N288_16645 c0190c9034f25ba755f7835e4af54d73 361 Gene3D G3DSA:3.40.47.10 1 212 5.6E-63 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_16645 c0190c9034f25ba755f7835e4af54d73 361 Gene3D G3DSA:3.40.47.10 220 359 9.6E-42 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_16645 c0190c9034f25ba755f7835e4af54d73 361 PIRSF PIRSF000451 1 361 9.3E-122 T 12-10-2018 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 N288_16645 c0190c9034f25ba755f7835e4af54d73 361 SUPERFAMILY SSF53901 4 360 3.63E-47 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_16645 c0190c9034f25ba755f7835e4af54d73 361 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 226 359 1.2E-18 T 12-10-2018 IPR012328 Chalcone/stilbene synthase, C-terminal N288_16645 c0190c9034f25ba755f7835e4af54d73 361 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 9 206 4.7E-16 T 12-10-2018 IPR001099 Chalcone/stilbene synthase, N-terminal N288_06625 d38a80870e6848f5239afc094a9a97a2 369 Pfam PF00005 ABC transporter 21 162 2.2E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_06625 d38a80870e6848f5239afc094a9a97a2 369 SMART SM00382 29 212 6.2E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_06625 d38a80870e6848f5239afc094a9a97a2 369 SUPERFAMILY SSF50331 237 365 6.07E-30 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal N288_06625 d38a80870e6848f5239afc094a9a97a2 369 Gene3D G3DSA:3.40.50.300 1 239 2.7E-76 T 12-10-2018 N288_06625 d38a80870e6848f5239afc094a9a97a2 369 Gene3D G3DSA:2.40.50.140 303 348 1.1E-36 T 12-10-2018 N288_06625 d38a80870e6848f5239afc094a9a97a2 369 SUPERFAMILY SSF52540 4 243 2.88E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_06625 d38a80870e6848f5239afc094a9a97a2 369 Pfam PF03459 TOBE domain 302 355 4.7E-9 T 12-10-2018 IPR005116 Transport-associated OB, type 1 N288_06625 d38a80870e6848f5239afc094a9a97a2 369 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_06625 d38a80870e6848f5239afc094a9a97a2 369 Gene3D G3DSA:2.40.50.100 240 361 1.1E-36 T 12-10-2018 N288_06780 61fc54ee331755e990b19b7ec6036e8a 314 Hamap MF_01427 3'-5' exoribonuclease YhaM [yhaM]. 1 313 62.393 T 12-10-2018 IPR020873 3'-5' exoribonuclease YhaM GO:0000175 N288_06780 61fc54ee331755e990b19b7ec6036e8a 314 Pfam PF01966 HD domain 161 278 1.0E-10 T 12-10-2018 IPR006674 HD domain N288_06780 61fc54ee331755e990b19b7ec6036e8a 314 Gene3D G3DSA:1.10.3210.10 123 293 9.4E-11 T 12-10-2018 N288_06780 61fc54ee331755e990b19b7ec6036e8a 314 SMART SM00471 156 288 2.9E-6 T 12-10-2018 IPR003607 HD/PDEase domain N288_06780 61fc54ee331755e990b19b7ec6036e8a 314 Gene3D G3DSA:2.40.50.140 25 98 1.8E-5 T 12-10-2018 N288_06780 61fc54ee331755e990b19b7ec6036e8a 314 SUPERFAMILY SSF50249 31 94 3.77E-6 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_06780 61fc54ee331755e990b19b7ec6036e8a 314 SUPERFAMILY SSF109604 142 279 1.82E-14 T 12-10-2018 N288_15105 486bf562bdf32a33f2156342e9de98a1 421 SMART SM00387 306 413 1.8E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_15105 486bf562bdf32a33f2156342e9de98a1 421 Gene3D G3DSA:1.10.287.130 186 262 5.8E-18 T 12-10-2018 N288_15105 486bf562bdf32a33f2156342e9de98a1 421 Pfam PF00512 His Kinase A (phospho-acceptor) domain 202 261 3.1E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_15105 486bf562bdf32a33f2156342e9de98a1 421 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 306 410 8.4E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_15105 486bf562bdf32a33f2156342e9de98a1 421 SMART SM00388 199 265 5.6E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_15105 486bf562bdf32a33f2156342e9de98a1 421 SUPERFAMILY SSF55874 257 415 2.1E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_15105 486bf562bdf32a33f2156342e9de98a1 421 Gene3D G3DSA:3.30.565.10 263 411 5.6E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_15105 486bf562bdf32a33f2156342e9de98a1 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 357 2.0E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_15105 486bf562bdf32a33f2156342e9de98a1 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 2.0E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_15105 486bf562bdf32a33f2156342e9de98a1 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 410 2.0E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_15105 486bf562bdf32a33f2156342e9de98a1 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 371 2.0E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_15105 486bf562bdf32a33f2156342e9de98a1 421 SUPERFAMILY SSF47384 195 262 6.67E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_25885 3de3d5a3768366d0fb5d733698fcf075 333 Gene3D G3DSA:1.10.287.130 51 174 1.9E-15 T 12-10-2018 N288_25885 3de3d5a3768366d0fb5d733698fcf075 333 SUPERFAMILY SSF55874 168 328 6.68E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_25885 3de3d5a3768366d0fb5d733698fcf075 333 Pfam PF00512 His Kinase A (phospho-acceptor) domain 113 178 2.6E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_25885 3de3d5a3768366d0fb5d733698fcf075 333 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 224 328 6.0E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_25885 3de3d5a3768366d0fb5d733698fcf075 333 SMART SM00388 112 178 3.6E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_25885 3de3d5a3768366d0fb5d733698fcf075 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 278 288 5.8E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_25885 3de3d5a3768366d0fb5d733698fcf075 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 260 274 5.8E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_25885 3de3d5a3768366d0fb5d733698fcf075 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 329 5.8E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_25885 3de3d5a3768366d0fb5d733698fcf075 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 310 5.8E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_25885 3de3d5a3768366d0fb5d733698fcf075 333 SMART SM00387 223 332 4.3E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_25885 3de3d5a3768366d0fb5d733698fcf075 333 SUPERFAMILY SSF47384 110 178 2.94E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_25885 3de3d5a3768366d0fb5d733698fcf075 333 Gene3D G3DSA:3.30.565.10 180 332 1.1E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_23595 08d2e6d6cf7d26be634fb586f9028bb0 535 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 21 527 2.7E-110 T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 N288_23595 08d2e6d6cf7d26be634fb586f9028bb0 535 SUPERFAMILY SSF56235 6 534 6.75E-184 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_23595 08d2e6d6cf7d26be634fb586f9028bb0 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 433 450 4.2E-45 T 12-10-2018 N288_23595 08d2e6d6cf7d26be634fb586f9028bb0 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 409 424 4.2E-45 T 12-10-2018 N288_23595 08d2e6d6cf7d26be634fb586f9028bb0 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 130 149 4.2E-45 T 12-10-2018 N288_23595 08d2e6d6cf7d26be634fb586f9028bb0 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 378 396 4.2E-45 T 12-10-2018 N288_23595 08d2e6d6cf7d26be634fb586f9028bb0 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 112 130 4.2E-45 T 12-10-2018 N288_23595 08d2e6d6cf7d26be634fb586f9028bb0 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 234 250 4.2E-45 T 12-10-2018 N288_23595 08d2e6d6cf7d26be634fb586f9028bb0 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 354 372 4.2E-45 T 12-10-2018 N288_23595 08d2e6d6cf7d26be634fb586f9028bb0 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 263 282 4.2E-45 T 12-10-2018 N288_23595 08d2e6d6cf7d26be634fb586f9028bb0 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 43 68 4.2E-45 T 12-10-2018 N288_23595 08d2e6d6cf7d26be634fb586f9028bb0 535 Gene3D G3DSA:1.10.246.130 250 353 6.2E-26 T 12-10-2018 N288_23595 08d2e6d6cf7d26be634fb586f9028bb0 535 Pfam PF01019 Gamma-glutamyltranspeptidase 36 530 2.6E-162 T 12-10-2018 N288_23595 08d2e6d6cf7d26be634fb586f9028bb0 535 Gene3D G3DSA:3.60.20.40 354 535 5.0E-69 T 12-10-2018 N288_06665 7cc380a851fbc1fe6f86d830aaf7d18d 468 SUPERFAMILY SSF56059 235 448 2.08E-12 T 12-10-2018 N288_06665 7cc380a851fbc1fe6f86d830aaf7d18d 468 Pfam PF14398 YheC/D like ATP-grasp 208 461 2.7E-74 T 12-10-2018 IPR026838 Endospore coat-associated protein YheC/D N288_06665 7cc380a851fbc1fe6f86d830aaf7d18d 468 Gene3D G3DSA:3.30.470.20 329 459 1.3E-10 T 12-10-2018 N288_18965 14a6deb25665b602fa7f0a5bb0b2d1a5 180 Gene3D G3DSA:3.30.1340.20 74 178 1.4E-36 T 12-10-2018 IPR035922 3H domain superfamily N288_18965 14a6deb25665b602fa7f0a5bb0b2d1a5 180 SUPERFAMILY SSF75500 76 178 1.44E-34 T 12-10-2018 IPR035922 3H domain superfamily N288_18965 14a6deb25665b602fa7f0a5bb0b2d1a5 180 Pfam PF08279 HTH domain 12 64 1.6E-12 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 N288_18965 14a6deb25665b602fa7f0a5bb0b2d1a5 180 Gene3D G3DSA:1.10.10.10 1 67 3.4E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_18965 14a6deb25665b602fa7f0a5bb0b2d1a5 180 PIRSF PIRSF037847 7 178 2.2E-65 T 12-10-2018 IPR026043 Transcription repressor NadR N288_18965 14a6deb25665b602fa7f0a5bb0b2d1a5 180 Pfam PF02829 3H domain 80 176 3.2E-35 T 12-10-2018 IPR004173 3H domain GO:0036094 N288_18965 14a6deb25665b602fa7f0a5bb0b2d1a5 180 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 84 177 1.0E-30 T 12-10-2018 IPR004173 3H domain GO:0036094 N288_18965 14a6deb25665b602fa7f0a5bb0b2d1a5 180 SUPERFAMILY SSF46785 8 66 1.24E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_20445 7fac62b1422997574847f285ca298266 342 Gene3D G3DSA:2.160.10.10 237 336 3.6E-28 T 12-10-2018 N288_20445 7fac62b1422997574847f285ca298266 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 288 321 6.3E-5 T 12-10-2018 IPR001451 Hexapeptide repeat N288_20445 7fac62b1422997574847f285ca298266 342 SUPERFAMILY SSF51161 246 325 5.74E-16 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily N288_20445 7fac62b1422997574847f285ca298266 342 Gene3D G3DSA:3.90.550.10 1 150 3.5E-20 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_20445 7fac62b1422997574847f285ca298266 342 Gene3D G3DSA:3.90.550.10 151 236 1.5E-9 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_20445 7fac62b1422997574847f285ca298266 342 Pfam PF00483 Nucleotidyl transferase 28 147 4.9E-6 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 N288_20445 7fac62b1422997574847f285ca298266 342 SUPERFAMILY SSF53448 24 301 9.37E-37 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_24045 61aeb4f202fdd33940e16d929907c054 325 Gene3D G3DSA:3.40.50.10750 142 295 1.6E-132 T 12-10-2018 N288_24045 61aeb4f202fdd33940e16d929907c054 325 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 19 319 9.8E-124 T 12-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 N288_24045 61aeb4f202fdd33940e16d929907c054 325 Gene3D G3DSA:3.40.50.10950 18 319 1.6E-132 T 12-10-2018 N288_24045 61aeb4f202fdd33940e16d929907c054 325 PIRSF PIRSF000428 1 325 1.7E-110 T 12-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 N288_24045 61aeb4f202fdd33940e16d929907c054 325 Pfam PF01515 Phosphate acetyl/butaryl transferase 6 319 2.9E-128 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 N288_24045 61aeb4f202fdd33940e16d929907c054 325 SUPERFAMILY SSF53659 4 322 6.99E-96 T 12-10-2018 N288_19235 b7878b6701abfe50e6f246de2d721759 778 Gene3D G3DSA:3.40.50.300 311 489 4.6E-69 T 12-10-2018 N288_19235 b7878b6701abfe50e6f246de2d721759 778 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 350 487 6.3E-24 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 N288_19235 b7878b6701abfe50e6f246de2d721759 778 SUPERFAMILY SSF88697 9 198 6.71E-45 T 12-10-2018 IPR015947 PUA-like superfamily N288_19235 b7878b6701abfe50e6f246de2d721759 778 Gene3D G3DSA:3.30.230.10 591 778 3.3E-86 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup N288_19235 b7878b6701abfe50e6f246de2d721759 778 PIRSF PIRSF001174 1 773 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 N288_19235 b7878b6701abfe50e6f246de2d721759 778 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 674 682 - T 12-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 N288_19235 b7878b6701abfe50e6f246de2d721759 778 SMART SM00382 346 494 5.1E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_19235 b7878b6701abfe50e6f246de2d721759 778 SMART SM00464 8 200 2.4E-68 T 12-10-2018 IPR003111 Lon, substrate-binding domain N288_19235 b7878b6701abfe50e6f246de2d721759 778 Gene3D G3DSA:1.20.58.1480 119 243 1.1E-42 T 12-10-2018 N288_19235 b7878b6701abfe50e6f246de2d721759 778 Gene3D G3DSA:1.10.8.60 490 582 5.2E-34 T 12-10-2018 N288_19235 b7878b6701abfe50e6f246de2d721759 778 SUPERFAMILY SSF52540 311 586 3.11E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_19235 b7878b6701abfe50e6f246de2d721759 778 Gene3D G3DSA:2.30.130.40 4 114 2.0E-29 T 12-10-2018 N288_19235 b7878b6701abfe50e6f246de2d721759 778 Hamap MF_01973 Lon protease [lon]. 