP2 family protein;protein_id=UTX06530.1;transl_table=11 CP101611.1 Genbank gene 1657247 1658569 . + . ID=gene-NM058_08575;Name=NM058_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08575 CP101611.1 Protein Homology CDS 1657247 1658569 . + 0 ID=cds-UTX06531.1;Parent=gene-NM058_08575;Dbxref=NCBI_GP:UTX06531.1;Name=UTX06531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003179981.1;locus_tag=NM058_08575;product=DUF418 domain-containing protein;protein_id=UTX06531.1;transl_table=11 CP101611.1 Genbank gene 1659248 1660069 . - . ID=gene-NM058_08580;Name=nikE;gbkey=Gene;gene=nikE;gene_biotype=protein_coding;locus_tag=NM058_08580 CP101611.1 Protein Homology CDS 1659248 1660069 . - 0 ID=cds-UTX06532.1;Parent=gene-NM058_08580;Dbxref=NCBI_GP:UTX06532.1;Name=UTX06532.1;Ontology_term=GO:0015675,GO:0005524,GO:0015413,GO:0009898,GO:0043190;gbkey=CDS;gene=nikE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type nickel transporter activity|0015413||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258985.1;locus_tag=NM058_08580;product=nickel import ATP-binding protein NikE;protein_id=UTX06532.1;transl_table=11 CP101611.1 Genbank gene 1660101 1660928 . - . ID=gene-NM058_08585;Name=nikD;gbkey=Gene;gene=nikD;gene_biotype=protein_coding;locus_tag=NM058_08585 CP101611.1 Protein Homology CDS 1660101 1660928 . - 0 ID=cds-UTX06533.1;Parent=gene-NM058_08585;Dbxref=NCBI_GP:UTX06533.1;Name=UTX06533.1;Ontology_term=GO:0015675,GO:0005524,GO:0015413,GO:0009898,GO:0043190;gbkey=CDS;gene=nikD;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type nickel transporter activity|0015413||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010335058.1;locus_tag=NM058_08585;product=nickel import ATP-binding protein NikD;protein_id=UTX06533.1;transl_table=11 CP101611.1 Genbank gene 1660946 1661776 . - . ID=gene-NM058_08590;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=NM058_08590 CP101611.1 Protein Homology CDS 1660946 1661776 . - 0 ID=cds-UTX06534.1;Parent=gene-NM058_08590;Dbxref=NCBI_GP:UTX06534.1;Name=UTX06534.1;Ontology_term=GO:0015675,GO:0015413,GO:0005887,GO:0055052;gbkey=CDS;gene=nikC;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010335057.1;locus_tag=NM058_08590;product=nickel ABC transporter permease subunit NikC;protein_id=UTX06534.1;transl_table=11 CP101611.1 Genbank gene 1661773 1662717 . - . ID=gene-NM058_08595;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=NM058_08595 CP101611.1 Protein Homology CDS 1661773 1662717 . - 0 ID=cds-UTX06535.1;Parent=gene-NM058_08595;Dbxref=NCBI_GP:UTX06535.1;Name=UTX06535.1;Ontology_term=GO:0015675,GO:0015413,GO:0005887,GO:0055052;gbkey=CDS;gene=nikB;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003183800.1;locus_tag=NM058_08595;product=nickel ABC transporter permease subunit NikB;protein_id=UTX06535.1;transl_table=11 CP101611.1 Genbank gene 1662727 1664343 . - . ID=gene-NM058_08600;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=NM058_08600 CP101611.1 Protein Homology CDS 1662727 1664343 . - 0 ID=cds-UTX06536.1;Parent=gene-NM058_08600;Dbxref=NCBI_GP:UTX06536.1;Name=UTX06536.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0030288,GO:0031362,GO:0055052;gbkey=CDS;gene=nikA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,anchored component of external side of plasma membrane|0031362||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258981.1;locus_tag=NM058_08600;product=nickel ABC transporter substrate-binding protein;protein_id=UTX06536.1;transl_table=11 CP101611.1 Genbank gene 1665170 1665325 . + . ID=gene-NM058_08605;Name=NM058_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08605 CP101611.1 Protein Homology CDS 1665170 1665325 . + 0 ID=cds-UTX06537.1;Parent=gene-NM058_08605;Dbxref=NCBI_GP:UTX06537.1;Name=UTX06537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014480367.1;locus_tag=NM058_08605;product=hypothetical protein;protein_id=UTX06537.1;transl_table=11 CP101611.1 Genbank gene 1665373 1665744 . + . ID=gene-NM058_08610;Name=NM058_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08610 CP101611.1 Protein Homology CDS 1665373 1665744 . + 0 ID=cds-UTX06538.1;Parent=gene-NM058_08610;Dbxref=NCBI_GP:UTX06538.1;Name=UTX06538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390554.1;locus_tag=NM058_08610;product=DUF2568 domain-containing protein;protein_id=UTX06538.1;transl_table=11 CP101611.1 Genbank gene 1665904 1665981 . - . ID=gene-NM058_08615;Name=NM058_08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08615 CP101611.1 Protein Homology CDS 1665904 1665981 . - 0 ID=cds-UTX06998.1;Parent=gene-NM058_08615;Dbxref=NCBI_GP:UTX06998.1;Name=UTX06998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513985.1;locus_tag=NM058_08615;product=YjcZ family sporulation protein;protein_id=UTX06998.1;transl_table=11 CP101611.1 Genbank pseudogene 1666101 1666214 . - . ID=gene-NM058_08620;Name=NM058_08620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08620;pseudo=true CP101611.1 Protein Homology CDS 1666101 1666214 . - 0 ID=cds-NM058_08620;Parent=gene-NM058_08620;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003226005.1;locus_tag=NM058_08620;product=aldo/keto reductase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1666300 1666461 . - . ID=gene-NM058_08625;Name=NM058_08625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08625;pseudo=true CP101611.1 Protein Homology CDS 1666300 1666461 . - 0 ID=cds-NM058_08625;Parent=gene-NM058_08625;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003237137.1;locus_tag=NM058_08625;product=RNA polymerase subunit sigma-70;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1666533 1667921 . + . ID=gene-NM058_08630;Name=NM058_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08630 CP101611.1 Protein Homology CDS 1666533 1667921 . + 0 ID=cds-UTX06539.1;Parent=gene-NM058_08630;Dbxref=NCBI_GP:UTX06539.1;Name=UTX06539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388399.2;locus_tag=NM058_08630;product=PLP-dependent aminotransferase family protein;protein_id=UTX06539.1;transl_table=11 CP101611.1 Genbank gene 1668033 1669313 . + . ID=gene-NM058_08635;Name=NM058_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08635 CP101611.1 Protein Homology CDS 1668033 1669313 . + 0 ID=cds-UTX06540.1;Parent=gene-NM058_08635;Dbxref=NCBI_GP:UTX06540.1;Name=UTX06540.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003237234.1;locus_tag=NM058_08635;product=MFS transporter;protein_id=UTX06540.1;transl_table=11 CP101611.1 Genbank gene 1669507 1669965 . - . ID=gene-NM058_08640;Name=NM058_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08640 CP101611.1 Protein Homology CDS 1669507 1669965 . - 0 ID=cds-UTX06541.1;Parent=gene-NM058_08640;Dbxref=NCBI_GP:UTX06541.1;Name=UTX06541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390537.1;locus_tag=NM058_08640;product=GNAT family N-acetyltransferase;protein_id=UTX06541.1;transl_table=11 CP101611.1 Genbank gene 1670252 1670755 . + . ID=gene-NM058_08645;Name=NM058_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08645 CP101611.1 Protein Homology CDS 1670252 1670755 . + 0 ID=cds-UTX06542.1;Parent=gene-NM058_08645;Dbxref=NCBI_GP:UTX06542.1;Name=UTX06542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390555.1;locus_tag=NM058_08645;product=DinB family protein;protein_id=UTX06542.1;transl_table=11 CP101611.1 Genbank gene 1671395 1672054 . + . ID=gene-NM058_08650;Name=NM058_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08650 CP101611.1 Protein Homology CDS 1671395 1672054 . + 0 ID=cds-UTX06543.1;Parent=gene-NM058_08650;Dbxref=NCBI_GP:UTX06543.1;Name=UTX06543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002090708.1;locus_tag=NM058_08650;product=GntR family transcriptional regulator;protein_id=UTX06543.1;transl_table=11 CP101611.1 Genbank gene 1672041 1673033 . + . ID=gene-NM058_08655;Name=NM058_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08655 CP101611.1 Protein Homology CDS 1672041 1673033 . + 0 ID=cds-UTX06544.1;Parent=gene-NM058_08655;Dbxref=NCBI_GP:UTX06544.1;Name=UTX06544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003337498.1;locus_tag=NM058_08655;product=multidrug resistance efflux transporter family protein;protein_id=UTX06544.1;transl_table=11 CP101611.1 Genbank gene 1673447 1674331 . - . ID=gene-NM058_08660;Name=NM058_08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08660 CP101611.1 Protein Homology CDS 1673447 1674331 . - 0 ID=cds-UTX06545.1;Parent=gene-NM058_08660;Dbxref=NCBI_GP:UTX06545.1;Name=UTX06545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003237224.1;locus_tag=NM058_08660;product=AraC family transcriptional regulator;protein_id=UTX06545.1;transl_table=11 CP101611.1 Genbank pseudogene 1674445 1675420 . + . ID=gene-NM058_08665;Name=NM058_08665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08665;pseudo=true CP101611.1 Protein Homology CDS 1674445 1675420 . + 0 ID=cds-NM058_08665;Parent=gene-NM058_08665;Note=frameshifted;Ontology_term=GO:0016020,GO:0016021;gbkey=CDS;go_component=membrane|0016020||IEA,integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388397.1;locus_tag=NM058_08665;product=EamA family transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1675891 1676988 . + . ID=gene-NM058_08670;Name=NM058_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08670 CP101611.1 Protein Homology CDS 1675891 1676988 . + 0 ID=cds-UTX06546.1;Parent=gene-NM058_08670;Dbxref=NCBI_GP:UTX06546.1;Name=UTX06546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003244107.1;locus_tag=NM058_08670;product=glycoside hydrolase family 26 protein;protein_id=UTX06546.1;transl_table=11 CP101611.1 Genbank gene 1677255 1678121 . - . ID=gene-NM058_08675;Name=NM058_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08675 CP101611.1 Protein Homology CDS 1677255 1678121 . - 0 ID=cds-UTX06547.1;Parent=gene-NM058_08675;Dbxref=NCBI_GP:UTX06547.1;Name=UTX06547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390540.1;locus_tag=NM058_08675;product=LysR family transcriptional regulator;protein_id=UTX06547.1;transl_table=11 CP101611.1 Genbank gene 1678247 1679212 . + . ID=gene-NM058_08680;Name=NM058_08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08680 CP101611.1 Protein Homology CDS 1678247 1679212 . + 0 ID=cds-UTX06548.1;Parent=gene-NM058_08680;Dbxref=NCBI_GP:UTX06548.1;Name=UTX06548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390539.1;locus_tag=NM058_08680;product=DMT family transporter;protein_id=UTX06548.1;transl_table=11 CP101611.1 Genbank gene 1679230 1679379 . + . ID=gene-NM058_08685;Name=NM058_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08685 CP101611.1 Protein Homology CDS 1679230 1679379 . + 0 ID=cds-UTX06549.1;Parent=gene-NM058_08685;Dbxref=NCBI_GP:UTX06549.1;Name=UTX06549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097765.1;locus_tag=NM058_08685;product=YrzO family protein;protein_id=UTX06549.1;transl_table=11 CP101611.1 Genbank gene 1679829 1680635 . + . ID=gene-NM058_08690;Name=NM058_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08690 CP101611.1 Protein Homology CDS 1679829 1680635 . + 0 ID=cds-UTX06550.1;Parent=gene-NM058_08690;Dbxref=NCBI_GP:UTX06550.1;Name=UTX06550.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=NM058_08690;product=LysR family transcriptional regulator;protein_id=UTX06550.1;transl_table=11 CP101611.1 Genbank pseudogene 1680707 1680820 . - . ID=gene-NM058_08695;Name=NM058_08695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08695;pseudo=true CP101611.1 Protein Homology CDS 1680707 1680820 . - 0 ID=cds-NM058_08695;Parent=gene-NM058_08695;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390515.1;locus_tag=NM058_08695;product=ImmA/IrrE family metallo-endopeptidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1681088 1681624 . + . ID=gene-NM058_08700;Name=NM058_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08700 CP101611.1 Protein Homology CDS 1681088 1681624 . + 0 ID=cds-UTX06551.1;Parent=gene-NM058_08700;Dbxref=NCBI_GP:UTX06551.1;Name=UTX06551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390514.1;locus_tag=NM058_08700;product=AAA family ATPase;protein_id=UTX06551.1;transl_table=11 CP101611.1 Genbank gene 1681820 1682362 . - . ID=gene-NM058_08705;Name=NM058_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08705 CP101611.1 Protein Homology CDS 1681820 1682362 . - 0 ID=cds-UTX06552.1;Parent=gene-NM058_08705;Dbxref=NCBI_GP:UTX06552.1;Name=UTX06552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015483459.1;locus_tag=NM058_08705;product=PadR family transcriptional regulator;protein_id=UTX06552.1;transl_table=11 CP101611.1 Genbank gene 1682359 1683201 . - . ID=gene-NM058_08710;Name=NM058_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08710 CP101611.1 Protein Homology CDS 1682359 1683201 . - 0 ID=cds-UTX06999.1;Parent=gene-NM058_08710;Dbxref=NCBI_GP:UTX06999.1;Name=UTX06999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012118037.1;locus_tag=NM058_08710;product=sialate O-acetylesterase;protein_id=UTX06999.1;transl_table=11 CP101611.1 Genbank gene 1683649 1684050 . + . ID=gene-NM058_08715;Name=NM058_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08715 CP101611.1 Protein Homology CDS 1683649 1684050 . + 0 ID=cds-UTX06553.1;Parent=gene-NM058_08715;Dbxref=NCBI_GP:UTX06553.1;Name=UTX06553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003237195.1;locus_tag=NM058_08715;product=hypothetical protein;protein_id=UTX06553.1;transl_table=11 CP101611.1 Genbank pseudogene 1684318 1684926 . + . ID=gene-NM058_08720;Name=NM058_08720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08720;pseudo=true CP101611.1 Protein Homology CDS 1684318 1684926 . + 0 ID=cds-NM058_08720;Parent=gene-NM058_08720;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390469.1;locus_tag=NM058_08720;product=phage portal protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1684972 1685394 . + . ID=gene-NM058_08725;Name=NM058_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08725 CP101611.1 Protein Homology CDS 1684972 1685394 . + 0 ID=cds-UTX06554.1;Parent=gene-NM058_08725;Dbxref=NCBI_GP:UTX06554.1;Name=UTX06554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390468.1;locus_tag=NM058_08725;product=holin family protein;protein_id=UTX06554.1;transl_table=11 CP101611.1 Genbank gene 1685434 1685622 . + . ID=gene-NM058_08730;Name=NM058_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08730 CP101611.1 GeneMarkS-2+ CDS 1685434 1685622 . + 0 ID=cds-UTX06555.1;Parent=gene-NM058_08730;Dbxref=NCBI_GP:UTX06555.1;Name=UTX06555.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_08730;product=hypothetical protein;protein_id=UTX06555.1;transl_table=11 CP101611.1 Genbank pseudogene 1685626 1686248 . + . ID=gene-NM058_08735;Name=NM058_08735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08735;pseudo=true CP101611.1 Protein Homology CDS 1685626 1686248 . + 0 ID=cds-NM058_08735;Parent=gene-NM058_08735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003237191.1;locus_tag=NM058_08735;product=peptidoglycan-binding protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1686904 1687179 . + . ID=gene-NM058_08740;Name=NM058_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08740 CP101611.1 Protein Homology CDS 1686904 1687179 . + 0 ID=cds-UTX06556.1;Parent=gene-NM058_08740;Dbxref=NCBI_GP:UTX06556.1;Name=UTX06556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390550.1;locus_tag=NM058_08740;product=barstar family protein;protein_id=UTX06556.1;transl_table=11 CP101611.1 Genbank gene 1687374 1687673 . - . ID=gene-NM058_08745;Name=NM058_08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08745 CP101611.1 Protein Homology CDS 1687374 1687673 . - 0 ID=cds-UTX06557.1;Parent=gene-NM058_08745;Dbxref=NCBI_GP:UTX06557.1;Name=UTX06557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019260160.1;locus_tag=NM058_08745;product=contact-dependent growth inhibition system immunity protein;protein_id=UTX06557.1;transl_table=11 CP101611.1 Genbank gene 1687793 1687993 . - . ID=gene-NM058_08750;Name=NM058_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08750 CP101611.1 Protein Homology CDS 1687793 1687993 . - 0 ID=cds-UTX07000.1;Parent=gene-NM058_08750;Dbxref=NCBI_GP:UTX07000.1;Name=UTX07000.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037816.2;locus_tag=NM058_08750;product=hypothetical protein;protein_id=UTX07000.1;transl_table=11 CP101611.1 Genbank gene 1688175 1688627 . - . ID=gene-NM058_08755;Name=NM058_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08755 CP101611.1 Protein Homology CDS 1688175 1688627 . - 0 ID=cds-UTX06558.1;Parent=gene-NM058_08755;Dbxref=NCBI_GP:UTX06558.1;Name=UTX06558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014477424.1;locus_tag=NM058_08755;product=SMI1/KNR4 family protein;protein_id=UTX06558.1;transl_table=11 CP101611.1 Genbank gene 1688639 1690492 . - . ID=gene-NM058_08760;Name=NM058_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08760 CP101611.1 Protein Homology CDS 1688639 1690492 . - 0 ID=cds-UTX06559.1;Parent=gene-NM058_08760;Dbxref=NCBI_GP:UTX06559.1;Name=UTX06559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019260158.1;locus_tag=NM058_08760;product=T7SS effector LXG polymorphic toxin;protein_id=UTX06559.1;transl_table=11 CP101611.1 Genbank pseudogene 1690717 1690838 . - . ID=gene-NM058_08765;Name=NM058_08765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08765;pseudo=true CP101611.1 Protein Homology CDS 1690717 1690838 . - 0 ID=cds-NM058_08765;Parent=gene-NM058_08765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390461.1;locus_tag=NM058_08765;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1691556 1692683 . + . ID=gene-NM058_08770;Name=NM058_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08770 CP101611.1 Protein Homology CDS 1691556 1692683 . + 0 ID=cds-UTX06560.1;Parent=gene-NM058_08770;Dbxref=NCBI_GP:UTX06560.1;Name=UTX06560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003243267.1;locus_tag=NM058_08770;product=tetratricopeptide repeat protein;protein_id=UTX06560.1;transl_table=11 CP101611.1 Genbank gene 1693322 1693771 . - . ID=gene-NM058_08775;Name=NM058_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08775 CP101611.1 Protein Homology CDS 1693322 1693771 . - 0 ID=cds-UTX06561.1;Parent=gene-NM058_08775;Dbxref=NCBI_GP:UTX06561.1;Name=UTX06561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003226084.1;locus_tag=NM058_08775;product=DUF1569 domain-containing protein;protein_id=UTX06561.1;transl_table=11 CP101611.1 Genbank pseudogene 1694132 1694319 . + . ID=gene-NM058_08780;Name=NM058_08780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08780;pseudo=true CP101611.1 Protein Homology CDS 1694132 1694319 . + 0 ID=cds-NM058_08780;Parent=gene-NM058_08780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390517.1;locus_tag=NM058_08780;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1694268 1694387 . + . ID=gene-NM058_08785;Name=NM058_08785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08785;pseudo=true CP101611.1 Protein Homology CDS 1694268 1694387 . + 0 ID=cds-NM058_08785;Parent=gene-NM058_08785;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390454.2;locus_tag=NM058_08785;product=recombinase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1694475 1695215 . - . ID=gene-NM058_08790;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=NM058_08790 CP101611.1 Protein Homology CDS 1694475 1695215 . - 0 ID=cds-UTX06562.1;Parent=gene-NM058_08790;Dbxref=NCBI_GP:UTX06562.1;Name=UTX06562.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000189159.1;locus_tag=NM058_08790;product=oxygen-insensitive NADPH nitroreductase;protein_id=UTX06562.1;transl_table=11 CP101611.1 Genbank gene 1695608 1695967 . - . ID=gene-NM058_08795;Name=NM058_08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08795 CP101611.1 Protein Homology CDS 1695608 1695967 . - 0 ID=cds-UTX06563.1;Parent=gene-NM058_08795;Dbxref=NCBI_GP:UTX06563.1;Name=UTX06563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003226073.1;locus_tag=NM058_08795;product=winged helix-turn-helix transcriptional regulator;protein_id=UTX06563.1;transl_table=11 CP101611.1 Genbank gene 1696198 1696932 . + . ID=gene-NM058_08800;Name=NM058_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08800 CP101611.1 Protein Homology CDS 1696198 1696932 . + 0 ID=cds-UTX06564.1;Parent=gene-NM058_08800;Dbxref=NCBI_GP:UTX06564.1;Name=UTX06564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014114533.1;locus_tag=NM058_08800;product=NAD(P)-binding domain-containing protein;protein_id=UTX06564.1;transl_table=11 CP101611.1 Genbank gene 1697444 1698019 . + . ID=gene-NM058_08805;Name=NM058_08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08805 CP101611.1 Protein Homology CDS 1697444 1698019 . + 0 ID=cds-UTX06565.1;Parent=gene-NM058_08805;Dbxref=NCBI_GP:UTX06565.1;Name=UTX06565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007409571.1;locus_tag=NM058_08805;product=TetR/AcrR family transcriptional regulator;protein_id=UTX06565.1;transl_table=11 CP101611.1 Genbank gene 1698079 1698828 . + . ID=gene-NM058_08810;Name=NM058_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08810 CP101611.1 Protein Homology CDS 1698079 1698828 . + 0 ID=cds-UTX06566.1;Parent=gene-NM058_08810;Dbxref=NCBI_GP:UTX06566.1;Name=UTX06566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007609629.1;locus_tag=NM058_08810;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=UTX06566.1;transl_table=11 CP101611.1 Genbank pseudogene 1699092 1700104 . + . ID=gene-NM058_08815;Name=NM058_08815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08815;pseudo=true CP101611.1 Protein Homology CDS 1699092 1700104 . + 0 ID=cds-NM058_08815;Parent=gene-NM058_08815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003217281.1;locus_tag=NM058_08815;product=NADP-dependent oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1700554 1700683 . + . ID=gene-NM058_08820;Name=NM058_08820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08820;pseudo=true CP101611.1 Protein Homology CDS 1700554 1700683 . + 0 ID=cds-NM058_08820;Parent=gene-NM058_08820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390517.1;locus_tag=NM058_08820;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1700936 1701052 . - . ID=gene-NM058_08825;Name=NM058_08825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08825;pseudo=true CP101611.1 Protein Homology CDS 1700936 1701052 . - 0 ID=cds-NM058_08825;Parent=gene-NM058_08825;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390464.1;locus_tag=NM058_08825;product=suppressor of fused domain protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1701261 1701587 . + . ID=gene-NM058_08830;Name=NM058_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08830 CP101611.1 Protein Homology CDS 1701261 1701587 . + 0 ID=cds-UTX07001.1;Parent=gene-NM058_08830;Dbxref=NCBI_GP:UTX07001.1;Name=UTX07001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003347248.1;locus_tag=NM058_08830;product=sulfurtransferase;protein_id=UTX07001.1;transl_table=11 CP101611.1 Genbank gene 1701606 1701866 . + . ID=gene-NM058_08835;Name=NM058_08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08835 CP101611.1 Protein Homology CDS 1701606 1701866 . + 0 ID=cds-UTX06567.1;Parent=gene-NM058_08835;Dbxref=NCBI_GP:UTX06567.1;Name=UTX06567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010331187.1;locus_tag=NM058_08835;product=metal-sensitive transcriptional regulator;protein_id=UTX06567.1;transl_table=11 CP101611.1 Genbank pseudogene 1702020 1702501 . + . ID=gene-NM058_08840;Name=NM058_08840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08840;pseudo=true CP101611.1 Protein Homology CDS 1702020 1702501 . + 0 ID=cds-NM058_08840;Parent=gene-NM058_08840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390531.1;locus_tag=NM058_08840;product=DsrE/DsrF/DrsH-like family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1702543 1702911 . + . ID=gene-NM058_08845;Name=NM058_08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08845 CP101611.1 Protein Homology CDS 1702543 1702911 . + 0 ID=cds-UTX06568.1;Parent=gene-NM058_08845;Dbxref=NCBI_GP:UTX06568.1;Name=UTX06568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003237168.1;locus_tag=NM058_08845;product=rhodanese-like domain-containing protein;protein_id=UTX06568.1;transl_table=11 CP101611.1 Genbank gene 1702978 1703535 . + . ID=gene-NM058_08850;Name=NM058_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08850 CP101611.1 Protein Homology CDS 1702978 1703535 . + 0 ID=cds-UTX06569.1;Parent=gene-NM058_08850;Dbxref=NCBI_GP:UTX06569.1;Name=UTX06569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390530.1;locus_tag=NM058_08850;product=sulfurtransferase TusA family protein;protein_id=UTX06569.1;transl_table=11 CP101611.1 Genbank gene 1703557 1703949 . + . ID=gene-NM058_08855;Name=NM058_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08855 CP101611.1 Protein Homology CDS 1703557 1703949 . + 0 ID=cds-UTX06570.1;Parent=gene-NM058_08855;Dbxref=NCBI_GP:UTX06570.1;Name=UTX06570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258961.1;locus_tag=NM058_08855;product=DsrE/DsrF/DrsH-like family protein;protein_id=UTX06570.1;transl_table=11 CP101611.1 Genbank pseudogene 1703985 1705116 . + . ID=gene-NM058_08860;Name=NM058_08860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08860;pseudo=true CP101611.1 Protein Homology CDS 1703985 1705116 . + 0 ID=cds-NM058_08860;Parent=gene-NM058_08860;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390528.2;locus_tag=NM058_08860;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1705151 1705378 . + . ID=gene-NM058_08865;Name=NM058_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08865 CP101611.1 Protein Homology CDS 1705151 1705378 . + 0 ID=cds-UTX06571.1;Parent=gene-NM058_08865;Dbxref=NCBI_GP:UTX06571.1;Name=UTX06571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390527.1;locus_tag=NM058_08865;product=sulfurtransferase TusA family protein;protein_id=UTX06571.1;transl_table=11 CP101611.1 Genbank gene 1705441 1706217 . + . ID=gene-NM058_08870;Name=NM058_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08870 CP101611.1 Protein Homology CDS 1705441 1706217 . + 0 ID=cds-UTX06572.1;Parent=gene-NM058_08870;Dbxref=NCBI_GP:UTX06572.1;Name=UTX06572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390526.1;locus_tag=NM058_08870;product=sulfite exporter TauE/SafE family protein;protein_id=UTX06572.1;transl_table=11 CP101611.1 Genbank gene 1706526 1707527 . - . ID=gene-NM058_08875;Name=NM058_08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08875 CP101611.1 Protein Homology CDS 1706526 1707527 . - 0 ID=cds-UTX06573.1;Parent=gene-NM058_08875;Dbxref=NCBI_GP:UTX06573.1;Name=UTX06573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014112752.1;locus_tag=NM058_08875;product=LLM class flavin-dependent oxidoreductase;protein_id=UTX06573.1;transl_table=11 CP101611.1 Genbank gene 1707790 1708200 . + . ID=gene-NM058_08880;Name=lrpA;gbkey=Gene;gene=lrpA;gene_biotype=protein_coding;locus_tag=NM058_08880 CP101611.1 Protein Homology CDS 1707790 1708200 . + 0 ID=cds-UTX06574.1;Parent=gene-NM058_08880;Dbxref=NCBI_GP:UTX06574.1;Name=UTX06574.1;gbkey=CDS;gene=lrpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388386.1;locus_tag=NM058_08880;product=transcriptional regulator LrpA;protein_id=UTX06574.1;transl_table=11 CP101611.1 Genbank gene 1708343 1708792 . - . ID=gene-NM058_08885;Name=NM058_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08885 CP101611.1 Protein Homology CDS 1708343 1708792 . - 0 ID=cds-UTX06575.1;Parent=gene-NM058_08885;Dbxref=NCBI_GP:UTX06575.1;Name=UTX06575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388387.1;locus_tag=NM058_08885;product=Lrp/AsnC family transcriptional regulator;protein_id=UTX06575.1;transl_table=11 CP101611.1 Genbank gene 1708908 1709450 . + . ID=gene-NM058_08890;Name=NM058_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08890 CP101611.1 Protein Homology CDS 1708908 1709450 . + 0 ID=cds-UTX06576.1;Parent=gene-NM058_08890;Dbxref=NCBI_GP:UTX06576.1;Name=UTX06576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388388.1;locus_tag=NM058_08890;product=cysteine hydrolase;protein_id=UTX06576.1;transl_table=11 CP101611.1 Genbank gene 1710002 1710766 . + . ID=gene-NM058_08895;Name=NM058_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08895 CP101611.1 Protein Homology CDS 1710002 1710766 . + 0 ID=cds-UTX06577.1;Parent=gene-NM058_08895;Dbxref=NCBI_GP:UTX06577.1;Name=UTX06577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388389.1;locus_tag=NM058_08895;product=MBL fold metallo-hydrolase;protein_id=UTX06577.1;transl_table=11 CP101611.1 Genbank gene 1710989 1712293 . + . ID=gene-NM058_08900;Name=NM058_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08900 CP101611.1 Protein Homology CDS 1710989 1712293 . + 0 ID=cds-UTX06578.1;Parent=gene-NM058_08900;Dbxref=NCBI_GP:UTX06578.1;Name=UTX06578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258953.1;locus_tag=NM058_08900;product=MFS transporter;protein_id=UTX06578.1;transl_table=11 CP101611.1 Genbank gene 1712541 1713755 . + . ID=gene-NM058_08905;Name=NM058_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08905 CP101611.1 Protein Homology CDS 1712541 1713755 . + 0 ID=cds-UTX06579.1;Parent=gene-NM058_08905;Dbxref=NCBI_GP:UTX06579.1;Name=UTX06579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003237139.1;locus_tag=NM058_08905;product=MFS transporter;protein_id=UTX06579.1;transl_table=11 CP101611.1 Genbank gene 1713881 1715031 . + . ID=gene-NM058_08910;Name=NM058_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08910 CP101611.1 Protein Homology CDS 1713881 1714154 . + 0 ID=cds-UTX06580.1;Parent=gene-NM058_08910;Dbxref=NCBI_GP:UTX06580.1;Name=UTX06580.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611387.1;locus_tag=NM058_08910;product=IS3 family transposase;protein_id=UTX06580.1;transl_table=11 CP101611.1 Protein Homology CDS 1714154 1715031 . + 2 ID=cds-UTX06580.1;Parent=gene-NM058_08910;Dbxref=NCBI_GP:UTX06580.1;Name=UTX06580.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611387.1;locus_tag=NM058_08910;product=IS3 family transposase;protein_id=UTX06580.1;transl_table=11 CP101611.1 Genbank pseudogene 1715170 1715348 . + . ID=gene-NM058_08915;Name=NM058_08915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08915;pseudo=true CP101611.1 Protein Homology CDS 1715170 1715348 . + 0 ID=cds-NM058_08915;Parent=gene-NM058_08915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390517.1;locus_tag=NM058_08915;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1715306 1715474 . + . ID=gene-NM058_08920;Name=NM058_08920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08920;pseudo=true CP101611.1 Protein Homology CDS 1715306 1715474 . + 0 ID=cds-NM058_08920;Parent=gene-NM058_08920;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390454.2;locus_tag=NM058_08920;product=recombinase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1715603 1716329 . - . ID=gene-NM058_08925;Name=sigK;gbkey=Gene;gene=sigK;gene_biotype=pseudogene;locus_tag=NM058_08925;pseudo=true CP101611.1 Protein Homology CDS 1715603 1716329 . - 0 ID=cds-NM058_08925;Parent=gene-NM058_08925;Note=frameshifted;Ontology_term=GO:0006352,GO:0042173,GO:0016987;gbkey=CDS;gene=sigK;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,regulation of sporulation resulting in formation of a cellular spore|0042173||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003237137.1;locus_tag=NM058_08925;product=RNA polymerase sporulation sigma factor SigK;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1716523 1716931 . + . ID=gene-NM058_08930;Name=NM058_08930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_08930;pseudo=true CP101611.1 Protein Homology CDS 1716523 1716931 . + 0 ID=cds-NM058_08930;Parent=gene-NM058_08930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390452.1;locus_tag=NM058_08930;product=NucA/NucB deoxyribonuclease domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1716964 1717686 . - . ID=gene-NM058_08935;Name=NM058_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08935 CP101611.1 Protein Homology CDS 1716964 1717686 . - 0 ID=cds-UTX07002.1;Parent=gene-NM058_08935;Dbxref=NCBI_GP:UTX07002.1;Name=UTX07002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014114485.1;locus_tag=NM058_08935;product=DUF308 domain-containing protein;protein_id=UTX07002.1;transl_table=11 CP101611.1 Genbank gene 1718000 1718938 . + . ID=gene-NM058_08940;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=NM058_08940 CP101611.1 Protein Homology CDS 1718000 1718938 . + 0 ID=cds-UTX06581.1;Parent=gene-NM058_08940;Dbxref=NCBI_GP:UTX06581.1;Name=UTX06581.1;Ontology_term=GO:0006098,GO:0004616;gbkey=CDS;gene=gnd;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003353957.1;locus_tag=NM058_08940;product=decarboxylating 6-phosphogluconate dehydrogenase;protein_id=UTX06581.1;transl_table=11 CP101611.1 Genbank gene 1718911 1719537 . - . ID=gene-NM058_08945;Name=NM058_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08945 CP101611.1 Protein Homology CDS 1718911 1719537 . - 0 ID=cds-UTX06582.1;Parent=gene-NM058_08945;Dbxref=NCBI_GP:UTX06582.1;Name=UTX06582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390449.1;locus_tag=NM058_08945;product=TVP38/TMEM64 family protein;protein_id=UTX06582.1;transl_table=11 CP101611.1 Genbank gene 1719732 1720484 . + . ID=gene-NM058_08950;Name=NM058_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08950 CP101611.1 Protein Homology CDS 1719732 1720484 . + 0 ID=cds-UTX06583.1;Parent=gene-NM058_08950;Dbxref=NCBI_GP:UTX06583.1;Name=UTX06583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390448.1;locus_tag=NM058_08950;product=N-acetylmuramoyl-L-alanine amidase;protein_id=UTX06583.1;transl_table=11 CP101611.1 Genbank gene 1720736 1721467 . + . ID=gene-NM058_08955;Name=NM058_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08955 CP101611.1 Protein Homology CDS 1720736 1721467 . + 0 ID=cds-UTX06584.1;Parent=gene-NM058_08955;Dbxref=NCBI_GP:UTX06584.1;Name=UTX06584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390447.1;locus_tag=NM058_08955;product=SGNH/GDSL hydrolase family protein;protein_id=UTX06584.1;transl_table=11 CP101611.1 Genbank gene 1721813 1721953 . - . ID=gene-NM058_08960;Name=NM058_08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08960 CP101611.1 Protein Homology CDS 1721813 1721953 . - 0 ID=cds-UTX06585.1;Parent=gene-NM058_08960;Dbxref=NCBI_GP:UTX06585.1;Name=UTX06585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006637642.1;locus_tag=NM058_08960;product=sporulation histidine kinase inhibitor Sda;protein_id=UTX06585.1;transl_table=11 CP101611.1 Genbank gene 1722315 1722833 . + . ID=gene-NM058_08965;Name=NM058_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08965 CP101611.1 Protein Homology CDS 1722315 1722833 . + 0 ID=cds-UTX06586.1;Parent=gene-NM058_08965;Dbxref=NCBI_GP:UTX06586.1;Name=UTX06586.1;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390446.1;locus_tag=NM058_08965;product=YqeG family HAD IIIA-type phosphatase;protein_id=UTX06586.1;transl_table=11 CP101611.1 Genbank gene 1722837 1723937 . + . ID=gene-NM058_08970;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=NM058_08970 CP101611.1 Protein Homology CDS 1722837 1723937 . + 0 ID=cds-UTX06587.1;Parent=gene-NM058_08970;Dbxref=NCBI_GP:UTX06587.1;Name=UTX06587.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390445.1;locus_tag=NM058_08970;product=ribosome biogenesis GTPase YqeH;protein_id=UTX06587.1;transl_table=11 CP101611.1 Genbank gene 1723956 1724798 . + . ID=gene-NM058_08975;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=NM058_08975 CP101611.1 Protein Homology CDS 1723956 1724798 . + 0 ID=cds-UTX06588.1;Parent=gene-NM058_08975;Dbxref=NCBI_GP:UTX06588.1;Name=UTX06588.1;Ontology_term=GO:0009423,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390444.2;locus_tag=NM058_08975;product=shikimate dehydrogenase;protein_id=UTX06588.1;transl_table=11 CP101611.1 Genbank gene 1724792 1725082 . + . ID=gene-NM058_08980;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=NM058_08980 CP101611.1 Protein Homology CDS 1724792 1725082 . + 0 ID=cds-UTX06589.1;Parent=gene-NM058_08980;Dbxref=NCBI_GP:UTX06589.1;Name=UTX06589.1;Ontology_term=GO:0008150,GO:0003723,GO:0005737;gbkey=CDS;gene=yhbY;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390443.1;locus_tag=NM058_08980;product=ribosome assembly RNA-binding protein YhbY;protein_id=UTX06589.1;transl_table=11 CP101611.1 Genbank gene 1725094 1725663 . + . ID=gene-NM058_08985;Name=NM058_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_08985 CP101611.1 Protein Homology CDS 1725094 1725663 . + 0 ID=cds-UTX06590.1;Parent=gene-NM058_08985;Dbxref=NCBI_GP:UTX06590.1;Name=UTX06590.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390442.1;locus_tag=NM058_08985;product=nicotinate-nucleotide adenylyltransferase;protein_id=UTX06590.1;transl_table=11 CP101611.1 Genbank gene 1725653 1726213 . + . ID=gene-NM058_08990;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=NM058_08990 CP101611.1 Protein Homology CDS 1725653 1726213 . + 0 ID=cds-UTX06591.1;Parent=gene-NM058_08990;Dbxref=NCBI_GP:UTX06591.1;Name=UTX06591.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390441.1;locus_tag=NM058_08990;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=UTX06591.1;transl_table=11 CP101611.1 Genbank gene 1726231 1726587 . + . ID=gene-NM058_08995;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=NM058_08995 CP101611.1 Protein Homology CDS 1726231 1726587 . + 0 ID=cds-UTX06592.1;Parent=gene-NM058_08995;Dbxref=NCBI_GP:UTX06592.1;Name=UTX06592.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390440.1;locus_tag=NM058_08995;product=ribosome silencing factor;protein_id=UTX06592.1;transl_table=11 CP101611.1 Genbank gene 1726584 1727327 . + . ID=gene-NM058_09000;Name=NM058_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09000 CP101611.1 Protein Homology CDS 1726584 1727327 . + 0 ID=cds-UTX06593.1;Parent=gene-NM058_09000;Dbxref=NCBI_GP:UTX06593.1;Name=UTX06593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390439.1;locus_tag=NM058_09000;product=methyltransferase domain-containing protein;protein_id=UTX06593.1;transl_table=11 CP101611.1 Genbank pseudogene 1727393 1728213 . - . ID=gene-NM058_09005;Name=comER;gbkey=Gene;gene=comER;gene_biotype=pseudogene;locus_tag=NM058_09005;pseudo=true CP101611.1 Protein Homology CDS 1727393 1728213 . - 0 ID=cds-NM058_09005;Parent=gene-NM058_09005;Note=frameshifted;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=comER;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390438.1;locus_tag=NM058_09005;product=late competence protein ComER;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1728297 1728914 . + . ID=gene-NM058_09010;Name=NM058_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09010 CP101611.1 Protein Homology CDS 1728297 1728914 . + 0 ID=cds-UTX06594.1;Parent=gene-NM058_09010;Dbxref=NCBI_GP:UTX06594.1;Name=UTX06594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390437.1;locus_tag=NM058_09010;product=helix-hairpin-helix domain-containing protein;protein_id=UTX06594.1;transl_table=11 CP101611.1 Genbank gene 1728981 1729550 . + . ID=gene-NM058_09015;Name=NM058_09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09015 CP101611.1 Protein Homology CDS 1728981 1729550 . + 0 ID=cds-UTX06595.1;Parent=gene-NM058_09015;Dbxref=NCBI_GP:UTX06595.1;Name=UTX06595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390436.1;locus_tag=NM058_09015;product=ComE operon protein 2;protein_id=UTX06595.1;transl_table=11 CP101611.1 Genbank pseudogene 1729554 1731883 . + . ID=gene-NM058_09020;Name=NM058_09020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09020;pseudo=true CP101611.1 Protein Homology CDS 1729554 1731883 . + 0 ID=cds-NM058_09020;Parent=gene-NM058_09020;Note=frameshifted;Ontology_term=GO:0009290,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390435.1;locus_tag=NM058_09020;product=DNA internalization-related competence protein ComEC/Rec2;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1731923 1732057 . - . ID=gene-NM058_09025;Name=NM058_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09025 CP101611.1 Protein Homology CDS 1731923 1732057 . - 0 ID=cds-UTX06596.1;Parent=gene-NM058_09025;Dbxref=NCBI_GP:UTX06596.1;Name=UTX06596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097762.1;locus_tag=NM058_09025;product=YqzM family protein;protein_id=UTX06596.1;transl_table=11 CP101611.1 Genbank gene 1732098 1732247 . + . ID=gene-NM058_09030;Name=NM058_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09030 CP101611.1 Protein Homology CDS 1732098 1732247 . + 0 ID=cds-UTX06597.1;Parent=gene-NM058_09030;Dbxref=NCBI_GP:UTX06597.1;Name=UTX06597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513978.1;locus_tag=NM058_09030;product=hypothetical protein;protein_id=UTX06597.1;transl_table=11 CP101611.1 Genbank gene 1732287 1733330 . + . ID=gene-NM058_09035;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=NM058_09035 CP101611.1 Protein Homology CDS 1732287 1733330 . + 0 ID=cds-UTX06598.1;Parent=gene-NM058_09035;Dbxref=NCBI_GP:UTX06598.1;Name=UTX06598.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390434.1;locus_tag=NM058_09035;product=DNA polymerase III subunit delta;protein_id=UTX06598.1;transl_table=11 CP101611.1 Genbank gene 1733345 1733611 . - . ID=gene-NM058_09040;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=NM058_09040 CP101611.1 Protein Homology CDS 1733345 1733611 . - 0 ID=cds-UTX06599.1;Parent=gene-NM058_09040;Dbxref=NCBI_GP:UTX06599.1;Name=UTX06599.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390433.2;locus_tag=NM058_09040;product=30S ribosomal protein S20;protein_id=UTX06599.1;transl_table=11 CP101611.1 Genbank pseudogene 1733814 1734919 . + . ID=gene-NM058_09045;Name=gpr;gbkey=Gene;gene=gpr;gene_biotype=pseudogene;locus_tag=NM058_09045;pseudo=true CP101611.1 Protein Homology CDS 1733814 1734919 . + 0 ID=cds-NM058_09045;Parent=gene-NM058_09045;Note=frameshifted;Ontology_term=GO:0030436,GO:0004175;gbkey=CDS;gene=gpr;go_function=endopeptidase activity|0004175||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390432.1;locus_tag=NM058_09045;product=GPR endopeptidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1734982 1736187 . + . ID=gene-NM058_09050;Name=spoIIP;gbkey=Gene;gene=spoIIP;gene_biotype=protein_coding;locus_tag=NM058_09050 CP101611.1 Protein Homology CDS 1734982 1736187 . + 0 ID=cds-UTX06600.1;Parent=gene-NM058_09050;Dbxref=NCBI_GP:UTX06600.1;Name=UTX06600.1;gbkey=CDS;gene=spoIIP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390431.1;locus_tag=NM058_09050;product=spore autolysin SpoIIP;protein_id=UTX06600.1;transl_table=11 CP101611.1 Genbank gene 1736204 1736542 . + . ID=gene-NM058_09055;Name=NM058_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09055 CP101611.1 Protein Homology CDS 1736204 1736542 . + 0 ID=cds-UTX06601.1;Parent=gene-NM058_09055;Dbxref=NCBI_GP:UTX06601.1;Name=UTX06601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390430.1;locus_tag=NM058_09055;product=YqxA family protein;protein_id=UTX06601.1;transl_table=11 CP101611.1 Genbank gene 1736675 1738513 . + . ID=gene-NM058_09060;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=NM058_09060 CP101611.1 Protein Homology CDS 1736675 1738513 . + 0 ID=cds-UTX06602.1;Parent=gene-NM058_09060;Dbxref=NCBI_GP:UTX06602.1;Name=UTX06602.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390429.1;locus_tag=NM058_09060;product=translation elongation factor 4;protein_id=UTX06602.1;transl_table=11 CP101611.1 Genbank pseudogene 1738566 1739704 . + . ID=gene-NM058_09065;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=pseudogene;locus_tag=NM058_09065;pseudo=true CP101611.1 Protein Homology CDS 1738566 1739704 . + 0 ID=cds-NM058_09065;Parent=gene-NM058_09065;Note=frameshifted;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390428.2;locus_tag=NM058_09065;product=radical SAM family heme chaperone HemW;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1739785 1740816 . + . ID=gene-NM058_09070;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=NM058_09070 CP101611.1 Protein Homology CDS 1739785 1740816 . + 0 ID=cds-UTX07003.1;Parent=gene-NM058_09070;Dbxref=NCBI_GP:UTX07003.1;Name=UTX07003.1;Ontology_term=GO:0009408,GO:0005737;gbkey=CDS;gene=hrcA;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390427.1;locus_tag=NM058_09070;product=heat-inducible transcriptional repressor HrcA;protein_id=UTX07003.1;transl_table=11 CP101611.1 Genbank pseudogene 1740888 1741449 . + . ID=gene-NM058_09075;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=pseudogene;locus_tag=NM058_09075;pseudo=true CP101611.1 Protein Homology CDS 1740888 1741449 . + 0 ID=cds-NM058_09075;Parent=gene-NM058_09075;Note=frameshifted;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390426.1;locus_tag=NM058_09075;product=nucleotide exchange factor GrpE;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1741473 1743308 . + . ID=gene-NM058_09080;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=NM058_09080 CP101611.1 Protein Homology CDS 1741473 1743308 . + 0 ID=cds-UTX06603.1;Parent=gene-NM058_09080;Dbxref=NCBI_GP:UTX06603.1;Name=UTX06603.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390425.1;locus_tag=NM058_09080;product=molecular chaperone DnaK;protein_id=UTX06603.1;transl_table=11 CP101611.1 Genbank pseudogene 1743507 1744632 . + . ID=gene-NM058_09085;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=pseudogene;locus_tag=NM058_09085;pseudo=true CP101611.1 Protein Homology CDS 1743507 1744632 . + 0 ID=cds-NM058_09085;Parent=gene-NM058_09085;Note=frameshifted;Ontology_term=GO:0006457,GO:0009408,GO:0005524,GO:0031072,GO:0051082;gbkey=CDS;gene=dnaJ;go_function=ATP binding|0005524||IEA,heat shock protein binding|0031072||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390424.2;locus_tag=NM058_09085;product=molecular chaperone DnaJ;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1744657 1745592 . + . ID=gene-NM058_09090;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=NM058_09090 CP101611.1 Protein Homology CDS 1744657 1745592 . + 0 ID=cds-UTX06604.1;Parent=gene-NM058_09090;Dbxref=NCBI_GP:UTX06604.1;Name=UTX06604.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390423.2;locus_tag=NM058_09090;product=50S ribosomal protein L11 methyltransferase;protein_id=UTX06604.1;transl_table=11 CP101611.1 Genbank gene 1745615 1746385 . + . ID=gene-NM058_09095;Name=NM058_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09095 CP101611.1 Protein Homology CDS 1745615 1746385 . + 0 ID=cds-UTX06605.1;Parent=gene-NM058_09095;Dbxref=NCBI_GP:UTX06605.1;Name=UTX06605.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390422.1;locus_tag=NM058_09095;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=UTX06605.1;transl_table=11 CP101611.1 Genbank gene 1746385 1747737 . + . ID=gene-NM058_09100;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=NM058_09100 CP101611.1 Protein Homology CDS 1746385 1747737 . + 0 ID=cds-UTX06606.1;Parent=gene-NM058_09100;Dbxref=NCBI_GP:UTX06606.1;Name=UTX06606.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390421.1;locus_tag=NM058_09100;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=UTX06606.1;transl_table=11 CP101611.1 Genbank gene 1747772 1748695 . - . ID=gene-NM058_09105;Name=NM058_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09105 CP101611.1 Protein Homology CDS 1747772 1748695 . - 0 ID=cds-UTX07004.1;Parent=gene-NM058_09105;Dbxref=NCBI_GP:UTX07004.1;Name=UTX07004.1;Ontology_term=GO:0035435,GO:0044341,GO:0005436,GO:0015114,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA,phosphate ion transmembrane transporter activity|0015114||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA,sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390420.2;locus_tag=NM058_09105;product=Na/Pi symporter;protein_id=UTX07004.1;transl_table=11 CP101611.1 Genbank gene 1748868 1749041 . + . ID=gene-NM058_09110;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=NM058_09110 CP101611.1 Protein Homology CDS 1748868 1749041 . + 0 ID=cds-UTX06607.1;Parent=gene-NM058_09110;Dbxref=NCBI_GP:UTX06607.1;Name=UTX06607.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390419.1;locus_tag=NM058_09110;product=30S ribosomal protein S21;protein_id=UTX06607.1;transl_table=11 CP101611.1 Genbank gene 1749056 1749502 . + . ID=gene-NM058_09115;Name=NM058_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09115 CP101611.1 Protein Homology CDS 1749056 1749502 . + 0 ID=cds-UTX06608.1;Parent=gene-NM058_09115;Dbxref=NCBI_GP:UTX06608.1;Name=UTX06608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390418.1;locus_tag=NM058_09115;product=GatB/YqeY domain-containing protein;protein_id=UTX06608.1;transl_table=11 CP101611.1 Genbank gene 1749633 1750946 . + . ID=gene-NM058_09120;Name=NM058_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09120 CP101611.1 Protein Homology CDS 1749633 1750946 . + 0 ID=cds-UTX06609.1;Parent=gene-NM058_09120;Dbxref=NCBI_GP:UTX06609.1;Name=UTX06609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390417.1;locus_tag=NM058_09120;product=nodulation protein NfeD;protein_id=UTX06609.1;transl_table=11 CP101611.1 Genbank gene 1750968 1751963 . + . ID=gene-NM058_09125;Name=floA;gbkey=Gene;gene=floA;gene_biotype=protein_coding;locus_tag=NM058_09125 CP101611.1 Protein Homology CDS 1750968 1751963 . + 0 ID=cds-UTX06610.1;Parent=gene-NM058_09125;Dbxref=NCBI_GP:UTX06610.1;Name=UTX06610.1;gbkey=CDS;gene=floA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390416.1;locus_tag=NM058_09125;product=flotillin-like protein FloA;protein_id=UTX06610.1;transl_table=11 CP101611.1 Genbank gene 1751988 1752404 . + . ID=gene-NM058_09130;Name=NM058_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09130 CP101611.1 Protein Homology CDS 1751988 1752404 . + 0 ID=cds-UTX06611.1;Parent=gene-NM058_09130;Dbxref=NCBI_GP:UTX06611.1;Name=UTX06611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390415.2;locus_tag=NM058_09130;product=hypothetical protein;protein_id=UTX06611.1;transl_table=11 CP101611.1 Genbank gene 1752461 1752742 . + . ID=gene-NM058_09135;Name=yqfC;gbkey=Gene;gene=yqfC;gene_biotype=protein_coding;locus_tag=NM058_09135 CP101611.1 Protein Homology CDS 1752461 1752742 . + 0 ID=cds-UTX06612.1;Parent=gene-NM058_09135;Dbxref=NCBI_GP:UTX06612.1;Name=UTX06612.1;Ontology_term=GO:0030436,GO:0003674,GO:0005575;gbkey=CDS;gene=yqfC;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390414.1;locus_tag=NM058_09135;product=sporulation protein YqfC;protein_id=UTX06612.1;transl_table=11 CP101611.1 Genbank pseudogene 1752761 1753956 . + . ID=gene-NM058_09140;Name=yqfD;gbkey=Gene;gene=yqfD;gene_biotype=pseudogene;locus_tag=NM058_09140;pseudo=true CP101611.1 Protein Homology CDS 1752761 1753956 . + 0 ID=cds-NM058_09140;Parent=gene-NM058_09140;Note=frameshifted;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=yqfD;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390413.2;locus_tag=NM058_09140;product=sporulation protein YqfD;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1753953 1754912 . + . ID=gene-NM058_09145;Name=NM058_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09145 CP101611.1 Protein Homology CDS 1753953 1754912 . + 0 ID=cds-UTX06613.1;Parent=gene-NM058_09145;Dbxref=NCBI_GP:UTX06613.1;Name=UTX06613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390412.2;locus_tag=NM058_09145;product=PhoH family protein;protein_id=UTX06613.1;transl_table=11 CP101611.1 Genbank pseudogene 1754991 1757125 . + . ID=gene-NM058_09150;Name=pgpH;gbkey=Gene;gene=pgpH;gene_biotype=pseudogene;locus_tag=NM058_09150;pseudo=true CP101611.1 Protein Homology CDS 1754991 1757125 . + 0 ID=cds-NM058_09150;Parent=gene-NM058_09150;Note=frameshifted;gbkey=CDS;gene=pgpH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390411.1;locus_tag=NM058_09150;product=cyclic-di-AMP phosphodiesterase PgpH;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1757126 1757599 . + . ID=gene-NM058_09155;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=NM058_09155 CP101611.1 Protein Homology CDS 1757126 1757599 . + 0 ID=cds-UTX06614.1;Parent=gene-NM058_09155;Dbxref=NCBI_GP:UTX06614.1;Name=UTX06614.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390410.2;locus_tag=NM058_09155;product=rRNA maturation RNase YbeY;protein_id=UTX06614.1;transl_table=11 CP101611.1 Genbank gene 1757580 1757951 . + . ID=gene-NM058_09160;Name=NM058_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09160 CP101611.1 Protein Homology CDS 1757580 1757951 . + 0 ID=cds-UTX06615.1;Parent=gene-NM058_09160;Dbxref=NCBI_GP:UTX06615.1;Name=UTX06615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390409.2;locus_tag=NM058_09160;product=diacylglycerol kinase family protein;protein_id=UTX06615.1;transl_table=11 CP101611.1 Genbank gene 1758072 1758482 . + . ID=gene-NM058_09165;Name=NM058_09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09165 CP101611.1 Protein Homology CDS 1758072 1758482 . + 0 ID=cds-UTX06616.1;Parent=gene-NM058_09165;Dbxref=NCBI_GP:UTX06616.1;Name=UTX06616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003237067.1;locus_tag=NM058_09165;product=cytidine deaminase;protein_id=UTX06616.1;transl_table=11 CP101611.1 Genbank gene 1758463 1759368 . + . ID=gene-NM058_09170;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=NM058_09170 CP101611.1 Protein Homology CDS 1758463 1759368 . + 0 ID=cds-UTX06617.1;Parent=gene-NM058_09170;Dbxref=NCBI_GP:UTX06617.1;Name=UTX06617.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390407.1;locus_tag=NM058_09170;product=GTPase Era;protein_id=UTX06617.1;transl_table=11 CP101611.1 Genbank gene 1759512 1759655 . + . ID=gene-NM058_09175;Name=NM058_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09175 CP101611.1 Protein Homology CDS 1759512 1759655 . + 0 ID=cds-UTX06618.1;Parent=gene-NM058_09175;Dbxref=NCBI_GP:UTX06618.1;Name=UTX06618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097761.1;locus_tag=NM058_09175;product=YqzL family protein;protein_id=UTX06618.1;transl_table=11 CP101611.1 Genbank gene 1759692 1760459 . + . ID=gene-NM058_09180;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=NM058_09180 CP101611.1 Protein Homology CDS 1759692 1760459 . + 0 ID=cds-UTX06619.1;Parent=gene-NM058_09180;Dbxref=NCBI_GP:UTX06619.1;Name=UTX06619.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390406.2;locus_tag=NM058_09180;product=DNA repair protein RecO;protein_id=UTX06619.1;transl_table=11 CP101611.1 Genbank gene 1760757 1761644 . + . ID=gene-NM058_09185;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=NM058_09185 CP101611.1 Protein Homology CDS 1760757 1761644 . + 0 ID=cds-UTX07005.1;Parent=gene-NM058_09185;Dbxref=NCBI_GP:UTX07005.1;Name=UTX07005.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390405.1;locus_tag=NM058_09185;product=glycine--tRNA ligase subunit alpha;protein_id=UTX07005.1;transl_table=11 CP101611.1 Genbank pseudogene 1761637 1763675 . + . ID=gene-NM058_09190;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=pseudogene;locus_tag=NM058_09190;pseudo=true CP101611.1 Protein Homology CDS 1761637 1763675 . + 0 ID=cds-NM058_09190;Parent=gene-NM058_09190;Note=frameshifted;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390404.2;locus_tag=NM058_09190;product=glycine--tRNA ligase subunit beta;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1763809 1764447 . + . ID=gene-NM058_09195;Name=ccpN;gbkey=Gene;gene=ccpN;gene_biotype=protein_coding;locus_tag=NM058_09195 CP101611.1 Protein Homology CDS 1763809 1764447 . + 0 ID=cds-UTX07006.1;Parent=gene-NM058_09195;Dbxref=NCBI_GP:UTX07006.1;Name=UTX07006.1;gbkey=CDS;gene=ccpN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390403.1;locus_tag=NM058_09195;product=transcriptional regulator CcpN;protein_id=UTX07006.1;transl_table=11 CP101611.1 Genbank gene 1764473 1765285 . + . ID=gene-NM058_09200;Name=NM058_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09200 CP101611.1 Protein Homology CDS 1764473 1765285 . + 0 ID=cds-UTX06620.1;Parent=gene-NM058_09200;Dbxref=NCBI_GP:UTX06620.1;Name=UTX06620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390402.1;locus_tag=NM058_09200;product=kinase/pyrophosphorylase;protein_id=UTX06620.1;transl_table=11 CP101611.1 Genbank gene 1765539 1766033 . + . ID=gene-NM058_09205;Name=NM058_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09205 CP101611.1 Protein Homology CDS 1765539 1766033 . + 0 ID=cds-UTX06621.1;Parent=gene-NM058_09205;Dbxref=NCBI_GP:UTX06621.1;Name=UTX06621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390401.2;locus_tag=NM058_09205;product=YaiI/YqxD family protein;protein_id=UTX06621.1;transl_table=11 CP101611.1 Genbank gene 1766067 1767881 . + . ID=gene-NM058_09210;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=NM058_09210 CP101611.1 Protein Homology CDS 1766067 1767881 . + 0 ID=cds-UTX06622.1;Parent=gene-NM058_09210;Dbxref=NCBI_GP:UTX06622.1;Name=UTX06622.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390400.2;locus_tag=NM058_09210;product=DNA primase;protein_id=UTX06622.1;transl_table=11 CP101611.1 Genbank gene 1768081 1769196 . + . ID=gene-NM058_09215;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=NM058_09215 CP101611.1 Protein Homology CDS 1768081 1769196 . + 0 ID=cds-UTX06623.1;Parent=gene-NM058_09215;Dbxref=NCBI_GP:UTX06623.1;Name=UTX06623.1;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390399.2;locus_tag=NM058_09215;product=RNA polymerase sigma factor RpoD;protein_id=UTX06623.1;transl_table=11 CP101611.1 Genbank gene 1769524 1769886 . + . ID=gene-NM058_09220;Name=cccA;gbkey=Gene;gene=cccA;gene_biotype=protein_coding;locus_tag=NM058_09220 CP101611.1 Protein Homology CDS 1769524 1769886 . + 0 ID=cds-UTX06624.1;Parent=gene-NM058_09220;Dbxref=NCBI_GP:UTX06624.1;Name=UTX06624.1;gbkey=CDS;gene=cccA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390398.1;locus_tag=NM058_09220;product=cytochrome c-550;protein_id=UTX06624.1;transl_table=11 CP101611.1 Genbank gene 1770143 1770793 . + . ID=gene-NM058_09225;Name=trmK;gbkey=Gene;gene=trmK;gene_biotype=protein_coding;locus_tag=NM058_09225 CP101611.1 Protein Homology CDS 1770143 1770793 . + 0 ID=cds-UTX07007.1;Parent=gene-NM058_09225;Dbxref=NCBI_GP:UTX07007.1;Name=UTX07007.1;Ontology_term=GO:0030488,GO:0016429;gbkey=CDS;gene=trmK;go_function=tRNA (adenine-N1-)-methyltransferase activity|0016429||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390397.1;locus_tag=NM058_09225;product=tRNA (adenine(22)-N(1))-methyltransferase TrmK;protein_id=UTX07007.1;transl_table=11 CP101611.1 Genbank gene 1770786 1771907 . + . ID=gene-NM058_09230;Name=NM058_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09230 CP101611.1 Protein Homology CDS 1770786 1771907 . + 0 ID=cds-UTX06625.1;Parent=gene-NM058_09230;Dbxref=NCBI_GP:UTX06625.1;Name=UTX06625.1;Ontology_term=GO:0008150,GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390396.1;locus_tag=NM058_09230;product=Nif3-like dinuclear metal center hexameric protein;protein_id=UTX06625.1;transl_table=11 CP101611.1 Genbank gene 1771930 1772874 . - . ID=gene-NM058_09235;Name=NM058_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09235 CP101611.1 Protein Homology CDS 1771930 1772874 . - 0 ID=cds-UTX06626.1;Parent=gene-NM058_09235;Dbxref=NCBI_GP:UTX06626.1;Name=UTX06626.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390395.2;locus_tag=NM058_09235;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=UTX06626.1;transl_table=11 CP101611.1 Genbank gene 1772996 1773718 . - . ID=gene-NM058_09240;Name=NM058_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09240 CP101611.1 Protein Homology CDS 1772996 1773718 . - 0 ID=cds-UTX06627.1;Parent=gene-NM058_09240;Dbxref=NCBI_GP:UTX06627.1;Name=UTX06627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390394.1;locus_tag=NM058_09240;product=YqfQ family protein;protein_id=UTX06627.1;transl_table=11 CP101611.1 Genbank gene 1773887 1775203 . + . ID=gene-NM058_09245;Name=cshB;gbkey=Gene;gene=cshB;gene_biotype=protein_coding;locus_tag=NM058_09245 CP101611.1 Protein Homology CDS 1773887 1775203 . + 0 ID=cds-UTX06628.1;Parent=gene-NM058_09245;Dbxref=NCBI_GP:UTX06628.1;Name=UTX06628.1;gbkey=CDS;gene=cshB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390393.1;locus_tag=NM058_09245;product=DEAD-box ATP-dependent RNA helicase CshB;protein_id=UTX06628.1;transl_table=11 CP101611.1 Genbank gene 1775213 1776106 . + . ID=gene-NM058_09250;Name=NM058_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09250 CP101611.1 Protein Homology CDS 1775213 1776106 . + 0 ID=cds-UTX06629.1;Parent=gene-NM058_09250;Dbxref=NCBI_GP:UTX06629.1;Name=UTX06629.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390392.1;locus_tag=NM058_09250;product=deoxyribonuclease IV;protein_id=UTX06629.1;transl_table=11 CP101611.1 Genbank gene 1776133 1776387 . - . ID=gene-NM058_09255;Name=NM058_09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09255 CP101611.1 Protein Homology CDS 1776133 1776387 . - 0 ID=cds-UTX06630.1;Parent=gene-NM058_09255;Dbxref=NCBI_GP:UTX06630.1;Name=UTX06630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390391.1;locus_tag=NM058_09255;product=DUF2624 domain-containing protein;protein_id=UTX06630.1;transl_table=11 CP101611.1 Genbank pseudogene 1776503 1777383 . + . ID=gene-NM058_09260;Name=NM058_09260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09260;pseudo=true CP101611.1 Protein Homology CDS 1776503 1777383 . + 0 ID=cds-NM058_09260;Parent=gene-NM058_09260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390390.2;locus_tag=NM058_09260;product=YitT family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1777521 1777958 . + . ID=gene-NM058_09265;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=NM058_09265 CP101611.1 Protein Homology CDS 1777521 1777958 . + 0 ID=cds-UTX06631.1;Parent=gene-NM058_09265;Dbxref=NCBI_GP:UTX06631.1;Name=UTX06631.1;gbkey=CDS;gene=zur;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390389.2;locus_tag=NM058_09265;product=zinc uptake transcriptional repressor Zur;protein_id=UTX06631.1;transl_table=11 CP101611.1 Genbank gene 1778000 1778581 . - . ID=gene-NM058_09270;Name=NM058_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09270 CP101611.1 Protein Homology CDS 1778000 1778581 . - 0 ID=cds-UTX06632.1;Parent=gene-NM058_09270;Dbxref=NCBI_GP:UTX06632.1;Name=UTX06632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390388.1;locus_tag=NM058_09270;product=hypothetical protein;protein_id=UTX06632.1;transl_table=11 CP101611.1 Genbank gene 1778715 1779104 . + . ID=gene-NM058_09275;Name=NM058_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09275 CP101611.1 Protein Homology CDS 1778715 1779104 . + 0 ID=cds-UTX06633.1;Parent=gene-NM058_09275;Dbxref=NCBI_GP:UTX06633.1;Name=UTX06633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390387.1;locus_tag=NM058_09275;product=DUF308 domain-containing protein;protein_id=UTX06633.1;transl_table=11 CP101611.1 Genbank pseudogene 1779130 1780262 . - . ID=gene-NM058_09280;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=pseudogene;gene_synonym=gcpE;locus_tag=NM058_09280;pseudo=true CP101611.1 Protein Homology CDS 1779130 1780262 . - 0 ID=cds-NM058_09280;Parent=gene-NM058_09280;Note=frameshifted;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390386.1;locus_tag=NM058_09280;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1780384 1780683 . - . ID=gene-NM058_09285;Name=NM058_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09285 CP101611.1 Protein Homology CDS 1780384 1780683 . - 0 ID=cds-UTX06634.1;Parent=gene-NM058_09285;Dbxref=NCBI_GP:UTX06634.1;Name=UTX06634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390385.1;locus_tag=NM058_09285;product=LysM domain-containing protein;protein_id=UTX06634.1;transl_table=11 CP101611.1 Genbank gene 1780778 1781539 . - . ID=gene-NM058_09290;Name=NM058_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09290 CP101611.1 Protein Homology CDS 1780778 1781539 . - 0 ID=cds-UTX06635.1;Parent=gene-NM058_09290;Dbxref=NCBI_GP:UTX06635.1;Name=UTX06635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003237022.1;locus_tag=NM058_09290;product=DUF1189 domain-containing protein;protein_id=UTX06635.1;transl_table=11 CP101611.1 Genbank gene 1781650 1782132 . + . ID=gene-NM058_09295;Name=NM058_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09295 CP101611.1 Protein Homology CDS 1781650 1782132 . + 0 ID=cds-UTX06636.1;Parent=gene-NM058_09295;Dbxref=NCBI_GP:UTX06636.1;Name=UTX06636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390382.1;locus_tag=NM058_09295;product=DUF456 domain-containing protein;protein_id=UTX06636.1;transl_table=11 CP101611.1 Genbank pseudogene 1782312 1782919 . + . ID=gene-NM058_09300;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=pseudogene;locus_tag=NM058_09300;pseudo=true CP101611.1 Protein Homology CDS 1782312 1782919 . + 0 ID=cds-NM058_09300;Parent=gene-NM058_09300;Note=frameshifted;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390381.3;locus_tag=NM058_09300;product=superoxide dismutase SodA;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1783027 1784318 . + . ID=gene-NM058_09305;Name=NM058_09305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09305;pseudo=true CP101611.1 Protein Homology CDS 1783027 1784318 . + 0 ID=cds-NM058_09305;Parent=gene-NM058_09305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390380.2;locus_tag=NM058_09305;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1784431 1786584 . + . ID=gene-NM058_09310;Name=pbpA;gbkey=Gene;gene=pbpA;gene_biotype=protein_coding;locus_tag=NM058_09310 CP101611.1 Protein Homology CDS 1784431 1786584 . + 0 ID=cds-UTX06637.1;Parent=gene-NM058_09310;Dbxref=NCBI_GP:UTX06637.1;Name=UTX06637.1;gbkey=CDS;gene=pbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390379.1;locus_tag=NM058_09310;product=penicillin-binding protein 2A;protein_id=UTX06637.1;transl_table=11 CP101611.1 Genbank gene 1786739 1787641 . + . ID=gene-NM058_09315;Name=NM058_09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09315 CP101611.1 Protein Homology CDS 1786739 1787641 . + 0 ID=cds-UTX06638.1;Parent=gene-NM058_09315;Dbxref=NCBI_GP:UTX06638.1;Name=UTX06638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390378.1;locus_tag=NM058_09315;product=phosphate ABC transporter substrate-binding protein;protein_id=UTX06638.1;transl_table=11 CP101611.1 Genbank gene 1787710 1788639 . + . ID=gene-NM058_09320;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=NM058_09320 CP101611.1 Protein Homology CDS 1787710 1788639 . + 0 ID=cds-UTX06639.1;Parent=gene-NM058_09320;Dbxref=NCBI_GP:UTX06639.1;Name=UTX06639.1;Ontology_term=GO:0015415,GO:0005887,GO:0055052;gbkey=CDS;gene=pstC;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390377.2;locus_tag=NM058_09320;product=phosphate ABC transporter permease subunit PstC;protein_id=UTX06639.1;transl_table=11 CP101611.1 Genbank gene 1788639 1789523 . + . ID=gene-NM058_09325;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=NM058_09325 CP101611.1 Protein Homology CDS 1788639 1789523 . + 0 ID=cds-UTX06640.1;Parent=gene-NM058_09325;Dbxref=NCBI_GP:UTX06640.1;Name=UTX06640.1;Ontology_term=GO:0015415,GO:0005887,GO:0055052;gbkey=CDS;gene=pstA;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390376.2;locus_tag=NM058_09325;product=phosphate ABC transporter permease PstA;protein_id=UTX06640.1;transl_table=11 CP101611.1 Genbank gene 1789544 1790353 . + . ID=gene-NM058_09330;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=NM058_09330 CP101611.1 Protein Homology CDS 1789544 1790353 . + 0 ID=cds-UTX06641.1;Parent=gene-NM058_09330;Dbxref=NCBI_GP:UTX06641.1;Name=UTX06641.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390375.1;locus_tag=NM058_09330;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=UTX06641.1;transl_table=11 CP101611.1 Genbank pseudogene 1790364 1791144 . + . ID=gene-NM058_09335;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=pseudogene;locus_tag=NM058_09335;pseudo=true CP101611.1 Protein Homology CDS 1790364 1791144 . + 0 ID=cds-NM058_09335;Parent=gene-NM058_09335;Note=frameshifted;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390374.1;locus_tag=NM058_09335;product=phosphate ABC transporter ATP-binding protein PstB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1791176 1791640 . - . ID=gene-NM058_09340;Name=NM058_09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09340 CP101611.1 Protein Homology CDS 1791176 1791640 . - 0 ID=cds-UTX06642.1;Parent=gene-NM058_09340;Dbxref=NCBI_GP:UTX06642.1;Name=UTX06642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390373.2;locus_tag=NM058_09340;product=endolytic transglycosylase MltG;protein_id=UTX06642.1;transl_table=11 CP101611.1 Genbank gene 1791637 1791990 . - . ID=gene-NM058_09345;Name=NM058_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09345 CP101611.1 Protein Homology CDS 1791637 1791990 . - 0 ID=cds-UTX06643.1;Parent=gene-NM058_09345;Dbxref=NCBI_GP:UTX06643.1;Name=UTX06643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390372.1;locus_tag=NM058_09345;product=hypothetical protein;protein_id=UTX06643.1;transl_table=11 CP101611.1 Genbank pseudogene 1792170 1792639 . + . ID=gene-NM058_09350;Name=NM058_09350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09350;pseudo=true CP101611.1 Protein Homology CDS 1792170 1792639 . + 0 ID=cds-NM058_09350;Parent=gene-NM058_09350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390371.1;locus_tag=NM058_09350;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1792636 1793714 . + . ID=gene-NM058_09355;Name=NM058_09355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09355;pseudo=true CP101611.1 Protein Homology CDS 1792636 1793714 . + 0 ID=cds-NM058_09355;Parent=gene-NM058_09355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390370.2;locus_tag=NM058_09355;product=glycosyltransferase family 4 protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1793798 1793947 . + . ID=gene-NM058_09360;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=NM058_09360 CP101611.1 Protein Homology CDS 1793798 1793947 . + 0 ID=cds-UTX06644.1;Parent=gene-NM058_09360;Dbxref=NCBI_GP:UTX06644.1;Name=UTX06644.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=NM058_09360;product=50S ribosomal protein L33;protein_id=UTX06644.1;transl_table=11 CP101611.1 Genbank gene 1794032 1794595 . + . ID=gene-NM058_09365;Name=NM058_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09365 CP101611.1 Protein Homology CDS 1794032 1794595 . + 0 ID=cds-UTX06645.1;Parent=gene-NM058_09365;Dbxref=NCBI_GP:UTX06645.1;Name=UTX06645.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390369.1;locus_tag=NM058_09365;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=UTX06645.1;transl_table=11 CP101611.1 Genbank gene 1794660 1794833 . + . ID=gene-NM058_09370;Name=NM058_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09370 CP101611.1 Protein Homology CDS 1794660 1794833 . + 0 ID=cds-UTX06646.1;Parent=gene-NM058_09370;Dbxref=NCBI_GP:UTX06646.1;Name=UTX06646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390368.1;locus_tag=NM058_09370;product=hypothetical protein;protein_id=UTX06646.1;transl_table=11 CP101611.1 Genbank pseudogene 1794922 1796444 . + . ID=gene-NM058_09375;Name=yqgP;gbkey=Gene;gene=yqgP;gene_biotype=pseudogene;locus_tag=NM058_09375;pseudo=true CP101611.1 Protein Homology CDS 1794922 1796444 . + 0 ID=cds-NM058_09375;Parent=gene-NM058_09375;Note=frameshifted;gbkey=CDS;gene=yqgP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390367.2;locus_tag=NM058_09375;product=rhomboid protease YqgP;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1796558 1796774 . + . ID=gene-NM058_09380;Name=NM058_09380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09380;pseudo=true CP101611.1 Protein Homology CDS 1796558 1796774 . + 0 ID=cds-NM058_09380;Parent=gene-NM058_09380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390366.1;locus_tag=NM058_09380;product=YqgQ family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1796785 1797750 . + . ID=gene-NM058_09385;Name=glcK;gbkey=Gene;gene=glcK;gene_biotype=protein_coding;locus_tag=NM058_09385 CP101611.1 Protein Homology CDS 1796785 1797750 . + 0 ID=cds-UTX06647.1;Parent=gene-NM058_09385;Dbxref=NCBI_GP:UTX06647.1;Name=UTX06647.1;gbkey=CDS;gene=glcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390365.2;locus_tag=NM058_09385;product=glucose kinase GlcK;protein_id=UTX06647.1;transl_table=11 CP101611.1 Genbank pseudogene 1797866 1799780 . + . ID=gene-NM058_09390;Name=NM058_09390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09390;pseudo=true CP101611.1 Protein Homology CDS 1797866 1799780 . + 0 ID=cds-NM058_09390;Parent=gene-NM058_09390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390364.2;locus_tag=NM058_09390;product=LTA synthase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1799861 1800991 . + . ID=gene-NM058_09395;Name=NM058_09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09395 CP101611.1 Protein Homology CDS 1799861 1800991 . + 0 ID=cds-UTX07008.1;Parent=gene-NM058_09395;Dbxref=NCBI_GP:UTX07008.1;Name=UTX07008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390363.1;locus_tag=NM058_09395;product=M14 family metallocarboxypeptidase;protein_id=UTX07008.1;transl_table=11 CP101611.1 Genbank pseudogene 1801059 1802112 . + . ID=gene-NM058_09400;Name=NM058_09400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09400;pseudo=true CP101611.1 Protein Homology CDS 1801059 1802112 . + 0 ID=cds-NM058_09400;Parent=gene-NM058_09400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003226292.1;locus_tag=NM058_09400;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1802115 1802423 . + . ID=gene-NM058_09405;Name=NM058_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09405 CP101611.1 Protein Homology CDS 1802115 1802423 . + 0 ID=cds-UTX06648.1;Parent=gene-NM058_09405;Dbxref=NCBI_GP:UTX06648.1;Name=UTX06648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236982.1;locus_tag=NM058_09405;product=MTH1187 family thiamine-binding protein;protein_id=UTX06648.1;transl_table=11 CP101611.1 Genbank gene 1802461 1802634 . - . ID=gene-NM058_09410;Name=NM058_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09410 CP101611.1 Protein Homology CDS 1802461 1802634 . - 0 ID=cds-UTX06649.1;Parent=gene-NM058_09410;Dbxref=NCBI_GP:UTX06649.1;Name=UTX06649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390360.1;locus_tag=NM058_09410;product=DUF2759 domain-containing protein;protein_id=UTX06649.1;transl_table=11 CP101611.1 Genbank gene 1802791 1803423 . + . ID=gene-NM058_09415;Name=NM058_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09415 CP101611.1 Protein Homology CDS 1802791 1803423 . + 0 ID=cds-UTX06650.1;Parent=gene-NM058_09415;Dbxref=NCBI_GP:UTX06650.1;Name=UTX06650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390359.1;locus_tag=NM058_09415;product=MBL fold metallo-hydrolase;protein_id=UTX06650.1;transl_table=11 CP101611.1 Genbank gene 1803461 1803706 . - . ID=gene-NM058_09420;Name=NM058_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09420 CP101611.1 Protein Homology CDS 1803461 1803706 . - 0 ID=cds-UTX06651.1;Parent=gene-NM058_09420;Dbxref=NCBI_GP:UTX06651.1;Name=UTX06651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390358.1;locus_tag=NM058_09420;product=DUF2626 domain-containing protein;protein_id=UTX06651.1;transl_table=11 CP101611.1 Genbank gene 1803939 1804316 . + . ID=gene-NM058_09425;Name=mgsR;gbkey=Gene;gene=mgsR;gene_biotype=protein_coding;locus_tag=NM058_09425 CP101611.1 Protein Homology CDS 1803939 1804316 . + 0 ID=cds-UTX06652.1;Parent=gene-NM058_09425;Dbxref=NCBI_GP:UTX06652.1;Name=UTX06652.1;gbkey=CDS;gene=mgsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010334933.1;locus_tag=NM058_09425;product=transcriptional regulator MgsR;protein_id=UTX06652.1;transl_table=11 CP101611.1 Genbank gene 1804382 1804452 . - . ID=gene-NM058_09430;Name=NM058_09430;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_09430 CP101611.1 tRNAscan-SE tRNA 1804382 1804452 . - . ID=rna-NM058_09430;Parent=gene-NM058_09430;anticodon=(pos:complement(1804418..1804420));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_09430;product=tRNA-Gln CP101611.1 tRNAscan-SE exon 1804382 1804452 . - . ID=exon-NM058_09430-1;Parent=rna-NM058_09430;anticodon=(pos:complement(1804418..1804420));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_09430;product=tRNA-Gln CP101611.1 Genbank gene 1804541 1805380 . + . ID=gene-NM058_09435;Name=NM058_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09435 CP101611.1 Protein Homology CDS 1804541 1805380 . + 0 ID=cds-UTX06653.1;Parent=gene-NM058_09435;Dbxref=NCBI_GP:UTX06653.1;Name=UTX06653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236972.1;locus_tag=NM058_09435;product=STAS domain-containing protein;protein_id=UTX06653.1;transl_table=11 CP101611.1 Genbank pseudogene 1805440 1806767 . - . ID=gene-NM058_09440;Name=NM058_09440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09440;pseudo=true CP101611.1 Protein Homology CDS 1805440 1806767 . - 0 ID=cds-NM058_09440;Parent=gene-NM058_09440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390355.1;locus_tag=NM058_09440;product=hemolysin family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1806911 1807855 . + . ID=gene-NM058_09445;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;gene_synonym=yqhC,yqxL;locus_tag=NM058_09445 CP101611.1 Protein Homology CDS 1806911 1807855 . + 0 ID=cds-UTX06654.1;Parent=gene-NM058_09445;Dbxref=NCBI_GP:UTX06654.1;Name=UTX06654.1;gbkey=CDS;gene=corA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390354.1;locus_tag=NM058_09445;product=magnesium transporter CorA;protein_id=UTX06654.1;transl_table=11 CP101611.1 Genbank gene 1807918 1808328 . + . ID=gene-NM058_09450;Name=NM058_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09450 CP101611.1 Protein Homology CDS 1807918 1808328 . + 0 ID=cds-UTX06655.1;Parent=gene-NM058_09450;Dbxref=NCBI_GP:UTX06655.1;Name=UTX06655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258893.1;locus_tag=NM058_09450;product=CBS domain-containing protein;protein_id=UTX06655.1;transl_table=11 CP101611.1 Genbank gene 1808306 1808581 . + . ID=gene-NM058_09455;Name=NM058_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09455 CP101611.1 Protein Homology CDS 1808306 1808581 . + 0 ID=cds-UTX06656.1;Parent=gene-NM058_09455;Dbxref=NCBI_GP:UTX06656.1;Name=UTX06656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258892.1;locus_tag=NM058_09455;product=hypothetical protein;protein_id=UTX06656.1;transl_table=11 CP101611.1 Genbank gene 1808544 1809614 . + . ID=gene-NM058_09460;Name=comGA;gbkey=Gene;gene=comGA;gene_biotype=protein_coding;locus_tag=NM058_09460 CP101611.1 Protein Homology CDS 1808544 1809614 . + 0 ID=cds-UTX06657.1;Parent=gene-NM058_09460;Dbxref=NCBI_GP:UTX06657.1;Name=UTX06657.1;gbkey=CDS;gene=comGA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390353.1;locus_tag=NM058_09460;product=competence protein ComGA;protein_id=UTX06657.1;transl_table=11 CP101611.1 Genbank pseudogene 1809667 1810639 . + . ID=gene-NM058_09465;Name=NM058_09465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09465;pseudo=true CP101611.1 Protein Homology CDS 1809667 1810639 . + 0 ID=cds-NM058_09465;Parent=gene-NM058_09465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390352.1;locus_tag=NM058_09465;product=type II secretion system F family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1810653 1810949 . + . ID=gene-NM058_09470;Name=comGC;gbkey=Gene;gene=comGC;gene_biotype=protein_coding;locus_tag=NM058_09470 CP101611.1 Protein Homology CDS 1810653 1810949 . + 0 ID=cds-UTX06658.1;Parent=gene-NM058_09470;Dbxref=NCBI_GP:UTX06658.1;Name=UTX06658.1;gbkey=CDS;gene=comGC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390351.1;locus_tag=NM058_09470;product=comG operon protein ComGC;protein_id=UTX06658.1;transl_table=11 CP101611.1 Genbank gene 1810939 1811370 . + . ID=gene-NM058_09475;Name=NM058_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09475 CP101611.1 Protein Homology CDS 1810939 1811370 . + 0 ID=cds-UTX06659.1;Parent=gene-NM058_09475;Dbxref=NCBI_GP:UTX06659.1;Name=UTX06659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390350.1;locus_tag=NM058_09475;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=UTX06659.1;transl_table=11 CP101611.1 Genbank gene 1811354 1811698 . + . ID=gene-NM058_09480;Name=NM058_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09480 CP101611.1 Protein Homology CDS 1811354 1811698 . + 0 ID=cds-UTX06660.1;Parent=gene-NM058_09480;Dbxref=NCBI_GP:UTX06660.1;Name=UTX06660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390349.1;locus_tag=NM058_09480;product=competence protein ComG;protein_id=UTX06660.1;transl_table=11 CP101611.1 Genbank gene 1811724 1812107 . + . ID=gene-NM058_09485;Name=NM058_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09485 CP101611.1 Protein Homology CDS 1811724 1812107 . + 0 ID=cds-UTX06661.1;Parent=gene-NM058_09485;Dbxref=NCBI_GP:UTX06661.1;Name=UTX06661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390348.1;locus_tag=NM058_09485;product=competence protein ComG;protein_id=UTX06661.1;transl_table=11 CP101611.1 Genbank gene 1812108 1812482 . + . ID=gene-NM058_09490;Name=comGG;gbkey=Gene;gene=comGG;gene_biotype=protein_coding;locus_tag=NM058_09490 CP101611.1 Protein Homology CDS 1812108 1812482 . + 0 ID=cds-UTX06662.1;Parent=gene-NM058_09490;Dbxref=NCBI_GP:UTX06662.1;Name=UTX06662.1;gbkey=CDS;gene=comGG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390347.1;locus_tag=NM058_09490;product=ComGG family competence protein;protein_id=UTX06662.1;transl_table=11 CP101611.1 Genbank gene 1812553 1812732 . + . ID=gene-NM058_09495;Name=NM058_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09495 CP101611.1 Protein Homology CDS 1812553 1812732 . + 0 ID=cds-UTX06663.1;Parent=gene-NM058_09495;Dbxref=NCBI_GP:UTX06663.1;Name=UTX06663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390346.2;locus_tag=NM058_09495;product=YqzE family protein;protein_id=UTX06663.1;transl_table=11 CP101611.1 Genbank gene 1812774 1813097 . - . ID=gene-NM058_09500;Name=NM058_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09500 CP101611.1 Protein Homology CDS 1812774 1813097 . - 0 ID=cds-UTX06664.1;Parent=gene-NM058_09500;Dbxref=NCBI_GP:UTX06664.1;Name=UTX06664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390345.1;locus_tag=NM058_09500;product=YqzG/YhdC family protein;protein_id=UTX06664.1;transl_table=11 CP101611.1 Genbank gene 1813370 1814134 . + . ID=gene-NM058_09505;Name=tapA;gbkey=Gene;gene=tapA;gene_biotype=protein_coding;locus_tag=NM058_09505 CP101611.1 Protein Homology CDS 1813370 1814134 . + 0 ID=cds-UTX06665.1;Parent=gene-NM058_09505;Dbxref=NCBI_GP:UTX06665.1;Name=UTX06665.1;gbkey=CDS;gene=tapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390344.1;locus_tag=NM058_09505;product=amyloid fiber anchoring/assembly protein TapA;protein_id=UTX06665.1;transl_table=11 CP101611.1 Genbank gene 1814118 1814690 . + . ID=gene-NM058_09510;Name=NM058_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09510 CP101611.1 Protein Homology CDS 1814118 1814690 . + 0 ID=cds-UTX07009.1;Parent=gene-NM058_09510;Dbxref=NCBI_GP:UTX07009.1;Name=UTX07009.1;Ontology_term=GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390343.1;locus_tag=NM058_09510;product=signal peptidase I;protein_id=UTX07009.1;transl_table=11 CP101611.1 Genbank gene 1814754 1815539 . + . ID=gene-NM058_09515;Name=tasA;gbkey=Gene;gene=tasA;gene_biotype=protein_coding;locus_tag=NM058_09515 CP101611.1 Protein Homology CDS 1814754 1815539 . + 0 ID=cds-UTX06666.1;Parent=gene-NM058_09515;Dbxref=NCBI_GP:UTX06666.1;Name=UTX06666.1;gbkey=CDS;gene=tasA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390342.1;locus_tag=NM058_09515;product=biofilm matrix protein TasA;protein_id=UTX06666.1;transl_table=11 CP101611.1 Genbank gene 1815633 1815968 . - . ID=gene-NM058_09520;Name=sinR;gbkey=Gene;gene=sinR;gene_biotype=protein_coding;locus_tag=NM058_09520 CP101611.1 Protein Homology CDS 1815633 1815968 . - 0 ID=cds-UTX06667.1;Parent=gene-NM058_09520;Dbxref=NCBI_GP:UTX06667.1;Name=UTX06667.1;gbkey=CDS;gene=sinR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390341.1;locus_tag=NM058_09520;product=transcriptional regulator SinR;protein_id=UTX06667.1;transl_table=11 CP101611.1 Genbank gene 1816002 1816175 . - . ID=gene-NM058_09525;Name=NM058_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09525 CP101611.1 Protein Homology CDS 1816002 1816175 . - 0 ID=cds-UTX06668.1;Parent=gene-NM058_09525;Dbxref=NCBI_GP:UTX06668.1;Name=UTX06668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390340.1;locus_tag=NM058_09525;product=anti-repressor SinI family protein;protein_id=UTX06668.1;transl_table=11 CP101611.1 Genbank gene 1816360 1817154 . - . ID=gene-NM058_09530;Name=NM058_09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09530 CP101611.1 Protein Homology CDS 1816360 1817154 . - 0 ID=cds-UTX06669.1;Parent=gene-NM058_09530;Dbxref=NCBI_GP:UTX06669.1;Name=UTX06669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390339.1;locus_tag=NM058_09530;product=YqhG family protein;protein_id=UTX06669.1;transl_table=11 CP101611.1 Genbank gene 1817175 1818848 . - . ID=gene-NM058_09535;Name=NM058_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09535 CP101611.1 Protein Homology CDS 1817175 1818848 . - 0 ID=cds-UTX06670.1;Parent=gene-NM058_09535;Dbxref=NCBI_GP:UTX06670.1;Name=UTX06670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390338.1;locus_tag=NM058_09535;product=DEAD/DEAH box helicase;protein_id=UTX06670.1;transl_table=11 CP101611.1 cmsearch riboswitch 1819017 1819118 . + . ID=id-CP101611.1:1819017..1819118;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 1819292 1820380 . + . ID=gene-NM058_09540;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=NM058_09540 CP101611.1 Protein Homology CDS 1819292 1820380 . + 0 ID=cds-UTX06671.1;Parent=gene-NM058_09540;Dbxref=NCBI_GP:UTX06671.1;Name=UTX06671.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390337.2;locus_tag=NM058_09540;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=UTX06671.1;transl_table=11 CP101611.1 Genbank gene 1820410 1821756 . + . ID=gene-NM058_09545;Name=gcvPA;gbkey=Gene;gene=gcvPA;gene_biotype=protein_coding;locus_tag=NM058_09545 CP101611.1 Protein Homology CDS 1820410 1821756 . + 0 ID=cds-UTX06672.1;Parent=gene-NM058_09545;Dbxref=NCBI_GP:UTX06672.1;Name=UTX06672.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPA;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390336.2;locus_tag=NM058_09545;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;protein_id=UTX06672.1;transl_table=11 CP101611.1 Genbank pseudogene 1821749 1823214 . + . ID=gene-NM058_09550;Name=gcvPB;gbkey=Gene;gene=gcvPB;gene_biotype=pseudogene;locus_tag=NM058_09550;pseudo=true CP101611.1 Protein Homology CDS 1821749 1823214 . + 0 ID=cds-NM058_09550;Parent=gene-NM058_09550;Note=frameshifted;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPB;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390335.1;locus_tag=NM058_09550;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1823251 1823628 . - . ID=gene-NM058_09555;Name=NM058_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09555 CP101611.1 Protein Homology CDS 1823251 1823628 . - 0 ID=cds-UTX06673.1;Parent=gene-NM058_09555;Dbxref=NCBI_GP:UTX06673.1;Name=UTX06673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236926.1;locus_tag=NM058_09555;product=rhodanese-like domain-containing protein;protein_id=UTX06673.1;transl_table=11 CP101611.1 Genbank gene 1823819 1824655 . + . ID=gene-NM058_09560;Name=lipM;gbkey=Gene;gene=lipM;gene_biotype=protein_coding;locus_tag=NM058_09560 CP101611.1 Protein Homology CDS 1823819 1824655 . + 0 ID=cds-UTX06674.1;Parent=gene-NM058_09560;Dbxref=NCBI_GP:UTX06674.1;Name=UTX06674.1;gbkey=CDS;gene=lipM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390333.1;locus_tag=NM058_09560;product=octanoyltransferase LipM;protein_id=UTX06674.1;transl_table=11 CP101611.1 Genbank gene 1824755 1825183 . + . ID=gene-NM058_09565;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=NM058_09565 CP101611.1 Protein Homology CDS 1824755 1825183 . + 0 ID=cds-UTX06675.1;Parent=gene-NM058_09565;Dbxref=NCBI_GP:UTX06675.1;Name=UTX06675.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390332.2;locus_tag=NM058_09565;product=transcriptional regulator MntR;protein_id=UTX06675.1;transl_table=11 CP101611.1 Genbank gene 1825308 1826183 . + . ID=gene-NM058_09570;Name=NM058_09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09570 CP101611.1 Protein Homology CDS 1825308 1826183 . + 0 ID=cds-UTX06676.1;Parent=gene-NM058_09570;Dbxref=NCBI_GP:UTX06676.1;Name=UTX06676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390331.1;locus_tag=NM058_09570;product=patatin-like phospholipase family protein;protein_id=UTX06676.1;transl_table=11 CP101611.1 Genbank gene 1826180 1826575 . - . ID=gene-NM058_09575;Name=NM058_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09575 CP101611.1 Protein Homology CDS 1826180 1826575 . - 0 ID=cds-UTX06677.1;Parent=gene-NM058_09575;Dbxref=NCBI_GP:UTX06677.1;Name=UTX06677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390330.1;locus_tag=NM058_09575;product=hypothetical protein;protein_id=UTX06677.1;transl_table=11 CP101611.1 Genbank pseudogene 1826615 1827570 . - . ID=gene-NM058_09580;Name=NM058_09580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09580;pseudo=true CP101611.1 Protein Homology CDS 1826615 1827570 . - 0 ID=cds-NM058_09580;Parent=gene-NM058_09580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390329.2;locus_tag=NM058_09580;product=DUF1385 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1827797 1828333 . + . ID=gene-NM058_09585;Name=NM058_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09585 CP101611.1 Protein Homology CDS 1827797 1828333 . + 0 ID=cds-UTX06678.1;Parent=gene-NM058_09585;Dbxref=NCBI_GP:UTX06678.1;Name=UTX06678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390328.1;locus_tag=NM058_09585;product=YqhR family membrane protein;protein_id=UTX06678.1;transl_table=11 CP101611.1 Genbank gene 1828421 1828861 . + . ID=gene-NM058_09590;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=NM058_09590 CP101611.1 Protein Homology CDS 1828421 1828861 . + 0 ID=cds-UTX06679.1;Parent=gene-NM058_09590;Dbxref=NCBI_GP:UTX06679.1;Name=UTX06679.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258874.1;locus_tag=NM058_09590;product=type II 3-dehydroquinate dehydratase;protein_id=UTX06679.1;transl_table=11 CP101611.1 Genbank gene 1828864 1829925 . + . ID=gene-NM058_09595;Name=papA;gbkey=Gene;gene=papA;gene_biotype=protein_coding;locus_tag=NM058_09595 CP101611.1 Protein Homology CDS 1828864 1829925 . + 0 ID=cds-UTX06680.1;Parent=gene-NM058_09595;Dbxref=NCBI_GP:UTX06680.1;Name=UTX06680.1;gbkey=CDS;gene=papA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390326.1;locus_tag=NM058_09595;product=aminopeptidase PapA;protein_id=UTX06680.1;transl_table=11 CP101611.1 Genbank gene 1829950 1830507 . + . ID=gene-NM058_09600;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=NM058_09600 CP101611.1 Protein Homology CDS 1829950 1830507 . + 0 ID=cds-UTX06681.1;Parent=gene-NM058_09600;Dbxref=NCBI_GP:UTX06681.1;Name=UTX06681.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011231892.1;locus_tag=NM058_09600;product=elongation factor P;protein_id=UTX06681.1;transl_table=11 CP101611.1 Genbank gene 1830650 1830931 . + . ID=gene-NM058_09605;Name=NM058_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09605 CP101611.1 Protein Homology CDS 1830650 1830931 . + 0 ID=cds-UTX06682.1;Parent=gene-NM058_09605;Dbxref=NCBI_GP:UTX06682.1;Name=UTX06682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390324.1;locus_tag=NM058_09605;product=YqhV family protein;protein_id=UTX06682.1;transl_table=11 CP101611.1 Genbank gene 1831007 1831930 . + . ID=gene-NM058_09610;Name=spoIIIAA;gbkey=Gene;gene=spoIIIAA;gene_biotype=protein_coding;locus_tag=NM058_09610 CP101611.1 Protein Homology CDS 1831007 1831930 . + 0 ID=cds-UTX06683.1;Parent=gene-NM058_09610;Dbxref=NCBI_GP:UTX06683.1;Name=UTX06683.1;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=spoIIIAA;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390323.1;locus_tag=NM058_09610;product=stage III sporulation protein AA;protein_id=UTX06683.1;transl_table=11 CP101611.1 Genbank gene 1831924 1832439 . + . ID=gene-NM058_09615;Name=spoIIIAB;gbkey=Gene;gene=spoIIIAB;gene_biotype=protein_coding;locus_tag=NM058_09615 CP101611.1 Protein Homology CDS 1831924 1832439 . + 0 ID=cds-UTX06684.1;Parent=gene-NM058_09615;Dbxref=NCBI_GP:UTX06684.1;Name=UTX06684.1;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=spoIIIAB;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390322.1;locus_tag=NM058_09615;product=stage III sporulation protein SpoIIIAB;protein_id=UTX06684.1;transl_table=11 CP101611.1 Genbank gene 1832462 1832668 . + . ID=gene-NM058_09620;Name=spoIIIAC;gbkey=Gene;gene=spoIIIAC;gene_biotype=protein_coding;locus_tag=NM058_09620 CP101611.1 Protein Homology CDS 1832462 1832668 . + 0 ID=cds-UTX06685.1;Parent=gene-NM058_09620;Dbxref=NCBI_GP:UTX06685.1;Name=UTX06685.1;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=spoIIIAC;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390321.1;locus_tag=NM058_09620;product=stage III sporulation protein AC;protein_id=UTX06685.1;transl_table=11 CP101611.1 Genbank pseudogene 1832675 1833075 . + . ID=gene-NM058_09625;Name=spoIIIAD;gbkey=Gene;gene=spoIIIAD;gene_biotype=pseudogene;locus_tag=NM058_09625;pseudo=true CP101611.1 Protein Homology CDS 1832675 1833075 . + 0 ID=cds-NM058_09625;Parent=gene-NM058_09625;Note=frameshifted;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=spoIIIAD;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390320.1;locus_tag=NM058_09625;product=stage III sporulation protein AD;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1833094 1834292 . + . ID=gene-NM058_09630;Name=spoIIIAE;gbkey=Gene;gene=spoIIIAE;gene_biotype=pseudogene;locus_tag=NM058_09630;pseudo=true CP101611.1 Protein Homology CDS 1833094 1834292 . + 0 ID=cds-NM058_09630;Parent=gene-NM058_09630;Note=frameshifted;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=spoIIIAE;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390319.2;locus_tag=NM058_09630;product=stage III sporulation protein AE;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1834306 1834923 . + . ID=gene-NM058_09635;Name=spoIIIAF;gbkey=Gene;gene=spoIIIAF;gene_biotype=protein_coding;locus_tag=NM058_09635 CP101611.1 Protein Homology CDS 1834306 1834923 . + 0 ID=cds-UTX06686.1;Parent=gene-NM058_09635;Dbxref=NCBI_GP:UTX06686.1;Name=UTX06686.1;Ontology_term=GO:0030436,GO:0003674,GO:0016021;gbkey=CDS;gene=spoIIIAF;go_component=integral component of membrane|0016021||IEA;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390318.1;locus_tag=NM058_09635;product=stage III sporulation protein AF;protein_id=UTX06686.1;transl_table=11 CP101611.1 Genbank gene 1834916 1835605 . + . ID=gene-NM058_09640;Name=spoIIIAG;gbkey=Gene;gene=spoIIIAG;gene_biotype=protein_coding;locus_tag=NM058_09640 CP101611.1 Protein Homology CDS 1834916 1835605 . + 0 ID=cds-UTX06687.1;Parent=gene-NM058_09640;Dbxref=NCBI_GP:UTX06687.1;Name=UTX06687.1;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=spoIIIAG;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390317.2;locus_tag=NM058_09640;product=stage III sporulation protein AG;protein_id=UTX06687.1;transl_table=11 CP101611.1 Genbank gene 1835606 1836268 . + . ID=gene-NM058_09645;Name=spoIIIAH;gbkey=Gene;gene=spoIIIAH;gene_biotype=protein_coding;locus_tag=NM058_09645 CP101611.1 Protein Homology CDS 1835606 1836268 . + 0 ID=cds-UTX06688.1;Parent=gene-NM058_09645;Dbxref=NCBI_GP:UTX06688.1;Name=UTX06688.1;gbkey=CDS;gene=spoIIIAH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390316.2;locus_tag=NM058_09645;product=stage III sporulation ratchet engulfment protein SpoIIIAH;protein_id=UTX06688.1;transl_table=11 CP101611.1 Genbank pseudogene 1836424 1836905 . + . ID=gene-NM058_09650;Name=accB;gbkey=Gene;gene=accB;gene_biotype=pseudogene;locus_tag=NM058_09650;pseudo=true CP101611.1 Protein Homology CDS 1836424 1836905 . + 0 ID=cds-NM058_09650;Parent=gene-NM058_09650;Note=frameshifted;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390315.1;locus_tag=NM058_09650;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1836917 1838269 . + . ID=gene-NM058_09655;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=NM058_09655 CP101611.1 Protein Homology CDS 1836917 1838269 . + 0 ID=cds-UTX06689.1;Parent=gene-NM058_09655;Dbxref=NCBI_GP:UTX06689.1;Name=UTX06689.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390314.2;locus_tag=NM058_09655;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=UTX06689.1;transl_table=11 CP101611.1 Genbank gene 1838290 1838697 . + . ID=gene-NM058_09660;Name=yqhY;gbkey=Gene;gene=yqhY;gene_biotype=protein_coding;locus_tag=NM058_09660 CP101611.1 Protein Homology CDS 1838290 1838697 . + 0 ID=cds-UTX06690.1;Parent=gene-NM058_09660;Dbxref=NCBI_GP:UTX06690.1;Name=UTX06690.1;gbkey=CDS;gene=yqhY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390313.2;locus_tag=NM058_09660;product=fatty acid biosynthesis protein YqhY;protein_id=UTX06690.1;transl_table=11 CP101611.1 Genbank gene 1838962 1839357 . + . ID=gene-NM058_09665;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=NM058_09665 CP101611.1 Protein Homology CDS 1838962 1839357 . + 0 ID=cds-UTX06691.1;Parent=gene-NM058_09665;Dbxref=NCBI_GP:UTX06691.1;Name=UTX06691.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390312.2;locus_tag=NM058_09665;product=transcription antitermination factor NusB;protein_id=UTX06691.1;transl_table=11 CP101611.1 Genbank gene 1839369 1840220 . + . ID=gene-NM058_09670;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=NM058_09670 CP101611.1 Protein Homology CDS 1839369 1840220 . + 0 ID=cds-UTX06692.1;Parent=gene-NM058_09670;Dbxref=NCBI_GP:UTX06692.1;Name=UTX06692.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390311.1;locus_tag=NM058_09670;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=UTX06692.1;transl_table=11 CP101611.1 Genbank pseudogene 1840358 1841703 . + . ID=gene-NM058_09675;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=pseudogene;locus_tag=NM058_09675;pseudo=true CP101611.1 Protein Homology CDS 1840358 1841703 . + 0 ID=cds-NM058_09675;Parent=gene-NM058_09675;Note=frameshifted;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390310.2;locus_tag=NM058_09675;product=exodeoxyribonuclease VII large subunit;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1841700 1841954 . + . ID=gene-NM058_09680;Name=NM058_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09680 CP101611.1 Protein Homology CDS 1841700 1841954 . + 0 ID=cds-UTX06693.1;Parent=gene-NM058_09680;Dbxref=NCBI_GP:UTX06693.1;Name=UTX06693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390309.2;locus_tag=NM058_09680;product=exodeoxyribonuclease VII small subunit;protein_id=UTX06693.1;transl_table=11 CP101611.1 Genbank gene 1841944 1842834 . + . ID=gene-NM058_09685;Name=NM058_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09685 CP101611.1 Protein Homology CDS 1841944 1842834 . + 0 ID=cds-UTX06694.1;Parent=gene-NM058_09685;Dbxref=NCBI_GP:UTX06694.1;Name=UTX06694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390308.2;locus_tag=NM058_09685;product=polyprenyl synthetase family protein;protein_id=UTX06694.1;transl_table=11 CP101611.1 Genbank pseudogene 1843015 1844914 . + . ID=gene-NM058_09690;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=pseudogene;locus_tag=NM058_09690;pseudo=true CP101611.1 Protein Homology CDS 1843015 1844914 . + 0 ID=cds-NM058_09690;Parent=gene-NM058_09690;Note=frameshifted;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390307.1;locus_tag=NM058_09690;product=1-deoxy-D-xylulose-5-phosphate synthase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1844911 1845755 . + . ID=gene-NM058_09695;Name=NM058_09695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09695;pseudo=true CP101611.1 Protein Homology CDS 1844911 1845755 . + 0 ID=cds-NM058_09695;Parent=gene-NM058_09695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390306.2;locus_tag=NM058_09695;product=TlyA family RNA methyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1845852 1846301 . + . ID=gene-NM058_09700;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;gene_synonym=ahrC;locus_tag=NM058_09700 CP101611.1 Protein Homology CDS 1845852 1846301 . + 0 ID=cds-UTX06695.1;Parent=gene-NM058_09700;Dbxref=NCBI_GP:UTX06695.1;Name=UTX06695.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390305.1;locus_tag=NM058_09700;product=arginine repressor ArgR;protein_id=UTX06695.1;transl_table=11 CP101611.1 Genbank gene 1846337 1848067 . + . ID=gene-NM058_09705;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=NM058_09705 CP101611.1 Protein Homology CDS 1846337 1848067 . + 0 ID=cds-UTX06696.1;Parent=gene-NM058_09705;Dbxref=NCBI_GP:UTX06696.1;Name=UTX06696.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0005737;gbkey=CDS;gene=recN;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390304.2;locus_tag=NM058_09705;product=DNA repair protein RecN;protein_id=UTX06696.1;transl_table=11 CP101611.1 Genbank gene 1848242 1849522 . + . ID=gene-NM058_09710;Name=spoIVB;gbkey=Gene;gene=spoIVB;gene_biotype=protein_coding;locus_tag=NM058_09710 CP101611.1 Protein Homology CDS 1848242 1849522 . + 0 ID=cds-UTX06697.1;Parent=gene-NM058_09710;Dbxref=NCBI_GP:UTX06697.1;Name=UTX06697.1;Ontology_term=GO:0030436,GO:0008236;gbkey=CDS;gene=spoIVB;go_function=serine-type peptidase activity|0008236||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390303.2;locus_tag=NM058_09710;product=SpoIVB peptidase;protein_id=UTX06697.1;transl_table=11 CP101611.1 Genbank gene 1849798 1850601 . + . ID=gene-NM058_09715;Name=spo0A;gbkey=Gene;gene=spo0A;gene_biotype=protein_coding;locus_tag=NM058_09715 CP101611.1 Protein Homology CDS 1849798 1850601 . + 0 ID=cds-UTX06698.1;Parent=gene-NM058_09715;Dbxref=NCBI_GP:UTX06698.1;Name=UTX06698.1;Ontology_term=GO:0000160,GO:0006355,GO:0030436,GO:0042173,GO:0000156;gbkey=CDS;gene=spo0A;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of transcription%2C DNA-templated|0006355||IEA,asexual sporulation|0030436||IEA,regulation of sporulation resulting in formation of a cellular spore|0042173||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390302.1;locus_tag=NM058_09715;product=sporulation transcription factor Spo0A;protein_id=UTX06698.1;transl_table=11 CP101611.1 Genbank gene 1850743 1850922 . + . ID=gene-NM058_09720;Name=NM058_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09720 CP101611.1 Protein Homology CDS 1850743 1850922 . + 0 ID=cds-UTX06699.1;Parent=gene-NM058_09720;Dbxref=NCBI_GP:UTX06699.1;Name=UTX06699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236884.1;locus_tag=NM058_09720;product=hypothetical protein;protein_id=UTX06699.1;transl_table=11 CP101611.1 Genbank gene 1851156 1852274 . - . ID=gene-NM058_09725;Name=NM058_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09725 CP101611.1 Protein Homology CDS 1851156 1852274 . - 0 ID=cds-UTX06700.1;Parent=gene-NM058_09725;Dbxref=NCBI_GP:UTX06700.1;Name=UTX06700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390301.1;locus_tag=NM058_09725;product=NADH-dependent flavin oxidoreductase;protein_id=UTX06700.1;transl_table=11 CP101611.1 Genbank pseudogene 1852347 1852482 . - . ID=gene-NM058_09730;Name=NM058_09730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09730;pseudo=true CP101611.1 Protein Homology CDS 1852347 1852482 . - 0 ID=cds-NM058_09730;Parent=gene-NM058_09730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236876.1;locus_tag=NM058_09730;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1852810 1853106 . + . ID=gene-NM058_09735;Name=NM058_09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09735 CP101611.1 Protein Homology CDS 1852810 1853106 . + 0 ID=cds-UTX06701.1;Parent=gene-NM058_09735;Dbxref=NCBI_GP:UTX06701.1;Name=UTX06701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236873.1;locus_tag=NM058_09735;product=hypothetical protein;protein_id=UTX06701.1;transl_table=11 CP101611.1 Genbank gene 1853126 1853746 . + . ID=gene-NM058_09740;Name=NM058_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09740 CP101611.1 Protein Homology CDS 1853126 1853746 . + 0 ID=cds-UTX06702.1;Parent=gene-NM058_09740;Dbxref=NCBI_GP:UTX06702.1;Name=UTX06702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390299.2;locus_tag=NM058_09740;product=N-acetylmuramoyl-L-alanine amidase;protein_id=UTX06702.1;transl_table=11 CP101611.1 Genbank gene 1853825 1854556 . + . ID=gene-NM058_09745;Name=NM058_09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09745 CP101611.1 Protein Homology CDS 1853825 1854556 . + 0 ID=cds-UTX06703.1;Parent=gene-NM058_09745;Dbxref=NCBI_GP:UTX06703.1;Name=UTX06703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390298.2;locus_tag=NM058_09745;product=glycerophosphodiester phosphodiesterase;protein_id=UTX06703.1;transl_table=11 CP101611.1 Genbank pseudogene 1854683 1855863 . + . ID=gene-NM058_09750;Name=NM058_09750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09750;pseudo=true CP101611.1 Protein Homology CDS 1854683 1855863 . + 0 ID=cds-NM058_09750;Parent=gene-NM058_09750;Note=frameshifted;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390297.1;locus_tag=NM058_09750;product=acetyl-CoA C-acetyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1855888 1856751 . + . ID=gene-NM058_09755;Name=NM058_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09755 CP101611.1 Protein Homology CDS 1855888 1856751 . + 0 ID=cds-UTX06704.1;Parent=gene-NM058_09755;Dbxref=NCBI_GP:UTX06704.1;Name=UTX06704.1;Ontology_term=GO:0006631;gbkey=CDS;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390296.2;locus_tag=NM058_09755;product=3-hydroxybutyryl-CoA dehydrogenase;protein_id=UTX06704.1;transl_table=11 CP101611.1 Genbank pseudogene 1856779 1857916 . + . ID=gene-NM058_09760;Name=NM058_09760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09760;pseudo=true CP101611.1 Protein Homology CDS 1856779 1857916 . + 0 ID=cds-NM058_09760;Parent=gene-NM058_09760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003226445.1;locus_tag=NM058_09760;product=acyl-CoA dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1857948 1859065 . + . ID=gene-NM058_09765;Name=mmgD;gbkey=Gene;gene=mmgD;gene_biotype=pseudogene;locus_tag=NM058_09765;pseudo=true CP101611.1 Protein Homology CDS 1857948 1859065 . + 0 ID=cds-NM058_09765;Parent=gene-NM058_09765;Note=frameshifted;gbkey=CDS;gene=mmgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390294.1;locus_tag=NM058_09765;product=citrate synthase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1859087 1860503 . + . ID=gene-NM058_09770;Name=NM058_09770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09770;pseudo=true CP101611.1 Protein Homology CDS 1859087 1860503 . + 0 ID=cds-NM058_09770;Parent=gene-NM058_09770;Note=frameshifted;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390293.2;locus_tag=NM058_09770;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1860520 1861425 . + . ID=gene-NM058_09775;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=NM058_09775 CP101611.1 Protein Homology CDS 1860520 1861425 . + 0 ID=cds-UTX06705.1;Parent=gene-NM058_09775;Dbxref=NCBI_GP:UTX06705.1;Name=UTX06705.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390292.1;locus_tag=NM058_09775;product=methylisocitrate lyase;protein_id=UTX06705.1;transl_table=11 CP101611.1 Genbank gene 1861468 1861704 . - . ID=gene-NM058_09780;Name=NM058_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09780 CP101611.1 Protein Homology CDS 1861468 1861704 . - 0 ID=cds-UTX06706.1;Parent=gene-NM058_09780;Dbxref=NCBI_GP:UTX06706.1;Name=UTX06706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390291.1;locus_tag=NM058_09780;product=DUF2627 domain-containing protein;protein_id=UTX06706.1;transl_table=11 CP101611.1 Genbank gene 1861857 1863935 . + . ID=gene-NM058_09785;Name=NM058_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09785 CP101611.1 Protein Homology CDS 1861857 1863935 . + 0 ID=cds-UTX06707.1;Parent=gene-NM058_09785;Dbxref=NCBI_GP:UTX06707.1;Name=UTX06707.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390290.1;locus_tag=NM058_09785;product=sigma 54-interacting transcriptional regulator;protein_id=UTX06707.1;transl_table=11 CP101611.1 Genbank pseudogene 1864060 1864958 . + . ID=gene-NM058_09790;Name=yqiS;gbkey=Gene;gene=yqiS;gene_biotype=pseudogene;locus_tag=NM058_09790;pseudo=true CP101611.1 Protein Homology CDS 1864060 1864958 . + 0 ID=cds-NM058_09790;Parent=gene-NM058_09790;Note=frameshifted;Ontology_term=GO:0019605,GO:0050182;gbkey=CDS;gene=yqiS;go_function=phosphate butyryltransferase activity|0050182||IEA;go_process=butyrate metabolic process|0019605||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390289.2;locus_tag=NM058_09790;product=phosphate butyryltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1864970 1866064 . + . ID=gene-NM058_09795;Name=bcd;gbkey=Gene;gene=bcd;gene_biotype=protein_coding;locus_tag=NM058_09795 CP101611.1 Protein Homology CDS 1864970 1866064 . + 0 ID=cds-UTX06708.1;Parent=gene-NM058_09795;Dbxref=NCBI_GP:UTX06708.1;Name=UTX06708.1;gbkey=CDS;gene=bcd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390288.1;locus_tag=NM058_09795;product=branched-chain amino acid dehydrogenase;protein_id=UTX06708.1;transl_table=11 CP101611.1 Genbank pseudogene 1866083 1867172 . + . ID=gene-NM058_09800;Name=buk;gbkey=Gene;gene=buk;gene_biotype=pseudogene;locus_tag=NM058_09800;pseudo=true CP101611.1 Protein Homology CDS 1866083 1867172 . + 0 ID=cds-NM058_09800;Parent=gene-NM058_09800;Note=frameshifted;Ontology_term=GO:0006113,GO:0047761;gbkey=CDS;gene=buk;go_function=butyrate kinase activity|0047761||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390287.2;locus_tag=NM058_09800;product=butyrate kinase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1867193 1868614 . + . ID=gene-NM058_09805;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=NM058_09805 CP101611.1 Protein Homology CDS 1867193 1868614 . + 0 ID=cds-UTX06709.1;Parent=gene-NM058_09805;Dbxref=NCBI_GP:UTX06709.1;Name=UTX06709.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: protein motif:HMM:TIGR01350.1;locus_tag=NM058_09805;product=dihydrolipoyl dehydrogenase;protein_id=UTX06709.1;transl_table=11 CP101611.1 Genbank gene 1868636 1869628 . + . ID=gene-NM058_09810;Name=bfmBAA;gbkey=Gene;gene=bfmBAA;gene_biotype=protein_coding;locus_tag=NM058_09810 CP101611.1 Protein Homology CDS 1868636 1869628 . + 0 ID=cds-UTX06710.1;Parent=gene-NM058_09810;Dbxref=NCBI_GP:UTX06710.1;Name=UTX06710.1;gbkey=CDS;gene=bfmBAA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390285.1;locus_tag=NM058_09810;product=3-methyl-2-oxobutanoate dehydrogenase subunit alpha;protein_id=UTX06710.1;transl_table=11 CP101611.1 Genbank gene 1869642 1870625 . + . ID=gene-NM058_09815;Name=bfmBAB;gbkey=Gene;gene=bfmBAB;gene_biotype=protein_coding;locus_tag=NM058_09815 CP101611.1 Protein Homology CDS 1869642 1870625 . + 0 ID=cds-UTX06711.1;Parent=gene-NM058_09815;Dbxref=NCBI_GP:UTX06711.1;Name=UTX06711.1;gbkey=CDS;gene=bfmBAB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390284.1;locus_tag=NM058_09815;product=3-methyl-2-oxobutanoate dehydrogenase subunit beta;protein_id=UTX06711.1;transl_table=11 CP101611.1 Genbank gene 1870647 1871918 . + . ID=gene-NM058_09820;Name=bfmBB;gbkey=Gene;gene=bfmBB;gene_biotype=protein_coding;locus_tag=NM058_09820 CP101611.1 Protein Homology CDS 1870647 1871918 . + 0 ID=cds-UTX06712.1;Parent=gene-NM058_09820;Dbxref=NCBI_GP:UTX06712.1;Name=UTX06712.1;gbkey=CDS;gene=bfmBB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390283.1;locus_tag=NM058_09820;product=branched-chain alpha-keto dehydrogenase complex dihydrolipoyllysine-residue (2-methylpropanoyl)transferase;protein_id=UTX06712.1;transl_table=11 CP101611.1 Genbank gene 1871980 1872816 . - . ID=gene-NM058_09825;Name=bmrR;gbkey=Gene;gene=bmrR;gene_biotype=protein_coding;locus_tag=NM058_09825 CP101611.1 Protein Homology CDS 1871980 1872816 . - 0 ID=cds-UTX06713.1;Parent=gene-NM058_09825;Dbxref=NCBI_GP:UTX06713.1;Name=UTX06713.1;gbkey=CDS;gene=bmrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390282.2;locus_tag=NM058_09825;product=multidrug efflux transcriptional regulator BmrR;protein_id=UTX06713.1;transl_table=11 CP101611.1 Genbank pseudogene 1872889 1874059 . - . ID=gene-NM058_09830;Name=bmr;gbkey=Gene;gene=bmr;gene_biotype=pseudogene;locus_tag=NM058_09830;pseudo=true CP101611.1 Protein Homology CDS 1872889 1874059 . - 0 ID=cds-NM058_09830;Parent=gene-NM058_09830;Note=frameshifted;gbkey=CDS;gene=bmr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390281.2;locus_tag=NM058_09830;product=multidrug efflux MFS transporter Bmr;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1874166 1875059 . - . ID=gene-NM058_09835;Name=NM058_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09835 CP101611.1 Protein Homology CDS 1874166 1875059 . - 0 ID=cds-UTX06714.1;Parent=gene-NM058_09835;Dbxref=NCBI_GP:UTX06714.1;Name=UTX06714.1;Ontology_term=GO:0008150,GO:0001727,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=lipid kinase activity|0001727||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390280.2;locus_tag=NM058_09835;product=YegS/Rv2252/BmrU family lipid kinase;protein_id=UTX06714.1;transl_table=11 CP101611.1 Genbank gene 1875220 1875657 . + . ID=gene-NM058_09840;Name=brxB;gbkey=Gene;gene=brxB;gene_biotype=protein_coding;locus_tag=NM058_09840 CP101611.1 Protein Homology CDS 1875220 1875657 . + 0 ID=cds-UTX06715.1;Parent=gene-NM058_09840;Dbxref=NCBI_GP:UTX06715.1;Name=UTX06715.1;gbkey=CDS;gene=brxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390279.1;locus_tag=NM058_09840;product=bacilliredoxin BrxB;protein_id=UTX06715.1;transl_table=11 CP101611.1 Genbank gene 1875926 1876693 . + . ID=gene-NM058_09845;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=NM058_09845 CP101611.1 Protein Homology CDS 1875926 1876693 . + 0 ID=cds-UTX06716.1;Parent=gene-NM058_09845;Dbxref=NCBI_GP:UTX06716.1;Name=UTX06716.1;gbkey=CDS;gene=artP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390278.1;locus_tag=NM058_09845;product=arginine ABC transporter substrate-binding protein ArtP;protein_id=UTX06716.1;transl_table=11 CP101611.1 Genbank gene 1876773 1877432 . + . ID=gene-NM058_09850;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=NM058_09850 CP101611.1 Protein Homology CDS 1876773 1877432 . + 0 ID=cds-UTX06717.1;Parent=gene-NM058_09850;Dbxref=NCBI_GP:UTX06717.1;Name=UTX06717.1;gbkey=CDS;gene=artQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390277.1;locus_tag=NM058_09850;product=arginine ABC transporter permease ArtQ;protein_id=UTX06717.1;transl_table=11 CP101611.1 Genbank gene 1877425 1878147 . + . ID=gene-NM058_09855;Name=artR;gbkey=Gene;gene=artR;gene_biotype=protein_coding;locus_tag=NM058_09855 CP101611.1 Protein Homology CDS 1877425 1878147 . + 0 ID=cds-UTX06718.1;Parent=gene-NM058_09855;Dbxref=NCBI_GP:UTX06718.1;Name=UTX06718.1;gbkey=CDS;gene=artR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390276.1;locus_tag=NM058_09855;product=arginine ABC transporter ATP-binding protein ArtR;protein_id=UTX06718.1;transl_table=11 CP101611.1 Genbank gene 1878219 1879187 . + . ID=gene-NM058_09860;Name=NM058_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09860 CP101611.1 Protein Homology CDS 1878219 1879187 . + 0 ID=cds-UTX06719.1;Parent=gene-NM058_09860;Dbxref=NCBI_GP:UTX06719.1;Name=UTX06719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390275.2;locus_tag=NM058_09860;product=aromatic acid exporter family protein;protein_id=UTX06719.1;transl_table=11 CP101611.1 Genbank gene 1879239 1879772 . + . ID=gene-NM058_09865;Name=NM058_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09865 CP101611.1 Protein Homology CDS 1879239 1879772 . + 0 ID=cds-UTX06720.1;Parent=gene-NM058_09865;Dbxref=NCBI_GP:UTX06720.1;Name=UTX06720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390274.1;locus_tag=NM058_09865;product=L%2CD-transpeptidase;protein_id=UTX06720.1;transl_table=11 CP101611.1 Genbank gene 1879793 1879885 . - . ID=gene-NM058_09870;Name=prli42;gbkey=Gene;gene=prli42;gene_biotype=protein_coding;locus_tag=NM058_09870 CP101611.1 Protein Homology CDS 1879793 1879885 . - 0 ID=cds-UTX06721.1;Parent=gene-NM058_09870;Dbxref=NCBI_GP:UTX06721.1;Name=UTX06721.1;gbkey=CDS;gene=prli42;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003226489.1;locus_tag=NM058_09870;product=stressosome-associated protein Prli42;protein_id=UTX06721.1;transl_table=11 CP101611.1 Genbank gene 1879975 1880397 . + . ID=gene-NM058_09875;Name=mce;gbkey=Gene;gene=mce;gene_biotype=protein_coding;locus_tag=NM058_09875 CP101611.1 Protein Homology CDS 1879975 1880397 . + 0 ID=cds-UTX06722.1;Parent=gene-NM058_09875;Dbxref=NCBI_GP:UTX06722.1;Name=UTX06722.1;gbkey=CDS;gene=mce;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390273.2;locus_tag=NM058_09875;product=methylmalonyl-CoA epimerase;protein_id=UTX06722.1;transl_table=11 CP101611.1 Genbank gene 1880390 1881913 . + . ID=gene-NM058_09880;Name=NM058_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09880 CP101611.1 Protein Homology CDS 1880390 1881913 . + 0 ID=cds-UTX07010.1;Parent=gene-NM058_09880;Dbxref=NCBI_GP:UTX07010.1;Name=UTX07010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390272.2;locus_tag=NM058_09880;product=acyl-CoA carboxylase subunit beta;protein_id=UTX07010.1;transl_table=11 CP101611.1 Genbank pseudogene 1881931 1883044 . + . ID=gene-NM058_09885;Name=NM058_09885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09885;pseudo=true CP101611.1 Protein Homology CDS 1881931 1883044 . + 0 ID=cds-NM058_09885;Parent=gene-NM058_09885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390271.2;locus_tag=NM058_09885;product=tripeptidase T;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1883093 1883821 . - . ID=gene-NM058_09890;Name=NM058_09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09890 CP101611.1 Protein Homology CDS 1883093 1883821 . - 0 ID=cds-UTX06723.1;Parent=gene-NM058_09890;Dbxref=NCBI_GP:UTX06723.1;Name=UTX06723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014114315.1;locus_tag=NM058_09890;product=DUF2071 domain-containing protein;protein_id=UTX06723.1;transl_table=11 CP101611.1 Genbank gene 1883985 1884812 . - . ID=gene-NM058_09895;Name=NM058_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09895 CP101611.1 Protein Homology CDS 1883985 1884812 . - 0 ID=cds-UTX06724.1;Parent=gene-NM058_09895;Dbxref=NCBI_GP:UTX06724.1;Name=UTX06724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390269.1;locus_tag=NM058_09895;product=membrane protein insertase YidC;protein_id=UTX06724.1;transl_table=11 CP101611.1 Genbank gene 1884842 1885129 . - . ID=gene-NM058_09900;Name=mifM;gbkey=Gene;gene=mifM;gene_biotype=protein_coding;locus_tag=NM058_09900 CP101611.1 Protein Homology CDS 1884842 1885129 . - 0 ID=cds-UTX07011.1;Parent=gene-NM058_09900;Dbxref=NCBI_GP:UTX07011.1;Name=UTX07011.1;gbkey=CDS;gene=mifM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054586.1;locus_tag=NM058_09900;product=membrane protein insertion/folding monitor MifM;protein_id=UTX07011.1;transl_table=11 CP101611.1 Genbank gene 1885203 1885634 . + . ID=gene-NM058_09905;Name=NM058_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09905 CP101611.1 Protein Homology CDS 1885203 1885634 . + 0 ID=cds-UTX06725.1;Parent=gene-NM058_09905;Dbxref=NCBI_GP:UTX06725.1;Name=UTX06725.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013015.2;locus_tag=NM058_09905;product=hypothetical protein;protein_id=UTX06725.1;transl_table=11 CP101611.1 Genbank gene 1885637 1886443 . + . ID=gene-NM058_09910;Name=NM058_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09910 CP101611.1 Protein Homology CDS 1885637 1886443 . + 0 ID=cds-UTX07012.1;Parent=gene-NM058_09910;Dbxref=NCBI_GP:UTX07012.1;Name=UTX07012.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF002492.0;locus_tag=NM058_09910;product=hypothetical protein;protein_id=UTX07012.1;transl_table=11 CP101611.1 Genbank gene 1886553 1887962 . + . ID=gene-NM058_09915;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=NM058_09915 CP101611.1 Protein Homology CDS 1886553 1887962 . + 0 ID=cds-UTX06726.1;Parent=gene-NM058_09915;Dbxref=NCBI_GP:UTX06726.1;Name=UTX06726.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390267.2;locus_tag=NM058_09915;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=UTX06726.1;transl_table=11 CP101611.1 Genbank pseudogene 1888093 1889558 . - . ID=gene-NM058_09920;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=pseudogene;locus_tag=NM058_09920;pseudo=true CP101611.1 Protein Homology CDS 1888093 1889558 . - 0 ID=cds-NM058_09920;Parent=gene-NM058_09920;Note=frameshifted;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390266.2;locus_tag=NM058_09920;product=glucose-6-phosphate dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1889784 1890707 . + . ID=gene-NM058_09925;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=NM058_09925 CP101611.1 Protein Homology CDS 1889784 1890707 . + 0 ID=cds-UTX06727.1;Parent=gene-NM058_09925;Dbxref=NCBI_GP:UTX06727.1;Name=UTX06727.1;Ontology_term=GO:0042779,GO:0016891;gbkey=CDS;gene=rnz;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-trailer cleavage|0042779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390265.1;locus_tag=NM058_09925;product=ribonuclease Z;protein_id=UTX06727.1;transl_table=11 CP101611.1 Genbank gene 1890785 1890934 . + . ID=gene-NM058_09930;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=NM058_09930 CP101611.1 Protein Homology CDS 1890785 1890934 . + 0 ID=cds-UTX06728.1;Parent=gene-NM058_09930;Dbxref=NCBI_GP:UTX06728.1;Name=UTX06728.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=NM058_09930;product=50S ribosomal protein L33;protein_id=UTX06728.1;transl_table=11 CP101611.1 Genbank gene 1890976 1891737 . - . ID=gene-NM058_09935;Name=NM058_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09935 CP101611.1 Protein Homology CDS 1890976 1891737 . - 0 ID=cds-UTX06729.1;Parent=gene-NM058_09935;Dbxref=NCBI_GP:UTX06729.1;Name=UTX06729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390264.1;locus_tag=NM058_09935;product=alpha/beta hydrolase;protein_id=UTX06729.1;transl_table=11 CP101611.1 Genbank gene 1891848 1892864 . - . ID=gene-NM058_09940;Name=namA;gbkey=Gene;gene=namA;gene_biotype=protein_coding;locus_tag=NM058_09940 CP101611.1 Protein Homology CDS 1891848 1892864 . - 0 ID=cds-UTX06730.1;Parent=gene-NM058_09940;Dbxref=NCBI_GP:UTX06730.1;Name=UTX06730.1;Ontology_term=GO:0003959,GO:0010181,GO:0050661;gbkey=CDS;gene=namA;go_function=NADPH dehydrogenase activity|0003959||IEA,FMN binding|0010181||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390263.1;locus_tag=NM058_09940;product=NADPH dehydrogenase NamA;protein_id=UTX06730.1;transl_table=11 CP101611.1 Genbank pseudogene 1893037 1894670 . + . ID=gene-NM058_09945;Name=NM058_09945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09945;pseudo=true CP101611.1 Protein Homology CDS 1893037 1894670 . + 0 ID=cds-NM058_09945;Parent=gene-NM058_09945;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019714881.1;locus_tag=NM058_09945;product=M20/M25/M40 family metallo-hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1894719 1895555 . - . ID=gene-NM058_09950;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=NM058_09950 CP101611.1 Protein Homology CDS 1894719 1895555 . - 0 ID=cds-UTX06731.1;Parent=gene-NM058_09950;Dbxref=NCBI_GP:UTX06731.1;Name=UTX06731.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390261.1;locus_tag=NM058_09950;product=pyrroline-5-carboxylate reductase;protein_id=UTX06731.1;transl_table=11 CP101611.1 Genbank pseudogene 1895957 1896914 . + . ID=gene-NM058_09955;Name=NM058_09955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09955;pseudo=true CP101611.1 Protein Homology CDS 1895957 1896914 . + 0 ID=cds-NM058_09955;Parent=gene-NM058_09955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390260.1;locus_tag=NM058_09955;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1896920 1897699 . + . ID=gene-NM058_09960;Name=NM058_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09960 CP101611.1 Protein Homology CDS 1896920 1897699 . + 0 ID=cds-UTX06732.1;Parent=gene-NM058_09960;Dbxref=NCBI_GP:UTX06732.1;Name=UTX06732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390259.1;locus_tag=NM058_09960;product=SDR family oxidoreductase;protein_id=UTX06732.1;transl_table=11 CP101611.1 Genbank pseudogene 1897778 1899110 . + . ID=gene-NM058_09965;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=pseudogene;locus_tag=NM058_09965;pseudo=true CP101611.1 Protein Homology CDS 1897778 1899110 . + 0 ID=cds-NM058_09965;Parent=gene-NM058_09965;Note=frameshifted;Ontology_term=GO:0046416,GO:0008721,GO:0005737;gbkey=CDS;gene=dsdA;go_component=cytoplasm|0005737||IEA;go_function=D-serine ammonia-lyase activity|0008721||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236788.1;locus_tag=NM058_09965;product=D-serine ammonia-lyase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1899182 1900141 . + . ID=gene-NM058_09970;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=NM058_09970 CP101611.1 Protein Homology CDS 1899182 1900141 . + 0 ID=cds-UTX06733.1;Parent=gene-NM058_09970;Dbxref=NCBI_GP:UTX06733.1;Name=UTX06733.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390257.2;locus_tag=NM058_09970;product=type I pantothenate kinase;protein_id=UTX06733.1;transl_table=11 CP101611.1 Genbank pseudogene 1900146 1900241 . + . ID=gene-NM058_09975;Name=NM058_09975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09975;pseudo=true CP101611.1 Protein Homology CDS 1900146 1900241 . + 0 ID=cds-NM058_09975;Parent=gene-NM058_09975;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390256.1;locus_tag=NM058_09975;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1900282 1900440 . - . ID=gene-NM058_09980;Name=NM058_09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09980 CP101611.1 Protein Homology CDS 1900282 1900440 . - 0 ID=cds-UTX06734.1;Parent=gene-NM058_09980;Dbxref=NCBI_GP:UTX06734.1;Name=UTX06734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236781.1;locus_tag=NM058_09980;product=hypothetical protein;protein_id=UTX06734.1;transl_table=11 CP101611.1 Genbank pseudogene 1900492 1901722 . - . ID=gene-NM058_09985;Name=NM058_09985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_09985;pseudo=true CP101611.1 Protein Homology CDS 1900492 1901722 . - 0 ID=cds-NM058_09985;Parent=gene-NM058_09985;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390254.2;locus_tag=NM058_09985;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1901961 1902203 . + . ID=gene-NM058_09990;Name=NM058_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09990 CP101611.1 GeneMarkS-2+ CDS 1901961 1902203 . + 0 ID=cds-UTX06735.1;Parent=gene-NM058_09990;Dbxref=NCBI_GP:UTX06735.1;Name=UTX06735.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_09990;product=hypothetical protein;protein_id=UTX06735.1;transl_table=11 CP101611.1 Genbank gene 1902325 1902531 . - . ID=gene-NM058_09995;Name=NM058_09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_09995 CP101611.1 Protein Homology CDS 1902325 1902531 . - 0 ID=cds-UTX06736.1;Parent=gene-NM058_09995;Dbxref=NCBI_GP:UTX06736.1;Name=UTX06736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390253.1;locus_tag=NM058_09995;product=YqzH family protein;protein_id=UTX06736.1;transl_table=11 CP101611.1 Genbank pseudogene 1902699 1903936 . + . ID=gene-NM058_10000;Name=NM058_10000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10000;pseudo=true CP101611.1 Protein Homology CDS 1902699 1903936 . + 0 ID=cds-NM058_10000;Parent=gene-NM058_10000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390252.1;locus_tag=NM058_10000;product=DNA polymerase IV;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1903933 1904271 . + . ID=gene-NM058_10005;Name=NM058_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10005 CP101611.1 Protein Homology CDS 1903933 1904271 . + 0 ID=cds-UTX06737.1;Parent=gene-NM058_10005;Dbxref=NCBI_GP:UTX06737.1;Name=UTX06737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390251.1;locus_tag=NM058_10005;product=YolD-like family protein;protein_id=UTX06737.1;transl_table=11 CP101611.1 Genbank gene 1904461 1904931 . + . ID=gene-NM058_10010;Name=NM058_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10010 CP101611.1 Protein Homology CDS 1904461 1904931 . + 0 ID=cds-UTX06738.1;Parent=gene-NM058_10010;Dbxref=NCBI_GP:UTX06738.1;Name=UTX06738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390250.1;locus_tag=NM058_10010;product=GNAT family N-acetyltransferase;protein_id=UTX06738.1;transl_table=11 CP101611.1 Genbank gene 1904942 1905283 . + . ID=gene-NM058_10015;Name=NM058_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10015 CP101611.1 Protein Homology CDS 1904942 1905283 . + 0 ID=cds-UTX06739.1;Parent=gene-NM058_10015;Dbxref=NCBI_GP:UTX06739.1;Name=UTX06739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014114289.1;locus_tag=NM058_10015;product=antibiotic biosynthesis monooxygenase;protein_id=UTX06739.1;transl_table=11 CP101611.1 Genbank gene 1905280 1906311 . + . ID=gene-NM058_10020;Name=NM058_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10020 CP101611.1 Protein Homology CDS 1905280 1906311 . + 0 ID=cds-UTX06740.1;Parent=gene-NM058_10020;Dbxref=NCBI_GP:UTX06740.1;Name=UTX06740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390248.1;locus_tag=NM058_10020;product=bifunctional GNAT family N-acetyltransferase/GrpB family protein;protein_id=UTX06740.1;transl_table=11 CP101611.1 Genbank gene 1906308 1906631 . + . ID=gene-NM058_10025;Name=NM058_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10025 CP101611.1 Protein Homology CDS 1906308 1906631 . + 0 ID=cds-UTX06741.1;Parent=gene-NM058_10025;Dbxref=NCBI_GP:UTX06741.1;Name=UTX06741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390247.1;locus_tag=NM058_10025;product=hypothetical protein;protein_id=UTX06741.1;transl_table=11 CP101611.1 Genbank gene 1906645 1906884 . + . ID=gene-NM058_10030;Name=NM058_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10030 CP101611.1 Protein Homology CDS 1906645 1906884 . + 0 ID=cds-UTX06742.1;Parent=gene-NM058_10030;Dbxref=NCBI_GP:UTX06742.1;Name=UTX06742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390246.1;locus_tag=NM058_10030;product=YqkC family protein;protein_id=UTX06742.1;transl_table=11 CP101611.1 Genbank gene 1906925 1907842 . - . ID=gene-NM058_10035;Name=NM058_10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10035 CP101611.1 Protein Homology CDS 1906925 1907842 . - 0 ID=cds-UTX06743.1;Parent=gene-NM058_10035;Dbxref=NCBI_GP:UTX06743.1;Name=UTX06743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390245.1;locus_tag=NM058_10035;product=alpha/beta hydrolase;protein_id=UTX06743.1;transl_table=11 CP101611.1 Genbank pseudogene 1908006 1908229 . + . ID=gene-NM058_10040;Name=NM058_10040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10040;pseudo=true CP101611.1 Protein Homology CDS 1908006 1908229 . + 0 ID=cds-NM058_10040;Parent=gene-NM058_10040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390244.1;locus_tag=NM058_10040;product=YqkE family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1908262 1909182 . - . ID=gene-NM058_10045;Name=NM058_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10045 CP101611.1 Protein Homology CDS 1908262 1909182 . - 0 ID=cds-UTX06744.1;Parent=gene-NM058_10045;Dbxref=NCBI_GP:UTX06744.1;Name=UTX06744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390243.1;locus_tag=NM058_10045;product=aldo/keto reductase;protein_id=UTX06744.1;transl_table=11 CP101611.1 Genbank gene 1909245 1909367 . - . ID=gene-NM058_10050;Name=NM058_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10050 CP101611.1 Protein Homology CDS 1909245 1909367 . - 0 ID=cds-UTX06745.1;Parent=gene-NM058_10050;Dbxref=NCBI_GP:UTX06745.1;Name=UTX06745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513976.1;locus_tag=NM058_10050;product=Z-ring formation inhibitor MciZ;protein_id=UTX06745.1;transl_table=11 CP101611.1 Genbank gene 1909441 1909998 . + . ID=gene-NM058_10055;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=NM058_10055 CP101611.1 Protein Homology CDS 1909441 1909998 . + 0 ID=cds-UTX06746.1;Parent=gene-NM058_10055;Dbxref=NCBI_GP:UTX06746.1;Name=UTX06746.1;gbkey=CDS;gene=nudF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390242.1;locus_tag=NM058_10055;product=ADP-ribose pyrophosphatase;protein_id=UTX06746.1;transl_table=11 CP101611.1 Genbank gene 1909995 1911158 . + . ID=gene-NM058_10060;Name=NM058_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10060 CP101611.1 Protein Homology CDS 1909995 1911158 . + 0 ID=cds-UTX06747.1;Parent=gene-NM058_10060;Dbxref=NCBI_GP:UTX06747.1;Name=UTX06747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390241.2;locus_tag=NM058_10060;product=TIGR00375 family protein;protein_id=UTX06747.1;transl_table=11 CP101611.1 Genbank gene 1911167 1911517 . - . ID=gene-NM058_10065;Name=ansR;gbkey=Gene;gene=ansR;gene_biotype=protein_coding;locus_tag=NM058_10065 CP101611.1 Protein Homology CDS 1911167 1911517 . - 0 ID=cds-UTX06748.1;Parent=gene-NM058_10065;Dbxref=NCBI_GP:UTX06748.1;Name=UTX06748.1;gbkey=CDS;gene=ansR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390240.1;locus_tag=NM058_10065;product=HTH-type transcriptional regulator AnsR;protein_id=UTX06748.1;transl_table=11 CP101611.1 Genbank gene 1911699 1912688 . + . ID=gene-NM058_10070;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=NM058_10070 CP101611.1 Protein Homology CDS 1911699 1912688 . + 0 ID=cds-UTX06749.1;Parent=gene-NM058_10070;Dbxref=NCBI_GP:UTX06749.1;Name=UTX06749.1;gbkey=CDS;gene=ansA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390239.1;locus_tag=NM058_10070;product=asparaginase;protein_id=UTX06749.1;transl_table=11 CP101611.1 Genbank pseudogene 1912734 1914159 . + . ID=gene-NM058_10075;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=pseudogene;locus_tag=NM058_10075;pseudo=true CP101611.1 Protein Homology CDS 1912734 1914159 . + 0 ID=cds-NM058_10075;Parent=gene-NM058_10075;Note=frameshifted;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390238.2;locus_tag=NM058_10075;product=aspartate ammonia-lyase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1914301 1915707 . + . ID=gene-NM058_10080;Name=mleN;gbkey=Gene;gene=mleN;gene_biotype=protein_coding;locus_tag=NM058_10080 CP101611.1 Protein Homology CDS 1914301 1915707 . + 0 ID=cds-UTX06750.1;Parent=gene-NM058_10080;Dbxref=NCBI_GP:UTX06750.1;Name=UTX06750.1;gbkey=CDS;gene=mleN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390237.1;locus_tag=NM058_10080;product=malate-H+/Na+-lactate antiporter MleN;protein_id=UTX06750.1;transl_table=11 CP101611.1 Genbank gene 1915725 1917041 . + . ID=gene-NM058_10085;Name=NM058_10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10085 CP101611.1 Protein Homology CDS 1915725 1917041 . + 0 ID=cds-UTX06751.1;Parent=gene-NM058_10085;Dbxref=NCBI_GP:UTX06751.1;Name=UTX06751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390236.1;locus_tag=NM058_10085;product=NAD-dependent malic enzyme;protein_id=UTX06751.1;transl_table=11 CP101611.1 Genbank gene 1917141 1917356 . + . ID=gene-NM058_10090;Name=NM058_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10090 CP101611.1 Protein Homology CDS 1917141 1917356 . + 0 ID=cds-UTX06752.1;Parent=gene-NM058_10090;Dbxref=NCBI_GP:UTX06752.1;Name=UTX06752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390235.1;locus_tag=NM058_10090;product=hypothetical protein;protein_id=UTX06752.1;transl_table=11 CP101611.1 Genbank gene 1917457 1918101 . + . ID=gene-NM058_10095;Name=spoIIM;gbkey=Gene;gene=spoIIM;gene_biotype=protein_coding;locus_tag=NM058_10095 CP101611.1 Protein Homology CDS 1917457 1918101 . + 0 ID=cds-UTX06753.1;Parent=gene-NM058_10095;Dbxref=NCBI_GP:UTX06753.1;Name=UTX06753.1;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=spoIIM;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390234.1;locus_tag=NM058_10095;product=stage II sporulation protein M;protein_id=UTX06753.1;transl_table=11 CP101611.1 Genbank gene 1918214 1918663 . + . ID=gene-NM058_10100;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=NM058_10100 CP101611.1 Protein Homology CDS 1918214 1918663 . + 0 ID=cds-UTX06754.1;Parent=gene-NM058_10100;Dbxref=NCBI_GP:UTX06754.1;Name=UTX06754.1;gbkey=CDS;gene=fur;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390233.2;locus_tag=NM058_10100;product=ferric iron uptake transcriptional regulator;protein_id=UTX06754.1;transl_table=11 CP101611.1 Genbank gene 1918787 1919014 . + . ID=gene-NM058_10105;Name=NM058_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10105 CP101611.1 Protein Homology CDS 1918787 1919014 . + 0 ID=cds-UTX06755.1;Parent=gene-NM058_10105;Dbxref=NCBI_GP:UTX06755.1;Name=UTX06755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097760.1;locus_tag=NM058_10105;product=YqzK family protein;protein_id=UTX06755.1;transl_table=11 CP101611.1 Genbank gene 1919022 1919912 . + . ID=gene-NM058_10110;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=NM058_10110 CP101611.1 Protein Homology CDS 1919022 1919912 . + 0 ID=cds-UTX06756.1;Parent=gene-NM058_10110;Dbxref=NCBI_GP:UTX06756.1;Name=UTX06756.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390232.2;locus_tag=NM058_10110;product=site-specific tyrosine recombinase XerD;protein_id=UTX06756.1;transl_table=11 CP101611.1 Genbank gene 1920073 1921257 . + . ID=gene-NM058_10115;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=NM058_10115 CP101611.1 Protein Homology CDS 1920073 1921257 . + 0 ID=cds-UTX06757.1;Parent=gene-NM058_10115;Dbxref=NCBI_GP:UTX06757.1;Name=UTX06757.1;Ontology_term=GO:0006139,GO:0008973;gbkey=CDS;gene=deoB;go_function=phosphopentomutase activity|0008973||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390231.2;locus_tag=NM058_10115;product=phosphopentomutase;protein_id=UTX06757.1;transl_table=11 CP101611.1 Genbank gene 1921270 1922085 . + . ID=gene-NM058_10120;Name=NM058_10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10120 CP101611.1 Protein Homology CDS 1921270 1922085 . + 0 ID=cds-UTX06758.1;Parent=gene-NM058_10120;Dbxref=NCBI_GP:UTX06758.1;Name=UTX06758.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390230.1;locus_tag=NM058_10120;product=purine nucleoside phosphorylase I%2C inosine and guanosine-specific;protein_id=UTX06758.1;transl_table=11 CP101611.1 Genbank gene 1922240 1923409 . + . ID=gene-NM058_10125;Name=dacF;gbkey=Gene;gene=dacF;gene_biotype=protein_coding;locus_tag=NM058_10125 CP101611.1 Protein Homology CDS 1922240 1923409 . + 0 ID=cds-UTX06759.1;Parent=gene-NM058_10125;Dbxref=NCBI_GP:UTX06759.1;Name=UTX06759.1;gbkey=CDS;gene=dacF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390229.1;locus_tag=NM058_10125;product=D-alanyl-D-alanine carboxypeptidase DacF;protein_id=UTX06759.1;transl_table=11 CP101611.1 Genbank gene 1923505 1923858 . + . ID=gene-NM058_10130;Name=spoIIAA;gbkey=Gene;gene=spoIIAA;gene_biotype=protein_coding;locus_tag=NM058_10130 CP101611.1 Protein Homology CDS 1923505 1923858 . + 0 ID=cds-UTX06760.1;Parent=gene-NM058_10130;Dbxref=NCBI_GP:UTX06760.1;Name=UTX06760.1;Ontology_term=GO:0006355,GO:0030436,GO:0045152;gbkey=CDS;gene=spoIIAA;go_function=antisigma factor binding|0045152||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA,asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390228.1;locus_tag=NM058_10130;product=anti-sigma F factor antagonist;protein_id=UTX06760.1;transl_table=11 CP101611.1 Genbank gene 1923855 1924295 . + . ID=gene-NM058_10135;Name=spoIIAB;gbkey=Gene;gene=spoIIAB;gene_biotype=protein_coding;locus_tag=NM058_10135 CP101611.1 Protein Homology CDS 1923855 1924295 . + 0 ID=cds-UTX06761.1;Parent=gene-NM058_10135;Dbxref=NCBI_GP:UTX06761.1;Name=UTX06761.1;gbkey=CDS;gene=spoIIAB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390227.1;locus_tag=NM058_10135;product=anti-sigma F factor;protein_id=UTX06761.1;transl_table=11 CP101611.1 Genbank gene 1924307 1925074 . + . ID=gene-NM058_10140;Name=sigF;gbkey=Gene;gene=sigF;gene_biotype=protein_coding;locus_tag=NM058_10140 CP101611.1 Protein Homology CDS 1924307 1925074 . + 0 ID=cds-UTX06762.1;Parent=gene-NM058_10140;Dbxref=NCBI_GP:UTX06762.1;Name=UTX06762.1;Ontology_term=GO:0006352,GO:0030436,GO:0016987;gbkey=CDS;gene=sigF;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010334802.1;locus_tag=NM058_10140;product=RNA polymerase sporulation sigma factor SigF;protein_id=UTX06762.1;transl_table=11 CP101611.1 Genbank gene 1925201 1925821 . + . ID=gene-NM058_10145;Name=spoVAA;gbkey=Gene;gene=spoVAA;gene_biotype=protein_coding;locus_tag=NM058_10145 CP101611.1 Protein Homology CDS 1925201 1925821 . + 0 ID=cds-UTX06763.1;Parent=gene-NM058_10145;Dbxref=NCBI_GP:UTX06763.1;Name=UTX06763.1;gbkey=CDS;gene=spoVAA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390225.2;locus_tag=NM058_10145;product=stage V sporulation protein SpoVAA;protein_id=UTX06763.1;transl_table=11 CP101611.1 Genbank gene 1925811 1926236 . + . ID=gene-NM058_10150;Name=spoVAB;gbkey=Gene;gene=spoVAB;gene_biotype=protein_coding;locus_tag=NM058_10150 CP101611.1 Protein Homology CDS 1925811 1926236 . + 0 ID=cds-UTX06764.1;Parent=gene-NM058_10150;Dbxref=NCBI_GP:UTX06764.1;Name=UTX06764.1;gbkey=CDS;gene=spoVAB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390224.1;locus_tag=NM058_10150;product=stage V sporulation protein SpoVAB;protein_id=UTX06764.1;transl_table=11 CP101611.1 Genbank gene 1926249 1926698 . + . ID=gene-NM058_10155;Name=spoVAC;gbkey=Gene;gene=spoVAC;gene_biotype=protein_coding;locus_tag=NM058_10155 CP101611.1 Protein Homology CDS 1926249 1926698 . + 0 ID=cds-UTX06765.1;Parent=gene-NM058_10155;Dbxref=NCBI_GP:UTX06765.1;Name=UTX06765.1;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=spoVAC;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390223.1;locus_tag=NM058_10155;product=stage V sporulation protein AC;protein_id=UTX06765.1;transl_table=11 CP101611.1 Genbank gene 1926711 1927727 . + . ID=gene-NM058_10160;Name=spoVAD;gbkey=Gene;gene=spoVAD;gene_biotype=protein_coding;locus_tag=NM058_10160 CP101611.1 Protein Homology CDS 1926711 1927727 . + 0 ID=cds-UTX06766.1;Parent=gene-NM058_10160;Dbxref=NCBI_GP:UTX06766.1;Name=UTX06766.1;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=spoVAD;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390222.1;locus_tag=NM058_10160;product=stage V sporulation protein AD;protein_id=UTX06766.1;transl_table=11 CP101611.1 Genbank gene 1927729 1928079 . + . ID=gene-NM058_10165;Name=spoVAE;gbkey=Gene;gene=spoVAE;gene_biotype=protein_coding;locus_tag=NM058_10165 CP101611.1 Protein Homology CDS 1927729 1928079 . + 0 ID=cds-UTX06767.1;Parent=gene-NM058_10165;Dbxref=NCBI_GP:UTX06767.1;Name=UTX06767.1;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=spoVAE;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097759.1;locus_tag=NM058_10165;product=stage V sporulation protein AE;protein_id=UTX06767.1;transl_table=11 CP101611.1 Genbank pseudogene 1928087 1928703 . + . ID=gene-NM058_10170;Name=spoVAEA;gbkey=Gene;gene=spoVAEA;gene_biotype=pseudogene;locus_tag=NM058_10170;pseudo=true CP101611.1 Protein Homology CDS 1928087 1928703 . + 0 ID=cds-NM058_10170;Parent=gene-NM058_10170;Note=frameshifted;gbkey=CDS;gene=spoVAEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258804.1;locus_tag=NM058_10170;product=stage V sporulation protein SpoVABEA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1928648 1930129 . + . ID=gene-NM058_10175;Name=spoVAF;gbkey=Gene;gene=spoVAF;gene_biotype=protein_coding;locus_tag=NM058_10175 CP101611.1 Protein Homology CDS 1928648 1930129 . + 0 ID=cds-UTX06768.1;Parent=gene-NM058_10175;Dbxref=NCBI_GP:UTX06768.1;Name=UTX06768.1;gbkey=CDS;gene=spoVAF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390220.2;locus_tag=NM058_10175;product=spore germination protein SpoVAF;protein_id=UTX06768.1;transl_table=11 CP101611.1 Genbank pseudogene 1930230 1931554 . + . ID=gene-NM058_10180;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=pseudogene;locus_tag=NM058_10180;pseudo=true CP101611.1 Protein Homology CDS 1930230 1931554 . + 0 ID=cds-NM058_10180;Parent=gene-NM058_10180;Note=frameshifted;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: protein motif:HMM:NF014803.2;locus_tag=NM058_10180;product=diaminopimelate decarboxylase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1931582 1932454 . - . ID=gene-NM058_10185;Name=NM058_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10185 CP101611.1 Protein Homology CDS 1931582 1932454 . - 0 ID=cds-UTX06769.1;Parent=gene-NM058_10185;Dbxref=NCBI_GP:UTX06769.1;Name=UTX06769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390218.1;locus_tag=NM058_10185;product=DUF1002 domain-containing protein;protein_id=UTX06769.1;transl_table=11 CP101611.1 Genbank gene 1932711 1933142 . + . ID=gene-NM058_10190;Name=NM058_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10190 CP101611.1 Protein Homology CDS 1932711 1933142 . + 0 ID=cds-UTX06770.1;Parent=gene-NM058_10190;Dbxref=NCBI_GP:UTX06770.1;Name=UTX06770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390217.1;locus_tag=NM058_10190;product=peptidylprolyl isomerase;protein_id=UTX06770.1;transl_table=11 CP101611.1 Genbank gene 1933185 1933337 . + . ID=gene-NM058_10195;Name=NM058_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10195 CP101611.1 GeneMarkS-2+ CDS 1933185 1933337 . + 0 ID=cds-UTX07131.1;Parent=gene-NM058_10195;Dbxref=NCBI_GP:UTX07131.1;Name=UTX07131.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_10195;product=hypothetical protein;protein_id=UTX07131.1;transl_table=11 CP101611.1 Genbank pseudogene 1933294 1933505 . - . ID=gene-NM058_10200;Name=NM058_10200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10200;pseudo=true CP101611.1 Protein Homology CDS 1933294 1933505 . - 0 ID=cds-NM058_10200;Parent=gene-NM058_10200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236705.1;locus_tag=NM058_10200;product=spore germination protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1933804 1934010 . + . ID=gene-NM058_10205;Name=NM058_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10205 CP101611.1 Protein Homology CDS 1933804 1934010 . + 0 ID=cds-UTX06771.1;Parent=gene-NM058_10205;Dbxref=NCBI_GP:UTX06771.1;Name=UTX06771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097757.1;locus_tag=NM058_10205;product=zinc ribbon domain-containing protein;protein_id=UTX06771.1;transl_table=11 CP101611.1 Genbank gene 1934491 1935045 . + . ID=gene-NM058_10210;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=NM058_10210 CP101611.1 Protein Homology CDS 1934491 1935045 . + 0 ID=cds-UTX06772.1;Parent=gene-NM058_10210;Dbxref=NCBI_GP:UTX06772.1;Name=UTX06772.