9 770 72.419 T 12-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 N288_19235 b7878b6701abfe50e6f246de2d721759 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 593 609 7.3E-53 T 12-10-2018 N288_19235 b7878b6701abfe50e6f246de2d721759 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 671 690 7.3E-53 T 12-10-2018 N288_19235 b7878b6701abfe50e6f246de2d721759 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 724 742 7.3E-53 T 12-10-2018 N288_19235 b7878b6701abfe50e6f246de2d721759 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 354 373 7.3E-53 T 12-10-2018 N288_19235 b7878b6701abfe50e6f246de2d721759 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 701 720 7.3E-53 T 12-10-2018 N288_19235 b7878b6701abfe50e6f246de2d721759 778 TIGRFAM TIGR00763 lon: endopeptidase La 10 769 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 N288_19235 b7878b6701abfe50e6f246de2d721759 778 SUPERFAMILY SSF54211 593 768 6.83E-56 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_19235 b7878b6701abfe50e6f246de2d721759 778 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 9 198 6.1E-43 T 12-10-2018 IPR003111 Lon, substrate-binding domain N288_19235 b7878b6701abfe50e6f246de2d721759 778 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 568 770 1.0E-98 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 N288_23010 a8062f9ca558a5d279e72d6e146adea7 859 Gene3D G3DSA:3.20.110.10 2 269 2.0E-76 T 12-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily N288_23010 a8062f9ca558a5d279e72d6e146adea7 859 Gene3D G3DSA:1.20.1270.50 277 369 2.5E-26 T 12-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 N288_23010 a8062f9ca558a5d279e72d6e146adea7 859 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 462 843 2.5E-12 T 12-10-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 N288_23010 a8062f9ca558a5d279e72d6e146adea7 859 SUPERFAMILY SSF88713 3 254 1.19E-39 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 N288_23010 a8062f9ca558a5d279e72d6e146adea7 859 SUPERFAMILY SSF88688 277 364 6.87E-11 T 12-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily N288_23010 a8062f9ca558a5d279e72d6e146adea7 859 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 7 255 2.6E-30 T 12-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 N288_23010 a8062f9ca558a5d279e72d6e146adea7 859 SUPERFAMILY SSF74650 370 850 1.16E-42 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 N288_23010 a8062f9ca558a5d279e72d6e146adea7 859 SMART SM00872 278 349 3.2E-11 T 12-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 N288_23010 a8062f9ca558a5d279e72d6e146adea7 859 Pfam PF09261 Alpha mannosidase middle domain 277 348 3.8E-8 T 12-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 N288_23010 a8062f9ca558a5d279e72d6e146adea7 859 Gene3D G3DSA:2.70.98.30 474 749 6.9E-60 T 12-10-2018 N288_18890 c46238638bcab0c0ffb65c297802b0ff 379 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 368 57.722 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 N288_18890 c46238638bcab0c0ffb65c297802b0ff 379 Gene3D G3DSA:3.20.20.105 2 373 4.4E-171 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 N288_18890 c46238638bcab0c0ffb65c297802b0ff 379 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 373 7.1E-187 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 N288_18890 c46238638bcab0c0ffb65c297802b0ff 379 Pfam PF01702 Queuine tRNA-ribosyltransferase 132 365 4.7E-92 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 N288_18890 c46238638bcab0c0ffb65c297802b0ff 379 SUPERFAMILY SSF51713 3 369 2.62E-162 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 N288_18890 c46238638bcab0c0ffb65c297802b0ff 379 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 373 7.3E-176 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 N288_02325 23ad79b4d14e699d7d4d11ef5bacbdf9 362 Pfam PF00107 Zinc-binding dehydrogenase 194 320 1.8E-29 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 N288_02325 23ad79b4d14e699d7d4d11ef5bacbdf9 362 Gene3D G3DSA:3.40.50.720 171 305 6.2E-138 T 12-10-2018 N288_02325 23ad79b4d14e699d7d4d11ef5bacbdf9 362 SUPERFAMILY SSF50129 1 190 2.59E-61 T 12-10-2018 IPR011032 GroES-like superfamily N288_02325 23ad79b4d14e699d7d4d11ef5bacbdf9 362 SUPERFAMILY SSF51735 157 326 6.8E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_02325 23ad79b4d14e699d7d4d11ef5bacbdf9 362 SMART SM00829 10 359 8.3E-6 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 N288_02325 23ad79b4d14e699d7d4d11ef5bacbdf9 362 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 N288_02325 23ad79b4d14e699d7d4d11ef5bacbdf9 362 Gene3D G3DSA:3.90.180.10 7 356 6.2E-138 T 12-10-2018 N288_02325 23ad79b4d14e699d7d4d11ef5bacbdf9 362 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 151 2.4E-23 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 N288_18800 e5e9b7792e2e2274ab049e9330f0b33a 160 SUPERFAMILY SSF46689 4 59 9.36E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_18800 e5e9b7792e2e2274ab049e9330f0b33a 160 Pfam PF00249 Myb-like DNA-binding domain 6 56 5.1E-6 T 12-10-2018 IPR001005 SANT/Myb domain N288_18800 e5e9b7792e2e2274ab049e9330f0b33a 160 SMART SM00717 4 58 0.0067 T 12-10-2018 IPR001005 SANT/Myb domain N288_18800 e5e9b7792e2e2274ab049e9330f0b33a 160 Gene3D G3DSA:1.10.10.60 1 55 4.8E-8 T 12-10-2018 N288_04350 f9e299cf0dc351aaed7340d1e7f45264 255 SMART SM00382 26 213 1.3E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_04350 f9e299cf0dc351aaed7340d1e7f45264 255 Gene3D G3DSA:3.40.50.300 1 252 2.4E-69 T 12-10-2018 N288_04350 f9e299cf0dc351aaed7340d1e7f45264 255 SUPERFAMILY SSF52540 1 228 3.55E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_04350 f9e299cf0dc351aaed7340d1e7f45264 255 Pfam PF00005 ABC transporter 18 164 1.7E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_04350 f9e299cf0dc351aaed7340d1e7f45264 255 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_10505 f2a419280a537e02112ef480ab5e629a 324 Pfam PF01380 SIS domain 22 126 3.7E-14 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 N288_10505 f2a419280a537e02112ef480ab5e629a 324 Gene3D G3DSA:3.40.50.12570 189 282 6.7E-55 T 12-10-2018 N288_10505 f2a419280a537e02112ef480ab5e629a 324 SUPERFAMILY SSF53697 5 324 8.63E-55 T 12-10-2018 N288_10505 f2a419280a537e02112ef480ab5e629a 324 PIRSF PIRSF009290 2 324 1.2E-76 T 12-10-2018 IPR024713 Fructosamine deglycase FrlB N288_10505 f2a419280a537e02112ef480ab5e629a 324 Gene3D G3DSA:3.40.50.10490 2 147 1.5E-36 T 12-10-2018 N288_10505 f2a419280a537e02112ef480ab5e629a 324 Gene3D G3DSA:1.10.10.2240 157 306 6.7E-55 T 12-10-2018 N288_12990 a493126a4a8ec01d5a492db50f279fb9 140 Gene3D G3DSA:2.20.25.10 1 43 1.0E-18 T 12-10-2018 N288_12990 a493126a4a8ec01d5a492db50f279fb9 140 SUPERFAMILY SSF82784 1 137 2.22E-41 T 12-10-2018 IPR036102 OsmC/Ohr superfamily N288_12990 a493126a4a8ec01d5a492db50f279fb9 140 Gene3D G3DSA:3.30.300.20 46 139 2.1E-31 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta N288_12990 a493126a4a8ec01d5a492db50f279fb9 140 Pfam PF02566 OsmC-like protein 40 135 6.0E-17 T 12-10-2018 IPR003718 OsmC/Ohr family N288_12990 a493126a4a8ec01d5a492db50f279fb9 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 136 4.2E-53 T 12-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 N288_07575 4e35f2c2e2d5cee7176f017869a9d945 341 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_07575 4e35f2c2e2d5cee7176f017869a9d945 341 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 309 7.1E-21 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_07575 4e35f2c2e2d5cee7176f017869a9d945 341 SMART SM00382 42 242 5.8E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_07575 4e35f2c2e2d5cee7176f017869a9d945 341 Pfam PF00005 ABC transporter 33 192 6.8E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_07575 4e35f2c2e2d5cee7176f017869a9d945 341 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 328 1.1E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_07575 4e35f2c2e2d5cee7176f017869a9d945 341 Gene3D G3DSA:3.40.50.300 11 339 1.3E-98 T 12-10-2018 N288_07575 4e35f2c2e2d5cee7176f017869a9d945 341 SUPERFAMILY SSF52540 13 263 2.38E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_17225 111ab978b8c7312c20e1602b946debd3 499 SUPERFAMILY SSF52540 60 342 1.29E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_17225 111ab978b8c7312c20e1602b946debd3 499 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 134 143 - T 12-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site N288_17225 111ab978b8c7312c20e1602b946debd3 499 SMART SM00490 245 327 7.6E-26 T 12-10-2018 IPR001650 Helicase, C-terminal N288_17225 111ab978b8c7312c20e1602b946debd3 499 Gene3D G3DSA:3.40.50.300 1 201 2.7E-68 T 12-10-2018 N288_17225 111ab978b8c7312c20e1602b946debd3 499 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 11 347 2.6E-106 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 N288_17225 111ab978b8c7312c20e1602b946debd3 499 Pfam PF00271 Helicase conserved C-terminal domain 223 326 8.0E-19 T 12-10-2018 IPR001650 Helicase, C-terminal N288_17225 111ab978b8c7312c20e1602b946debd3 499 SMART SM00487 16 211 1.6E-25 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_17225 111ab978b8c7312c20e1602b946debd3 499 Pfam PF00270 DEAD/DEAH box helicase 23 184 1.9E-17 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 N288_15525 91f08d4bc0964ee5720a4bd64df1f7f8 793 SMART SM00052 534 780 1.4E-109 T 12-10-2018 IPR001633 EAL domain N288_15525 91f08d4bc0964ee5720a4bd64df1f7f8 793 Pfam PF00990 Diguanylate cyclase, GGDEF domain 371 511 1.9E-20 T 12-10-2018 IPR000160 GGDEF domain N288_15525 91f08d4bc0964ee5720a4bd64df1f7f8 793 SUPERFAMILY SSF141868 539 783 2.75E-86 T 12-10-2018 IPR035919 EAL domain superfamily N288_15525 91f08d4bc0964ee5720a4bd64df1f7f8 793 Gene3D G3DSA:3.30.70.270 364 536 7.8E-31 T 12-10-2018 N288_15525 91f08d4bc0964ee5720a4bd64df1f7f8 793 SUPERFAMILY SSF55785 239 357 1.62E-22 T 12-10-2018 IPR035965 PAS domain superfamily N288_15525 91f08d4bc0964ee5720a4bd64df1f7f8 793 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 369 512 2.6E-15 T 12-10-2018 IPR000160 GGDEF domain N288_15525 91f08d4bc0964ee5720a4bd64df1f7f8 793 Pfam PF00563 EAL domain 540 775 3.5E-72 T 12-10-2018 IPR001633 EAL domain N288_15525 91f08d4bc0964ee5720a4bd64df1f7f8 793 SMART SM00091 247 313 2.6E-9 T 12-10-2018 IPR000014 PAS domain N288_15525 91f08d4bc0964ee5720a4bd64df1f7f8 793 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 243 365 4.6E-24 T 12-10-2018 IPR000014 PAS domain N288_15525 91f08d4bc0964ee5720a4bd64df1f7f8 793 Gene3D G3DSA:3.20.20.450 537 787 6.7E-96 T 12-10-2018 IPR035919 EAL domain superfamily N288_15525 91f08d4bc0964ee5720a4bd64df1f7f8 793 SUPERFAMILY SSF55073 375 524 3.3E-26 T 12-10-2018 IPR029787 Nucleotide cyclase N288_15525 91f08d4bc0964ee5720a4bd64df1f7f8 793 Pfam PF13426 PAS domain 257 358 6.3E-14 T 12-10-2018 IPR000014 PAS domain N288_15525 91f08d4bc0964ee5720a4bd64df1f7f8 793 SMART SM00267 359 522 1.2E-19 T 12-10-2018 IPR000160 GGDEF domain N288_15525 91f08d4bc0964ee5720a4bd64df1f7f8 793 Gene3D G3DSA:3.30.450.20 235 357 5.2E-24 T 12-10-2018 N288_23965 0341d37232c75e7fb250f1c4cacbc794 318 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 1 301 1.3E-107 T 12-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 N288_23965 0341d37232c75e7fb250f1c4cacbc794 318 Hamap MF_00606 UV DNA damage endonuclease [uvsE]. 12 303 36.503 T 12-10-2018 IPR023520 UV-endonuclease UvdE, bacterial GO:0004519|GO:0009411 N288_23965 0341d37232c75e7fb250f1c4cacbc794 318 Gene3D G3DSA:3.20.20.150 2 307 2.5E-96 T 12-10-2018 N288_23965 0341d37232c75e7fb250f1c4cacbc794 318 Pfam PF03851 UV-endonuclease UvdE 5 272 2.0E-104 T 12-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 N288_23965 0341d37232c75e7fb250f1c4cacbc794 318 SUPERFAMILY SSF51658 83 253 8.78E-17 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily N288_04260 69fb153b0aa27140a074948c40834bba 218 Pfam PF03575 Peptidase family S51 42 199 3.8E-12 T 12-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 N288_04260 69fb153b0aa27140a074948c40834bba 218 SUPERFAMILY SSF52317 49 206 5.95E-9 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_04260 69fb153b0aa27140a074948c40834bba 218 Gene3D G3DSA:3.40.50.880 10 200 6.6E-22 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_10355 1bb8a674402b575373894fdd93fbab65 666 Gene3D G3DSA:3.40.50.970 6 331 2.6E-127 T 12-10-2018 N288_10355 1bb8a674402b575373894fdd93fbab65 666 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 N288_10355 1bb8a674402b575373894fdd93fbab65 666 SUPERFAMILY SSF52922 535 666 8.51E-40 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 N288_10355 1bb8a674402b575373894fdd93fbab65 666 SMART SM00861 355 526 9.6E-72 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain N288_10355 1bb8a674402b575373894fdd93fbab65 666 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 339 3.6E-153 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 N288_10355 1bb8a674402b575373894fdd93fbab65 666 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 N288_10355 1bb8a674402b575373894fdd93fbab65 666 Pfam PF02780 Transketolase, C-terminal domain 551 658 1.0E-9 T 12-10-2018 IPR033248 Transketolase, C-terminal domain N288_10355 1bb8a674402b575373894fdd93fbab65 666 Gene3D G3DSA:3.40.50.970 332 539 8.3E-81 T 12-10-2018 N288_10355 1bb8a674402b575373894fdd93fbab65 666 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 665 2.6E-301 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 N288_10355 1bb8a674402b575373894fdd93fbab65 666 Gene3D G3DSA:3.40.50.920 541 666 1.7E-41 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 N288_10355 1bb8a674402b575373894fdd93fbab65 666 SUPERFAMILY SSF52518 5 326 9.09E-118 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_10355 1bb8a674402b575373894fdd93fbab65 666 Pfam PF02779 Transketolase, pyrimidine binding domain 355 525 9.5E-47 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain N288_10355 1bb8a674402b575373894fdd93fbab65 666 SUPERFAMILY SSF52518 342 528 1.13E-69 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_06450 4847c11cb2f6305372deeac1cd04544f 233 SUPERFAMILY SSF46894 126 225 2.78E-30 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_06450 4847c11cb2f6305372deeac1cd04544f 233 Gene3D G3DSA:3.40.50.2300 1 130 7.7E-38 T 12-10-2018 N288_06450 4847c11cb2f6305372deeac1cd04544f 233 SMART SM00448 1 111 3.5E-42 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_06450 4847c11cb2f6305372deeac1cd04544f 233 SMART SM00862 149 224 3.9E-31 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_06450 4847c11cb2f6305372deeac1cd04544f 233 Gene3D G3DSA:1.10.10.10 131 232 2.1E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_06450 4847c11cb2f6305372deeac1cd04544f 233 SUPERFAMILY SSF52172 1 127 1.42E-40 T 12-10-2018 IPR011006 CheY-like superfamily N288_06450 4847c11cb2f6305372deeac1cd04544f 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 224 1.3E-29 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_06450 4847c11cb2f6305372deeac1cd04544f 233 Pfam PF00072 Response regulator receiver domain 3 112 7.0E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_12770 e72e9922b2c8404c8bdd2055daed611c 368 SMART SM00382 32 215 8.9E-22 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_12770 e72e9922b2c8404c8bdd2055daed611c 368 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_12770 e72e9922b2c8404c8bdd2055daed611c 368 Gene3D G3DSA:3.40.50.300 6 225 1.1E-72 T 12-10-2018 N288_12770 e72e9922b2c8404c8bdd2055daed611c 368 SUPERFAMILY SSF52540 6 247 1.91E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_12770 e72e9922b2c8404c8bdd2055daed611c 368 SUPERFAMILY SSF50331 240 345 6.46E-14 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal N288_12770 e72e9922b2c8404c8bdd2055daed611c 368 Gene3D G3DSA:2.40.50.940 226 344 2.1E-13 T 12-10-2018 N288_12770 e72e9922b2c8404c8bdd2055daed611c 368 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 38 321 1.9E-109 T 12-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 N288_12770 e72e9922b2c8404c8bdd2055daed611c 368 Gene3D G3DSA:2.40.50.140 283 337 2.1E-13 T 12-10-2018 N288_12770 e72e9922b2c8404c8bdd2055daed611c 368 Pfam PF08402 TOBE domain 276 345 9.0E-9 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 N288_12770 e72e9922b2c8404c8bdd2055daed611c 368 Pfam PF00005 ABC transporter 23 165 1.3E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_04185 1348e7022c348ade8917ef69de8daa32 302 SUPERFAMILY SSF103481 193 287 1.28E-9 T 12-10-2018 N288_04185 1348e7022c348ade8917ef69de8daa32 302 Pfam PF00892 EamA-like transporter family 151 281 5.8E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_04185 1348e7022c348ade8917ef69de8daa32 302 Pfam PF00892 EamA-like transporter family 7 136 4.2E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_04185 1348e7022c348ade8917ef69de8daa32 302 SUPERFAMILY SSF103481 43 136 1.5E-9 T 12-10-2018 N288_24265 b0c5c10745467dec55f8d4ec0ba21bb0 438 SUPERFAMILY SSF51735 1 187 1.56E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_24265 b0c5c10745467dec55f8d4ec0ba21bb0 438 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 182 5.5E-53 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 N288_24265 b0c5c10745467dec55f8d4ec0ba21bb0 438 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 408 4.6E-128 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 N288_24265 b0c5c10745467dec55f8d4ec0ba21bb0 438 Gene3D G3DSA:1.20.5.100 195 226 4.9E-16 T 12-10-2018 N288_24265 b0c5c10745467dec55f8d4ec0ba21bb0 438 PIRSF PIRSF500134 1 430 7.9E-157 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 N288_24265 b0c5c10745467dec55f8d4ec0ba21bb0 438 SUPERFAMILY SSF48179 196 293 1.47E-31 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_24265 b0c5c10745467dec55f8d4ec0ba21bb0 438 Gene3D G3DSA:3.40.50.720 227 436 8.4E-65 T 12-10-2018 N288_24265 b0c5c10745467dec55f8d4ec0ba21bb0 438 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 196 288 4.0E-37 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 N288_24265 b0c5c10745467dec55f8d4ec0ba21bb0 438 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 310 410 1.2E-26 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 N288_24265 b0c5c10745467dec55f8d4ec0ba21bb0 438 Gene3D G3DSA:3.40.50.720 1 194 1.3E-64 T 12-10-2018 N288_24265 b0c5c10745467dec55f8d4ec0ba21bb0 438 SMART SM00984 310 412 1.1E-35 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 N288_24265 b0c5c10745467dec55f8d4ec0ba21bb0 438 PIRSF PIRSF000124 1 427 4.3E-129 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 N288_24265 b0c5c10745467dec55f8d4ec0ba21bb0 438 SUPERFAMILY SSF52413 299 422 8.11E-29 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 N288_00770 c9d3d9d92921c70beeadaef886ac9440 113 SUPERFAMILY SSF54843 1 112 3.92E-45 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 N288_00770 c9d3d9d92921c70beeadaef886ac9440 113 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 8.4E-38 T 12-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 N288_00770 c9d3d9d92921c70beeadaef886ac9440 113 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 106 8.3E-53 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00770 c9d3d9d92921c70beeadaef886ac9440 113 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 12-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00770 c9d3d9d92921c70beeadaef886ac9440 113 Gene3D G3DSA:3.90.470.10 1 113 7.7E-51 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 N288_00770 c9d3d9d92921c70beeadaef886ac9440 113 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 30.35 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18160 d38d7c1216af5d992c04e12e749dbd49 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 18.089 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18160 d38d7c1216af5d992c04e12e749dbd49 49 Gene3D G3DSA:2.20.28.120 1 49 1.8E-23 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18160 d38d7c1216af5d992c04e12e749dbd49 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 12-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_18160 d38d7c1216af5d992c04e12e749dbd49 49 SUPERFAMILY SSF57829 1 49 2.01E-18 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 N288_18160 d38d7c1216af5d992c04e12e749dbd49 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 1.0E-19 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18160 d38d7c1216af5d992c04e12e749dbd49 49 Pfam PF00471 Ribosomal protein L33 3 49 2.1E-22 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_19245 88bf8eca1a8f29fd083197b1ee036409 421 Pfam PF07724 AAA domain (Cdc48 subfamily) 109 305 2.0E-51 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 N288_19245 88bf8eca1a8f29fd083197b1ee036409 421 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 409 53.861 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 N288_19245 88bf8eca1a8f29fd083197b1ee036409 421 Gene3D G3DSA:3.40.50.300 53 309 1.7E-108 T 12-10-2018 N288_19245 88bf8eca1a8f29fd083197b1ee036409 421 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 389 5.5E-18 T 12-10-2018 IPR019489 Clp ATPase, C-terminal N288_19245 88bf8eca1a8f29fd083197b1ee036409 421 SMART SM00994 10 49 8.0E-24 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 N288_19245 88bf8eca1a8f29fd083197b1ee036409 421 SUPERFAMILY SSF57716 11 46 1.71E-11 T 12-10-2018 N288_19245 88bf8eca1a8f29fd083197b1ee036409 421 Pfam PF06689 ClpX C4-type zinc finger 12 48 2.6E-20 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 N288_19245 88bf8eca1a8f29fd083197b1ee036409 421 SMART SM01086 311 407 3.6E-35 T 12-10-2018 IPR019489 Clp ATPase, C-terminal N288_19245 88bf8eca1a8f29fd083197b1ee036409 421 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 6 406 4.3E-217 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 N288_19245 88bf8eca1a8f29fd083197b1ee036409 421 SUPERFAMILY SSF52540 59 396 1.29E-79 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_19245 88bf8eca1a8f29fd083197b1ee036409 421 Gene3D G3DSA:1.10.8.60 310 417 1.2E-38 T 12-10-2018 N288_19245 88bf8eca1a8f29fd083197b1ee036409 421 SMART SM00382 108 259 9.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_19245 88bf8eca1a8f29fd083197b1ee036409 421 Gene3D G3DSA:3.30.50.30 3 50 8.4E-22 T 12-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily N288_24775 806c27e518dd4611828c7cda76692b29 355 SUPERFAMILY SSF47384 119 201 2.75E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_24775 806c27e518dd4611828c7cda76692b29 355 Gene3D G3DSA:1.20.1480.50 42 129 4.5E-5 T 12-10-2018 N288_24775 806c27e518dd4611828c7cda76692b29 355 SUPERFAMILY SSF55874 205 350 4.59E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_24775 806c27e518dd4611828c7cda76692b29 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 318 336 6.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_24775 806c27e518dd4611828c7cda76692b29 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 312 6.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_24775 806c27e518dd4611828c7cda76692b29 355 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 252 346 6.3E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_24775 806c27e518dd4611828c7cda76692b29 355 SMART SM00388 134 201 6.6E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_24775 806c27e518dd4611828c7cda76692b29 355 SUPERFAMILY SSF158472 80 123 1.57E-6 T 12-10-2018 N288_24775 806c27e518dd4611828c7cda76692b29 355 SMART SM00387 247 355 2.7E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_24775 806c27e518dd4611828c7cda76692b29 355 Gene3D G3DSA:1.10.287.130 130 203 9.0E-22 T 12-10-2018 N288_24775 806c27e518dd4611828c7cda76692b29 355 Gene3D G3DSA:3.30.565.10 206 353 1.8E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_24775 806c27e518dd4611828c7cda76692b29 355 Pfam PF00512 His Kinase A (phospho-acceptor) domain 134 199 7.0E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_21795 3a70263af03daf1055946302b08b3b8f 959 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 923 0.0 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 N288_21795 3a70263af03daf1055946302b08b3b8f 959 Gene3D G3DSA:1.20.1580.10 691 828 3.1E-147 T 12-10-2018 N288_21795 3a70263af03daf1055946302b08b3b8f 959 Pfam PF00005 ABC transporter 622 858 6.0E-11 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_21795 3a70263af03daf1055946302b08b3b8f 959 Gene3D G3DSA:1.10.8.280 286 403 5.9E-253 T 12-10-2018 N288_21795 3a70263af03daf1055946302b08b3b8f 959 Gene3D G3DSA:1.20.1580.10 92 492 5.9E-253 T 12-10-2018 N288_21795 3a70263af03daf1055946302b08b3b8f 959 SMART SM00382 631 954 0.0065 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_21795 3a70263af03daf1055946302b08b3b8f 959 SMART SM00382 25 564 13.0 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_21795 3a70263af03daf1055946302b08b3b8f 959 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_21795 3a70263af03daf1055946302b08b3b8f 959 Gene3D G3DSA:3.30.190.20 132 241 5.9E-253 T 12-10-2018 N288_21795 3a70263af03daf1055946302b08b3b8f 959 Gene3D G3DSA:3.40.50.300 612 934 3.1E-147 T 12-10-2018 N288_21795 3a70263af03daf1055946302b08b3b8f 959 Gene3D G3DSA:3.40.50.300 7 595 5.9E-253 T 12-10-2018 N288_21795 3a70263af03daf1055946302b08b3b8f 959 SUPERFAMILY SSF52540 12 569 2.06E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_21795 3a70263af03daf1055946302b08b3b8f 959 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_21795 3a70263af03daf1055946302b08b3b8f 959 SUPERFAMILY SSF52540 613 911 6.69E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_21795 3a70263af03daf1055946302b08b3b8f 959 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 938 23.624 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 N288_17045 ddf42fe9e97396d8cb6cfa2d36c23b79 234 Pfam PF01209 ubiE/COQ5 methyltransferase family 3 234 5.3E-101 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 N288_17045 ddf42fe9e97396d8cb6cfa2d36c23b79 234 Gene3D G3DSA:3.40.50.150 17 234 4.8E-67 T 12-10-2018 N288_17045 ddf42fe9e97396d8cb6cfa2d36c23b79 234 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 142 156 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 N288_17045 ddf42fe9e97396d8cb6cfa2d36c23b79 234 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 21 36 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 N288_17045 ddf42fe9e97396d8cb6cfa2d36c23b79 234 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1 234 36.617 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 N288_17045 ddf42fe9e97396d8cb6cfa2d36c23b79 234 SUPERFAMILY SSF53335 4 227 3.19E-49 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_17045 ddf42fe9e97396d8cb6cfa2d36c23b79 234 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 10 234 2.3E-81 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 N288_17045 ddf42fe9e97396d8cb6cfa2d36c23b79 234 TIGRFAM TIGR02752 MenG_heptapren: demethylmenaquinone methyltransferase 4 234 2.3E-134 T 12-10-2018 IPR014122 Demethylmenaquinone methyltransferase GO:0008168|GO:0009234 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 N288_15890 a166b28fa5ebe7073172389cd7019ee0 314 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 304 1.7E-58 T 12-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain N288_15890 a166b28fa5ebe7073172389cd7019ee0 314 SUPERFAMILY SSF53590 1 308 1.44E-72 T 12-10-2018 IPR036452 Ribonucleoside hydrolase-like N288_15890 a166b28fa5ebe7073172389cd7019ee0 314 Gene3D G3DSA:3.90.245.10 2 313 1.8E-72 T 12-10-2018 IPR036452 Ribonucleoside hydrolase-like N288_07665 2d3a192d762b6ee292dcab271fbcf40e 505 Hamap MF_01916 Cardiolipin synthase. 