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390212.1;locus_tag=NM058_10210;product=signal peptidase I;protein_id=UTX06772.1;transl_table=11 CP101611.1 Genbank gene 1935296 1935640 . + . ID=gene-NM058_10215;Name=NM058_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10215 CP101611.1 Protein Homology CDS 1935296 1935640 . + 0 ID=cds-UTX06773.1;Parent=gene-NM058_10215;Dbxref=NCBI_GP:UTX06773.1;Name=UTX06773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390211.1;locus_tag=NM058_10215;product=hypothetical protein;protein_id=UTX06773.1;transl_table=11 CP101611.1 Genbank gene 1935702 1936852 . - . ID=gene-NM058_10220;Name=NM058_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10220 CP101611.1 Protein Homology CDS 1936579 1936852 . - 0 ID=cds-UTX06774.1;Parent=gene-NM058_10220;Dbxref=NCBI_GP:UTX06774.1;Name=UTX06774.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611387.1;locus_tag=NM058_10220;product=IS3 family transposase;protein_id=UTX06774.1;transl_table=11 CP101611.1 Protein Homology CDS 1935702 1936579 . - 2 ID=cds-UTX06774.1;Parent=gene-NM058_10220;Dbxref=NCBI_GP:UTX06774.1;Name=UTX06774.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611387.1;locus_tag=NM058_10220;product=IS3 family transposase;protein_id=UTX06774.1;transl_table=11 CP101611.1 cmsearch riboswitch 1937050 1937194 . + . ID=id-CP101611.1:1937050..1937194;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank pseudogene 1937325 1938408 . + . ID=gene-NM058_10225;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=pseudogene;locus_tag=NM058_10225;pseudo=true CP101611.1 Protein Homology CDS 1937325 1938408 . + 0 ID=cds-NM058_10225;Parent=gene-NM058_10225;Note=frameshifted;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390209.1;locus_tag=NM058_10225;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1938419 1939066 . + . ID=gene-NM058_10230;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=NM058_10230 CP101611.1 Protein Homology CDS 1938419 1939066 . + 0 ID=cds-UTX06775.1;Parent=gene-NM058_10230;Dbxref=NCBI_GP:UTX06775.1;Name=UTX06775.1;gbkey=CDS;gene=ribE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390208.1;locus_tag=NM058_10230;product=riboflavin synthase subunit alpha;protein_id=UTX06775.1;transl_table=11 CP101611.1 Genbank gene 1939081 1940274 . + . ID=gene-NM058_10235;Name=NM058_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10235 CP101611.1 Protein Homology CDS 1939081 1940274 . + 0 ID=cds-UTX06776.1;Parent=gene-NM058_10235;Dbxref=NCBI_GP:UTX06776.1;Name=UTX06776.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390207.1;locus_tag=NM058_10235;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=UTX06776.1;transl_table=11 CP101611.1 Genbank gene 1940307 1940771 . + . ID=gene-NM058_10240;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=NM058_10240 CP101611.1 Protein Homology CDS 1940307 1940771 . + 0 ID=cds-UTX06777.1;Parent=gene-NM058_10240;Dbxref=NCBI_GP:UTX06777.1;Name=UTX06777.1;gbkey=CDS;gene=ribH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390206.1;locus_tag=NM058_10240;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=UTX06777.1;transl_table=11 CP101611.1 Genbank gene 1940884 1941258 . + . ID=gene-NM058_10245;Name=ribT;gbkey=Gene;gene=ribT;gene_biotype=protein_coding;locus_tag=NM058_10245 CP101611.1 Protein Homology CDS 1940884 1941258 . + 0 ID=cds-UTX06778.1;Parent=gene-NM058_10245;Dbxref=NCBI_GP:UTX06778.1;Name=UTX06778.1;gbkey=CDS;gene=ribT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390205.1;locus_tag=NM058_10245;product=GNAT family N-acetyltransferase RibT;protein_id=UTX06778.1;transl_table=11 CP101611.1 Genbank pseudogene 1941255 1941793 . - . ID=gene-NM058_10250;Name=NM058_10250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10250;pseudo=true CP101611.1 Protein Homology CDS 1941255 1941793 . - 0 ID=cds-NM058_10250;Parent=gene-NM058_10250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003153375.1;locus_tag=NM058_10250;product=DUF309 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1942095 1942848 . + . ID=gene-NM058_10255;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=pseudogene;locus_tag=NM058_10255;pseudo=true CP101611.1 Protein Homology CDS 1942095 1942848 . + 0 ID=cds-NM058_10255;Parent=gene-NM058_10255;Note=frameshifted;gbkey=CDS;gene=scpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390203.1;locus_tag=NM058_10255;product=segregation/condensation protein A;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1942838 1943430 . + . ID=gene-NM058_10260;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=pseudogene;locus_tag=NM058_10260;pseudo=true CP101611.1 Protein Homology CDS 1942838 1943430 . + 0 ID=cds-NM058_10260;Parent=gene-NM058_10260;Note=frameshifted;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390202.1;locus_tag=NM058_10260;product=SMC-Scp complex subunit ScpB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1943485 1944024 . + . ID=gene-NM058_10265;Name=NM058_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10265 CP101611.1 Protein Homology CDS 1943485 1944024 . + 0 ID=cds-UTX06779.1;Parent=gene-NM058_10265;Dbxref=NCBI_GP:UTX06779.1;Name=UTX06779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390201.1;locus_tag=NM058_10265;product=YpuI family protein;protein_id=UTX06779.1;transl_table=11 CP101611.1 Genbank pseudogene 1944146 1945293 . + . ID=gene-NM058_10270;Name=NM058_10270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10270;pseudo=true CP101611.1 Protein Homology CDS 1944146 1945293 . + 0 ID=cds-NM058_10270;Parent=gene-NM058_10270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390200.1;locus_tag=NM058_10270;product=D-alanyl-D-alanine carboxypeptidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1945281 1945871 . + . ID=gene-NM058_10275;Name=spmA;gbkey=Gene;gene=spmA;gene_biotype=protein_coding;locus_tag=NM058_10275 CP101611.1 Protein Homology CDS 1945281 1945871 . + 0 ID=cds-UTX06780.1;Parent=gene-NM058_10275;Dbxref=NCBI_GP:UTX06780.1;Name=UTX06780.1;gbkey=CDS;gene=spmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390199.1;locus_tag=NM058_10275;product=spore maturation protein SpmA;protein_id=UTX06780.1;transl_table=11 CP101611.1 Genbank gene 1945876 1946412 . + . ID=gene-NM058_10280;Name=spmB;gbkey=Gene;gene=spmB;gene_biotype=protein_coding;locus_tag=NM058_10280 CP101611.1 Protein Homology CDS 1945876 1946412 . + 0 ID=cds-UTX06781.1;Parent=gene-NM058_10280;Dbxref=NCBI_GP:UTX06781.1;Name=UTX06781.1;gbkey=CDS;gene=spmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390198.2;locus_tag=NM058_10280;product=spore maturation protein SpmB;protein_id=UTX06781.1;transl_table=11 CP101611.1 Genbank pseudogene 1946503 1947236 . + . ID=gene-NM058_10285;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=pseudogene;locus_tag=NM058_10285;pseudo=true CP101611.1 Protein Homology CDS 1946503 1947236 . + 0 ID=cds-NM058_10285;Parent=gene-NM058_10285;Note=frameshifted;gbkey=CDS;gene=rluB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390197.2;locus_tag=NM058_10285;product=23S rRNA pseudouridine(2605) synthase RluB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1947331 1947870 . + . ID=gene-NM058_10290;Name=resA;gbkey=Gene;gene=resA;gene_biotype=protein_coding;locus_tag=NM058_10290 CP101611.1 Protein Homology CDS 1947331 1947870 . + 0 ID=cds-UTX06782.1;Parent=gene-NM058_10290;Dbxref=NCBI_GP:UTX06782.1;Name=UTX06782.1;gbkey=CDS;gene=resA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390196.2;locus_tag=NM058_10290;product=thiol-disulfide oxidoreductase ResA;protein_id=UTX06782.1;transl_table=11 CP101611.1 Genbank pseudogene 1947867 1949493 . + . ID=gene-NM058_10295;Name=resB;gbkey=Gene;gene=resB;gene_biotype=pseudogene;locus_tag=NM058_10295;pseudo=true CP101611.1 Protein Homology CDS 1947867 1949493 . + 0 ID=cds-NM058_10295;Parent=gene-NM058_10295;Note=frameshifted;gbkey=CDS;gene=resB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390195.1;locus_tag=NM058_10295;product=cytochrome c biogenesis protein ResB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1949513 1950688 . + . ID=gene-NM058_10300;Name=resC;gbkey=Gene;gene=resC;gene_biotype=protein_coding;locus_tag=NM058_10300 CP101611.1 Protein Homology CDS 1949513 1950688 . + 0 ID=cds-UTX06783.1;Parent=gene-NM058_10300;Dbxref=NCBI_GP:UTX06783.1;Name=UTX06783.1;gbkey=CDS;gene=resC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390194.2;locus_tag=NM058_10300;product=cytochrome c biogenesis protein ResC;protein_id=UTX06783.1;transl_table=11 CP101611.1 Genbank pseudogene 1950769 1951490 . + . ID=gene-NM058_10305;Name=resD;gbkey=Gene;gene=resD;gene_biotype=pseudogene;locus_tag=NM058_10305;pseudo=true CP101611.1 Protein Homology CDS 1950769 1951490 . + 0 ID=cds-NM058_10305;Parent=gene-NM058_10305;Note=frameshifted;gbkey=CDS;gene=resD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390193.2;locus_tag=NM058_10305;product=DNA-binding response regulator ResD;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1951487 1953254 . + . ID=gene-NM058_10310;Name=resE;gbkey=Gene;gene=resE;gene_biotype=pseudogene;locus_tag=NM058_10310;pseudo=true CP101611.1 Protein Homology CDS 1951487 1953254 . + 0 ID=cds-NM058_10310;Parent=gene-NM058_10310;Note=frameshifted;gbkey=CDS;gene=resE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013352717.1;locus_tag=NM058_10310;product=sensor histidine kinase ResE;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1953458 1954042 . + . ID=gene-NM058_10315;Name=sigX;gbkey=Gene;gene=sigX;gene_biotype=protein_coding;locus_tag=NM058_10315 CP101611.1 Protein Homology CDS 1953458 1954042 . + 0 ID=cds-UTX06784.1;Parent=gene-NM058_10315;Dbxref=NCBI_GP:UTX06784.1;Name=UTX06784.1;gbkey=CDS;gene=sigX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390191.2;locus_tag=NM058_10315;product=RNA polymerase sigma factor SigX;protein_id=UTX06784.1;transl_table=11 CP101611.1 Genbank gene 1953978 1955087 . + . ID=gene-NM058_10320;Name=NM058_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10320 CP101611.1 Protein Homology CDS 1953978 1955087 . + 0 ID=cds-UTX06785.1;Parent=gene-NM058_10320;Dbxref=NCBI_GP:UTX06785.1;Name=UTX06785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390190.2;locus_tag=NM058_10320;product=GerMN domain-containing protein;protein_id=UTX06785.1;transl_table=11 CP101611.1 Genbank gene 1955200 1955967 . + . ID=gene-NM058_10325;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=NM058_10325 CP101611.1 Protein Homology CDS 1955200 1955967 . + 0 ID=cds-UTX06786.1;Parent=gene-NM058_10325;Dbxref=NCBI_GP:UTX06786.1;Name=UTX06786.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004398182.1;locus_tag=NM058_10325;product=type I 3-dehydroquinate dehydratase;protein_id=UTX06786.1;transl_table=11 CP101611.1 Genbank gene 1956010 1957587 . - . ID=gene-NM058_10330;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=NM058_10330 CP101611.1 Protein Homology CDS 1956010 1957587 . - 0 ID=cds-UTX06787.1;Parent=gene-NM058_10330;Dbxref=NCBI_GP:UTX06787.1;Name=UTX06787.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390188.2;locus_tag=NM058_10330;product=phosphoglycerate dehydrogenase;protein_id=UTX06787.1;transl_table=11 CP101611.1 cmsearch riboswitch 1957794 1957928 . + . ID=id-CP101611.1:1957794..1957928;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 1958081 1958653 . + . ID=gene-NM058_10335;Name=fmnP;gbkey=Gene;gene=fmnP;gene_biotype=protein_coding;locus_tag=NM058_10335 CP101611.1 Protein Homology CDS 1958081 1958653 . + 0 ID=cds-UTX06788.1;Parent=gene-NM058_10335;Dbxref=NCBI_GP:UTX06788.1;Name=UTX06788.1;gbkey=CDS;gene=fmnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390186.1;locus_tag=NM058_10335;product=riboflavin transporter FmnP;protein_id=UTX06788.1;transl_table=11 CP101611.1 Genbank gene 1958692 1958940 . - . ID=gene-NM058_10340;Name=NM058_10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10340 CP101611.1 Protein Homology CDS 1958692 1958940 . - 0 ID=cds-UTX06789.1;Parent=gene-NM058_10340;Dbxref=NCBI_GP:UTX06789.1;Name=UTX06789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003225461.1;locus_tag=NM058_10340;product=ferredoxin;protein_id=UTX06789.1;transl_table=11 CP101611.1 Genbank gene 1959206 1960264 . + . ID=gene-NM058_10345;Name=NM058_10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10345 CP101611.1 Protein Homology CDS 1959206 1960264 . + 0 ID=cds-UTX06790.1;Parent=gene-NM058_10345;Dbxref=NCBI_GP:UTX06790.1;Name=UTX06790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390184.1;locus_tag=NM058_10345;product=helix-turn-helix domain-containing protein;protein_id=UTX06790.1;transl_table=11 CP101611.1 Genbank pseudogene 1960257 1961746 . + . ID=gene-NM058_10350;Name=NM058_10350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10350;pseudo=true CP101611.1 Protein Homology CDS 1960257 1961746 . + 0 ID=cds-NM058_10350;Parent=gene-NM058_10350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390183.1;locus_tag=NM058_10350;product=ATP-dependent DNA helicase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1961773 1962345 . + . ID=gene-NM058_10355;Name=NM058_10355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10355;pseudo=true CP101611.1 Protein Homology CDS 1961773 1962345 . + 0 ID=cds-NM058_10355;Parent=gene-NM058_10355;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013352710.1;locus_tag=NM058_10355;product=CPBP family intramembrane metalloprotease;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1962326 1963068 . + . ID=gene-NM058_10360;Name=NM058_10360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10360;pseudo=true CP101611.1 Protein Homology CDS 1962326 1963068 . + 0 ID=cds-NM058_10360;Parent=gene-NM058_10360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258773.1;locus_tag=NM058_10360;product=LysM peptidoglycan-binding domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1963132 1963575 . + . ID=gene-NM058_10365;Name=NM058_10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10365 CP101611.1 Protein Homology CDS 1963132 1963575 . + 0 ID=cds-UTX06791.1;Parent=gene-NM058_10365;Dbxref=NCBI_GP:UTX06791.1;Name=UTX06791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390180.1;locus_tag=NM058_10365;product=YpbF family protein;protein_id=UTX06791.1;transl_table=11 CP101611.1 Genbank gene 1963659 1964438 . + . ID=gene-NM058_10370;Name=NM058_10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10370 CP101611.1 Protein Homology CDS 1963659 1964438 . + 0 ID=cds-UTX06792.1;Parent=gene-NM058_10370;Dbxref=NCBI_GP:UTX06792.1;Name=UTX06792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390179.1;locus_tag=NM058_10370;product=metallophosphoesterase;protein_id=UTX06792.1;transl_table=11 CP101611.1 Genbank pseudogene 1964597 1965180 . + . ID=gene-NM058_10375;Name=NM058_10375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10375;pseudo=true CP101611.1 Protein Homology CDS 1964597 1965180 . + 0 ID=cds-NM058_10375;Parent=gene-NM058_10375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390178.1;locus_tag=NM058_10375;product=genetic competence negative regulator;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1965336 1966610 . + . ID=gene-NM058_10380;Name=gudB;gbkey=Gene;gene=gudB;gene_biotype=protein_coding;locus_tag=NM058_10380 CP101611.1 Protein Homology CDS 1965336 1966610 . + 0 ID=cds-UTX06793.1;Parent=gene-NM058_10380;Dbxref=NCBI_GP:UTX06793.1;Name=UTX06793.1;gbkey=CDS;gene=gudB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390177.2;locus_tag=NM058_10380;product=NAD-specific glutamate dehydrogenase;protein_id=UTX06793.1;transl_table=11 CP101611.1 Genbank gene 1966720 1967694 . + . ID=gene-NM058_10385;Name=NM058_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10385 CP101611.1 Protein Homology CDS 1966720 1967694 . + 0 ID=cds-UTX06794.1;Parent=gene-NM058_10385;Dbxref=NCBI_GP:UTX06794.1;Name=UTX06794.1;Ontology_term=GO:0006790,GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390176.2;locus_tag=NM058_10385;product=YpdA family putative bacillithiol disulfide reductase;protein_id=UTX06794.1;transl_table=11 CP101611.1 Genbank gene 1967814 1968470 . + . ID=gene-NM058_10390;Name=prsW;gbkey=Gene;gene=prsW;gene_biotype=protein_coding;locus_tag=NM058_10390 CP101611.1 Protein Homology CDS 1967814 1968470 . + 0 ID=cds-UTX06795.1;Parent=gene-NM058_10390;Dbxref=NCBI_GP:UTX06795.1;Name=UTX06795.1;Ontology_term=GO:0070007;gbkey=CDS;gene=prsW;go_function=glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390175.1;locus_tag=NM058_10390;product=glutamic-type intramembrane protease PrsW;protein_id=UTX06795.1;transl_table=11 CP101611.1 Genbank gene 1968624 1969535 . + . ID=gene-NM058_10395;Name=sleB;gbkey=Gene;gene=sleB;gene_biotype=protein_coding;locus_tag=NM058_10395 CP101611.1 Protein Homology CDS 1968624 1969535 . + 0 ID=cds-UTX06796.1;Parent=gene-NM058_10395;Dbxref=NCBI_GP:UTX06796.1;Name=UTX06796.1;Ontology_term=GO:0009847,GO:0003824;gbkey=CDS;gene=sleB;go_function=catalytic activity|0003824||IEA;go_process=spore germination|0009847||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390174.1;locus_tag=NM058_10395;product=spore cortex-lytic enzyme;protein_id=UTX06796.1;transl_table=11 CP101611.1 Genbank gene 1969571 1970923 . + . ID=gene-NM058_10400;Name=ypeB;gbkey=Gene;gene=ypeB;gene_biotype=protein_coding;locus_tag=NM058_10400 CP101611.1 Protein Homology CDS 1969571 1970923 . + 0 ID=cds-UTX06797.1;Parent=gene-NM058_10400;Dbxref=NCBI_GP:UTX06797.1;Name=UTX06797.1;Ontology_term=GO:0009847,GO:0030436,GO:0003674;gbkey=CDS;gene=ypeB;go_function=molecular_function|0003674||IEA;go_process=spore germination|0009847||IEA,asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390173.1;locus_tag=NM058_10400;product=germination protein YpeB;protein_id=UTX06797.1;transl_table=11 CP101611.1 Genbank gene 1971019 1971675 . + . ID=gene-NM058_10405;Name=NM058_10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10405 CP101611.1 Protein Homology CDS 1971019 1971675 . + 0 ID=cds-UTX07013.1;Parent=gene-NM058_10405;Dbxref=NCBI_GP:UTX07013.1;Name=UTX07013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390172.1;locus_tag=NM058_10405;product=flagellar brake domain-containing protein;protein_id=UTX07013.1;transl_table=11 CP101611.1 Genbank gene 1971720 1971896 . + . ID=gene-NM058_10410;Name=NM058_10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10410 CP101611.1 Protein Homology CDS 1971720 1971896 . + 0 ID=cds-UTX06798.1;Parent=gene-NM058_10410;Dbxref=NCBI_GP:UTX06798.1;Name=UTX06798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390171.1;locus_tag=NM058_10410;product=YpfB family protein;protein_id=UTX06798.1;transl_table=11 CP101611.1 Genbank pseudogene 1971975 1972644 . + . ID=gene-NM058_10415;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=pseudogene;locus_tag=NM058_10415;pseudo=true CP101611.1 Protein Homology CDS 1971975 1972644 . + 0 ID=cds-NM058_10415;Parent=gene-NM058_10415;Note=frameshifted;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390170.1;locus_tag=NM058_10415;product=(d)CMP kinase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1972878 1974025 . + . ID=gene-NM058_10420;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=pseudogene;locus_tag=NM058_10420;pseudo=true CP101611.1 Protein Homology CDS 1972878 1974025 . + 0 ID=cds-NM058_10420;Parent=gene-NM058_10420;Note=frameshifted;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390169.1;locus_tag=NM058_10420;product=30S ribosomal protein S1;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1974038 1975087 . + . ID=gene-NM058_10425;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=NM058_10425 CP101611.1 Protein Homology CDS 1974038 1975087 . + 0 ID=cds-UTX06799.1;Parent=gene-NM058_10425;Dbxref=NCBI_GP:UTX06799.1;Name=UTX06799.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390168.3;locus_tag=NM058_10425;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=UTX06799.1;transl_table=11 CP101611.1 Genbank gene 1975129 1975260 . - . ID=gene-NM058_10430;Name=NM058_10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10430 CP101611.1 Protein Homology CDS 1975129 1975260 . - 0 ID=cds-UTX06800.1;Parent=gene-NM058_10430;Dbxref=NCBI_GP:UTX06800.1;Name=UTX06800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097756.2;locus_tag=NM058_10430;product=YpzI family protein;protein_id=UTX06800.1;transl_table=11 CP101611.1 Genbank gene 1975338 1975937 . + . ID=gene-NM058_10435;Name=NM058_10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10435 CP101611.1 Protein Homology CDS 1975338 1975937 . + 0 ID=cds-UTX06801.1;Parent=gene-NM058_10435;Dbxref=NCBI_GP:UTX06801.1;Name=UTX06801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390167.1;locus_tag=NM058_10435;product=hypothetical protein;protein_id=UTX06801.1;transl_table=11 CP101611.1 Genbank gene 1975934 1976827 . + . ID=gene-NM058_10440;Name=NM058_10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10440 CP101611.1 Protein Homology CDS 1975934 1976827 . + 0 ID=cds-UTX06802.1;Parent=gene-NM058_10440;Dbxref=NCBI_GP:UTX06802.1;Name=UTX06802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390166.1;locus_tag=NM058_10440;product=YIEGIA family protein;protein_id=UTX06802.1;transl_table=11 CP101611.1 Genbank gene 1976824 1977018 . + . ID=gene-NM058_10445;Name=NM058_10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10445 CP101611.1 Protein Homology CDS 1976824 1977018 . + 0 ID=cds-UTX06803.1;Parent=gene-NM058_10445;Dbxref=NCBI_GP:UTX06803.1;Name=UTX06803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097755.1;locus_tag=NM058_10445;product=hypothetical protein;protein_id=UTX06803.1;transl_table=11 CP101611.1 Genbank gene 1977172 1978482 . + . ID=gene-NM058_10450;Name=engA;gbkey=Gene;gene=engA;gene_biotype=protein_coding;gene_synonym=der;locus_tag=NM058_10450 CP101611.1 Protein Homology CDS 1977172 1978482 . + 0 ID=cds-UTX06804.1;Parent=gene-NM058_10450;Dbxref=NCBI_GP:UTX06804.1;Name=UTX06804.1;gbkey=CDS;gene=engA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390165.1;locus_tag=NM058_10450;product=ribosome-associated GTPase EngA;protein_id=UTX06804.1;transl_table=11 CP101611.1 Genbank pseudogene 1978500 1979535 . + . ID=gene-NM058_10455;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=pseudogene;locus_tag=NM058_10455;pseudo=true CP101611.1 Protein Homology CDS 1978500 1979535 . + 0 ID=cds-NM058_10455;Parent=gene-NM058_10455;Note=frameshifted;gbkey=CDS;gene=gpsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390164.1;locus_tag=NM058_10455;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1979874 1980077 . + . ID=gene-NM058_10460;Name=NM058_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10460 CP101611.1 Protein Homology CDS 1979874 1980077 . + 0 ID=cds-UTX06805.1;Parent=gene-NM058_10460;Dbxref=NCBI_GP:UTX06805.1;Name=UTX06805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390163.1;locus_tag=NM058_10460;product=DUF2768 domain-containing protein;protein_id=UTX06805.1;transl_table=11 CP101611.1 Genbank gene 1980099 1980833 . + . ID=gene-NM058_10465;Name=NM058_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10465 CP101611.1 Protein Homology CDS 1980099 1980833 . + 0 ID=cds-UTX06806.1;Parent=gene-NM058_10465;Dbxref=NCBI_GP:UTX06806.1;Name=UTX06806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390162.1;locus_tag=NM058_10465;product=hypothetical protein;protein_id=UTX06806.1;transl_table=11 CP101611.1 Genbank gene 1981016 1982494 . + . ID=gene-NM058_10470;Name=spoIVA;gbkey=Gene;gene=spoIVA;gene_biotype=protein_coding;locus_tag=NM058_10470 CP101611.1 Protein Homology CDS 1981016 1982494 . + 0 ID=cds-UTX06807.1;Parent=gene-NM058_10470;Dbxref=NCBI_GP:UTX06807.1;Name=UTX06807.1;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=spoIVA;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390161.1;locus_tag=NM058_10470;product=stage IV sporulation protein A;protein_id=UTX06807.1;transl_table=11 CP101611.1 Genbank gene 1982866 1983144 . + . ID=gene-NM058_10475;Name=hbs;gbkey=Gene;gene=hbs;gene_biotype=protein_coding;gene_synonym=hbsU,hupA;locus_tag=NM058_10475 CP101611.1 Protein Homology CDS 1982866 1983144 . + 0 ID=cds-UTX06808.1;Parent=gene-NM058_10475;Dbxref=NCBI_GP:UTX06808.1;Name=UTX06808.1;gbkey=CDS;gene=hbs;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390160.1;locus_tag=NM058_10475;product=non-specific DNA-binding protein Hbs;protein_id=UTX06808.1;transl_table=11 CP101611.1 Genbank pseudogene 1983332 1983902 . + . ID=gene-NM058_10480;Name=folE;gbkey=Gene;gene=folE;gene_biotype=pseudogene;locus_tag=NM058_10480;pseudo=true CP101611.1 Protein Homology CDS 1983332 1983902 . + 0 ID=cds-NM058_10480;Parent=gene-NM058_10480;Note=frameshifted;Ontology_term=GO:0042559,GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=pteridine-containing compound biosynthetic process|0042559||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390159.1;locus_tag=NM058_10480;product=GTP cyclohydrolase I FolE;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1983924 1984151 . + . ID=gene-NM058_10485;Name=mtrB;gbkey=Gene;gene=mtrB;gene_biotype=protein_coding;locus_tag=NM058_10485 CP101611.1 Protein Homology CDS 1983924 1984151 . + 0 ID=cds-UTX06809.1;Parent=gene-NM058_10485;Dbxref=NCBI_GP:UTX06809.1;Name=UTX06809.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=mtrB;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription%2C termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390158.1;locus_tag=NM058_10485;product=trp RNA-binding attenuation protein MtrB;protein_id=UTX06809.1;transl_table=11 CP101611.1 Genbank pseudogene 1984314 1985068 . + . ID=gene-NM058_10490;Name=hepS;gbkey=Gene;gene=hepS;gene_biotype=pseudogene;locus_tag=NM058_10490;pseudo=true CP101611.1 Protein Homology CDS 1984314 1985068 . + 0 ID=cds-NM058_10490;Parent=gene-NM058_10490;Note=frameshifted;gbkey=CDS;gene=hepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390157.1;locus_tag=NM058_10490;product=heptaprenyl diphosphate synthase component 1;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1985075 1985776 . + . ID=gene-NM058_10495;Name=menG;gbkey=Gene;gene=menG;gene_biotype=protein_coding;locus_tag=NM058_10495 CP101611.1 Protein Homology CDS 1985075 1985776 . + 0 ID=cds-UTX06810.1;Parent=gene-NM058_10495;Dbxref=NCBI_GP:UTX06810.1;Name=UTX06810.1;Ontology_term=GO:0009234,GO:0008168;gbkey=CDS;gene=menG;go_function=methyltransferase activity|0008168||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390156.1;locus_tag=NM058_10495;product=demethylmenaquinone methyltransferase;protein_id=UTX06810.1;transl_table=11 CP101611.1 Genbank gene 1985802 1986764 . + . ID=gene-NM058_10500;Name=hepT;gbkey=Gene;gene=hepT;gene_biotype=protein_coding;locus_tag=NM058_10500 CP101611.1 Protein Homology CDS 1985802 1986764 . + 0 ID=cds-UTX07014.1;Parent=gene-NM058_10500;Dbxref=NCBI_GP:UTX07014.1;Name=UTX07014.1;Ontology_term=GO:0009234,GO:0000010;gbkey=CDS;gene=hepT;go_function=trans-hexaprenyltranstransferase activity|0000010||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016939103.1;locus_tag=NM058_10500;product=heptaprenyl diphosphate synthase component II;protein_id=UTX07014.1;transl_table=11 CP101611.1 Genbank gene 1986880 1987329 . + . ID=gene-NM058_10505;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=NM058_10505 CP101611.1 Protein Homology CDS 1986880 1987329 . + 0 ID=cds-UTX06811.1;Parent=gene-NM058_10505;Dbxref=NCBI_GP:UTX06811.1;Name=UTX06811.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390154.1;locus_tag=NM058_10505;product=nucleoside-diphosphate kinase;protein_id=UTX06811.1;transl_table=11 CP101611.1 Genbank gene 1987567 1988337 . + . ID=gene-NM058_10510;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=NM058_10510 CP101611.1 Protein Homology CDS 1987567 1988337 . + 0 ID=cds-UTX06812.1;Parent=gene-NM058_10510;Dbxref=NCBI_GP:UTX06812.1;Name=UTX06812.1;gbkey=CDS;gene=cheR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390153.2;locus_tag=NM058_10510;product=protein-glutamate O-methyltransferase CheR;protein_id=UTX06812.1;transl_table=11 CP101611.1 Genbank gene 1988412 1989584 . + . ID=gene-NM058_10515;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=NM058_10515 CP101611.1 Protein Homology CDS 1988412 1989584 . + 0 ID=cds-UTX06813.1;Parent=gene-NM058_10515;Dbxref=NCBI_GP:UTX06813.1;Name=UTX06813.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390152.3;locus_tag=NM058_10515;product=chorismate synthase;protein_id=UTX06813.1;transl_table=11 CP101611.1 Genbank gene 1989584 1990672 . + . ID=gene-NM058_10520;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=NM058_10520 CP101611.1 Protein Homology CDS 1989584 1990672 . + 0 ID=cds-UTX06814.1;Parent=gene-NM058_10520;Dbxref=NCBI_GP:UTX06814.1;Name=UTX06814.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390151.1;locus_tag=NM058_10520;product=3-dehydroquinate synthase;protein_id=UTX06814.1;transl_table=11 CP101611.1 Genbank gene 1990669 1991052 . + . ID=gene-NM058_10525;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=NM058_10525 CP101611.1 Protein Homology CDS 1990669 1991052 . + 0 ID=cds-UTX06815.1;Parent=gene-NM058_10525;Dbxref=NCBI_GP:UTX06815.1;Name=UTX06815.1;Ontology_term=GO:0009073,GO:0004106;gbkey=CDS;gene=aroH;go_function=chorismate mutase activity|0004106||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390150.1;locus_tag=NM058_10525;product=chorismate mutase;protein_id=UTX06815.1;transl_table=11 CP101611.1 Genbank gene 1991267 1992814 . + . ID=gene-NM058_10530;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=NM058_10530 CP101611.1 Protein Homology CDS 1991267 1992814 . + 0 ID=cds-UTX06816.1;Parent=gene-NM058_10530;Dbxref=NCBI_GP:UTX06816.1;Name=UTX06816.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390149.1;locus_tag=NM058_10530;product=anthranilate synthase component I;protein_id=UTX06816.1;transl_table=11 CP101611.1 Genbank gene 1992786 1993802 . + . ID=gene-NM058_10535;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=NM058_10535 CP101611.1 Protein Homology CDS 1992786 1993802 . + 0 ID=cds-UTX06817.1;Parent=gene-NM058_10535;Dbxref=NCBI_GP:UTX06817.1;Name=UTX06817.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390148.2;locus_tag=NM058_10535;product=anthranilate phosphoribosyltransferase;protein_id=UTX06817.1;transl_table=11 CP101611.1 Genbank gene 1993795 1994547 . + . ID=gene-NM058_10540;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=NM058_10540 CP101611.1 Protein Homology CDS 1993795 1994547 . + 0 ID=cds-UTX06818.1;Parent=gene-NM058_10540;Dbxref=NCBI_GP:UTX06818.1;Name=UTX06818.1;gbkey=CDS;gene=trpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004398090.1;locus_tag=NM058_10540;product=indole-3-glycerol phosphate synthase TrpC;protein_id=UTX06818.1;transl_table=11 CP101611.1 Genbank gene 1994552 1995199 . + . ID=gene-NM058_10545;Name=NM058_10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10545 CP101611.1 Protein Homology CDS 1994552 1995199 . + 0 ID=cds-UTX06819.1;Parent=gene-NM058_10545;Dbxref=NCBI_GP:UTX06819.1;Name=UTX06819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390146.3;locus_tag=NM058_10545;product=phosphoribosylanthranilate isomerase;protein_id=UTX06819.1;transl_table=11 CP101611.1 Genbank pseudogene 1995180 1996381 . + . ID=gene-NM058_10550;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=pseudogene;locus_tag=NM058_10550;pseudo=true CP101611.1 Protein Homology CDS 1995180 1996381 . + 0 ID=cds-NM058_10550;Parent=gene-NM058_10550;Note=frameshifted;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390145.2;locus_tag=NM058_10550;product=tryptophan synthase subunit beta;pseudo=true;transl_table=11 CP101611.1 Genbank gene 1996374 1997177 . + . ID=gene-NM058_10555;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=NM058_10555 CP101611.1 Protein Homology CDS 1996374 1997177 . + 0 ID=cds-UTX06820.1;Parent=gene-NM058_10555;Dbxref=NCBI_GP:UTX06820.1;Name=UTX06820.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390144.1;locus_tag=NM058_10555;product=tryptophan synthase subunit alpha;protein_id=UTX06820.1;transl_table=11 CP101611.1 Genbank gene 1997189 1998271 . + . ID=gene-NM058_10560;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=NM058_10560 CP101611.1 Protein Homology CDS 1997189 1998271 . + 0 ID=cds-UTX06821.1;Parent=gene-NM058_10560;Dbxref=NCBI_GP:UTX06821.1;Name=UTX06821.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390143.2;locus_tag=NM058_10560;product=histidinol-phosphate transaminase;protein_id=UTX06821.1;transl_table=11 CP101611.1 Genbank pseudogene 1998320 1999432 . + . ID=gene-NM058_10565;Name=NM058_10565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10565;pseudo=true CP101611.1 Protein Homology CDS 1998320 1999432 . + 0 ID=cds-NM058_10565;Parent=gene-NM058_10565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390142.1;locus_tag=NM058_10565;product=prephenate dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 1999444 2000729 . + . ID=gene-NM058_10570;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=pseudogene;locus_tag=NM058_10570;pseudo=true CP101611.1 Protein Homology CDS 1999444 2000729 . + 0 ID=cds-NM058_10570;Parent=gene-NM058_10570;Note=frameshifted;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390141.1;locus_tag=NM058_10570;product=3-phosphoshikimate 1-carboxyvinyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2001078 2002349 . + . ID=gene-NM058_10575;Name=NM058_10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10575 CP101611.1 Protein Homology CDS 2001078 2002349 . + 0 ID=cds-UTX06822.1;Parent=gene-NM058_10575;Dbxref=NCBI_GP:UTX06822.1;Name=UTX06822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390140.1;locus_tag=NM058_10575;product=tetratricopeptide repeat protein;protein_id=UTX06822.1;transl_table=11 CP101611.1 Genbank gene 2002421 2002960 . + . ID=gene-NM058_10580;Name=NM058_10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10580 CP101611.1 Protein Homology CDS 2002421 2002960 . + 0 ID=cds-UTX06823.1;Parent=gene-NM058_10580;Dbxref=NCBI_GP:UTX06823.1;Name=UTX06823.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390139.1;locus_tag=NM058_10580;product=ReoY family proteolytic degradation factor;protein_id=UTX06823.1;transl_table=11 CP101611.1 Genbank gene 2003015 2003461 . + . ID=gene-NM058_10585;Name=NM058_10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10585 CP101611.1 Protein Homology CDS 2003015 2003461 . + 0 ID=cds-UTX06824.1;Parent=gene-NM058_10585;Dbxref=NCBI_GP:UTX06824.1;Name=UTX06824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004398065.1;locus_tag=NM058_10585;product=YpiF family protein;protein_id=UTX06824.1;transl_table=11 CP101611.1 Genbank pseudogene 2003604 2004106 . + . ID=gene-NM058_10590;Name=NM058_10590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10590;pseudo=true CP101611.1 Protein Homology CDS 2003604 2004106 . + 0 ID=cds-NM058_10590;Parent=gene-NM058_10590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390137.1;locus_tag=NM058_10590;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2004108 2004782 . + . ID=gene-NM058_10595;Name=qcrB;gbkey=Gene;gene=qcrB;gene_biotype=protein_coding;locus_tag=NM058_10595 CP101611.1 Protein Homology CDS 2004108 2004782 . + 0 ID=cds-UTX06825.1;Parent=gene-NM058_10595;Dbxref=NCBI_GP:UTX06825.1;Name=UTX06825.1;gbkey=CDS;gene=qcrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390136.1;locus_tag=NM058_10595;product=menaquinol-cytochrome c reductase cytochrome b subunit;protein_id=UTX06825.1;transl_table=11 CP101611.1 Genbank pseudogene 2004817 2005583 . + . ID=gene-NM058_10600;Name=NM058_10600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10600;pseudo=true CP101611.1 Protein Homology CDS 2004817 2005583 . + 0 ID=cds-NM058_10600;Parent=gene-NM058_10600;Note=frameshifted;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390135.1;locus_tag=NM058_10600;product=c-type cytochrome;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2005695 2006288 . + . ID=gene-NM058_10605;Name=NM058_10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10605 CP101611.1 Protein Homology CDS 2005695 2006288 . + 0 ID=cds-UTX06826.1;Parent=gene-NM058_10605;Dbxref=NCBI_GP:UTX06826.1;Name=UTX06826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017696530.1;locus_tag=NM058_10605;product=DUF1405 domain-containing protein;protein_id=UTX06826.1;transl_table=11 CP101611.1 Genbank pseudogene 2006357 2007150 . + . ID=gene-NM058_10610;Name=ypjB;gbkey=Gene;gene=ypjB;gene_biotype=pseudogene;locus_tag=NM058_10610;pseudo=true CP101611.1 Protein Homology CDS 2006357 2007150 . + 0 ID=cds-NM058_10610;Parent=gene-NM058_10610;Note=frameshifted;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=ypjB;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390133.1;locus_tag=NM058_10610;product=sporulation protein YpjB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2007190 2008062 . - . ID=gene-NM058_10615;Name=NM058_10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10615 CP101611.1 Protein Homology CDS 2007190 2008062 . - 0 ID=cds-UTX06827.1;Parent=gene-NM058_10615;Dbxref=NCBI_GP:UTX06827.1;Name=UTX06827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390132.2;locus_tag=NM058_10615;product=YitT family protein;protein_id=UTX06827.1;transl_table=11 CP101611.1 Genbank gene 2008202 2008537 . + . ID=gene-NM058_10620;Name=NM058_10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10620 CP101611.1 Protein Homology CDS 2008202 2008537 . + 0 ID=cds-UTX06828.1;Parent=gene-NM058_10620;Dbxref=NCBI_GP:UTX06828.1;Name=UTX06828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390131.1;locus_tag=NM058_10620;product=nucleotide pyrophosphohydrolase;protein_id=UTX06828.1;transl_table=11 CP101611.1 Genbank gene 2008549 2009352 . + . ID=gene-NM058_10625;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=NM058_10625 CP101611.1 Protein Homology CDS 2008549 2009352 . + 0 ID=cds-UTX06829.1;Parent=gene-NM058_10625;Dbxref=NCBI_GP:UTX06829.1;Name=UTX06829.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390130.1;locus_tag=NM058_10625;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=UTX06829.1;transl_table=11 CP101611.1 Genbank gene 2009368 2009781 . + . ID=gene-NM058_10630;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=NM058_10630 CP101611.1 Protein Homology CDS 2009368 2009781 . + 0 ID=cds-UTX07015.1;Parent=gene-NM058_10630;Dbxref=NCBI_GP:UTX07015.1;Name=UTX07015.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390129.1;locus_tag=NM058_10630;product=methylglyoxal synthase;protein_id=UTX07015.1;transl_table=11 CP101611.1 Genbank pseudogene 2009774 2010482 . + . ID=gene-NM058_10635;Name=bshB1;gbkey=Gene;gene=bshB1;gene_biotype=pseudogene;locus_tag=NM058_10635;pseudo=true CP101611.1 Protein Homology CDS 2009774 2010482 . + 0 ID=cds-NM058_10635;Parent=gene-NM058_10635;Note=frameshifted;Ontology_term=GO:0019213;gbkey=CDS;gene=bshB1;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390128.2;locus_tag=NM058_10635;product=bacillithiol biosynthesis deacetylase BshB1;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2010479 2011611 . + . ID=gene-NM058_10640;Name=bshA;gbkey=Gene;gene=bshA;gene_biotype=pseudogene;locus_tag=NM058_10640;pseudo=true CP101611.1 Protein Homology CDS 2010479 2011611 . + 0 ID=cds-NM058_10640;Parent=gene-NM058_10640;Note=frameshifted;Ontology_term=GO:0071793;gbkey=CDS;gene=bshA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390127.1;locus_tag=NM058_10640;product=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2011616 2012808 . + . ID=gene-NM058_10645;Name=NM058_10645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10645;pseudo=true CP101611.1 Protein Homology CDS 2011616 2012808 . + 0 ID=cds-NM058_10645;Parent=gene-NM058_10645;Note=frameshifted;Ontology_term=GO:0001680,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390126.1;locus_tag=NM058_10645;product=CCA tRNA nucleotidyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2012793 2013769 . + . ID=gene-NM058_10650;Name=NM058_10650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10650;pseudo=true CP101611.1 Protein Homology CDS 2012793 2013769 . + 0 ID=cds-NM058_10650;Parent=gene-NM058_10650;Note=frameshifted;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390125.1;locus_tag=NM058_10650;product=biotin--[acetyl-CoA-carboxylase] ligase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2014015 2014848 . + . ID=gene-NM058_10655;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=NM058_10655 CP101611.1 Protein Homology CDS 2014015 2014848 . + 0 ID=cds-UTX06830.1;Parent=gene-NM058_10655;Dbxref=NCBI_GP:UTX06830.1;Name=UTX06830.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390124.1;locus_tag=NM058_10655;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=UTX06830.1;transl_table=11 CP101611.1 Genbank gene 2014850 2015710 . + . ID=gene-NM058_10660;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=NM058_10660 CP101611.1 Protein Homology CDS 2014850 2015710 . + 0 ID=cds-UTX06831.1;Parent=gene-NM058_10660;Dbxref=NCBI_GP:UTX06831.1;Name=UTX06831.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390123.1;locus_tag=NM058_10660;product=pantoate--beta-alanine ligase;protein_id=UTX06831.1;transl_table=11 CP101611.1 Genbank gene 2015712 2016095 . + . ID=gene-NM058_10665;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=NM058_10665 CP101611.1 Protein Homology CDS 2015712 2016095 . + 0 ID=cds-UTX06832.1;Parent=gene-NM058_10665;Dbxref=NCBI_GP:UTX06832.1;Name=UTX06832.1;Ontology_term=GO:0015940,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390122.1;locus_tag=NM058_10665;product=aspartate 1-decarboxylase;protein_id=UTX06832.1;transl_table=11 CP101611.1 Genbank pseudogene 2016221 2019010 . + . ID=gene-NM058_10670;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=pseudogene;locus_tag=NM058_10670;pseudo=true CP101611.1 Protein Homology CDS 2016221 2019010 . + 0 ID=cds-NM058_10670;Parent=gene-NM058_10670;Note=frameshifted;Ontology_term=GO:0006260,GO:0008408;gbkey=CDS;gene=dinG;go_function=3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390121.1;locus_tag=NM058_10670;product=ATP-dependent DNA helicase DinG;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2019152 2019322 . + . ID=gene-NM058_10675;Name=NM058_10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10675 CP101611.1 Protein Homology CDS 2019152 2019322 . + 0 ID=cds-UTX06833.1;Parent=gene-NM058_10675;Dbxref=NCBI_GP:UTX06833.1;Name=UTX06833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390120.1;locus_tag=NM058_10675;product=YpmA family protein;protein_id=UTX06833.1;transl_table=11 CP101611.1 Genbank pseudogene 2019331 2019813 . + . ID=gene-NM058_10680;Name=tseB;gbkey=Gene;gene=tseB;gene_biotype=pseudogene;locus_tag=NM058_10680;pseudo=true CP101611.1 Protein Homology CDS 2019331 2019813 . + 0 ID=cds-NM058_10680;Parent=gene-NM058_10680;Note=frameshifted;gbkey=CDS;gene=tseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390119.1;locus_tag=NM058_10680;product=cell wall elongation/penicillin-binding protein regulator TseB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2019836 2021017 . + . ID=gene-NM058_10685;Name=aspB;gbkey=Gene;gene=aspB;gene_biotype=protein_coding;locus_tag=NM058_10685 CP101611.1 Protein Homology CDS 2019836 2021017 . + 0 ID=cds-UTX06834.1;Parent=gene-NM058_10685;Dbxref=NCBI_GP:UTX06834.1;Name=UTX06834.1;gbkey=CDS;gene=aspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390118.1;locus_tag=NM058_10685;product=aspartate transaminase AspB;protein_id=UTX06834.1;transl_table=11 CP101611.1 Genbank gene 2021159 2022451 . + . ID=gene-NM058_10690;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=NM058_10690 CP101611.1 Protein Homology CDS 2021159 2022451 . + 0 ID=cds-UTX07016.1;Parent=gene-NM058_10690;Dbxref=NCBI_GP:UTX07016.1;Name=UTX07016.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390117.1;locus_tag=NM058_10690;product=asparagine--tRNA ligase;protein_id=UTX07016.1;transl_table=11 CP101611.1 Genbank gene 2022545 2023243 . + . ID=gene-NM058_10695;Name=dnaD;gbkey=Gene;gene=dnaD;gene_biotype=protein_coding;locus_tag=NM058_10695 CP101611.1 Protein Homology CDS 2022545 2023243 . + 0 ID=cds-UTX06835.1;Parent=gene-NM058_10695;Dbxref=NCBI_GP:UTX06835.1;Name=UTX06835.1;gbkey=CDS;gene=dnaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390116.1;locus_tag=NM058_10695;product=DNA replication protein DnaD;protein_id=UTX06835.1;transl_table=11 CP101611.1 Genbank gene 2023262 2023921 . + . ID=gene-NM058_10700;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=NM058_10700 CP101611.1 Protein Homology CDS 2023262 2023921 . + 0 ID=cds-UTX06836.1;Parent=gene-NM058_10700;Dbxref=NCBI_GP:UTX06836.1;Name=UTX06836.1;Ontology_term=GO:0006281,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390115.1;locus_tag=NM058_10700;product=endonuclease III;protein_id=UTX06836.1;transl_table=11 CP101611.1 Genbank gene 2023918 2024412 . + . ID=gene-NM058_10705;Name=NM058_10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10705 CP101611.1 Protein Homology CDS 2023918 2024412 . + 0 ID=cds-UTX06837.1;Parent=gene-NM058_10705;Dbxref=NCBI_GP:UTX06837.1;Name=UTX06837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390114.1;locus_tag=NM058_10705;product=hypothetical protein;protein_id=UTX06837.1;transl_table=11 CP101611.1 Genbank gene 2024484 2027237 . - . ID=gene-NM058_10710;Name=NM058_10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10710 CP101611.1 Protein Homology CDS 2024484 2027237 . - 0 ID=cds-UTX06838.1;Parent=gene-NM058_10710;Dbxref=NCBI_GP:UTX06838.1;Name=UTX06838.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390113.1;locus_tag=NM058_10710;product=PBP1A family penicillin-binding protein;protein_id=UTX06838.1;transl_table=11 CP101611.1 Genbank pseudogene 2027260 2027878 . - . ID=gene-NM058_10715;Name=recU;gbkey=Gene;gene=recU;gene_biotype=pseudogene;locus_tag=NM058_10715;pseudo=true CP101611.1 Protein Homology CDS 2027260 2027878 . - 0 ID=cds-NM058_10715;Parent=gene-NM058_10715;Note=frameshifted;Ontology_term=GO:0006281,GO:0003676,GO:0004518;gbkey=CDS;gene=recU;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390112.1;locus_tag=NM058_10715;product=Holliday junction resolvase RecU;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2027919 2028880 . + . ID=gene-NM058_10720;Name=NM058_10720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10720;pseudo=true CP101611.1 Protein Homology CDS 2027919 2028880 . + 0 ID=cds-NM058_10720;Parent=gene-NM058_10720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390111.1;locus_tag=NM058_10720;product=DUF2515 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2028906 2029010 . - . ID=gene-NM058_10725;Name=sspM;gbkey=Gene;gene=sspM;gene_biotype=protein_coding;locus_tag=NM058_10725 CP101611.1 Protein Homology CDS 2028906 2029010 . - 0 ID=cds-UTX06839.1;Parent=gene-NM058_10725;Dbxref=NCBI_GP:UTX06839.1;Name=UTX06839.1;gbkey=CDS;gene=sspM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054585.1;locus_tag=NM058_10725;product=acid-soluble spore protein SspM;protein_id=UTX06839.1;transl_table=11 CP101611.1 Genbank gene 2029209 2029454 . + . ID=gene-NM058_10730;Name=NM058_10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10730 CP101611.1 Protein Homology CDS 2029209 2029454 . + 0 ID=cds-UTX06840.1;Parent=gene-NM058_10730;Dbxref=NCBI_GP:UTX06840.1;Name=UTX06840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390110.1;locus_tag=NM058_10730;product=DUF5446 family protein;protein_id=UTX06840.1;transl_table=11 CP101611.1 Genbank gene 2029500 2029871 . + . ID=gene-NM058_10735;Name=NM058_10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10735 CP101611.1 Protein Homology CDS 2029500 2029871 . + 0 ID=cds-UTX06841.1;Parent=gene-NM058_10735;Dbxref=NCBI_GP:UTX06841.1;Name=UTX06841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390109.1;locus_tag=NM058_10735;product=YppE family protein;protein_id=UTX06841.1;transl_table=11 CP101611.1 Genbank gene 2029910 2030098 . - . ID=gene-NM058_10740;Name=NM058_10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10740 CP101611.1 Protein Homology CDS 2029910 2030098 . - 0 ID=cds-UTX06842.1;Parent=gene-NM058_10740;Dbxref=NCBI_GP:UTX06842.1;Name=UTX06842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390108.1;locus_tag=NM058_10740;product=YppF family protein;protein_id=UTX06842.1;transl_table=11 CP101611.1 Genbank pseudogene 2030285 2030651 . + . ID=gene-NM058_10745;Name=NM058_10745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10745;pseudo=true CP101611.1 Protein Homology CDS 2030285 2030651 . + 0 ID=cds-NM058_10745;Parent=gene-NM058_10745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390107.1;locus_tag=NM058_10745;product=YppG family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2030672 2031091 . - . ID=gene-NM058_10750;Name=NM058_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10750 CP101611.1 Protein Homology CDS 2030672 2031091 . - 0 ID=cds-UTX06843.1;Parent=gene-NM058_10750;Dbxref=NCBI_GP:UTX06843.1;Name=UTX06843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390106.1;locus_tag=NM058_10750;product=Hsp20/alpha crystallin family protein;protein_id=UTX06843.1;transl_table=11 CP101611.1 Genbank gene 2031229 2031735 . + . ID=gene-NM058_10755;Name=NM058_10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10755 CP101611.1 Protein Homology CDS 2031229 2031735 . + 0 ID=cds-UTX07017.1;Parent=gene-NM058_10755;Dbxref=NCBI_GP:UTX07017.1;Name=UTX07017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390105.1;locus_tag=NM058_10755;product=PTS glucose transporter subunit IIA;protein_id=UTX07017.1;transl_table=11 CP101611.1 Genbank pseudogene 2031837 2034084 . + . ID=gene-NM058_10760;Name=mrfA;gbkey=Gene;gene=mrfA;gene_biotype=pseudogene;gene_synonym=yprA;locus_tag=NM058_10760;pseudo=true CP101611.1 Protein Homology CDS 2031837 2034084 . + 0 ID=cds-NM058_10760;Parent=gene-NM058_10760;Note=part of a mitomycin C specific DNA repair pathway%3B frameshifted;gbkey=CDS;gene=mrfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390104.1;locus_tag=NM058_10760;product=ATP-dependent helicase MrfA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2034100 2035353 . + . ID=gene-NM058_10765;Name=NM058_10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10765 CP101611.1 Protein Homology CDS 2034100 2035353 . + 0 ID=cds-UTX06844.1;Parent=gene-NM058_10765;Dbxref=NCBI_GP:UTX06844.1;Name=UTX06844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390103.1;locus_tag=NM058_10765;product=ribonuclease H-like domain-containing protein;protein_id=UTX06844.1;transl_table=11 CP101611.1 Genbank gene 2035453 2035581 . + . ID=gene-NM058_10770;Name=NM058_10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10770 CP101611.1 Protein Homology CDS 2035453 2035581 . + 0 ID=cds-UTX06845.1;Parent=gene-NM058_10770;Dbxref=NCBI_GP:UTX06845.1;Name=UTX06845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513975.1;locus_tag=NM058_10770;product=hypothetical protein;protein_id=UTX06845.1;transl_table=11 CP101611.1 Genbank gene 2035665 2035892 . + . ID=gene-NM058_10775;Name=cotD;gbkey=Gene;gene=cotD;gene_biotype=protein_coding;locus_tag=NM058_10775 CP101611.1 Protein Homology CDS 2035665 2035892 . + 0 ID=cds-UTX06846.1;Parent=gene-NM058_10775;Dbxref=NCBI_GP:UTX06846.1;Name=UTX06846.1;gbkey=CDS;gene=cotD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390102.1;locus_tag=NM058_10775;product=spore coat protein CotD;protein_id=UTX06846.1;transl_table=11 CP101611.1 Genbank gene 2035982 2036527 . + . ID=gene-NM058_10780;Name=NM058_10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10780 CP101611.1 Protein Homology CDS 2035982 2036527 . + 0 ID=cds-UTX07018.1;Parent=gene-NM058_10780;Dbxref=NCBI_GP:UTX07018.1;Name=UTX07018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258726.1;locus_tag=NM058_10780;product=DUF1273 domain-containing protein;protein_id=UTX07018.1;transl_table=11 CP101611.1 Genbank gene 2036606 2036902 . + . ID=gene-NM058_10785;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=NM058_10785 CP101611.1 Protein Homology CDS 2036606 2036902 . + 0 ID=cds-UTX06847.1;Parent=gene-NM058_10785;Dbxref=NCBI_GP:UTX06847.1;Name=UTX06847.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390100.1;locus_tag=NM058_10785;product=cell division regulator GpsB;protein_id=UTX06847.1;transl_table=11 CP101611.1 Genbank gene 2036968 2037349 . + . ID=gene-NM058_10790;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=NM058_10790 CP101611.1 cmsearch RNase_P_RNA 2036968 2037349 . + . ID=rna-NM058_10790;Parent=gene-NM058_10790;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_10790;product=RNase P RNA component class B CP101611.1 cmsearch exon 2036968 2037349 . + . ID=exon-NM058_10790-1;Parent=rna-NM058_10790;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_10790;product=RNase P RNA component class B CP101611.1 Genbank gene 2037450 2038607 . + . ID=gene-NM058_10795;Name=NM058_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10795 CP101611.1 Protein Homology CDS 2037450 2038607 . + 0 ID=cds-UTX06848.1;Parent=gene-NM058_10795;Dbxref=NCBI_GP:UTX06848.1;Name=UTX06848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390099.1;locus_tag=NM058_10795;product=class I SAM-dependent RNA methyltransferase;protein_id=UTX06848.1;transl_table=11 CP101611.1 Genbank gene 2038660 2038812 . - . ID=gene-NM058_10800;Name=NM058_10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10800 CP101611.1 Protein Homology CDS 2038660 2038812 . - 0 ID=cds-UTX06849.1;Parent=gene-NM058_10800;Dbxref=NCBI_GP:UTX06849.1;Name=UTX06849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097754.1;locus_tag=NM058_10800;product=YpzG family protein;protein_id=UTX06849.1;transl_table=11 CP101611.1 Genbank gene 2038975 2039166 . + . ID=gene-NM058_10805;Name=NM058_10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10805 CP101611.1 Protein Homology CDS 2038975 2039166 . + 0 ID=cds-UTX07019.1;Parent=gene-NM058_10805;Dbxref=NCBI_GP:UTX07019.1;Name=UTX07019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390098.1;locus_tag=NM058_10805;product=hypothetical protein;protein_id=UTX07019.1;transl_table=11 CP101611.1 Genbank gene 2039270 2041195 . + . ID=gene-NM058_10810;Name=NM058_10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10810 CP101611.1 Protein Homology CDS 2039270 2041195 . + 0 ID=cds-UTX06850.1;Parent=gene-NM058_10810;Dbxref=NCBI_GP:UTX06850.1;Name=UTX06850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390097.1;locus_tag=NM058_10810;product=ATP-dependent DNA helicase;protein_id=UTX06850.1;transl_table=11 CP101611.1 Genbank gene 2041238 2042002 . - . ID=gene-NM058_10815;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=NM058_10815 CP101611.1 Protein Homology CDS 2041238 2042002 . - 0 ID=cds-UTX06851.1;Parent=gene-NM058_10815;Dbxref=NCBI_GP:UTX06851.1;Name=UTX06851.1;gbkey=CDS;gene=kduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390096.1;locus_tag=NM058_10815;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=UTX06851.1;transl_table=11 CP101611.1 Genbank gene 2042004 2042831 . - . ID=gene-NM058_10820;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=NM058_10820 CP101611.1 Protein Homology CDS 2042004 2042831 . - 0 ID=cds-UTX06852.1;Parent=gene-NM058_10820;Dbxref=NCBI_GP:UTX06852.1;Name=UTX06852.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390095.1;locus_tag=NM058_10820;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=UTX06852.1;transl_table=11 CP101611.1 Genbank gene 2043052 2044071 . + . ID=gene-NM058_10825;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=NM058_10825 CP101611.1 Protein Homology CDS 2043052 2044071 . + 0 ID=cds-UTX06853.1;Parent=gene-NM058_10825;Dbxref=NCBI_GP:UTX06853.1;Name=UTX06853.1;gbkey=CDS;gene=kdgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390094.1;locus_tag=NM058_10825;product=pectin utilization transcriptional regulator KdgR;protein_id=UTX06853.1;transl_table=11 CP101611.1 Genbank gene 2044109 2045083 . + . ID=gene-NM058_10830;Name=kdgK;gbkey=Gene;gene=kdgK;gene_biotype=protein_coding;locus_tag=NM058_10830 CP101611.1 Protein Homology CDS 2044109 2045083 . + 0 ID=cds-UTX06854.1;Parent=gene-NM058_10830;Dbxref=NCBI_GP:UTX06854.1;Name=UTX06854.1;gbkey=CDS;gene=kdgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390093.1;locus_tag=NM058_10830;product=2-dehydro-3-deoxygluconokinase;protein_id=UTX06854.1;transl_table=11 CP101611.1 Genbank gene 2045085 2045675 . + . ID=gene-NM058_10835;Name=eda;gbkey=Gene;gene=eda;gene_biotype=protein_coding;locus_tag=NM058_10835 CP101611.1 Protein Homology CDS 2045085 2045675 . + 0 ID=cds-UTX06855.1;Parent=gene-NM058_10835;Dbxref=NCBI_GP:UTX06855.1;Name=UTX06855.1;Ontology_term=GO:0009084,GO:0009255,GO:0008675,GO:0008700;gbkey=CDS;gene=eda;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA,4-hydroxy-2-oxoglutarate aldolase activity|0008700||IEA;go_process=glutamine family amino acid biosynthetic process|0009084||IEA,Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390092.1;locus_tag=NM058_10835;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=UTX06855.1;transl_table=11 CP101611.1 Genbank gene 2045720 2046712 . + . ID=gene-NM058_10840;Name=kdgT;gbkey=Gene;gene=kdgT;gene_biotype=protein_coding;locus_tag=NM058_10840 CP101611.1 Protein Homology CDS 2045720 2046712 . + 0 ID=cds-UTX06856.1;Parent=gene-NM058_10840;Dbxref=NCBI_GP:UTX06856.1;Name=UTX06856.1;Ontology_term=GO:0046411,GO:0015649;gbkey=CDS;gene=kdgT;go_function=2-keto-3-deoxygluconate:proton symporter activity|0015649||IEA;go_process=2-keto-3-deoxygluconate transmembrane transport|0046411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390091.1;locus_tag=NM058_10840;product=2-keto-3-deoxygluconate transporter;protein_id=UTX06856.1;transl_table=11 CP101611.1 Genbank gene 2046825 2048330 . + . ID=gene-NM058_10845;Name=ypwA;gbkey=Gene;gene=ypwA;gene_biotype=protein_coding;locus_tag=NM058_10845 CP101611.1 Protein Homology CDS 2046825 2048330 . + 0 ID=cds-UTX06857.1;Parent=gene-NM058_10845;Dbxref=NCBI_GP:UTX06857.1;Name=UTX06857.1;gbkey=CDS;gene=ypwA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015714143.1;locus_tag=NM058_10845;product=carboxypeptidase;protein_id=UTX06857.1;transl_table=11 CP101611.1 cmsearch riboswitch 2048472 2048571 . + . ID=id-CP101611.1:2048472..2048571;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 2048662 2049246 . + . ID=gene-NM058_10850;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=NM058_10850 CP101611.1 Protein Homology CDS 2048662 2049246 . + 0 ID=cds-UTX06858.1;Parent=gene-NM058_10850;Dbxref=NCBI_GP:UTX06858.1;Name=UTX06858.1;Ontology_term=GO:0046110,GO:0000310;gbkey=CDS;gene=xpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390089.1;locus_tag=NM058_10850;product=xanthine phosphoribosyltransferase;protein_id=UTX06858.1;transl_table=11 CP101611.1 Genbank pseudogene 2049243 2050558 . + . ID=gene-NM058_10855;Name=pbuX;gbkey=Gene;gene=pbuX;gene_biotype=pseudogene;locus_tag=NM058_10855;pseudo=true CP101611.1 Protein Homology CDS 2049243 2050558 . + 0 ID=cds-NM058_10855;Parent=gene-NM058_10855;Note=frameshifted;gbkey=CDS;gene=pbuX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390088.1;locus_tag=NM058_10855;product=xanthine permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2050631 2051728 . + . ID=gene-NM058_10860;Name=NM058_10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10860 CP101611.1 Protein Homology CDS 2050631 2051728 . + 0 ID=cds-UTX06859.1;Parent=gene-NM058_10860;Dbxref=NCBI_GP:UTX06859.1;Name=UTX06859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390087.1;locus_tag=NM058_10860;product=type III polyketide synthase;protein_id=UTX06859.1;transl_table=11 CP101611.1 Genbank gene 2051732 2052238 . + . ID=gene-NM058_10865;Name=bpsB;gbkey=Gene;gene=bpsB;gene_biotype=protein_coding;locus_tag=NM058_10865 CP101611.1 Protein Homology CDS 2051732 2052238 . + 0 ID=cds-UTX06860.1;Parent=gene-NM058_10865;Dbxref=NCBI_GP:UTX06860.1;Name=UTX06860.1;gbkey=CDS;gene=bpsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390086.1;locus_tag=NM058_10865;product=alkylpyrone methyltransferase;protein_id=UTX06860.1;transl_table=11 CP101611.1 Genbank gene 2052309 2052398 . + . ID=gene-NM058_10870;Name=fbpC;gbkey=Gene;gene=fbpC;gene_biotype=protein_coding;locus_tag=NM058_10870 CP101611.1 Protein Homology CDS 2052309 2052398 . + 0 ID=cds-UTX06861.1;Parent=gene-NM058_10870;Dbxref=NCBI_GP:UTX06861.1;Name=UTX06861.1;gbkey=CDS;gene=fbpC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513974.1;locus_tag=NM058_10870;product=Fur-regulated basic protein FbpC;protein_id=UTX06861.1;transl_table=11 CP101611.1 Genbank pseudogene 2052573 2056151 . + . ID=gene-NM058_10875;Name=NM058_10875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10875;pseudo=true CP101611.1 Protein Homology CDS 2052573 2056151 . + 0 ID=cds-NM058_10875;Parent=gene-NM058_10875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390085.1;locus_tag=NM058_10875;product=dynamin family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2056216 2056473 . + . ID=gene-NM058_10880;Name=NM058_10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10880 CP101611.1 Protein Homology CDS 2056216 2056473 . + 0 ID=cds-UTX06862.1;Parent=gene-NM058_10880;Dbxref=NCBI_GP:UTX06862.1;Name=UTX06862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390084.1;locus_tag=NM058_10880;product=YpbS family protein;protein_id=UTX06862.1;transl_table=11 CP101611.1 Genbank gene 2056549 2056695 . + . ID=gene-NM058_10885;Name=NM058_10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10885 CP101611.1 Protein Homology CDS 2056549 2056695 . + 0 ID=cds-UTX06863.1;Parent=gene-NM058_10885;Dbxref=NCBI_GP:UTX06863.1;Name=UTX06863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097753.1;locus_tag=NM058_10885;product=hypothetical protein;protein_id=UTX06863.1;transl_table=11 CP101611.1 Genbank gene 2056795 2057685 . + . ID=gene-NM058_10890;Name=exnP;gbkey=Gene;gene=exnP;gene_biotype=protein_coding;locus_tag=NM058_10890 CP101611.1 Protein Homology CDS 2056795 2057685 . + 0 ID=cds-UTX06864.1;Parent=gene-NM058_10890;Dbxref=NCBI_GP:UTX06864.1;Name=UTX06864.1;gbkey=CDS;gene=exnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390083.1;locus_tag=NM058_10890;product=5'-3' exonuclease ExnP;protein_id=UTX06864.1;transl_table=11 CP101611.1 Genbank gene 2057694 2057822 . - . ID=gene-NM058_10895;Name=sspL;gbkey=Gene;gene=sspL;gene_biotype=protein_coding;locus_tag=NM058_10895 CP101611.1 Protein Homology CDS 2057694 2057822 . - 0 ID=cds-UTX06865.1;Parent=gene-NM058_10895;Dbxref=NCBI_GP:UTX06865.1;Name=UTX06865.1;gbkey=CDS;gene=sspL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054584.1;locus_tag=NM058_10895;product=small%2C acid-soluble spore protein L;protein_id=UTX06865.1;transl_table=11 CP101611.1 Genbank gene 2057863 2058261 . - . ID=gene-NM058_10900;Name=NM058_10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10900 CP101611.1 Protein Homology CDS 2057863 2058261 . - 0 ID=cds-UTX06866.1;Parent=gene-NM058_10900;Dbxref=NCBI_GP:UTX06866.1;Name=UTX06866.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390082.1;locus_tag=NM058_10900;product=reverse transcriptase-like protein;protein_id=UTX06866.1;transl_table=11 CP101611.1 Genbank pseudogene 2058261 2058949 . - . ID=gene-NM058_10905;Name=NM058_10905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10905;pseudo=true CP101611.1 Protein Homology CDS 2058261 2058949 . - 0 ID=cds-NM058_10905;Parent=gene-NM058_10905;Note=frameshifted;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390081.1;locus_tag=NM058_10905;product=queuosine precursor transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2059032 2059712 . + . ID=gene-NM058_10910;Name=NM058_10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10910 CP101611.1 Protein Homology CDS 2059032 2059712 . + 0 ID=cds-UTX07020.1;Parent=gene-NM058_10910;Dbxref=NCBI_GP:UTX07020.1;Name=UTX07020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390080.2;locus_tag=NM058_10910;product=ribonuclease H family protein;protein_id=UTX07020.1;transl_table=11 CP101611.1 Genbank gene 2059705 2059887 . + . ID=gene-NM058_10915;Name=NM058_10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10915 CP101611.1 Protein Homology CDS 2059705 2059887 . + 0 ID=cds-UTX06867.1;Parent=gene-NM058_10915;Dbxref=NCBI_GP:UTX06867.1;Name=UTX06867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390079.1;locus_tag=NM058_10915;product=zinc-finger domain-containing protein;protein_id=UTX06867.1;transl_table=11 CP101611.1 Genbank gene 2059916 2060185 . - . ID=gene-NM058_10920;Name=NM058_10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10920 CP101611.1 Protein Homology CDS 2059916 2060185 . - 0 ID=cds-UTX06868.1;Parent=gene-NM058_10920;Dbxref=NCBI_GP:UTX06868.1;Name=UTX06868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390078.1;locus_tag=NM058_10920;product=DUF2564 family protein;protein_id=UTX06868.1;transl_table=11 CP101611.1 Genbank pseudogene 2060341 2060522 . + . ID=gene-NM058_10925;Name=NM058_10925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10925;pseudo=true CP101611.1 Protein Homology CDS 2060341 2060522 . + 0 ID=cds-NM058_10925;Parent=gene-NM058_10925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390077.1;locus_tag=NM058_10925;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2060566 2060766 . - . ID=gene-NM058_10930;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=NM058_10930 CP101611.1 Protein Homology CDS 2060566 2060766 . - 0 ID=cds-UTX06869.1;Parent=gene-NM058_10930;Dbxref=NCBI_GP:UTX06869.1;Name=UTX06869.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003230776.1;locus_tag=NM058_10930;product=cold-shock protein CspD;protein_id=UTX06869.1;transl_table=11 CP101611.1 Genbank gene 2060782 2060910 . - . ID=gene-NM058_10935;Name=NM058_10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10935 CP101611.1 Protein Homology CDS 2060782 2060910 . - 0 ID=cds-UTX06870.1;Parent=gene-NM058_10935;Dbxref=NCBI_GP:UTX06870.1;Name=UTX06870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513973.1;locus_tag=NM058_10935;product=hypothetical protein;protein_id=UTX06870.1;transl_table=11 CP101611.1 Genbank gene 2061010 2062158 . - . ID=gene-NM058_10940;Name=NM058_10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10940 CP101611.1 Protein Homology CDS 2061010 2062158 . - 0 ID=cds-UTX06871.1;Parent=gene-NM058_10940;Dbxref=NCBI_GP:UTX06871.1;Name=UTX06871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390075.1;locus_tag=NM058_10940;product=diglucosyl diacylglycerol synthase;protein_id=UTX06871.1;transl_table=11 CP101611.1 Genbank gene 2062389 2063294 . - . ID=gene-NM058_10945;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=NM058_10945 CP101611.1 Protein Homology CDS 2062389 2063294 . - 0 ID=cds-UTX06872.1;Parent=gene-NM058_10945;Dbxref=NCBI_GP:UTX06872.1;Name=UTX06872.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390074.2;locus_tag=NM058_10945;product=homoserine O-succinyltransferase;protein_id=UTX06872.1;transl_table=11 CP101611.1 Genbank gene 2063633 2064115 . + . ID=gene-NM058_10950;Name=NM058_10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10950 CP101611.1 Protein Homology CDS 2063633 2064115 . + 0 ID=cds-UTX06873.1;Parent=gene-NM058_10950;Dbxref=NCBI_GP:UTX06873.1;Name=UTX06873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390073.1;locus_tag=NM058_10950;product=glutathione peroxidase;protein_id=UTX06873.1;transl_table=11 CP101611.1 Genbank pseudogene 2064129 2064745 . + . ID=gene-NM058_10955;Name=NM058_10955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10955;pseudo=true CP101611.1 Protein Homology CDS 2064129 2064745 . + 0 ID=cds-NM058_10955;Parent=gene-NM058_10955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390072.1;locus_tag=NM058_10955;product=HD domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2064805 2065938 . + . ID=gene-NM058_10960;Name=NM058_10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10960 CP101611.1 Protein Homology CDS 2064805 2065938 . + 0 ID=cds-UTX06874.1;Parent=gene-NM058_10960;Dbxref=NCBI_GP:UTX06874.1;Name=UTX06874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390071.1;locus_tag=NM058_10960;product=conserved virulence factor C family protein;protein_id=UTX06874.1;transl_table=11 CP101611.1 Genbank gene 2066225 2067901 . + . ID=gene-NM058_10965;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=NM058_10965 CP101611.1 Protein Homology CDS 2066225 2067901 . + 0 ID=cds-UTX06875.1;Parent=gene-NM058_10965;Dbxref=NCBI_GP:UTX06875.1;Name=UTX06875.1;Ontology_term=GO:0009097,GO:0009099,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390070.2;locus_tag=NM058_10965;product=dihydroxy-acid dehydratase;protein_id=UTX06875.1;transl_table=11 CP101611.1 Genbank gene 2068008 2068442 . + . ID=gene-NM058_10970;Name=brxA;gbkey=Gene;gene=brxA;gene_biotype=protein_coding;locus_tag=NM058_10970 CP101611.1 Protein Homology CDS 2068008 2068442 . + 0 ID=cds-UTX06876.1;Parent=gene-NM058_10970;Dbxref=NCBI_GP:UTX06876.1;Name=UTX06876.1;gbkey=CDS;gene=brxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390069.1;locus_tag=NM058_10970;product=bacilliredoxin BrxA;protein_id=UTX06876.1;transl_table=11 CP101611.1 Genbank gene 2068482 2069267 . + . ID=gene-NM058_10975;Name=NM058_10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10975 CP101611.1 Protein Homology CDS 2068482 2069267 . + 0 ID=cds-UTX06877.1;Parent=gene-NM058_10975;Dbxref=NCBI_GP:UTX06877.1;Name=UTX06877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003218230.1;locus_tag=NM058_10975;product=class I SAM-dependent methyltransferase;protein_id=UTX06877.1;transl_table=11 CP101611.1 Genbank gene 2069527 2070141 . + . ID=gene-NM058_10980;Name=NM058_10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10980 CP101611.1 Protein Homology CDS 2069527 2070141 . + 0 ID=cds-UTX06878.1;Parent=gene-NM058_10980;Dbxref=NCBI_GP:UTX06878.1;Name=UTX06878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390067.1;locus_tag=NM058_10980;product=YpjP family protein;protein_id=UTX06878.1;transl_table=11 CP101611.1 Genbank gene 2070159 2070692 . + . ID=gene-NM058_10985;Name=NM058_10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_10985 CP101611.1 Protein Homology CDS 2070159 2070692 . + 0 ID=cds-UTX06879.1;Parent=gene-NM058_10985;Dbxref=NCBI_GP:UTX06879.1;Name=UTX06879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390066.1;locus_tag=NM058_10985;product=phosphatidylglycerophosphatase A;protein_id=UTX06879.1;transl_table=11 CP101611.1 Genbank pseudogene 2070776 2071569 . + . ID=gene-NM058_10990;Name=NM058_10990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_10990;pseudo=true CP101611.1 Protein Homology CDS 2070776 2071569 . + 0 ID=cds-NM058_10990;Parent=gene-NM058_10990;Note=frameshifted;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390065.1;locus_tag=NM058_10990;product=thymidylate synthase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2071566 2072072 . + . ID=gene-NM058_10995;Name=dfrA;gbkey=Gene;gene=dfrA;gene_biotype=protein_coding;locus_tag=NM058_10995 CP101611.1 Protein Homology CDS 2071566 2072072 . + 0 ID=cds-UTX06880.1;Parent=gene-NM058_10995;Dbxref=NCBI_GP:UTX06880.1;Name=UTX06880.1;gbkey=CDS;gene=dfrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390064.1;locus_tag=NM058_10995;product=dihydrofolate reductase DfrA;protein_id=UTX06880.1;transl_table=11 CP101611.1 Genbank gene 2072073 2072693 . + . ID=gene-NM058_11000;Name=NM058_11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11000 CP101611.1 Protein Homology CDS 2072073 2072693 . + 0 ID=cds-UTX06881.1;Parent=gene-NM058_11000;Dbxref=NCBI_GP:UTX06881.1;Name=UTX06881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390063.2;locus_tag=NM058_11000;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=UTX06881.1;transl_table=11 CP101611.1 Genbank gene 2072726 2073367 . - . ID=gene-NM058_11005;Name=NM058_11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11005 CP101611.1 Protein Homology CDS 2072726 2073367 . - 0 ID=cds-UTX06882.1;Parent=gene-NM058_11005;Dbxref=NCBI_GP:UTX06882.1;Name=UTX06882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390062.1;locus_tag=NM058_11005;product=hemolysin III family protein;protein_id=UTX06882.1;transl_table=11 CP101611.1 Genbank gene 2073388 2074383 . - . ID=gene-NM058_11010;Name=NM058_11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11010 CP101611.1 Protein Homology CDS 2073388 2074383 . - 0 ID=cds-UTX06883.1;Parent=gene-NM058_11010;Dbxref=NCBI_GP:UTX06883.1;Name=UTX06883.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390061.1;locus_tag=NM058_11010;product=sigma 54-interacting transcriptional regulator;protein_id=UTX06883.1;transl_table=11 CP101611.1 Genbank gene 2074631 2075899 . + . ID=gene-NM058_11015;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=NM058_11015 CP101611.1 Protein Homology CDS 2074631 2075899 . + 0 ID=cds-UTX06884.1;Parent=gene-NM058_11015;Dbxref=NCBI_GP:UTX06884.1;Name=UTX06884.1;Ontology_term=GO:0006520,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390060.1;locus_tag=NM058_11015;product=threonine ammonia-lyase IlvA;protein_id=UTX06884.1;transl_table=11 CP101611.1 Genbank gene 2075985 2076236 . + . ID=gene-NM058_11020;Name=NM058_11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11020 CP101611.1 Protein Homology CDS 2075985 2076236 . + 0 ID=cds-UTX06885.1;Parent=gene-NM058_11020;Dbxref=NCBI_GP:UTX06885.1;Name=UTX06885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390059.1;locus_tag=NM058_11020;product=YpmP family protein;protein_id=UTX06885.1;transl_table=11 CP101611.1 Genbank gene 2076386 2076967 . + . ID=gene-NM058_11025;Name=scuA;gbkey=Gene;gene=scuA;gene_biotype=protein_coding;locus_tag=NM058_11025 CP101611.1 Protein Homology CDS 2076386 2076967 . + 0 ID=cds-UTX06886.1;Parent=gene-NM058_11025;Dbxref=NCBI_GP:UTX06886.1;Name=UTX06886.1;gbkey=CDS;gene=scuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390058.2;locus_tag=NM058_11025;product=cytochrome c oxidase assembly accessory protein ScuA;protein_id=UTX06886.1;transl_table=11 CP101611.1 Genbank gene 2077045 2077812 . + . ID=gene-NM058_11030;Name=NM058_11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11030 CP101611.1 Protein Homology CDS 2077045 2077812 . + 0 ID=cds-UTX06887.1;Parent=gene-NM058_11030;Dbxref=NCBI_GP:UTX06887.1;Name=UTX06887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390057.1;locus_tag=NM058_11030;product=SGNH/GDSL hydrolase family protein;protein_id=UTX06887.1;transl_table=11 CP101611.1 Genbank gene 2077822 2078385 . + . ID=gene-NM058_11035;Name=NM058_11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11035 CP101611.1 Protein Homology CDS 2077822 2078385 . + 0 ID=cds-UTX06888.1;Parent=gene-NM058_11035;Dbxref=NCBI_GP:UTX06888.1;Name=UTX06888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390056.1;locus_tag=NM058_11035;product=YpmS family protein;protein_id=UTX06888.1;transl_table=11 CP101611.1 Genbank gene 2078398 2078592 . + . ID=gene-NM058_11040;Name=ypmT;gbkey=Gene;gene=ypmT;gene_biotype=protein_coding;locus_tag=NM058_11040 CP101611.1 Protein Homology CDS 2078398 2078592 . + 0 ID=cds-UTX06889.1;Parent=gene-NM058_11040;Dbxref=NCBI_GP:UTX06889.1;Name=UTX06889.1;gbkey=CDS;gene=ypmT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390055.1;locus_tag=NM058_11040;product=protein YpmT;protein_id=UTX06889.1;transl_table=11 CP101611.1 Genbank pseudogene 2078663 2079999 . + . ID=gene-NM058_11045;Name=NM058_11045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11045;pseudo=true CP101611.1 Protein Homology CDS 2078663 2079999 . + 0 ID=cds-NM058_11045;Parent=gene-NM058_11045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390054.1;locus_tag=NM058_11045;product=MATE family efflux transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2080050 2080475 . - . ID=gene-NM058_11050;Name=NM058_11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11050 CP101611.1 Protein Homology CDS 2080050 2080475 . - 0 ID=cds-UTX06890.1;Parent=gene-NM058_11050;Dbxref=NCBI_GP:UTX06890.1;Name=UTX06890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390053.1;locus_tag=NM058_11050;product=MarR family transcriptional regulator;protein_id=UTX06890.1;transl_table=11 CP101611.1 Genbank gene 2080657 2081139 . + . ID=gene-NM058_11055;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=NM058_11055 CP101611.1 Protein Homology CDS 2080657 2081139 . + 0 ID=cds-UTX06891.1;Parent=gene-NM058_11055;Dbxref=NCBI_GP:UTX06891.1;Name=UTX06891.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003182781.1;locus_tag=NM058_11055;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=UTX06891.1;transl_table=11 CP101611.1 Genbank gene 2081140 2081574 . + . ID=gene-NM058_11060;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=NM058_11060 CP101611.1 Protein Homology CDS 2081140 2081574 . + 0 ID=cds-UTX06892.1;Parent=gene-NM058_11060;Dbxref=NCBI_GP:UTX06892.1;Name=UTX06892.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390051.1;locus_tag=NM058_11060;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=UTX06892.1;transl_table=11 CP101611.1 Genbank gene 2082046 2083230 . - . ID=gene-NM058_11065;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=NM058_11065 CP101611.1 Protein Homology CDS 2082046 2083230 . - 0 ID=cds-UTX07021.1;Parent=gene-NM058_11065;Dbxref=NCBI_GP:UTX07021.1;Name=UTX07021.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389646.1;locus_tag=NM058_11065;product=alanine racemase;protein_id=UTX07021.1;transl_table=11 CP101611.1 Genbank gene 2083653 2084801 . + . ID=gene-NM058_11070;Name=NM058_11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11070 CP101611.1 Protein Homology CDS 2083653 2084801 . + 0 ID=cds-UTX06893.1;Parent=gene-NM058_11070;Dbxref=NCBI_GP:UTX06893.1;Name=UTX06893.1;Ontology_term=GO:0016158;gbkey=CDS;go_function=3-phytase activity|0016158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389861.1;locus_tag=NM058_11070;product=phytase;protein_id=UTX06893.1;transl_table=11 CP101611.1 Genbank gene 2084868 2085821 . - . ID=gene-NM058_11075;Name=NM058_11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11075 CP101611.1 Protein Homology CDS 2084868 2085821 . - 0 ID=cds-UTX06894.1;Parent=gene-NM058_11075;Dbxref=NCBI_GP:UTX06894.1;Name=UTX06894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389860.2;locus_tag=NM058_11075;product=DUF3880 domain-containing protein;protein_id=UTX06894.1;transl_table=11 CP101611.1 Genbank gene 2085828 2086214 . - . ID=gene-NM058_11080;Name=NM058_11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11080 CP101611.1 Protein Homology CDS 2085828 2086214 . - 0 ID=cds-UTX06895.1;Parent=gene-NM058_11080;Dbxref=NCBI_GP:UTX06895.1;Name=UTX06895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389859.1;locus_tag=NM058_11080;product=protein CgeA;protein_id=UTX06895.1;transl_table=11 CP101611.1 Genbank gene 2086421 2086726 . + . ID=gene-NM058_11085;Name=NM058_11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11085 CP101611.1 Protein Homology CDS 2086421 2086726 . + 0 ID=cds-UTX06896.1;Parent=gene-NM058_11085;Dbxref=NCBI_GP:UTX06896.1;Name=UTX06896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389858.1;locus_tag=NM058_11085;product=protein CgeC;protein_id=UTX06896.1;transl_table=11 CP101611.1 Genbank pseudogene 2086792 2088071 . + . ID=gene-NM058_11090;Name=NM058_11090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11090;pseudo=true CP101611.1 Protein Homology CDS 2086792 2088071 . + 0 ID=cds-NM058_11090;Parent=gene-NM058_11090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389857.1;locus_tag=NM058_11090;product=glycosyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2088100 2088878 . + . ID=gene-NM058_11095;Name=NM058_11095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11095;pseudo=true CP101611.1 Protein Homology CDS 2088100 2088878 . + 0 ID=cds-NM058_11095;Parent=gene-NM058_11095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389856.1;locus_tag=NM058_11095;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2088958 2089071 . + . ID=gene-NM058_11100;Name=NM058_11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11100 CP101611.1 Protein Homology CDS 2088958 2089071 . + 0 ID=cds-UTX06897.1;Parent=gene-NM058_11100;Dbxref=NCBI_GP:UTX06897.1;Name=UTX06897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003218179.1;locus_tag=NM058_11100;product=YjcZ family sporulation protein;protein_id=UTX06897.1;transl_table=11 CP101611.1 Genbank pseudogene 2089202 2090535 . + . ID=gene-NM058_11105;Name=NM058_11105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11105;pseudo=true CP101611.1 Protein Homology CDS 2089202 2090535 . + 0 ID=cds-NM058_11105;Parent=gene-NM058_11105;Note=frameshifted;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389855.1;locus_tag=NM058_11105;product=aspartate aminotransferase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2090542 2091230 . + . ID=gene-NM058_11110;Name=NM058_11110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11110;pseudo=true CP101611.1 Protein Homology CDS 2090542 2091230 . + 0 ID=cds-NM058_11110;Parent=gene-NM058_11110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389854.1;locus_tag=NM058_11110;product=CoA transferase subunit A;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2091215 2091866 . + . ID=gene-NM058_11115;Name=NM058_11115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11115;pseudo=true CP101611.1 Protein Homology CDS 2091215 2091866 . + 0 ID=cds-NM058_11115;Parent=gene-NM058_11115;Note=frameshifted;Ontology_term=GO:0008410;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389853.1;locus_tag=NM058_11115;product=3-oxoacid CoA-transferase subunit B;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2091874 2093184 . + . ID=gene-NM058_11120;Name=NM058_11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11120 CP101611.1 Protein Homology CDS 2091874 2093184 . + 0 ID=cds-UTX06898.1;Parent=gene-NM058_11120;Dbxref=NCBI_GP:UTX06898.1;Name=UTX06898.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389852.1;locus_tag=NM058_11120;product=peptidase;protein_id=UTX06898.1;transl_table=11 CP101611.1 Genbank gene 2093162 2093989 . + . ID=gene-NM058_11125;Name=ablB;gbkey=Gene;gene=ablB;gene_biotype=protein_coding;locus_tag=NM058_11125 CP101611.1 Protein Homology CDS 2093162 2093989 . + 0 ID=cds-UTX06899.1;Parent=gene-NM058_11125;Dbxref=NCBI_GP:UTX06899.1;Name=UTX06899.1;Ontology_term=GO:0008080;gbkey=CDS;gene=ablB;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389851.1;locus_tag=NM058_11125;product=putative beta-lysine N-acetyltransferase;protein_id=UTX06899.1;transl_table=11 CP101611.1 Genbank pseudogene 2094002 2095415 . + . ID=gene-NM058_11130;Name=ablA;gbkey=Gene;gene=ablA;gene_biotype=pseudogene;locus_tag=NM058_11130;pseudo=true CP101611.1 Protein Homology CDS 2094002 2095415 . + 0 ID=cds-NM058_11130;Parent=gene-NM058_11130;Note=frameshifted;Ontology_term=GO:0046440,GO:0050066,GO:0051539,GO:1904047;gbkey=CDS;gene=ablA;go_function=lysine 2%2C3-aminomutase activity|0050066||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=L-lysine metabolic process|0046440||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389850.1;locus_tag=NM058_11130;product=lysine 2%2C3-aminomutase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2095412 2095690 . + . ID=gene-NM058_11135;Name=NM058_11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11135 CP101611.1 Protein Homology CDS 2095412 2095690 . + 0 ID=cds-UTX06900.1;Parent=gene-NM058_11135;Dbxref=NCBI_GP:UTX06900.1;Name=UTX06900.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097745.1;locus_tag=NM058_11135;product=YokU family protein;protein_id=UTX06900.1;transl_table=11 CP101611.1 Genbank gene 2095777 2096001 . + . ID=gene-NM058_11140;Name=NM058_11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11140 CP101611.1 Protein Homology CDS 2095777 2096001 . + 0 ID=cds-UTX06901.1;Parent=gene-NM058_11140;Dbxref=NCBI_GP:UTX06901.1;Name=UTX06901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389849.1;locus_tag=NM058_11140;product=YozE family protein;protein_id=UTX06901.1;transl_table=11 CP101611.1 Genbank gene 2096152 2096832 . + . ID=gene-NM058_11145;Name=NM058_11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11145 CP101611.1 Protein Homology CDS 2096152 2096832 . + 0 ID=cds-UTX06902.1;Parent=gene-NM058_11145;Dbxref=NCBI_GP:UTX06902.1;Name=UTX06902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389848.1;locus_tag=NM058_11145;product=hypothetical protein;protein_id=UTX06902.1;transl_table=11 CP101611.1 Genbank gene 2096829 2096972 . - . ID=gene-NM058_11150;Name=NM058_11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11150 CP101611.1 Protein Homology CDS 2096829 2096972 . - 0 ID=cds-UTX06903.1;Parent=gene-NM058_11150;Dbxref=NCBI_GP:UTX06903.1;Name=UTX06903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097744.1;locus_tag=NM058_11150;product=hypothetical protein;protein_id=UTX06903.1;transl_table=11 CP101611.1 Genbank gene 2097094 2097270 . + . ID=gene-NM058_11155;Name=NM058_11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11155 CP101611.1 Protein Homology CDS 2097094 2097270 . + 0 ID=cds-UTX06904.1;Parent=gene-NM058_11155;Dbxref=NCBI_GP:UTX06904.1;Name=UTX06904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389847.1;locus_tag=NM058_11155;product=YozD family protein;protein_id=UTX06904.1;transl_table=11 CP101611.1 Genbank gene 2097350 2097961 . + . ID=gene-NM058_11160;Name=NM058_11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11160 CP101611.1 Protein Homology CDS 2097350 2097961 . + 0 ID=cds-UTX07022.1;Parent=gene-NM058_11160;Dbxref=NCBI_GP:UTX07022.1;Name=UTX07022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389846.1;locus_tag=NM058_11160;product=phosphatase PAP2 family protein;protein_id=UTX07022.1;transl_table=11 CP101611.1 Genbank gene 2098022 2098339 . + . ID=gene-NM058_11165;Name=yodL;gbkey=Gene;gene=yodL;gene_biotype=protein_coding;locus_tag=NM058_11165 CP101611.1 Protein Homology CDS 2098022 2098339 . + 0 ID=cds-UTX06905.1;Parent=gene-NM058_11165;Dbxref=NCBI_GP:UTX06905.1;Name=UTX06905.1;gbkey=CDS;gene=yodL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003241586.1;locus_tag=NM058_11165;product=shape determination protein YodL;protein_id=UTX06905.1;transl_table=11 CP101611.1 Genbank gene 2098375 2098500 . - . ID=gene-NM058_11170;Name=NM058_11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11170 CP101611.1 Protein Homology CDS 2098375 2098500 . - 0 ID=cds-UTX06906.1;Parent=gene-NM058_11170;Dbxref=NCBI_GP:UTX06906.1;Name=UTX06906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097743.1;locus_tag=NM058_11170;product=hypothetical protein;protein_id=UTX06906.1;transl_table=11 CP101611.1 Genbank gene 2098702 2099403 . + . ID=gene-NM058_11175;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=NM058_11175 CP101611.1 Protein Homology CDS 2098702 2099403 . + 0 ID=cds-UTX06907.1;Parent=gene-NM058_11175;Dbxref=NCBI_GP:UTX06907.1;Name=UTX06907.1;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389844.1;locus_tag=NM058_11175;product=purine-nucleoside phosphorylase;protein_id=UTX06907.1;transl_table=11 CP101611.1 Genbank gene 2099485 2100306 . + . ID=gene-NM058_11180;Name=ldcB;gbkey=Gene;gene=ldcB;gene_biotype=protein_coding;locus_tag=NM058_11180 CP101611.1 Protein Homology CDS 2099485 2100306 . + 0 ID=cds-UTX06908.1;Parent=gene-NM058_11180;Dbxref=NCBI_GP:UTX06908.1;Name=UTX06908.1;gbkey=CDS;gene=ldcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389843.1;locus_tag=NM058_11180;product=LD-carboxypeptidase LdcB;protein_id=UTX06908.1;transl_table=11 CP101611.1 Genbank gene 2100389 2100640 . - . ID=gene-NM058_11185;Name=NM058_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11185 CP101611.1 Protein Homology CDS 2100389 2100640 . - 0 ID=cds-UTX06909.1;Parent=gene-NM058_11185;Dbxref=NCBI_GP:UTX06909.1;Name=UTX06909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389842.1;locus_tag=NM058_11185;product=hypothetical protein;protein_id=UTX06909.1;transl_table=11 CP101611.1 Genbank pseudogene 2100728 2101427 . - . ID=gene-NM058_11190;Name=NM058_11190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11190;pseudo=true CP101611.1 Protein Homology CDS 2100728 2101427 . - 0 ID=cds-NM058_11190;Parent=gene-NM058_11190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389841.1;locus_tag=NM058_11190;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2101581 2102981 . + . ID=gene-NM058_11195;Name=ctpA;gbkey=Gene;gene=ctpA;gene_biotype=protein_coding;locus_tag=NM058_11195 CP101611.1 Protein Homology CDS 2101581 2102981 . + 0 ID=cds-UTX06910.1;Parent=gene-NM058_11195;Dbxref=NCBI_GP:UTX06910.1;Name=UTX06910.1;gbkey=CDS;gene=ctpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389840.1;locus_tag=NM058_11195;product=carboxy-terminal processing protease CtpA;protein_id=UTX06910.1;transl_table=11 CP101611.1 Genbank gene 2103016 2104506 . - . ID=gene-NM058_11200;Name=NM058_11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11200 CP101611.1 Protein Homology CDS 2103016 2104506 . - 0 ID=cds-UTX06911.1;Parent=gene-NM058_11200;Dbxref=NCBI_GP:UTX06911.1;Name=UTX06911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389839.1;locus_tag=NM058_11200;product=sodium:solute symporter;protein_id=UTX06911.1;transl_table=11 CP101611.1 Genbank gene 2104506 2104706 . - . ID=gene-NM058_11205;Name=NM058_11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11205 CP101611.1 Protein Homology CDS 2104506 2104706 . - 0 ID=cds-UTX06912.1;Parent=gene-NM058_11205;Dbxref=NCBI_GP:UTX06912.1;Name=UTX06912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097742.1;locus_tag=NM058_11205;product=DUF3311 domain-containing protein;protein_id=UTX06912.1;transl_table=11 CP101611.1 Genbank gene 2104890 2105801 . + . ID=gene-NM058_11210;Name=NM058_11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11210 CP101611.1 Protein Homology CDS 2104890 2105801 . + 0 ID=cds-UTX06913.1;Parent=gene-NM058_11210;Dbxref=NCBI_GP:UTX06913.1;Name=UTX06913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389838.1;locus_tag=NM058_11210;product=ring-cleaving dioxygenase;protein_id=UTX06913.1;transl_table=11 CP101611.1 Genbank pseudogene 2105817 2106420 . + . ID=gene-NM058_11215;Name=NM058_11215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11215;pseudo=true CP101611.1 Protein Homology CDS 2105817 2106420 . + 0 ID=cds-NM058_11215;Parent=gene-NM058_11215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389837.1;locus_tag=NM058_11215;product=alpha/beta hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2106463 2107072 . - . ID=gene-NM058_11220;Name=NM058_11220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11220;pseudo=true CP101611.1 Protein Homology CDS 2106463 2107072 . - 0 ID=cds-NM058_11220;Parent=gene-NM058_11220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389836.1;locus_tag=NM058_11220;product=nitroreductase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2107202 2107540 . + . ID=gene-NM058_11225;Name=yodB;gbkey=Gene;gene=yodB;gene_biotype=protein_coding;locus_tag=NM058_11225 CP101611.1 Protein Homology CDS 2107202 2107540 . + 0 ID=cds-UTX06914.1;Parent=gene-NM058_11225;Dbxref=NCBI_GP:UTX06914.1;Name=UTX06914.1;gbkey=CDS;gene=yodB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389835.1;locus_tag=NM058_11225;product=transcriptional regulator YodB;protein_id=UTX06914.1;transl_table=11 CP101611.1 Genbank gene 2107742 2107930 . + . ID=gene-NM058_11230;Name=NM058_11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11230 CP101611.1 Protein Homology CDS 2107742 2107930 . + 0 ID=cds-UTX06915.1;Parent=gene-NM058_11230;Dbxref=NCBI_GP:UTX06915.1;Name=UTX06915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003241609.1;locus_tag=NM058_11230;product=hypothetical protein;protein_id=UTX06915.1;transl_table=11 CP101611.1 Genbank gene 2107990 2108379 . - . ID=gene-NM058_11235;Name=NM058_11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11235 CP101611.1 Protein Homology CDS 2107990 2108379 . - 0 ID=cds-UTX06916.1;Parent=gene-NM058_11235;Dbxref=NCBI_GP:UTX06916.1;Name=UTX06916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389834.1;locus_tag=NM058_11235;product=tautomerase family protein;protein_id=UTX06916.1;transl_table=11 CP101611.1 Genbank pseudogene 2108723 2110055 . + . ID=gene-NM058_11240;Name=NM058_11240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11240;pseudo=true CP101611.1 Protein Homology CDS 2108723 2110055 . + 0 ID=cds-NM058_11240;Parent=gene-NM058_11240;Note=frameshifted;Ontology_term=GO:0015718,GO:0015295,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_function=solute:proton symporter activity|0015295||IEA;go_process=monocarboxylic acid transport|0015718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389833.1;locus_tag=NM058_11240;product=gluconate:H+ symporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2110142 2110378 . + . ID=gene-NM058_11245;Name=NM058_11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11245 CP101611.1 Protein Homology CDS 2110142 2110378 . + 0 ID=cds-UTX06917.1;Parent=gene-NM058_11245;Dbxref=NCBI_GP:UTX06917.1;Name=UTX06917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389832.1;locus_tag=NM058_11245;product=hypothetical protein;protein_id=UTX06917.1;transl_table=11 CP101611.1 Genbank gene 2110411 2110869 . - . ID=gene-NM058_11250;Name=NM058_11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11250 CP101611.1 Protein Homology CDS 2110411 2110869 . - 0 ID=cds-UTX06918.1;Parent=gene-NM058_11250;Dbxref=NCBI_GP:UTX06918.1;Name=UTX06918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054583.1;locus_tag=NM058_11250;product=spore gernimation protein GerT;protein_id=UTX06918.1;transl_table=11 CP101611.1 Genbank pseudogene 2110968 2111862 . + . ID=gene-NM058_11255;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=pseudogene;locus_tag=NM058_11255;pseudo=true CP101611.1 Protein Homology CDS 2110968 2111862 . + 0 ID=cds-NM058_11255;Parent=gene-NM058_11255;Note=frameshifted;Ontology_term=GO:0006810,GO:0005215,GO:0005887;gbkey=CDS;gene=rarD;go_component=integral component of plasma membrane|0005887||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389830.2;locus_tag=NM058_11255;product=EamA family transporter RarD;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2111938 2112216 . + . ID=gene-NM058_11260;Name=NM058_11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11260 CP101611.1 Protein Homology CDS 2111938 2112216 . + 0 ID=cds-UTX06919.1;Parent=gene-NM058_11260;Dbxref=NCBI_GP:UTX06919.1;Name=UTX06919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097741.1;locus_tag=NM058_11260;product=hypothetical protein;protein_id=UTX06919.1;transl_table=11 CP101611.1 Genbank gene 2112213 2112563 . + . ID=gene-NM058_11265;Name=NM058_11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11265 CP101611.1 Protein Homology CDS 2112213 2112563 . + 0 ID=cds-UTX06920.1;Parent=gene-NM058_11265;Dbxref=NCBI_GP:UTX06920.1;Name=UTX06920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389829.1;locus_tag=NM058_11265;product=YojF family protein;protein_id=UTX06920.1;transl_table=11 CP101611.1 Genbank gene 2112582 2113247 . + . ID=gene-NM058_11270;Name=bshB2;gbkey=Gene;gene=bshB2;gene_biotype=protein_coding;locus_tag=NM058_11270 CP101611.1 Protein Homology CDS 2112582 2113247 . + 0 ID=cds-UTX06921.1;Parent=gene-NM058_11270;Dbxref=NCBI_GP:UTX06921.1;Name=UTX06921.1;Ontology_term=GO:0019213;gbkey=CDS;gene=bshB2;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054582.2;locus_tag=NM058_11270;product=bacillithiol biosynthesis deacetylase BshB2;protein_id=UTX06921.1;transl_table=11 CP101611.1 Genbank gene 2113273 2114121 . - . ID=gene-NM058_11275;Name=rsbRC;gbkey=Gene;gene=rsbRC;gene_biotype=protein_coding;locus_tag=NM058_11275 CP101611.1 Protein Homology CDS 2113273 2114121 . - 0 ID=cds-UTX06922.1;Parent=gene-NM058_11275;Dbxref=NCBI_GP:UTX06922.1;Name=UTX06922.1;gbkey=CDS;gene=rsbRC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389827.1;locus_tag=NM058_11275;product=RsbT co-antagonist RsbRC;protein_id=UTX06922.1;transl_table=11 CP101611.1 Genbank pseudogene 2114137 2115494 . - . ID=gene-NM058_11280;Name=NM058_11280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11280;pseudo=true CP101611.1 Protein Homology CDS 2114137 2115494 . - 0 ID=cds-NM058_11280;Parent=gene-NM058_11280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003241628.1;locus_tag=NM058_11280;product=MATE family efflux transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2115770 2116384 . + . ID=gene-NM058_11285;Name=cdaS;gbkey=Gene;gene=cdaS;gene_biotype=protein_coding;locus_tag=NM058_11285 CP101611.1 Protein Homology CDS 2115770 2116384 . + 0 ID=cds-UTX06923.1;Parent=gene-NM058_11285;Dbxref=NCBI_GP:UTX06923.1;Name=UTX06923.1;gbkey=CDS;gene=cdaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003220108.1;locus_tag=NM058_11285;product=cyclic di-AMP synthase CdaS;protein_id=UTX06923.1;transl_table=11 CP101611.1 Genbank gene 2116619 2117836 . + . ID=gene-NM058_11290;Name=NM058_11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11290 CP101611.1 Protein Homology CDS 2116619 2117836 . + 0 ID=cds-UTX06924.1;Parent=gene-NM058_11290;Dbxref=NCBI_GP:UTX06924.1;Name=UTX06924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389824.2;locus_tag=NM058_11290;product=glycosyl transferase family 1;protein_id=UTX06924.1;transl_table=11 CP101611.1 Genbank gene 2118219 2119454 . + . ID=gene-NM058_11295;Name=cwlS;gbkey=Gene;gene=cwlS;gene_biotype=protein_coding;gene_synonym=yojL;locus_tag=NM058_11295 CP101611.1 Protein Homology CDS 2118219 2119454 . + 0 ID=cds-UTX06925.1;Parent=gene-NM058_11295;Dbxref=NCBI_GP:UTX06925.1;Name=UTX06925.1;gbkey=CDS;gene=cwlS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389823.1;locus_tag=NM058_11295;product=D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS;protein_id=UTX06925.1;transl_table=11 CP101611.1 Genbank gene 2119548 2120135 . + . ID=gene-NM058_11300;Name=NM058_11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11300 CP101611.1 Protein Homology CDS 2119548 2120135 . + 0 ID=cds-UTX06926.1;Parent=gene-NM058_11300;Dbxref=NCBI_GP:UTX06926.1;Name=UTX06926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389822.1;locus_tag=NM058_11300;product=superoxide dismutase family protein;protein_id=UTX06926.1;transl_table=11 CP101611.1 Genbank gene 2120223 2121113 . + . ID=gene-NM058_11305;Name=NM058_11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11305 CP101611.1 Protein Homology CDS 2120223 2121113 . + 0 ID=cds-UTX03839.1;Parent=gene-NM058_11305;Dbxref=NCBI_GP:UTX03839.1;Name=UTX03839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258657.1;locus_tag=NM058_11305;product=MoxR family ATPase;protein_id=UTX03839.1;transl_table=11 CP101611.1 Genbank pseudogene 2121124 2123038 . + . ID=gene-NM058_11310;Name=NM058_11310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11310;pseudo=true CP101611.1 Protein Homology CDS 2121124 2123038 . + 0 ID=cds-NM058_11310;Parent=gene-NM058_11310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389820.2;locus_tag=NM058_11310;product=nitric oxide reductase activation protein NorD;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2123267 2126101 . + . ID=gene-NM058_11315;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=NM058_11315 CP101611.1 Protein Homology CDS 2123267 2126101 . + 0 ID=cds-UTX03840.1;Parent=gene-NM058_11315;Dbxref=NCBI_GP:UTX03840.1;Name=UTX03840.1;Ontology_term=GO:0006099,GO:0006554,GO:0006568,GO:0004591,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA,tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389819.3;locus_tag=NM058_11315;product=2-oxoglutarate dehydrogenase E1 component;protein_id=UTX03840.1;transl_table=11 CP101611.1 Genbank pseudogene 2126117 2127369 . + . ID=gene-NM058_11320;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=pseudogene;locus_tag=NM058_11320;pseudo=true CP101611.1 Protein Homology CDS 2126117 2127369 . + 0 ID=cds-NM058_11320;Parent=gene-NM058_11320;Note=frameshifted;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389818.2;locus_tag=NM058_11320;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2127384 2128385 . - . ID=gene-NM058_11325;Name=NM058_11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11325 CP101611.1 Protein Homology CDS 2127384 2128385 . - 0 ID=cds-UTX03841.1;Parent=gene-NM058_11325;Dbxref=NCBI_GP:UTX03841.1;Name=UTX03841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389817.1;locus_tag=NM058_11325;product=bile acid:sodium symporter family protein;protein_id=UTX03841.1;transl_table=11 CP101611.1 Genbank gene 2128616 2129953 . + . ID=gene-NM058_11330;Name=NM058_11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11330 CP101611.1 Protein Homology CDS 2128616 2129953 . + 0 ID=cds-UTX03842.1;Parent=gene-NM058_11330;Dbxref=NCBI_GP:UTX03842.1;Name=UTX03842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389816.1;locus_tag=NM058_11330;product=sodium-dependent transporter;protein_id=UTX03842.1;transl_table=11 CP101611.1 Genbank gene 2129985 2130830 . - . ID=gene-NM058_11335;Name=NM058_11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11335 CP101611.1 Protein Homology CDS 2129985 2130830 . - 0 ID=cds-UTX03843.1;Parent=gene-NM058_11335;Dbxref=NCBI_GP:UTX03843.1;Name=UTX03843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389815.1;locus_tag=NM058_11335;product=superoxide dismutase;protein_id=UTX03843.1;transl_table=11 CP101611.1 Genbank gene 2130820 2132718 . - . ID=gene-NM058_11340;Name=NM058_11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11340 CP101611.1 Protein Homology CDS 2130820 2132718 . - 0 ID=cds-UTX03844.1;Parent=gene-NM058_11340;Dbxref=NCBI_GP:UTX03844.1;Name=UTX03844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389814.2;locus_tag=NM058_11340;product=squalene--hopene cyclase;protein_id=UTX03844.1;transl_table=11 CP101611.1 Genbank gene 2132818 2134305 . - . ID=gene-NM058_11345;Name=dhaS;gbkey=Gene;gene=dhaS;gene_biotype=protein_coding;locus_tag=NM058_11345 CP101611.1 Protein Homology CDS 2132818 2134305 . - 0 ID=cds-UTX03845.1;Parent=gene-NM058_11345;Dbxref=NCBI_GP:UTX03845.1;Name=UTX03845.1;gbkey=CDS;gene=dhaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389813.1;locus_tag=NM058_11345;product=aldehyde dehydrogenase DhaS;protein_id=UTX03845.1;transl_table=11 CP101611.1 Genbank gene 2134535 2134738 . + . ID=gene-NM058_11350;Name=NM058_11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11350 CP101611.1 Protein Homology CDS 2134535 2134738 . + 0 ID=cds-UTX03846.1;Parent=gene-NM058_11350;Dbxref=NCBI_GP:UTX03846.1;Name=UTX03846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389812.1;locus_tag=NM058_11350;product=DUF6501 family protein;protein_id=UTX03846.1;transl_table=11 CP101611.1 Genbank gene 2135065 2135409 . + . ID=gene-NM058_11355;Name=NM058_11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11355 CP101611.1 Protein Homology CDS 2135065 2135409 . + 0 ID=cds-UTX03847.1;Parent=gene-NM058_11355;Dbxref=NCBI_GP:UTX03847.1;Name=UTX03847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389811.1;locus_tag=NM058_11355;product=PH domain-containing protein;protein_id=UTX03847.1;transl_table=11 CP101611.1 Genbank gene 2135639 2136130 . + . ID=gene-NM058_11360;Name=NM058_11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11360 CP101611.1 Protein Homology CDS 2135639 2136130 . + 0 ID=cds-UTX03848.1;Parent=gene-NM058_11360;Dbxref=NCBI_GP:UTX03848.1;Name=UTX03848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389805.2;locus_tag=NM058_11360;product=TraR/DksA family transcriptional regulator;protein_id=UTX03848.1;transl_table=11 CP101611.1 Genbank gene 2136279 2136905 . + . ID=gene-NM058_11365;Name=azoJ;gbkey=Gene;gene=azoJ;gene_biotype=protein_coding;gene_synonym=yocJ;locus_tag=NM058_11365 CP101611.1 Protein Homology CDS 2136279 2136905 . + 0 ID=cds-UTX03849.1;Parent=gene-NM058_11365;Dbxref=NCBI_GP:UTX03849.1;Name=UTX03849.1;gbkey=CDS;gene=azoJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389804.1;locus_tag=NM058_11365;product=FMN-dependent NADH-azoreductase AzoJ;protein_id=UTX03849.1;transl_table=11 CP101611.1 Genbank gene 2137137 2137323 . + . ID=gene-NM058_11370;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=NM058_11370 CP101611.1 cmsearch ncRNA 2137137 2137323 . + . ID=rna-NM058_11370;Parent=gene-NM058_11370;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_11370;product=6S RNA CP101611.1 cmsearch exon 2137137 2137323 . + . ID=exon-NM058_11370-1;Parent=rna-NM058_11370;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_11370;product=6S RNA CP101611.1 Genbank gene 2137465 2139240 . + . ID=gene-NM058_11375;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=NM058_11375 CP101611.1 Protein Homology CDS 2137465 2139240 . + 0 ID=cds-UTX03850.1;Parent=gene-NM058_11375;Dbxref=NCBI_GP:UTX03850.1;Name=UTX03850.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389803.1;locus_tag=NM058_11375;product=DNA helicase RecQ;protein_id=UTX03850.1;transl_table=11 CP101611.1 Genbank gene 2139488 2140351 . + . ID=gene-NM058_11380;Name=NM058_11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11380 CP101611.1 Protein Homology CDS 2139488 2140351 . + 0 ID=cds-UTX03851.1;Parent=gene-NM058_11380;Dbxref=NCBI_GP:UTX03851.1;Name=UTX03851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389802.1;locus_tag=NM058_11380;product=LysM peptidoglycan-binding domain-containing protein;protein_id=UTX03851.1;transl_table=11 CP101611.1 Genbank gene 2141320 2141919 . - . ID=gene-NM058_11385;Name=desR;gbkey=Gene;gene=desR;gene_biotype=protein_coding;locus_tag=NM058_11385 CP101611.1 Protein Homology CDS 2141320 2141919 . - 0 ID=cds-UTX03852.1;Parent=gene-NM058_11385;Dbxref=NCBI_GP:UTX03852.1;Name=UTX03852.1;gbkey=CDS;gene=desR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389801.1;locus_tag=NM058_11385;product=two-component system response regulator DesR;protein_id=UTX03852.1;transl_table=11 CP101611.1 Genbank gene 2141938 2143050 . - . ID=gene-NM058_11390;Name=desK;gbkey=Gene;gene=desK;gene_biotype=protein_coding;locus_tag=NM058_11390 CP101611.1 Protein Homology CDS 2141938 2143050 . - 0 ID=cds-UTX03853.1;Parent=gene-NM058_11390;Dbxref=NCBI_GP:UTX03853.1;Name=UTX03853.1;gbkey=CDS;gene=desK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389800.1;locus_tag=NM058_11390;product=two-component sensor histidine kinase DesK;protein_id=UTX03853.1;transl_table=11 CP101611.1 Genbank gene 2143172 2144230 . - . ID=gene-NM058_11395;Name=desE;gbkey=Gene;gene=desE;gene_biotype=protein_coding;locus_tag=NM058_11395 CP101611.1 Protein Homology CDS 2143172 2144230 . - 0 ID=cds-UTX03854.1;Parent=gene-NM058_11395;Dbxref=NCBI_GP:UTX03854.1;Name=UTX03854.1;gbkey=CDS;gene=desE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389799.1;locus_tag=NM058_11395;product=fatty acid desaturase DesE;protein_id=UTX03854.1;transl_table=11 CP101611.1 Genbank gene 2144395 2145372 . - . ID=gene-NM058_11400;Name=NM058_11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11400 CP101611.1 Protein Homology CDS 2144395 2145372 . - 0 ID=cds-UTX03855.1;Parent=gene-NM058_11400;Dbxref=NCBI_GP:UTX03855.1;Name=UTX03855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389798.1;locus_tag=NM058_11400;product=LD-carboxypeptidase;protein_id=UTX03855.1;transl_table=11 CP101611.1 Genbank gene 2145436 2145933 . - . ID=gene-NM058_11405;Name=NM058_11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11405 CP101611.1 Protein Homology CDS 2145436 2145933 . - 0 ID=cds-UTX03856.1;Parent=gene-NM058_11405;Dbxref=NCBI_GP:UTX03856.1;Name=UTX03856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389797.1;locus_tag=NM058_11405;product=N-acetyltransferase;protein_id=UTX03856.1;transl_table=11 CP101611.1 Genbank pseudogene 2146103 2146884 . + . ID=gene-NM058_11410;Name=NM058_11410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11410;pseudo=true CP101611.1 Protein Homology CDS 2146103 2146884 . + 0 ID=cds-NM058_11410;Parent=gene-NM058_11410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389796.1;locus_tag=NM058_11410;product=VLRF1 family aeRF1-type release factor;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2147022 2147558 . + . ID=gene-NM058_11415;Name=NM058_11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11415 CP101611.1 Protein Homology CDS 2147022 2147558 . + 0 ID=cds-UTX03857.1;Parent=gene-NM058_11415;Dbxref=NCBI_GP:UTX03857.1;Name=UTX03857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389795.1;locus_tag=NM058_11415;product=DUF420 domain-containing protein;protein_id=UTX03857.1;transl_table=11 CP101611.1 Genbank gene 2147651 2148325 . - . ID=gene-NM058_11420;Name=NM058_11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11420 CP101611.1 Protein Homology CDS 2147651 2148325 . - 0 ID=cds-UTX03858.1;Parent=gene-NM058_11420;Dbxref=NCBI_GP:UTX03858.1;Name=UTX03858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389794.1;locus_tag=NM058_11420;product=lysozyme family protein;protein_id=UTX03858.1;transl_table=11 CP101611.1 Genbank gene 2148518 2148841 . + . ID=gene-NM058_11425;Name=czrA;gbkey=Gene;gene=czrA;gene_biotype=protein_coding;locus_tag=NM058_11425 CP101611.1 Protein Homology CDS 2148518 2148841 . + 0 ID=cds-UTX03859.1;Parent=gene-NM058_11425;Dbxref=NCBI_GP:UTX03859.1;Name=UTX03859.1;gbkey=CDS;gene=czrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389793.1;locus_tag=NM058_11425;product=Zn(II)-responsive metalloregulatory transcriptional repressor CzrA;protein_id=UTX03859.1;transl_table=11 CP101611.1 Genbank gene 2148867 2149412 . - . ID=gene-NM058_11430;Name=NM058_11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11430 CP101611.1 Protein Homology CDS 2148867 2149412 . - 0 ID=cds-UTX03860.1;Parent=gene-NM058_11430;Dbxref=NCBI_GP:UTX03860.1;Name=UTX03860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389792.1;locus_tag=NM058_11430;product=kinase;protein_id=UTX03860.1;transl_table=11 CP101611.1 Genbank gene 2149621 2150559 . + . ID=gene-NM058_11435;Name=NM058_11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11435 CP101611.1 Protein Homology CDS 2149621 2150559 . + 0 ID=cds-UTX03861.1;Parent=gene-NM058_11435;Dbxref=NCBI_GP:UTX03861.1;Name=UTX03861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389791.1;locus_tag=NM058_11435;product=YafY family transcriptional regulator;protein_id=UTX03861.1;transl_table=11 CP101611.1 Genbank gene 2150612 2151094 . + . ID=gene-NM058_11440;Name=NM058_11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11440 CP101611.1 Protein Homology CDS 2150612 2151094 . + 0 ID=cds-UTX03862.1;Parent=gene-NM058_11440;Dbxref=NCBI_GP:UTX03862.1;Name=UTX03862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258635.1;locus_tag=NM058_11440;product=GyrI-like domain-containing protein;protein_id=UTX03862.1;transl_table=11 CP101611.1 Genbank gene 2151171 2151872 . + . ID=gene-NM058_11445;Name=NM058_11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11445 CP101611.1 Protein Homology CDS 2151171 2151872 . + 0 ID=cds-UTX03863.1;Parent=gene-NM058_11445;Dbxref=NCBI_GP:UTX03863.1;Name=UTX03863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389789.1;locus_tag=NM058_11445;product=MBL fold metallo-hydrolase;protein_id=UTX03863.1;transl_table=11 CP101611.1 Genbank gene 2151877 2152452 . + . ID=gene-NM058_11450;Name=NM058_11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11450 CP101611.1 Protein Homology CDS 2151877 2152452 . + 0 ID=cds-UTX03864.1;Parent=gene-NM058_11450;Dbxref=NCBI_GP:UTX03864.1;Name=UTX03864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389788.1;locus_tag=NM058_11450;product=TetR/AcrR family transcriptional regulator;protein_id=UTX03864.1;transl_table=11 CP101611.1 Genbank gene 2152530 2153273 . + . ID=gene-NM058_11455;Name=NM058_11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11455 CP101611.1 Protein Homology CDS 2152530 2153273 . + 0 ID=cds-UTX03865.1;Parent=gene-NM058_11455;Dbxref=NCBI_GP:UTX03865.1;Name=UTX03865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389787.1;locus_tag=NM058_11455;product=GNAT family N-acetyltransferase;protein_id=UTX03865.1;transl_table=11 CP101611.1 Genbank gene 2153288 2154013 . + . ID=gene-NM058_11460;Name=NM058_11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11460 CP101611.1 Protein Homology CDS 2153288 2154013 . + 0 ID=cds-UTX07023.1;Parent=gene-NM058_11460;Dbxref=NCBI_GP:UTX07023.1;Name=UTX07023.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389786.1;locus_tag=NM058_11460;product=helix-turn-helix domain-containing protein;protein_id=UTX07023.1;transl_table=11 CP101611.1 Genbank gene 2154078 2154410 . + . ID=gene-NM058_11465;Name=csaA;gbkey=Gene;gene=csaA;gene_biotype=protein_coding;locus_tag=NM058_11465 CP101611.1 Protein Homology CDS 2154078 2154410 . + 0 ID=cds-UTX03866.1;Parent=gene-NM058_11465;Dbxref=NCBI_GP:UTX03866.1;Name=UTX03866.1;gbkey=CDS;gene=csaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389785.1;locus_tag=NM058_11465;product=chaperone CsaA;protein_id=UTX03866.1;transl_table=11 CP101611.1 Genbank gene 2154945 2155202 . + . ID=gene-NM058_11470;Name=NM058_11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11470 CP101611.1 Protein Homology CDS 2154945 2155202 . + 0 ID=cds-UTX03867.1;Parent=gene-NM058_11470;Dbxref=NCBI_GP:UTX03867.1;Name=UTX03867.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01653.1;locus_tag=NM058_11470;product=lactococcin 972 family bacteriocin;protein_id=UTX03867.1;transl_table=11 CP101611.1 Genbank gene 2155493 2157466 . + . ID=gene-NM058_11475;Name=NM058_11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11475 CP101611.1 Protein Homology CDS 2155493 2157466 . + 0 ID=cds-UTX03868.1;Parent=gene-NM058_11475;Dbxref=NCBI_GP:UTX03868.1;Name=UTX03868.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01654.1;locus_tag=NM058_11475;product=DUF1430 domain-containing protein;protein_id=UTX03868.1;transl_table=11 CP101611.1 Genbank gene 2157463 2158083 . + . ID=gene-NM058_11480;Name=NM058_11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11480 CP101611.1 Protein Homology CDS 2157463 2158083 . + 0 ID=cds-UTX03869.1;Parent=gene-NM058_11480;Dbxref=NCBI_GP:UTX03869.1;Name=UTX03869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010328395.1;locus_tag=NM058_11480;product=ABC transporter ATP-binding protein;protein_id=UTX03869.1;transl_table=11 CP101611.1 Genbank gene 2158097 2158306 . + . ID=gene-NM058_11485;Name=NM058_11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11485 CP101611.1 Protein Homology CDS 2158097 2158306 . + 0 ID=cds-UTX03870.1;Parent=gene-NM058_11485;Dbxref=NCBI_GP:UTX03870.1;Name=UTX03870.1;Note=Built to rescue LMOF2365_14255 during structural annotation change regression.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010328394.1;locus_tag=NM058_11485;product=bacteriocin-like WGxF protein;protein_id=UTX03870.1;transl_table=11 CP101611.1 Genbank gene 2158705 2159700 . - . ID=gene-NM058_11490;Name=NM058_11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11490 CP101611.1 Protein Homology CDS 2158705 2159700 . - 0 ID=cds-UTX03871.1;Parent=gene-NM058_11490;Dbxref=NCBI_GP:UTX03871.1;Name=UTX03871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000109450.1;locus_tag=NM058_11490;product=S8 family peptidase;protein_id=UTX03871.1;transl_table=11 CP101611.1 Genbank gene 2159727 2160611 . - . ID=gene-NM058_11495;Name=NM058_11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11495 CP101611.1 Protein Homology CDS 2159727 2160611 . - 0 ID=cds-UTX03872.1;Parent=gene-NM058_11495;Dbxref=NCBI_GP:UTX03872.1;Name=UTX03872.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799177.1;locus_tag=NM058_11495;product=endonuclease;protein_id=UTX03872.1;transl_table=11 CP101611.1 Genbank gene 2160808 2162661 . + . ID=gene-NM058_11500;Name=NM058_11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11500 CP101611.1 Protein Homology CDS 2160808 2162661 . + 0 ID=cds-UTX03873.1;Parent=gene-NM058_11500;Dbxref=NCBI_GP:UTX03873.1;Name=UTX03873.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001211247.1;locus_tag=NM058_11500;product=S8 family serine peptidase;protein_id=UTX03873.1;transl_table=11 CP101611.1 Genbank gene 2162633 2163574 . + . ID=gene-NM058_11505;Name=NM058_11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11505 CP101611.1 Protein Homology CDS 2162633 2163574 . + 0 ID=cds-UTX03874.1;Parent=gene-NM058_11505;Dbxref=NCBI_GP:UTX03874.1;Name=UTX03874.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020966.2;locus_tag=NM058_11505;product=EndoU domain-containing protein;protein_id=UTX03874.1;transl_table=11 CP101611.1 Genbank gene 2163576 2163719 . + . ID=gene-NM058_11510;Name=NM058_11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11510 CP101611.1 GeneMarkS-2+ CDS 2163576 2163719 . + 0 ID=cds-UTX03875.1;Parent=gene-NM058_11510;Dbxref=NCBI_GP:UTX03875.1;Name=UTX03875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_11510;product=hypothetical protein;protein_id=UTX03875.1;transl_table=11 CP101611.1 Genbank pseudogene 2163709 2163960 . + . ID=gene-NM058_11515;Name=NM058_11515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11515;pseudo=true CP101611.1 Protein Homology CDS 2163709 2163960 . + 0 ID=cds-NM058_11515;Parent=gene-NM058_11515;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390042.1;locus_tag=NM058_11515;product=SMI1/KNR4 family protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2164055 2165940 . + . ID=gene-NM058_11520;Name=NM058_11520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11520;pseudo=true CP101611.1 Protein Homology CDS 2164055 2165940 . + 0 ID=cds-NM058_11520;Parent=gene-NM058_11520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014470069.1;locus_tag=NM058_11520;product=T7SS effector LXG polymorphic toxin;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2165953 2166411 . + . ID=gene-NM058_11525;Name=NM058_11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11525 CP101611.1 Protein Homology CDS 2165953 2166411 . + 0 ID=cds-UTX03876.1;Parent=gene-NM058_11525;Dbxref=NCBI_GP:UTX03876.1;Name=UTX03876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014479998.1;locus_tag=NM058_11525;product=SMI1/KNR4 family protein;protein_id=UTX03876.1;transl_table=11 CP101611.1 Genbank pseudogene 2166467 2167065 . + . ID=gene-NM058_11530;Name=NM058_11530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11530;pseudo=true CP101611.1 Protein Homology CDS 2166467 2167065 . + 0 ID=cds-NM058_11530;Parent=gene-NM058_11530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007407917.1;locus_tag=NM058_11530;product=SMI1/KNR4 family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2167503 2167586 . + . ID=gene-NM058_11535;Name=NM058_11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11535 CP101611.1 Protein Homology CDS 2167503 2167586 . + 0 ID=cds-UTX07024.1;Parent=gene-NM058_11535;Dbxref=NCBI_GP:UTX07024.1;Name=UTX07024.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016515.2;locus_tag=NM058_11535;product=antitoxin YezG family protein;protein_id=UTX07024.1;transl_table=11 CP101611.1 Genbank gene 2167687 2168295 . - . ID=gene-NM058_11540;Name=NM058_11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11540 CP101611.1 Protein Homology CDS 2167687 2168295 . - 0 ID=cds-UTX03877.1;Parent=gene-NM058_11540;Dbxref=NCBI_GP:UTX03877.1;Name=UTX03877.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025253.2;locus_tag=NM058_11540;product=tail fiber domain-containing protein;protein_id=UTX03877.1;transl_table=11 CP101611.1 Genbank pseudogene 2168566 2168694 . + . ID=gene-NM058_11545;Name=NM058_11545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11545;pseudo=true CP101611.1 Protein Homology CDS 2168566 2168694 . + 0 ID=cds-NM058_11545;Parent=gene-NM058_11545;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010328386.1;locus_tag=NM058_11545;product=SMI1/KNR4 family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2169350 2169466 . - . ID=gene-NM058_11550;Name=bsrG;gbkey=Gene;gene=bsrG;gene_biotype=protein_coding;locus_tag=NM058_11550 CP101611.1 Protein Homology CDS 2169350 2169466 . - 0 ID=cds-UTX03878.1;Parent=gene-NM058_11550;Dbxref=NCBI_GP:UTX03878.1;Name=UTX03878.1;gbkey=CDS;gene=bsrG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513970.1;locus_tag=NM058_11550;product=type I toxin-antitoxin system toxin BsrG;protein_id=UTX03878.1;transl_table=11 CP101611.1 Genbank gene 2170060 2170308 . + . ID=gene-NM058_11555;Name=NM058_11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11555 CP101611.1 GeneMarkS-2+ CDS 2170060 2170308 . + 0 ID=cds-UTX03879.1;Parent=gene-NM058_11555;Dbxref=NCBI_GP:UTX03879.1;Name=UTX03879.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_11555;product=hypothetical protein;protein_id=UTX03879.1;transl_table=11 CP101611.1 Genbank gene 2170660 2171493 . + . ID=gene-NM058_11560;Name=NM058_11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11560 CP101611.1 GeneMarkS-2+ CDS 2170660 2171493 . + 0 ID=cds-UTX03880.1;Parent=gene-NM058_11560;Dbxref=NCBI_GP:UTX03880.1;Name=UTX03880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_11560;product=hypothetical protein;protein_id=UTX03880.1;transl_table=11 CP101611.1 Genbank gene 2171579 2172079 . + . ID=gene-NM058_11565;Name=NM058_11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11565 CP101611.1 GeneMarkS-2+ CDS 2171579 2172079 . + 0 ID=cds-UTX03881.1;Parent=gene-NM058_11565;Dbxref=NCBI_GP:UTX03881.1;Name=UTX03881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_11565;product=hypothetical protein;protein_id=UTX03881.1;transl_table=11 CP101611.1 Genbank gene 2172012 2172185 . + . ID=gene-NM058_11570;Name=NM058_11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11570 CP101611.1 Protein Homology CDS 2172012 2172185 . + 0 ID=cds-UTX07025.1;Parent=gene-NM058_11570;Dbxref=NCBI_GP:UTX07025.1;Name=UTX07025.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022308.2;locus_tag=NM058_11570;product=DUF2651 family protein;protein_id=UTX07025.1;transl_table=11 CP101611.1 Genbank gene 2172376 2172708 . + . ID=gene-NM058_11575;Name=NM058_11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11575 CP101611.1 Protein Homology CDS 2172376 2172708 . + 0 ID=cds-UTX03882.1;Parent=gene-NM058_11575;Dbxref=NCBI_GP:UTX03882.1;Name=UTX03882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390034.1;locus_tag=NM058_11575;product=YolD-like family protein;protein_id=UTX03882.1;transl_table=11 CP101611.1 Genbank gene 2172701 2173945 . + . ID=gene-NM058_11580;Name=NM058_11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11580 CP101611.1 Protein Homology CDS 2172701 2173945 . + 0 ID=cds-UTX03883.1;Parent=gene-NM058_11580;Dbxref=NCBI_GP:UTX03883.1;Name=UTX03883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390033.2;locus_tag=NM058_11580;product=UV damage repair protein UvrX;protein_id=UTX03883.1;transl_table=11 CP101611.1 Genbank gene 2174047 2174364 . + . ID=gene-NM058_11585;Name=sunI;gbkey=Gene;gene=sunI;gene_biotype=protein_coding;locus_tag=NM058_11585 CP101611.1 Protein Homology CDS 2174047 2174364 . + 0 ID=cds-UTX03884.1;Parent=gene-NM058_11585;Dbxref=NCBI_GP:UTX03884.1;Name=UTX03884.1;gbkey=CDS;gene=sunI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390032.1;locus_tag=NM058_11585;product=sublancin immunity protein SunI;protein_id=UTX03884.1;transl_table=11 CP101611.1 Genbank gene 2174663 2174833 . + . ID=gene-NM058_11590;Name=sunA;gbkey=Gene;gene=sunA;gene_biotype=protein_coding;locus_tag=NM058_11590 CP101611.1 Protein Homology CDS 2174663 2174833 . + 0 ID=cds-UTX03885.1;Parent=gene-NM058_11590;Dbxref=NCBI_GP:UTX03885.1;Name=UTX03885.1;gbkey=CDS;gene=sunA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390031.1;locus_tag=NM058_11590;product=bacteriocin sublancin-168;protein_id=UTX03885.1;transl_table=11 CP101611.1 Genbank pseudogene 2174891 2177010 . + . ID=gene-NM058_11595;Name=sunT;gbkey=Gene;gene=sunT;gene_biotype=pseudogene;locus_tag=NM058_11595;pseudo=true CP101611.1 Protein Homology CDS 2174891 2177010 . + 0 ID=cds-NM058_11595;Parent=gene-NM058_11595;Note=frameshifted;gbkey=CDS;gene=sunT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390030.1;locus_tag=NM058_11595;product=sublancin transporter SunT;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2177007 2177420 . + . ID=gene-NM058_11600;Name=bdbA;gbkey=Gene;gene=bdbA;gene_biotype=protein_coding;locus_tag=NM058_11600 CP101611.1 Protein Homology CDS 2177007 2177420 . + 0 ID=cds-UTX03886.1;Parent=gene-NM058_11600;Dbxref=NCBI_GP:UTX03886.1;Name=UTX03886.1;gbkey=CDS;gene=bdbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390029.1;locus_tag=NM058_11600;product=disulfide bond formation protein BdbA;protein_id=UTX03886.1;transl_table=11 CP101611.1 Genbank gene 2177420 2178688 . + . ID=gene-NM058_11605;Name=NM058_11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11605 CP101611.1 Protein Homology CDS 2177420 2178688 . + 0 ID=cds-UTX03887.1;Parent=gene-NM058_11605;Dbxref=NCBI_GP:UTX03887.1;Name=UTX03887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390028.1;locus_tag=NM058_11605;product=SunS family peptide S-glycosyltransferase;protein_id=UTX03887.1;transl_table=11 CP101611.1 Genbank pseudogene 2178685 2179129 . + . ID=gene-NM058_11610;Name=NM058_11610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11610;pseudo=true CP101611.1 Protein Homology CDS 2178685 2179129 . + 0 ID=cds-NM058_11610;Parent=gene-NM058_11610;Note=frameshifted;Ontology_term=GO:0006457,GO:0015035,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390027.1;locus_tag=NM058_11610;product=disulfide bond formation protein B;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2179185 2179326 . - . ID=gene-NM058_11615;Name=NM058_11615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11615;pseudo=true CP101611.1 Protein Homology CDS 2179185 2179326 . - 0 ID=cds-NM058_11615;Parent=gene-NM058_11615;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390026.1;locus_tag=NM058_11615;product=SPP1 phage holin family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2179385 2179783 . + . ID=gene-NM058_11620;Name=NM058_11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11620 CP101611.1 GeneMarkS-2+ CDS 2179385 2179783 . + 0 ID=cds-UTX03888.1;Parent=gene-NM058_11620;Dbxref=NCBI_GP:UTX03888.1;Name=UTX03888.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_11620;product=hypothetical protein;protein_id=UTX03888.1;transl_table=11 CP101611.1 Genbank gene 2179780 2180001 . + . ID=gene-NM058_11625;Name=NM058_11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11625 CP101611.1 GeneMarkS-2+ CDS 2179780 2180001 . + 0 ID=cds-UTX03889.1;Parent=gene-NM058_11625;Dbxref=NCBI_GP:UTX03889.1;Name=UTX03889.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_11625;product=hypothetical protein;protein_id=UTX03889.1;transl_table=11 CP101611.1 Genbank gene 2180672 2181613 . + . ID=gene-NM058_11630;Name=NM058_11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11630 CP101611.1 Protein Homology CDS 2180672 2181613 . + 0 ID=cds-UTX03890.1;Parent=gene-NM058_11630;Dbxref=NCBI_GP:UTX03890.1;Name=UTX03890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003241766.1;locus_tag=NM058_11630;product=bacteriophage abortive infection AbiH family protein;protein_id=UTX03890.1;transl_table=11 CP101611.1 Genbank gene 2181710 2182093 . + . ID=gene-NM058_11635;Name=NM058_11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11635 CP101611.1 Protein Homology CDS 2181710 2182093 . + 0 ID=cds-UTX03891.1;Parent=gene-NM058_11635;Dbxref=NCBI_GP:UTX03891.1;Name=UTX03891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014664222.1;locus_tag=NM058_11635;product=UPF0715 family protein;protein_id=UTX03891.1;transl_table=11 CP101611.1 Genbank gene 2182320 2182619 . + . ID=gene-NM058_11640;Name=NM058_11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11640 CP101611.1 Protein Homology CDS 2182320 2182619 . + 0 ID=cds-UTX03892.1;Parent=gene-NM058_11640;Dbxref=NCBI_GP:UTX03892.1;Name=UTX03892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017417853.1;locus_tag=NM058_11640;product=hypothetical protein;protein_id=UTX03892.1;transl_table=11 CP101611.1 Genbank gene 2182711 2182938 . + . ID=gene-NM058_11645;Name=NM058_11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11645 CP101611.1 Protein Homology CDS 2182711 2182938 . + 0 ID=cds-UTX03893.1;Parent=gene-NM058_11645;Dbxref=NCBI_GP:UTX03893.1;Name=UTX03893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389978.1;locus_tag=NM058_11645;product=helix-turn-helix transcriptional regulator;protein_id=UTX03893.1;transl_table=11 CP101611.1 Genbank pseudogene 2183132 2183772 . + . ID=gene-NM058_11650;Name=NM058_11650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11650;pseudo=true CP101611.1 Protein Homology CDS 2183132 2183772 . + 0 ID=cds-NM058_11650;Parent=gene-NM058_11650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389635.1;locus_tag=NM058_11650;product=DUF3885 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2183891 2184244 . + . ID=gene-NM058_11655;Name=NM058_11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11655 CP101611.1 Protein Homology CDS 2183891 2184244 . + 0 ID=cds-UTX07026.1;Parent=gene-NM058_11655;Dbxref=NCBI_GP:UTX07026.1;Name=UTX07026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389636.1;locus_tag=NM058_11655;product=hypothetical protein;protein_id=UTX07026.1;transl_table=11 CP101611.1 Genbank gene 2184310 2184561 . + . ID=gene-NM058_11660;Name=NM058_11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11660 CP101611.1 Protein Homology CDS 2184310 2184561 . + 0 ID=cds-UTX07027.1;Parent=gene-NM058_11660;Dbxref=NCBI_GP:UTX07027.1;Name=UTX07027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389637.1;locus_tag=NM058_11660;product=hypothetical protein;protein_id=UTX07027.1;transl_table=11 CP101611.1 Genbank gene 2184659 2185066 . + . ID=gene-NM058_11665;Name=NM058_11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11665 CP101611.1 Protein Homology CDS 2184659 2185066 . + 0 ID=cds-UTX03894.1;Parent=gene-NM058_11665;Dbxref=NCBI_GP:UTX03894.1;Name=UTX03894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010334531.1;locus_tag=NM058_11665;product=UPF0715 family protein;protein_id=UTX03894.1;transl_table=11 CP101611.1 Genbank gene 2185199 2185378 . - . ID=gene-NM058_11670;Name=NM058_11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11670 CP101611.1 Protein Homology CDS 2185199 2185378 . - 0 ID=cds-UTX03895.1;Parent=gene-NM058_11670;Dbxref=NCBI_GP:UTX03895.1;Name=UTX03895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097748.1;locus_tag=NM058_11670;product=hypothetical protein;protein_id=UTX03895.1;transl_table=11 CP101611.1 Genbank gene 2185405 2185623 . + . ID=gene-NM058_11675;Name=NM058_11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11675 CP101611.1 Protein Homology CDS 2185405 2185623 . + 0 ID=cds-UTX07028.1;Parent=gene-NM058_11675;Dbxref=NCBI_GP:UTX07028.1;Name=UTX07028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389974.1;locus_tag=NM058_11675;product=hypothetical protein;protein_id=UTX07028.1;transl_table=11 CP101611.1 Genbank pseudogene 2185627 2185841 . + . ID=gene-NM058_11680;Name=NM058_11680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11680;pseudo=true CP101611.1 Protein Homology CDS 2185627 2185841 . + 0 ID=cds-NM058_11680;Parent=gene-NM058_11680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389973.1;locus_tag=NM058_11680;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2185852 2185983 . + . ID=gene-NM058_11685;Name=NM058_11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11685 CP101611.1 Protein Homology CDS 2185852 2185983 . + 0 ID=cds-UTX03896.1;Parent=gene-NM058_11685;Dbxref=NCBI_GP:UTX03896.1;Name=UTX03896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389972.1;locus_tag=NM058_11685;product=hypothetical protein;protein_id=UTX03896.1;transl_table=11 CP101611.1 Genbank gene 2185968 2186123 . + . ID=gene-NM058_11690;Name=NM058_11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11690 CP101611.1 GeneMarkS-2+ CDS 2185968 2186123 . + 0 ID=cds-UTX03897.1;Parent=gene-NM058_11690;Dbxref=NCBI_GP:UTX03897.1;Name=UTX03897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_11690;product=hypothetical protein;protein_id=UTX03897.1;transl_table=11 CP101611.1 Genbank gene 2186166 2186558 . + . ID=gene-NM058_11695;Name=NM058_11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11695 CP101611.1 GeneMarkS-2+ CDS 2186166 2186558 . + 0 ID=cds-UTX03898.1;Parent=gene-NM058_11695;Dbxref=NCBI_GP:UTX03898.1;Name=UTX03898.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_11695;product=hypothetical protein;protein_id=UTX03898.1;transl_table=11 CP101611.1 Genbank gene 2186877 2187893 . - . ID=gene-NM058_11700;Name=NM058_11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11700 CP101611.1 GeneMarkS-2+ CDS 2186877 2187893 . - 0 ID=cds-UTX03899.1;Parent=gene-NM058_11700;Dbxref=NCBI_GP:UTX03899.1;Name=UTX03899.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_11700;product=hypothetical protein;protein_id=UTX03899.1;transl_table=11 CP101611.1 Genbank gene 2188568 2189308 . + . ID=gene-NM058_11705;Name=NM058_11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11705 CP101611.1 Protein Homology CDS 2188568 2189308 . + 0 ID=cds-UTX03900.1;Parent=gene-NM058_11705;Dbxref=NCBI_GP:UTX03900.1;Name=UTX03900.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024502.2;locus_tag=NM058_11705;product=site-specific integrase;protein_id=UTX03900.1;transl_table=11 CP101611.1 Genbank pseudogene 2190030 2190413 . + . ID=gene-NM058_11710;Name=NM058_11710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11710;pseudo=true CP101611.1 Protein Homology CDS 2190030 2190413 . + 0 ID=cds-NM058_11710;Parent=gene-NM058_11710;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389933.1;locus_tag=NM058_11710;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2190479 2191061 . - . ID=gene-NM058_11715;Name=NM058_11715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11715;pseudo=true CP101611.1 Protein Homology CDS 2190479 2191061 . - 0 ID=cds-NM058_11715;Parent=gene-NM058_11715;Note=catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA%3B frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389932.1;locus_tag=NM058_11715;product=ATP-dependent DNA ligase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2191367 2192008 . + . ID=gene-NM058_11720;Name=xynA;gbkey=Gene;gene=xynA;gene_biotype=protein_coding;locus_tag=NM058_11720 CP101611.1 Protein Homology CDS 2191367 2192008 . + 0 ID=cds-UTX03901.1;Parent=gene-NM058_11720;Dbxref=NCBI_GP:UTX03901.1;Name=UTX03901.1;gbkey=CDS;gene=xynA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389765.1;locus_tag=NM058_11720;product=endo-1%2C4-beta-xylanase XynA;protein_id=UTX03901.1;transl_table=11 CP101611.1 Genbank pseudogene 2192394 2192577 . + . ID=gene-NM058_11725;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=pseudogene;gene_synonym=adhA;locus_tag=NM058_11725;pseudo=true CP101611.1 Protein Homology CDS 2192394 2192577 . + 0 ID=cds-NM058_11725;Parent=gene-NM058_11725;Note=similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs%3B frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007410355.1;locus_tag=NM058_11725;product=alcohol dehydrogenase AdhP;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2192736 2194172 . - . ID=gene-NM058_11730;Name=NM058_11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11730 CP101611.1 Protein Homology CDS 2192736 2194172 . - 0 ID=cds-UTX03902.1;Parent=gene-NM058_11730;Dbxref=NCBI_GP:UTX03902.1;Name=UTX03902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389783.2;locus_tag=NM058_11730;product=flavin monoamine oxidase family protein;protein_id=UTX03902.1;transl_table=11 CP101611.1 Genbank gene 2194316 2194870 . + . ID=gene-NM058_11735;Name=NM058_11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11735 CP101611.1 Protein Homology CDS 2194316 2194870 . + 0 ID=cds-UTX03903.1;Parent=gene-NM058_11735;Dbxref=NCBI_GP:UTX03903.1;Name=UTX03903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390042.1;locus_tag=NM058_11735;product=SMI1/KNR4 family protein;protein_id=UTX03903.1;transl_table=11 CP101611.1 Genbank pseudogene 2194963 2195141 . + . ID=gene-NM058_11740;Name=NM058_11740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11740;pseudo=true CP101611.1 Protein Homology CDS 2194963 2195141 . + 0 ID=cds-NM058_11740;Parent=gene-NM058_11740;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390041.2;locus_tag=NM058_11740;product=T7SS effector LXG polymorphic toxin;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2195188 2195538 . - . ID=gene-NM058_11745;Name=NM058_11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11745 CP101611.1 Protein Homology CDS 2195188 2195538 . - 0 ID=cds-UTX03904.1;Parent=gene-NM058_11745;Dbxref=NCBI_GP:UTX03904.1;Name=UTX03904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012160607.1;locus_tag=NM058_11745;product=DUF2200 domain-containing protein;protein_id=UTX03904.1;transl_table=11 CP101611.1 Genbank pseudogene 2195639 2195965 . + . ID=gene-NM058_11750;Name=NM058_11750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11750;pseudo=true CP101611.1 Protein Homology CDS 2195639 2195965 . + 0 ID=cds-NM058_11750;Parent=gene-NM058_11750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004398595.1;locus_tag=NM058_11750;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2196441 2199053 . + . ID=gene-NM058_11755;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=NM058_11755 CP101611.1 Protein Homology CDS 2196441 2199053 . + 0 ID=cds-UTX03905.1;Parent=gene-NM058_11755;Dbxref=NCBI_GP:UTX03905.1;Name=UTX03905.1;Ontology_term=GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015383837.1;locus_tag=NM058_11755;product=phosphoenolpyruvate synthase;protein_id=UTX03905.1;transl_table=11 CP101611.1 Genbank gene 2199362 2199874 . + . ID=gene-NM058_11760;Name=NM058_11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11760 CP101611.1 Protein Homology CDS 2199362 2199874 . + 0 ID=cds-UTX03906.1;Parent=gene-NM058_11760;Dbxref=NCBI_GP:UTX03906.1;Name=UTX03906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010334533.1;locus_tag=NM058_11760;product=GNAT family N-acetyltransferase;protein_id=UTX03906.1;transl_table=11 CP101611.1 Genbank gene 2201909 2202529 . + . ID=gene-NM058_11765;Name=NM058_11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11765 CP101611.1 Protein Homology CDS 2201909 2202529 . + 0 ID=cds-UTX03907.1;Parent=gene-NM058_11765;Dbxref=NCBI_GP:UTX03907.1;Name=UTX03907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015239922.1;locus_tag=NM058_11765;product=lytic polysaccharide monooxygenase;protein_id=UTX03907.1;transl_table=11 CP101611.1 Genbank pseudogene 2202683 2202955 . + . ID=gene-NM058_11770;Name=NM058_11770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11770;pseudo=true CP101611.1 Protein Homology CDS 2202683 2202955 . + 0 ID=cds-NM058_11770;Parent=gene-NM058_11770;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389632.2;locus_tag=NM058_11770;product=SMI1/KNR4 family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2203009 2203932 . - . ID=gene-NM058_11775;Name=bla;gbkey=Gene;gene=bla;gene_biotype=protein_coding;locus_tag=NM058_11775 CP101611.1 Protein Homology CDS 2203009 2203932 . - 0 ID=cds-UTX07029.1;Parent=gene-NM058_11775;Dbxref=NCBI_GP:UTX07029.1;Name=UTX07029.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;gene=bla;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389761.1;locus_tag=NM058_11775;product=class A beta-lactamase;protein_id=UTX07029.1;transl_table=11 CP101611.1 Genbank gene 2204292 2204924 . + . ID=gene-NM058_11780;Name=NM058_11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11780 CP101611.1 Protein Homology CDS 2204292 2204924 . + 0 ID=cds-UTX03908.1;Parent=gene-NM058_11780;Dbxref=NCBI_GP:UTX03908.1;Name=UTX03908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003325965.1;locus_tag=NM058_11780;product=glutamine amidotransferase;protein_id=UTX03908.1;transl_table=11 CP101611.1 Genbank gene 2205195 2206100 . + . ID=gene-NM058_11785;Name=NM058_11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11785 CP101611.1 Protein Homology CDS 2205195 2206100 . + 0 ID=cds-UTX03909.1;Parent=gene-NM058_11785;Dbxref=NCBI_GP:UTX03909.1;Name=UTX03909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015252031.1;locus_tag=NM058_11785;product=CPBP family intramembrane metalloprotease;protein_id=UTX03909.1;transl_table=11 CP101611.1 Genbank gene 2206430 2206882 . + . ID=gene-NM058_11790;Name=NM058_11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11790 CP101611.1 Protein Homology CDS 2206430 2206882 . + 0 ID=cds-UTX03910.1;Parent=gene-NM058_11790;Dbxref=NCBI_GP:UTX03910.1;Name=UTX03910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010334515.1;locus_tag=NM058_11790;product=hypothetical protein;protein_id=UTX03910.1;transl_table=11 CP101611.1 Genbank gene 2207640 2208518 . - . ID=gene-NM058_11795;Name=NM058_11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11795 CP101611.1 Protein Homology CDS 2207640 2208518 . - 0 ID=cds-UTX03911.1;Parent=gene-NM058_11795;Dbxref=NCBI_GP:UTX03911.1;Name=UTX03911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389758.1;locus_tag=NM058_11795;product=DMT family transporter;protein_id=UTX03911.1;transl_table=11 CP101611.1 Genbank pseudogene 2208620 2209493 . + . ID=gene-NM058_11800;Name=NM058_11800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11800;pseudo=true CP101611.1 Protein Homology CDS 2208620 2209493 . + 0 ID=cds-NM058_11800;Parent=gene-NM058_11800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389757.1;locus_tag=NM058_11800;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2209665 2210438 . - . ID=gene-NM058_11805;Name=NM058_11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11805 CP101611.1 Protein Homology CDS 2209665 2210438 . - 0 ID=cds-UTX03912.1;Parent=gene-NM058_11805;Dbxref=NCBI_GP:UTX03912.1;Name=UTX03912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389756.1;locus_tag=NM058_11805;product=DUF817 domain-containing protein;protein_id=UTX03912.1;transl_table=11 CP101611.1 Genbank pseudogene 2210530 2210786 . - . ID=gene-NM058_11810;Name=NM058_11810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11810;pseudo=true CP101611.1 Protein Homology CDS 2210530 2210786 . - 0 ID=cds-NM058_11810;Parent=gene-NM058_11810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389755.1;locus_tag=NM058_11810;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2210797 2211279 . - . ID=gene-NM058_11815;Name=NM058_11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11815 CP101611.1 Protein Homology CDS 2210797 2211279 . - 0 ID=cds-UTX03913.1;Parent=gene-NM058_11815;Dbxref=NCBI_GP:UTX03913.1;Name=UTX03913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389754.1;locus_tag=NM058_11815;product=DUF2975 domain-containing protein;protein_id=UTX03913.1;transl_table=11 CP101611.1 Genbank pseudogene 2211651 2212561 . + . ID=gene-NM058_11820;Name=NM058_11820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11820;pseudo=true CP101611.1 Protein Homology CDS 2211651 2212561 . + 0 ID=cds-NM058_11820;Parent=gene-NM058_11820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389753.1;locus_tag=NM058_11820;product=VanW family protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2212665 2213158 . + . ID=gene-NM058_11825;Name=NM058_11825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11825;pseudo=true CP101611.1 Protein Homology CDS 2212665 2213158 . + 0 ID=cds-NM058_11825;Parent=gene-NM058_11825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389752.2;locus_tag=NM058_11825;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2213201 2213395 . + . ID=gene-NM058_11830;Name=NM058_11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11830 CP101611.1 Protein Homology CDS 2213201 2213395 . + 0 ID=cds-UTX03914.1;Parent=gene-NM058_11830;Dbxref=NCBI_GP:UTX03914.1;Name=UTX03914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389944.1;locus_tag=NM058_11830;product=hypothetical protein;protein_id=UTX03914.1;transl_table=11 CP101611.1 Genbank gene 2213493 2213855 . - . ID=gene-NM058_11835;Name=NM058_11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11835 CP101611.1 Protein Homology CDS 2213493 2213855 . - 0 ID=cds-UTX03915.1;Parent=gene-NM058_11835;Dbxref=NCBI_GP:UTX03915.1;Name=UTX03915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003241857.1;locus_tag=NM058_11835;product=hypothetical protein;protein_id=UTX03915.1;transl_table=11 CP101611.1 Genbank gene 2214033 2214155 . - . ID=gene-NM058_11840;Name=NM058_11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11840 CP101611.1 Protein Homology CDS 2214033 2214155 . - 0 ID=cds-UTX03916.1;Parent=gene-NM058_11840;Dbxref=NCBI_GP:UTX03916.1;Name=UTX03916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389773.1;locus_tag=NM058_11840;product=PhrK family phosphatase-inhibitory pheromone;protein_id=UTX03916.1;transl_table=11 CP101611.1 Genbank gene 2214152 2215267 . - . ID=gene-NM058_11845;Name=NM058_11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11845 CP101611.1 Protein Homology CDS 2214152 2215267 . - 0 ID=cds-UTX03917.1;Parent=gene-NM058_11845;Dbxref=NCBI_GP:UTX03917.1;Name=UTX03917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389772.1;locus_tag=NM058_11845;product=tetratricopeptide repeat protein;protein_id=UTX03917.1;transl_table=11 CP101611.1 Genbank gene 2215504 2215992 . + . ID=gene-NM058_11850;Name=NM058_11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11850 CP101611.1 Protein Homology CDS 2215504 2215992 . + 0 ID=cds-UTX03918.1;Parent=gene-NM058_11850;Dbxref=NCBI_GP:UTX03918.1;Name=UTX03918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389749.1;locus_tag=NM058_11850;product=YdhH/YoaO family protein;protein_id=UTX03918.1;transl_table=11 CP101611.1 Genbank gene 2216076 2217254 . + . ID=gene-NM058_11855;Name=oxdD;gbkey=Gene;gene=oxdD;gene_biotype=protein_coding;locus_tag=NM058_11855 CP101611.1 Protein Homology CDS 2216076 2217254 . + 0 ID=cds-UTX07030.1;Parent=gene-NM058_11855;Dbxref=NCBI_GP:UTX07030.1;Name=UTX07030.1;gbkey=CDS;gene=oxdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389748.1;locus_tag=NM058_11855;product=oxalate decarboxylase;protein_id=UTX07030.1;transl_table=11 CP101611.1 Genbank gene 2217463 2217765 . + . ID=gene-NM058_11860;Name=NM058_11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11860 CP101611.1 Protein Homology CDS 2217463 2217765 . + 0 ID=cds-UTX03919.1;Parent=gene-NM058_11860;Dbxref=NCBI_GP:UTX03919.1;Name=UTX03919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097734.1;locus_tag=NM058_11860;product=hypothetical protein;protein_id=UTX03919.1;transl_table=11 CP101611.1 Genbank gene 2218153 2218824 . - . ID=gene-NM058_11865;Name=NM058_11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11865 CP101611.1 Protein Homology CDS 2218153 2218824 . - 0 ID=cds-UTX03920.1;Parent=gene-NM058_11865;Dbxref=NCBI_GP:UTX03920.1;Name=UTX03920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014114010.1;locus_tag=NM058_11865;product=SOS response-associated peptidase;protein_id=UTX03920.1;transl_table=11 CP101611.1 Genbank gene 2219066 2219785 . + . ID=gene-NM058_11870;Name=NM058_11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11870 CP101611.1 Protein Homology CDS 2219066 2219785 . + 0 ID=cds-UTX03921.1;Parent=gene-NM058_11870;Dbxref=NCBI_GP:UTX03921.1;Name=UTX03921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019714591.1;locus_tag=NM058_11870;product=NPP1 family protein;protein_id=UTX03921.1;transl_table=11 CP101611.1 Genbank gene 2219980 2220372 . + . ID=gene-NM058_11875;Name=NM058_11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11875 CP101611.1 Protein Homology CDS 2219980 2220372 . + 0 ID=cds-UTX07031.1;Parent=gene-NM058_11875;Dbxref=NCBI_GP:UTX07031.1;Name=UTX07031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003328709.1;locus_tag=NM058_11875;product=hypothetical protein;protein_id=UTX07031.1;transl_table=11 CP101611.1 Genbank pseudogene 2220645 2221246 . + . ID=gene-NM058_11880;Name=NM058_11880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11880;pseudo=true CP101611.1 Protein Homology CDS 2220645 2221246 . + 0 ID=cds-NM058_11880;Parent=gene-NM058_11880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484659.1;locus_tag=NM058_11880;product=SDR family oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2221471 2222508 . - . ID=gene-NM058_11885;Name=NM058_11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11885 CP101611.1 Protein Homology CDS 2221471 2222508 . - 0 ID=cds-UTX07032.1;Parent=gene-NM058_11885;Dbxref=NCBI_GP:UTX07032.1;Name=UTX07032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389746.1;locus_tag=NM058_11885;product=polysaccharide lyase family 1 protein;protein_id=UTX07032.1;transl_table=11 CP101611.1 Genbank gene 2222708 2223358 . + . ID=gene-NM058_11890;Name=NM058_11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11890 CP101611.1 Protein Homology CDS 2222708 2223358 . + 0 ID=cds-UTX03922.1;Parent=gene-NM058_11890;Dbxref=NCBI_GP:UTX03922.1;Name=UTX03922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389745.1;locus_tag=NM058_11890;product=YoaK family protein;protein_id=UTX03922.1;transl_table=11 CP101611.1 Genbank gene 2223631 2224329 . + . ID=gene-NM058_11895;Name=exlX;gbkey=Gene;gene=exlX;gene_biotype=protein_coding;gene_synonym=yoaJ;locus_tag=NM058_11895 CP101611.1 Protein Homology CDS 2223631 2224329 . + 0 ID=cds-UTX03923.1;Parent=gene-NM058_11895;Dbxref=NCBI_GP:UTX03923.1;Name=UTX03923.1;gbkey=CDS;gene=exlX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389744.1;locus_tag=NM058_11895;product=expansin ExlX;protein_id=UTX03923.1;transl_table=11 CP101611.1 Genbank gene 2224381 2225832 . - . ID=gene-NM058_11900;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=NM058_11900 CP101611.1 Protein Homology CDS 2224381 2225832 . - 0 ID=cds-UTX03924.1;Parent=gene-NM058_11900;Dbxref=NCBI_GP:UTX03924.1;Name=UTX03924.1;gbkey=CDS;gene=hpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258590.1;locus_tag=NM058_11900;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=UTX03924.1;transl_table=11 CP101611.1 Genbank gene 2226143 2227828 . + . ID=gene-NM058_11905;Name=NM058_11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11905 CP101611.1 Protein Homology CDS 2226143 2227828 . + 0 ID=cds-UTX03925.1;Parent=gene-NM058_11905;Dbxref=NCBI_GP:UTX03925.1;Name=UTX03925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389742.2;locus_tag=NM058_11905;product=methyl-accepting chemotaxis protein;protein_id=UTX03925.1;transl_table=11 CP101611.1 Genbank gene 2227941 2228234 . - . ID=gene-NM058_11910;Name=NM058_11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11910 CP101611.1 Protein Homology CDS 2227941 2228234 . - 0 ID=cds-UTX03926.1;Parent=gene-NM058_11910;Dbxref=NCBI_GP:UTX03926.1;Name=UTX03926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054581.1;locus_tag=NM058_11910;product=YozQ family protein;protein_id=UTX03926.1;transl_table=11 CP101611.1 Genbank gene 2228292 2228414 . - . ID=gene-NM058_11915;Name=NM058_11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11915 CP101611.1 Protein Homology CDS 2228292 2228414 . - 0 ID=cds-UTX03927.1;Parent=gene-NM058_11915;Dbxref=NCBI_GP:UTX03927.1;Name=UTX03927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513963.1;locus_tag=NM058_11915;product=biofilm-forming protein;protein_id=UTX03927.1;transl_table=11 CP101611.1 Genbank gene 2228741 2229094 . + . ID=gene-NM058_11920;Name=NM058_11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11920 CP101611.1 GeneMarkS-2+ CDS 2228741 2229094 . + 0 ID=cds-UTX03928.1;Parent=gene-NM058_11920;Dbxref=NCBI_GP:UTX03928.1;Name=UTX03928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_11920;product=hypothetical protein;protein_id=UTX03928.1;transl_table=11 CP101611.1 Genbank gene 2229024 2229545 . + . ID=gene-NM058_11925;Name=NM058_11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11925 CP101611.1 Protein Homology CDS 2229024 2229545 . + 0 ID=cds-UTX03929.1;Parent=gene-NM058_11925;Dbxref=NCBI_GP:UTX03929.1;Name=UTX03929.