35 505 43.06 T 12-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 N288_07665 2d3a192d762b6ee292dcab271fbcf40e 505 SUPERFAMILY SSF56024 131 335 4.71E-51 T 12-10-2018 N288_07665 2d3a192d762b6ee292dcab271fbcf40e 505 Pfam PF13396 Phospholipase_D-nuclease N-terminal 41 83 3.0E-8 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal N288_07665 2d3a192d762b6ee292dcab271fbcf40e 505 SUPERFAMILY SSF56024 293 491 4.71E-47 T 12-10-2018 N288_07665 2d3a192d762b6ee292dcab271fbcf40e 505 Gene3D G3DSA:3.30.870.10 336 479 4.7E-27 T 12-10-2018 N288_07665 2d3a192d762b6ee292dcab271fbcf40e 505 Pfam PF13091 PLD-like domain 158 301 4.6E-12 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 N288_07665 2d3a192d762b6ee292dcab271fbcf40e 505 Pfam PF13091 PLD-like domain 348 468 1.2E-27 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 N288_07665 2d3a192d762b6ee292dcab271fbcf40e 505 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 35 505 5.4E-187 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 N288_07665 2d3a192d762b6ee292dcab271fbcf40e 505 SMART SM00155 241 268 6.9E-4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 N288_07665 2d3a192d762b6ee292dcab271fbcf40e 505 SMART SM00155 418 445 4.4E-8 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 N288_07665 2d3a192d762b6ee292dcab271fbcf40e 505 Gene3D G3DSA:3.30.870.10 138 325 4.1E-46 T 12-10-2018 N288_03090 187a4ab1aef85914cd3b5984b2d73d15 580 SUPERFAMILY SSF52540 329 568 1.66E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_03090 187a4ab1aef85914cd3b5984b2d73d15 580 Pfam PF00005 ABC transporter 350 499 2.3E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_03090 187a4ab1aef85914cd3b5984b2d73d15 580 SMART SM00382 359 543 2.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_03090 187a4ab1aef85914cd3b5984b2d73d15 580 Gene3D G3DSA:1.20.1560.10 1 313 2.0E-86 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_03090 187a4ab1aef85914cd3b5984b2d73d15 580 Pfam PF00664 ABC transporter transmembrane region 19 285 1.6E-46 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 N288_03090 187a4ab1aef85914cd3b5984b2d73d15 580 SUPERFAMILY SSF90123 4 315 7.98E-72 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_03090 187a4ab1aef85914cd3b5984b2d73d15 580 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_03090 187a4ab1aef85914cd3b5984b2d73d15 580 Gene3D G3DSA:3.40.50.300 324 577 6.3E-86 T 12-10-2018 N288_08195 b9acdb31f51de24426daa454d4706bfc 248 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_08195 b9acdb31f51de24426daa454d4706bfc 248 Pfam PF00005 ABC transporter 19 155 5.9E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_08195 b9acdb31f51de24426daa454d4706bfc 248 Gene3D G3DSA:3.40.50.300 1 218 2.8E-61 T 12-10-2018 N288_08195 b9acdb31f51de24426daa454d4706bfc 248 SMART SM00382 28 206 1.4E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_08195 b9acdb31f51de24426daa454d4706bfc 248 SUPERFAMILY SSF52540 3 221 3.64E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_23245 81b81b8764841967dc5c5206618cb354 334 Gene3D G3DSA:3.40.50.720 4 272 1.5E-137 T 12-10-2018 N288_23245 81b81b8764841967dc5c5206618cb354 334 Gene3D G3DSA:3.90.25.10 194 327 1.5E-137 T 12-10-2018 N288_23245 81b81b8764841967dc5c5206618cb354 334 SUPERFAMILY SSF51735 1 328 2.26E-92 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_23245 81b81b8764841967dc5c5206618cb354 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 322 1.7E-56 T 12-10-2018 IPR016040 NAD(P)-binding domain N288_23245 81b81b8764841967dc5c5206618cb354 334 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 7.7E-8 T 12-10-2018 N288_23245 81b81b8764841967dc5c5206618cb354 334 PRINTS PR01713 Nucleotide sugar epimerase signature 254 269 7.7E-8 T 12-10-2018 N288_23245 81b81b8764841967dc5c5206618cb354 334 PRINTS PR01713 Nucleotide sugar epimerase signature 293 310 7.7E-8 T 12-10-2018 N288_23245 81b81b8764841967dc5c5206618cb354 334 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 328 2.8E-130 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 N288_00355 0539cf780ee10ffb950f813344e628c7 1179 Gene3D G3DSA:3.40.50.300 499 1010 6.1E-245 T 12-10-2018 N288_00355 0539cf780ee10ffb950f813344e628c7 1179 Gene3D G3DSA:3.90.1150.50 1021 1178 2.2E-40 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain N288_00355 0539cf780ee10ffb950f813344e628c7 1179 SMART SM00487 621 811 2.2E-34 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_00355 0539cf780ee10ffb950f813344e628c7 1179 Pfam PF02559 CarD-like/TRCF domain 501 596 2.4E-31 T 12-10-2018 IPR003711 CarD-like/TRCF domain N288_00355 0539cf780ee10ffb950f813344e628c7 1179 SMART SM01058 500 597 5.2E-51 T 12-10-2018 IPR003711 CarD-like/TRCF domain N288_00355 0539cf780ee10ffb950f813344e628c7 1179 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 158 1099 0.0 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 N288_00355 0539cf780ee10ffb950f813344e628c7 1179 Pfam PF00271 Helicase conserved C-terminal domain 829 930 3.0E-17 T 12-10-2018 IPR001650 Helicase, C-terminal N288_00355 0539cf780ee10ffb950f813344e628c7 1179 Gene3D G3DSA:3.40.50.300 563 802 6.1E-245 T 12-10-2018 N288_00355 0539cf780ee10ffb950f813344e628c7 1179 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 30 1111 28.67 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 N288_00355 0539cf780ee10ffb950f813344e628c7 1179 SMART SM00982 1025 1125 2.7E-38 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 N288_00355 0539cf780ee10ffb950f813344e628c7 1179 Gene3D G3DSA:3.30.2060.10 140 225 2.3E-62 T 12-10-2018 N288_00355 0539cf780ee10ffb950f813344e628c7 1179 Pfam PF00270 DEAD/DEAH box helicase 627 785 1.1E-17 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 N288_00355 0539cf780ee10ffb950f813344e628c7 1179 SUPERFAMILY SSF143517 1015 1164 2.22E-34 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain N288_00355 0539cf780ee10ffb950f813344e628c7 1179 SMART SM00490 847 931 2.8E-19 T 12-10-2018 IPR001650 Helicase, C-terminal N288_00355 0539cf780ee10ffb950f813344e628c7 1179 Gene3D G3DSA:2.30.30.840 504 562 6.1E-245 T 12-10-2018 N288_00355 0539cf780ee10ffb950f813344e628c7 1179 SUPERFAMILY SSF52540 544 804 1.67E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00355 0539cf780ee10ffb950f813344e628c7 1179 Pfam PF03461 TRCF domain 1026 1115 1.7E-25 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 N288_00355 0539cf780ee10ffb950f813344e628c7 1179 SUPERFAMILY SSF52540 14 369 1.45E-90 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00355 0539cf780ee10ffb950f813344e628c7 1179 SUPERFAMILY SSF52540 803 1011 1.93E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00355 0539cf780ee10ffb950f813344e628c7 1179 SUPERFAMILY SSF52540 377 488 9.96E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00355 0539cf780ee10ffb950f813344e628c7 1179 SUPERFAMILY SSF141259 491 569 2.88E-26 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily N288_00355 0539cf780ee10ffb950f813344e628c7 1179 Gene3D G3DSA:3.40.50.11180 35 328 2.3E-62 T 12-10-2018 N288_13350 a359024df8c38d25a419758d4c8d37ff 695 SUPERFAMILY SSF56601 266 686 4.51E-60 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_13350 a359024df8c38d25a419758d4c8d37ff 695 Gene3D G3DSA:3.90.1310.30 64 568 2.0E-221 T 12-10-2018 N288_13350 a359024df8c38d25a419758d4c8d37ff 695 SUPERFAMILY SSF56519 58 313 3.01E-36 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 N288_13350 a359024df8c38d25a419758d4c8d37ff 695 Gene3D G3DSA:3.40.710.10 314 674 2.0E-221 T 12-10-2018 N288_13350 a359024df8c38d25a419758d4c8d37ff 695 Gene3D G3DSA:1.10.10.1230 89 189 2.0E-221 T 12-10-2018 N288_13350 a359024df8c38d25a419758d4c8d37ff 695 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 299 6.3E-41 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 N288_13350 a359024df8c38d25a419758d4c8d37ff 695 Pfam PF00905 Penicillin binding protein transpeptidase domain 347 680 3.5E-61 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 SUPERFAMILY SSF51445 350 740 1.41E-86 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Gene3D G3DSA:2.60.40.1110 45 146 1.7E-13 T 12-10-2018 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Gene3D G3DSA:3.20.20.80 1284 1755 3.9E-163 T 12-10-2018 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 SUPERFAMILY SSF51445 1300 1747 1.61E-94 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 SUPERFAMILY SSF49452 962 1068 1.93E-33 T 12-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 SMART SM00642 359 737 3.5E-94 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 SUPERFAMILY SSF49452 46 145 3.21E-16 T 12-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Pfam PF00395 S-layer homology domain 2216 2259 1.9E-9 T 12-10-2018 IPR001119 S-layer homology domain N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Pfam PF00395 S-layer homology domain 2143 2188 4.3E-13 T 12-10-2018 IPR001119 S-layer homology domain N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Pfam PF00395 S-layer homology domain 2083 2125 2.7E-10 T 12-10-2018 IPR001119 S-layer homology domain N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 1170 1255 3.3E-9 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Pfam PF00128 Alpha amylase, catalytic domain 390 705 5.5E-61 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Pfam PF00128 Alpha amylase, catalytic domain 1334 1439 1.4E-7 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Pfam PF00128 Alpha amylase, catalytic domain 1465 1672 2.5E-4 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 SUPERFAMILY SSF51011 747 819 1.35E-5 T 12-10-2018 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Gene3D G3DSA:2.60.40.1110 850 960 1.1E-33 T 12-10-2018 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Gene3D G3DSA:2.60.40.1110 961 1069 2.1E-33 T 12-10-2018 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Gene3D G3DSA:2.60.40.1220 1073 1165 1.0E-19 T 12-10-2018 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Pfam PF03714 Bacterial pullanase-associated domain 50 143 1.3E-10 T 12-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Pfam PF03714 Bacterial pullanase-associated domain 859 958 2.9E-21 T 12-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Pfam PF03714 Bacterial pullanase-associated domain 968 1064 2.1E-21 T 12-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Gene3D G3DSA:2.60.40.1180 1756 1847 4.6E-27 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Gene3D G3DSA:2.60.40.1180 742 828 9.7E-7 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 SUPERFAMILY SSF81296 1167 1290 3.5E-15 T 12-10-2018 IPR014756 Immunoglobulin E-set N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 SUPERFAMILY SSF49452 828 958 8.18E-33 T 12-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Gene3D G3DSA:2.60.40.10 1168 1282 8.5E-29 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 Gene3D G3DSA:3.20.20.80 348 741 7.8E-106 T 12-10-2018 N288_22515 ea93093e4a4a23fc52dfef70f243f986 2273 TIGRFAM TIGR02102 pullulan_Gpos: pullulanase, extracellular 854 1861 0.0 T 12-10-2018 IPR011838 Pullulanase, extracellular N288_18605 4cb3e2a744af98ced93ab97ddfcb746c 254 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 39 249 2.4E-54 T 12-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 N288_18605 4cb3e2a744af98ced93ab97ddfcb746c 254 Pfam PF02666 Phosphatidylserine decarboxylase 52 250 1.3E-54 T 12-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 N288_03600 db412f345ca1fa16d6cf8a7cb2f60f4e 264 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 217 5.8E-26 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel N288_03600 db412f345ca1fa16d6cf8a7cb2f60f4e 264 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 186 203 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site N288_11890 b3ab076f859f10dba11996a7d5ada41d 171 Gene3D G3DSA:3.90.79.10 8 152 1.5E-24 T 12-10-2018 N288_11890 b3ab076f859f10dba11996a7d5ada41d 171 ProSitePatterns PS00893 Nudix box signature. 49 70 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_11890 b3ab076f859f10dba11996a7d5ada41d 171 PRINTS PR00502 NUDIX hydrolase family signature 58 73 3.1E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_11890 b3ab076f859f10dba11996a7d5ada41d 171 PRINTS PR00502 NUDIX hydrolase family signature 44 58 3.1E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_11890 b3ab076f859f10dba11996a7d5ada41d 171 SUPERFAMILY SSF55811 17 140 5.01E-21 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_11890 b3ab076f859f10dba11996a7d5ada41d 171 Pfam PF00293 NUDIX domain 21 142 2.1E-14 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 Gene3D G3DSA:3.90.1100.10 343 534 1.3E-74 T 12-10-2018 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 Pfam PF00562 RNA polymerase Rpb2, domain 6 628 1021 6.1E-164 T 12-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 Gene3D G3DSA:3.90.1100.10 558 623 1.9E-18 T 12-10-2018 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 Gene3D G3DSA:2.40.50.100 624 703 1.7E-26 T 12-10-2018 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 Gene3D G3DSA:2.40.270.10 934 999 9.2E-24 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 Pfam PF04560 RNA polymerase Rpb2, domain 7 1023 1097 7.6E-27 T 12-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 Gene3D G3DSA:2.40.50.150 743 882 6.7E-61 T 12-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 Pfam PF04565 RNA polymerase Rpb2, domain 3 421 489 1.2E-30 T 12-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 Pfam PF04563 RNA polymerase beta subunit 7 406 1.9E-28 T 12-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 1 1099 12.212 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 Gene3D G3DSA:3.90.1800.10 1009 1062 1.1E-10 T 12-10-2018 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 Gene3D G3DSA:3.90.1110.10 93 260 2.3E-59 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 Gene3D G3DSA:2.40.270.10 704 742 5.7E-7 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 157 848 0.0 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 Pfam PF10385 RNA polymerase beta subunit external 1 domain 499 566 3.4E-26 T 12-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 Pfam PF04561 RNA polymerase Rpb2, domain 2 322 362 5.5E-6 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 Pfam PF04561 RNA polymerase Rpb2, domain 2 93 243 5.5E-27 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 ProSitePatterns PS01166 RNA polymerases beta chain signature. 874 886 - T 12-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00705 72e180c7f00c95ae18af96688f538e75 1139 SUPERFAMILY SSF64484 6 1107 0.0 T 12-10-2018 N288_20990 1096caf8a33551210751f96452554a5e 321 SUPERFAMILY SSF51735 102 289 5.44E-61 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_20990 1096caf8a33551210751f96452554a5e 321 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 150 177 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 N288_20990 1096caf8a33551210751f96452554a5e 321 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 227 243 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site N288_20990 1096caf8a33551210751f96452554a5e 321 Gene3D G3DSA:3.40.50.720 4 314 4.8E-123 T 12-10-2018 N288_20990 1096caf8a33551210751f96452554a5e 321 Gene3D G3DSA:3.40.50.720 99 288 4.8E-123 T 12-10-2018 N288_20990 1096caf8a33551210751f96452554a5e 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 288 8.4E-65 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 N288_20990 1096caf8a33551210751f96452554a5e 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 2.3E-32 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 N288_20990 1096caf8a33551210751f96452554a5e 321 SUPERFAMILY SSF52283 2 136 7.94E-36 T 12-10-2018 N288_04060 3d2ad73aa602b4253d4556517ecf3c23 468 SUPERFAMILY SSF52540 125 307 1.56E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_04060 3d2ad73aa602b4253d4556517ecf3c23 468 Gene3D G3DSA:3.40.50.300 126 309 1.2E-21 T 12-10-2018 N288_04060 3d2ad73aa602b4253d4556517ecf3c23 468 Pfam PF07728 AAA domain (dynein-related subfamily) 143 294 1.9E-7 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 N288_02250 d8f33bbd0b565aad12b96e11dcfce255 292 SMART SM00382 25 207 5.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_02250 d8f33bbd0b565aad12b96e11dcfce255 292 SUPERFAMILY SSF52540 2 220 1.84E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_02250 d8f33bbd0b565aad12b96e11dcfce255 292 Pfam PF00005 ABC transporter 17 160 7.0E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_02250 d8f33bbd0b565aad12b96e11dcfce255 292 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_02250 d8f33bbd0b565aad12b96e11dcfce255 292 Gene3D G3DSA:3.40.50.300 1 234 4.2E-58 T 12-10-2018 N288_20980 81617c36d57c6cc61ec3ca43737a3fb7 431 Pfam PF01842 ACT domain 350 415 3.9E-10 T 12-10-2018 IPR002912 ACT domain N288_20980 81617c36d57c6cc61ec3ca43737a3fb7 431 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 3.8E-24 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 N288_20980 81617c36d57c6cc61ec3ca43737a3fb7 431 SUPERFAMILY SSF55347 137 302 4.84E-52 T 12-10-2018 N288_20980 81617c36d57c6cc61ec3ca43737a3fb7 431 SUPERFAMILY SSF55021 347 420 4.28E-11 T 12-10-2018 N288_20980 81617c36d57c6cc61ec3ca43737a3fb7 431 Pfam PF00742 Homoserine dehydrogenase 137 315 3.5E-65 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 N288_20980 81617c36d57c6cc61ec3ca43737a3fb7 431 PIRSF PIRSF000098 1 429 8.2E-170 T 12-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 N288_20980 81617c36d57c6cc61ec3ca43737a3fb7 431 Gene3D G3DSA:3.30.70.260 344 417 9.6E-148 T 12-10-2018 N288_20980 81617c36d57c6cc61ec3ca43737a3fb7 431 Gene3D G3DSA:3.30.360.10 136 343 9.6E-148 T 12-10-2018 N288_20980 81617c36d57c6cc61ec3ca43737a3fb7 431 Gene3D G3DSA:3.40.50.720 4 340 9.6E-148 T 12-10-2018 N288_20980 81617c36d57c6cc61ec3ca43737a3fb7 431 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 N288_20980 81617c36d57c6cc61ec3ca43737a3fb7 431 SUPERFAMILY SSF51735 3 158 1.05E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_15565 793bd8a7d56e1f2331be338b9ec3b575 199 PIRSF PIRSF004793 25 199 6.2E-53 T 12-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 N288_15565 793bd8a7d56e1f2331be338b9ec3b575 199 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 77 193 1.3E-39 T 12-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal N288_15565 793bd8a7d56e1f2331be338b9ec3b575 199 SUPERFAMILY SSF143597 34 197 4.97E-47 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily N288_15565 793bd8a7d56e1f2331be338b9ec3b575 199 Gene3D G3DSA:3.40.1700.10 68 199 3.4E-48 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily N288_15565 793bd8a7d56e1f2331be338b9ec3b575 199 Gene3D G3DSA:1.10.287.770 4 67 1.4E-12 T 12-10-2018 N288_15565 793bd8a7d56e1f2331be338b9ec3b575 199 Pfam PF10372 Bacterial membrane-spanning protein N-terminus 2 67 3.0E-25 T 12-10-2018 IPR019457 Uncharacterised domain YojJ, N-terminal N288_15565 793bd8a7d56e1f2331be338b9ec3b575 199 Hamap MF_00838 Diadenylate cyclase [dacB]. 12 199 35.168 T 12-10-2018 IPR034693 Diadenylate cyclase CdaS GO:0004016|GO:0006171 N288_18200 ff77a4fc0c1135c86ddd2b6dc07c13dd 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 283 4.6E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_18200 ff77a4fc0c1135c86ddd2b6dc07c13dd 292 SUPERFAMILY SSF161098 31 275 3.01E-38 T 12-10-2018 IPR035906 MetI-like superfamily N288_18200 ff77a4fc0c1135c86ddd2b6dc07c13dd 292 Gene3D G3DSA:1.10.3720.10 69 291 7.6E-36 T 12-10-2018 IPR035906 MetI-like superfamily N288_18200 ff77a4fc0c1135c86ddd2b6dc07c13dd 292 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 23 289 5.1E-82 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 N288_06110 e7cfda82540950e6192b9f858a2d10b3 626 Gene3D G3DSA:3.20.20.70 197 319 1.4E-8 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_06110 e7cfda82540950e6192b9f858a2d10b3 626 Gene3D G3DSA:3.20.20.70 5 180 7.9E-10 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_06110 e7cfda82540950e6192b9f858a2d10b3 626 SUPERFAMILY SSF51395 7 312 3.33E-26 T 12-10-2018 N288_19205 044d98840789640c8d7f2188f1f2518a 449 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 324 419 1.6E-20 T 12-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 N288_19205 044d98840789640c8d7f2188f1f2518a 449 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 12-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 N288_19205 044d98840789640c8d7f2188f1f2518a 449 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 7 156 2.8E-46 T 12-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 N288_19205 044d98840789640c8d7f2188f1f2518a 449 SUPERFAMILY SSF69075 318 420 3.14E-15 T 12-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 N288_19205 044d98840789640c8d7f2188f1f2518a 449 SUPERFAMILY SSF51735 162 315 3.64E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_19205 044d98840789640c8d7f2188f1f2518a 449 PIRSF PIRSF000445 1 434 9.8E-154 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 N288_19205 044d98840789640c8d7f2188f1f2518a 449 SUPERFAMILY SSF69742 1 158 4.58E-47 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 N288_19205 044d98840789640c8d7f2188f1f2518a 449 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 420 5.0E-157 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 N288_19205 044d98840789640c8d7f2188f1f2518a 449 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 417 29.742 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 N288_19205 044d98840789640c8d7f2188f1f2518a 449 Gene3D G3DSA:3.30.460.30 1 158 1.7E-54 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 N288_19205 044d98840789640c8d7f2188f1f2518a 449 Gene3D G3DSA:3.40.50.720 161 313 3.8E-46 T 12-10-2018 N288_19205 044d98840789640c8d7f2188f1f2518a 449 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 171 306 1.8E-47 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase N288_24390 652a321800a9111a6ccbfb51e7c9eae0 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 474 2.4E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_24390 652a321800a9111a6ccbfb51e7c9eae0 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 2.4E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_24390 652a321800a9111a6ccbfb51e7c9eae0 489 SMART SM00304 198 251 2.5E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_24390 652a321800a9111a6ccbfb51e7c9eae0 489 Pfam PF06580 Histidine kinase 266 344 9.1E-24 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 N288_24390 652a321800a9111a6ccbfb51e7c9eae0 489 Gene3D G3DSA:3.30.565.10 326 482 1.3E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_24390 652a321800a9111a6ccbfb51e7c9eae0 489 SUPERFAMILY SSF55874 322 474 1.7E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_24390 652a321800a9111a6ccbfb51e7c9eae0 489 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 474 2.2E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_24390 652a321800a9111a6ccbfb51e7c9eae0 489 Pfam PF00672 HAMP domain 200 247 9.4E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_24390 652a321800a9111a6ccbfb51e7c9eae0 489 Gene3D G3DSA:1.20.1480.50 162 257 1.9E-14 T 12-10-2018 N288_24390 652a321800a9111a6ccbfb51e7c9eae0 489 SUPERFAMILY SSF158472 200 249 8.76E-10 T 12-10-2018 N288_11600 1647fc26d66a9f8c4dcdac092246e378 71 ProDom PD058323 YUZF BH2251 13 70 5.0E-13 T 12-10-2018 IPR020139 Protein of unknown function DUF2642 N288_11600 1647fc26d66a9f8c4dcdac092246e378 71 Pfam PF10842 Protein of unknown function (DUF2642) 8 70 1.8E-29 T 12-10-2018 IPR020139 Protein of unknown function DUF2642 N288_11350 3746a12d82ec75351e7988571f9d3e56 409 SUPERFAMILY SSF53756 2 404 2.96E-68 T 12-10-2018 N288_11350 3746a12d82ec75351e7988571f9d3e56 409 Gene3D G3DSA:3.40.50.2000 208 387 4.0E-60 T 12-10-2018 N288_11350 3746a12d82ec75351e7988571f9d3e56 409 Pfam PF13579 Glycosyl transferase 4-like domain 15 207 8.0E-16 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 N288_11350 3746a12d82ec75351e7988571f9d3e56 409 Gene3D G3DSA:3.40.50.2000 15 395 4.0E-60 T 12-10-2018 N288_11350 3746a12d82ec75351e7988571f9d3e56 409 Pfam PF00534 Glycosyl transferases group 1 225 376 5.1E-29 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 N288_23800 87ee0879dd991288a07603aa869e67bc 129 SUPERFAMILY SSF52788 1 127 6.54E-26 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily N288_23800 87ee0879dd991288a07603aa869e67bc 129 SMART SM00226 1 126 1.3E-10 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I N288_23800 87ee0879dd991288a07603aa869e67bc 129 Gene3D G3DSA:3.40.50.2300 1 129 1.5E-41 T 12-10-2018 N288_23800 87ee0879dd991288a07603aa869e67bc 129 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 1 122 3.2E-19 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I N288_07120 62b09667fb9d6ab26d00b280ee619abe 184 Pfam PF00717 Peptidase S24-like 36 103 5.2E-20 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C N288_07120 62b09667fb9d6ab26d00b280ee619abe 184 ProSitePatterns PS00501 Signal peptidases I serine active site. 38 45 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 N288_07120 62b09667fb9d6ab26d00b280ee619abe 184 SUPERFAMILY SSF51306 27 181 1.16E-52 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily N288_07120 62b09667fb9d6ab26d00b280ee619abe 184 ProSitePatterns PS00760 Signal peptidases I lysine active site. 81 93 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 N288_07120 62b09667fb9d6ab26d00b280ee619abe 184 ProSitePatterns PS00761 Signal peptidases I signature 3. 