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013429.2;locus_tag=NM058_11925;product=sugar phosphate isomerase/epimerase;protein_id=UTX03929.1;transl_table=11 CP101611.1 Genbank gene 2229753 2230052 . + . ID=gene-NM058_11930;Name=NM058_11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11930 CP101611.1 GeneMarkS-2+ CDS 2229753 2230052 . + 0 ID=cds-UTX03930.1;Parent=gene-NM058_11930;Dbxref=NCBI_GP:UTX03930.1;Name=UTX03930.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_11930;product=hypothetical protein;protein_id=UTX03930.1;transl_table=11 CP101611.1 Genbank gene 2230165 2230458 . - . ID=gene-NM058_11935;Name=NM058_11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11935 CP101611.1 Protein Homology CDS 2230165 2230458 . - 0 ID=cds-UTX03931.1;Parent=gene-NM058_11935;Dbxref=NCBI_GP:UTX03931.1;Name=UTX03931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389740.1;locus_tag=NM058_11935;product=hypothetical protein;protein_id=UTX03931.1;transl_table=11 CP101611.1 Genbank pseudogene 2230567 2232608 . - . ID=gene-NM058_11940;Name=NM058_11940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11940;pseudo=true CP101611.1 Protein Homology CDS 2230567 2232608 . - 0 ID=cds-NM058_11940;Parent=gene-NM058_11940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258586.1;locus_tag=NM058_11940;product=molybdopterin oxidoreductase family protein;pseudo=true;transl_table=11 CP101611.1 cmsearch riboswitch 2232756 2232847 . + . ID=id-CP101611.1:2232756..2232847;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 2232940 2233965 . + . ID=gene-NM058_11945;Name=NM058_11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11945 CP101611.1 Protein Homology CDS 2232940 2233965 . + 0 ID=cds-UTX03932.1;Parent=gene-NM058_11945;Dbxref=NCBI_GP:UTX03932.1;Name=UTX03932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258585.1;locus_tag=NM058_11945;product=2-hydroxyacid dehydrogenase;protein_id=UTX03932.1;transl_table=11 CP101611.1 Genbank pseudogene 2233983 2235445 . + . ID=gene-NM058_11950;Name=NM058_11950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11950;pseudo=true CP101611.1 Protein Homology CDS 2233983 2235445 . + 0 ID=cds-NM058_11950;Parent=gene-NM058_11950;Note=frameshifted;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389737.1;locus_tag=NM058_11950;product=FGGY family carbohydrate kinase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2235540 2236783 . + . ID=gene-NM058_11955;Name=NM058_11955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11955;pseudo=true CP101611.1 Protein Homology CDS 2235540 2236783 . + 0 ID=cds-NM058_11955;Parent=gene-NM058_11955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389736.1;locus_tag=NM058_11955;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2237043 2237576 . - . ID=gene-NM058_11960;Name=NM058_11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11960 CP101611.1 Protein Homology CDS 2237043 2237576 . - 0 ID=cds-UTX03933.1;Parent=gene-NM058_11960;Dbxref=NCBI_GP:UTX03933.1;Name=UTX03933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389735.2;locus_tag=NM058_11960;product=GNAT family N-acetyltransferase;protein_id=UTX03933.1;transl_table=11 CP101611.1 Genbank pseudogene 2237620 2238390 . - . ID=gene-NM058_11965;Name=NM058_11965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11965;pseudo=true CP101611.1 Protein Homology CDS 2237620 2238390 . - 0 ID=cds-NM058_11965;Parent=gene-NM058_11965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389734.1;locus_tag=NM058_11965;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2238459 2238764 . - . ID=gene-NM058_11970;Name=NM058_11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_11970 CP101611.1 Protein Homology CDS 2238459 2238764 . - 0 ID=cds-UTX03934.1;Parent=gene-NM058_11970;Dbxref=NCBI_GP:UTX03934.1;Name=UTX03934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389733.1;locus_tag=NM058_11970;product=DUF948 domain-containing protein;protein_id=UTX03934.1;transl_table=11 CP101611.1 Genbank pseudogene 2238915 2239629 . + . ID=gene-NM058_11975;Name=NM058_11975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_11975;pseudo=true CP101611.1 Protein Homology CDS 2238915 2239629 . + 0 ID=cds-NM058_11975;Parent=gene-NM058_11975;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389732.1;locus_tag=NM058_11975;product=3-ketoacyl-ACP reductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2239928 2240296 . + . ID=gene-NM058_11980;Name=rtp;gbkey=Gene;gene=rtp;gene_biotype=protein_coding;locus_tag=NM058_11980 CP101611.1 Protein Homology CDS 2239928 2240296 . + 0 ID=cds-UTX07033.1;Parent=gene-NM058_11980;Dbxref=NCBI_GP:UTX07033.1;Name=UTX07033.1;gbkey=CDS;gene=rtp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389731.1;locus_tag=NM058_11980;product=replication termination protein;protein_id=UTX07033.1;transl_table=11 CP101611.1 Genbank gene 2240445 2241338 . + . ID=gene-NM058_11985;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=NM058_11985 CP101611.1 Protein Homology CDS 2240445 2241338 . + 0 ID=cds-UTX07034.1;Parent=gene-NM058_11985;Dbxref=NCBI_GP:UTX07034.1;Name=UTX07034.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389730.2;locus_tag=NM058_11985;product=pyrroline-5-carboxylate reductase;protein_id=UTX07034.1;transl_table=11 CP101611.1 Genbank gene 2241335 2242450 . + . ID=gene-NM058_11990;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=NM058_11990 CP101611.1 Protein Homology CDS 2241335 2242450 . + 0 ID=cds-UTX03935.1;Parent=gene-NM058_11990;Dbxref=NCBI_GP:UTX03935.1;Name=UTX03935.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003241920.1;locus_tag=NM058_11990;product=glutamate 5-kinase;protein_id=UTX03935.1;transl_table=11 CP101611.1 Genbank gene 2242505 2243407 . - . ID=gene-NM058_11995;Name=gltC;gbkey=Gene;gene=gltC;gene_biotype=protein_coding;locus_tag=NM058_11995 CP101611.1 Protein Homology CDS 2242505 2243407 . - 0 ID=cds-UTX03936.1;Parent=gene-NM058_11995;Dbxref=NCBI_GP:UTX03936.1;Name=UTX03936.1;gbkey=CDS;gene=gltC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389728.2;locus_tag=NM058_11995;product=glutamate biosynthesis transcriptional regulator GltC;protein_id=UTX03936.1;transl_table=11 CP101611.1 Genbank gene 2243554 2248116 . + . ID=gene-NM058_12000;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=NM058_12000 CP101611.1 Protein Homology CDS 2243554 2248116 . + 0 ID=cds-UTX03937.1;Parent=gene-NM058_12000;Dbxref=NCBI_GP:UTX03937.1;Name=UTX03937.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389727.2;locus_tag=NM058_12000;product=glutamate synthase large subunit;protein_id=UTX03937.1;transl_table=11 CP101611.1 Genbank gene 2248133 2249614 . + . ID=gene-NM058_12005;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=NM058_12005 CP101611.1 Protein Homology CDS 2248133 2249614 . + 0 ID=cds-UTX03938.1;Parent=gene-NM058_12005;Dbxref=NCBI_GP:UTX03938.1;Name=UTX03938.1;Ontology_term=GO:0006537,GO:0045181,GO:0009342;gbkey=CDS;gene=gltD;go_component=glutamate synthase complex (NADPH)|0009342||IEA;go_function=glutamate synthase activity%2C NAD(P)H as acceptor|0045181||IEA;go_process=glutamate biosynthetic process|0006537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389726.2;locus_tag=NM058_12005;product=glutamate synthase small subunit;protein_id=UTX03938.1;transl_table=11 CP101611.1 Genbank pseudogene 2249671 2250658 . - . ID=gene-NM058_12010;Name=NM058_12010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12010;pseudo=true CP101611.1 Protein Homology CDS 2249671 2250658 . - 0 ID=cds-NM058_12010;Parent=gene-NM058_12010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389725.1;locus_tag=NM058_12010;product=zinc-binding dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2250781 2251644 . + . ID=gene-NM058_12015;Name=NM058_12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12015 CP101611.1 Protein Homology CDS 2250781 2251644 . + 0 ID=cds-UTX03939.1;Parent=gene-NM058_12015;Dbxref=NCBI_GP:UTX03939.1;Name=UTX03939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389724.1;locus_tag=NM058_12015;product=LysR family transcriptional regulator;protein_id=UTX03939.1;transl_table=11 CP101611.1 Genbank gene 2251835 2253598 . - . ID=gene-NM058_12020;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=NM058_12020 CP101611.1 Protein Homology CDS 2251835 2253598 . - 0 ID=cds-UTX03940.1;Parent=gene-NM058_12020;Dbxref=NCBI_GP:UTX03940.1;Name=UTX03940.1;Ontology_term=GO:0006750;gbkey=CDS;gene=ggt;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389723.1;locus_tag=NM058_12020;product=gamma-glutamyltransferase;protein_id=UTX03940.1;transl_table=11 CP101611.1 Genbank gene 2253783 2254013 . + . ID=gene-NM058_12025;Name=NM058_12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12025 CP101611.1 Protein Homology CDS 2253783 2254013 . + 0 ID=cds-UTX03941.1;Parent=gene-NM058_12025;Dbxref=NCBI_GP:UTX03941.1;Name=UTX03941.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389722.1;locus_tag=NM058_12025;product=excisionase family DNA-binding protein;protein_id=UTX03941.1;transl_table=11 CP101611.1 Genbank gene 2254330 2254875 . + . ID=gene-NM058_12030;Name=NM058_12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12030 CP101611.1 Protein Homology CDS 2254330 2254875 . + 0 ID=cds-UTX03942.1;Parent=gene-NM058_12030;Dbxref=NCBI_GP:UTX03942.1;Name=UTX03942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389721.2;locus_tag=NM058_12030;product=site-specific integrase;protein_id=UTX03942.1;transl_table=11 CP101611.1 Genbank gene 2254928 2255000 . + . ID=gene-NM058_12035;Name=NM058_12035;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_12035 CP101611.1 tRNAscan-SE tRNA 2254928 2255000 . + . ID=rna-NM058_12035;Parent=gene-NM058_12035;anticodon=(pos:2254961..2254963);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_12035;product=tRNA-Arg CP101611.1 tRNAscan-SE exon 2254928 2255000 . + . ID=exon-NM058_12035-1;Parent=rna-NM058_12035;anticodon=(pos:2254961..2254963);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_12035;product=tRNA-Arg CP101611.1 Genbank gene 2255089 2255634 . - . ID=gene-NM058_12040;Name=iseA;gbkey=Gene;gene=iseA;gene_biotype=protein_coding;locus_tag=NM058_12040 CP101611.1 Protein Homology CDS 2255089 2255634 . - 0 ID=cds-UTX03943.1;Parent=gene-NM058_12040;Dbxref=NCBI_GP:UTX03943.1;Name=UTX03943.1;gbkey=CDS;gene=iseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389720.2;locus_tag=NM058_12040;product=DL-endopeptidase inhibitor IseA;protein_id=UTX03943.1;transl_table=11 CP101611.1 Genbank gene 2255921 2257312 . + . ID=gene-NM058_12045;Name=NM058_12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12045 CP101611.1 Protein Homology CDS 2255921 2257312 . + 0 ID=cds-UTX03944.1;Parent=gene-NM058_12045;Dbxref=NCBI_GP:UTX03944.1;Name=UTX03944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389719.2;locus_tag=NM058_12045;product=MATE family efflux transporter;protein_id=UTX03944.1;transl_table=11 CP101611.1 Genbank gene 2257445 2258422 . + . ID=gene-NM058_12050;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=NM058_12050 CP101611.1 Protein Homology CDS 2257445 2258422 . + 0 ID=cds-UTX03945.1;Parent=gene-NM058_12050;Dbxref=NCBI_GP:UTX03945.1;Name=UTX03945.1;gbkey=CDS;gene=galM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389718.1;locus_tag=NM058_12050;product=aldose 1-epimerase;protein_id=UTX03945.1;transl_table=11 CP101611.1 Genbank pseudogene 2258457 2259934 . + . ID=gene-NM058_12055;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=pseudogene;locus_tag=NM058_12055;pseudo=true CP101611.1 Protein Homology CDS 2258457 2259934 . + 0 ID=cds-NM058_12055;Parent=gene-NM058_12055;Note=frameshifted;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003241941.1;locus_tag=NM058_12055;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2260305 2267990 . + . ID=gene-NM058_12060;Name=NM058_12060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12060;pseudo=true CP101611.1 Protein Homology CDS 2260305 2267990 . + 0 ID=cds-NM058_12060;Parent=gene-NM058_12060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389716.2;locus_tag=NM058_12060;product=amino acid adenylation domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2268015 2275693 . + . ID=gene-NM058_12065;Name=NM058_12065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12065;pseudo=true CP101611.1 Protein Homology CDS 2268015 2275693 . + 0 ID=cds-NM058_12065;Parent=gene-NM058_12065;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389715.1;locus_tag=NM058_12065;product=amino acid adenylation domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2275770 2278759 . + . ID=gene-NM058_12070;Name=NM058_12070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12070;pseudo=true CP101611.1 Protein Homology CDS 2275770 2278759 . + 0 ID=cds-NM058_12070;Parent=gene-NM058_12070;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NM058_12070;product=amino acid adenylation domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2278856 2279473 . + . ID=gene-NM058_12075;Name=NM058_12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12075 CP101611.1 Protein Homology CDS 2278856 2279473 . + 0 ID=cds-UTX07035.1;Parent=gene-NM058_12075;Dbxref=NCBI_GP:UTX07035.1;Name=UTX07035.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NM058_12075;product=condensation domain-containing protein;protein_id=UTX07035.1;transl_table=11 CP101611.1 Genbank gene 2279454 2283380 . + . ID=gene-NM058_12080;Name=NM058_12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12080 CP101611.1 Protein Homology CDS 2279454 2283380 . + 0 ID=cds-UTX03946.1;Parent=gene-NM058_12080;Dbxref=NCBI_GP:UTX03946.1;Name=UTX03946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015251980.1;locus_tag=NM058_12080;product=amino acid adenylation domain-containing protein;protein_id=UTX03946.1;transl_table=11 CP101611.1 Genbank pseudogene 2283405 2294204 . + . ID=gene-NM058_12085;Name=NM058_12085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12085;pseudo=true CP101611.1 Protein Homology CDS 2283405 2294204 . + 0 ID=cds-NM058_12085;Parent=gene-NM058_12085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389713.2;locus_tag=NM058_12085;product=amino acid adenylation domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2294212 2298054 . + . ID=gene-NM058_12090;Name=NM058_12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12090 CP101611.1 Protein Homology CDS 2294212 2298054 . + 0 ID=cds-UTX07036.1;Parent=gene-NM058_12090;Dbxref=NCBI_GP:UTX07036.1;Name=UTX07036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389712.1;locus_tag=NM058_12090;product=amino acid adenylation domain-containing protein;protein_id=UTX07036.1;transl_table=11 CP101611.1 Genbank gene 2298164 2298556 . + . ID=gene-NM058_12095;Name=NM058_12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12095 CP101611.1 Protein Homology CDS 2298164 2298556 . + 0 ID=cds-UTX03947.1;Parent=gene-NM058_12095;Dbxref=NCBI_GP:UTX03947.1;Name=UTX03947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389711.1;locus_tag=NM058_12095;product=DUF1360 domain-containing protein;protein_id=UTX03947.1;transl_table=11 CP101611.1 Genbank gene 2298711 2300243 . + . ID=gene-NM058_12100;Name=NM058_12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12100 CP101611.1 Protein Homology CDS 2298711 2300243 . + 0 ID=cds-UTX03948.1;Parent=gene-NM058_12100;Dbxref=NCBI_GP:UTX03948.1;Name=UTX03948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389710.1;locus_tag=NM058_12100;product=family 10 glycosylhydrolase;protein_id=UTX03948.1;transl_table=11 CP101611.1 Genbank pseudogene 2300360 2300925 . + . ID=gene-NM058_12105;Name=NM058_12105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12105;pseudo=true CP101611.1 Protein Homology CDS 2300360 2300925 . + 0 ID=cds-NM058_12105;Parent=gene-NM058_12105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003238116.1;locus_tag=NM058_12105;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2301042 2301623 . + . ID=gene-NM058_12110;Name=NM058_12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12110 CP101611.1 Protein Homology CDS 2301042 2301623 . + 0 ID=cds-UTX03949.1;Parent=gene-NM058_12110;Dbxref=NCBI_GP:UTX03949.1;Name=UTX03949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258552.1;locus_tag=NM058_12110;product=TetR/AcrR family transcriptional regulator;protein_id=UTX03949.1;transl_table=11 CP101611.1 Genbank gene 2301717 2302037 . + . ID=gene-NM058_12115;Name=NM058_12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12115 CP101611.1 Protein Homology CDS 2301717 2302037 . + 0 ID=cds-UTX07037.1;Parent=gene-NM058_12115;Dbxref=NCBI_GP:UTX07037.1;Name=UTX07037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003231520.1;locus_tag=NM058_12115;product=DUF5367 domain-containing protein;protein_id=UTX07037.1;transl_table=11 CP101611.1 Genbank gene 2302128 2303270 . + . ID=gene-NM058_12120;Name=NM058_12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12120 CP101611.1 Protein Homology CDS 2302128 2303270 . + 0 ID=cds-UTX03950.1;Parent=gene-NM058_12120;Dbxref=NCBI_GP:UTX03950.1;Name=UTX03950.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389708.1;locus_tag=NM058_12120;product=acyl-CoA dehydrogenase family protein;protein_id=UTX03950.1;transl_table=11 CP101611.1 Genbank pseudogene 2303312 2304960 . + . ID=gene-NM058_12125;Name=NM058_12125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12125;pseudo=true CP101611.1 Protein Homology CDS 2303312 2304960 . + 0 ID=cds-NM058_12125;Parent=gene-NM058_12125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389707.1;locus_tag=NM058_12125;product=AMP-binding protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2304970 2306303 . + . ID=gene-NM058_12130;Name=NM058_12130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12130;pseudo=true CP101611.1 Protein Homology CDS 2304970 2306303 . + 0 ID=cds-NM058_12130;Parent=gene-NM058_12130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389706.1;locus_tag=NM058_12130;product=acetyl-CoA carboxylase biotin carboxylase subunit;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2306318 2306539 . + . ID=gene-NM058_12135;Name=NM058_12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12135 CP101611.1 Protein Homology CDS 2306318 2306539 . + 0 ID=cds-UTX03951.1;Parent=gene-NM058_12135;Dbxref=NCBI_GP:UTX03951.1;Name=UTX03951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097733.1;locus_tag=NM058_12135;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=UTX03951.1;transl_table=11 CP101611.1 Genbank gene 2306554 2307453 . + . ID=gene-NM058_12140;Name=ldeG;gbkey=Gene;gene=ldeG;gene_biotype=protein_coding;locus_tag=NM058_12140 CP101611.1 Protein Homology CDS 2306554 2307453 . + 0 ID=cds-UTX03952.1;Parent=gene-NM058_12140;Dbxref=NCBI_GP:UTX03952.1;Name=UTX03952.1;gbkey=CDS;gene=ldeG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389705.1;locus_tag=NM058_12140;product=hydroxymethylglutaryl-CoA lyase;protein_id=UTX03952.1;transl_table=11 CP101611.1 Genbank pseudogene 2307474 2308255 . + . ID=gene-NM058_12145;Name=NM058_12145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12145;pseudo=true CP101611.1 Protein Homology CDS 2307474 2308255 . + 0 ID=cds-NM058_12145;Parent=gene-NM058_12145;Note=frameshifted;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389704.1;locus_tag=NM058_12145;product=enoyl-CoA hydratase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2308266 2309801 . + . ID=gene-NM058_12150;Name=NM058_12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12150 CP101611.1 Protein Homology CDS 2308266 2309801 . + 0 ID=cds-UTX03953.1;Parent=gene-NM058_12150;Dbxref=NCBI_GP:UTX03953.1;Name=UTX03953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389703.2;locus_tag=NM058_12150;product=acyl-CoA carboxylase subunit beta;protein_id=UTX03953.1;transl_table=11 CP101611.1 Genbank gene 2309971 2311170 . + . ID=gene-NM058_12155;Name=nrnB;gbkey=Gene;gene=nrnB;gene_biotype=protein_coding;locus_tag=NM058_12155 CP101611.1 Protein Homology CDS 2309971 2311170 . + 0 ID=cds-UTX03954.1;Parent=gene-NM058_12155;Dbxref=NCBI_GP:UTX03954.1;Name=UTX03954.1;gbkey=CDS;gene=nrnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389702.1;locus_tag=NM058_12155;product=oligoribonuclease NrnB;protein_id=UTX03954.1;transl_table=11 CP101611.1 Genbank gene 2311219 2311815 . - . ID=gene-NM058_12160;Name=NM058_12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12160 CP101611.1 Protein Homology CDS 2311219 2311815 . - 0 ID=cds-UTX03955.1;Parent=gene-NM058_12160;Dbxref=NCBI_GP:UTX03955.1;Name=UTX03955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389701.1;locus_tag=NM058_12160;product=DedA family protein;protein_id=UTX03955.1;transl_table=11 CP101611.1 Genbank pseudogene 2311888 2312780 . - . ID=gene-NM058_12165;Name=galU;gbkey=Gene;gene=galU;gene_biotype=pseudogene;locus_tag=NM058_12165;pseudo=true CP101611.1 Protein Homology CDS 2311888 2312780 . - 0 ID=cds-NM058_12165;Parent=gene-NM058_12165;Note=frameshifted;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389700.1;locus_tag=NM058_12165;product=UTP--glucose-1-phosphate uridylyltransferase GalU;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2312787 2313194 . - . ID=gene-NM058_12170;Name=NM058_12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12170 CP101611.1 Protein Homology CDS 2312787 2313194 . - 0 ID=cds-UTX03956.1;Parent=gene-NM058_12170;Dbxref=NCBI_GP:UTX03956.1;Name=UTX03956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007410127.1;locus_tag=NM058_12170;product=GtrA family protein;protein_id=UTX03956.1;transl_table=11 CP101611.1 Genbank pseudogene 2313442 2313702 . + . ID=gene-NM058_12175;Name=NM058_12175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12175;pseudo=true CP101611.1 Protein Homology CDS 2313442 2313702 . + 0 ID=cds-NM058_12175;Parent=gene-NM058_12175;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013352461.1;locus_tag=NM058_12175;product=6-carboxyhexanoate--CoA ligase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2314559 2315760 . + . ID=gene-NM058_12180;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=pseudogene;locus_tag=NM058_12180;pseudo=true CP101611.1 Protein Homology CDS 2314559 2315760 . + 0 ID=cds-NM058_12180;Parent=gene-NM058_12180;Note=frameshifted;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_179284566.1;locus_tag=NM058_12180;product=ACP S-malonyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2315780 2327724 . + . ID=gene-NM058_12185;Name=NM058_12185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12185;pseudo=true CP101611.1 Protein Homology CDS 2315780 2327724 . + 0 ID=cds-NM058_12185;Parent=gene-NM058_12185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_179284567.1;locus_tag=NM058_12185;product=amino acid adenylation domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2327774 2343868 . + . ID=gene-NM058_12190;Name=NM058_12190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12190;pseudo=true CP101611.1 Protein Homology CDS 2327774 2343868 . + 0 ID=cds-NM058_12190;Parent=gene-NM058_12190;Note=frameshifted;Ontology_term=GO:0008610,GO:0031177;gbkey=CDS;go_function=phosphopantetheine binding|0031177||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_179284568.1;locus_tag=NM058_12190;product=non-ribosomal peptide synthase/polyketide synthase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2343958 2351780 . + . ID=gene-NM058_12195;Name=NM058_12195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12195;pseudo=true CP101611.1 Protein Homology CDS 2343958 2351780 . + 0 ID=cds-NM058_12195;Parent=gene-NM058_12195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_179284569.1;locus_tag=NM058_12195;product=amino acid adenylation domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2351966 2352079 . + . ID=gene-NM058_12200;Name=NM058_12200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12200;pseudo=true CP101611.1 Protein Homology CDS 2351966 2352079 . + 0 ID=cds-NM058_12200;Parent=gene-NM058_12200;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389698.1;locus_tag=NM058_12200;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2352141 2353412 . + . ID=gene-NM058_12205;Name=xynC;gbkey=Gene;gene=xynC;gene_biotype=protein_coding;locus_tag=NM058_12205 CP101611.1 Protein Homology CDS 2352141 2353412 . + 0 ID=cds-UTX03957.1;Parent=gene-NM058_12205;Dbxref=NCBI_GP:UTX03957.1;Name=UTX03957.1;gbkey=CDS;gene=xynC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389697.1;locus_tag=NM058_12205;product=glucuronoarabinoxylan endo-1%2C4-beta-xylanase XynC;protein_id=UTX03957.1;transl_table=11 CP101611.1 Genbank gene 2353720 2353983 . - . ID=gene-NM058_12210;Name=NM058_12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12210 CP101611.1 Protein Homology CDS 2353720 2353983 . - 0 ID=cds-UTX03958.1;Parent=gene-NM058_12210;Dbxref=NCBI_GP:UTX03958.1;Name=UTX03958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389696.1;locus_tag=NM058_12210;product=YnfE family protein;protein_id=UTX03958.1;transl_table=11 CP101611.1 Genbank gene 2354060 2355559 . - . ID=gene-NM058_12215;Name=NM058_12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12215 CP101611.1 Protein Homology CDS 2354060 2355559 . - 0 ID=cds-UTX03959.1;Parent=gene-NM058_12215;Dbxref=NCBI_GP:UTX03959.1;Name=UTX03959.1;Ontology_term=GO:0071704,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014113951.1;locus_tag=NM058_12215;product=cellulase family glycosylhydrolase;protein_id=UTX03959.1;transl_table=11 CP101611.1 Genbank gene 2355882 2357279 . - . ID=gene-NM058_12220;Name=NM058_12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12220 CP101611.1 Protein Homology CDS 2355882 2357279 . - 0 ID=cds-UTX03960.1;Parent=gene-NM058_12220;Dbxref=NCBI_GP:UTX03960.1;Name=UTX03960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389694.1;locus_tag=NM058_12220;product=alanine:cation symporter family protein;protein_id=UTX03960.1;transl_table=11 CP101611.1 Genbank gene 2357779 2358132 . + . ID=gene-NM058_12225;Name=NM058_12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12225 CP101611.1 Protein Homology CDS 2357779 2358132 . + 0 ID=cds-UTX03961.1;Parent=gene-NM058_12225;Dbxref=NCBI_GP:UTX03961.1;Name=UTX03961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014113949.1;locus_tag=NM058_12225;product=hypothetical protein;protein_id=UTX03961.1;transl_table=11 CP101611.1 Genbank pseudogene 2358331 2360748 . - . ID=gene-NM058_12230;Name=parC;gbkey=Gene;gene=parC;gene_biotype=pseudogene;locus_tag=NM058_12230;pseudo=true CP101611.1 Protein Homology CDS 2358331 2360748 . - 0 ID=cds-NM058_12230;Parent=gene-NM058_12230;Note=frameshifted;Ontology_term=GO:0006260,GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389692.2;locus_tag=NM058_12230;product=DNA topoisomerase IV subunit A;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2360752 2362719 . - . ID=gene-NM058_12235;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=NM058_12235 CP101611.1 Protein Homology CDS 2360752 2362719 . - 0 ID=cds-UTX03962.1;Parent=gene-NM058_12235;Dbxref=NCBI_GP:UTX03962.1;Name=UTX03962.1;Ontology_term=GO:0006260,GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389691.2;locus_tag=NM058_12235;product=DNA topoisomerase IV subunit B;protein_id=UTX03962.1;transl_table=11 CP101611.1 Genbank gene 2363113 2363520 . - . ID=gene-NM058_12240;Name=NM058_12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12240 CP101611.1 Protein Homology CDS 2363113 2363520 . - 0 ID=cds-UTX07038.1;Parent=gene-NM058_12240;Dbxref=NCBI_GP:UTX07038.1;Name=UTX07038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389690.1;locus_tag=NM058_12240;product=CoA-binding protein;protein_id=UTX07038.1;transl_table=11 CP101611.1 Genbank gene 2363687 2364268 . + . ID=gene-NM058_12245;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=NM058_12245 CP101611.1 Protein Homology CDS 2363687 2364268 . + 0 ID=cds-UTX03963.1;Parent=gene-NM058_12245;Dbxref=NCBI_GP:UTX03963.1;Name=UTX03963.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389689.1;locus_tag=NM058_12245;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=UTX03963.1;transl_table=11 CP101611.1 Genbank gene 2364348 2364635 . + . ID=gene-NM058_12250;Name=NM058_12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12250 CP101611.1 Protein Homology CDS 2364348 2364635 . + 0 ID=cds-UTX03964.1;Parent=gene-NM058_12250;Dbxref=NCBI_GP:UTX03964.1;Name=UTX03964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389688.1;locus_tag=NM058_12250;product=HesB/YadR/YfhF family protein;protein_id=UTX03964.1;transl_table=11 CP101611.1 Genbank gene 2364666 2364965 . - . ID=gene-NM058_12255;Name=NM058_12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12255 CP101611.1 Protein Homology CDS 2364666 2364965 . - 0 ID=cds-UTX03965.1;Parent=gene-NM058_12255;Dbxref=NCBI_GP:UTX03965.1;Name=UTX03965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389687.1;locus_tag=NM058_12255;product=hypothetical protein;protein_id=UTX03965.1;transl_table=11 CP101611.1 Genbank gene 2364981 2365397 . - . ID=gene-NM058_12260;Name=NM058_12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12260 CP101611.1 Protein Homology CDS 2364981 2365397 . - 0 ID=cds-UTX03966.1;Parent=gene-NM058_12260;Dbxref=NCBI_GP:UTX03966.1;Name=UTX03966.1;Ontology_term=GO:0047617;gbkey=CDS;go_function=acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015383772.1;locus_tag=NM058_12260;product=YbgC/FadM family acyl-CoA thioesterase;protein_id=UTX03966.1;transl_table=11 CP101611.1 Genbank gene 2365481 2365735 . - . ID=gene-NM058_12265;Name=tlp;gbkey=Gene;gene=tlp;gene_biotype=protein_coding;locus_tag=NM058_12265 CP101611.1 Protein Homology CDS 2365481 2365735 . - 0 ID=cds-UTX03967.1;Parent=gene-NM058_12265;Dbxref=NCBI_GP:UTX03967.1;Name=UTX03967.1;gbkey=CDS;gene=tlp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389685.1;locus_tag=NM058_12265;product=small acid-soluble spore protein Tlp;protein_id=UTX03967.1;transl_table=11 CP101611.1 Genbank pseudogene 2365772 2365916 . - . ID=gene-NM058_12270;Name=sspN;gbkey=Gene;gene=sspN;gene_biotype=pseudogene;locus_tag=NM058_12270;pseudo=true CP101611.1 Protein Homology CDS 2365772 2365916 . - 0 ID=cds-NM058_12270;Parent=gene-NM058_12270;Note=frameshifted;gbkey=CDS;gene=sspN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054579.2;locus_tag=NM058_12270;product=acid-soluble spore protein SspN;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2365981 2366106 . - . ID=gene-NM058_12275;Name=NM058_12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12275 CP101611.1 Protein Homology CDS 2365981 2366106 . - 0 ID=cds-UTX03968.1;Parent=gene-NM058_12275;Dbxref=NCBI_GP:UTX03968.1;Name=UTX03968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097732.1;locus_tag=NM058_12275;product=FbpB family small basic protein;protein_id=UTX03968.1;transl_table=11 CP101611.1 Genbank gene 2366186 2366698 . - . ID=gene-NM058_12280;Name=NM058_12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12280 CP101611.1 Protein Homology CDS 2366186 2366698 . - 0 ID=cds-UTX03969.1;Parent=gene-NM058_12280;Dbxref=NCBI_GP:UTX03969.1;Name=UTX03969.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389684.1;locus_tag=NM058_12280;product=redoxin domain-containing protein;protein_id=UTX03969.1;transl_table=11 CP101611.1 Genbank gene 2366770 2369499 . - . ID=gene-NM058_12285;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=NM058_12285 CP101611.1 Protein Homology CDS 2366770 2369499 . - 0 ID=cds-UTX03970.1;Parent=gene-NM058_12285;Dbxref=NCBI_GP:UTX03970.1;Name=UTX03970.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389683.1;locus_tag=NM058_12285;product=aconitate hydratase AcnA;protein_id=UTX03970.1;transl_table=11 CP101611.1 Genbank gene 2369726 2369872 . + . ID=gene-NM058_12290;Name=sspO;gbkey=Gene;gene=sspO;gene_biotype=protein_coding;locus_tag=NM058_12290 CP101611.1 Protein Homology CDS 2369726 2369872 . + 0 ID=cds-UTX07039.1;Parent=gene-NM058_12290;Dbxref=NCBI_GP:UTX07039.1;Name=UTX07039.1;gbkey=CDS;gene=sspO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389682.1;locus_tag=NM058_12290;product=acid-soluble spore protein SspO;protein_id=UTX07039.1;transl_table=11 CP101611.1 Genbank gene 2369903 2370049 . + . ID=gene-NM058_12295;Name=NM058_12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12295 CP101611.1 Protein Homology CDS 2369903 2370049 . + 0 ID=cds-UTX03971.1;Parent=gene-NM058_12295;Dbxref=NCBI_GP:UTX03971.1;Name=UTX03971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389681.1;locus_tag=NM058_12295;product=small acid-soluble spore protein P;protein_id=UTX03971.1;transl_table=11 CP101611.1 Genbank gene 2370129 2370521 . + . ID=gene-NM058_12300;Name=NM058_12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12300 CP101611.1 Protein Homology CDS 2370129 2370521 . + 0 ID=cds-UTX03972.1;Parent=gene-NM058_12300;Dbxref=NCBI_GP:UTX03972.1;Name=UTX03972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389680.1;locus_tag=NM058_12300;product=Hsp20/alpha crystallin family protein;protein_id=UTX03972.1;transl_table=11 CP101611.1 Genbank gene 2370753 2371181 . + . ID=gene-NM058_12305;Name=yneK;gbkey=Gene;gene=yneK;gene_biotype=protein_coding;locus_tag=NM058_12305 CP101611.1 Protein Homology CDS 2370753 2371181 . + 0 ID=cds-UTX03973.1;Parent=gene-NM058_12305;Dbxref=NCBI_GP:UTX03973.1;Name=UTX03973.1;gbkey=CDS;gene=yneK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389679.1;locus_tag=NM058_12305;product=DynA interaction protein YneK;protein_id=UTX03973.1;transl_table=11 CP101611.1 Genbank gene 2371212 2371703 . - . ID=gene-NM058_12310;Name=NM058_12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12310 CP101611.1 Protein Homology CDS 2371212 2371703 . - 0 ID=cds-UTX03974.1;Parent=gene-NM058_12310;Dbxref=NCBI_GP:UTX03974.1;Name=UTX03974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389678.1;locus_tag=NM058_12310;product=CcdC family protein;protein_id=UTX03974.1;transl_table=11 CP101611.1 Genbank pseudogene 2371782 2372143 . - . ID=gene-NM058_12315;Name=NM058_12315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12315;pseudo=true CP101611.1 Protein Homology CDS 2371782 2372143 . - 0 ID=cds-NM058_12315;Parent=gene-NM058_12315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389677.1;locus_tag=NM058_12315;product=response regulator;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2372232 2372939 . - . ID=gene-NM058_12320;Name=ccdA;gbkey=Gene;gene=ccdA;gene_biotype=protein_coding;locus_tag=NM058_12320 CP101611.1 Protein Homology CDS 2372232 2372939 . - 0 ID=cds-UTX03975.1;Parent=gene-NM058_12320;Dbxref=NCBI_GP:UTX03975.1;Name=UTX03975.1;gbkey=CDS;gene=ccdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389676.1;locus_tag=NM058_12320;product=cytochrome c-type biogenesis protein CcdA;protein_id=UTX03975.1;transl_table=11 CP101611.1 Genbank pseudogene 2373159 2373331 . + . ID=gene-NM058_12325;Name=NM058_12325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12325;pseudo=true CP101611.1 Protein Homology CDS 2373159 2373331 . + 0 ID=cds-NM058_12325;Parent=gene-NM058_12325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389675.1;locus_tag=NM058_12325;product=aspartyl-phosphate phosphatase Spo0E family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2373405 2373623 . - . ID=gene-NM058_12330;Name=NM058_12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12330 CP101611.1 Protein Homology CDS 2373405 2373623 . - 0 ID=cds-UTX03976.1;Parent=gene-NM058_12330;Dbxref=NCBI_GP:UTX03976.1;Name=UTX03976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389674.1;locus_tag=NM058_12330;product=YneF family protein;protein_id=UTX03976.1;transl_table=11 CP101611.1 Genbank gene 2373709 2374155 . - . ID=gene-NM058_12335;Name=sirA;gbkey=Gene;gene=sirA;gene_biotype=protein_coding;locus_tag=NM058_12335 CP101611.1 Protein Homology CDS 2373709 2374155 . - 0 ID=cds-UTX03977.1;Parent=gene-NM058_12335;Dbxref=NCBI_GP:UTX03977.1;Name=UTX03977.1;gbkey=CDS;gene=sirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389673.1;locus_tag=NM058_12335;product=sporulation inhibitor of replication protein SirA;protein_id=UTX03977.1;transl_table=11 CP101611.1 Genbank gene 2374308 2376311 . - . ID=gene-NM058_12340;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=NM058_12340 CP101611.1 Protein Homology CDS 2374308 2376311 . - 0 ID=cds-UTX03978.1;Parent=gene-NM058_12340;Dbxref=NCBI_GP:UTX03978.1;Name=UTX03978.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389672.1;locus_tag=NM058_12340;product=transketolase;protein_id=UTX03978.1;transl_table=11 CP101611.1 Genbank gene 2376480 2376713 . - . ID=gene-NM058_12345;Name=NM058_12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12345 CP101611.1 Protein Homology CDS 2376480 2376713 . - 0 ID=cds-UTX03979.1;Parent=gene-NM058_12345;Dbxref=NCBI_GP:UTX03979.1;Name=UTX03979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389671.1;locus_tag=NM058_12345;product=DUF896 domain-containing protein;protein_id=UTX03979.1;transl_table=11 CP101611.1 Genbank gene 2376777 2377430 . - . ID=gene-NM058_12350;Name=NM058_12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12350 CP101611.1 Protein Homology CDS 2376777 2377430 . - 0 ID=cds-UTX03980.1;Parent=gene-NM058_12350;Dbxref=NCBI_GP:UTX03980.1;Name=UTX03980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389670.1;locus_tag=NM058_12350;product=recombinase family protein;protein_id=UTX03980.1;transl_table=11 CP101611.1 Genbank gene 2377449 2377766 . - . ID=gene-NM058_12355;Name=yneA;gbkey=Gene;gene=yneA;gene_biotype=protein_coding;locus_tag=NM058_12355 CP101611.1 Protein Homology CDS 2377449 2377766 . - 0 ID=cds-UTX03981.1;Parent=gene-NM058_12355;Dbxref=NCBI_GP:UTX03981.1;Name=UTX03981.1;gbkey=CDS;gene=yneA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389669.1;locus_tag=NM058_12355;product=cell division suppressor protein YneA;protein_id=UTX03981.1;transl_table=11 CP101611.1 Genbank gene 2377916 2378533 . + . ID=gene-NM058_12360;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=NM058_12360 CP101611.1 Protein Homology CDS 2377916 2378533 . + 0 ID=cds-UTX03982.1;Parent=gene-NM058_12360;Dbxref=NCBI_GP:UTX03982.1;Name=UTX03982.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389668.1;locus_tag=NM058_12360;product=transcriptional repressor LexA;protein_id=UTX03982.1;transl_table=11 CP101611.1 Genbank gene 2378921 2379349 . - . ID=gene-NM058_12365;Name=NM058_12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12365 CP101611.1 Protein Homology CDS 2378921 2379349 . - 0 ID=cds-UTX03983.1;Parent=gene-NM058_12365;Dbxref=NCBI_GP:UTX03983.1;Name=UTX03983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258522.1;locus_tag=NM058_12365;product=hypothetical protein;protein_id=UTX03983.1;transl_table=11 CP101611.1 Genbank gene 2379426 2379848 . - . ID=gene-NM058_12370;Name=fosM;gbkey=Gene;gene=fosM;gene_biotype=protein_coding;locus_tag=NM058_12370 CP101611.1 Protein Homology CDS 2379426 2379848 . - 0 ID=cds-UTX03984.1;Parent=gene-NM058_12370;Dbxref=NCBI_GP:UTX03984.1;Name=UTX03984.1;gbkey=CDS;gene=fosM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019714518.1;locus_tag=NM058_12370;product=FosM family fosfomycin resistance protein;protein_id=UTX03984.1;transl_table=11 CP101611.1 Genbank pseudogene 2380026 2380477 . + . ID=gene-NM058_12375;Name=NM058_12375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12375;pseudo=true CP101611.1 Protein Homology CDS 2380026 2380477 . + 0 ID=cds-NM058_12375;Parent=gene-NM058_12375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014664120.1;locus_tag=NM058_12375;product=YndM family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2380504 2381262 . - . ID=gene-NM058_12380;Name=NM058_12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12380 CP101611.1 Protein Homology CDS 2380504 2381262 . - 0 ID=cds-UTX03985.1;Parent=gene-NM058_12380;Dbxref=NCBI_GP:UTX03985.1;Name=UTX03985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389665.1;locus_tag=NM058_12380;product=poly-gamma-glutamate hydrolase family protein;protein_id=UTX03985.1;transl_table=11 CP101611.1 Genbank gene 2381493 2381807 . - . ID=gene-NM058_12385;Name=NM058_12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12385 CP101611.1 Protein Homology CDS 2381493 2381807 . - 0 ID=cds-UTX03986.1;Parent=gene-NM058_12385;Dbxref=NCBI_GP:UTX03986.1;Name=UTX03986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003245621.1;locus_tag=NM058_12385;product=hypothetical protein;protein_id=UTX03986.1;transl_table=11 CP101611.1 Genbank gene 2381898 2383541 . - . ID=gene-NM058_12390;Name=NM058_12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12390 CP101611.1 Protein Homology CDS 2381898 2383541 . - 0 ID=cds-UTX07040.1;Parent=gene-NM058_12390;Dbxref=NCBI_GP:UTX07040.1;Name=UTX07040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258518.1;locus_tag=NM058_12390;product=YndJ family protein;protein_id=UTX07040.1;transl_table=11 CP101611.1 Genbank pseudogene 2383545 2384153 . - . ID=gene-NM058_12395;Name=NM058_12395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12395;pseudo=true CP101611.1 Protein Homology CDS 2383545 2384153 . - 0 ID=cds-NM058_12395;Parent=gene-NM058_12395;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389662.1;locus_tag=NM058_12395;product=DUF4166 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2384158 2384964 . - . ID=gene-NM058_12400;Name=NM058_12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12400 CP101611.1 Protein Homology CDS 2384158 2384964 . - 0 ID=cds-UTX03987.1;Parent=gene-NM058_12400;Dbxref=NCBI_GP:UTX03987.1;Name=UTX03987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389661.1;locus_tag=NM058_12400;product=hypothetical protein;protein_id=UTX03987.1;transl_table=11 CP101611.1 Genbank pseudogene 2385120 2386334 . - . ID=gene-NM058_12405;Name=NM058_12405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12405;pseudo=true CP101611.1 Protein Homology CDS 2385120 2386334 . - 0 ID=cds-NM058_12405;Parent=gene-NM058_12405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003238219.1;locus_tag=NM058_12405;product=Ger(x)C family spore germination protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2386324 2387415 . - . ID=gene-NM058_12410;Name=NM058_12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12410 CP101611.1 Protein Homology CDS 2386324 2387415 . - 0 ID=cds-UTX03988.1;Parent=gene-NM058_12410;Dbxref=NCBI_GP:UTX03988.1;Name=UTX03988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389659.1;locus_tag=NM058_12410;product=spore germination protein;protein_id=UTX03988.1;transl_table=11 CP101611.1 Genbank gene 2387445 2389007 . - . ID=gene-NM058_12415;Name=NM058_12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12415 CP101611.1 Protein Homology CDS 2387445 2389007 . - 0 ID=cds-UTX07041.1;Parent=gene-NM058_12415;Dbxref=NCBI_GP:UTX07041.1;Name=UTX07041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389658.1;locus_tag=NM058_12415;product=spore germination protein;protein_id=UTX07041.1;transl_table=11 CP101611.1 Genbank gene 2389249 2390016 . - . ID=gene-NM058_12420;Name=chrA;gbkey=Gene;gene=chrA;gene_biotype=protein_coding;locus_tag=NM058_12420 CP101611.1 Protein Homology CDS 2389249 2390016 . - 0 ID=cds-UTX07042.1;Parent=gene-NM058_12420;Dbxref=NCBI_GP:UTX07042.1;Name=UTX07042.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;gene=chrA;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006835458.1;locus_tag=NM058_12420;product=chromate efflux transporter;protein_id=UTX07042.1;transl_table=11 CP101611.1 Genbank gene 2390228 2390416 . - . ID=gene-NM058_12425;Name=NM058_12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12425 CP101611.1 Protein Homology CDS 2390228 2390416 . - 0 ID=cds-UTX03989.1;Parent=gene-NM058_12425;Dbxref=NCBI_GP:UTX03989.1;Name=UTX03989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389657.2;locus_tag=NM058_12425;product=hypothetical protein;protein_id=UTX03989.1;transl_table=11 CP101611.1 Genbank gene 2390744 2391178 . + . ID=gene-NM058_12430;Name=NM058_12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12430 CP101611.1 Protein Homology CDS 2390744 2391178 . + 0 ID=cds-UTX03990.1;Parent=gene-NM058_12430;Dbxref=NCBI_GP:UTX03990.1;Name=UTX03990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389656.1;locus_tag=NM058_12430;product=SRPBCC domain-containing protein;protein_id=UTX03990.1;transl_table=11 CP101611.1 Genbank gene 2391224 2391622 . - . ID=gene-NM058_12435;Name=NM058_12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12435 CP101611.1 Protein Homology CDS 2391224 2391622 . - 0 ID=cds-UTX07043.1;Parent=gene-NM058_12435;Dbxref=NCBI_GP:UTX07043.1;Name=UTX07043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389655.1;locus_tag=NM058_12435;product=hypothetical protein;protein_id=UTX07043.1;transl_table=11 CP101611.1 Genbank gene 2391938 2392126 . + . ID=gene-NM058_12440;Name=tatAC;gbkey=Gene;gene=tatAC;gene_biotype=protein_coding;locus_tag=NM058_12440 CP101611.1 Protein Homology CDS 2391938 2392126 . + 0 ID=cds-UTX03991.1;Parent=gene-NM058_12440;Dbxref=NCBI_GP:UTX03991.1;Name=UTX03991.1;gbkey=CDS;gene=tatAC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389654.1;locus_tag=NM058_12440;product=twin-arginine translocase TatAC;protein_id=UTX03991.1;transl_table=11 CP101611.1 Genbank gene 2392304 2392528 . + . ID=gene-NM058_12445;Name=NM058_12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12445 CP101611.1 Protein Homology CDS 2392304 2392528 . + 0 ID=cds-UTX03992.1;Parent=gene-NM058_12445;Dbxref=NCBI_GP:UTX03992.1;Name=UTX03992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389653.2;locus_tag=NM058_12445;product=hypothetical protein;protein_id=UTX03992.1;transl_table=11 CP101611.1 Genbank gene 2392785 2393156 . + . ID=gene-NM058_12450;Name=NM058_12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12450 CP101611.1 Protein Homology CDS 2392785 2393156 . + 0 ID=cds-UTX03993.1;Parent=gene-NM058_12450;Dbxref=NCBI_GP:UTX03993.1;Name=UTX03993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003238230.1;locus_tag=NM058_12450;product=YoqO family protein;protein_id=UTX03993.1;transl_table=11 CP101611.1 Genbank gene 2393291 2394013 . + . ID=gene-NM058_12455;Name=NM058_12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12455 CP101611.1 Protein Homology CDS 2393291 2394013 . + 0 ID=cds-UTX03994.1;Parent=gene-NM058_12455;Dbxref=NCBI_GP:UTX03994.1;Name=UTX03994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389652.2;locus_tag=NM058_12455;product=hypothetical protein;protein_id=UTX03994.1;transl_table=11 CP101611.1 Genbank pseudogene 2394418 2394630 . + . ID=gene-NM058_12460;Name=NM058_12460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12460;pseudo=true CP101611.1 Protein Homology CDS 2394418 2394630 . + 0 ID=cds-NM058_12460;Parent=gene-NM058_12460;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513958.1;locus_tag=NM058_12460;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2394661 2395236 . - . ID=gene-NM058_12465;Name=NM058_12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12465 CP101611.1 GeneMarkS-2+ CDS 2394661 2395236 . - 0 ID=cds-UTX03995.1;Parent=gene-NM058_12465;Dbxref=NCBI_GP:UTX03995.1;Name=UTX03995.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_12465;product=hypothetical protein;protein_id=UTX03995.1;transl_table=11 CP101611.1 Genbank gene 2396076 2396915 . - . ID=gene-NM058_12470;Name=NM058_12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12470 CP101611.1 Protein Homology CDS 2396076 2396915 . - 0 ID=cds-UTX03996.1;Parent=gene-NM058_12470;Dbxref=NCBI_GP:UTX03996.1;Name=UTX03996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389651.1;locus_tag=NM058_12470;product=thymidylate synthase;protein_id=UTX03996.1;transl_table=11 CP101611.1 Genbank gene 2397734 2398015 . + . ID=gene-NM058_12475;Name=NM058_12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12475 CP101611.1 Protein Homology CDS 2397734 2398015 . + 0 ID=cds-UTX03997.1;Parent=gene-NM058_12475;Dbxref=NCBI_GP:UTX03997.1;Name=UTX03997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389650.1;locus_tag=NM058_12475;product=hypothetical protein;protein_id=UTX03997.1;transl_table=11 CP101611.1 Genbank gene 2398193 2398474 . + . ID=gene-NM058_12480;Name=NM058_12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12480 CP101611.1 Protein Homology CDS 2398193 2398474 . + 0 ID=cds-UTX03998.1;Parent=gene-NM058_12480;Dbxref=NCBI_GP:UTX03998.1;Name=UTX03998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389650.1;locus_tag=NM058_12480;product=hypothetical protein;protein_id=UTX03998.1;transl_table=11 CP101611.1 Genbank gene 2398870 2399307 . + . ID=gene-NM058_12485;Name=NM058_12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12485 CP101611.1 Protein Homology CDS 2398870 2399307 . + 0 ID=cds-UTX07044.1;Parent=gene-NM058_12485;Dbxref=NCBI_GP:UTX07044.1;Name=UTX07044.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016763.2;locus_tag=NM058_12485;product=VanZ family protein;protein_id=UTX07044.1;transl_table=11 CP101611.1 Genbank gene 2399399 2399833 . - . ID=gene-NM058_12490;Name=dutA;gbkey=Gene;gene=dutA;gene_biotype=protein_coding;locus_tag=NM058_12490 CP101611.1 Protein Homology CDS 2399399 2399833 . - 0 ID=cds-UTX03999.1;Parent=gene-NM058_12490;Dbxref=NCBI_GP:UTX03999.1;Name=UTX03999.1;gbkey=CDS;gene=dutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389649.1;locus_tag=NM058_12490;product=dUTP diphosphatase DutA;protein_id=UTX03999.1;transl_table=11 CP101611.1 Genbank gene 2399852 2400265 . - . ID=gene-NM058_12495;Name=NM058_12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12495 CP101611.1 Protein Homology CDS 2399852 2400265 . - 0 ID=cds-UTX04000.1;Parent=gene-NM058_12495;Dbxref=NCBI_GP:UTX04000.1;Name=UTX04000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003238250.1;locus_tag=NM058_12495;product=DUF2691 family protein;protein_id=UTX04000.1;transl_table=11 CP101611.1 Genbank gene 2400716 2402131 . - . ID=gene-NM058_12500;Name=NM058_12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12500 CP101611.1 Protein Homology CDS 2400716 2402131 . - 0 ID=cds-UTX04001.1;Parent=gene-NM058_12500;Dbxref=NCBI_GP:UTX04001.1;Name=UTX04001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389645.2;locus_tag=NM058_12500;product=sugar porter family MFS transporter;protein_id=UTX04001.1;transl_table=11 CP101611.1 Genbank gene 2402605 2403240 . + . ID=gene-NM058_12505;Name=NM058_12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12505 CP101611.1 Protein Homology CDS 2402605 2403240 . + 0 ID=cds-UTX04002.1;Parent=gene-NM058_12505;Dbxref=NCBI_GP:UTX04002.1;Name=UTX04002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389644.1;locus_tag=NM058_12505;product=thermonuclease family protein;protein_id=UTX04002.1;transl_table=11 CP101611.1 Genbank gene 2403689 2404387 . - . ID=gene-NM058_12510;Name=NM058_12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12510 CP101611.1 Protein Homology CDS 2403689 2404387 . - 0 ID=cds-UTX04003.1;Parent=gene-NM058_12510;Dbxref=NCBI_GP:UTX04003.1;Name=UTX04003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003238262.1;locus_tag=NM058_12510;product=glycoside hydrolase family 11 protein;protein_id=UTX04003.1;transl_table=11 CP101611.1 Genbank gene 2404675 2406174 . - . ID=gene-NM058_12515;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=NM058_12515 CP101611.1 Protein Homology CDS 2404675 2406174 . - 0 ID=cds-UTX04004.1;Parent=gene-NM058_12515;Dbxref=NCBI_GP:UTX04004.1;Name=UTX04004.1;Ontology_term=GO:0005997,GO:0042732,GO:0004856,GO:0005515;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA,protein binding|0005515||IEA;go_process=xylulose metabolic process|0005997||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389643.1;locus_tag=NM058_12515;product=xylulokinase;protein_id=UTX04004.1;transl_table=11 CP101611.1 Genbank gene 2406324 2407661 . - . ID=gene-NM058_12520;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=NM058_12520 CP101611.1 Protein Homology CDS 2406324 2407661 . - 0 ID=cds-UTX04005.1;Parent=gene-NM058_12520;Dbxref=NCBI_GP:UTX04005.1;Name=UTX04005.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389642.2;locus_tag=NM058_12520;product=xylose isomerase;protein_id=UTX04005.1;transl_table=11 CP101611.1 Genbank gene 2407925 2409079 . + . ID=gene-NM058_12525;Name=NM058_12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12525 CP101611.1 Protein Homology CDS 2407925 2409079 . + 0 ID=cds-UTX04006.1;Parent=gene-NM058_12525;Dbxref=NCBI_GP:UTX04006.1;Name=UTX04006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389641.3;locus_tag=NM058_12525;product=ROK family protein;protein_id=UTX04006.1;transl_table=11 CP101611.1 Genbank pseudogene 2409205 2410805 . - . ID=gene-NM058_12530;Name=xynB;gbkey=Gene;gene=xynB;gene_biotype=pseudogene;locus_tag=NM058_12530;pseudo=true CP101611.1 Protein Homology CDS 2409205 2410805 . - 0 ID=cds-NM058_12530;Parent=gene-NM058_12530;Note=frameshifted;Ontology_term=GO:0045493,GO:0009044;gbkey=CDS;gene=xynB;go_function=xylan 1%2C4-beta-xylosidase activity|0009044||IEA;go_process=xylan catabolic process|0045493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389640.2;locus_tag=NM058_12530;product=xylan 1%2C4-beta-xylosidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2410848 2412239 . - . ID=gene-NM058_12535;Name=NM058_12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12535 CP101611.1 Protein Homology CDS 2410848 2412239 . - 0 ID=cds-UTX04007.1;Parent=gene-NM058_12535;Dbxref=NCBI_GP:UTX04007.1;Name=UTX04007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389639.2;locus_tag=NM058_12535;product=MFS transporter;protein_id=UTX04007.1;transl_table=11 CP101611.1 Genbank pseudogene 2412747 2413113 . + . ID=gene-NM058_12540;Name=NM058_12540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12540;pseudo=true CP101611.1 Protein Homology CDS 2412747 2413113 . + 0 ID=cds-NM058_12540;Parent=gene-NM058_12540;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004399048.1;locus_tag=NM058_12540;product=thermonuclease family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2413244 2413774 . - . ID=gene-NM058_12545;Name=NM058_12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12545 CP101611.1 Protein Homology CDS 2413244 2413774 . - 0 ID=cds-UTX04008.1;Parent=gene-NM058_12545;Dbxref=NCBI_GP:UTX04008.1;Name=UTX04008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003238274.1;locus_tag=NM058_12545;product=N-acetyltransferase;protein_id=UTX04008.1;transl_table=11 CP101611.1 Genbank gene 2414499 2415149 . - . ID=gene-NM058_12550;Name=catA;gbkey=Gene;gene=catA;gene_biotype=protein_coding;locus_tag=NM058_12550 CP101611.1 Protein Homology CDS 2414499 2415149 . - 0 ID=cds-UTX04009.1;Parent=gene-NM058_12550;Dbxref=NCBI_GP:UTX04009.1;Name=UTX04009.1;gbkey=CDS;gene=catA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017250848.1;locus_tag=NM058_12550;product=type A chloramphenicol O-acetyltransferase;protein_id=UTX04009.1;transl_table=11 CP101611.1 Genbank pseudogene 2415360 2415612 . - . ID=gene-NM058_12555;Name=NM058_12555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12555;pseudo=true CP101611.1 Protein Homology CDS 2415360 2415612 . - 0 ID=cds-NM058_12555;Parent=gene-NM058_12555;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390033.2;locus_tag=NM058_12555;product=UV damage repair protein UvrX;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2415605 2415889 . - . ID=gene-NM058_12560;Name=NM058_12560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12560;pseudo=true CP101611.1 Protein Homology CDS 2415605 2415889 . - 0 ID=cds-NM058_12560;Parent=gene-NM058_12560;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389776.1;locus_tag=NM058_12560;product=YolD-like family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2416235 2416705 . - . ID=gene-NM058_12565;Name=NM058_12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12565 CP101611.1 Protein Homology CDS 2416235 2416705 . - 0 ID=cds-UTX04010.1;Parent=gene-NM058_12565;Dbxref=NCBI_GP:UTX04010.1;Name=UTX04010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389638.3;locus_tag=NM058_12565;product=hypothetical protein;protein_id=UTX04010.1;transl_table=11 CP101611.1 Genbank gene 2416965 2417129 . - . ID=gene-NM058_12570;Name=NM058_12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12570 CP101611.1 Protein Homology CDS 2416965 2417129 . - 0 ID=cds-UTX04011.1;Parent=gene-NM058_12570;Dbxref=NCBI_GP:UTX04011.1;Name=UTX04011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097730.1;locus_tag=NM058_12570;product=hypothetical protein;protein_id=UTX04011.1;transl_table=11 CP101611.1 Genbank gene 2417408 2417872 . - . ID=gene-NM058_12575;Name=NM058_12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12575 CP101611.1 Protein Homology CDS 2417408 2417872 . - 0 ID=cds-UTX04012.1;Parent=gene-NM058_12575;Dbxref=NCBI_GP:UTX04012.1;Name=UTX04012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003220422.1;locus_tag=NM058_12575;product=hypothetical protein;protein_id=UTX04012.1;transl_table=11 CP101611.1 Genbank gene 2417958 2418269 . - . ID=gene-NM058_12580;Name=NM058_12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12580 CP101611.1 Protein Homology CDS 2417958 2418269 . - 0 ID=cds-UTX07045.1;Parent=gene-NM058_12580;Dbxref=NCBI_GP:UTX07045.1;Name=UTX07045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015483267.1;locus_tag=NM058_12580;product=hypothetical protein;protein_id=UTX07045.1;transl_table=11 CP101611.1 Genbank gene 2418276 2418419 . - . ID=gene-NM058_12585;Name=NM058_12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12585 CP101611.1 Protein Homology CDS 2418276 2418419 . - 0 ID=cds-UTX07046.1;Parent=gene-NM058_12585;Dbxref=NCBI_GP:UTX07046.1;Name=UTX07046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389972.1;locus_tag=NM058_12585;product=hypothetical protein;protein_id=UTX07046.1;transl_table=11 CP101611.1 Genbank pseudogene 2418435 2418642 . - . ID=gene-NM058_12590;Name=NM058_12590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12590;pseudo=true CP101611.1 Protein Homology CDS 2418435 2418642 . - 0 ID=cds-NM058_12590;Parent=gene-NM058_12590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389973.1;locus_tag=NM058_12590;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2418646 2418898 . - . ID=gene-NM058_12595;Name=NM058_12595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12595;pseudo=true CP101611.1 Protein Homology CDS 2418646 2418898 . - 0 ID=cds-NM058_12595;Parent=gene-NM058_12595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389974.1;locus_tag=NM058_12595;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2418969 2419055 . + . ID=gene-NM058_12600;Name=NM058_12600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12600;pseudo=true CP101611.1 Protein Homology CDS 2418969 2419055 . + 0 ID=cds-NM058_12600;Parent=gene-NM058_12600;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097748.1;locus_tag=NM058_12600;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2419209 2419562 . + . ID=gene-NM058_12605;Name=NM058_12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12605 CP101611.1 Protein Homology CDS 2419209 2419562 . + 0 ID=cds-UTX04013.1;Parent=gene-NM058_12605;Dbxref=NCBI_GP:UTX04013.1;Name=UTX04013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010499363.1;locus_tag=NM058_12605;product=helix-turn-helix transcriptional regulator;protein_id=UTX04013.1;transl_table=11 CP101611.1 Genbank gene 2419650 2420180 . - . ID=gene-NM058_12610;Name=NM058_12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12610 CP101611.1 Protein Homology CDS 2419650 2420180 . - 0 ID=cds-UTX04014.1;Parent=gene-NM058_12610;Dbxref=NCBI_GP:UTX04014.1;Name=UTX04014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012294214.1;locus_tag=NM058_12610;product=NAD(P)H-dependent oxidoreductase;protein_id=UTX04014.1;transl_table=11 CP101611.1 Genbank pseudogene 2420716 2421053 . - . ID=gene-NM058_12615;Name=NM058_12615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12615;pseudo=true CP101611.1 Protein Homology CDS 2420716 2421053 . - 0 ID=cds-NM058_12615;Parent=gene-NM058_12615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003325961.1;locus_tag=NM058_12615;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2421149 2421382 . + . ID=gene-NM058_12620;Name=NM058_12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12620 CP101611.1 Protein Homology CDS 2421149 2421382 . + 0 ID=cds-UTX04015.1;Parent=gene-NM058_12620;Dbxref=NCBI_GP:UTX04015.1;Name=UTX04015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014477024.1;locus_tag=NM058_12620;product=hypothetical protein;protein_id=UTX04015.1;transl_table=11 CP101611.1 Genbank gene 2421421 2421942 . - . ID=gene-NM058_12625;Name=NM058_12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12625 CP101611.1 Protein Homology CDS 2421421 2421942 . - 0 ID=cds-UTX04016.1;Parent=gene-NM058_12625;Dbxref=NCBI_GP:UTX04016.1;Name=UTX04016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258478.1;locus_tag=NM058_12625;product=hypothetical protein;protein_id=UTX04016.1;transl_table=11 CP101611.1 Genbank pseudogene 2422172 2422273 . - . ID=gene-NM058_12630;Name=NM058_12630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12630;pseudo=true CP101611.1 Protein Homology CDS 2422172 2422273 . - 0 ID=cds-NM058_12630;Parent=gene-NM058_12630;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390034.1;locus_tag=NM058_12630;product=YolD-like family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2422619 2423908 . - . ID=gene-NM058_12635;Name=NM058_12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12635 CP101611.1 Protein Homology CDS 2422619 2423908 . - 0 ID=cds-UTX04017.1;Parent=gene-NM058_12635;Dbxref=NCBI_GP:UTX04017.1;Name=UTX04017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014664230.1;locus_tag=NM058_12635;product=Na+/H+ antiporter NhaC family protein;protein_id=UTX04017.1;transl_table=11 CP101611.1 Genbank gene 2424396 2424752 . - . ID=gene-NM058_12640;Name=NM058_12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12640 CP101611.1 Protein Homology CDS 2424396 2424752 . - 0 ID=cds-UTX04018.1;Parent=gene-NM058_12640;Dbxref=NCBI_GP:UTX04018.1;Name=UTX04018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004398595.1;locus_tag=NM058_12640;product=hypothetical protein;protein_id=UTX04018.1;transl_table=11 CP101611.1 Genbank gene 2425440 2426774 . - . ID=gene-NM058_12645;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=NM058_12645 CP101611.1 Protein Homology CDS 2425440 2426774 . - 0 ID=cds-UTX04019.1;Parent=gene-NM058_12645;Dbxref=NCBI_GP:UTX04019.1;Name=UTX04019.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389628.1;locus_tag=NM058_12645;product=type I glutamate--ammonia ligase;protein_id=UTX04019.1;transl_table=11 CP101611.1 Genbank gene 2426832 2427239 . - . ID=gene-NM058_12650;Name=glnR;gbkey=Gene;gene=glnR;gene_biotype=protein_coding;locus_tag=NM058_12650 CP101611.1 Protein Homology CDS 2426832 2427239 . - 0 ID=cds-UTX04020.1;Parent=gene-NM058_12650;Dbxref=NCBI_GP:UTX04020.1;Name=UTX04020.1;gbkey=CDS;gene=glnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389627.1;locus_tag=NM058_12650;product=transcriptional repressor GlnR;protein_id=UTX04020.1;transl_table=11 CP101611.1 Genbank pseudogene 2427349 2428613 . - . ID=gene-NM058_12655;Name=NM058_12655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12655;pseudo=true CP101611.1 Protein Homology CDS 2427349 2428613 . - 0 ID=cds-NM058_12655;Parent=gene-NM058_12655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389626.2;locus_tag=NM058_12655;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2428631 2429893 . - . ID=gene-NM058_12660;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=NM058_12660 CP101611.1 Protein Homology CDS 2428631 2429893 . - 0 ID=cds-UTX04021.1;Parent=gene-NM058_12660;Dbxref=NCBI_GP:UTX04021.1;Name=UTX04021.1;Ontology_term=GO:0008150,GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389625.2;locus_tag=NM058_12660;product=GTPase HflX;protein_id=UTX04021.1;transl_table=11 CP101611.1 Genbank gene 2430026 2430994 . - . ID=gene-NM058_12665;Name=spoVK;gbkey=Gene;gene=spoVK;gene_biotype=protein_coding;locus_tag=NM058_12665 CP101611.1 Protein Homology CDS 2430026 2430994 . - 0 ID=cds-UTX04022.1;Parent=gene-NM058_12665;Dbxref=NCBI_GP:UTX04022.1;Name=UTX04022.1;Ontology_term=GO:0030436,GO:0016887;gbkey=CDS;gene=spoVK;go_function=ATP hydrolysis activity|0016887||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258474.1;locus_tag=NM058_12665;product=stage V sporulation protein K;protein_id=UTX04022.1;transl_table=11 CP101611.1 Genbank gene 2431855 2432622 . + . ID=gene-NM058_12670;Name=cwlC;gbkey=Gene;gene=cwlC;gene_biotype=protein_coding;locus_tag=NM058_12670 CP101611.1 Protein Homology CDS 2431855 2432622 . + 0 ID=cds-UTX04023.1;Parent=gene-NM058_12670;Dbxref=NCBI_GP:UTX04023.1;Name=UTX04023.1;gbkey=CDS;gene=cwlC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389623.2;locus_tag=NM058_12670;product=sporulation-specific N-acetylmuramoyl-L-alanine amidase;protein_id=UTX04023.1;transl_table=11 CP101611.1 Genbank gene 2432685 2433305 . - . ID=gene-NM058_12675;Name=NM058_12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12675 CP101611.1 Protein Homology CDS 2432685 2433305 . - 0 ID=cds-UTX04024.1;Parent=gene-NM058_12675;Dbxref=NCBI_GP:UTX04024.1;Name=UTX04024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389622.1;locus_tag=NM058_12675;product=hypothetical protein;protein_id=UTX04024.1;transl_table=11 CP101611.1 Genbank gene 2433353 2434342 . - . ID=gene-NM058_12680;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=NM058_12680 CP101611.1 Protein Homology CDS 2433353 2434342 . - 0 ID=cds-UTX04025.1;Parent=gene-NM058_12680;Dbxref=NCBI_GP:UTX04025.1;Name=UTX04025.1;Ontology_term=GO:0009265,GO:0004748,GO:0030145,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,manganese ion binding|0030145||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389621.1;locus_tag=NM058_12680;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=UTX04025.1;transl_table=11 CP101611.1 Genbank gene 2434360 2436462 . - . ID=gene-NM058_12685;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=NM058_12685 CP101611.1 Protein Homology CDS 2434360 2436462 . - 0 ID=cds-UTX04026.1;Parent=gene-NM058_12685;Dbxref=NCBI_GP:UTX04026.1;Name=UTX04026.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389620.1;locus_tag=NM058_12685;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=UTX04026.1;transl_table=11 CP101611.1 Genbank gene 2436422 2436814 . - . ID=gene-NM058_12690;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=NM058_12690 CP101611.1 Protein Homology CDS 2436422 2436814 . - 0 ID=cds-UTX04027.1;Parent=gene-NM058_12690;Dbxref=NCBI_GP:UTX04027.1;Name=UTX04027.1;Ontology_term=GO:0009263;gbkey=CDS;gene=nrdI;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389619.1;locus_tag=NM058_12690;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=UTX04027.1;transl_table=11 CP101611.1 Genbank gene 2437057 2437287 . - . ID=gene-NM058_12695;Name=NM058_12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12695 CP101611.1 Protein Homology CDS 2437057 2437287 . - 0 ID=cds-UTX04028.1;Parent=gene-NM058_12695;Dbxref=NCBI_GP:UTX04028.1;Name=UTX04028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389618.1;locus_tag=NM058_12695;product=hypothetical protein;protein_id=UTX04028.1;transl_table=11 CP101611.1 Genbank gene 2437369 2437641 . - . ID=gene-NM058_12700;Name=NM058_12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12700 CP101611.1 Protein Homology CDS 2437369 2437641 . - 0 ID=cds-UTX04029.1;Parent=gene-NM058_12700;Dbxref=NCBI_GP:UTX04029.1;Name=UTX04029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389617.1;locus_tag=NM058_12700;product=YmzC family protein;protein_id=UTX04029.1;transl_table=11 CP101611.1 Genbank gene 2437826 2438047 . - . ID=gene-NM058_12705;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=NM058_12705 CP101611.1 Protein Homology CDS 2437826 2438047 . - 0 ID=cds-UTX04030.1;Parent=gene-NM058_12705;Dbxref=NCBI_GP:UTX04030.1;Name=UTX04030.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389616.1;locus_tag=NM058_12705;product=RNA chaperone Hfq;protein_id=UTX04030.1;transl_table=11 CP101611.1 Genbank pseudogene 2438087 2439028 . - . ID=gene-NM058_12710;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=pseudogene;locus_tag=NM058_12710;pseudo=true CP101611.1 Protein Homology CDS 2438087 2439028 . - 0 ID=cds-NM058_12710;Parent=gene-NM058_12710;Note=frameshifted;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389615.2;locus_tag=NM058_12710;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2439128 2439541 . - . ID=gene-NM058_12715;Name=NM058_12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12715 CP101611.1 Protein Homology CDS 2439128 2439541 . - 0 ID=cds-UTX04031.1;Parent=gene-NM058_12715;Dbxref=NCBI_GP:UTX04031.1;Name=UTX04031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389614.2;locus_tag=NM058_12715;product=YmaF family protein;protein_id=UTX04031.1;transl_table=11 CP101611.1 Genbank gene 2439631 2439864 . + . ID=gene-NM058_12720;Name=NM058_12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12720 CP101611.1 Protein Homology CDS 2439631 2439864 . + 0 ID=cds-UTX04032.1;Parent=gene-NM058_12720;Dbxref=NCBI_GP:UTX04032.1;Name=UTX04032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389613.2;locus_tag=NM058_12720;product=hypothetical protein;protein_id=UTX04032.1;transl_table=11 CP101611.1 Genbank gene 2440006 2440323 . + . ID=gene-NM058_12725;Name=ebrA;gbkey=Gene;gene=ebrA;gene_biotype=protein_coding;locus_tag=NM058_12725 CP101611.1 Protein Homology CDS 2440006 2440323 . + 0 ID=cds-UTX04033.1;Parent=gene-NM058_12725;Dbxref=NCBI_GP:UTX04033.1;Name=UTX04033.1;gbkey=CDS;gene=ebrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003221087.1;locus_tag=NM058_12725;product=multidrug efflux SMR transporter subunit EbrA;protein_id=UTX04033.1;transl_table=11 CP101611.1 Genbank gene 2440336 2440665 . + . ID=gene-NM058_12730;Name=ebrB;gbkey=Gene;gene=ebrB;gene_biotype=protein_coding;locus_tag=NM058_12730 CP101611.1 Protein Homology CDS 2440336 2440665 . + 0 ID=cds-UTX04034.1;Parent=gene-NM058_12730;Dbxref=NCBI_GP:UTX04034.1;Name=UTX04034.1;gbkey=CDS;gene=ebrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389611.1;locus_tag=NM058_12730;product=multidrug efflux SMR transporter subunit EbrB;protein_id=UTX04034.1;transl_table=11 CP101611.1 Genbank gene 2440702 2441154 . - . ID=gene-NM058_12735;Name=NM058_12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12735 CP101611.1 Protein Homology CDS 2440702 2441154 . - 0 ID=cds-UTX04035.1;Parent=gene-NM058_12735;Dbxref=NCBI_GP:UTX04035.1;Name=UTX04035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389610.1;locus_tag=NM058_12735;product=OsmC family protein;protein_id=UTX04035.1;transl_table=11 CP101611.1 Genbank gene 2441229 2441936 . - . ID=gene-NM058_12740;Name=NM058_12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12740 CP101611.1 Protein Homology CDS 2441229 2441936 . - 0 ID=cds-UTX04036.1;Parent=gene-NM058_12740;Dbxref=NCBI_GP:UTX04036.1;Name=UTX04036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389609.1;locus_tag=NM058_12740;product=poly-gamma-glutamate hydrolase family protein;protein_id=UTX04036.1;transl_table=11 CP101611.1 Genbank gene 2442222 2442455 . - . ID=gene-NM058_12745;Name=NM058_12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12745 CP101611.1 Protein Homology CDS 2442222 2442455 . - 0 ID=cds-UTX04037.1;Parent=gene-NM058_12745;Dbxref=NCBI_GP:UTX04037.1;Name=UTX04037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014476869.1;locus_tag=NM058_12745;product=WYL domain-containing protein;protein_id=UTX04037.1;transl_table=11 CP101611.1 Genbank pseudogene 2442680 2444006 . + . ID=gene-NM058_12750;Name=aprX;gbkey=Gene;gene=aprX;gene_biotype=pseudogene;locus_tag=NM058_12750;pseudo=true CP101611.1 Protein Homology CDS 2442680 2444006 . + 0 ID=cds-NM058_12750;Parent=gene-NM058_12750;Note=frameshifted;gbkey=CDS;gene=aprX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389608.1;locus_tag=NM058_12750;product=serine protease AprX;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2444117 2444941 . + . ID=gene-NM058_12755;Name=NM058_12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12755 CP101611.1 Protein Homology CDS 2444117 2444941 . + 0 ID=cds-UTX04038.1;Parent=gene-NM058_12755;Dbxref=NCBI_GP:UTX04038.1;Name=UTX04038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389607.2;locus_tag=NM058_12755;product=hypothetical protein;protein_id=UTX04038.1;transl_table=11 CP101611.1 Genbank gene 2445020 2445376 . + . ID=gene-NM058_12760;Name=NM058_12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12760 CP101611.1 Protein Homology CDS 2445020 2445376 . + 0 ID=cds-UTX04039.1;Parent=gene-NM058_12760;Dbxref=NCBI_GP:UTX04039.1;Name=UTX04039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389606.3;locus_tag=NM058_12760;product=hypothetical protein;protein_id=UTX04039.1;transl_table=11 CP101611.1 Genbank gene 2445562 2446152 . - . ID=gene-NM058_12765;Name=NM058_12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12765 CP101611.1 Protein Homology CDS 2445562 2446152 . - 0 ID=cds-UTX04040.1;Parent=gene-NM058_12765;Dbxref=NCBI_GP:UTX04040.1;Name=UTX04040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019714472.1;locus_tag=NM058_12765;product=TetR family transcriptional regulator;protein_id=UTX04040.1;transl_table=11 CP101611.1 Genbank gene 2446273 2446830 . + . ID=gene-NM058_12770;Name=NM058_12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12770 CP101611.1 Protein Homology CDS 2446273 2446830 . + 0 ID=cds-UTX04041.1;Parent=gene-NM058_12770;Dbxref=NCBI_GP:UTX04041.1;Name=UTX04041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389588.1;locus_tag=NM058_12770;product=hypothetical protein;protein_id=UTX04041.1;transl_table=11 CP101611.1 Genbank pseudogene 2447006 2447472 . + . ID=gene-NM058_12775;Name=NM058_12775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12775;pseudo=true CP101611.1 Protein Homology CDS 2447006 2447472 . + 0 ID=cds-NM058_12775;Parent=gene-NM058_12775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003238408.1;locus_tag=NM058_12775;product=regulatory YrvL family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2448141 2448662 . - . ID=gene-NM058_12780;Name=NM058_12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12780 CP101611.1 GeneMarkS-2+ CDS 2448141 2448662 . - 0 ID=cds-UTX04042.1;Parent=gene-NM058_12780;Dbxref=NCBI_GP:UTX04042.1;Name=UTX04042.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_12780;product=hypothetical protein;protein_id=UTX04042.1;transl_table=11 CP101611.1 Genbank gene 2449077 2449445 . - . ID=gene-NM058_12785;Name=NM058_12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12785 CP101611.1 Protein Homology CDS 2449077 2449445 . - 0 ID=cds-UTX04043.1;Parent=gene-NM058_12785;Dbxref=NCBI_GP:UTX04043.1;Name=UTX04043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258443.1;locus_tag=NM058_12785;product=hypothetical protein;protein_id=UTX04043.1;transl_table=11 CP101611.1 Genbank gene 2449542 2449922 . - . ID=gene-NM058_12790;Name=NM058_12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12790 CP101611.1 Protein Homology CDS 2449542 2449922 . - 0 ID=cds-UTX04044.1;Parent=gene-NM058_12790;Dbxref=NCBI_GP:UTX04044.1;Name=UTX04044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258442.1;locus_tag=NM058_12790;product=hypothetical protein;protein_id=UTX04044.1;transl_table=11 CP101611.1 Genbank gene 2449941 2450198 . - . ID=gene-NM058_12795;Name=NM058_12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12795 CP101611.1 GeneMarkS-2+ CDS 2449941 2450198 . - 0 ID=cds-UTX04045.1;Parent=gene-NM058_12795;Dbxref=NCBI_GP:UTX04045.1;Name=UTX04045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_12795;product=hypothetical protein;protein_id=UTX04045.1;transl_table=11 CP101611.1 Genbank pseudogene 2450506 2450875 . - . ID=gene-NM058_12800;Name=NM058_12800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12800;pseudo=true CP101611.1 Protein Homology CDS 2450506 2450875 . - 0 ID=cds-NM058_12800;Parent=gene-NM058_12800;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016077325.1;locus_tag=NM058_12800;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2451490 2451645 . + . ID=gene-NM058_12805;Name=NM058_12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12805 CP101611.1 Protein Homology CDS 2451490 2451645 . + 0 ID=cds-UTX07047.1;Parent=gene-NM058_12805;Dbxref=NCBI_GP:UTX07047.1;Name=UTX07047.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=NM058_12805;product=tyrosine-type recombinase/integrase;protein_id=UTX07047.1;transl_table=11 CP101611.1 Genbank gene 2451767 2453653 . - . ID=gene-NM058_12810;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=NM058_12810 CP101611.1 Protein Homology CDS 2451767 2453653 . - 0 ID=cds-UTX04046.1;Parent=gene-NM058_12810;Dbxref=NCBI_GP:UTX04046.1;Name=UTX04046.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389587.1;locus_tag=NM058_12810;product=DNA mismatch repair endonuclease MutL;protein_id=UTX04046.1;transl_table=11 CP101611.1 Genbank pseudogene 2453669 2456248 . - . ID=gene-NM058_12815;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=pseudogene;locus_tag=NM058_12815;pseudo=true CP101611.1 Protein Homology CDS 2453669 2456248 . - 0 ID=cds-NM058_12815;Parent=gene-NM058_12815;Note=frameshifted;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389586.2;locus_tag=NM058_12815;product=DNA mismatch repair protein MutS;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2456381 2456926 . - . ID=gene-NM058_12820;Name=cotE;gbkey=Gene;gene=cotE;gene_biotype=protein_coding;locus_tag=NM058_12820 CP101611.1 Protein Homology CDS 2456381 2456926 . - 0 ID=cds-UTX04047.1;Parent=gene-NM058_12820;Dbxref=NCBI_GP:UTX04047.1;Name=UTX04047.1;gbkey=CDS;gene=cotE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389585.1;locus_tag=NM058_12820;product=outer spore coat protein CotE;protein_id=UTX04047.1;transl_table=11 CP101611.1 Genbank gene 2457189 2457620 . - . ID=gene-NM058_12825;Name=ricA;gbkey=Gene;gene=ricA;gene_biotype=protein_coding;gene_synonym=ymcA;locus_tag=NM058_12825 CP101611.1 Protein Homology CDS 2457189 2457620 . - 0 ID=cds-UTX04048.1;Parent=gene-NM058_12825;Dbxref=NCBI_GP:UTX04048.1;Name=UTX04048.1;gbkey=CDS;gene=ricA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013352323.1;locus_tag=NM058_12825;product=RicAFT regulatory complex protein RicA;protein_id=UTX04048.1;transl_table=11 CP101611.1 Genbank gene 2457622 2459151 . - . ID=gene-NM058_12830;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=NM058_12830 CP101611.1 Protein Homology CDS 2457622 2459151 . - 0 ID=cds-UTX04049.1;Parent=gene-NM058_12830;Dbxref=NCBI_GP:UTX04049.1;Name=UTX04049.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389583.1;locus_tag=NM058_12830;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=UTX04049.1;transl_table=11 CP101611.1 Genbank gene 2459296 2460474 . - . ID=gene-NM058_12835;Name=NM058_12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12835 CP101611.1 Protein Homology CDS 2459296 2460474 . - 0 ID=cds-UTX04050.1;Parent=gene-NM058_12835;Dbxref=NCBI_GP:UTX04050.1;Name=UTX04050.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389582.1;locus_tag=NM058_12835;product=glycine C-acetyltransferase;protein_id=UTX04050.1;transl_table=11 CP101611.1 Genbank gene 2460488 2461531 . - . ID=gene-NM058_12840;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=NM058_12840 CP101611.1 Protein Homology CDS 2460488 2461531 . - 0 ID=cds-UTX04051.1;Parent=gene-NM058_12840;Dbxref=NCBI_GP:UTX04051.1;Name=UTX04051.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389581.1;locus_tag=NM058_12840;product=L-threonine 3-dehydrogenase;protein_id=UTX04051.1;transl_table=11 CP101611.1 Genbank gene 2461797 2462057 . - . ID=gene-NM058_12845;Name=spoVS;gbkey=Gene;gene=spoVS;gene_biotype=protein_coding;locus_tag=NM058_12845 CP101611.1 Protein Homology CDS 2461797 2462057 . - 0 ID=cds-UTX04052.1;Parent=gene-NM058_12845;Dbxref=NCBI_GP:UTX04052.1;Name=UTX04052.1;gbkey=CDS;gene=spoVS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389580.1;locus_tag=NM058_12845;product=stage V sporulation protein SpoVS;protein_id=UTX04052.1;transl_table=11 CP101611.1 Genbank pseudogene 2462257 2463050 . - . ID=gene-NM058_12850;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=pseudogene;gene_synonym=pdeB;locus_tag=NM058_12850;pseudo=true CP101611.1 Protein Homology CDS 2462257 2463050 . - 0 ID=cds-NM058_12850;Parent=gene-NM058_12850;Note=frameshifted;gbkey=CDS;gene=ymdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389579.2;locus_tag=NM058_12850;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2463120 2464682 . - . ID=gene-NM058_12855;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=NM058_12855 CP101611.1 Protein Homology CDS 2463120 2464682 . - 0 ID=cds-UTX04053.1;Parent=gene-NM058_12855;Dbxref=NCBI_GP:UTX04053.1;Name=UTX04053.1;Ontology_term=GO:0006402,GO:0004521;gbkey=CDS;gene=rny;go_function=endoribonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389578.1;locus_tag=NM058_12855;product=ribonuclease Y;protein_id=UTX04053.1;transl_table=11 CP101611.1 Genbank gene 2464958 2466136 . - . ID=gene-NM058_12860;Name=NM058_12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12860 CP101611.1 Protein Homology CDS 2464958 2466136 . - 0 ID=cds-UTX04054.1;Parent=gene-NM058_12860;Dbxref=NCBI_GP:UTX04054.1;Name=UTX04054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389577.1;locus_tag=NM058_12860;product=beta-lactamase family protein;protein_id=UTX04054.1;transl_table=11 CP101611.1 Genbank gene 2466304 2467350 . - . ID=gene-NM058_12865;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=NM058_12865 CP101611.1 Protein Homology CDS 2466304 2467350 . - 0 ID=cds-UTX04055.1;Parent=gene-NM058_12865;Dbxref=NCBI_GP:UTX04055.1;Name=UTX04055.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389576.2;locus_tag=NM058_12865;product=recombinase RecA;protein_id=UTX04055.1;transl_table=11 CP101611.1 Genbank gene 2467523 2468773 . - . ID=gene-NM058_12870;Name=NM058_12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12870 CP101611.1 Protein Homology CDS 2467523 2468773 . - 0 ID=cds-UTX04056.1;Parent=gene-NM058_12870;Dbxref=NCBI_GP:UTX04056.1;Name=UTX04056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389575.2;locus_tag=NM058_12870;product=competence/damage-inducible protein A;protein_id=UTX04056.1;transl_table=11 CP101611.1 Genbank gene 2468792 2469373 . - . ID=gene-NM058_12875;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=NM058_12875 CP101611.1 Protein Homology CDS 2468792 2469373 . - 0 ID=cds-UTX04057.1;Parent=gene-NM058_12875;Dbxref=NCBI_GP:UTX04057.1;Name=UTX04057.1;Ontology_term=GO:0008654,GO:0008444;gbkey=CDS;gene=pgsA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389574.2;locus_tag=NM058_12875;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=UTX04057.1;transl_table=11 CP101611.1 Genbank pseudogene 2469423 2470290 . - . ID=gene-NM058_12880;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=pseudogene;locus_tag=NM058_12880;pseudo=true CP101611.1 Protein Homology CDS 2469423 2470290 . - 0 ID=cds-NM058_12880;Parent=gene-NM058_12880;Note=frameshifted;gbkey=CDS;gene=rodZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389573.3;locus_tag=NM058_12880;product=cell shape determination protein RodZ;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2470357 2471148 . - . ID=gene-NM058_12885;Name=NM058_12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12885 CP101611.1 Protein Homology CDS 2470357 2471148 . - 0 ID=cds-UTX04058.1;Parent=gene-NM058_12885;Dbxref=NCBI_GP:UTX04058.1;Name=UTX04058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010327982.1;locus_tag=NM058_12885;product=YmfK family protein;protein_id=UTX04058.1;transl_table=11 CP101611.1 Genbank gene 2471278 2471535 . - . ID=gene-NM058_12890;Name=NM058_12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12890 CP101611.1 Protein Homology CDS 2471278 2471535 . - 0 ID=cds-UTX04059.1;Parent=gene-NM058_12890;Dbxref=NCBI_GP:UTX04059.1;Name=UTX04059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389570.1;locus_tag=NM058_12890;product=DUF3243 domain-containing protein;protein_id=UTX04059.1;transl_table=11 CP101611.1 Genbank gene 2471616 2472344 . - . ID=gene-NM058_12895;Name=efpI;gbkey=Gene;gene=efpI;gene_biotype=protein_coding;locus_tag=NM058_12895 CP101611.1 Protein Homology CDS 2471616 2472344 . - 0 ID=cds-UTX04060.1;Parent=gene-NM058_12895;Dbxref=NCBI_GP:UTX04060.1;Name=UTX04060.1;gbkey=CDS;gene=efpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389569.2;locus_tag=NM058_12895;product=EF-P-5 aminopentanone reductase;protein_id=UTX04060.1;transl_table=11 CP101611.1 Genbank gene 2472399 2473685 . - . ID=gene-NM058_12900;Name=NM058_12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12900 CP101611.1 Protein Homology CDS 2472399 2473685 . - 0 ID=cds-UTX04061.1;Parent=gene-NM058_12900;Dbxref=NCBI_GP:UTX04061.1;Name=UTX04061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389568.2;locus_tag=NM058_12900;product=insulinase family protein;protein_id=UTX04061.1;transl_table=11 CP101611.1 Genbank gene 2473682 2474962 . - . ID=gene-NM058_12905;Name=NM058_12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12905 CP101611.1 Protein Homology CDS 2473682 2474962 . - 0 ID=cds-UTX04062.1;Parent=gene-NM058_12905;Dbxref=NCBI_GP:UTX04062.1;Name=UTX04062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389566.2;locus_tag=NM058_12905;product=insulinase family protein;protein_id=UTX04062.1;transl_table=11 CP101611.1 Genbank gene 2475213 2476424 . - . ID=gene-NM058_12910;Name=bcbE;gbkey=Gene;gene=bcbE;gene_biotype=protein_coding;locus_tag=NM058_12910 CP101611.1 Protein Homology CDS 2475213 2476424 . - 0 ID=cds-UTX04063.1;Parent=gene-NM058_12910;Dbxref=NCBI_GP:UTX04063.1;Name=UTX04063.1;gbkey=CDS;gene=bcbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389564.2;locus_tag=NM058_12910;product=bacillibactin exporter BcbE;protein_id=UTX04063.1;transl_table=11 CP101611.1 Genbank gene 2476549 2477274 . - . ID=gene-NM058_12915;Name=NM058_12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12915 CP101611.1 Protein Homology CDS 2476549 2477274 . - 0 ID=cds-UTX04064.1;Parent=gene-NM058_12915;Dbxref=NCBI_GP:UTX04064.1;Name=UTX04064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389563.1;locus_tag=NM058_12915;product=GntR family transcriptional regulator;protein_id=UTX04064.1;transl_table=11 CP101611.1 Genbank gene 2477418 2479781 . - . ID=gene-NM058_12920;Name=spoIIIE;gbkey=Gene;gene=spoIIIE;gene_biotype=protein_coding;locus_tag=NM058_12920 CP101611.1 Protein Homology CDS 2477418 2479781 . - 0 ID=cds-UTX04065.1;Parent=gene-NM058_12920;Dbxref=NCBI_GP:UTX04065.1;Name=UTX04065.1;gbkey=CDS;gene=spoIIIE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389562.3;locus_tag=NM058_12920;product=DNA translocase SpoIIIE;protein_id=UTX04065.1;transl_table=11 CP101611.1 Genbank gene 2479909 2480121 . - . ID=gene-NM058_12925;Name=tepJ;gbkey=Gene;gene=tepJ;gene_biotype=protein_coding;locus_tag=NM058_12925 CP101611.1 Protein Homology CDS 2479909 2480121 . - 0 ID=cds-UTX04066.1;Parent=gene-NM058_12925;Dbxref=NCBI_GP:UTX04066.1;Name=UTX04066.1;gbkey=CDS;gene=tepJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097729.1;locus_tag=NM058_12925;product=TepA modulator TepJ;protein_id=UTX04066.1;transl_table=11 CP101611.1 Genbank gene 2480118 2480855 . - . ID=gene-NM058_12930;Name=tepA;gbkey=Gene;gene=tepA;gene_biotype=protein_coding;locus_tag=NM058_12930 CP101611.1 Protein Homology CDS 2480118 2480855 . - 0 ID=cds-UTX04067.1;Parent=gene-NM058_12930;Dbxref=NCBI_GP:UTX04067.1;Name=UTX04067.1;gbkey=CDS;gene=tepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389561.3;locus_tag=NM058_12930;product=translocation-enhancing protein TepA;protein_id=UTX04067.1;transl_table=11 CP101611.1 Genbank gene 2480971 2482638 . - . ID=gene-NM058_12935;Name=rnjB;gbkey=Gene;gene=rnjB;gene_biotype=protein_coding;locus_tag=NM058_12935 CP101611.1 Protein Homology CDS 2480971 2482638 . - 0 ID=cds-UTX04068.1;Parent=gene-NM058_12935;Dbxref=NCBI_GP:UTX04068.1;Name=UTX04068.1;Ontology_term=GO:0006364,GO:0006397,GO:0004534;gbkey=CDS;gene=rnjB;go_function=5'-3' exoribonuclease activity|0004534||IEA;go_process=rRNA processing|0006364||IEA,mRNA processing|0006397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389560.2;locus_tag=NM058_12935;product=ribonuclease J2;protein_id=UTX04068.1;transl_table=11 CP101611.1 Genbank pseudogene 2482817 2483688 . - . ID=gene-NM058_12940;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=pseudogene;locus_tag=NM058_12940;pseudo=true CP101611.1 Protein Homology CDS 2482817 2483688 . - 0 ID=cds-NM058_12940;Parent=gene-NM058_12940;Note=frameshifted;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389559.1;locus_tag=NM058_12940;product=4-hydroxy-tetrahydrodipicolinate synthase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2483719 2484931 . - . ID=gene-NM058_12945;Name=dapG;gbkey=Gene;gene=dapG;gene_biotype=pseudogene;locus_tag=NM058_12945;pseudo=true CP101611.1 Protein Homology CDS 2483719 2484931 . - 0 ID=cds-NM058_12945;Parent=gene-NM058_12945;Note=frameshifted;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=dapG;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389558.2;locus_tag=NM058_12945;product=aspartate kinase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2485023 2486063 . - . ID=gene-NM058_12950;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=NM058_12950 CP101611.1 Protein Homology CDS 2485023 2486063 . - 0 ID=cds-UTX04069.1;Parent=gene-NM058_12950;Dbxref=NCBI_GP:UTX04069.1;Name=UTX04069.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389557.1;locus_tag=NM058_12950;product=aspartate-semialdehyde dehydrogenase;protein_id=UTX04069.1;transl_table=11 CP101611.1 Genbank gene 2486189 2486791 . - . ID=gene-NM058_12955;Name=dpaB;gbkey=Gene;gene=dpaB;gene_biotype=protein_coding;locus_tag=NM058_12955 CP101611.1 Protein Homology CDS 2486189 2486791 . - 0 ID=cds-UTX04070.1;Parent=gene-NM058_12955;Dbxref=NCBI_GP:UTX04070.1;Name=UTX04070.1;Ontology_term=GO:0030436,GO:0003824;gbkey=CDS;gene=dpaB;go_function=catalytic activity|0003824||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389556.1;locus_tag=NM058_12955;product=dipicolinate synthase subunit B;protein_id=UTX04070.1;transl_table=11 CP101611.1 Genbank gene 2486794 2487687 . - . ID=gene-NM058_12960;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=NM058_12960 CP101611.1 Protein Homology CDS 2486794 2487687 . - 0 ID=cds-UTX04071.1;Parent=gene-NM058_12960;Dbxref=NCBI_GP:UTX04071.1;Name=UTX04071.1;Ontology_term=GO:0030436,GO:0003824;gbkey=CDS;gene=dpaA;go_function=catalytic activity|0003824||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389555.1;locus_tag=NM058_12960;product=dipicolinic acid synthetase subunit A;protein_id=UTX04071.1;transl_table=11 CP101611.1 Genbank gene 2487877 2488134 . - . ID=gene-NM058_12965;Name=NM058_12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12965 CP101611.1 Protein Homology CDS 2487877 2488134 . - 0 ID=cds-UTX04072.1;Parent=gene-NM058_12965;Dbxref=NCBI_GP:UTX04072.1;Name=UTX04072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389554.1;locus_tag=NM058_12965;product=YlmC/YmxH family sporulation protein;protein_id=UTX04072.1;transl_table=11 CP101611.1 Genbank gene 2488212 2489441 . - . ID=gene-NM058_12970;Name=NM058_12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_12970 CP101611.1 Protein Homology CDS 2488212 2489441 . - 0 ID=cds-UTX04073.1;Parent=gene-NM058_12970;Dbxref=NCBI_GP:UTX04073.1;Name=UTX04073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389553.2;locus_tag=NM058_12970;product=insulinase family protein;protein_id=UTX04073.1;transl_table=11 CP101611.1 Genbank pseudogene 2489481 2490439 . - . ID=gene-NM058_12975;Name=NM058_12975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_12975;pseudo=true CP101611.1 Protein Homology CDS 2489481 2490439 . - 0 ID=cds-NM058_12975;Parent=gene-NM058_12975;Note=frameshifted;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389552.1;locus_tag=NM058_12975;product=polysaccharide deacetylase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2490556 2492673 . - . ID=gene-NM058_12980;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=NM058_12980 CP101611.1 Protein Homology CDS 2490556 2492673 . - 0 ID=cds-UTX04074.1;Parent=gene-NM058_12980;Dbxref=NCBI_GP:UTX04074.1;Name=UTX04074.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389551.1;locus_tag=NM058_12980;product=polyribonucleotide nucleotidyltransferase;protein_id=UTX04074.1;transl_table=11 CP101611.1 Genbank gene 2492846 2493115 . - . ID=gene-NM058_12985;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=NM058_12985 CP101611.1 Protein Homology CDS 2492846 2493115 . - 0 ID=cds-UTX04075.1;Parent=gene-NM058_12985;Dbxref=NCBI_GP:UTX04075.1;Name=UTX04075.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010898561.1;locus_tag=NM058_12985;product=30S ribosomal protein S15;protein_id=UTX04075.1;transl_table=11 CP101611.1 Genbank gene 2493272 2494222 . - . ID=gene-NM058_12990;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=NM058_12990 CP101611.1 Protein Homology CDS 2493272 2494222 . - 0 ID=cds-UTX04076.1;Parent=gene-NM058_12990;Dbxref=NCBI_GP:UTX04076.1;Name=UTX04076.1;gbkey=CDS;gene=ribF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389549.1;locus_tag=NM058_12990;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=UTX04076.1;transl_table=11 CP101611.1 Genbank gene 2494241 2495170 . - . ID=gene-NM058_12995;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=NM058_12995 CP101611.1 Protein Homology CDS 2494241 2495170 . - 0 ID=cds-UTX04077.1;Parent=gene-NM058_12995;Dbxref=NCBI_GP:UTX04077.1;Name=UTX04077.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389548.1;locus_tag=NM058_12995;product=tRNA pseudouridine(55) synthase TruB;protein_id=UTX04077.1;transl_table=11 CP101611.1 Genbank gene 2495254 2495607 . - . ID=gene-NM058_13000;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=NM058_13000 CP101611.1 Protein Homology CDS 2495254 2495607 . - 0 ID=cds-UTX04078.1;Parent=gene-NM058_13000;Dbxref=NCBI_GP:UTX04078.1;Name=UTX04078.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389547.1;locus_tag=NM058_13000;product=30S ribosome-binding factor RbfA;protein_id=UTX04078.1;transl_table=11 CP101611.1 Genbank gene 2495624 2495902 . - . ID=gene-NM058_13005;Name=NM058_13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13005 CP101611.1 Protein Homology CDS 2495624 2495902 . - 0 ID=cds-UTX04079.1;Parent=gene-NM058_13005;Dbxref=NCBI_GP:UTX04079.1;Name=UTX04079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003328897.1;locus_tag=NM058_13005;product=DUF503 domain-containing protein;protein_id=UTX04079.1;transl_table=11 CP101611.1 Genbank pseudogene 2495899 2498050 . - . ID=gene-NM058_13010;Name=infB;gbkey=Gene;gene=infB;gene_biotype=pseudogene;locus_tag=NM058_13010;pseudo=true CP101611.1 Protein Homology CDS 2495899 2498050 . - 0 ID=cds-NM058_13010;Parent=gene-NM058_13010;Note=frameshifted;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389545.1;locus_tag=NM058_13010;product=translation initiation factor IF-2;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2498070 2498372 . - . ID=gene-NM058_13015;Name=NM058_13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13015 CP101611.1 Protein Homology CDS 2498070 2498372 . - 0 ID=cds-UTX04080.1;Parent=gene-NM058_13015;Dbxref=NCBI_GP:UTX04080.1;Name=UTX04080.1;Ontology_term=GO:0003723,GO:0003735;gbkey=CDS;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389544.1;locus_tag=NM058_13015;product=YlxQ family RNA-binding protein;protein_id=UTX04080.1;transl_table=11 CP101611.1 Genbank pseudogene 2498374 2498647 . - . ID=gene-NM058_13020;Name=rulR;gbkey=Gene;gene=rulR;gene_biotype=pseudogene;gene_synonym=ylxR;locus_tag=NM058_13020;pseudo=true CP101611.1 Protein Homology CDS 2498374 2498647 . - 0 ID=cds-NM058_13020;Parent=gene-NM058_13020;Note=frameshifted;gbkey=CDS;gene=rulR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389543.1;locus_tag=NM058_13020;product=glucose-induced regulator RulR;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2498661 2499780 . - . ID=gene-NM058_13025;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=pseudogene;locus_tag=NM058_13025;pseudo=true CP101611.1 Protein Homology CDS 2498661 2499780 . - 0 ID=cds-NM058_13025;Parent=gene-NM058_13025;Note=frameshifted;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription%2C termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389542.1;locus_tag=NM058_13025;product=transcription termination factor NusA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2499815 2500285 . - . ID=gene-NM058_13030;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=NM058_13030 CP101611.1 Protein Homology CDS 2499815 2500285 . - 0 ID=cds-UTX04081.1;Parent=gene-NM058_13030;Dbxref=NCBI_GP:UTX04081.1;Name=UTX04081.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389541.1;locus_tag=NM058_13030;product=ribosome maturation factor RimP;protein_id=UTX04081.1;transl_table=11 CP101611.1 Genbank gene 2500616 2504929 . - . ID=gene-NM058_13035;Name=NM058_13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13035 CP101611.1 Protein Homology CDS 2500616 2504929 . - 0 ID=cds-UTX04082.1;Parent=gene-NM058_13035;Dbxref=NCBI_GP:UTX04082.1;Name=UTX04082.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389540.1;locus_tag=NM058_13035;product=PolC-type DNA polymerase III;protein_id=UTX04082.1;transl_table=11 CP101611.1 Genbank gene 2505038 2506732 . - . ID=gene-NM058_13040;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=NM058_13040 CP101611.1 Protein Homology CDS 2505038 2506732 . - 0 ID=cds-UTX04083.1;Parent=gene-NM058_13040;Dbxref=NCBI_GP:UTX04083.1;Name=UTX04083.1;Ontology_term=GO:0006433,GO:0004827,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389539.1;locus_tag=NM058_13040;product=proline--tRNA ligase;protein_id=UTX04083.1;transl_table=11 CP101611.1 Genbank gene 2506765 2508033 . - . ID=gene-NM058_13045;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=NM058_13045 CP101611.1 Protein Homology CDS 2506765 2508033 . - 0 ID=cds-UTX04084.1;Parent=gene-NM058_13045;Dbxref=NCBI_GP:UTX04084.1;Name=UTX04084.1;Ontology_term=GO:0006508,GO:0004222,GO:0016021;gbkey=CDS;gene=rseP;go_component=integral component of membrane|0016021||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389538.1;locus_tag=NM058_13045;product=RIP metalloprotease RseP;protein_id=UTX04084.1;transl_table=11 CP101611.1 Genbank pseudogene 2508040 2509189 . - . ID=gene-NM058_13050;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=pseudogene;locus_tag=NM058_13050;pseudo=true CP101611.1 Protein Homology CDS 2508040 2509189 . - 0 ID=cds-NM058_13050;Parent=gene-NM058_13050;Note=frameshifted;Ontology_term=GO:0019288,GO:0030604,GO:0005737;gbkey=CDS;gene=dxr;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389537.2;locus_tag=NM058_13050;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2509251 2510057 . - . ID=gene-NM058_13055;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=NM058_13055 CP101611.1 Protein Homology CDS 2509251 2510057 . - 0 ID=cds-UTX04085.1;Parent=gene-NM058_13055;Dbxref=NCBI_GP:UTX04085.1;Name=UTX04085.1;gbkey=CDS;gene=cdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389536.1;locus_tag=NM058_13055;product=phosphatidate cytidylyltransferase;protein_id=UTX04085.1;transl_table=11 CP101611.1 Genbank gene 2510061 2510843 . - . ID=gene-NM058_13060;Name=NM058_13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13060 CP101611.1 Protein Homology CDS 2510061 2510843 . - 0 ID=cds-UTX04086.1;Parent=gene-NM058_13060;Dbxref=NCBI_GP:UTX04086.1;Name=UTX04086.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389535.1;locus_tag=NM058_13060;product=isoprenyl transferase;protein_id=UTX04086.1;transl_table=11 CP101611.1 Genbank gene 2510974 2511531 . - . ID=gene-NM058_13065;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=NM058_13065 CP101611.1 Protein Homology CDS 2510974 2511531 . - 0 ID=cds-UTX04087.1;Parent=gene-NM058_13065;Dbxref=NCBI_GP:UTX04087.1;Name=UTX04087.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389534.1;locus_tag=NM058_13065;product=ribosome recycling factor;protein_id=UTX04087.1;transl_table=11 CP101611.1 Genbank gene 2511533 2512255 . - . ID=gene-NM058_13070;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=NM058_13070 CP101611.1 Protein Homology CDS 2511533 2512255 . - 0 ID=cds-UTX04088.1;Parent=gene-NM058_13070;Dbxref=NCBI_GP:UTX04088.1;Name=UTX04088.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389533.2;locus_tag=NM058_13070;product=UMP kinase;protein_id=UTX04088.1;transl_table=11 CP101611.1 Genbank pseudogene 2512401 2513283 . - . ID=gene-NM058_13075;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=pseudogene;locus_tag=NM058_13075;pseudo=true CP101611.1 Protein Homology CDS 2512401 2513283 . - 0 ID=cds-NM058_13075;Parent=gene-NM058_13075;Note=frameshifted;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389532.1;locus_tag=NM058_13075;product=translation elongation factor Ts;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2513384 2514124 . - . ID=gene-NM058_13080;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=NM058_13080 CP101611.1 Protein Homology CDS 2513384 2514124 . - 0 ID=cds-UTX04089.1;Parent=gene-NM058_13080;Dbxref=NCBI_GP:UTX04089.1;Name=UTX04089.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389531.1;locus_tag=NM058_13080;product=30S ribosomal protein S2;protein_id=UTX04089.1;transl_table=11 CP101611.1 Genbank gene 2514268 2514771 . - . ID=gene-NM058_13085;Name=NM058_13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13085 CP101611.1 Protein Homology CDS 2514268 2514771 . - 0 ID=cds-UTX04090.1;Parent=gene-NM058_13085;Dbxref=NCBI_GP:UTX04090.1;Name=UTX04090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389530.1;locus_tag=NM058_13085;product=Swarming motility protein SwrB;protein_id=UTX04090.1;transl_table=11 CP101611.1 Genbank gene 2514800 2515564 . - . ID=gene-NM058_13090;Name=sigD;gbkey=Gene;gene=sigD;gene_biotype=protein_coding;locus_tag=NM058_13090 CP101611.1 Protein Homology CDS 2514800 2515564 . - 0 ID=cds-UTX04091.1;Parent=gene-NM058_13090;Dbxref=NCBI_GP:UTX04091.1;Name=UTX04091.1;gbkey=CDS;gene=sigD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389529.1;locus_tag=NM058_13090;product=RNA polymerase sigma-28 factor SigD;protein_id=UTX04091.1;transl_table=11 CP101611.1 Genbank gene 2515587 2516087 . - . ID=gene-NM058_13095;Name=cheD;gbkey=Gene;gene=cheD;gene_biotype=protein_coding;locus_tag=NM058_13095 CP101611.1 Protein Homology CDS 2515587 2516087 . - 0 ID=cds-UTX04092.1;Parent=gene-NM058_13095;Dbxref=NCBI_GP:UTX04092.1;Name=UTX04092.1;gbkey=CDS;gene=cheD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389528.1;locus_tag=NM058_13095;product=chemoreceptor glutamine deamidase CheD;protein_id=UTX04092.1;transl_table=11 CP101611.1 Genbank gene 2516084 2516713 . - . ID=gene-NM058_13100;Name=cheC;gbkey=Gene;gene=cheC;gene_biotype=protein_coding;locus_tag=NM058_13100 CP101611.1 Protein Homology CDS 2516084 2516713 . - 0 ID=cds-UTX04093.1;Parent=gene-NM058_13100;Dbxref=NCBI_GP:UTX04093.1;Name=UTX04093.1;gbkey=CDS;gene=cheC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389527.1;locus_tag=NM058_13100;product=CheY-P phosphatase CheC;protein_id=UTX04093.1;transl_table=11 CP101611.1 Genbank gene 2516732 2517202 . - . ID=gene-NM058_13105;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=NM058_13105 CP101611.1 Protein Homology CDS 2516732 2517202 . - 0 ID=cds-UTX04094.1;Parent=gene-NM058_13105;Dbxref=NCBI_GP:UTX04094.1;Name=UTX04094.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389526.1;locus_tag=NM058_13105;product=chemotaxis protein CheW;protein_id=UTX04094.1;transl_table=11 CP101611.1 Genbank gene 2517224 2519233 . - . ID=gene-NM058_13110;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=NM058_13110 CP101611.1 Protein Homology CDS 2517224 2519233 . - 0 ID=cds-UTX04095.1;Parent=gene-NM058_13110;Dbxref=NCBI_GP:UTX04095.1;Name=UTX04095.1;gbkey=CDS;gene=cheA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389525.2;locus_tag=NM058_13110;product=chemotaxis protein CheA;protein_id=UTX04095.1;transl_table=11 CP101611.1 Genbank gene 2519199 2520308 . - . ID=gene-NM058_13115;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=NM058_13115 CP101611.1 Protein Homology CDS 2519199 2520308 . - 0 ID=cds-UTX04096.1;Parent=gene-NM058_13115;Dbxref=NCBI_GP:UTX04096.1;Name=UTX04096.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389524.2;locus_tag=NM058_13115;product=protein-glutamate O-methylesterase CheB;protein_id=UTX04096.1;transl_table=11 CP101611.1 Genbank gene 2520310 2521206 . - . ID=gene-NM058_13120;Name=flhG;gbkey=Gene;gene=flhG;gene_biotype=protein_coding;locus_tag=NM058_13120 CP101611.1 Protein Homology CDS 2520310 2521206 . - 0 ID=cds-UTX04097.1;Parent=gene-NM058_13120;Dbxref=NCBI_GP:UTX04097.1;Name=UTX04097.1;gbkey=CDS;gene=flhG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389523.1;locus_tag=NM058_13120;product=flagellum location/number ATPase FlhG;protein_id=UTX04097.1;transl_table=11 CP101611.1 Genbank gene 2521197 2522297 . - . ID=gene-NM058_13125;Name=NM058_13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13125 CP101611.1 Protein Homology CDS 2521197 2522297 . - 0 ID=cds-UTX04098.1;Parent=gene-NM058_13125;Dbxref=NCBI_GP:UTX04098.1;Name=UTX04098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389522.1;locus_tag=NM058_13125;product=flagellar biosynthesis protein FlhF;protein_id=UTX04098.1;transl_table=11 CP101611.1 Genbank pseudogene 2522297 2524325 . - . ID=gene-NM058_13130;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=pseudogene;locus_tag=NM058_13130;pseudo=true CP101611.1 Protein Homology CDS 2522297 2524325 . - 0 ID=cds-NM058_13130;Parent=gene-NM058_13130;Note=frameshifted;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=flhA;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389521.2;locus_tag=NM058_13130;product=flagellar biosynthesis protein FlhA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2524358 2525440 . - . ID=gene-NM058_13135;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=NM058_13135 CP101611.1 Protein Homology CDS 2524358 2525440 . - 0 ID=cds-UTX04099.1;Parent=gene-NM058_13135;Dbxref=NCBI_GP:UTX04099.1;Name=UTX04099.1;Ontology_term=GO:0001539;gbkey=CDS;gene=flhB;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389520.1;locus_tag=NM058_13135;product=flagellar biosynthesis protein FlhB;protein_id=UTX04099.1;transl_table=11 CP101611.1 Genbank gene 2525440 2526219 . - . ID=gene-NM058_13140;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=NM058_13140 CP101611.1 Protein Homology CDS 2525440 2526219 . - 0 ID=cds-UTX04100.1;Parent=gene-NM058_13140;Dbxref=NCBI_GP:UTX04100.1;Name=UTX04100.1;Ontology_term=GO:0006605,GO:0044780,GO:0016021;gbkey=CDS;gene=fliR;go_component=integral component of membrane|0016021||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389519.2;locus_tag=NM058_13140;product=flagellar type III secretion system protein FliR;protein_id=UTX04100.1;transl_table=11 CP101611.1 Genbank gene 2526227 2526496 . - . ID=gene-NM058_13145;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=NM058_13145 CP101611.1 Protein Homology CDS 2526227 2526496 . - 0 ID=cds-UTX04101.1;Parent=gene-NM058_13145;Dbxref=NCBI_GP:UTX04101.1;Name=UTX04101.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliQ;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389518.1;locus_tag=NM058_13145;product=flagellar biosynthesis protein FliQ;protein_id=UTX04101.1;transl_table=11 CP101611.1 Genbank gene 2526511 2527176 . - . ID=gene-NM058_13150;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=NM058_13150 CP101611.1 Protein Homology CDS 2526511 2527176 . - 0 ID=cds-UTX04102.1;Parent=gene-NM058_13150;Dbxref=NCBI_GP:UTX04102.1;Name=UTX04102.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0001539;gbkey=CDS;gene=fliP;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389517.1;locus_tag=NM058_13150;product=flagellar type III secretion system pore protein FliP;protein_id=UTX04102.1;transl_table=11 CP101611.1 Genbank gene 2527169 2527828 . - . ID=gene-NM058_13155;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=NM058_13155 CP101611.1 Protein Homology CDS 2527169 2527828 . - 0 ID=cds-UTX04103.1;Parent=gene-NM058_13155;Dbxref=NCBI_GP:UTX04103.1;Name=UTX04103.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389516.1;locus_tag=NM058_13155;product=flagella biosynthesis regulatory protein FliZ;protein_id=UTX04103.1;transl_table=11 CP101611.1 Genbank gene 2527843 2528205 . - . ID=gene-NM058_13160;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=NM058_13160 CP101611.1 Protein Homology CDS 2527843 2528205 . - 0 ID=cds-UTX04104.1;Parent=gene-NM058_13160;Dbxref=NCBI_GP:UTX04104.1;Name=UTX04104.1;gbkey=CDS;gene=cheY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389515.1;locus_tag=NM058_13160;product=chemotaxis protein CheY;protein_id=UTX04104.1;transl_table=11 CP101611.1 Genbank gene 2528231 2529364 . - . ID=gene-NM058_13165;Name=fliY;gbkey=Gene;gene=fliY;gene_biotype=protein_coding;locus_tag=NM058_13165 CP101611.1 Protein Homology CDS 2528231 2529364 . - 0 ID=cds-UTX04105.1;Parent=gene-NM058_13165;Dbxref=NCBI_GP:UTX04105.1;Name=UTX04105.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009425,GO:0016020;gbkey=CDS;gene=fliY;go_component=bacterial-type flagellum basal body|0009425||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389514.1;locus_tag=NM058_13165;product=flagellar motor switch phosphatase FliY;protein_id=UTX04105.1;transl_table=11 CP101611.1 Genbank gene 2529354 2530352 . - . ID=gene-NM058_13170;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=NM058_13170 CP101611.1 Protein Homology CDS 2529354 2530352 . - 0 ID=cds-UTX04106.1;Parent=gene-NM058_13170;Dbxref=NCBI_GP:UTX04106.1;Name=UTX04106.1;Ontology_term=GO:0071973,GO:0003774,GO:0009425;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389513.1;locus_tag=NM058_13170;product=flagellar motor switch protein FliM;protein_id=UTX04106.1;transl_table=11 CP101611.1 Genbank gene 2530386 2530808 . - . ID=gene-NM058_13175;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=NM058_13175 CP101611.1 Protein Homology CDS 2530386 2530808 . - 0 ID=cds-UTX04107.1;Parent=gene-NM058_13175;Dbxref=NCBI_GP:UTX04107.1;Name=UTX04107.1;gbkey=CDS;gene=fliL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389512.1;locus_tag=NM058_13175;product=flagellar basal body-associated protein FliL;protein_id=UTX04107.1;transl_table=11 CP101611.1 Genbank gene 2530805 2531020 . - . ID=gene-NM058_13180;Name=swrD;gbkey=Gene;gene=swrD;gene_biotype=protein_coding;locus_tag=NM058_13180 CP101611.1 Protein Homology CDS 2530805 2531020 . - 0 ID=cds-UTX04108.1;Parent=gene-NM058_13180;Dbxref=NCBI_GP:UTX04108.1;Name=UTX04108.1;gbkey=CDS;gene=swrD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097728.1;locus_tag=NM058_13180;product=swarming motility protein SwrD;protein_id=UTX04108.1;transl_table=11 CP101611.1 Genbank gene 2531060 2531854 . - . ID=gene-NM058_13185;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=NM058_13185 CP101611.1 Protein Homology CDS 2531060 2531854 . - 0 ID=cds-UTX04109.1;Parent=gene-NM058_13185;Dbxref=NCBI_GP:UTX04109.1;Name=UTX04109.1;gbkey=CDS;gene=flgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389511.2;locus_tag=NM058_13185;product=flagellar basal body rod protein FlgG;protein_id=UTX04109.1;transl_table=11 CP101611.1 Genbank gene 2531875 2532297 . - . ID=gene-NM058_13190;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=NM058_13190 CP101611.1 Protein Homology CDS 2531875 2532297 . - 0 ID=cds-UTX04110.1;Parent=gene-NM058_13190;Dbxref=NCBI_GP:UTX04110.1;Name=UTX04110.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389510.1;locus_tag=NM058_13190;product=flagellar hook assembly protein FlgD;protein_id=UTX04110.1;transl_table=11 CP101611.1 Genbank gene 2532294 2533751 . - . ID=gene-NM058_13195;Name=NM058_13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13195 CP101611.1 Protein Homology CDS 2532294 2533751 . - 0 ID=cds-UTX04111.1;Parent=gene-NM058_13195;Dbxref=NCBI_GP:UTX04111.1;Name=UTX04111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389509.2;locus_tag=NM058_13195;product=flagellar hook-length control protein FliK;protein_id=UTX04111.1;transl_table=11 CP101611.1 Genbank gene 2533764 2534378 . - . ID=gene-NM058_13200;Name=NM058_13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13200 CP101611.1 Protein Homology CDS 2533764 2534378 . - 0 ID=cds-UTX04112.1;Parent=gene-NM058_13200;Dbxref=NCBI_GP:UTX04112.1;Name=UTX04112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389508.2;locus_tag=NM058_13200;product=MotE family protein;protein_id=UTX04112.1;transl_table=11 CP101611.1 Genbank gene 2534390 2534833 . - . ID=gene-NM058_13205;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=NM058_13205 CP101611.1 Protein Homology CDS 2534390 2534833 . - 0 ID=cds-UTX04113.1;Parent=gene-NM058_13205;Dbxref=NCBI_GP:UTX04113.1;Name=UTX04113.1;gbkey=CDS;gene=fliJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389507.1;locus_tag=NM058_13205;product=flagellar biosynthesis chaperone FliJ;protein_id=UTX04113.1;transl_table=11 CP101611.1 Genbank gene 2534836 2536152 . - . ID=gene-NM058_13210;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=NM058_13210 CP101611.1 Protein Homology CDS 2534836 2536152 . - 0 ID=cds-UTX04114.1;Parent=gene-NM058_13210;Dbxref=NCBI_GP:UTX04114.1;Name=UTX04114.1;Ontology_term=GO:0030254,GO:0044780,GO:0046034,GO:0071973,GO:1902600,GO:0005524,GO:0016887,GO:0030257;gbkey=CDS;gene=fliI;go_component=type III protein secretion system complex|0030257||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA,bacterial-type flagellum assembly|0044780||IEA,ATP metabolic process|0046034||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389506.2;locus_tag=NM058_13210;product=flagellar protein export ATPase FliI;protein_id=UTX04114.1;transl_table=11 CP101611.1 Genbank gene 2536149 2536901 . - . ID=gene-NM058_13215;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=NM058_13215 CP101611.1 Protein Homology CDS 2536149 2536901 . - 0 ID=cds-UTX04115.1;Parent=gene-NM058_13215;Dbxref=NCBI_GP:UTX04115.1;Name=UTX04115.1;gbkey=CDS;gene=fliH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014479782.1;locus_tag=NM058_13215;product=flagellar assembly protein FliH;protein_id=UTX04115.1;transl_table=11 CP101611.1 Genbank pseudogene 2536894 2537908 . - . ID=gene-NM058_13220;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=pseudogene;locus_tag=NM058_13220;pseudo=true CP101611.1 Protein Homology CDS 2536894 2537908 . - 0 ID=cds-NM058_13220;Parent=gene-NM058_13220;Note=frameshifted;Ontology_term=GO:0001539,GO:0006935,GO:0005198,GO:0009433;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum basal body%2C C ring|0009433||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389504.1;locus_tag=NM058_13220;product=flagellar motor switch protein FliG;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2537921 2539531 . - . ID=gene-NM058_13225;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=NM058_13225 CP101611.1 Protein Homology CDS 2537921 2539531 . - 0 ID=cds-UTX04116.1;Parent=gene-NM058_13225;Dbxref=NCBI_GP:UTX04116.1;Name=UTX04116.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389503.1;locus_tag=NM058_13225;product=flagellar M-ring protein FliF;protein_id=UTX04116.1;transl_table=11 CP101611.1 Genbank gene 2539577 2539897 . - . ID=gene-NM058_13230;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=NM058_13230 CP101611.1 Protein Homology CDS 2539577 2539897 . - 0 ID=cds-UTX04117.1;Parent=gene-NM058_13230;Dbxref=NCBI_GP:UTX04117.1;Name=UTX04117.1;Ontology_term=GO:0001539,GO:0005198;gbkey=CDS;gene=fliE;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389502.1;locus_tag=NM058_13230;product=flagellar hook-basal body complex protein FliE;protein_id=UTX04117.1;transl_table=11 CP101611.1 Genbank gene 2539909 2540361 . - . ID=gene-NM058_13235;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=NM058_13235 CP101611.1 Protein Homology CDS 2539909 2540361 . - 0 ID=cds-UTX07048.1;Parent=gene-NM058_13235;Dbxref=NCBI_GP:UTX07048.1;Name=UTX07048.1;Ontology_term=GO:0001539,GO:0005198,GO:0009425;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389501.1;locus_tag=NM058_13235;product=flagellar basal body rod protein FlgC;protein_id=UTX07048.1;transl_table=11 CP101611.1 Genbank gene 2540361 2540750 . - . ID=gene-NM058_13240;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=NM058_13240 CP101611.1 Protein Homology CDS 2540361 2540750 . - 0 ID=cds-UTX04118.1;Parent=gene-NM058_13240;Dbxref=NCBI_GP:UTX04118.1;Name=UTX04118.1;Ontology_term=GO:0001539,GO:0005198,GO:0009429;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C proximal rod|0009429||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389500.1;locus_tag=NM058_13240;product=flagellar basal body rod protein FlgB;protein_id=UTX04118.1;transl_table=11 CP101611.1 Genbank gene 2541132 2541911 . - . ID=gene-NM058_13245;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=NM058_13245 CP101611.1 Protein Homology CDS 2541132 2541911 . - 0 ID=cds-UTX04119.1;Parent=gene-NM058_13245;Dbxref=NCBI_GP:UTX04119.1;Name=UTX04119.1;gbkey=CDS;gene=codY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389499.1;locus_tag=NM058_13245;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=UTX04119.1;transl_table=11 CP101611.1 Genbank pseudogene 2541951 2543352 . - . ID=gene-NM058_13250;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=pseudogene;locus_tag=NM058_13250;pseudo=true CP101611.1 Protein Homology CDS 2541951 2543352 . - 0 ID=cds-NM058_13250;Parent=gene-NM058_13250;Note=frameshifted;Ontology_term=GO:0006508,GO:0004176,GO:0005524;gbkey=CDS;gene=hslU;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389498.1;locus_tag=NM058_13250;product=HslU--HslV peptidase ATPase subunit;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2543369 2543913 . - . ID=gene-NM058_13255;Name=clpQ;gbkey=Gene;gene=clpQ;gene_biotype=pseudogene;gene_synonym=codW;locus_tag=NM058_13255;pseudo=true CP101611.1 Protein Homology CDS 2543369 2543913 . - 0 ID=cds-NM058_13255;Parent=gene-NM058_13255;Note=frameshifted;gbkey=CDS;gene=clpQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389497.1;locus_tag=NM058_13255;product=ATP-dependent protease subunit ClpQ;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2543926 2544840 . - . ID=gene-NM058_13260;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=NM058_13260 CP101611.1 Protein Homology CDS 2543926 2544840 . - 0 ID=cds-UTX04120.1;Parent=gene-NM058_13260;Dbxref=NCBI_GP:UTX04120.1;Name=UTX04120.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389496.1;locus_tag=NM058_13260;product=tyrosine recombinase XerC;protein_id=UTX04120.1;transl_table=11 CP101611.1 Genbank gene 2544908 2546215 . - . ID=gene-NM058_13265;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=NM058_13265 CP101611.1 Protein Homology CDS 2544908 2546215 . - 0 ID=cds-UTX04121.1;Parent=gene-NM058_13265;Dbxref=NCBI_GP:UTX04121.1;Name=UTX04121.1;Ontology_term=GO:0008033,GO:0047151,GO:0050660;gbkey=CDS;gene=trmFO;go_function=methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity|0047151||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389495.1;locus_tag=NM058_13265;product=FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO;protein_id=UTX04121.1;transl_table=11 CP101611.1 Genbank pseudogene 2546291 2548365 . - . ID=gene-NM058_13270;Name=topA;gbkey=Gene;gene=topA;gene_biotype=pseudogene;locus_tag=NM058_13270;pseudo=true CP101611.1 Protein Homology CDS 2546291 2548365 . - 0 ID=cds-NM058_13270;Parent=gene-NM058_13270;Note=frameshifted;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389494.1;locus_tag=NM058_13270;product=type I DNA topoisomerase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2548550 2549443 . - . ID=gene-NM058_13275;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=NM058_13275 CP101611.1 Protein Homology CDS 2548550 2549443 . - 0 ID=cds-UTX04122.1;Parent=gene-NM058_13275;Dbxref=NCBI_GP:UTX04122.1;Name=UTX04122.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389493.1;locus_tag=NM058_13275;product=DNA-processing protein DprA;protein_id=UTX04122.1;transl_table=11 CP101611.1 Genbank gene 2549503 2550405 . - . ID=gene-NM058_13280;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=NM058_13280 CP101611.1 Protein Homology CDS 2549503 2550405 . - 0 ID=cds-UTX04123.1;Parent=gene-NM058_13280;Dbxref=NCBI_GP:UTX04123.1;Name=UTX04123.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389492.1;locus_tag=NM058_13280;product=succinate--CoA ligase subunit alpha;protein_id=UTX04123.1;transl_table=11 CP101611.1 Genbank pseudogene 2550434 2551592 . - . ID=gene-NM058_13285;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=pseudogene;locus_tag=NM058_13285;pseudo=true CP101611.1 Protein Homology CDS 2550434 2551592 . - 0 ID=cds-NM058_13285;Parent=gene-NM058_13285;Note=frameshifted;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389491.1;locus_tag=NM058_13285;product=ADP-forming succinate--CoA ligase subunit beta;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2551766 2552047 . - . ID=gene-NM058_13290;Name=NM058_13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13290 CP101611.1 Protein Homology CDS 2551766 2552047 . - 0 ID=cds-UTX04124.1;Parent=gene-NM058_13290;Dbxref=NCBI_GP:UTX04124.1;Name=UTX04124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389490.1;locus_tag=NM058_13290;product=FlhB-like flagellar biosynthesis protein;protein_id=UTX04124.1;transl_table=11 CP101611.1 Genbank pseudogene 2552044 2553774 . - . ID=gene-NM058_13295;Name=NM058_13295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_13295;pseudo=true CP101611.1 Protein Homology CDS 2552044 2553774 . - 0 ID=cds-NM058_13295;Parent=gene-NM058_13295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389489.1;locus_tag=NM058_13295;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2553804 2554571 . - . ID=gene-NM058_13300;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=NM058_13300 CP101611.1 Protein Homology CDS 2553804 2554571 . - 0 ID=cds-UTX04125.1;Parent=gene-NM058_13300;Dbxref=NCBI_GP:UTX04125.1;Name=UTX04125.1;gbkey=CDS;gene=rnhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389488.1;locus_tag=NM058_13300;product=ribonuclease HII;protein_id=UTX04125.1;transl_table=11 CP101611.1 Genbank gene 2554642 2555490 . - . ID=gene-NM058_13305;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=NM058_13305 CP101611.1 Protein Homology CDS 2554642 2555490 . - 0 ID=cds-UTX04126.1;Parent=gene-NM058_13305;Dbxref=NCBI_GP:UTX04126.1;Name=UTX04126.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389487.1;locus_tag=NM058_13305;product=ribosome biogenesis GTPase YlqF;protein_id=UTX04126.1;transl_table=11 CP101611.1 Genbank gene 2555635 2555982 . - . ID=gene-NM058_13310;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=NM058_13310 CP101611.1 Protein Homology CDS 2555635 2555982 . - 0 ID=cds-UTX04127.1;Parent=gene-NM058_13310;Dbxref=NCBI_GP:UTX04127.1;Name=UTX04127.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389486.2;locus_tag=NM058_13310;product=50S ribosomal protein L19;protein_id=UTX04127.1;transl_table=11 CP101611.1 Genbank gene 2556122 2556853 . - . ID=gene-NM058_13315;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=NM058_13315 CP101611.1 Protein Homology CDS 2556122 2556853 . - 0 ID=cds-UTX04128.1;Parent=gene-NM058_13315;Dbxref=NCBI_GP:UTX04128.1;Name=UTX04128.1;Ontology_term=GO:0006400,GO:0009019;gbkey=CDS;gene=trmD;go_function=tRNA (guanine-N1-)-methyltransferase activity|0009019||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389485.1;locus_tag=NM058_13315;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=UTX04128.1;transl_table=11 CP101611.1 Genbank gene 2556850 2557374 . - . ID=gene-NM058_13320;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=NM058_13320 CP101611.1 Protein Homology CDS 2556850 2557374 . - 0 ID=cds-UTX04129.1;Parent=gene-NM058_13320;Dbxref=NCBI_GP:UTX04129.1;Name=UTX04129.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389484.1;locus_tag=NM058_13320;product=ribosome maturation factor RimM;protein_id=UTX04129.1;transl_table=11 CP101611.1 Genbank gene 2557379 2557765 . - . ID=gene-NM058_13325;Name=NM058_13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13325 CP101611.1 Protein Homology CDS 2557379 2557765 . - 0 ID=cds-UTX04130.1;Parent=gene-NM058_13325;Dbxref=NCBI_GP:UTX04130.1;Name=UTX04130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389483.1;locus_tag=NM058_13325;product=YlqD family protein;protein_id=UTX04130.1;transl_table=11 CP101611.1 Genbank gene 2557886 2558131 . - . ID=gene-NM058_13330;Name=NM058_13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13330 CP101611.1 Protein Homology CDS 2557886 2558131 . - 0 ID=cds-UTX04131.1;Parent=gene-NM058_13330;Dbxref=NCBI_GP:UTX04131.1;Name=UTX04131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389482.1;locus_tag=NM058_13330;product=KH domain-containing protein;protein_id=UTX04131.1;transl_table=11 CP101611.1 Genbank gene 2558131 2558403 . - . ID=gene-NM058_13335;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=NM058_13335 CP101611.1 Protein Homology CDS 2558131 2558403 . - 0 ID=cds-UTX04132.1;Parent=gene-NM058_13335;Dbxref=NCBI_GP:UTX04132.1;Name=UTX04132.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012094939.1;locus_tag=NM058_13335;product=30S ribosomal protein S16;protein_id=UTX04132.1;transl_table=11 CP101611.1 Genbank gene 2558509 2559849 . - . ID=gene-NM058_13340;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=NM058_13340 CP101611.1 Protein Homology CDS 2558509 2559849 . - 0 ID=cds-UTX04133.1;Parent=gene-NM058_13340;Dbxref=NCBI_GP:UTX04133.1;Name=UTX04133.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389480.1;locus_tag=NM058_13340;product=signal recognition particle protein;protein_id=UTX04133.1;transl_table=11 CP101611.1 Genbank gene 2559863 2560195 . - . ID=gene-NM058_13345;Name=NM058_13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13345 CP101611.1 Protein Homology CDS 2559863 2560195 . - 0 ID=cds-UTX04134.1;Parent=gene-NM058_13345;Dbxref=NCBI_GP:UTX04134.1;Name=UTX04134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389479.1;locus_tag=NM058_13345;product=putative DNA-binding protein;protein_id=UTX04134.1;transl_table=11 CP101611.1 Genbank gene 2560375 2560860 . + . ID=gene-NM058_13350;Name=NM058_13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13350 CP101611.1 Protein Homology CDS 2560375 2560860 . + 0 ID=cds-UTX04135.1;Parent=gene-NM058_13350;Dbxref=NCBI_GP:UTX04135.1;Name=UTX04135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389478.1;locus_tag=NM058_13350;product=Ig-like domain-containing protein;protein_id=UTX04135.1;transl_table=11 CP101611.1 Genbank gene 2560897 2561886 . - . ID=gene-NM058_13355;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=NM058_13355 CP101611.1 Protein Homology CDS 2560897 2561886 . - 0 ID=cds-UTX04136.1;Parent=gene-NM058_13355;Dbxref=NCBI_GP:UTX04136.1;Name=UTX04136.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389477.1;locus_tag=NM058_13355;product=signal recognition particle-docking protein FtsY;protein_id=UTX04136.1;transl_table=11 CP101611.1 Genbank gene 2561906 2565466 . - . ID=gene-NM058_13360;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=NM058_13360 CP101611.1 Protein Homology CDS 2561906 2565466 . - 0 ID=cds-UTX04137.1;Parent=gene-NM058_13360;Dbxref=NCBI_GP:UTX04137.1;Name=UTX04137.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389476.2;locus_tag=NM058_13360;product=chromosome segregation protein SMC;protein_id=UTX04137.1;transl_table=11 CP101611.1 Genbank gene 2565567 2566316 . - . ID=gene-NM058_13365;Name=rncS;gbkey=Gene;gene=rncS;gene_biotype=protein_coding;locus_tag=NM058_13365 CP101611.1 Protein Homology CDS 2565567 2566316 . - 0 ID=cds-UTX04138.1;Parent=gene-NM058_13365;Dbxref=NCBI_GP:UTX04138.1;Name=UTX04138.1;gbkey=CDS;gene=rncS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389475.1;locus_tag=NM058_13365;product=ribonuclease III;protein_id=UTX04138.1;transl_table=11 CP101611.1 Genbank gene 2566456 2566689 . - . ID=gene-NM058_13370;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=NM058_13370 CP101611.1 Protein Homology CDS 2566456 2566689 . - 0 ID=cds-UTX04139.1;Parent=gene-NM058_13370;Dbxref=NCBI_GP:UTX04139.1;Name=UTX04139.1;Ontology_term=GO:0006633,GO:0000036;gbkey=CDS;gene=acpP;go_function=acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389474.1;locus_tag=NM058_13370;product=acyl carrier protein;protein_id=UTX04139.1;transl_table=11 CP101611.1 Genbank gene 2566773 2567513 . - . ID=gene-NM058_13375;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=NM058_13375 CP101611.1 Protein Homology CDS 2566773 2567513 . - 0 ID=cds-UTX04140.1;Parent=gene-NM058_13375;Dbxref=NCBI_GP:UTX04140.1;Name=UTX04140.1;Ontology_term=GO:0006633,GO:0004316;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389473.1;locus_tag=NM058_13375;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=UTX04140.1;transl_table=11 CP101611.1 Genbank gene 2567506 2568459 . - . ID=gene-NM058_13380;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=NM058_13380 CP101611.1 Protein Homology CDS 2567506 2568459 . - 0 ID=cds-UTX04141.1;Parent=gene-NM058_13380;Dbxref=NCBI_GP:UTX04141.1;Name=UTX04141.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389472.1;locus_tag=NM058_13380;product=ACP S-malonyltransferase;protein_id=UTX04141.1;transl_table=11 CP101611.1 Genbank gene 2568478 2569479 . - . ID=gene-NM058_13385;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=NM058_13385 CP101611.1 Protein Homology CDS 2568478 2569479 . - 0 ID=cds-UTX04142.1;Parent=gene-NM058_13385;Dbxref=NCBI_GP:UTX04142.1;Name=UTX04142.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389471.1;locus_tag=NM058_13385;product=phosphate acyltransferase PlsX;protein_id=UTX04142.1;transl_table=11 CP101611.1 Genbank gene 2569493 2570059 . - . ID=gene-NM058_13390;Name=fapR;gbkey=Gene;gene=fapR;gene_biotype=protein_coding;locus_tag=NM058_13390 CP101611.1 Protein Homology CDS 2569493 2570059 . - 0 ID=cds-UTX04143.1;Parent=gene-NM058_13390;Dbxref=NCBI_GP:UTX04143.1;Name=UTX04143.1;Ontology_term=GO:0045717,GO:0045892,GO:0003700;gbkey=CDS;gene=fapR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of fatty acid biosynthetic process|0045717||IEA,negative regulation of transcription%2C DNA-templated|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389470.1;locus_tag=NM058_13390;product=transcription factor FapR;protein_id=UTX04143.1;transl_table=11 CP101611.1 Genbank gene 2570168 2572216 . - . ID=gene-NM058_13395;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=NM058_13395 CP101611.1 Protein Homology CDS 2570168 2572216 . - 0 ID=cds-UTX04144.1;Parent=gene-NM058_13395;Dbxref=NCBI_GP:UTX04144.1;Name=UTX04144.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389469.1;locus_tag=NM058_13395;product=ATP-dependent DNA helicase RecG;protein_id=UTX04144.1;transl_table=11 CP101611.1 Genbank gene 2572194 2573096 . - . ID=gene-NM058_13400;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=NM058_13400 CP101611.1 Protein Homology CDS 2572194 2573096 . - 0 ID=cds-UTX04145.1;Parent=gene-NM058_13400;Dbxref=NCBI_GP:UTX04145.1;Name=UTX04145.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389468.1;locus_tag=NM058_13400;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=UTX04145.1;transl_table=11 CP101611.1 Genbank gene 2573120 2573782 . - . ID=gene-NM058_13405;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=NM058_13405 CP101611.1 Protein Homology CDS 2573120 2573782 . - 0 ID=cds-UTX04146.1;Parent=gene-NM058_13405;Dbxref=NCBI_GP:UTX04146.1;Name=UTX04146.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389467.1;locus_tag=NM058_13405;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=UTX04146.1;transl_table=11 CP101611.1 Genbank gene 2573921 2575582 . - . ID=gene-NM058_13410;Name=NM058_13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13410 CP101611.1 Protein Homology CDS 2573921 2575582 . - 0 ID=cds-UTX04147.1;Parent=gene-NM058_13410;Dbxref=NCBI_GP:UTX04147.1;Name=UTX04147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389466.1;locus_tag=NM058_13410;product=DAK2 domain-containing protein;protein_id=UTX04147.1;transl_table=11 CP101611.1 Genbank gene 2575598 2575960 . - . ID=gene-NM058_13415;Name=NM058_13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13415 CP101611.1 Protein Homology CDS 2575598 2575960 . - 0 ID=cds-UTX04148.1;Parent=gene-NM058_13415;Dbxref=NCBI_GP:UTX04148.1;Name=UTX04148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389465.1;locus_tag=NM058_13415;product=Asp23/Gls24 family envelope stress response protein;protein_id=UTX04148.1;transl_table=11 CP101611.1 Genbank gene 2576239 2576427 . + . ID=gene-NM058_13420;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=NM058_13420 CP101611.1 Protein Homology CDS 2576239 2576427 . + 0 ID=cds-UTX04149.1;Parent=gene-NM058_13420;Dbxref=NCBI_GP:UTX04149.1;Name=UTX04149.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389464.1;locus_tag=NM058_13420;product=50S ribosomal protein L28;protein_id=UTX04149.1;transl_table=11 CP101611.1 Genbank gene 2576500 2576580 . - . ID=gene-NM058_13425;Name=spoVM;gbkey=Gene;gene=spoVM;gene_biotype=protein_coding;locus_tag=NM058_13425 CP101611.1 Protein Homology CDS 2576500 2576580 . - 0 ID=cds-UTX07049.1;Parent=gene-NM058_13425;Dbxref=NCBI_GP:UTX07049.1;Name=UTX07049.1;gbkey=CDS;gene=spoVM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389463.1;locus_tag=NM058_13425;product=stage V sporulation protein SpoVM;protein_id=UTX07049.1;transl_table=11 CP101611.1 Genbank pseudogene 2576650 2577293 . - . ID=gene-NM058_13430;Name=NM058_13430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_13430;pseudo=true CP101611.1 Protein Homology CDS 2576650 2577293 . - 0 ID=cds-NM058_13430;Parent=gene-NM058_13430;Note=frameshifted;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389462.1;locus_tag=NM058_13430;product=thiamine diphosphokinase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2577364 2578017 . - . ID=gene-NM058_13435;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=NM058_13435 CP101611.1 Protein Homology CDS 2577364 2578017 . - 0 ID=cds-UTX04150.1;Parent=gene-NM058_13435;Dbxref=NCBI_GP:UTX04150.1;Name=UTX04150.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389461.1;locus_tag=NM058_13435;product=ribulose-phosphate 3-epimerase;protein_id=UTX04150.1;transl_table=11 CP101611.1 Genbank gene 2578022 2578918 . - . ID=gene-NM058_13440;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=NM058_13440 CP101611.1 Protein Homology CDS 2578022 2578918 . - 0 ID=cds-UTX04151.1;Parent=gene-NM058_13440;Dbxref=NCBI_GP:UTX04151.1;Name=UTX04151.1;Ontology_term=GO:0006412,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389460.1;locus_tag=NM058_13440;product=ribosome small subunit-dependent GTPase A;protein_id=UTX04151.1;transl_table=11 CP101611.1 Genbank pseudogene 2578933 2580877 . - . ID=gene-NM058_13445;Name=prkC;gbkey=Gene;gene=prkC;gene_biotype=pseudogene;locus_tag=NM058_13445;pseudo=true CP101611.1 Protein Homology CDS 2578933 2580877 . - 0 ID=cds-NM058_13445;Parent=gene-NM058_13445;Note=frameshifted;gbkey=CDS;gene=prkC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389459.1;locus_tag=NM058_13445;product=serine/threonine protein kinase PrkC;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2580871 2581635 . - . ID=gene-NM058_13450;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=NM058_13450 CP101611.1 Protein Homology CDS 2580871 2581635 . - 0 ID=cds-UTX04152.1;Parent=gene-NM058_13450;Dbxref=NCBI_GP:UTX04152.1;Name=UTX04152.1;gbkey=CDS;gene=prpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389458.1;locus_tag=NM058_13450;product=protein-serine/threonine phosphatase PrpC;protein_id=UTX04152.1;transl_table=11 CP101611.1 Genbank pseudogene 2581642 2582732 . - . ID=gene-NM058_13455;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=pseudogene;locus_tag=NM058_13455;pseudo=true CP101611.1 Protein Homology CDS 2581642 2582732 . - 0 ID=cds-NM058_13455;Parent=gene-NM058_13455;Note=frameshifted;Ontology_term=GO:0031167,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389457.1;locus_tag=NM058_13455;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2582736 2584079 . - . ID=gene-NM058_13460;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=NM058_13460 CP101611.1 Protein Homology CDS 2582736 2584079 . - 0 ID=cds-UTX04153.1;Parent=gene-NM058_13460;Dbxref=NCBI_GP:UTX04153.1;Name=UTX04153.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmB;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389456.1;locus_tag=NM058_13460;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=UTX04153.1;transl_table=11 CP101611.1 Genbank pseudogene 2584066 2585017 . - . ID=gene-NM058_13465;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=pseudogene;locus_tag=NM058_13465;pseudo=true CP101611.1 Protein Homology CDS 2584066 2585017 . - 0 ID=cds-NM058_13465;Parent=gene-NM058_13465;Note=frameshifted;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013307976.1;locus_tag=NM058_13465;product=methionyl-tRNA formyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2585022 2585504 . - . ID=gene-NM058_13470;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=NM058_13470 CP101611.1 Protein Homology CDS 2585022 2585504 . - 0 ID=cds-UTX04154.1;Parent=gene-NM058_13470;Dbxref=NCBI_GP:UTX04154.1;Name=UTX04154.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389454.1;locus_tag=NM058_13470;product=peptide deformylase;protein_id=UTX04154.1;transl_table=11 CP101611.1 Genbank gene 2585531 2587948 . - . ID=gene-NM058_13475;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=NM058_13475 CP101611.1 Protein Homology CDS 2585531 2587948 . - 0 ID=cds-UTX04155.1;Parent=gene-NM058_13475;Dbxref=NCBI_GP:UTX04155.1;Name=UTX04155.1;Ontology_term=GO:0006260,GO:0032508,GO:0003678;gbkey=CDS;gene=priA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389453.1;locus_tag=NM058_13475;product=primosomal protein N';protein_id=UTX04155.1;transl_table=11 CP101611.1 Genbank gene 2587945 2589165 . - . ID=gene-NM058_13480;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=NM058_13480 CP101611.1 Protein Homology CDS 2587945 2589165 . - 0 ID=cds-UTX04156.1;Parent=gene-NM058_13480;Dbxref=NCBI_GP:UTX04156.1;Name=UTX04156.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258367.1;locus_tag=NM058_13480;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=UTX04156.1;transl_table=11 CP101611.1 Genbank gene 2589247 2589450 . - . ID=gene-NM058_13485;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=NM058_13485 CP101611.1 Protein Homology CDS 2589247 2589450 . - 0 ID=cds-UTX04157.1;Parent=gene-NM058_13485;Dbxref=NCBI_GP:UTX04157.1;Name=UTX04157.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389451.1;locus_tag=NM058_13485;product=DNA-directed RNA polymerase subunit omega;protein_id=UTX04157.1;transl_table=11 CP101611.1 Genbank gene 2589454 2590068 . - . ID=gene-NM058_13490;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=NM058_13490 CP101611.1 Protein Homology CDS 2589454 2590068 . - 0 ID=cds-UTX07050.1;Parent=gene-NM058_13490;Dbxref=NCBI_GP:UTX07050.1;Name=UTX07050.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389450.2;locus_tag=NM058_13490;product=guanylate kinase;protein_id=UTX07050.1;transl_table=11 CP101611.1 Genbank gene 2590076 2590345 . - . ID=gene-NM058_13495;Name=remA;gbkey=Gene;gene=remA;gene_biotype=protein_coding;locus_tag=NM058_13495 CP101611.1 Protein Homology CDS 2590076 2590345 . - 0 ID=cds-UTX04158.1;Parent=gene-NM058_13495;Dbxref=NCBI_GP:UTX04158.1;Name=UTX04158.1;gbkey=CDS;gene=remA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_570902.1;locus_tag=NM058_13495;product=extracellular matrix/biofilm regulator RemA;protein_id=UTX04158.1;transl_table=11 CP101611.1 Genbank pseudogene 2590422 2591296 . - . ID=gene-NM058_13500;Name=NM058_13500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_13500;pseudo=true CP101611.1 Protein Homology CDS 2590422 2591296 . - 0 ID=cds-NM058_13500;Parent=gene-NM058_13500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389449.1;locus_tag=NM058_13500;product=YicC family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2591378 2594050 . - . ID=gene-NM058_13505;Name=NM058_13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13505 CP101611.1 Protein Homology CDS 2591378 2594050 . - 0 ID=cds-UTX04159.1;Parent=gene-NM058_13505;Dbxref=NCBI_GP:UTX04159.1;Name=UTX04159.1;Ontology_term=GO:0006816,GO:0000166,GO:0005388,GO:0005524,GO:0016887,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=nucleotide binding|0000166||IEA,P-type calcium transporter activity|0005388||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=calcium ion transport|0006816||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389448.1;locus_tag=NM058_13505;product=calcium-translocating P-type ATPase%2C SERCA-type;protein_id=UTX04159.1;transl_table=11 CP101611.1 Genbank pseudogene 2594172 2595881 . + . ID=gene-NM058_13510;Name=NM058_13510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_13510;pseudo=true CP101611.1 Protein Homology CDS 2594172 2595881 . + 0 ID=cds-NM058_13510;Parent=gene-NM058_13510;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003232089.1;locus_tag=NM058_13510;product=NFACT family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2595922 2596410 . - . ID=gene-NM058_13515;Name=sirC;gbkey=Gene;gene=sirC;gene_biotype=protein_coding;locus_tag=NM058_13515 CP101611.1 Protein Homology CDS 2595922 2596410 . - 0 ID=cds-UTX07051.1;Parent=gene-NM058_13515;Dbxref=NCBI_GP:UTX07051.1;Name=UTX07051.1;Ontology_term=GO:0009236,GO:0019354,GO:0043115;gbkey=CDS;gene=sirC;go_function=precorrin-2 dehydrogenase activity|0043115||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389446.1;locus_tag=NM058_13515;product=precorrin-2 dehydrogenase;protein_id=UTX07051.1;transl_table=11 CP101611.1 Genbank pseudogene 2596391 2597175 . - . ID=gene-NM058_13520;Name=sirB;gbkey=Gene;gene=sirB;gene_biotype=pseudogene;locus_tag=NM058_13520;pseudo=true CP101611.1 Protein Homology CDS 2596391 2597175 . - 0 ID=cds-NM058_13520;Parent=gene-NM058_13520;Note=frameshifted;Ontology_term=GO:0019354,GO:0051266;gbkey=CDS;gene=sirB;go_function=sirohydrochlorin ferrochelatase activity|0051266||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389445.1;locus_tag=NM058_13520;product=sirohydrochlorin chelatase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2597177 2597948 . - . ID=gene-NM058_13525;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=pseudogene;locus_tag=NM058_13525;pseudo=true CP101611.1 Protein Homology CDS 2597177 2597948 . - 0 ID=cds-NM058_13525;Parent=gene-NM058_13525;Note=frameshifted;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389444.1;locus_tag=NM058_13525;product=uroporphyrinogen-III C-methyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2598047 2598639 . - . ID=gene-NM058_13530;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=pseudogene;locus_tag=NM058_13530;pseudo=true CP101611.1 Protein Homology CDS 2598047 2598639 . - 0 ID=cds-NM058_13530;Parent=gene-NM058_13530;Note=frameshifted;Ontology_term=GO:0006790,GO:0004020;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389443.1;locus_tag=NM058_13530;product=adenylyl-sulfate kinase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2598636 2599799 . - . ID=gene-NM058_13535;Name=sat;gbkey=Gene;gene=sat;gene_biotype=protein_coding;locus_tag=NM058_13535 CP101611.1 Protein Homology CDS 2598636 2599799 . - 0 ID=cds-UTX04160.1;Parent=gene-NM058_13535;Dbxref=NCBI_GP:UTX04160.1;Name=UTX04160.1;Ontology_term=GO:0004781;gbkey=CDS;gene=sat;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010285883.1;locus_tag=NM058_13535;product=sulfate adenylyltransferase;protein_id=UTX04160.1;transl_table=11 CP101611.1 Genbank gene 2599848 2600912 . - . ID=gene-NM058_13540;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=NM058_13540 CP101611.1 Protein Homology CDS 2599848 2600912 . - 0 ID=cds-UTX04161.1;Parent=gene-NM058_13540;Dbxref=NCBI_GP:UTX04161.1;Name=UTX04161.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389441.1;locus_tag=NM058_13540;product=sulfate permease;protein_id=UTX04161.1;transl_table=11 CP101611.1 Genbank gene 2600924 2601625 . - . ID=gene-NM058_13545;Name=NM058_13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13545 CP101611.1 Protein Homology CDS 2600924 2601625 . - 0 ID=cds-UTX04162.1;Parent=gene-NM058_13545;Dbxref=NCBI_GP:UTX04162.1;Name=UTX04162.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389440.1;locus_tag=NM058_13545;product=phosphoadenylyl-sulfate reductase;protein_id=UTX04162.1;transl_table=11 CP101611.1 cmsearch riboswitch 2601788 2601893 . - . ID=id-CP101611.1:2601788..2601893;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 2602038 2602685 . - . ID=gene-NM058_13550;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=NM058_13550 CP101611.1 Protein Homology CDS 2602038 2602685 . - 0 ID=cds-UTX04163.1;Parent=gene-NM058_13550;Dbxref=NCBI_GP:UTX04163.1;Name=UTX04163.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389439.1;locus_tag=NM058_13550;product=orotate phosphoribosyltransferase;protein_id=UTX04163.1;transl_table=11 CP101611.1 Genbank gene 2602664 2603383 . - . ID=gene-NM058_13555;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=NM058_13555 CP101611.1 Protein Homology CDS 2602664 2603383 . - 0 ID=cds-UTX04164.1;Parent=gene-NM058_13555;Dbxref=NCBI_GP:UTX04164.1;Name=UTX04164.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015388255.1;locus_tag=NM058_13555;product=orotidine-5'-phosphate decarboxylase;protein_id=UTX04164.1;transl_table=11 CP101611.1 Genbank gene 2603352 2604287 . - . ID=gene-NM058_13560;Name=NM058_13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13560 CP101611.1 Protein Homology CDS 2603352 2604287 . - 0 ID=cds-UTX04165.1;Parent=gene-NM058_13560;Dbxref=NCBI_GP:UTX04165.1;Name=UTX04165.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389437.1;locus_tag=NM058_13560;product=dihydroorotate dehydrogenase;protein_id=UTX04165.1;transl_table=11 CP101611.1 Genbank pseudogene 2604287 2605056 . - . ID=gene-NM058_13565;Name=pyrK;gbkey=Gene;gene=pyrK;gene_biotype=pseudogene;locus_tag=NM058_13565;pseudo=true CP101611.1 Protein Homology CDS 2604287 2605056 . - 0 ID=cds-NM058_13565;Parent=gene-NM058_13565;Note=frameshifted;gbkey=CDS;gene=pyrK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389436.1;locus_tag=NM058_13565;product=dihydroorotate oxidase B electron transfer subunit;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2605053 2608268 . - . ID=gene-NM058_13570;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=NM058_13570 CP101611.1 Protein Homology CDS 2605053 2608268 . - 0 ID=cds-UTX04166.1;Parent=gene-NM058_13570;Dbxref=NCBI_GP:UTX04166.1;Name=UTX04166.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carB;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389435.1;locus_tag=NM058_13570;product=carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit;protein_id=UTX04166.1;transl_table=11 CP101611.1 Genbank gene 2608253 2609347 . - . ID=gene-NM058_13575;Name=NM058_13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13575 CP101611.1 Protein Homology CDS 2608253 2609347 . - 0 ID=cds-UTX04167.1;Parent=gene-NM058_13575;Dbxref=NCBI_GP:UTX04167.1;Name=UTX04167.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389434.1;locus_tag=NM058_13575;product=carbamoyl phosphate synthase small subunit;protein_id=UTX04167.1;transl_table=11 CP101611.1 Genbank pseudogene 2609344 2610629 . - . ID=gene-NM058_13580;Name=NM058_13580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_13580;pseudo=true CP101611.1 Protein Homology CDS 2609344 2610629 . - 0 ID=cds-NM058_13580;Parent=gene-NM058_13580;Note=frameshifted;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389433.2;locus_tag=NM058_13580;product=dihydroorotase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2610609 2611523 . - . ID=gene-NM058_13585;Name=NM058_13585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_13585;pseudo=true CP101611.1 Protein Homology CDS 2610609 2611523 . - 0 ID=cds-NM058_13585;Parent=gene-NM058_13585;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389432.2;locus_tag=NM058_13585;product=aspartate carbamoyltransferase catalytic subunit;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2611669 2612976 . - . ID=gene-NM058_13590;Name=pyrP;gbkey=Gene;gene=pyrP;gene_biotype=protein_coding;locus_tag=NM058_13590 CP101611.1 Protein Homology CDS 2611669 2612976 . - 0 ID=cds-UTX04168.1;Parent=gene-NM058_13590;Dbxref=NCBI_GP:UTX04168.1;Name=UTX04168.1;gbkey=CDS;gene=pyrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389431.2;locus_tag=NM058_13590;product=uracil permease PyrP;protein_id=UTX04168.1;transl_table=11 CP101611.1 Genbank gene 2613150 2613695 . - . ID=gene-NM058_13595;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=NM058_13595 CP101611.1 Protein Homology CDS 2613150 2613695 . - 0 ID=cds-UTX04169.1;Parent=gene-NM058_13595;Dbxref=NCBI_GP:UTX04169.1;Name=UTX04169.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389430.1;locus_tag=NM058_13595;product=bifunctional pyrimidine operon transcriptional regulator/uracil phosphoribosyltransferase;protein_id=UTX04169.1;transl_table=11 CP101611.1 Genbank gene 2613878 2614789 . - . ID=gene-NM058_13600;Name=NM058_13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13600 CP101611.1 Protein Homology CDS 2613878 2614789 . - 0 ID=cds-UTX04170.1;Parent=gene-NM058_13600;Dbxref=NCBI_GP:UTX04170.1;Name=UTX04170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389429.3;locus_tag=NM058_13600;product=RluA family pseudouridine synthase;protein_id=UTX04170.1;transl_table=11 CP101611.1 Genbank pseudogene 2614791 2615254 . - . ID=gene-NM058_13605;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=pseudogene;locus_tag=NM058_13605;pseudo=true CP101611.1 Protein Homology CDS 2614791 2615254 . - 0 ID=cds-NM058_13605;Parent=gene-NM058_13605;Note=frameshifted;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005887;gbkey=CDS;gene=lspA;go_component=integral component of plasma membrane|0005887||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389428.1;locus_tag=NM058_13605;product=signal peptidase II;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2615357 2615730 . - . ID=gene-NM058_13610;Name=ylyA;gbkey=Gene;gene=ylyA;gene_biotype=pseudogene;locus_tag=NM058_13610;pseudo=true CP101611.1 Protein Homology CDS 2615357 2615730 . - 0 ID=cds-NM058_13610;Parent=gene-NM058_13610;Note=frameshifted;gbkey=CDS;gene=ylyA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389427.2;locus_tag=NM058_13610;product=sporulation-related RNA polymerase-binding protein YlyA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2615874 2618639 . - . ID=gene-NM058_13615;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=NM058_13615 CP101611.1 Protein Homology CDS 2615874 2618639 . - 0 ID=cds-UTX04171.1;Parent=gene-NM058_13615;Dbxref=NCBI_GP:UTX04171.1;Name=UTX04171.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389426.2;locus_tag=NM058_13615;product=isoleucine--tRNA ligase;protein_id=UTX04171.1;transl_table=11 CP101611.1 cmsearch binding_site 2618693 2618919 . - . ID=id-CP101611.1:2618693..2618919;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 CP101611.1 Genbank gene 2618982 2619476 . - . ID=gene-NM058_13620;Name=divIVA;gbkey=Gene;gene=divIVA;gene_biotype=protein_coding;locus_tag=NM058_13620 CP101611.1 Protein Homology CDS 2618982 2619476 . - 0 ID=cds-UTX04172.1;Parent=gene-NM058_13620;Dbxref=NCBI_GP:UTX04172.1;Name=UTX04172.1;gbkey=CDS;gene=divIVA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389425.1;locus_tag=NM058_13620;product=septum site-determining protein DivIVA;protein_id=UTX04172.1;transl_table=11 CP101611.1 Genbank gene 2619570 2620343 . - . ID=gene-NM058_13625;Name=NM058_13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13625 CP101611.1 Protein Homology CDS 2619570 2620343 . - 0 ID=cds-UTX04173.1;Parent=gene-NM058_13625;Dbxref=NCBI_GP:UTX04173.1;Name=UTX04173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389424.1;locus_tag=NM058_13625;product=RNA-binding protein;protein_id=UTX04173.1;transl_table=11 CP101611.1 Genbank gene 2620403 2620675 . - . ID=gene-NM058_13630;Name=NM058_13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13630 CP101611.1 Protein Homology CDS 2620403 2620675 . - 0 ID=cds-UTX04174.1;Parent=gene-NM058_13630;Dbxref=NCBI_GP:UTX04174.1;Name=UTX04174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389423.1;locus_tag=NM058_13630;product=YggT family protein;protein_id=UTX04174.1;transl_table=11 CP101611.1 Genbank gene 2620682 2621137 . - . ID=gene-NM058_13635;Name=sepF;gbkey=Gene;gene=sepF;gene_biotype=protein_coding;locus_tag=NM058_13635 CP101611.1 Protein Homology CDS 2620682 2621137 . - 0 ID=cds-UTX04175.1;Parent=gene-NM058_13635;Dbxref=NCBI_GP:UTX04175.1;Name=UTX04175.1;gbkey=CDS;gene=sepF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389422.3;locus_tag=NM058_13635;product=cell division protein SepF;protein_id=UTX04175.1;transl_table=11 CP101611.1 Genbank gene 2621134 2621826 . - . ID=gene-NM058_13640;Name=NM058_13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13640 CP101611.1 Protein Homology CDS 2621134 2621826 . - 0 ID=cds-UTX04176.1;Parent=gene-NM058_13640;Dbxref=NCBI_GP:UTX04176.1;Name=UTX04176.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389421.1;locus_tag=NM058_13640;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=UTX04176.1;transl_table=11 CP101611.1 Genbank gene 2621833 2622669 . - . ID=gene-NM058_13645;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=NM058_13645 CP101611.1 Protein Homology CDS 2621833 2622669 . - 0 ID=cds-UTX04177.1;Parent=gene-NM058_13645;Dbxref=NCBI_GP:UTX04177.1;Name=UTX04177.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389420.1;locus_tag=NM058_13645;product=peptidoglycan editing factor PgeF;protein_id=UTX04177.1;transl_table=11 CP101611.1 Genbank gene 2622833 2623078 . - . ID=gene-NM058_13650;Name=NM058_13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13650 CP101611.1 Protein Homology CDS 2622833 2623078 . - 0 ID=cds-UTX04178.1;Parent=gene-NM058_13650;Dbxref=NCBI_GP:UTX04178.1;Name=UTX04178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389419.1;locus_tag=NM058_13650;product=YlmC/YmxH family sporulation protein;protein_id=UTX04178.1;transl_table=11 CP101611.1 Genbank gene 2623161 2624441 . - . ID=gene-NM058_13655;Name=NM058_13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13655 CP101611.1 Protein Homology CDS 2623161 2624441 . - 0 ID=cds-UTX04179.1;Parent=gene-NM058_13655;Dbxref=NCBI_GP:UTX04179.1;Name=UTX04179.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389418.2;locus_tag=NM058_13655;product=acetylornithine deacetylase;protein_id=UTX04179.1;transl_table=11 CP101611.1 cmsearch riboswitch 2624528 2624629 . - . ID=id-CP101611.1:2624528..2624629;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 2624642 2625436 . - . ID=gene-NM058_13660;Name=NM058_13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13660 CP101611.1 Protein Homology CDS 2624642 2625436 . - 0 ID=cds-UTX04180.1;Parent=gene-NM058_13660;Dbxref=NCBI_GP:UTX04180.1;Name=UTX04180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389417.2;locus_tag=NM058_13660;product=ABC transporter ATP-binding protein;protein_id=UTX04180.1;transl_table=11 CP101611.1 Genbank gene 2625589 2626371 . - . ID=gene-NM058_13665;Name=sigG;gbkey=Gene;gene=sigG;gene_biotype=protein_coding;locus_tag=NM058_13665 CP101611.1 Protein Homology CDS 2625589 2626371 . - 0 ID=cds-UTX04181.1;Parent=gene-NM058_13665;Dbxref=NCBI_GP:UTX04181.1;Name=UTX04181.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=sigG;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389416.1;locus_tag=NM058_13665;product=RNA polymerase sporulation sigma factor SigG;protein_id=UTX04181.1;transl_table=11 CP101611.1 Genbank gene 2626510 2627229 . - . ID=gene-NM058_13670;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=NM058_13670 CP101611.1 Protein Homology CDS 2626510 2627229 . - 0 ID=cds-UTX04182.1;Parent=gene-NM058_13670;Dbxref=NCBI_GP:UTX04182.1;Name=UTX04182.1;Ontology_term=GO:0006352,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=sigE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389415.2;locus_tag=NM058_13670;product=RNA polymerase sporulation sigma factor SigE;protein_id=UTX04182.1;transl_table=11 CP101611.1 Genbank gene 2627292 2628221 . - . ID=gene-NM058_13675;Name=spoIIGA;gbkey=Gene;gene=spoIIGA;gene_biotype=protein_coding;locus_tag=NM058_13675 CP101611.1 Protein Homology CDS 2627292 2628221 . - 0 ID=cds-UTX07052.1;Parent=gene-NM058_13675;Dbxref=NCBI_GP:UTX07052.1;Name=UTX07052.1;Ontology_term=GO:0030436,GO:0004190;gbkey=CDS;gene=spoIIGA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389414.1;locus_tag=NM058_13675;product=sigma-E processing peptidase SpoIIGA;protein_id=UTX07052.1;transl_table=11 CP101611.1 Genbank pseudogene 2628411 2632707 . - . ID=gene-NM058_13680;Name=NM058_13680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_13680;pseudo=true CP101611.1 Protein Homology CDS 2628411 2632707 . - 0 ID=cds-NM058_13680;Parent=gene-NM058_13680;Note=frameshifted;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389413.1;locus_tag=NM058_13680;product=S8 family serine peptidase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2633009 2634156 . - . ID=gene-NM058_13685;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=pseudogene;locus_tag=NM058_13685;pseudo=true CP101611.1 Protein Homology CDS 2633009 2634156 . - 0 ID=cds-NM058_13685;Parent=gene-NM058_13685;Note=frameshifted;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389412.2;locus_tag=NM058_13685;product=cell division protein FtsZ;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2634192 2635514 . - . ID=gene-NM058_13690;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=NM058_13690 CP101611.1 Protein Homology CDS 2634192 2635514 . - 0 ID=cds-UTX04183.1;Parent=gene-NM058_13690;Dbxref=NCBI_GP:UTX04183.1;Name=UTX04183.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389411.2;locus_tag=NM058_13690;product=cell division protein FtsA;protein_id=UTX04183.1;transl_table=11 CP101611.1 Genbank gene 2635691 2636056 . - . ID=gene-NM058_13695;Name=NM058_13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13695 CP101611.1 Protein Homology CDS 2635691 2636056 . - 0 ID=cds-UTX04184.1;Parent=gene-NM058_13695;Dbxref=NCBI_GP:UTX04184.1;Name=UTX04184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389410.1;locus_tag=NM058_13695;product=small basic family protein;protein_id=UTX04184.1;transl_table=11 CP101611.1 Genbank pseudogene 2636074 2636780 . - . ID=gene-NM058_13700;Name=NM058_13700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_13700;pseudo=true CP101611.1 Protein Homology CDS 2636074 2636780 . - 0 ID=cds-NM058_13700;Parent=gene-NM058_13700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389409.2;locus_tag=NM058_13700;product=DUF881 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2636803 2637498 . - . ID=gene-NM058_13705;Name=NM058_13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13705 CP101611.1 Protein Homology CDS 2636803 2637498 . - 0 ID=cds-UTX04185.1;Parent=gene-NM058_13705;Dbxref=NCBI_GP:UTX04185.1;Name=UTX04185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389408.2;locus_tag=NM058_13705;product=DUF881 domain-containing protein;protein_id=UTX04185.1;transl_table=11 CP101611.1 Genbank gene 2637495 2638286 . - . ID=gene-NM058_13710;Name=divIB;gbkey=Gene;gene=divIB;gene_biotype=protein_coding;locus_tag=NM058_13710 CP101611.1 Protein Homology CDS 2637495 2638286 . - 0 ID=cds-UTX04186.1;Parent=gene-NM058_13710;Dbxref=NCBI_GP:UTX04186.1;Name=UTX04186.1;gbkey=CDS;gene=divIB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389407.1;locus_tag=NM058_13710;product=cell division protein DivIB;protein_id=UTX04186.1;transl_table=11 CP101611.1 Genbank gene 2638416 2639327 . - . ID=gene-NM058_13715;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=NM058_13715 CP101611.1 Protein Homology CDS 2638416 2639327 . - 0 ID=cds-UTX04187.1;Parent=gene-NM058_13715;Dbxref=NCBI_GP:UTX04187.1;Name=UTX04187.1;Ontology_term=GO:0009252,GO:0008762;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389406.1;locus_tag=NM058_13715;product=UDP-N-acetylmuramate dehydrogenase;protein_id=UTX04187.1;transl_table=11 CP101611.1 Genbank pseudogene 2639359 2640449 . - . ID=gene-NM058_13720;Name=murG;gbkey=Gene;gene=murG;gene_biotype=pseudogene;locus_tag=NM058_13720;pseudo=true CP101611.1 Protein Homology CDS 2639359 2640449 . - 0 ID=cds-NM058_13720;Parent=gene-NM058_13720;Note=frameshifted;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389405.2;locus_tag=NM058_13720;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2640571 2641670 . - . ID=gene-NM058_13725;Name=spoVE;gbkey=Gene;gene=spoVE;gene_biotype=pseudogene;locus_tag=NM058_13725;pseudo=true CP101611.1 Protein Homology CDS 2640571 2641670 . - 0 ID=cds-NM058_13725;Parent=gene-NM058_13725;Note=frameshifted;Ontology_term=GO:0009252,GO:0030436,GO:0003674,GO:0016021;gbkey=CDS;gene=spoVE;go_component=integral component of membrane|0016021||IEA;go_function=molecular_function|0003674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389404.1;locus_tag=NM058_13725;product=stage V sporulation protein E;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2641731 2643085 . - . ID=gene-NM058_13730;Name=murD;gbkey=Gene;gene=murD;gene_biotype=pseudogene;locus_tag=NM058_13730;pseudo=true CP101611.1 Protein Homology CDS 2641731 2643085 . - 0 ID=cds-NM058_13730;Parent=gene-NM058_13730;Note=frameshifted;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389403.1;locus_tag=NM058_13730;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2643086 2644058 . - . ID=gene-NM058_13735;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=pseudogene;locus_tag=NM058_13735;pseudo=true CP101611.1 Protein Homology CDS 2643086 2644058 . - 0 ID=cds-NM058_13735;Parent=gene-NM058_13735;Note=frameshifted;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389402.2;locus_tag=NM058_13735;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2644169 2645653 . - . ID=gene-NM058_13740;Name=NM058_13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13740 CP101611.1 Protein Homology CDS 2644169 2645653 . - 0 ID=cds-UTX04188.1;Parent=gene-NM058_13740;Dbxref=NCBI_GP:UTX04188.1;Name=UTX04188.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389401.1;locus_tag=NM058_13740;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=UTX04188.1;transl_table=11 CP101611.1 Genbank pseudogene 2645829 2647766 . - . ID=gene-NM058_13745;Name=NM058_13745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_13745;pseudo=true CP101611.1 Protein Homology CDS 2645829 2647766 . - 0 ID=cds-NM058_13745;Parent=gene-NM058_13745;Note=frameshifted;Ontology_term=GO:0009252,GO:0030436,GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389400.2;locus_tag=NM058_13745;product=stage V sporulation protein D;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2647898 2650048 . - . ID=gene-NM058_13750;Name=pbpB;gbkey=Gene;gene=pbpB;gene_biotype=protein_coding;locus_tag=NM058_13750 CP101611.1 Protein Homology CDS 2647898 2650048 . - 0 ID=cds-UTX04189.1;Parent=gene-NM058_13750;Dbxref=NCBI_GP:UTX04189.1;Name=UTX04189.1;gbkey=CDS;gene=pbpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389399.2;locus_tag=NM058_13750;product=penicillin-binding protein 2B;protein_id=UTX04189.1;transl_table=11 CP101611.1 Genbank gene 2650045 2650398 . - . ID=gene-NM058_13755;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=NM058_13755 CP101611.1 Protein Homology CDS 2650045 2650398 . - 0 ID=cds-UTX04190.1;Parent=gene-NM058_13755;Dbxref=NCBI_GP:UTX04190.1;Name=UTX04190.1;Ontology_term=GO:0000910,GO:0016021;gbkey=CDS;gene=ftsL;go_component=integral component of membrane|0016021||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389398.1;locus_tag=NM058_13755;product=cell division protein FtsL;protein_id=UTX04190.1;transl_table=11 CP101611.1 Genbank gene 2650438 2651373 . - . ID=gene-NM058_13760;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=NM058_13760 CP101611.1 Protein Homology CDS 2650438 2651373 . - 0 ID=cds-UTX04191.1;Parent=gene-NM058_13760;Dbxref=NCBI_GP:UTX04191.1;Name=UTX04191.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389397.1;locus_tag=NM058_13760;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=UTX04191.1;transl_table=11 CP101611.1 Genbank gene 2651443 2651874 . - . ID=gene-NM058_13765;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=NM058_13765 CP101611.1 Protein Homology CDS 2651443 2651874 . - 0 ID=cds-UTX07053.1;Parent=gene-NM058_13765;Dbxref=NCBI_GP:UTX07053.1;Name=UTX07053.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389396.1;locus_tag=NM058_13765;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=UTX07053.1;transl_table=11 CP101611.1 Genbank pseudogene 2652000 2653617 . - . ID=gene-NM058_13770;Name=bshC;gbkey=Gene;gene=bshC;gene_biotype=pseudogene;locus_tag=NM058_13770;pseudo=true CP101611.1 Protein Homology CDS 2652000 2653617 . - 0 ID=cds-NM058_13770;Parent=gene-NM058_13770;Note=frameshifted;Ontology_term=GO:0071793,GO:0003824;gbkey=CDS;gene=bshC;go_function=catalytic activity|0003824||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389395.2;locus_tag=NM058_13770;product=bacillithiol biosynthesis cysteine-adding enzyme BshC;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2653688 2654584 . - . ID=gene-NM058_13775;Name=NM058_13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13775 CP101611.1 Protein Homology CDS 2653688 2654584 . - 0 ID=cds-UTX04192.1;Parent=gene-NM058_13775;Dbxref=NCBI_GP:UTX04192.1;Name=UTX04192.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389394.1;locus_tag=NM058_13775;product=2-dehydropantoate 2-reductase;protein_id=UTX04192.1;transl_table=11 CP101611.1 Genbank gene 2654744 2655226 . + . ID=gene-NM058_13780;Name=NM058_13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13780 CP101611.1 Protein Homology CDS 2654744 2655226 . + 0 ID=cds-UTX04193.1;Parent=gene-NM058_13780;Dbxref=NCBI_GP:UTX04193.1;Name=UTX04193.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389393.2;locus_tag=NM058_13780;product=N-acetyltransferase;protein_id=UTX04193.1;transl_table=11 CP101611.1 Genbank pseudogene 2655266 2655861 . - . ID=gene-NM058_13785;Name=gerR;gbkey=Gene;gene=gerR;gene_biotype=pseudogene;locus_tag=NM058_13785;pseudo=true CP101611.1 Protein Homology CDS 2655266 2655861 . - 0 ID=cds-NM058_13785;Parent=gene-NM058_13785;Note=frameshifted;gbkey=CDS;gene=gerR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003181524.1;locus_tag=NM058_13785;product=sporulation specific transcriptional regulator GerR;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2656006 2656185 . - . ID=gene-NM058_13790;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=NM058_13790 CP101611.1 Protein Homology CDS 2656006 2656185 . - 0 ID=cds-UTX04194.1;Parent=gene-NM058_13790;Dbxref=NCBI_GP:UTX04194.1;Name=UTX04194.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389391.1;locus_tag=NM058_13790;product=50S ribosomal protein L32;protein_id=UTX04194.1;transl_table=11 CP101611.1 Genbank pseudogene 2656207 2656724 . - . ID=gene-NM058_13795;Name=NM058_13795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_13795;pseudo=true CP101611.1 Protein Homology CDS 2656207 2656724 . - 0 ID=cds-NM058_13795;Parent=gene-NM058_13795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389390.1;locus_tag=NM058_13795;product=DUF177 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2656752 2656937 . + . ID=gene-NM058_13800;Name=NM058_13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13800 CP101611.1 Protein Homology CDS 2656752 2656937 . + 0 ID=cds-UTX04195.1;Parent=gene-NM058_13800;Dbxref=NCBI_GP:UTX04195.1;Name=UTX04195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097727.1;locus_tag=NM058_13800;product=hypothetical protein;protein_id=UTX04195.1;transl_table=11 CP101611.1 Genbank gene 2656934 2658181 . + . ID=gene-NM058_13805;Name=NM058_13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13805 CP101611.1 Protein Homology CDS 2656934 2658181 . + 0 ID=cds-UTX04196.1;Parent=gene-NM058_13805;Dbxref=NCBI_GP:UTX04196.1;Name=UTX04196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389389.1;locus_tag=NM058_13805;product=nucleotidyltransferase;protein_id=UTX04196.1;transl_table=11 CP101611.1 Genbank gene 2658198 2659223 . - . ID=gene-NM058_13810;Name=ddcP;gbkey=Gene;gene=ddcP;gene_biotype=protein_coding;gene_synonym=ylbL;locus_tag=NM058_13810 CP101611.1 Protein Homology CDS 2658198 2659223 . - 0 ID=cds-UTX04197.1;Parent=gene-NM058_13810;Dbxref=NCBI_GP:UTX04197.1;Name=UTX04197.1;gbkey=CDS;gene=ddcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389388.2;locus_tag=NM058_13810;product=protease DdcP;protein_id=UTX04197.1;transl_table=11 CP101611.1 Genbank pseudogene 2659225 2660006 . - . ID=gene-NM058_13815;Name=NM058_13815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_13815;pseudo=true CP101611.1 Protein Homology CDS 2659225 2660006 . - 0 ID=cds-NM058_13815;Parent=gene-NM058_13815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003238724.1;locus_tag=NM058_13815;product=patatin family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2660187 2661482 . + . ID=gene-NM058_13820;Name=spoVV;gbkey=Gene;gene=spoVV;gene_biotype=protein_coding;locus_tag=NM058_13820 CP101611.1 Protein Homology CDS 2660187 2661482 . + 0 ID=cds-UTX04198.1;Parent=gene-NM058_13820;Dbxref=NCBI_GP:UTX04198.1;Name=UTX04198.1;gbkey=CDS;gene=spoVV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389386.1;locus_tag=NM058_13820;product=dipicolinic acid transporter SpoVV;protein_id=UTX04198.1;transl_table=11 CP101611.1 Genbank gene 2661423 2661908 . - . ID=gene-NM058_13825;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=NM058_13825 CP101611.1 Protein Homology CDS 2661423 2661908 . - 0 ID=cds-UTX04199.1;Parent=gene-NM058_13825;Dbxref=NCBI_GP:UTX04199.1;Name=UTX04199.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389385.1;locus_tag=NM058_13825;product=pantetheine-phosphate adenylyltransferase;protein_id=UTX04199.1;transl_table=11 CP101611.1 Genbank gene 2661913 2662467 . - . ID=gene-NM058_13830;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=NM058_13830 CP101611.1 Protein Homology CDS 2661913 2662467 . - 0 ID=cds-UTX04200.1;Parent=gene-NM058_13830;Dbxref=NCBI_GP:UTX04200.1;Name=UTX04200.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389384.2;locus_tag=NM058_13830;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=UTX04200.1;transl_table=11 CP101611.1 Genbank gene 2662792 2663064 . - . ID=gene-NM058_13835;Name=NM058_13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13835 CP101611.1 Protein Homology CDS 2662792 2663064 . - 0 ID=cds-UTX04201.1;Parent=gene-NM058_13835;Dbxref=NCBI_GP:UTX04201.1;Name=UTX04201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389383.1;locus_tag=NM058_13835;product=YlbG family protein;protein_id=UTX04201.1;transl_table=11 CP101611.1 Genbank gene 2663119 2663568 . - . ID=gene-NM058_13840;Name=ricF;gbkey=Gene;gene=ricF;gene_biotype=protein_coding;locus_tag=NM058_13840 CP101611.1 Protein Homology CDS 2663119 2663568 . - 0 ID=cds-UTX04202.1;Parent=gene-NM058_13840;Dbxref=NCBI_GP:UTX04202.1;Name=UTX04202.1;gbkey=CDS;gene=ricF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389382.1;locus_tag=NM058_13840;product=competence/sporulation regulator complex protein RicF;protein_id=UTX04202.1;transl_table=11 CP101611.1 Genbank gene 2663673 2663912 . - . ID=gene-NM058_13845;Name=NM058_13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13845 CP101611.1 Protein Homology CDS 2663673 2663912 . - 0 ID=cds-UTX04203.1;Parent=gene-NM058_13845;Dbxref=NCBI_GP:UTX04203.1;Name=UTX04203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389381.1;locus_tag=NM058_13845;product=YlbE-like family protein;protein_id=UTX04203.1;transl_table=11 CP101611.1 Genbank gene 2663928 2664326 . - . ID=gene-NM058_13850;Name=NM058_13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13850 CP101611.1 Protein Homology CDS 2663928 2664326 . - 0 ID=cds-UTX04204.1;Parent=gene-NM058_13850;Dbxref=NCBI_GP:UTX04204.1;Name=UTX04204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389380.1;locus_tag=NM058_13850;product=YlbD family protein;protein_id=UTX04204.1;transl_table=11 CP101611.1 Genbank gene 2664561 2665601 . - . ID=gene-NM058_13855;Name=NM058_13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13855 CP101611.1 Protein Homology CDS 2664561 2665601 . - 0 ID=cds-UTX04205.1;Parent=gene-NM058_13855;Dbxref=NCBI_GP:UTX04205.1;Name=UTX04205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389379.1;locus_tag=NM058_13855;product=CAP domain-containing protein;protein_id=UTX04205.1;transl_table=11 CP101611.1 Genbank gene 2665686 2666132 . - . ID=gene-NM058_13860;Name=NM058_13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13860 CP101611.1 Protein Homology CDS 2665686 2666132 . - 0 ID=cds-UTX04206.1;Parent=gene-NM058_13860;Dbxref=NCBI_GP:UTX04206.1;Name=UTX04206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389378.2;locus_tag=NM058_13860;product=CBS domain-containing protein;protein_id=UTX04206.1;transl_table=11 CP101611.1 Genbank gene 2666272 2666634 . + . ID=gene-NM058_13865;Name=NM058_13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13865 CP101611.1 Protein Homology CDS 2666272 2666634 . + 0 ID=cds-UTX04207.1;Parent=gene-NM058_13865;Dbxref=NCBI_GP:UTX04207.1;Name=UTX04207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389377.1;locus_tag=NM058_13865;product=YugN-like family protein;protein_id=UTX04207.1;transl_table=11 CP101611.1 Genbank gene 2666666 2667559 . - . ID=gene-NM058_13870;Name=ctaG;gbkey=Gene;gene=ctaG;gene_biotype=protein_coding;locus_tag=NM058_13870 CP101611.1 Protein Homology CDS 2666666 2667559 . - 0 ID=cds-UTX04208.1;Parent=gene-NM058_13870;Dbxref=NCBI_GP:UTX04208.1;Name=UTX04208.1;gbkey=CDS;gene=ctaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389376.1;locus_tag=NM058_13870;product=cytochrome c oxidase assembly factor CtaG;protein_id=UTX04208.1;transl_table=11 CP101611.1 Genbank gene 2667586 2667918 . - . ID=gene-NM058_13875;Name=ctaF;gbkey=Gene;gene=ctaF;gene_biotype=protein_coding;locus_tag=NM058_13875 CP101611.1 Protein Homology CDS 2667586 2667918 . - 0 ID=cds-UTX04209.1;Parent=gene-NM058_13875;Dbxref=NCBI_GP:UTX04209.1;Name=UTX04209.1;Ontology_term=GO:0004129,GO:0016021;gbkey=CDS;gene=ctaF;go_component=integral component of membrane|0016021||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389375.1;locus_tag=NM058_13875;product=cytochrome c oxidase subunit IVB;protein_id=UTX04209.1;transl_table=11 CP101611.1 Genbank gene 2667921 2668544 . - . ID=gene-NM058_13880;Name=ctaE;gbkey=Gene;gene=ctaE;gene_biotype=protein_coding;locus_tag=NM058_13880 CP101611.1 Protein Homology CDS 2667921 2668544 . - 0 ID=cds-UTX04210.1;Parent=gene-NM058_13880;Dbxref=NCBI_GP:UTX04210.1;Name=UTX04210.1;gbkey=CDS;gene=ctaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389374.1;locus_tag=NM058_13880;product=cytochrome c oxidase subunit III;protein_id=UTX04210.1;transl_table=11 CP101611.1 Genbank pseudogene 2668544 2670408 . - . ID=gene-NM058_13885;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=pseudogene;locus_tag=NM058_13885;pseudo=true CP101611.1 Protein Homology CDS 2668544 2670408 . - 0 ID=cds-NM058_13885;Parent=gene-NM058_13885;Note=frameshifted;Ontology_term=GO:0004129;gbkey=CDS;gene=ctaD;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389373.2;locus_tag=NM058_13885;product=cytochrome c oxidase subunit I;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2670441 2671511 . - . ID=gene-NM058_13890;Name=coxB;gbkey=Gene;gene=coxB;gene_biotype=protein_coding;locus_tag=NM058_13890 CP101611.1 Protein Homology CDS 2670441 2671511 . - 0 ID=cds-UTX04211.1;Parent=gene-NM058_13890;Dbxref=NCBI_GP:UTX04211.1;Name=UTX04211.1;Ontology_term=GO:0004129;gbkey=CDS;gene=coxB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389372.1;locus_tag=NM058_13890;product=cytochrome c oxidase subunit II;protein_id=UTX04211.1;transl_table=11 CP101611.1 Genbank gene 2671752 2672669 . - . ID=gene-NM058_13895;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=NM058_13895 CP101611.1 Protein Homology CDS 2671752 2672669 . - 0 ID=cds-UTX04212.1;Parent=gene-NM058_13895;Dbxref=NCBI_GP:UTX04212.1;Name=UTX04212.1;Ontology_term=GO:0006783,GO:0008495;gbkey=CDS;gene=cyoE;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389371.1;locus_tag=NM058_13895;product=heme o synthase;protein_id=UTX04212.1;transl_table=11 CP101611.1 Genbank pseudogene 2673024 2673942 . + . ID=gene-NM058_13900;Name=ctaA;gbkey=Gene;gene=ctaA;gene_biotype=pseudogene;locus_tag=NM058_13900;pseudo=true CP101611.1 Protein Homology CDS 2673024 2673942 . + 0 ID=cds-NM058_13900;Parent=gene-NM058_13900;Note=frameshifted;gbkey=CDS;gene=ctaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389370.1;locus_tag=NM058_13900;product=heme A synthase CtaA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2674406 2677852 . - . ID=gene-NM058_13905;Name=pyc;gbkey=Gene;gene=pyc;gene_biotype=protein_coding;locus_tag=NM058_13905 CP101611.1 Protein Homology CDS 2674406 2677852 . - 0 ID=cds-UTX04213.1;Parent=gene-NM058_13905;Dbxref=NCBI_GP:UTX04213.1;Name=UTX04213.1;Ontology_term=GO:0006094,GO:0004736,GO:0005737;gbkey=CDS;gene=pyc;go_component=cytoplasm|0005737||IEA;go_function=pyruvate carboxylase activity|0004736||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389369.1;locus_tag=NM058_13905;product=pyruvate carboxylase;protein_id=UTX04213.1;transl_table=11 CP101611.1 Genbank pseudogene 2677927 2679136 . - . ID=gene-NM058_13910;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=pseudogene;locus_tag=NM058_13910;pseudo=true CP101611.1 Protein Homology CDS 2677927 2679136 . - 0 ID=cds-NM058_13910;Parent=gene-NM058_13910;Note=frameshifted;gbkey=CDS;gene=ftsW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389368.1;locus_tag=NM058_13910;product=cell division protein FtsW;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2679343 2679624 . - . ID=gene-NM058_13915;Name=NM058_13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13915 CP101611.1 Protein Homology CDS 2679343 2679624 . - 0 ID=cds-UTX04214.1;Parent=gene-NM058_13915;Dbxref=NCBI_GP:UTX04214.1;Name=UTX04214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389367.1;locus_tag=NM058_13915;product=YlaN family protein;protein_id=UTX04214.1;transl_table=11 CP101611.1 Genbank gene 2679722 2680651 . - . ID=gene-NM058_13920;Name=glsA;gbkey=Gene;gene=glsA;gene_biotype=protein_coding;locus_tag=NM058_13920 CP101611.1 Protein Homology CDS 2679722 2680651 . - 0 ID=cds-UTX04215.1;Parent=gene-NM058_13920;Dbxref=NCBI_GP:UTX04215.1;Name=UTX04215.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsA;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389366.1;locus_tag=NM058_13920;product=glutaminase A;protein_id=UTX04215.1;transl_table=11 CP101611.1 Genbank gene 2680754 2681239 . + . ID=gene-NM058_13925;Name=NM058_13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13925 CP101611.1 Protein Homology CDS 2680754 2681239 . + 0 ID=cds-UTX04216.1;Parent=gene-NM058_13925;Dbxref=NCBI_GP:UTX04216.1;Name=UTX04216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389365.1;locus_tag=NM058_13925;product=peptidyl-prolyl cis-trans isomerase;protein_id=UTX04216.1;transl_table=11 CP101611.1 Genbank pseudogene 2681242 2682568 . - . ID=gene-NM058_13930;Name=NM058_13930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_13930;pseudo=true CP101611.1 Protein Homology CDS 2681242 2682568 . - 0 ID=cds-NM058_13930;Parent=gene-NM058_13930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389364.1;locus_tag=NM058_13930;product=PhoH family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2682723 2683352 . + . ID=gene-NM058_13935;Name=NM058_13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13935 CP101611.1 Protein Homology CDS 2682723 2683352 . + 0 ID=cds-UTX04217.1;Parent=gene-NM058_13935;Dbxref=NCBI_GP:UTX04217.1;Name=UTX04217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389363.1;locus_tag=NM058_13935;product=YhcN/YlaJ family sporulation lipoprotein;protein_id=UTX04217.1;transl_table=11 CP101611.1 Genbank gene 2683435 2683692 . + . ID=gene-NM058_13940;Name=NM058_13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13940 CP101611.1 Protein Homology CDS 2683435 2683692 . + 0 ID=cds-UTX04218.1;Parent=gene-NM058_13940;Dbxref=NCBI_GP:UTX04218.1;Name=UTX04218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012009835.1;locus_tag=NM058_13940;product=YlaI family protein;protein_id=UTX04218.1;transl_table=11 CP101611.1 Genbank gene 2683699 2684016 . - . ID=gene-NM058_13945;Name=NM058_13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13945 CP101611.1 Protein Homology CDS 2683699 2684016 . - 0 ID=cds-UTX04219.1;Parent=gene-NM058_13945;Dbxref=NCBI_GP:UTX04219.1;Name=UTX04219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389361.1;locus_tag=NM058_13945;product=YlaH-like family protein;protein_id=UTX04219.1;transl_table=11 CP101611.1 Genbank gene 2684073 2685911 . - . ID=gene-NM058_13950;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=NM058_13950 CP101611.1 Protein Homology CDS 2684073 2685911 . - 0 ID=cds-UTX04220.1;Parent=gene-NM058_13950;Dbxref=NCBI_GP:UTX04220.1;Name=UTX04220.1;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389360.1;locus_tag=NM058_13950;product=translational GTPase TypA;protein_id=UTX04220.1;transl_table=11 CP101611.1 Genbank gene 2686024 2686212 . + . ID=gene-NM058_13955;Name=NM058_13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13955 CP101611.1 Protein Homology CDS 2686024 2686212 . + 0 ID=cds-UTX04221.1;Parent=gene-NM058_13955;Dbxref=NCBI_GP:UTX04221.1;Name=UTX04221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389359.1;locus_tag=NM058_13955;product=YlaF family protein;protein_id=UTX04221.1;transl_table=11 CP101611.1 Genbank gene 2686484 2687095 . + . ID=gene-NM058_13960;Name=NM058_13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13960 CP101611.1 Protein Homology CDS 2686484 2687095 . + 0 ID=cds-UTX04222.1;Parent=gene-NM058_13960;Dbxref=NCBI_GP:UTX04222.1;Name=UTX04222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389358.1;locus_tag=NM058_13960;product=hypothetical protein;protein_id=UTX04222.1;transl_table=11 CP101611.1 Genbank pseudogene 2687137 2687429 . - . ID=gene-NM058_13965;Name=NM058_13965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_13965;pseudo=true CP101611.1 Protein Homology CDS 2687137 2687429 . - 0 ID=cds-NM058_13965;Parent=gene-NM058_13965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389357.1;locus_tag=NM058_13965;product=zf-HC2 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2687426 2687947 . - . ID=gene-NM058_13970;Name=ylaC;gbkey=Gene;gene=ylaC;gene_biotype=protein_coding;locus_tag=NM058_13970 CP101611.1 Protein Homology CDS 2687426 2687947 . - 0 ID=cds-UTX07054.1;Parent=gene-NM058_13970;Dbxref=NCBI_GP:UTX07054.1;Name=UTX07054.1;gbkey=CDS;gene=ylaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389356.1;locus_tag=NM058_13970;product=RNA polymerase sigma factor YlaC;protein_id=UTX07054.1;transl_table=11 CP101611.1 Genbank gene 2687947 2688216 . - . ID=gene-NM058_13975;Name=NM058_13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13975 CP101611.1 Protein Homology CDS 2687947 2688216 . - 0 ID=cds-UTX04223.1;Parent=gene-NM058_13975;Dbxref=NCBI_GP:UTX04223.1;Name=UTX04223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389355.1;locus_tag=NM058_13975;product=hypothetical protein;protein_id=UTX04223.1;transl_table=11 CP101611.1 Genbank pseudogene 2688206 2690145 . - . ID=gene-NM058_13980;Name=NM058_13980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_13980;pseudo=true CP101611.1 Protein Homology CDS 2688206 2690145 . - 0 ID=cds-NM058_13980;Parent=gene-NM058_13980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389354.1;locus_tag=NM058_13980;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2690435 2692000 . + . ID=gene-NM058_13985;Name=nprE;gbkey=Gene;gene=nprE;gene_biotype=protein_coding;locus_tag=NM058_13985 CP101611.1 Protein Homology CDS 2690435 2692000 . + 0 ID=cds-UTX04224.1;Parent=gene-NM058_13985;Dbxref=NCBI_GP:UTX04224.1;Name=UTX04224.1;gbkey=CDS;gene=nprE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389353.1;locus_tag=NM058_13985;product=neutral metalloprotease NprE;protein_id=UTX04224.1;transl_table=11 CP101611.1 Genbank gene 2692100 2692534 . + . ID=gene-NM058_13990;Name=NM058_13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13990 CP101611.1 Protein Homology CDS 2692100 2692534 . + 0 ID=cds-UTX04225.1;Parent=gene-NM058_13990;Dbxref=NCBI_GP:UTX04225.1;Name=UTX04225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003184879.1;locus_tag=NM058_13990;product=Rrf2 family transcriptional regulator;protein_id=UTX04225.1;transl_table=11 CP101611.1 Genbank gene 2692610 2693512 . + . ID=gene-NM058_13995;Name=NM058_13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_13995 CP101611.1 Protein Homology CDS 2692610 2693512 . + 0 ID=cds-UTX04226.1;Parent=gene-NM058_13995;Dbxref=NCBI_GP:UTX04226.1;Name=UTX04226.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258304.1;locus_tag=NM058_13995;product=prolyl oligopeptidase family serine peptidase;protein_id=UTX04226.1;transl_table=11 CP101611.1 Genbank pseudogene 2693654 2694203 . + . ID=gene-NM058_14000;Name=NM058_14000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14000;pseudo=true CP101611.1 Protein Homology CDS 2693654 2694203 . + 0 ID=cds-NM058_14000;Parent=gene-NM058_14000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389352.1;locus_tag=NM058_14000;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2694275 2694702 . - . ID=gene-NM058_14005;Name=NM058_14005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14005;pseudo=true CP101611.1 Protein Homology CDS 2694275 2694702 . - 0 ID=cds-NM058_14005;Parent=gene-NM058_14005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389351.1;locus_tag=NM058_14005;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2694728 2695525 . - . ID=gene-NM058_14010;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=NM058_14010 CP101611.1 Protein Homology CDS 2694728 2695525 . - 0 ID=cds-UTX04227.1;Parent=gene-NM058_14010;Dbxref=NCBI_GP:UTX04227.1;Name=UTX04227.1;Ontology_term=GO:0006020,GO:0052834;gbkey=CDS;gene=suhB;go_function=inositol monophosphate phosphatase activity|0052834||IEA;go_process=inositol metabolic process|0006020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389350.1;locus_tag=NM058_14010;product=inositol-1-monophosphatase;protein_id=UTX04227.1;transl_table=11 CP101611.1 Genbank gene 2695664 2695852 . - . ID=gene-NM058_14015;Name=NM058_14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14015 CP101611.1 Protein Homology CDS 2695664 2695852 . - 0 ID=cds-UTX04228.1;Parent=gene-NM058_14015;Dbxref=NCBI_GP:UTX04228.1;Name=UTX04228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389349.1;locus_tag=NM058_14015;product=hypothetical protein;protein_id=UTX04228.1;transl_table=11 CP101611.1 Genbank gene 2696092 2696730 . + . ID=gene-NM058_14020;Name=NM058_14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14020 CP101611.1 Protein Homology CDS 2696092 2696730 . + 0 ID=cds-UTX04229.1;Parent=gene-NM058_14020;Dbxref=NCBI_GP:UTX04229.1;Name=UTX04229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389348.1;locus_tag=NM058_14020;product=YktB family protein;protein_id=UTX04229.1;transl_table=11 CP101611.1 Genbank gene 2696763 2697029 . - . ID=gene-NM058_14025;Name=NM058_14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14025 CP101611.1 Protein Homology CDS 2696763 2697029 . - 0 ID=cds-UTX04230.1;Parent=gene-NM058_14025;Dbxref=NCBI_GP:UTX04230.1;Name=UTX04230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389347.1;locus_tag=NM058_14025;product=UPF0223 family protein;protein_id=UTX04230.1;transl_table=11 CP101611.1 Genbank gene 2697214 2698686 . + . ID=gene-NM058_14030;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=NM058_14030 CP101611.1 Protein Homology CDS 2697214 2698686 . + 0 ID=cds-UTX04231.1;Parent=gene-NM058_14030;Dbxref=NCBI_GP:UTX04231.1;Name=UTX04231.1;gbkey=CDS;gene=speA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389346.1;locus_tag=NM058_14030;product=arginine decarboxylase;protein_id=UTX04231.1;transl_table=11 CP101611.1 Genbank pseudogene 2698802 2699951 . + . ID=gene-NM058_14035;Name=NM058_14035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14035;pseudo=true CP101611.1 Protein Homology CDS 2698802 2699951 . + 0 ID=cds-NM058_14035;Parent=gene-NM058_14035;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611387.1;locus_tag=NM058_14035;product=IS3 family transposase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2700010 2700129 . - . ID=gene-NM058_14040;Name=NM058_14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14040 CP101611.1 Protein Homology CDS 2700010 2700129 . - 0 ID=cds-UTX04232.1;Parent=gene-NM058_14040;Dbxref=NCBI_GP:UTX04232.1;Name=UTX04232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097726.1;locus_tag=NM058_14040;product=GapA-binding peptide SR1P;protein_id=UTX04232.1;transl_table=11 CP101611.1 Genbank gene 2700548 2700922 . + . ID=gene-NM058_14045;Name=slp;gbkey=Gene;gene=slp;gene_biotype=protein_coding;locus_tag=NM058_14045 CP101611.1 Protein Homology CDS 2700548 2700922 . + 0 ID=cds-UTX04233.1;Parent=gene-NM058_14045;Dbxref=NCBI_GP:UTX04233.1;Name=UTX04233.1;gbkey=CDS;gene=slp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389345.1;locus_tag=NM058_14045;product=peptidoglycan-associated lipoprotein Slp;protein_id=UTX04233.1;transl_table=11 CP101611.1 Genbank gene 2700967 2702379 . - . ID=gene-NM058_14050;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=NM058_14050 CP101611.1 Protein Homology CDS 2700967 2702379 . - 0 ID=cds-UTX04234.1;Parent=gene-NM058_14050;Dbxref=NCBI_GP:UTX04234.1;Name=UTX04234.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389344.1;locus_tag=NM058_14050;product=dihydrolipoyl dehydrogenase;protein_id=UTX04234.1;transl_table=11 CP101611.1 Genbank pseudogene 2702384 2703713 . - . ID=gene-NM058_14055;Name=pdhC;gbkey=Gene;gene=pdhC;gene_biotype=pseudogene;locus_tag=NM058_14055;pseudo=true CP101611.1 Protein Homology CDS 2702384 2703713 . - 0 ID=cds-NM058_14055;Parent=gene-NM058_14055;Note=frameshifted;gbkey=CDS;gene=pdhC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389343.1;locus_tag=NM058_14055;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2703827 2704804 . - . ID=gene-NM058_14060;Name=pdhB;gbkey=Gene;gene=pdhB;gene_biotype=protein_coding;locus_tag=NM058_14060 CP101611.1 Protein Homology CDS 2703827 2704804 . - 0 ID=cds-UTX04235.1;Parent=gene-NM058_14060;Dbxref=NCBI_GP:UTX04235.1;Name=UTX04235.1;gbkey=CDS;gene=pdhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389342.1;locus_tag=NM058_14060;product=pyruvate dehydrogenase complex E1 component subunit beta;protein_id=UTX04235.1;transl_table=11 CP101611.1 Genbank gene 2704808 2705923 . - . ID=gene-NM058_14065;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=NM058_14065 CP101611.1 Protein Homology CDS 2704808 2705923 . - 0 ID=cds-UTX04236.1;Parent=gene-NM058_14065;Dbxref=NCBI_GP:UTX04236.1;Name=UTX04236.1;Ontology_term=GO:0006086,GO:0004739,GO:0045250;gbkey=CDS;gene=pdhA;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389341.1;locus_tag=NM058_14065;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=UTX04236.1;transl_table=11 CP101611.1 Genbank gene 2706345 2707016 . - . ID=gene-NM058_14070;Name=NM058_14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14070 CP101611.1 Protein Homology CDS 2706345 2707016 . - 0 ID=cds-UTX04237.1;Parent=gene-NM058_14070;Dbxref=NCBI_GP:UTX04237.1;Name=UTX04237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389340.2;locus_tag=NM058_14070;product=YkyA family protein;protein_id=UTX04237.1;transl_table=11 CP101611.1 Genbank gene 2707230 2707379 . + . ID=gene-NM058_14075;Name=NM058_14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14075 CP101611.1 Protein Homology CDS 2707230 2707379 . + 0 ID=cds-UTX04238.1;Parent=gene-NM058_14075;Dbxref=NCBI_GP:UTX04238.1;Name=UTX04238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097725.1;locus_tag=NM058_14075;product=YjcZ family sporulation protein;protein_id=UTX04238.1;transl_table=11 CP101611.1 Genbank gene 2707488 2708042 . + . ID=gene-NM058_14080;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=NM058_14080 CP101611.1 Protein Homology CDS 2707488 2708042 . + 0 ID=cds-UTX04239.1;Parent=gene-NM058_14080;Dbxref=NCBI_GP:UTX04239.1;Name=UTX04239.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389339.1;locus_tag=NM058_14080;product=peptide deformylase;protein_id=UTX04239.1;transl_table=11 CP101611.1 Genbank pseudogene 2708084 2708858 . - . ID=gene-NM058_14085;Name=NM058_14085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14085;pseudo=true CP101611.1 Protein Homology CDS 2708084 2708858 . - 0 ID=cds-NM058_14085;Parent=gene-NM058_14085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389338.1;locus_tag=NM058_14085;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2709241 2709450 . + . ID=gene-NM058_14090;Name=rnpZA;gbkey=Gene;gene=rnpZA;gene_biotype=protein_coding;locus_tag=NM058_14090 CP101611.1 Protein Homology CDS 2709241 2709450 . + 0 ID=cds-UTX04240.1;Parent=gene-NM058_14090;Dbxref=NCBI_GP:UTX04240.1;Name=UTX04240.1;gbkey=CDS;gene=rnpZA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389337.1;locus_tag=NM058_14090;product=RNA polymerase subunit omega 1;protein_id=UTX04240.1;transl_table=11 CP101611.1 Genbank gene 2709456 2711123 . + . ID=gene-NM058_14095;Name=rnjA;gbkey=Gene;gene=rnjA;gene_biotype=protein_coding;locus_tag=NM058_14095 CP101611.1 Protein Homology CDS 2709456 2711123 . + 0 ID=cds-UTX04241.1;Parent=gene-NM058_14095;Dbxref=NCBI_GP:UTX04241.1;Name=UTX04241.1;Ontology_term=GO:0006364,GO:0006397,GO:0004534;gbkey=CDS;gene=rnjA;go_function=5'-3' exoribonuclease activity|0004534||IEA;go_process=rRNA processing|0006364||IEA,mRNA processing|0006397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389336.1;locus_tag=NM058_14095;product=ribonuclease J1;protein_id=UTX04241.1;transl_table=11 CP101611.1 Genbank gene 2711360 2713093 . - . ID=gene-NM058_14100;Name=ade;gbkey=Gene;gene=ade;gene_biotype=protein_coding;locus_tag=NM058_14100 CP101611.1 Protein Homology CDS 2711360 2713093 . - 0 ID=cds-UTX04242.1;Parent=gene-NM058_14100;Dbxref=NCBI_GP:UTX04242.1;Name=UTX04242.1;Ontology_term=GO:0006168,GO:0000034;gbkey=CDS;gene=ade;go_function=adenine deaminase activity|0000034||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389335.2;locus_tag=NM058_14100;product=adenine deaminase;protein_id=UTX04242.1;transl_table=11 CP101611.1 Genbank gene 2713251 2713916 . - . ID=gene-NM058_14105;Name=ktrC;gbkey=Gene;gene=ktrC;gene_biotype=protein_coding;locus_tag=NM058_14105 CP101611.1 Protein Homology CDS 2713251 2713916 . - 0 ID=cds-UTX04243.1;Parent=gene-NM058_14105;Dbxref=NCBI_GP:UTX04243.1;Name=UTX04243.1;gbkey=CDS;gene=ktrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389334.1;locus_tag=NM058_14105;product=Ktr system potassium transporter KtrC;protein_id=UTX04243.1;transl_table=11 CP101611.1 Genbank gene 2713988 2714815 . - . ID=gene-NM058_14110;Name=NM058_14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14110 CP101611.1 Protein Homology CDS 2713988 2714815 . - 0 ID=cds-UTX04244.1;Parent=gene-NM058_14110;Dbxref=NCBI_GP:UTX04244.1;Name=UTX04244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389333.1;locus_tag=NM058_14110;product=gamma-glutamylcyclotransferase;protein_id=UTX04244.1;transl_table=11 CP101611.1 Genbank gene 2714831 2716117 . - . ID=gene-NM058_14115;Name=kinC;gbkey=Gene;gene=kinC;gene_biotype=protein_coding;locus_tag=NM058_14115 CP101611.1 Protein Homology CDS 2714831 2716117 . - 0 ID=cds-UTX04245.1;Parent=gene-NM058_14115;Dbxref=NCBI_GP:UTX04245.1;Name=UTX04245.1;gbkey=CDS;gene=kinC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389332.1;locus_tag=NM058_14115;product=two-component sensor histidine kinase KinC;protein_id=UTX04245.1;transl_table=11 CP101611.1 Genbank gene 2716310 2716588 . - . ID=gene-NM058_14120;Name=abhA;gbkey=Gene;gene=abhA;gene_biotype=protein_coding;locus_tag=NM058_14120 CP101611.1 Protein Homology CDS 2716310 2716588 . - 0 ID=cds-UTX04246.1;Parent=gene-NM058_14120;Dbxref=NCBI_GP:UTX04246.1;Name=UTX04246.1;gbkey=CDS;gene=abhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389331.1;locus_tag=NM058_14120;product=transcriptional regulator AbhA;protein_id=UTX04246.1;transl_table=11 CP101611.1 Genbank pseudogene 2716871 2717877 . + . ID=gene-NM058_14125;Name=mreBH;gbkey=Gene;gene=mreBH;gene_biotype=pseudogene;locus_tag=NM058_14125;pseudo=true CP101611.1 Protein Homology CDS 2716871 2717877 . + 0 ID=cds-NM058_14125;Parent=gene-NM058_14125;Note=frameshifted;gbkey=CDS;gene=mreBH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389330.1;locus_tag=NM058_14125;product=cell shape-determining protein MreBH;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2717977 2718111 . + . ID=gene-NM058_14130;Name=NM058_14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14130 CP101611.1 Protein Homology CDS 2717977 2718111 . + 0 ID=cds-UTX04247.1;Parent=gene-NM058_14130;Dbxref=NCBI_GP:UTX04247.1;Name=UTX04247.1;Note=YkpC%2C a protein of only 43 or 44 amino acids%2C is found broadly in the genus Bacillus.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389329.1;locus_tag=NM058_14130;product=protein YkpC;protein_id=UTX04247.1;transl_table=11 CP101611.1 Genbank pseudogene 2718223 2719454 . + . ID=gene-NM058_14135;Name=NM058_14135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14135;pseudo=true CP101611.1 Protein Homology CDS 2718223 2719454 . + 0 ID=cds-NM058_14135;Parent=gene-NM058_14135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389328.1;locus_tag=NM058_14135;product=aminopeptidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2719483 2720394 . - . ID=gene-NM058_14140;Name=NM058_14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14140 CP101611.1 Protein Homology CDS 2719483 2720394 . - 0 ID=cds-UTX04248.1;Parent=gene-NM058_14140;Dbxref=NCBI_GP:UTX04248.1;Name=UTX04248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389327.1;locus_tag=NM058_14140;product=ketopantoate reductase family protein;protein_id=UTX04248.1;transl_table=11 CP101611.1 Genbank gene 2720454 2722073 . - . ID=gene-NM058_14145;Name=NM058_14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14145 CP101611.1 Protein Homology CDS 2720454 2722073 . - 0 ID=cds-UTX04249.1;Parent=gene-NM058_14145;Dbxref=NCBI_GP:UTX04249.1;Name=UTX04249.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016936276.1;locus_tag=NM058_14145;product=ATP-binding cassette domain-containing protein;protein_id=UTX04249.1;transl_table=11 CP101611.1 Genbank gene 2722251 2722520 . + . ID=gene-NM058_14150;Name=NM058_14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14150 CP101611.1 Protein Homology CDS 2722251 2722520 . + 0 ID=cds-UTX04250.1;Parent=gene-NM058_14150;Dbxref=NCBI_GP:UTX04250.1;Name=UTX04250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019714260.1;locus_tag=NM058_14150;product=hypothetical protein;protein_id=UTX04250.1;transl_table=11 CP101611.1 Genbank gene 2722556 2723137 . - . ID=gene-NM058_14155;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=NM058_14155 CP101611.1 Protein Homology CDS 2722556 2723137 . - 0 ID=cds-UTX04251.1;Parent=gene-NM058_14155;Dbxref=NCBI_GP:UTX04251.1;Name=UTX04251.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389324.1;locus_tag=NM058_14155;product=signal peptidase I;protein_id=UTX04251.1;transl_table=11 CP101611.1 Genbank gene 2723280 2725187 . - . ID=gene-NM058_14160;Name=NM058_14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14160 CP101611.1 Protein Homology CDS 2723280 2725187 . - 0 ID=cds-UTX04252.1;Parent=gene-NM058_14160;Dbxref=NCBI_GP:UTX04252.1;Name=UTX04252.1;Ontology_term=GO:0009401,GO:0022877,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389323.1;locus_tag=NM058_14160;product=fructose-specific PTS transporter subunit EIIC;protein_id=UTX04252.1;transl_table=11 CP101611.1 Genbank gene 2725202 2726113 . - . ID=gene-NM058_14165;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=NM058_14165 CP101611.1 Protein Homology CDS 2725202 2726113 . - 0 ID=cds-UTX04253.1;Parent=gene-NM058_14165;Dbxref=NCBI_GP:UTX04253.1;Name=UTX04253.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389322.1;locus_tag=NM058_14165;product=1-phosphofructokinase;protein_id=UTX04253.1;transl_table=11 CP101611.1 Genbank gene 2726110 2726865 . - . ID=gene-NM058_14170;Name=NM058_14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14170 CP101611.1 Protein Homology CDS 2726110 2726865 . - 0 ID=cds-UTX04254.1;Parent=gene-NM058_14170;Dbxref=NCBI_GP:UTX04254.1;Name=UTX04254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389321.1;locus_tag=NM058_14170;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=UTX04254.1;transl_table=11 CP101611.1 Genbank gene 2727145 2728338 . - . ID=gene-NM058_14175;Name=skiZ;gbkey=Gene;gene=skiZ;gene_biotype=protein_coding;locus_tag=NM058_14175 CP101611.1 Protein Homology CDS 2727145 2728338 . - 0 ID=cds-UTX04255.1;Parent=gene-NM058_14175;Dbxref=NCBI_GP:UTX04255.1;Name=UTX04255.1;gbkey=CDS;gene=skiZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389320.1;locus_tag=NM058_14175;product=sporulation-delaying-protein transporter subunit SkiZ;protein_id=UTX04255.1;transl_table=11 CP101611.1 Genbank gene 2728335 2729027 . - . ID=gene-NM058_14180;Name=yknY;gbkey=Gene;gene=yknY;gene_biotype=protein_coding;locus_tag=NM058_14180 CP101611.1 Protein Homology CDS 2728335 2729027 . - 0 ID=cds-UTX04256.1;Parent=gene-NM058_14180;Dbxref=NCBI_GP:UTX04256.1;Name=UTX04256.1;gbkey=CDS;gene=yknY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389319.1;locus_tag=NM058_14180;product=ABC transporter ATP-binding protein YknY;protein_id=UTX04256.1;transl_table=11 CP101611.1 Genbank gene 2729028 2730161 . - . ID=gene-NM058_14185;Name=NM058_14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14185 CP101611.1 Protein Homology CDS 2729028 2730161 . - 0 ID=cds-UTX04257.1;Parent=gene-NM058_14185;Dbxref=NCBI_GP:UTX04257.1;Name=UTX04257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389318.1;locus_tag=NM058_14185;product=efflux RND transporter periplasmic adaptor subunit;protein_id=UTX04257.1;transl_table=11 CP101611.1 Genbank gene 2730166 2730861 . - . ID=gene-NM058_14190;Name=yknW;gbkey=Gene;gene=yknW;gene_biotype=protein_coding;locus_tag=NM058_14190 CP101611.1 Protein Homology CDS 2730166 2730861 . - 0 ID=cds-UTX04258.1;Parent=gene-NM058_14190;Dbxref=NCBI_GP:UTX04258.1;Name=UTX04258.1;gbkey=CDS;gene=yknW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389317.1;locus_tag=NM058_14190;product=toxin SDP protection protein YknW;protein_id=UTX04258.1;transl_table=11 CP101611.1 Genbank gene 2730976 2732790 . - . ID=gene-NM058_14195;Name=NM058_14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14195 CP101611.1 Protein Homology CDS 2730976 2732790 . - 0 ID=cds-UTX04259.1;Parent=gene-NM058_14195;Dbxref=NCBI_GP:UTX04259.1;Name=UTX04259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389316.1;locus_tag=NM058_14195;product=ABC transporter ATP-binding protein/permease;protein_id=UTX04259.1;transl_table=11 CP101611.1 Genbank gene 2732801 2734558 . - . ID=gene-NM058_14200;Name=NM058_14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14200 CP101611.1 Protein Homology CDS 2732801 2734558 . - 0 ID=cds-UTX04260.1;Parent=gene-NM058_14200;Dbxref=NCBI_GP:UTX04260.1;Name=UTX04260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389315.1;locus_tag=NM058_14200;product=ABC transporter ATP-binding protein/permease;protein_id=UTX04260.1;transl_table=11 CP101611.1 Genbank gene 2734780 2735013 . - . ID=gene-NM058_14205;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=NM058_14205 CP101611.1 Protein Homology CDS 2734780 2735013 . - 0 ID=cds-UTX04261.1;Parent=gene-NM058_14205;Dbxref=NCBI_GP:UTX04261.1;Name=UTX04261.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389314.1;locus_tag=NM058_14205;product=molybdopterin converting factor subunit 1;protein_id=UTX04261.1;transl_table=11 CP101611.1 Genbank gene 2735006 2735479 . - . ID=gene-NM058_14210;Name=NM058_14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14210 CP101611.1 Protein Homology CDS 2735006 2735479 . - 0 ID=cds-UTX04262.1;Parent=gene-NM058_14210;Dbxref=NCBI_GP:UTX04262.1;Name=UTX04262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389313.1;locus_tag=NM058_14210;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=UTX04262.1;transl_table=11 CP101611.1 Genbank gene 2735479 2736000 . - . ID=gene-NM058_14215;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=NM058_14215 CP101611.1 Protein Homology CDS 2735479 2736000 . - 0 ID=cds-UTX04263.1;Parent=gene-NM058_14215;Dbxref=NCBI_GP:UTX04263.1;Name=UTX04263.1;Ontology_term=GO:0006777,GO:0003824,GO:0005525;gbkey=CDS;gene=mobB;go_function=catalytic activity|0003824||IEA,GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389312.1;locus_tag=NM058_14215;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=UTX04263.1;transl_table=11 CP101611.1 Genbank gene 2735961 2737253 . - . ID=gene-NM058_14220;Name=NM058_14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14220 CP101611.1 Protein Homology CDS 2735961 2737253 . - 0 ID=cds-UTX04264.1;Parent=gene-NM058_14220;Dbxref=NCBI_GP:UTX04264.1;Name=UTX04264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389311.1;locus_tag=NM058_14220;product=molybdopterin molybdotransferase MoeA;protein_id=UTX04264.1;transl_table=11 CP101611.1 Genbank pseudogene 2737271 2738288 . - . ID=gene-NM058_14225;Name=NM058_14225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14225;pseudo=true CP101611.1 Protein Homology CDS 2737271 2738288 . - 0 ID=cds-NM058_14225;Parent=gene-NM058_14225;Note=frameshifted;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389310.1;locus_tag=NM058_14225;product=MoeB/ThiF family adenylyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2738339 2738938 . - . ID=gene-NM058_14230;Name=NM058_14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14230 CP101611.1 Protein Homology CDS 2738339 2738938 . - 0 ID=cds-UTX04265.1;Parent=gene-NM058_14230;Dbxref=NCBI_GP:UTX04265.1;Name=UTX04265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389309.1;locus_tag=NM058_14230;product=molybdenum cofactor guanylyltransferase;protein_id=UTX04265.1;transl_table=11 CP101611.1 Genbank gene 2739074 2740039 . + . ID=gene-NM058_14235;Name=NM058_14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14235 CP101611.1 Protein Homology CDS 2739074 2740039 . + 0 ID=cds-UTX04266.1;Parent=gene-NM058_14235;Dbxref=NCBI_GP:UTX04266.1;Name=UTX04266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389308.1;locus_tag=NM058_14235;product=sporulation protein;protein_id=UTX04266.1;transl_table=11 CP101611.1 Genbank gene 2740081 2740665 . - . ID=gene-NM058_14240;Name=rok;gbkey=Gene;gene=rok;gene_biotype=protein_coding;locus_tag=NM058_14240 CP101611.1 Protein Homology CDS 2740081 2740665 . - 0 ID=cds-UTX04267.1;Parent=gene-NM058_14240;Dbxref=NCBI_GP:UTX04267.1;Name=UTX04267.1;gbkey=CDS;gene=rok;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003238902.1;locus_tag=NM058_14240;product=transcriptional regulator Rok;protein_id=UTX04267.1;transl_table=11 CP101611.1 Genbank gene 2741118 2741576 . - . ID=gene-NM058_14245;Name=NM058_14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14245 CP101611.1 Protein Homology CDS 2741118 2741576 . - 0 ID=cds-UTX04268.1;Parent=gene-NM058_14245;Dbxref=NCBI_GP:UTX04268.1;Name=UTX04268.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014113626.1;locus_tag=NM058_14245;product=redoxin domain-containing protein;protein_id=UTX04268.1;transl_table=11 CP101611.1 Genbank gene 2741646 2742188 . - . ID=gene-NM058_14250;Name=ahpA;gbkey=Gene;gene=ahpA;gene_biotype=protein_coding;locus_tag=NM058_14250 CP101611.1 Protein Homology CDS 2741646 2742188 . - 0 ID=cds-UTX04269.1;Parent=gene-NM058_14250;Dbxref=NCBI_GP:UTX04269.1;Name=UTX04269.1;gbkey=CDS;gene=ahpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389305.1;locus_tag=NM058_14250;product=biofilm-specific peroxidase AhpA;protein_id=UTX04269.1;transl_table=11 CP101611.1 Genbank gene 2742432 2743235 . + . ID=gene-NM058_14255;Name=mscT;gbkey=Gene;gene=mscT;gene_biotype=protein_coding;gene_synonym=ykuT;locus_tag=NM058_14255 CP101611.1 Protein Homology CDS 2742432 2743235 . + 0 ID=cds-UTX04270.1;Parent=gene-NM058_14255;Dbxref=NCBI_GP:UTX04270.1;Name=UTX04270.1;gbkey=CDS;gene=mscT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389304.2;locus_tag=NM058_14255;product=small-conductance mechanosensitive channel protein MscT;protein_id=UTX04270.1;transl_table=11 CP101611.1 Genbank gene 2743272 2743517 . - . ID=gene-NM058_14260;Name=NM058_14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14260 CP101611.1 Protein Homology CDS 2743272 2743517 . - 0 ID=cds-UTX04271.1;Parent=gene-NM058_14260;Dbxref=NCBI_GP:UTX04271.1;Name=UTX04271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389303.1;locus_tag=NM058_14260;product=YkuS family protein;protein_id=UTX04271.1;transl_table=11 CP101611.1 Genbank pseudogene 2743578 2744703 . - . ID=gene-NM058_14265;Name=NM058_14265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14265;pseudo=true CP101611.1 Protein Homology CDS 2743578 2744703 . - 0 ID=cds-NM058_14265;Parent=gene-NM058_14265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389302.1;locus_tag=NM058_14265;product=N-acetyldiaminopimelate deacetylase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2744773 2745483 . - . ID=gene-NM058_14270;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=NM058_14270 CP101611.1 Protein Homology CDS 2744773 2745483 . - 0 ID=cds-UTX04272.1;Parent=gene-NM058_14270;Dbxref=NCBI_GP:UTX04272.1;Name=UTX04272.1;Ontology_term=GO:0009089,GO:0047200;gbkey=CDS;gene=dapD;go_function=tetrahydrodipicolinate N-acetyltransferase activity|0047200||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389301.2;locus_tag=NM058_14270;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=UTX04272.1;transl_table=11 CP101611.1 Genbank gene 2745587 2746042 . - . ID=gene-NM058_14275;Name=NM058_14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14275 CP101611.1 Protein Homology CDS 2745587 2746042 . - 0 ID=cds-UTX04273.1;Parent=gene-NM058_14275;Dbxref=NCBI_GP:UTX04273.1;Name=UTX04273.1;Ontology_term=GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389300.2;locus_tag=NM058_14275;product=flavodoxin;protein_id=UTX04273.1;transl_table=11 CP101611.1 Genbank gene 2746058 2746951 . - . ID=gene-NM058_14280;Name=NM058_14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14280 CP101611.1 Protein Homology CDS 2746058 2746951 . - 0 ID=cds-UTX04274.1;Parent=gene-NM058_14280;Dbxref=NCBI_GP:UTX04274.1;Name=UTX04274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389299.1;locus_tag=NM058_14280;product=exo-alpha-sialidase;protein_id=UTX04274.1;transl_table=11 CP101611.1 Genbank gene 2746941 2747417 . - . ID=gene-NM058_14285;Name=NM058_14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14285 CP101611.1 Protein Homology CDS 2746941 2747417 . - 0 ID=cds-UTX04275.1;Parent=gene-NM058_14285;Dbxref=NCBI_GP:UTX04275.1;Name=UTX04275.1;Ontology_term=GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389298.1;locus_tag=NM058_14285;product=flavodoxin;protein_id=UTX04275.1;transl_table=11 CP101611.1 Genbank gene 2747528 2748409 . - . ID=gene-NM058_14290;Name=ccpC;gbkey=Gene;gene=ccpC;gene_biotype=protein_coding;locus_tag=NM058_14290 CP101611.1 Protein Homology CDS 2747528 2748409 . - 0 ID=cds-UTX04276.1;Parent=gene-NM058_14290;Dbxref=NCBI_GP:UTX04276.1;Name=UTX04276.1;gbkey=CDS;gene=ccpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389297.1;locus_tag=NM058_14290;product=transcriptional regulator CcpC;protein_id=UTX04276.1;transl_table=11 CP101611.1 Genbank gene 2748556 2748999 . - . ID=gene-NM058_14295;Name=NM058_14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14295 CP101611.1 Protein Homology CDS 2748556 2748999 . - 0 ID=cds-UTX04277.1;Parent=gene-NM058_14295;Dbxref=NCBI_GP:UTX04277.1;Name=UTX04277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389296.1;locus_tag=NM058_14295;product=CBS domain-containing protein;protein_id=UTX04277.1;transl_table=11 CP101611.1 Genbank gene 2749138 2749335 . - . ID=gene-NM058_14300;Name=abbA;gbkey=Gene;gene=abbA;gene_biotype=protein_coding;gene_synonym=ykzF;locus_tag=NM058_14300 CP101611.1 Protein Homology CDS 2749138 2749335 . - 0 ID=cds-UTX04278.1;Parent=gene-NM058_14300;Dbxref=NCBI_GP:UTX04278.1;Name=UTX04278.1;gbkey=CDS;gene=abbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389295.1;locus_tag=NM058_14300;product=AbrB antirepressor AbbA;protein_id=UTX04278.1;transl_table=11 CP101611.1 Genbank gene 2749469 2749987 . - . ID=gene-NM058_14305;Name=NM058_14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14305 CP101611.1 Protein Homology CDS 2749469 2749987 . - 0 ID=cds-UTX04279.1;Parent=gene-NM058_14305;Dbxref=NCBI_GP:UTX04279.1;Name=UTX04279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389294.1;locus_tag=NM058_14305;product=ribonuclease H-like YkuK family protein;protein_id=UTX04279.1;transl_table=11 CP101611.1 Genbank pseudogene 2750098 2750336 . - . ID=gene-NM058_14310;Name=NM058_14310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14310;pseudo=true CP101611.1 Protein Homology CDS 2750098 2750336 . - 0 ID=cds-NM058_14310;Parent=gene-NM058_14310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389293.1;locus_tag=NM058_14310;product=DUF1797 family protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2750606 2750824 . - . ID=gene-NM058_14315;Name=NM058_14315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14315;pseudo=true CP101611.1 Protein Homology CDS 2750606 2750824 . - 0 ID=cds-NM058_14315;Parent=gene-NM058_14315;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009790895.1;locus_tag=NM058_14315;product=manganese catalase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2751052 2752275 . - . ID=gene-NM058_14320;Name=NM058_14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14320 CP101611.1 Protein Homology CDS 2751052 2752275 . - 0 ID=cds-UTX04280.1;Parent=gene-NM058_14320;Dbxref=NCBI_GP:UTX04280.1;Name=UTX04280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389292.1;locus_tag=NM058_14320;product=EAL domain-containing protein;protein_id=UTX04280.1;transl_table=11 CP101611.1 Genbank gene 2752339 2753103 . - . ID=gene-NM058_14325;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=NM058_14325 CP101611.1 Protein Homology CDS 2752339 2753103 . - 0 ID=cds-UTX04281.1;Parent=gene-NM058_14325;Dbxref=NCBI_GP:UTX04281.1;Name=UTX04281.1;Ontology_term=GO:0009062,GO:0008670;gbkey=CDS;gene=fadH;go_function=2%2C4-dienoyl-CoA reductase (NADPH) activity|0008670||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389289.1;locus_tag=NM058_14325;product=2%2C4-dienoyl-CoA reductase;protein_id=UTX04281.1;transl_table=11 CP101611.1 Genbank pseudogene 2753246 2754105 . + . ID=gene-NM058_14330;Name=NM058_14330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14330;pseudo=true CP101611.1 Protein Homology CDS 2753246 2754105 . + 0 ID=cds-NM058_14330;Parent=gene-NM058_14330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389288.2;locus_tag=NM058_14330;product=metallophosphoesterase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2754162 2754656 . + . ID=gene-NM058_14335;Name=NM058_14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14335 CP101611.1 Protein Homology CDS 2754162 2754656 . + 0 ID=cds-UTX07055.1;Parent=gene-NM058_14335;Dbxref=NCBI_GP:UTX07055.1;Name=UTX07055.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389287.1;locus_tag=NM058_14335;product=L%2CD-transpeptidase family protein;protein_id=UTX07055.1;transl_table=11 CP101611.1 Genbank pseudogene 2754732 2756025 . + . ID=gene-NM058_14340;Name=NM058_14340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14340;pseudo=true CP101611.1 Protein Homology CDS 2754732 2756025 . + 0 ID=cds-NM058_14340;Parent=gene-NM058_14340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389286.2;locus_tag=NM058_14340;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2756151 2756615 . + . ID=gene-NM058_14345;Name=NM058_14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14345 CP101611.1 Protein Homology CDS 2756151 2756615 . + 0 ID=cds-UTX04282.1;Parent=gene-NM058_14345;Dbxref=NCBI_GP:UTX04282.1;Name=UTX04282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389285.1;locus_tag=NM058_14345;product=YkyB family protein;protein_id=UTX04282.1;transl_table=11 CP101611.1 Genbank gene 2756657 2757568 . - . ID=gene-NM058_14350;Name=cheV;gbkey=Gene;gene=cheV;gene_biotype=protein_coding;locus_tag=NM058_14350 CP101611.1 Protein Homology CDS 2756657 2757568 . - 0 ID=cds-UTX04283.1;Parent=gene-NM058_14350;Dbxref=NCBI_GP:UTX04283.1;Name=UTX04283.1;gbkey=CDS;gene=cheV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389284.1;locus_tag=NM058_14350;product=chemotaxis protein CheV;protein_id=UTX04283.1;transl_table=11 CP101611.1 Genbank gene 2757775 2757936 . + . ID=gene-NM058_14355;Name=NM058_14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14355 CP101611.1 Protein Homology CDS 2757775 2757936 . + 0 ID=cds-UTX04284.1;Parent=gene-NM058_14355;Dbxref=NCBI_GP:UTX04284.1;Name=UTX04284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097722.1;locus_tag=NM058_14355;product=hypothetical protein;protein_id=UTX04284.1;transl_table=11 CP101611.1 Genbank gene 2758137 2759318 . + . ID=gene-NM058_14360;Name=NM058_14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14360 CP101611.1 Protein Homology CDS 2758137 2759318 . + 0 ID=cds-UTX04285.1;Parent=gene-NM058_14360;Dbxref=NCBI_GP:UTX04285.1;Name=UTX04285.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389283.2;locus_tag=NM058_14360;product=aminotransferase A;protein_id=UTX04285.1;transl_table=11 CP101611.1 Genbank gene 2759315 2761144 . - . ID=gene-NM058_14365;Name=kinA;gbkey=Gene;gene=kinA;gene_biotype=protein_coding;locus_tag=NM058_14365 CP101611.1 Protein Homology CDS 2759315 2761144 . - 0 ID=cds-UTX04286.1;Parent=gene-NM058_14365;Dbxref=NCBI_GP:UTX04286.1;Name=UTX04286.1;gbkey=CDS;gene=kinA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014479653.1;locus_tag=NM058_14365;product=sporulation kinase KinA;protein_id=UTX04286.1;transl_table=11 CP101611.1 Genbank pseudogene 2761308 2763421 . - . ID=gene-NM058_14370;Name=NM058_14370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14370;pseudo=true CP101611.1 Protein Homology CDS 2761308 2763421 . - 0 ID=cds-NM058_14370;Parent=gene-NM058_14370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389281.2;locus_tag=NM058_14370;product=penicillin-binding protein 2;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2763760 2764569 . + . ID=gene-NM058_14375;Name=NM058_14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14375 CP101611.1 Protein Homology CDS 2763760 2764569 . + 0 ID=cds-UTX04287.1;Parent=gene-NM058_14375;Dbxref=NCBI_GP:UTX04287.1;Name=UTX04287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389280.2;locus_tag=NM058_14375;product=CAP domain-containing protein;protein_id=UTX04287.1;transl_table=11 CP101611.1 Genbank gene 2765092 2765982 . - . ID=gene-NM058_14380;Name=NM058_14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14380 CP101611.1 Protein Homology CDS 2765092 2765982 . - 0 ID=cds-UTX04288.1;Parent=gene-NM058_14380;Dbxref=NCBI_GP:UTX04288.1;Name=UTX04288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489341.1;locus_tag=NM058_14380;product=Virginiamycin B lyase;protein_id=UTX04288.1;transl_table=11 CP101611.1 Genbank gene 2766575 2767441 . - . ID=gene-NM058_14385;Name=NM058_14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14385 CP101611.1 Protein Homology CDS 2766575 2767441 . - 0 ID=cds-UTX04289.1;Parent=gene-NM058_14385;Dbxref=NCBI_GP:UTX04289.1;Name=UTX04289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389279.1;locus_tag=NM058_14385;product=NAD(P)-dependent oxidoreductase;protein_id=UTX04289.1;transl_table=11 CP101611.1 Genbank gene 2767590 2769557 . - . ID=gene-NM058_14390;Name=mcpC;gbkey=Gene;gene=mcpC;gene_biotype=protein_coding;locus_tag=NM058_14390 CP101611.1 Protein Homology CDS 2767590 2769557 . - 0 ID=cds-UTX04290.1;Parent=gene-NM058_14390;Dbxref=NCBI_GP:UTX04290.1;Name=UTX04290.1;gbkey=CDS;gene=mcpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389278.2;locus_tag=NM058_14390;product=methyl-accepting chemotaxis protein McpC;protein_id=UTX04290.1;transl_table=11 CP101611.1 Genbank pseudogene 2769691 2770391 . + . ID=gene-NM058_14395;Name=NM058_14395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14395;pseudo=true CP101611.1 Protein Homology CDS 2769691 2770391 . + 0 ID=cds-NM058_14395;Parent=gene-NM058_14395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003238957.1;locus_tag=NM058_14395;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2770384 2771412 . - . ID=gene-NM058_14400;Name=splB;gbkey=Gene;gene=splB;gene_biotype=protein_coding;locus_tag=NM058_14400 CP101611.1 Protein Homology CDS 2770384 2771412 . - 0 ID=cds-UTX04291.1;Parent=gene-NM058_14400;Dbxref=NCBI_GP:UTX04291.1;Name=UTX04291.1;Ontology_term=GO:0006290,GO:0046500,GO:0016830,GO:0051539;gbkey=CDS;gene=splB;go_function=carbon-carbon lyase activity|0016830||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=pyrimidine dimer repair|0006290||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389276.1;locus_tag=NM058_14400;product=spore photoproduct lyase;protein_id=UTX04291.1;transl_table=11 CP101611.1 Genbank gene 2771490 2771729 . - . ID=gene-NM058_14405;Name=splA;gbkey=Gene;gene=splA;gene_biotype=protein_coding;locus_tag=NM058_14405 CP101611.1 Protein Homology CDS 2771490 2771729 . - 0 ID=cds-UTX04292.1;Parent=gene-NM058_14405;Dbxref=NCBI_GP:UTX04292.1;Name=UTX04292.1;gbkey=CDS;gene=splA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389275.1;locus_tag=NM058_14405;product=splAB operon transcriptional regulator SplA;protein_id=UTX04292.1;transl_table=11 CP101611.1 Genbank gene 2771820 2773532 . - . ID=gene-NM058_14410;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=NM058_14410 CP101611.1 Protein Homology CDS 2771820 2773532 . - 0 ID=cds-UTX04293.1;Parent=gene-NM058_14410;Dbxref=NCBI_GP:UTX04293.1;Name=UTX04293.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389274.2;locus_tag=NM058_14410;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=UTX04293.1;transl_table=11 CP101611.1 Genbank gene 2773532 2773798 . - . ID=gene-NM058_14415;Name=NM058_14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14415 CP101611.1 Protein Homology CDS 2773532 2773798 . - 0 ID=cds-UTX04294.1;Parent=gene-NM058_14415;Dbxref=NCBI_GP:UTX04294.1;Name=UTX04294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389273.1;locus_tag=NM058_14415;product=phosphocarrier protein HPr;protein_id=UTX04294.1;transl_table=11 CP101611.1 Genbank gene 2773896 2775995 . - . ID=gene-NM058_14420;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=NM058_14420 CP101611.1 Protein Homology CDS 2773896 2775995 . - 0 ID=cds-UTX04295.1;Parent=gene-NM058_14420;Dbxref=NCBI_GP:UTX04295.1;Name=UTX04295.1;gbkey=CDS;gene=ptsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389272.1;locus_tag=NM058_14420;product=PTS glucose transporter subunit IIABC;protein_id=UTX04295.1;transl_table=11 CP101611.1 Genbank pseudogene 2776225 2777071 . - . ID=gene-NM058_14425;Name=glcT;gbkey=Gene;gene=glcT;gene_biotype=pseudogene;locus_tag=NM058_14425;pseudo=true CP101611.1 Protein Homology CDS 2776225 2777071 . - 0 ID=cds-NM058_14425;Parent=gene-NM058_14425;Note=frameshifted;gbkey=CDS;gene=glcT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003245651.1;locus_tag=NM058_14425;product=ptsGHI operon transcription antiterminator GlcT;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2777156 2778121 . - . ID=gene-NM058_14430;Name=NM058_14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14430 CP101611.1 Protein Homology CDS 2777156 2778121 . - 0 ID=cds-UTX04296.1;Parent=gene-NM058_14430;Dbxref=NCBI_GP:UTX04296.1;Name=UTX04296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389270.1;locus_tag=NM058_14430;product=LacI family DNA-binding transcriptional regulator;protein_id=UTX04296.1;transl_table=11 CP101611.1 Genbank gene 2778403 2779497 . - . ID=gene-NM058_14435;Name=papB;gbkey=Gene;gene=papB;gene_biotype=protein_coding;locus_tag=NM058_14435 CP101611.1 Protein Homology CDS 2778403 2779497 . - 0 ID=cds-UTX04297.1;Parent=gene-NM058_14435;Dbxref=NCBI_GP:UTX04297.1;Name=UTX04297.1;gbkey=CDS;gene=papB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019714207.1;locus_tag=NM058_14435;product=di/tri-peptidase;protein_id=UTX04297.1;transl_table=11 CP101611.1 Genbank gene 2779662 2779865 . + . ID=gene-NM058_14440;Name=NM058_14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14440 CP101611.1 Protein Homology CDS 2779662 2779865 . + 0 ID=cds-UTX04298.1;Parent=gene-NM058_14440;Dbxref=NCBI_GP:UTX04298.1;Name=UTX04298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003245332.1;locus_tag=NM058_14440;product=hypothetical protein;protein_id=UTX04298.1;transl_table=11 CP101611.1 Genbank gene 2779903 2781816 . - . ID=gene-NM058_14445;Name=pfeT;gbkey=Gene;gene=pfeT;gene_biotype=protein_coding;locus_tag=NM058_14445 CP101611.1 Protein Homology CDS 2779903 2781816 . - 0 ID=cds-UTX04299.1;Parent=gene-NM058_14445;Dbxref=NCBI_GP:UTX04299.1;Name=UTX04299.1;gbkey=CDS;gene=pfeT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389268.1;locus_tag=NM058_14445;product=metal-transporting ATPase PfeT;protein_id=UTX04299.1;transl_table=11 CP101611.1 Genbank gene 2782056 2782553 . - . ID=gene-NM058_14450;Name=NM058_14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14450 CP101611.1 Protein Homology CDS 2782056 2782553 . - 0 ID=cds-UTX04300.1;Parent=gene-NM058_14450;Dbxref=NCBI_GP:UTX04300.1;Name=UTX04300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389267.1;locus_tag=NM058_14450;product=TlpA family protein disulfide reductase;protein_id=UTX04300.1;transl_table=11 CP101611.1 Genbank gene 2782604 2783941 . - . ID=gene-NM058_14455;Name=ykvU;gbkey=Gene;gene=ykvU;gene_biotype=protein_coding;locus_tag=NM058_14455 CP101611.1 Protein Homology CDS 2782604 2783941 . - 0 ID=cds-UTX04301.1;Parent=gene-NM058_14455;Dbxref=NCBI_GP:UTX04301.1;Name=UTX04301.1;gbkey=CDS;gene=ykvU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389266.1;locus_tag=NM058_14455;product=sporulation protein YkvU;protein_id=UTX04301.1;transl_table=11 CP101611.1 Genbank pseudogene 2784059 2784687 . - . ID=gene-NM058_14460;Name=NM058_14460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14460;pseudo=true CP101611.1 Protein Homology CDS 2784059 2784687 . - 0 ID=cds-NM058_14460;Parent=gene-NM058_14460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389265.1;locus_tag=NM058_14460;product=cell wall hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2784986 2785180 . - . ID=gene-NM058_14465;Name=NM058_14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14465 CP101611.1 Protein Homology CDS 2784986 2785180 . - 0 ID=cds-UTX04302.1;Parent=gene-NM058_14465;Dbxref=NCBI_GP:UTX04302.1;Name=UTX04302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097721.1;locus_tag=NM058_14465;product=hypothetical protein;protein_id=UTX04302.1;transl_table=11 CP101611.1 Genbank gene 2785345 2785530 . + . ID=gene-NM058_14470;Name=NM058_14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14470 CP101611.1 Protein Homology CDS 2785345 2785530 . + 0 ID=cds-UTX04303.1;Parent=gene-NM058_14470;Dbxref=NCBI_GP:UTX04303.1;Name=UTX04303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389264.2;locus_tag=NM058_14470;product=YkvS family protein;protein_id=UTX04303.1;transl_table=11 CP101611.1 Genbank gene 2785652 2785942 . - . ID=gene-NM058_14475;Name=NM058_14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14475 CP101611.1 Protein Homology CDS 2785652 2785942 . - 0 ID=cds-UTX04304.1;Parent=gene-NM058_14475;Dbxref=NCBI_GP:UTX04304.1;Name=UTX04304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389263.1;locus_tag=NM058_14475;product=YkvR family protein;protein_id=UTX04304.1;transl_table=11 CP101611.1 Genbank gene 2786227 2787162 . - . ID=gene-NM058_14480;Name=NM058_14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14480 CP101611.1 Protein Homology CDS 2786227 2787162 . - 0 ID=cds-UTX04305.1;Parent=gene-NM058_14480;Dbxref=NCBI_GP:UTX04305.1;Name=UTX04305.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013390533.1;locus_tag=NM058_14480;product=glycosyl hydrolase family 18 protein;protein_id=UTX04305.1;transl_table=11 CP101611.1 Genbank gene 2787260 2787487 . - . ID=gene-NM058_14485;Name=NM058_14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14485 CP101611.1 Protein Homology CDS 2787260 2787487 . - 0 ID=cds-UTX04306.1;Parent=gene-NM058_14485;Dbxref=NCBI_GP:UTX04306.1;Name=UTX04306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097719.1;locus_tag=NM058_14485;product=LysM peptidoglycan-binding domain-containing protein;protein_id=UTX04306.1;transl_table=11 CP101611.1 Genbank gene 2787503 2788702 . - . ID=gene-NM058_14490;Name=NM058_14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14490 CP101611.1 Protein Homology CDS 2787503 2788702 . - 0 ID=cds-UTX04307.1;Parent=gene-NM058_14490;Dbxref=NCBI_GP:UTX04307.1;Name=UTX04307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389261.1;locus_tag=NM058_14490;product=glycosyltransferase;protein_id=UTX04307.1;transl_table=11 CP101611.1 Genbank gene 2789019 2789516 . - . ID=gene-NM058_14495;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=NM058_14495 CP101611.1 Protein Homology CDS 2789019 2789516 . - 0 ID=cds-UTX04308.1;Parent=gene-NM058_14495;Dbxref=NCBI_GP:UTX04308.1;Name=UTX04308.1;Ontology_term=GO:0033739;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389258.1;locus_tag=NM058_14495;product=preQ(1) synthase;protein_id=UTX04308.1;transl_table=11 CP101611.1 Genbank pseudogene 2789534 2790264 . - . ID=gene-NM058_14500;Name=queE;gbkey=Gene;gene=queE;gene_biotype=pseudogene;locus_tag=NM058_14500;pseudo=true CP101611.1 Protein Homology CDS 2789534 2790264 . - 0 ID=cds-NM058_14500;Parent=gene-NM058_14500;Note=frameshifted;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389257.1;locus_tag=NM058_14500;product=7-carboxy-7-deazaguanine synthase QueE;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2790257 2790706 . - . ID=gene-NM058_14505;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=NM058_14505 CP101611.1 Protein Homology CDS 2790257 2790706 . - 0 ID=cds-UTX04309.1;Parent=gene-NM058_14505;Dbxref=NCBI_GP:UTX04309.1;Name=UTX04309.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389256.1;locus_tag=NM058_14505;product=6-carboxytetrahydropterin synthase QueD;protein_id=UTX04309.1;transl_table=11 CP101611.1 Genbank pseudogene 2790699 2791357 . - . ID=gene-NM058_14510;Name=queC;gbkey=Gene;gene=queC;gene_biotype=pseudogene;locus_tag=NM058_14510;pseudo=true CP101611.1 Protein Homology CDS 2790699 2791357 . - 0 ID=cds-NM058_14510;Parent=gene-NM058_14510;Note=frameshifted;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389255.1;locus_tag=NM058_14510;product=7-cyano-7-deazaguanine synthase QueC;pseudo=true;transl_table=11 CP101611.1 cmsearch riboswitch 2791488 2791532 . - . ID=id-CP101611.1:2791488..2791532;Dbxref=RFAM:RF00522;Note=PreQ1 riboswitch class I;bound_moiety=preQ1;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 2791673 2792716 . - . ID=gene-NM058_14515;Name=NM058_14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14515 CP101611.1 Protein Homology CDS 2791673 2792716 . - 0 ID=cds-UTX04310.1;Parent=gene-NM058_14515;Dbxref=NCBI_GP:UTX04310.1;Name=UTX04310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389254.1;locus_tag=NM058_14515;product=hypothetical protein;protein_id=UTX04310.1;transl_table=11 CP101611.1 Genbank gene 2793083 2795182 . + . ID=gene-NM058_14520;Name=clpE;gbkey=Gene;gene=clpE;gene_biotype=protein_coding;locus_tag=NM058_14520 CP101611.1 Protein Homology CDS 2793083 2795182 . + 0 ID=cds-UTX04311.1;Parent=gene-NM058_14520;Dbxref=NCBI_GP:UTX04311.1;Name=UTX04311.1;gbkey=CDS;gene=clpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389253.1;locus_tag=NM058_14520;product=ATP-dependent protease ATP-binding subunit ClpE;protein_id=UTX04311.1;transl_table=11 CP101611.1 Genbank gene 2795566 2796378 . + . ID=gene-NM058_14525;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=NM058_14525 CP101611.1 Protein Homology CDS 2795566 2796378 . + 0 ID=cds-UTX04312.1;Parent=gene-NM058_14525;Dbxref=NCBI_GP:UTX04312.1;Name=UTX04312.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389252.1;locus_tag=NM058_14525;product=flagellar motor stator protein MotA;protein_id=UTX04312.1;transl_table=11 CP101611.1 Genbank pseudogene 2796350 2797133 . + . ID=gene-NM058_14530;Name=motB;gbkey=Gene;gene=motB;gene_biotype=pseudogene;locus_tag=NM058_14530;pseudo=true CP101611.1 Protein Homology CDS 2796350 2797133 . + 0 ID=cds-NM058_14530;Parent=gene-NM058_14530;Note=frameshifted;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389251.1;locus_tag=NM058_14530;product=flagellar motor protein MotB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2797173 2797610 . - . ID=gene-NM058_14535;Name=mhqR;gbkey=Gene;gene=mhqR;gene_biotype=protein_coding;locus_tag=NM058_14535 CP101611.1 Protein Homology CDS 2797173 2797610 . - 0 ID=cds-UTX04313.1;Parent=gene-NM058_14535;Dbxref=NCBI_GP:UTX04313.1;Name=UTX04313.1;gbkey=CDS;gene=mhqR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389250.1;locus_tag=NM058_14535;product=MarR family transcriptional regulator MhqR;protein_id=UTX04313.1;transl_table=11 CP101611.1 Genbank gene 2797803 2799323 . + . ID=gene-NM058_14540;Name=kinD;gbkey=Gene;gene=kinD;gene_biotype=protein_coding;locus_tag=NM058_14540 CP101611.1 Protein Homology CDS 2797803 2799323 . + 0 ID=cds-UTX04314.1;Parent=gene-NM058_14540;Dbxref=NCBI_GP:UTX04314.1;Name=UTX04314.1;gbkey=CDS;gene=kinD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389249.1;locus_tag=NM058_14540;product=sporulation kinase KinD;protein_id=UTX04314.1;transl_table=11 CP101611.1 Genbank gene 2799351 2799782 . - . ID=gene-NM058_14545;Name=NM058_14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14545 CP101611.1 Protein Homology CDS 2799351 2799782 . - 0 ID=cds-UTX04315.1;Parent=gene-NM058_14545;Dbxref=NCBI_GP:UTX04315.1;Name=UTX04315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389248.1;locus_tag=NM058_14545;product=hypothetical protein;protein_id=UTX04315.1;transl_table=11 CP101611.1 Genbank gene 2799867 2800124 . - . ID=gene-NM058_14550;Name=spo0E;gbkey=Gene;gene=spo0E;gene_biotype=protein_coding;locus_tag=NM058_14550 CP101611.1 Protein Homology CDS 2799867 2800124 . - 0 ID=cds-UTX04316.1;Parent=gene-NM058_14550;Dbxref=NCBI_GP:UTX04316.1;Name=UTX04316.1;gbkey=CDS;gene=spo0E;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389247.1;locus_tag=NM058_14550;product=aspartyl-phosphate phosphatase Spo0E;protein_id=UTX04316.1;transl_table=11 CP101611.1 Genbank gene 2800327 2800647 . + . ID=gene-NM058_14555;Name=NM058_14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14555 CP101611.1 Protein Homology CDS 2800327 2800647 . + 0 ID=cds-UTX04317.1;Parent=gene-NM058_14555;Dbxref=NCBI_GP:UTX04317.1;Name=UTX04317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389246.1;locus_tag=NM058_14555;product=YkvA family protein;protein_id=UTX04317.1;transl_table=11 CP101611.1 Genbank gene 2800688 2801224 . - . ID=gene-NM058_14560;Name=mtnD;gbkey=Gene;gene=mtnD;gene_biotype=protein_coding;locus_tag=NM058_14560 CP101611.1 Protein Homology CDS 2800688 2801224 . - 0 ID=cds-UTX04318.1;Parent=gene-NM058_14560;Dbxref=NCBI_GP:UTX04318.1;Name=UTX04318.1;gbkey=CDS;gene=mtnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389245.1;locus_tag=NM058_14560;product=acireductone dioxygenase;protein_id=UTX04318.1;transl_table=11 CP101611.1 Genbank gene 2801239 2801868 . - . ID=gene-NM058_14565;Name=NM058_14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14565 CP101611.1 Protein Homology CDS 2801239 2801868 . - 0 ID=cds-UTX04319.1;Parent=gene-NM058_14565;Dbxref=NCBI_GP:UTX04319.1;Name=UTX04319.1;Ontology_term=GO:0019509;gbkey=CDS;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389244.1;locus_tag=NM058_14565;product=methylthioribulose 1-phosphate dehydratase;protein_id=UTX04319.1;transl_table=11 CP101611.1 Genbank gene 2801826 2802533 . - . ID=gene-NM058_14570;Name=mtnX;gbkey=Gene;gene=mtnX;gene_biotype=protein_coding;locus_tag=NM058_14570 CP101611.1 Protein Homology CDS 2801826 2802533 . - 0 ID=cds-UTX04320.1;Parent=gene-NM058_14570;Dbxref=NCBI_GP:UTX04320.1;Name=UTX04320.1;Ontology_term=GO:0019509,GO:0016791;gbkey=CDS;gene=mtnX;go_function=phosphatase activity|0016791||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389243.1;locus_tag=NM058_14570;product=2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase;protein_id=UTX04320.1;transl_table=11 CP101611.1 Genbank gene 2802530 2803747 . - . ID=gene-NM058_14575;Name=mtnW;gbkey=Gene;gene=mtnW;gene_biotype=protein_coding;locus_tag=NM058_14575 CP101611.1 Protein Homology CDS 2802530 2803747 . - 0 ID=cds-UTX04321.1;Parent=gene-NM058_14575;Dbxref=NCBI_GP:UTX04321.1;Name=UTX04321.1;Ontology_term=GO:0019509,GO:0016862;gbkey=CDS;gene=mtnW;go_function=intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389242.2;locus_tag=NM058_14575;product=2%2C3-diketo-5-methylthiopentyl-1-phosphate enolase;protein_id=UTX04321.1;transl_table=11 CP101611.1 cmsearch riboswitch 2803832 2803932 . - . ID=id-CP101611.1:2803832..2803932;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 2803974 2805167 . - . ID=gene-NM058_14580;Name=mtnE;gbkey=Gene;gene=mtnE;gene_biotype=protein_coding;locus_tag=NM058_14580 CP101611.1 Protein Homology CDS 2803974 2805167 . - 0 ID=cds-UTX04322.1;Parent=gene-NM058_14580;Dbxref=NCBI_GP:UTX04322.1;Name=UTX04322.1;gbkey=CDS;gene=mtnE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258231.1;locus_tag=NM058_14580;product=methionine-glutamine aminotransferase;protein_id=UTX04322.1;transl_table=11 CP101611.1 Genbank gene 2805262 2806041 . + . ID=gene-NM058_14585;Name=NM058_14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14585 CP101611.1 Protein Homology CDS 2805262 2806041 . + 0 ID=cds-UTX04323.1;Parent=gene-NM058_14585;Dbxref=NCBI_GP:UTX04323.1;Name=UTX04323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389240.1;locus_tag=NM058_14585;product=carbon-nitrogen family hydrolase;protein_id=UTX04323.1;transl_table=11 CP101611.1 cmsearch riboswitch 2806125 2806280 . + . ID=id-CP101611.1:2806125..2806280;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 2806384 2807577 . + . ID=gene-NM058_14590;Name=mtnK;gbkey=Gene;gene=mtnK;gene_biotype=protein_coding;locus_tag=NM058_14590 CP101611.1 Protein Homology CDS 2806384 2807577 . + 0 ID=cds-UTX04324.1;Parent=gene-NM058_14590;Dbxref=NCBI_GP:UTX04324.1;Name=UTX04324.1;Ontology_term=GO:0019509,GO:0046522;gbkey=CDS;gene=mtnK;go_function=S-methyl-5-thioribose kinase activity|0046522||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389239.2;locus_tag=NM058_14590;product=S-methyl-5-thioribose kinase;protein_id=UTX04324.1;transl_table=11 CP101611.1 Genbank gene 2807585 2808646 . + . ID=gene-NM058_14595;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=NM058_14595 CP101611.1 Protein Homology CDS 2807585 2808646 . + 0 ID=cds-UTX04325.1;Parent=gene-NM058_14595;Dbxref=NCBI_GP:UTX04325.1;Name=UTX04325.1;Ontology_term=GO:0019509,GO:0046523;gbkey=CDS;gene=mtnA;go_function=S-methyl-5-thioribose-1-phosphate isomerase activity|0046523||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389238.1;locus_tag=NM058_14595;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=UTX04325.1;transl_table=11 CP101611.1 Genbank gene 2808680 2808805 . - . ID=gene-NM058_14600;Name=NM058_14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14600 CP101611.1 Protein Homology CDS 2808680 2808805 . - 0 ID=cds-UTX04326.1;Parent=gene-NM058_14600;Dbxref=NCBI_GP:UTX04326.1;Name=UTX04326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513954.1;locus_tag=NM058_14600;product=hypothetical protein;protein_id=UTX04326.1;transl_table=11 CP101611.1 Genbank gene 2808895 2809392 . - . ID=gene-NM058_14605;Name=NM058_14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14605 CP101611.1 Protein Homology CDS 2808895 2809392 . - 0 ID=cds-UTX04327.1;Parent=gene-NM058_14605;Dbxref=NCBI_GP:UTX04327.1;Name=UTX04327.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389237.1;locus_tag=NM058_14605;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=UTX04327.1;transl_table=11 CP101611.1 Genbank gene 2809389 2811605 . - . ID=gene-NM058_14610;Name=kinE;gbkey=Gene;gene=kinE;gene_biotype=protein_coding;locus_tag=NM058_14610 CP101611.1 Protein Homology CDS 2809389 2811605 . - 0 ID=cds-UTX04328.1;Parent=gene-NM058_14610;Dbxref=NCBI_GP:UTX04328.1;Name=UTX04328.1;gbkey=CDS;gene=kinE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389236.1;locus_tag=NM058_14610;product=sporulation two-component system sensor histidine kinase KinE;protein_id=UTX04328.1;transl_table=11 CP101611.1 Genbank gene 2811858 2812880 . + . ID=gene-NM058_14615;Name=NM058_14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14615 CP101611.1 Protein Homology CDS 2811858 2812880 . + 0 ID=cds-UTX04329.1;Parent=gene-NM058_14615;Dbxref=NCBI_GP:UTX04329.1;Name=UTX04329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389235.1;locus_tag=NM058_14615;product=acyltransferase family protein;protein_id=UTX04329.1;transl_table=11 CP101611.1 Genbank gene 2812892 2813092 . - . ID=gene-NM058_14620;Name=NM058_14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14620 CP101611.1 Protein Homology CDS 2812892 2813092 . - 0 ID=cds-UTX07056.1;Parent=gene-NM058_14620;Dbxref=NCBI_GP:UTX07056.1;Name=UTX07056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015715779.1;locus_tag=NM058_14620;product=hypothetical protein;protein_id=UTX07056.1;transl_table=11 CP101611.1 Genbank gene 2813095 2813250 . - . ID=gene-NM058_14625;Name=NM058_14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14625 CP101611.1 Protein Homology CDS 2813095 2813250 . - 0 ID=cds-UTX04330.1;Parent=gene-NM058_14625;Dbxref=NCBI_GP:UTX04330.1;Name=UTX04330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097718.1;locus_tag=NM058_14625;product=hypothetical protein;protein_id=UTX04330.1;transl_table=11 CP101611.1 Genbank gene 2813401 2814750 . - . ID=gene-NM058_14630;Name=ktrD;gbkey=Gene;gene=ktrD;gene_biotype=protein_coding;locus_tag=NM058_14630 CP101611.1 Protein Homology CDS 2813401 2814750 . - 0 ID=cds-UTX04331.1;Parent=gene-NM058_14630;Dbxref=NCBI_GP:UTX04331.1;Name=UTX04331.1;gbkey=CDS;gene=ktrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389233.1;locus_tag=NM058_14630;product=Ktr system potassium transporter KtrD;protein_id=UTX04331.1;transl_table=11 CP101611.1 Genbank gene 2814913 2815809 . - . ID=gene-NM058_14635;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=NM058_14635 CP101611.1 Protein Homology CDS 2814913 2815809 . - 0 ID=cds-UTX04332.1;Parent=gene-NM058_14635;Dbxref=NCBI_GP:UTX04332.1;Name=UTX04332.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389232.1;locus_tag=NM058_14635;product=protease HtpX;protein_id=UTX04332.1;transl_table=11 CP101611.1 Genbank pseudogene 2815978 2816677 . + . ID=gene-NM058_14640;Name=htpK;gbkey=Gene;gene=htpK;gene_biotype=pseudogene;locus_tag=NM058_14640;pseudo=true CP101611.1 Protein Homology CDS 2815978 2816677 . + 0 ID=cds-NM058_14640;Parent=gene-NM058_14640;Note=frameshifted;gbkey=CDS;gene=htpK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389231.1;locus_tag=NM058_14640;product=transcriptional regulator HtpK;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2816799 2816993 . + . ID=gene-NM058_14645;Name=sspD;gbkey=Gene;gene=sspD;gene_biotype=protein_coding;locus_tag=NM058_14645 CP101611.1 Protein Homology CDS 2816799 2816993 . + 0 ID=cds-UTX04333.1;Parent=gene-NM058_14645;Dbxref=NCBI_GP:UTX04333.1;Name=UTX04333.1;Ontology_term=GO:0003690;gbkey=CDS;gene=sspD;go_function=double-stranded DNA binding|0003690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389230.1;locus_tag=NM058_14645;product=acid-soluble spore protein SspD;protein_id=UTX04333.1;transl_table=11 CP101611.1 Genbank pseudogene 2817004 2818148 . - . ID=gene-NM058_14650;Name=NM058_14650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14650;pseudo=true CP101611.1 Protein Homology CDS 2817004 2818148 . - 0 ID=cds-NM058_14650;Parent=gene-NM058_14650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389229.1;locus_tag=NM058_14650;product=anti-sigma factor domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2818145 2818900 . - . ID=gene-NM058_14655;Name=sigI;gbkey=Gene;gene=sigI;gene_biotype=protein_coding;locus_tag=NM058_14655 CP101611.1 Protein Homology CDS 2818145 2818900 . - 0 ID=cds-UTX04334.1;Parent=gene-NM058_14655;Dbxref=NCBI_GP:UTX04334.1;Name=UTX04334.1;gbkey=CDS;gene=sigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389228.1;locus_tag=NM058_14655;product=RNA polymerase sigma factor SigI;protein_id=UTX04334.1;transl_table=11 CP101611.1 Genbank gene 2819165 2820142 . - . ID=gene-NM058_14660;Name=NM058_14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14660 CP101611.1 Protein Homology CDS 2819165 2820142 . - 0 ID=cds-UTX04335.1;Parent=gene-NM058_14660;Dbxref=NCBI_GP:UTX04335.1;Name=UTX04335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389227.1;locus_tag=NM058_14660;product=TerC family protein;protein_id=UTX04335.1;transl_table=11 CP101611.1 Genbank gene 2820219 2820854 . - . ID=gene-NM058_14665;Name=NM058_14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14665 CP101611.1 Protein Homology CDS 2820219 2820854 . - 0 ID=cds-UTX04336.1;Parent=gene-NM058_14665;Dbxref=NCBI_GP:UTX04336.1;Name=UTX04336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017695077.1;locus_tag=NM058_14665;product=DedA family protein;protein_id=UTX04336.1;transl_table=11 CP101611.1 Genbank gene 2821070 2823472 . + . ID=gene-NM058_14670;Name=NM058_14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14670 CP101611.1 Protein Homology CDS 2821070 2823472 . + 0 ID=cds-UTX04337.1;Parent=gene-NM058_14670;Dbxref=NCBI_GP:UTX04337.1;Name=UTX04337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054577.2;locus_tag=NM058_14670;product=EAL domain-containing protein;protein_id=UTX04337.1;transl_table=11 CP101611.1 Genbank pseudogene 2823510 2824444 . + . ID=gene-NM058_14675;Name=NM058_14675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14675;pseudo=true CP101611.1 Protein Homology CDS 2823510 2824444 . + 0 ID=cds-NM058_14675;Parent=gene-NM058_14675;Note=frameshifted;Ontology_term=GO:0006303,GO:0045027;gbkey=CDS;go_function=DNA end binding|0045027||IEA;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389224.1;locus_tag=NM058_14675;product=Ku protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2824448 2826283 . + . ID=gene-NM058_14680;Name=NM058_14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14680 CP101611.1 Protein Homology CDS 2824448 2826283 . + 0 ID=cds-UTX04338.1;Parent=gene-NM058_14680;Dbxref=NCBI_GP:UTX04338.1;Name=UTX04338.1;Ontology_term=GO:0006281,GO:0003910,GO:0005524;gbkey=CDS;go_function=DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389223.1;locus_tag=NM058_14680;product=DNA ligase D;protein_id=UTX04338.1;transl_table=11 CP101611.1 Genbank pseudogene 2826307 2827319 . - . ID=gene-NM058_14685;Name=NM058_14685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14685;pseudo=true CP101611.1 Protein Homology CDS 2826307 2827319 . - 0 ID=cds-NM058_14685;Parent=gene-NM058_14685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389222.1;locus_tag=NM058_14685;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2827332 2829025 . - . ID=gene-NM058_14690;Name=NM058_14690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14690;pseudo=true CP101611.1 Protein Homology CDS 2827332 2829025 . - 0 ID=cds-NM058_14690;Parent=gene-NM058_14690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389221.1;locus_tag=NM058_14690;product=DUF6044 family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2829222 2830034 . + . ID=gene-NM058_14695;Name=NM058_14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14695 CP101611.1 Protein Homology CDS 2829222 2830034 . + 0 ID=cds-UTX04339.1;Parent=gene-NM058_14695;Dbxref=NCBI_GP:UTX04339.1;Name=UTX04339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389220.1;locus_tag=NM058_14695;product=metallophosphoesterase;protein_id=UTX04339.1;transl_table=11 CP101611.1 Genbank gene 2830062 2830613 . - . ID=gene-NM058_14700;Name=NM058_14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14700 CP101611.1 Protein Homology CDS 2830062 2830613 . - 0 ID=cds-UTX07057.1;Parent=gene-NM058_14700;Dbxref=NCBI_GP:UTX07057.1;Name=UTX07057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389219.2;locus_tag=NM058_14700;product=hypothetical protein;protein_id=UTX07057.1;transl_table=11 CP101611.1 Genbank pseudogene 2830705 2831834 . + . ID=gene-NM058_14705;Name=NM058_14705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14705;pseudo=true CP101611.1 Protein Homology CDS 2830705 2831834 . + 0 ID=cds-NM058_14705;Parent=gene-NM058_14705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015252232.1;locus_tag=NM058_14705;product=glycosyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2831839 2832303 . - . ID=gene-NM058_14710;Name=NM058_14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14710 CP101611.1 Protein Homology CDS 2831839 2832303 . - 0 ID=cds-UTX04340.1;Parent=gene-NM058_14710;Dbxref=NCBI_GP:UTX04340.1;Name=UTX04340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389217.1;locus_tag=NM058_14710;product=MarR family transcriptional regulator;protein_id=UTX04340.1;transl_table=11 CP101611.1 Genbank gene 2832436 2832618 . - . ID=gene-NM058_14715;Name=NM058_14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14715 CP101611.1 Protein Homology CDS 2832436 2832618 . - 0 ID=cds-UTX04341.1;Parent=gene-NM058_14715;Dbxref=NCBI_GP:UTX04341.1;Name=UTX04341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389216.1;locus_tag=NM058_14715;product=stress protein;protein_id=UTX04341.1;transl_table=11 CP101611.1 Genbank gene 2832706 2832861 . - . ID=gene-NM058_14720;Name=NM058_14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14720 CP101611.1 Protein Homology CDS 2832706 2832861 . - 0 ID=cds-UTX04342.1;Parent=gene-NM058_14720;Dbxref=NCBI_GP:UTX04342.1;Name=UTX04342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389215.1;locus_tag=NM058_14720;product=hypothetical protein;protein_id=UTX04342.1;transl_table=11 CP101611.1 Genbank gene 2833055 2833387 . + . ID=gene-NM058_14725;Name=tnrA;gbkey=Gene;gene=tnrA;gene_biotype=protein_coding;locus_tag=NM058_14725 CP101611.1 Protein Homology CDS 2833055 2833387 . + 0 ID=cds-UTX04343.1;Parent=gene-NM058_14725;Dbxref=NCBI_GP:UTX04343.1;Name=UTX04343.1;gbkey=CDS;gene=tnrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389214.1;locus_tag=NM058_14725;product=MerR family transcriptional regulator TnrA;protein_id=UTX04343.1;transl_table=11 CP101611.1 Genbank pseudogene 2833430 2834784 . - . ID=gene-NM058_14730;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=pseudogene;locus_tag=NM058_14730;pseudo=true CP101611.1 Protein Homology CDS 2833430 2834784 . - 0 ID=cds-NM058_14730;Parent=gene-NM058_14730;Note=frameshifted;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389213.1;locus_tag=NM058_14730;product=magnesium transporter;pseudo=true;transl_table=11 CP101611.1 cmsearch riboswitch 2835015 2835180 . - . ID=id-CP101611.1:2835015..2835180;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 2835288 2835425 . - . ID=gene-NM058_14735;Name=NM058_14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14735 CP101611.1 Protein Homology CDS 2835288 2835425 . - 0 ID=cds-UTX04344.1;Parent=gene-NM058_14735;Dbxref=NCBI_GP:UTX04344.1;Name=UTX04344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003181012.1;locus_tag=NM058_14735;product=hypothetical protein;protein_id=UTX04344.1;transl_table=11 CP101611.1 Genbank gene 2835504 2836019 . - . ID=gene-NM058_14740;Name=NM058_14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14740 CP101611.1 Protein Homology CDS 2835504 2836019 . - 0 ID=cds-UTX04345.1;Parent=gene-NM058_14740;Dbxref=NCBI_GP:UTX04345.1;Name=UTX04345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389211.1;locus_tag=NM058_14740;product=PepSY domain-containing protein;protein_id=UTX04345.1;transl_table=11 CP101611.1 Genbank gene 2836111 2836791 . - . ID=gene-NM058_14745;Name=NM058_14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14745 CP101611.1 Protein Homology CDS 2836111 2836791 . - 0 ID=cds-UTX04346.1;Parent=gene-NM058_14745;Dbxref=NCBI_GP:UTX04346.1;Name=UTX04346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389210.1;locus_tag=NM058_14745;product=PepSY domain-containing protein;protein_id=UTX04346.1;transl_table=11 CP101611.1 Genbank pseudogene 2836788 2838147 . - . ID=gene-NM058_14750;Name=NM058_14750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14750;pseudo=true CP101611.1 Protein Homology CDS 2836788 2838147 . - 0 ID=cds-NM058_14750;Parent=gene-NM058_14750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389209.1;locus_tag=NM058_14750;product=HAMP domain-containing histidine kinase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2838151 2838837 . - . ID=gene-NM058_14755;Name=ykoG;gbkey=Gene;gene=ykoG;gene_biotype=protein_coding;locus_tag=NM058_14755 CP101611.1 Protein Homology CDS 2838151 2838837 . - 0 ID=cds-UTX04347.1;Parent=gene-NM058_14755;Dbxref=NCBI_GP:UTX04347.1;Name=UTX04347.1;gbkey=CDS;gene=ykoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389208.1;locus_tag=NM058_14755;product=two-component system response regulator YkoG;protein_id=UTX04347.1;transl_table=11 CP101611.1 cmsearch riboswitch 2838939 2839050 . + . ID=id-CP101611.1:2838939..2839050;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 2839147 2839749 . + . ID=gene-NM058_14760;Name=NM058_14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14760 CP101611.1 Protein Homology CDS 2839147 2839749 . + 0 ID=cds-UTX04348.1;Parent=gene-NM058_14760;Dbxref=NCBI_GP:UTX04348.1;Name=UTX04348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389207.1;locus_tag=NM058_14760;product=Ykof family thiamine-binding protein;protein_id=UTX04348.1;transl_table=11 CP101611.1 Genbank gene 2839751 2840350 . + . ID=gene-NM058_14765;Name=NM058_14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14765 CP101611.1 Protein Homology CDS 2839751 2840350 . + 0 ID=cds-UTX04349.1;Parent=gene-NM058_14765;Dbxref=NCBI_GP:UTX04349.1;Name=UTX04349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389206.2;locus_tag=NM058_14765;product=ECF transporter S component;protein_id=UTX04349.1;transl_table=11 CP101611.1 Genbank pseudogene 2840337 2841979 . + . ID=gene-NM058_14770;Name=NM058_14770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14770;pseudo=true CP101611.1 Protein Homology CDS 2840337 2841979 . + 0 ID=cds-NM058_14770;Parent=gene-NM058_14770;Note=frameshifted;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389205.2;locus_tag=NM058_14770;product=energy-coupling factor transporter ATPase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2842020 2842719 . + . ID=gene-NM058_14775;Name=NM058_14775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14775;pseudo=true CP101611.1 Protein Homology CDS 2842020 2842719 . + 0 ID=cds-NM058_14775;Parent=gene-NM058_14775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014420.2;locus_tag=NM058_14775;product=CbiQ family ECF transporter T component;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2842751 2843584 . - . ID=gene-NM058_14780;Name=rsbRB;gbkey=Gene;gene=rsbRB;gene_biotype=protein_coding;locus_tag=NM058_14780 CP101611.1 Protein Homology CDS 2842751 2843584 . - 0 ID=cds-UTX04350.1;Parent=gene-NM058_14780;Dbxref=NCBI_GP:UTX04350.1;Name=UTX04350.1;gbkey=CDS;gene=rsbRB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389203.1;locus_tag=NM058_14780;product=RsbT co-antagonist RsbRB;protein_id=UTX04350.1;transl_table=11 CP101611.1 Genbank gene 2843807 2844766 . + . ID=gene-NM058_14785;Name=isp;gbkey=Gene;gene=isp;gene_biotype=protein_coding;gene_synonym=ispA;locus_tag=NM058_14785 CP101611.1 Protein Homology CDS 2843807 2844766 . + 0 ID=cds-UTX04351.1;Parent=gene-NM058_14785;Dbxref=NCBI_GP:UTX04351.1;Name=UTX04351.1;gbkey=CDS;gene=isp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389202.1;locus_tag=NM058_14785;product=serine protease Isp;protein_id=UTX04351.1;transl_table=11 CP101611.1 cmsearch riboswitch 2844898 2845053 . + . ID=id-CP101611.1:2844898..2845053;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 2845181 2847469 . + . ID=gene-NM058_14790;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=NM058_14790 CP101611.1 Protein Homology CDS 2845181 2847469 . + 0 ID=cds-UTX04352.1;Parent=gene-NM058_14790;Dbxref=NCBI_GP:UTX04352.1;Name=UTX04352.1;Ontology_term=GO:0009086,GO:0003871;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389201.2;locus_tag=NM058_14790;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=UTX04352.1;transl_table=11 CP101611.1 Genbank gene 2847509 2848135 . - . ID=gene-NM058_14795;Name=NM058_14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14795 CP101611.1 Protein Homology CDS 2847509 2848135 . - 0 ID=cds-UTX04353.1;Parent=gene-NM058_14795;Dbxref=NCBI_GP:UTX04353.1;Name=UTX04353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015383476.1;locus_tag=NM058_14795;product=histidine phosphatase family protein;protein_id=UTX04353.1;transl_table=11 CP101611.1 Genbank gene 2848271 2848741 . + . ID=gene-NM058_14800;Name=NM058_14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14800 CP101611.1 Protein Homology CDS 2848271 2848741 . + 0 ID=cds-UTX04354.1;Parent=gene-NM058_14800;Dbxref=NCBI_GP:UTX04354.1;Name=UTX04354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389200.1;locus_tag=NM058_14800;product=nucleoside deaminase;protein_id=UTX04354.1;transl_table=11 CP101611.1 Genbank gene 2848747 2849301 . - . ID=gene-NM058_14805;Name=NM058_14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14805 CP101611.1 GeneMarkS-2+ CDS 2848747 2849301 . - 0 ID=cds-UTX04355.1;Parent=gene-NM058_14805;Dbxref=NCBI_GP:UTX04355.1;Name=UTX04355.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_14805;product=hypothetical protein;protein_id=UTX04355.1;transl_table=11 CP101611.1 Genbank gene 2849334 2849849 . - . ID=gene-NM058_14810;Name=NM058_14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14810 CP101611.1 Protein Homology CDS 2849334 2849849 . - 0 ID=cds-UTX04356.1;Parent=gene-NM058_14810;Dbxref=NCBI_GP:UTX04356.1;Name=UTX04356.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.2;locus_tag=NM058_14810;product=glycosyltransferase family 2 protein;protein_id=UTX04356.1;transl_table=11 CP101611.1 Genbank gene 2849974 2850384 . - . ID=gene-NM058_14815;Name=NM058_14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14815 CP101611.1 Protein Homology CDS 2849974 2850384 . - 0 ID=cds-UTX04357.1;Parent=gene-NM058_14815;Dbxref=NCBI_GP:UTX04357.1;Name=UTX04357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389199.1;locus_tag=NM058_14815;product=organic hydroperoxide resistance protein;protein_id=UTX04357.1;transl_table=11 CP101611.1 Genbank pseudogene 2850526 2850970 . + . ID=gene-NM058_14820;Name=NM058_14820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14820;pseudo=true CP101611.1 Protein Homology CDS 2850526 2850970 . + 0 ID=cds-NM058_14820;Parent=gene-NM058_14820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389198.1;locus_tag=NM058_14820;product=MarR family transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2851003 2851428 . - . ID=gene-NM058_14825;Name=NM058_14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14825 CP101611.1 Protein Homology CDS 2851003 2851428 . - 0 ID=cds-UTX04358.1;Parent=gene-NM058_14825;Dbxref=NCBI_GP:UTX04358.1;Name=UTX04358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389197.1;locus_tag=NM058_14825;product=organic hydroperoxide resistance protein;protein_id=UTX04358.1;transl_table=11 CP101611.1 Genbank gene 2851556 2852803 . - . ID=gene-NM058_14830;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=NM058_14830 CP101611.1 Protein Homology CDS 2851556 2852803 . - 0 ID=cds-UTX04359.1;Parent=gene-NM058_14830;Dbxref=NCBI_GP:UTX04359.1;Name=UTX04359.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389196.2;locus_tag=NM058_14830;product=glutamate-5-semialdehyde dehydrogenase;protein_id=UTX04359.1;transl_table=11 CP101611.1 Genbank gene 2852815 2853912 . - . ID=gene-NM058_14835;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=NM058_14835 CP101611.1 Protein Homology CDS 2852815 2853912 . - 0 ID=cds-UTX04360.1;Parent=gene-NM058_14835;Dbxref=NCBI_GP:UTX04360.1;Name=UTX04360.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389195.2;locus_tag=NM058_14835;product=glutamate 5-kinase;protein_id=UTX04360.1;transl_table=11 CP101611.1 cmsearch binding_site 2853976 2854185 . - . ID=id-CP101611.1:2853976..2854185;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 CP101611.1 Genbank pseudogene 2854273 2855174 . - . ID=gene-NM058_14840;Name=purU;gbkey=Gene;gene=purU;gene_biotype=pseudogene;locus_tag=NM058_14840;pseudo=true CP101611.1 Protein Homology CDS 2854273 2855174 . - 0 ID=cds-NM058_14840;Parent=gene-NM058_14840;Note=frameshifted;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389194.2;locus_tag=NM058_14840;product=formyltetrahydrofolate deformylase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2855245 2855562 . - . ID=gene-NM058_14845;Name=ykkD;gbkey=Gene;gene=ykkD;gene_biotype=protein_coding;locus_tag=NM058_14845 CP101611.1 Protein Homology CDS 2855245 2855562 . - 0 ID=cds-UTX04361.1;Parent=gene-NM058_14845;Dbxref=NCBI_GP:UTX04361.1;Name=UTX04361.1;gbkey=CDS;gene=ykkD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389193.1;locus_tag=NM058_14845;product=multidrug efflux SMR transporter subunit YkkD;protein_id=UTX04361.1;transl_table=11 CP101611.1 Genbank gene 2855562 2855900 . - . ID=gene-NM058_14850;Name=ykkC;gbkey=Gene;gene=ykkC;gene_biotype=protein_coding;locus_tag=NM058_14850 CP101611.1 Protein Homology CDS 2855562 2855900 . - 0 ID=cds-UTX04362.1;Parent=gene-NM058_14850;Dbxref=NCBI_GP:UTX04362.1;Name=UTX04362.1;gbkey=CDS;gene=ykkC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389192.1;locus_tag=NM058_14850;product=multidrug efflux SMR transporter subunit YkkC;protein_id=UTX04362.1;transl_table=11 CP101611.1 cmsearch riboswitch 2855978 2856086 . - . ID=id-CP101611.1:2855978..2856086;Dbxref=RFAM:RF00442;Note=guanidine-I (ykkC/yxkD leader) riboswitch%3B Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria%3B This is class of guanidine riboswitches is based on the ykkC/yxkD leader.;bound_moiety=guanidine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 2856120 2856635 . - . ID=gene-NM058_14855;Name=NM058_14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14855 CP101611.1 Protein Homology CDS 2856120 2856635 . - 0 ID=cds-UTX04363.1;Parent=gene-NM058_14855;Dbxref=NCBI_GP:UTX04363.1;Name=UTX04363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258193.1;locus_tag=NM058_14855;product=GNAT family N-acetyltransferase;protein_id=UTX04363.1;transl_table=11 CP101611.1 Genbank gene 2856625 2857152 . - . ID=gene-NM058_14860;Name=NM058_14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14860 CP101611.1 Protein Homology CDS 2856625 2857152 . - 0 ID=cds-UTX04364.1;Parent=gene-NM058_14860;Dbxref=NCBI_GP:UTX04364.1;Name=UTX04364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389190.1;locus_tag=NM058_14860;product=DinB family protein;protein_id=UTX04364.1;transl_table=11 CP101611.1 Genbank gene 2857240 2857971 . - . ID=gene-NM058_14865;Name=NM058_14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14865 CP101611.1 Protein Homology CDS 2857240 2857971 . - 0 ID=cds-UTX04365.1;Parent=gene-NM058_14865;Dbxref=NCBI_GP:UTX04365.1;Name=UTX04365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389189.1;locus_tag=NM058_14865;product=DUF421 domain-containing protein;protein_id=UTX04365.1;transl_table=11 CP101611.1 Genbank gene 2858125 2858352 . + . ID=gene-NM058_14870;Name=NM058_14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14870 CP101611.1 Protein Homology CDS 2858125 2858352 . + 0 ID=cds-UTX04366.1;Parent=gene-NM058_14870;Dbxref=NCBI_GP:UTX04366.1;Name=UTX04366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389188.1;locus_tag=NM058_14870;product=hypothetical protein;protein_id=UTX04366.1;transl_table=11 CP101611.1 Genbank gene 2858429 2859628 . - . ID=gene-NM058_14875;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=NM058_14875 CP101611.1 Protein Homology CDS 2858429 2859628 . - 0 ID=cds-UTX04367.1;Parent=gene-NM058_14875;Dbxref=NCBI_GP:UTX04367.1;Name=UTX04367.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389187.1;locus_tag=NM058_14875;product=NO-inducible flavohemoprotein;protein_id=UTX04367.1;transl_table=11 CP101611.1 Genbank gene 2859876 2860394 . - . ID=gene-NM058_14880;Name=NM058_14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14880 CP101611.1 Protein Homology CDS 2859876 2860394 . - 0 ID=cds-UTX07058.1;Parent=gene-NM058_14880;Dbxref=NCBI_GP:UTX07058.1;Name=UTX07058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389186.2;locus_tag=NM058_14880;product=acyl-CoA thioesterase;protein_id=UTX07058.1;transl_table=11 CP101611.1 Genbank gene 2860584 2861444 . + . ID=gene-NM058_14885;Name=NM058_14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14885 CP101611.1 Protein Homology CDS 2860584 2861444 . + 0 ID=cds-UTX04368.1;Parent=gene-NM058_14885;Dbxref=NCBI_GP:UTX04368.1;Name=UTX04368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389185.2;locus_tag=NM058_14885;product=dimethylarginine dimethylaminohydrolase family protein;protein_id=UTX04368.1;transl_table=11 CP101611.1 Genbank gene 2861534 2862583 . + . ID=gene-NM058_14890;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=NM058_14890 CP101611.1 Protein Homology CDS 2861534 2862583 . + 0 ID=cds-UTX04369.1;Parent=gene-NM058_14890;Dbxref=NCBI_GP:UTX04369.1;Name=UTX04369.1;gbkey=CDS;gene=pgl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003239074.1;locus_tag=NM058_14890;product=6-phosphogluconolactonase;protein_id=UTX04369.1;transl_table=11 CP101611.1 Genbank pseudogene 2862626 2863614 . - . ID=gene-NM058_14895;Name=NM058_14895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14895;pseudo=true CP101611.1 Protein Homology CDS 2862626 2863614 . - 0 ID=cds-NM058_14895;Parent=gene-NM058_14895;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389183.2;locus_tag=NM058_14895;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2863627 2864516 . - . ID=gene-NM058_14900;Name=NM058_14900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14900;pseudo=true CP101611.1 Protein Homology CDS 2863627 2864516 . - 0 ID=cds-NM058_14900;Parent=gene-NM058_14900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389182.2;locus_tag=NM058_14900;product=C40 family peptidase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2864513 2865612 . - . ID=gene-NM058_14905;Name=ykfB;gbkey=Gene;gene=ykfB;gene_biotype=pseudogene;gene_synonym=aeeB;locus_tag=NM058_14905;pseudo=true CP101611.1 Protein Homology CDS 2864513 2865612 . - 0 ID=cds-NM058_14905;Parent=gene-NM058_14905;Note=frameshifted;gbkey=CDS;gene=ykfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389181.1;locus_tag=NM058_14905;product=L-Ala-D/L-Glu epimerase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2865609 2866567 . - . ID=gene-NM058_14910;Name=NM058_14910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14910;pseudo=true CP101611.1 Protein Homology CDS 2865609 2866567 . - 0 ID=cds-NM058_14910;Parent=gene-NM058_14910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389180.2;locus_tag=NM058_14910;product=LD-carboxypeptidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2866655 2868304 . - . ID=gene-NM058_14915;Name=dppE;gbkey=Gene;gene=dppE;gene_biotype=protein_coding;locus_tag=NM058_14915 CP101611.1 Protein Homology CDS 2866655 2868304 . - 0 ID=cds-UTX04370.1;Parent=gene-NM058_14915;Dbxref=NCBI_GP:UTX04370.1;Name=UTX04370.1;gbkey=CDS;gene=dppE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389179.2;locus_tag=NM058_14915;product=dipeptide ABC transporter substrate-binding protein DppE;protein_id=UTX04370.1;transl_table=11 CP101611.1 Genbank gene 2868307 2869314 . - . ID=gene-NM058_14920;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=NM058_14920 CP101611.1 Protein Homology CDS 2868307 2869314 . - 0 ID=cds-UTX04371.1;Parent=gene-NM058_14920;Dbxref=NCBI_GP:UTX04371.1;Name=UTX04371.1;gbkey=CDS;gene=dppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389178.1;locus_tag=NM058_14920;product=dipeptide ABC transporter ATP-binding subunit DppD;protein_id=UTX04371.1;transl_table=11 CP101611.1 Genbank gene 2869319 2870281 . - . ID=gene-NM058_14925;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=NM058_14925 CP101611.1 Protein Homology CDS 2869319 2870281 . - 0 ID=cds-UTX04372.1;Parent=gene-NM058_14925;Dbxref=NCBI_GP:UTX04372.1;Name=UTX04372.1;gbkey=CDS;gene=dppC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389177.1;locus_tag=NM058_14925;product=dipeptide ABC transporter permease DppC;protein_id=UTX04372.1;transl_table=11 CP101611.1 Genbank gene 2870287 2871213 . - . ID=gene-NM058_14930;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=NM058_14930 CP101611.1 Protein Homology CDS 2870287 2871213 . - 0 ID=cds-UTX04373.1;Parent=gene-NM058_14930;Dbxref=NCBI_GP:UTX04373.1;Name=UTX04373.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389176.1;locus_tag=NM058_14930;product=dipeptide ABC transporter permease DppB;protein_id=UTX04373.1;transl_table=11 CP101611.1 Genbank gene 2871229 2872053 . - . ID=gene-NM058_14935;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=NM058_14935 CP101611.1 Protein Homology CDS 2871229 2872053 . - 0 ID=cds-UTX04374.1;Parent=gene-NM058_14935;Dbxref=NCBI_GP:UTX04374.1;Name=UTX04374.1;gbkey=CDS;gene=dppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389175.2;locus_tag=NM058_14935;product=D-aminopeptidase DppA;protein_id=UTX04374.1;transl_table=11 CP101611.1 Genbank pseudogene 2872180 2872997 . - . ID=gene-NM058_14940;Name=proG;gbkey=Gene;gene=proG;gene_biotype=pseudogene;locus_tag=NM058_14940;pseudo=true CP101611.1 Protein Homology CDS 2872180 2872997 . - 0 ID=cds-NM058_14940;Parent=gene-NM058_14940;Note=frameshifted;gbkey=CDS;gene=proG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003239085.1;locus_tag=NM058_14940;product=pyrroline-5-carboxylate reductase ProG;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2873169 2874539 . + . ID=gene-NM058_14945;Name=htrA;gbkey=Gene;gene=htrA;gene_biotype=protein_coding;locus_tag=NM058_14945 CP101611.1 Protein Homology CDS 2873169 2874539 . + 0 ID=cds-UTX07059.1;Parent=gene-NM058_14945;Dbxref=NCBI_GP:UTX07059.1;Name=UTX07059.1;gbkey=CDS;gene=htrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389173.2;locus_tag=NM058_14945;product=serine protease HtrA;protein_id=UTX07059.1;transl_table=11 CP101611.1 Genbank gene 2875039 2876010 . - . ID=gene-NM058_14950;Name=NM058_14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14950 CP101611.1 Protein Homology CDS 2875039 2876010 . - 0 ID=cds-UTX04375.1;Parent=gene-NM058_14950;Dbxref=NCBI_GP:UTX04375.1;Name=UTX04375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389172.2;locus_tag=NM058_14950;product=glycosyltransferase family 2 protein;protein_id=UTX04375.1;transl_table=11 CP101611.1 Genbank pseudogene 2876022 2878213 . - . ID=gene-NM058_14955;Name=NM058_14955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14955;pseudo=true CP101611.1 Protein Homology CDS 2876022 2878213 . - 0 ID=cds-NM058_14955;Parent=gene-NM058_14955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389171.2;locus_tag=NM058_14955;product=glycosyltransferase family 39 protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2878221 2878366 . - . ID=gene-NM058_14960;Name=NM058_14960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14960;pseudo=true CP101611.1 Protein Homology CDS 2878221 2878366 . - 0 ID=cds-NM058_14960;Parent=gene-NM058_14960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513953.1;locus_tag=NM058_14960;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2878467 2879417 . - . ID=gene-NM058_14965;Name=NM058_14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14965 CP101611.1 Protein Homology CDS 2878467 2879417 . - 0 ID=cds-UTX04376.1;Parent=gene-NM058_14965;Dbxref=NCBI_GP:UTX04376.1;Name=UTX04376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389170.1;locus_tag=NM058_14965;product=ring-cleaving dioxygenase;protein_id=UTX04376.1;transl_table=11 CP101611.1 Genbank pseudogene 2879803 2881116 . + . ID=gene-NM058_14970;Name=steT;gbkey=Gene;gene=steT;gene_biotype=pseudogene;locus_tag=NM058_14970;pseudo=true CP101611.1 Protein Homology CDS 2879803 2881116 . + 0 ID=cds-NM058_14970;Parent=gene-NM058_14970;Note=frameshifted;gbkey=CDS;gene=steT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389169.1;locus_tag=NM058_14970;product=serine/threonine exchanger;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2881392 2882009 . + . ID=gene-NM058_14975;Name=NM058_14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_14975 CP101611.1 Protein Homology CDS 2881392 2882009 . + 0 ID=cds-UTX04377.1;Parent=gene-NM058_14975;Dbxref=NCBI_GP:UTX04377.1;Name=UTX04377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389168.1;locus_tag=NM058_14975;product=DUF47 domain-containing protein;protein_id=UTX04377.1;transl_table=11 CP101611.1 Genbank pseudogene 2882022 2883018 . + . ID=gene-NM058_14980;Name=NM058_14980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_14980;pseudo=true CP101611.1 Protein Homology CDS 2882022 2883018 . + 0 ID=cds-NM058_14980;Parent=gene-NM058_14980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389167.2;locus_tag=NM058_14980;product=inorganic phosphate transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2883128 2883874 . + . ID=gene-NM058_14985;Name=spoIISA;gbkey=Gene;gene=spoIISA;gene_biotype=protein_coding;locus_tag=NM058_14985 CP101611.1 Protein Homology CDS 2883128 2883874 . + 0 ID=cds-UTX04378.1;Parent=gene-NM058_14985;Dbxref=NCBI_GP:UTX04378.1;Name=UTX04378.1;gbkey=CDS;gene=spoIISA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389166.1;locus_tag=NM058_14985;product=toxin-antitoxin-antitoxin system toxin SpoIISA;protein_id=UTX04378.1;transl_table=11 CP101611.1 Genbank gene 2883874 2884044 . + . ID=gene-NM058_14990;Name=spoIISB;gbkey=Gene;gene=spoIISB;gene_biotype=protein_coding;locus_tag=NM058_14990 CP101611.1 Protein Homology CDS 2883874 2884044 . + 0 ID=cds-UTX04379.1;Parent=gene-NM058_14990;Dbxref=NCBI_GP:UTX04379.1;Name=UTX04379.1;gbkey=CDS;gene=spoIISB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389165.1;locus_tag=NM058_14990;product=three component toxin-antitoxin-antitoxin system antitoxin SpoIISB;protein_id=UTX04379.1;transl_table=11 CP101611.1 Genbank gene 2884129 2884266 . + . ID=gene-NM058_14995;Name=spoIISC;gbkey=Gene;gene=spoIISC;gene_biotype=protein_coding;locus_tag=NM058_14995 CP101611.1 Protein Homology CDS 2884129 2884266 . + 0 ID=cds-UTX04380.1;Parent=gene-NM058_14995;Dbxref=NCBI_GP:UTX04380.1;Name=UTX04380.1;gbkey=CDS;gene=spoIISC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513952.1;locus_tag=NM058_14995;product=three component toxin-antitoxin-antitoxin system antitoxin SpoIISC;protein_id=UTX04380.1;transl_table=11 CP101611.1 Genbank pseudogene 2884303 2885195 . - . ID=gene-NM058_15000;Name=NM058_15000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15000;pseudo=true CP101611.1 Protein Homology CDS 2884303 2885195 . - 0 ID=cds-NM058_15000;Parent=gene-NM058_15000;Note=frameshifted;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389164.1;locus_tag=NM058_15000;product=N-acetylmuramoyl-L-alanine amidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2885208 2885471 . - . ID=gene-NM058_15005;Name=NM058_15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15005 CP101611.1 Protein Homology CDS 2885208 2885471 . - 0 ID=cds-UTX04381.1;Parent=gene-NM058_15005;Dbxref=NCBI_GP:UTX04381.1;Name=UTX04381.1;Ontology_term=GO:0034290;gbkey=CDS;go_function=holin activity|0034290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389163.1;locus_tag=NM058_15005;product=phage holin;protein_id=UTX04381.1;transl_table=11 CP101611.1 Genbank gene 2885484 2885753 . - . ID=gene-NM058_15010;Name=NM058_15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15010 CP101611.1 Protein Homology CDS 2885484 2885753 . - 0 ID=cds-UTX07060.1;Parent=gene-NM058_15010;Dbxref=NCBI_GP:UTX07060.1;Name=UTX07060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389162.1;locus_tag=NM058_15010;product=hemolysin XhlA family protein;protein_id=UTX07060.1;transl_table=11 CP101611.1 Genbank gene 2885806 2886645 . - . ID=gene-NM058_15015;Name=NM058_15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15015 CP101611.1 Protein Homology CDS 2885806 2886645 . - 0 ID=cds-UTX04382.1;Parent=gene-NM058_15015;Dbxref=NCBI_GP:UTX04382.1;Name=UTX04382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389161.2;locus_tag=NM058_15015;product=phage portal protein;protein_id=UTX04382.1;transl_table=11 CP101611.1 Genbank gene 2886692 2886856 . - . ID=gene-NM058_15020;Name=NM058_15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15020 CP101611.1 Protein Homology CDS 2886692 2886856 . - 0 ID=cds-UTX04383.1;Parent=gene-NM058_15020;Dbxref=NCBI_GP:UTX04383.1;Name=UTX04383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389160.1;locus_tag=NM058_15020;product=XkdX family protein;protein_id=UTX04383.1;transl_table=11 CP101611.1 Genbank gene 2886853 2887182 . - . ID=gene-NM058_15025;Name=NM058_15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15025 CP101611.1 Protein Homology CDS 2886853 2887182 . - 0 ID=cds-UTX04384.1;Parent=gene-NM058_15025;Dbxref=NCBI_GP:UTX04384.1;Name=UTX04384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389159.1;locus_tag=NM058_15025;product=XkdW family protein;protein_id=UTX04384.1;transl_table=11 CP101611.1 Genbank gene 2887194 2888999 . - . ID=gene-NM058_15030;Name=NM058_15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15030 CP101611.1 Protein Homology CDS 2887194 2888999 . - 0 ID=cds-UTX07061.1;Parent=gene-NM058_15030;Dbxref=NCBI_GP:UTX07061.1;Name=UTX07061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015252269.1;locus_tag=NM058_15030;product=terminase;protein_id=UTX07061.1;transl_table=11 CP101611.1 Genbank pseudogene 2889042 2889305 . - . ID=gene-NM058_15035;Name=NM058_15035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15035;pseudo=true CP101611.1 Protein Homology CDS 2889042 2889305 . - 0 ID=cds-NM058_15035;Parent=gene-NM058_15035;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_390472.2;locus_tag=NM058_15035;product=terminase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2889308 2889580 . - . ID=gene-NM058_15040;Name=NM058_15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15040 CP101611.1 Protein Homology CDS 2889308 2889580 . - 0 ID=cds-UTX04385.1;Parent=gene-NM058_15040;Dbxref=NCBI_GP:UTX04385.1;Name=UTX04385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097716.1;locus_tag=NM058_15040;product=hypothetical protein;protein_id=UTX04385.1;transl_table=11 CP101611.1 Genbank gene 2889577 2890155 . - . ID=gene-NM058_15045;Name=NM058_15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15045 CP101611.1 Protein Homology CDS 2889577 2890155 . - 0 ID=cds-UTX04386.1;Parent=gene-NM058_15045;Dbxref=NCBI_GP:UTX04386.1;Name=UTX04386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014470497.1;locus_tag=NM058_15045;product=YmfQ family protein;protein_id=UTX04386.1;transl_table=11 CP101611.1 Genbank gene 2890139 2891185 . - . ID=gene-NM058_15050;Name=NM058_15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15050 CP101611.1 Protein Homology CDS 2890139 2891185 . - 0 ID=cds-UTX04387.1;Parent=gene-NM058_15050;Dbxref=NCBI_GP:UTX04387.1;Name=UTX04387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389155.1;locus_tag=NM058_15050;product=baseplate J/gp47 family protein;protein_id=UTX04387.1;transl_table=11 CP101611.1 Genbank gene 2891178 2891603 . - . ID=gene-NM058_15055;Name=NM058_15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15055 CP101611.1 Protein Homology CDS 2891178 2891603 . - 0 ID=cds-UTX04388.1;Parent=gene-NM058_15055;Dbxref=NCBI_GP:UTX04388.1;Name=UTX04388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389154.1;locus_tag=NM058_15055;product=DUF2634 domain-containing protein;protein_id=UTX04388.1;transl_table=11 CP101611.1 Genbank gene 2891663 2891929 . - . ID=gene-NM058_15060;Name=NM058_15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15060 CP101611.1 Protein Homology CDS 2891663 2891929 . - 0 ID=cds-UTX04389.1;Parent=gene-NM058_15060;Dbxref=NCBI_GP:UTX04389.1;Name=UTX04389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389153.1;locus_tag=NM058_15060;product=DUF2577 domain-containing protein;protein_id=UTX04389.1;transl_table=11 CP101611.1 Genbank gene 2891929 2892906 . - . ID=gene-NM058_15065;Name=NM058_15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15065 CP101611.1 Protein Homology CDS 2891929 2892906 . - 0 ID=cds-UTX07062.1;Parent=gene-NM058_15065;Dbxref=NCBI_GP:UTX07062.1;Name=UTX07062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389152.1;locus_tag=NM058_15065;product=phage portal protein;protein_id=UTX07062.1;transl_table=11 CP101611.1 Genbank pseudogene 2892922 2893579 . - . ID=gene-NM058_15070;Name=NM058_15070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15070;pseudo=true CP101611.1 Protein Homology CDS 2892922 2893579 . - 0 ID=cds-NM058_15070;Parent=gene-NM058_15070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389151.2;locus_tag=NM058_15070;product=LysM peptidoglycan-binding domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2893572 2897573 . - . ID=gene-NM058_15075;Name=NM058_15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15075 CP101611.1 Protein Homology CDS 2893572 2897573 . - 0 ID=cds-UTX07063.1;Parent=gene-NM058_15075;Dbxref=NCBI_GP:UTX07063.1;Name=UTX07063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389150.2;locus_tag=NM058_15075;product=transglycosylase SLT domain-containing protein;protein_id=UTX07063.1;transl_table=11 CP101611.1 Genbank gene 2897575 2897724 . - . ID=gene-NM058_15080;Name=NM058_15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15080 CP101611.1 Protein Homology CDS 2897575 2897724 . - 0 ID=cds-UTX04390.1;Parent=gene-NM058_15080;Dbxref=NCBI_GP:UTX04390.1;Name=UTX04390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097715.1;locus_tag=NM058_15080;product=hypothetical protein;protein_id=UTX04390.1;transl_table=11 CP101611.1 Genbank gene 2897754 2898200 . - . ID=gene-NM058_15085;Name=NM058_15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15085 CP101611.1 Protein Homology CDS 2897754 2898200 . - 0 ID=cds-UTX04391.1;Parent=gene-NM058_15085;Dbxref=NCBI_GP:UTX04391.1;Name=UTX04391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389149.2;locus_tag=NM058_15085;product=phage-like element PBSX protein XkdN;protein_id=UTX04391.1;transl_table=11 CP101611.1 Genbank gene 2898291 2898734 . - . ID=gene-NM058_15090;Name=NM058_15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15090 CP101611.1 Protein Homology CDS 2898291 2898734 . - 0 ID=cds-UTX04392.1;Parent=gene-NM058_15090;Dbxref=NCBI_GP:UTX04392.1;Name=UTX04392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389148.1;locus_tag=NM058_15090;product=phage tail tube protein;protein_id=UTX04392.1;transl_table=11 CP101611.1 Genbank pseudogene 2898736 2900135 . - . ID=gene-NM058_15095;Name=NM058_15095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15095;pseudo=true CP101611.1 Protein Homology CDS 2898736 2900135 . - 0 ID=cds-NM058_15095;Parent=gene-NM058_15095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389147.2;locus_tag=NM058_15095;product=phage tail sheath family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2900132 2900350 . - . ID=gene-NM058_15100;Name=NM058_15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15100 CP101611.1 Protein Homology CDS 2900132 2900350 . - 0 ID=cds-UTX04393.1;Parent=gene-NM058_15100;Dbxref=NCBI_GP:UTX04393.1;Name=UTX04393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097714.1;locus_tag=NM058_15100;product=hypothetical protein;protein_id=UTX04393.1;transl_table=11 CP101611.1 Genbank gene 2900354 2900794 . - . ID=gene-NM058_15105;Name=NM058_15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15105 CP101611.1 Protein Homology CDS 2900354 2900794 . - 0 ID=cds-UTX04394.1;Parent=gene-NM058_15105;Dbxref=NCBI_GP:UTX04394.1;Name=UTX04394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389146.1;locus_tag=NM058_15105;product=phage portal protein;protein_id=UTX04394.1;transl_table=11 CP101611.1 Genbank gene 2900808 2901293 . - . ID=gene-NM058_15110;Name=NM058_15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15110 CP101611.1 Protein Homology CDS 2900808 2901293 . - 0 ID=cds-UTX04395.1;Parent=gene-NM058_15110;Dbxref=NCBI_GP:UTX04395.1;Name=UTX04395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389145.1;locus_tag=NM058_15110;product=HK97 gp10 family phage protein;protein_id=UTX04395.1;transl_table=11 CP101611.1 Genbank gene 2901290 2901643 . - . ID=gene-NM058_15115;Name=NM058_15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15115 CP101611.1 Protein Homology CDS 2901290 2901643 . - 0 ID=cds-UTX04396.1;Parent=gene-NM058_15115;Dbxref=NCBI_GP:UTX04396.1;Name=UTX04396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389144.1;locus_tag=NM058_15115;product=YqbH/XkdH family protein;protein_id=UTX04396.1;transl_table=11 CP101611.1 Genbank gene 2901640 2902023 . - . ID=gene-NM058_15120;Name=NM058_15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15120 CP101611.1 Protein Homology CDS 2901640 2902023 . - 0 ID=cds-UTX04397.1;Parent=gene-NM058_15120;Dbxref=NCBI_GP:UTX04397.1;Name=UTX04397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097713.1;locus_tag=NM058_15120;product=DUF3199 family protein;protein_id=UTX04397.1;transl_table=11 CP101611.1 Genbank gene 2902045 2902980 . - . ID=gene-NM058_15125;Name=NM058_15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15125 CP101611.1 Protein Homology CDS 2902045 2902980 . - 0 ID=cds-UTX04398.1;Parent=gene-NM058_15125;Dbxref=NCBI_GP:UTX04398.1;Name=UTX04398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389143.1;locus_tag=NM058_15125;product=phage major capsid protein;protein_id=UTX04398.1;transl_table=11 CP101611.1 Genbank gene 2903006 2903833 . - . ID=gene-NM058_15130;Name=NM058_15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15130 CP101611.1 Protein Homology CDS 2903006 2903833 . - 0 ID=cds-UTX04399.1;Parent=gene-NM058_15130;Dbxref=NCBI_GP:UTX04399.1;Name=UTX04399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389142.2;locus_tag=NM058_15130;product=XkdF-like putative serine protease domain-containing protein;protein_id=UTX04399.1;transl_table=11 CP101611.1 Genbank pseudogene 2903853 2905339 . - . ID=gene-NM058_15135;Name=NM058_15135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15135;pseudo=true CP101611.1 Protein Homology CDS 2903853 2905339 . - 0 ID=cds-NM058_15135;Parent=gene-NM058_15135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389141.2;locus_tag=NM058_15135;product=phage portal protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2905343 2906644 . - . ID=gene-NM058_15140;Name=NM058_15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15140 CP101611.1 Protein Homology CDS 2905343 2906644 . - 0 ID=cds-UTX04400.1;Parent=gene-NM058_15140;Dbxref=NCBI_GP:UTX04400.1;Name=UTX04400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389140.1;locus_tag=NM058_15140;product=PBSX family phage terminase large subunit;protein_id=UTX04400.1;transl_table=11 CP101611.1 Genbank pseudogene 2906641 2907437 . - . ID=gene-NM058_15145;Name=xtmA;gbkey=Gene;gene=xtmA;gene_biotype=pseudogene;locus_tag=NM058_15145;pseudo=true CP101611.1 Protein Homology CDS 2906641 2907437 . - 0 ID=cds-NM058_15145;Parent=gene-NM058_15145;Note=frameshifted;gbkey=CDS;gene=xtmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014113472.1;locus_tag=NM058_15145;product=phage terminase small subunit;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2907555 2908064 . - . ID=gene-NM058_15150;Name=NM058_15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15150 CP101611.1 Protein Homology CDS 2907555 2908064 . - 0 ID=cds-UTX04401.1;Parent=gene-NM058_15150;Dbxref=NCBI_GP:UTX04401.1;Name=UTX04401.