142 155 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 N288_07120 62b09667fb9d6ab26d00b280ee619abe 184 Gene3D G3DSA:2.10.109.10 59 184 6.5E-46 T 12-10-2018 N288_07120 62b09667fb9d6ab26d00b280ee619abe 184 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 12 178 2.3E-52 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 N288_07120 62b09667fb9d6ab26d00b280ee619abe 184 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 91 3.5E-21 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 N288_07120 62b09667fb9d6ab26d00b280ee619abe 184 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 137 156 3.5E-21 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 N288_07120 62b09667fb9d6ab26d00b280ee619abe 184 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 29 45 3.5E-21 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 N288_02720 591cece000435f3d7987aef149649d24 476 Pfam PF00092 von Willebrand factor type A domain 171 354 2.7E-18 T 12-10-2018 IPR002035 von Willebrand factor, type A N288_02720 591cece000435f3d7987aef149649d24 476 SUPERFAMILY SSF53300 160 355 2.67E-27 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_02720 591cece000435f3d7987aef149649d24 476 SMART SM00327 169 357 9.9E-23 T 12-10-2018 IPR002035 von Willebrand factor, type A N288_02720 591cece000435f3d7987aef149649d24 476 Gene3D G3DSA:3.40.50.410 161 362 1.4E-32 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_06245 be1a281d4a9041921dedb4871279e518 412 Pfam PF07690 Major Facilitator Superfamily 15 353 9.0E-23 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_06245 be1a281d4a9041921dedb4871279e518 412 SUPERFAMILY SSF103473 6 393 4.58E-38 T 12-10-2018 IPR036259 MFS transporter superfamily N288_06245 be1a281d4a9041921dedb4871279e518 412 Gene3D G3DSA:1.20.1250.20 5 391 3.1E-29 T 12-10-2018 N288_03025 a29d14f319e7ee7742bbce21834328cf 172 Hamap MF_01256 Putative metal-dependent hydrolase . 1 172 40.223 T 12-10-2018 IPR023774 Putative metal-dependent hydrolase YfiT N288_03025 a29d14f319e7ee7742bbce21834328cf 172 SUPERFAMILY SSF109854 2 172 3.51E-49 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_03025 a29d14f319e7ee7742bbce21834328cf 172 Pfam PF12867 DinB superfamily 33 163 3.4E-19 T 12-10-2018 IPR024775 DinB-like domain N288_03025 a29d14f319e7ee7742bbce21834328cf 172 Gene3D G3DSA:1.20.120.450 1 172 4.2E-50 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_17905 a0c6902af49c87f220590796deb708fb 244 Pfam PF04402 Protein of unknown function (DUF541) 43 242 7.7E-39 T 12-10-2018 IPR007497 Protein of unknown function DUF541 N288_17905 a0c6902af49c87f220590796deb708fb 244 Gene3D G3DSA:3.30.110.170 45 242 6.8E-45 T 12-10-2018 N288_17905 a0c6902af49c87f220590796deb708fb 244 Gene3D G3DSA:3.30.70.2970 55 161 6.8E-45 T 12-10-2018 N288_15905 63f58621add47940fceb6620ba1a90fc 612 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 183 207 - T 12-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 N288_15905 63f58621add47940fceb6620ba1a90fc 612 Pfam PF01068 ATP dependent DNA ligase domain 15 207 2.5E-32 T 12-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 N288_15905 63f58621add47940fceb6620ba1a90fc 612 Gene3D G3DSA:3.30.470.30 1 207 1.8E-35 T 12-10-2018 N288_15905 63f58621add47940fceb6620ba1a90fc 612 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 5 309 3.8E-71 T 12-10-2018 IPR014146 DNA ligase D, ligase domain N288_15905 63f58621add47940fceb6620ba1a90fc 612 Gene3D G3DSA:2.40.50.140 213 309 2.6E-7 T 12-10-2018 N288_15905 63f58621add47940fceb6620ba1a90fc 612 Gene3D G3DSA:3.90.920.30 331 600 3.0E-83 T 12-10-2018 N288_15905 63f58621add47940fceb6620ba1a90fc 612 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 323 563 3.6E-88 T 12-10-2018 IPR014145 DNA ligase D, polymerase domain N288_15905 63f58621add47940fceb6620ba1a90fc 612 SUPERFAMILY SSF50249 223 312 9.42E-6 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_15905 63f58621add47940fceb6620ba1a90fc 612 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 21 29 - T 12-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 N288_15905 63f58621add47940fceb6620ba1a90fc 612 SUPERFAMILY SSF56091 2 207 2.04E-33 T 12-10-2018 N288_15905 63f58621add47940fceb6620ba1a90fc 612 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 13 591 1.4E-180 T 12-10-2018 IPR014143 DNA ligase D N288_24735 c34049b679cf73502f98fdc9e796d255 334 PIRSF PIRSF006470 1 333 1.3E-89 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 N288_24735 c34049b679cf73502f98fdc9e796d255 334 Gene3D G3DSA:3.40.190.170 34 334 1.9E-101 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily N288_24735 c34049b679cf73502f98fdc9e796d255 334 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 36 290 6.5E-74 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 N288_24735 c34049b679cf73502f98fdc9e796d255 334 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 37 317 3.9E-86 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 N288_11690 704c15fd49ae8143af49bc1c4a8285a0 349 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 5 347 40.585 T 12-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 N288_11690 704c15fd49ae8143af49bc1c4a8285a0 349 Pfam PF01008 Initiation factor 2 subunit family 47 336 8.4E-86 T 12-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 N288_11690 704c15fd49ae8143af49bc1c4a8285a0 349 Gene3D G3DSA:3.40.50.10470 149 349 1.6E-71 T 12-10-2018 N288_11690 704c15fd49ae8143af49bc1c4a8285a0 349 Gene3D G3DSA:1.20.120.420 1 148 1.3E-49 T 12-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 N288_11690 704c15fd49ae8143af49bc1c4a8285a0 349 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 33 336 2.2E-121 T 12-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 N288_11690 704c15fd49ae8143af49bc1c4a8285a0 349 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 7 336 2.9E-141 T 12-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 N288_11690 704c15fd49ae8143af49bc1c4a8285a0 349 SUPERFAMILY SSF100950 4 343 1.53E-122 T 12-10-2018 IPR037171 NagB/RpiA transferase-like N288_19860 d49f257d3adb7e7a933b50ad31b5dc80 600 Gene3D G3DSA:3.30.70.270 438 596 1.5E-48 T 12-10-2018 N288_19860 d49f257d3adb7e7a933b50ad31b5dc80 600 SUPERFAMILY SSF55781 281 439 5.67E-11 T 12-10-2018 N288_19860 d49f257d3adb7e7a933b50ad31b5dc80 600 SUPERFAMILY SSF55781 138 291 2.18E-15 T 12-10-2018 N288_19860 d49f257d3adb7e7a933b50ad31b5dc80 600 SMART SM00267 432 595 1.7E-59 T 12-10-2018 IPR000160 GGDEF domain N288_19860 d49f257d3adb7e7a933b50ad31b5dc80 600 SUPERFAMILY SSF55073 448 594 5.26E-42 T 12-10-2018 IPR029787 Nucleotide cyclase N288_19860 d49f257d3adb7e7a933b50ad31b5dc80 600 Gene3D G3DSA:3.30.450.40 284 437 8.3E-15 T 12-10-2018 IPR029016 GAF-like domain superfamily N288_19860 d49f257d3adb7e7a933b50ad31b5dc80 600 SMART SM00065 101 280 0.055 T 12-10-2018 IPR003018 GAF domain GO:0005515 N288_19860 d49f257d3adb7e7a933b50ad31b5dc80 600 SMART SM00065 301 440 0.056 T 12-10-2018 IPR003018 GAF domain GO:0005515 N288_19860 d49f257d3adb7e7a933b50ad31b5dc80 600 Pfam PF00990 Diguanylate cyclase, GGDEF domain 444 591 3.3E-42 T 12-10-2018 IPR000160 GGDEF domain N288_19860 d49f257d3adb7e7a933b50ad31b5dc80 600 Gene3D G3DSA:3.30.450.40 141 281 2.9E-15 T 12-10-2018 IPR029016 GAF-like domain superfamily N288_19860 d49f257d3adb7e7a933b50ad31b5dc80 600 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 439 595 3.2E-43 T 12-10-2018 IPR000160 GGDEF domain N288_16885 763dc891eb3ca44a378f6a699e7a3f34 127 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 1.6E-59 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 N288_16885 763dc891eb3ca44a378f6a699e7a3f34 127 PIRSF PIRSF006246 1 126 5.5E-54 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 N288_16885 763dc891eb3ca44a378f6a699e7a3f34 127 SUPERFAMILY SSF50692 1 121 3.64E-51 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily N288_16885 763dc891eb3ca44a378f6a699e7a3f34 127 Pfam PF02261 Aspartate decarboxylase 1 114 7.3E-54 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 N288_16885 763dc891eb3ca44a378f6a699e7a3f34 127 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 73.215 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 N288_16885 763dc891eb3ca44a378f6a699e7a3f34 127 Gene3D G3DSA:2.40.40.20 1 125 8.1E-55 T 12-10-2018 N288_16885 763dc891eb3ca44a378f6a699e7a3f34 127 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 97 2.0E-40 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 N288_19355 5d4cb5e865af972f8fe85d0843d1328b 586 SUPERFAMILY SSF51905 6 426 9.44E-63 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_19355 5d4cb5e865af972f8fe85d0843d1328b 586 Gene3D G3DSA:3.50.50.60 6 403 9.4E-124 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_19355 5d4cb5e865af972f8fe85d0843d1328b 586 PIRSF PIRSF000171 341 573 2.9E-12 T 12-10-2018 N288_19355 5d4cb5e865af972f8fe85d0843d1328b 586 PIRSF PIRSF000171 2 240 1.0E-18 T 12-10-2018 N288_19355 5d4cb5e865af972f8fe85d0843d1328b 586 Pfam PF02910 Fumarate reductase flavoprotein C-term 452 579 1.2E-40 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 N288_19355 5d4cb5e865af972f8fe85d0843d1328b 586 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 6 579 3.1E-283 T 12-10-2018 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 N288_19355 5d4cb5e865af972f8fe85d0843d1328b 586 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 378 1.3E-8 T 12-10-2018 N288_19355 5d4cb5e865af972f8fe85d0843d1328b 586 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.3E-8 T 12-10-2018 N288_19355 5d4cb5e865af972f8fe85d0843d1328b 586 Gene3D G3DSA:1.20.58.100 422 539 1.8E-33 T 12-10-2018 N288_19355 5d4cb5e865af972f8fe85d0843d1328b 586 Gene3D G3DSA:3.90.700.10 258 367 9.4E-124 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 N288_19355 5d4cb5e865af972f8fe85d0843d1328b 586 SUPERFAMILY SSF56425 231 353 4.64E-31 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 N288_19355 5d4cb5e865af972f8fe85d0843d1328b 586 Pfam PF00890 FAD binding domain 6 392 8.4E-86 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 N288_19355 5d4cb5e865af972f8fe85d0843d1328b 586 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.6E-5 T 12-10-2018 N288_19355 5d4cb5e865af972f8fe85d0843d1328b 586 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 396 411 1.6E-5 T 12-10-2018 N288_19355 5d4cb5e865af972f8fe85d0843d1328b 586 SUPERFAMILY SSF46977 443 579 7.06E-44 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 N288_19355 5d4cb5e865af972f8fe85d0843d1328b 586 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 39 48 - T 12-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 N288_19710 30fd4c8ce18b3eb04d13516fbd713363 373 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 352 9.3E-86 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain N288_19710 30fd4c8ce18b3eb04d13516fbd713363 373 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 12-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 N288_19710 30fd4c8ce18b3eb04d13516fbd713363 373 Gene3D G3DSA:3.40.50.720 129 305 4.2E-141 T 12-10-2018 N288_19710 30fd4c8ce18b3eb04d13516fbd713363 373 SMART SM01003 4 136 3.1E-75 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal N288_19710 30fd4c8ce18b3eb04d13516fbd713363 373 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 3.5E-45 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal N288_19710 30fd4c8ce18b3eb04d13516fbd713363 373 Gene3D G3DSA:3.40.50.720 3 353 4.2E-141 T 12-10-2018 N288_19710 30fd4c8ce18b3eb04d13516fbd713363 373 SUPERFAMILY SSF52283 1 360 8.5E-69 T 12-10-2018 N288_19710 30fd4c8ce18b3eb04d13516fbd713363 373 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 12-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 N288_19710 30fd4c8ce18b3eb04d13516fbd713363 373 SUPERFAMILY SSF51735 136 303 1.19E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_19710 30fd4c8ce18b3eb04d13516fbd713363 373 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 2.4E-180 T 12-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 N288_19710 30fd4c8ce18b3eb04d13516fbd713363 373 SMART SM01002 148 297 3.8E-91 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain N288_19710 30fd4c8ce18b3eb04d13516fbd713363 373 PIRSF PIRSF000183 1 371 3.8E-193 T 12-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 SUPERFAMILY SSF48334 256 554 6.41E-91 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 680 696 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 Pfam PF01624 MutS domain I 5 115 4.3E-46 T 12-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 Pfam PF05188 MutS domain II 125 242 1.4E-8 T 12-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 SUPERFAMILY SSF52540 558 790 9.37E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 Pfam PF05190 MutS family domain IV 418 510 2.1E-29 T 12-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 4 876 0.0 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 Gene3D G3DSA:3.40.50.300 559 814 6.1E-104 T 12-10-2018 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 Gene3D G3DSA:1.10.1420.10 255 551 1.1E-105 T 12-10-2018 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 4 870 25.717 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 SMART SM00533 273 582 2.5E-109 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 Pfam PF00488 MutS domain V 603 789 2.8E-84 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 SUPERFAMILY SSF55271 2 112 9.02E-43 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 PIRSF PIRSF037677 1 178 6.9E-33 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 PIRSF PIRSF037677 185 815 1.2E-132 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 SUPERFAMILY SSF53150 114 269 3.01E-30 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 Gene3D G3DSA:3.40.1170.10 1 117 2.9E-48 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 SMART SM00534 599 786 6.3E-120 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 Gene3D G3DSA:3.30.420.110 124 250 3.9E-12 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 Gene3D G3DSA:1.10.1420.10 390 526 1.1E-105 T 12-10-2018 N288_10200 8d50d4c686ce5983caaac9549929d8ec 883 Pfam PF05192 MutS domain III 261 550 4.4E-46 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 N288_25900 f2a4378b017cd8261757903539cbf446 430 Gene3D G3DSA:3.40.440.10 5 252 2.1E-105 T 12-10-2018 N288_25900 f2a4378b017cd8261757903539cbf446 430 Pfam PF00709 Adenylosuccinate synthetase 4 420 5.5E-184 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 N288_25900 f2a4378b017cd8261757903539cbf446 430 Gene3D G3DSA:3.90.170.10 265 429 2.2E-69 T 12-10-2018 N288_25900 f2a4378b017cd8261757903539cbf446 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 424 9.0E-198 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 N288_25900 f2a4378b017cd8261757903539cbf446 430 SMART SM00788 3 422 5.8E-291 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 N288_25900 f2a4378b017cd8261757903539cbf446 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 211.073 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 N288_25900 f2a4378b017cd8261757903539cbf446 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 12-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 N288_25900 f2a4378b017cd8261757903539cbf446 430 SUPERFAMILY SSF52540 1 427 6.48E-174 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_25900 f2a4378b017cd8261757903539cbf446 430 Gene3D G3DSA:1.10.300.10 100 199 2.1E-105 T 12-10-2018 N288_25900 f2a4378b017cd8261757903539cbf446 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 12-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 N288_10065 b3897a4e7aafcb60d17410b2b39e3a08 241 SMART SM00345 14 73 8.5E-23 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_10065 b3897a4e7aafcb60d17410b2b39e3a08 241 Gene3D G3DSA:1.10.10.10 3 74 5.2E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_10065 b3897a4e7aafcb60d17410b2b39e3a08 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 2.3E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_10065 b3897a4e7aafcb60d17410b2b39e3a08 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 2.3E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_10065 b3897a4e7aafcb60d17410b2b39e3a08 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 4.2E-22 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_10065 b3897a4e7aafcb60d17410b2b39e3a08 241 SUPERFAMILY SSF64288 62 239 7.22E-38 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily N288_10065 b3897a4e7aafcb60d17410b2b39e3a08 241 SMART SM00866 95 233 5.4E-26 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 N288_10065 b3897a4e7aafcb60d17410b2b39e3a08 241 Pfam PF07702 UTRA domain 96 232 1.2E-30 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 N288_10065 b3897a4e7aafcb60d17410b2b39e3a08 241 SUPERFAMILY SSF46785 5 84 1.37E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_10065 b3897a4e7aafcb60d17410b2b39e3a08 241 Gene3D G3DSA:3.40.1410.10 77 239 2.2E-31 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily N288_18350 52a5078e8951b6a95de28209ccd41718 603 Pfam PF01807 CHC2 zinc finger 6 100 9.9E-39 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 N288_18350 52a5078e8951b6a95de28209ccd41718 603 SUPERFAMILY SSF48024 465 564 8.63E-10 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 N288_18350 52a5078e8951b6a95de28209ccd41718 603 Gene3D G3DSA:1.10.860.10 467 564 8.5E-35 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal N288_18350 52a5078e8951b6a95de28209ccd41718 603 Pfam PF00772 DnaB-like helicase N terminal domain 469 561 1.5E-5 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 N288_18350 52a5078e8951b6a95de28209ccd41718 603 TIGRFAM TIGR01391 dnaG: DNA primase 5 420 1.3E-149 T 12-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 N288_18350 52a5078e8951b6a95de28209ccd41718 603 Gene3D G3DSA:3.90.980.10 112 243 1.1E-48 T 12-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily N288_18350 52a5078e8951b6a95de28209ccd41718 603 Hamap MF_00974 DNA primase [dnaG]. 4 594 29.64 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 N288_18350 52a5078e8951b6a95de28209ccd41718 603 SMART SM00400 36 90 3.7E-35 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 N288_18350 52a5078e8951b6a95de28209ccd41718 603 SUPERFAMILY SSF56731 116 425 1.57E-100 T 12-10-2018 N288_18350 52a5078e8951b6a95de28209ccd41718 603 Pfam PF08275 DNA primase catalytic core, N-terminal domain 127 254 4.2E-44 T 12-10-2018 IPR013264 DNA primase, catalytic core, N-terminal N288_18350 52a5078e8951b6a95de28209ccd41718 603 SUPERFAMILY SSF57783 4 100 6.29E-38 T 12-10-2018 N288_18350 52a5078e8951b6a95de28209ccd41718 603 Pfam PF13155 Toprim-like 265 350 7.9E-18 T 12-10-2018 N288_18350 52a5078e8951b6a95de28209ccd41718 603 PIRSF PIRSF002811 2 603 5.2E-190 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 N288_18350 52a5078e8951b6a95de28209ccd41718 603 Pfam PF10410 DnaB-helicase binding domain of primase 371 424 9.4E-9 T 12-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 N288_18350 52a5078e8951b6a95de28209ccd41718 603 Gene3D G3DSA:3.90.580.10 1 101 3.4E-42 T 12-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 N288_18350 52a5078e8951b6a95de28209ccd41718 603 SMART SM00493 262 333 6.6E-13 T 12-10-2018 IPR006171 TOPRIM domain N288_18350 52a5078e8951b6a95de28209ccd41718 603 Gene3D G3DSA:3.40.1360.10 244 368 1.5E-38 T 12-10-2018 N288_16710 b7cd18b2ba5eeca387b57144d3463ce5 510 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 249 268 5.6E-82 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_16710 b7cd18b2ba5eeca387b57144d3463ce5 510 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 406 427 5.6E-82 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_16710 b7cd18b2ba5eeca387b57144d3463ce5 510 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 451 469 5.6E-82 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_16710 b7cd18b2ba5eeca387b57144d3463ce5 510 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 232 248 5.6E-82 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_16710 b7cd18b2ba5eeca387b57144d3463ce5 510 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 152 172 5.6E-82 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_16710 b7cd18b2ba5eeca387b57144d3463ce5 510 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 296 312 5.6E-82 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_16710 b7cd18b2ba5eeca387b57144d3463ce5 510 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 337 356 5.6E-82 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_16710 b7cd18b2ba5eeca387b57144d3463ce5 510 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 383 400 5.6E-82 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_16710 b7cd18b2ba5eeca387b57144d3463ce5 510 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 269 288 5.6E-82 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_16710 b7cd18b2ba5eeca387b57144d3463ce5 510 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 7 499 4.6E-217 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_16710 b7cd18b2ba5eeca387b57144d3463ce5 510 Gene3D G3DSA:1.10.1370.30 4 505 3.8E-208 T 12-10-2018 N288_16710 b7cd18b2ba5eeca387b57144d3463ce5 510 SUPERFAMILY SSF55486 10 499 5.98E-123 T 12-10-2018 N288_16710 b7cd18b2ba5eeca387b57144d3463ce5 510 PIRSF PIRSF006615 4 505 1.7E-197 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_03920 4aa726df2d10656faeafb52ffcc101f5 460 Pfam PF01938 TRAM domain 12 64 3.0E-11 T 12-10-2018 IPR002792 TRAM domain N288_03920 4aa726df2d10656faeafb52ffcc101f5 460 Gene3D G3DSA:3.40.1350.30 136 291 5.9E-116 T 12-10-2018 N288_03920 4aa726df2d10656faeafb52ffcc101f5 460 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 22 451 2.0E-177 T 12-10-2018 N288_03920 4aa726df2d10656faeafb52ffcc101f5 460 SUPERFAMILY SSF53335 74 453 2.71E-79 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_03920 4aa726df2d10656faeafb52ffcc101f5 460 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 95 452 6.2E-19 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 N288_03920 4aa726df2d10656faeafb52ffcc101f5 460 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 441 451 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site N288_03920 4aa726df2d10656faeafb52ffcc101f5 460 Gene3D G3DSA:3.40.50.150 87 453 5.9E-116 T 12-10-2018 N288_03920 4aa726df2d10656faeafb52ffcc101f5 460 SUPERFAMILY SSF50249 4 64 1.94E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_03920 4aa726df2d10656faeafb52ffcc101f5 460 Gene3D G3DSA:2.40.50.140 2 85 5.6E-22 T 12-10-2018 N288_03920 4aa726df2d10656faeafb52ffcc101f5 460 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 390 421 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site N288_19360 99b93a9cccff3252e0b1195183fbbbcb 202 Gene3D G3DSA:1.20.1300.10 2 202 3.9E-45 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 N288_19360 99b93a9cccff3252e0b1195183fbbbcb 202 SUPERFAMILY SSF81343 4 201 4.06E-59 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 N288_19360 99b93a9cccff3252e0b1195183fbbbcb 202 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 6 202 1.5E-55 T 12-10-2018 IPR011138 Succinate dehydrogenase cytochrome b558 subunit N288_19360 99b93a9cccff3252e0b1195183fbbbcb 202 PIRSF PIRSF000170 1 202 1.7E-100 T 12-10-2018 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute N288_19360 99b93a9cccff3252e0b1195183fbbbcb 202 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 91 193 4.7E-12 T 12-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 SUPERFAMILY SSF158472 188 237 1.44E-7 T 12-10-2018 N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 Pfam PF16736 Single Cache-like 33 151 5.8E-37 T 12-10-2018 IPR031967 PhoR, single Cache-like domain N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 Gene3D G3DSA:3.30.450.20 240 352 2.1E-12 T 12-10-2018 N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 Pfam PF00989 PAS fold 249 352 2.5E-10 T 12-10-2018 IPR013767 PAS fold GO:0006355 N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 SMART SM00387 474 586 4.7E-44 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 243 361 1.2E-9 T 12-10-2018 IPR000014 PAS domain N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 Gene3D G3DSA:3.30.565.10 433 586 2.2E-52 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 Gene3D G3DSA:1.10.287.130 353 432 1.6E-26 T 12-10-2018 N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 SMART SM00388 361 428 2.1E-22 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 SUPERFAMILY SSF47384 348 428 3.53E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 Gene3D G3DSA:1.20.1480.50 148 239 1.5E-9 T 12-10-2018 N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 SMART SM00091 245 311 3.4E-6 T 12-10-2018 IPR000014 PAS domain N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 SMART SM00304 186 238 2.1E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 525 3.1E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 539 3.1E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 583 3.1E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 564 3.1E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 474 585 2.7E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 Pfam PF00512 His Kinase A (phospho-acceptor) domain 361 427 1.4E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 SUPERFAMILY SSF55874 417 582 4.32E-50 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_19580 fbfdb9d30238253a344ea95e4b934a7a 587 SUPERFAMILY SSF55785 236 353 5.52E-11 T 12-10-2018 IPR035965 PAS domain superfamily N288_11845 0c3a0149dba349f190284dad84ef794d 295 Pfam PF01569 PAP2 superfamily 130 228 6.2E-12 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase N288_11845 0c3a0149dba349f190284dad84ef794d 295 SUPERFAMILY SSF48317 97 232 3.01E-29 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily N288_11845 0c3a0149dba349f190284dad84ef794d 295 Gene3D G3DSA:1.10.606.10 4 265 1.4E-45 T 12-10-2018 IPR016119 Bromoperoxidase/chloroperoxidase C-terminal GO:0004601|GO:0055114 N288_11845 0c3a0149dba349f190284dad84ef794d 295 SMART SM00014 119 228 0.0038 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase N288_10085 1db973f28a86f7b108ae6e15b5779201 319 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 296 1.0E-41 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 N288_24460 92f7837ad70acd8d93e2752280b1cca4 279 SUPERFAMILY SSF55447 179 276 1.31E-15 T 12-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily N288_24460 92f7837ad70acd8d93e2752280b1cca4 279 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 168 7.8E-19 T 12-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 N288_24460 92f7837ad70acd8d93e2752280b1cca4 279 SUPERFAMILY SSF56176 1 169 8.18E-28 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 N288_24460 92f7837ad70acd8d93e2752280b1cca4 279 Gene3D G3DSA:3.30.465.10 4 172 3.3E-23 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 N288_24460 92f7837ad70acd8d93e2752280b1cca4 279 SMART SM01092 179 274 5.0E-12 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal N288_24460 92f7837ad70acd8d93e2752280b1cca4 279 Gene3D G3DSA:3.30.390.50 176 276 3.7E-10 T 12-10-2018 N288_24460 92f7837ad70acd8d93e2752280b1cca4 279 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 178 272 2.0E-6 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 PRINTS PR00315 GTP-binding elongation factor signature 135 144 2.2E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 PRINTS PR00315 GTP-binding elongation factor signature 83 93 2.2E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 PRINTS PR00315 GTP-binding elongation factor signature 99 110 2.2E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.2E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 PRINTS PR00315 GTP-binding elongation factor signature 15 28 2.2E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 TIGRFAM TIGR01393 lepA: elongation factor 4 12 605 0.0 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 Hamap MF_00071 Elongation factor 4 [lepA]. 