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389138.1;locus_tag=NM058_15150;product=sigma-70 family RNA polymerase sigma factor;protein_id=UTX04401.1;transl_table=11 CP101611.1 Genbank gene 2908179 2908385 . - . ID=gene-NM058_15155;Name=xtrA;gbkey=Gene;gene=xtrA;gene_biotype=protein_coding;locus_tag=NM058_15155 CP101611.1 Protein Homology CDS 2908179 2908385 . - 0 ID=cds-UTX04402.1;Parent=gene-NM058_15155;Dbxref=NCBI_GP:UTX04402.1;Name=UTX04402.1;gbkey=CDS;gene=xtrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389137.1;locus_tag=NM058_15155;product=phage-like element PBSX protein XtrA;protein_id=UTX04402.1;transl_table=11 CP101611.1 Genbank gene 2908372 2908728 . - . ID=gene-NM058_15160;Name=NM058_15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15160 CP101611.1 Protein Homology CDS 2908372 2908728 . - 0 ID=cds-UTX04403.1;Parent=gene-NM058_15160;Dbxref=NCBI_GP:UTX04403.1;Name=UTX04403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014113469.1;locus_tag=NM058_15160;product=phage portal protein;protein_id=UTX04403.1;transl_table=11 CP101611.1 Genbank gene 2908813 2908980 . - . ID=gene-NM058_15165;Name=NM058_15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15165 CP101611.1 Protein Homology CDS 2908813 2908980 . - 0 ID=cds-UTX04404.1;Parent=gene-NM058_15165;Dbxref=NCBI_GP:UTX04404.1;Name=UTX04404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097712.1;locus_tag=NM058_15165;product=hypothetical protein;protein_id=UTX04404.1;transl_table=11 CP101611.1 Genbank gene 2908980 2909780 . - . ID=gene-NM058_15170;Name=NM058_15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15170 CP101611.1 Protein Homology CDS 2908980 2909780 . - 0 ID=cds-UTX04405.1;Parent=gene-NM058_15170;Dbxref=NCBI_GP:UTX04405.1;Name=UTX04405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389135.2;locus_tag=NM058_15170;product=ATP-binding protein;protein_id=UTX04405.1;transl_table=11 CP101611.1 Genbank gene 2909680 2910516 . - . ID=gene-NM058_15175;Name=NM058_15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15175 CP101611.1 Protein Homology CDS 2909680 2910516 . - 0 ID=cds-UTX04406.1;Parent=gene-NM058_15175;Dbxref=NCBI_GP:UTX04406.1;Name=UTX04406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389134.2;locus_tag=NM058_15175;product=phage portal protein;protein_id=UTX04406.1;transl_table=11 CP101611.1 Genbank gene 2910503 2910682 . - . ID=gene-NM058_15180;Name=NM058_15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15180 CP101611.1 Protein Homology CDS 2910503 2910682 . - 0 ID=cds-UTX04407.1;Parent=gene-NM058_15180;Dbxref=NCBI_GP:UTX04407.1;Name=UTX04407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097711.1;locus_tag=NM058_15180;product=hypothetical protein;protein_id=UTX04407.1;transl_table=11 CP101611.1 Genbank gene 2910860 2911198 . + . ID=gene-NM058_15185;Name=NM058_15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15185 CP101611.1 Protein Homology CDS 2910860 2911198 . + 0 ID=cds-UTX04408.1;Parent=gene-NM058_15185;Dbxref=NCBI_GP:UTX04408.1;Name=UTX04408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003239136.1;locus_tag=NM058_15185;product=helix-turn-helix domain-containing protein;protein_id=UTX04408.1;transl_table=11 CP101611.1 Genbank pseudogene 2911363 2911957 . + . ID=gene-NM058_15190;Name=NM058_15190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15190;pseudo=true CP101611.1 Protein Homology CDS 2911363 2911957 . + 0 ID=cds-NM058_15190;Parent=gene-NM058_15190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010333884.1;locus_tag=NM058_15190;product=ImmA/IrrE family metallo-endopeptidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2912002 2912838 . - . ID=gene-NM058_15195;Name=NM058_15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15195 CP101611.1 Protein Homology CDS 2912002 2912838 . - 0 ID=cds-UTX04409.1;Parent=gene-NM058_15195;Dbxref=NCBI_GP:UTX04409.1;Name=UTX04409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010333883.1;locus_tag=NM058_15195;product=manganese catalase family protein;protein_id=UTX04409.1;transl_table=11 CP101611.1 Genbank gene 2912912 2913514 . - . ID=gene-NM058_15200;Name=NM058_15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15200 CP101611.1 Protein Homology CDS 2912912 2913514 . - 0 ID=cds-UTX04410.1;Parent=gene-NM058_15200;Dbxref=NCBI_GP:UTX04410.1;Name=UTX04410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014476530.1;locus_tag=NM058_15200;product=poly-gamma-glutamate hydrolase family protein;protein_id=UTX04410.1;transl_table=11 CP101611.1 Genbank gene 2913620 2913997 . + . ID=gene-NM058_15205;Name=NM058_15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15205 CP101611.1 Protein Homology CDS 2913620 2913997 . + 0 ID=cds-UTX04411.1;Parent=gene-NM058_15205;Dbxref=NCBI_GP:UTX04411.1;Name=UTX04411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389129.1;locus_tag=NM058_15205;product=PH domain-containing protein;protein_id=UTX04411.1;transl_table=11 CP101611.1 Genbank gene 2914042 2914995 . - . ID=gene-NM058_15210;Name=NM058_15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15210 CP101611.1 Protein Homology CDS 2914042 2914995 . - 0 ID=cds-UTX04412.1;Parent=gene-NM058_15210;Dbxref=NCBI_GP:UTX04412.1;Name=UTX04412.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389128.1;locus_tag=NM058_15210;product=N-acetylmuramoyl-L-alanine amidase;protein_id=UTX04412.1;transl_table=11 CP101611.1 Genbank gene 2915118 2915372 . + . ID=gene-NM058_15215;Name=NM058_15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15215 CP101611.1 Protein Homology CDS 2915118 2915372 . + 0 ID=cds-UTX04413.1;Parent=gene-NM058_15215;Dbxref=NCBI_GP:UTX04413.1;Name=UTX04413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258131.1;locus_tag=NM058_15215;product=YciI family protein;protein_id=UTX04413.1;transl_table=11 CP101611.1 Genbank gene 2915401 2915535 . - . ID=gene-NM058_15220;Name=phrA;gbkey=Gene;gene=phrA;gene_biotype=protein_coding;locus_tag=NM058_15220 CP101611.1 Protein Homology CDS 2915401 2915535 . - 0 ID=cds-UTX04414.1;Parent=gene-NM058_15220;Dbxref=NCBI_GP:UTX04414.1;Name=UTX04414.1;gbkey=CDS;gene=phrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389126.1;locus_tag=NM058_15220;product=phosphatase RapA inhibitor PhrA;protein_id=UTX04414.1;transl_table=11 CP101611.1 Genbank pseudogene 2915525 2916660 . - . ID=gene-NM058_15225;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=pseudogene;locus_tag=NM058_15225;pseudo=true CP101611.1 Protein Homology CDS 2915525 2916660 . - 0 ID=cds-NM058_15225;Parent=gene-NM058_15225;Note=frameshifted;gbkey=CDS;gene=rapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389125.1;locus_tag=NM058_15225;product=response regulator aspartate phosphatase RapA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2916885 2917349 . + . ID=gene-NM058_15230;Name=NM058_15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15230 CP101611.1 Protein Homology CDS 2916885 2917349 . + 0 ID=cds-UTX04415.1;Parent=gene-NM058_15230;Dbxref=NCBI_GP:UTX04415.1;Name=UTX04415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389123.1;locus_tag=NM058_15230;product=DinB family protein;protein_id=UTX04415.1;transl_table=11 CP101611.1 Genbank gene 2917574 2918338 . + . ID=gene-NM058_15235;Name=NM058_15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15235 CP101611.1 Protein Homology CDS 2917574 2918338 . + 0 ID=cds-UTX04416.1;Parent=gene-NM058_15235;Dbxref=NCBI_GP:UTX04416.1;Name=UTX04416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389122.1;locus_tag=NM058_15235;product=sulfite exporter TauE/SafE family protein;protein_id=UTX04416.1;transl_table=11 CP101611.1 Genbank gene 2918376 2919869 . - . ID=gene-NM058_15240;Name=NM058_15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15240 CP101611.1 Protein Homology CDS 2918376 2919869 . - 0 ID=cds-UTX04417.1;Parent=gene-NM058_15240;Dbxref=NCBI_GP:UTX04417.1;Name=UTX04417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389121.2;locus_tag=NM058_15240;product=altronate dehydratase family protein;protein_id=UTX04417.1;transl_table=11 CP101611.1 Genbank gene 2919866 2921308 . - . ID=gene-NM058_15245;Name=NM058_15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15245 CP101611.1 Protein Homology CDS 2919866 2921308 . - 0 ID=cds-UTX04418.1;Parent=gene-NM058_15245;Dbxref=NCBI_GP:UTX04418.1;Name=UTX04418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389120.1;locus_tag=NM058_15245;product=tagaturonate reductase;protein_id=UTX04418.1;transl_table=11 CP101611.1 Genbank gene 2921386 2922384 . - . ID=gene-NM058_15250;Name=NM058_15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15250 CP101611.1 Protein Homology CDS 2921386 2922384 . - 0 ID=cds-UTX04419.1;Parent=gene-NM058_15250;Dbxref=NCBI_GP:UTX04419.1;Name=UTX04419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258126.1;locus_tag=NM058_15250;product=LacI family transcriptional regulator;protein_id=UTX04419.1;transl_table=11 CP101611.1 Genbank gene 2922472 2923740 . - . ID=gene-NM058_15255;Name=NM058_15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15255 CP101611.1 Protein Homology CDS 2922472 2923740 . - 0 ID=cds-UTX04420.1;Parent=gene-NM058_15255;Dbxref=NCBI_GP:UTX04420.1;Name=UTX04420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389118.1;locus_tag=NM058_15255;product=MFS transporter;protein_id=UTX04420.1;transl_table=11 CP101611.1 Genbank gene 2923788 2924624 . - . ID=gene-NM058_15260;Name=NM058_15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15260 CP101611.1 Protein Homology CDS 2923788 2924624 . - 0 ID=cds-UTX04421.1;Parent=gene-NM058_15260;Dbxref=NCBI_GP:UTX04421.1;Name=UTX04421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389117.1;locus_tag=NM058_15260;product=SDR family oxidoreductase;protein_id=UTX04421.1;transl_table=11 CP101611.1 Genbank gene 2924621 2925700 . - . ID=gene-NM058_15265;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=NM058_15265 CP101611.1 Protein Homology CDS 2924621 2925700 . - 0 ID=cds-UTX04422.1;Parent=gene-NM058_15265;Dbxref=NCBI_GP:UTX04422.1;Name=UTX04422.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389116.1;locus_tag=NM058_15265;product=mannonate dehydratase;protein_id=UTX04422.1;transl_table=11 CP101611.1 Genbank gene 2925725 2926744 . - . ID=gene-NM058_15270;Name=NM058_15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15270 CP101611.1 Protein Homology CDS 2925725 2926744 . - 0 ID=cds-UTX04423.1;Parent=gene-NM058_15270;Dbxref=NCBI_GP:UTX04423.1;Name=UTX04423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389115.1;locus_tag=NM058_15270;product=zinc-binding alcohol dehydrogenase family protein;protein_id=UTX04423.1;transl_table=11 CP101611.1 Genbank pseudogene 2926750 2927762 . - . ID=gene-NM058_15275;Name=allD;gbkey=Gene;gene=allD;gene_biotype=pseudogene;locus_tag=NM058_15275;pseudo=true CP101611.1 Protein Homology CDS 2926750 2927762 . - 0 ID=cds-NM058_15275;Parent=gene-NM058_15275;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=allD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389114.1;locus_tag=NM058_15275;product=ureidoglycolate dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2927867 2929246 . - . ID=gene-NM058_15280;Name=NM058_15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15280 CP101611.1 Protein Homology CDS 2927867 2929246 . - 0 ID=cds-UTX04424.1;Parent=gene-NM058_15280;Dbxref=NCBI_GP:UTX04424.1;Name=UTX04424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003239163.1;locus_tag=NM058_15280;product=MFS transporter;protein_id=UTX04424.1;transl_table=11 CP101611.1 Genbank pseudogene 2929329 2930749 . - . ID=gene-NM058_15285;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=pseudogene;locus_tag=NM058_15285;pseudo=true CP101611.1 Protein Homology CDS 2929329 2930749 . - 0 ID=cds-NM058_15285;Parent=gene-NM058_15285;Note=frameshifted;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389112.1;locus_tag=NM058_15285;product=glucuronate isomerase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2930948 2932126 . - . ID=gene-NM058_15290;Name=NM058_15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15290 CP101611.1 Protein Homology CDS 2930948 2932126 . - 0 ID=cds-UTX04425.1;Parent=gene-NM058_15290;Dbxref=NCBI_GP:UTX04425.1;Name=UTX04425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389111.1;locus_tag=NM058_15290;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=UTX04425.1;transl_table=11 CP101611.1 Genbank gene 2932166 2932588 . - . ID=gene-NM058_15295;Name=NM058_15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15295 CP101611.1 Protein Homology CDS 2932166 2932588 . - 0 ID=cds-UTX04426.1;Parent=gene-NM058_15295;Dbxref=NCBI_GP:UTX04426.1;Name=UTX04426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389110.1;locus_tag=NM058_15295;product=DUF1641 domain-containing protein;protein_id=UTX04426.1;transl_table=11 CP101611.1 Genbank pseudogene 2932979 2933474 . - . ID=gene-NM058_15300;Name=NM058_15300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15300;pseudo=true CP101611.1 Protein Homology CDS 2932979 2933474 . - 0 ID=cds-NM058_15300;Parent=gene-NM058_15300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389109.1;locus_tag=NM058_15300;product=cupin domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2933606 2934580 . + . ID=gene-NM058_15305;Name=NM058_15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15305 CP101611.1 Protein Homology CDS 2933606 2934580 . + 0 ID=cds-UTX04427.1;Parent=gene-NM058_15305;Dbxref=NCBI_GP:UTX04427.1;Name=UTX04427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389108.1;locus_tag=NM058_15305;product=multidrug resistance efflux transporter family protein;protein_id=UTX04427.1;transl_table=11 CP101611.1 Genbank gene 2934700 2935452 . + . ID=gene-NM058_15310;Name=NM058_15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15310 CP101611.1 Protein Homology CDS 2934700 2935452 . + 0 ID=cds-UTX04428.1;Parent=gene-NM058_15310;Dbxref=NCBI_GP:UTX04428.1;Name=UTX04428.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389107.1;locus_tag=NM058_15310;product=ATP-binding cassette domain-containing protein;protein_id=UTX04428.1;transl_table=11 CP101611.1 Genbank gene 2935452 2936204 . + . ID=gene-NM058_15315;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=NM058_15315 CP101611.1 Protein Homology CDS 2935452 2936204 . + 0 ID=cds-UTX04429.1;Parent=gene-NM058_15315;Dbxref=NCBI_GP:UTX04429.1;Name=UTX04429.1;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003239170.1;locus_tag=NM058_15315;product=iron export ABC transporter permease subunit FetB;protein_id=UTX04429.1;transl_table=11 CP101611.1 Genbank gene 2936249 2937061 . - . ID=gene-NM058_15320;Name=NM058_15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15320 CP101611.1 Protein Homology CDS 2936249 2937061 . - 0 ID=cds-UTX04430.1;Parent=gene-NM058_15320;Dbxref=NCBI_GP:UTX04430.1;Name=UTX04430.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389105.1;locus_tag=NM058_15320;product=uroporphyrinogen-III synthase;protein_id=UTX04430.1;transl_table=11 CP101611.1 Genbank gene 2937236 2937424 . + . ID=gene-NM058_15325;Name=NM058_15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15325 CP101611.1 Protein Homology CDS 2937236 2937424 . + 0 ID=cds-UTX04431.1;Parent=gene-NM058_15325;Dbxref=NCBI_GP:UTX04431.1;Name=UTX04431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097710.1;locus_tag=NM058_15325;product=hypothetical protein;protein_id=UTX04431.1;transl_table=11 CP101611.1 Genbank gene 2937466 2938644 . - . ID=gene-NM058_15330;Name=NM058_15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15330 CP101611.1 Protein Homology CDS 2937466 2938644 . - 0 ID=cds-UTX04432.1;Parent=gene-NM058_15330;Dbxref=NCBI_GP:UTX04432.1;Name=UTX04432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389104.1;locus_tag=NM058_15330;product=UDP-glucosyltransferase;protein_id=UTX04432.1;transl_table=11 CP101611.1 Genbank gene 2938665 2939852 . - . ID=gene-NM058_15335;Name=yjiB;gbkey=Gene;gene=yjiB;gene_biotype=protein_coding;locus_tag=NM058_15335 CP101611.1 Protein Homology CDS 2938665 2939852 . - 0 ID=cds-UTX04433.1;Parent=gene-NM058_15335;Dbxref=NCBI_GP:UTX04433.1;Name=UTX04433.1;gbkey=CDS;gene=yjiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389103.1;locus_tag=NM058_15335;product=monooxygenase YjiB;protein_id=UTX04433.1;transl_table=11 CP101611.1 Genbank gene 2940244 2940522 . + . ID=gene-NM058_15340;Name=NM058_15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15340 CP101611.1 Protein Homology CDS 2940244 2940522 . + 0 ID=cds-UTX04434.1;Parent=gene-NM058_15340;Dbxref=NCBI_GP:UTX04434.1;Name=UTX04434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389102.1;locus_tag=NM058_15340;product=hypothetical protein;protein_id=UTX04434.1;transl_table=11 CP101611.1 Genbank pseudogene 2940554 2941170 . - . ID=gene-NM058_15345;Name=NM058_15345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15345;pseudo=true CP101611.1 Protein Homology CDS 2940554 2941170 . - 0 ID=cds-NM058_15345;Parent=gene-NM058_15345;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003232794.1;locus_tag=NM058_15345;product=NUDIX hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2941264 2941851 . - . ID=gene-NM058_15350;Name=NM058_15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15350 CP101611.1 Protein Homology CDS 2941264 2941851 . - 0 ID=cds-UTX04435.1;Parent=gene-NM058_15350;Dbxref=NCBI_GP:UTX04435.1;Name=UTX04435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014113433.1;locus_tag=NM058_15350;product=DUF4352 domain-containing protein;protein_id=UTX04435.1;transl_table=11 CP101611.1 Genbank pseudogene 2942143 2942701 . - . ID=gene-NM058_15355;Name=NM058_15355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15355;pseudo=true CP101611.1 Protein Homology CDS 2942143 2942701 . - 0 ID=cds-NM058_15355;Parent=gene-NM058_15355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389099.1;locus_tag=NM058_15355;product=DUF1641 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2942694 2945650 . - . ID=gene-NM058_15360;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=pseudogene;locus_tag=NM058_15360;pseudo=true CP101611.1 Protein Homology CDS 2942694 2945650 . - 0 ID=cds-NM058_15360;Parent=gene-NM058_15360;Note=frameshifted;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389098.1;locus_tag=NM058_15360;product=formate dehydrogenase subunit alpha;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2945797 2946372 . + . ID=gene-NM058_15365;Name=NM058_15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15365 CP101611.1 Protein Homology CDS 2945797 2946372 . + 0 ID=cds-UTX04436.1;Parent=gene-NM058_15365;Dbxref=NCBI_GP:UTX04436.1;Name=UTX04436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389097.1;locus_tag=NM058_15365;product=YjgB family protein;protein_id=UTX04436.1;transl_table=11 CP101611.1 Genbank gene 2946474 2946872 . + . ID=gene-NM058_15370;Name=NM058_15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15370 CP101611.1 Protein Homology CDS 2946474 2946872 . + 0 ID=cds-UTX04437.1;Parent=gene-NM058_15370;Dbxref=NCBI_GP:UTX04437.1;Name=UTX04437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389096.1;locus_tag=NM058_15370;product=DUF2809 domain-containing protein;protein_id=UTX04437.1;transl_table=11 CP101611.1 Genbank gene 2946881 2947777 . - . ID=gene-NM058_15375;Name=NM058_15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15375 CP101611.1 Protein Homology CDS 2946881 2947777 . - 0 ID=cds-UTX04438.1;Parent=gene-NM058_15375;Dbxref=NCBI_GP:UTX04438.1;Name=UTX04438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014479519.1;locus_tag=NM058_15375;product=DUF2268 domain-containing protein;protein_id=UTX04438.1;transl_table=11 CP101611.1 Genbank pseudogene 2947904 2948070 . + . ID=gene-NM058_15380;Name=NM058_15380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15380;pseudo=true CP101611.1 Protein Homology CDS 2947904 2948070 . + 0 ID=cds-NM058_15380;Parent=gene-NM058_15380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389094.1;locus_tag=NM058_15380;product=YjfB family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2948199 2948672 . + . ID=gene-NM058_15385;Name=NM058_15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15385 CP101611.1 Protein Homology CDS 2948199 2948672 . + 0 ID=cds-UTX04439.1;Parent=gene-NM058_15385;Dbxref=NCBI_GP:UTX04439.1;Name=UTX04439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389093.1;locus_tag=NM058_15385;product=YjfA family protein;protein_id=UTX04439.1;transl_table=11 CP101611.1 Genbank gene 2948720 2950120 . - . ID=gene-NM058_15390;Name=pdaC;gbkey=Gene;gene=pdaC;gene_biotype=protein_coding;locus_tag=NM058_15390 CP101611.1 Protein Homology CDS 2948720 2950120 . - 0 ID=cds-UTX04440.1;Parent=gene-NM058_15390;Dbxref=NCBI_GP:UTX04440.1;Name=UTX04440.1;gbkey=CDS;gene=pdaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003239194.1;locus_tag=NM058_15390;product=peptidoglycan-N-acetylmuramic acid deacetylase PdaC;protein_id=UTX04440.1;transl_table=11 CP101611.1 Genbank gene 2950375 2950623 . + . ID=gene-NM058_15395;Name=cotT;gbkey=Gene;gene=cotT;gene_biotype=protein_coding;locus_tag=NM058_15395 CP101611.1 Protein Homology CDS 2950375 2950623 . + 0 ID=cds-UTX04441.1;Parent=gene-NM058_15395;Dbxref=NCBI_GP:UTX04441.1;Name=UTX04441.1;gbkey=CDS;gene=cotT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389091.2;locus_tag=NM058_15395;product=spore coat protein CotT;protein_id=UTX04441.1;transl_table=11 CP101611.1 Genbank pseudogene 2950746 2951734 . + . ID=gene-NM058_15400;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=pseudogene;locus_tag=NM058_15400;pseudo=true CP101611.1 Protein Homology CDS 2950746 2951734 . + 0 ID=cds-NM058_15400;Parent=gene-NM058_15400;Note=frameshifted;Ontology_term=GO:0006783,GO:0008495;gbkey=CDS;gene=cyoE;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389090.2;locus_tag=NM058_15400;product=heme o synthase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2952323 2952652 . + . ID=gene-NM058_15405;Name=NM058_15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15405 CP101611.1 Protein Homology CDS 2952323 2952652 . + 0 ID=cds-UTX04442.1;Parent=gene-NM058_15405;Dbxref=NCBI_GP:UTX04442.1;Name=UTX04442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389089.1;locus_tag=NM058_15405;product=YjdJ family protein;protein_id=UTX04442.1;transl_table=11 CP101611.1 Genbank gene 2952960 2953154 . + . ID=gene-NM058_15410;Name=NM058_15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15410 CP101611.1 Protein Homology CDS 2952960 2953154 . + 0 ID=cds-UTX04443.1;Parent=gene-NM058_15410;Dbxref=NCBI_GP:UTX04443.1;Name=UTX04443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097709.1;locus_tag=NM058_15410;product=DUF4177 domain-containing protein;protein_id=UTX04443.1;transl_table=11 CP101611.1 Genbank pseudogene 2953185 2953666 . - . ID=gene-NM058_15415;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=pseudogene;locus_tag=NM058_15415;pseudo=true CP101611.1 Protein Homology CDS 2953185 2953666 . - 0 ID=cds-NM058_15415;Parent=gene-NM058_15415;Note=frameshifted;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389088.1;locus_tag=NM058_15415;product=Cys-tRNA(Pro) deacylase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2953928 2954323 . + . ID=gene-NM058_15420;Name=NM058_15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15420 CP101611.1 Protein Homology CDS 2953928 2954323 . + 0 ID=cds-UTX04444.1;Parent=gene-NM058_15420;Dbxref=NCBI_GP:UTX04444.1;Name=UTX04444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389087.2;locus_tag=NM058_15420;product=hypothetical protein;protein_id=UTX04444.1;transl_table=11 CP101611.1 Genbank gene 2954618 2955124 . + . ID=gene-NM058_15425;Name=NM058_15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15425 CP101611.1 Protein Homology CDS 2954618 2955124 . + 0 ID=cds-UTX04445.1;Parent=gene-NM058_15425;Dbxref=NCBI_GP:UTX04445.1;Name=UTX04445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258095.1;locus_tag=NM058_15425;product=GNAT family N-acetyltransferase;protein_id=UTX04445.1;transl_table=11 CP101611.1 Genbank gene 2955237 2955521 . - . ID=gene-NM058_15430;Name=NM058_15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15430 CP101611.1 Protein Homology CDS 2955237 2955521 . - 0 ID=cds-UTX07064.1;Parent=gene-NM058_15430;Dbxref=NCBI_GP:UTX07064.1;Name=UTX07064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003224712.1;locus_tag=NM058_15430;product=hypothetical protein;protein_id=UTX07064.1;transl_table=11 CP101611.1 Genbank gene 2955699 2955917 . + . ID=gene-NM058_15435;Name=NM058_15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15435 CP101611.1 GeneMarkS-2+ CDS 2955699 2955917 . + 0 ID=cds-UTX04446.1;Parent=gene-NM058_15435;Dbxref=NCBI_GP:UTX04446.1;Name=UTX04446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_15435;product=hypothetical protein;protein_id=UTX04446.1;transl_table=11 CP101611.1 Genbank gene 2956136 2957083 . - . ID=gene-NM058_15440;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=NM058_15440 CP101611.1 Protein Homology CDS 2956136 2957083 . - 0 ID=cds-UTX04447.1;Parent=gene-NM058_15440;Dbxref=NCBI_GP:UTX04447.1;Name=UTX04447.1;Ontology_term=GO:0005975,GO:0004476;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389084.1;locus_tag=NM058_15440;product=mannose-6-phosphate isomerase%2C class I;protein_id=UTX04447.1;transl_table=11 CP101611.1 Genbank pseudogene 2957099 2959047 . - . ID=gene-NM058_15445;Name=NM058_15445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15445;pseudo=true CP101611.1 Protein Homology CDS 2957099 2959047 . - 0 ID=cds-NM058_15445;Parent=gene-NM058_15445;Note=frameshifted;Ontology_term=GO:0009401,GO:0022877,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258090.1;locus_tag=NM058_15445;product=fructose-specific PTS transporter subunit EIIC;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2959198 2961147 . - . ID=gene-NM058_15450;Name=NM058_15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15450 CP101611.1 Protein Homology CDS 2959198 2961147 . - 0 ID=cds-UTX04448.1;Parent=gene-NM058_15450;Dbxref=NCBI_GP:UTX04448.1;Name=UTX04448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389082.2;locus_tag=NM058_15450;product=BglG family transcription antiterminator;protein_id=UTX04448.1;transl_table=11 CP101611.1 Genbank gene 2961719 2961988 . + . ID=gene-NM058_15455;Name=NM058_15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15455 CP101611.1 Protein Homology CDS 2961719 2961988 . + 0 ID=cds-UTX04449.1;Parent=gene-NM058_15455;Dbxref=NCBI_GP:UTX04449.1;Name=UTX04449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015240073.1;locus_tag=NM058_15455;product=hypothetical protein;protein_id=UTX04449.1;transl_table=11 CP101611.1 Genbank gene 2962133 2962888 . - . ID=gene-NM058_15460;Name=NM058_15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15460 CP101611.1 Protein Homology CDS 2962133 2962888 . - 0 ID=cds-UTX04450.1;Parent=gene-NM058_15460;Dbxref=NCBI_GP:UTX04450.1;Name=UTX04450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389080.1;locus_tag=NM058_15460;product=SDR family oxidoreductase;protein_id=UTX04450.1;transl_table=11 CP101611.1 Genbank pseudogene 2963114 2963446 . + . ID=gene-NM058_15465;Name=NM058_15465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15465;pseudo=true CP101611.1 Protein Homology CDS 2963114 2963446 . + 0 ID=cds-NM058_15465;Parent=gene-NM058_15465;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014477422.1;locus_tag=NM058_15465;product=tRNA-Val4;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 2963481 2963778 . + . ID=gene-NM058_15470;Name=NM058_15470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15470;pseudo=true CP101611.1 Protein Homology CDS 2963481 2963778 . + 0 ID=cds-NM058_15470;Parent=gene-NM058_15470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014304563.1;locus_tag=NM058_15470;product=contact-dependent growth inhibition system immunity protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2964002 2964322 . - . ID=gene-NM058_15475;Name=NM058_15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15475 CP101611.1 Protein Homology CDS 2964002 2964322 . - 0 ID=cds-UTX04451.1;Parent=gene-NM058_15475;Dbxref=NCBI_GP:UTX04451.1;Name=UTX04451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389079.1;locus_tag=NM058_15475;product=antibiotic biosynthesis monooxygenase;protein_id=UTX04451.1;transl_table=11 CP101611.1 Genbank gene 2964614 2964686 . - . ID=gene-NM058_15480;Name=NM058_15480;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_15480 CP101611.1 tRNAscan-SE tRNA 2964614 2964686 . - . ID=rna-NM058_15480;Parent=gene-NM058_15480;anticodon=(pos:complement(2964651..2964653));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_15480;product=tRNA-Val CP101611.1 tRNAscan-SE exon 2964614 2964686 . - . ID=exon-NM058_15480-1;Parent=rna-NM058_15480;anticodon=(pos:complement(2964651..2964653));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_15480;product=tRNA-Val CP101611.1 Genbank pseudogene 2964860 2966049 . + . ID=gene-NM058_15485;Name=NM058_15485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15485;pseudo=true CP101611.1 Protein Homology CDS 2964860 2966049 . + 0 ID=cds-NM058_15485;Parent=gene-NM058_15485;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389072.1;locus_tag=NM058_15485;product=DUF819 family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2966119 2966661 . + . ID=gene-NM058_15490;Name=NM058_15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15490 CP101611.1 Protein Homology CDS 2966119 2966661 . + 0 ID=cds-UTX04452.1;Parent=gene-NM058_15490;Dbxref=NCBI_GP:UTX04452.1;Name=UTX04452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014113411.1;locus_tag=NM058_15490;product=GNAT family N-acetyltransferase;protein_id=UTX04452.1;transl_table=11 CP101611.1 Genbank gene 2966694 2967866 . - . ID=gene-NM058_15495;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=NM058_15495 CP101611.1 Protein Homology CDS 2966694 2967866 . - 0 ID=cds-UTX04453.1;Parent=gene-NM058_15495;Dbxref=NCBI_GP:UTX04453.1;Name=UTX04453.1;gbkey=CDS;gene=metC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389070.1;locus_tag=NM058_15495;product=cystathionine beta-lyase;protein_id=UTX04453.1;transl_table=11 CP101611.1 Genbank pseudogene 2967859 2968978 . - . ID=gene-NM058_15500;Name=metI;gbkey=Gene;gene=metI;gene_biotype=pseudogene;locus_tag=NM058_15500;pseudo=true CP101611.1 Protein Homology CDS 2967859 2968978 . - 0 ID=cds-NM058_15500;Parent=gene-NM058_15500;Note=frameshifted;gbkey=CDS;gene=metI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389069.1;locus_tag=NM058_15500;product=cystathionine gamma-synthase/O-acetylhomoserine thiolyase;pseudo=true;transl_table=11 CP101611.1 cmsearch riboswitch 2969047 2969167 . - . ID=id-CP101611.1:2969047..2969167;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 2969335 2970057 . + . ID=gene-NM058_15505;Name=NM058_15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15505 CP101611.1 Protein Homology CDS 2969335 2970057 . + 0 ID=cds-UTX04454.1;Parent=gene-NM058_15505;Dbxref=NCBI_GP:UTX04454.1;Name=UTX04454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389068.1;locus_tag=NM058_15505;product=esterase family protein;protein_id=UTX04454.1;transl_table=11 CP101611.1 Genbank gene 2970094 2970609 . + . ID=gene-NM058_15510;Name=NM058_15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15510 CP101611.1 Protein Homology CDS 2970094 2970609 . + 0 ID=cds-UTX04455.1;Parent=gene-NM058_15510;Dbxref=NCBI_GP:UTX04455.1;Name=UTX04455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389067.1;locus_tag=NM058_15510;product=YjcG family protein;protein_id=UTX04455.1;transl_table=11 CP101611.1 Genbank gene 2970615 2971037 . + . ID=gene-NM058_15515;Name=NM058_15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15515 CP101611.1 Protein Homology CDS 2970615 2971037 . + 0 ID=cds-UTX04456.1;Parent=gene-NM058_15515;Dbxref=NCBI_GP:UTX04456.1;Name=UTX04456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389066.1;locus_tag=NM058_15515;product=GNAT family N-acetyltransferase;protein_id=UTX04456.1;transl_table=11 CP101611.1 Genbank gene 2971110 2971364 . - . ID=gene-NM058_15520;Name=NM058_15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15520 CP101611.1 Protein Homology CDS 2971110 2971364 . - 0 ID=cds-UTX04457.1;Parent=gene-NM058_15520;Dbxref=NCBI_GP:UTX04457.1;Name=UTX04457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097706.1;locus_tag=NM058_15520;product=hypothetical protein;protein_id=UTX04457.1;transl_table=11 CP101611.1 Genbank pseudogene 2971483 2973757 . + . ID=gene-NM058_15525;Name=NM058_15525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15525;pseudo=true CP101611.1 Protein Homology CDS 2971483 2973757 . + 0 ID=cds-NM058_15525;Parent=gene-NM058_15525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389064.3;locus_tag=NM058_15525;product=ATP-dependent helicase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2973836 2974090 . - . ID=gene-NM058_15530;Name=spoVIF;gbkey=Gene;gene=spoVIF;gene_biotype=protein_coding;locus_tag=NM058_15530 CP101611.1 Protein Homology CDS 2973836 2974090 . - 0 ID=cds-UTX04458.1;Parent=gene-NM058_15530;Dbxref=NCBI_GP:UTX04458.1;Name=UTX04458.1;gbkey=CDS;gene=spoVIF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389063.2;locus_tag=NM058_15530;product=sporulation-specific transcription regulator SopVIF;protein_id=UTX04458.1;transl_table=11 CP101611.1 Genbank gene 2974223 2974378 . - . ID=gene-NM058_15535;Name=yjcZ;gbkey=Gene;gene=yjcZ;gene_biotype=protein_coding;locus_tag=NM058_15535 CP101611.1 Protein Homology CDS 2974223 2974378 . - 0 ID=cds-UTX04459.1;Parent=gene-NM058_15535;Dbxref=NCBI_GP:UTX04459.1;Name=UTX04459.1;gbkey=CDS;gene=yjcZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014113402.1;locus_tag=NM058_15535;product=sporulation protein YjcZ;protein_id=UTX04459.1;transl_table=11 CP101611.1 Genbank gene 2974460 2974666 . - . ID=gene-NM058_15540;Name=NM058_15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15540 CP101611.1 Protein Homology CDS 2974460 2974666 . - 0 ID=cds-UTX04460.1;Parent=gene-NM058_15540;Dbxref=NCBI_GP:UTX04460.1;Name=UTX04460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097704.1;locus_tag=NM058_15540;product=hypothetical protein;protein_id=UTX04460.1;transl_table=11 CP101611.1 Genbank gene 2974950 2975306 . - . ID=gene-NM058_15545;Name=yjcA;gbkey=Gene;gene=yjcA;gene_biotype=protein_coding;locus_tag=NM058_15545 CP101611.1 Protein Homology CDS 2974950 2975306 . - 0 ID=cds-UTX04461.1;Parent=gene-NM058_15545;Dbxref=NCBI_GP:UTX04461.1;Name=UTX04461.1;gbkey=CDS;gene=yjcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389061.1;locus_tag=NM058_15545;product=sporulation protein YjcA;protein_id=UTX04461.1;transl_table=11 CP101611.1 Genbank gene 2975466 2975852 . + . ID=gene-NM058_15550;Name=NM058_15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15550 CP101611.1 Protein Homology CDS 2975466 2975852 . + 0 ID=cds-UTX04462.1;Parent=gene-NM058_15550;Dbxref=NCBI_GP:UTX04462.1;Name=UTX04462.1;Ontology_term=GO:0030435,GO:0031160;gbkey=CDS;go_component=spore wall|0031160||IEA;go_process=sporulation resulting in formation of a cellular spore|0030435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389060.1;locus_tag=NM058_15550;product=spore coat protein;protein_id=UTX04462.1;transl_table=11 CP101611.1 Genbank gene 2975893 2976216 . + . ID=gene-NM058_15555;Name=NM058_15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15555 CP101611.1 Protein Homology CDS 2975893 2976216 . + 0 ID=cds-UTX04463.1;Parent=gene-NM058_15555;Dbxref=NCBI_GP:UTX04463.1;Name=UTX04463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010329408.1;locus_tag=NM058_15555;product=spore coat protein;protein_id=UTX04463.1;transl_table=11 CP101611.1 Genbank gene 2976310 2976825 . + . ID=gene-NM058_15560;Name=NM058_15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15560 CP101611.1 Protein Homology CDS 2976310 2976825 . + 0 ID=cds-UTX04464.1;Parent=gene-NM058_15560;Dbxref=NCBI_GP:UTX04464.1;Name=UTX04464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389058.1;locus_tag=NM058_15560;product=spore coat protein;protein_id=UTX04464.1;transl_table=11 CP101611.1 Genbank gene 2976976 2977464 . + . ID=gene-NM058_15565;Name=cotY;gbkey=Gene;gene=cotY;gene_biotype=protein_coding;locus_tag=NM058_15565 CP101611.1 Protein Homology CDS 2976976 2977464 . + 0 ID=cds-UTX04465.1;Parent=gene-NM058_15565;Dbxref=NCBI_GP:UTX04465.1;Name=UTX04465.1;gbkey=CDS;gene=cotY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389057.1;locus_tag=NM058_15565;product=spore coat protein CotY;protein_id=UTX04465.1;transl_table=11 CP101611.1 Genbank gene 2977592 2978041 . + . ID=gene-NM058_15570;Name=cotZ;gbkey=Gene;gene=cotZ;gene_biotype=protein_coding;locus_tag=NM058_15570 CP101611.1 Protein Homology CDS 2977592 2978041 . + 0 ID=cds-UTX04466.1;Parent=gene-NM058_15570;Dbxref=NCBI_GP:UTX04466.1;Name=UTX04466.1;gbkey=CDS;gene=cotZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014113394.1;locus_tag=NM058_15570;product=spore coat protein CotZ;protein_id=UTX04466.1;transl_table=11 CP101611.1 Genbank gene 2978132 2978815 . - . ID=gene-NM058_15575;Name=NM058_15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15575 CP101611.1 Protein Homology CDS 2978132 2978815 . - 0 ID=cds-UTX04467.1;Parent=gene-NM058_15575;Dbxref=NCBI_GP:UTX04467.1;Name=UTX04467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389055.1;locus_tag=NM058_15575;product=spore coat CotO family protein;protein_id=UTX04467.1;transl_table=11 CP101611.1 Genbank gene 2978917 2979693 . - . ID=gene-NM058_15580;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=NM058_15580 CP101611.1 Protein Homology CDS 2978917 2979693 . - 0 ID=cds-UTX04468.1;Parent=gene-NM058_15580;Dbxref=NCBI_GP:UTX04468.1;Name=UTX04468.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabI;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389054.2;locus_tag=NM058_15580;product=enoyl-ACP reductase FabI;protein_id=UTX04468.1;transl_table=11 CP101611.1 Genbank pseudogene 2979829 2980643 . - . ID=gene-NM058_15585;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=pseudogene;locus_tag=NM058_15585;pseudo=true CP101611.1 Protein Homology CDS 2979829 2980643 . - 0 ID=cds-NM058_15585;Parent=gene-NM058_15585;Note=frameshifted;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389053.1;locus_tag=NM058_15585;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2980662 2981672 . - . ID=gene-NM058_15590;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=NM058_15590 CP101611.1 Protein Homology CDS 2980662 2981672 . - 0 ID=cds-UTX04469.1;Parent=gene-NM058_15590;Dbxref=NCBI_GP:UTX04469.1;Name=UTX04469.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389052.1;locus_tag=NM058_15590;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=UTX04469.1;transl_table=11 CP101611.1 Genbank gene 2981669 2982439 . - . ID=gene-NM058_15595;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=NM058_15595 CP101611.1 Protein Homology CDS 2981669 2982439 . - 0 ID=cds-UTX04470.1;Parent=gene-NM058_15595;Dbxref=NCBI_GP:UTX04470.1;Name=UTX04470.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389051.1;locus_tag=NM058_15595;product=thiazole synthase;protein_id=UTX04470.1;transl_table=11 CP101611.1 Genbank gene 2982436 2982636 . - . ID=gene-NM058_15600;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=NM058_15600 CP101611.1 Protein Homology CDS 2982436 2982636 . - 0 ID=cds-UTX07065.1;Parent=gene-NM058_15600;Dbxref=NCBI_GP:UTX07065.1;Name=UTX07065.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389050.1;locus_tag=NM058_15600;product=sulfur carrier protein ThiS;protein_id=UTX07065.1;transl_table=11 CP101611.1 Genbank gene 2982636 2983745 . - . ID=gene-NM058_15605;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=NM058_15605 CP101611.1 Protein Homology CDS 2982636 2983745 . - 0 ID=cds-UTX04471.1;Parent=gene-NM058_15605;Dbxref=NCBI_GP:UTX04471.1;Name=UTX04471.1;Ontology_term=GO:0016647;gbkey=CDS;gene=thiO;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C oxygen as acceptor|0016647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389049.1;locus_tag=NM058_15605;product=glycine oxidase ThiO;protein_id=UTX04471.1;transl_table=11 CP101611.1 Genbank pseudogene 2983729 2984345 . - . ID=gene-NM058_15610;Name=tenI;gbkey=Gene;gene=tenI;gene_biotype=pseudogene;locus_tag=NM058_15610;pseudo=true CP101611.1 Protein Homology CDS 2983729 2984345 . - 0 ID=cds-NM058_15610;Parent=gene-NM058_15610;Note=frameshifted;gbkey=CDS;gene=tenI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389048.1;locus_tag=NM058_15610;product=thiazole tautomerase TenI;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2984323 2985030 . - . ID=gene-NM058_15615;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=NM058_15615 CP101611.1 Protein Homology CDS 2984323 2985030 . - 0 ID=cds-UTX04472.1;Parent=gene-NM058_15615;Dbxref=NCBI_GP:UTX04472.1;Name=UTX04472.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014113386.1;locus_tag=NM058_15615;product=thiaminase II;protein_id=UTX04472.1;transl_table=11 CP101611.1 cmsearch riboswitch 2985112 2985220 . - . ID=id-CP101611.1:2985112..2985220;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank pseudogene 2985282 2987124 . - . ID=gene-NM058_15620;Name=NM058_15620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15620;pseudo=true CP101611.1 Protein Homology CDS 2985282 2987124 . - 0 ID=cds-NM058_15620;Parent=gene-NM058_15620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389046.1;locus_tag=NM058_15620;product=monovalent cation:proton antiporter family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2987356 2988090 . + . ID=gene-NM058_15625;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=NM058_15625 CP101611.1 Protein Homology CDS 2987356 2988090 . + 0 ID=cds-UTX04473.1;Parent=gene-NM058_15625;Dbxref=NCBI_GP:UTX04473.1;Name=UTX04473.1;gbkey=CDS;gene=prpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389045.1;locus_tag=NM058_15625;product=bis(5'-nucleosyl)-tetraphosphatase PrpE;protein_id=UTX04473.1;transl_table=11 CP101611.1 Genbank gene 2988328 2989215 . - . ID=gene-NM058_15630;Name=NM058_15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15630 CP101611.1 Protein Homology CDS 2988328 2989215 . - 0 ID=cds-UTX04474.1;Parent=gene-NM058_15630;Dbxref=NCBI_GP:UTX04474.1;Name=UTX04474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003239261.1;locus_tag=NM058_15630;product=RluA family pseudouridine synthase;protein_id=UTX04474.1;transl_table=11 CP101611.1 Genbank gene 2989230 2990030 . - . ID=gene-NM058_15635;Name=NM058_15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15635 CP101611.1 Protein Homology CDS 2989230 2990030 . - 0 ID=cds-UTX04475.1;Parent=gene-NM058_15635;Dbxref=NCBI_GP:UTX04475.1;Name=UTX04475.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389043.1;locus_tag=NM058_15635;product=NAD kinase;protein_id=UTX04475.1;transl_table=11 CP101611.1 Genbank gene 2990049 2990684 . - . ID=gene-NM058_15640;Name=yjbM;gbkey=Gene;gene=yjbM;gene_biotype=protein_coding;locus_tag=NM058_15640 CP101611.1 Protein Homology CDS 2990049 2990684 . - 0 ID=cds-UTX07066.1;Parent=gene-NM058_15640;Dbxref=NCBI_GP:UTX07066.1;Name=UTX07066.1;gbkey=CDS;gene=yjbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389042.1;locus_tag=NM058_15640;product=GTP diphosphokinase;protein_id=UTX07066.1;transl_table=11 CP101611.1 Genbank gene 2990713 2991081 . - . ID=gene-NM058_15645;Name=NM058_15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15645 CP101611.1 Protein Homology CDS 2990713 2991081 . - 0 ID=cds-UTX04476.1;Parent=gene-NM058_15645;Dbxref=NCBI_GP:UTX04476.1;Name=UTX04476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389041.1;locus_tag=NM058_15645;product=hypothetical protein;protein_id=UTX04476.1;transl_table=11 CP101611.1 Genbank gene 2991205 2991777 . + . ID=gene-NM058_15650;Name=NM058_15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15650 CP101611.1 Protein Homology CDS 2991205 2991777 . + 0 ID=cds-UTX04477.1;Parent=gene-NM058_15650;Dbxref=NCBI_GP:UTX04477.1;Name=UTX04477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389040.1;locus_tag=NM058_15650;product=CYTH domain-containing protein;protein_id=UTX04477.1;transl_table=11 CP101611.1 Genbank gene 2991792 2992529 . + . ID=gene-NM058_15655;Name=NM058_15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15655 CP101611.1 Protein Homology CDS 2991792 2992529 . + 0 ID=cds-UTX04478.1;Parent=gene-NM058_15655;Dbxref=NCBI_GP:UTX04478.1;Name=UTX04478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003245645.1;locus_tag=NM058_15655;product=lytic transglycosylase domain-containing protein;protein_id=UTX04478.1;transl_table=11 CP101611.1 Genbank gene 2992785 2993183 . + . ID=gene-NM058_15660;Name=NM058_15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15660 CP101611.1 Protein Homology CDS 2992785 2993183 . + 0 ID=cds-UTX04479.1;Parent=gene-NM058_15660;Dbxref=NCBI_GP:UTX04479.1;Name=UTX04479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389038.1;locus_tag=NM058_15660;product=thiol management oxidoreductase;protein_id=UTX04479.1;transl_table=11 CP101611.1 Genbank gene 2993180 2994079 . + . ID=gene-NM058_15665;Name=spxH;gbkey=Gene;gene=spxH;gene_biotype=protein_coding;gene_synonym=yjbH;locus_tag=NM058_15665 CP101611.1 Protein Homology CDS 2993180 2994079 . + 0 ID=cds-UTX04480.1;Parent=gene-NM058_15665;Dbxref=NCBI_GP:UTX04480.1;Name=UTX04480.1;gbkey=CDS;gene=spxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389037.2;locus_tag=NM058_15665;product=protease adaptor protein SpxH;protein_id=UTX04480.1;transl_table=11 CP101611.1 Genbank gene 2994393 2994560 . + . ID=gene-NM058_15670;Name=NM058_15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15670 CP101611.1 Protein Homology CDS 2994393 2994560 . + 0 ID=cds-UTX04481.1;Parent=gene-NM058_15670;Dbxref=NCBI_GP:UTX04481.1;Name=UTX04481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097703.1;locus_tag=NM058_15670;product=hypothetical protein;protein_id=UTX04481.1;transl_table=11 CP101611.1 Genbank gene 2994598 2996427 . - . ID=gene-NM058_15675;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=NM058_15675 CP101611.1 Protein Homology CDS 2994598 2996427 . - 0 ID=cds-UTX07067.1;Parent=gene-NM058_15675;Dbxref=NCBI_GP:UTX07067.1;Name=UTX07067.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003155028.1;locus_tag=NM058_15675;product=oligoendopeptidase F;protein_id=UTX07067.1;transl_table=11 CP101611.1 Genbank pseudogene 2996657 2997776 . - . ID=gene-NM058_15680;Name=NM058_15680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15680;pseudo=true CP101611.1 Protein Homology CDS 2996657 2997776 . - 0 ID=cds-NM058_15680;Parent=gene-NM058_15680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010886479.1;locus_tag=NM058_15680;product=competence protein CoiA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2997966 2998622 . - . ID=gene-NM058_15685;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=NM058_15685 CP101611.1 Protein Homology CDS 2997966 2998622 . - 0 ID=cds-UTX04482.1;Parent=gene-NM058_15685;Dbxref=NCBI_GP:UTX04482.1;Name=UTX04482.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389034.1;locus_tag=NM058_15685;product=adaptor protein MecA;protein_id=UTX04482.1;transl_table=11 CP101611.1 Genbank gene 2998589 2998714 . - . ID=gene-NM058_15690;Name=NM058_15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15690 CP101611.1 Protein Homology CDS 2998589 2998714 . - 0 ID=cds-UTX04483.1;Parent=gene-NM058_15690;Dbxref=NCBI_GP:UTX04483.1;Name=UTX04483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513949.1;locus_tag=NM058_15690;product=hypothetical protein;protein_id=UTX04483.1;transl_table=11 CP101611.1 Genbank pseudogene 2998899 2999552 . + . ID=gene-NM058_15695;Name=NM058_15695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15695;pseudo=true CP101611.1 Protein Homology CDS 2998899 2999552 . + 0 ID=cds-NM058_15695;Parent=gene-NM058_15695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389033.1;locus_tag=NM058_15695;product=TerC family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 2999595 2999990 . - . ID=gene-NM058_15700;Name=spx;gbkey=Gene;gene=spx;gene_biotype=protein_coding;locus_tag=NM058_15700 CP101611.1 Protein Homology CDS 2999595 2999990 . - 0 ID=cds-UTX04484.1;Parent=gene-NM058_15700;Dbxref=NCBI_GP:UTX04484.1;Name=UTX04484.1;gbkey=CDS;gene=spx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389032.1;locus_tag=NM058_15700;product=transcriptional regulator Spx;protein_id=UTX04484.1;transl_table=11 CP101611.1 Genbank gene 3000171 3000749 . - . ID=gene-NM058_15705;Name=NM058_15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15705 CP101611.1 Protein Homology CDS 3000171 3000749 . - 0 ID=cds-UTX04485.1;Parent=gene-NM058_15705;Dbxref=NCBI_GP:UTX04485.1;Name=UTX04485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389031.2;locus_tag=NM058_15705;product=GNAT family N-acetyltransferase;protein_id=UTX04485.1;transl_table=11 CP101611.1 Genbank pseudogene 3000924 3002141 . - . ID=gene-NM058_15710;Name=NM058_15710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15710;pseudo=true CP101611.1 Protein Homology CDS 3000924 3002141 . - 0 ID=cds-NM058_15710;Parent=gene-NM058_15710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389030.2;locus_tag=NM058_15710;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3002248 3003165 . - . ID=gene-NM058_15715;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=NM058_15715 CP101611.1 Protein Homology CDS 3002248 3003165 . - 0 ID=cds-UTX04486.1;Parent=gene-NM058_15715;Dbxref=NCBI_GP:UTX04486.1;Name=UTX04486.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389029.1;locus_tag=NM058_15715;product=oligopeptide ABC transporter ATP-binding protein OppF;protein_id=UTX04486.1;transl_table=11 CP101611.1 Genbank pseudogene 3003167 3004237 . - . ID=gene-NM058_15720;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=pseudogene;locus_tag=NM058_15720;pseudo=true CP101611.1 Protein Homology CDS 3003167 3004237 . - 0 ID=cds-NM058_15720;Parent=gene-NM058_15720;Note=frameshifted;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389028.1;locus_tag=NM058_15720;product=oligopeptide ABC transporter ATP-binding protein OppD;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3004242 3005159 . - . ID=gene-NM058_15725;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=NM058_15725 CP101611.1 Protein Homology CDS 3004242 3005159 . - 0 ID=cds-UTX04487.1;Parent=gene-NM058_15725;Dbxref=NCBI_GP:UTX04487.1;Name=UTX04487.1;gbkey=CDS;gene=oppC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389027.1;locus_tag=NM058_15725;product=oligopeptide ABC transporter permease OppC;protein_id=UTX04487.1;transl_table=11 CP101611.1 Genbank gene 3005163 3006098 . - . ID=gene-NM058_15730;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=NM058_15730 CP101611.1 Protein Homology CDS 3005163 3006098 . - 0 ID=cds-UTX04488.1;Parent=gene-NM058_15730;Dbxref=NCBI_GP:UTX04488.1;Name=UTX04488.1;gbkey=CDS;gene=oppB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389026.1;locus_tag=NM058_15730;product=oligopeptide ABC transporter permease OppB;protein_id=UTX04488.1;transl_table=11 CP101611.1 Genbank gene 3006206 3007843 . - . ID=gene-NM058_15735;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=NM058_15735 CP101611.1 Protein Homology CDS 3006206 3007843 . - 0 ID=cds-UTX04489.1;Parent=gene-NM058_15735;Dbxref=NCBI_GP:UTX04489.1;Name=UTX04489.1;gbkey=CDS;gene=oppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389025.1;locus_tag=NM058_15735;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=UTX04489.1;transl_table=11 CP101611.1 cmsearch binding_site 3008315 3008527 . + . ID=id-CP101611.1:3008315..3008527;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 CP101611.1 Genbank gene 3008585 3009577 . + . ID=gene-NM058_15740;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=NM058_15740 CP101611.1 Protein Homology CDS 3008585 3009577 . + 0 ID=cds-UTX04490.1;Parent=gene-NM058_15740;Dbxref=NCBI_GP:UTX04490.1;Name=UTX04490.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389024.1;locus_tag=NM058_15740;product=tryptophan--tRNA ligase;protein_id=UTX04490.1;transl_table=11 CP101611.1 Genbank gene 3009614 3010366 . - . ID=gene-NM058_15745;Name=NM058_15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15745 CP101611.1 Protein Homology CDS 3009614 3010366 . - 0 ID=cds-UTX04491.1;Parent=gene-NM058_15745;Dbxref=NCBI_GP:UTX04491.1;Name=UTX04491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389023.1;locus_tag=NM058_15745;product=YjbA family protein;protein_id=UTX04491.1;transl_table=11 CP101611.1 Genbank gene 3010570 3011484 . - . ID=gene-NM058_15750;Name=NM058_15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15750 CP101611.1 Protein Homology CDS 3010570 3011484 . - 0 ID=cds-UTX04492.1;Parent=gene-NM058_15750;Dbxref=NCBI_GP:UTX04492.1;Name=UTX04492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003155049.1;locus_tag=NM058_15750;product=ABC transporter permease;protein_id=UTX04492.1;transl_table=11 CP101611.1 Genbank gene 3011500 3012450 . - . ID=gene-NM058_15755;Name=NM058_15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15755 CP101611.1 Protein Homology CDS 3011500 3012450 . - 0 ID=cds-UTX04493.1;Parent=gene-NM058_15755;Dbxref=NCBI_GP:UTX04493.1;Name=UTX04493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389021.2;locus_tag=NM058_15755;product=ABC transporter permease;protein_id=UTX04493.1;transl_table=11 CP101611.1 Genbank gene 3012524 3014152 . - . ID=gene-NM058_15760;Name=NM058_15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15760 CP101611.1 Protein Homology CDS 3012524 3014152 . - 0 ID=cds-UTX04494.1;Parent=gene-NM058_15760;Dbxref=NCBI_GP:UTX04494.1;Name=UTX04494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015252363.1;locus_tag=NM058_15760;product=peptide-binding protein;protein_id=UTX04494.1;transl_table=11 CP101611.1 Genbank pseudogene 3014238 3015226 . - . ID=gene-NM058_15765;Name=appF;gbkey=Gene;gene=appF;gene_biotype=pseudogene;locus_tag=NM058_15765;pseudo=true CP101611.1 Protein Homology CDS 3014238 3015226 . - 0 ID=cds-NM058_15765;Parent=gene-NM058_15765;Note=frameshifted;gbkey=CDS;gene=appF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389019.2;locus_tag=NM058_15765;product=oligopeptide ABC transporter ATP-binding protein AppF;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3015223 3016208 . - . ID=gene-NM058_15770;Name=appD;gbkey=Gene;gene=appD;gene_biotype=pseudogene;locus_tag=NM058_15770;pseudo=true CP101611.1 Protein Homology CDS 3015223 3016208 . - 0 ID=cds-NM058_15770;Parent=gene-NM058_15770;Note=frameshifted;gbkey=CDS;gene=appD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389018.1;locus_tag=NM058_15770;product=oligopeptide ABC transporter ATP-binding protein AppD;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3016397 3017181 . - . ID=gene-NM058_15775;Name=NM058_15775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15775;pseudo=true CP101611.1 Protein Homology CDS 3016397 3017181 . - 0 ID=cds-NM058_15775;Parent=gene-NM058_15775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389017.1;locus_tag=NM058_15775;product=DUF2268 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3017257 3018498 . - . ID=gene-NM058_15780;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=NM058_15780 CP101611.1 Protein Homology CDS 3017257 3018498 . - 0 ID=cds-UTX04495.1;Parent=gene-NM058_15780;Dbxref=NCBI_GP:UTX04495.1;Name=UTX04495.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389016.1;locus_tag=NM058_15780;product=beta-ketoacyl-ACP synthase II;protein_id=UTX04495.1;transl_table=11 CP101611.1 Genbank gene 3018521 3019459 . - . ID=gene-NM058_15785;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=NM058_15785 CP101611.1 Protein Homology CDS 3018521 3019459 . - 0 ID=cds-UTX04496.1;Parent=gene-NM058_15785;Dbxref=NCBI_GP:UTX04496.1;Name=UTX04496.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389015.1;locus_tag=NM058_15785;product=beta-ketoacyl-ACP synthase III;protein_id=UTX04496.1;transl_table=11 CP101611.1 Genbank gene 3019623 3019850 . + . ID=gene-NM058_15790;Name=NM058_15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15790 CP101611.1 Protein Homology CDS 3019623 3019850 . + 0 ID=cds-UTX04497.1;Parent=gene-NM058_15790;Dbxref=NCBI_GP:UTX04497.1;Name=UTX04497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389014.1;locus_tag=NM058_15790;product=hypothetical protein;protein_id=UTX04497.1;transl_table=11 CP101611.1 Genbank gene 3019880 3020071 . - . ID=gene-NM058_15795;Name=comZ;gbkey=Gene;gene=comZ;gene_biotype=protein_coding;locus_tag=NM058_15795 CP101611.1 Protein Homology CDS 3019880 3020071 . - 0 ID=cds-UTX04498.1;Parent=gene-NM058_15795;Dbxref=NCBI_GP:UTX04498.1;Name=UTX04498.1;gbkey=CDS;gene=comZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389013.1;locus_tag=NM058_15795;product=ComG operon transcriptional repressor ComZ;protein_id=UTX04498.1;transl_table=11 CP101611.1 Genbank gene 3020086 3021039 . - . ID=gene-NM058_15800;Name=med;gbkey=Gene;gene=med;gene_biotype=protein_coding;locus_tag=NM058_15800 CP101611.1 Protein Homology CDS 3020086 3021039 . - 0 ID=cds-UTX04499.1;Parent=gene-NM058_15800;Dbxref=NCBI_GP:UTX04499.1;Name=UTX04499.1;gbkey=CDS;gene=med;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389012.2;locus_tag=NM058_15800;product=transcriptional regulator Med;protein_id=UTX04499.1;transl_table=11 CP101611.1 Genbank gene 3021130 3021687 . - . ID=gene-NM058_15805;Name=NM058_15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15805 CP101611.1 Protein Homology CDS 3021130 3021687 . - 0 ID=cds-UTX04500.1;Parent=gene-NM058_15805;Dbxref=NCBI_GP:UTX04500.1;Name=UTX04500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389011.2;locus_tag=NM058_15805;product=hypothetical protein;protein_id=UTX04500.1;transl_table=11 CP101611.1 Genbank gene 3021769 3022503 . - . ID=gene-NM058_15810;Name=NM058_15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15810 CP101611.1 Protein Homology CDS 3021769 3022503 . - 0 ID=cds-UTX04501.1;Parent=gene-NM058_15810;Dbxref=NCBI_GP:UTX04501.1;Name=UTX04501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389010.1;locus_tag=NM058_15810;product=hypothetical protein;protein_id=UTX04501.1;transl_table=11 CP101611.1 Genbank gene 3022755 3022940 . + . ID=gene-NM058_15815;Name=NM058_15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15815 CP101611.1 Protein Homology CDS 3022755 3022940 . + 0 ID=cds-UTX04502.1;Parent=gene-NM058_15815;Dbxref=NCBI_GP:UTX04502.1;Name=UTX04502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389009.1;locus_tag=NM058_15815;product=YjzD family protein;protein_id=UTX04502.1;transl_table=11 CP101611.1 Genbank gene 3022986 3023165 . - . ID=gene-NM058_15820;Name=NM058_15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15820 CP101611.1 Protein Homology CDS 3022986 3023165 . - 0 ID=cds-UTX07068.1;Parent=gene-NM058_15820;Dbxref=NCBI_GP:UTX07068.1;Name=UTX07068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389008.1;locus_tag=NM058_15820;product=YjzC family protein;protein_id=UTX07068.1;transl_table=11 CP101611.1 Genbank gene 3023267 3024211 . - . ID=gene-NM058_15825;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=NM058_15825 CP101611.1 Protein Homology CDS 3023267 3024211 . - 0 ID=cds-UTX04503.1;Parent=gene-NM058_15825;Dbxref=NCBI_GP:UTX04503.1;Name=UTX04503.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003224547.1;locus_tag=NM058_15825;product=ornithine carbamoyltransferase;protein_id=UTX04503.1;transl_table=11 CP101611.1 Genbank pseudogene 3024199 3027289 . - . ID=gene-NM058_15830;Name=NM058_15830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15830;pseudo=true CP101611.1 Protein Homology CDS 3024199 3027289 . - 0 ID=cds-NM058_15830;Parent=gene-NM058_15830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389006.3;locus_tag=NM058_15830;product=carbamoyl phosphate synthase large subunit;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3027282 3028343 . - . ID=gene-NM058_15835;Name=NM058_15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15835 CP101611.1 Protein Homology CDS 3027282 3028343 . - 0 ID=cds-UTX04504.1;Parent=gene-NM058_15835;Dbxref=NCBI_GP:UTX04504.1;Name=UTX04504.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389005.2;locus_tag=NM058_15835;product=carbamoyl phosphate synthase small subunit;protein_id=UTX04504.1;transl_table=11 CP101611.1 Genbank pseudogene 3028414 3029534 . - . ID=gene-NM058_15840;Name=NM058_15840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15840;pseudo=true CP101611.1 Protein Homology CDS 3028414 3029534 . - 0 ID=cds-NM058_15840;Parent=gene-NM058_15840;Note=frameshifted;Ontology_term=GO:0006525,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389004.2;locus_tag=NM058_15840;product=acetylornithine transaminase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3029567 3030343 . - . ID=gene-NM058_15845;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=NM058_15845 CP101611.1 Protein Homology CDS 3029567 3030343 . - 0 ID=cds-UTX04505.1;Parent=gene-NM058_15845;Dbxref=NCBI_GP:UTX04505.1;Name=UTX04505.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389003.1;locus_tag=NM058_15845;product=acetylglutamate kinase;protein_id=UTX04505.1;transl_table=11 CP101611.1 Genbank gene 3030358 3031578 . - . ID=gene-NM058_15850;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=NM058_15850 CP101611.1 Protein Homology CDS 3030358 3031578 . - 0 ID=cds-UTX04506.1;Parent=gene-NM058_15850;Dbxref=NCBI_GP:UTX04506.1;Name=UTX04506.1;Ontology_term=GO:0006592,GO:0004042,GO:0004358;gbkey=CDS;gene=argJ;go_function=acetyl-CoA:L-glutamate N-acetyltransferase activity|0004042||IEA,glutamate N-acetyltransferase activity|0004358||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389002.2;locus_tag=NM058_15850;product=bifunctional ornithine acetyltransferase/N-acetylglutamate synthase;protein_id=UTX04506.1;transl_table=11 CP101611.1 Genbank gene 3031598 3032638 . - . ID=gene-NM058_15855;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=NM058_15855 CP101611.1 Protein Homology CDS 3031598 3032638 . - 0 ID=cds-UTX04507.1;Parent=gene-NM058_15855;Dbxref=NCBI_GP:UTX04507.1;Name=UTX04507.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389001.2;locus_tag=NM058_15855;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=UTX04507.1;transl_table=11 CP101611.1 Genbank gene 3032842 3033336 . - . ID=gene-NM058_15860;Name=NM058_15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15860 CP101611.1 Protein Homology CDS 3032842 3033336 . - 0 ID=cds-UTX07069.1;Parent=gene-NM058_15860;Dbxref=NCBI_GP:UTX07069.1;Name=UTX07069.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_389000.1;locus_tag=NM058_15860;product=MFS transporter;protein_id=UTX07069.1;transl_table=11 CP101611.1 Genbank gene 3033381 3034811 . - . ID=gene-NM058_15865;Name=NM058_15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15865 CP101611.1 Protein Homology CDS 3033381 3034811 . - 0 ID=cds-UTX04508.1;Parent=gene-NM058_15865;Dbxref=NCBI_GP:UTX04508.1;Name=UTX04508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388999.3;locus_tag=NM058_15865;product=FAD-binding oxidoreductase;protein_id=UTX04508.1;transl_table=11 CP101611.1 Genbank gene 3034873 3035043 . - . ID=gene-NM058_15870;Name=NM058_15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15870 CP101611.1 Protein Homology CDS 3034873 3035043 . - 0 ID=cds-UTX04509.1;Parent=gene-NM058_15870;Dbxref=NCBI_GP:UTX04509.1;Name=UTX04509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990226.1;locus_tag=NM058_15870;product=YqaE/Pmp3 family membrane protein;protein_id=UTX04509.1;transl_table=11 CP101611.1 Genbank pseudogene 3035112 3035421 . - . ID=gene-NM058_15875;Name=NM058_15875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15875;pseudo=true CP101611.1 Protein Homology CDS 3035112 3035421 . - 0 ID=cds-NM058_15875;Parent=gene-NM058_15875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388997.1;locus_tag=NM058_15875;product=metal-sulfur cluster assembly factor;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3035485 3036252 . - . ID=gene-NM058_15880;Name=NM058_15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15880 CP101611.1 Protein Homology CDS 3035485 3036252 . - 0 ID=cds-UTX04510.1;Parent=gene-NM058_15880;Dbxref=NCBI_GP:UTX04510.1;Name=UTX04510.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388996.1;locus_tag=NM058_15880;product=prolyl oligopeptidase family serine peptidase;protein_id=UTX04510.1;transl_table=11 CP101611.1 Genbank gene 3036373 3037185 . + . ID=gene-NM058_15885;Name=yitU;gbkey=Gene;gene=yitU;gene_biotype=protein_coding;gene_synonym=ribZC;locus_tag=NM058_15885 CP101611.1 Protein Homology CDS 3036373 3037185 . + 0 ID=cds-UTX04511.1;Parent=gene-NM058_15885;Dbxref=NCBI_GP:UTX04511.1;Name=UTX04511.1;Ontology_term=GO:0043726;gbkey=CDS;gene=yitU;go_function=5-amino-6-(5-phosphoribitylamino)uracil phosphatase activity|0043726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388995.1;locus_tag=NM058_15885;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YitU;protein_id=UTX04511.1;transl_table=11 CP101611.1 Genbank gene 3037290 3037442 . + . ID=gene-NM058_15890;Name=NM058_15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15890 CP101611.1 Protein Homology CDS 3037290 3037442 . + 0 ID=cds-UTX04512.1;Parent=gene-NM058_15890;Dbxref=NCBI_GP:UTX04512.1;Name=UTX04512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003245103.1;locus_tag=NM058_15890;product=hypothetical protein;protein_id=UTX04512.1;transl_table=11 CP101611.1 Genbank gene 3037443 3037640 . + . ID=gene-NM058_15895;Name=NM058_15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15895 CP101611.1 Protein Homology CDS 3037443 3037640 . + 0 ID=cds-UTX04513.1;Parent=gene-NM058_15895;Dbxref=NCBI_GP:UTX04513.1;Name=UTX04513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097702.1;locus_tag=NM058_15895;product=DUF3813 domain-containing protein;protein_id=UTX04513.1;transl_table=11 CP101611.1 Genbank gene 3037671 3038030 . - . ID=gene-NM058_15900;Name=NM058_15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15900 CP101611.1 Protein Homology CDS 3037671 3038030 . - 0 ID=cds-UTX07070.1;Parent=gene-NM058_15900;Dbxref=NCBI_GP:UTX07070.1;Name=UTX07070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010886475.1;locus_tag=NM058_15900;product=intracellular proteinase inhibitor;protein_id=UTX07070.1;transl_table=11 CP101611.1 Genbank gene 3038144 3038986 . - . ID=gene-NM058_15905;Name=NM058_15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15905 CP101611.1 Protein Homology CDS 3038144 3038986 . - 0 ID=cds-UTX04514.1;Parent=gene-NM058_15905;Dbxref=NCBI_GP:UTX04514.1;Name=UTX04514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388993.1;locus_tag=NM058_15905;product=YitT family protein;protein_id=UTX04514.1;transl_table=11 CP101611.1 Genbank pseudogene 3039124 3039974 . + . ID=gene-NM058_15910;Name=NM058_15910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15910;pseudo=true CP101611.1 Protein Homology CDS 3039124 3039974 . + 0 ID=cds-NM058_15910;Parent=gene-NM058_15910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388992.1;locus_tag=NM058_15910;product=DegV family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3040022 3041638 . - . ID=gene-NM058_15915;Name=NM058_15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15915 CP101611.1 Protein Homology CDS 3040022 3041638 . - 0 ID=cds-UTX04515.1;Parent=gene-NM058_15915;Dbxref=NCBI_GP:UTX04515.1;Name=UTX04515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019258034.1;locus_tag=NM058_15915;product=M4 family metallopeptidase;protein_id=UTX04515.1;transl_table=11 CP101611.1 Genbank gene 3041775 3042068 . - . ID=gene-NM058_15920;Name=NM058_15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15920 CP101611.1 Protein Homology CDS 3041775 3042068 . - 0 ID=cds-UTX04516.1;Parent=gene-NM058_15920;Dbxref=NCBI_GP:UTX04516.1;Name=UTX04516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388990.1;locus_tag=NM058_15920;product=DUF3784 domain-containing protein;protein_id=UTX04516.1;transl_table=11 CP101611.1 Genbank pseudogene 3042088 3042673 . - . ID=gene-NM058_15925;Name=NM058_15925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15925;pseudo=true CP101611.1 Protein Homology CDS 3042088 3042673 . - 0 ID=cds-NM058_15925;Parent=gene-NM058_15925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388989.2;locus_tag=NM058_15925;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3042670 3043017 . - . ID=gene-NM058_15930;Name=NM058_15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15930 CP101611.1 Protein Homology CDS 3042670 3043017 . - 0 ID=cds-UTX04517.1;Parent=gene-NM058_15930;Dbxref=NCBI_GP:UTX04517.1;Name=UTX04517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097701.1;locus_tag=NM058_15930;product=PadR family transcriptional regulator;protein_id=UTX04517.1;transl_table=11 CP101611.1 Genbank gene 3043195 3043731 . + . ID=gene-NM058_15935;Name=NM058_15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15935 CP101611.1 Protein Homology CDS 3043195 3043731 . + 0 ID=cds-UTX04518.1;Parent=gene-NM058_15935;Dbxref=NCBI_GP:UTX04518.1;Name=UTX04518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388988.1;locus_tag=NM058_15935;product=SdpA family antimicrobial peptide system protein;protein_id=UTX04518.1;transl_table=11 CP101611.1 Genbank gene 3043716 3044642 . + . ID=gene-NM058_15940;Name=NM058_15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15940 CP101611.1 Protein Homology CDS 3043716 3044642 . + 0 ID=cds-UTX04519.1;Parent=gene-NM058_15940;Dbxref=NCBI_GP:UTX04519.1;Name=UTX04519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388987.2;locus_tag=NM058_15940;product=hypothetical protein;protein_id=UTX04519.1;transl_table=11 CP101611.1 Genbank gene 3044639 3045223 . + . ID=gene-NM058_15945;Name=NM058_15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15945 CP101611.1 Protein Homology CDS 3044639 3045223 . + 0 ID=cds-UTX04520.1;Parent=gene-NM058_15945;Dbxref=NCBI_GP:UTX04520.1;Name=UTX04520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388985.1;locus_tag=NM058_15945;product=sporulation delaying protein family toxin;protein_id=UTX04520.1;transl_table=11 CP101611.1 Genbank pseudogene 3045269 3046166 . - . ID=gene-NM058_15950;Name=NM058_15950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15950;pseudo=true CP101611.1 Protein Homology CDS 3045269 3046166 . - 0 ID=cds-NM058_15950;Parent=gene-NM058_15950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388984.1;locus_tag=NM058_15950;product=S1 RNA-binding domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3046265 3046756 . + . ID=gene-NM058_15955;Name=NM058_15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15955 CP101611.1 Protein Homology CDS 3046265 3046756 . + 0 ID=cds-UTX04521.1;Parent=gene-NM058_15955;Dbxref=NCBI_GP:UTX04521.1;Name=UTX04521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388983.1;locus_tag=NM058_15955;product=YajQ family cyclic di-GMP-binding protein;protein_id=UTX04521.1;transl_table=11 CP101611.1 cmsearch riboswitch 3046863 3046981 . + . ID=id-CP101611.1:3046863..3046981;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank pseudogene 3047072 3048904 . + . ID=gene-NM058_15960;Name=NM058_15960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15960;pseudo=true CP101611.1 Protein Homology CDS 3047072 3048904 . + 0 ID=cds-NM058_15960;Parent=gene-NM058_15960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388982.1;locus_tag=NM058_15960;product=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3048994 3049443 . + . ID=gene-NM058_15965;Name=NM058_15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15965 CP101611.1 Protein Homology CDS 3048994 3049443 . + 0 ID=cds-UTX04522.1;Parent=gene-NM058_15965;Dbxref=NCBI_GP:UTX04522.1;Name=UTX04522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388981.2;locus_tag=NM058_15965;product=GNAT family N-acetyltransferase;protein_id=UTX04522.1;transl_table=11 CP101611.1 Genbank pseudogene 3049448 3050298 . + . ID=gene-NM058_15970;Name=NM058_15970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15970;pseudo=true CP101611.1 Protein Homology CDS 3049448 3050298 . + 0 ID=cds-NM058_15970;Parent=gene-NM058_15970;Note=frameshifted;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388980.1;locus_tag=NM058_15970;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3050410 3051677 . + . ID=gene-NM058_15975;Name=NM058_15975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15975;pseudo=true CP101611.1 Protein Homology CDS 3050410 3051677 . + 0 ID=cds-NM058_15975;Parent=gene-NM058_15975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388979.1;locus_tag=NM058_15975;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3051686 3052801 . + . ID=gene-NM058_15980;Name=NM058_15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15980 CP101611.1 Protein Homology CDS 3051686 3052801 . + 0 ID=cds-UTX04523.1;Parent=gene-NM058_15980;Dbxref=NCBI_GP:UTX04523.1;Name=UTX04523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388978.1;locus_tag=NM058_15980;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=UTX04523.1;transl_table=11 CP101611.1 Genbank pseudogene 3052896 3053524 . + . ID=gene-NM058_15985;Name=NM058_15985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15985;pseudo=true CP101611.1 Protein Homology CDS 3052896 3053524 . + 0 ID=cds-NM058_15985;Parent=gene-NM058_15985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388977.1;locus_tag=NM058_15985;product=YitT family protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3053569 3054326 . - . ID=gene-NM058_15990;Name=NM058_15990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_15990;pseudo=true CP101611.1 Protein Homology CDS 3053569 3054326 . - 0 ID=cds-NM058_15990;Parent=gene-NM058_15990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388976.1;locus_tag=NM058_15990;product=phosphosulfolactate synthase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3054323 3055009 . - . ID=gene-NM058_15995;Name=NM058_15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_15995 CP101611.1 Protein Homology CDS 3054323 3055009 . - 0 ID=cds-UTX04524.1;Parent=gene-NM058_15995;Dbxref=NCBI_GP:UTX04524.1;Name=UTX04524.1;Ontology_term=GO:0000287,GO:0050532;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,2-phosphosulfolactate phosphatase activity|0050532||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388975.1;locus_tag=NM058_15995;product=2-phosphosulfolactate phosphatase;protein_id=UTX04524.1;transl_table=11 CP101611.1 Genbank gene 3055198 3055911 . + . ID=gene-NM058_16000;Name=NM058_16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16000 CP101611.1 Protein Homology CDS 3055198 3055911 . + 0 ID=cds-UTX04525.1;Parent=gene-NM058_16000;Dbxref=NCBI_GP:UTX04525.1;Name=UTX04525.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388974.2;locus_tag=NM058_16000;product=phosphoadenylyl-sulfate reductase;protein_id=UTX04525.1;transl_table=11 CP101611.1 Genbank gene 3056017 3057186 . + . ID=gene-NM058_16005;Name=sat;gbkey=Gene;gene=sat;gene_biotype=protein_coding;locus_tag=NM058_16005 CP101611.1 Protein Homology CDS 3056017 3057186 . + 0 ID=cds-UTX04526.1;Parent=gene-NM058_16005;Dbxref=NCBI_GP:UTX04526.1;Name=UTX04526.1;Ontology_term=GO:0004781;gbkey=CDS;gene=sat;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388973.2;locus_tag=NM058_16005;product=sulfate adenylyltransferase;protein_id=UTX04526.1;transl_table=11 CP101611.1 Genbank gene 3057183 3057782 . + . ID=gene-NM058_16010;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=NM058_16010 CP101611.1 Protein Homology CDS 3057183 3057782 . + 0 ID=cds-UTX04527.1;Parent=gene-NM058_16010;Dbxref=NCBI_GP:UTX04527.1;Name=UTX04527.1;Ontology_term=GO:0006790,GO:0004020;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388972.1;locus_tag=NM058_16010;product=adenylyl-sulfate kinase;protein_id=UTX04527.1;transl_table=11 CP101611.1 Genbank gene 3057811 3058617 . - . ID=gene-NM058_16015;Name=NM058_16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16015 CP101611.1 Protein Homology CDS 3057811 3058617 . - 0 ID=cds-UTX04528.1;Parent=gene-NM058_16015;Dbxref=NCBI_GP:UTX04528.1;Name=UTX04528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388971.1;locus_tag=NM058_16015;product=alpha/beta hydrolase;protein_id=UTX04528.1;transl_table=11 CP101611.1 Genbank gene 3058822 3059460 . + . ID=gene-NM058_16020;Name=NM058_16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16020 CP101611.1 Protein Homology CDS 3058822 3059460 . + 0 ID=cds-UTX04529.1;Parent=gene-NM058_16020;Dbxref=NCBI_GP:UTX04529.1;Name=UTX04529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388970.1;locus_tag=NM058_16020;product=pentapeptide repeat-containing protein;protein_id=UTX04529.1;transl_table=11 CP101611.1 Genbank pseudogene 3059468 3060918 . - . ID=gene-NM058_16025;Name=NM058_16025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16025;pseudo=true CP101611.1 Protein Homology CDS 3059468 3060918 . - 0 ID=cds-NM058_16025;Parent=gene-NM058_16025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388968.2;locus_tag=NM058_16025;product=PLP-dependent aminotransferase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3061035 3061646 . + . ID=gene-NM058_16030;Name=NM058_16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16030 CP101611.1 Protein Homology CDS 3061035 3061646 . + 0 ID=cds-UTX04530.1;Parent=gene-NM058_16030;Dbxref=NCBI_GP:UTX04530.1;Name=UTX04530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003245667.1;locus_tag=NM058_16030;product=LysE/ArgO family amino acid transporter;protein_id=UTX04530.1;transl_table=11 CP101611.1 Genbank gene 3061696 3062205 . + . ID=gene-NM058_16035;Name=NM058_16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16035 CP101611.1 Protein Homology CDS 3061696 3062205 . + 0 ID=cds-UTX04531.1;Parent=gene-NM058_16035;Dbxref=NCBI_GP:UTX04531.1;Name=UTX04531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388966.2;locus_tag=NM058_16035;product=DinB family protein;protein_id=UTX04531.1;transl_table=11 CP101611.1 Genbank gene 3062247 3063275 . - . ID=gene-NM058_16040;Name=iolX;gbkey=Gene;gene=iolX;gene_biotype=protein_coding;gene_synonym=yisS;locus_tag=NM058_16040 CP101611.1 Protein Homology CDS 3062247 3063275 . - 0 ID=cds-UTX04532.1;Parent=gene-NM058_16040;Dbxref=NCBI_GP:UTX04532.1;Name=UTX04532.1;gbkey=CDS;gene=iolX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388965.1;locus_tag=NM058_16040;product=scyllo-inositol 2-dehydrogenase;protein_id=UTX04532.1;transl_table=11 CP101611.1 Genbank pseudogene 3063488 3064500 . - . ID=gene-NM058_16045;Name=degA;gbkey=Gene;gene=degA;gene_biotype=pseudogene;gene_synonym=iolQ;locus_tag=NM058_16045;pseudo=true CP101611.1 Protein Homology CDS 3063488 3064500 . - 0 ID=cds-NM058_16045;Parent=gene-NM058_16045;Note=frameshifted;gbkey=CDS;gene=degA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388964.1;locus_tag=NM058_16045;product=transcriptional regulator DegA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3064518 3065381 . - . ID=gene-NM058_16050;Name=NM058_16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16050 CP101611.1 Protein Homology CDS 3064518 3065381 . - 0 ID=cds-UTX04533.1;Parent=gene-NM058_16050;Dbxref=NCBI_GP:UTX04533.1;Name=UTX04533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388963.1;locus_tag=NM058_16050;product=AraC family transcriptional regulator;protein_id=UTX04533.1;transl_table=11 CP101611.1 Genbank pseudogene 3065505 3066871 . + . ID=gene-NM058_16055;Name=NM058_16055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16055;pseudo=true CP101611.1 Protein Homology CDS 3065505 3066871 . + 0 ID=cds-NM058_16055;Parent=gene-NM058_16055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388962.1;locus_tag=NM058_16055;product=MATE family efflux transporter;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3066901 3067730 . - . ID=gene-NM058_16060;Name=NM058_16060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16060;pseudo=true CP101611.1 Protein Homology CDS 3066901 3067730 . - 0 ID=cds-NM058_16060;Parent=gene-NM058_16060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388961.1;locus_tag=NM058_16060;product=phytoene/squalene synthase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3067812 3069655 . - . ID=gene-NM058_16065;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=pseudogene;locus_tag=NM058_16065;pseudo=true CP101611.1 Protein Homology CDS 3067812 3069655 . - 0 ID=cds-NM058_16065;Parent=gene-NM058_16065;Note=frameshifted;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010329316.1;locus_tag=NM058_16065;product=asparagine synthase (glutamine-hydrolyzing);pseudo=true;transl_table=11 CP101611.1 Genbank gene 3069825 3070382 . + . ID=gene-NM058_16070;Name=NM058_16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16070 CP101611.1 Protein Homology CDS 3069825 3070382 . + 0 ID=cds-UTX04534.1;Parent=gene-NM058_16070;Dbxref=NCBI_GP:UTX04534.1;Name=UTX04534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015483063.1;locus_tag=NM058_16070;product=DUF2777 domain-containing protein;protein_id=UTX04534.1;transl_table=11 CP101611.1 Genbank gene 3070415 3073093 . - . ID=gene-NM058_16075;Name=wprA;gbkey=Gene;gene=wprA;gene_biotype=protein_coding;locus_tag=NM058_16075 CP101611.1 Protein Homology CDS 3070415 3073093 . - 0 ID=cds-UTX04535.1;Parent=gene-NM058_16075;Dbxref=NCBI_GP:UTX04535.1;Name=UTX04535.1;gbkey=CDS;gene=wprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388958.1;locus_tag=NM058_16075;product=cell wall-associated protease WprA;protein_id=UTX04535.1;transl_table=11 CP101611.1 Genbank gene 3073259 3073615 . - . ID=gene-NM058_16080;Name=NM058_16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16080 CP101611.1 Protein Homology CDS 3073259 3073615 . - 0 ID=cds-UTX04536.1;Parent=gene-NM058_16080;Dbxref=NCBI_GP:UTX04536.1;Name=UTX04536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388957.1;locus_tag=NM058_16080;product=YisL family protein;protein_id=UTX04536.1;transl_table=11 CP101611.1 Genbank gene 3073730 3074635 . - . ID=gene-NM058_16085;Name=NM058_16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16085 CP101611.1 Protein Homology CDS 3073730 3074635 . - 0 ID=cds-UTX04537.1;Parent=gene-NM058_16085;Dbxref=NCBI_GP:UTX04537.1;Name=UTX04537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388956.1;locus_tag=NM058_16085;product=fumarylacetoacetate hydrolase family protein;protein_id=UTX04537.1;transl_table=11 CP101611.1 Genbank gene 3074790 3075713 . + . ID=gene-NM058_16090;Name=NM058_16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16090 CP101611.1 Protein Homology CDS 3074790 3075713 . + 0 ID=cds-UTX04538.1;Parent=gene-NM058_16090;Dbxref=NCBI_GP:UTX04538.1;Name=UTX04538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388955.1;locus_tag=NM058_16090;product=CotH kinase family protein;protein_id=UTX04538.1;transl_table=11 CP101611.1 Genbank gene 3075856 3076026 . + . ID=gene-NM058_16095;Name=NM058_16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16095 CP101611.1 Protein Homology CDS 3075856 3076026 . + 0 ID=cds-UTX04539.1;Parent=gene-NM058_16095;Dbxref=NCBI_GP:UTX04539.1;Name=UTX04539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388954.1;locus_tag=NM058_16095;product=aspartyl-phosphate phosphatase Spo0E family protein;protein_id=UTX04539.1;transl_table=11 CP101611.1 Genbank gene 3076449 3076670 . + . ID=gene-NM058_16100;Name=NM058_16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16100 CP101611.1 Protein Homology CDS 3076449 3076670 . + 0 ID=cds-UTX04540.1;Parent=gene-NM058_16100;Dbxref=NCBI_GP:UTX04540.1;Name=UTX04540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388953.1;locus_tag=NM058_16100;product=spore germination protein;protein_id=UTX04540.1;transl_table=11 CP101611.1 Genbank gene 3076684 3076917 . + . ID=gene-NM058_16105;Name=NM058_16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16105 CP101611.1 Protein Homology CDS 3076684 3076917 . + 0 ID=cds-UTX04541.1;Parent=gene-NM058_16105;Dbxref=NCBI_GP:UTX04541.1;Name=UTX04541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388952.2;locus_tag=NM058_16105;product=spore germination protein GerPB;protein_id=UTX04541.1;transl_table=11 CP101611.1 Genbank gene 3076941 3077558 . + . ID=gene-NM058_16110;Name=NM058_16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16110 CP101611.1 Protein Homology CDS 3076941 3077558 . + 0 ID=cds-UTX04542.1;Parent=gene-NM058_16110;Dbxref=NCBI_GP:UTX04542.1;Name=UTX04542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388951.1;locus_tag=NM058_16110;product=spore germination protein GerPC;protein_id=UTX04542.1;transl_table=11 CP101611.1 Genbank gene 3077555 3077737 . + . ID=gene-NM058_16115;Name=gerPD;gbkey=Gene;gene=gerPD;gene_biotype=protein_coding;locus_tag=NM058_16115 CP101611.1 Protein Homology CDS 3077555 3077737 . + 0 ID=cds-UTX04543.1;Parent=gene-NM058_16115;Dbxref=NCBI_GP:UTX04543.1;Name=UTX04543.1;gbkey=CDS;gene=gerPD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010333669.1;locus_tag=NM058_16115;product=spore germination protein GerPD;protein_id=UTX04543.1;transl_table=11 CP101611.1 Genbank gene 3077730 3078131 . + . ID=gene-NM058_16120;Name=NM058_16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16120 CP101611.1 Protein Homology CDS 3077730 3078131 . + 0 ID=cds-UTX04544.1;Parent=gene-NM058_16120;Dbxref=NCBI_GP:UTX04544.1;Name=UTX04544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388949.1;locus_tag=NM058_16120;product=spore germination protein GerPE;protein_id=UTX04544.1;transl_table=11 CP101611.1 Genbank gene 3078163 3078381 . + . ID=gene-NM058_16125;Name=NM058_16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16125 CP101611.1 Protein Homology CDS 3078163 3078381 . + 0 ID=cds-UTX04545.1;Parent=gene-NM058_16125;Dbxref=NCBI_GP:UTX04545.1;Name=UTX04545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388948.2;locus_tag=NM058_16125;product=spore germination protein;protein_id=UTX04545.1;transl_table=11 CP101611.1 Genbank gene 3078416 3078718 . - . ID=gene-NM058_16130;Name=hlpB;gbkey=Gene;gene=hlpB;gene_biotype=protein_coding;locus_tag=NM058_16130 CP101611.1 Protein Homology CDS 3078416 3078718 . - 0 ID=cds-UTX04546.1;Parent=gene-NM058_16130;Dbxref=NCBI_GP:UTX04546.1;Name=UTX04546.1;gbkey=CDS;gene=hlpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388947.1;locus_tag=NM058_16130;product=HNH nuclease-like protein HlpB;protein_id=UTX04546.1;transl_table=11 CP101611.1 Genbank gene 3078732 3082124 . - . ID=gene-NM058_16135;Name=NM058_16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16135 CP101611.1 Protein Homology CDS 3078732 3082124 . - 0 ID=cds-UTX04547.1;Parent=gene-NM058_16135;Dbxref=NCBI_GP:UTX04547.1;Name=UTX04547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388946.2;locus_tag=NM058_16135;product=SMC family ATPase;protein_id=UTX04547.1;transl_table=11 CP101611.1 Genbank pseudogene 3082121 3083295 . - . ID=gene-NM058_16140;Name=NM058_16140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16140;pseudo=true CP101611.1 Protein Homology CDS 3082121 3083295 . - 0 ID=cds-NM058_16140;Parent=gene-NM058_16140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388945.3;locus_tag=NM058_16140;product=exonuclease SbcCD subunit D;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3083367 3087070 . - . ID=gene-NM058_16145;Name=addA;gbkey=Gene;gene=addA;gene_biotype=pseudogene;locus_tag=NM058_16145;pseudo=true CP101611.1 Protein Homology CDS 3083367 3087070 . - 0 ID=cds-NM058_16145;Parent=gene-NM058_16145;Note=frameshifted;Ontology_term=GO:0000724,GO:0003678,GO:0016818;gbkey=CDS;gene=addA;go_function=DNA helicase activity|0003678||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388944.2;locus_tag=NM058_16145;product=helicase-exonuclease AddAB subunit AddA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3087057 3090557 . - . ID=gene-NM058_16150;Name=addB;gbkey=Gene;gene=addB;gene_biotype=protein_coding;locus_tag=NM058_16150 CP101611.1 Protein Homology CDS 3087057 3090557 . - 0 ID=cds-UTX04548.1;Parent=gene-NM058_16150;Dbxref=NCBI_GP:UTX04548.1;Name=UTX04548.1;Ontology_term=GO:0000724,GO:0003678;gbkey=CDS;gene=addB;go_function=DNA helicase activity|0003678||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388943.2;locus_tag=NM058_16150;product=helicase-exonuclease AddAB subunit AddB;protein_id=UTX04548.1;transl_table=11 CP101611.1 Genbank gene 3090740 3091177 . + . ID=gene-NM058_16155;Name=NM058_16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16155 CP101611.1 Protein Homology CDS 3090740 3091177 . + 0 ID=cds-UTX04549.1;Parent=gene-NM058_16155;Dbxref=NCBI_GP:UTX04549.1;Name=UTX04549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388942.1;locus_tag=NM058_16155;product=rubrerythrin family protein;protein_id=UTX04549.1;transl_table=11 CP101611.1 Genbank gene 3091294 3091623 . + . ID=gene-NM058_16160;Name=NM058_16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16160 CP101611.1 Protein Homology CDS 3091294 3091623 . + 0 ID=cds-UTX04550.1;Parent=gene-NM058_16160;Dbxref=NCBI_GP:UTX04550.1;Name=UTX04550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257992.1;locus_tag=NM058_16160;product=four-helix bundle copper-binding protein;protein_id=UTX04550.1;transl_table=11 CP101611.1 Genbank gene 3091659 3093386 . - . ID=gene-NM058_16165;Name=NM058_16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16165 CP101611.1 Protein Homology CDS 3091659 3093386 . - 0 ID=cds-UTX04551.1;Parent=gene-NM058_16165;Dbxref=NCBI_GP:UTX04551.1;Name=UTX04551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388940.1;locus_tag=NM058_16165;product=ABC transporter substrate-binding protein;protein_id=UTX04551.1;transl_table=11 CP101611.1 Genbank gene 3093500 3094702 . + . ID=gene-NM058_16170;Name=NM058_16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16170 CP101611.1 Protein Homology CDS 3093500 3094702 . + 0 ID=cds-UTX04552.1;Parent=gene-NM058_16170;Dbxref=NCBI_GP:UTX04552.1;Name=UTX04552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257990.1;locus_tag=NM058_16170;product=MFS transporter;protein_id=UTX04552.1;transl_table=11 CP101611.1 Genbank gene 3094810 3095964 . + . ID=gene-NM058_16175;Name=NM058_16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16175 CP101611.1 Protein Homology CDS 3094810 3095964 . + 0 ID=cds-UTX04553.1;Parent=gene-NM058_16175;Dbxref=NCBI_GP:UTX04553.1;Name=UTX04553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388938.1;locus_tag=NM058_16175;product=AbrB family transcriptional regulator;protein_id=UTX04553.1;transl_table=11 CP101611.1 Genbank gene 3096013 3096192 . + . ID=gene-NM058_16180;Name=NM058_16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16180 CP101611.1 Protein Homology CDS 3096013 3096192 . + 0 ID=cds-UTX07071.1;Parent=gene-NM058_16180;Dbxref=NCBI_GP:UTX07071.1;Name=UTX07071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010329295.1;locus_tag=NM058_16180;product=hypothetical protein;protein_id=UTX07071.1;transl_table=11 CP101611.1 Genbank gene 3096219 3096746 . - . ID=gene-NM058_16185;Name=NM058_16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16185 CP101611.1 Protein Homology CDS 3096219 3096746 . - 0 ID=cds-UTX04554.1;Parent=gene-NM058_16185;Dbxref=NCBI_GP:UTX04554.1;Name=UTX04554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388932.1;locus_tag=NM058_16185;product=MarR family transcriptional regulator;protein_id=UTX04554.1;transl_table=11 CP101611.1 Genbank gene 3096823 3098316 . - . ID=gene-NM058_16190;Name=NM058_16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16190 CP101611.1 Protein Homology CDS 3096823 3098316 . - 0 ID=cds-UTX04555.1;Parent=gene-NM058_16190;Dbxref=NCBI_GP:UTX04555.1;Name=UTX04555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388931.1;locus_tag=NM058_16190;product=monooxygenase;protein_id=UTX04555.1;transl_table=11 CP101611.1 Genbank gene 3098484 3099005 . - . ID=gene-NM058_16195;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=NM058_16195 CP101611.1 Protein Homology CDS 3098484 3099005 . - 0 ID=cds-UTX04556.1;Parent=gene-NM058_16195;Dbxref=NCBI_GP:UTX04556.1;Name=UTX04556.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003239429.1;locus_tag=NM058_16195;product=signal peptidase I;protein_id=UTX04556.1;transl_table=11 CP101611.1 Genbank gene 3099007 3099630 . - . ID=gene-NM058_16200;Name=NM058_16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16200 CP101611.1 Protein Homology CDS 3099007 3099630 . - 0 ID=cds-UTX04557.1;Parent=gene-NM058_16200;Dbxref=NCBI_GP:UTX04557.1;Name=UTX04557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388929.1;locus_tag=NM058_16200;product=TVP38/TMEM64 family protein;protein_id=UTX04557.1;transl_table=11 CP101611.1 Genbank gene 3099784 3100146 . + . ID=gene-NM058_16205;Name=NM058_16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16205 CP101611.1 Protein Homology CDS 3099784 3100146 . + 0 ID=cds-UTX04558.1;Parent=gene-NM058_16205;Dbxref=NCBI_GP:UTX04558.1;Name=UTX04558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014113285.1;locus_tag=NM058_16205;product=hypothetical protein;protein_id=UTX04558.1;transl_table=11 CP101611.1 Genbank gene 3100364 3100564 . + . ID=gene-NM058_16210;Name=NM058_16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16210 CP101611.1 Protein Homology CDS 3100364 3100564 . + 0 ID=cds-UTX04559.1;Parent=gene-NM058_16210;Dbxref=NCBI_GP:UTX04559.1;Name=UTX04559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388927.1;locus_tag=NM058_16210;product=DUF3311 domain-containing protein;protein_id=UTX04559.1;transl_table=11 CP101611.1 Genbank gene 3100577 3102031 . + . ID=gene-NM058_16215;Name=NM058_16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16215 CP101611.1 Protein Homology CDS 3100577 3102031 . + 0 ID=cds-UTX04560.1;Parent=gene-NM058_16215;Dbxref=NCBI_GP:UTX04560.1;Name=UTX04560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010329290.1;locus_tag=NM058_16215;product=sodium:solute symporter;protein_id=UTX04560.1;transl_table=11 CP101611.1 Genbank gene 3102074 3102343 . - . ID=gene-NM058_16220;Name=NM058_16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16220 CP101611.1 Protein Homology CDS 3102074 3102343 . - 0 ID=cds-UTX04561.1;Parent=gene-NM058_16220;Dbxref=NCBI_GP:UTX04561.1;Name=UTX04561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388925.1;locus_tag=NM058_16220;product=excalibur calcium-binding domain-containing protein;protein_id=UTX04561.1;transl_table=11 CP101611.1 Genbank pseudogene 3102551 3103449 . + . ID=gene-NM058_16225;Name=NM058_16225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16225;pseudo=true CP101611.1 Protein Homology CDS 3102551 3103449 . + 0 ID=cds-NM058_16225;Parent=gene-NM058_16225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388924.1;locus_tag=NM058_16225;product=SDR family oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3103495 3104073 . - . ID=gene-NM058_16230;Name=comK;gbkey=Gene;gene=comK;gene_biotype=protein_coding;locus_tag=NM058_16230 CP101611.1 Protein Homology CDS 3103495 3104073 . - 0 ID=cds-UTX04562.1;Parent=gene-NM058_16230;Dbxref=NCBI_GP:UTX04562.1;Name=UTX04562.1;gbkey=CDS;gene=comK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388923.1;locus_tag=NM058_16230;product=competence transcription factor ComK;protein_id=UTX04562.1;transl_table=11 CP101611.1 Genbank gene 3104366 3104599 . + . ID=gene-NM058_16235;Name=NM058_16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16235 CP101611.1 Protein Homology CDS 3104366 3104599 . + 0 ID=cds-UTX04563.1;Parent=gene-NM058_16235;Dbxref=NCBI_GP:UTX04563.1;Name=UTX04563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388922.1;locus_tag=NM058_16235;product=IDEAL domain-containing protein;protein_id=UTX04563.1;transl_table=11 CP101611.1 Genbank gene 3104626 3105483 . - . ID=gene-NM058_16240;Name=NM058_16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16240 CP101611.1 Protein Homology CDS 3104626 3105483 . - 0 ID=cds-UTX04564.1;Parent=gene-NM058_16240;Dbxref=NCBI_GP:UTX04564.1;Name=UTX04564.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388921.1;locus_tag=NM058_16240;product=SDR family oxidoreductase;protein_id=UTX04564.1;transl_table=11 CP101611.1 Genbank pseudogene 3105595 3107123 . + . ID=gene-NM058_16245;Name=NM058_16245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16245;pseudo=true CP101611.1 Protein Homology CDS 3105595 3107123 . + 0 ID=cds-NM058_16245;Parent=gene-NM058_16245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388920.1;locus_tag=NM058_16245;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3107263 3108561 . + . ID=gene-NM058_16250;Name=hemAT;gbkey=Gene;gene=hemAT;gene_biotype=protein_coding;locus_tag=NM058_16250 CP101611.1 Protein Homology CDS 3107263 3108561 . + 0 ID=cds-UTX04565.1;Parent=gene-NM058_16250;Dbxref=NCBI_GP:UTX04565.1;Name=UTX04565.1;gbkey=CDS;gene=hemAT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388919.1;locus_tag=NM058_16250;product=heme-based aerotactic transducer HemAT;protein_id=UTX04565.1;transl_table=11 CP101611.1 Genbank pseudogene 3108696 3109255 . + . ID=gene-NM058_16255;Name=NM058_16255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16255;pseudo=true CP101611.1 Protein Homology CDS 3108696 3109255 . + 0 ID=cds-NM058_16255;Parent=gene-NM058_16255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388918.1;locus_tag=NM058_16255;product=biotin transporter BioY;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3109260 3110699 . + . ID=gene-NM058_16260;Name=NM058_16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16260 CP101611.1 Protein Homology CDS 3109260 3110699 . + 0 ID=cds-UTX04566.1;Parent=gene-NM058_16260;Dbxref=NCBI_GP:UTX04566.1;Name=UTX04566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257975.1;locus_tag=NM058_16260;product=acyl-CoA synthetase;protein_id=UTX04566.1;transl_table=11 CP101611.1 Genbank pseudogene 3110701 3111795 . + . ID=gene-NM058_16265;Name=NM058_16265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16265;pseudo=true CP101611.1 Protein Homology CDS 3110701 3111795 . + 0 ID=cds-NM058_16265;Parent=gene-NM058_16265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388916.1;locus_tag=NM058_16265;product=acetyl-CoA C-acyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3111866 3112447 . + . ID=gene-NM058_16270;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=NM058_16270 CP101611.1 Protein Homology CDS 3111866 3112447 . + 0 ID=cds-UTX04567.1;Parent=gene-NM058_16270;Dbxref=NCBI_GP:UTX04567.1;Name=UTX04567.1;gbkey=CDS;gene=phoE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388915.1;locus_tag=NM058_16270;product=phosphatase PhoE;protein_id=UTX04567.1;transl_table=11 CP101611.1 Genbank gene 3112479 3113450 . - . ID=gene-NM058_16275;Name=NM058_16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16275 CP101611.1 Protein Homology CDS 3112479 3113450 . - 0 ID=cds-UTX04568.1;Parent=gene-NM058_16275;Dbxref=NCBI_GP:UTX04568.1;Name=UTX04568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388914.2;locus_tag=NM058_16275;product=ABC transporter substrate-binding protein;protein_id=UTX04568.1;transl_table=11 CP101611.1 Genbank gene 3113620 3113988 . + . ID=gene-NM058_16280;Name=NM058_16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16280 CP101611.1 GeneMarkS-2+ CDS 3113620 3113988 . + 0 ID=cds-UTX04569.1;Parent=gene-NM058_16280;Dbxref=NCBI_GP:UTX04569.1;Name=UTX04569.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_16280;product=hypothetical protein;protein_id=UTX04569.1;transl_table=11 CP101611.1 Genbank gene 3113935 3114927 . - . ID=gene-NM058_16285;Name=NM058_16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16285 CP101611.1 Protein Homology CDS 3113935 3114927 . - 0 ID=cds-UTX04570.1;Parent=gene-NM058_16285;Dbxref=NCBI_GP:UTX04570.1;Name=UTX04570.1;Ontology_term=GO:0008152,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388913.1;locus_tag=NM058_16285;product=acryloyl-CoA reductase;protein_id=UTX04570.1;transl_table=11 CP101611.1 Genbank pseudogene 3114999 3115446 . - . ID=gene-NM058_16290;Name=NM058_16290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16290;pseudo=true CP101611.1 Protein Homology CDS 3114999 3115446 . - 0 ID=cds-NM058_16290;Parent=gene-NM058_16290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388912.1;locus_tag=NM058_16290;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3115890 3117032 . + . ID=gene-NM058_16295;Name=aprE;gbkey=Gene;gene=aprE;gene_biotype=protein_coding;locus_tag=NM058_16295 CP101611.1 Protein Homology CDS 3115890 3117032 . + 0 ID=cds-UTX04571.1;Parent=gene-NM058_16295;Dbxref=NCBI_GP:UTX04571.1;Name=UTX04571.1;gbkey=CDS;gene=aprE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388911.2;locus_tag=NM058_16295;product=subtilisin AprE;protein_id=UTX04571.1;transl_table=11 CP101611.1 Genbank gene 3117071 3118363 . - . ID=gene-NM058_16300;Name=NM058_16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16300 CP101611.1 Protein Homology CDS 3117071 3118363 . - 0 ID=cds-UTX04572.1;Parent=gene-NM058_16300;Dbxref=NCBI_GP:UTX04572.1;Name=UTX04572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388910.1;locus_tag=NM058_16300;product=M48 family metallopeptidase;protein_id=UTX04572.1;transl_table=11 CP101611.1 Genbank pseudogene 3118513 3118906 . + . ID=gene-NM058_16305;Name=NM058_16305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16305;pseudo=true CP101611.1 Protein Homology CDS 3118513 3118906 . + 0 ID=cds-NM058_16305;Parent=gene-NM058_16305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388909.1;locus_tag=NM058_16305;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3118947 3120488 . - . ID=gene-NM058_16310;Name=lcfB;gbkey=Gene;gene=lcfB;gene_biotype=protein_coding;locus_tag=NM058_16310 CP101611.1 Protein Homology CDS 3118947 3120488 . - 0 ID=cds-UTX04573.1;Parent=gene-NM058_16310;Dbxref=NCBI_GP:UTX04573.1;Name=UTX04573.1;gbkey=CDS;gene=lcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388908.2;locus_tag=NM058_16310;product=long-chain-fatty-acid--CoA ligase LcfB;protein_id=UTX04573.1;transl_table=11 CP101611.1 Genbank pseudogene 3120606 3121249 . - . ID=gene-NM058_16315;Name=NM058_16315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16315;pseudo=true CP101611.1 Protein Homology CDS 3120606 3121249 . - 0 ID=cds-NM058_16315;Parent=gene-NM058_16315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388907.1;locus_tag=NM058_16315;product=SDR family oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3121314 3122309 . - . ID=gene-NM058_16320;Name=lplJ;gbkey=Gene;gene=lplJ;gene_biotype=protein_coding;locus_tag=NM058_16320 CP101611.1 Protein Homology CDS 3121314 3122309 . - 0 ID=cds-UTX04574.1;Parent=gene-NM058_16320;Dbxref=NCBI_GP:UTX04574.1;Name=UTX04574.1;gbkey=CDS;gene=lplJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388906.1;locus_tag=NM058_16320;product=lipoate--protein ligase LplJ;protein_id=UTX04574.1;transl_table=11 CP101611.1 Genbank pseudogene 3122322 3123054 . - . ID=gene-NM058_16325;Name=NM058_16325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16325;pseudo=true CP101611.1 Protein Homology CDS 3122322 3123054 . - 0 ID=cds-NM058_16325;Parent=gene-NM058_16325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388905.1;locus_tag=NM058_16325;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3123206 3123346 . + . ID=gene-NM058_16330;Name=NM058_16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16330 CP101611.1 Protein Homology CDS 3123206 3123346 . + 0 ID=cds-UTX04575.1;Parent=gene-NM058_16330;Dbxref=NCBI_GP:UTX04575.1;Name=UTX04575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388904.1;locus_tag=NM058_16330;product=YhfH family protein;protein_id=UTX04575.1;transl_table=11 CP101611.1 Genbank pseudogene 3123617 3124904 . + . ID=gene-NM058_16335;Name=gltT;gbkey=Gene;gene=gltT;gene_biotype=pseudogene;locus_tag=NM058_16335;pseudo=true CP101611.1 Protein Homology CDS 3123617 3124904 . + 0 ID=cds-NM058_16335;Parent=gene-NM058_16335;Note=frameshifted;gbkey=CDS;gene=gltT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388903.1;locus_tag=NM058_16335;product=glutamate/proton symporter GltT;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3124941 3125347 . - . ID=gene-NM058_16340;Name=NM058_16340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16340;pseudo=true CP101611.1 Protein Homology CDS 3124941 3125347 . - 0 ID=cds-NM058_16340;Parent=gene-NM058_16340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388902.1;locus_tag=NM058_16340;product=ASCH domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3125360 3126400 . - . ID=gene-NM058_16345;Name=NM058_16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16345 CP101611.1 Protein Homology CDS 3125360 3126400 . - 0 ID=cds-UTX04576.1;Parent=gene-NM058_16345;Dbxref=NCBI_GP:UTX04576.1;Name=UTX04576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388901.1;locus_tag=NM058_16345;product=M42 family metallopeptidase;protein_id=UTX04576.1;transl_table=11 CP101611.1 Genbank gene 3126535 3126717 . - . ID=gene-NM058_16350;Name=NM058_16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16350 CP101611.1 Protein Homology CDS 3126535 3126717 . - 0 ID=cds-UTX04577.1;Parent=gene-NM058_16350;Dbxref=NCBI_GP:UTX04577.1;Name=UTX04577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003233196.1;locus_tag=NM058_16350;product=hypothetical protein;protein_id=UTX04577.1;transl_table=11 CP101611.1 Genbank gene 3126814 3127590 . - . ID=gene-NM058_16355;Name=NM058_16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16355 CP101611.1 Protein Homology CDS 3126814 3127590 . - 0 ID=cds-UTX04578.1;Parent=gene-NM058_16355;Dbxref=NCBI_GP:UTX04578.1;Name=UTX04578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388899.1;locus_tag=NM058_16355;product=YhfC family intramembrane metalloprotease;protein_id=UTX04578.1;transl_table=11 CP101611.1 Genbank gene 3127720 3128697 . + . ID=gene-NM058_16360;Name=fabHB;gbkey=Gene;gene=fabHB;gene_biotype=protein_coding;locus_tag=NM058_16360 CP101611.1 Protein Homology CDS 3127720 3128697 . + 0 ID=cds-UTX04579.1;Parent=gene-NM058_16360;Dbxref=NCBI_GP:UTX04579.1;Name=UTX04579.1;gbkey=CDS;gene=fabHB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388898.1;locus_tag=NM058_16360;product=beta-ketoacyl-ACP synthase III FabHB;protein_id=UTX04579.1;transl_table=11 CP101611.1 Genbank pseudogene 3128739 3131067 . - . ID=gene-NM058_16365;Name=NM058_16365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16365;pseudo=true CP101611.1 Protein Homology CDS 3128739 3131067 . - 0 ID=cds-NM058_16365;Parent=gene-NM058_16365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388897.1;locus_tag=NM058_16365;product=YhgE/Pip domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3131138 3131713 . - . ID=gene-NM058_16370;Name=NM058_16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16370 CP101611.1 Protein Homology CDS 3131138 3131713 . - 0 ID=cds-UTX04580.1;Parent=gene-NM058_16370;Dbxref=NCBI_GP:UTX04580.1;Name=UTX04580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388896.1;locus_tag=NM058_16370;product=TetR/AcrR family transcriptional regulator;protein_id=UTX04580.1;transl_table=11 CP101611.1 Genbank gene 3131862 3133274 . - . ID=gene-NM058_16375;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=NM058_16375 CP101611.1 Protein Homology CDS 3131862 3133274 . - 0 ID=cds-UTX04581.1;Parent=gene-NM058_16375;Dbxref=NCBI_GP:UTX04581.1;Name=UTX04581.1;Ontology_term=GO:0006779,GO:0004729;gbkey=CDS;gene=hemY;go_function=oxygen-dependent protoporphyrinogen oxidase activity|0004729||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388895.1;locus_tag=NM058_16375;product=protoporphyrinogen oxidase;protein_id=UTX04581.1;transl_table=11 CP101611.1 Genbank gene 3133289 3134221 . - . ID=gene-NM058_16380;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=NM058_16380 CP101611.1 Protein Homology CDS 3133289 3134221 . - 0 ID=cds-UTX04582.1;Parent=gene-NM058_16380;Dbxref=NCBI_GP:UTX04582.1;Name=UTX04582.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388894.1;locus_tag=NM058_16380;product=ferrochelatase;protein_id=UTX04582.1;transl_table=11 CP101611.1 Genbank pseudogene 3134293 3135353 . - . ID=gene-NM058_16385;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=pseudogene;locus_tag=NM058_16385;pseudo=true CP101611.1 Protein Homology CDS 3134293 3135353 . - 0 ID=cds-NM058_16385;Parent=gene-NM058_16385;Note=frameshifted;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388893.1;locus_tag=NM058_16385;product=uroporphyrinogen decarboxylase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3135475 3137619 . - . ID=gene-NM058_16390;Name=NM058_16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16390 CP101611.1 Protein Homology CDS 3135475 3137619 . - 0 ID=cds-UTX04583.1;Parent=gene-NM058_16390;Dbxref=NCBI_GP:UTX04583.1;Name=UTX04583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388892.2;locus_tag=NM058_16390;product=penicillin-binding protein;protein_id=UTX04583.1;transl_table=11 CP101611.1 Genbank gene 3137741 3138241 . + . ID=gene-NM058_16395;Name=hmoB;gbkey=Gene;gene=hmoB;gene_biotype=protein_coding;locus_tag=NM058_16395 CP101611.1 Protein Homology CDS 3137741 3138241 . + 0 ID=cds-UTX04584.1;Parent=gene-NM058_16395;Dbxref=NCBI_GP:UTX04584.1;Name=UTX04584.1;gbkey=CDS;gene=hmoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388891.1;locus_tag=NM058_16395;product=heme-degrading oxygenase HmoB;protein_id=UTX04584.1;transl_table=11 CP101611.1 Genbank pseudogene 3138284 3138601 . + . ID=gene-NM058_16400;Name=NM058_16400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16400;pseudo=true CP101611.1 Protein Homology CDS 3138284 3138601 . + 0 ID=cds-NM058_16400;Parent=gene-NM058_16400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388890.1;locus_tag=NM058_16400;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3138670 3140056 . + . ID=gene-NM058_16405;Name=NM058_16405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16405;pseudo=true CP101611.1 Protein Homology CDS 3138670 3140056 . + 0 ID=cds-NM058_16405;Parent=gene-NM058_16405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388889.1;locus_tag=NM058_16405;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3140124 3141314 . + . ID=gene-NM058_16410;Name=sndC;gbkey=Gene;gene=sndC;gene_biotype=protein_coding;locus_tag=NM058_16410 CP101611.1 Protein Homology CDS 3140124 3141314 . + 0 ID=cds-UTX04585.1;Parent=gene-NM058_16410;Dbxref=NCBI_GP:UTX04585.1;Name=UTX04585.1;gbkey=CDS;gene=sndC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388888.2;locus_tag=NM058_16410;product=N-acetyl amino acid acetylase SndC;protein_id=UTX04585.1;transl_table=11 CP101611.1 Genbank gene 3141331 3142041 . - . ID=gene-NM058_16415;Name=NM058_16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16415 CP101611.1 Protein Homology CDS 3141331 3142041 . - 0 ID=cds-UTX04586.1;Parent=gene-NM058_16415;Dbxref=NCBI_GP:UTX04586.1;Name=UTX04586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388887.1;locus_tag=NM058_16415;product=EcsC family protein;protein_id=UTX04586.1;transl_table=11 CP101611.1 Genbank pseudogene 3142064 3143289 . - . ID=gene-NM058_16420;Name=ecsB;gbkey=Gene;gene=ecsB;gene_biotype=pseudogene;locus_tag=NM058_16420;pseudo=true CP101611.1 Protein Homology CDS 3142064 3143289 . - 0 ID=cds-NM058_16420;Parent=gene-NM058_16420;Note=frameshifted;gbkey=CDS;gene=ecsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388886.1;locus_tag=NM058_16420;product=ABC transporter permease EcsB;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3143282 3144023 . - . ID=gene-NM058_16425;Name=ecsA;gbkey=Gene;gene=ecsA;gene_biotype=pseudogene;locus_tag=NM058_16425;pseudo=true CP101611.1 Protein Homology CDS 3143282 3144023 . - 0 ID=cds-NM058_16425;Parent=gene-NM058_16425;Note=frameshifted;gbkey=CDS;gene=ecsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388885.1;locus_tag=NM058_16425;product=ABC transporter ATP-binding protein EcsA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3144512 3144949 . + . ID=gene-NM058_16430;Name=NM058_16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16430 CP101611.1 Protein Homology CDS 3144512 3144949 . + 0 ID=cds-UTX04587.1;Parent=gene-NM058_16430;Dbxref=NCBI_GP:UTX04587.1;Name=UTX04587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388884.1;locus_tag=NM058_16430;product=HIT family protein;protein_id=UTX04587.1;transl_table=11 CP101611.1 Genbank pseudogene 3145095 3146173 . + . ID=gene-NM058_16435;Name=serC;gbkey=Gene;gene=serC;gene_biotype=pseudogene;locus_tag=NM058_16435;pseudo=true CP101611.1 Protein Homology CDS 3145095 3146173 . + 0 ID=cds-NM058_16435;Parent=gene-NM058_16435;Note=frameshifted;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388883.1;locus_tag=NM058_16435;product=3-phosphoserine/phosphohydroxythreonine transaminase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3146297 3146815 . + . ID=gene-NM058_16440;Name=NM058_16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16440 CP101611.1 Protein Homology CDS 3146297 3146815 . + 0 ID=cds-UTX04588.1;Parent=gene-NM058_16440;Dbxref=NCBI_GP:UTX04588.1;Name=UTX04588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388882.2;locus_tag=NM058_16440;product=tryptophan transporter;protein_id=UTX04588.1;transl_table=11 CP101611.1 Genbank gene 3146887 3147078 . - . ID=gene-NM058_16445;Name=NM058_16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16445 CP101611.1 Protein Homology CDS 3146887 3147078 . - 0 ID=cds-UTX04589.1;Parent=gene-NM058_16445;Dbxref=NCBI_GP:UTX04589.1;Name=UTX04589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097700.1;locus_tag=NM058_16445;product=hypothetical protein;protein_id=UTX04589.1;transl_table=11 CP101611.1 Genbank gene 3147207 3147563 . + . ID=gene-NM058_16450;Name=NM058_16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16450 CP101611.1 Protein Homology CDS 3147207 3147563 . + 0 ID=cds-UTX04590.1;Parent=gene-NM058_16450;Dbxref=NCBI_GP:UTX04590.1;Name=UTX04590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388881.1;locus_tag=NM058_16450;product=YtxH domain-containing protein;protein_id=UTX04590.1;transl_table=11 CP101611.1 Genbank gene 3147740 3148351 . + . ID=gene-NM058_16455;Name=NM058_16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16455 CP101611.1 Protein Homology CDS 3147740 3148351 . + 0 ID=cds-UTX04591.1;Parent=gene-NM058_16455;Dbxref=NCBI_GP:UTX04591.1;Name=UTX04591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388880.1;locus_tag=NM058_16455;product=HTH-type transcriptional regulator Hpr;protein_id=UTX04591.1;transl_table=11 CP101611.1 Genbank gene 3148348 3148689 . - . ID=gene-NM058_16460;Name=NM058_16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16460 CP101611.1 Protein Homology CDS 3148348 3148689 . - 0 ID=cds-UTX04592.1;Parent=gene-NM058_16460;Dbxref=NCBI_GP:UTX04592.1;Name=UTX04592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388879.1;locus_tag=NM058_16460;product=YhaI family protein;protein_id=UTX04592.1;transl_table=11 CP101611.1 Genbank pseudogene 3148896 3149412 . + . ID=gene-NM058_16465;Name=NM058_16465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16465;pseudo=true CP101611.1 Protein Homology CDS 3148896 3149412 . + 0 ID=cds-NM058_16465;Parent=gene-NM058_16465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388878.2;locus_tag=NM058_16465;product=DUF3267 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3149485 3149700 . + . ID=gene-NM058_16470;Name=NM058_16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16470 CP101611.1 Protein Homology CDS 3149485 3149700 . + 0 ID=cds-UTX04593.1;Parent=gene-NM058_16470;Dbxref=NCBI_GP:UTX04593.1;Name=UTX04593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003180249.1;locus_tag=NM058_16470;product=hypothetical protein;protein_id=UTX04593.1;transl_table=11 CP101611.1 Genbank gene 3149753 3149839 . - . ID=gene-NM058_16475;Name=yhzE2;gbkey=Gene;gene=yhzE2;gene_biotype=protein_coding;locus_tag=NM058_16475 CP101611.1 Protein Homology CDS 3149753 3149839 . - 0 ID=cds-UTX07072.1;Parent=gene-NM058_16475;Dbxref=NCBI_GP:UTX07072.1;Name=UTX07072.1;gbkey=CDS;gene=yhzE2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513948.1;locus_tag=NM058_16475;product=sporulation protein YhzE2;protein_id=UTX07072.1;transl_table=11 CP101611.1 Genbank gene 3149964 3150050 . - . ID=gene-NM058_16480;Name=yhzE1;gbkey=Gene;gene=yhzE1;gene_biotype=protein_coding;locus_tag=NM058_16480 CP101611.1 Protein Homology CDS 3149964 3150050 . - 0 ID=cds-UTX07073.1;Parent=gene-NM058_16480;Dbxref=NCBI_GP:UTX07073.1;Name=UTX07073.1;gbkey=CDS;gene=yhzE1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097699.1;locus_tag=NM058_16480;product=sporulation protein YhzE1;protein_id=UTX07073.1;transl_table=11 CP101611.1 Genbank gene 3150210 3151085 . + . ID=gene-NM058_16485;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=NM058_16485 CP101611.1 Protein Homology CDS 3150210 3151085 . + 0 ID=cds-UTX04594.1;Parent=gene-NM058_16485;Dbxref=NCBI_GP:UTX04594.1;Name=UTX04594.1;gbkey=CDS;gene=prsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388876.1;locus_tag=NM058_16485;product=peptidylprolyl isomerase PrsA;protein_id=UTX04594.1;transl_table=11 CP101611.1 Genbank gene 3151127 3151339 . - . ID=gene-NM058_16490;Name=NM058_16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16490 CP101611.1 Protein Homology CDS 3151127 3151339 . - 0 ID=cds-UTX04595.1;Parent=gene-NM058_16490;Dbxref=NCBI_GP:UTX04595.1;Name=UTX04595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388875.1;locus_tag=NM058_16490;product=sporulation YhaL family protein;protein_id=UTX04595.1;transl_table=11 CP101611.1 Genbank pseudogene 3151465 3152408 . - . ID=gene-NM058_16495;Name=yhaM;gbkey=Gene;gene=yhaM;gene_biotype=pseudogene;locus_tag=NM058_16495;pseudo=true CP101611.1 Protein Homology CDS 3151465 3152408 . - 0 ID=cds-NM058_16495;Parent=gene-NM058_16495;Note=frameshifted;gbkey=CDS;gene=yhaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388874.1;locus_tag=NM058_16495;product=3'-5' exoribonuclease YhaM;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3152482 3155377 . - . ID=gene-NM058_16500;Name=NM058_16500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16500;pseudo=true CP101611.1 Protein Homology CDS 3152482 3155377 . - 0 ID=cds-NM058_16500;Parent=gene-NM058_16500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388873.1;locus_tag=NM058_16500;product=AAA family ATPase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3155382 3156608 . - . ID=gene-NM058_16505;Name=NM058_16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16505 CP101611.1 Protein Homology CDS 3155382 3156608 . - 0 ID=cds-UTX04596.1;Parent=gene-NM058_16505;Dbxref=NCBI_GP:UTX04596.1;Name=UTX04596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388872.1;locus_tag=NM058_16505;product=DNA repair exonuclease;protein_id=UTX04596.1;transl_table=11 CP101611.1 Genbank gene 3156715 3157974 . - . ID=gene-NM058_16510;Name=NM058_16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16510 CP101611.1 Protein Homology CDS 3156715 3157974 . - 0 ID=cds-UTX04597.1;Parent=gene-NM058_16510;Dbxref=NCBI_GP:UTX04597.1;Name=UTX04597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388871.2;locus_tag=NM058_16510;product=ABC transporter permease;protein_id=UTX04597.1;transl_table=11 CP101611.1 Genbank gene 3157967 3158863 . - . ID=gene-NM058_16515;Name=NM058_16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16515 CP101611.1 Protein Homology CDS 3157967 3158863 . - 0 ID=cds-UTX04598.1;Parent=gene-NM058_16515;Dbxref=NCBI_GP:UTX04598.1;Name=UTX04598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388870.2;locus_tag=NM058_16515;product=ABC transporter ATP-binding protein;protein_id=UTX04598.1;transl_table=11 CP101611.1 Genbank gene 3158991 3159176 . + . ID=gene-NM058_16520;Name=NM058_16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16520 CP101611.1 Protein Homology CDS 3158991 3159176 . + 0 ID=cds-UTX04599.1;Parent=gene-NM058_16520;Dbxref=NCBI_GP:UTX04599.1;Name=UTX04599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097698.1;locus_tag=NM058_16520;product=hypothetical protein;protein_id=UTX04599.1;transl_table=11 CP101611.1 Genbank gene 3159197 3159964 . - . ID=gene-NM058_16525;Name=NM058_16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16525 CP101611.1 Protein Homology CDS 3159197 3159964 . - 0 ID=cds-UTX04600.1;Parent=gene-NM058_16525;Dbxref=NCBI_GP:UTX04600.1;Name=UTX04600.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003224251.1;locus_tag=NM058_16525;product=enoyl-CoA hydratase;protein_id=UTX04600.1;transl_table=11 CP101611.1 Genbank gene 3160130 3160468 . + . ID=gene-NM058_16530;Name=NM058_16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16530 CP101611.1 Protein Homology CDS 3160130 3160468 . + 0 ID=cds-UTX04601.1;Parent=gene-NM058_16530;Dbxref=NCBI_GP:UTX04601.1;Name=UTX04601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388868.1;locus_tag=NM058_16530;product=hypothetical protein;protein_id=UTX04601.1;transl_table=11 CP101611.1 Genbank gene 3160526 3161023 . + . ID=gene-NM058_16535;Name=khtT;gbkey=Gene;gene=khtT;gene_biotype=protein_coding;locus_tag=NM058_16535 CP101611.1 Protein Homology CDS 3160526 3161023 . + 0 ID=cds-UTX04602.1;Parent=gene-NM058_16535;Dbxref=NCBI_GP:UTX04602.1;Name=UTX04602.1;gbkey=CDS;gene=khtT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388867.1;locus_tag=NM058_16535;product=K(+)/H(+) antiporter subunit KhtT;protein_id=UTX04602.1;transl_table=11 CP101611.1 Genbank gene 3161031 3162248 . + . ID=gene-NM058_16540;Name=khtU;gbkey=Gene;gene=khtU;gene_biotype=protein_coding;locus_tag=NM058_16540 CP101611.1 Protein Homology CDS 3161031 3162248 . + 0 ID=cds-UTX04603.1;Parent=gene-NM058_16540;Dbxref=NCBI_GP:UTX04603.1;Name=UTX04603.1;gbkey=CDS;gene=khtU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388866.2;locus_tag=NM058_16540;product=K(+)/H(+) antiporter subunit KhtU;protein_id=UTX04603.1;transl_table=11 CP101611.1 Genbank pseudogene 3162266 3163770 . - . ID=gene-NM058_16545;Name=NM058_16545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16545;pseudo=true CP101611.1 Protein Homology CDS 3162266 3163770 . - 0 ID=cds-NM058_16545;Parent=gene-NM058_16545;Note=frameshifted;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388865.1;locus_tag=NM058_16545;product=coproporphyrinogen III oxidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3163882 3164748 . - . ID=gene-NM058_16550;Name=NM058_16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16550 CP101611.1 Protein Homology CDS 3163882 3164748 . - 0 ID=cds-UTX04604.1;Parent=gene-NM058_16550;Dbxref=NCBI_GP:UTX04604.1;Name=UTX04604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388864.2;locus_tag=NM058_16550;product=Cof-type HAD-IIB family hydrolase;protein_id=UTX04604.1;transl_table=11 CP101611.1 Genbank gene 3165237 3166310 . + . ID=gene-NM058_16555;Name=NM058_16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16555 CP101611.1 Protein Homology CDS 3165237 3166310 . + 0 ID=cds-UTX04605.1;Parent=gene-NM058_16555;Dbxref=NCBI_GP:UTX04605.1;Name=UTX04605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388862.1;locus_tag=NM058_16555;product=DNA alkylation repair protein;protein_id=UTX04605.1;transl_table=11 CP101611.1 Genbank gene 3166354 3166707 . - . ID=gene-NM058_16560;Name=NM058_16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16560 CP101611.1 Protein Homology CDS 3166354 3166707 . - 0 ID=cds-UTX04606.1;Parent=gene-NM058_16560;Dbxref=NCBI_GP:UTX04606.1;Name=UTX04606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388861.1;locus_tag=NM058_16560;product=YlbF family regulator;protein_id=UTX04606.1;transl_table=11 CP101611.1 Genbank gene 3166800 3167933 . - . ID=gene-NM058_16565;Name=NM058_16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16565 CP101611.1 Protein Homology CDS 3166800 3167933 . - 0 ID=cds-UTX04607.1;Parent=gene-NM058_16565;Dbxref=NCBI_GP:UTX04607.1;Name=UTX04607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388860.1;locus_tag=NM058_16565;product=DUF445 family protein;protein_id=UTX04607.1;transl_table=11 CP101611.1 Genbank gene 3168200 3169291 . + . ID=gene-NM058_16570;Name=spaC;gbkey=Gene;gene=spaC;gene_biotype=protein_coding;locus_tag=NM058_16570 CP101611.1 Protein Homology CDS 3168200 3169291 . + 0 ID=cds-UTX04608.1;Parent=gene-NM058_16570;Dbxref=NCBI_GP:UTX04608.1;Name=UTX04608.1;gbkey=CDS;gene=spaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388859.1;locus_tag=NM058_16570;product=spore coat associated protein SpaC;protein_id=UTX04608.1;transl_table=11 CP101611.1 Genbank pseudogene 3169281 3170639 . + . ID=gene-NM058_16575;Name=yheD;gbkey=Gene;gene=yheD;gene_biotype=pseudogene;locus_tag=NM058_16575;pseudo=true CP101611.1 Protein Homology CDS 3169281 3170639 . + 0 ID=cds-NM058_16575;Parent=gene-NM058_16575;Note=frameshifted;gbkey=CDS;gene=yheD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388858.2;locus_tag=NM058_16575;product=spore coat associated protein YheD;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3170790 3171008 . + . ID=gene-NM058_16580;Name=NM058_16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16580 CP101611.1 Protein Homology CDS 3170790 3171008 . + 0 ID=cds-UTX04609.1;Parent=gene-NM058_16580;Dbxref=NCBI_GP:UTX04609.1;Name=UTX04609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388857.1;locus_tag=NM058_16580;product=YheE family protein;protein_id=UTX04609.1;transl_table=11 CP101611.1 Genbank gene 3171218 3171421 . + . ID=gene-NM058_16585;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=NM058_16585 CP101611.1 Protein Homology CDS 3171218 3171421 . + 0 ID=cds-UTX04610.1;Parent=gene-NM058_16585;Dbxref=NCBI_GP:UTX04610.1;Name=UTX04610.1;Ontology_term=GO:0003690;gbkey=CDS;gene=sspB;go_function=double-stranded DNA binding|0003690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388856.1;locus_tag=NM058_16585;product=beta type acid-soluble spore protein SspB;protein_id=UTX04610.1;transl_table=11 CP101611.1 Genbank gene 3171526 3171651 . + . ID=gene-NM058_16590;Name=NM058_16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16590 CP101611.1 Protein Homology CDS 3171526 3171651 . + 0 ID=cds-UTX04611.1;Parent=gene-NM058_16590;Dbxref=NCBI_GP:UTX04611.1;Name=UTX04611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388855.1;locus_tag=NM058_16590;product=hypothetical protein;protein_id=UTX04611.1;transl_table=11 CP101611.1 Genbank gene 3171689 3172309 . + . ID=gene-NM058_16595;Name=NM058_16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16595 CP101611.1 Protein Homology CDS 3171689 3172309 . + 0 ID=cds-UTX04612.1;Parent=gene-NM058_16595;Dbxref=NCBI_GP:UTX04612.1;Name=UTX04612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388854.1;locus_tag=NM058_16595;product=SDR family oxidoreductase;protein_id=UTX04612.1;transl_table=11 CP101611.1 Genbank pseudogene 3172356 3174376 . - . ID=gene-NM058_16600;Name=bmrD;gbkey=Gene;gene=bmrD;gene_biotype=pseudogene;gene_synonym=yheH;locus_tag=NM058_16600;pseudo=true CP101611.1 Protein Homology CDS 3172356 3174376 . - 0 ID=cds-NM058_16600;Parent=gene-NM058_16600;Note=frameshifted;gbkey=CDS;gene=bmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388853.1;locus_tag=NM058_16600;product=multidrug resistance ABC transporter ATP-binding protein/permease BmrD;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3174387 3176129 . - . ID=gene-NM058_16605;Name=NM058_16605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16605;pseudo=true CP101611.1 Protein Homology CDS 3174387 3176129 . - 0 ID=cds-NM058_16605;Parent=gene-NM058_16605;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388852.1;locus_tag=NM058_16605;product=ABC transporter ATP-binding protein/permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3176248 3176409 . - . ID=gene-NM058_16610;Name=NM058_16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16610 CP101611.1 Protein Homology CDS 3176248 3176409 . - 0 ID=cds-UTX07074.1;Parent=gene-NM058_16610;Dbxref=NCBI_GP:UTX07074.1;Name=UTX07074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388851.1;locus_tag=NM058_16610;product=hypothetical protein;protein_id=UTX07074.1;transl_table=11 CP101611.1 Genbank gene 3176573 3177073 . + . ID=gene-NM058_16615;Name=NM058_16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16615 CP101611.1 Protein Homology CDS 3176573 3177073 . + 0 ID=cds-UTX07075.1;Parent=gene-NM058_16615;Dbxref=NCBI_GP:UTX07075.1;Name=UTX07075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388850.2;locus_tag=NM058_16615;product=universal stress protein;protein_id=UTX07075.1;transl_table=11 CP101611.1 Genbank gene 3177197 3178558 . + . ID=gene-NM058_16620;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=NM058_16620 CP101611.1 Protein Homology CDS 3177197 3178558 . + 0 ID=cds-UTX04613.1;Parent=gene-NM058_16620;Dbxref=NCBI_GP:UTX04613.1;Name=UTX04613.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaC;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388849.1;locus_tag=NM058_16620;product=Na+/H+ antiporter NhaC;protein_id=UTX04613.1;transl_table=11 CP101611.1 Genbank gene 3178601 3179449 . - . ID=gene-NM058_16625;Name=dat;gbkey=Gene;gene=dat;gene_biotype=protein_coding;locus_tag=NM058_16625 CP101611.1 Protein Homology CDS 3178601 3179449 . - 0 ID=cds-UTX04614.1;Parent=gene-NM058_16625;Dbxref=NCBI_GP:UTX04614.1;Name=UTX04614.1;Ontology_term=GO:0019480,GO:0047810;gbkey=CDS;gene=dat;go_function=D-alanine:2-oxoglutarate aminotransferase activity|0047810||IEA;go_process=L-alanine oxidation to pyruvate via D-alanine|0019480||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388848.1;locus_tag=NM058_16625;product=D-amino-acid transaminase;protein_id=UTX04614.1;transl_table=11 CP101611.1 Genbank gene 3179735 3180583 . + . ID=gene-NM058_16630;Name=NM058_16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16630 CP101611.1 Protein Homology CDS 3179735 3180583 . + 0 ID=cds-UTX04615.1;Parent=gene-NM058_16630;Dbxref=NCBI_GP:UTX04615.1;Name=UTX04615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388847.1;locus_tag=NM058_16630;product=polysaccharide deacetylase;protein_id=UTX04615.1;transl_table=11 CP101611.1 Genbank gene 3180610 3181353 . - . ID=gene-NM058_16635;Name=srtN;gbkey=Gene;gene=srtN;gene_biotype=protein_coding;locus_tag=NM058_16635 CP101611.1 Protein Homology CDS 3180610 3181353 . - 0 ID=cds-UTX04616.1;Parent=gene-NM058_16635;Dbxref=NCBI_GP:UTX04616.1;Name=UTX04616.1;gbkey=CDS;gene=srtN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388846.1;locus_tag=NM058_16635;product=sirtuin NAD-dependent deacetylase;protein_id=UTX04616.1;transl_table=11 CP101611.1 Genbank gene 3181427 3182542 . - . ID=gene-NM058_16640;Name=mscY;gbkey=Gene;gene=mscY;gene_biotype=protein_coding;gene_synonym=yhdY;locus_tag=NM058_16640 CP101611.1 Protein Homology CDS 3181427 3182542 . - 0 ID=cds-UTX04617.1;Parent=gene-NM058_16640;Dbxref=NCBI_GP:UTX04617.1;Name=UTX04617.1;gbkey=CDS;gene=mscY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388845.1;locus_tag=NM058_16640;product=small-conductance mechanosensitive channel protein MscY;protein_id=UTX04617.1;transl_table=11 CP101611.1 Genbank gene 3182693 3182800 . - . ID=gene-NM058_16645;Name=NM058_16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16645 CP101611.1 Protein Homology CDS 3182693 3182800 . - 0 ID=cds-UTX04618.1;Parent=gene-NM058_16645;Dbxref=NCBI_GP:UTX04618.1;Name=UTX04618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388844.1;locus_tag=NM058_16645;product=YhdX family protein;protein_id=UTX04618.1;transl_table=11 CP101611.1 Genbank gene 3183034 3183765 . + . ID=gene-NM058_16650;Name=NM058_16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16650 CP101611.1 Protein Homology CDS 3183034 3183765 . + 0 ID=cds-UTX04619.1;Parent=gene-NM058_16650;Dbxref=NCBI_GP:UTX04619.1;Name=UTX04619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388843.1;locus_tag=NM058_16650;product=glycerophosphodiester phosphodiesterase;protein_id=UTX04619.1;transl_table=11 CP101611.1 Genbank gene 3183752 3184147 . + . ID=gene-NM058_16655;Name=NM058_16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16655 CP101611.1 Protein Homology CDS 3183752 3184147 . + 0 ID=cds-UTX04620.1;Parent=gene-NM058_16655;Dbxref=NCBI_GP:UTX04620.1;Name=UTX04620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388842.1;locus_tag=NM058_16655;product=CrcB family protein;protein_id=UTX04620.1;transl_table=11 CP101611.1 Genbank gene 3184144 3184500 . + . ID=gene-NM058_16660;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=NM058_16660 CP101611.1 Protein Homology CDS 3184144 3184500 . + 0 ID=cds-UTX04621.1;Parent=gene-NM058_16660;Dbxref=NCBI_GP:UTX04621.1;Name=UTX04621.1;Ontology_term=GO:1903424,GO:1903425,GO:0016021;gbkey=CDS;gene=crcB;go_component=integral component of membrane|0016021||IEA;go_function=fluoride transmembrane transporter activity|1903425||IEA;go_process=fluoride transmembrane transport|1903424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003239541.1;locus_tag=NM058_16660;product=fluoride efflux transporter CrcB;protein_id=UTX04621.1;transl_table=11 CP101611.1 Genbank gene 3184515 3185900 . - . ID=gene-NM058_16665;Name=NM058_16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16665 CP101611.1 Protein Homology CDS 3184515 3185900 . - 0 ID=cds-UTX04622.1;Parent=gene-NM058_16665;Dbxref=NCBI_GP:UTX04622.1;Name=UTX04622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388840.1;locus_tag=NM058_16665;product=hemolysin family protein;protein_id=UTX04622.1;transl_table=11 CP101611.1 Genbank pseudogene 3186192 3187372 . - . ID=gene-NM058_16670;Name=NM058_16670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16670;pseudo=true CP101611.1 Protein Homology CDS 3186192 3187372 . - 0 ID=cds-NM058_16670;Parent=gene-NM058_16670;Note=frameshifted;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388838.1;locus_tag=NM058_16670;product=pyridoxal phosphate-dependent aminotransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3187527 3187958 . + . ID=gene-NM058_16675;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=NM058_16675 CP101611.1 Protein Homology CDS 3187527 3187958 . + 0 ID=cds-UTX07076.1;Parent=gene-NM058_16675;Dbxref=NCBI_GP:UTX07076.1;Name=UTX07076.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388837.1;locus_tag=NM058_16675;product=Cu(I)-responsive transcriptional regulator;protein_id=UTX07076.1;transl_table=11 CP101611.1 Genbank gene 3188019 3189353 . + . ID=gene-NM058_16680;Name=NM058_16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16680 CP101611.1 Protein Homology CDS 3188019 3189353 . + 0 ID=cds-UTX04623.1;Parent=gene-NM058_16680;Dbxref=NCBI_GP:UTX04623.1;Name=UTX04623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003327797.1;locus_tag=NM058_16680;product=hemolysin family protein;protein_id=UTX04623.1;transl_table=11 CP101611.1 Genbank gene 3189514 3190413 . + . ID=gene-NM058_16685;Name=NM058_16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16685 CP101611.1 Protein Homology CDS 3189514 3190413 . + 0 ID=cds-UTX04624.1;Parent=gene-NM058_16685;Dbxref=NCBI_GP:UTX04624.1;Name=UTX04624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003239553.1;locus_tag=NM058_16685;product=NAD(P)-dependent oxidoreductase;protein_id=UTX04624.1;transl_table=11 CP101611.1 Genbank gene 3190402 3191559 . - . ID=gene-NM058_16690;Name=NM058_16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16690 CP101611.1 Protein Homology CDS 3190402 3191559 . - 0 ID=cds-UTX04625.1;Parent=gene-NM058_16690;Dbxref=NCBI_GP:UTX04625.1;Name=UTX04625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017426999.1;locus_tag=NM058_16690;product=FAD-binding oxidoreductase;protein_id=UTX04625.1;transl_table=11 CP101611.1 Genbank gene 3191661 3192260 . - . ID=gene-NM058_16695;Name=NM058_16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16695 CP101611.1 Protein Homology CDS 3191661 3192260 . - 0 ID=cds-UTX04626.1;Parent=gene-NM058_16695;Dbxref=NCBI_GP:UTX04626.1;Name=UTX04626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388835.1;locus_tag=NM058_16695;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=UTX04626.1;transl_table=11 CP101611.1 Genbank gene 3192395 3193390 . - . ID=gene-NM058_16700;Name=akrN;gbkey=Gene;gene=akrN;gene_biotype=protein_coding;gene_synonym=yhdN;locus_tag=NM058_16700 CP101611.1 Protein Homology CDS 3192395 3193390 . - 0 ID=cds-UTX04627.1;Parent=gene-NM058_16700;Dbxref=NCBI_GP:UTX04627.1;Name=UTX04627.1;gbkey=CDS;gene=akrN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388834.1;locus_tag=NM058_16700;product=aldo/keto reductase AkrN;protein_id=UTX04627.1;transl_table=11 CP101611.1 Genbank gene 3193587 3194078 . + . ID=gene-NM058_16705;Name=sigM;gbkey=Gene;gene=sigM;gene_biotype=protein_coding;locus_tag=NM058_16705 CP101611.1 Protein Homology CDS 3193587 3194078 . + 0 ID=cds-UTX04628.1;Parent=gene-NM058_16705;Dbxref=NCBI_GP:UTX04628.1;Name=UTX04628.1;gbkey=CDS;gene=sigM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388833.1;locus_tag=NM058_16705;product=RNA polymerase sigma factor SigM;protein_id=UTX04628.1;transl_table=11 CP101611.1 Genbank gene 3194068 3195144 . + . ID=gene-NM058_16710;Name=NM058_16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16710 CP101611.1 Protein Homology CDS 3194068 3195144 . + 0 ID=cds-UTX04629.1;Parent=gene-NM058_16710;Dbxref=NCBI_GP:UTX04629.1;Name=UTX04629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388832.1;locus_tag=NM058_16710;product=anti-sigma factor;protein_id=UTX04629.1;transl_table=11 CP101611.1 Genbank gene 3195132 3195422 . + . ID=gene-NM058_16715;Name=NM058_16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16715 CP101611.1 Protein Homology CDS 3195132 3195422 . + 0 ID=cds-UTX04630.1;Parent=gene-NM058_16715;Dbxref=NCBI_GP:UTX04630.1;Name=UTX04630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388831.1;locus_tag=NM058_16715;product=anti-sigma factor;protein_id=UTX04630.1;transl_table=11 CP101611.1 Genbank gene 3195455 3195883 . - . ID=gene-NM058_16720;Name=NM058_16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16720 CP101611.1 Protein Homology CDS 3195455 3195883 . - 0 ID=cds-UTX04631.1;Parent=gene-NM058_16720;Dbxref=NCBI_GP:UTX04631.1;Name=UTX04631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388830.1;locus_tag=NM058_16720;product=GNAT family N-acetyltransferase;protein_id=UTX04631.1;transl_table=11 CP101611.1 Genbank gene 3195993 3197402 . + . ID=gene-NM058_16725;Name=NM058_16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16725 CP101611.1 Protein Homology CDS 3195993 3197402 . + 0 ID=cds-UTX04632.1;Parent=gene-NM058_16725;Dbxref=NCBI_GP:UTX04632.1;Name=UTX04632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003239561.1;locus_tag=NM058_16725;product=PLP-dependent aminotransferase family protein;protein_id=UTX04632.1;transl_table=11 CP101611.1 Genbank gene 3197435 3198790 . - . ID=gene-NM058_16730;Name=NM058_16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16730 CP101611.1 Protein Homology CDS 3197435 3198790 . - 0 ID=cds-UTX04633.1;Parent=gene-NM058_16730;Dbxref=NCBI_GP:UTX04633.1;Name=UTX04633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388828.1;locus_tag=NM058_16730;product=sodium-dependent transporter;protein_id=UTX04633.1;transl_table=11 CP101611.1 Genbank gene 3198911 3200308 . - . ID=gene-NM058_16735;Name=bcaP;gbkey=Gene;gene=bcaP;gene_biotype=protein_coding;locus_tag=NM058_16735 CP101611.1 Protein Homology CDS 3198911 3200308 . - 0 ID=cds-UTX04634.1;Parent=gene-NM058_16735;Dbxref=NCBI_GP:UTX04634.1;Name=UTX04634.1;gbkey=CDS;gene=bcaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388827.1;locus_tag=NM058_16735;product=branched-chain amino acid transporter BcaP;protein_id=UTX04634.1;transl_table=11 CP101611.1 Genbank pseudogene 3200564 3201434 . - . ID=gene-NM058_16740;Name=NM058_16740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16740;pseudo=true CP101611.1 Protein Homology CDS 3200564 3201434 . - 0 ID=cds-NM058_16740;Parent=gene-NM058_16740;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388826.1;locus_tag=NM058_16740;product=SDR family oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3201508 3202607 . - . ID=gene-NM058_16745;Name=citA;gbkey=Gene;gene=citA;gene_biotype=pseudogene;locus_tag=NM058_16745;pseudo=true CP101611.1 Protein Homology CDS 3201508 3202607 . - 0 ID=cds-NM058_16745;Parent=gene-NM058_16745;Note=frameshifted;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388825.2;locus_tag=NM058_16745;product=citrate synthase CitA;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3202716 3203589 . + . ID=gene-NM058_16750;Name=citR;gbkey=Gene;gene=citR;gene_biotype=pseudogene;locus_tag=NM058_16750;pseudo=true CP101611.1 Protein Homology CDS 3202716 3203589 . + 0 ID=cds-NM058_16750;Parent=gene-NM058_16750;Note=frameshifted;gbkey=CDS;gene=citR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388824.2;locus_tag=NM058_16750;product=transcriptional regulator CitR;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3203660 3204671 . - . ID=gene-NM058_16755;Name=NM058_16755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16755;pseudo=true CP101611.1 Protein Homology CDS 3203660 3204671 . - 0 ID=cds-NM058_16755;Parent=gene-NM058_16755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388823.2;locus_tag=NM058_16755;product=LysM peptidoglycan-binding domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3205212 3206588 . + . ID=gene-NM058_16760;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=NM058_16760 CP101611.1 Protein Homology CDS 3205212 3206588 . + 0 ID=cds-UTX04635.1;Parent=gene-NM058_16760;Dbxref=NCBI_GP:UTX04635.1;Name=UTX04635.1;gbkey=CDS;gene=phoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003239571.1;locus_tag=NM058_16760;product=alkaline phosphatase PhoA;protein_id=UTX04635.1;transl_table=11 CP101611.1 Genbank gene 3206621 3208027 . - . ID=gene-NM058_16765;Name=spoVR;gbkey=Gene;gene=spoVR;gene_biotype=protein_coding;locus_tag=NM058_16765 CP101611.1 Protein Homology CDS 3206621 3208027 . - 0 ID=cds-UTX04636.1;Parent=gene-NM058_16765;Dbxref=NCBI_GP:UTX04636.1;Name=UTX04636.1;gbkey=CDS;gene=spoVR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388821.1;locus_tag=NM058_16765;product=stage V sporulation protein SpoVR;protein_id=UTX04636.1;transl_table=11 CP101611.1 Genbank pseudogene 3208082 3209719 . + . ID=gene-NM058_16770;Name=NM058_16770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16770;pseudo=true CP101611.1 Protein Homology CDS 3208082 3209719 . + 0 ID=cds-NM058_16770;Parent=gene-NM058_16770;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0008381;gbkey=CDS;go_function=mechanosensitive ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388820.1;locus_tag=NM058_16770;product=mechanosensitive ion channel;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3209834 3210274 . + . ID=gene-NM058_16775;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=NM058_16775 CP101611.1 Protein Homology CDS 3209834 3210274 . + 0 ID=cds-UTX04637.1;Parent=gene-NM058_16775;Dbxref=NCBI_GP:UTX04637.1;Name=UTX04637.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388819.1;locus_tag=NM058_16775;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=UTX04637.1;transl_table=11 CP101611.1 Genbank gene 3210426 3211868 . + . ID=gene-NM058_16780;Name=NM058_16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16780 CP101611.1 Protein Homology CDS 3210426 3211868 . + 0 ID=cds-UTX04638.1;Parent=gene-NM058_16780;Dbxref=NCBI_GP:UTX04638.1;Name=UTX04638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388818.2;locus_tag=NM058_16780;product=LysM peptidoglycan-binding domain-containing protein;protein_id=UTX04638.1;transl_table=11 CP101611.1 Genbank gene 3211910 3212233 . - . ID=gene-NM058_16785;Name=NM058_16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16785 CP101611.1 Protein Homology CDS 3211910 3212233 . - 0 ID=cds-UTX04639.1;Parent=gene-NM058_16785;Dbxref=NCBI_GP:UTX04639.1;Name=UTX04639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388817.1;locus_tag=NM058_16785;product=YqzG/YhdC family protein;protein_id=UTX04639.1;transl_table=11 CP101611.1 Genbank gene 3212434 3212676 . + . ID=gene-NM058_16790;Name=NM058_16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16790 CP101611.1 Protein Homology CDS 3212434 3212676 . + 0 ID=cds-UTX04640.1;Parent=gene-NM058_16790;Dbxref=NCBI_GP:UTX04640.1;Name=UTX04640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388816.1;locus_tag=NM058_16790;product=YhdB family protein;protein_id=UTX04640.1;transl_table=11 CP101611.1 Genbank pseudogene 3212691 3213214 . - . ID=gene-NM058_16795;Name=NM058_16795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16795;pseudo=true CP101611.1 Protein Homology CDS 3212691 3213214 . - 0 ID=cds-NM058_16795;Parent=gene-NM058_16795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388815.1;locus_tag=NM058_16795;product=NAD(P)H-dependent oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3213211 3213858 . - . ID=gene-NM058_16800;Name=NM058_16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16800 CP101611.1 Protein Homology CDS 3213211 3213858 . - 0 ID=cds-UTX04641.1;Parent=gene-NM058_16800;Dbxref=NCBI_GP:UTX04641.1;Name=UTX04641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388814.1;locus_tag=NM058_16800;product=response regulator transcription factor;protein_id=UTX04641.1;transl_table=11 CP101611.1 Genbank gene 3213855 3214997 . - . ID=gene-NM058_16805;Name=NM058_16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16805 CP101611.1 Protein Homology CDS 3213855 3214997 . - 0 ID=cds-UTX04642.1;Parent=gene-NM058_16805;Dbxref=NCBI_GP:UTX04642.1;Name=UTX04642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019713772.1;locus_tag=NM058_16805;product=GAF domain-containing sensor histidine kinase;protein_id=UTX04642.1;transl_table=11 CP101611.1 Genbank pseudogene 3215146 3216890 . - . ID=gene-NM058_16810;Name=pgcA;gbkey=Gene;gene=pgcA;gene_biotype=pseudogene;locus_tag=NM058_16810;pseudo=true CP101611.1 Protein Homology CDS 3215146 3216890 . - 0 ID=cds-NM058_16810;Parent=gene-NM058_16810;Note=frameshifted;gbkey=CDS;gene=pgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388812.2;locus_tag=NM058_16810;product=phosphoglucomutase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3217022 3218689 . - . ID=gene-NM058_16815;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=NM058_16815 CP101611.1 Protein Homology CDS 3217022 3218689 . - 0 ID=cds-UTX07077.1;Parent=gene-NM058_16815;Dbxref=NCBI_GP:UTX07077.1;Name=UTX07077.1;gbkey=CDS;gene=glpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388811.2;locus_tag=NM058_16815;product=glycerol-3-phosphate dehydrogenase;protein_id=UTX07077.1;transl_table=11 CP101611.1 Genbank gene 3218830 3220320 . - . ID=gene-NM058_16820;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=NM058_16820 CP101611.1 Protein Homology CDS 3218830 3220320 . - 0 ID=cds-UTX04643.1;Parent=gene-NM058_16820;Dbxref=NCBI_GP:UTX04643.1;Name=UTX04643.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388810.2;locus_tag=NM058_16820;product=glycerol kinase GlpK;protein_id=UTX04643.1;transl_table=11 CP101611.1 Genbank gene 3220339 3221163 . - . ID=gene-NM058_16825;Name=glpF;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;locus_tag=NM058_16825 CP101611.1 Protein Homology CDS 3220339 3221163 . - 0 ID=cds-UTX04644.1;Parent=gene-NM058_16825;Dbxref=NCBI_GP:UTX04644.1;Name=UTX04644.1;gbkey=CDS;gene=glpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388809.1;locus_tag=NM058_16825;product=glycerol uptake facilitator protein GlpF;protein_id=UTX04644.1;transl_table=11 CP101611.1 Genbank gene 3221341 3221916 . - . ID=gene-NM058_16830;Name=glpP;gbkey=Gene;gene=glpP;gene_biotype=protein_coding;locus_tag=NM058_16830 CP101611.1 Protein Homology CDS 3221341 3221916 . - 0 ID=cds-UTX04645.1;Parent=gene-NM058_16830;Dbxref=NCBI_GP:UTX04645.1;Name=UTX04645.1;gbkey=CDS;gene=glpP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010327771.1;locus_tag=NM058_16830;product=glycerol uptake operon antiterminator GlpP;protein_id=UTX04645.1;transl_table=11 CP101611.1 Genbank gene 3221947 3223299 . - . ID=gene-NM058_16835;Name=NM058_16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16835 CP101611.1 Protein Homology CDS 3221947 3223299 . - 0 ID=cds-UTX07078.1;Parent=gene-NM058_16835;Dbxref=NCBI_GP:UTX07078.1;Name=UTX07078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388807.2;locus_tag=NM058_16835;product=aspartate aminotransferase family protein;protein_id=UTX07078.1;transl_table=11 CP101611.1 Genbank gene 3223444 3224358 . - . ID=gene-NM058_16840;Name=NM058_16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16840 CP101611.1 Protein Homology CDS 3223444 3224358 . - 0 ID=cds-UTX04646.1;Parent=gene-NM058_16840;Dbxref=NCBI_GP:UTX04646.1;Name=UTX04646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257890.1;locus_tag=NM058_16840;product=AEC family transporter;protein_id=UTX04646.1;transl_table=11 CP101611.1 Genbank gene 3224466 3226007 . - . ID=gene-NM058_16845;Name=NM058_16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16845 CP101611.1 Protein Homology CDS 3224466 3226007 . - 0 ID=cds-UTX04647.1;Parent=gene-NM058_16845;Dbxref=NCBI_GP:UTX04647.1;Name=UTX04647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388806.2;locus_tag=NM058_16845;product=bifunctional GNAT family N-acetyltransferase/carbon-nitrogen hydrolase family protein;protein_id=UTX04647.1;transl_table=11 CP101611.1 Genbank gene 3226023 3226685 . - . ID=gene-NM058_16850;Name=NM058_16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16850 CP101611.1 Protein Homology CDS 3226023 3226685 . - 0 ID=cds-UTX04648.1;Parent=gene-NM058_16850;Dbxref=NCBI_GP:UTX04648.1;Name=UTX04648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388805.1;locus_tag=NM058_16850;product=HAD family hydrolase;protein_id=UTX04648.1;transl_table=11 CP101611.1 Genbank gene 3226811 3227233 . - . ID=gene-NM058_16855;Name=NM058_16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16855 CP101611.1 Protein Homology CDS 3226811 3227233 . - 0 ID=cds-UTX04649.1;Parent=gene-NM058_16855;Dbxref=NCBI_GP:UTX04649.1;Name=UTX04649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388804.1;locus_tag=NM058_16855;product=CBS domain-containing protein;protein_id=UTX04649.1;transl_table=11 CP101611.1 Genbank gene 3227371 3227766 . - . ID=gene-NM058_16860;Name=NM058_16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16860 CP101611.1 Protein Homology CDS 3227371 3227766 . - 0 ID=cds-UTX04650.1;Parent=gene-NM058_16860;Dbxref=NCBI_GP:UTX04650.1;Name=UTX04650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388803.2;locus_tag=NM058_16860;product=YhcU family protein;protein_id=UTX04650.1;transl_table=11 CP101611.1 Genbank gene 3227877 3228785 . + . ID=gene-NM058_16865;Name=NM058_16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16865 CP101611.1 Protein Homology CDS 3227877 3228785 . + 0 ID=cds-UTX04651.1;Parent=gene-NM058_16865;Dbxref=NCBI_GP:UTX04651.1;Name=UTX04651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388802.2;locus_tag=NM058_16865;product=RluA family pseudouridine synthase;protein_id=UTX04651.1;transl_table=11 CP101611.1 Genbank gene 3228816 3229412 . - . ID=gene-NM058_16870;Name=srtA;gbkey=Gene;gene=srtA;gene_biotype=protein_coding;locus_tag=NM058_16870 CP101611.1 Protein Homology CDS 3228816 3229412 . - 0 ID=cds-UTX04652.1;Parent=gene-NM058_16870;Dbxref=NCBI_GP:UTX04652.1;Name=UTX04652.1;Ontology_term=GO:0008234;gbkey=CDS;gene=srtA;go_function=cysteine-type peptidase activity|0008234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388801.1;locus_tag=NM058_16870;product=sortase SrtA;protein_id=UTX04652.1;transl_table=11 CP101611.1 Genbank gene 3229409 3233017 . - . ID=gene-NM058_16875;Name=NM058_16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16875 CP101611.1 Protein Homology CDS 3229409 3233017 . - 0 ID=cds-UTX07079.1;Parent=gene-NM058_16875;Dbxref=NCBI_GP:UTX07079.1;Name=UTX07079.1;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388800.1;locus_tag=NM058_16875;product=5'-nucleotidase C-terminal domain-containing protein;protein_id=UTX07079.1;transl_table=11 CP101611.1 Genbank gene 3233141 3233791 . + . ID=gene-NM058_16880;Name=NM058_16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16880 CP101611.1 Protein Homology CDS 3233141 3233791 . + 0 ID=cds-UTX04653.1;Parent=gene-NM058_16880;Dbxref=NCBI_GP:UTX04653.1;Name=UTX04653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388799.1;locus_tag=NM058_16880;product=spore coat protein;protein_id=UTX04653.1;transl_table=11 CP101611.1 Genbank gene 3233723 3234691 . - . ID=gene-NM058_16885;Name=NM058_16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16885 CP101611.1 Protein Homology CDS 3233723 3234691 . - 0 ID=cds-UTX04654.1;Parent=gene-NM058_16885;Dbxref=NCBI_GP:UTX04654.1;Name=UTX04654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388797.2;locus_tag=NM058_16885;product=hypothetical protein;protein_id=UTX04654.1;transl_table=11 CP101611.1 Genbank gene 3234811 3235395 . - . ID=gene-NM058_16890;Name=NM058_16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16890 CP101611.1 Protein Homology CDS 3234811 3235395 . - 0 ID=cds-UTX04655.1;Parent=gene-NM058_16890;Dbxref=NCBI_GP:UTX04655.1;Name=UTX04655.1;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388796.2;locus_tag=NM058_16890;product=YhcN/YlaJ family sporulation lipoprotein;protein_id=UTX04655.1;transl_table=11 CP101611.1 Genbank gene 3235545 3235985 . + . ID=gene-NM058_16895;Name=NM058_16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16895 CP101611.1 Protein Homology CDS 3235545 3235985 . + 0 ID=cds-UTX04656.1;Parent=gene-NM058_16895;Dbxref=NCBI_GP:UTX04656.1;Name=UTX04656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388795.1;locus_tag=NM058_16895;product=hypothetical protein;protein_id=UTX04656.1;transl_table=11 CP101611.1 Genbank pseudogene 3236488 3237275 . - . ID=gene-NM058_16900;Name=NM058_16900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16900;pseudo=true CP101611.1 Protein Homology CDS 3236488 3237275 . - 0 ID=cds-NM058_16900;Parent=gene-NM058_16900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257879.1;locus_tag=NM058_16900;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3237526 3237659 . + . ID=gene-NM058_16905;Name=NM058_16905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16905;pseudo=true CP101611.1 Protein Homology CDS 3237526 3237659 . + 0 ID=cds-NM058_16905;Parent=gene-NM058_16905;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388378.1;locus_tag=NM058_16905;product=endopeptidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3237846 3238367 . - . ID=gene-NM058_16910;Name=satA;gbkey=Gene;gene=satA;gene_biotype=protein_coding;locus_tag=NM058_16910 CP101611.1 Protein Homology CDS 3237846 3238367 . - 0 ID=cds-UTX04657.1;Parent=gene-NM058_16910;Dbxref=NCBI_GP:UTX04657.1;Name=UTX04657.1;gbkey=CDS;gene=satA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_391954.1;locus_tag=NM058_16910;product=streptothricin N-acetyltransferase SatA;protein_id=UTX04657.1;transl_table=11 CP101611.1 Genbank pseudogene 3238635 3240024 . - . ID=gene-NM058_16915;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=pseudogene;locus_tag=NM058_16915;pseudo=true CP101611.1 Protein Homology CDS 3238635 3240024 . - 0 ID=cds-NM058_16915;Parent=gene-NM058_16915;Note=frameshifted;Ontology_term=GO:0015811,GO:0015184;gbkey=CDS;gene=tcyP;go_function=L-cystine transmembrane transporter activity|0015184||IEA;go_process=L-cystine transport|0015811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388794.1;locus_tag=NM058_16915;product=L-cystine transporter TcyP;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3240196 3241269 . + . ID=gene-NM058_16920;Name=NM058_16920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16920;pseudo=true CP101611.1 Protein Homology CDS 3240196 3241269 . + 0 ID=cds-NM058_16920;Parent=gene-NM058_16920;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388793.1;locus_tag=NM058_16920;product=diguanylate cyclase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3241277 3242107 . - . ID=gene-NM058_16925;Name=NM058_16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16925 CP101611.1 Protein Homology CDS 3241277 3242107 . - 0 ID=cds-UTX04658.1;Parent=gene-NM058_16925;Dbxref=NCBI_GP:UTX04658.1;Name=UTX04658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388792.2;locus_tag=NM058_16925;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=UTX04658.1;transl_table=11 CP101611.1 Genbank gene 3242545 3242748 . + . ID=gene-NM058_16930;Name=cspB;gbkey=Gene;gene=cspB;gene_biotype=protein_coding;locus_tag=NM058_16930 CP101611.1 Protein Homology CDS 3242545 3242748 . + 0 ID=cds-UTX04659.1;Parent=gene-NM058_16930;Dbxref=NCBI_GP:UTX04659.1;Name=UTX04659.1;gbkey=CDS;gene=cspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388791.1;locus_tag=NM058_16930;product=cold shock-like protein CspB;protein_id=UTX04659.1;transl_table=11 CP101611.1 Genbank gene 3242840 3243781 . - . ID=gene-NM058_16935;Name=NM058_16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16935 CP101611.1 Protein Homology CDS 3242840 3243781 . - 0 ID=cds-UTX04660.1;Parent=gene-NM058_16935;Dbxref=NCBI_GP:UTX04660.1;Name=UTX04660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388790.1;locus_tag=NM058_16935;product=ABC transporter permease;protein_id=UTX04660.1;transl_table=11 CP101611.1 Genbank gene 3243774 3244691 . - . ID=gene-NM058_16940;Name=NM058_16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16940 CP101611.1 Protein Homology CDS 3243774 3244691 . - 0 ID=cds-UTX07080.1;Parent=gene-NM058_16940;Dbxref=NCBI_GP:UTX07080.1;Name=UTX07080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388789.1;locus_tag=NM058_16940;product=ABC transporter ATP-binding protein;protein_id=UTX07080.1;transl_table=11 CP101611.1 Genbank pseudogene 3244708 3245405 . - . ID=gene-NM058_16945;Name=NM058_16945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16945;pseudo=true CP101611.1 Protein Homology CDS 3244708 3245405 . - 0 ID=cds-NM058_16945;Parent=gene-NM058_16945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388788.1;locus_tag=NM058_16945;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3245407 3245772 . - . ID=gene-NM058_16950;Name=NM058_16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16950 CP101611.1 Protein Homology CDS 3245407 3245772 . - 0 ID=cds-UTX04661.1;Parent=gene-NM058_16950;Dbxref=NCBI_GP:UTX04661.1;Name=UTX04661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388787.1;locus_tag=NM058_16950;product=GntR family transcriptional regulator;protein_id=UTX04661.1;transl_table=11 CP101611.1 Genbank gene 3245775 3246536 . - . ID=gene-NM058_16955;Name=NM058_16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16955 CP101611.1 Protein Homology CDS 3245775 3246536 . - 0 ID=cds-UTX04662.1;Parent=gene-NM058_16955;Dbxref=NCBI_GP:UTX04662.1;Name=UTX04662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388786.1;locus_tag=NM058_16955;product=hypothetical protein;protein_id=UTX04662.1;transl_table=11 CP101611.1 Genbank gene 3246704 3247078 . - . ID=gene-NM058_16960;Name=NM058_16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16960 CP101611.1 Protein Homology CDS 3246704 3247078 . - 0 ID=cds-UTX04663.1;Parent=gene-NM058_16960;Dbxref=NCBI_GP:UTX04663.1;Name=UTX04663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388784.1;locus_tag=NM058_16960;product=hypothetical protein;protein_id=UTX04663.1;transl_table=11 CP101611.1 Genbank gene 3247091 3247621 . - . ID=gene-NM058_16965;Name=NM058_16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16965 CP101611.1 Protein Homology CDS 3247091 3247621 . - 0 ID=cds-UTX04664.1;Parent=gene-NM058_16965;Dbxref=NCBI_GP:UTX04664.1;Name=UTX04664.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388783.1;locus_tag=NM058_16965;product=NAD(P)H-dependent oxidoreductase;protein_id=UTX04664.1;transl_table=11 CP101611.1 Genbank pseudogene 3247644 3249247 . - . ID=gene-NM058_16970;Name=NM058_16970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_16970;pseudo=true CP101611.1 Protein Homology CDS 3247644 3249247 . - 0 ID=cds-NM058_16970;Parent=gene-NM058_16970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388782.1;locus_tag=NM058_16970;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3249288 3249953 . - . ID=gene-NM058_16975;Name=NM058_16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16975 CP101611.1 Protein Homology CDS 3249288 3249953 . - 0 ID=cds-UTX04665.1;Parent=gene-NM058_16975;Dbxref=NCBI_GP:UTX04665.1;Name=UTX04665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388781.1;locus_tag=NM058_16975;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=UTX04665.1;transl_table=11 CP101611.1 Genbank gene 3249989 3250453 . - . ID=gene-NM058_16980;Name=NM058_16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16980 CP101611.1 Protein Homology CDS 3249989 3250453 . - 0 ID=cds-UTX04666.1;Parent=gene-NM058_16980;Dbxref=NCBI_GP:UTX04666.1;Name=UTX04666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388780.1;locus_tag=NM058_16980;product=MarR family transcriptional regulator;protein_id=UTX04666.1;transl_table=11 CP101611.1 Genbank gene 3250612 3251790 . - . ID=gene-NM058_16985;Name=yhbH;gbkey=Gene;gene=yhbH;gene_biotype=protein_coding;locus_tag=NM058_16985 CP101611.1 Protein Homology CDS 3250612 3251790 . - 0 ID=cds-UTX04667.1;Parent=gene-NM058_16985;Dbxref=NCBI_GP:UTX04667.1;Name=UTX04667.1;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=yhbH;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388779.1;locus_tag=NM058_16985;product=sporulation protein YhbH;protein_id=UTX04667.1;transl_table=11 CP101611.1 Genbank gene 3251969 3253864 . - . ID=gene-NM058_16990;Name=prkA;gbkey=Gene;gene=prkA;gene_biotype=protein_coding;locus_tag=NM058_16990 CP101611.1 Protein Homology CDS 3251969 3253864 . - 0 ID=cds-UTX04668.1;Parent=gene-NM058_16990;Dbxref=NCBI_GP:UTX04668.1;Name=UTX04668.1;gbkey=CDS;gene=prkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388778.1;locus_tag=NM058_16990;product=serine/threonine protein kinase PrkA;protein_id=UTX04668.1;transl_table=11 CP101611.1 Genbank gene 3254215 3254922 . - . ID=gene-NM058_16995;Name=NM058_16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_16995 CP101611.1 Protein Homology CDS 3254215 3254922 . - 0 ID=cds-UTX04669.1;Parent=gene-NM058_16995;Dbxref=NCBI_GP:UTX04669.1;Name=UTX04669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388777.2;locus_tag=NM058_16995;product=hypothetical protein;protein_id=UTX04669.1;transl_table=11 CP101611.1 Genbank gene 3254934 3255647 . - . ID=gene-NM058_17000;Name=NM058_17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17000 CP101611.1 Protein Homology CDS 3254934 3255647 . - 0 ID=cds-UTX04670.1;Parent=gene-NM058_17000;Dbxref=NCBI_GP:UTX04670.1;Name=UTX04670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388776.1;locus_tag=NM058_17000;product=polymer-forming cytoskeletal protein;protein_id=UTX04670.1;transl_table=11 CP101611.1 Genbank pseudogene 3255638 3256278 . - . ID=gene-NM058_17005;Name=NM058_17005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17005;pseudo=true CP101611.1 Protein Homology CDS 3255638 3256278 . - 0 ID=cds-NM058_17005;Parent=gene-NM058_17005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003245603.1;locus_tag=NM058_17005;product=YhbD family protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3256405 3256886 . - . ID=gene-NM058_17010;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=pseudogene;locus_tag=NM058_17010;pseudo=true CP101611.1 Protein Homology CDS 3256405 3256886 . - 0 ID=cds-NM058_17010;Parent=gene-NM058_17010;Note=frameshifted;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388774.2;locus_tag=NM058_17010;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3256924 3257853 . - . ID=gene-NM058_17015;Name=NM058_17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17015 CP101611.1 Protein Homology CDS 3256924 3257853 . - 0 ID=cds-UTX04671.1;Parent=gene-NM058_17015;Dbxref=NCBI_GP:UTX04671.1;Name=UTX04671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388773.1;locus_tag=NM058_17015;product=amidase domain-containing protein;protein_id=UTX04671.1;transl_table=11 CP101611.1 Genbank gene 3257919 3259079 . - . ID=gene-NM058_17020;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=NM058_17020 CP101611.1 Protein Homology CDS 3257919 3259079 . - 0 ID=cds-UTX04672.1;Parent=gene-NM058_17020;Dbxref=NCBI_GP:UTX04672.1;Name=UTX04672.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388772.2;locus_tag=NM058_17020;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=UTX04672.1;transl_table=11 CP101611.1 Genbank gene 3259162 3259785 . + . ID=gene-NM058_17025;Name=NM058_17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17025 CP101611.1 Protein Homology CDS 3259162 3259785 . + 0 ID=cds-UTX04673.1;Parent=gene-NM058_17025;Dbxref=NCBI_GP:UTX04673.1;Name=UTX04673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388771.1;locus_tag=NM058_17025;product=B3/4 domain-containing protein;protein_id=UTX04673.1;transl_table=11 CP101611.1 Genbank gene 3259876 3259949 . - . ID=gene-NM058_17030;Name=NM058_17030;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_17030 CP101611.1 tRNAscan-SE tRNA 3259876 3259949 . - . ID=rna-NM058_17030;Parent=gene-NM058_17030;anticodon=(pos:complement(3259915..3259917));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17030;product=tRNA-Gly CP101611.1 tRNAscan-SE exon 3259876 3259949 . - . ID=exon-NM058_17030-1;Parent=rna-NM058_17030;anticodon=(pos:complement(3259915..3259917));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17030;product=tRNA-Gly CP101611.1 Genbank pseudogene 3260143 3260342 . + . ID=gene-NM058_17035;Name=NM058_17035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17035;pseudo=true CP101611.1 Protein Homology CDS 3260143 3260342 . + 0 ID=cds-NM058_17035;Parent=gene-NM058_17035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097697.1;locus_tag=NM058_17035;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3260344 3260799 . + . ID=gene-NM058_17040;Name=NM058_17040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17040;pseudo=true CP101611.1 Protein Homology CDS 3260344 3260799 . + 0 ID=cds-NM058_17040;Parent=gene-NM058_17040;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388769.1;locus_tag=NM058_17040;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3260833 3261102 . - . ID=gene-NM058_17045;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=NM058_17045 CP101611.1 Protein Homology CDS 3260833 3261102 . - 0 ID=cds-UTX04674.1;Parent=gene-NM058_17045;Dbxref=NCBI_GP:UTX04674.1;Name=UTX04674.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388768.1;locus_tag=NM058_17045;product=30S ribosomal protein S14;protein_id=UTX04674.1;transl_table=11 CP101611.1 Genbank pseudogene 3261258 3261472 . - . ID=gene-NM058_17050;Name=NM058_17050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17050;pseudo=true CP101611.1 Protein Homology CDS 3261258 3261472 . - 0 ID=cds-NM058_17050;Parent=gene-NM058_17050;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388767.1;locus_tag=NM058_17050;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3261593 3262728 . - . ID=gene-NM058_17055;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=pseudogene;locus_tag=NM058_17055;pseudo=true CP101611.1 Protein Homology CDS 3261593 3262728 . - 0 ID=cds-NM058_17055;Parent=gene-NM058_17055;Note=frameshifted;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016938445.1;locus_tag=NM058_17055;product=FMNH2-dependent alkanesulfonate monooxygenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3262751 3263581 . - . ID=gene-NM058_17060;Name=NM058_17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17060 CP101611.1 Protein Homology CDS 3262751 3263581 . - 0 ID=cds-UTX04675.1;Parent=gene-NM058_17060;Dbxref=NCBI_GP:UTX04675.1;Name=UTX04675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388765.1;locus_tag=NM058_17060;product=ABC transporter permease;protein_id=UTX04675.1;transl_table=11 CP101611.1 Genbank gene 3263578 3264576 . - . ID=gene-NM058_17065;Name=NM058_17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17065 CP101611.1 Protein Homology CDS 3263578 3264576 . - 0 ID=cds-UTX04676.1;Parent=gene-NM058_17065;Dbxref=NCBI_GP:UTX04676.1;Name=UTX04676.1;Ontology_term=GO:0042918,GO:0005488,GO:0042626,GO:0009897,GO:0030288,GO:0043190;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=binding|0005488||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=alkanesulfonate transport|0042918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388764.1;locus_tag=NM058_17065;product=aliphatic sulfonate ABC transporter substrate-binding protein;protein_id=UTX04676.1;transl_table=11 CP101611.1 Genbank gene 3264594 3265361 . - . ID=gene-NM058_17070;Name=NM058_17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17070 CP101611.1 Protein Homology CDS 3264594 3265361 . - 0 ID=cds-UTX04677.1;Parent=gene-NM058_17070;Dbxref=NCBI_GP:UTX04677.1;Name=UTX04677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388763.3;locus_tag=NM058_17070;product=ABC transporter ATP-binding protein;protein_id=UTX04677.1;transl_table=11 CP101611.1 Genbank gene 3265772 3267223 . + . ID=gene-NM058_17075;Name=katA;gbkey=Gene;gene=katA;gene_biotype=protein_coding;locus_tag=NM058_17075 CP101611.1 Protein Homology CDS 3265772 3267223 . + 0 ID=cds-UTX04678.1;Parent=gene-NM058_17075;Dbxref=NCBI_GP:UTX04678.1;Name=UTX04678.1;gbkey=CDS;gene=katA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388762.2;locus_tag=NM058_17075;product=catalase KatA;protein_id=UTX04678.1;transl_table=11 CP101611.1 Genbank pseudogene 3267251 3267446 . - . ID=gene-NM058_17080;Name=NM058_17080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17080;pseudo=true CP101611.1 Protein Homology CDS 3267251 3267446 . - 0 ID=cds-NM058_17080;Parent=gene-NM058_17080;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388761.2;locus_tag=NM058_17080;product=FbpB family small basic protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3267579 3269351 . - . ID=gene-NM058_17085;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=NM058_17085 CP101611.1 Protein Homology CDS 3267579 3269351 . - 0 ID=cds-UTX04679.1;Parent=gene-NM058_17085;Dbxref=NCBI_GP:UTX04679.1;Name=UTX04679.1;gbkey=CDS;gene=thiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388759.2;locus_tag=NM058_17085;product=phosphomethylpyrimidine synthase ThiC;protein_id=UTX04679.1;transl_table=11 CP101611.1 cmsearch riboswitch 3269483 3269590 . - . ID=id-CP101611.1:3269483..3269590;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 3269658 3270350 . - . ID=gene-NM058_17090;Name=NM058_17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17090 CP101611.1 Protein Homology CDS 3269658 3270350 . - 0 ID=cds-UTX07081.1;Parent=gene-NM058_17090;Dbxref=NCBI_GP:UTX07081.1;Name=UTX07081.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388758.2;locus_tag=NM058_17090;product=Type 1 glutamine amidotransferase-like domain-containing protein;protein_id=UTX07081.1;transl_table=11 CP101611.1 Genbank gene 3270465 3270728 . + . ID=gene-NM058_17095;Name=NM058_17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17095 CP101611.1 Protein Homology CDS 3270465 3270728 . + 0 ID=cds-UTX04680.1;Parent=gene-NM058_17095;Dbxref=NCBI_GP:UTX04680.1;Name=UTX04680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019713728.1;locus_tag=NM058_17095;product=spore coat protein;protein_id=UTX04680.1;transl_table=11 CP101611.1 Genbank gene 3270782 3270985 . - . ID=gene-NM058_17100;Name=NM058_17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17100 CP101611.1 Protein Homology CDS 3270782 3270985 . - 0 ID=cds-UTX07082.1;Parent=gene-NM058_17100;Dbxref=NCBI_GP:UTX07082.1;Name=UTX07082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388757.2;locus_tag=NM058_17100;product=hypothetical protein;protein_id=UTX07082.1;transl_table=11 CP101611.1 Genbank gene 3271125 3271901 . + . ID=gene-NM058_17105;Name=spo0M;gbkey=Gene;gene=spo0M;gene_biotype=protein_coding;locus_tag=NM058_17105 CP101611.1 Protein Homology CDS 3271125 3271901 . + 0 ID=cds-UTX04681.1;Parent=gene-NM058_17105;Dbxref=NCBI_GP:UTX04681.1;Name=UTX04681.1;gbkey=CDS;gene=spo0M;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388756.2;locus_tag=NM058_17105;product=sporulation control protein Spo0M;protein_id=UTX04681.1;transl_table=11 CP101611.1 Genbank gene 3272796 3273617 . - . ID=gene-NM058_17110;Name=NM058_17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17110 CP101611.1 Protein Homology CDS 3272796 3273617 . - 0 ID=cds-UTX04682.1;Parent=gene-NM058_17110;Dbxref=NCBI_GP:UTX04682.1;Name=UTX04682.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002106884.1;locus_tag=NM058_17110;product=methyltransferase domain-containing protein;protein_id=UTX04682.1;transl_table=11 CP101611.1 Genbank gene 3273739 3275139 . - . ID=gene-NM058_17115;Name=NM058_17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17115 CP101611.1 Protein Homology CDS 3273739 3275139 . - 0 ID=cds-UTX04683.1;Parent=gene-NM058_17115;Dbxref=NCBI_GP:UTX04683.1;Name=UTX04683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019713724.1;locus_tag=NM058_17115;product=MATE family efflux transporter;protein_id=UTX04683.1;transl_table=11 CP101611.1 Genbank gene 3275165 3276601 . - . ID=gene-NM058_17120;Name=NM058_17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17120 CP101611.1 Protein Homology CDS 3275165 3276601 . - 0 ID=cds-UTX04684.1;Parent=gene-NM058_17120;Dbxref=NCBI_GP:UTX04684.1;Name=UTX04684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017474792.1;locus_tag=NM058_17120;product=DUF6179 domain-containing protein;protein_id=UTX04684.1;transl_table=11 CP101611.1 Genbank gene 3276604 3277071 . - . ID=gene-NM058_17125;Name=NM058_17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17125 CP101611.1 Protein Homology CDS 3276604 3277071 . - 0 ID=cds-UTX04685.1;Parent=gene-NM058_17125;Dbxref=NCBI_GP:UTX04685.1;Name=UTX04685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003182152.1;locus_tag=NM058_17125;product=DUF6323 family protein;protein_id=UTX04685.1;transl_table=11 CP101611.1 Genbank gene 3277347 3278497 . + . ID=gene-NM058_17130;Name=NM058_17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17130 CP101611.1 Protein Homology CDS 3277347 3277620 . + 0 ID=cds-UTX04686.1;Parent=gene-NM058_17130;Dbxref=NCBI_GP:UTX04686.1;Name=UTX04686.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611387.1;locus_tag=NM058_17130;product=IS3 family transposase;protein_id=UTX04686.1;transl_table=11 CP101611.1 Protein Homology CDS 3277620 3278497 . + 2 ID=cds-UTX04686.1;Parent=gene-NM058_17130;Dbxref=NCBI_GP:UTX04686.1;Name=UTX04686.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611387.1;locus_tag=NM058_17130;product=IS3 family transposase;protein_id=UTX04686.1;transl_table=11 CP101611.1 Genbank gene 3278571 3279773 . - . ID=gene-NM058_17135;Name=NM058_17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17135 CP101611.1 Protein Homology CDS 3278571 3279773 . - 0 ID=cds-UTX04687.1;Parent=gene-NM058_17135;Dbxref=NCBI_GP:UTX04687.1;Name=UTX04687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019713721.1;locus_tag=NM058_17135;product=glycosyl transferase;protein_id=UTX04687.1;transl_table=11 CP101611.1 Genbank gene 3279831 3280670 . - . ID=gene-NM058_17140;Name=NM058_17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17140 CP101611.1 Protein Homology CDS 3279831 3280670 . - 0 ID=cds-UTX07083.1;Parent=gene-NM058_17140;Dbxref=NCBI_GP:UTX07083.1;Name=UTX07083.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013429.2;locus_tag=NM058_17140;product=sugar phosphate isomerase/epimerase;protein_id=UTX07083.1;transl_table=11 CP101611.1 Genbank gene 3280699 3281631 . - . ID=gene-NM058_17145;Name=NM058_17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17145 CP101611.1 Protein Homology CDS 3280699 3281631 . - 0 ID=cds-UTX07084.1;Parent=gene-NM058_17145;Dbxref=NCBI_GP:UTX07084.1;Name=UTX07084.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013166.2;locus_tag=NM058_17145;product=alpha/beta fold hydrolase;protein_id=UTX07084.1;transl_table=11 CP101611.1 Genbank pseudogene 3281662 3282359 . - . ID=gene-NM058_17150;Name=NM058_17150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17150;pseudo=true CP101611.1 Protein Homology CDS 3281662 3282359 . - 0 ID=cds-NM058_17150;Parent=gene-NM058_17150;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006633,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015715915.1;locus_tag=NM058_17150;product=polyketide synthase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3282528 3283220 . - . ID=gene-NM058_17155;Name=NM058_17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17155 CP101611.1 Protein Homology CDS 3282528 3283220 . - 0 ID=cds-UTX07085.1;Parent=gene-NM058_17155;Dbxref=NCBI_GP:UTX07085.1;Name=UTX07085.1;Ontology_term=GO:0006633,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016821481.1;locus_tag=NM058_17155;product=polyketide synthase;protein_id=UTX07085.1;transl_table=11 CP101611.1 Genbank gene 3283301 3284062 . - . ID=gene-NM058_17160;Name=NM058_17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17160 CP101611.1 Protein Homology CDS 3283301 3284062 . - 0 ID=cds-UTX04688.1;Parent=gene-NM058_17160;Dbxref=NCBI_GP:UTX04688.1;Name=UTX04688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019713717.1;locus_tag=NM058_17160;product=enoyl-CoA hydratase/isomerase;protein_id=UTX04688.1;transl_table=11 CP101611.1 Genbank pseudogene 3284062 3285320 . - . ID=gene-NM058_17165;Name=NM058_17165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17165;pseudo=true CP101611.1 Protein Homology CDS 3284062 3285320 . - 0 ID=cds-NM058_17165;Parent=gene-NM058_17165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019713716.1;locus_tag=NM058_17165;product=hydroxymethylglutaryl-CoA synthase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3285339 3286557 . - . ID=gene-NM058_17170;Name=NM058_17170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17170;pseudo=true CP101611.1 Protein Homology CDS 3285339 3286557 . - 0 ID=cds-NM058_17170;Parent=gene-NM058_17170;Note=involved in polyketide production%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019713715.1;locus_tag=NM058_17170;product=polyketide beta-ketoacyl:ACP synthase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3286554 3291824 . - . ID=gene-NM058_17175;Name=NM058_17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17175 CP101611.1 Protein Homology CDS 3286554 3291824 . - 0 ID=cds-UTX04689.1;Parent=gene-NM058_17175;Dbxref=NCBI_GP:UTX04689.1;Name=UTX04689.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012337.2;locus_tag=NM058_17175;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=UTX04689.1;transl_table=11 CP101611.1 Genbank pseudogene 3291927 3292046 . - . ID=gene-NM058_17180;Name=NM058_17180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17180;pseudo=true CP101611.1 Protein Homology CDS 3291927 3292046 . - 0 ID=cds-NM058_17180;Parent=gene-NM058_17180;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014819.2;locus_tag=NM058_17180;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3292042 3292866 . - . ID=gene-NM058_17185;Name=NM058_17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17185 CP101611.1 Protein Homology CDS 3292042 3292866 . - 0 ID=cds-UTX04690.1;Parent=gene-NM058_17185;Dbxref=NCBI_GP:UTX04690.1;Name=UTX04690.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012337.2;locus_tag=NM058_17185;product=polyketide synthase;protein_id=UTX04690.1;transl_table=11 CP101611.1 Genbank gene 3292863 3294527 . - . ID=gene-NM058_17190;Name=NM058_17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17190 CP101611.1 Protein Homology CDS 3292863 3294527 . - 0 ID=cds-UTX04691.1;Parent=gene-NM058_17190;Dbxref=NCBI_GP:UTX04691.1;Name=UTX04691.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024880.2;locus_tag=NM058_17190;product=methyltransferase;protein_id=UTX04691.1;transl_table=11 CP101611.1 Genbank gene 3294753 3298856 . - . ID=gene-NM058_17195;Name=NM058_17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17195 CP101611.1 Protein Homology CDS 3294753 3298856 . - 0 ID=cds-UTX04692.1;Parent=gene-NM058_17195;Dbxref=NCBI_GP:UTX04692.1;Name=UTX04692.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026115.2;locus_tag=NM058_17195;product=polyketide synthase dehydratase domain-containing protein;protein_id=UTX04692.1;transl_table=11 CP101611.1 Genbank gene 3298853 3301711 . - . ID=gene-NM058_17200;Name=NM058_17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17200 CP101611.1 Protein Homology CDS 3298853 3301711 . - 0 ID=cds-UTX07086.1;Parent=gene-NM058_17200;Dbxref=NCBI_GP:UTX07086.1;Name=UTX07086.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012337.2;locus_tag=NM058_17200;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=UTX07086.1;transl_table=11 CP101611.1 Genbank gene 3301744 3305028 . - . ID=gene-NM058_17205;Name=NM058_17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17205 CP101611.1 Protein Homology CDS 3301744 3305028 . - 0 ID=cds-UTX04693.1;Parent=gene-NM058_17205;Dbxref=NCBI_GP:UTX04693.1;Name=UTX04693.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012337.2;locus_tag=NM058_17205;product=SDR family oxidoreductase;protein_id=UTX04693.1;transl_table=11 CP101611.1 Genbank gene 3305025 3306740 . - . ID=gene-NM058_17210;Name=NM058_17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17210 CP101611.1 Protein Homology CDS 3305025 3306740 . - 0 ID=cds-UTX04694.1;Parent=gene-NM058_17210;Dbxref=NCBI_GP:UTX04694.1;Name=UTX04694.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026115.2;locus_tag=NM058_17210;product=polyketide synthase dehydratase domain-containing protein;protein_id=UTX04694.1;transl_table=11 CP101611.1 Genbank gene 3306752 3307117 . - . ID=gene-NM058_17215;Name=NM058_17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17215 CP101611.1 Protein Homology CDS 3306752 3307117 . - 0 ID=cds-UTX07087.1;Parent=gene-NM058_17215;Dbxref=NCBI_GP:UTX07087.1;Name=UTX07087.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027522.2;locus_tag=NM058_17215;product=hypothetical protein;protein_id=UTX07087.1;transl_table=11 CP101611.1 Genbank gene 3307137 3307805 . - . ID=gene-NM058_17220;Name=NM058_17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17220 CP101611.1 Protein Homology CDS 3307137 3307805 . - 0 ID=cds-UTX04695.1;Parent=gene-NM058_17220;Dbxref=NCBI_GP:UTX04695.1;Name=UTX04695.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014819.2;locus_tag=NM058_17220;product=polyketide synthase;protein_id=UTX04695.1;transl_table=11 CP101611.1 Genbank gene 3307739 3310621 . - . ID=gene-NM058_17225;Name=NM058_17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17225 CP101611.1 Protein Homology CDS 3307739 3310621 . - 0 ID=cds-UTX07088.1;Parent=gene-NM058_17225;Dbxref=NCBI_GP:UTX07088.1;Name=UTX07088.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020243.2;locus_tag=NM058_17225;product=KR domain-containing protein;protein_id=UTX07088.1;transl_table=11 CP101611.1 Genbank pseudogene 3311507 3313642 . - . ID=gene-NM058_17230;Name=NM058_17230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17230;pseudo=true CP101611.1 Protein Homology CDS 3311507 3313642 . - 0 ID=cds-NM058_17230;Parent=gene-NM058_17230;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010886513.1;locus_tag=NM058_17230;product=phosphopantetheine-binding protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3313772 3313891 . - . ID=gene-NM058_17235;Name=NM058_17235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17235;pseudo=true CP101611.1 Protein Homology CDS 3313772 3313891 . - 0 ID=cds-NM058_17235;Parent=gene-NM058_17235;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012759.2;locus_tag=NM058_17235;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3314047 3324276 . - . ID=gene-NM058_17240;Name=NM058_17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17240 CP101611.1 Protein Homology CDS 3314047 3324276 . - 0 ID=cds-UTX04696.1;Parent=gene-NM058_17240;Dbxref=NCBI_GP:UTX04696.1;Name=UTX04696.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026115.2;locus_tag=NM058_17240;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=UTX04696.1;transl_table=11 CP101611.1 Genbank gene 3324231 3325220 . - . ID=gene-NM058_17245;Name=NM058_17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17245 CP101611.1 Protein Homology CDS 3324231 3325220 . - 0 ID=cds-UTX04697.1;Parent=gene-NM058_17245;Dbxref=NCBI_GP:UTX04697.1;Name=UTX04697.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020243.2;locus_tag=NM058_17245;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=UTX04697.1;transl_table=11 CP101611.1 Genbank gene 3325217 3326167 . - . ID=gene-NM058_17250;Name=NM058_17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17250 CP101611.1 Protein Homology CDS 3325217 3326167 . - 0 ID=cds-UTX04698.1;Parent=gene-NM058_17250;Dbxref=NCBI_GP:UTX04698.1;Name=UTX04698.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026115.2;locus_tag=NM058_17250;product=polyketide synthase dehydratase domain-containing protein;protein_id=UTX04698.1;transl_table=11 CP101611.1 Genbank gene 3326065 3328827 . - . ID=gene-NM058_17255;Name=NM058_17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17255 CP101611.1 Protein Homology CDS 3326065 3328827 . - 0 ID=cds-UTX04699.1;Parent=gene-NM058_17255;Dbxref=NCBI_GP:UTX04699.1;Name=UTX04699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012337.2;locus_tag=NM058_17255;product=phosphopantetheine-binding protein;protein_id=UTX04699.1;transl_table=11 CP101611.1 Genbank gene 3328841 3331660 . - . ID=gene-NM058_17260;Name=NM058_17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17260 CP101611.1 Protein Homology CDS 3328841 3331660 . - 0 ID=cds-UTX04700.1;Parent=gene-NM058_17260;Dbxref=NCBI_GP:UTX04700.1;Name=UTX04700.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026115.2;locus_tag=NM058_17260;product=type I polyketide synthase;protein_id=UTX04700.1;transl_table=11 CP101611.1 Genbank gene 3331673 3332893 . - . ID=gene-NM058_17265;Name=NM058_17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17265 CP101611.1 Protein Homology CDS 3331673 3332893 . - 0 ID=cds-UTX04701.1;Parent=gene-NM058_17265;Dbxref=NCBI_GP:UTX04701.1;Name=UTX04701.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012759.2;locus_tag=NM058_17265;product=phosphopantetheine-binding protein;protein_id=UTX04701.1;transl_table=11 CP101611.1 Genbank gene 3332827 3342951 . - . ID=gene-NM058_17270;Name=NM058_17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17270 CP101611.1 Protein Homology CDS 3332827 3342951 . - 0 ID=cds-UTX04702.1;Parent=gene-NM058_17270;Dbxref=NCBI_GP:UTX04702.1;Name=UTX04702.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: protein motif:HMM:TIGR02814.1;locus_tag=NM058_17270;product=PfaD family polyunsaturated fatty acid/polyketide biosynthesis protein;protein_id=UTX04702.1;transl_table=11 CP101611.1 Genbank gene 3342876 3345485 . - . ID=gene-NM058_17275;Name=NM058_17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17275 CP101611.1 Protein Homology CDS 3342876 3345485 . - 0 ID=cds-UTX04703.1;Parent=gene-NM058_17275;Dbxref=NCBI_GP:UTX04703.1;Name=UTX04703.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012337.2;locus_tag=NM058_17275;product=phosphopantetheine-binding protein;protein_id=UTX04703.1;transl_table=11 CP101611.1 Genbank gene 3345475 3346278 . - . ID=gene-NM058_17280;Name=NM058_17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17280 CP101611.1 Protein Homology CDS 3345475 3346278 . - 0 ID=cds-UTX04704.1;Parent=gene-NM058_17280;Dbxref=NCBI_GP:UTX04704.1;Name=UTX04704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015892243.1;locus_tag=NM058_17280;product=lysophospholipase;protein_id=UTX04704.1;transl_table=11 CP101611.1 Genbank gene 3346294 3346962 . - . ID=gene-NM058_17285;Name=NM058_17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17285 CP101611.1 Protein Homology CDS 3346294 3346962 . - 0 ID=cds-UTX04705.1;Parent=gene-NM058_17285;Dbxref=NCBI_GP:UTX04705.1;Name=UTX04705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019713707.1;locus_tag=NM058_17285;product=MBL fold metallo-hydrolase;protein_id=UTX04705.1;transl_table=11 CP101611.1 Genbank gene 3346959 3347207 . - . ID=gene-NM058_17290;Name=NM058_17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17290 CP101611.1 Protein Homology CDS 3346959 3347207 . - 0 ID=cds-UTX04706.1;Parent=gene-NM058_17290;Dbxref=NCBI_GP:UTX04706.1;Name=UTX04706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003231809.1;locus_tag=NM058_17290;product=acyl carrier protein;protein_id=UTX04706.1;transl_table=11 CP101611.1 Genbank pseudogene 3347224 3349534 . - . ID=gene-NM058_17295;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=pseudogene;locus_tag=NM058_17295;pseudo=true CP101611.1 Protein Homology CDS 3347224 3349534 . - 0 ID=cds-NM058_17295;Parent=gene-NM058_17295;Note=frameshifted;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019713705.1;locus_tag=NM058_17295;product=ACP S-malonyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3349601 3350380 . - . ID=gene-NM058_17300;Name=NM058_17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17300 CP101611.1 Protein Homology CDS 3349601 3350380 . - 0 ID=cds-UTX04707.1;Parent=gene-NM058_17300;Dbxref=NCBI_GP:UTX04707.1;Name=UTX04707.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: protein motif:HMM:NF013786.2;locus_tag=NM058_17300;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=UTX04707.1;transl_table=11 CP101611.1 Genbank gene 3350559 3351227 . - . ID=gene-NM058_17305;Name=NM058_17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17305 CP101611.1 Protein Homology CDS 3350559 3351227 . - 0 ID=cds-UTX04708.1;Parent=gene-NM058_17305;Dbxref=NCBI_GP:UTX04708.1;Name=UTX04708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019713703.1;locus_tag=NM058_17305;product=class I SAM-dependent methyltransferase;protein_id=UTX04708.1;transl_table=11 CP101611.1 Genbank gene 3351312 3352670 . - . ID=gene-NM058_17310;Name=NM058_17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17310 CP101611.1 Protein Homology CDS 3351312 3352670 . - 0 ID=cds-UTX04709.1;Parent=gene-NM058_17310;Dbxref=NCBI_GP:UTX04709.1;Name=UTX04709.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013703.2;locus_tag=NM058_17310;product=MATE family efflux transporter;protein_id=UTX04709.1;transl_table=11 CP101611.1 Genbank gene 3352713 3353669 . - . ID=gene-NM058_17315;Name=NM058_17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17315 CP101611.1 Protein Homology CDS 3352713 3353669 . - 0 ID=cds-UTX04710.1;Parent=gene-NM058_17315;Dbxref=NCBI_GP:UTX04710.1;Name=UTX04710.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012901.2;locus_tag=NM058_17315;product=acyltransferase domain-containing protein;protein_id=UTX04710.1;transl_table=11 CP101611.1 Genbank gene 3353822 3354379 . - . ID=gene-NM058_17320;Name=loaP;gbkey=Gene;gene=loaP;gene_biotype=protein_coding;locus_tag=NM058_17320 CP101611.1 Protein Homology CDS 3353822 3354379 . - 0 ID=cds-UTX04711.1;Parent=gene-NM058_17320;Dbxref=NCBI_GP:UTX04711.1;Name=UTX04711.1;gbkey=CDS;gene=loaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019713700.1;locus_tag=NM058_17320;product=antiterminator LoaP;protein_id=UTX04711.1;transl_table=11 CP101611.1 Genbank gene 3355453 3355534 . - . ID=gene-NM058_17325;Name=NM058_17325;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_17325 CP101611.1 tRNAscan-SE tRNA 3355453 3355534 . - . ID=rna-NM058_17325;Parent=gene-NM058_17325;anticodon=(pos:complement(3355498..3355500));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17325;product=tRNA-Leu CP101611.1 tRNAscan-SE exon 3355453 3355534 . - . ID=exon-NM058_17325-1;Parent=rna-NM058_17325;anticodon=(pos:complement(3355498..3355500));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17325;product=tRNA-Leu CP101611.1 Genbank gene 3355816 3355904 . - . ID=gene-NM058_17330;Name=NM058_17330;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_17330 CP101611.1 tRNAscan-SE tRNA 3355816 3355904 . - . ID=rna-NM058_17330;Parent=gene-NM058_17330;anticodon=(pos:complement(3355868..3355870));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17330;product=tRNA-Leu CP101611.1 tRNAscan-SE exon 3355816 3355904 . - . ID=exon-NM058_17330-1;Parent=rna-NM058_17330;anticodon=(pos:complement(3355868..3355870));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17330;product=tRNA-Leu CP101611.1 Genbank gene 3355912 3355982 . - . ID=gene-NM058_17335;Name=NM058_17335;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_17335 CP101611.1 tRNAscan-SE tRNA 3355912 3355982 . - . ID=rna-NM058_17335;Parent=gene-NM058_17335;anticodon=(pos:complement(3355948..3355950));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17335;product=tRNA-Cys CP101611.1 tRNAscan-SE exon 3355912 3355982 . - . ID=exon-NM058_17335-1;Parent=rna-NM058_17335;anticodon=(pos:complement(3355948..3355950));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17335;product=tRNA-Cys CP101611.1 Genbank gene 3355988 3356062 . - . ID=gene-NM058_17340;Name=NM058_17340;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_17340 CP101611.1 tRNAscan-SE tRNA 3355988 3356062 . - . ID=rna-NM058_17340;Parent=gene-NM058_17340;anticodon=(pos:complement(3356028..3356030));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17340;product=tRNA-Gly CP101611.1 tRNAscan-SE exon 3355988 3356062 . - . ID=exon-NM058_17340-1;Parent=rna-NM058_17340;anticodon=(pos:complement(3356028..3356030));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17340;product=tRNA-Gly CP101611.1 Genbank gene 3356110 3356181 . - . ID=gene-NM058_17345;Name=NM058_17345;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_17345 CP101611.1 tRNAscan-SE tRNA 3356110 3356181 . - . ID=rna-NM058_17345;Parent=gene-NM058_17345;anticodon=(pos:complement(3356147..3356149));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17345;product=tRNA-Gln CP101611.1 tRNAscan-SE exon 3356110 3356181 . - . ID=exon-NM058_17345-1;Parent=rna-NM058_17345;anticodon=(pos:complement(3356147..3356149));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17345;product=tRNA-Gln CP101611.1 Genbank gene 3356191 3356266 . - . ID=gene-NM058_17350;Name=NM058_17350;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_17350 CP101611.1 tRNAscan-SE tRNA 3356191 3356266 . - . ID=rna-NM058_17350;Parent=gene-NM058_17350;anticodon=(pos:complement(3356231..3356233));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17350;product=tRNA-His CP101611.1 tRNAscan-SE exon 3356191 3356266 . - . ID=exon-NM058_17350-1;Parent=rna-NM058_17350;anticodon=(pos:complement(3356231..3356233));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17350;product=tRNA-His CP101611.1 Genbank gene 3356291 3356364 . - . ID=gene-NM058_17355;Name=NM058_17355;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_17355 CP101611.1 tRNAscan-SE tRNA 3356291 3356364 . - . ID=rna-NM058_17355;Parent=gene-NM058_17355;anticodon=(pos:complement(3356330..3356332));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17355;product=tRNA-Trp CP101611.1 tRNAscan-SE exon 3356291 3356364 . - . ID=exon-NM058_17355-1;Parent=rna-NM058_17355;anticodon=(pos:complement(3356330..3356332));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17355;product=tRNA-Trp CP101611.1 Genbank gene 3356370 3356453 . - . ID=gene-NM058_17360;Name=NM058_17360;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_17360 CP101611.1 tRNAscan-SE tRNA 3356370 3356453 . - . ID=rna-NM058_17360;Parent=gene-NM058_17360;anticodon=(pos:complement(3356417..3356419));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17360;product=tRNA-Tyr CP101611.1 tRNAscan-SE exon 3356370 3356453 . - . ID=exon-NM058_17360-1;Parent=rna-NM058_17360;anticodon=(pos:complement(3356417..3356419));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17360;product=tRNA-Tyr CP101611.1 Genbank gene 3356475 3356547 . - . ID=gene-NM058_17365;Name=NM058_17365;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_17365 CP101611.1 tRNAscan-SE tRNA 3356475 3356547 . - . ID=rna-NM058_17365;Parent=gene-NM058_17365;anticodon=(pos:complement(3356512..3356514));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17365;product=tRNA-Thr CP101611.1 tRNAscan-SE exon 3356475 3356547 . - . ID=exon-NM058_17365-1;Parent=rna-NM058_17365;anticodon=(pos:complement(3356512..3356514));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17365;product=tRNA-Thr CP101611.1 Genbank gene 3356553 3356628 . - . ID=gene-NM058_17370;Name=NM058_17370;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_17370 CP101611.1 tRNAscan-SE tRNA 3356553 3356628 . - . ID=rna-NM058_17370;Parent=gene-NM058_17370;anticodon=(pos:complement(3356593..3356595));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17370;product=tRNA-Phe CP101611.1 tRNAscan-SE exon 3356553 3356628 . - . ID=exon-NM058_17370-1;Parent=rna-NM058_17370;anticodon=(pos:complement(3356593..3356595));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17370;product=tRNA-Phe CP101611.1 Genbank gene 3356641 3356717 . - . ID=gene-NM058_17375;Name=NM058_17375;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_17375 CP101611.1 tRNAscan-SE tRNA 3356641 3356717 . - . ID=rna-NM058_17375;Parent=gene-NM058_17375;anticodon=(pos:complement(3356681..3356683));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17375;product=tRNA-Asp CP101611.1 tRNAscan-SE exon 3356641 3356717 . - . ID=exon-NM058_17375-1;Parent=rna-NM058_17375;anticodon=(pos:complement(3356681..3356683));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17375;product=tRNA-Asp CP101611.1 Genbank gene 3356732 3356808 . - . ID=gene-NM058_17380;Name=NM058_17380;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_17380 CP101611.1 tRNAscan-SE tRNA 3356732 3356808 . - . ID=rna-NM058_17380;Parent=gene-NM058_17380;anticodon=(pos:complement(3356772..3356774));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17380;product=tRNA-Met CP101611.1 tRNAscan-SE exon 3356732 3356808 . - . ID=exon-NM058_17380-1;Parent=rna-NM058_17380;anticodon=(pos:complement(3356772..3356774));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17380;product=tRNA-Met CP101611.1 Genbank gene 3356816 3356891 . - . ID=gene-NM058_17385;Name=NM058_17385;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_17385 CP101611.1 tRNAscan-SE tRNA 3356816 3356891 . - . ID=rna-NM058_17385;Parent=gene-NM058_17385;anticodon=(pos:complement(3356856..3356858));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17385;product=tRNA-Val CP101611.1 tRNAscan-SE exon 3356816 3356891 . - . ID=exon-NM058_17385-1;Parent=rna-NM058_17385;anticodon=(pos:complement(3356856..3356858));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17385;product=tRNA-Val CP101611.1 Genbank gene 3356901 3356972 . - . ID=gene-NM058_17390;Name=NM058_17390;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_17390 CP101611.1 tRNAscan-SE tRNA 3356901 3356972 . - . ID=rna-NM058_17390;Parent=gene-NM058_17390;anticodon=(pos:complement(3356937..3356939));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17390;product=tRNA-Glu CP101611.1 tRNAscan-SE exon 3356901 3356972 . - . ID=exon-NM058_17390-1;Parent=rna-NM058_17390;anticodon=(pos:complement(3356937..3356939));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17390;product=tRNA-Glu CP101611.1 Genbank gene 3357007 3357098 . - . ID=gene-NM058_17395;Name=NM058_17395;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_17395 CP101611.1 tRNAscan-SE tRNA 3357007 3357098 . - . ID=rna-NM058_17395;Parent=gene-NM058_17395;anticodon=(pos:complement(3357062..3357064));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17395;product=tRNA-Ser CP101611.1 tRNAscan-SE exon 3357007 3357098 . - . ID=exon-NM058_17395-1;Parent=rna-NM058_17395;anticodon=(pos:complement(3357062..3357064));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17395;product=tRNA-Ser CP101611.1 Genbank gene 3357104 3357178 . - . ID=gene-NM058_17400;Name=NM058_17400;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_17400 CP101611.1 tRNAscan-SE tRNA 3357104 3357178 . - . ID=rna-NM058_17400;Parent=gene-NM058_17400;anticodon=(pos:complement(3357144..3357146));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17400;product=tRNA-Asn CP101611.1 tRNAscan-SE exon 3357104 3357178 . - . ID=exon-NM058_17400-1;Parent=rna-NM058_17400;anticodon=(pos:complement(3357144..3357146));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_17400;product=tRNA-Asn CP101611.1 Genbank gene 3357188 3357303 . - . ID=gene-NM058_17405;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NM058_17405 CP101611.1 cmsearch rRNA 3357188 3357303 . - . ID=rna-NM058_17405;Parent=gene-NM058_17405;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_17405;product=5S ribosomal RNA CP101611.1 cmsearch exon 3357188 3357303 . - . ID=exon-NM058_17405-1;Parent=rna-NM058_17405;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_17405;product=5S ribosomal RNA CP101611.1 Genbank gene 3357417 3360344 . - . ID=gene-NM058_17410;Name=NM058_17410;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_17410 CP101611.1 cmsearch rRNA 3357417 3360344 . - . ID=rna-NM058_17410;Parent=gene-NM058_17410;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_17410;product=23S ribosomal RNA CP101611.1 cmsearch exon 3357417 3360344 . - . ID=exon-NM058_17410-1;Parent=rna-NM058_17410;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_17410;product=23S ribosomal RNA CP101611.1 Genbank gene 3360514 3362063 . - . ID=gene-NM058_17415;Name=NM058_17415;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_17415 CP101611.1 cmsearch rRNA 3360514 3362063 . - . ID=rna-NM058_17415;Parent=gene-NM058_17415;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_17415;product=16S ribosomal RNA CP101611.1 cmsearch exon 3360514 3362063 . - . ID=exon-NM058_17415-1;Parent=rna-NM058_17415;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_17415;product=16S ribosomal RNA CP101611.1 Genbank pseudogene 3362292 3363175 . - . ID=gene-NM058_17420;Name=NM058_17420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17420;pseudo=true CP101611.1 Protein Homology CDS 3362292 3363175 . - 0 ID=cds-NM058_17420;Parent=gene-NM058_17420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388755.1;locus_tag=NM058_17420;product=nucleotidyltransferase-like protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3363383 3363736 . + . ID=gene-NM058_17425;Name=NM058_17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17425 CP101611.1 Protein Homology CDS 3363383 3363736 . + 0 ID=cds-UTX04712.1;Parent=gene-NM058_17425;Dbxref=NCBI_GP:UTX04712.1;Name=UTX04712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054575.1;locus_tag=NM058_17425;product=YgzB family protein;protein_id=UTX04712.1;transl_table=11 CP101611.1 Genbank pseudogene 3363782 3364207 . - . ID=gene-NM058_17430;Name=perR;gbkey=Gene;gene=perR;gene_biotype=pseudogene;locus_tag=NM058_17430;pseudo=true CP101611.1 Protein Homology CDS 3363782 3364207 . - 0 ID=cds-NM058_17430;Parent=gene-NM058_17430;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;gene=perR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388753.1;locus_tag=NM058_17430;product=peroxide-responsive transcriptional repressor PerR;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3364340 3364813 . - . ID=gene-NM058_17435;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=NM058_17435 CP101611.1 Protein Homology CDS 3364340 3364813 . - 0 ID=cds-UTX04713.1;Parent=gene-NM058_17435;Dbxref=NCBI_GP:UTX04713.1;Name=UTX04713.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054574.1;locus_tag=NM058_17435;product=thioredoxin-dependent thiol peroxidase;protein_id=UTX04713.1;transl_table=11 CP101611.1 Genbank pseudogene 3364966 3366254 . + . ID=gene-NM058_17440;Name=NM058_17440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17440;pseudo=true CP101611.1 Protein Homology CDS 3364966 3366254 . + 0 ID=cds-NM058_17440;Parent=gene-NM058_17440;Note=frameshifted;Ontology_term=GO:0033014,GO:0030170,GO:0042286;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388751.3;locus_tag=NM058_17440;product=glutamate-1-semialdehyde 2%2C1-aminomutase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3366473 3367534 . + . ID=gene-NM058_17445;Name=NM058_17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17445 CP101611.1 Protein Homology CDS 3366473 3367534 . + 0 ID=cds-UTX04714.1;Parent=gene-NM058_17445;Dbxref=NCBI_GP:UTX04714.1;Name=UTX04714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388750.1;locus_tag=NM058_17445;product=aromatic acid exporter family protein;protein_id=UTX04714.1;transl_table=11 CP101611.1 Genbank gene 3367610 3369352 . - . ID=gene-NM058_17450;Name=NM058_17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17450 CP101611.1 Protein Homology CDS 3367610 3369352 . - 0 ID=cds-UTX04715.1;Parent=gene-NM058_17450;Dbxref=NCBI_GP:UTX04715.1;Name=UTX04715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388749.2;locus_tag=NM058_17450;product=ABC transporter ATP-binding protein/permease;protein_id=UTX04715.1;transl_table=11 CP101611.1 Genbank gene 3369439 3369969 . - . ID=gene-NM058_17455;Name=NM058_17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17455 CP101611.1 Protein Homology CDS 3369439 3369969 . - 0 ID=cds-UTX04716.1;Parent=gene-NM058_17455;Dbxref=NCBI_GP:UTX04716.1;Name=UTX04716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388748.3;locus_tag=NM058_17455;product=DUF402 domain-containing protein;protein_id=UTX04716.1;transl_table=11 CP101611.1 Genbank gene 3370113 3370373 . - . ID=gene-NM058_17460;Name=NM058_17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17460 CP101611.1 Protein Homology CDS 3370113 3370373 . - 0 ID=cds-UTX04717.1;Parent=gene-NM058_17460;Dbxref=NCBI_GP:UTX04717.1;Name=UTX04717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014113115.1;locus_tag=NM058_17460;product=hypothetical protein;protein_id=UTX04717.1;transl_table=11 CP101611.1 Genbank gene 3370546 3370803 . - . ID=gene-NM058_17465;Name=sspE;gbkey=Gene;gene=sspE;gene_biotype=protein_coding;locus_tag=NM058_17465 CP101611.1 Protein Homology CDS 3370546 3370803 . - 0 ID=cds-UTX04718.1;Parent=gene-NM058_17465;Dbxref=NCBI_GP:UTX04718.1;Name=UTX04718.1;gbkey=CDS;gene=sspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388746.1;locus_tag=NM058_17465;product=gamma type acid-soluble spore protein SspE;protein_id=UTX04718.1;transl_table=11 CP101611.1 Genbank gene 3370871 3371623 . - . ID=gene-NM058_17470;Name=fabL;gbkey=Gene;gene=fabL;gene_biotype=protein_coding;locus_tag=NM058_17470 CP101611.1 Protein Homology CDS 3370871 3371623 . - 0 ID=cds-UTX04719.1;Parent=gene-NM058_17470;Dbxref=NCBI_GP:UTX04719.1;Name=UTX04719.1;gbkey=CDS;gene=fabL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388745.1;locus_tag=NM058_17470;product=enoyl-[acyl-carrier-protein] reductase FabL;protein_id=UTX04719.1;transl_table=11 CP101611.1 Genbank gene 3371706 3371930 . + . ID=gene-NM058_17475;Name=NM058_17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17475 CP101611.1 Protein Homology CDS 3371706 3371930 . + 0 ID=cds-UTX04720.1;Parent=gene-NM058_17475;Dbxref=NCBI_GP:UTX04720.1;Name=UTX04720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388744.1;locus_tag=NM058_17475;product=hypothetical protein;protein_id=UTX04720.1;transl_table=11 CP101611.1 Genbank gene 3371937 3373046 . - . ID=gene-NM058_17480;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=NM058_17480 CP101611.1 Protein Homology CDS 3371937 3373046 . - 0 ID=cds-UTX04721.1;Parent=gene-NM058_17480;Dbxref=NCBI_GP:UTX04721.1;Name=UTX04721.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0004844;gbkey=CDS;gene=mutY;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388743.1;locus_tag=NM058_17480;product=A/G-specific adenine glycosylase;protein_id=UTX04721.1;transl_table=11 CP101611.1 Genbank gene 3373263 3374246 . + . ID=gene-NM058_17485;Name=NM058_17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17485 CP101611.1 Protein Homology CDS 3373263 3374246 . + 0 ID=cds-UTX04722.1;Parent=gene-NM058_17485;Dbxref=NCBI_GP:UTX04722.1;Name=UTX04722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388742.1;locus_tag=NM058_17485;product=metal-dependent hydrolase;protein_id=UTX04722.1;transl_table=11 CP101611.1 Genbank pseudogene 3374226 3376819 . - . ID=gene-NM058_17490;Name=NM058_17490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17490;pseudo=true CP101611.1 Protein Homology CDS 3374226 3376819 . - 0 ID=cds-NM058_17490;Parent=gene-NM058_17490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003223251.1;locus_tag=NM058_17490;product=YfhO family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3376891 3377880 . - . ID=gene-NM058_17495;Name=NM058_17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17495 CP101611.1 Protein Homology CDS 3376891 3377880 . - 0 ID=cds-UTX04723.1;Parent=gene-NM058_17495;Dbxref=NCBI_GP:UTX04723.1;Name=UTX04723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388740.1;locus_tag=NM058_17495;product=glycosyltransferase family 2 protein;protein_id=UTX04723.1;transl_table=11 CP101611.1 Genbank gene 3378113 3378973 . - . ID=gene-NM058_17500;Name=NM058_17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17500 CP101611.1 Protein Homology CDS 3378113 3378973 . - 0 ID=cds-UTX04724.1;Parent=gene-NM058_17500;Dbxref=NCBI_GP:UTX04724.1;Name=UTX04724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388739.1;locus_tag=NM058_17500;product=alpha/beta hydrolase;protein_id=UTX04724.1;transl_table=11 CP101611.1 Genbank gene 3378960 3379292 . - . ID=gene-NM058_17505;Name=NM058_17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17505 CP101611.1 Protein Homology CDS 3378960 3379292 . - 0 ID=cds-UTX04725.1;Parent=gene-NM058_17505;Dbxref=NCBI_GP:UTX04725.1;Name=UTX04725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388738.1;locus_tag=NM058_17505;product=SdpI family protein;protein_id=UTX04725.1;transl_table=11 CP101611.1 Genbank pseudogene 3379380 3379893 . - . ID=gene-NM058_17510;Name=NM058_17510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17510;pseudo=true CP101611.1 Protein Homology CDS 3379380 3379893 . - 0 ID=cds-NM058_17510;Parent=gene-NM058_17510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257836.1;locus_tag=NM058_17510;product=SH3 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3380038 3380307 . - . ID=gene-NM058_17515;Name=NM058_17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17515 CP101611.1 Protein Homology CDS 3380038 3380307 . - 0 ID=cds-UTX04726.1;Parent=gene-NM058_17515;Dbxref=NCBI_GP:UTX04726.1;Name=UTX04726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388736.1;locus_tag=NM058_17515;product=YfhJ family protein;protein_id=UTX04726.1;transl_table=11 CP101611.1 Genbank gene 3380432 3380584 . + . ID=gene-NM058_17520;Name=NM058_17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17520 CP101611.1 Protein Homology CDS 3380432 3380584 . + 0 ID=cds-UTX04727.1;Parent=gene-NM058_17520;Dbxref=NCBI_GP:UTX04727.1;Name=UTX04727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054573.1;locus_tag=NM058_17520;product=small%2C acid-soluble spore protein K;protein_id=UTX04727.1;transl_table=11 CP101611.1 Genbank pseudogene 3380738 3381927 . - . ID=gene-NM058_17525;Name=NM058_17525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17525;pseudo=true CP101611.1 Protein Homology CDS 3380738 3381927 . - 0 ID=cds-NM058_17525;Parent=gene-NM058_17525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388735.1;locus_tag=NM058_17525;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3382065 3382385 . - . ID=gene-NM058_17530;Name=NM058_17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17530 CP101611.1 Protein Homology CDS 3382065 3382385 . - 0 ID=cds-UTX04728.1;Parent=gene-NM058_17530;Dbxref=NCBI_GP:UTX04728.1;Name=UTX04728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257834.1;locus_tag=NM058_17530;product=YfhH family protein;protein_id=UTX04728.1;transl_table=11 CP101611.1 Genbank gene 3382394 3383185 . - . ID=gene-NM058_17535;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=NM058_17535 CP101611.1 Protein Homology CDS 3382394 3383185 . - 0 ID=cds-UTX04729.1;Parent=gene-NM058_17535;Dbxref=NCBI_GP:UTX04729.1;Name=UTX04729.1;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007408552.1;locus_tag=NM058_17535;product=recombination regulator RecX;protein_id=UTX04729.1;transl_table=11 CP101611.1 Genbank gene 3383274 3384185 . + . ID=gene-NM058_17540;Name=NM058_17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17540 CP101611.1 Protein Homology CDS 3383274 3384185 . + 0 ID=cds-UTX04730.1;Parent=gene-NM058_17540;Dbxref=NCBI_GP:UTX04730.1;Name=UTX04730.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388732.1;locus_tag=NM058_17540;product=TIGR01777 family oxidoreductase;protein_id=UTX04730.1;transl_table=11 CP101611.1 Genbank gene 3384240 3384350 . + . ID=gene-NM058_17545;Name=NM058_17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17545 CP101611.1 Protein Homology CDS 3384240 3384350 . + 0 ID=cds-UTX04731.1;Parent=gene-NM058_17545;Dbxref=NCBI_GP:UTX04731.1;Name=UTX04731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388731.1;locus_tag=NM058_17545;product=YfhE family protein;protein_id=UTX04731.1;transl_table=11 CP101611.1 Genbank gene 3384417 3384608 . + . ID=gene-NM058_17550;Name=NM058_17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17550 CP101611.1 Protein Homology CDS 3384417 3384608 . + 0 ID=cds-UTX04732.1;Parent=gene-NM058_17550;Dbxref=NCBI_GP:UTX04732.1;Name=UTX04732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388730.1;locus_tag=NM058_17550;product=YfhD family protein;protein_id=UTX04732.1;transl_table=11 CP101611.1 Genbank gene 3384647 3385231 . - . ID=gene-NM058_17555;Name=NM058_17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17555 CP101611.1 Protein Homology CDS 3384647 3385231 . - 0 ID=cds-UTX04733.1;Parent=gene-NM058_17555;Dbxref=NCBI_GP:UTX04733.1;Name=UTX04733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388729.1;locus_tag=NM058_17555;product=nitroreductase;protein_id=UTX04733.1;transl_table=11 CP101611.1 Genbank gene 3385318 3386199 . - . ID=gene-NM058_17560;Name=NM058_17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17560 CP101611.1 Protein Homology CDS 3385318 3386199 . - 0 ID=cds-UTX04734.1;Parent=gene-NM058_17560;Dbxref=NCBI_GP:UTX04734.1;Name=UTX04734.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388728.1;locus_tag=NM058_17560;product=PhzF family phenazine biosynthesis isomerase;protein_id=UTX04734.1;transl_table=11 CP101611.1 Genbank pseudogene 3386314 3387344 . - . ID=gene-NM058_17565;Name=NM058_17565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17565;pseudo=true CP101611.1 Protein Homology CDS 3386314 3387344 . - 0 ID=cds-NM058_17565;Parent=gene-NM058_17565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388727.1;locus_tag=NM058_17565;product=iron ABC transporter permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3387313 3388341 . - . ID=gene-NM058_17570;Name=NM058_17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17570 CP101611.1 Protein Homology CDS 3387313 3388341 . - 0 ID=cds-UTX04735.1;Parent=gene-NM058_17570;Dbxref=NCBI_GP:UTX04735.1;Name=UTX04735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388726.1;locus_tag=NM058_17570;product=iron ABC transporter permease;protein_id=UTX04735.1;transl_table=11 CP101611.1 Genbank gene 3388472 3389449 . + . ID=gene-NM058_17575;Name=NM058_17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17575 CP101611.1 Protein Homology CDS 3388472 3389449 . + 0 ID=cds-UTX04736.1;Parent=gene-NM058_17575;Dbxref=NCBI_GP:UTX04736.1;Name=UTX04736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388725.1;locus_tag=NM058_17575;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=UTX04736.1;transl_table=11 CP101611.1 Genbank pseudogene 3389467 3392036 . - . ID=gene-NM058_17580;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=pseudogene;locus_tag=NM058_17580;pseudo=true CP101611.1 Protein Homology CDS 3389467 3392036 . - 0 ID=cds-NM058_17580;Parent=gene-NM058_17580;Note=frameshifted;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097695.1;locus_tag=NM058_17580;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3392208 3392690 . + . ID=gene-NM058_17585;Name=NM058_17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17585 CP101611.1 Protein Homology CDS 3392208 3392690 . + 0 ID=cds-UTX04737.1;Parent=gene-NM058_17585;Dbxref=NCBI_GP:UTX04737.1;Name=UTX04737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388722.1;locus_tag=NM058_17585;product=MarR family transcriptional regulator;protein_id=UTX04737.1;transl_table=11 CP101611.1 Genbank gene 3392802 3394358 . + . ID=gene-NM058_17590;Name=NM058_17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17590 CP101611.1 Protein Homology CDS 3392802 3394358 . + 0 ID=cds-UTX04738.1;Parent=gene-NM058_17590;Dbxref=NCBI_GP:UTX04738.1;Name=UTX04738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388721.1;locus_tag=NM058_17590;product=MFS transporter;protein_id=UTX04738.1;transl_table=11 CP101611.1 Genbank gene 3394355 3394891 . - . ID=gene-NM058_17595;Name=bstA;gbkey=Gene;gene=bstA;gene_biotype=protein_coding;locus_tag=NM058_17595 CP101611.1 Protein Homology CDS 3394355 3394891 . - 0 ID=cds-UTX04739.1;Parent=gene-NM058_17595;Dbxref=NCBI_GP:UTX04739.1;Name=UTX04739.1;gbkey=CDS;gene=bstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388720.1;locus_tag=NM058_17595;product=bacillithiol transferase BstA;protein_id=UTX04739.1;transl_table=11 CP101611.1 Genbank pseudogene 3395025 3396111 . - . ID=gene-NM058_17600;Name=NM058_17600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17600;pseudo=true CP101611.1 Protein Homology CDS 3395025 3396111 . - 0 ID=cds-NM058_17600;Parent=gene-NM058_17600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388717.1;locus_tag=NM058_17600;product=acyltransferase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3396709 3397428 . + . ID=gene-NM058_17605;Name=NM058_17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17605 CP101611.1 Protein Homology CDS 3396709 3397428 . + 0 ID=cds-UTX04740.1;Parent=gene-NM058_17605;Dbxref=NCBI_GP:UTX04740.1;Name=UTX04740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015383136.1;locus_tag=NM058_17605;product=ABC transporter ATP-binding protein;protein_id=UTX04740.1;transl_table=11 CP101611.1 Genbank gene 3397425 3398432 . + . ID=gene-NM058_17610;Name=NM058_17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17610 CP101611.1 Protein Homology CDS 3397425 3398432 . + 0 ID=cds-UTX04741.1;Parent=gene-NM058_17610;Dbxref=NCBI_GP:UTX04741.1;Name=UTX04741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015383135.1;locus_tag=NM058_17610;product=ABC transporter permease;protein_id=UTX04741.1;transl_table=11 CP101611.1 Genbank gene 3398449 3399087 . + . ID=gene-NM058_17615;Name=NM058_17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17615 CP101611.1 Protein Homology CDS 3398449 3399087 . + 0 ID=cds-UTX04742.1;Parent=gene-NM058_17615;Dbxref=NCBI_GP:UTX04742.1;Name=UTX04742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257817.1;locus_tag=NM058_17615;product=NAD(P)H-binding protein;protein_id=UTX04742.1;transl_table=11 CP101611.1 Genbank gene 3399162 3399815 . + . ID=gene-NM058_17620;Name=NM058_17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17620 CP101611.1 Protein Homology CDS 3399162 3399815 . + 0 ID=cds-UTX04743.1;Parent=gene-NM058_17620;Dbxref=NCBI_GP:UTX04743.1;Name=UTX04743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015482970.1;locus_tag=NM058_17620;product=TetR/AcrR family transcriptional regulator;protein_id=UTX04743.1;transl_table=11 CP101611.1 Genbank gene 3400013 3400645 . - . ID=gene-NM058_17625;Name=estB;gbkey=Gene;gene=estB;gene_biotype=protein_coding;locus_tag=NM058_17625 CP101611.1 Protein Homology CDS 3400013 3400645 . - 0 ID=cds-UTX04744.1;Parent=gene-NM058_17625;Dbxref=NCBI_GP:UTX04744.1;Name=UTX04744.1;gbkey=CDS;gene=estB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388716.1;locus_tag=NM058_17625;product=esterase EstB;protein_id=UTX04744.1;transl_table=11 CP101611.1 Genbank gene 3400930 3401478 . + . ID=gene-NM058_17630;Name=padR;gbkey=Gene;gene=padR;gene_biotype=protein_coding;locus_tag=NM058_17630 CP101611.1 Protein Homology CDS 3400930 3401478 . + 0 ID=cds-UTX04745.1;Parent=gene-NM058_17630;Dbxref=NCBI_GP:UTX04745.1;Name=UTX04745.1;gbkey=CDS;gene=padR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388715.1;locus_tag=NM058_17630;product=transcriptional regulator PadR;protein_id=UTX04745.1;transl_table=11 CP101611.1 Genbank gene 3401529 3402128 . + . ID=gene-NM058_17635;Name=NM058_17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17635 CP101611.1 Protein Homology CDS 3401529 3402128 . + 0 ID=cds-UTX04746.1;Parent=gene-NM058_17635;Dbxref=NCBI_GP:UTX04746.1;Name=UTX04746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017696461.1;locus_tag=NM058_17635;product=GNAT family N-acetyltransferase;protein_id=UTX04746.1;transl_table=11 CP101611.1 Genbank pseudogene 3402165 3403318 . - . ID=gene-NM058_17640;Name=NM058_17640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17640;pseudo=true CP101611.1 Protein Homology CDS 3402165 3403318 . - 0 ID=cds-NM058_17640;Parent=gene-NM058_17640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388714.1;locus_tag=NM058_17640;product=ABC transporter permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3403333 3404523 . - . ID=gene-NM058_17645;Name=NM058_17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17645 CP101611.1 Protein Homology CDS 3403333 3404523 . - 0 ID=cds-UTX04747.1;Parent=gene-NM058_17645;Dbxref=NCBI_GP:UTX04747.1;Name=UTX04747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388713.1;locus_tag=NM058_17645;product=ABC transporter permease;protein_id=UTX04747.1;transl_table=11 CP101611.1 Genbank pseudogene 3404536 3405470 . - . ID=gene-NM058_17650;Name=lnrL;gbkey=Gene;gene=lnrL;gene_biotype=pseudogene;locus_tag=NM058_17650;pseudo=true CP101611.1 Protein Homology CDS 3404536 3405470 . - 0 ID=cds-NM058_17650;Parent=gene-NM058_17650;Note=frameshifted;gbkey=CDS;gene=lnrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388712.2;locus_tag=NM058_17650;product=linearmycin resistance ATP-binding protein LnrL;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3405614 3406276 . - . ID=gene-NM058_17655;Name=lnrK;gbkey=Gene;gene=lnrK;gene_biotype=protein_coding;gene_synonym=linK;locus_tag=NM058_17655 CP101611.1 Protein Homology CDS 3405614 3406276 . - 0 ID=cds-UTX04748.1;Parent=gene-NM058_17655;Dbxref=NCBI_GP:UTX04748.1;Name=UTX04748.1;gbkey=CDS;gene=lnrK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388711.1;locus_tag=NM058_17655;product=two-component system response regulator LnrK;protein_id=UTX04748.1;transl_table=11 CP101611.1 Genbank pseudogene 3406273 3407473 . - . ID=gene-NM058_17660;Name=NM058_17660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17660;pseudo=true CP101611.1 Protein Homology CDS 3406273 3407473 . - 0 ID=cds-NM058_17660;Parent=gene-NM058_17660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388710.1;locus_tag=NM058_17660;product=sensor histidine kinase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3407597 3408777 . - . ID=gene-NM058_17665;Name=NM058_17665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17665;pseudo=true CP101611.1 Protein Homology CDS 3407597 3408777 . - 0 ID=cds-NM058_17665;Parent=gene-NM058_17665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388709.1;locus_tag=NM058_17665;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3408787 3409728 . - . ID=gene-NM058_17670;Name=NM058_17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17670 CP101611.1 Protein Homology CDS 3408787 3409728 . - 0 ID=cds-UTX04749.1;Parent=gene-NM058_17670;Dbxref=NCBI_GP:UTX04749.1;Name=UTX04749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388708.1;locus_tag=NM058_17670;product=sugar phosphate isomerase/epimerase;protein_id=UTX04749.1;transl_table=11 CP101611.1 Genbank pseudogene 3409756 3411203 . - . ID=gene-NM058_17675;Name=NM058_17675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17675;pseudo=true CP101611.1 Protein Homology CDS 3409756 3411203 . - 0 ID=cds-NM058_17675;Parent=gene-NM058_17675;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388707.1;locus_tag=NM058_17675;product=sugar porter family MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3411378 3412322 . - . ID=gene-NM058_17680;Name=NM058_17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17680 CP101611.1 Protein Homology CDS 3411378 3412322 . - 0 ID=cds-UTX04750.1;Parent=gene-NM058_17680;Dbxref=NCBI_GP:UTX04750.1;Name=UTX04750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388706.1;locus_tag=NM058_17680;product=AraC family transcriptional regulator;protein_id=UTX04750.1;transl_table=11 CP101611.1 Genbank gene 3412416 3413273 . - . ID=gene-NM058_17685;Name=catE;gbkey=Gene;gene=catE;gene_biotype=protein_coding;locus_tag=NM058_17685 CP101611.1 Protein Homology CDS 3412416 3413273 . - 0 ID=cds-UTX04751.1;Parent=gene-NM058_17685;Dbxref=NCBI_GP:UTX04751.1;Name=UTX04751.1;gbkey=CDS;gene=catE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388705.2;locus_tag=NM058_17685;product=catechol 2%2C3-dioxygenase;protein_id=UTX04751.1;transl_table=11 CP101611.1 Genbank gene 3413291 3413695 . - . ID=gene-NM058_17690;Name=catD;gbkey=Gene;gene=catD;gene_biotype=protein_coding;locus_tag=NM058_17690 CP101611.1 Protein Homology CDS 3413291 3413695 . - 0 ID=cds-UTX04752.1;Parent=gene-NM058_17690;Dbxref=NCBI_GP:UTX04752.1;Name=UTX04752.1;gbkey=CDS;gene=catD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388704.1;locus_tag=NM058_17690;product=DoxX family oxidoreductase CatD;protein_id=UTX04752.1;transl_table=11 CP101611.1 Genbank pseudogene 3413849 3415660 . - . ID=gene-NM058_17695;Name=NM058_17695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17695;pseudo=true CP101611.1 Protein Homology CDS 3413849 3415660 . - 0 ID=cds-NM058_17695;Parent=gene-NM058_17695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388703.1;locus_tag=NM058_17695;product=ABC transporter ATP-binding protein/permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3415654 3417375 . - . ID=gene-NM058_17700;Name=NM058_17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17700 CP101611.1 Protein Homology CDS 3415654 3417375 . - 0 ID=cds-UTX04753.1;Parent=gene-NM058_17700;Dbxref=NCBI_GP:UTX04753.1;Name=UTX04753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388702.1;locus_tag=NM058_17700;product=ABC transporter ATP-binding protein/permease;protein_id=UTX04753.1;transl_table=11 CP101611.1 Genbank gene 3417481 3419064 . - . ID=gene-NM058_17705;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=NM058_17705 CP101611.1 Protein Homology CDS 3417481 3419064 . - 0 ID=cds-UTX04754.1;Parent=gene-NM058_17705;Dbxref=NCBI_GP:UTX04754.1;Name=UTX04754.1;gbkey=CDS;gene=malP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388701.1;locus_tag=NM058_17705;product=PTS maltose transporter subunit IIBC;protein_id=UTX04754.1;transl_table=11 CP101611.1 Genbank pseudogene 3419079 3419842 . - . ID=gene-NM058_17710;Name=glvR;gbkey=Gene;gene=glvR;gene_biotype=pseudogene;locus_tag=NM058_17710;pseudo=true CP101611.1 Protein Homology CDS 3419079 3419842 . - 0 ID=cds-NM058_17710;Parent=gene-NM058_17710;Note=frameshifted;gbkey=CDS;gene=glvR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388700.1;locus_tag=NM058_17710;product=MurR/RpiR family transcriptional regulator GlvR;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3419907 3421256 . - . ID=gene-NM058_17715;Name=glvA;gbkey=Gene;gene=glvA;gene_biotype=protein_coding;locus_tag=NM058_17715 CP101611.1 Protein Homology CDS 3419907 3421256 . - 0 ID=cds-UTX04755.1;Parent=gene-NM058_17715;Dbxref=NCBI_GP:UTX04755.1;Name=UTX04755.1;gbkey=CDS;gene=glvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388699.1;locus_tag=NM058_17715;product=maltose-6'-phosphate glucosidase;protein_id=UTX04755.1;transl_table=11 CP101611.1 Genbank gene 3421591 3421905 . + . ID=gene-NM058_17720;Name=NM058_17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17720 CP101611.1 Protein Homology CDS 3421591 3421905 . + 0 ID=cds-UTX04756.1;Parent=gene-NM058_17720;Dbxref=NCBI_GP:UTX04756.1;Name=UTX04756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010330896.1;locus_tag=NM058_17720;product=WXG100 family type VII secretion target;protein_id=UTX04756.1;transl_table=11 CP101611.1 Genbank gene 3421911 3423134 . + . ID=gene-NM058_17725;Name=NM058_17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17725 CP101611.1 Protein Homology CDS 3421911 3423134 . + 0 ID=cds-UTX04757.1;Parent=gene-NM058_17725;Dbxref=NCBI_GP:UTX04757.1;Name=UTX04757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388697.1;locus_tag=NM058_17725;product=hypothetical protein;protein_id=UTX04757.1;transl_table=11 CP101611.1 Genbank gene 3423146 3423913 . + . ID=gene-NM058_17730;Name=NM058_17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17730 CP101611.1 Protein Homology CDS 3423146 3423913 . + 0 ID=cds-UTX04758.1;Parent=gene-NM058_17730;Dbxref=NCBI_GP:UTX04758.1;Name=UTX04758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019713647.1;locus_tag=NM058_17730;product=hypothetical protein;protein_id=UTX04758.1;transl_table=11 CP101611.1 Genbank gene 3423937 3424494 . + . ID=gene-NM058_17735;Name=NM058_17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17735 CP101611.1 Protein Homology CDS 3423937 3424494 . + 0 ID=cds-UTX04759.1;Parent=gene-NM058_17735;Dbxref=NCBI_GP:UTX04759.1;Name=UTX04759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017696479.1;locus_tag=NM058_17735;product=YfjD family protein;protein_id=UTX04759.1;transl_table=11 CP101611.1 Genbank gene 3424544 3424873 . + . ID=gene-NM058_17740;Name=NM058_17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17740 CP101611.1 Protein Homology CDS 3424544 3424873 . + 0 ID=cds-UTX04760.1;Parent=gene-NM058_17740;Dbxref=NCBI_GP:UTX04760.1;Name=UTX04760.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388693.1;locus_tag=NM058_17740;product=YnfA family protein;protein_id=UTX04760.1;transl_table=11 CP101611.1 Genbank gene 3424909 3425088 . - . ID=gene-NM058_17745;Name=NM058_17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17745 CP101611.1 Protein Homology CDS 3424909 3425088 . - 0 ID=cds-UTX04761.1;Parent=gene-NM058_17745;Dbxref=NCBI_GP:UTX04761.1;Name=UTX04761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388692.1;locus_tag=NM058_17745;product=small acid-soluble spore protein H;protein_id=UTX04761.1;transl_table=11 CP101611.1 Genbank pseudogene 3425141 3426956 . - . ID=gene-NM058_17750;Name=NM058_17750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17750;pseudo=true CP101611.1 Protein Homology CDS 3425141 3426956 . - 0 ID=cds-NM058_17750;Parent=gene-NM058_17750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388691.1;locus_tag=NM058_17750;product=sigma-54-dependent Fis family transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3427072 3428449 . - . ID=gene-NM058_17755;Name=acoL;gbkey=Gene;gene=acoL;gene_biotype=pseudogene;locus_tag=NM058_17755;pseudo=true CP101611.1 Protein Homology CDS 3427072 3428449 . - 0 ID=cds-NM058_17755;Parent=gene-NM058_17755;Note=frameshifted;gbkey=CDS;gene=acoL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388690.1;locus_tag=NM058_17755;product=acetoin dehydrogenase complex dihydrolipoyl dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3428470 3429666 . - . ID=gene-NM058_17760;Name=acoC;gbkey=Gene;gene=acoC;gene_biotype=protein_coding;locus_tag=NM058_17760 CP101611.1 Protein Homology CDS 3428470 3429666 . - 0 ID=cds-UTX04762.1;Parent=gene-NM058_17760;Dbxref=NCBI_GP:UTX04762.1;Name=UTX04762.1;gbkey=CDS;gene=acoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388689.1;locus_tag=NM058_17760;product=acetoin dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=UTX04762.1;transl_table=11 CP101611.1 Genbank gene 3429680 3430708 . - . ID=gene-NM058_17765;Name=acoB;gbkey=Gene;gene=acoB;gene_biotype=protein_coding;locus_tag=NM058_17765 CP101611.1 Protein Homology CDS 3429680 3430708 . - 0 ID=cds-UTX04763.1;Parent=gene-NM058_17765;Dbxref=NCBI_GP:UTX04763.1;Name=UTX04763.1;gbkey=CDS;gene=acoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388688.1;locus_tag=NM058_17765;product=acetoin:2%2C6-dichlorophenolindophenol oxidoreductase subunit beta;protein_id=UTX04763.1;transl_table=11 CP101611.1 Genbank gene 3430710 3431711 . - . ID=gene-NM058_17770;Name=acoA;gbkey=Gene;gene=acoA;gene_biotype=protein_coding;locus_tag=NM058_17770 CP101611.1 Protein Homology CDS 3430710 3431711 . - 0 ID=cds-UTX04764.1;Parent=gene-NM058_17770;Dbxref=NCBI_GP:UTX04764.1;Name=UTX04764.1;gbkey=CDS;gene=acoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388687.1;locus_tag=NM058_17770;product=acetoin:2%2C6-dichlorophenolindophenol oxidoreductase subunit alpha;protein_id=UTX04764.1;transl_table=11 CP101611.1 Genbank pseudogene 3431972 3432079 . - . ID=gene-NM058_17775;Name=NM058_17775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17775;pseudo=true CP101611.1 Protein Homology CDS 3431972 3432079 . - 0 ID=cds-NM058_17775;Parent=gene-NM058_17775;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388686.1;locus_tag=NM058_17775;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3432109 3432561 . - . ID=gene-NM058_17780;Name=NM058_17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17780 CP101611.1 Protein Homology CDS 3432109 3432561 . - 0 ID=cds-UTX04765.1;Parent=gene-NM058_17780;Dbxref=NCBI_GP:UTX04765.1;Name=UTX04765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388685.1;locus_tag=NM058_17780;product=hypothetical protein;protein_id=UTX04765.1;transl_table=11 CP101611.1 Genbank gene 3432655 3433911 . - . ID=gene-NM058_17785;Name=NM058_17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17785 CP101611.1 Protein Homology CDS 3432655 3433911 . - 0 ID=cds-UTX04766.1;Parent=gene-NM058_17785;Dbxref=NCBI_GP:UTX04766.1;Name=UTX04766.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003239809.1;locus_tag=NM058_17785;product=amidohydrolase;protein_id=UTX04766.1;transl_table=11 CP101611.1 Genbank gene 3433893 3435464 . - . ID=gene-NM058_17790;Name=NM058_17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17790 CP101611.1 Protein Homology CDS 3433893 3435464 . - 0 ID=cds-UTX04767.1;Parent=gene-NM058_17790;Dbxref=NCBI_GP:UTX04767.1;Name=UTX04767.1;Ontology_term=GO:1902604,GO:0015558;gbkey=CDS;go_function=secondary active p-aminobenzoyl-glutamate transmembrane transporter activity|0015558||IEA;go_process=p-aminobenzoyl-glutamate transmembrane transport|1902604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003239811.1;locus_tag=NM058_17790;product=AbgT family transporter;protein_id=UTX04767.1;transl_table=11 CP101611.1 Genbank pseudogene 3435486 3436645 . - . ID=gene-NM058_17795;Name=NM058_17795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17795;pseudo=true CP101611.1 Protein Homology CDS 3435486 3436645 . - 0 ID=cds-NM058_17795;Parent=gene-NM058_17795;Note=frameshifted;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257796.1;locus_tag=NM058_17795;product=amidohydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3436791 3437774 . - . ID=gene-NM058_17800;Name=NM058_17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17800 CP101611.1 Protein Homology CDS 3436791 3437774 . - 0 ID=cds-UTX07089.1;Parent=gene-NM058_17800;Dbxref=NCBI_GP:UTX07089.1;Name=UTX07089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007408522.1;locus_tag=NM058_17800;product=tRNA-dihydrouridine synthase;protein_id=UTX07089.1;transl_table=11 CP101611.1 Genbank pseudogene 3438227 3439626 . - . ID=gene-NM058_17805;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=pseudogene;locus_tag=NM058_17805;pseudo=true CP101611.1 Protein Homology CDS 3438227 3439626 . - 0 ID=cds-NM058_17805;Parent=gene-NM058_17805;Note=frameshifted;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388683.1;locus_tag=NM058_17805;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3439741 3440604 . - . ID=gene-NM058_17810;Name=NM058_17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17810 CP101611.1 Protein Homology CDS 3439741 3440604 . - 0 ID=cds-UTX04768.1;Parent=gene-NM058_17810;Dbxref=NCBI_GP:UTX04768.1;Name=UTX04768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388682.1;locus_tag=NM058_17810;product=DNA-3-methyladenine glycosylase;protein_id=UTX04768.1;transl_table=11 CP101611.1 Genbank gene 3440723 3441682 . + . ID=gene-NM058_17815;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=NM058_17815 CP101611.1 Protein Homology CDS 3440723 3441682 . + 0 ID=cds-UTX04769.1;Parent=gene-NM058_17815;Dbxref=NCBI_GP:UTX04769.1;Name=UTX04769.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095;gbkey=CDS;gene=corA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388681.1;locus_tag=NM058_17815;product=magnesium/cobalt transporter CorA;protein_id=UTX04769.1;transl_table=11 CP101611.1 Genbank pseudogene 3441766 3442627 . + . ID=gene-NM058_17820;Name=NM058_17820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17820;pseudo=true CP101611.1 Protein Homology CDS 3441766 3442627 . + 0 ID=cds-NM058_17820;Parent=gene-NM058_17820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388680.2;locus_tag=NM058_17820;product=NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3442665 3443455 . - . ID=gene-NM058_17825;Name=pdaA;gbkey=Gene;gene=pdaA;gene_biotype=pseudogene;locus_tag=NM058_17825;pseudo=true CP101611.1 Protein Homology CDS 3442665 3443455 . - 0 ID=cds-NM058_17825;Parent=gene-NM058_17825;Note=frameshifted;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;gene=pdaA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388679.1;locus_tag=NM058_17825;product=delta-lactam-biosynthetic de-N-acetylase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3443555 3443740 . - . ID=gene-NM058_17830;Name=NM058_17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17830 CP101611.1 Protein Homology CDS 3443555 3443740 . - 0 ID=cds-UTX04770.1;Parent=gene-NM058_17830;Dbxref=NCBI_GP:UTX04770.1;Name=UTX04770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388678.1;locus_tag=NM058_17830;product=SE1561 family protein;protein_id=UTX04770.1;transl_table=11 CP101611.1 Genbank gene 3443886 3445007 . + . ID=gene-NM058_17835;Name=yfkAB;gbkey=Gene;gene=yfkAB;gene_biotype=protein_coding;locus_tag=NM058_17835 CP101611.1 Protein Homology CDS 3443886 3445007 . + 0 ID=cds-UTX04771.1;Parent=gene-NM058_17835;Dbxref=NCBI_GP:UTX04771.1;Name=UTX04771.1;Ontology_term=GO:0008152,GO:0051539,GO:1904047;gbkey=CDS;gene=yfkAB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388677.2;locus_tag=NM058_17835;product=radical SAM/CxCxxxxC motif protein YfkAB;protein_id=UTX04771.1;transl_table=11 CP101611.1 Genbank gene 3445008 3445850 . + . ID=gene-NM058_17840;Name=mscC;gbkey=Gene;gene=mscC;gene_biotype=protein_coding;gene_synonym=yfkC;locus_tag=NM058_17840 CP101611.1 Protein Homology CDS 3445008 3445850 . + 0 ID=cds-UTX04772.1;Parent=gene-NM058_17840;Dbxref=NCBI_GP:UTX04772.1;Name=UTX04772.1;gbkey=CDS;gene=mscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388675.1;locus_tag=NM058_17840;product=mechanosensitive ion channel protein MscC;protein_id=UTX04772.1;transl_table=11 CP101611.1 Genbank gene 3445889 3446683 . - . ID=gene-NM058_17845;Name=NM058_17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17845 CP101611.1 Protein Homology CDS 3445889 3446683 . - 0 ID=cds-UTX04773.1;Parent=gene-NM058_17845;Dbxref=NCBI_GP:UTX04773.1;Name=UTX04773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388674.1;locus_tag=NM058_17845;product=YfkD family protein;protein_id=UTX04773.1;transl_table=11 CP101611.1 Genbank pseudogene 3446754 3447808 . - . ID=gene-NM058_17850;Name=cax;gbkey=Gene;gene=cax;gene_biotype=pseudogene;locus_tag=NM058_17850;pseudo=true CP101611.1 Protein Homology CDS 3446754 3447808 . - 0 ID=cds-NM058_17850;Parent=gene-NM058_17850;Note=frameshifted;Ontology_term=GO:0006816,GO:0015368;gbkey=CDS;gene=cax;go_function=calcium:cation antiporter activity|0015368||IEA;go_process=calcium ion transport|0006816||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388673.1;locus_tag=NM058_17850;product=calcium/proton exchanger;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3447884 3449151 . + . ID=gene-NM058_17855;Name=NM058_17855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17855;pseudo=true CP101611.1 Protein Homology CDS 3447884 3449151 . + 0 ID=cds-NM058_17855;Parent=gene-NM058_17855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014906210.1;locus_tag=NM058_17855;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3449350 3450176 . - . ID=gene-NM058_17860;Name=NM058_17860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17860;pseudo=true CP101611.1 Protein Homology CDS 3449350 3450176 . - 0 ID=cds-NM058_17860;Parent=gene-NM058_17860;Note=frameshifted;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388671.1;locus_tag=NM058_17860;product=YihY family inner membrane protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3450200 3450520 . - . ID=gene-NM058_17865;Name=NM058_17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17865 CP101611.1 Protein Homology CDS 3450200 3450520 . - 0 ID=cds-UTX04774.1;Parent=gene-NM058_17865;Dbxref=NCBI_GP:UTX04774.1;Name=UTX04774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388670.1;locus_tag=NM058_17865;product=hypothetical protein;protein_id=UTX04774.1;transl_table=11 CP101611.1 Genbank gene 3450538 3451008 . - . ID=gene-NM058_17870;Name=yfkJ;gbkey=Gene;gene=yfkJ;gene_biotype=protein_coding;locus_tag=NM058_17870 CP101611.1 Protein Homology CDS 3450538 3451008 . - 0 ID=cds-UTX04775.1;Parent=gene-NM058_17870;Dbxref=NCBI_GP:UTX04775.1;Name=UTX04775.1;gbkey=CDS;gene=yfkJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388669.1;locus_tag=NM058_17870;product=protein-tyrosine-phosphatase;protein_id=UTX04775.1;transl_table=11 CP101611.1 Genbank gene 3451212 3451427 . + . ID=gene-NM058_17875;Name=NM058_17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17875 CP101611.1 Protein Homology CDS 3451212 3451427 . + 0 ID=cds-UTX04776.1;Parent=gene-NM058_17875;Dbxref=NCBI_GP:UTX04776.1;Name=UTX04776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388668.1;locus_tag=NM058_17875;product=DUF1128 domain-containing protein;protein_id=UTX04776.1;transl_table=11 CP101611.1 Genbank gene 3451638 3452834 . + . ID=gene-NM058_17880;Name=NM058_17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17880 CP101611.1 Protein Homology CDS 3451638 3452834 . + 0 ID=cds-UTX04777.1;Parent=gene-NM058_17880;Dbxref=NCBI_GP:UTX04777.1;Name=UTX04777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003239847.1;locus_tag=NM058_17880;product=MFS transporter;protein_id=UTX04777.1;transl_table=11 CP101611.1 Genbank pseudogene 3452869 3453386 . - . ID=gene-NM058_17885;Name=yfkM;gbkey=Gene;gene=yfkM;gene_biotype=pseudogene;gene_synonym=sufLB;locus_tag=NM058_17885;pseudo=true CP101611.1 Protein Homology CDS 3452869 3453386 . - 0 ID=cds-NM058_17885;Parent=gene-NM058_17885;Note=frameshifted;gbkey=CDS;gene=yfkM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388666.1;locus_tag=NM058_17885;product=general stress protein 18;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3453629 3458017 . + . ID=gene-NM058_17890;Name=NM058_17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17890 CP101611.1 Protein Homology CDS 3453629 3458017 . + 0 ID=cds-UTX04778.1;Parent=gene-NM058_17890;Dbxref=NCBI_GP:UTX04778.1;Name=UTX04778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388665.1;locus_tag=NM058_17890;product=multifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase/5'-nucleotidase;protein_id=UTX04778.1;transl_table=11 CP101611.1 Genbank gene 3458052 3458717 . - . ID=gene-NM058_17895;Name=NM058_17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17895 CP101611.1 Protein Homology CDS 3458052 3458717 . - 0 ID=cds-UTX04779.1;Parent=gene-NM058_17895;Dbxref=NCBI_GP:UTX04779.1;Name=UTX04779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388664.1;locus_tag=NM058_17895;product=NAD(P)H-dependent oxidoreductase;protein_id=UTX04779.1;transl_table=11 CP101611.1 Genbank gene 3458858 3459574 . - . ID=gene-NM058_17900;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=NM058_17900 CP101611.1 Protein Homology CDS 3458858 3459574 . - 0 ID=cds-UTX04780.1;Parent=gene-NM058_17900;Dbxref=NCBI_GP:UTX04780.1;Name=UTX04780.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388663.1;locus_tag=NM058_17900;product=trehalose operon repressor;protein_id=UTX04780.1;transl_table=11 CP101611.1 Genbank pseudogene 3459595 3461282 . - . ID=gene-NM058_17905;Name=treC;gbkey=Gene;gene=treC;gene_biotype=pseudogene;locus_tag=NM058_17905;pseudo=true CP101611.1 Protein Homology CDS 3459595 3461282 . - 0 ID=cds-NM058_17905;Parent=gene-NM058_17905;Note=frameshifted;Ontology_term=GO:0005991,GO:0008788;gbkey=CDS;gene=treC;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388662.1;locus_tag=NM058_17905;product=alpha%2Calpha-phosphotrehalase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3461353 3462765 . - . ID=gene-NM058_17910;Name=treP;gbkey=Gene;gene=treP;gene_biotype=protein_coding;locus_tag=NM058_17910 CP101611.1 Protein Homology CDS 3461353 3462765 . - 0 ID=cds-UTX04781.1;Parent=gene-NM058_17910;Dbxref=NCBI_GP:UTX04781.1;Name=UTX04781.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016021;gbkey=CDS;gene=treP;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388661.1;locus_tag=NM058_17910;product=PTS system trehalose-specific EIIBC component;protein_id=UTX04781.1;transl_table=11 CP101611.1 Genbank pseudogene 3462988 3463344 . + . ID=gene-NM058_17915;Name=NM058_17915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17915;pseudo=true CP101611.1 Protein Homology CDS 3462988 3463344 . + 0 ID=cds-NM058_17915;Parent=gene-NM058_17915;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0009847,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_process=spore germination|0009847||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388660.1;locus_tag=NM058_17915;product=spore germination protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3463361 3463586 . + . ID=gene-NM058_17920;Name=NM058_17920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17920;pseudo=true CP101611.1 Protein Homology CDS 3463361 3463586 . + 0 ID=cds-NM058_17920;Parent=gene-NM058_17920;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388657.1;locus_tag=NM058_17920;product=spore gernimation protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3463583 3464997 . - . ID=gene-NM058_17925;Name=NM058_17925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17925;pseudo=true CP101611.1 Protein Homology CDS 3463583 3464997 . - 0 ID=cds-NM058_17925;Parent=gene-NM058_17925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388656.1;locus_tag=NM058_17925;product=sodium:alanine symporter family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3465127 3465519 . - . ID=gene-NM058_17930;Name=NM058_17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17930 CP101611.1 Protein Homology CDS 3465127 3465519 . - 0 ID=cds-UTX04782.1;Parent=gene-NM058_17930;Dbxref=NCBI_GP:UTX04782.1;Name=UTX04782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388655.2;locus_tag=NM058_17930;product=DUF1992 domain-containing protein;protein_id=UTX04782.1;transl_table=11 CP101611.1 Genbank gene 3465777 3467726 . + . ID=gene-NM058_17935;Name=ltaS;gbkey=Gene;gene=ltaS;gene_biotype=protein_coding;gene_synonym=yflE;locus_tag=NM058_17935 CP101611.1 Protein Homology CDS 3465777 3467726 . + 0 ID=cds-UTX04783.1;Parent=gene-NM058_17935;Dbxref=NCBI_GP:UTX04783.1;Name=UTX04783.1;gbkey=CDS;gene=ltaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388652.1;locus_tag=NM058_17935;product=lipoteichoic acid synthase;protein_id=UTX04783.1;transl_table=11 CP101611.1 Genbank gene 3467765 3469117 . - . ID=gene-NM058_17940;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=NM058_17940 CP101611.1 Protein Homology CDS 3467765 3469117 . - 0 ID=cds-UTX04784.1;Parent=gene-NM058_17940;Dbxref=NCBI_GP:UTX04784.1;Name=UTX04784.1;Ontology_term=GO:0015572;gbkey=CDS;gene=nagE;go_function=N-acetylglucosamine transmembrane transporter activity|0015572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388651.1;locus_tag=NM058_17940;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=UTX04784.1;transl_table=11 CP101611.1 Genbank pseudogene 3469287 3470035 . + . ID=gene-NM058_17945;Name=map;gbkey=Gene;gene=map;gene_biotype=pseudogene;locus_tag=NM058_17945;pseudo=true CP101611.1 Protein Homology CDS 3469287 3470035 . + 0 ID=cds-NM058_17945;Parent=gene-NM058_17945;Note=frameshifted;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388650.1;locus_tag=NM058_17945;product=type I methionyl aminopeptidase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3470117 3470431 . + . ID=gene-NM058_17950;Name=NM058_17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17950 CP101611.1 Protein Homology CDS 3470117 3470431 . + 0 ID=cds-UTX04785.1;Parent=gene-NM058_17950;Dbxref=NCBI_GP:UTX04785.1;Name=UTX04785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388649.1;locus_tag=NM058_17950;product=DUF3243 domain-containing protein;protein_id=UTX04785.1;transl_table=11 CP101611.1 Genbank pseudogene 3470541 3470695 . + . ID=gene-NM058_17955;Name=NM058_17955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17955;pseudo=true CP101611.1 Protein Homology CDS 3470541 3470695 . + 0 ID=cds-NM058_17955;Parent=gene-NM058_17955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388648.1;locus_tag=NM058_17955;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3470851 3470988 . + . ID=gene-NM058_17960;Name=NM058_17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17960 CP101611.1 Protein Homology CDS 3470851 3470988 . + 0 ID=cds-UTX04786.1;Parent=gene-NM058_17960;Dbxref=NCBI_GP:UTX04786.1;Name=UTX04786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388647.1;locus_tag=NM058_17960;product=YflJ family protein;protein_id=UTX04786.1;transl_table=11 CP101611.1 Genbank gene 3471033 3471692 . - . ID=gene-NM058_17965;Name=NM058_17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17965 CP101611.1 Protein Homology CDS 3471033 3471692 . - 0 ID=cds-UTX04787.1;Parent=gene-NM058_17965;Dbxref=NCBI_GP:UTX04787.1;Name=UTX04787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388646.1;locus_tag=NM058_17965;product=MOSC domain-containing protein;protein_id=UTX04787.1;transl_table=11 CP101611.1 Genbank pseudogene 3471759 3472033 . + . ID=gene-NM058_17970;Name=NM058_17970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_17970;pseudo=true CP101611.1 Protein Homology CDS 3471759 3472033 . + 0 ID=cds-NM058_17970;Parent=gene-NM058_17970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388645.1;locus_tag=NM058_17970;product=acylphosphatase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3472024 3473115 . - . ID=gene-NM058_17975;Name=nosA;gbkey=Gene;gene=nosA;gene_biotype=protein_coding;locus_tag=NM058_17975 CP101611.1 Protein Homology CDS 3472024 3473115 . - 0 ID=cds-UTX04788.1;Parent=gene-NM058_17975;Dbxref=NCBI_GP:UTX04788.1;Name=UTX04788.1;gbkey=CDS;gene=nosA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388644.2;locus_tag=NM058_17975;product=nitric oxide synthase;protein_id=UTX04788.1;transl_table=11 CP101611.1 Genbank gene 3473235 3474029 . - . ID=gene-NM058_17980;Name=NM058_17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17980 CP101611.1 Protein Homology CDS 3473235 3474029 . - 0 ID=cds-UTX04789.1;Parent=gene-NM058_17980;Dbxref=NCBI_GP:UTX04789.1;Name=UTX04789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388643.1;locus_tag=NM058_17980;product=MBL fold metallo-hydrolase;protein_id=UTX04789.1;transl_table=11 CP101611.1 Genbank gene 3474085 3475386 . - . ID=gene-NM058_17985;Name=citM;gbkey=Gene;gene=citM;gene_biotype=protein_coding;locus_tag=NM058_17985 CP101611.1 Protein Homology CDS 3474085 3475386 . - 0 ID=cds-UTX04790.1;Parent=gene-NM058_17985;Dbxref=NCBI_GP:UTX04790.1;Name=UTX04790.1;gbkey=CDS;gene=citM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388642.1;locus_tag=NM058_17985;product=citrate transporter CitM;protein_id=UTX04790.1;transl_table=11 CP101611.1 Genbank gene 3475584 3476543 . - . ID=gene-NM058_17990;Name=NM058_17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_17990 CP101611.1 Protein Homology CDS 3475584 3476543 . - 0 ID=cds-UTX04791.1;Parent=gene-NM058_17990;Dbxref=NCBI_GP:UTX04791.1;Name=UTX04791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388641.2;locus_tag=NM058_17990;product=tripartite tricarboxylate transporter substrate binding protein;protein_id=UTX04791.1;transl_table=11 CP101611.1 Genbank gene 3476546 3477226 . - . ID=gene-NM058_17995;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;gene_synonym=yflQ;locus_tag=NM058_17995 CP101611.1 Protein Homology CDS 3476546 3477226 . - 0 ID=cds-UTX04792.1;Parent=gene-NM058_17995;Dbxref=NCBI_GP:UTX04792.1;Name=UTX04792.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388640.1;locus_tag=NM058_17995;product=two-component response regulator CitT;protein_id=UTX04792.1;transl_table=11 CP101611.1 Genbank pseudogene 3477198 3478823 . - . ID=gene-NM058_18000;Name=yflR;gbkey=Gene;gene=yflR;gene_biotype=pseudogene;locus_tag=NM058_18000;pseudo=true CP101611.1 Protein Homology CDS 3477198 3478823 . - 0 ID=cds-NM058_18000;Parent=gene-NM058_18000;Note=frameshifted;gbkey=CDS;gene=yflR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388639.1;locus_tag=NM058_18000;product=two-component sensor histidine kinase CitS;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3478979 3480415 . - . ID=gene-NM058_18005;Name=NM058_18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18005 CP101611.1 Protein Homology CDS 3478979 3480415 . - 0 ID=cds-UTX04793.1;Parent=gene-NM058_18005;Dbxref=NCBI_GP:UTX04793.1;Name=UTX04793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388638.1;locus_tag=NM058_18005;product=anion permease;protein_id=UTX04793.1;transl_table=11 CP101611.1 Genbank gene 3480543 3481805 . - . ID=gene-NM058_18010;Name=NM058_18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18010 CP101611.1 Protein Homology CDS 3480543 3481805 . - 0 ID=cds-UTX04794.1;Parent=gene-NM058_18010;Dbxref=NCBI_GP:UTX04794.1;Name=UTX04794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388637.1;locus_tag=NM058_18010;product=pectate lyase;protein_id=UTX04794.1;transl_table=11 CP101611.1 Genbank gene 3481998 3482345 . - . ID=gene-NM058_18015;Name=NM058_18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18015 CP101611.1 Protein Homology CDS 3481998 3482345 . - 0 ID=cds-UTX04795.1;Parent=gene-NM058_18015;Dbxref=NCBI_GP:UTX04795.1;Name=UTX04795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388636.1;locus_tag=NM058_18015;product=general stress protein;protein_id=UTX04795.1;transl_table=11 CP101611.1 Genbank gene 3482589 3482957 . + . ID=gene-NM058_18020;Name=NM058_18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18020 CP101611.1 Protein Homology CDS 3482589 3482957 . + 0 ID=cds-UTX04796.1;Parent=gene-NM058_18020;Dbxref=NCBI_GP:UTX04796.1;Name=UTX04796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388634.1;locus_tag=NM058_18020;product=YfmB family protein;protein_id=UTX04796.1;transl_table=11 CP101611.1 Genbank gene 3483067 3484014 . + . ID=gene-NM058_18025;Name=yfmC;gbkey=Gene;gene=yfmC;gene_biotype=protein_coding;locus_tag=NM058_18025 CP101611.1 Protein Homology CDS 3483067 3484014 . + 0 ID=cds-UTX04797.1;Parent=gene-NM058_18025;Dbxref=NCBI_GP:UTX04797.1;Name=UTX04797.1;gbkey=CDS;gene=yfmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388633.1;locus_tag=NM058_18025;product=Fe(3+)-citrate ABC transporter substrate-binding protein YfmC;protein_id=UTX04797.1;transl_table=11 CP101611.1 Genbank gene 3484086 3485087 . + . ID=gene-NM058_18030;Name=fecD;gbkey=Gene;gene=fecD;gene_biotype=protein_coding;locus_tag=NM058_18030 CP101611.1 Protein Homology CDS 3484086 3485087 . + 0 ID=cds-UTX04798.1;Parent=gene-NM058_18030;Dbxref=NCBI_GP:UTX04798.1;Name=UTX04798.1;gbkey=CDS;gene=fecD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388632.1;locus_tag=NM058_18030;product=Fe(3+) dicitrate ABC transporter permease FecD;protein_id=UTX04798.1;transl_table=11 CP101611.1 Genbank gene 3485084 3486085 . + . ID=gene-NM058_18035;Name=yfmE;gbkey=Gene;gene=yfmE;gene_biotype=protein_coding;locus_tag=NM058_18035 CP101611.1 Protein Homology CDS 3485084 3486085 . + 0 ID=cds-UTX04799.1;Parent=gene-NM058_18035;Dbxref=NCBI_GP:UTX04799.1;Name=UTX04799.1;gbkey=CDS;gene=yfmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388631.1;locus_tag=NM058_18035;product=Fe(3+)-citrate ABC transporter permease YfmE;protein_id=UTX04799.1;transl_table=11 CP101611.1 Genbank pseudogene 3486098 3486894 . + . ID=gene-NM058_18040;Name=yfmF;gbkey=Gene;gene=yfmF;gene_biotype=pseudogene;locus_tag=NM058_18040;pseudo=true CP101611.1 Protein Homology CDS 3486098 3486894 . + 0 ID=cds-NM058_18040;Parent=gene-NM058_18040;Note=frameshifted;gbkey=CDS;gene=yfmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003223014.1;locus_tag=NM058_18040;product=Fe(3+)-citrate ABC transporter ATP-binding protein YfmF;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3487002 3488021 . + . ID=gene-NM058_18045;Name=NM058_18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18045 CP101611.1 Protein Homology CDS 3487002 3488021 . + 0 ID=cds-UTX04800.1;Parent=gene-NM058_18045;Dbxref=NCBI_GP:UTX04800.1;Name=UTX04800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388626.1;locus_tag=NM058_18045;product=NADP-dependent oxidoreductase;protein_id=UTX04800.1;transl_table=11 CP101611.1 Genbank gene 3488076 3488522 . - . ID=gene-NM058_18050;Name=NM058_18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18050 CP101611.1 Protein Homology CDS 3488076 3488522 . - 0 ID=cds-UTX04801.1;Parent=gene-NM058_18050;Dbxref=NCBI_GP:UTX04801.1;Name=UTX04801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015383073.1;locus_tag=NM058_18050;product=GNAT family N-acetyltransferase;protein_id=UTX04801.1;transl_table=11 CP101611.1 Genbank pseudogene 3488591 3489720 . - . ID=gene-NM058_18055;Name=NM058_18055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18055;pseudo=true CP101611.1 Protein Homology CDS 3488591 3489720 . - 0 ID=cds-NM058_18055;Parent=gene-NM058_18055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388624.1;locus_tag=NM058_18055;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3489895 3491450 . + . ID=gene-NM058_18060;Name=NM058_18060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18060;pseudo=true CP101611.1 Protein Homology CDS 3489895 3491450 . + 0 ID=cds-NM058_18060;Parent=gene-NM058_18060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388623.2;locus_tag=NM058_18060;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3491615 3492804 . - . ID=gene-NM058_18065;Name=NM058_18065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18065;pseudo=true CP101611.1 Protein Homology CDS 3491615 3492804 . - 0 ID=cds-NM058_18065;Parent=gene-NM058_18065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388621.1;locus_tag=NM058_18065;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3492870 3493292 . - . ID=gene-NM058_18070;Name=NM058_18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18070 CP101611.1 Protein Homology CDS 3492870 3493292 . - 0 ID=cds-UTX04802.1;Parent=gene-NM058_18070;Dbxref=NCBI_GP:UTX04802.1;Name=UTX04802.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388620.1;locus_tag=NM058_18070;product=MerR family transcriptional regulator;protein_id=UTX04802.1;transl_table=11 CP101611.1 Genbank pseudogene 3493413 3493818 . - . ID=gene-NM058_18075;Name=NM058_18075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18075;pseudo=true CP101611.1 Protein Homology CDS 3493413 3493818 . - 0 ID=cds-NM058_18075;Parent=gene-NM058_18075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388619.1;locus_tag=NM058_18075;product=YfmQ family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3493757 3493897 . - . ID=gene-NM058_18080;Name=NM058_18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18080 CP101611.1 GeneMarkS-2+ CDS 3493757 3493897 . - 0 ID=cds-UTX07128.1;Parent=gene-NM058_18080;Dbxref=NCBI_GP:UTX07128.1;Name=UTX07128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_18080;product=hypothetical protein;protein_id=UTX07128.1;transl_table=11 CP101611.1 Genbank pseudogene 3493981 3495870 . - . ID=gene-NM058_18085;Name=NM058_18085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18085;pseudo=true CP101611.1 Protein Homology CDS 3493981 3495870 . - 0 ID=cds-NM058_18085;Parent=gene-NM058_18085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388618.1;locus_tag=NM058_18085;product=ABC-F family ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3496005 3496865 . - . ID=gene-NM058_18090;Name=NM058_18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18090 CP101611.1 Protein Homology CDS 3496005 3496865 . - 0 ID=cds-UTX04803.1;Parent=gene-NM058_18090;Dbxref=NCBI_GP:UTX04803.1;Name=UTX04803.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388617.1;locus_tag=NM058_18090;product=methyl-accepting chemotaxis protein;protein_id=UTX04803.1;transl_table=11 CP101611.1 Genbank pseudogene 3496879 3498333 . - . ID=gene-NM058_18095;Name=yfmT;gbkey=Gene;gene=yfmT;gene_biotype=pseudogene;locus_tag=NM058_18095;pseudo=true CP101611.1 Protein Homology CDS 3496879 3498333 . - 0 ID=cds-NM058_18095;Parent=gene-NM058_18095;Note=frameshifted;gbkey=CDS;gene=yfmT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388616.1;locus_tag=NM058_18095;product=benzaldehyde dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3498581 3499966 . + . ID=gene-NM058_18100;Name=NM058_18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18100 CP101611.1 Protein Homology CDS 3498581 3499966 . + 0 ID=cds-UTX04804.1;Parent=gene-NM058_18100;Dbxref=NCBI_GP:UTX04804.1;Name=UTX04804.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388615.1;locus_tag=NM058_18100;product=amino acid permease;protein_id=UTX04804.1;transl_table=11 CP101611.1 Genbank gene 3500057 3500764 . + . ID=gene-NM058_18105;Name=NM058_18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18105 CP101611.1 Protein Homology CDS 3500057 3500764 . + 0 ID=cds-UTX04805.1;Parent=gene-NM058_18105;Dbxref=NCBI_GP:UTX04805.1;Name=UTX04805.1;Ontology_term=GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388614.1;locus_tag=NM058_18105;product=YjjG family noncanonical pyrimidine nucleotidase;protein_id=UTX04805.1;transl_table=11 CP101611.1 Genbank gene 3500876 3502105 . + . ID=gene-NM058_18110;Name=NM058_18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18110 CP101611.1 Protein Homology CDS 3500876 3502105 . + 0 ID=cds-UTX04806.1;Parent=gene-NM058_18110;Dbxref=NCBI_GP:UTX04806.1;Name=UTX04806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388613.1;locus_tag=NM058_18110;product=MFS transporter;protein_id=UTX04806.1;transl_table=11 CP101611.1 Genbank gene 3502134 3503069 . - . ID=gene-NM058_18115;Name=NM058_18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18115 CP101611.1 Protein Homology CDS 3502134 3503069 . - 0 ID=cds-UTX07090.1;Parent=gene-NM058_18115;Dbxref=NCBI_GP:UTX07090.1;Name=UTX07090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388612.1;locus_tag=NM058_18115;product=putative nucleotide-diphospho-sugar transferase;protein_id=UTX07090.1;transl_table=11 CP101611.1 Genbank gene 3503084 3504247 . - . ID=gene-NM058_18120;Name=NM058_18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18120 CP101611.1 Protein Homology CDS 3503084 3504247 . - 0 ID=cds-UTX04807.1;Parent=gene-NM058_18120;Dbxref=NCBI_GP:UTX04807.1;Name=UTX04807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014304586.1;locus_tag=NM058_18120;product=glycosyltransferase;protein_id=UTX04807.1;transl_table=11 CP101611.1 Genbank gene 3504276 3505187 . - . ID=gene-NM058_18125;Name=NM058_18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18125 CP101611.1 Protein Homology CDS 3504276 3505187 . - 0 ID=cds-UTX07091.1;Parent=gene-NM058_18125;Dbxref=NCBI_GP:UTX07091.1;Name=UTX07091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388610.1;locus_tag=NM058_18125;product=putative nucleotide-diphospho-sugar transferase;protein_id=UTX07091.1;transl_table=11 CP101611.1 Genbank pseudogene 3505211 3506178 . - . ID=gene-NM058_18130;Name=NM058_18130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18130;pseudo=true CP101611.1 Protein Homology CDS 3505211 3506178 . - 0 ID=cds-NM058_18130;Parent=gene-NM058_18130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388609.2;locus_tag=NM058_18130;product=GDP-mannose 4%2C6-dehydratase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3506185 3506947 . - . ID=gene-NM058_18135;Name=NM058_18135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18135;pseudo=true CP101611.1 Protein Homology CDS 3506185 3506947 . - 0 ID=cds-NM058_18135;Parent=gene-NM058_18135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388608.1;locus_tag=NM058_18135;product=glucose-1-phosphate cytidylyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3507184 3509101 . - . ID=gene-NM058_18140;Name=ltaS1;gbkey=Gene;gene=ltaS1;gene_biotype=pseudogene;locus_tag=NM058_18140;pseudo=true CP101611.1 Protein Homology CDS 3507184 3509101 . - 0 ID=cds-NM058_18140;Parent=gene-NM058_18140;Note=frameshifted;gbkey=CDS;gene=ltaS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388607.2;locus_tag=NM058_18140;product=lipoteichoic acid synthase LtaS1;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3509539 3512724 . - . ID=gene-NM058_18145;Name=cypD;gbkey=Gene;gene=cypD;gene_biotype=protein_coding;locus_tag=NM058_18145 CP101611.1 Protein Homology CDS 3509539 3512724 . - 0 ID=cds-UTX04808.1;Parent=gene-NM058_18145;Dbxref=NCBI_GP:UTX04808.1;Name=UTX04808.1;gbkey=CDS;gene=cypD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388606.1;locus_tag=NM058_18145;product=bifunctional P-450/NADPH--P450 reductase;protein_id=UTX04808.1;transl_table=11 CP101611.1 Genbank gene 3512874 3513941 . + . ID=gene-NM058_18150;Name=NM058_18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18150 CP101611.1 Protein Homology CDS 3512874 3513941 . + 0 ID=cds-UTX04809.1;Parent=gene-NM058_18150;Dbxref=NCBI_GP:UTX04809.1;Name=UTX04809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388605.1;locus_tag=NM058_18150;product=DUF3900 domain-containing protein;protein_id=UTX04809.1;transl_table=11 CP101611.1 Genbank gene 3514213 3516711 . + . ID=gene-NM058_18155;Name=NM058_18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18155 CP101611.1 Protein Homology CDS 3514213 3516711 . + 0 ID=cds-UTX04810.1;Parent=gene-NM058_18155;Dbxref=NCBI_GP:UTX04810.1;Name=UTX04810.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF025056.2;locus_tag=NM058_18155;product=TIR domain-containing protein;protein_id=UTX04810.1;transl_table=11 CP101611.1 Genbank pseudogene 3516760 3517868 . - . ID=gene-NM058_18160;Name=NM058_18160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18160;pseudo=true CP101611.1 Protein Homology CDS 3516760 3517868 . - 0 ID=cds-NM058_18160;Parent=gene-NM058_18160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388604.1;locus_tag=NM058_18160;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3518018 3518521 . + . ID=gene-NM058_18165;Name=yetL;gbkey=Gene;gene=yetL;gene_biotype=protein_coding;locus_tag=NM058_18165 CP101611.1 Protein Homology CDS 3518018 3518521 . + 0 ID=cds-UTX04811.1;Parent=gene-NM058_18165;Dbxref=NCBI_GP:UTX04811.1;Name=UTX04811.1;gbkey=CDS;gene=yetL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388603.1;locus_tag=NM058_18165;product=transcriptional regulator YetL;protein_id=UTX04811.1;transl_table=11 CP101611.1 Genbank gene 3518545 3518700 . - . ID=gene-NM058_18170;Name=NM058_18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18170 CP101611.1 Protein Homology CDS 3518545 3518700 . - 0 ID=cds-UTX04812.1;Parent=gene-NM058_18170;Dbxref=NCBI_GP:UTX04812.1;Name=UTX04812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014476091.1;locus_tag=NM058_18170;product=transporter;protein_id=UTX04812.1;transl_table=11 CP101611.1 Genbank gene 3518752 3519396 . - . ID=gene-NM058_18175;Name=NM058_18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18175 CP101611.1 Protein Homology CDS 3518752 3519396 . - 0 ID=cds-UTX04813.1;Parent=gene-NM058_18175;Dbxref=NCBI_GP:UTX04813.1;Name=UTX04813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388601.1;locus_tag=NM058_18175;product=Bax inhibitor-1/YccA family protein;protein_id=UTX04813.1;transl_table=11 CP101611.1 Genbank gene 3519505 3519672 . - . ID=gene-NM058_18180;Name=NM058_18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18180 CP101611.1 Protein Homology CDS 3519505 3519672 . - 0 ID=cds-UTX04814.1;Parent=gene-NM058_18180;Dbxref=NCBI_GP:UTX04814.1;Name=UTX04814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388600.1;locus_tag=NM058_18180;product=YezD family protein;protein_id=UTX04814.1;transl_table=11 CP101611.1 Genbank gene 3519829 3520701 . - . ID=gene-NM058_18185;Name=NM058_18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18185 CP101611.1 Protein Homology CDS 3519829 3520701 . - 0 ID=cds-UTX04815.1;Parent=gene-NM058_18185;Dbxref=NCBI_GP:UTX04815.1;Name=UTX04815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014112979.1;locus_tag=NM058_18185;product=STAS domain-containing protein;protein_id=UTX04815.1;transl_table=11 CP101611.1 Genbank gene 3520898 3521428 . + . ID=gene-NM058_18190;Name=NM058_18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18190 CP101611.1 Protein Homology CDS 3520898 3521428 . + 0 ID=cds-UTX04816.1;Parent=gene-NM058_18190;Dbxref=NCBI_GP:UTX04816.1;Name=UTX04816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014479127.1;locus_tag=NM058_18190;product=hypothetical protein;protein_id=UTX04816.1;transl_table=11 CP101611.1 Genbank gene 3521522 3521884 . + . ID=gene-NM058_18195;Name=NM058_18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18195 CP101611.1 Protein Homology CDS 3521522 3521884 . + 0 ID=cds-UTX04817.1;Parent=gene-NM058_18195;Dbxref=NCBI_GP:UTX04817.1;Name=UTX04817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388597.1;locus_tag=NM058_18195;product=VOC family protein;protein_id=UTX04817.1;transl_table=11 CP101611.1 Genbank gene 3521984 3522307 . + . ID=gene-NM058_18200;Name=hmoA;gbkey=Gene;gene=hmoA;gene_biotype=protein_coding;locus_tag=NM058_18200 CP101611.1 Protein Homology CDS 3521984 3522307 . + 0 ID=cds-UTX04818.1;Parent=gene-NM058_18200;Dbxref=NCBI_GP:UTX04818.1;Name=UTX04818.1;gbkey=CDS;gene=hmoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003239990.1;locus_tag=NM058_18200;product=heme-degrading oxygenase HmoA;protein_id=UTX04818.1;transl_table=11 CP101611.1 Genbank gene 3522347 3523042 . - . ID=gene-NM058_18205;Name=NM058_18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18205 CP101611.1 Protein Homology CDS 3522347 3523042 . - 0 ID=cds-UTX04819.1;Parent=gene-NM058_18205;Dbxref=NCBI_GP:UTX04819.1;Name=UTX04819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388595.1;locus_tag=NM058_18205;product=DUF421 domain-containing protein;protein_id=UTX04819.1;transl_table=11 CP101611.1 Genbank pseudogene 3523152 3524491 . - . ID=gene-NM058_18210;Name=lplD;gbkey=Gene;gene=lplD;gene_biotype=pseudogene;locus_tag=NM058_18210;pseudo=true CP101611.1 Protein Homology CDS 3523152 3524491 . - 0 ID=cds-NM058_18210;Parent=gene-NM058_18210;Note=frameshifted;gbkey=CDS;gene=lplD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003239993.1;locus_tag=NM058_18210;product=alpha-galacturonidase LplD;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3524500 3525386 . - . ID=gene-NM058_18215;Name=NM058_18215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18215;pseudo=true CP101611.1 Protein Homology CDS 3524500 3525386 . - 0 ID=cds-NM058_18215;Parent=gene-NM058_18215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388593.1;locus_tag=NM058_18215;product=carbohydrate ABC transporter permease;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3525400 3526355 . - . ID=gene-NM058_18220;Name=NM058_18220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18220;pseudo=true CP101611.1 Protein Homology CDS 3525400 3526355 . - 0 ID=cds-NM058_18220;Parent=gene-NM058_18220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388592.1;locus_tag=NM058_18220;product=sugar ABC transporter permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3526410 3527918 . - . ID=gene-NM058_18225;Name=NM058_18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18225 CP101611.1 Protein Homology CDS 3526410 3527918 . - 0 ID=cds-UTX04820.1;Parent=gene-NM058_18225;Dbxref=NCBI_GP:UTX04820.1;Name=UTX04820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388591.1;locus_tag=NM058_18225;product=extracellular solute-binding protein;protein_id=UTX04820.1;transl_table=11 CP101611.1 Genbank gene 3528041 3530614 . - . ID=gene-NM058_18230;Name=NM058_18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18230 CP101611.1 Protein Homology CDS 3528041 3530614 . - 0 ID=cds-UTX04821.1;Parent=gene-NM058_18230;Dbxref=NCBI_GP:UTX04821.1;Name=UTX04821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388590.2;locus_tag=NM058_18230;product=hypothetical protein;protein_id=UTX04821.1;transl_table=11 CP101611.1 Genbank gene 3530663 3532654 . - . ID=gene-NM058_18235;Name=NM058_18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18235 CP101611.1 Protein Homology CDS 3530663 3532654 . - 0 ID=cds-UTX04822.1;Parent=gene-NM058_18235;Dbxref=NCBI_GP:UTX04822.1;Name=UTX04822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240005.1;locus_tag=NM058_18235;product=beta-galactosidase;protein_id=UTX04822.1;transl_table=11 CP101611.1 Genbank gene 3532660 3533313 . - . ID=gene-NM058_18240;Name=NM058_18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18240 CP101611.1 Protein Homology CDS 3532660 3533313 . - 0 ID=cds-UTX04823.1;Parent=gene-NM058_18240;Dbxref=NCBI_GP:UTX04823.1;Name=UTX04823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017695600.1;locus_tag=NM058_18240;product=rhamnogalacturonan acetylesterase;protein_id=UTX04823.1;transl_table=11 CP101611.1 Genbank gene 3533480 3535318 . - . ID=gene-NM058_18245;Name=rhgX;gbkey=Gene;gene=rhgX;gene_biotype=protein_coding;locus_tag=NM058_18245 CP101611.1 Protein Homology CDS 3533480 3535318 . - 0 ID=cds-UTX04824.1;Parent=gene-NM058_18245;Dbxref=NCBI_GP:UTX04824.1;Name=UTX04824.1;Ontology_term=GO:0071555;gbkey=CDS;gene=rhgX;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388587.1;locus_tag=NM058_18245;product=rhamnogalacturonan exolyase;protein_id=UTX04824.1;transl_table=11 CP101611.1 Genbank gene 3535364 3537226 . - . ID=gene-NM058_18250;Name=rhgW;gbkey=Gene;gene=rhgW;gene_biotype=protein_coding;gene_synonym=yesW;locus_tag=NM058_18250 CP101611.1 Protein Homology CDS 3535364 3537226 . - 0 ID=cds-UTX04825.1;Parent=gene-NM058_18250;Dbxref=NCBI_GP:UTX04825.1;Name=UTX04825.1;Ontology_term=GO:0102210;gbkey=CDS;gene=rhgW;go_function=rhamnogalacturonan endolyase activity|0102210||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388586.1;locus_tag=NM058_18250;product=rhamnogalacturonan lyase;protein_id=UTX04825.1;transl_table=11 CP101611.1 Genbank gene 3537347 3537973 . - . ID=gene-NM058_18255;Name=NM058_18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18255 CP101611.1 Protein Homology CDS 3537347 3537973 . - 0 ID=cds-UTX04826.1;Parent=gene-NM058_18255;Dbxref=NCBI_GP:UTX04826.1;Name=UTX04826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388585.1;locus_tag=NM058_18255;product=YesL family protein;protein_id=UTX04826.1;transl_table=11 CP101611.1 Genbank gene 3537970 3538632 . - . ID=gene-NM058_18260;Name=NM058_18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18260 CP101611.1 Protein Homology CDS 3537970 3538632 . - 0 ID=cds-UTX04827.1;Parent=gene-NM058_18260;Dbxref=NCBI_GP:UTX04827.1;Name=UTX04827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388584.1;locus_tag=NM058_18260;product=YesU family protein;protein_id=UTX04827.1;transl_table=11 CP101611.1 Genbank gene 3538625 3539323 . - . ID=gene-NM058_18265;Name=rhgT;gbkey=Gene;gene=rhgT;gene_biotype=protein_coding;gene_synonym=yesT;locus_tag=NM058_18265 CP101611.1 Protein Homology CDS 3538625 3539323 . - 0 ID=cds-UTX04828.1;Parent=gene-NM058_18265;Dbxref=NCBI_GP:UTX04828.1;Name=UTX04828.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rhgT;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388583.1;locus_tag=NM058_18265;product=rhamnogalacturonan acetylesterase;protein_id=UTX04828.1;transl_table=11 CP101611.1 Genbank gene 3539337 3541622 . - . ID=gene-NM058_18270;Name=NM058_18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18270 CP101611.1 Protein Homology CDS 3539337 3541622 . - 0 ID=cds-UTX04829.1;Parent=gene-NM058_18270;Dbxref=NCBI_GP:UTX04829.1;Name=UTX04829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388582.1;locus_tag=NM058_18270;product=AraC family transcriptional regulator;protein_id=UTX04829.1;transl_table=11 CP101611.1 Genbank gene 3541644 3542678 . - . ID=gene-NM058_18275;Name=yesR;gbkey=Gene;gene=yesR;gene_biotype=protein_coding;gene_synonym=rhgH;locus_tag=NM058_18275 CP101611.1 Protein Homology CDS 3541644 3542678 . - 0 ID=cds-UTX04830.1;Parent=gene-NM058_18275;Dbxref=NCBI_GP:UTX04830.1;Name=UTX04830.1;gbkey=CDS;gene=yesR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388581.1;locus_tag=NM058_18275;product=rhamnogalacturonyl hydrolase YesR;protein_id=UTX04830.1;transl_table=11 CP101611.1 Genbank pseudogene 3542694 3543582 . - . ID=gene-NM058_18280;Name=NM058_18280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18280;pseudo=true CP101611.1 Protein Homology CDS 3542694 3543582 . - 0 ID=cds-NM058_18280;Parent=gene-NM058_18280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388580.1;locus_tag=NM058_18280;product=carbohydrate ABC transporter permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3543586 3544515 . - . ID=gene-NM058_18285;Name=NM058_18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18285 CP101611.1 Protein Homology CDS 3543586 3544515 . - 0 ID=cds-UTX04831.1;Parent=gene-NM058_18285;Dbxref=NCBI_GP:UTX04831.1;Name=UTX04831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388579.1;locus_tag=NM058_18285;product=sugar ABC transporter permease;protein_id=UTX04831.1;transl_table=11 CP101611.1 Genbank pseudogene 3544512 3545792 . - . ID=gene-NM058_18290;Name=NM058_18290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18290;pseudo=true CP101611.1 Protein Homology CDS 3544512 3545792 . - 0 ID=cds-NM058_18290;Parent=gene-NM058_18290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388578.2;locus_tag=NM058_18290;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3545896 3547000 . - . ID=gene-NM058_18295;Name=NM058_18295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18295;pseudo=true CP101611.1 Protein Homology CDS 3545896 3547000 . - 0 ID=cds-NM058_18295;Parent=gene-NM058_18295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388577.1;locus_tag=NM058_18295;product=response regulator transcription factor;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3547000 3548733 . - . ID=gene-NM058_18300;Name=yesM;gbkey=Gene;gene=yesM;gene_biotype=protein_coding;locus_tag=NM058_18300 CP101611.1 Protein Homology CDS 3547000 3548733 . - 0 ID=cds-UTX04832.1;Parent=gene-NM058_18300;Dbxref=NCBI_GP:UTX04832.1;Name=UTX04832.1;gbkey=CDS;gene=yesM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240029.1;locus_tag=NM058_18300;product=two-component system sensor histidine kinase YesM;protein_id=UTX04832.1;transl_table=11 CP101611.1 Genbank pseudogene 3548730 3549358 . - . ID=gene-NM058_18305;Name=NM058_18305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18305;pseudo=true CP101611.1 Protein Homology CDS 3548730 3549358 . - 0 ID=cds-NM058_18305;Parent=gene-NM058_18305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388575.1;locus_tag=NM058_18305;product=YesL family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3549472 3549798 . - . ID=gene-NM058_18310;Name=NM058_18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18310 CP101611.1 Protein Homology CDS 3549472 3549798 . - 0 ID=cds-UTX07092.1;Parent=gene-NM058_18310;Dbxref=NCBI_GP:UTX07092.1;Name=UTX07092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388574.2;locus_tag=NM058_18310;product=YesK-like family protein;protein_id=UTX07092.1;transl_table=11 CP101611.1 Genbank gene 3549795 3550337 . - . ID=gene-NM058_18315;Name=NM058_18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18315 CP101611.1 Protein Homology CDS 3549795 3550337 . - 0 ID=cds-UTX04833.1;Parent=gene-NM058_18315;Dbxref=NCBI_GP:UTX04833.1;Name=UTX04833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388573.1;locus_tag=NM058_18315;product=GNAT family N-acetyltransferase;protein_id=UTX04833.1;transl_table=11 CP101611.1 Genbank pseudogene 3550460 3551028 . - . ID=gene-NM058_18320;Name=cotJC;gbkey=Gene;gene=cotJC;gene_biotype=pseudogene;locus_tag=NM058_18320;pseudo=true CP101611.1 Protein Homology CDS 3550460 3551028 . - 0 ID=cds-NM058_18320;Parent=gene-NM058_18320;Note=frameshifted;gbkey=CDS;gene=cotJC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388572.1;locus_tag=NM058_18320;product=spore coat protein CotJC;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3551043 3551306 . - . ID=gene-NM058_18325;Name=cotJB;gbkey=Gene;gene=cotJB;gene_biotype=protein_coding;locus_tag=NM058_18325 CP101611.1 Protein Homology CDS 3551043 3551306 . - 0 ID=cds-UTX04834.1;Parent=gene-NM058_18325;Dbxref=NCBI_GP:UTX04834.1;Name=UTX04834.1;gbkey=CDS;gene=cotJB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388571.2;locus_tag=NM058_18325;product=spore coat protein CotJB;protein_id=UTX04834.1;transl_table=11 CP101611.1 Genbank gene 3551290 3551538 . - . ID=gene-NM058_18330;Name=cotJA;gbkey=Gene;gene=cotJA;gene_biotype=protein_coding;locus_tag=NM058_18330 CP101611.1 Protein Homology CDS 3551290 3551538 . - 0 ID=cds-UTX04835.1;Parent=gene-NM058_18330;Dbxref=NCBI_GP:UTX04835.1;Name=UTX04835.1;gbkey=CDS;gene=cotJA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007408933.1;locus_tag=NM058_18330;product=spore coat-associated protein CotJA;protein_id=UTX04835.1;transl_table=11 CP101611.1 Genbank gene 3551664 3552530 . - . ID=gene-NM058_18335;Name=NM058_18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18335 CP101611.1 Protein Homology CDS 3551664 3552530 . - 0 ID=cds-UTX04836.1;Parent=gene-NM058_18335;Dbxref=NCBI_GP:UTX04836.1;Name=UTX04836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388569.1;locus_tag=NM058_18335;product=NmrA family NAD(P)-binding protein;protein_id=UTX04836.1;transl_table=11 CP101611.1 Genbank gene 3552527 3552970 . - . ID=gene-NM058_18340;Name=NM058_18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18340 CP101611.1 Protein Homology CDS 3552527 3552970 . - 0 ID=cds-UTX04837.1;Parent=gene-NM058_18340;Dbxref=NCBI_GP:UTX04837.1;Name=UTX04837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388568.1;locus_tag=NM058_18340;product=nuclear transport factor 2 family protein;protein_id=UTX04837.1;transl_table=11 CP101611.1 Genbank gene 3553048 3553632 . - . ID=gene-NM058_18345;Name=NM058_18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18345 CP101611.1 Protein Homology CDS 3553048 3553632 . - 0 ID=cds-UTX04838.1;Parent=gene-NM058_18345;Dbxref=NCBI_GP:UTX04838.1;Name=UTX04838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054572.1;locus_tag=NM058_18345;product=TetR/AcrR family transcriptional regulator;protein_id=UTX04838.1;transl_table=11 CP101611.1 Genbank gene 3553739 3554107 . - . ID=gene-NM058_18350;Name=NM058_18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18350 CP101611.1 Protein Homology CDS 3553739 3554107 . - 0 ID=cds-UTX07093.1;Parent=gene-NM058_18350;Dbxref=NCBI_GP:UTX07093.1;Name=UTX07093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388567.2;locus_tag=NM058_18350;product=spore coat protein;protein_id=UTX07093.1;transl_table=11 CP101611.1 Genbank gene 3554232 3554951 . - . ID=gene-NM058_18355;Name=NM058_18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18355 CP101611.1 Protein Homology CDS 3554232 3554951 . - 0 ID=cds-UTX07094.1;Parent=gene-NM058_18355;Dbxref=NCBI_GP:UTX07094.1;Name=UTX07094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388566.3;locus_tag=NM058_18355;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=UTX07094.1;transl_table=11 CP101611.1 Genbank gene 3555112 3555288 . - . ID=gene-NM058_18360;Name=NM058_18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18360 CP101611.1 Protein Homology CDS 3555112 3555288 . - 0 ID=cds-UTX04839.1;Parent=gene-NM058_18360;Dbxref=NCBI_GP:UTX04839.1;Name=UTX04839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097693.1;locus_tag=NM058_18360;product=phosphatase RapH inhibitor;protein_id=UTX04839.1;transl_table=11 CP101611.1 Genbank pseudogene 3555278 3556416 . - . ID=gene-NM058_18365;Name=NM058_18365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18365;pseudo=true CP101611.1 Protein Homology CDS 3555278 3556416 . - 0 ID=cds-NM058_18365;Parent=gene-NM058_18365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388565.2;locus_tag=NM058_18365;product=aspartate phosphatase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3556580 3557434 . - . ID=gene-NM058_18370;Name=NM058_18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18370 CP101611.1 Protein Homology CDS 3556580 3557434 . - 0 ID=cds-UTX04840.1;Parent=gene-NM058_18370;Dbxref=NCBI_GP:UTX04840.1;Name=UTX04840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240062.1;locus_tag=NM058_18370;product=hypothetical protein;protein_id=UTX04840.1;transl_table=11 CP101611.1 Genbank gene 3557582 3558598 . - . ID=gene-NM058_18375;Name=NM058_18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18375 CP101611.1 Protein Homology CDS 3557582 3558598 . - 0 ID=cds-UTX04841.1;Parent=gene-NM058_18375;Dbxref=NCBI_GP:UTX04841.1;Name=UTX04841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240064.1;locus_tag=NM058_18375;product=hypothetical protein;protein_id=UTX04841.1;transl_table=11 CP101611.1 Genbank pseudogene 3558812 3559534 . + . ID=gene-NM058_18380;Name=NM058_18380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18380;pseudo=true CP101611.1 Protein Homology CDS 3558812 3559534 . + 0 ID=cds-NM058_18380;Parent=gene-NM058_18380;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004399034.1;locus_tag=NM058_18380;product=T7SS effector LXG polymorphic toxin;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3560261 3560533 . + . ID=gene-NM058_18385;Name=NM058_18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18385 CP101611.1 Protein Homology CDS 3560261 3560533 . + 0 ID=cds-UTX07095.1;Parent=gene-NM058_18385;Dbxref=NCBI_GP:UTX07095.1;Name=UTX07095.1;Ontology_term=GO:0003723,GO:0016788,GO:0043022;gbkey=CDS;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,ribosome binding|0043022||IEA;inference=COORDINATES: protein motif:HMM:NF020569.2;locus_tag=NM058_18385;product=colicin E3/pyocin S6 family cytotoxin;protein_id=UTX07095.1;transl_table=11 CP101611.1 Genbank gene 3560554 3561099 . + . ID=gene-NM058_18390;Name=NM058_18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18390 CP101611.1 GeneMarkS-2+ CDS 3560554 3561099 . + 0 ID=cds-UTX04842.1;Parent=gene-NM058_18390;Dbxref=NCBI_GP:UTX04842.1;Name=UTX04842.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_18390;product=hypothetical protein;protein_id=UTX04842.1;transl_table=11 CP101611.1 Genbank pseudogene 3561123 3561609 . + . ID=gene-NM058_18395;Name=NM058_18395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18395;pseudo=true CP101611.1 Protein Homology CDS 3561123 3561609 . + 0 ID=cds-NM058_18395;Parent=gene-NM058_18395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403547.1;locus_tag=NM058_18395;product=antitoxin YezG family protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3561623 3562080 . + . ID=gene-NM058_18400;Name=NM058_18400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18400;pseudo=true CP101611.1 Protein Homology CDS 3561623 3562080 . + 0 ID=cds-NM058_18400;Parent=gene-NM058_18400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014417130.1;locus_tag=NM058_18400;product=antitoxin YezG family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3562115 3562585 . + . ID=gene-NM058_18405;Name=NM058_18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18405 CP101611.1 Protein Homology CDS 3562115 3562585 . + 0 ID=cds-UTX04843.1;Parent=gene-NM058_18405;Dbxref=NCBI_GP:UTX04843.1;Name=UTX04843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014471547.1;locus_tag=NM058_18405;product=antitoxin YezG family protein;protein_id=UTX04843.1;transl_table=11 CP101611.1 Genbank gene 3562684 3563139 . + . ID=gene-NM058_18410;Name=NM058_18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18410 CP101611.1 Protein Homology CDS 3562684 3563139 . + 0 ID=cds-UTX04844.1;Parent=gene-NM058_18410;Dbxref=NCBI_GP:UTX04844.1;Name=UTX04844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003244269.1;locus_tag=NM058_18410;product=TIGR01741 family protein;protein_id=UTX04844.1;transl_table=11 CP101611.1 Genbank gene 3563162 3563590 . + . ID=gene-NM058_18415;Name=NM058_18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18415 CP101611.1 Protein Homology CDS 3563162 3563590 . + 0 ID=cds-UTX04845.1;Parent=gene-NM058_18415;Dbxref=NCBI_GP:UTX04845.1;Name=UTX04845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003155715.1;locus_tag=NM058_18415;product=antitoxin YezG family protein;protein_id=UTX04845.1;transl_table=11 CP101611.1 Genbank gene 3563914 3564633 . - . ID=gene-NM058_18420;Name=NM058_18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18420 CP101611.1 GeneMarkS-2+ CDS 3563914 3564633 . - 0 ID=cds-UTX04846.1;Parent=gene-NM058_18420;Dbxref=NCBI_GP:UTX04846.1;Name=UTX04846.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_18420;product=hypothetical protein;protein_id=UTX04846.1;transl_table=11 CP101611.1 Genbank gene 3564797 3566230 . - . ID=gene-NM058_18425;Name=NM058_18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18425 CP101611.1 GeneMarkS-2+ CDS 3564797 3566230 . - 0 ID=cds-UTX04847.1;Parent=gene-NM058_18425;Dbxref=NCBI_GP:UTX04847.1;Name=UTX04847.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_18425;product=hypothetical protein;protein_id=UTX04847.1;transl_table=11 CP101611.1 Genbank gene 3566833 3568215 . - . ID=gene-NM058_18430;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=NM058_18430 CP101611.1 Protein Homology CDS 3566833 3568215 . - 0 ID=cds-UTX04848.1;Parent=gene-NM058_18430;Dbxref=NCBI_GP:UTX04848.1;Name=UTX04848.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240085.1;locus_tag=NM058_18430;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=UTX04848.1;transl_table=11 CP101611.1 Genbank gene 3568272 3569183 . - . ID=gene-NM058_18435;Name=NM058_18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18435 CP101611.1 Protein Homology CDS 3568272 3569183 . - 0 ID=cds-UTX04849.1;Parent=gene-NM058_18435;Dbxref=NCBI_GP:UTX04849.1;Name=UTX04849.1;Ontology_term=GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388554.1;locus_tag=NM058_18435;product=diacylglycerol kinase;protein_id=UTX04849.1;transl_table=11 CP101611.1 Genbank pseudogene 3569335 3572491 . - . ID=gene-NM058_18440;Name=srfP;gbkey=Gene;gene=srfP;gene_biotype=pseudogene;locus_tag=NM058_18440;pseudo=true CP101611.1 Protein Homology CDS 3569335 3572491 . - 0 ID=cds-NM058_18440;Parent=gene-NM058_18440;Note=frameshifted;Ontology_term=GO:0022857;gbkey=CDS;gene=srfP;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388553.2;locus_tag=NM058_18440;product=surfactin resistance protein SrfP;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3572643 3573486 . + . ID=gene-NM058_18445;Name=NM058_18445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18445;pseudo=true CP101611.1 Protein Homology CDS 3572643 3573486 . + 0 ID=cds-NM058_18445;Parent=gene-NM058_18445;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388552.1;locus_tag=NM058_18445;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3573505 3574935 . - . ID=gene-NM058_18450;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=NM058_18450 CP101611.1 Protein Homology CDS 3573505 3574935 . - 0 ID=cds-UTX04850.1;Parent=gene-NM058_18450;Dbxref=NCBI_GP:UTX04850.1;Name=UTX04850.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388551.2;locus_tag=NM058_18450;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=UTX04850.1;transl_table=11 CP101611.1 Genbank gene 3574949 3576406 . - . ID=gene-NM058_18455;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=NM058_18455 CP101611.1 Protein Homology CDS 3574949 3576406 . - 0 ID=cds-UTX04851.1;Parent=gene-NM058_18455;Dbxref=NCBI_GP:UTX04851.1;Name=UTX04851.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388550.1;locus_tag=NM058_18455;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=UTX04851.1;transl_table=11 CP101611.1 Genbank gene 3576422 3576712 . - . ID=gene-NM058_18460;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=NM058_18460 CP101611.1 Protein Homology CDS 3576422 3576712 . - 0 ID=cds-UTX04852.1;Parent=gene-NM058_18460;Dbxref=NCBI_GP:UTX04852.1;Name=UTX04852.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388549.1;locus_tag=NM058_18460;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=UTX04852.1;transl_table=11 CP101611.1 Genbank gene 3577126 3578604 . + . ID=gene-NM058_18465;Name=opuE;gbkey=Gene;gene=opuE;gene_biotype=protein_coding;locus_tag=NM058_18465 CP101611.1 Protein Homology CDS 3577126 3578604 . + 0 ID=cds-UTX04853.1;Parent=gene-NM058_18465;Dbxref=NCBI_GP:UTX04853.1;Name=UTX04853.1;gbkey=CDS;gene=opuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388548.1;locus_tag=NM058_18465;product=proline transporter OpuE;protein_id=UTX04853.1;transl_table=11 CP101611.1 Genbank gene 3578710 3579408 . + . ID=gene-NM058_18470;Name=NM058_18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18470 CP101611.1 Protein Homology CDS 3578710 3579408 . + 0 ID=cds-UTX04854.1;Parent=gene-NM058_18470;Dbxref=NCBI_GP:UTX04854.1;Name=UTX04854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388547.1;locus_tag=NM058_18470;product=MgtC/SapB family protein;protein_id=UTX04854.1;transl_table=11 CP101611.1 Genbank gene 3579689 3580738 . + . ID=gene-NM058_18475;Name=NM058_18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18475 CP101611.1 Protein Homology CDS 3579689 3580738 . + 0 ID=cds-UTX04855.1;Parent=gene-NM058_18475;Dbxref=NCBI_GP:UTX04855.1;Name=UTX04855.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: protein motif:HMM:NF012470.2;locus_tag=NM058_18475;product=alkaline phosphatase;protein_id=UTX04855.1;transl_table=11 CP101611.1 Genbank gene 3580735 3580896 . + . ID=gene-NM058_18480;Name=NM058_18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18480 CP101611.1 Protein Homology CDS 3580735 3580896 . + 0 ID=cds-UTX04856.1;Parent=gene-NM058_18480;Dbxref=NCBI_GP:UTX04856.1;Name=UTX04856.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: protein motif:HMM:NF012470.2;locus_tag=NM058_18480;product=alkaline phosphatase;protein_id=UTX04856.1;transl_table=11 CP101611.1 Genbank gene 3580967 3581968 . - . ID=gene-NM058_18485;Name=NM058_18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18485 CP101611.1 Protein Homology CDS 3580967 3581968 . - 0 ID=cds-UTX04857.1;Parent=gene-NM058_18485;Dbxref=NCBI_GP:UTX04857.1;Name=UTX04857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010329105.1;locus_tag=NM058_18485;product=phosphotransferase enzyme family protein;protein_id=UTX04857.1;transl_table=11 CP101611.1 Genbank gene 3582065 3584098 . - . ID=gene-NM058_18490;Name=NM058_18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18490 CP101611.1 Protein Homology CDS 3582065 3584098 . - 0 ID=cds-UTX04858.1;Parent=gene-NM058_18490;Dbxref=NCBI_GP:UTX04858.1;Name=UTX04858.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01686.1;locus_tag=NM058_18490;product=HAD-IIIC family phosphatase;protein_id=UTX04858.1;transl_table=11 CP101611.1 Genbank gene 3584110 3584640 . - . ID=gene-NM058_18495;Name=NM058_18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18495 CP101611.1 Protein Homology CDS 3584110 3584640 . - 0 ID=cds-UTX04859.1;Parent=gene-NM058_18495;Dbxref=NCBI_GP:UTX04859.1;Name=UTX04859.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NM058_18495;product=condensation domain-containing protein;protein_id=UTX04859.1;transl_table=11 CP101611.1 Genbank gene 3584673 3585902 . - . ID=gene-NM058_18500;Name=NM058_18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18500 CP101611.1 Protein Homology CDS 3584673 3585902 . - 0 ID=cds-UTX04860.1;Parent=gene-NM058_18500;Dbxref=NCBI_GP:UTX04860.1;Name=UTX04860.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NM058_18500;product=condensation domain-containing protein;protein_id=UTX04860.1;transl_table=11 CP101611.1 Genbank gene 3585874 3588384 . - . ID=gene-NM058_18505;Name=NM058_18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18505 CP101611.1 Protein Homology CDS 3585874 3588384 . - 0 ID=cds-UTX04861.1;Parent=gene-NM058_18505;Dbxref=NCBI_GP:UTX04861.1;Name=UTX04861.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012901.2;locus_tag=NM058_18505;product=type I polyketide synthase;protein_id=UTX04861.1;transl_table=11 CP101611.1 Genbank gene 3588386 3591043 . - . ID=gene-NM058_18510;Name=NM058_18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18510 CP101611.1 Protein Homology CDS 3588386 3591043 . - 0 ID=cds-UTX07096.1;Parent=gene-NM058_18510;Dbxref=NCBI_GP:UTX07096.1;Name=UTX07096.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020243.2;locus_tag=NM058_18510;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=UTX07096.1;transl_table=11 CP101611.1 Genbank gene 3590941 3592995 . - . ID=gene-NM058_18515;Name=NM058_18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18515 CP101611.1 Protein Homology CDS 3590941 3592995 . - 0 ID=cds-UTX04862.1;Parent=gene-NM058_18515;Dbxref=NCBI_GP:UTX04862.1;Name=UTX04862.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012337.2;locus_tag=NM058_18515;product=type I polyketide synthase;protein_id=UTX04862.1;transl_table=11 CP101611.1 Genbank gene 3592992 3595928 . - . ID=gene-NM058_18520;Name=NM058_18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18520 CP101611.1 Protein Homology CDS 3592992 3595928 . - 0 ID=cds-UTX04863.1;Parent=gene-NM058_18520;Dbxref=NCBI_GP:UTX04863.1;Name=UTX04863.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012901.2;locus_tag=NM058_18520;product=acyltransferase domain-containing protein;protein_id=UTX04863.1;transl_table=11 CP101611.1 Genbank gene 3595946 3598534 . - . ID=gene-NM058_18525;Name=NM058_18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18525 CP101611.1 Protein Homology CDS 3595946 3598534 . - 0 ID=cds-UTX04864.1;Parent=gene-NM058_18525;Dbxref=NCBI_GP:UTX04864.1;Name=UTX04864.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020243.2;locus_tag=NM058_18525;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=UTX04864.1;transl_table=11 CP101611.1 Genbank gene 3598546 3600468 . - . ID=gene-NM058_18530;Name=NM058_18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18530 CP101611.1 Protein Homology CDS 3598546 3600468 . - 0 ID=cds-UTX04865.1;Parent=gene-NM058_18530;Dbxref=NCBI_GP:UTX04865.1;Name=UTX04865.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012337.2;locus_tag=NM058_18530;product=type I polyketide synthase;protein_id=UTX04865.1;transl_table=11 CP101611.1 Genbank gene 3600502 3602160 . - . ID=gene-NM058_18535;Name=NM058_18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18535 CP101611.1 Protein Homology CDS 3600502 3602160 . - 0 ID=cds-UTX04866.1;Parent=gene-NM058_18535;Dbxref=NCBI_GP:UTX04866.1;Name=UTX04866.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01733.1;locus_tag=NM058_18535;product=non-ribosomal peptide synthetase;protein_id=UTX04866.1;transl_table=11 CP101611.1 Genbank gene 3602177 3602386 . - . ID=gene-NM058_18540;Name=NM058_18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18540 CP101611.1 GeneMarkS-2+ CDS 3602177 3602386 . - 0 ID=cds-UTX04867.1;Parent=gene-NM058_18540;Dbxref=NCBI_GP:UTX04867.1;Name=UTX04867.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_18540;product=hypothetical protein;protein_id=UTX04867.1;transl_table=11 CP101611.1 Genbank gene 3602355 3603125 . - . ID=gene-NM058_18545;Name=NM058_18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18545 CP101611.1 Protein Homology CDS 3602355 3603125 . - 0 ID=cds-UTX04868.1;Parent=gene-NM058_18545;Dbxref=NCBI_GP:UTX04868.1;Name=UTX04868.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NM058_18545;product=condensation domain-containing protein;protein_id=UTX04868.1;transl_table=11 CP101611.1 Genbank gene 3603145 3604152 . - . ID=gene-NM058_18550;Name=NM058_18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18550 CP101611.1 Protein Homology CDS 3603145 3604152 . - 0 ID=cds-UTX04869.1;Parent=gene-NM058_18550;Dbxref=NCBI_GP:UTX04869.1;Name=UTX04869.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NM058_18550;product=condensation domain-containing protein;protein_id=UTX04869.1;transl_table=11 CP101611.1 Genbank gene 3604182 3604748 . - . ID=gene-NM058_18555;Name=NM058_18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18555 CP101611.1 Protein Homology CDS 3604182 3604748 . - 0 ID=cds-UTX04870.1;Parent=gene-NM058_18555;Dbxref=NCBI_GP:UTX04870.1;Name=UTX04870.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NM058_18555;product=condensation domain-containing protein;protein_id=UTX04870.1;transl_table=11 CP101611.1 Genbank gene 3604754 3607420 . - . ID=gene-NM058_18560;Name=NM058_18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18560 CP101611.1 Protein Homology CDS 3604754 3607420 . - 0 ID=cds-UTX07097.1;Parent=gene-NM058_18560;Dbxref=NCBI_GP:UTX07097.1;Name=UTX07097.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012901.2;locus_tag=NM058_18560;product=acyltransferase domain-containing protein;protein_id=UTX07097.1;transl_table=11 CP101611.1 Genbank gene 3607347 3608840 . - . ID=gene-NM058_18565;Name=NM058_18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18565 CP101611.1 Protein Homology CDS 3607347 3608840 . - 0 ID=cds-UTX07098.1;Parent=gene-NM058_18565;Dbxref=NCBI_GP:UTX07098.1;Name=UTX07098.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012337.2;locus_tag=NM058_18565;product=type I polyketide synthase;protein_id=UTX07098.1;transl_table=11 CP101611.1 Genbank gene 3608855 3610045 . - . ID=gene-NM058_18570;Name=NM058_18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18570 CP101611.1 Protein Homology CDS 3608855 3610045 . - 0 ID=cds-UTX04871.1;Parent=gene-NM058_18570;Dbxref=NCBI_GP:UTX04871.1;Name=UTX04871.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.2;locus_tag=NM058_18570;product=AMP-binding protein;protein_id=UTX04871.1;transl_table=11 CP101611.1 Genbank gene 3610018 3612231 . - . ID=gene-NM058_18575;Name=NM058_18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18575 CP101611.1 Protein Homology CDS 3610018 3612231 . - 0 ID=cds-UTX04872.1;Parent=gene-NM058_18575;Dbxref=NCBI_GP:UTX04872.1;Name=UTX04872.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NM058_18575;product=condensation domain-containing protein;protein_id=UTX04872.1;transl_table=11 CP101611.1 Genbank gene 3612253 3613395 . - . ID=gene-NM058_18580;Name=NM058_18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18580 CP101611.1 Protein Homology CDS 3612253 3613395 . - 0 ID=cds-UTX04873.1;Parent=gene-NM058_18580;Dbxref=NCBI_GP:UTX04873.1;Name=UTX04873.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257687.1;locus_tag=NM058_18580;product=acyl-CoA dehydrogenase family protein;protein_id=UTX04873.1;transl_table=11 CP101611.1 Genbank gene 3613382 3613651 . - . ID=gene-NM058_18585;Name=NM058_18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18585 CP101611.1 Protein Homology CDS 3613382 3613651 . - 0 ID=cds-UTX04874.1;Parent=gene-NM058_18585;Dbxref=NCBI_GP:UTX04874.1;Name=UTX04874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240117.1;locus_tag=NM058_18585;product=acyl carrier protein;protein_id=UTX04874.1;transl_table=11 CP101611.1 Genbank gene 3613677 3614738 . - . ID=gene-NM058_18590;Name=NM058_18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18590 CP101611.1 Protein Homology CDS 3613677 3614738 . - 0 ID=cds-UTX04875.1;Parent=gene-NM058_18590;Dbxref=NCBI_GP:UTX04875.1;Name=UTX04875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240119.1;locus_tag=NM058_18590;product=HAD-IIIC family phosphatase;protein_id=UTX04875.1;transl_table=11 CP101611.1 Genbank gene 3614754 3615608 . - . ID=gene-NM058_18595;Name=NM058_18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18595 CP101611.1 Protein Homology CDS 3614754 3615608 . - 0 ID=cds-UTX04876.1;Parent=gene-NM058_18595;Dbxref=NCBI_GP:UTX04876.1;Name=UTX04876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014663083.1;locus_tag=NM058_18595;product=3-hydroxyacyl-CoA dehydrogenase family protein;protein_id=UTX04876.1;transl_table=11 CP101611.1 Genbank gene 3615610 3616311 . - . ID=gene-NM058_18600;Name=NM058_18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18600 CP101611.1 Protein Homology CDS 3615610 3616311 . - 0 ID=cds-UTX04877.1;Parent=gene-NM058_18600;Dbxref=NCBI_GP:UTX04877.1;Name=UTX04877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014663082.1;locus_tag=NM058_18600;product=alpha/beta fold hydrolase;protein_id=UTX04877.1;transl_table=11 CP101611.1 Genbank gene 3616308 3616652 . - . ID=gene-NM058_18605;Name=NM058_18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18605 CP101611.1 GeneMarkS-2+ CDS 3616308 3616652 . - 0 ID=cds-UTX04878.1;Parent=gene-NM058_18605;Dbxref=NCBI_GP:UTX04878.1;Name=UTX04878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_18605;product=hypothetical protein;protein_id=UTX04878.1;transl_table=11 CP101611.1 Genbank gene 3616658 3617290 . - . ID=gene-NM058_18610;Name=NM058_18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18610 CP101611.1 Protein Homology CDS 3616658 3617290 . - 0 ID=cds-UTX04879.1;Parent=gene-NM058_18610;Dbxref=NCBI_GP:UTX04879.1;Name=UTX04879.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024919.2;locus_tag=NM058_18610;product=BtrH N-terminal domain-containing protein;protein_id=UTX04879.1;transl_table=11 CP101611.1 Genbank gene 3617280 3618785 . - . ID=gene-NM058_18615;Name=NM058_18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18615 CP101611.1 Protein Homology CDS 3617280 3618785 . - 0 ID=cds-UTX04880.1;Parent=gene-NM058_18615;Dbxref=NCBI_GP:UTX04880.1;Name=UTX04880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240126.1;locus_tag=NM058_18615;product=beta-lactamase family protein;protein_id=UTX04880.1;transl_table=11 CP101611.1 Genbank gene 3618782 3623278 . - . ID=gene-NM058_18620;Name=NM058_18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18620 CP101611.1 Protein Homology CDS 3618782 3623278 . - 0 ID=cds-UTX04881.1;Parent=gene-NM058_18620;Dbxref=NCBI_GP:UTX04881.1;Name=UTX04881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257681.1;locus_tag=NM058_18620;product=amino acid adenylation domain-containing protein;protein_id=UTX04881.1;transl_table=11 CP101611.1 Genbank gene 3623360 3624553 . - . ID=gene-NM058_18625;Name=NM058_18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18625 CP101611.1 Protein Homology CDS 3623360 3624553 . - 0 ID=cds-UTX04882.1;Parent=gene-NM058_18625;Dbxref=NCBI_GP:UTX04882.1;Name=UTX04882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257680.1;locus_tag=NM058_18625;product=MFS transporter;protein_id=UTX04882.1;transl_table=11 CP101611.1 Genbank pseudogene 3624678 3625866 . - . ID=gene-NM058_18630;Name=NM058_18630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18630;pseudo=true CP101611.1 Protein Homology CDS 3624678 3625866 . - 0 ID=cds-NM058_18630;Parent=gene-NM058_18630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388545.1;locus_tag=NM058_18630;product=CamS family sex pheromone protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3625882 3627888 . - . ID=gene-NM058_18635;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=NM058_18635 CP101611.1 Protein Homology CDS 3625882 3627888 . - 0 ID=cds-UTX04883.1;Parent=gene-NM058_18635;Dbxref=NCBI_GP:UTX04883.1;Name=UTX04883.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388544.1;locus_tag=NM058_18635;product=NAD-dependent DNA ligase LigA;protein_id=UTX04883.1;transl_table=11 CP101611.1 Genbank pseudogene 3627912 3630129 . - . ID=gene-NM058_18640;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=pseudogene;locus_tag=NM058_18640;pseudo=true CP101611.1 Protein Homology CDS 3627912 3630129 . - 0 ID=cds-NM058_18640;Parent=gene-NM058_18640;Note=frameshifted;Ontology_term=GO:0006268,GO:0006281,GO:0003678;gbkey=CDS;gene=pcrA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388543.1;locus_tag=NM058_18640;product=DNA helicase PcrA;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3630191 3630876 . - . ID=gene-NM058_18645;Name=NM058_18645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18645;pseudo=true CP101611.1 Protein Homology CDS 3630191 3630876 . - 0 ID=cds-NM058_18645;Parent=gene-NM058_18645;Note=frameshifted;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388542.1;locus_tag=NM058_18645;product=heptaprenylglyceryl phosphate synthase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3631158 3632734 . + . ID=gene-NM058_18650;Name=NM058_18650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18650;pseudo=true CP101611.1 Protein Homology CDS 3631158 3632734 . + 0 ID=cds-NM058_18650;Parent=gene-NM058_18650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388541.1;locus_tag=NM058_18650;product=FMN-binding glutamate synthase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3632772 3633086 . - . ID=gene-NM058_18655;Name=NM058_18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18655 CP101611.1 Protein Homology CDS 3632772 3633086 . - 0 ID=cds-UTX04884.1;Parent=gene-NM058_18655;Dbxref=NCBI_GP:UTX04884.1;Name=UTX04884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388540.1;locus_tag=NM058_18655;product=YerC/YecD family TrpR-related protein;protein_id=UTX04884.1;transl_table=11 CP101611.1 Genbank gene 3633089 3634084 . - . ID=gene-NM058_18660;Name=NM058_18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18660 CP101611.1 Protein Homology CDS 3633089 3634084 . - 0 ID=cds-UTX04885.1;Parent=gene-NM058_18660;Dbxref=NCBI_GP:UTX04885.1;Name=UTX04885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388539.1;locus_tag=NM058_18660;product=DUF3048 domain-containing protein;protein_id=UTX04885.1;transl_table=11 CP101611.1 Genbank pseudogene 3634111 3635852 . - . ID=gene-NM058_18665;Name=NM058_18665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18665;pseudo=true CP101611.1 Protein Homology CDS 3634111 3635852 . - 0 ID=cds-NM058_18665;Parent=gene-NM058_18665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388538.1;locus_tag=NM058_18665;product=adenine deaminase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3635983 3636216 . + . ID=gene-NM058_18670;Name=NM058_18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18670 CP101611.1 Protein Homology CDS 3635983 3636216 . + 0 ID=cds-UTX04886.1;Parent=gene-NM058_18670;Dbxref=NCBI_GP:UTX04886.1;Name=UTX04886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019713513.1;locus_tag=NM058_18670;product=DUF2892 domain-containing protein;protein_id=UTX04886.1;transl_table=11 CP101611.1 Genbank pseudogene 3636231 3637503 . - . ID=gene-NM058_18675;Name=NM058_18675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18675;pseudo=true CP101611.1 Protein Homology CDS 3636231 3637503 . - 0 ID=cds-NM058_18675;Parent=gene-NM058_18675;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388537.2;locus_tag=NM058_18675;product=amino acid permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3637647 3638069 . + . ID=gene-NM058_18680;Name=NM058_18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18680 CP101611.1 Protein Homology CDS 3637647 3638069 . + 0 ID=cds-UTX04887.1;Parent=gene-NM058_18680;Dbxref=NCBI_GP:UTX04887.1;Name=UTX04887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014112924.1;locus_tag=NM058_18680;product=Lrp/AsnC family transcriptional regulator;protein_id=UTX04887.1;transl_table=11 CP101611.1 Genbank gene 3638098 3639372 . - . ID=gene-NM058_18685;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=NM058_18685 CP101611.1 Protein Homology CDS 3638098 3639372 . - 0 ID=cds-UTX04888.1;Parent=gene-NM058_18685;Dbxref=NCBI_GP:UTX04888.1;Name=UTX04888.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017359817.1;locus_tag=NM058_18685;product=phosphoribosylamine--glycine ligase;protein_id=UTX04888.1;transl_table=11 CP101611.1 Genbank pseudogene 3639388 3640925 . - . ID=gene-NM058_18690;Name=purH;gbkey=Gene;gene=purH;gene_biotype=pseudogene;locus_tag=NM058_18690;pseudo=true CP101611.1 Protein Homology CDS 3639388 3640925 . - 0 ID=cds-NM058_18690;Parent=gene-NM058_18690;Note=frameshifted;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388534.2;locus_tag=NM058_18690;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3640922 3641509 . - . ID=gene-NM058_18695;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=NM058_18695 CP101611.1 Protein Homology CDS 3640922 3641509 . - 0 ID=cds-UTX04889.1;Parent=gene-NM058_18695;Dbxref=NCBI_GP:UTX04889.1;Name=UTX04889.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388533.2;locus_tag=NM058_18695;product=phosphoribosylglycinamide formyltransferase;protein_id=UTX04889.1;transl_table=11 CP101611.1 Genbank gene 3641506 3642546 . - . ID=gene-NM058_18700;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=NM058_18700 CP101611.1 Protein Homology CDS 3641506 3642546 . - 0 ID=cds-UTX04890.1;Parent=gene-NM058_18700;Dbxref=NCBI_GP:UTX04890.1;Name=UTX04890.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388532.2;locus_tag=NM058_18700;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=UTX04890.1;transl_table=11 CP101611.1 Genbank gene 3642647 3644077 . - . ID=gene-NM058_18705;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=NM058_18705 CP101611.1 Protein Homology CDS 3642647 3644077 . - 0 ID=cds-UTX04891.1;Parent=gene-NM058_18705;Dbxref=NCBI_GP:UTX04891.1;Name=UTX04891.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388531.2;locus_tag=NM058_18705;product=amidophosphoribosyltransferase;protein_id=UTX04891.1;transl_table=11 CP101611.1 Genbank gene 3644053 3646281 . - . ID=gene-NM058_18710;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=NM058_18710 CP101611.1 Protein Homology CDS 3644053 3646281 . - 0 ID=cds-UTX04892.1;Parent=gene-NM058_18710;Dbxref=NCBI_GP:UTX04892.1;Name=UTX04892.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388530.2;locus_tag=NM058_18710;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=UTX04892.1;transl_table=11 CP101611.1 Genbank gene 3646265 3646948 . - . ID=gene-NM058_18715;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=NM058_18715 CP101611.1 Protein Homology CDS 3646265 3646948 . - 0 ID=cds-UTX04893.1;Parent=gene-NM058_18715;Dbxref=NCBI_GP:UTX04893.1;Name=UTX04893.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388529.1;locus_tag=NM058_18715;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=UTX04893.1;transl_table=11 CP101611.1 Genbank gene 3646945 3647199 . - . ID=gene-NM058_18720;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=NM058_18720 CP101611.1 Protein Homology CDS 3646945 3647199 . - 0 ID=cds-UTX04894.1;Parent=gene-NM058_18720;Dbxref=NCBI_GP:UTX04894.1;Name=UTX04894.1;Ontology_term=GO:0009152,GO:0004642;gbkey=CDS;gene=purS;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388528.1;locus_tag=NM058_18720;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=UTX04894.1;transl_table=11 CP101611.1 Genbank gene 3647192 3647917 . - . ID=gene-NM058_18725;Name=NM058_18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18725 CP101611.1 Protein Homology CDS 3647192 3647917 . - 0 ID=cds-UTX04895.1;Parent=gene-NM058_18725;Dbxref=NCBI_GP:UTX04895.1;Name=UTX04895.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388527.1;locus_tag=NM058_18725;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=UTX04895.1;transl_table=11 CP101611.1 Genbank gene 3647992 3649287 . - . ID=gene-NM058_18730;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=NM058_18730 CP101611.1 Protein Homology CDS 3647992 3649287 . - 0 ID=cds-UTX04896.1;Parent=gene-NM058_18730;Dbxref=NCBI_GP:UTX04896.1;Name=UTX04896.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388526.1;locus_tag=NM058_18730;product=adenylosuccinate lyase;protein_id=UTX04896.1;transl_table=11 CP101611.1 Genbank pseudogene 3649284 3650425 . - . ID=gene-NM058_18735;Name=purK;gbkey=Gene;gene=purK;gene_biotype=pseudogene;locus_tag=NM058_18735;pseudo=true CP101611.1 Protein Homology CDS 3649284 3650425 . - 0 ID=cds-NM058_18735;Parent=gene-NM058_18735;Note=frameshifted;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388525.2;locus_tag=NM058_18735;product=5-(carboxyamino)imidazole ribonucleotide synthase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3650418 3650852 . - . ID=gene-NM058_18740;Name=purE;gbkey=Gene;gene=purE;gene_biotype=pseudogene;locus_tag=NM058_18740;pseudo=true CP101611.1 Protein Homology CDS 3650418 3650852 . - 0 ID=cds-NM058_18740;Parent=gene-NM058_18740;Note=internal stop;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: protein motif:HMM:NF012934.2;locus_tag=NM058_18740;product=5-(carboxyamino)imidazole ribonucleotide mutase;pseudo=true;transl_table=11 CP101611.1 cmsearch riboswitch 3651044 3651145 . - . ID=id-CP101611.1:3651044..3651145;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 3651225 3651422 . - . ID=gene-NM058_18745;Name=NM058_18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18745 CP101611.1 Protein Homology CDS 3651225 3651422 . - 0 ID=cds-UTX04897.1;Parent=gene-NM058_18745;Dbxref=NCBI_GP:UTX04897.1;Name=UTX04897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388523.1;locus_tag=NM058_18745;product=NETI motif-containing protein;protein_id=UTX04897.1;transl_table=11 CP101611.1 Genbank gene 3651422 3651976 . - . ID=gene-NM058_18750;Name=NM058_18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18750 CP101611.1 Protein Homology CDS 3651422 3651976 . - 0 ID=cds-UTX04898.1;Parent=gene-NM058_18750;Dbxref=NCBI_GP:UTX04898.1;Name=UTX04898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388521.2;locus_tag=NM058_18750;product=DUF5698 domain-containing protein;protein_id=UTX04898.1;transl_table=11 CP101611.1 Genbank gene 3652191 3652358 . - . ID=gene-NM058_18755;Name=NM058_18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18755 CP101611.1 Protein Homology CDS 3652191 3652358 . - 0 ID=cds-UTX04899.1;Parent=gene-NM058_18755;Dbxref=NCBI_GP:UTX04899.1;Name=UTX04899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388520.3;locus_tag=NM058_18755;product=Fur-regulated basic protein FbpA;protein_id=UTX04899.1;transl_table=11 CP101611.1 Genbank pseudogene 3652518 3653320 . - . ID=gene-NM058_18760;Name=NM058_18760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18760;pseudo=true CP101611.1 Protein Homology CDS 3652518 3653320 . - 0 ID=cds-NM058_18760;Parent=gene-NM058_18760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388519.2;locus_tag=NM058_18760;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3653529 3654851 . - . ID=gene-NM058_18765;Name=pbuG;gbkey=Gene;gene=pbuG;gene_biotype=protein_coding;locus_tag=NM058_18765 CP101611.1 Protein Homology CDS 3653529 3654851 . - 0 ID=cds-UTX04900.1;Parent=gene-NM058_18765;Dbxref=NCBI_GP:UTX04900.1;Name=UTX04900.1;gbkey=CDS;gene=pbuG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388518.1;locus_tag=NM058_18765;product=hypoxanthine/guanine permease PbuG;protein_id=UTX04900.1;transl_table=11 CP101611.1 cmsearch riboswitch 3654987 3655088 . - . ID=id-CP101611.1:3654987..3655088;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 3655241 3656701 . - . ID=gene-NM058_18770;Name=NM058_18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18770 CP101611.1 Protein Homology CDS 3655241 3656701 . - 0 ID=cds-UTX04901.1;Parent=gene-NM058_18770;Dbxref=NCBI_GP:UTX04901.1;Name=UTX04901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004397731.1;locus_tag=NM058_18770;product=DUF4179 domain-containing protein;protein_id=UTX04901.1;transl_table=11 CP101611.1 Genbank gene 3656683 3657216 . - . ID=gene-NM058_18775;Name=NM058_18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18775 CP101611.1 Protein Homology CDS 3656683 3657216 . - 0 ID=cds-UTX04902.1;Parent=gene-NM058_18775;Dbxref=NCBI_GP:UTX04902.1;Name=UTX04902.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015715433.1;locus_tag=NM058_18775;product=sigma-70 family RNA polymerase sigma factor;protein_id=UTX04902.1;transl_table=11 CP101611.1 Genbank gene 3657326 3658867 . - . ID=gene-NM058_18780;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=NM058_18780 CP101611.1 Protein Homology CDS 3657326 3658867 . - 0 ID=cds-UTX04903.1;Parent=gene-NM058_18780;Dbxref=NCBI_GP:UTX04903.1;Name=UTX04903.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388517.2;locus_tag=NM058_18780;product=glutamine-hydrolyzing GMP synthase;protein_id=UTX04903.1;transl_table=11 CP101611.1 Genbank pseudogene 3659028 3661240 . - . ID=gene-NM058_18785;Name=NM058_18785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18785;pseudo=true CP101611.1 Protein Homology CDS 3659028 3661240 . - 0 ID=cds-NM058_18785;Parent=gene-NM058_18785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388516.2;locus_tag=NM058_18785;product=DUF3488 and DUF4129 domain-containing transglutaminase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3661262 3662458 . - . ID=gene-NM058_18790;Name=NM058_18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18790 CP101611.1 Protein Homology CDS 3661262 3662458 . - 0 ID=cds-UTX04904.1;Parent=gene-NM058_18790;Dbxref=NCBI_GP:UTX04904.1;Name=UTX04904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388515.2;locus_tag=NM058_18790;product=DUF58 domain-containing protein;protein_id=UTX04904.1;transl_table=11 CP101611.1 Genbank pseudogene 3662458 3663418 . - . ID=gene-NM058_18795;Name=NM058_18795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18795;pseudo=true CP101611.1 Protein Homology CDS 3662458 3663418 . - 0 ID=cds-NM058_18795;Parent=gene-NM058_18795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388514.2;locus_tag=NM058_18795;product=MoxR family ATPase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3663569 3664440 . - . ID=gene-NM058_18800;Name=mneS;gbkey=Gene;gene=mneS;gene_biotype=pseudogene;locus_tag=NM058_18800;pseudo=true CP101611.1 Protein Homology CDS 3663569 3664440 . - 0 ID=cds-NM058_18800;Parent=gene-NM058_18800;Note=frameshifted;gbkey=CDS;gene=mneS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388513.1;locus_tag=NM058_18800;product=manganese transporter MneS;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3664853 3666262 . + . ID=gene-NM058_18805;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=NM058_18805 CP101611.1 Protein Homology CDS 3664853 3666262 . + 0 ID=cds-UTX04905.1;Parent=gene-NM058_18805;Dbxref=NCBI_GP:UTX04905.1;Name=UTX04905.1;Ontology_term=GO:0006810,GO:0009450,GO:0015495;gbkey=CDS;gene=gabP;go_function=gamma-aminobutyric acid:proton symporter activity|0015495||IEA;go_process=transport|0006810||IEA,gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388512.2;locus_tag=NM058_18805;product=GABA permease;protein_id=UTX04905.1;transl_table=11 CP101611.1 Genbank pseudogene 3666414 3667954 . + . ID=gene-NM058_18810;Name=cotA;gbkey=Gene;gene=cotA;gene_biotype=pseudogene;locus_tag=NM058_18810;pseudo=true CP101611.1 Protein Homology CDS 3666414 3667954 . + 0 ID=cds-NM058_18810;Parent=gene-NM058_18810;Note=frameshifted;gbkey=CDS;gene=cotA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388511.1;locus_tag=NM058_18810;product=outer spore coat copper-dependent laccase CotA;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3668053 3669041 . + . ID=gene-NM058_18815;Name=NM058_18815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18815;pseudo=true CP101611.1 Protein Homology CDS 3668053 3669041 . + 0 ID=cds-NM058_18815;Parent=gene-NM058_18815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388510.1;locus_tag=NM058_18815;product=DUF4003 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3669055 3669868 . + . ID=gene-NM058_18820;Name=NM058_18820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18820;pseudo=true CP101611.1 Protein Homology CDS 3669055 3669868 . + 0 ID=cds-NM058_18820;Parent=gene-NM058_18820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388509.1;locus_tag=NM058_18820;product=alpha/beta hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3669951 3670160 . + . ID=gene-NM058_18825;Name=NM058_18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18825 CP101611.1 Protein Homology CDS 3669951 3670160 . + 0 ID=cds-UTX04906.1;Parent=gene-NM058_18825;Dbxref=NCBI_GP:UTX04906.1;Name=UTX04906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388508.1;locus_tag=NM058_18825;product=cold-shock protein;protein_id=UTX04906.1;transl_table=11 CP101611.1 Genbank pseudogene 3670349 3670506 . + . ID=gene-NM058_18830;Name=NM058_18830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18830;pseudo=true CP101611.1 Protein Homology CDS 3670349 3670506 . + 0 ID=cds-NM058_18830;Parent=gene-NM058_18830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097689.1;locus_tag=NM058_18830;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3670539 3671585 . - . ID=gene-NM058_18835;Name=NM058_18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18835 CP101611.1 Protein Homology CDS 3670539 3671585 . - 0 ID=cds-UTX04907.1;Parent=gene-NM058_18835;Dbxref=NCBI_GP:UTX04907.1;Name=UTX04907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388507.1;locus_tag=NM058_18835;product=type IV pilin N-terminal domain-containing protein;protein_id=UTX04907.1;transl_table=11 CP101611.1 Genbank gene 3671651 3672022 . - . ID=gene-NM058_18840;Name=walM;gbkey=Gene;gene=walM;gene_biotype=protein_coding;gene_synonym=ydjM;locus_tag=NM058_18840 CP101611.1 Protein Homology CDS 3671651 3672022 . - 0 ID=cds-UTX04908.1;Parent=gene-NM058_18840;Dbxref=NCBI_GP:UTX04908.1;Name=UTX04908.1;gbkey=CDS;gene=walM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388506.1;locus_tag=NM058_18840;product=cell wall metabolism protein WalM;protein_id=UTX04908.1;transl_table=11 CP101611.1 Genbank pseudogene 3672460 3673499 . + . ID=gene-NM058_18845;Name=bdhA;gbkey=Gene;gene=bdhA;gene_biotype=pseudogene;locus_tag=NM058_18845;pseudo=true CP101611.1 Protein Homology CDS 3672460 3673499 . + 0 ID=cds-NM058_18845;Parent=gene-NM058_18845;Note=frameshifted;gbkey=CDS;gene=bdhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388505.1;locus_tag=NM058_18845;product=(R%2CR)-butanediol dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3673547 3674966 . - . ID=gene-NM058_18850;Name=iolT;gbkey=Gene;gene=iolT;gene_biotype=pseudogene;locus_tag=NM058_18850;pseudo=true CP101611.1 Protein Homology CDS 3673547 3674966 . - 0 ID=cds-NM058_18850;Parent=gene-NM058_18850;Note=frameshifted;gbkey=CDS;gene=iolT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388504.1;locus_tag=NM058_18850;product=myo-inositol transporter IolT;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3675576 3676571 . + . ID=gene-NM058_18855;Name=NM058_18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18855 CP101611.1 Protein Homology CDS 3675576 3676571 . + 0 ID=cds-UTX04909.1;Parent=gene-NM058_18855;Dbxref=NCBI_GP:UTX04909.1;Name=UTX04909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014476010.1;locus_tag=NM058_18855;product=potassium channel family protein;protein_id=UTX04909.1;transl_table=11 CP101611.1 Genbank gene 3676631 3677593 . - . ID=gene-NM058_18860;Name=NM058_18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18860 CP101611.1 Protein Homology CDS 3676631 3677593 . - 0 ID=cds-UTX04910.1;Parent=gene-NM058_18860;Dbxref=NCBI_GP:UTX04910.1;Name=UTX04910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388498.1;locus_tag=NM058_18860;product=carbohydrate kinase;protein_id=UTX04910.1;transl_table=11 CP101611.1 Genbank pseudogene 3677688 3679063 . - . ID=gene-NM058_18865;Name=NM058_18865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18865;pseudo=true CP101611.1 Protein Homology CDS 3677688 3679063 . - 0 ID=cds-NM058_18865;Parent=gene-NM058_18865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388497.1;locus_tag=NM058_18865;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3679137 3680199 . - . ID=gene-NM058_18870;Name=gutB;gbkey=Gene;gene=gutB;gene_biotype=pseudogene;locus_tag=NM058_18870;pseudo=true CP101611.1 Protein Homology CDS 3679137 3680199 . - 0 ID=cds-NM058_18870;Parent=gene-NM058_18870;Note=frameshifted;gbkey=CDS;gene=gutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388496.1;locus_tag=NM058_18870;product=sorbitol dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3680404 3682898 . + . ID=gene-NM058_18875;Name=NM058_18875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18875;pseudo=true CP101611.1 Protein Homology CDS 3680404 3682898 . + 0 ID=cds-NM058_18875;Parent=gene-NM058_18875;Note=frameshifted;Ontology_term=GO:0043531;gbkey=CDS;go_function=ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388495.1;locus_tag=NM058_18875;product=NB-ARC domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3682979 3683620 . - . ID=gene-NM058_18880;Name=NM058_18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18880 CP101611.1 Protein Homology CDS 3682979 3683620 . - 0 ID=cds-UTX07099.1;Parent=gene-NM058_18880;Dbxref=NCBI_GP:UTX07099.1;Name=UTX07099.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017538.2;locus_tag=NM058_18880;product=alpha/beta hydrolase family protein;protein_id=UTX07099.1;transl_table=11 CP101611.1 Genbank pseudogene 3683831 3684154 . - . ID=gene-NM058_18885;Name=NM058_18885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_18885;pseudo=true CP101611.1 Protein Homology CDS 3683831 3684154 . - 0 ID=cds-NM058_18885;Parent=gene-NM058_18885;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388493.1;locus_tag=NM058_18885;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3684729 3686363 . - . ID=gene-NM058_18890;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=NM058_18890 CP101611.1 Protein Homology CDS 3684729 3686363 . - 0 ID=cds-UTX04911.1;Parent=gene-NM058_18890;Dbxref=NCBI_GP:UTX04911.1;Name=UTX04911.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388484.1;locus_tag=NM058_18890;product=chaperonin GroEL;protein_id=UTX04911.1;transl_table=11 CP101611.1 Genbank gene 3686410 3686694 . - . ID=gene-NM058_18895;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=NM058_18895 CP101611.1 Protein Homology CDS 3686410 3686694 . - 0 ID=cds-UTX04912.1;Parent=gene-NM058_18895;Dbxref=NCBI_GP:UTX04912.1;Name=UTX04912.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=groES;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388483.2;locus_tag=NM058_18895;product=co-chaperone GroES;protein_id=UTX04912.1;transl_table=11 CP101611.1 Genbank gene 3686933 3687667 . + . ID=gene-NM058_18900;Name=NM058_18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18900 CP101611.1 Protein Homology CDS 3686933 3687667 . + 0 ID=cds-UTX04913.1;Parent=gene-NM058_18900;Dbxref=NCBI_GP:UTX04913.1;Name=UTX04913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388482.1;locus_tag=NM058_18900;product=CPBP family intramembrane metalloprotease;protein_id=UTX04913.1;transl_table=11 CP101611.1 Genbank gene 3687664 3687855 . + . ID=gene-NM058_18905;Name=NM058_18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18905 CP101611.1 Protein Homology CDS 3687664 3687855 . + 0 ID=cds-UTX04914.1;Parent=gene-NM058_18905;Dbxref=NCBI_GP:UTX04914.1;Name=UTX04914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388481.1;locus_tag=NM058_18905;product=YdiK family protein;protein_id=UTX04914.1;transl_table=11 CP101611.1 Genbank pseudogene 3687892 3688655 . - . ID=gene-NM058_18910;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=pseudogene;locus_tag=NM058_18910;pseudo=true CP101611.1 Protein Homology CDS 3687892 3688655 . - 0 ID=cds-NM058_18910;Parent=gene-NM058_18910;Note=frameshifted;Ontology_term=GO:0015628,GO:0005887;gbkey=CDS;gene=tatC;go_component=integral component of plasma membrane|0005887||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388480.1;locus_tag=NM058_18910;product=twin-arginine translocase subunit TatC;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3688662 3688834 . - . ID=gene-NM058_18915;Name=tatAY;gbkey=Gene;gene=tatAY;gene_biotype=pseudogene;locus_tag=NM058_18915;pseudo=true CP101611.1 Protein Homology CDS 3688662 3688834 . - 0 ID=cds-NM058_18915;Parent=gene-NM058_18915;Note=frameshifted;gbkey=CDS;gene=tatAY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388479.1;locus_tag=NM058_18915;product=sec-independent protein translocase protein TatAY;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3688856 3689503 . - . ID=gene-NM058_18920;Name=NM058_18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18920 CP101611.1 Protein Homology CDS 3688856 3689503 . - 0 ID=cds-UTX04915.1;Parent=gene-NM058_18920;Dbxref=NCBI_GP:UTX04915.1;Name=UTX04915.1;Ontology_term=GO:0045892,GO:0051775;gbkey=CDS;go_process=negative regulation of transcription%2C DNA-templated|0045892||IEA,response to redox state|0051775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388478.1;locus_tag=NM058_18920;product=redox-sensing transcriptional repressor Rex;protein_id=UTX04915.1;transl_table=11 CP101611.1 Genbank gene 3689500 3690012 . - . ID=gene-NM058_18925;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=NM058_18925 CP101611.1 Protein Homology CDS 3689500 3690012 . - 0 ID=cds-UTX04916.1;Parent=gene-NM058_18925;Dbxref=NCBI_GP:UTX04916.1;Name=UTX04916.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388477.1;locus_tag=NM058_18925;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=UTX04916.1;transl_table=11 CP101611.1 Genbank gene 3690138 3692066 . + . ID=gene-NM058_18930;Name=NM058_18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18930 CP101611.1 Protein Homology CDS 3690138 3692066 . + 0 ID=cds-UTX04917.1;Parent=gene-NM058_18930;Dbxref=NCBI_GP:UTX04917.1;Name=UTX04917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004397826.1;locus_tag=NM058_18930;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=UTX04917.1;transl_table=11 CP101611.1 Genbank gene 3692293 3693333 . - . ID=gene-NM058_18935;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=NM058_18935 CP101611.1 Protein Homology CDS 3692293 3693333 . - 0 ID=cds-UTX04918.1;Parent=gene-NM058_18935;Dbxref=NCBI_GP:UTX04918.1;Name=UTX04918.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010327789.1;locus_tag=NM058_18935;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=UTX04918.1;transl_table=11 CP101611.1 Genbank gene 3693326 3693781 . - . ID=gene-NM058_18940;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=NM058_18940 CP101611.1 Protein Homology CDS 3693326 3693781 . - 0 ID=cds-UTX04919.1;Parent=gene-NM058_18940;Dbxref=NCBI_GP:UTX04919.1;Name=UTX04919.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=ribosomal protein S5-alanine N-acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388474.1;locus_tag=NM058_18940;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=UTX04919.1;transl_table=11 CP101611.1 Genbank pseudogene 3693791 3694478 . - . ID=gene-NM058_18945;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=pseudogene;locus_tag=NM058_18945;pseudo=true CP101611.1 Protein Homology CDS 3693791 3694478 . - 0 ID=cds-NM058_18945;Parent=gene-NM058_18945;Note=frameshifted;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388473.1;locus_tag=NM058_18945;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3694459 3694935 . - . ID=gene-NM058_18950;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=NM058_18950 CP101611.1 Protein Homology CDS 3694459 3694935 . - 0 ID=cds-UTX04920.1;Parent=gene-NM058_18950;Dbxref=NCBI_GP:UTX04920.1;Name=UTX04920.1;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388472.1;locus_tag=NM058_18950;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=UTX04920.1;transl_table=11 CP101611.1 Genbank gene 3694950 3695927 . - . ID=gene-NM058_18955;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=NM058_18955 CP101611.1 Protein Homology CDS 3694950 3695927 . - 0 ID=cds-UTX04921.1;Parent=gene-NM058_18955;Dbxref=NCBI_GP:UTX04921.1;Name=UTX04921.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388471.1;locus_tag=NM058_18955;product=thiamine-phosphate kinase;protein_id=UTX04921.1;transl_table=11 CP101611.1 Genbank gene 3696106 3696182 . - . ID=gene-NM058_18960;Name=NM058_18960;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_18960 CP101611.1 tRNAscan-SE tRNA 3696106 3696182 . - . ID=rna-NM058_18960;Parent=gene-NM058_18960;anticodon=(pos:complement(3696146..3696148));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_18960;product=tRNA-Asp CP101611.1 tRNAscan-SE exon 3696106 3696182 . - . ID=exon-NM058_18960-1;Parent=rna-NM058_18960;anticodon=(pos:complement(3696146..3696148));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_18960;product=tRNA-Asp CP101611.1 Genbank gene 3696245 3696321 . - . ID=gene-NM058_18965;Name=NM058_18965;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_18965 CP101611.1 tRNAscan-SE tRNA 3696245 3696321 . - . ID=rna-NM058_18965;Parent=gene-NM058_18965;anticodon=(pos:complement(3696285..3696287));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_18965;product=tRNA-Met CP101611.1 tRNAscan-SE exon 3696245 3696321 . - . ID=exon-NM058_18965-1;Parent=rna-NM058_18965;anticodon=(pos:complement(3696285..3696287));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_18965;product=tRNA-Met CP101611.1 Genbank gene 3696344 3696459 . - . ID=gene-NM058_18970;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NM058_18970 CP101611.1 cmsearch rRNA 3696344 3696459 . - . ID=rna-NM058_18970;Parent=gene-NM058_18970;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_18970;product=5S ribosomal RNA CP101611.1 cmsearch exon 3696344 3696459 . - . ID=exon-NM058_18970-1;Parent=rna-NM058_18970;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_18970;product=5S ribosomal RNA CP101611.1 Genbank gene 3696514 3699441 . - . ID=gene-NM058_18975;Name=NM058_18975;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_18975 CP101611.1 cmsearch rRNA 3696514 3699441 . - . ID=rna-NM058_18975;Parent=gene-NM058_18975;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_18975;product=23S ribosomal RNA CP101611.1 cmsearch exon 3696514 3699441 . - . ID=exon-NM058_18975-1;Parent=rna-NM058_18975;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_18975;product=23S ribosomal RNA CP101611.1 Genbank gene 3699611 3701161 . - . ID=gene-NM058_18980;Name=NM058_18980;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_18980 CP101611.1 cmsearch rRNA 3699611 3701161 . - . ID=rna-NM058_18980;Parent=gene-NM058_18980;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_18980;product=16S ribosomal RNA CP101611.1 cmsearch exon 3699611 3701161 . - . ID=exon-NM058_18980-1;Parent=rna-NM058_18980;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_18980;product=16S ribosomal RNA CP101611.1 Genbank gene 3701324 3701397 . - . ID=gene-NM058_18985;Name=NM058_18985;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_18985 CP101611.1 tRNAscan-SE tRNA 3701324 3701397 . - . ID=rna-NM058_18985;Parent=gene-NM058_18985;anticodon=(pos:complement(3701363..3701365));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_18985;product=tRNA-Gly CP101611.1 tRNAscan-SE exon 3701324 3701397 . - . ID=exon-NM058_18985-1;Parent=rna-NM058_18985;anticodon=(pos:complement(3701363..3701365));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_18985;product=tRNA-Gly CP101611.1 Genbank gene 3701411 3701487 . - . ID=gene-NM058_18990;Name=NM058_18990;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_18990 CP101611.1 tRNAscan-SE tRNA 3701411 3701487 . - . ID=rna-NM058_18990;Parent=gene-NM058_18990;anticodon=(pos:complement(3701451..3701453));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_18990;product=tRNA-Arg CP101611.1 tRNAscan-SE exon 3701411 3701487 . - . ID=exon-NM058_18990-1;Parent=rna-NM058_18990;anticodon=(pos:complement(3701451..3701453));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_18990;product=tRNA-Arg CP101611.1 Genbank gene 3701822 3702676 . + . ID=gene-NM058_18995;Name=NM058_18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_18995 CP101611.1 Protein Homology CDS 3701822 3702676 . + 0 ID=cds-UTX04922.1;Parent=gene-NM058_18995;Dbxref=NCBI_GP:UTX04922.1;Name=UTX04922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240648.1;locus_tag=NM058_18995;product=manganese catalase family protein;protein_id=UTX04922.1;transl_table=11 CP101611.1 Genbank gene 3702742 3703830 . - . ID=gene-NM058_19000;Name=NM058_19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19000 CP101611.1 Protein Homology CDS 3702742 3703830 . - 0 ID=cds-UTX04923.1;Parent=gene-NM058_19000;Dbxref=NCBI_GP:UTX04923.1;Name=UTX04923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388469.2;locus_tag=NM058_19000;product=glycoside hydrolase family 26 protein;protein_id=UTX04923.1;transl_table=11 CP101611.1 Genbank gene 3703849 3704796 . - . ID=gene-NM058_19005;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=NM058_19005 CP101611.1 Protein Homology CDS 3703849 3704796 . - 0 ID=cds-UTX04924.1;Parent=gene-NM058_19005;Dbxref=NCBI_GP:UTX04924.1;Name=UTX04924.1;Ontology_term=GO:0005975,GO:0004476;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388468.1;locus_tag=NM058_19005;product=mannose-6-phosphate isomerase%2C class I;protein_id=UTX04924.1;transl_table=11 CP101611.1 Genbank pseudogene 3704793 3705691 . - . ID=gene-NM058_19010;Name=NM058_19010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19010;pseudo=true CP101611.1 Protein Homology CDS 3704793 3705691 . - 0 ID=cds-NM058_19010;Parent=gene-NM058_19010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388467.1;locus_tag=NM058_19010;product=ROK family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3705720 3706433 . - . ID=gene-NM058_19015;Name=gmuR;gbkey=Gene;gene=gmuR;gene_biotype=protein_coding;locus_tag=NM058_19015 CP101611.1 Protein Homology CDS 3705720 3706433 . - 0 ID=cds-UTX04925.1;Parent=gene-NM058_19015;Dbxref=NCBI_GP:UTX04925.1;Name=UTX04925.1;gbkey=CDS;gene=gmuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388466.1;locus_tag=NM058_19015;product=transcriptional regulator GmuR;protein_id=UTX04925.1;transl_table=11 CP101611.1 Genbank pseudogene 3706573 3707969 . - . ID=gene-NM058_19020;Name=gmuD;gbkey=Gene;gene=gmuD;gene_biotype=pseudogene;locus_tag=NM058_19020;pseudo=true CP101611.1 Protein Homology CDS 3706573 3707969 . - 0 ID=cds-NM058_19020;Parent=gene-NM058_19020;Note=frameshifted;gbkey=CDS;gene=gmuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388465.1;locus_tag=NM058_19020;product=6-phospho-beta-glucosidase GmuD;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3707988 3709313 . - . ID=gene-NM058_19025;Name=celB;gbkey=Gene;gene=celB;gene_biotype=protein_coding;locus_tag=NM058_19025 CP101611.1 Protein Homology CDS 3707988 3709313 . - 0 ID=cds-UTX04926.1;Parent=gene-NM058_19025;Dbxref=NCBI_GP:UTX04926.1;Name=UTX04926.1;Ontology_term=GO:0009401,GO:0008982,GO:0019191;gbkey=CDS;gene=celB;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,cellobiose transmembrane transporter activity|0019191||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388464.1;locus_tag=NM058_19025;product=PTS cellobiose transporter subunit IIC;protein_id=UTX04926.1;transl_table=11 CP101611.1 Genbank gene 3709332 3709664 . - . ID=gene-NM058_19030;Name=NM058_19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19030 CP101611.1 Protein Homology CDS 3709332 3709664 . - 0 ID=cds-UTX04927.1;Parent=gene-NM058_19030;Dbxref=NCBI_GP:UTX04927.1;Name=UTX04927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388463.2;locus_tag=NM058_19030;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=UTX04927.1;transl_table=11 CP101611.1 Genbank gene 3709664 3709975 . - . ID=gene-NM058_19035;Name=NM058_19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19035 CP101611.1 Protein Homology CDS 3709664 3709975 . - 0 ID=cds-UTX04928.1;Parent=gene-NM058_19035;Dbxref=NCBI_GP:UTX04928.1;Name=UTX04928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388462.1;locus_tag=NM058_19035;product=PTS sugar transporter subunit IIB;protein_id=UTX04928.1;transl_table=11 CP101611.1 cmsearch riboswitch 3710152 3710251 . + . ID=id-CP101611.1:3710152..3710251;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 3710306 3711472 . + . ID=gene-NM058_19040;Name=pbuE;gbkey=Gene;gene=pbuE;gene_biotype=protein_coding;locus_tag=NM058_19040 CP101611.1 Protein Homology CDS 3710306 3711472 . + 0 ID=cds-UTX04929.1;Parent=gene-NM058_19040;Dbxref=NCBI_GP:UTX04929.1;Name=UTX04929.1;gbkey=CDS;gene=pbuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388461.2;locus_tag=NM058_19040;product=purine transporter PbuE;protein_id=UTX04929.1;transl_table=11 CP101611.1 Genbank gene 3711486 3712055 . - . ID=gene-NM058_19045;Name=NM058_19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19045 CP101611.1 Protein Homology CDS 3711486 3712055 . - 0 ID=cds-UTX04930.1;Parent=gene-NM058_19045;Dbxref=NCBI_GP:UTX04930.1;Name=UTX04930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019712449.1;locus_tag=NM058_19045;product=YdhK family protein;protein_id=UTX04930.1;transl_table=11 CP101611.1 Genbank gene 3712263 3713240 . - . ID=gene-NM058_19050;Name=NM058_19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19050 CP101611.1 Protein Homology CDS 3712263 3713240 . - 0 ID=cds-UTX04931.1;Parent=gene-NM058_19050;Dbxref=NCBI_GP:UTX04931.1;Name=UTX04931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002201436.1;locus_tag=NM058_19050;product=HD domain-containing protein;protein_id=UTX04931.1;transl_table=11 CP101611.1 Genbank gene 3713326 3713814 . + . ID=gene-NM058_19055;Name=NM058_19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19055 CP101611.1 Protein Homology CDS 3713326 3713814 . + 0 ID=cds-UTX04932.1;Parent=gene-NM058_19055;Dbxref=NCBI_GP:UTX04932.1;Name=UTX04932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240623.1;locus_tag=NM058_19055;product=GNAT family N-acetyltransferase;protein_id=UTX04932.1;transl_table=11 CP101611.1 Genbank gene 3713824 3714309 . + . ID=gene-NM058_19060;Name=NM058_19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19060 CP101611.1 Protein Homology CDS 3713824 3714309 . + 0 ID=cds-UTX04933.1;Parent=gene-NM058_19060;Dbxref=NCBI_GP:UTX04933.1;Name=UTX04933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014112858.1;locus_tag=NM058_19060;product=YdhH/YoaO family protein;protein_id=UTX04933.1;transl_table=11 CP101611.1 Genbank gene 3714442 3714813 . - . ID=gene-NM058_19065;Name=NM058_19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19065 CP101611.1 Protein Homology CDS 3714442 3714813 . - 0 ID=cds-UTX04934.1;Parent=gene-NM058_19065;Dbxref=NCBI_GP:UTX04934.1;Name=UTX04934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388456.1;locus_tag=NM058_19065;product=iron chaperone;protein_id=UTX04934.1;transl_table=11 CP101611.1 Genbank gene 3715202 3716590 . + . ID=gene-NM058_19070;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=NM058_19070 CP101611.1 Protein Homology CDS 3715202 3716590 . + 0 ID=cds-UTX04935.1;Parent=gene-NM058_19070;Dbxref=NCBI_GP:UTX04935.1;Name=UTX04935.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388455.2;locus_tag=NM058_19070;product=alkaline phosphatase PhoB;protein_id=UTX04935.1;transl_table=11 CP101611.1 Genbank gene 3716656 3717366 . + . ID=gene-NM058_19075;Name=NM058_19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19075 CP101611.1 Protein Homology CDS 3716656 3717366 . + 0 ID=cds-UTX04936.1;Parent=gene-NM058_19075;Dbxref=NCBI_GP:UTX04936.1;Name=UTX04936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388454.1;locus_tag=NM058_19075;product=DUF4352 domain-containing protein;protein_id=UTX04936.1;transl_table=11 CP101611.1 Genbank gene 3717404 3718591 . - . ID=gene-NM058_19080;Name=NM058_19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19080 CP101611.1 Protein Homology CDS 3717404 3718591 . - 0 ID=cds-UTX04937.1;Parent=gene-NM058_19080;Dbxref=NCBI_GP:UTX04937.1;Name=UTX04937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388453.2;locus_tag=NM058_19080;product=glycosyltransferase;protein_id=UTX04937.1;transl_table=11 CP101611.1 Genbank gene 3718754 3720016 . - . ID=gene-NM058_19085;Name=NM058_19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19085 CP101611.1 Protein Homology CDS 3718754 3720016 . - 0 ID=cds-UTX04938.1;Parent=gene-NM058_19085;Dbxref=NCBI_GP:UTX04938.1;Name=UTX04938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388452.2;locus_tag=NM058_19085;product=glycoside hydrolase family 18 protein;protein_id=UTX04938.1;transl_table=11 CP101611.1 Genbank gene 3720144 3720818 . - . ID=gene-NM058_19090;Name=NM058_19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19090 CP101611.1 Protein Homology CDS 3720144 3720818 . - 0 ID=cds-UTX04939.1;Parent=gene-NM058_19090;Dbxref=NCBI_GP:UTX04939.1;Name=UTX04939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388451.1;locus_tag=NM058_19090;product=GntR family transcriptional regulator;protein_id=UTX04939.1;transl_table=11 CP101611.1 Genbank gene 3721052 3721789 . + . ID=gene-NM058_19095;Name=NM058_19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19095 CP101611.1 Protein Homology CDS 3721052 3721789 . + 0 ID=cds-UTX04940.1;Parent=gene-NM058_19095;Dbxref=NCBI_GP:UTX04940.1;Name=UTX04940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388450.2;locus_tag=NM058_19095;product=sulfite exporter TauE/SafE family protein;protein_id=UTX04940.1;transl_table=11 CP101611.1 Genbank gene 3721828 3722175 . - . ID=gene-NM058_19100;Name=NM058_19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19100 CP101611.1 GeneMarkS-2+ CDS 3721828 3722175 . - 0 ID=cds-UTX04941.1;Parent=gene-NM058_19100;Dbxref=NCBI_GP:UTX04941.1;Name=UTX04941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_19100;product=hypothetical protein;protein_id=UTX04941.1;transl_table=11 CP101611.1 Genbank gene 3722154 3723035 . - . ID=gene-NM058_19105;Name=NM058_19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19105 CP101611.1 Protein Homology CDS 3722154 3723035 . - 0 ID=cds-UTX04942.1;Parent=gene-NM058_19105;Dbxref=NCBI_GP:UTX04942.1;Name=UTX04942.1;Ontology_term=GO:0042908,GO:0042910;gbkey=CDS;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=NM058_19105;product=Bcr/CflA family efflux MFS transporter;protein_id=UTX04942.1;transl_table=11 CP101611.1 Genbank gene 3723230 3723553 . - . ID=gene-NM058_19110;Name=NM058_19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19110 CP101611.1 Protein Homology CDS 3723230 3723553 . - 0 ID=cds-UTX04943.1;Parent=gene-NM058_19110;Dbxref=NCBI_GP:UTX04943.1;Name=UTX04943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240611.1;locus_tag=NM058_19110;product=AzlD domain-containing protein;protein_id=UTX04943.1;transl_table=11 CP101611.1 Genbank gene 3723550 3724275 . - . ID=gene-NM058_19115;Name=NM058_19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19115 CP101611.1 Protein Homology CDS 3723550 3724275 . - 0 ID=cds-UTX04944.1;Parent=gene-NM058_19115;Dbxref=NCBI_GP:UTX04944.1;Name=UTX04944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010333179.1;locus_tag=NM058_19115;product=AzlC family ABC transporter permease;protein_id=UTX04944.1;transl_table=11 CP101611.1 Genbank gene 3724394 3724951 . + . ID=gene-NM058_19120;Name=NM058_19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19120 CP101611.1 Protein Homology CDS 3724394 3724951 . + 0 ID=cds-UTX04945.1;Parent=gene-NM058_19120;Dbxref=NCBI_GP:UTX04945.1;Name=UTX04945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010333178.1;locus_tag=NM058_19120;product=helix-turn-helix domain-containing protein;protein_id=UTX04945.1;transl_table=11 CP101611.1 Genbank gene 3725036 3725530 . + . ID=gene-NM058_19125;Name=NM058_19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19125 CP101611.1 Protein Homology CDS 3725036 3725530 . + 0 ID=cds-UTX04946.1;Parent=gene-NM058_19125;Dbxref=NCBI_GP:UTX04946.1;Name=UTX04946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388448.1;locus_tag=NM058_19125;product=MarR family transcriptional regulator;protein_id=UTX04946.1;transl_table=11 CP101611.1 Genbank gene 3725546 3726175 . + . ID=gene-NM058_19130;Name=NM058_19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19130 CP101611.1 Protein Homology CDS 3725546 3726175 . + 0 ID=cds-UTX04947.1;Parent=gene-NM058_19130;Dbxref=NCBI_GP:UTX04947.1;Name=UTX04947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388447.1;locus_tag=NM058_19130;product=nitroreductase family protein;protein_id=UTX04947.1;transl_table=11 CP101611.1 Genbank gene 3726213 3726953 . - . ID=gene-NM058_19135;Name=NM058_19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19135 CP101611.1 Protein Homology CDS 3726213 3726953 . - 0 ID=cds-UTX04948.1;Parent=gene-NM058_19135;Dbxref=NCBI_GP:UTX04948.1;Name=UTX04948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017426073.1;locus_tag=NM058_19135;product=SDR family oxidoreductase;protein_id=UTX04948.1;transl_table=11 CP101611.1 Genbank gene 3726974 3727576 . - . ID=gene-NM058_19140;Name=NM058_19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19140 CP101611.1 Protein Homology CDS 3726974 3727576 . - 0 ID=cds-UTX04949.1;Parent=gene-NM058_19140;Dbxref=NCBI_GP:UTX04949.1;Name=UTX04949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257614.1;locus_tag=NM058_19140;product=TetR/AcrR family transcriptional regulator;protein_id=UTX04949.1;transl_table=11 CP101611.1 Genbank gene 3727713 3730370 . - . ID=gene-NM058_19145;Name=NM058_19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19145 CP101611.1 Protein Homology CDS 3727713 3730370 . - 0 ID=cds-UTX04950.1;Parent=gene-NM058_19145;Dbxref=NCBI_GP:UTX04950.1;Name=UTX04950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388446.1;locus_tag=NM058_19145;product=MMPL family transporter;protein_id=UTX04950.1;transl_table=11 CP101611.1 Genbank gene 3730367 3730825 . - . ID=gene-NM058_19150;Name=NM058_19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19150 CP101611.1 Protein Homology CDS 3730367 3730825 . - 0 ID=cds-UTX07100.1;Parent=gene-NM058_19150;Dbxref=NCBI_GP:UTX07100.1;Name=UTX07100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388445.1;locus_tag=NM058_19150;product=MarR family transcriptional regulator;protein_id=UTX07100.1;transl_table=11 CP101611.1 Genbank gene 3730991 3731509 . + . ID=gene-NM058_19155;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=NM058_19155 CP101611.1 Protein Homology CDS 3730991 3731509 . + 0 ID=cds-UTX04951.1;Parent=gene-NM058_19155;Dbxref=NCBI_GP:UTX04951.1;Name=UTX04951.1;gbkey=CDS;gene=dinB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388444.1;locus_tag=NM058_19155;product=damage-inducible protein DinB;protein_id=UTX04951.1;transl_table=11 CP101611.1 Genbank gene 3731685 3733061 . + . ID=gene-NM058_19160;Name=NM058_19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19160 CP101611.1 Protein Homology CDS 3731685 3733061 . + 0 ID=cds-UTX04952.1;Parent=gene-NM058_19160;Dbxref=NCBI_GP:UTX04952.1;Name=UTX04952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388443.1;locus_tag=NM058_19160;product=amino acid permease;protein_id=UTX04952.1;transl_table=11 CP101611.1 Genbank gene 3733384 3735009 . + . ID=gene-NM058_19165;Name=vmlR;gbkey=Gene;gene=vmlR;gene_biotype=protein_coding;locus_tag=NM058_19165 CP101611.1 Protein Homology CDS 3733384 3735009 . + 0 ID=cds-UTX04953.1;Parent=gene-NM058_19165;Dbxref=NCBI_GP:UTX04953.1;Name=UTX04953.1;gbkey=CDS;gene=vmlR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240600.1;locus_tag=NM058_19165;product=ABC-F type ribosomal protection protein VmlR;protein_id=UTX04953.1;transl_table=11 CP101611.1 Genbank pseudogene 3735161 3735283 . + . ID=gene-NM058_19170;Name=NM058_19170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19170;pseudo=true CP101611.1 Protein Homology CDS 3735161 3735283 . + 0 ID=cds-NM058_19170;Parent=gene-NM058_19170;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019155452.1;locus_tag=NM058_19170;product=Hsp20/alpha crystallin family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3735339 3736160 . - . ID=gene-NM058_19175;Name=NM058_19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19175 CP101611.1 Protein Homology CDS 3735339 3736160 . - 0 ID=cds-UTX04954.1;Parent=gene-NM058_19175;Dbxref=NCBI_GP:UTX04954.1;Name=UTX04954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014112834.1;locus_tag=NM058_19175;product=sugar phosphate isomerase/epimerase;protein_id=UTX04954.1;transl_table=11 CP101611.1 Genbank pseudogene 3736176 3737518 . - . ID=gene-NM058_19180;Name=NM058_19180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19180;pseudo=true CP101611.1 Protein Homology CDS 3736176 3737518 . - 0 ID=cds-NM058_19180;Parent=gene-NM058_19180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257608.1;locus_tag=NM058_19180;product=sugar porter family MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3737606 3738610 . - . ID=gene-NM058_19185;Name=NM058_19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19185 CP101611.1 Protein Homology CDS 3737606 3738610 . - 0 ID=cds-UTX04955.1;Parent=gene-NM058_19185;Dbxref=NCBI_GP:UTX04955.1;Name=UTX04955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014112832.1;locus_tag=NM058_19185;product=LacI family transcriptional regulator;protein_id=UTX04955.1;transl_table=11 CP101611.1 Genbank gene 3738704 3739729 . - . ID=gene-NM058_19190;Name=NM058_19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19190 CP101611.1 Protein Homology CDS 3738704 3739729 . - 0 ID=cds-UTX04956.1;Parent=gene-NM058_19190;Dbxref=NCBI_GP:UTX04956.1;Name=UTX04956.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240590.1;locus_tag=NM058_19190;product=Gfo/Idh/MocA family oxidoreductase;protein_id=UTX04956.1;transl_table=11 CP101611.1 Genbank pseudogene 3740081 3740391 . + . ID=gene-NM058_19195;Name=NM058_19195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19195;pseudo=true CP101611.1 Protein Homology CDS 3740081 3740391 . + 0 ID=cds-NM058_19195;Parent=gene-NM058_19195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006638585.1;locus_tag=NM058_19195;product=HIT domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3740402 3740875 . - . ID=gene-NM058_19200;Name=NM058_19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19200 CP101611.1 Protein Homology CDS 3740402 3740875 . - 0 ID=cds-UTX04957.1;Parent=gene-NM058_19200;Dbxref=NCBI_GP:UTX04957.1;Name=UTX04957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388441.1;locus_tag=NM058_19200;product=GNAT family N-acetyltransferase;protein_id=UTX04957.1;transl_table=11 CP101611.1 Genbank gene 3741027 3741371 . - . ID=gene-NM058_19205;Name=NM058_19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19205 CP101611.1 Protein Homology CDS 3741027 3741371 . - 0 ID=cds-UTX04958.1;Parent=gene-NM058_19205;Dbxref=NCBI_GP:UTX04958.1;Name=UTX04958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388440.1;locus_tag=NM058_19205;product=DoxX family protein;protein_id=UTX04958.1;transl_table=11 CP101611.1 Genbank gene 3741368 3741967 . - . ID=gene-NM058_19210;Name=NM058_19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19210 CP101611.1 Protein Homology CDS 3741368 3741967 . - 0 ID=cds-UTX04959.1;Parent=gene-NM058_19210;Dbxref=NCBI_GP:UTX04959.1;Name=UTX04959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017695987.1;locus_tag=NM058_19210;product=TetR/AcrR family transcriptional regulator;protein_id=UTX04959.1;transl_table=11 CP101611.1 Genbank gene 3742281 3742916 . - . ID=gene-NM058_19215;Name=NM058_19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19215 CP101611.1 Protein Homology CDS 3742281 3742916 . - 0 ID=cds-UTX04960.1;Parent=gene-NM058_19215;Dbxref=NCBI_GP:UTX04960.1;Name=UTX04960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003225329.1;locus_tag=NM058_19215;product=FMN-binding negative transcriptional regulator;protein_id=UTX04960.1;transl_table=11 CP101611.1 Genbank gene 3743062 3744447 . + . ID=gene-NM058_19220;Name=NM058_19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19220 CP101611.1 Protein Homology CDS 3743062 3744447 . + 0 ID=cds-UTX04961.1;Parent=gene-NM058_19220;Dbxref=NCBI_GP:UTX04961.1;Name=UTX04961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003225328.1;locus_tag=NM058_19220;product=PLP-dependent aminotransferase family protein;protein_id=UTX04961.1;transl_table=11 CP101611.1 Genbank gene 3744514 3744852 . - . ID=gene-NM058_19225;Name=NM058_19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19225 CP101611.1 Protein Homology CDS 3744514 3744852 . - 0 ID=cds-UTX04962.1;Parent=gene-NM058_19225;Dbxref=NCBI_GP:UTX04962.1;Name=UTX04962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388432.1;locus_tag=NM058_19225;product=thioredoxin family protein;protein_id=UTX04962.1;transl_table=11 CP101611.1 Genbank gene 3745041 3745430 . - . ID=gene-NM058_19230;Name=NM058_19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19230 CP101611.1 Protein Homology CDS 3745041 3745430 . - 0 ID=cds-UTX04963.1;Parent=gene-NM058_19230;Dbxref=NCBI_GP:UTX04963.1;Name=UTX04963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388431.1;locus_tag=NM058_19230;product=DoxX family protein;protein_id=UTX04963.1;transl_table=11 CP101611.1 Genbank gene 3745569 3746507 . - . ID=gene-NM058_19235;Name=NM058_19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19235 CP101611.1 Protein Homology CDS 3745569 3746507 . - 0 ID=cds-UTX04964.1;Parent=gene-NM058_19235;Dbxref=NCBI_GP:UTX04964.1;Name=UTX04964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388430.1;locus_tag=NM058_19235;product=ring-cleaving dioxygenase;protein_id=UTX04964.1;transl_table=11 CP101611.1 Genbank gene 3746535 3747155 . - . ID=gene-NM058_19240;Name=NM058_19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19240 CP101611.1 Protein Homology CDS 3746535 3747155 . - 0 ID=cds-UTX04965.1;Parent=gene-NM058_19240;Dbxref=NCBI_GP:UTX04965.1;Name=UTX04965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388429.1;locus_tag=NM058_19240;product=nitroreductase family protein;protein_id=UTX04965.1;transl_table=11 CP101611.1 Genbank pseudogene 3747655 3748549 . + . ID=gene-NM058_19245;Name=mneP;gbkey=Gene;gene=mneP;gene_biotype=pseudogene;locus_tag=NM058_19245;pseudo=true CP101611.1 Protein Homology CDS 3747655 3748549 . + 0 ID=cds-NM058_19245;Parent=gene-NM058_19245;Note=frameshifted;gbkey=CDS;gene=mneP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388428.2;locus_tag=NM058_19245;product=manganese transporter MneP;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3748704 3749516 . + . ID=gene-NM058_19250;Name=NM058_19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19250 CP101611.1 Protein Homology CDS 3748704 3749516 . + 0 ID=cds-UTX04966.1;Parent=gene-NM058_19250;Dbxref=NCBI_GP:UTX04966.1;Name=UTX04966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388427.1;locus_tag=NM058_19250;product=MerR family transcriptional regulator;protein_id=UTX04966.1;transl_table=11 CP101611.1 Genbank gene 3749608 3750297 . + . ID=gene-NM058_19255;Name=NM058_19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19255 CP101611.1 Protein Homology CDS 3749608 3750297 . + 0 ID=cds-UTX04967.1;Parent=gene-NM058_19255;Dbxref=NCBI_GP:UTX04967.1;Name=UTX04967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388426.1;locus_tag=NM058_19255;product=DUF554 domain-containing protein;protein_id=UTX04967.1;transl_table=11 CP101611.1 Genbank gene 3750350 3752524 . - . ID=gene-NM058_19260;Name=NM058_19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19260 CP101611.1 Protein Homology CDS 3750350 3752524 . - 0 ID=cds-UTX04968.1;Parent=gene-NM058_19260;Dbxref=NCBI_GP:UTX04968.1;Name=UTX04968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388424.1;locus_tag=NM058_19260;product=MMPL family transporter;protein_id=UTX04968.1;transl_table=11 CP101611.1 Genbank gene 3752645 3753286 . - . ID=gene-NM058_19265;Name=ydfI;gbkey=Gene;gene=ydfI;gene_biotype=protein_coding;locus_tag=NM058_19265 CP101611.1 Protein Homology CDS 3752645 3753286 . - 0 ID=cds-UTX04969.1;Parent=gene-NM058_19265;Dbxref=NCBI_GP:UTX04969.1;Name=UTX04969.1;gbkey=CDS;gene=ydfI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019713424.1;locus_tag=NM058_19265;product=two-component system response regulator YdfI;protein_id=UTX04969.1;transl_table=11 CP101611.1 Genbank gene 3753279 3754502 . - . ID=gene-NM058_19270;Name=NM058_19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19270 CP101611.1 Protein Homology CDS 3753279 3754502 . - 0 ID=cds-UTX04970.1;Parent=gene-NM058_19270;Dbxref=NCBI_GP:UTX04970.1;Name=UTX04970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388422.1;locus_tag=NM058_19270;product=sensor histidine kinase;protein_id=UTX04970.1;transl_table=11 CP101611.1 Genbank gene 3754775 3754924 . + . ID=gene-NM058_19275;Name=NM058_19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19275 CP101611.1 Protein Homology CDS 3754775 3754924 . + 0 ID=cds-UTX04971.1;Parent=gene-NM058_19275;Dbxref=NCBI_GP:UTX04971.1;Name=UTX04971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097686.1;locus_tag=NM058_19275;product=hypothetical protein;protein_id=UTX04971.1;transl_table=11 CP101611.1 Genbank gene 3754921 3755097 . + . ID=gene-NM058_19280;Name=NM058_19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19280 CP101611.1 Protein Homology CDS 3754921 3755097 . + 0 ID=cds-UTX04972.1;Parent=gene-NM058_19280;Dbxref=NCBI_GP:UTX04972.1;Name=UTX04972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097685.1;locus_tag=NM058_19280;product=hypothetical protein;protein_id=UTX04972.1;transl_table=11 CP101611.1 Genbank gene 3755187 3755624 . + . ID=gene-NM058_19285;Name=NM058_19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19285 CP101611.1 Protein Homology CDS 3755187 3755624 . + 0 ID=cds-UTX04973.1;Parent=gene-NM058_19285;Dbxref=NCBI_GP:UTX04973.1;Name=UTX04973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240554.1;locus_tag=NM058_19285;product=carboxymuconolactone decarboxylase family protein;protein_id=UTX04973.1;transl_table=11 CP101611.1 Genbank pseudogene 3755713 3756391 . - . ID=gene-NM058_19290;Name=NM058_19290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19290;pseudo=true CP101611.1 Protein Homology CDS 3755713 3756391 . - 0 ID=cds-NM058_19290;Parent=gene-NM058_19290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388420.1;locus_tag=NM058_19290;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3756482 3757099 . + . ID=gene-NM058_19295;Name=NM058_19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19295 CP101611.1 Protein Homology CDS 3756482 3757099 . + 0 ID=cds-UTX04974.1;Parent=gene-NM058_19295;Dbxref=NCBI_GP:UTX04974.1;Name=UTX04974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388419.1;locus_tag=NM058_19295;product=flavin reductase family protein;protein_id=UTX04974.1;transl_table=11 CP101611.1 Genbank gene 3757178 3758602 . - . ID=gene-NM058_19300;Name=NM058_19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19300 CP101611.1 Protein Homology CDS 3757178 3758602 . - 0 ID=cds-UTX04975.1;Parent=gene-NM058_19300;Dbxref=NCBI_GP:UTX04975.1;Name=UTX04975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015240979.1;locus_tag=NM058_19300;product=PLP-dependent aminotransferase family protein;protein_id=UTX04975.1;transl_table=11 CP101611.1 Genbank pseudogene 3758760 3759679 . + . ID=gene-NM058_19305;Name=NM058_19305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19305;pseudo=true CP101611.1 Protein Homology CDS 3758760 3759679 . + 0 ID=cds-NM058_19305;Parent=gene-NM058_19305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388417.1;locus_tag=NM058_19305;product=DMT family transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3759915 3760541 . - . ID=gene-NM058_19310;Name=NM058_19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19310 CP101611.1 Protein Homology CDS 3759915 3760541 . - 0 ID=cds-UTX04976.1;Parent=gene-NM058_19310;Dbxref=NCBI_GP:UTX04976.1;Name=UTX04976.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024803.2;locus_tag=NM058_19310;product=MerR family transcriptional regulator;protein_id=UTX04976.1;transl_table=11 CP101611.1 Genbank gene 3760691 3761989 . - . ID=gene-NM058_19315;Name=NM058_19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19315 CP101611.1 Protein Homology CDS 3760691 3761989 . - 0 ID=cds-UTX04977.1;Parent=gene-NM058_19315;Dbxref=NCBI_GP:UTX04977.1;Name=UTX04977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240543.1;locus_tag=NM058_19315;product=arsenical efflux pump membrane protein ArsB;protein_id=UTX04977.1;transl_table=11 CP101611.1 Genbank gene 3762002 3762349 . - . ID=gene-NM058_19320;Name=NM058_19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19320 CP101611.1 Protein Homology CDS 3762002 3762349 . - 0 ID=cds-UTX04978.1;Parent=gene-NM058_19320;Dbxref=NCBI_GP:UTX04978.1;Name=UTX04978.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388414.1;locus_tag=NM058_19320;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=UTX04978.1;transl_table=11 CP101611.1 Genbank gene 3762404 3764056 . - . ID=gene-NM058_19325;Name=NM058_19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19325 CP101611.1 Protein Homology CDS 3762404 3764056 . - 0 ID=cds-UTX04979.1;Parent=gene-NM058_19325;Dbxref=NCBI_GP:UTX04979.1;Name=UTX04979.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240539.1;locus_tag=NM058_19325;product=FAD-dependent oxidoreductase;protein_id=UTX04979.1;transl_table=11 CP101611.1 Genbank pseudogene 3764404 3764569 . + . ID=gene-NM058_19330;Name=NM058_19330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19330;pseudo=true CP101611.1 Protein Homology CDS 3764404 3764569 . + 0 ID=cds-NM058_19330;Parent=gene-NM058_19330;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006638817.1;locus_tag=NM058_19330;product=winged helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3764691 3765563 . - . ID=gene-NM058_19335;Name=NM058_19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19335 CP101611.1 Protein Homology CDS 3764691 3765563 . - 0 ID=cds-UTX04980.1;Parent=gene-NM058_19335;Dbxref=NCBI_GP:UTX04980.1;Name=UTX04980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388409.1;locus_tag=NM058_19335;product=YitT family protein;protein_id=UTX04980.1;transl_table=11 CP101611.1 Genbank gene 3765931 3766260 . + . ID=gene-NM058_19340;Name=NM058_19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19340 CP101611.1 Protein Homology CDS 3765931 3766260 . + 0 ID=cds-UTX04981.1;Parent=gene-NM058_19340;Dbxref=NCBI_GP:UTX04981.1;Name=UTX04981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003225267.1;locus_tag=NM058_19340;product=winged helix-turn-helix transcriptional regulator;protein_id=UTX04981.1;transl_table=11 CP101611.1 Genbank gene 3766344 3766916 . + . ID=gene-NM058_19345;Name=NM058_19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19345 CP101611.1 Protein Homology CDS 3766344 3766916 . + 0 ID=cds-UTX04982.1;Parent=gene-NM058_19345;Dbxref=NCBI_GP:UTX04982.1;Name=UTX04982.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388407.1;locus_tag=NM058_19345;product=alpha/beta hydrolase;protein_id=UTX04982.1;transl_table=11 CP101611.1 Genbank gene 3766968 3767393 . - . ID=gene-NM058_19350;Name=NM058_19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19350 CP101611.1 Protein Homology CDS 3766968 3767393 . - 0 ID=cds-UTX04983.1;Parent=gene-NM058_19350;Dbxref=NCBI_GP:UTX04983.1;Name=UTX04983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388406.1;locus_tag=NM058_19350;product=MaoC family dehydratase;protein_id=UTX04983.1;transl_table=11 CP101611.1 Genbank gene 3767841 3769232 . - . ID=gene-NM058_19355;Name=NM058_19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19355 CP101611.1 Protein Homology CDS 3767841 3769232 . - 0 ID=cds-UTX04984.1;Parent=gene-NM058_19355;Dbxref=NCBI_GP:UTX04984.1;Name=UTX04984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388405.1;locus_tag=NM058_19355;product=PLP-dependent aminotransferase family protein;protein_id=UTX04984.1;transl_table=11 CP101611.1 Genbank pseudogene 3769387 3770242 . + . ID=gene-NM058_19360;Name=NM058_19360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19360;pseudo=true CP101611.1 Protein Homology CDS 3769387 3770242 . + 0 ID=cds-NM058_19360;Parent=gene-NM058_19360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388404.1;locus_tag=NM058_19360;product=DMT family transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3770386 3770796 . - . ID=gene-NM058_19365;Name=NM058_19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19365 CP101611.1 Protein Homology CDS 3770386 3770796 . - 0 ID=cds-UTX04985.1;Parent=gene-NM058_19365;Dbxref=NCBI_GP:UTX04985.1;Name=UTX04985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003246601.1;locus_tag=NM058_19365;product=Lrp/AsnC family transcriptional regulator;protein_id=UTX04985.1;transl_table=11 CP101611.1 Genbank gene 3771037 3771798 . + . ID=gene-NM058_19370;Name=NM058_19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19370 CP101611.1 Protein Homology CDS 3771037 3771798 . + 0 ID=cds-UTX04986.1;Parent=gene-NM058_19370;Dbxref=NCBI_GP:UTX04986.1;Name=UTX04986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240521.1;locus_tag=NM058_19370;product=MBL fold metallo-hydrolase;protein_id=UTX04986.1;transl_table=11 CP101611.1 Genbank pseudogene 3772087 3773474 . - . ID=gene-NM058_19375;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=pseudogene;locus_tag=NM058_19375;pseudo=true CP101611.1 Protein Homology CDS 3772087 3773474 . - 0 ID=cds-NM058_19375;Parent=gene-NM058_19375;Note=frameshifted;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010335035.1;locus_tag=NM058_19375;product=class II fumarate hydratase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3773644 3774534 . + . ID=gene-NM058_19380;Name=NM058_19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19380 CP101611.1 Protein Homology CDS 3773644 3774534 . + 0 ID=cds-UTX04987.1;Parent=gene-NM058_19380;Dbxref=NCBI_GP:UTX04987.1;Name=UTX04987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014480326.1;locus_tag=NM058_19380;product=LysR family transcriptional regulator;protein_id=UTX04987.1;transl_table=11 CP101611.1 Genbank gene 3775281 3776639 . - . ID=gene-NM058_19385;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=NM058_19385 CP101611.1 Protein Homology CDS 3775281 3776639 . - 0 ID=cds-UTX04988.1;Parent=gene-NM058_19385;Dbxref=NCBI_GP:UTX04988.1;Name=UTX04988.1;Ontology_term=GO:0015803,GO:0015658;gbkey=CDS;gene=brnQ;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240513.1;locus_tag=NM058_19385;product=branched-chain amino acid transport system II carrier protein;protein_id=UTX04988.1;transl_table=11 CP101611.1 Genbank gene 3777083 3777664 . - . ID=gene-NM058_19390;Name=NM058_19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19390 CP101611.1 Protein Homology CDS 3777083 3777664 . - 0 ID=cds-UTX04989.1;Parent=gene-NM058_19390;Dbxref=NCBI_GP:UTX04989.1;Name=UTX04989.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017365.2;locus_tag=NM058_19390;product=proline racemase family protein;protein_id=UTX04989.1;transl_table=11 CP101611.1 Genbank gene 3777661 3778065 . - . ID=gene-NM058_19395;Name=NM058_19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19395 CP101611.1 Protein Homology CDS 3777661 3778065 . - 0 ID=cds-UTX04990.1;Parent=gene-NM058_19395;Dbxref=NCBI_GP:UTX04990.1;Name=UTX04990.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017365.2;locus_tag=NM058_19395;product=proline racemase family protein;protein_id=UTX04990.1;transl_table=11 CP101611.1 Genbank gene 3778268 3779644 . + . ID=gene-NM058_19400;Name=NM058_19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19400 CP101611.1 Protein Homology CDS 3778268 3779644 . + 0 ID=cds-UTX04991.1;Parent=gene-NM058_19400;Dbxref=NCBI_GP:UTX04991.1;Name=UTX04991.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003210260.1;locus_tag=NM058_19400;product=sigma 54-interacting transcriptional regulator;protein_id=UTX04991.1;transl_table=11 CP101611.1 Genbank gene 3780008 3780865 . + . ID=gene-NM058_19405;Name=NM058_19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19405 CP101611.1 Protein Homology CDS 3780008 3780865 . + 0 ID=cds-UTX04992.1;Parent=gene-NM058_19405;Dbxref=NCBI_GP:UTX04992.1;Name=UTX04992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240507.1;locus_tag=NM058_19405;product=YitT family protein;protein_id=UTX04992.1;transl_table=11 CP101611.1 Genbank pseudogene 3781563 3782263 . + . ID=gene-NM058_19410;Name=NM058_19410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19410;pseudo=true CP101611.1 Protein Homology CDS 3781563 3782263 . + 0 ID=cds-NM058_19410;Parent=gene-NM058_19410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003183080.1;locus_tag=NM058_19410;product=response regulator transcription factor;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3782267 3783722 . + . ID=gene-NM058_19415;Name=NM058_19415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19415;pseudo=true CP101611.1 Protein Homology CDS 3782267 3783722 . + 0 ID=cds-NM058_19415;Parent=gene-NM058_19415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018672553.1;locus_tag=NM058_19415;product=HAMP domain-containing histidine kinase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3783713 3784849 . + . ID=gene-NM058_19420;Name=NM058_19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19420 CP101611.1 Protein Homology CDS 3783713 3784849 . + 0 ID=cds-UTX07101.1;Parent=gene-NM058_19420;Dbxref=NCBI_GP:UTX07101.1;Name=UTX07101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014662937.1;locus_tag=NM058_19420;product=WD40 repeat domain-containing protein;protein_id=UTX07101.1;transl_table=11 CP101611.1 Genbank gene 3785111 3785941 . + . ID=gene-NM058_19425;Name=NM058_19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19425 CP101611.1 Protein Homology CDS 3785111 3785941 . + 0 ID=cds-UTX04993.1;Parent=gene-NM058_19425;Dbxref=NCBI_GP:UTX04993.1;Name=UTX04993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003183075.1;locus_tag=NM058_19425;product=polysaccharide deacetylase;protein_id=UTX04993.1;transl_table=11 CP101611.1 Genbank gene 3786173 3787060 . + . ID=gene-NM058_19430;Name=NM058_19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19430 CP101611.1 Protein Homology CDS 3786173 3787060 . + 0 ID=cds-UTX04994.1;Parent=gene-NM058_19430;Dbxref=NCBI_GP:UTX04994.1;Name=UTX04994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011198080.1;locus_tag=NM058_19430;product=LCP family protein;protein_id=UTX04994.1;transl_table=11 CP101611.1 Genbank gene 3787292 3788068 . - . ID=gene-NM058_19435;Name=NM058_19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19435 CP101611.1 Protein Homology CDS 3787292 3788068 . - 0 ID=cds-UTX04995.1;Parent=gene-NM058_19435;Dbxref=NCBI_GP:UTX04995.1;Name=UTX04995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014478964.1;locus_tag=NM058_19435;product=GNAT family N-acetyltransferase;protein_id=UTX04995.1;transl_table=11 CP101611.1 Genbank gene 3788106 3788651 . - . ID=gene-NM058_19440;Name=NM058_19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19440 CP101611.1 Protein Homology CDS 3788106 3788651 . - 0 ID=cds-UTX04996.1;Parent=gene-NM058_19440;Dbxref=NCBI_GP:UTX04996.1;Name=UTX04996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015252737.1;locus_tag=NM058_19440;product=TetR/AcrR family transcriptional regulator;protein_id=UTX04996.1;transl_table=11 CP101611.1 Genbank pseudogene 3788869 3789008 . + . ID=gene-NM058_19445;Name=NM058_19445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19445;pseudo=true CP101611.1 Protein Homology CDS 3788869 3789008 . + 0 ID=cds-NM058_19445;Parent=gene-NM058_19445;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019390989.1;locus_tag=NM058_19445;product=alpha/beta hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3789095 3789376 . + . ID=gene-NM058_19450;Name=NM058_19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19450 CP101611.1 Protein Homology CDS 3789095 3789376 . + 0 ID=cds-UTX04997.1;Parent=gene-NM058_19450;Dbxref=NCBI_GP:UTX04997.1;Name=UTX04997.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257559.1;locus_tag=NM058_19450;product=HPr family phosphocarrier protein;protein_id=UTX04997.1;transl_table=11 CP101611.1 Genbank gene 3789470 3790639 . + . ID=gene-NM058_19455;Name=NM058_19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19455 CP101611.1 Protein Homology CDS 3789470 3790639 . + 0 ID=cds-UTX04998.1;Parent=gene-NM058_19455;Dbxref=NCBI_GP:UTX04998.1;Name=UTX04998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257558.1;locus_tag=NM058_19455;product=MFS transporter;protein_id=UTX04998.1;transl_table=11 CP101611.1 Genbank gene 3790761 3791354 . - . ID=gene-NM058_19460;Name=NM058_19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19460 CP101611.1 Protein Homology CDS 3790761 3791354 . - 0 ID=cds-UTX07102.1;Parent=gene-NM058_19460;Dbxref=NCBI_GP:UTX07102.1;Name=UTX07102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388402.1;locus_tag=NM058_19460;product=YdeI family protein;protein_id=UTX07102.1;transl_table=11 CP101611.1 Genbank gene 3791937 3792314 . - . ID=gene-NM058_19465;Name=NM058_19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19465 CP101611.1 Protein Homology CDS 3791937 3792314 . - 0 ID=cds-UTX04999.1;Parent=gene-NM058_19465;Dbxref=NCBI_GP:UTX04999.1;Name=UTX04999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012116916.1;locus_tag=NM058_19465;product=hypothetical protein;protein_id=UTX04999.1;transl_table=11 CP101611.1 Genbank pseudogene 3792453 3792572 . - . ID=gene-NM058_19470;Name=NM058_19470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19470;pseudo=true CP101611.1 Protein Homology CDS 3792453 3792572 . - 0 ID=cds-NM058_19470;Parent=gene-NM058_19470;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001622542.1;locus_tag=NM058_19470;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3792799 3793687 . + . ID=gene-NM058_19475;Name=NM058_19475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19475;pseudo=true CP101611.1 Protein Homology CDS 3792799 3793687 . + 0 ID=cds-NM058_19475;Parent=gene-NM058_19475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240496.1;locus_tag=NM058_19475;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3794180 3794641 . + . ID=gene-NM058_19480;Name=NM058_19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19480 CP101611.1 Protein Homology CDS 3794180 3794641 . + 0 ID=cds-UTX05000.1;Parent=gene-NM058_19480;Dbxref=NCBI_GP:UTX05000.1;Name=UTX05000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017419208.1;locus_tag=NM058_19480;product=transcription factor YdeB;protein_id=UTX05000.1;transl_table=11 CP101611.1 Genbank gene 3795265 3795468 . - . ID=gene-NM058_19485;Name=cspC;gbkey=Gene;gene=cspC;gene_biotype=protein_coding;locus_tag=NM058_19485 CP101611.1 Protein Homology CDS 3795265 3795468 . - 0 ID=cds-UTX05001.1;Parent=gene-NM058_19485;Dbxref=NCBI_GP:UTX05001.1;Name=UTX05001.1;gbkey=CDS;gene=cspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003224086.1;locus_tag=NM058_19485;product=cold shock protein CspC;protein_id=UTX05001.1;transl_table=11 CP101611.1 Genbank pseudogene 3796041 3796957 . - . ID=gene-NM058_19490;Name=NM058_19490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19490;pseudo=true CP101611.1 Protein Homology CDS 3796041 3796957 . - 0 ID=cds-NM058_19490;Parent=gene-NM058_19490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257552.1;locus_tag=NM058_19490;product=DMT family transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3797328 3798536 . - . ID=gene-NM058_19495;Name=NM058_19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19495 CP101611.1 Protein Homology CDS 3797328 3798536 . - 0 ID=cds-UTX05002.1;Parent=gene-NM058_19495;Dbxref=NCBI_GP:UTX05002.1;Name=UTX05002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006637657.1;locus_tag=NM058_19495;product=MFS transporter;protein_id=UTX05002.1;transl_table=11 CP101611.1 Genbank gene 3798533 3799225 . - . ID=gene-NM058_19500;Name=NM058_19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19500 CP101611.1 Protein Homology CDS 3798533 3799225 . - 0 ID=cds-UTX05003.1;Parent=gene-NM058_19500;Dbxref=NCBI_GP:UTX05003.1;Name=UTX05003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006637658.1;locus_tag=NM058_19500;product=FadR family transcriptional regulator;protein_id=UTX05003.1;transl_table=11 CP101611.1 Genbank pseudogene 3799425 3799750 . - . ID=gene-NM058_19505;Name=NM058_19505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19505;pseudo=true CP101611.1 Protein Homology CDS 3799425 3799750 . - 0 ID=cds-NM058_19505;Parent=gene-NM058_19505;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388378.1;locus_tag=NM058_19505;product=lysozyme family protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3799747 3799964 . - . ID=gene-NM058_19510;Name=NM058_19510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19510;pseudo=true CP101611.1 Protein Homology CDS 3799747 3799964 . - 0 ID=cds-NM058_19510;Parent=gene-NM058_19510;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388377.1;locus_tag=NM058_19510;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3800481 3800837 . - . ID=gene-NM058_19515;Name=NM058_19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19515 CP101611.1 Protein Homology CDS 3800481 3800837 . - 0 ID=cds-UTX05004.1;Parent=gene-NM058_19515;Dbxref=NCBI_GP:UTX05004.1;Name=UTX05004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257547.1;locus_tag=NM058_19515;product=DUF2178 domain-containing protein;protein_id=UTX05004.1;transl_table=11 CP101611.1 Genbank gene 3800834 3801067 . - . ID=gene-NM058_19520;Name=NM058_19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19520 CP101611.1 Protein Homology CDS 3800834 3801067 . - 0 ID=cds-UTX05005.1;Parent=gene-NM058_19520;Dbxref=NCBI_GP:UTX05005.1;Name=UTX05005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240464.1;locus_tag=NM058_19520;product=helix-turn-helix transcriptional regulator;protein_id=UTX05005.1;transl_table=11 CP101611.1 Genbank pseudogene 3801758 3801859 . - . ID=gene-NM058_19525;Name=NM058_19525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19525;pseudo=true CP101611.1 Protein Homology CDS 3801758 3801859 . - 0 ID=cds-NM058_19525;Parent=gene-NM058_19525;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388380.1;locus_tag=NM058_19525;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3801863 3801996 . + . ID=gene-NM058_19530;Name=NM058_19530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19530;pseudo=true CP101611.1 Protein Homology CDS 3801863 3801996 . + 0 ID=cds-NM058_19530;Parent=gene-NM058_19530;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388361.1;locus_tag=NM058_19530;product=site-specific integrase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3801999 3802145 . - . ID=gene-NM058_19535;Name=NM058_19535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19535;pseudo=true CP101611.1 Protein Homology CDS 3801999 3802145 . - 0 ID=cds-NM058_19535;Parent=gene-NM058_19535;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388361.1;locus_tag=NM058_19535;product=site-specific integrase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3802596 3803534 . - . ID=gene-NM058_19540;Name=NM058_19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19540 CP101611.1 Protein Homology CDS 3802596 3803534 . - 0 ID=cds-UTX05006.1;Parent=gene-NM058_19540;Dbxref=NCBI_GP:UTX05006.1;Name=UTX05006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240459.1;locus_tag=NM058_19540;product=DMT family transporter;protein_id=UTX05006.1;transl_table=11 CP101611.1 Genbank gene 3803803 3805278 . + . ID=gene-NM058_19545;Name=NM058_19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19545 CP101611.1 Protein Homology CDS 3803803 3805278 . + 0 ID=cds-UTX07103.1;Parent=gene-NM058_19545;Dbxref=NCBI_GP:UTX07103.1;Name=UTX07103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010335029.1;locus_tag=NM058_19545;product=PLP-dependent aminotransferase family protein;protein_id=UTX07103.1;transl_table=11 CP101611.1 Genbank pseudogene 3805458 3805703 . - . ID=gene-NM058_19550;Name=NM058_19550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19550;pseudo=true CP101611.1 Protein Homology CDS 3805458 3805703 . - 0 ID=cds-NM058_19550;Parent=gene-NM058_19550;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388382.1;locus_tag=NM058_19550;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3806278 3807171 . + . ID=gene-NM058_19555;Name=NM058_19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19555 CP101611.1 Protein Homology CDS 3806278 3807171 . + 0 ID=cds-UTX05007.1;Parent=gene-NM058_19555;Dbxref=NCBI_GP:UTX05007.1;Name=UTX05007.1;Ontology_term=GO:0016020,GO:0016021;gbkey=CDS;go_component=membrane|0016020||IEA,integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240451.1;locus_tag=NM058_19555;product=EamA family transporter;protein_id=UTX05007.1;transl_table=11 CP101611.1 Genbank gene 3807302 3808126 . - . ID=gene-NM058_19560;Name=NM058_19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19560 CP101611.1 Protein Homology CDS 3807302 3808126 . - 0 ID=cds-UTX05008.1;Parent=gene-NM058_19560;Dbxref=NCBI_GP:UTX05008.1;Name=UTX05008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007430424.1;locus_tag=NM058_19560;product=NAD(P)H-binding protein;protein_id=UTX05008.1;transl_table=11 CP101611.1 Genbank gene 3808289 3809110 . + . ID=gene-NM058_19565;Name=NM058_19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19565 CP101611.1 Protein Homology CDS 3808289 3809110 . + 0 ID=cds-UTX05009.1;Parent=gene-NM058_19565;Dbxref=NCBI_GP:UTX05009.1;Name=UTX05009.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240447.1;locus_tag=NM058_19565;product=MerR family transcriptional regulator;protein_id=UTX05009.1;transl_table=11 CP101611.1 Genbank gene 3809730 3810278 . - . ID=gene-NM058_19570;Name=NM058_19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19570 CP101611.1 Protein Homology CDS 3809730 3810278 . - 0 ID=cds-UTX05010.1;Parent=gene-NM058_19570;Dbxref=NCBI_GP:UTX05010.1;Name=UTX05010.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015325.2;locus_tag=NM058_19570;product=NAD(P)H-dependent oxidoreductase;protein_id=UTX05010.1;transl_table=11 CP101611.1 Genbank gene 3810514 3811473 . - . ID=gene-NM058_19575;Name=NM058_19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19575 CP101611.1 Protein Homology CDS 3810514 3811473 . - 0 ID=cds-UTX05011.1;Parent=gene-NM058_19575;Dbxref=NCBI_GP:UTX05011.1;Name=UTX05011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010335037.1;locus_tag=NM058_19575;product=nitronate monooxygenase;protein_id=UTX05011.1;transl_table=11 CP101611.1 Genbank gene 3811646 3812071 . - . ID=gene-NM058_19580;Name=NM058_19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19580 CP101611.1 Protein Homology CDS 3811646 3812071 . - 0 ID=cds-UTX05012.1;Parent=gene-NM058_19580;Dbxref=NCBI_GP:UTX05012.1;Name=UTX05012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010335038.1;locus_tag=NM058_19580;product=MarR family transcriptional regulator;protein_id=UTX05012.1;transl_table=11 CP101611.1 Genbank pseudogene 3812657 3812808 . + . ID=gene-NM058_19585;Name=NM058_19585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19585;pseudo=true CP101611.1 Protein Homology CDS 3812657 3812808 . + 0 ID=cds-NM058_19585;Parent=gene-NM058_19585;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_036781213.1;locus_tag=NM058_19585;product=IS1595 family transposase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3812965 3813279 . + . ID=gene-NM058_19590;Name=NM058_19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19590 CP101611.1 Protein Homology CDS 3812965 3813279 . + 0 ID=cds-UTX05013.1;Parent=gene-NM058_19590;Dbxref=NCBI_GP:UTX05013.1;Name=UTX05013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011247323.1;locus_tag=NM058_19590;product=YfzA family protein;protein_id=UTX05013.1;transl_table=11 CP101611.1 Genbank gene 3813435 3813539 . - . ID=gene-NM058_19595;Name=NM058_19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19595 CP101611.1 Protein Homology CDS 3813435 3813539 . - 0 ID=cds-UTX07104.1;Parent=gene-NM058_19595;Dbxref=NCBI_GP:UTX07104.1;Name=UTX07104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388383.1;locus_tag=NM058_19595;product=phosphatase;protein_id=UTX07104.1;transl_table=11 CP101611.1 Genbank gene 3813711 3813794 . - . ID=gene-NM058_19600;Name=NM058_19600;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_19600 CP101611.1 tRNAscan-SE tRNA 3813711 3813794 . - . ID=rna-NM058_19600;Parent=gene-NM058_19600;anticodon=(pos:complement(3813759..3813761));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_19600;product=tRNA-Leu CP101611.1 tRNAscan-SE exon 3813711 3813794 . - . ID=exon-NM058_19600-1;Parent=rna-NM058_19600;anticodon=(pos:complement(3813759..3813761));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_19600;product=tRNA-Leu CP101611.1 Genbank gene 3813874 3813955 . - . ID=gene-NM058_19605;Name=NM058_19605;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_19605 CP101611.1 tRNAscan-SE tRNA 3813874 3813955 . - . ID=rna-NM058_19605;Parent=gene-NM058_19605;anticodon=(pos:complement(3813919..3813921));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_19605;product=tRNA-Leu CP101611.1 tRNAscan-SE exon 3813874 3813955 . - . ID=exon-NM058_19605-1;Parent=rna-NM058_19605;anticodon=(pos:complement(3813919..3813921));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_19605;product=tRNA-Leu CP101611.1 Genbank gene 3813967 3814042 . - . ID=gene-NM058_19610;Name=NM058_19610;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_19610 CP101611.1 tRNAscan-SE tRNA 3813967 3814042 . - . ID=rna-NM058_19610;Parent=gene-NM058_19610;anticodon=(pos:complement(3814007..3814009));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_19610;product=tRNA-Lys CP101611.1 tRNAscan-SE exon 3813967 3814042 . - . ID=exon-NM058_19610-1;Parent=rna-NM058_19610;anticodon=(pos:complement(3814007..3814009));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_19610;product=tRNA-Lys CP101611.1 Genbank gene 3814069 3814143 . - . ID=gene-NM058_19615;Name=NM058_19615;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_19615 CP101611.1 tRNAscan-SE tRNA 3814069 3814143 . - . ID=rna-NM058_19615;Parent=gene-NM058_19615;anticodon=(pos:complement(3814109..3814111));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_19615;product=tRNA-Gln CP101611.1 tRNAscan-SE exon 3814069 3814143 . - . ID=exon-NM058_19615-1;Parent=rna-NM058_19615;anticodon=(pos:complement(3814109..3814111));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_19615;product=tRNA-Gln CP101611.1 Genbank gene 3814156 3814227 . - . ID=gene-NM058_19620;Name=NM058_19620;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_19620 CP101611.1 tRNAscan-SE tRNA 3814156 3814227 . - . ID=rna-NM058_19620;Parent=gene-NM058_19620;anticodon=(pos:complement(3814192..3814194));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_19620;product=tRNA-Glu CP101611.1 tRNAscan-SE exon 3814156 3814227 . - . ID=exon-NM058_19620-1;Parent=rna-NM058_19620;anticodon=(pos:complement(3814192..3814194));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_19620;product=tRNA-Glu CP101611.1 Genbank gene 3814257 3814347 . - . ID=gene-NM058_19625;Name=NM058_19625;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_19625 CP101611.1 tRNAscan-SE tRNA 3814257 3814347 . - . ID=rna-NM058_19625;Parent=gene-NM058_19625;anticodon=(pos:complement(3814311..3814313));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_19625;product=tRNA-Ser CP101611.1 tRNAscan-SE exon 3814257 3814347 . - . ID=exon-NM058_19625-1;Parent=rna-NM058_19625;anticodon=(pos:complement(3814311..3814313));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_19625;product=tRNA-Ser CP101611.1 Genbank gene 3814352 3814426 . - . ID=gene-NM058_19630;Name=NM058_19630;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_19630 CP101611.1 tRNAscan-SE tRNA 3814352 3814426 . - . ID=rna-NM058_19630;Parent=gene-NM058_19630;anticodon=(pos:complement(3814392..3814394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_19630;product=tRNA-Asn CP101611.1 tRNAscan-SE exon 3814352 3814426 . - . ID=exon-NM058_19630-1;Parent=rna-NM058_19630;anticodon=(pos:complement(3814392..3814394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_19630;product=tRNA-Asn CP101611.1 Genbank gene 3814549 3815001 . - . ID=gene-NM058_19635;Name=NM058_19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19635 CP101611.1 Protein Homology CDS 3814549 3815001 . - 0 ID=cds-UTX05014.1;Parent=gene-NM058_19635;Dbxref=NCBI_GP:UTX05014.1;Name=UTX05014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388360.1;locus_tag=NM058_19635;product=SprT family protein;protein_id=UTX05014.1;transl_table=11 CP101611.1 Genbank gene 3815105 3815218 . + . ID=gene-NM058_19640;Name=cmpA;gbkey=Gene;gene=cmpA;gene_biotype=protein_coding;locus_tag=NM058_19640 CP101611.1 Protein Homology CDS 3815105 3815218 . + 0 ID=cds-UTX05015.1;Parent=gene-NM058_19640;Dbxref=NCBI_GP:UTX05015.1;Name=UTX05015.1;gbkey=CDS;gene=cmpA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513946.1;locus_tag=NM058_19640;product=cortex morphogenetic protein CmpA;protein_id=UTX05015.1;transl_table=11 CP101611.1 Genbank gene 3815228 3817387 . - . ID=gene-NM058_19645;Name=NM058_19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19645 CP101611.1 Protein Homology CDS 3815228 3817387 . - 0 ID=cds-UTX05016.1;Parent=gene-NM058_19645;Dbxref=NCBI_GP:UTX05016.1;Name=UTX05016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388359.2;locus_tag=NM058_19645;product=RNA-binding transcriptional accessory protein;protein_id=UTX05016.1;transl_table=11 CP101611.1 Genbank gene 3817593 3818192 . - . ID=gene-NM058_19650;Name=rsbX;gbkey=Gene;gene=rsbX;gene_biotype=protein_coding;locus_tag=NM058_19650 CP101611.1 Protein Homology CDS 3817593 3818192 . - 0 ID=cds-UTX05017.1;Parent=gene-NM058_19650;Dbxref=NCBI_GP:UTX05017.1;Name=UTX05017.1;gbkey=CDS;gene=rsbX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388355.1;locus_tag=NM058_19650;product=phosphoserine phosphatase RsbX;protein_id=UTX05017.1;transl_table=11 CP101611.1 Genbank gene 3818192 3818980 . - . ID=gene-NM058_19655;Name=sigB;gbkey=Gene;gene=sigB;gene_biotype=protein_coding;locus_tag=NM058_19655 CP101611.1 Protein Homology CDS 3818192 3818980 . - 0 ID=cds-UTX05018.1;Parent=gene-NM058_19655;Dbxref=NCBI_GP:UTX05018.1;Name=UTX05018.1;Ontology_term=GO:0006352,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=sigB;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388354.2;locus_tag=NM058_19655;product=RNA polymerase sigma factor SigB;protein_id=UTX05018.1;transl_table=11 CP101611.1 Genbank gene 3818946 3819428 . - . ID=gene-NM058_19660;Name=rsbW;gbkey=Gene;gene=rsbW;gene_biotype=protein_coding;locus_tag=NM058_19660 CP101611.1 Protein Homology CDS 3818946 3819428 . - 0 ID=cds-UTX05019.1;Parent=gene-NM058_19660;Dbxref=NCBI_GP:UTX05019.1;Name=UTX05019.1;gbkey=CDS;gene=rsbW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388353.1;locus_tag=NM058_19660;product=anti-sigma B factor RsbW;protein_id=UTX05019.1;transl_table=11 CP101611.1 Genbank gene 3819425 3819754 . - . ID=gene-NM058_19665;Name=rsbV;gbkey=Gene;gene=rsbV;gene_biotype=protein_coding;locus_tag=NM058_19665 CP101611.1 Protein Homology CDS 3819425 3819754 . - 0 ID=cds-UTX05020.1;Parent=gene-NM058_19665;Dbxref=NCBI_GP:UTX05020.1;Name=UTX05020.1;Ontology_term=GO:0043856;gbkey=CDS;gene=rsbV;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388352.1;locus_tag=NM058_19665;product=anti-sigma factor antagonist RsbV;protein_id=UTX05020.1;transl_table=11 CP101611.1 Genbank gene 3819816 3820823 . - . ID=gene-NM058_19670;Name=rsbU;gbkey=Gene;gene=rsbU;gene_biotype=protein_coding;locus_tag=NM058_19670 CP101611.1 Protein Homology CDS 3819816 3820823 . - 0 ID=cds-UTX05021.1;Parent=gene-NM058_19670;Dbxref=NCBI_GP:UTX05021.1;Name=UTX05021.1;gbkey=CDS;gene=rsbU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388351.1;locus_tag=NM058_19670;product=phosphoserine phosphatase RsbU;protein_id=UTX05021.1;transl_table=11 CP101611.1 Genbank gene 3820835 3821236 . - . ID=gene-NM058_19675;Name=rsbT;gbkey=Gene;gene=rsbT;gene_biotype=protein_coding;locus_tag=NM058_19675 CP101611.1 Protein Homology CDS 3820835 3821236 . - 0 ID=cds-UTX05022.1;Parent=gene-NM058_19675;Dbxref=NCBI_GP:UTX05022.1;Name=UTX05022.1;gbkey=CDS;gene=rsbT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388350.1;locus_tag=NM058_19675;product=serine/threonine-protein kinase RsbT;protein_id=UTX05022.1;transl_table=11 CP101611.1 Genbank gene 3821240 3821605 . - . ID=gene-NM058_19680;Name=rsbS;gbkey=Gene;gene=rsbS;gene_biotype=protein_coding;locus_tag=NM058_19680 CP101611.1 Protein Homology CDS 3821240 3821605 . - 0 ID=cds-UTX05023.1;Parent=gene-NM058_19680;Dbxref=NCBI_GP:UTX05023.1;Name=UTX05023.1;gbkey=CDS;gene=rsbS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388349.1;locus_tag=NM058_19680;product=RsbT antagonist protein RsbS;protein_id=UTX05023.1;transl_table=11 CP101611.1 Genbank gene 3821610 3822434 . - . ID=gene-NM058_19685;Name=rsbRA;gbkey=Gene;gene=rsbRA;gene_biotype=protein_coding;locus_tag=NM058_19685 CP101611.1 Protein Homology CDS 3821610 3822434 . - 0 ID=cds-UTX05024.1;Parent=gene-NM058_19685;Dbxref=NCBI_GP:UTX05024.1;Name=UTX05024.1;gbkey=CDS;gene=rsbRA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388348.1;locus_tag=NM058_19685;product=RsbT co-antagonist protein RsbRA;protein_id=UTX05024.1;transl_table=11 CP101611.1 Genbank gene 3822549 3822899 . - . ID=gene-NM058_19690;Name=ndoA;gbkey=Gene;gene=ndoA;gene_biotype=protein_coding;locus_tag=NM058_19690 CP101611.1 Protein Homology CDS 3822549 3822899 . - 0 ID=cds-UTX05025.1;Parent=gene-NM058_19690;Dbxref=NCBI_GP:UTX05025.1;Name=UTX05025.1;gbkey=CDS;gene=ndoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388347.1;locus_tag=NM058_19690;product=type II toxin-antitoxin system endoribonuclease NdoA;protein_id=UTX05025.1;transl_table=11 CP101611.1 Genbank gene 3822904 3823185 . - . ID=gene-NM058_19695;Name=endB;gbkey=Gene;gene=endB;gene_biotype=protein_coding;locus_tag=NM058_19695 CP101611.1 Protein Homology CDS 3822904 3823185 . - 0 ID=cds-UTX05026.1;Parent=gene-NM058_19695;Dbxref=NCBI_GP:UTX05026.1;Name=UTX05026.1;gbkey=CDS;gene=endB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388346.1;locus_tag=NM058_19695;product=type II toxin-antitoxin system antitoxin EndoAI;protein_id=UTX05026.1;transl_table=11 CP101611.1 Genbank gene 3823300 3824469 . - . ID=gene-NM058_19700;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=NM058_19700 CP101611.1 Protein Homology CDS 3823300 3824469 . - 0 ID=cds-UTX05027.1;Parent=gene-NM058_19700;Dbxref=NCBI_GP:UTX05027.1;Name=UTX05027.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015239196.1;locus_tag=NM058_19700;product=alanine racemase;protein_id=UTX05027.1;transl_table=11 CP101611.1 Genbank pseudogene 3824584 3825599 . - . ID=gene-NM058_19705;Name=NM058_19705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19705;pseudo=true CP101611.1 Protein Homology CDS 3824584 3825599 . - 0 ID=cds-NM058_19705;Parent=gene-NM058_19705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388344.2;locus_tag=NM058_19705;product=outer membrane lipoprotein carrier protein LolA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3825764 3826129 . - . ID=gene-NM058_19710;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=NM058_19710 CP101611.1 Protein Homology CDS 3825764 3826129 . - 0 ID=cds-UTX05028.1;Parent=gene-NM058_19710;Dbxref=NCBI_GP:UTX05028.1;Name=UTX05028.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388343.1;locus_tag=NM058_19710;product=holo-ACP synthase;protein_id=UTX05028.1;transl_table=11 CP101611.1 Genbank gene 3826224 3826859 . + . ID=gene-NM058_19715;Name=NM058_19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19715 CP101611.1 Protein Homology CDS 3826224 3826859 . + 0 ID=cds-UTX05029.1;Parent=gene-NM058_19715;Dbxref=NCBI_GP:UTX05029.1;Name=UTX05029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006638775.1;locus_tag=NM058_19715;product=rhomboid family intramembrane serine protease;protein_id=UTX05029.1;transl_table=11 CP101611.1 Genbank pseudogene 3826819 3828299 . - . ID=gene-NM058_19720;Name=NM058_19720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19720;pseudo=true CP101611.1 Protein Homology CDS 3826819 3828299 . - 0 ID=cds-NM058_19720;Parent=gene-NM058_19720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388341.1;locus_tag=NM058_19720;product=PH domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3828289 3828744 . - . ID=gene-NM058_19725;Name=NM058_19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19725 CP101611.1 Protein Homology CDS 3828289 3828744 . - 0 ID=cds-UTX07105.1;Parent=gene-NM058_19725;Dbxref=NCBI_GP:UTX07105.1;Name=UTX07105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015388678.1;locus_tag=NM058_19725;product=PH domain-containing protein;protein_id=UTX07105.1;transl_table=11 CP101611.1 Genbank gene 3828938 3830422 . - . ID=gene-NM058_19730;Name=cshA;gbkey=Gene;gene=cshA;gene_biotype=protein_coding;locus_tag=NM058_19730 CP101611.1 Protein Homology CDS 3828938 3830422 . - 0 ID=cds-UTX05030.1;Parent=gene-NM058_19730;Dbxref=NCBI_GP:UTX05030.1;Name=UTX05030.1;gbkey=CDS;gene=cshA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388339.2;locus_tag=NM058_19730;product=ATP-dependent RNA helicase CshA;protein_id=UTX05030.1;transl_table=11 CP101611.1 Genbank pseudogene 3830821 3832193 . - . ID=gene-NM058_19735;Name=NM058_19735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19735;pseudo=true CP101611.1 Protein Homology CDS 3830821 3832193 . - 0 ID=cds-NM058_19735;Parent=gene-NM058_19735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388338.1;locus_tag=NM058_19735;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3832264 3833349 . - . ID=gene-NM058_19740;Name=NM058_19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19740 CP101611.1 Protein Homology CDS 3832264 3833349 . - 0 ID=cds-UTX05031.1;Parent=gene-NM058_19740;Dbxref=NCBI_GP:UTX05031.1;Name=UTX05031.1;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003179106.1;locus_tag=NM058_19740;product=D-alanine--D-alanine ligase;protein_id=UTX05031.1;transl_table=11 CP101611.1 Genbank gene 3833504 3833824 . + . ID=gene-NM058_19745;Name=NM058_19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19745 CP101611.1 Protein Homology CDS 3833504 3833824 . + 0 ID=cds-UTX05032.1;Parent=gene-NM058_19745;Dbxref=NCBI_GP:UTX05032.1;Name=UTX05032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388336.1;locus_tag=NM058_19745;product=thioredoxin family protein;protein_id=UTX05032.1;transl_table=11 CP101611.1 Genbank pseudogene 3833839 3834709 . - . ID=gene-NM058_19750;Name=NM058_19750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19750;pseudo=true CP101611.1 Protein Homology CDS 3833839 3834709 . - 0 ID=cds-NM058_19750;Parent=gene-NM058_19750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388335.1;locus_tag=NM058_19750;product=cation diffusion facilitator family transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3834959 3835123 . + . ID=gene-NM058_19755;Name=NM058_19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19755 CP101611.1 Protein Homology CDS 3834959 3835123 . + 0 ID=cds-UTX05033.1;Parent=gene-NM058_19755;Dbxref=NCBI_GP:UTX05033.1;Name=UTX05033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513944.1;locus_tag=NM058_19755;product=Fur-regulated basic protein FbpA;protein_id=UTX05033.1;transl_table=11 CP101611.1 Genbank gene 3835077 3835256 . + . ID=gene-NM058_19760;Name=fbpB;gbkey=Gene;gene=fbpB;gene_biotype=protein_coding;locus_tag=NM058_19760 CP101611.1 Protein Homology CDS 3835077 3835256 . + 0 ID=cds-UTX05034.1;Parent=gene-NM058_19760;Dbxref=NCBI_GP:UTX05034.1;Name=UTX05034.1;gbkey=CDS;gene=fbpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388334.1;locus_tag=NM058_19760;product=Fur-regulated basic protein FbpB;protein_id=UTX05034.1;transl_table=11 CP101611.1 Genbank gene 3835280 3836425 . - . ID=gene-NM058_19765;Name=NM058_19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19765 CP101611.1 Protein Homology CDS 3835280 3836425 . - 0 ID=cds-UTX05035.1;Parent=gene-NM058_19765;Dbxref=NCBI_GP:UTX05035.1;Name=UTX05035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388333.1;locus_tag=NM058_19765;product=acyl-CoA/acyl-ACP dehydrogenase;protein_id=UTX05035.1;transl_table=11 CP101611.1 Genbank gene 3836550 3836885 . - . ID=gene-NM058_19770;Name=NM058_19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19770 CP101611.1 Protein Homology CDS 3836550 3836885 . - 0 ID=cds-UTX05036.1;Parent=gene-NM058_19770;Dbxref=NCBI_GP:UTX05036.1;Name=UTX05036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388332.1;locus_tag=NM058_19770;product=hypothetical protein;protein_id=UTX05036.1;transl_table=11 CP101611.1 Genbank pseudogene 3836980 3837719 . - . ID=gene-NM058_19775;Name=NM058_19775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19775;pseudo=true CP101611.1 Protein Homology CDS 3836980 3837719 . - 0 ID=cds-NM058_19775;Parent=gene-NM058_19775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388331.1;locus_tag=NM058_19775;product=ABC transporter permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3837739 3838665 . - . ID=gene-NM058_19780;Name=NM058_19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19780 CP101611.1 Protein Homology CDS 3837739 3838665 . - 0 ID=cds-UTX05037.1;Parent=gene-NM058_19780;Dbxref=NCBI_GP:UTX05037.1;Name=UTX05037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388330.1;locus_tag=NM058_19780;product=ABC transporter ATP-binding protein;protein_id=UTX05037.1;transl_table=11 CP101611.1 Genbank pseudogene 3838756 3839992 . - . ID=gene-NM058_19785;Name=NM058_19785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19785;pseudo=true CP101611.1 Protein Homology CDS 3838756 3839992 . - 0 ID=cds-NM058_19785;Parent=gene-NM058_19785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240318.1;locus_tag=NM058_19785;product=dicarboxylate/amino acid:cation symporter;pseudo=true;transl_table=11 CP101611.1 cmsearch riboswitch 3840066 3840196 . - . ID=id-CP101611.1:3840066..3840196;Dbxref=RFAM:RF00379;Note=cyclic di-AMP (ydaO/yuaA leader) riboswitch senses the signaling molecule cyclic di-AMP;bound_moiety=cyclic di-AMP;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank gene 3840244 3841296 . - . ID=gene-NM058_19790;Name=NM058_19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19790 CP101611.1 Protein Homology CDS 3840244 3841296 . - 0 ID=cds-UTX05038.1;Parent=gene-NM058_19790;Dbxref=NCBI_GP:UTX05038.1;Name=UTX05038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388329.1;locus_tag=NM058_19790;product=AI-2E family transporter;protein_id=UTX05038.1;transl_table=11 CP101611.1 Genbank pseudogene 3841442 3842706 . - . ID=gene-NM058_19795;Name=dctP;gbkey=Gene;gene=dctP;gene_biotype=pseudogene;locus_tag=NM058_19795;pseudo=true CP101611.1 Protein Homology CDS 3841442 3842706 . - 0 ID=cds-NM058_19795;Parent=gene-NM058_19795;Note=frameshifted;gbkey=CDS;gene=dctP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388328.1;locus_tag=NM058_19795;product=C4-dicarboxylate transporter DctP;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3842826 3843506 . - . ID=gene-NM058_19800;Name=dctR;gbkey=Gene;gene=dctR;gene_biotype=protein_coding;locus_tag=NM058_19800 CP101611.1 Protein Homology CDS 3842826 3843506 . - 0 ID=cds-UTX05039.1;Parent=gene-NM058_19800;Dbxref=NCBI_GP:UTX05039.1;Name=UTX05039.1;gbkey=CDS;gene=dctR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388327.1;locus_tag=NM058_19800;product=two-component system response regulator DctR;protein_id=UTX05039.1;transl_table=11 CP101611.1 Genbank pseudogene 3843496 3845102 . - . ID=gene-NM058_19805;Name=dctS;gbkey=Gene;gene=dctS;gene_biotype=pseudogene;locus_tag=NM058_19805;pseudo=true CP101611.1 Protein Homology CDS 3843496 3845102 . - 0 ID=cds-NM058_19805;Parent=gene-NM058_19805;Note=frameshifted;gbkey=CDS;gene=dctS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388326.1;locus_tag=NM058_19805;product=two-component system sensor histidine kinase DctS;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3845172 3846230 . + . ID=gene-NM058_19810;Name=NM058_19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19810 CP101611.1 Protein Homology CDS 3845172 3846230 . + 0 ID=cds-UTX05040.1;Parent=gene-NM058_19810;Dbxref=NCBI_GP:UTX05040.1;Name=UTX05040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240312.1;locus_tag=NM058_19810;product=TRAP transporter substrate-binding protein;protein_id=UTX05040.1;transl_table=11 CP101611.1 Genbank pseudogene 3846316 3847138 . + . ID=gene-NM058_19815;Name=NM058_19815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19815;pseudo=true CP101611.1 Protein Homology CDS 3846316 3847138 . + 0 ID=cds-NM058_19815;Parent=gene-NM058_19815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388324.1;locus_tag=NM058_19815;product=manganese catalase family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3847175 3847534 . - . ID=gene-NM058_19820;Name=NM058_19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19820 CP101611.1 Protein Homology CDS 3847175 3847534 . - 0 ID=cds-UTX05041.1;Parent=gene-NM058_19820;Dbxref=NCBI_GP:UTX05041.1;Name=UTX05041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388323.1;locus_tag=NM058_19820;product=YdbC family protein;protein_id=UTX05041.1;transl_table=11 CP101611.1 Genbank gene 3847528 3847869 . - . ID=gene-NM058_19825;Name=NM058_19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19825 CP101611.1 Protein Homology CDS 3847528 3847869 . - 0 ID=cds-UTX05042.1;Parent=gene-NM058_19825;Dbxref=NCBI_GP:UTX05042.1;Name=UTX05042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388322.1;locus_tag=NM058_19825;product=cupin domain-containing protein;protein_id=UTX05042.1;transl_table=11 CP101611.1 Genbank gene 3848002 3848373 . - . ID=gene-NM058_19830;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=NM058_19830 CP101611.1 Protein Homology CDS 3848002 3848373 . - 0 ID=cds-UTX05043.1;Parent=gene-NM058_19830;Dbxref=NCBI_GP:UTX05043.1;Name=UTX05043.1;gbkey=CDS;gene=gsiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388321.1;locus_tag=NM058_19830;product=glucose starvation-inducible protein GsiB;protein_id=UTX05043.1;transl_table=11 CP101611.1 Genbank pseudogene 3848502 3849319 . - . ID=gene-NM058_19835;Name=NM058_19835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19835;pseudo=true CP101611.1 Protein Homology CDS 3848502 3849319 . - 0 ID=cds-NM058_19835;Parent=gene-NM058_19835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388320.1;locus_tag=NM058_19835;product=EcsC family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3849436 3849888 . + . ID=gene-NM058_19840;Name=NM058_19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19840 CP101611.1 Protein Homology CDS 3849436 3849888 . + 0 ID=cds-UTX05044.1;Parent=gene-NM058_19840;Dbxref=NCBI_GP:UTX05044.1;Name=UTX05044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388319.1;locus_tag=NM058_19840;product=DUF2188 domain-containing protein;protein_id=UTX05044.1;transl_table=11 CP101611.1 Genbank gene 3849966 3850223 . + . ID=gene-NM058_19845;Name=NM058_19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19845 CP101611.1 Protein Homology CDS 3849966 3850223 . + 0 ID=cds-UTX07106.1;Parent=gene-NM058_19845;Dbxref=NCBI_GP:UTX07106.1;Name=UTX07106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388318.1;locus_tag=NM058_19845;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=UTX07106.1;transl_table=11 CP101611.1 Genbank pseudogene 3850452 3851728 . + . ID=gene-NM058_19850;Name=NM058_19850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19850;pseudo=true CP101611.1 Protein Homology CDS 3850452 3851728 . + 0 ID=cds-NM058_19850;Parent=gene-NM058_19850;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388317.1;locus_tag=NM058_19850;product=Nramp family divalent metal transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3851831 3852097 . + . ID=gene-NM058_19855;Name=NM058_19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19855 CP101611.1 Protein Homology CDS 3851831 3852097 . + 0 ID=cds-UTX07107.1;Parent=gene-NM058_19855;Dbxref=NCBI_GP:UTX07107.1;Name=UTX07107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097680.1;locus_tag=NM058_19855;product=hypothetical protein;protein_id=UTX07107.1;transl_table=11 CP101611.1 Genbank pseudogene 3852393 3854118 . - . ID=gene-NM058_19860;Name=NM058_19860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19860;pseudo=true CP101611.1 Protein Homology CDS 3852393 3854118 . - 0 ID=cds-NM058_19860;Parent=gene-NM058_19860;Note=frameshifted;Ontology_term=GO:0000287,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388315.1;locus_tag=NM058_19860;product=pyruvate oxidase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3854185 3854634 . - . ID=gene-NM058_19865;Name=NM058_19865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19865;pseudo=true CP101611.1 Protein Homology CDS 3854185 3854634 . - 0 ID=cds-NM058_19865;Parent=gene-NM058_19865;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388314.1;locus_tag=NM058_19865;product=NUDIX hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3854694 3856516 . - . ID=gene-NM058_19870;Name=kimA;gbkey=Gene;gene=kimA;gene_biotype=pseudogene;gene_synonym=ydaO;locus_tag=NM058_19870;pseudo=true CP101611.1 Protein Homology CDS 3854694 3856516 . - 0 ID=cds-NM058_19870;Parent=gene-NM058_19870;Note=frameshifted;gbkey=CDS;gene=kimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388313.1;locus_tag=NM058_19870;product=potassium transporter KimA;pseudo=true;transl_table=11 CP101611.1 cmsearch riboswitch 3856711 3856855 . - . ID=id-CP101611.1:3856711..3856855;Dbxref=RFAM:RF00379;Note=cyclic di-AMP (ydaO/yuaA leader) riboswitch senses the signaling molecule cyclic di-AMP;bound_moiety=cyclic di-AMP;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP101611.1 Genbank pseudogene 3856990 3859098 . - . ID=gene-NM058_19875;Name=NM058_19875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19875;pseudo=true CP101611.1 Protein Homology CDS 3856990 3859098 . - 0 ID=cds-NM058_19875;Parent=gene-NM058_19875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388312.1;locus_tag=NM058_19875;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3859104 3860366 . - . ID=gene-NM058_19880;Name=NM058_19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19880 CP101611.1 Protein Homology CDS 3859104 3860366 . - 0 ID=cds-UTX05045.1;Parent=gene-NM058_19880;Dbxref=NCBI_GP:UTX05045.1;Name=UTX05045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388311.1;locus_tag=NM058_19880;product=glycosyltransferase family 2 protein;protein_id=UTX05045.1;transl_table=11 CP101611.1 Genbank gene 3860359 3862068 . - . ID=gene-NM058_19885;Name=NM058_19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19885 CP101611.1 Protein Homology CDS 3860359 3862068 . - 0 ID=cds-UTX07108.1;Parent=gene-NM058_19885;Dbxref=NCBI_GP:UTX07108.1;Name=UTX07108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388310.1;locus_tag=NM058_19885;product=DUF2334 domain-containing protein;protein_id=UTX07108.1;transl_table=11 CP101611.1 Genbank gene 3862079 3862930 . - . ID=gene-NM058_19890;Name=NM058_19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19890 CP101611.1 Protein Homology CDS 3862079 3862930 . - 0 ID=cds-UTX05046.1;Parent=gene-NM058_19890;Dbxref=NCBI_GP:UTX05046.1;Name=UTX05046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388309.1;locus_tag=NM058_19890;product=diguanylate cyclase;protein_id=UTX05046.1;transl_table=11 CP101611.1 Genbank gene 3862911 3863999 . - . ID=gene-NM058_19895;Name=NM058_19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19895 CP101611.1 Protein Homology CDS 3862911 3863999 . - 0 ID=cds-UTX05047.1;Parent=gene-NM058_19895;Dbxref=NCBI_GP:UTX05047.1;Name=UTX05047.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388308.1;locus_tag=NM058_19895;product=glycosyl hydrolase family 8;protein_id=UTX05047.1;transl_table=11 CP101611.1 Genbank gene 3864195 3866378 . - . ID=gene-NM058_19900;Name=NM058_19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19900 CP101611.1 Protein Homology CDS 3864195 3866378 . - 0 ID=cds-UTX05048.1;Parent=gene-NM058_19900;Dbxref=NCBI_GP:UTX05048.1;Name=UTX05048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388307.1;locus_tag=NM058_19900;product=DNA topoisomerase III;protein_id=UTX05048.1;transl_table=11 CP101611.1 Genbank gene 3866443 3866877 . - . ID=gene-NM058_19905;Name=lrpC;gbkey=Gene;gene=lrpC;gene_biotype=protein_coding;locus_tag=NM058_19905 CP101611.1 Protein Homology CDS 3866443 3866877 . - 0 ID=cds-UTX05049.1;Parent=gene-NM058_19905;Dbxref=NCBI_GP:UTX05049.1;Name=UTX05049.1;gbkey=CDS;gene=lrpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003225096.1;locus_tag=NM058_19905;product=transcriptional regulator LrpC;protein_id=UTX05049.1;transl_table=11 CP101611.1 Genbank gene 3867062 3867352 . + . ID=gene-NM058_19910;Name=NM058_19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19910 CP101611.1 Protein Homology CDS 3867062 3867352 . + 0 ID=cds-UTX05050.1;Parent=gene-NM058_19910;Dbxref=NCBI_GP:UTX05050.1;Name=UTX05050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388305.1;locus_tag=NM058_19910;product=DUF3817 domain-containing protein;protein_id=UTX05050.1;transl_table=11 CP101611.1 Genbank gene 3867397 3868206 . - . ID=gene-NM058_19915;Name=amj;gbkey=Gene;gene=amj;gene_biotype=protein_coding;locus_tag=NM058_19915 CP101611.1 Protein Homology CDS 3867397 3868206 . - 0 ID=cds-UTX05051.1;Parent=gene-NM058_19915;Dbxref=NCBI_GP:UTX05051.1;Name=UTX05051.1;gbkey=CDS;gene=amj;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388304.1;locus_tag=NM058_19915;product=lipid II flippase Amj;protein_id=UTX05051.1;transl_table=11 CP101611.1 Genbank gene 3868710 3869132 . - . ID=gene-NM058_19920;Name=NM058_19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19920 CP101611.1 Protein Homology CDS 3868710 3869132 . - 0 ID=cds-UTX05052.1;Parent=gene-NM058_19920;Dbxref=NCBI_GP:UTX05052.1;Name=UTX05052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388303.1;locus_tag=NM058_19920;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=UTX05052.1;transl_table=11 CP101611.1 Genbank gene 3869218 3869763 . - . ID=gene-NM058_19925;Name=NM058_19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19925 CP101611.1 Protein Homology CDS 3869218 3869763 . - 0 ID=cds-UTX05053.1;Parent=gene-NM058_19925;Dbxref=NCBI_GP:UTX05053.1;Name=UTX05053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014662814.1;locus_tag=NM058_19925;product=GNAT family N-acetyltransferase;protein_id=UTX05053.1;transl_table=11 CP101611.1 Genbank pseudogene 3869851 3870353 . - . ID=gene-NM058_19930;Name=lyxE;gbkey=Gene;gene=lyxE;gene_biotype=pseudogene;locus_tag=NM058_19930;pseudo=true CP101611.1 Protein Homology CDS 3869851 3870353 . - 0 ID=cds-NM058_19930;Parent=gene-NM058_19930;Note=frameshifted;gbkey=CDS;gene=lyxE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388301.1;locus_tag=NM058_19930;product=D-lyxose ketol-isomerase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3870369 3871229 . - . ID=gene-NM058_19935;Name=NM058_19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19935 CP101611.1 Protein Homology CDS 3870369 3871229 . - 0 ID=cds-UTX05054.1;Parent=gene-NM058_19935;Dbxref=NCBI_GP:UTX05054.1;Name=UTX05054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388300.1;locus_tag=NM058_19935;product=SDR family oxidoreductase;protein_id=UTX05054.1;transl_table=11 CP101611.1 Genbank gene 3871380 3871976 . + . ID=gene-NM058_19940;Name=NM058_19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19940 CP101611.1 Protein Homology CDS 3871380 3871976 . + 0 ID=cds-UTX05055.1;Parent=gene-NM058_19940;Dbxref=NCBI_GP:UTX05055.1;Name=UTX05055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003225080.1;locus_tag=NM058_19940;product=class I SAM-dependent methyltransferase;protein_id=UTX05055.1;transl_table=11 CP101611.1 Genbank pseudogene 3871994 3873504 . - . ID=gene-NM058_19945;Name=NM058_19945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_19945;pseudo=true CP101611.1 Protein Homology CDS 3871994 3873504 . - 0 ID=cds-NM058_19945;Parent=gene-NM058_19945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388298.2;locus_tag=NM058_19945;product=acyl--CoA ligase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3873716 3875799 . - . ID=gene-NM058_19950;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=pseudogene;locus_tag=NM058_19950;pseudo=true CP101611.1 Protein Homology CDS 3873716 3875799 . - 0 ID=cds-NM058_19950;Parent=gene-NM058_19950;Note=frameshifted;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010333061.1;locus_tag=NM058_19950;product=mannitol operon transcriptional activator MtlR;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3875988 3876890 . - . ID=gene-NM058_19955;Name=NM058_19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19955 CP101611.1 Protein Homology CDS 3875988 3876890 . - 0 ID=cds-UTX05056.1;Parent=gene-NM058_19955;Dbxref=NCBI_GP:UTX05056.1;Name=UTX05056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388296.1;locus_tag=NM058_19955;product=aldo/keto reductase family oxidoreductase;protein_id=UTX05056.1;transl_table=11 CP101611.1 Genbank pseudogene 3876991 3878998 . - . ID=gene-NM058_19960;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=pseudogene;locus_tag=NM058_19960;pseudo=true CP101611.1 Protein Homology CDS 3876991 3878998 . - 0 ID=cds-NM058_19960;Parent=gene-NM058_19960;Note=frameshifted;gbkey=CDS;gene=pbpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388295.1;locus_tag=NM058_19960;product=penicillin-binding protein 3;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3879150 3879437 . + . ID=gene-NM058_19965;Name=NM058_19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19965 CP101611.1 Protein Homology CDS 3879150 3879437 . + 0 ID=cds-UTX05057.1;Parent=gene-NM058_19965;Dbxref=NCBI_GP:UTX05057.1;Name=UTX05057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388294.1;locus_tag=NM058_19965;product=antibiotic biosynthesis monooxygenase;protein_id=UTX05057.1;transl_table=11 CP101611.1 Genbank gene 3879443 3879688 . - . ID=gene-NM058_19970;Name=NM058_19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19970 CP101611.1 Protein Homology CDS 3879443 3879688 . - 0 ID=cds-UTX05058.1;Parent=gene-NM058_19970;Dbxref=NCBI_GP:UTX05058.1;Name=UTX05058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388293.1;locus_tag=NM058_19970;product=YczI family protein;protein_id=UTX05058.1;transl_table=11 CP101611.1 Genbank gene 3879862 3880503 . - . ID=gene-NM058_19975;Name=NM058_19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19975 CP101611.1 Protein Homology CDS 3879862 3880503 . - 0 ID=cds-UTX05059.1;Parent=gene-NM058_19975;Dbxref=NCBI_GP:UTX05059.1;Name=UTX05059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388292.1;locus_tag=NM058_19975;product=SGNH/GDSL hydrolase family protein;protein_id=UTX05059.1;transl_table=11 CP101611.1 Genbank gene 3880567 3881319 . - . ID=gene-NM058_19980;Name=NM058_19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19980 CP101611.1 Protein Homology CDS 3880567 3881319 . - 0 ID=cds-UTX07109.1;Parent=gene-NM058_19980;Dbxref=NCBI_GP:UTX07109.1;Name=UTX07109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388291.2;locus_tag=NM058_19980;product=IclR family transcriptional regulator;protein_id=UTX07109.1;transl_table=11 CP101611.1 Genbank gene 3881335 3882342 . - . ID=gene-NM058_19985;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=NM058_19985 CP101611.1 Protein Homology CDS 3881335 3882342 . - 0 ID=cds-UTX07110.1;Parent=gene-NM058_19985;Dbxref=NCBI_GP:UTX07110.1;Name=UTX07110.1;gbkey=CDS;gene=pxpC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_054571.2;locus_tag=NM058_19985;product=5-oxoprolinase subunit PxpC;protein_id=UTX07110.1;transl_table=11 CP101611.1 Genbank gene 3882345 3883067 . - . ID=gene-NM058_19990;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=NM058_19990 CP101611.1 Protein Homology CDS 3882345 3883067 . - 0 ID=cds-UTX05060.1;Parent=gene-NM058_19990;Dbxref=NCBI_GP:UTX05060.1;Name=UTX05060.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388290.2;locus_tag=NM058_19990;product=5-oxoprolinase subunit B;protein_id=UTX05060.1;transl_table=11 CP101611.1 Genbank gene 3883112 3883885 . - . ID=gene-NM058_19995;Name=NM058_19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_19995 CP101611.1 Protein Homology CDS 3883112 3883885 . - 0 ID=cds-UTX07111.1;Parent=gene-NM058_19995;Dbxref=NCBI_GP:UTX07111.1;Name=UTX07111.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388289.3;locus_tag=NM058_19995;product=putative hydro-lyase;protein_id=UTX07111.1;transl_table=11 CP101611.1 Genbank pseudogene 3883909 3885068 . - . ID=gene-NM058_20000;Name=NM058_20000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20000;pseudo=true CP101611.1 Protein Homology CDS 3883909 3885068 . - 0 ID=cds-NM058_20000;Parent=gene-NM058_20000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007498097.1;locus_tag=NM058_20000;product=divalent metal cation transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3885142 3885909 . - . ID=gene-NM058_20005;Name=NM058_20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20005 CP101611.1 Protein Homology CDS 3885142 3885909 . - 0 ID=cds-UTX05061.1;Parent=gene-NM058_20005;Dbxref=NCBI_GP:UTX05061.1;Name=UTX05061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240244.1;locus_tag=NM058_20005;product=LamB/YcsF family protein;protein_id=UTX05061.1;transl_table=11 CP101611.1 Genbank gene 3886113 3886862 . - . ID=gene-NM058_20010;Name=NM058_20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20010 CP101611.1 Protein Homology CDS 3886113 3886862 . - 0 ID=cds-UTX05062.1;Parent=gene-NM058_20010;Dbxref=NCBI_GP:UTX05062.1;Name=UTX05062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388286.2;locus_tag=NM058_20010;product=Cof-type HAD-IIB family hydrolase;protein_id=UTX05062.1;transl_table=11 CP101611.1 Genbank gene 3886995 3887159 . + . ID=gene-NM058_20015;Name=NM058_20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20015 CP101611.1 Protein Homology CDS 3886995 3887159 . + 0 ID=cds-UTX05063.1;Parent=gene-NM058_20015;Dbxref=NCBI_GP:UTX05063.1;Name=UTX05063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097679.1;locus_tag=NM058_20015;product=hypothetical protein;protein_id=UTX05063.1;transl_table=11 CP101611.1 Genbank gene 3887195 3887587 . - . ID=gene-NM058_20020;Name=NM058_20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20020 CP101611.1 Protein Homology CDS 3887195 3887587 . - 0 ID=cds-UTX05064.1;Parent=gene-NM058_20020;Dbxref=NCBI_GP:UTX05064.1;Name=UTX05064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388285.2;locus_tag=NM058_20020;product=beta-hydroxyacyl-ACP dehydratase;protein_id=UTX05064.1;transl_table=11 CP101611.1 Genbank gene 3887672 3888268 . + . ID=gene-NM058_20025;Name=NM058_20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20025 CP101611.1 Protein Homology CDS 3887672 3888268 . + 0 ID=cds-UTX05065.1;Parent=gene-NM058_20025;Dbxref=NCBI_GP:UTX05065.1;Name=UTX05065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240236.1;locus_tag=NM058_20025;product=dienelactone hydrolase family protein;protein_id=UTX05065.1;transl_table=11 CP101611.1 Genbank gene 3888263 3889330 . - . ID=gene-NM058_20030;Name=NM058_20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20030 CP101611.1 Protein Homology CDS 3888263 3889330 . - 0 ID=cds-UTX05066.1;Parent=gene-NM058_20030;Dbxref=NCBI_GP:UTX05066.1;Name=UTX05066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388282.3;locus_tag=NM058_20030;product=tartrate dehydrogenase;protein_id=UTX05066.1;transl_table=11 CP101611.1 Genbank pseudogene 3889418 3890537 . - . ID=gene-NM058_20035;Name=NM058_20035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20035;pseudo=true CP101611.1 Protein Homology CDS 3889418 3890537 . - 0 ID=cds-NM058_20035;Parent=gene-NM058_20035;Note=frameshifted;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388281.2;locus_tag=NM058_20035;product=mannitol-1-phosphate 5-dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3890539 3890970 . - . ID=gene-NM058_20040;Name=NM058_20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20040 CP101611.1 Protein Homology CDS 3890539 3890970 . - 0 ID=cds-UTX05067.1;Parent=gene-NM058_20040;Dbxref=NCBI_GP:UTX05067.1;Name=UTX05067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097678.1;locus_tag=NM058_20040;product=PTS sugar transporter subunit IIA;protein_id=UTX05067.1;transl_table=11 CP101611.1 Genbank pseudogene 3890995 3892427 . - . ID=gene-NM058_20045;Name=NM058_20045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20045;pseudo=true CP101611.1 Protein Homology CDS 3890995 3892427 . - 0 ID=cds-NM058_20045;Parent=gene-NM058_20045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010330818.1;locus_tag=NM058_20045;product=PTS mannitol transporter subunit IICB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3892601 3892954 . - . ID=gene-NM058_20050;Name=NM058_20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20050 CP101611.1 Protein Homology CDS 3892601 3892954 . - 0 ID=cds-UTX05068.1;Parent=gene-NM058_20050;Dbxref=NCBI_GP:UTX05068.1;Name=UTX05068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388279.1;locus_tag=NM058_20050;product=hypothetical protein;protein_id=UTX05068.1;transl_table=11 CP101611.1 Genbank pseudogene 3893119 3893690 . + . ID=gene-NM058_20055;Name=ycnK;gbkey=Gene;gene=ycnK;gene_biotype=pseudogene;locus_tag=NM058_20055;pseudo=true CP101611.1 Protein Homology CDS 3893119 3893690 . + 0 ID=cds-NM058_20055;Parent=gene-NM058_20055;Note=frameshifted;gbkey=CDS;gene=ycnK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017419264.1;locus_tag=NM058_20055;product=copper uptake transcriptional regulator YcnK;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3893725 3895346 . + . ID=gene-NM058_20060;Name=NM058_20060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20060;pseudo=true CP101611.1 Protein Homology CDS 3893725 3895346 . + 0 ID=cds-NM058_20060;Parent=gene-NM058_20060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388277.2;locus_tag=NM058_20060;product=copper resistance CopC/CopD family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3895360 3895974 . + . ID=gene-NM058_20065;Name=NM058_20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20065 CP101611.1 Protein Homology CDS 3895360 3895974 . + 0 ID=cds-UTX05069.1;Parent=gene-NM058_20065;Dbxref=NCBI_GP:UTX05069.1;Name=UTX05069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388276.1;locus_tag=NM058_20065;product=DUF1775 domain-containing protein;protein_id=UTX05069.1;transl_table=11 CP101611.1 Genbank gene 3896019 3896804 . - . ID=gene-NM058_20070;Name=gdh;gbkey=Gene;gene=gdh;gene_biotype=protein_coding;locus_tag=NM058_20070 CP101611.1 Protein Homology CDS 3896019 3896804 . - 0 ID=cds-UTX05070.1;Parent=gene-NM058_20070;Dbxref=NCBI_GP:UTX05070.1;Name=UTX05070.1;gbkey=CDS;gene=gdh;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388275.1;locus_tag=NM058_20070;product=glucose 1-dehydrogenase;protein_id=UTX05070.1;transl_table=11 CP101611.1 Genbank pseudogene 3896823 3897684 . - . ID=gene-NM058_20075;Name=glcU;gbkey=Gene;gene=glcU;gene_biotype=pseudogene;locus_tag=NM058_20075;pseudo=true CP101611.1 Protein Homology CDS 3896823 3897684 . - 0 ID=cds-NM058_20075;Parent=gene-NM058_20075;Note=frameshifted;gbkey=CDS;gene=glcU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388274.1;locus_tag=NM058_20075;product=glucose uptake protein GlcU;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3897808 3899195 . - . ID=gene-NM058_20080;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=pseudogene;locus_tag=NM058_20080;pseudo=true CP101611.1 Protein Homology CDS 3897808 3899195 . - 0 ID=cds-NM058_20080;Parent=gene-NM058_20080;Note=frameshifted;gbkey=CDS;gene=gabD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388273.1;locus_tag=NM058_20080;product=succinate-semialdehyde dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3899264 3900574 . - . ID=gene-NM058_20085;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=NM058_20085 CP101611.1 Protein Homology CDS 3899264 3900574 . - 0 ID=cds-UTX05071.1;Parent=gene-NM058_20085;Dbxref=NCBI_GP:UTX05071.1;Name=UTX05071.1;gbkey=CDS;gene=gabT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388272.1;locus_tag=NM058_20085;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=UTX05071.1;transl_table=11 CP101611.1 Genbank gene 3900680 3902119 . + . ID=gene-NM058_20090;Name=gabR;gbkey=Gene;gene=gabR;gene_biotype=protein_coding;locus_tag=NM058_20090 CP101611.1 Protein Homology CDS 3900680 3902119 . + 0 ID=cds-UTX05072.1;Parent=gene-NM058_20090;Dbxref=NCBI_GP:UTX05072.1;Name=UTX05072.1;gbkey=CDS;gene=gabR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388271.1;locus_tag=NM058_20090;product=transcriptional regulator GabR;protein_id=UTX05072.1;transl_table=11 CP101611.1 Genbank gene 3902121 3902435 . - . ID=gene-NM058_20095;Name=NM058_20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20095 CP101611.1 Protein Homology CDS 3902121 3902435 . - 0 ID=cds-UTX05073.1;Parent=gene-NM058_20095;Dbxref=NCBI_GP:UTX05073.1;Name=UTX05073.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388270.1;locus_tag=NM058_20095;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=UTX05073.1;transl_table=11 CP101611.1 Genbank gene 3902574 3902861 . + . ID=gene-NM058_20100;Name=NM058_20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20100 CP101611.1 Protein Homology CDS 3902574 3902861 . + 0 ID=cds-UTX05074.1;Parent=gene-NM058_20100;Dbxref=NCBI_GP:UTX05074.1;Name=UTX05074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388269.1;locus_tag=NM058_20100;product=antibiotic biosynthesis monooxygenase;protein_id=UTX05074.1;transl_table=11 CP101611.1 Genbank gene 3902878 3903627 . + . ID=gene-NM058_20105;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=NM058_20105 CP101611.1 Protein Homology CDS 3902878 3903627 . + 0 ID=cds-UTX05075.1;Parent=gene-NM058_20105;Dbxref=NCBI_GP:UTX05075.1;Name=UTX05075.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388268.1;locus_tag=NM058_20105;product=oxygen-insensitive NADPH nitroreductase;protein_id=UTX05075.1;transl_table=11 CP101611.1 Genbank gene 3903790 3904668 . + . ID=gene-NM058_20110;Name=NM058_20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20110 CP101611.1 Protein Homology CDS 3903790 3904668 . + 0 ID=cds-UTX05076.1;Parent=gene-NM058_20110;Dbxref=NCBI_GP:UTX05076.1;Name=UTX05076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388267.2;locus_tag=NM058_20110;product=TetR/AcrR family transcriptional regulator;protein_id=UTX05076.1;transl_table=11 CP101611.1 Genbank gene 3904688 3906106 . + . ID=gene-NM058_20115;Name=NM058_20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20115 CP101611.1 Protein Homology CDS 3904688 3906106 . + 0 ID=cds-UTX05077.1;Parent=gene-NM058_20115;Dbxref=NCBI_GP:UTX05077.1;Name=UTX05077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388266.1;locus_tag=NM058_20115;product=multidrug efflux MFS transporter;protein_id=UTX05077.1;transl_table=11 CP101611.1 Genbank gene 3906151 3907104 . - . ID=gene-NM058_20120;Name=NM058_20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20120 CP101611.1 Protein Homology CDS 3906151 3907104 . - 0 ID=cds-UTX05078.1;Parent=gene-NM058_20120;Dbxref=NCBI_GP:UTX05078.1;Name=UTX05078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388265.1;locus_tag=NM058_20120;product=siderophore ABC transporter substrate-binding protein;protein_id=UTX05078.1;transl_table=11 CP101611.1 Genbank gene 3907126 3907884 . - . ID=gene-NM058_20125;Name=yclP;gbkey=Gene;gene=yclP;gene_biotype=protein_coding;gene_synonym=pbtP;locus_tag=NM058_20125 CP101611.1 Protein Homology CDS 3907126 3907884 . - 0 ID=cds-UTX05079.1;Parent=gene-NM058_20125;Dbxref=NCBI_GP:UTX05079.1;Name=UTX05079.1;gbkey=CDS;gene=yclP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388264.1;locus_tag=NM058_20125;product=petrobactin ABC transporter ATP-binding protein YclP;protein_id=UTX05079.1;transl_table=11 CP101611.1 Genbank gene 3907878 3908825 . - . ID=gene-NM058_20130;Name=yclO;gbkey=Gene;gene=yclO;gene_biotype=protein_coding;gene_synonym=pbtO;locus_tag=NM058_20130 CP101611.1 Protein Homology CDS 3907878 3908825 . - 0 ID=cds-UTX05080.1;Parent=gene-NM058_20130;Dbxref=NCBI_GP:UTX05080.1;Name=UTX05080.1;gbkey=CDS;gene=yclO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388263.1;locus_tag=NM058_20130;product=petrobactin ABC transporter permease YclO;protein_id=UTX05080.1;transl_table=11 CP101611.1 Genbank gene 3908818 3909768 . - . ID=gene-NM058_20135;Name=yclN;gbkey=Gene;gene=yclN;gene_biotype=protein_coding;gene_synonym=pbtN;locus_tag=NM058_20135 CP101611.1 Protein Homology CDS 3908818 3909768 . - 0 ID=cds-UTX05081.1;Parent=gene-NM058_20135;Dbxref=NCBI_GP:UTX05081.1;Name=UTX05081.1;gbkey=CDS;gene=yclN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388262.1;locus_tag=NM058_20135;product=petrobactin ABC transporter permease YclN;protein_id=UTX05081.1;transl_table=11 CP101611.1 Genbank pseudogene 3910153 3911518 . + . ID=gene-NM058_20140;Name=NM058_20140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20140;pseudo=true CP101611.1 Protein Homology CDS 3910153 3911518 . + 0 ID=cds-NM058_20140;Parent=gene-NM058_20140;Note=frameshifted;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388261.1;locus_tag=NM058_20140;product=aspartate kinase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3911669 3911776 . + . ID=gene-NM058_20145;Name=NM058_20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20145 CP101611.1 Protein Homology CDS 3911669 3911776 . + 0 ID=cds-UTX05082.1;Parent=gene-NM058_20145;Dbxref=NCBI_GP:UTX05082.1;Name=UTX05082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097677.1;locus_tag=NM058_20145;product=YjcZ family sporulation protein;protein_id=UTX05082.1;transl_table=11 CP101611.1 Genbank gene 3911871 3911993 . - . ID=gene-NM058_20150;Name=phrC;gbkey=Gene;gene=phrC;gene_biotype=protein_coding;locus_tag=NM058_20150 CP101611.1 Protein Homology CDS 3911871 3911993 . - 0 ID=cds-UTX05083.1;Parent=gene-NM058_20150;Dbxref=NCBI_GP:UTX05083.1;Name=UTX05083.1;gbkey=CDS;gene=phrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388260.1;locus_tag=NM058_20150;product=phosphatase RapC inhibitor PhrC;protein_id=UTX05083.1;transl_table=11 CP101611.1 Genbank gene 3911977 3913125 . - . ID=gene-NM058_20155;Name=rapC;gbkey=Gene;gene=rapC;gene_biotype=protein_coding;locus_tag=NM058_20155 CP101611.1 Protein Homology CDS 3911977 3913125 . - 0 ID=cds-UTX05084.1;Parent=gene-NM058_20155;Dbxref=NCBI_GP:UTX05084.1;Name=UTX05084.1;gbkey=CDS;gene=rapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388259.1;locus_tag=NM058_20155;product=response regulator aspartate phosphatase RapC;protein_id=UTX05084.1;transl_table=11 CP101611.1 Genbank gene 3913283 3914704 . - . ID=gene-NM058_20160;Name=NM058_20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20160 CP101611.1 Protein Homology CDS 3913283 3914704 . - 0 ID=cds-UTX05085.1;Parent=gene-NM058_20160;Dbxref=NCBI_GP:UTX05085.1;Name=UTX05085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388258.1;locus_tag=NM058_20160;product=HAMP domain-containing histidine kinase;protein_id=UTX05085.1;transl_table=11 CP101611.1 Genbank pseudogene 3914691 3915373 . - . ID=gene-NM058_20165;Name=yclJ;gbkey=Gene;gene=yclJ;gene_biotype=pseudogene;locus_tag=NM058_20165;pseudo=true CP101611.1 Protein Homology CDS 3914691 3915373 . - 0 ID=cds-NM058_20165;Parent=gene-NM058_20165;Note=frameshifted;gbkey=CDS;gene=yclJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388257.1;locus_tag=NM058_20165;product=two-component system response regulator YclJ;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3915586 3917045 . + . ID=gene-NM058_20170;Name=NM058_20170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20170;pseudo=true CP101611.1 Protein Homology CDS 3915586 3917045 . + 0 ID=cds-NM058_20170;Parent=gene-NM058_20170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388256.2;locus_tag=NM058_20170;product=ABC transporter permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3917061 3917741 . + . ID=gene-NM058_20175;Name=NM058_20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20175 CP101611.1 Protein Homology CDS 3917061 3917741 . + 0 ID=cds-UTX05086.1;Parent=gene-NM058_20175;Dbxref=NCBI_GP:UTX05086.1;Name=UTX05086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388255.1;locus_tag=NM058_20175;product=ABC transporter ATP-binding protein;protein_id=UTX05086.1;transl_table=11 CP101611.1 Genbank pseudogene 3917848 3918969 . - . ID=gene-NM058_20180;Name=NM058_20180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20180;pseudo=true CP101611.1 Protein Homology CDS 3917848 3918969 . - 0 ID=cds-NM058_20180;Parent=gene-NM058_20180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003224977.1;locus_tag=NM058_20180;product=spore germination protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3918994 3920217 . - . ID=gene-NM058_20185;Name=NM058_20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20185 CP101611.1 Protein Homology CDS 3918994 3920217 . - 0 ID=cds-UTX05087.1;Parent=gene-NM058_20185;Dbxref=NCBI_GP:UTX05087.1;Name=UTX05087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388253.1;locus_tag=NM058_20185;product=Ger(x)C family spore germination protein;protein_id=UTX05087.1;transl_table=11 CP101611.1 Genbank pseudogene 3920207 3921840 . - . ID=gene-NM058_20190;Name=NM058_20190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20190;pseudo=true CP101611.1 Protein Homology CDS 3920207 3921840 . - 0 ID=cds-NM058_20190;Parent=gene-NM058_20190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388252.1;locus_tag=NM058_20190;product=spore germination protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3921965 3922183 . + . ID=gene-NM058_20195;Name=NM058_20195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20195;pseudo=true CP101611.1 Protein Homology CDS 3921965 3922183 . + 0 ID=cds-NM058_20195;Parent=gene-NM058_20195;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388251.1;locus_tag=NM058_20195;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3922201 3923955 . - . ID=gene-NM058_20200;Name=NM058_20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20200 CP101611.1 Protein Homology CDS 3922201 3923955 . - 0 ID=cds-UTX05088.1;Parent=gene-NM058_20200;Dbxref=NCBI_GP:UTX05088.1;Name=UTX05088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257458.1;locus_tag=NM058_20200;product=right-handed parallel beta-helix repeat-containing protein;protein_id=UTX05088.1;transl_table=11 CP101611.1 Genbank gene 3924235 3925713 . + . ID=gene-NM058_20205;Name=NM058_20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20205 CP101611.1 Protein Homology CDS 3924235 3925713 . + 0 ID=cds-UTX05089.1;Parent=gene-NM058_20205;Dbxref=NCBI_GP:UTX05089.1;Name=UTX05089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388249.2;locus_tag=NM058_20205;product=peptide MFS transporter;protein_id=UTX05089.1;transl_table=11 CP101611.1 Genbank pseudogene 3925753 3926597 . - . ID=gene-NM058_20210;Name=NM058_20210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20210;pseudo=true CP101611.1 Protein Homology CDS 3925753 3926597 . - 0 ID=cds-NM058_20210;Parent=gene-NM058_20210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388248.2;locus_tag=NM058_20210;product=alpha/beta hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3926666 3927130 . - . ID=gene-NM058_20215;Name=NM058_20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20215 CP101611.1 Protein Homology CDS 3926666 3927130 . - 0 ID=cds-UTX07112.1;Parent=gene-NM058_20215;Dbxref=NCBI_GP:UTX07112.1;Name=UTX07112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388247.2;locus_tag=NM058_20215;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=UTX07112.1;transl_table=11 CP101611.1 Genbank gene 3927127 3927354 . - . ID=gene-NM058_20220;Name=bsdD;gbkey=Gene;gene=bsdD;gene_biotype=protein_coding;locus_tag=NM058_20220 CP101611.1 Protein Homology CDS 3927127 3927354 . - 0 ID=cds-UTX05090.1;Parent=gene-NM058_20220;Dbxref=NCBI_GP:UTX05090.1;Name=UTX05090.1;gbkey=CDS;gene=bsdD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097675.1;locus_tag=NM058_20220;product=phenolic acid decarboxylase subunit BsdD;protein_id=UTX05090.1;transl_table=11 CP101611.1 Genbank gene 3927360 3928787 . - . ID=gene-NM058_20225;Name=bsdC;gbkey=Gene;gene=bsdC;gene_biotype=protein_coding;locus_tag=NM058_20225 CP101611.1 Protein Homology CDS 3927360 3928787 . - 0 ID=cds-UTX05091.1;Parent=gene-NM058_20225;Dbxref=NCBI_GP:UTX05091.1;Name=UTX05091.1;gbkey=CDS;gene=bsdC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017811075.1;locus_tag=NM058_20225;product=phenolic acid decarboxylase BsdC;protein_id=UTX05091.1;transl_table=11 CP101611.1 Genbank pseudogene 3928790 3929402 . - . ID=gene-NM058_20230;Name=NM058_20230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20230;pseudo=true CP101611.1 Protein Homology CDS 3928790 3929402 . - 0 ID=cds-NM058_20230;Parent=gene-NM058_20230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388245.1;locus_tag=NM058_20230;product=UbiX family flavin prenyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3929492 3930364 . + . ID=gene-NM058_20235;Name=bsdA;gbkey=Gene;gene=bsdA;gene_biotype=protein_coding;locus_tag=NM058_20235 CP101611.1 Protein Homology CDS 3929492 3930364 . + 0 ID=cds-UTX05092.1;Parent=gene-NM058_20235;Dbxref=NCBI_GP:UTX05092.1;Name=UTX05092.1;gbkey=CDS;gene=bsdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388244.1;locus_tag=NM058_20235;product=transcriptional regulator BsdA;protein_id=UTX05092.1;transl_table=11 CP101611.1 Genbank gene 3930480 3931286 . + . ID=gene-NM058_20240;Name=tcyA;gbkey=Gene;gene=tcyA;gene_biotype=protein_coding;locus_tag=NM058_20240 CP101611.1 Protein Homology CDS 3930480 3931286 . + 0 ID=cds-UTX05093.1;Parent=gene-NM058_20240;Dbxref=NCBI_GP:UTX05093.1;Name=UTX05093.1;gbkey=CDS;gene=tcyA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388243.2;locus_tag=NM058_20240;product=cystine ABC transporter substrate-binding lipoprotein TcyA;protein_id=UTX05093.1;transl_table=11 CP101611.1 Genbank gene 3931273 3931977 . + . ID=gene-NM058_20245;Name=tcyB;gbkey=Gene;gene=tcyB;gene_biotype=protein_coding;locus_tag=NM058_20245 CP101611.1 Protein Homology CDS 3931273 3931977 . + 0 ID=cds-UTX05094.1;Parent=gene-NM058_20245;Dbxref=NCBI_GP:UTX05094.1;Name=UTX05094.1;gbkey=CDS;gene=tcyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388242.1;locus_tag=NM058_20245;product=cystine ABC transporter permease TcyB;protein_id=UTX05094.1;transl_table=11 CP101611.1 Genbank gene 3931991 3932734 . + . ID=gene-NM058_20250;Name=tcyC;gbkey=Gene;gene=tcyC;gene_biotype=protein_coding;locus_tag=NM058_20250 CP101611.1 Protein Homology CDS 3931991 3932734 . + 0 ID=cds-UTX05095.1;Parent=gene-NM058_20250;Dbxref=NCBI_GP:UTX05095.1;Name=UTX05095.1;gbkey=CDS;gene=tcyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388241.2;locus_tag=NM058_20250;product=cystine ABC transporter ATP-binding protein TcyC;protein_id=UTX05095.1;transl_table=11 CP101611.1 Genbank gene 3933055 3933702 . + . ID=gene-NM058_20255;Name=NM058_20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20255 CP101611.1 Protein Homology CDS 3933055 3933702 . + 0 ID=cds-UTX05096.1;Parent=gene-NM058_20255;Dbxref=NCBI_GP:UTX05096.1;Name=UTX05096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388240.2;locus_tag=NM058_20255;product=YitT family protein;protein_id=UTX05096.1;transl_table=11 CP101611.1 Genbank gene 3933804 3934478 . + . ID=gene-NM058_20260;Name=NM058_20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20260 CP101611.1 Protein Homology CDS 3933804 3934478 . + 0 ID=cds-UTX05097.1;Parent=gene-NM058_20260;Dbxref=NCBI_GP:UTX05097.1;Name=UTX05097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003234549.1;locus_tag=NM058_20260;product=4'-phosphopantetheinyl transferase;protein_id=UTX05097.1;transl_table=11 CP101611.1 Genbank gene 3934473 3935807 . - . ID=gene-NM058_20265;Name=NM058_20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20265 CP101611.1 Protein Homology CDS 3934473 3935807 . - 0 ID=cds-UTX05098.1;Parent=gene-NM058_20265;Dbxref=NCBI_GP:UTX05098.1;Name=UTX05098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388238.1;locus_tag=NM058_20265;product=PLP-dependent aminotransferase family protein;protein_id=UTX05098.1;transl_table=11 CP101611.1 Genbank gene 3935932 3936876 . + . ID=gene-NM058_20270;Name=NM058_20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20270 CP101611.1 Protein Homology CDS 3935932 3936876 . + 0 ID=cds-UTX05099.1;Parent=gene-NM058_20270;Dbxref=NCBI_GP:UTX05099.1;Name=UTX05099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240146.1;locus_tag=NM058_20270;product=DMT family transporter;protein_id=UTX05099.1;transl_table=11 CP101611.1 Genbank gene 3936926 3937465 . + . ID=gene-NM058_20275;Name=NM058_20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20275 CP101611.1 Protein Homology CDS 3936926 3937465 . + 0 ID=cds-UTX05100.1;Parent=gene-NM058_20275;Dbxref=NCBI_GP:UTX05100.1;Name=UTX05100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257448.1;locus_tag=NM058_20275;product=YcxB family protein;protein_id=UTX05100.1;transl_table=11 CP101611.1 Genbank pseudogene 3937491 3938715 . - . ID=gene-NM058_20280;Name=NM058_20280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20280;pseudo=true CP101611.1 Protein Homology CDS 3937491 3938715 . - 0 ID=cds-NM058_20280;Parent=gene-NM058_20280;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003240144.1;locus_tag=NM058_20280;product=MFS transporter;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3938813 3939540 . - . ID=gene-NM058_20285;Name=srfAD;gbkey=Gene;gene=srfAD;gene_biotype=pseudogene;locus_tag=NM058_20285;pseudo=true CP101611.1 Protein Homology CDS 3938813 3939540 . - 0 ID=cds-NM058_20285;Parent=gene-NM058_20285;Note=frameshifted;gbkey=CDS;gene=srfAD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003224939.1;locus_tag=NM058_20285;product=surfactin biosynthesis thioesterase SrfAD;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3939568 3943393 . - . ID=gene-NM058_20290;Name=srfAC;gbkey=Gene;gene=srfAC;gene_biotype=pseudogene;locus_tag=NM058_20290;pseudo=true CP101611.1 Protein Homology CDS 3939568 3943393 . - 0 ID=cds-NM058_20290;Parent=gene-NM058_20290;Note=frameshifted;gbkey=CDS;gene=srfAC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388233.2;locus_tag=NM058_20290;product=surfactin non-ribosomal peptide synthetase SrfAC;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3943430 3948286 . - . ID=gene-NM058_20295;Name=NM058_20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20295 CP101611.1 Protein Homology CDS 3943430 3948286 . - 0 ID=cds-UTX05101.1;Parent=gene-NM058_20295;Dbxref=NCBI_GP:UTX05101.1;Name=UTX05101.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NM058_20295;product=amino acid adenylation domain-containing protein;protein_id=UTX05101.1;transl_table=11 CP101611.1 Genbank gene 3948283 3949713 . - . ID=gene-NM058_20300;Name=NM058_20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20300 CP101611.1 Protein Homology CDS 3948283 3949713 . - 0 ID=cds-UTX07113.1;Parent=gene-NM058_20300;Dbxref=NCBI_GP:UTX07113.1;Name=UTX07113.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01733.1;locus_tag=NM058_20300;product=amino acid adenylation domain-containing protein;protein_id=UTX07113.1;transl_table=11 CP101611.1 Genbank pseudogene 3949786 3950958 . - . ID=gene-NM058_20305;Name=NM058_20305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20305;pseudo=true CP101611.1 Protein Homology CDS 3949786 3950958 . - 0 ID=cds-NM058_20305;Parent=gene-NM058_20305;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NM058_20305;product=condensation domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3950904 3951044 . - . ID=gene-NM058_20310;Name=comS;gbkey=Gene;gene=comS;gene_biotype=protein_coding;locus_tag=NM058_20310 CP101611.1 Protein Homology CDS 3950904 3951044 . - 0 ID=cds-UTX07114.1;Parent=gene-NM058_20310;Dbxref=NCBI_GP:UTX07114.1;Name=UTX07114.1;gbkey=CDS;gene=comS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388232.1;locus_tag=NM058_20310;product=competence protein ComS;protein_id=UTX07114.1;transl_table=11 CP101611.1 Genbank pseudogene 3951136 3952170 . - . ID=gene-NM058_20315;Name=NM058_20315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20315;pseudo=true CP101611.1 Protein Homology CDS 3951136 3952170 . - 0 ID=cds-NM058_20315;Parent=gene-NM058_20315;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.2;locus_tag=NM058_20315;product=non-ribosomal peptide synthetase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3952130 3952855 . - . ID=gene-NM058_20320;Name=NM058_20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20320 CP101611.1 Protein Homology CDS 3952130 3952855 . - 0 ID=cds-UTX05102.1;Parent=gene-NM058_20320;Dbxref=NCBI_GP:UTX05102.1;Name=UTX05102.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.2;locus_tag=NM058_20320;product=AMP-binding protein;protein_id=UTX05102.1;transl_table=11 CP101611.1 Genbank gene 3952791 3954176 . - . ID=gene-NM058_20325;Name=NM058_20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20325 CP101611.1 Protein Homology CDS 3952791 3954176 . - 0 ID=cds-UTX05103.1;Parent=gene-NM058_20325;Dbxref=NCBI_GP:UTX05103.1;Name=UTX05103.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NM058_20325;product=condensation domain-containing protein;protein_id=UTX05103.1;transl_table=11 CP101611.1 Genbank gene 3954189 3955250 . - . ID=gene-NM058_20330;Name=NM058_20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20330 CP101611.1 Protein Homology CDS 3954189 3955250 . - 0 ID=cds-UTX05104.1;Parent=gene-NM058_20330;Dbxref=NCBI_GP:UTX05104.1;Name=UTX05104.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NM058_20330;product=condensation domain-containing protein;protein_id=UTX05104.1;transl_table=11 CP101611.1 Genbank gene 3955177 3955791 . - . ID=gene-NM058_20335;Name=NM058_20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20335 CP101611.1 Protein Homology CDS 3955177 3955791 . - 0 ID=cds-UTX05105.1;Parent=gene-NM058_20335;Dbxref=NCBI_GP:UTX05105.1;Name=UTX05105.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NM058_20335;product=condensation domain-containing protein;protein_id=UTX05105.1;transl_table=11 CP101611.1 Genbank gene 3955701 3964949 . - . ID=gene-NM058_20340;Name=NM058_20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20340 CP101611.1 Protein Homology CDS 3955701 3964949 . - 0 ID=cds-UTX05106.1;Parent=gene-NM058_20340;Dbxref=NCBI_GP:UTX05106.1;Name=UTX05106.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF003417.0;locus_tag=NM058_20340;product=amino acid adenylation domain-containing protein;protein_id=UTX05106.1;transl_table=11 CP101611.1 Genbank gene 3965525 3965887 . - . ID=gene-NM058_20345;Name=hxlR;gbkey=Gene;gene=hxlR;gene_biotype=protein_coding;locus_tag=NM058_20345 CP101611.1 Protein Homology CDS 3965525 3965887 . - 0 ID=cds-UTX05107.1;Parent=gene-NM058_20345;Dbxref=NCBI_GP:UTX05107.1;Name=UTX05107.1;gbkey=CDS;gene=hxlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388229.2;locus_tag=NM058_20345;product=transcriptional activator HxlR;protein_id=UTX05107.1;transl_table=11 CP101611.1 Genbank gene 3966119 3966751 . + . ID=gene-NM058_20350;Name=hxlA;gbkey=Gene;gene=hxlA;gene_biotype=protein_coding;locus_tag=NM058_20350 CP101611.1 Protein Homology CDS 3966119 3966751 . + 0 ID=cds-UTX05108.1;Parent=gene-NM058_20350;Dbxref=NCBI_GP:UTX05108.1;Name=UTX05108.1;Ontology_term=GO:0005975,GO:0043801;gbkey=CDS;gene=hxlA;go_function=hexulose-6-phosphate synthase activity|0043801||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388228.1;locus_tag=NM058_20350;product=3-hexulose-6-phosphate synthase;protein_id=UTX05108.1;transl_table=11 CP101611.1 Genbank gene 3966757 3967314 . + . ID=gene-NM058_20355;Name=hxlB;gbkey=Gene;gene=hxlB;gene_biotype=protein_coding;locus_tag=NM058_20355 CP101611.1 Protein Homology CDS 3966757 3967314 . + 0 ID=cds-UTX05109.1;Parent=gene-NM058_20355;Dbxref=NCBI_GP:UTX05109.1;Name=UTX05109.1;Ontology_term=GO:1901135,GO:0016853;gbkey=CDS;gene=hxlB;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388227.1;locus_tag=NM058_20355;product=6-phospho-3-hexuloisomerase;protein_id=UTX05109.1;transl_table=11 CP101611.1 Genbank gene 3967426 3969150 . + . ID=gene-NM058_20360;Name=tlpC;gbkey=Gene;gene=tlpC;gene_biotype=protein_coding;locus_tag=NM058_20360 CP101611.1 Protein Homology CDS 3967426 3969150 . + 0 ID=cds-UTX05110.1;Parent=gene-NM058_20360;Dbxref=NCBI_GP:UTX05110.1;Name=UTX05110.1;Ontology_term=GO:0004888;gbkey=CDS;gene=tlpC;go_function=transmembrane signaling receptor activity|0004888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257440.1;locus_tag=NM058_20360;product=methyl-accepting chemotaxis protein TlpC;protein_id=UTX05110.1;transl_table=11 CP101611.1 Genbank gene 3969325 3969774 . + . ID=gene-NM058_20365;Name=nucA;gbkey=Gene;gene=nucA;gene_biotype=protein_coding;locus_tag=NM058_20365 CP101611.1 Protein Homology CDS 3969325 3969774 . + 0 ID=cds-UTX05111.1;Parent=gene-NM058_20365;Dbxref=NCBI_GP:UTX05111.1;Name=UTX05111.1;gbkey=CDS;gene=nucA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388225.3;locus_tag=NM058_20365;product=DNA-entry nuclease;protein_id=UTX05111.1;transl_table=11 CP101611.1 Genbank gene 3969801 3970199 . + . ID=gene-NM058_20370;Name=nin;gbkey=Gene;gene=nin;gene_biotype=protein_coding;locus_tag=NM058_20370 CP101611.1 Protein Homology CDS 3969801 3970199 . + 0 ID=cds-UTX05112.1;Parent=gene-NM058_20370;Dbxref=NCBI_GP:UTX05112.1;Name=UTX05112.1;gbkey=CDS;gene=nin;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388224.1;locus_tag=NM058_20370;product=DNA-entry nuclease inhibitor;protein_id=UTX05112.1;transl_table=11 CP101611.1 Genbank gene 3970236 3971669 . - . ID=gene-NM058_20375;Name=bglC;gbkey=Gene;gene=bglC;gene_biotype=protein_coding;locus_tag=NM058_20375 CP101611.1 Protein Homology CDS 3970236 3971669 . - 0 ID=cds-UTX05113.1;Parent=gene-NM058_20375;Dbxref=NCBI_GP:UTX05113.1;Name=UTX05113.1;gbkey=CDS;gene=bglC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388223.1;locus_tag=NM058_20375;product=6-phospho-beta-glucosidase;protein_id=UTX05113.1;transl_table=11 CP101611.1 Genbank pseudogene 3971741 3972467 . - . ID=gene-NM058_20380;Name=NM058_20380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20380;pseudo=true CP101611.1 Protein Homology CDS 3971741 3972467 . - 0 ID=cds-NM058_20380;Parent=gene-NM058_20380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014662733.1;locus_tag=NM058_20380;product=AAA family ATPase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3972487 3972828 . - . ID=gene-NM058_20385;Name=NM058_20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20385 CP101611.1 Protein Homology CDS 3972487 3972828 . - 0 ID=cds-UTX05114.1;Parent=gene-NM058_20385;Dbxref=NCBI_GP:UTX05114.1;Name=UTX05114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003224880.1;locus_tag=NM058_20385;product=DUF3147 family protein;protein_id=UTX05114.1;transl_table=11 CP101611.1 Genbank gene 3972822 3973238 . - . ID=gene-NM058_20390;Name=NM058_20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20390 CP101611.1 Protein Homology CDS 3972822 3973238 . - 0 ID=cds-UTX07115.1;Parent=gene-NM058_20390;Dbxref=NCBI_GP:UTX07115.1;Name=UTX07115.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014478795.1;locus_tag=NM058_20390;product=MarR family transcriptional regulator;protein_id=UTX07115.1;transl_table=11 CP101611.1 Genbank gene 3973355 3973684 . - . ID=gene-NM058_20395;Name=NM058_20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20395 CP101611.1 Protein Homology CDS 3973355 3973684 . - 0 ID=cds-UTX05115.1;Parent=gene-NM058_20395;Dbxref=NCBI_GP:UTX05115.1;Name=UTX05115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388222.1;locus_tag=NM058_20395;product=YckD family protein;protein_id=UTX05115.1;transl_table=11 CP101611.1 Genbank pseudogene 3973767 3974221 . - . ID=gene-NM058_20400;Name=NM058_20400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20400;pseudo=true CP101611.1 Protein Homology CDS 3973767 3974221 . - 0 ID=cds-NM058_20400;Parent=gene-NM058_20400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388221.1;locus_tag=NM058_20400;product=RDD family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3974347 3974436 . - . ID=gene-NM058_20405;Name=NM058_20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20405 CP101611.1 Protein Homology CDS 3974347 3974436 . - 0 ID=cds-UTX05116.1;Parent=gene-NM058_20405;Dbxref=NCBI_GP:UTX05116.1;Name=UTX05116.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025193.2;locus_tag=NM058_20405;product=hypothetical protein;protein_id=UTX05116.1;transl_table=11 CP101611.1 Genbank gene 3974604 3975467 . + . ID=gene-NM058_20410;Name=NM058_20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20410 CP101611.1 Protein Homology CDS 3974604 3975467 . + 0 ID=cds-UTX05117.1;Parent=gene-NM058_20410;Dbxref=NCBI_GP:UTX05117.1;Name=UTX05117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388220.1;locus_tag=NM058_20410;product=transporter substrate-binding domain-containing protein;protein_id=UTX05117.1;transl_table=11 CP101611.1 Genbank gene 3975477 3976157 . + . ID=gene-NM058_20415;Name=NM058_20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20415 CP101611.1 Protein Homology CDS 3975477 3976157 . + 0 ID=cds-UTX05118.1;Parent=gene-NM058_20415;Dbxref=NCBI_GP:UTX05118.1;Name=UTX05118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388219.1;locus_tag=NM058_20415;product=amino acid ABC transporter permease;protein_id=UTX05118.1;transl_table=11 CP101611.1 Genbank gene 3976206 3977399 . - . ID=gene-NM058_20420;Name=zinU;gbkey=Gene;gene=zinU;gene_biotype=protein_coding;gene_synonym=yciC;locus_tag=NM058_20420 CP101611.1 Protein Homology CDS 3976206 3977399 . - 0 ID=cds-UTX05119.1;Parent=gene-NM058_20420;Dbxref=NCBI_GP:UTX05119.1;Name=UTX05119.1;gbkey=CDS;gene=zinU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388218.1;locus_tag=NM058_20420;product=zinc metallochaperone ZinU;protein_id=UTX05119.1;transl_table=11 CP101611.1 Genbank gene 3977436 3978608 . - . ID=gene-NM058_20425;Name=NM058_20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20425 CP101611.1 Protein Homology CDS 3977436 3978608 . - 0 ID=cds-UTX05120.1;Parent=gene-NM058_20425;Dbxref=NCBI_GP:UTX05120.1;Name=UTX05120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003241144.1;locus_tag=NM058_20425;product=lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein;protein_id=UTX05120.1;transl_table=11 CP101611.1 Genbank gene 3978691 3979275 . - . ID=gene-NM058_20430;Name=NM058_20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20430 CP101611.1 Protein Homology CDS 3978691 3979275 . - 0 ID=cds-UTX05121.1;Parent=gene-NM058_20430;Dbxref=NCBI_GP:UTX05121.1;Name=UTX05121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388217.2;locus_tag=NM058_20430;product=L%2CD-transpeptidase;protein_id=UTX05121.1;transl_table=11 CP101611.1 Genbank pseudogene 3979272 3980185 . - . ID=gene-NM058_20435;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=pseudogene;locus_tag=NM058_20435;pseudo=true CP101611.1 Protein Homology CDS 3979272 3980185 . - 0 ID=cds-NM058_20435;Parent=gene-NM058_20435;Note=frameshifted;Ontology_term=GO:0035998,GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;go_process=7%2C8-dihydroneopterin 3'-triphosphate biosynthetic process|0035998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388216.2;locus_tag=NM058_20435;product=GTP cyclohydrolase FolE2;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3980301 3981504 . - . ID=gene-NM058_20440;Name=NM058_20440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20440;pseudo=true CP101611.1 Protein Homology CDS 3980301 3981504 . - 0 ID=cds-NM058_20440;Parent=gene-NM058_20440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388215.2;locus_tag=NM058_20440;product=NarK/NasA family nitrate transporter;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3981670 3983986 . + . ID=gene-NM058_20445;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=pseudogene;locus_tag=NM058_20445;pseudo=true CP101611.1 Protein Homology CDS 3981670 3983986 . + 0 ID=cds-NM058_20445;Parent=gene-NM058_20445;Note=frameshifted;Ontology_term=GO:0042128,GO:0008942,GO:0016491,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388214.2;locus_tag=NM058_20445;product=nitrite reductase large subunit NirB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3983993 3986125 . + . ID=gene-NM058_20450;Name=nasC;gbkey=Gene;gene=nasC;gene_biotype=protein_coding;locus_tag=NM058_20450 CP101611.1 Protein Homology CDS 3983993 3986125 . + 0 ID=cds-UTX05122.1;Parent=gene-NM058_20450;Dbxref=NCBI_GP:UTX05122.1;Name=UTX05122.1;gbkey=CDS;gene=nasC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388213.2;locus_tag=NM058_20450;product=assimilatory nitrate reductase catalytic subunit;protein_id=UTX05122.1;transl_table=11 CP101611.1 Genbank pseudogene 3986245 3988660 . + . ID=gene-NM058_20455;Name=nasD;gbkey=Gene;gene=nasD;gene_biotype=pseudogene;locus_tag=NM058_20455;pseudo=true CP101611.1 Protein Homology CDS 3986245 3988660 . + 0 ID=cds-NM058_20455;Parent=gene-NM058_20455;Note=frameshifted;gbkey=CDS;gene=nasD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388212.1;locus_tag=NM058_20455;product=NADPH-nitrite reductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3988693 3989013 . + . ID=gene-NM058_20460;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=NM058_20460 CP101611.1 Protein Homology CDS 3988693 3989013 . + 0 ID=cds-UTX05123.1;Parent=gene-NM058_20460;Dbxref=NCBI_GP:UTX05123.1;Name=UTX05123.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388211.1;locus_tag=NM058_20460;product=nitrite reductase small subunit NirD;protein_id=UTX05123.1;transl_table=11 CP101611.1 Genbank pseudogene 3989075 3990525 . + . ID=gene-NM058_20465;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=pseudogene;locus_tag=NM058_20465;pseudo=true CP101611.1 Protein Homology CDS 3989075 3990525 . + 0 ID=cds-NM058_20465;Parent=gene-NM058_20465;Note=frameshifted;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388210.1;locus_tag=NM058_20465;product=uroporphyrinogen-III C-methyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3990554 3991564 . - . ID=gene-NM058_20470;Name=ffoR;gbkey=Gene;gene=ffoR;gene_biotype=protein_coding;locus_tag=NM058_20470 CP101611.1 Protein Homology CDS 3990554 3991564 . - 0 ID=cds-UTX05124.1;Parent=gene-NM058_20470;Dbxref=NCBI_GP:UTX05124.1;Name=UTX05124.1;gbkey=CDS;gene=ffoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388209.1;locus_tag=NM058_20470;product=ferredoxin--NADP(+) reductase;protein_id=UTX05124.1;transl_table=11 CP101611.1 Genbank pseudogene 3991727 3992581 . + . ID=gene-NM058_20475;Name=NM058_20475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20475;pseudo=true CP101611.1 Protein Homology CDS 3991727 3992581 . + 0 ID=cds-NM058_20475;Parent=gene-NM058_20475;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388208.1;locus_tag=NM058_20475;product=alpha/beta hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3992678 3993562 . + . ID=gene-NM058_20480;Name=NM058_20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20480 CP101611.1 Protein Homology CDS 3992678 3993562 . + 0 ID=cds-UTX07116.1;Parent=gene-NM058_20480;Dbxref=NCBI_GP:UTX07116.1;Name=UTX07116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388207.1;locus_tag=NM058_20480;product=permease;protein_id=UTX07116.1;transl_table=11 CP101611.1 Genbank gene 3993567 3994418 . + . ID=gene-NM058_20485;Name=NM058_20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20485 CP101611.1 Protein Homology CDS 3993567 3994418 . + 0 ID=cds-UTX05125.1;Parent=gene-NM058_20485;Dbxref=NCBI_GP:UTX05125.1;Name=UTX05125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388206.1;locus_tag=NM058_20485;product=TIGR03943 family protein;protein_id=UTX05125.1;transl_table=11 CP101611.1 Genbank gene 3994456 3995691 . - . ID=gene-NM058_20490;Name=putR;gbkey=Gene;gene=putR;gene_biotype=protein_coding;gene_synonym=ycgP;locus_tag=NM058_20490 CP101611.1 Protein Homology CDS 3994456 3995691 . - 0 ID=cds-UTX05126.1;Parent=gene-NM058_20490;Dbxref=NCBI_GP:UTX05126.1;Name=UTX05126.1;gbkey=CDS;gene=putR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388205.2;locus_tag=NM058_20490;product=proline utilization transcriptional regulator PutR;protein_id=UTX05126.1;transl_table=11 CP101611.1 Genbank pseudogene 3995842 3997261 . - . ID=gene-NM058_20495;Name=putP;gbkey=Gene;gene=putP;gene_biotype=pseudogene;locus_tag=NM058_20495;pseudo=true CP101611.1 Protein Homology CDS 3995842 3997261 . - 0 ID=cds-NM058_20495;Parent=gene-NM058_20495;Note=frameshifted;Ontology_term=GO:0015824,GO:0005298,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA;go_process=proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388204.2;locus_tag=NM058_20495;product=sodium/proline symporter PutP;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 3997386 3998932 . - . ID=gene-NM058_20500;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=pseudogene;locus_tag=NM058_20500;pseudo=true CP101611.1 Protein Homology CDS 3997386 3998932 . - 0 ID=cds-NM058_20500;Parent=gene-NM058_20500;Note=frameshifted;Ontology_term=GO:0006562,GO:0003842;gbkey=CDS;gene=pruA;go_function=1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA;go_process=proline catabolic process|0006562||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388203.2;locus_tag=NM058_20500;product=L-glutamate gamma-semialdehyde dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 3998950 3999861 . - . ID=gene-NM058_20505;Name=putB;gbkey=Gene;gene=putB;gene_biotype=protein_coding;locus_tag=NM058_20505 CP101611.1 Protein Homology CDS 3998950 3999861 . - 0 ID=cds-UTX07117.1;Parent=gene-NM058_20505;Dbxref=NCBI_GP:UTX07117.1;Name=UTX07117.1;gbkey=CDS;gene=putB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388202.1;locus_tag=NM058_20505;product=proline dehydrogenase PutB;protein_id=UTX07117.1;transl_table=11 CP101611.1 Genbank gene 4000051 4000833 . - . ID=gene-NM058_20510;Name=NM058_20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20510 CP101611.1 Protein Homology CDS 4000051 4000833 . - 0 ID=cds-UTX05127.1;Parent=gene-NM058_20510;Dbxref=NCBI_GP:UTX05127.1;Name=UTX05127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388201.1;locus_tag=NM058_20510;product=nucleotidyltransferase domain-containing protein;protein_id=UTX05127.1;transl_table=11 CP101611.1 Genbank gene 4000918 4001874 . - . ID=gene-NM058_20515;Name=cah;gbkey=Gene;gene=cah;gene_biotype=protein_coding;locus_tag=NM058_20515 CP101611.1 Protein Homology CDS 4000918 4001874 . - 0 ID=cds-UTX05128.1;Parent=gene-NM058_20515;Dbxref=NCBI_GP:UTX05128.1;Name=UTX05128.1;gbkey=CDS;gene=cah;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388200.1;locus_tag=NM058_20515;product=cephalosporin C deacetylase;protein_id=UTX05128.1;transl_table=11 CP101611.1 Genbank gene 4001946 4002920 . - . ID=gene-NM058_20520;Name=NM058_20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20520 CP101611.1 Protein Homology CDS 4001946 4002920 . - 0 ID=cds-UTX05129.1;Parent=gene-NM058_20520;Dbxref=NCBI_GP:UTX05129.1;Name=UTX05129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388199.2;locus_tag=NM058_20520;product=LysR family transcriptional regulator;protein_id=UTX05129.1;transl_table=11 CP101611.1 Genbank gene 4003037 4003795 . + . ID=gene-NM058_20525;Name=NM058_20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20525 CP101611.1 Protein Homology CDS 4003037 4003795 . + 0 ID=cds-UTX05130.1;Parent=gene-NM058_20525;Dbxref=NCBI_GP:UTX05130.1;Name=UTX05130.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257414.1;locus_tag=NM058_20525;product=methyltransferase domain-containing protein;protein_id=UTX05130.1;transl_table=11 CP101611.1 Genbank gene 4003826 4004386 . - . ID=gene-NM058_20530;Name=NM058_20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20530 CP101611.1 Protein Homology CDS 4003826 4004386 . - 0 ID=cds-UTX05131.1;Parent=gene-NM058_20530;Dbxref=NCBI_GP:UTX05131.1;Name=UTX05131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388197.2;locus_tag=NM058_20530;product=shikimate kinase;protein_id=UTX05131.1;transl_table=11 CP101611.1 Genbank pseudogene 4004658 4005249 . + . ID=gene-NM058_20535;Name=tmrB;gbkey=Gene;gene=tmrB;gene_biotype=pseudogene;locus_tag=NM058_20535;pseudo=true CP101611.1 Protein Homology CDS 4004658 4005249 . + 0 ID=cds-NM058_20535;Parent=gene-NM058_20535;Note=frameshifted;gbkey=CDS;gene=tmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388196.2;locus_tag=NM058_20535;product=tunicamycin resistance ATP-binding TmrB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4005299 4006117 . - . ID=gene-NM058_20540;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=NM058_20540 CP101611.1 Protein Homology CDS 4005299 4006117 . - 0 ID=cds-UTX05132.1;Parent=gene-NM058_20540;Dbxref=NCBI_GP:UTX05132.1;Name=UTX05132.1;gbkey=CDS;gene=nadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388195.1;locus_tag=NM058_20540;product=ammonia-dependent NAD(+) synthetase;protein_id=UTX05132.1;transl_table=11 CP101611.1 Genbank pseudogene 4006250 4006845 . - . ID=gene-NM058_20545;Name=NM058_20545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20545;pseudo=true CP101611.1 Protein Homology CDS 4006250 4006845 . - 0 ID=cds-NM058_20545;Parent=gene-NM058_20545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388194.3;locus_tag=NM058_20545;product=DUF1989 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4006976 4008316 . + . ID=gene-NM058_20550;Name=NM058_20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20550 CP101611.1 Protein Homology CDS 4006976 4008316 . + 0 ID=cds-UTX05133.1;Parent=gene-NM058_20550;Dbxref=NCBI_GP:UTX05133.1;Name=UTX05133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010332949.1;locus_tag=NM058_20550;product=amino acid permease;protein_id=UTX05133.1;transl_table=11 CP101611.1 Genbank gene 4008318 4009079 . - . ID=gene-NM058_20555;Name=NM058_20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20555 CP101611.1 Protein Homology CDS 4008318 4009079 . - 0 ID=cds-UTX05134.1;Parent=gene-NM058_20555;Dbxref=NCBI_GP:UTX05134.1;Name=UTX05134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388192.2;locus_tag=NM058_20555;product=YqcI/YcgG family protein;protein_id=UTX05134.1;transl_table=11 CP101611.1 Genbank gene 4009149 4009778 . - . ID=gene-NM058_20560;Name=NM058_20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20560 CP101611.1 Protein Homology CDS 4009149 4009778 . - 0 ID=cds-UTX05135.1;Parent=gene-NM058_20560;Dbxref=NCBI_GP:UTX05135.1;Name=UTX05135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388191.1;locus_tag=NM058_20560;product=LysE family translocator;protein_id=UTX05135.1;transl_table=11 CP101611.1 Genbank gene 4009852 4010316 . - . ID=gene-NM058_20565;Name=NM058_20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20565 CP101611.1 Protein Homology CDS 4009852 4010316 . - 0 ID=cds-UTX05136.1;Parent=gene-NM058_20565;Dbxref=NCBI_GP:UTX05136.1;Name=UTX05136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388190.2;locus_tag=NM058_20565;product=MarR family transcriptional regulator;protein_id=UTX05136.1;transl_table=11 CP101611.1 Genbank gene 4010429 4011967 . + . ID=gene-NM058_20570;Name=bmr3;gbkey=Gene;gene=bmr3;gene_biotype=protein_coding;locus_tag=NM058_20570 CP101611.1 Protein Homology CDS 4010429 4011967 . + 0 ID=cds-UTX05137.1;Parent=gene-NM058_20570;Dbxref=NCBI_GP:UTX05137.1;Name=UTX05137.1;gbkey=CDS;gene=bmr3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388189.2;locus_tag=NM058_20570;product=multidrug efflux MFS transporter Bmr3;protein_id=UTX05137.1;transl_table=11 CP101611.1 Genbank pseudogene 4012008 4013632 . - . ID=gene-NM058_20575;Name=NM058_20575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20575;pseudo=true CP101611.1 Protein Homology CDS 4012008 4013632 . - 0 ID=cds-NM058_20575;Parent=gene-NM058_20575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388188.2;locus_tag=NM058_20575;product=L-lactate permease;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 4013664 4014628 . - . ID=gene-NM058_20580;Name=NM058_20580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20580;pseudo=true CP101611.1 Protein Homology CDS 4013664 4014628 . - 0 ID=cds-NM058_20580;Parent=gene-NM058_20580;Note=frameshifted;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388187.2;locus_tag=NM058_20580;product=L-lactate dehydrogenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4014803 4016782 . - . ID=gene-NM058_20585;Name=amyE;gbkey=Gene;gene=amyE;gene_biotype=protein_coding;locus_tag=NM058_20585 CP101611.1 Protein Homology CDS 4014803 4016782 . - 0 ID=cds-UTX05138.1;Parent=gene-NM058_20585;Dbxref=NCBI_GP:UTX05138.1;Name=UTX05138.1;gbkey=CDS;gene=amyE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388186.2;locus_tag=NM058_20585;product=alpha-amylase;protein_id=UTX05138.1;transl_table=11 CP101611.1 Genbank pseudogene 4017043 4017533 . - . ID=gene-NM058_20590;Name=NM058_20590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20590;pseudo=true CP101611.1 Protein Homology CDS 4017043 4017533 . - 0 ID=cds-NM058_20590;Parent=gene-NM058_20590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014662689.1;locus_tag=NM058_20590;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4017649 4019082 . - . ID=gene-NM058_20595;Name=NM058_20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20595 CP101611.1 Protein Homology CDS 4017649 4019082 . - 0 ID=cds-UTX05139.1;Parent=gene-NM058_20595;Dbxref=NCBI_GP:UTX05139.1;Name=UTX05139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388184.2;locus_tag=NM058_20595;product=YfcC family protein;protein_id=UTX05139.1;transl_table=11 CP101611.1 Genbank gene 4019231 4020382 . + . ID=gene-NM058_20600;Name=NM058_20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20600 CP101611.1 Protein Homology CDS 4019231 4020382 . + 0 ID=cds-UTX05140.1;Parent=gene-NM058_20600;Dbxref=NCBI_GP:UTX05140.1;Name=UTX05140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388183.2;locus_tag=NM058_20600;product=M20 peptidase aminoacylase family protein;protein_id=UTX05140.1;transl_table=11 CP101611.1 Genbank gene 4020422 4021303 . - . ID=gene-NM058_20605;Name=opuAC;gbkey=Gene;gene=opuAC;gene_biotype=protein_coding;locus_tag=NM058_20605 CP101611.1 Protein Homology CDS 4020422 4021303 . - 0 ID=cds-UTX05141.1;Parent=gene-NM058_20605;Dbxref=NCBI_GP:UTX05141.1;Name=UTX05141.1;gbkey=CDS;gene=opuAC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388182.1;locus_tag=NM058_20605;product=glycine/proline betaine ABC transporter substrate-binding protein OpuAC;protein_id=UTX05141.1;transl_table=11 CP101611.1 Genbank gene 4021303 4022151 . - . ID=gene-NM058_20610;Name=opuAB;gbkey=Gene;gene=opuAB;gene_biotype=protein_coding;locus_tag=NM058_20610 CP101611.1 Protein Homology CDS 4021303 4022151 . - 0 ID=cds-UTX05142.1;Parent=gene-NM058_20610;Dbxref=NCBI_GP:UTX05142.1;Name=UTX05142.1;gbkey=CDS;gene=opuAB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388181.1;locus_tag=NM058_20610;product=glycine/proline betaine ABC transporter permease subunit OpuAB;protein_id=UTX05142.1;transl_table=11 CP101611.1 Genbank gene 4022153 4023409 . - . ID=gene-NM058_20615;Name=opuAA;gbkey=Gene;gene=opuAA;gene_biotype=protein_coding;locus_tag=NM058_20615 CP101611.1 Protein Homology CDS 4022153 4023409 . - 0 ID=cds-UTX05143.1;Parent=gene-NM058_20615;Dbxref=NCBI_GP:UTX05143.1;Name=UTX05143.1;gbkey=CDS;gene=opuAA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388180.2;locus_tag=NM058_20615;product=glycine/proline betaine ABC transporter ATP-binding protein OpuAA;protein_id=UTX05143.1;transl_table=11 CP101611.1 Genbank gene 4023699 4024001 . + . ID=gene-NM058_20620;Name=NM058_20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20620 CP101611.1 Protein Homology CDS 4023699 4024001 . + 0 ID=cds-UTX05144.1;Parent=gene-NM058_20620;Dbxref=NCBI_GP:UTX05144.1;Name=UTX05144.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388179.1;locus_tag=NM058_20620;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=UTX05144.1;transl_table=11 CP101611.1 Genbank gene 4024070 4025236 . + . ID=gene-NM058_20625;Name=NM058_20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20625 CP101611.1 Protein Homology CDS 4024070 4025236 . + 0 ID=cds-UTX05145.1;Parent=gene-NM058_20625;Dbxref=NCBI_GP:UTX05145.1;Name=UTX05145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388178.1;locus_tag=NM058_20625;product=MFS transporter;protein_id=UTX05145.1;transl_table=11 CP101611.1 Genbank gene 4025266 4026468 . - . ID=gene-NM058_20630;Name=niaP;gbkey=Gene;gene=niaP;gene_biotype=protein_coding;locus_tag=NM058_20630 CP101611.1 Protein Homology CDS 4025266 4026468 . - 0 ID=cds-UTX05146.1;Parent=gene-NM058_20630;Dbxref=NCBI_GP:UTX05146.1;Name=UTX05146.1;gbkey=CDS;gene=niaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388177.1;locus_tag=NM058_20630;product=niacin permease NiaP;protein_id=UTX05146.1;transl_table=11 CP101611.1 Genbank gene 4026592 4027683 . - . ID=gene-NM058_20635;Name=NM058_20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20635 CP101611.1 Protein Homology CDS 4026592 4027683 . - 0 ID=cds-UTX05147.1;Parent=gene-NM058_20635;Dbxref=NCBI_GP:UTX05147.1;Name=UTX05147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388176.1;locus_tag=NM058_20635;product=toxic anion resistance protein;protein_id=UTX05147.1;transl_table=11 CP101611.1 Genbank gene 4027699 4029312 . - . ID=gene-NM058_20640;Name=NM058_20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20640 CP101611.1 Protein Homology CDS 4027699 4029312 . - 0 ID=cds-UTX07118.1;Parent=gene-NM058_20640;Dbxref=NCBI_GP:UTX07118.1;Name=UTX07118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388175.1;locus_tag=NM058_20640;product=YceG family protein;protein_id=UTX07118.1;transl_table=11 CP101611.1 Genbank gene 4029396 4030169 . - . ID=gene-NM058_20645;Name=NM058_20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20645 CP101611.1 Protein Homology CDS 4029396 4030169 . - 0 ID=cds-UTX05148.1;Parent=gene-NM058_20645;Dbxref=NCBI_GP:UTX05148.1;Name=UTX05148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388174.1;locus_tag=NM058_20645;product=TerC family protein;protein_id=UTX05148.1;transl_table=11 CP101611.1 Genbank gene 4030221 4030799 . - . ID=gene-NM058_20650;Name=NM058_20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20650 CP101611.1 Protein Homology CDS 4030221 4030799 . - 0 ID=cds-UTX05149.1;Parent=gene-NM058_20650;Dbxref=NCBI_GP:UTX05149.1;Name=UTX05149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388173.1;locus_tag=NM058_20650;product=TerD family protein;protein_id=UTX05149.1;transl_table=11 CP101611.1 Genbank gene 4030835 4031416 . - . ID=gene-NM058_20655;Name=NM058_20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20655 CP101611.1 Protein Homology CDS 4030835 4031416 . - 0 ID=cds-UTX05150.1;Parent=gene-NM058_20655;Dbxref=NCBI_GP:UTX05150.1;Name=UTX05150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388172.1;locus_tag=NM058_20655;product=TerD family protein;protein_id=UTX05150.1;transl_table=11 CP101611.1 Genbank gene 4031441 4032040 . - . ID=gene-NM058_20660;Name=NM058_20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20660 CP101611.1 Protein Homology CDS 4031441 4032040 . - 0 ID=cds-UTX05151.1;Parent=gene-NM058_20660;Dbxref=NCBI_GP:UTX05151.1;Name=UTX05151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015239102.1;locus_tag=NM058_20660;product=TerD family protein;protein_id=UTX05151.1;transl_table=11 CP101611.1 Genbank pseudogene 4032324 4033317 . + . ID=gene-NM058_20665;Name=NM058_20665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20665;pseudo=true CP101611.1 Protein Homology CDS 4032324 4033317 . + 0 ID=cds-NM058_20665;Parent=gene-NM058_20665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388170.2;locus_tag=NM058_20665;product=LLM class flavin-dependent oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4033354 4034196 . - . ID=gene-NM058_20670;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=NM058_20670 CP101611.1 Protein Homology CDS 4033354 4034196 . - 0 ID=cds-UTX05152.1;Parent=gene-NM058_20670;Dbxref=NCBI_GP:UTX05152.1;Name=UTX05152.1;gbkey=CDS;gene=znuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388169.1;locus_tag=NM058_20670;product=zinc ABC transporter permease ZnuB;protein_id=UTX05152.1;transl_table=11 CP101611.1 Genbank pseudogene 4034154 4034848 . - . ID=gene-NM058_20675;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=pseudogene;locus_tag=NM058_20675;pseudo=true CP101611.1 Protein Homology CDS 4034154 4034848 . - 0 ID=cds-NM058_20675;Parent=gene-NM058_20675;Note=frameshifted;gbkey=CDS;gene=znuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388168.1;locus_tag=NM058_20675;product=zinc ABC transporter ATP-binding protein ZnuC;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4034903 4035880 . - . ID=gene-NM058_20680;Name=NM058_20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20680 CP101611.1 Protein Homology CDS 4034903 4035880 . - 0 ID=cds-UTX05153.1;Parent=gene-NM058_20680;Dbxref=NCBI_GP:UTX05153.1;Name=UTX05153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388167.1;locus_tag=NM058_20680;product=metal ABC transporter substrate-binding protein;protein_id=UTX05153.1;transl_table=11 CP101611.1 Genbank gene 4036064 4037755 . - . ID=gene-NM058_20685;Name=NM058_20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20685 CP101611.1 Protein Homology CDS 4036064 4037755 . - 0 ID=cds-UTX05154.1;Parent=gene-NM058_20685;Dbxref=NCBI_GP:UTX05154.1;Name=UTX05154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003224748.1;locus_tag=NM058_20685;product=alpha-glucosidase;protein_id=UTX05154.1;transl_table=11 CP101611.1 Genbank pseudogene 4037780 4038555 . - . ID=gene-NM058_20690;Name=NM058_20690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20690;pseudo=true CP101611.1 Protein Homology CDS 4037780 4038555 . - 0 ID=cds-NM058_20690;Parent=gene-NM058_20690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388165.1;locus_tag=NM058_20690;product=SDR family oxidoreductase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4038663 4039784 . - . ID=gene-NM058_20695;Name=rapJ;gbkey=Gene;gene=rapJ;gene_biotype=protein_coding;locus_tag=NM058_20695 CP101611.1 Protein Homology CDS 4038663 4039784 . - 0 ID=cds-UTX05155.1;Parent=gene-NM058_20695;Dbxref=NCBI_GP:UTX05155.1;Name=UTX05155.1;gbkey=CDS;gene=rapJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388164.1;locus_tag=NM058_20695;product=response regulator aspartate phosphatase RapJ;protein_id=UTX05155.1;transl_table=11 CP101611.1 Genbank pseudogene 4039907 4040409 . + . ID=gene-NM058_20700;Name=cwlK;gbkey=Gene;gene=cwlK;gene_biotype=pseudogene;locus_tag=NM058_20700;pseudo=true CP101611.1 Protein Homology CDS 4039907 4040409 . + 0 ID=cds-NM058_20700;Parent=gene-NM058_20700;Note=frameshifted;gbkey=CDS;gene=cwlK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388163.1;locus_tag=NM058_20700;product=peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4040416 4041777 . - . ID=gene-NM058_20705;Name=NM058_20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20705 CP101611.1 Protein Homology CDS 4040416 4041777 . - 0 ID=cds-UTX05156.1;Parent=gene-NM058_20705;Dbxref=NCBI_GP:UTX05156.1;Name=UTX05156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388162.1;locus_tag=NM058_20705;product=DUF4901 domain-containing protein;protein_id=UTX05156.1;transl_table=11 CP101611.1 Genbank pseudogene 4041963 4043376 . - . ID=gene-NM058_20710;Name=NM058_20710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20710;pseudo=true CP101611.1 Protein Homology CDS 4041963 4043376 . - 0 ID=cds-NM058_20710;Parent=gene-NM058_20710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388161.1;locus_tag=NM058_20710;product=DUF4901 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4043550 4043657 . + . ID=gene-NM058_20715;Name=NM058_20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20715 CP101611.1 Protein Homology CDS 4043550 4043657 . + 0 ID=cds-UTX05157.1;Parent=gene-NM058_20715;Dbxref=NCBI_GP:UTX05157.1;Name=UTX05157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513941.1;locus_tag=NM058_20715;product=hypothetical protein;protein_id=UTX05157.1;transl_table=11 CP101611.1 Genbank gene 4043703 4044767 . + . ID=gene-NM058_20720;Name=NM058_20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20720 CP101611.1 Protein Homology CDS 4043703 4044767 . + 0 ID=cds-UTX05158.1;Parent=gene-NM058_20720;Dbxref=NCBI_GP:UTX05158.1;Name=UTX05158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388160.1;locus_tag=NM058_20720;product=DUF4352 domain-containing protein;protein_id=UTX05158.1;transl_table=11 CP101611.1 Genbank gene 4044807 4045739 . - . ID=gene-NM058_20725;Name=NM058_20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20725 CP101611.1 Protein Homology CDS 4044807 4045739 . - 0 ID=cds-UTX05159.1;Parent=gene-NM058_20725;Dbxref=NCBI_GP:UTX05159.1;Name=UTX05159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014112547.1;locus_tag=NM058_20725;product=aldo/keto reductase;protein_id=UTX05159.1;transl_table=11 CP101611.1 Genbank gene 4045875 4047035 . - . ID=gene-NM058_20730;Name=natB;gbkey=Gene;gene=natB;gene_biotype=protein_coding;locus_tag=NM058_20730 CP101611.1 Protein Homology CDS 4045875 4047035 . - 0 ID=cds-UTX05160.1;Parent=gene-NM058_20730;Dbxref=NCBI_GP:UTX05160.1;Name=UTX05160.1;gbkey=CDS;gene=natB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388158.1;locus_tag=NM058_20730;product=sodium ABC transporter permease NatB;protein_id=UTX05160.1;transl_table=11 CP101611.1 Genbank gene 4047036 4047776 . - . ID=gene-NM058_20735;Name=natA;gbkey=Gene;gene=natA;gene_biotype=protein_coding;locus_tag=NM058_20735 CP101611.1 Protein Homology CDS 4047036 4047776 . - 0 ID=cds-UTX05161.1;Parent=gene-NM058_20735;Dbxref=NCBI_GP:UTX05161.1;Name=UTX05161.1;gbkey=CDS;gene=natA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388157.1;locus_tag=NM058_20735;product=sodium ABC transporter ATP-binding protein NatA;protein_id=UTX05161.1;transl_table=11 CP101611.1 Genbank gene 4047920 4048621 . + . ID=gene-NM058_20740;Name=natR;gbkey=Gene;gene=natR;gene_biotype=protein_coding;locus_tag=NM058_20740 CP101611.1 Protein Homology CDS 4047920 4048621 . + 0 ID=cds-UTX05162.1;Parent=gene-NM058_20740;Dbxref=NCBI_GP:UTX05162.1;Name=UTX05162.1;gbkey=CDS;gene=natR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388156.1;locus_tag=NM058_20740;product=two-component system response regulator NatR;protein_id=UTX05162.1;transl_table=11 CP101611.1 Genbank gene 4048634 4049587 . + . ID=gene-NM058_20745;Name=NM058_20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20745 CP101611.1 Protein Homology CDS 4048634 4049587 . + 0 ID=cds-UTX05163.1;Parent=gene-NM058_20745;Dbxref=NCBI_GP:UTX05163.1;Name=UTX05163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388155.1;locus_tag=NM058_20745;product=GHKL domain-containing protein;protein_id=UTX05163.1;transl_table=11 CP101611.1 Genbank gene 4049627 4050706 . - . ID=gene-NM058_20750;Name=NM058_20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20750 CP101611.1 Protein Homology CDS 4049627 4050706 . - 0 ID=cds-UTX05164.1;Parent=gene-NM058_20750;Dbxref=NCBI_GP:UTX05164.1;Name=UTX05164.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388154.1;locus_tag=NM058_20750;product=SEC-C metal-binding domain-containing protein;protein_id=UTX05164.1;transl_table=11 CP101611.1 Genbank gene 4050940 4051323 . + . ID=gene-NM058_20755;Name=NM058_20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20755 CP101611.1 Protein Homology CDS 4050940 4051323 . + 0 ID=cds-UTX07119.1;Parent=gene-NM058_20755;Dbxref=NCBI_GP:UTX07119.1;Name=UTX07119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388153.1;locus_tag=NM058_20755;product=RDD family protein;protein_id=UTX07119.1;transl_table=11 CP101611.1 Genbank gene 4051361 4051999 . - . ID=gene-NM058_20760;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=NM058_20760 CP101611.1 Protein Homology CDS 4051361 4051999 . - 0 ID=cds-UTX05165.1;Parent=gene-NM058_20760;Dbxref=NCBI_GP:UTX05165.1;Name=UTX05165.1;gbkey=CDS;gene=lipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388152.1;locus_tag=NM058_20760;product=lipase LipA;protein_id=UTX05165.1;transl_table=11 CP101611.1 Genbank pseudogene 4052171 4053303 . - . ID=gene-NM058_20765;Name=NM058_20765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20765;pseudo=true CP101611.1 Protein Homology CDS 4052171 4053303 . - 0 ID=cds-NM058_20765;Parent=gene-NM058_20765;Note=frameshifted;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388151.1;locus_tag=NM058_20765;product=type II asparaginase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4053522 4054088 . + . ID=gene-NM058_20770;Name=NM058_20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20770 CP101611.1 Protein Homology CDS 4053522 4054088 . + 0 ID=cds-UTX05166.1;Parent=gene-NM058_20770;Dbxref=NCBI_GP:UTX05166.1;Name=UTX05166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388150.1;locus_tag=NM058_20770;product=TetR/AcrR family transcriptional regulator;protein_id=UTX05166.1;transl_table=11 CP101611.1 Genbank gene 4054143 4055582 . + . ID=gene-NM058_20775;Name=lmr(B);gbkey=Gene;gene=lmr(B);gene_biotype=protein_coding;locus_tag=NM058_20775 CP101611.1 Protein Homology CDS 4054143 4055582 . + 0 ID=cds-UTX07120.1;Parent=gene-NM058_20775;Dbxref=NCBI_GP:UTX07120.1;Name=UTX07120.1;gbkey=CDS;gene=lmr(B);inference=COORDINATES: similar to AA sequence:RefSeq:WP_010886396.1;locus_tag=NM058_20775;product=lincomycin efflux MFS transporter Lmr(B);protein_id=UTX07120.1;transl_table=11 CP101611.1 Genbank gene 4055625 4056737 . - . ID=gene-NM058_20780;Name=NM058_20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20780 CP101611.1 Protein Homology CDS 4055625 4056737 . - 0 ID=cds-UTX05167.1;Parent=gene-NM058_20780;Dbxref=NCBI_GP:UTX05167.1;Name=UTX05167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003223839.1;locus_tag=NM058_20780;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=UTX05167.1;transl_table=11 CP101611.1 Genbank gene 4056818 4057465 . + . ID=gene-NM058_20785;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=NM058_20785 CP101611.1 Protein Homology CDS 4056818 4057465 . + 0 ID=cds-UTX05168.1;Parent=gene-NM058_20785;Dbxref=NCBI_GP:UTX05168.1;Name=UTX05168.1;Ontology_term=GO:0030163;gbkey=CDS;gene=pcp;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388147.1;locus_tag=NM058_20785;product=pyroglutamyl-peptidase I;protein_id=UTX05168.1;transl_table=11 CP101611.1 Genbank gene 4057462 4058187 . - . ID=gene-NM058_20790;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=NM058_20790 CP101611.1 Protein Homology CDS 4057462 4058187 . - 0 ID=cds-UTX05169.1;Parent=gene-NM058_20790;Dbxref=NCBI_GP:UTX05169.1;Name=UTX05169.1;Ontology_term=GO:0015628,GO:0005887;gbkey=CDS;gene=tatC;go_component=integral component of plasma membrane|0005887||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014112534.1;locus_tag=NM058_20790;product=twin-arginine translocase subunit TatC;protein_id=UTX05169.1;transl_table=11 CP101611.1 Genbank gene 4058248 4058460 . - . ID=gene-NM058_20795;Name=tatAD;gbkey=Gene;gene=tatAD;gene_biotype=protein_coding;locus_tag=NM058_20795 CP101611.1 Protein Homology CDS 4058248 4058460 . - 0 ID=cds-UTX05170.1;Parent=gene-NM058_20795;Dbxref=NCBI_GP:UTX05170.1;Name=UTX05170.1;gbkey=CDS;gene=tatAD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388145.2;locus_tag=NM058_20795;product=sec-independent protein translocase protein TatAD;protein_id=UTX05170.1;transl_table=11 CP101611.1 Genbank gene 4058474 4060225 . - . ID=gene-NM058_20800;Name=phoD;gbkey=Gene;gene=phoD;gene_biotype=protein_coding;locus_tag=NM058_20800 CP101611.1 Protein Homology CDS 4058474 4060225 . - 0 ID=cds-UTX05171.1;Parent=gene-NM058_20800;Dbxref=NCBI_GP:UTX05171.1;Name=UTX05171.1;gbkey=CDS;gene=phoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388144.2;locus_tag=NM058_20800;product=alkaline phosphatase PhoD;protein_id=UTX05171.1;transl_table=11 CP101611.1 Genbank pseudogene 4060244 4060420 . - . ID=gene-NM058_20805;Name=NM058_20805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20805;pseudo=true CP101611.1 Protein Homology CDS 4060244 4060420 . - 0 ID=cds-NM058_20805;Parent=gene-NM058_20805;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097673.1;locus_tag=NM058_20805;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4060497 4061228 . - . ID=gene-NM058_20810;Name=NM058_20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20810 CP101611.1 Protein Homology CDS 4060497 4061228 . - 0 ID=cds-UTX05172.1;Parent=gene-NM058_20810;Dbxref=NCBI_GP:UTX05172.1;Name=UTX05172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388143.2;locus_tag=NM058_20810;product=VWA domain-containing protein;protein_id=UTX05172.1;transl_table=11 CP101611.1 Genbank gene 4061312 4061740 . - . ID=gene-NM058_20815;Name=NM058_20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20815 CP101611.1 Protein Homology CDS 4061312 4061740 . - 0 ID=cds-UTX05173.1;Parent=gene-NM058_20815;Dbxref=NCBI_GP:UTX05173.1;Name=UTX05173.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388142.2;locus_tag=NM058_20815;product=cell wall hydrolase;protein_id=UTX05173.1;transl_table=11 CP101611.1 Genbank gene 4061823 4063061 . - . ID=gene-NM058_20820;Name=NM058_20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20820 CP101611.1 Protein Homology CDS 4061823 4063061 . - 0 ID=cds-UTX05174.1;Parent=gene-NM058_20820;Dbxref=NCBI_GP:UTX05174.1;Name=UTX05174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003223825.1;locus_tag=NM058_20820;product=serpin family protein;protein_id=UTX05174.1;transl_table=11 CP101611.1 Genbank gene 4063174 4063560 . + . ID=gene-NM058_20825;Name=NM058_20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20825 CP101611.1 Protein Homology CDS 4063174 4063560 . + 0 ID=cds-UTX05175.1;Parent=gene-NM058_20825;Dbxref=NCBI_GP:UTX05175.1;Name=UTX05175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388141.1;locus_tag=NM058_20825;product=YndM family protein;protein_id=UTX05175.1;transl_table=11 CP101611.1 Genbank pseudogene 4063520 4063652 . + . ID=gene-NM058_20830;Name=NM058_20830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20830;pseudo=true CP101611.1 Protein Homology CDS 4063520 4063652 . + 0 ID=cds-NM058_20830;Parent=gene-NM058_20830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009513940.1;locus_tag=NM058_20830;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4063613 4064299 . - . ID=gene-NM058_20835;Name=NM058_20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20835 CP101611.1 Protein Homology CDS 4063613 4064299 . - 0 ID=cds-UTX05176.1;Parent=gene-NM058_20835;Dbxref=NCBI_GP:UTX05176.1;Name=UTX05176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388140.3;locus_tag=NM058_20835;product=ABC transporter permease;protein_id=UTX05176.1;transl_table=11 CP101611.1 Genbank gene 4064318 4065241 . - . ID=gene-NM058_20840;Name=NM058_20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20840 CP101611.1 Protein Homology CDS 4064318 4065241 . - 0 ID=cds-UTX05177.1;Parent=gene-NM058_20840;Dbxref=NCBI_GP:UTX05177.1;Name=UTX05177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388139.2;locus_tag=NM058_20840;product=ABC transporter ATP-binding protein;protein_id=UTX05177.1;transl_table=11 CP101611.1 Genbank gene 4065336 4066271 . - . ID=gene-NM058_20845;Name=NM058_20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20845 CP101611.1 Protein Homology CDS 4065336 4066271 . - 0 ID=cds-UTX05178.1;Parent=gene-NM058_20845;Dbxref=NCBI_GP:UTX05178.1;Name=UTX05178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388138.2;locus_tag=NM058_20845;product=HAMP domain-containing histidine kinase;protein_id=UTX05178.1;transl_table=11 CP101611.1 Genbank gene 4066273 4066953 . - . ID=gene-NM058_20850;Name=ycbL;gbkey=Gene;gene=ycbL;gene_biotype=protein_coding;locus_tag=NM058_20850 CP101611.1 Protein Homology CDS 4066273 4066953 . - 0 ID=cds-UTX07121.1;Parent=gene-NM058_20850;Dbxref=NCBI_GP:UTX07121.1;Name=UTX07121.1;gbkey=CDS;gene=ycbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388137.2;locus_tag=NM058_20850;product=two-component system response regulator YcbL;protein_id=UTX07121.1;transl_table=11 CP101611.1 Genbank pseudogene 4067050 4067981 . - . ID=gene-NM058_20855;Name=NM058_20855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20855;pseudo=true CP101611.1 Protein Homology CDS 4067050 4067981 . - 0 ID=cds-NM058_20855;Parent=gene-NM058_20855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388136.1;locus_tag=NM058_20855;product=DMT family transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4068002 4068163 . - . ID=gene-NM058_20860;Name=NM058_20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20860 CP101611.1 Protein Homology CDS 4068002 4068163 . - 0 ID=cds-UTX05179.1;Parent=gene-NM058_20860;Dbxref=NCBI_GP:UTX05179.1;Name=UTX05179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388135.1;locus_tag=NM058_20860;product=tryptophan RNA-binding attenuation protein;protein_id=UTX05179.1;transl_table=11 CP101611.1 cmsearch binding_site 4068257 4068503 . - . ID=id-CP101611.1:4068257..4068503;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 CP101611.1 Genbank gene 4068560 4069480 . - . ID=gene-NM058_20865;Name=mphK;gbkey=Gene;gene=mphK;gene_biotype=protein_coding;gene_synonym=ycbJ;locus_tag=NM058_20865 CP101611.1 Protein Homology CDS 4068560 4069480 . - 0 ID=cds-UTX05180.1;Parent=gene-NM058_20865;Dbxref=NCBI_GP:UTX05180.1;Name=UTX05180.1;gbkey=CDS;gene=mphK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388134.1;locus_tag=NM058_20865;product=macrolide 2'-phosphotransferase MphK;protein_id=UTX05180.1;transl_table=11 CP101611.1 Genbank pseudogene 4069756 4071287 . - . ID=gene-NM058_20870;Name=garD;gbkey=Gene;gene=garD;gene_biotype=pseudogene;locus_tag=NM058_20870;pseudo=true CP101611.1 Protein Homology CDS 4069756 4071287 . - 0 ID=cds-NM058_20870;Parent=gene-NM058_20870;Note=frameshifted;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388133.2;locus_tag=NM058_20870;product=galactarate dehydratase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4071381 4072082 . - . ID=gene-NM058_20875;Name=NM058_20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20875 CP101611.1 Protein Homology CDS 4071381 4072082 . - 0 ID=cds-UTX05181.1;Parent=gene-NM058_20875;Dbxref=NCBI_GP:UTX05181.1;Name=UTX05181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388132.2;locus_tag=NM058_20875;product=FadR family transcriptional regulator;protein_id=UTX05181.1;transl_table=11 CP101611.1 Genbank pseudogene 4072152 4073518 . - . ID=gene-NM058_20880;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=pseudogene;locus_tag=NM058_20880;pseudo=true CP101611.1 Protein Homology CDS 4072152 4073518 . - 0 ID=cds-NM058_20880;Parent=gene-NM058_20880;Note=frameshifted;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388131.2;locus_tag=NM058_20880;product=glucarate dehydratase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4073555 4074922 . - . ID=gene-NM058_20885;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=NM058_20885 CP101611.1 Protein Homology CDS 4073555 4074922 . - 0 ID=cds-UTX05182.1;Parent=gene-NM058_20885;Dbxref=NCBI_GP:UTX05182.1;Name=UTX05182.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388130.2;locus_tag=NM058_20885;product=glucarate transporter GudP;protein_id=UTX05182.1;transl_table=11 CP101611.1 Genbank gene 4075007 4076473 . - . ID=gene-NM058_20890;Name=NM058_20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20890 CP101611.1 Protein Homology CDS 4075007 4076473 . - 0 ID=cds-UTX05183.1;Parent=gene-NM058_20890;Dbxref=NCBI_GP:UTX05183.1;Name=UTX05183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388129.1;locus_tag=NM058_20890;product=aldehyde dehydrogenase family protein;protein_id=UTX05183.1;transl_table=11 CP101611.1 Genbank gene 4076506 4077432 . - . ID=gene-NM058_20895;Name=kdgD;gbkey=Gene;gene=kdgD;gene_biotype=protein_coding;locus_tag=NM058_20895 CP101611.1 Protein Homology CDS 4076506 4077432 . - 0 ID=cds-UTX05184.1;Parent=gene-NM058_20895;Dbxref=NCBI_GP:UTX05184.1;Name=UTX05184.1;Ontology_term=GO:0047448;gbkey=CDS;gene=kdgD;go_function=5-dehydro-4-deoxyglucarate dehydratase activity|0047448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388128.2;locus_tag=NM058_20895;product=5-dehydro-4-deoxyglucarate dehydratase;protein_id=UTX05184.1;transl_table=11 CP101611.1 Genbank pseudogene 4077658 4078601 . - . ID=gene-NM058_20900;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=pseudogene;locus_tag=NM058_20900;pseudo=true CP101611.1 Protein Homology CDS 4077658 4078601 . - 0 ID=cds-NM058_20900;Parent=gene-NM058_20900;Note=frameshifted;gbkey=CDS;gene=glnL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388127.1;locus_tag=NM058_20900;product=glutamine utilization two-component system response regulator GlnL;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 4078612 4079840 . - . ID=gene-NM058_20905;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=pseudogene;locus_tag=NM058_20905;pseudo=true CP101611.1 Protein Homology CDS 4078612 4079840 . - 0 ID=cds-NM058_20905;Parent=gene-NM058_20905;Note=frameshifted;gbkey=CDS;gene=glnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388126.2;locus_tag=NM058_20905;product=two-component system sensor histidine kinase GlnK;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4080141 4081124 . + . ID=gene-NM058_20910;Name=NM058_20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20910 CP101611.1 Protein Homology CDS 4080141 4081124 . + 0 ID=cds-UTX05185.1;Parent=gene-NM058_20910;Dbxref=NCBI_GP:UTX05185.1;Name=UTX05185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388125.1;locus_tag=NM058_20910;product=glutaminase;protein_id=UTX05185.1;transl_table=11 CP101611.1 Genbank gene 4081147 4082583 . + . ID=gene-NM058_20915;Name=NM058_20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20915 CP101611.1 Protein Homology CDS 4081147 4082583 . + 0 ID=cds-UTX05186.1;Parent=gene-NM058_20915;Dbxref=NCBI_GP:UTX05186.1;Name=UTX05186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388124.2;locus_tag=NM058_20915;product=alanine:cation symporter family protein;protein_id=UTX05186.1;transl_table=11 CP101611.1 Genbank pseudogene 4082711 4083656 . + . ID=gene-NM058_20920;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=pseudogene;locus_tag=NM058_20920;pseudo=true CP101611.1 Protein Homology CDS 4082711 4083656 . + 0 ID=cds-NM058_20920;Parent=gene-NM058_20920;Note=frameshifted;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388123.1;locus_tag=NM058_20920;product=homocysteine S-methyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4083777 4085189 . + . ID=gene-NM058_20925;Name=mmuP;gbkey=Gene;gene=mmuP;gene_biotype=protein_coding;locus_tag=NM058_20925 CP101611.1 Protein Homology CDS 4083777 4085189 . + 0 ID=cds-UTX05187.1;Parent=gene-NM058_20925;Dbxref=NCBI_GP:UTX05187.1;Name=UTX05187.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mmuP;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388122.1;locus_tag=NM058_20925;product=S-methylmethionine permease;protein_id=UTX05187.1;transl_table=11 CP101611.1 Genbank gene 4085225 4086292 . - . ID=gene-NM058_20930;Name=NM058_20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20930 CP101611.1 Protein Homology CDS 4085225 4086292 . - 0 ID=cds-UTX07122.1;Parent=gene-NM058_20930;Dbxref=NCBI_GP:UTX07122.1;Name=UTX07122.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388121.1;locus_tag=NM058_20930;product=branched-chain amino acid aminotransferase;protein_id=UTX07122.1;transl_table=11 CP101611.1 Genbank gene 4086505 4086780 . - . ID=gene-NM058_20935;Name=NM058_20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20935 CP101611.1 Protein Homology CDS 4086505 4086780 . - 0 ID=cds-UTX05188.1;Parent=gene-NM058_20935;Dbxref=NCBI_GP:UTX05188.1;Name=UTX05188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388120.1;locus_tag=NM058_20935;product=DUF1648 domain-containing protein;protein_id=UTX05188.1;transl_table=11 CP101611.1 Genbank gene 4086814 4087521 . - . ID=gene-NM058_20940;Name=gamR;gbkey=Gene;gene=gamR;gene_biotype=protein_coding;locus_tag=NM058_20940 CP101611.1 Protein Homology CDS 4086814 4087521 . - 0 ID=cds-UTX05189.1;Parent=gene-NM058_20940;Dbxref=NCBI_GP:UTX05189.1;Name=UTX05189.1;gbkey=CDS;gene=gamR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388119.1;locus_tag=NM058_20940;product=transcriptional regulator GamR;protein_id=UTX05189.1;transl_table=11 CP101611.1 Genbank pseudogene 4087740 4088488 . + . ID=gene-NM058_20945;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=pseudogene;locus_tag=NM058_20945;pseudo=true CP101611.1 Protein Homology CDS 4087740 4088488 . + 0 ID=cds-NM058_20945;Parent=gene-NM058_20945;Note=frameshifted;Ontology_term=GO:0006046,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine catabolic process|0006046||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003241367.1;locus_tag=NM058_20945;product=glucosamine-6-phosphate deaminase;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 4088500 4090393 . + . ID=gene-NM058_20950;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=pseudogene;locus_tag=NM058_20950;pseudo=true CP101611.1 Protein Homology CDS 4088500 4090393 . + 0 ID=cds-NM058_20950;Parent=gene-NM058_20950;Note=frameshifted;Ontology_term=GO:0005355;gbkey=CDS;gene=ptsG;go_function=glucose transmembrane transporter activity|0005355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388117.1;locus_tag=NM058_20950;product=glucose-specific PTS transporter subunit IIBC;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4090537 4091781 . + . ID=gene-NM058_20955;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=NM058_20955 CP101611.1 Protein Homology CDS 4090537 4091781 . + 0 ID=cds-UTX05190.1;Parent=gene-NM058_20955;Dbxref=NCBI_GP:UTX05190.1;Name=UTX05190.1;gbkey=CDS;gene=gltP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388116.1;locus_tag=NM058_20955;product=glutamate-aspartate/proton symporter GltP;protein_id=UTX05190.1;transl_table=11 CP101611.1 Genbank pseudogene 4091818 4092785 . - . ID=gene-NM058_20960;Name=NM058_20960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_20960;pseudo=true CP101611.1 Protein Homology CDS 4091818 4092785 . - 0 ID=cds-NM058_20960;Parent=gene-NM058_20960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388115.1;locus_tag=NM058_20960;product=rhodanese-related sulfurtransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4092985 4093872 . - . ID=gene-NM058_20965;Name=NM058_20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20965 CP101611.1 Protein Homology CDS 4092985 4093872 . - 0 ID=cds-UTX05191.1;Parent=gene-NM058_20965;Dbxref=NCBI_GP:UTX05191.1;Name=UTX05191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388114.1;locus_tag=NM058_20965;product=AraC family transcriptional regulator;protein_id=UTX05191.1;transl_table=11 CP101611.1 Genbank gene 4093982 4095310 . - . ID=gene-NM058_20970;Name=NM058_20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20970 CP101611.1 Protein Homology CDS 4093982 4095310 . - 0 ID=cds-UTX07123.1;Parent=gene-NM058_20970;Dbxref=NCBI_GP:UTX07123.1;Name=UTX07123.1;Ontology_term=GO:0046677;gbkey=CDS;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: protein motif:HMM:NF016994.2;locus_tag=NM058_20970;product=erythromycin esterase family protein;protein_id=UTX07123.1;transl_table=11 CP101611.1 Genbank gene 4095424 4095702 . - . ID=gene-NM058_20975;Name=NM058_20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20975 CP101611.1 Protein Homology CDS 4095424 4095702 . - 0 ID=cds-UTX05192.1;Parent=gene-NM058_20975;Dbxref=NCBI_GP:UTX05192.1;Name=UTX05192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003223765.1;locus_tag=NM058_20975;product=hypothetical protein;protein_id=UTX05192.1;transl_table=11 CP101611.1 Genbank gene 4095757 4096548 . - . ID=gene-NM058_20980;Name=NM058_20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20980 CP101611.1 Protein Homology CDS 4095757 4096548 . - 0 ID=cds-UTX05193.1;Parent=gene-NM058_20980;Dbxref=NCBI_GP:UTX05193.1;Name=UTX05193.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388111.1;locus_tag=NM058_20980;product=phosphatidylserine decarboxylase;protein_id=UTX05193.1;transl_table=11 CP101611.1 Genbank gene 4096541 4097029 . - . ID=gene-NM058_20985;Name=NM058_20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20985 CP101611.1 Protein Homology CDS 4096541 4097029 . - 0 ID=cds-UTX05194.1;Parent=gene-NM058_20985;Dbxref=NCBI_GP:UTX05194.1;Name=UTX05194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388110.1;locus_tag=NM058_20985;product=DedA family protein;protein_id=UTX05194.1;transl_table=11 CP101611.1 Genbank gene 4097020 4097553 . - . ID=gene-NM058_20990;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=NM058_20990 CP101611.1 Protein Homology CDS 4097020 4097553 . - 0 ID=cds-UTX05195.1;Parent=gene-NM058_20990;Dbxref=NCBI_GP:UTX05195.1;Name=UTX05195.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388109.1;locus_tag=NM058_20990;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=UTX05195.1;transl_table=11 CP101611.1 Genbank gene 4097750 4098634 . - . ID=gene-NM058_20995;Name=NM058_20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_20995 CP101611.1 Protein Homology CDS 4097750 4098634 . - 0 ID=cds-UTX05196.1;Parent=gene-NM058_20995;Dbxref=NCBI_GP:UTX05196.1;Name=UTX05196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003223755.1;locus_tag=NM058_20995;product=alpha/beta hydrolase;protein_id=UTX05196.1;transl_table=11 CP101611.1 Genbank gene 4098807 4099205 . - . ID=gene-NM058_21000;Name=NM058_21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21000 CP101611.1 Protein Homology CDS 4098807 4099205 . - 0 ID=cds-UTX05197.1;Parent=gene-NM058_21000;Dbxref=NCBI_GP:UTX05197.1;Name=UTX05197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388107.1;locus_tag=NM058_21000;product=YbfJ family protein;protein_id=UTX05197.1;transl_table=11 CP101611.1 Genbank gene 4099168 4100106 . - . ID=gene-NM058_21005;Name=mpr;gbkey=Gene;gene=mpr;gene_biotype=protein_coding;locus_tag=NM058_21005 CP101611.1 Protein Homology CDS 4099168 4100106 . - 0 ID=cds-UTX05198.1;Parent=gene-NM058_21005;Dbxref=NCBI_GP:UTX05198.1;Name=UTX05198.1;gbkey=CDS;gene=mpr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388106.1;locus_tag=NM058_21005;product=extracellular metalloprotease Mpr;protein_id=UTX05198.1;transl_table=11 CP101611.1 Genbank gene 4100248 4101402 . - . ID=gene-NM058_21010;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=NM058_21010 CP101611.1 Protein Homology CDS 4100248 4101402 . - 0 ID=cds-UTX05199.1;Parent=gene-NM058_21010;Dbxref=NCBI_GP:UTX05199.1;Name=UTX05199.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purT;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388105.1;locus_tag=NM058_21010;product=phosphoribosylglycinamide formyltransferase 2;protein_id=UTX05199.1;transl_table=11 CP101611.1 Genbank gene 4101693 4102520 . + . ID=gene-NM058_21015;Name=NM058_21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21015 CP101611.1 Protein Homology CDS 4101693 4102520 . + 0 ID=cds-UTX05200.1;Parent=gene-NM058_21015;Dbxref=NCBI_GP:UTX05200.1;Name=UTX05200.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388104.1;locus_tag=NM058_21015;product=AraC family ligand binding domain-containing protein;protein_id=UTX05200.1;transl_table=11 CP101611.1 Genbank gene 4102517 4103437 . + . ID=gene-NM058_21020;Name=NM058_21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21020 CP101611.1 Protein Homology CDS 4102517 4103437 . + 0 ID=cds-UTX05201.1;Parent=gene-NM058_21020;Dbxref=NCBI_GP:UTX05201.1;Name=UTX05201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388103.1;locus_tag=NM058_21020;product=DMT family transporter;protein_id=UTX05201.1;transl_table=11 CP101611.1 Genbank pseudogene 4103446 4103876 . + . ID=gene-NM058_21025;Name=NM058_21025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_21025;pseudo=true CP101611.1 Protein Homology CDS 4103446 4103876 . + 0 ID=cds-NM058_21025;Parent=gene-NM058_21025;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694976.1;locus_tag=NM058_21025;product=hypothetical protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4103946 4104371 . + . ID=gene-NM058_21030;Name=NM058_21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21030 CP101611.1 Protein Homology CDS 4103946 4104371 . + 0 ID=cds-UTX05202.1;Parent=gene-NM058_21030;Dbxref=NCBI_GP:UTX05202.1;Name=UTX05202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694975.1;locus_tag=NM058_21030;product=hypothetical protein;protein_id=UTX05202.1;transl_table=11 CP101611.1 Genbank gene 4104405 4105658 . - . ID=gene-NM058_21035;Name=NM058_21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21035 CP101611.1 Protein Homology CDS 4104405 4105658 . - 0 ID=cds-UTX07124.1;Parent=gene-NM058_21035;Dbxref=NCBI_GP:UTX07124.1;Name=UTX07124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003223740.1;locus_tag=NM058_21035;product=MFS transporter;protein_id=UTX07124.1;transl_table=11 CP101611.1 Genbank gene 4105655 4106572 . - . ID=gene-NM058_21040;Name=NM058_21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21040 CP101611.1 Protein Homology CDS 4105655 4106572 . - 0 ID=cds-UTX05203.1;Parent=gene-NM058_21040;Dbxref=NCBI_GP:UTX05203.1;Name=UTX05203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388098.1;locus_tag=NM058_21040;product=helix-turn-helix domain-containing GNAT family N-acetyltransferase;protein_id=UTX05203.1;transl_table=11 CP101611.1 Genbank gene 4106664 4106912 . - . ID=gene-NM058_21045;Name=NM058_21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21045 CP101611.1 Protein Homology CDS 4106664 4106912 . - 0 ID=cds-UTX05204.1;Parent=gene-NM058_21045;Dbxref=NCBI_GP:UTX05204.1;Name=UTX05204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019713173.1;locus_tag=NM058_21045;product=YbeF family protein;protein_id=UTX05204.1;transl_table=11 CP101611.1 Genbank pseudogene 4107196 4108529 . + . ID=gene-NM058_21050;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=pseudogene;locus_tag=NM058_21050;pseudo=true CP101611.1 Protein Homology CDS 4107196 4108529 . + 0 ID=cds-NM058_21050;Parent=gene-NM058_21050;Note=frameshifted;Ontology_term=GO:0015794,GO:0015169;gbkey=CDS;gene=glpT;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388096.1;locus_tag=NM058_21050;product=glycerol-3-phosphate transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4108628 4109518 . + . ID=gene-NM058_21055;Name=NM058_21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21055 CP101611.1 Protein Homology CDS 4108628 4109518 . + 0 ID=cds-UTX05205.1;Parent=gene-NM058_21055;Dbxref=NCBI_GP:UTX05205.1;Name=UTX05205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014112478.1;locus_tag=NM058_21055;product=glycerophosphodiester phosphodiesterase;protein_id=UTX05205.1;transl_table=11 CP101611.1 Genbank gene 4109543 4111171 . - . ID=gene-NM058_21060;Name=NM058_21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21060 CP101611.1 Protein Homology CDS 4109543 4111171 . - 0 ID=cds-UTX05206.1;Parent=gene-NM058_21060;Dbxref=NCBI_GP:UTX05206.1;Name=UTX05206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003241407.1;locus_tag=NM058_21060;product=Na/Pi cotransporter family protein;protein_id=UTX05206.1;transl_table=11 CP101611.1 Genbank pseudogene 4111400 4113001 . - . ID=gene-NM058_21065;Name=NM058_21065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_21065;pseudo=true CP101611.1 Protein Homology CDS 4111400 4113001 . - 0 ID=cds-NM058_21065;Parent=gene-NM058_21065;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388094.2;locus_tag=NM058_21065;product=APC family permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4113270 4113530 . + . ID=gene-NM058_21070;Name=NM058_21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21070 CP101611.1 Protein Homology CDS 4113270 4113530 . + 0 ID=cds-UTX05207.1;Parent=gene-NM058_21070;Dbxref=NCBI_GP:UTX05207.1;Name=UTX05207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388093.1;locus_tag=NM058_21070;product=hypothetical protein;protein_id=UTX05207.1;transl_table=11 CP101611.1 Genbank pseudogene 4113571 4114823 . - . ID=gene-NM058_21075;Name=cypC;gbkey=Gene;gene=cypC;gene_biotype=pseudogene;locus_tag=NM058_21075;pseudo=true CP101611.1 Protein Homology CDS 4113571 4114823 . - 0 ID=cds-NM058_21075;Parent=gene-NM058_21075;Note=frameshifted;gbkey=CDS;gene=cypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388092.1;locus_tag=NM058_21075;product=fatty-acid peroxygenase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4114996 4115799 . + . ID=gene-NM058_21080;Name=blaOXA;gbkey=Gene;gene=blaOXA;gene_biotype=protein_coding;locus_tag=NM058_21080 CP101611.1 Protein Homology CDS 4114996 4115799 . + 0 ID=cds-UTX05208.1;Parent=gene-NM058_21080;Dbxref=NCBI_GP:UTX05208.1;Name=UTX05208.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;gene=blaOXA;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388091.1;locus_tag=NM058_21080;product=class D beta-lactamase;protein_id=UTX05208.1;transl_table=11 CP101611.1 Genbank gene 4115829 4116020 . - . ID=gene-NM058_21085;Name=NM058_21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21085 CP101611.1 Protein Homology CDS 4115829 4116020 . - 0 ID=cds-UTX05209.1;Parent=gene-NM058_21085;Dbxref=NCBI_GP:UTX05209.1;Name=UTX05209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388090.1;locus_tag=NM058_21085;product=YbxH family protein;protein_id=UTX05209.1;transl_table=11 CP101611.1 Genbank gene 4116035 4116283 . - . ID=gene-NM058_21090;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=NM058_21090 CP101611.1 Protein Homology CDS 4116035 4116283 . - 0 ID=cds-UTX05210.1;Parent=gene-NM058_21090;Dbxref=NCBI_GP:UTX05210.1;Name=UTX05210.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388089.1;locus_tag=NM058_21090;product=sigma-G-dependent sporulation-specific acid-soluble spore protein CsgA;protein_id=UTX05210.1;transl_table=11 CP101611.1 Genbank gene 4116395 4117783 . - . ID=gene-NM058_21095;Name=NM058_21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21095 CP101611.1 Protein Homology CDS 4116395 4117783 . - 0 ID=cds-UTX05211.1;Parent=gene-NM058_21095;Dbxref=NCBI_GP:UTX05211.1;Name=UTX05211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388088.1;locus_tag=NM058_21095;product=amino acid permease;protein_id=UTX05211.1;transl_table=11 CP101611.1 Genbank gene 4118101 4119285 . - . ID=gene-NM058_21100;Name=NM058_21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21100 CP101611.1 Protein Homology CDS 4118101 4119285 . - 0 ID=cds-UTX05212.1;Parent=gene-NM058_21100;Dbxref=NCBI_GP:UTX05212.1;Name=UTX05212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388087.1;locus_tag=NM058_21100;product=DUF4885 domain-containing protein;protein_id=UTX05212.1;transl_table=11 CP101611.1 Genbank gene 4119417 4120274 . + . ID=gene-NM058_21105;Name=NM058_21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21105 CP101611.1 Protein Homology CDS 4119417 4120274 . + 0 ID=cds-UTX05213.1;Parent=gene-NM058_21105;Dbxref=NCBI_GP:UTX05213.1;Name=UTX05213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388086.1;locus_tag=NM058_21105;product=hypothetical protein;protein_id=UTX05213.1;transl_table=11 CP101611.1 Genbank gene 4120372 4121142 . + . ID=gene-NM058_21110;Name=NM058_21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21110 CP101611.1 Protein Homology CDS 4120372 4121142 . + 0 ID=cds-UTX05214.1;Parent=gene-NM058_21110;Dbxref=NCBI_GP:UTX05214.1;Name=UTX05214.1;Ontology_term=GO:0006468,GO:0004672;gbkey=CDS;go_function=protein kinase activity|0004672||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388085.1;locus_tag=NM058_21110;product=protein kinase;protein_id=UTX05214.1;transl_table=11 CP101611.1 Genbank gene 4121127 4121330 . - . ID=gene-NM058_21115;Name=NM058_21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21115 CP101611.1 Protein Homology CDS 4121127 4121330 . - 0 ID=cds-UTX05215.1;Parent=gene-NM058_21115;Dbxref=NCBI_GP:UTX05215.1;Name=UTX05215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097672.1;locus_tag=NM058_21115;product=hypothetical protein;protein_id=UTX05215.1;transl_table=11 CP101611.1 Genbank gene 4121448 4122434 . - . ID=gene-NM058_21120;Name=NM058_21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21120 CP101611.1 Protein Homology CDS 4121448 4122434 . - 0 ID=cds-UTX05216.1;Parent=gene-NM058_21120;Dbxref=NCBI_GP:UTX05216.1;Name=UTX05216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003234894.1;locus_tag=NM058_21120;product=HAMP domain-containing histidine kinase;protein_id=UTX05216.1;transl_table=11 CP101611.1 Genbank gene 4122431 4123102 . - . ID=gene-NM058_21125;Name=ybdJ;gbkey=Gene;gene=ybdJ;gene_biotype=protein_coding;locus_tag=NM058_21125 CP101611.1 Protein Homology CDS 4122431 4123102 . - 0 ID=cds-UTX05217.1;Parent=gene-NM058_21125;Dbxref=NCBI_GP:UTX05217.1;Name=UTX05217.1;gbkey=CDS;gene=ybdJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388082.1;locus_tag=NM058_21125;product=two-component system response regulator YbdJ;protein_id=UTX05217.1;transl_table=11 CP101611.1 Genbank pseudogene 4123104 4124080 . - . ID=gene-NM058_21130;Name=NM058_21130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_21130;pseudo=true CP101611.1 Protein Homology CDS 4123104 4124080 . - 0 ID=cds-NM058_21130;Parent=gene-NM058_21130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388081.2;locus_tag=NM058_21130;product=alpha/beta hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4124216 4125046 . + . ID=gene-NM058_21135;Name=NM058_21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21135 CP101611.1 Protein Homology CDS 4124216 4125046 . + 0 ID=cds-UTX05218.1;Parent=gene-NM058_21135;Dbxref=NCBI_GP:UTX05218.1;Name=UTX05218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010331462.1;locus_tag=NM058_21135;product=MerR family transcriptional regulator;protein_id=UTX05218.1;transl_table=11 CP101611.1 Genbank gene 4125051 4126046 . + . ID=gene-NM058_21140;Name=NM058_21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21140 CP101611.1 Protein Homology CDS 4125051 4126046 . + 0 ID=cds-UTX05219.1;Parent=gene-NM058_21140;Dbxref=NCBI_GP:UTX05219.1;Name=UTX05219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003327891.1;locus_tag=NM058_21140;product=beta-lactamase family protein;protein_id=UTX05219.1;transl_table=11 CP101611.1 Genbank gene 4126228 4126743 . - . ID=gene-NM058_21145;Name=skfG;gbkey=Gene;gene=skfG;gene_biotype=protein_coding;locus_tag=NM058_21145 CP101611.1 Protein Homology CDS 4126228 4126743 . - 0 ID=cds-UTX05220.1;Parent=gene-NM058_21145;Dbxref=NCBI_GP:UTX05220.1;Name=UTX05220.1;gbkey=CDS;gene=skfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388079.2;locus_tag=NM058_21145;product=sporulation killing factor biosynthesis/export protein SkfG;protein_id=UTX05220.1;transl_table=11 CP101611.1 Genbank gene 4127104 4128276 . - . ID=gene-NM058_21150;Name=NM058_21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21150 CP101611.1 Protein Homology CDS 4127104 4128276 . - 0 ID=cds-UTX05221.1;Parent=gene-NM058_21150;Dbxref=NCBI_GP:UTX05221.1;Name=UTX05221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388070.1;locus_tag=NM058_21150;product=MFS transporter;protein_id=UTX05221.1;transl_table=11 CP101611.1 Genbank gene 4128401 4128703 . - . ID=gene-NM058_21155;Name=NM058_21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21155 CP101611.1 Protein Homology CDS 4128401 4128703 . - 0 ID=cds-UTX05222.1;Parent=gene-NM058_21155;Dbxref=NCBI_GP:UTX05222.1;Name=UTX05222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003097670.1;locus_tag=NM058_21155;product=helix-turn-helix domain-containing protein;protein_id=UTX05222.1;transl_table=11 CP101611.1 Genbank gene 4129040 4129402 . - . ID=gene-NM058_21160;Name=NM058_21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21160 CP101611.1 Protein Homology CDS 4129040 4129402 . - 0 ID=cds-UTX05223.1;Parent=gene-NM058_21160;Dbxref=NCBI_GP:UTX05223.1;Name=UTX05223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257313.1;locus_tag=NM058_21160;product=DUF2294 domain-containing protein;protein_id=UTX05223.1;transl_table=11 CP101611.1 Genbank gene 4129459 4129749 . - . ID=gene-NM058_21165;Name=NM058_21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21165 CP101611.1 Protein Homology CDS 4129459 4129749 . - 0 ID=cds-UTX05224.1;Parent=gene-NM058_21165;Dbxref=NCBI_GP:UTX05224.1;Name=UTX05224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388068.1;locus_tag=NM058_21165;product=DUF6407 family protein;protein_id=UTX05224.1;transl_table=11 CP101611.1 Genbank gene 4129816 4130340 . - . ID=gene-NM058_21170;Name=NM058_21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21170 CP101611.1 Protein Homology CDS 4129816 4130340 . - 0 ID=cds-UTX05225.1;Parent=gene-NM058_21170;Dbxref=NCBI_GP:UTX05225.1;Name=UTX05225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388067.1;locus_tag=NM058_21170;product=carbonic anhydrase;protein_id=UTX05225.1;transl_table=11 CP101611.1 Genbank pseudogene 4130416 4133030 . - . ID=gene-NM058_21175;Name=NM058_21175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_21175;pseudo=true CP101611.1 Protein Homology CDS 4130416 4133030 . - 0 ID=cds-NM058_21175;Parent=gene-NM058_21175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388065.2;locus_tag=NM058_21175;product=YbcC family protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4133045 4134562 . - . ID=gene-NM058_21180;Name=NM058_21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21180 CP101611.1 Protein Homology CDS 4133045 4134562 . - 0 ID=cds-UTX05226.1;Parent=gene-NM058_21180;Dbxref=NCBI_GP:UTX05226.1;Name=UTX05226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388064.1;locus_tag=NM058_21180;product=NADH dehydrogenase subunit 5;protein_id=UTX05226.1;transl_table=11 CP101611.1 Genbank gene 4135170 4136972 . - . ID=gene-NM058_21185;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=NM058_21185 CP101611.1 Protein Homology CDS 4135170 4136972 . - 0 ID=cds-UTX05227.1;Parent=gene-NM058_21185;Dbxref=NCBI_GP:UTX05227.1;Name=UTX05227.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388059.1;locus_tag=NM058_21185;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=UTX05227.1;transl_table=11 CP101611.1 Genbank pseudogene 4137405 4138750 . - . ID=gene-NM058_21190;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=pseudogene;locus_tag=NM058_21190;pseudo=true CP101611.1 Protein Homology CDS 4137405 4138750 . - 0 ID=cds-NM058_21190;Parent=gene-NM058_21190;Note=frameshifted;Ontology_term=GO:0009103,GO:0009252,GO:0008966;gbkey=CDS;gene=glmM;go_function=phosphoglucosamine mutase activity|0008966||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388058.1;locus_tag=NM058_21190;product=phosphoglucosamine mutase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4138769 4140223 . - . ID=gene-NM058_21195;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=NM058_21195 CP101611.1 Protein Homology CDS 4138769 4140223 . - 0 ID=cds-UTX05228.1;Parent=gene-NM058_21195;Dbxref=NCBI_GP:UTX05228.1;Name=UTX05228.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388057.2;locus_tag=NM058_21195;product=CdaA regulatory protein CdaR;protein_id=UTX05228.1;transl_table=11 CP101611.1 Genbank gene 4140216 4141037 . - . ID=gene-NM058_21200;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=NM058_21200 CP101611.1 Protein Homology CDS 4140216 4141037 . - 0 ID=cds-UTX05229.1;Parent=gene-NM058_21200;Dbxref=NCBI_GP:UTX05229.1;Name=UTX05229.1;gbkey=CDS;gene=cdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388056.2;locus_tag=NM058_21200;product=diadenylate cyclase CdaA;protein_id=UTX05229.1;transl_table=11 CP101611.1 Genbank gene 4141198 4141821 . - . ID=gene-NM058_21205;Name=rsiW;gbkey=Gene;gene=rsiW;gene_biotype=protein_coding;locus_tag=NM058_21205 CP101611.1 Protein Homology CDS 4141198 4141821 . - 0 ID=cds-UTX05230.1;Parent=gene-NM058_21205;Dbxref=NCBI_GP:UTX05230.1;Name=UTX05230.1;gbkey=CDS;gene=rsiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388055.1;locus_tag=NM058_21205;product=anti-sigma-W factor RsiW;protein_id=UTX05230.1;transl_table=11 CP101611.1 Genbank gene 4141835 4142398 . - . ID=gene-NM058_21210;Name=sigW;gbkey=Gene;gene=sigW;gene_biotype=protein_coding;locus_tag=NM058_21210 CP101611.1 Protein Homology CDS 4141835 4142398 . - 0 ID=cds-UTX05231.1;Parent=gene-NM058_21210;Dbxref=NCBI_GP:UTX05231.1;Name=UTX05231.1;gbkey=CDS;gene=sigW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388054.1;locus_tag=NM058_21210;product=RNA polymerase sigma factor SigW;protein_id=UTX05231.1;transl_table=11 CP101611.1 Genbank gene 4142627 4142698 . - . ID=gene-NM058_21215;Name=NM058_21215;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_21215 CP101611.1 tRNAscan-SE tRNA 4142627 4142698 . - . ID=rna-NM058_21215;Parent=gene-NM058_21215;anticodon=(pos:complement(4142664..4142666));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21215;product=tRNA-Gln CP101611.1 tRNAscan-SE exon 4142627 4142698 . - . ID=exon-NM058_21215-1;Parent=rna-NM058_21215;anticodon=(pos:complement(4142664..4142666));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21215;product=tRNA-Gln CP101611.1 Genbank gene 4142703 4142786 . - . ID=gene-NM058_21220;Name=NM058_21220;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_21220 CP101611.1 tRNAscan-SE tRNA 4142703 4142786 . - . ID=rna-NM058_21220;Parent=gene-NM058_21220;anticodon=(pos:complement(4142750..4142752));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21220;product=tRNA-Tyr CP101611.1 tRNAscan-SE exon 4142703 4142786 . - . ID=exon-NM058_21220-1;Parent=rna-NM058_21220;anticodon=(pos:complement(4142750..4142752));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21220;product=tRNA-Tyr CP101611.1 Genbank gene 4142807 4142879 . - . ID=gene-NM058_21225;Name=NM058_21225;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_21225 CP101611.1 tRNAscan-SE tRNA 4142807 4142879 . - . ID=rna-NM058_21225;Parent=gene-NM058_21225;anticodon=(pos:complement(4142844..4142846));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21225;product=tRNA-Thr CP101611.1 tRNAscan-SE exon 4142807 4142879 . - . ID=exon-NM058_21225-1;Parent=rna-NM058_21225;anticodon=(pos:complement(4142844..4142846));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21225;product=tRNA-Thr CP101611.1 Genbank gene 4142884 4142959 . - . ID=gene-NM058_21230;Name=NM058_21230;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_21230 CP101611.1 tRNAscan-SE tRNA 4142884 4142959 . - . ID=rna-NM058_21230;Parent=gene-NM058_21230;anticodon=(pos:complement(4142924..4142926));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21230;product=tRNA-Val CP101611.1 tRNAscan-SE exon 4142884 4142959 . - . ID=exon-NM058_21230-1;Parent=rna-NM058_21230;anticodon=(pos:complement(4142924..4142926));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21230;product=tRNA-Val CP101611.1 Genbank gene 4142963 4143037 . - . ID=gene-NM058_21235;Name=NM058_21235;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_21235 CP101611.1 tRNAscan-SE tRNA 4142963 4143037 . - . ID=rna-NM058_21235;Parent=gene-NM058_21235;anticodon=(pos:complement(4143002..4143004));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21235;product=tRNA-Glu CP101611.1 tRNAscan-SE exon 4142963 4143037 . - . ID=exon-NM058_21235-1;Parent=rna-NM058_21235;anticodon=(pos:complement(4143002..4143004));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21235;product=tRNA-Glu CP101611.1 Genbank gene 4143218 4143673 . + . ID=gene-NM058_21240;Name=NM058_21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21240 CP101611.1 Protein Homology CDS 4143218 4143673 . + 0 ID=cds-UTX05232.1;Parent=gene-NM058_21240;Dbxref=NCBI_GP:UTX05232.1;Name=UTX05232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388053.2;locus_tag=NM058_21240;product=DUF523 domain-containing protein;protein_id=UTX05232.1;transl_table=11 CP101611.1 Genbank gene 4143686 4144168 . + . ID=gene-NM058_21245;Name=NM058_21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21245 CP101611.1 Protein Homology CDS 4143686 4144168 . + 0 ID=cds-UTX05233.1;Parent=gene-NM058_21245;Dbxref=NCBI_GP:UTX05233.1;Name=UTX05233.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388052.2;locus_tag=NM058_21245;product=GNAT family N-acetyltransferase;protein_id=UTX05233.1;transl_table=11 CP101611.1 Genbank gene 4144279 4145193 . + . ID=gene-NM058_21250;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=NM058_21250 CP101611.1 Protein Homology CDS 4144279 4145193 . + 0 ID=cds-UTX05234.1;Parent=gene-NM058_21250;Dbxref=NCBI_GP:UTX05234.1;Name=UTX05234.1;Ontology_term=GO:0006040,GO:0009254,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257305.1;locus_tag=NM058_21250;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=UTX05234.1;transl_table=11 CP101611.1 Genbank gene 4145210 4146061 . + . ID=gene-NM058_21255;Name=NM058_21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21255 CP101611.1 Protein Homology CDS 4145210 4146061 . + 0 ID=cds-UTX05235.1;Parent=gene-NM058_21255;Dbxref=NCBI_GP:UTX05235.1;Name=UTX05235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388050.1;locus_tag=NM058_21255;product=MurR/RpiR family transcriptional regulator;protein_id=UTX05235.1;transl_table=11 CP101611.1 Genbank pseudogene 4146087 4147452 . + . ID=gene-NM058_21260;Name=NM058_21260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_21260;pseudo=true CP101611.1 Protein Homology CDS 4146087 4147452 . + 0 ID=cds-NM058_21260;Parent=gene-NM058_21260;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388049.3;locus_tag=NM058_21260;product=PTS transporter subunit EIIC;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4147508 4148833 . + . ID=gene-NM058_21265;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=NM058_21265 CP101611.1 Protein Homology CDS 4147508 4148833 . + 0 ID=cds-UTX05236.1;Parent=gene-NM058_21265;Dbxref=NCBI_GP:UTX05236.1;Name=UTX05236.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388048.2;locus_tag=NM058_21265;product=penicillin binding protein PBP4B;protein_id=UTX05236.1;transl_table=11 CP101611.1 Genbank pseudogene 4148861 4150788 . + . ID=gene-NM058_21270;Name=NM058_21270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_21270;pseudo=true CP101611.1 Protein Homology CDS 4148861 4150788 . + 0 ID=cds-NM058_21270;Parent=gene-NM058_21270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388047.1;locus_tag=NM058_21270;product=glycoside hydrolase family 3 protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 4150802 4152045 . + . ID=gene-NM058_21275;Name=NM058_21275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_21275;pseudo=true CP101611.1 Protein Homology CDS 4150802 4152045 . + 0 ID=cds-NM058_21275;Parent=gene-NM058_21275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388046.1;locus_tag=NM058_21275;product=DUF1343 domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4152234 4152461 . + . ID=gene-NM058_21280;Name=NM058_21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21280 CP101611.1 GeneMarkS-2+ CDS 4152234 4152461 . + 0 ID=cds-UTX05237.1;Parent=gene-NM058_21280;Dbxref=NCBI_GP:UTX05237.1;Name=UTX05237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NM058_21280;product=hypothetical protein;protein_id=UTX05237.1;transl_table=11 CP101611.1 Genbank pseudogene 4152794 4152967 . + . ID=gene-NM058_21285;Name=NM058_21285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_21285;pseudo=true CP101611.1 Protein Homology CDS 4152794 4152967 . + 0 ID=cds-NM058_21285;Parent=gene-NM058_21285;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=NM058_21285;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 4153060 4153820 . + . ID=gene-NM058_21290;Name=NM058_21290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_21290;pseudo=true CP101611.1 Protein Homology CDS 4153060 4153820 . + 0 ID=cds-NM058_21290;Parent=gene-NM058_21290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013648.2;locus_tag=NM058_21290;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 4153911 4154863 . + . ID=gene-NM058_21295;Name=feuA;gbkey=Gene;gene=feuA;gene_biotype=pseudogene;locus_tag=NM058_21295;pseudo=true CP101611.1 Protein Homology CDS 4153911 4154863 . + 0 ID=cds-NM058_21295;Parent=gene-NM058_21295;Note=frameshifted;gbkey=CDS;gene=feuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388044.1;locus_tag=NM058_21295;product=iron ABC transporter substrate-binding protein FeuA;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 4154882 4155885 . + . ID=gene-NM058_21300;Name=NM058_21300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_21300;pseudo=true CP101611.1 Protein Homology CDS 4154882 4155885 . + 0 ID=cds-NM058_21300;Parent=gene-NM058_21300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388043.1;locus_tag=NM058_21300;product=iron ABC transporter permease;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4155878 4156888 . + . ID=gene-NM058_21305;Name=feuC;gbkey=Gene;gene=feuC;gene_biotype=protein_coding;locus_tag=NM058_21305 CP101611.1 Protein Homology CDS 4155878 4156888 . + 0 ID=cds-UTX05238.1;Parent=gene-NM058_21305;Dbxref=NCBI_GP:UTX05238.1;Name=UTX05238.1;gbkey=CDS;gene=feuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388042.2;locus_tag=NM058_21305;product=iron ABC transporter permease FeuC;protein_id=UTX05238.1;transl_table=11 CP101611.1 Genbank gene 4156885 4157637 . + . ID=gene-NM058_21310;Name=NM058_21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21310 CP101611.1 Protein Homology CDS 4156885 4157637 . + 0 ID=cds-UTX05239.1;Parent=gene-NM058_21310;Dbxref=NCBI_GP:UTX05239.1;Name=UTX05239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388041.2;locus_tag=NM058_21310;product=alpha/beta hydrolase-fold protein;protein_id=UTX05239.1;transl_table=11 CP101611.1 Genbank gene 4157648 4158568 . - . ID=gene-NM058_21315;Name=NM058_21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21315 CP101611.1 Protein Homology CDS 4157648 4158568 . - 0 ID=cds-UTX07125.1;Parent=gene-NM058_21315;Dbxref=NCBI_GP:UTX07125.1;Name=UTX07125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388040.2;locus_tag=NM058_21315;product=bile acid:sodium symporter family protein;protein_id=UTX07125.1;transl_table=11 CP101611.1 Genbank pseudogene 4158714 4160148 . - . ID=gene-NM058_21320;Name=NM058_21320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_21320;pseudo=true CP101611.1 Protein Homology CDS 4158714 4160148 . - 0 ID=cds-NM058_21320;Parent=gene-NM058_21320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019713137.1;locus_tag=NM058_21320;product=SulP family inorganic anion transporter;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4160388 4161434 . - . ID=gene-NM058_21325;Name=NM058_21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21325 CP101611.1 Protein Homology CDS 4160388 4161434 . - 0 ID=cds-UTX05240.1;Parent=gene-NM058_21325;Dbxref=NCBI_GP:UTX05240.1;Name=UTX05240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016936937.1;locus_tag=NM058_21325;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=UTX05240.1;transl_table=11 CP101611.1 Genbank gene 4161409 4162359 . - . ID=gene-NM058_21330;Name=NM058_21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21330 CP101611.1 Protein Homology CDS 4161409 4162359 . - 0 ID=cds-UTX05241.1;Parent=gene-NM058_21330;Dbxref=NCBI_GP:UTX05241.1;Name=UTX05241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003156785.1;locus_tag=NM058_21330;product=hypothetical protein;protein_id=UTX05241.1;transl_table=11 CP101611.1 Genbank gene 4162356 4163621 . - . ID=gene-NM058_21335;Name=NM058_21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21335 CP101611.1 Protein Homology CDS 4162356 4163621 . - 0 ID=cds-UTX05242.1;Parent=gene-NM058_21335;Dbxref=NCBI_GP:UTX05242.1;Name=UTX05242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007408029.1;locus_tag=NM058_21335;product=aspartate aminotransferase family protein;protein_id=UTX05242.1;transl_table=11 CP101611.1 Genbank gene 4163893 4165116 . + . ID=gene-NM058_21340;Name=NM058_21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21340 CP101611.1 Protein Homology CDS 4163893 4165116 . + 0 ID=cds-UTX05243.1;Parent=gene-NM058_21340;Dbxref=NCBI_GP:UTX05243.1;Name=UTX05243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019257290.1;locus_tag=NM058_21340;product=MFS transporter;protein_id=UTX05243.1;transl_table=11 CP101611.1 Genbank gene 4165155 4165270 . - . ID=gene-NM058_21345;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NM058_21345 CP101611.1 cmsearch rRNA 4165155 4165270 . - . ID=rna-NM058_21345;Parent=gene-NM058_21345;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_21345;product=5S ribosomal RNA CP101611.1 cmsearch exon 4165155 4165270 . - . ID=exon-NM058_21345-1;Parent=rna-NM058_21345;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_21345;product=5S ribosomal RNA CP101611.1 Genbank gene 4165325 4168252 . - . ID=gene-NM058_21350;Name=NM058_21350;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_21350 CP101611.1 cmsearch rRNA 4165325 4168252 . - . ID=rna-NM058_21350;Parent=gene-NM058_21350;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_21350;product=23S ribosomal RNA CP101611.1 cmsearch exon 4165325 4168252 . - . ID=exon-NM058_21350-1;Parent=rna-NM058_21350;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_21350;product=23S ribosomal RNA CP101611.1 Genbank gene 4168422 4169971 . - . ID=gene-NM058_21355;Name=NM058_21355;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_21355 CP101611.1 cmsearch rRNA 4168422 4169971 . - . ID=rna-NM058_21355;Parent=gene-NM058_21355;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_21355;product=16S ribosomal RNA CP101611.1 cmsearch exon 4168422 4169971 . - . ID=exon-NM058_21355-1;Parent=rna-NM058_21355;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_21355;product=16S ribosomal RNA CP101611.1 Genbank gene 4170162 4170277 . - . ID=gene-NM058_21360;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NM058_21360 CP101611.1 cmsearch rRNA 4170162 4170277 . - . ID=rna-NM058_21360;Parent=gene-NM058_21360;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_21360;product=5S ribosomal RNA CP101611.1 cmsearch exon 4170162 4170277 . - . ID=exon-NM058_21360-1;Parent=rna-NM058_21360;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_21360;product=5S ribosomal RNA CP101611.1 Genbank gene 4170332 4173259 . - . ID=gene-NM058_21365;Name=NM058_21365;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_21365 CP101611.1 cmsearch rRNA 4170332 4173259 . - . ID=rna-NM058_21365;Parent=gene-NM058_21365;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_21365;product=23S ribosomal RNA CP101611.1 cmsearch exon 4170332 4173259 . - . ID=exon-NM058_21365-1;Parent=rna-NM058_21365;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_21365;product=23S ribosomal RNA CP101611.1 Genbank gene 4173429 4174979 . - . ID=gene-NM058_21370;Name=NM058_21370;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_21370 CP101611.1 cmsearch rRNA 4173429 4174979 . - . ID=rna-NM058_21370;Parent=gene-NM058_21370;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_21370;product=16S ribosomal RNA CP101611.1 cmsearch exon 4173429 4174979 . - . ID=exon-NM058_21370-1;Parent=rna-NM058_21370;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_21370;product=16S ribosomal RNA CP101611.1 Genbank gene 4175151 4175226 . - . ID=gene-NM058_21375;Name=NM058_21375;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_21375 CP101611.1 tRNAscan-SE tRNA 4175151 4175226 . - . ID=rna-NM058_21375;Parent=gene-NM058_21375;anticodon=(pos:complement(4175191..4175193));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21375;product=tRNA-Ala CP101611.1 tRNAscan-SE exon 4175151 4175226 . - . ID=exon-NM058_21375-1;Parent=rna-NM058_21375;anticodon=(pos:complement(4175191..4175193));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21375;product=tRNA-Ala CP101611.1 Genbank gene 4175234 4175310 . - . ID=gene-NM058_21380;Name=NM058_21380;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_21380 CP101611.1 tRNAscan-SE tRNA 4175234 4175310 . - . ID=rna-NM058_21380;Parent=gene-NM058_21380;anticodon=(pos:complement(4175274..4175276));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21380;product=tRNA-Pro CP101611.1 tRNAscan-SE exon 4175234 4175310 . - . ID=exon-NM058_21380-1;Parent=rna-NM058_21380;anticodon=(pos:complement(4175274..4175276));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21380;product=tRNA-Pro CP101611.1 Genbank gene 4175338 4175414 . - . ID=gene-NM058_21385;Name=NM058_21385;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_21385 CP101611.1 tRNAscan-SE tRNA 4175338 4175414 . - . ID=rna-NM058_21385;Parent=gene-NM058_21385;anticodon=(pos:complement(4175378..4175380));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21385;product=tRNA-Arg CP101611.1 tRNAscan-SE exon 4175338 4175414 . - . ID=exon-NM058_21385-1;Parent=rna-NM058_21385;anticodon=(pos:complement(4175378..4175380));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21385;product=tRNA-Arg CP101611.1 Genbank gene 4175448 4175522 . - . ID=gene-NM058_21390;Name=NM058_21390;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_21390 CP101611.1 tRNAscan-SE tRNA 4175448 4175522 . - . ID=rna-NM058_21390;Parent=gene-NM058_21390;anticodon=(pos:complement(4175488..4175490));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21390;product=tRNA-Gly CP101611.1 tRNAscan-SE exon 4175448 4175522 . - . ID=exon-NM058_21390-1;Parent=rna-NM058_21390;anticodon=(pos:complement(4175488..4175490));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21390;product=tRNA-Gly CP101611.1 Genbank gene 4175587 4175659 . - . ID=gene-NM058_21395;Name=NM058_21395;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_21395 CP101611.1 tRNAscan-SE tRNA 4175587 4175659 . - . ID=rna-NM058_21395;Parent=gene-NM058_21395;anticodon=(pos:complement(4175624..4175626));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21395;product=tRNA-Thr CP101611.1 tRNAscan-SE exon 4175587 4175659 . - . ID=exon-NM058_21395-1;Parent=rna-NM058_21395;anticodon=(pos:complement(4175624..4175626));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21395;product=tRNA-Thr CP101611.1 Genbank gene 4175662 4175736 . - . ID=gene-NM058_21400;Name=NM058_21400;gbkey=Gene;gene_biotype=tRNA;locus_tag=NM058_21400 CP101611.1 tRNAscan-SE tRNA 4175662 4175736 . - . ID=rna-NM058_21400;Parent=gene-NM058_21400;anticodon=(pos:complement(4175702..4175704));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21400;product=tRNA-Asn CP101611.1 tRNAscan-SE exon 4175662 4175736 . - . ID=exon-NM058_21400-1;Parent=rna-NM058_21400;anticodon=(pos:complement(4175702..4175704));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NM058_21400;product=tRNA-Asn CP101611.1 Genbank gene 4175781 4175896 . - . ID=gene-NM058_21405;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NM058_21405 CP101611.1 cmsearch rRNA 4175781 4175896 . - . ID=rna-NM058_21405;Parent=gene-NM058_21405;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_21405;product=5S ribosomal RNA CP101611.1 cmsearch exon 4175781 4175896 . - . ID=exon-NM058_21405-1;Parent=rna-NM058_21405;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_21405;product=5S ribosomal RNA CP101611.1 Genbank gene 4175951 4178878 . - . ID=gene-NM058_21410;Name=NM058_21410;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_21410 CP101611.1 cmsearch rRNA 4175951 4178878 . - . ID=rna-NM058_21410;Parent=gene-NM058_21410;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_21410;product=23S ribosomal RNA CP101611.1 cmsearch exon 4175951 4178878 . - . ID=exon-NM058_21410-1;Parent=rna-NM058_21410;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_21410;product=23S ribosomal RNA CP101611.1 Genbank gene 4179048 4180597 . - . ID=gene-NM058_21415;Name=NM058_21415;gbkey=Gene;gene_biotype=rRNA;locus_tag=NM058_21415 CP101611.1 cmsearch rRNA 4179048 4180597 . - . ID=rna-NM058_21415;Parent=gene-NM058_21415;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_21415;product=16S ribosomal RNA CP101611.1 cmsearch exon 4179048 4180597 . - . ID=exon-NM058_21415-1;Parent=rna-NM058_21415;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NM058_21415;product=16S ribosomal RNA CP101611.1 Genbank gene 4180949 4181713 . + . ID=gene-NM058_21420;Name=pdaB;gbkey=Gene;gene=pdaB;gene_biotype=protein_coding;locus_tag=NM058_21420 CP101611.1 Protein Homology CDS 4180949 4181713 . + 0 ID=cds-UTX05244.1;Parent=gene-NM058_21420;Dbxref=NCBI_GP:UTX05244.1;Name=UTX05244.1;Ontology_term=GO:0030436,GO:0003674;gbkey=CDS;gene=pdaB;go_function=molecular_function|0003674||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388038.1;locus_tag=NM058_21420;product=polysaccharide deacetylase family sporulation protein PdaB;protein_id=UTX05244.1;transl_table=11 CP101611.1 Genbank gene 4181715 4182311 . - . ID=gene-NM058_21425;Name=kbaA;gbkey=Gene;gene=kbaA;gene_biotype=protein_coding;locus_tag=NM058_21425 CP101611.1 Protein Homology CDS 4181715 4182311 . - 0 ID=cds-UTX05245.1;Parent=gene-NM058_21425;Dbxref=NCBI_GP:UTX05245.1;Name=UTX05245.1;gbkey=CDS;gene=kbaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388037.1;locus_tag=NM058_21425;product=KinB-signaling pathway activation protein;protein_id=UTX05245.1;transl_table=11 CP101611.1 Genbank pseudogene 4182421 4182976 . + . ID=gene-NM058_21430;Name=gerD;gbkey=Gene;gene=gerD;gene_biotype=pseudogene;locus_tag=NM058_21430;pseudo=true CP101611.1 Protein Homology CDS 4182421 4182976 . + 0 ID=cds-NM058_21430;Parent=gene-NM058_21430;Note=frameshifted;Ontology_term=GO:0009847;gbkey=CDS;gene=gerD;go_process=spore germination|0009847||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388036.1;locus_tag=NM058_21430;product=spore germination lipoprotein GerD;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4183014 4184072 . - . ID=gene-NM058_21435;Name=salA;gbkey=Gene;gene=salA;gene_biotype=protein_coding;locus_tag=NM058_21435 CP101611.1 Protein Homology CDS 4183014 4184072 . - 0 ID=cds-UTX05246.1;Parent=gene-NM058_21435;Dbxref=NCBI_GP:UTX05246.1;Name=UTX05246.1;gbkey=CDS;gene=salA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388035.1;locus_tag=NM058_21435;product=iron-sulfur carrier protein/transcriptional regulator SalA;protein_id=UTX05246.1;transl_table=11 CP101611.1 Genbank gene 4184168 4184881 . - . ID=gene-NM058_21440;Name=cwlD;gbkey=Gene;gene=cwlD;gene_biotype=protein_coding;locus_tag=NM058_21440 CP101611.1 Protein Homology CDS 4184168 4184881 . - 0 ID=cds-UTX05247.1;Parent=gene-NM058_21440;Dbxref=NCBI_GP:UTX05247.1;Name=UTX05247.1;Ontology_term=GO:0030436,GO:0008745;gbkey=CDS;gene=cwlD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=asexual sporulation|0030436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388034.1;locus_tag=NM058_21440;product=N-acetylmuramoyl-L-alanine amidase CwlD;protein_id=UTX05247.1;transl_table=11 CP101611.1 Genbank gene 4184941 4185384 . - . ID=gene-NM058_21445;Name=NM058_21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21445 CP101611.1 Protein Homology CDS 4184941 4185384 . - 0 ID=cds-UTX05248.1;Parent=gene-NM058_21445;Dbxref=NCBI_GP:UTX05248.1;Name=UTX05248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388033.1;locus_tag=NM058_21445;product=YbaK family protein;protein_id=UTX05248.1;transl_table=11 CP101611.1 Genbank gene 4185581 4186345 . - . ID=gene-NM058_21450;Name=NM058_21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21450 CP101611.1 Protein Homology CDS 4185581 4186345 . - 0 ID=cds-UTX05249.1;Parent=gene-NM058_21450;Dbxref=NCBI_GP:UTX05249.1;Name=UTX05249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388032.2;locus_tag=NM058_21450;product=class I SAM-dependent methyltransferase;protein_id=UTX05249.1;transl_table=11 CP101611.1 Genbank gene 4186847 4187239 . - . ID=gene-NM058_21455;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=NM058_21455 CP101611.1 Protein Homology CDS 4186847 4187239 . - 0 ID=cds-UTX05250.1;Parent=gene-NM058_21455;Dbxref=NCBI_GP:UTX05250.1;Name=UTX05250.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002009728.1;locus_tag=NM058_21455;product=30S ribosomal protein S9;protein_id=UTX05250.1;transl_table=11 CP101611.1 Genbank pseudogene 4187260 4187696 . - . ID=gene-NM058_21460;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=pseudogene;locus_tag=NM058_21460;pseudo=true CP101611.1 Protein Homology CDS 4187260 4187696 . - 0 ID=cds-NM058_21460;Parent=gene-NM058_21460;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388030.2;locus_tag=NM058_21460;product=50S ribosomal protein L13;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 4187858 4188600 . - . ID=gene-NM058_21465;Name=truA;gbkey=Gene;gene=truA;gene_biotype=pseudogene;locus_tag=NM058_21465;pseudo=true CP101611.1 Protein Homology CDS 4187858 4188600 . - 0 ID=cds-NM058_21465;Parent=gene-NM058_21465;Note=frameshifted;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388029.2;locus_tag=NM058_21465;product=tRNA pseudouridine(38-40) synthase TruA;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4188610 4189407 . - . ID=gene-NM058_21470;Name=NM058_21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21470 CP101611.1 Protein Homology CDS 4188610 4189407 . - 0 ID=cds-UTX05251.1;Parent=gene-NM058_21470;Dbxref=NCBI_GP:UTX05251.1;Name=UTX05251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013350822.1;locus_tag=NM058_21470;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=UTX05251.1;transl_table=11 CP101611.1 Genbank gene 4189404 4190273 . - . ID=gene-NM058_21475;Name=NM058_21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21475 CP101611.1 Protein Homology CDS 4189404 4190273 . - 0 ID=cds-UTX05252.1;Parent=gene-NM058_21475;Dbxref=NCBI_GP:UTX05252.1;Name=UTX05252.1;Ontology_term=GO:0055085,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010332785.1;locus_tag=NM058_21475;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=UTX05252.1;transl_table=11 CP101611.1 Genbank gene 4190249 4191094 . - . ID=gene-NM058_21480;Name=NM058_21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21480 CP101611.1 Protein Homology CDS 4190249 4191094 . - 0 ID=cds-UTX05253.1;Parent=gene-NM058_21480;Dbxref=NCBI_GP:UTX05253.1;Name=UTX05253.1;Ontology_term=GO:0055085,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388026.2;locus_tag=NM058_21480;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=UTX05253.1;transl_table=11 CP101611.1 Genbank gene 4191225 4191329 . - . ID=gene-NM058_21485;Name=NM058_21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21485 CP101611.1 Protein Homology CDS 4191225 4191329 . - 0 ID=cds-UTX07126.1;Parent=gene-NM058_21485;Dbxref=NCBI_GP:UTX07126.1;Name=UTX07126.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00059.1;locus_tag=NM058_21485;product=hypothetical protein;protein_id=UTX07126.1;transl_table=11 CP101611.1 Genbank gene 4191281 4191586 . - . ID=gene-NM058_21490;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=NM058_21490 CP101611.1 Protein Homology CDS 4191281 4191586 . - 0 ID=cds-UTX05254.1;Parent=gene-NM058_21490;Dbxref=NCBI_GP:UTX05254.1;Name=UTX05254.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR00059.1;locus_tag=NM058_21490;product=50S ribosomal protein L17;protein_id=UTX05254.1;transl_table=11 CP101611.1 Genbank gene 4191664 4192608 . - . ID=gene-NM058_21495;Name=NM058_21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21495 CP101611.1 Protein Homology CDS 4191664 4192608 . - 0 ID=cds-UTX05255.1;Parent=gene-NM058_21495;Dbxref=NCBI_GP:UTX05255.1;Name=UTX05255.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003178382.1;locus_tag=NM058_21495;product=DNA-directed RNA polymerase subunit alpha;protein_id=UTX05255.1;transl_table=11 CP101611.1 Genbank gene 4192785 4193141 . - . ID=gene-NM058_21500;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=NM058_21500 CP101611.1 Protein Homology CDS 4192785 4193141 . - 0 ID=cds-UTX05256.1;Parent=gene-NM058_21500;Dbxref=NCBI_GP:UTX05256.1;Name=UTX05256.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019375510.1;locus_tag=NM058_21500;product=30S ribosomal protein S11;protein_id=UTX05256.1;transl_table=11 CP101611.1 Genbank gene 4193200 4193565 . - . ID=gene-NM058_21505;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=NM058_21505 CP101611.1 Protein Homology CDS 4193200 4193565 . - 0 ID=cds-UTX05257.1;Parent=gene-NM058_21505;Dbxref=NCBI_GP:UTX05257.1;Name=UTX05257.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012748902.1;locus_tag=NM058_21505;product=30S ribosomal protein S13;protein_id=UTX05257.1;transl_table=11 CP101611.1 Genbank gene 4193588 4193701 . - . ID=gene-NM058_21510;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=NM058_21510 CP101611.1 Protein Homology CDS 4193588 4193701 . - 0 ID=cds-UTX05258.1;Parent=gene-NM058_21510;Dbxref=NCBI_GP:UTX05258.1;Name=UTX05258.1;gbkey=CDS;gene=rpmJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1;locus_tag=NM058_21510;product=50S ribosomal protein L36;protein_id=UTX05258.1;transl_table=11 CP101611.1 Genbank gene 4193735 4193953 . - . ID=gene-NM058_21515;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=NM058_21515 CP101611.1 Protein Homology CDS 4193735 4193953 . - 0 ID=cds-UTX05259.1;Parent=gene-NM058_21515;Dbxref=NCBI_GP:UTX05259.1;Name=UTX05259.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017185218.1;locus_tag=NM058_21515;product=translation initiation factor IF-1;protein_id=UTX05259.1;transl_table=11 CP101611.1 Genbank gene 4194265 4195011 . - . ID=gene-NM058_21520;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=NM058_21520 CP101611.1 Protein Homology CDS 4194265 4195011 . - 0 ID=cds-UTX05260.1;Parent=gene-NM058_21520;Dbxref=NCBI_GP:UTX05260.1;Name=UTX05260.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388019.1;locus_tag=NM058_21520;product=type I methionyl aminopeptidase;protein_id=UTX05260.1;transl_table=11 CP101611.1 Genbank gene 4195008 4195661 . - . ID=gene-NM058_21525;Name=NM058_21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21525 CP101611.1 Protein Homology CDS 4195008 4195661 . - 0 ID=cds-UTX05261.1;Parent=gene-NM058_21525;Dbxref=NCBI_GP:UTX05261.1;Name=UTX05261.1;Ontology_term=GO:0006139,GO:0005524,GO:0016776,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388018.1;locus_tag=NM058_21525;product=adenylate kinase;protein_id=UTX05261.1;transl_table=11 CP101611.1 Genbank gene 4195716 4197011 . - . ID=gene-NM058_21530;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=NM058_21530 CP101611.1 Protein Homology CDS 4195716 4197011 . - 0 ID=cds-UTX05262.1;Parent=gene-NM058_21530;Dbxref=NCBI_GP:UTX05262.1;Name=UTX05262.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secY;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388017.1;locus_tag=NM058_21530;product=preprotein translocase subunit SecY;protein_id=UTX05262.1;transl_table=11 CP101611.1 Genbank gene 4197013 4197453 . - . ID=gene-NM058_21535;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=NM058_21535 CP101611.1 Protein Homology CDS 4197013 4197453 . - 0 ID=cds-UTX05263.1;Parent=gene-NM058_21535;Dbxref=NCBI_GP:UTX05263.1;Name=UTX05263.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388016.1;locus_tag=NM058_21535;product=50S ribosomal protein L15;protein_id=UTX05263.1;transl_table=11 CP101611.1 Genbank gene 4197484 4197663 . - . ID=gene-NM058_21540;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=NM058_21540 CP101611.1 Protein Homology CDS 4197484 4197663 . - 0 ID=cds-UTX05264.1;Parent=gene-NM058_21540;Dbxref=NCBI_GP:UTX05264.1;Name=UTX05264.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388015.1;locus_tag=NM058_21540;product=50S ribosomal protein L30;protein_id=UTX05264.1;transl_table=11 CP101611.1 Genbank gene 4197677 4198177 . - . ID=gene-NM058_21545;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=NM058_21545 CP101611.1 Protein Homology CDS 4197677 4198177 . - 0 ID=cds-UTX07127.1;Parent=gene-NM058_21545;Dbxref=NCBI_GP:UTX07127.1;Name=UTX07127.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003328273.1;locus_tag=NM058_21545;product=30S ribosomal protein S5;protein_id=UTX07127.1;transl_table=11 CP101611.1 Genbank gene 4198202 4198564 . - . ID=gene-NM058_21550;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=NM058_21550 CP101611.1 Protein Homology CDS 4198202 4198564 . - 0 ID=cds-UTX05265.1;Parent=gene-NM058_21550;Dbxref=NCBI_GP:UTX05265.1;Name=UTX05265.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388013.2;locus_tag=NM058_21550;product=50S ribosomal protein L18;protein_id=UTX05265.1;transl_table=11 CP101611.1 Genbank gene 4198597 4199136 . - . ID=gene-NM058_21555;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=NM058_21555 CP101611.1 Protein Homology CDS 4198597 4199136 . - 0 ID=cds-UTX05266.1;Parent=gene-NM058_21555;Dbxref=NCBI_GP:UTX05266.1;Name=UTX05266.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388012.1;locus_tag=NM058_21555;product=50S ribosomal protein L6;protein_id=UTX05266.1;transl_table=11 CP101611.1 Genbank gene 4199166 4199564 . - . ID=gene-NM058_21560;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=NM058_21560 CP101611.1 Protein Homology CDS 4199166 4199564 . - 0 ID=cds-UTX05267.1;Parent=gene-NM058_21560;Dbxref=NCBI_GP:UTX05267.1;Name=UTX05267.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003241998.1;locus_tag=NM058_21560;product=30S ribosomal protein S8;protein_id=UTX05267.1;transl_table=11 CP101611.1 Genbank gene 4199596 4199781 . - . ID=gene-NM058_21565;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=NM058_21565 CP101611.1 Protein Homology CDS 4199596 4199781 . - 0 ID=cds-UTX05268.1;Parent=gene-NM058_21565;Dbxref=NCBI_GP:UTX05268.1;Name=UTX05268.1;gbkey=CDS;gene=rpsN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1;locus_tag=NM058_21565;product=30S ribosomal protein S14;protein_id=UTX05268.1;transl_table=11 CP101611.1 Genbank gene 4199804 4200343 . - . ID=gene-NM058_21570;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=NM058_21570 CP101611.1 Protein Homology CDS 4199804 4200343 . - 0 ID=cds-UTX05269.1;Parent=gene-NM058_21570;Dbxref=NCBI_GP:UTX05269.1;Name=UTX05269.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388009.1;locus_tag=NM058_21570;product=50S ribosomal protein L5;protein_id=UTX05269.1;transl_table=11 CP101611.1 Genbank gene 4200370 4200681 . - . ID=gene-NM058_21575;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=NM058_21575 CP101611.1 Protein Homology CDS 4200370 4200681 . - 0 ID=cds-UTX05270.1;Parent=gene-NM058_21575;Dbxref=NCBI_GP:UTX05270.1;Name=UTX05270.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388008.1;locus_tag=NM058_21575;product=50S ribosomal protein L24;protein_id=UTX05270.1;transl_table=11 CP101611.1 Genbank gene 4200718 4201086 . - . ID=gene-NM058_21580;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=NM058_21580 CP101611.1 Protein Homology CDS 4200718 4201086 . - 0 ID=cds-UTX05271.1;Parent=gene-NM058_21580;Dbxref=NCBI_GP:UTX05271.1;Name=UTX05271.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=NM058_21580;product=50S ribosomal protein L14;protein_id=UTX05271.1;transl_table=11 CP101611.1 Genbank gene 4201127 4201390 . - . ID=gene-NM058_21585;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=NM058_21585 CP101611.1 Protein Homology CDS 4201127 4201390 . - 0 ID=cds-UTX05272.1;Parent=gene-NM058_21585;Dbxref=NCBI_GP:UTX05272.1;Name=UTX05272.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011983253.1;locus_tag=NM058_21585;product=30S ribosomal protein S17;protein_id=UTX05272.1;transl_table=11 CP101611.1 Genbank gene 4201413 4201613 . - . ID=gene-NM058_21590;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=NM058_21590 CP101611.1 Protein Homology CDS 4201413 4201613 . - 0 ID=cds-UTX05273.1;Parent=gene-NM058_21590;Dbxref=NCBI_GP:UTX05273.1;Name=UTX05273.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388005.1;locus_tag=NM058_21590;product=50S ribosomal protein L29;protein_id=UTX05273.1;transl_table=11 CP101611.1 Genbank gene 4201603 4202037 . - . ID=gene-NM058_21595;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=NM058_21595 CP101611.1 Protein Homology CDS 4201603 4202037 . - 0 ID=cds-UTX05274.1;Parent=gene-NM058_21595;Dbxref=NCBI_GP:UTX05274.1;Name=UTX05274.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003225801.1;locus_tag=NM058_21595;product=50S ribosomal protein L16;protein_id=UTX05274.1;transl_table=11 CP101611.1 Genbank pseudogene 4202039 4202696 . - . ID=gene-NM058_21600;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=pseudogene;locus_tag=NM058_21600;pseudo=true CP101611.1 Protein Homology CDS 4202039 4202696 . - 0 ID=cds-NM058_21600;Parent=gene-NM058_21600;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388003.2;locus_tag=NM058_21600;product=30S ribosomal protein S3;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4202700 4203041 . - . ID=gene-NM058_21605;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=NM058_21605 CP101611.1 Protein Homology CDS 4202700 4203041 . - 0 ID=cds-UTX05275.1;Parent=gene-NM058_21605;Dbxref=NCBI_GP:UTX05275.1;Name=UTX05275.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001148024.1;locus_tag=NM058_21605;product=50S ribosomal protein L22;protein_id=UTX05275.1;transl_table=11 CP101611.1 Genbank gene 4203058 4203336 . - . ID=gene-NM058_21610;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=NM058_21610 CP101611.1 Protein Homology CDS 4203058 4203336 . - 0 ID=cds-UTX05276.1;Parent=gene-NM058_21610;Dbxref=NCBI_GP:UTX05276.1;Name=UTX05276.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000124454.1;locus_tag=NM058_21610;product=30S ribosomal protein S19;protein_id=UTX05276.1;transl_table=11 CP101611.1 Genbank gene 4203394 4204227 . - . ID=gene-NM058_21615;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=NM058_21615 CP101611.1 Protein Homology CDS 4203394 4204227 . - 0 ID=cds-UTX05277.1;Parent=gene-NM058_21615;Dbxref=NCBI_GP:UTX05277.1;Name=UTX05277.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_388000.2;locus_tag=NM058_21615;product=50S ribosomal protein L2;protein_id=UTX05277.1;transl_table=11 CP101611.1 Genbank gene 4204259 4204546 . - . ID=gene-NM058_21620;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=NM058_21620 CP101611.1 Protein Homology CDS 4204259 4204546 . - 0 ID=cds-UTX05278.1;Parent=gene-NM058_21620;Dbxref=NCBI_GP:UTX05278.1;Name=UTX05278.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387999.2;locus_tag=NM058_21620;product=50S ribosomal protein L23;protein_id=UTX05278.1;transl_table=11 CP101611.1 Genbank gene 4204546 4205169 . - . ID=gene-NM058_21625;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=NM058_21625 CP101611.1 Protein Homology CDS 4204546 4205169 . - 0 ID=cds-UTX05279.1;Parent=gene-NM058_21625;Dbxref=NCBI_GP:UTX05279.1;Name=UTX05279.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387998.1;locus_tag=NM058_21625;product=50S ribosomal protein L4;protein_id=UTX05279.1;transl_table=11 CP101611.1 Genbank gene 4205197 4205826 . - . ID=gene-NM058_21630;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=NM058_21630 CP101611.1 Protein Homology CDS 4205197 4205826 . - 0 ID=cds-UTX05280.1;Parent=gene-NM058_21630;Dbxref=NCBI_GP:UTX05280.1;Name=UTX05280.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387997.1;locus_tag=NM058_21630;product=50S ribosomal protein L3;protein_id=UTX05280.1;transl_table=11 CP101611.1 Genbank gene 4205866 4206174 . - . ID=gene-NM058_21635;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=NM058_21635 CP101611.1 Protein Homology CDS 4205866 4206174 . - 0 ID=cds-UTX05281.1;Parent=gene-NM058_21635;Dbxref=NCBI_GP:UTX05281.1;Name=UTX05281.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118669.1;locus_tag=NM058_21635;product=30S ribosomal protein S10;protein_id=UTX05281.1;transl_table=11 CP101611.1 Genbank pseudogene 4206411 4207366 . - . ID=gene-NM058_21640;Name=NM058_21640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_21640;pseudo=true CP101611.1 Protein Homology CDS 4206411 4207366 . - 0 ID=cds-NM058_21640;Parent=gene-NM058_21640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387995.2;locus_tag=NM058_21640;product=alpha/beta hydrolase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4207467 4208657 . - . ID=gene-NM058_21645;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=NM058_21645 CP101611.1 Protein Homology CDS 4207467 4208657 . - 0 ID=cds-UTX05282.1;Parent=gene-NM058_21645;Dbxref=NCBI_GP:UTX05282.1;Name=UTX05282.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387994.1;locus_tag=NM058_21645;product=elongation factor Tu;protein_id=UTX05282.1;transl_table=11 CP101611.1 Genbank gene 4208777 4210855 . - . ID=gene-NM058_21650;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=NM058_21650 CP101611.1 Protein Homology CDS 4208777 4210855 . - 0 ID=cds-UTX05283.1;Parent=gene-NM058_21650;Dbxref=NCBI_GP:UTX05283.1;Name=UTX05283.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000090364.1;locus_tag=NM058_21650;product=elongation factor G;protein_id=UTX05283.1;transl_table=11 CP101611.1 Genbank gene 4210908 4211378 . - . ID=gene-NM058_21655;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=NM058_21655 CP101611.1 Protein Homology CDS 4210908 4211378 . - 0 ID=cds-UTX05284.1;Parent=gene-NM058_21655;Dbxref=NCBI_GP:UTX05284.1;Name=UTX05284.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1;locus_tag=NM058_21655;product=30S ribosomal protein S7;protein_id=UTX05284.1;transl_table=11 CP101611.1 Genbank gene 4211420 4211836 . - . ID=gene-NM058_21660;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=NM058_21660 CP101611.1 Protein Homology CDS 4211420 4211836 . - 0 ID=cds-UTX05285.1;Parent=gene-NM058_21660;Dbxref=NCBI_GP:UTX05285.1;Name=UTX05285.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387991.2;locus_tag=NM058_21660;product=30S ribosomal protein S12;protein_id=UTX05285.1;transl_table=11 CP101611.1 Genbank gene 4211949 4212197 . - . ID=gene-NM058_21665;Name=NM058_21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21665 CP101611.1 Protein Homology CDS 4211949 4212197 . - 0 ID=cds-UTX05286.1;Parent=gene-NM058_21665;Dbxref=NCBI_GP:UTX05286.1;Name=UTX05286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387990.1;locus_tag=NM058_21665;product=50S ribosomal protein L7ae-like protein;protein_id=UTX05286.1;transl_table=11 CP101611.1 Genbank pseudogene 4212376 4215974 . - . ID=gene-NM058_21670;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=pseudogene;locus_tag=NM058_21670;pseudo=true CP101611.1 Protein Homology CDS 4212376 4215974 . - 0 ID=cds-NM058_21670;Parent=gene-NM058_21670;Note=frameshifted;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387989.2;locus_tag=NM058_21670;product=DNA-directed RNA polymerase subunit beta';pseudo=true;transl_table=11 CP101611.1 Genbank gene 4216036 4219617 . - . ID=gene-NM058_21675;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=NM058_21675 CP101611.1 Protein Homology CDS 4216036 4219617 . - 0 ID=cds-UTX05287.1;Parent=gene-NM058_21675;Dbxref=NCBI_GP:UTX05287.1;Name=UTX05287.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387988.2;locus_tag=NM058_21675;product=DNA-directed RNA polymerase subunit beta;protein_id=UTX05287.1;transl_table=11 CP101611.1 Genbank pseudogene 4219862 4220466 . - . ID=gene-NM058_21680;Name=NM058_21680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NM058_21680;pseudo=true CP101611.1 Protein Homology CDS 4219862 4220466 . - 0 ID=cds-NM058_21680;Parent=gene-NM058_21680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387987.1;locus_tag=NM058_21680;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4220556 4220927 . - . ID=gene-NM058_21685;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=NM058_21685 CP101611.1 Protein Homology CDS 4220556 4220927 . - 0 ID=cds-UTX05288.1;Parent=gene-NM058_21685;Dbxref=NCBI_GP:UTX05288.1;Name=UTX05288.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387986.1;locus_tag=NM058_21685;product=50S ribosomal protein L7/L12;protein_id=UTX05288.1;transl_table=11 CP101611.1 Genbank gene 4220973 4221473 . - . ID=gene-NM058_21690;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=NM058_21690 CP101611.1 Protein Homology CDS 4220973 4221473 . - 0 ID=cds-UTX05289.1;Parent=gene-NM058_21690;Dbxref=NCBI_GP:UTX05289.1;Name=UTX05289.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387985.2;locus_tag=NM058_21690;product=50S ribosomal protein L10;protein_id=UTX05289.1;transl_table=11 CP101611.1 cmsearch sequence_feature 4221539 4221679 . - . ID=id-CP101611.1:4221539..4221679;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP101611.1 Genbank gene 4221725 4222423 . - . ID=gene-NM058_21695;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=NM058_21695 CP101611.1 Protein Homology CDS 4221725 4222423 . - 0 ID=cds-UTX05290.1;Parent=gene-NM058_21695;Dbxref=NCBI_GP:UTX05290.1;Name=UTX05290.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387984.2;locus_tag=NM058_21695;product=50S ribosomal protein L1;protein_id=UTX05290.1;transl_table=11 CP101611.1 Genbank gene 4222518 4222943 . - . ID=gene-NM058_21700;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=NM058_21700 CP101611.1 Protein Homology CDS 4222518 4222943 . - 0 ID=cds-UTX05291.1;Parent=gene-NM058_21700;Dbxref=NCBI_GP:UTX05291.1;Name=UTX05291.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387983.2;locus_tag=NM058_21700;product=50S ribosomal protein L11;protein_id=UTX05291.1;transl_table=11 CP101611.1 Genbank gene 4223111 4223644 . - . ID=gene-NM058_21705;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=NM058_21705 CP101611.1 Protein Homology CDS 4223111 4223644 . - 0 ID=cds-UTX05292.1;Parent=gene-NM058_21705;Dbxref=NCBI_GP:UTX05292.1;Name=UTX05292.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription%2C termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387982.1;locus_tag=NM058_21705;product=transcription termination/antitermination protein NusG;protein_id=UTX05292.1;transl_table=11 CP101611.1 Genbank gene 4223828 4224007 . - . ID=gene-NM058_21710;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=NM058_21710 CP101611.1 Protein Homology CDS 4223828 4224007 . - 0 ID=cds-UTX05293.1;Parent=gene-NM058_21710;Dbxref=NCBI_GP:UTX05293.1;Name=UTX05293.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secE;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387981.1;locus_tag=NM058_21710;product=preprotein translocase subunit SecE;protein_id=UTX05293.1;transl_table=11 CP101611.1 Genbank gene 4224041 4224190 . - . ID=gene-NM058_21715;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=NM058_21715 CP101611.1 Protein Homology CDS 4224041 4224190 . - 0 ID=cds-UTX05294.1;Parent=gene-NM058_21715;Dbxref=NCBI_GP:UTX05294.1;Name=UTX05294.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387980.1;locus_tag=NM058_21715;product=50S ribosomal protein L33;protein_id=UTX05294.1;transl_table=11 CP101611.1 Genbank gene 4224282 4224938 . - . ID=gene-NM058_21720;Name=sigH;gbkey=Gene;gene=sigH;gene_biotype=protein_coding;locus_tag=NM058_21720 CP101611.1 Protein Homology CDS 4224282 4224938 . - 0 ID=cds-UTX05295.1;Parent=gene-NM058_21720;Dbxref=NCBI_GP:UTX05295.1;Name=UTX05295.1;Ontology_term=GO:0006352,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=sigH;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387979.1;locus_tag=NM058_21720;product=RNA polymerase sporulation sigma factor SigH;protein_id=UTX05295.1;transl_table=11 CP101611.1 Genbank pseudogene 4225001 4225512 . - . ID=gene-NM058_21725;Name=rae1;gbkey=Gene;gene=rae1;gene_biotype=pseudogene;locus_tag=NM058_21725;pseudo=true CP101611.1 Protein Homology CDS 4225001 4225512 . - 0 ID=cds-NM058_21725;Parent=gene-NM058_21725;Note=frameshifted;gbkey=CDS;gene=rae1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387978.1;locus_tag=NM058_21725;product=ribosome-dependent mRNA decay endonuclease Rae1/YacP;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 4225519 4226267 . - . ID=gene-NM058_21730;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=pseudogene;locus_tag=NM058_21730;pseudo=true CP101611.1 Protein Homology CDS 4225519 4226267 . - 0 ID=cds-NM058_21730;Parent=gene-NM058_21730;Note=frameshifted;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387977.1;locus_tag=NM058_21730;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4226251 4226682 . - . ID=gene-NM058_21735;Name=NM058_21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21735 CP101611.1 Protein Homology CDS 4226251 4226682 . - 0 ID=cds-UTX05296.1;Parent=gene-NM058_21735;Dbxref=NCBI_GP:UTX05296.1;Name=UTX05296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387976.1;locus_tag=NM058_21735;product=mini-ribonuclease 3;protein_id=UTX05296.1;transl_table=11 CP101611.1 Genbank gene 4226686 4228086 . - . ID=gene-NM058_21740;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=NM058_21740 CP101611.1 Protein Homology CDS 4226686 4228086 . - 0 ID=cds-UTX05297.1;Parent=gene-NM058_21740;Dbxref=NCBI_GP:UTX05297.1;Name=UTX05297.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387975.1;locus_tag=NM058_21740;product=cysteine--tRNA ligase;protein_id=UTX05297.1;transl_table=11 CP101611.1 Genbank pseudogene 4228083 4228735 . - . ID=gene-NM058_21745;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=pseudogene;locus_tag=NM058_21745;pseudo=true CP101611.1 Protein Homology CDS 4228083 4228735 . - 0 ID=cds-NM058_21745;Parent=gene-NM058_21745;Note=frameshifted;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387974.1;locus_tag=NM058_21745;product=serine O-acetyltransferase;pseudo=true;transl_table=11 CP101611.1 cmsearch binding_site 4228805 4229036 . - . ID=id-CP101611.1:4228805..4229036;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 CP101611.1 Genbank gene 4229039 4230490 . - . ID=gene-NM058_21750;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=NM058_21750 CP101611.1 Protein Homology CDS 4229039 4230490 . - 0 ID=cds-UTX05298.1;Parent=gene-NM058_21750;Dbxref=NCBI_GP:UTX05298.1;Name=UTX05298.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387973.1;locus_tag=NM058_21750;product=glutamate--tRNA ligase;protein_id=UTX05298.1;transl_table=11 CP101611.1 Genbank gene 4230581 4231054 . - . ID=gene-NM058_21755;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=NM058_21755 CP101611.1 Protein Homology CDS 4230581 4231054 . - 0 ID=cds-UTX05299.1;Parent=gene-NM058_21755;Dbxref=NCBI_GP:UTX05299.1;Name=UTX05299.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387972.1;locus_tag=NM058_21755;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=UTX05299.1;transl_table=11 CP101611.1 Genbank gene 4231047 4231745 . - . ID=gene-NM058_21760;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=NM058_21760 CP101611.1 Protein Homology CDS 4231047 4231745 . - 0 ID=cds-UTX05300.1;Parent=gene-NM058_21760;Dbxref=NCBI_GP:UTX05300.1;Name=UTX05300.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387971.1;locus_tag=NM058_21760;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=UTX05300.1;transl_table=11 CP101611.1 Genbank gene 4231760 4232860 . - . ID=gene-NM058_21765;Name=NM058_21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21765 CP101611.1 Protein Homology CDS 4231760 4232860 . - 0 ID=cds-UTX05301.1;Parent=gene-NM058_21765;Dbxref=NCBI_GP:UTX05301.1;Name=UTX05301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387970.1;locus_tag=NM058_21765;product=PIN/TRAM domain-containing protein;protein_id=UTX05301.1;transl_table=11 CP101611.1 Genbank gene 4232975 4234057 . - . ID=gene-NM058_21770;Name=disA;gbkey=Gene;gene=disA;gene_biotype=protein_coding;locus_tag=NM058_21770 CP101611.1 Protein Homology CDS 4232975 4234057 . - 0 ID=cds-UTX05302.1;Parent=gene-NM058_21770;Dbxref=NCBI_GP:UTX05302.1;Name=UTX05302.1;gbkey=CDS;gene=disA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387969.1;locus_tag=NM058_21770;product=DNA integrity scanning diadenylate cyclase DisA;protein_id=UTX05302.1;transl_table=11 CP101611.1 Genbank pseudogene 4234061 4235435 . - . ID=gene-NM058_21775;Name=radA;gbkey=Gene;gene=radA;gene_biotype=pseudogene;locus_tag=NM058_21775;pseudo=true CP101611.1 Protein Homology CDS 4234061 4235435 . - 0 ID=cds-NM058_21775;Parent=gene-NM058_21775;Note=frameshifted;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387968.1;locus_tag=NM058_21775;product=DNA repair protein RadA;pseudo=true;transl_table=11 CP101611.1 Genbank pseudogene 4235526 4237957 . - . ID=gene-NM058_21780;Name=clpC;gbkey=Gene;gene=clpC;gene_biotype=pseudogene;gene_synonym=mecB;locus_tag=NM058_21780;pseudo=true CP101611.1 Protein Homology CDS 4235526 4237957 . - 0 ID=cds-NM058_21780;Parent=gene-NM058_21780;Note=frameshifted;gbkey=CDS;gene=clpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387967.1;locus_tag=NM058_21780;product=ATP-dependent protease ATP-binding subunit ClpC;pseudo=true;transl_table=11 CP101611.1 Genbank gene 4237954 4239045 . - . ID=gene-NM058_21785;Name=NM058_21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NM058_21785 CP101611.1 Protein Homology CDS 4237954 4239045 . - 0 ID=cds-UTX05303.1;Parent=gene-NM058_21785;Dbxref=NCBI_GP:UTX05303.1;Name=UTX05303.1;Ontology_term=GO:0046314,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=phosphocreatine biosynthetic process|0046314||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387966.1;locus_tag=NM058_21785;product=protein arginine kinase;protein_id=UTX05303.1;transl_table=11 CP101611.1 Genbank gene 4239045 4239602 . - . ID=gene-NM058_21790;Name=mcsA;gbkey=Gene;gene=mcsA;gene_biotype=protein_coding;locus_tag=NM058_21790 CP101611.1 Protein Homology CDS 4239045 4239602 . - 0 ID=cds-UTX05304.1;Parent=gene-NM058_21790;Dbxref=NCBI_GP:UTX05304.1;Name=UTX05304.1;gbkey=CDS;gene=mcsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387965.1;locus_tag=NM058_21790;product=protein-arginine kinase activator protein McsA;protein_id=UTX05304.1;transl_table=11 CP101611.1 Genbank gene 4239616 4240080 . - . ID=gene-NM058_21795;Name=ctsR;gbkey=Gene;gene=ctsR;gene_biotype=protein_coding;locus_tag=NM058_21795 CP101611.1 Protein Homology CDS 4239616 4240080 . - 0 ID=cds-UTX05305.1;Parent=gene-NM058_21795;Dbxref=NCBI_GP:UTX05305.1;Name=UTX05305.1;gbkey=CDS;gene=ctsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_387964.1;locus_tag=NM058_21795;product=transcriptional regulator CtsR;protein_id=UTX05305.1;transl_table=11 ###