1 607 315.633 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 Pfam PF00679 Elongation factor G C-terminus 408 495 2.7E-25 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 SUPERFAMILY SSF54980 301 379 2.52E-18 T 12-10-2018 IPR035647 EF-G domain III/V-like N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 Pfam PF03144 Elongation factor Tu domain 2 214 284 3.6E-13 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 Gene3D G3DSA:3.30.70.3380 377 488 5.2E-44 T 12-10-2018 N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 SUPERFAMILY SSF52540 10 214 1.31E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 Pfam PF00009 Elongation factor Tu GTP binding domain 12 190 9.3E-52 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 Pfam PF06421 GTP-binding protein LepA C-terminus 497 603 3.4E-52 T 12-10-2018 IPR013842 GTP-binding protein LepA, C-terminal N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 184 1.1E-18 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 Gene3D G3DSA:2.40.30.10 195 294 1.9E-36 T 12-10-2018 N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 Gene3D G3DSA:3.30.70.2570 489 563 2.4E-35 T 12-10-2018 IPR038363 LepA, C-terminal domain superfamily N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 Gene3D G3DSA:3.30.70.870 295 376 3.6E-36 T 12-10-2018 N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 SMART SM00838 410 495 4.7E-4 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 SUPERFAMILY SSF50447 175 297 6.45E-34 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 SUPERFAMILY SSF54980 408 503 1.87E-26 T 12-10-2018 IPR035647 EF-G domain III/V-like N288_18505 4e07d9c22e6fe0cdf7e4d527cad33048 611 Gene3D G3DSA:3.40.50.300 9 194 5.4E-73 T 12-10-2018 N288_10175 ec24ad8e0bc540b742a16a9b3485b1da 514 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 218 238 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 N288_10175 ec24ad8e0bc540b742a16a9b3485b1da 514 Pfam PF04055 Radical SAM superfamily 218 389 2.3E-34 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 N288_10175 ec24ad8e0bc540b742a16a9b3485b1da 514 Gene3D G3DSA:3.40.50.12160 69 204 5.1E-35 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily N288_10175 ec24ad8e0bc540b742a16a9b3485b1da 514 SMART SM00729 214 432 1.5E-67 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 N288_10175 ec24ad8e0bc540b742a16a9b3485b1da 514 Gene3D G3DSA:3.80.30.20 213 446 2.7E-91 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe N288_10175 ec24ad8e0bc540b742a16a9b3485b1da 514 Pfam PF01938 TRAM domain 443 505 5.2E-18 T 12-10-2018 IPR002792 TRAM domain N288_10175 ec24ad8e0bc540b742a16a9b3485b1da 514 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 70 505 1.5E-208 T 12-10-2018 N288_10175 ec24ad8e0bc540b742a16a9b3485b1da 514 SUPERFAMILY SSF102114 201 437 8.89E-65 T 12-10-2018 N288_10175 ec24ad8e0bc540b742a16a9b3485b1da 514 Pfam PF00919 Uncharacterized protein family UPF0004 70 171 9.5E-29 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 N288_10175 ec24ad8e0bc540b742a16a9b3485b1da 514 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 69 506 74.449 T 12-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 N288_10175 ec24ad8e0bc540b742a16a9b3485b1da 514 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 70 502 5.0E-165 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 N288_15235 066a8204c03f647ee4067a0cfabe8a75 411 SUPERFAMILY SSF54631 183 315 8.72E-26 T 12-10-2018 N288_15235 066a8204c03f647ee4067a0cfabe8a75 411 Pfam PF00571 CBS domain 201 252 6.0E-4 T 12-10-2018 IPR000644 CBS domain N288_15235 066a8204c03f647ee4067a0cfabe8a75 411 Pfam PF00571 CBS domain 266 313 1.0E-5 T 12-10-2018 IPR000644 CBS domain N288_15235 066a8204c03f647ee4067a0cfabe8a75 411 SMART SM01091 330 407 4.3E-18 T 12-10-2018 IPR005170 Transporter-associated domain N288_15235 066a8204c03f647ee4067a0cfabe8a75 411 Gene3D G3DSA:3.30.465.10 324 405 3.0E-18 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 N288_15235 066a8204c03f647ee4067a0cfabe8a75 411 Pfam PF03471 Transporter associated domain 331 406 1.3E-19 T 12-10-2018 IPR005170 Transporter-associated domain N288_15235 066a8204c03f647ee4067a0cfabe8a75 411 SUPERFAMILY SSF56176 325 405 3.27E-15 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 N288_15235 066a8204c03f647ee4067a0cfabe8a75 411 Gene3D G3DSA:3.10.580.10 174 323 6.0E-40 T 12-10-2018 N288_15235 066a8204c03f647ee4067a0cfabe8a75 411 Pfam PF01595 Domain of unknown function DUF21 3 179 1.4E-44 T 12-10-2018 IPR002550 CNNM, transmembrane domain N288_03635 9a700de3e1c49388a5b7b9e158278114 365 SUPERFAMILY SSF46785 2 53 4.85E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_03635 9a700de3e1c49388a5b7b9e158278114 365 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 47 2.9E-10 T 12-10-2018 N288_03635 9a700de3e1c49388a5b7b9e158278114 365 Pfam PF00294 pfkB family carbohydrate kinase 58 349 7.7E-56 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB N288_03635 9a700de3e1c49388a5b7b9e158278114 365 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 304 317 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 N288_03635 9a700de3e1c49388a5b7b9e158278114 365 SUPERFAMILY SSF53613 60 358 4.05E-60 T 12-10-2018 IPR029056 Ribokinase-like N288_03635 9a700de3e1c49388a5b7b9e158278114 365 Gene3D G3DSA:1.10.10.10 1 53 3.4E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_03635 9a700de3e1c49388a5b7b9e158278114 365 Gene3D G3DSA:3.40.1190.20 54 364 2.7E-77 T 12-10-2018 IPR029056 Ribokinase-like N288_03635 9a700de3e1c49388a5b7b9e158278114 365 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 93 117 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 N288_07680 581f9f07470f03dfba323201cd542a2e 609 Gene3D G3DSA:1.10.287.830 187 233 1.6E-21 T 12-10-2018 N288_07680 581f9f07470f03dfba323201cd542a2e 609 Gene3D G3DSA:1.10.1370.20 234 609 1.1E-145 T 12-10-2018 N288_07680 581f9f07470f03dfba323201cd542a2e 609 Gene3D G3DSA:1.20.140.70 30 185 1.8E-55 T 12-10-2018 N288_07680 581f9f07470f03dfba323201cd542a2e 609 Pfam PF08439 Oligopeptidase F 120 189 6.3E-25 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain N288_07680 581f9f07470f03dfba323201cd542a2e 609 SUPERFAMILY SSF55486 61 605 9.99E-142 T 12-10-2018 N288_07680 581f9f07470f03dfba323201cd542a2e 609 Pfam PF01432 Peptidase family M3 211 590 6.9E-82 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 N288_07680 581f9f07470f03dfba323201cd542a2e 609 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 13 602 3.3E-219 T 12-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 N288_07280 dc7e3fc464c654aac7b755167e03e49c 119 ProDom PD067392 MEMBRANE UPF0344 TRANSMEMBRANE MW0851 BCE1257 SIMILAR YISL SAR0931 BCE33L1051 BT9727_1053 1 100 2.0E-20 T 12-10-2018 IPR010899 Protein of unknown function UPF0344 N288_07280 dc7e3fc464c654aac7b755167e03e49c 119 Hamap MF_01536 UPF0344 protein . 1 118 16.008 T 12-10-2018 IPR010899 Protein of unknown function UPF0344 N288_07280 dc7e3fc464c654aac7b755167e03e49c 119 Pfam PF07457 Protein of unknown function (DUF1516) 2 108 1.8E-36 T 12-10-2018 IPR010899 Protein of unknown function UPF0344 N288_25625 555aeea3f4cc5de783111cb7f010ecff 334 SUPERFAMILY SSF103481 214 315 3.92E-11 T 12-10-2018 N288_25625 555aeea3f4cc5de783111cb7f010ecff 334 Pfam PF00892 EamA-like transporter family 25 166 2.6E-22 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_25625 555aeea3f4cc5de783111cb7f010ecff 334 Pfam PF00892 EamA-like transporter family 179 312 8.3E-21 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_25625 555aeea3f4cc5de783111cb7f010ecff 334 SUPERFAMILY SSF103481 62 168 9.02E-9 T 12-10-2018 N288_21195 5ad1b4281ca12a2d1b39a3fd0797d621 128 SUPERFAMILY SSF51230 4 126 1.31E-46 T 12-10-2018 IPR011053 Single hybrid motif N288_21195 5ad1b4281ca12a2d1b39a3fd0797d621 128 Pfam PF01597 Glycine cleavage H-protein 8 127 7.4E-50 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate N288_21195 5ad1b4281ca12a2d1b39a3fd0797d621 128 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 39.907 T 12-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 N288_21195 5ad1b4281ca12a2d1b39a3fd0797d621 128 Gene3D G3DSA:2.40.50.100 2 128 2.0E-53 T 12-10-2018 N288_21195 5ad1b4281ca12a2d1b39a3fd0797d621 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 48 77 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 N288_21195 5ad1b4281ca12a2d1b39a3fd0797d621 128 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 128 6.7E-58 T 12-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 N288_25555 571ac543a19f5a9a53c88d263b80bfbb 212 Pfam PF01381 Helix-turn-helix 13 64 2.6E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_25555 571ac543a19f5a9a53c88d263b80bfbb 212 SUPERFAMILY SSF47413 4 70 9.85E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_25555 571ac543a19f5a9a53c88d263b80bfbb 212 Pfam PF06803 Protein of unknown function (DUF1232) 164 199 1.2E-10 T 12-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 N288_25555 571ac543a19f5a9a53c88d263b80bfbb 212 SMART SM00530 11 66 3.7E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_25555 571ac543a19f5a9a53c88d263b80bfbb 212 Gene3D G3DSA:1.10.260.40 1 70 9.3E-13 T 12-10-2018 N288_06030 a149de4078f887c9002cf5355c5c3b8c 201 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 9 194 33.246 T 12-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 N288_06030 a149de4078f887c9002cf5355c5c3b8c 201 SUPERFAMILY SSF50486 5 197 4.39E-65 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 N288_06030 a149de4078f887c9002cf5355c5c3b8c 201 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 7 194 9.4E-75 T 12-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 N288_06030 a149de4078f887c9002cf5355c5c3b8c 201 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 10 191 9.7E-61 T 12-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 N288_06030 a149de4078f887c9002cf5355c5c3b8c 201 Gene3D G3DSA:3.10.300.10 2 201 9.5E-67 T 12-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 Gene3D G3DSA:3.20.20.10 38 297 3.7E-155 T 12-10-2018 IPR029066 PLP-binding barrel N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 Gene3D G3DSA:2.40.37.10 17 427 3.7E-155 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 388 401 2.9E-17 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 2.9E-17 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 287 306 2.9E-17 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 2.9E-17 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 198 211 2.9E-17 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 34 388 3.9E-15 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 237 250 - T 12-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 PRINTS PR01181 Diaminopimelate decarboxylase signature 81 98 1.8E-31 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 PRINTS PR01181 Diaminopimelate decarboxylase signature 316 334 1.8E-31 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 PRINTS PR01181 Diaminopimelate decarboxylase signature 170 179 1.8E-31 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 PRINTS PR01181 Diaminopimelate decarboxylase signature 398 420 1.8E-31 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 10 430 1.7E-156 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 19 431 41.621 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 SUPERFAMILY SSF51419 30 299 4.07E-80 T 12-10-2018 IPR029066 PLP-binding barrel N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 63 81 - T 12-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 SUPERFAMILY SSF50621 279 431 1.76E-52 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 N288_17400 91e18a7174d5fbd9a7974ef0473287d8 439 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 40 296 1.8E-71 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 N288_17975 494b9a3bc42de50eab491ef598cb7a13 487 Gene3D G3DSA:3.40.640.10 86 327 4.6E-59 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_17975 494b9a3bc42de50eab491ef598cb7a13 487 SUPERFAMILY SSF53383 15 483 1.85E-114 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_17975 494b9a3bc42de50eab491ef598cb7a13 487 Pfam PF02347 Glycine cleavage system P-protein 37 305 2.6E-10 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 N288_17975 494b9a3bc42de50eab491ef598cb7a13 487 Gene3D G3DSA:3.90.1150.10 338 470 1.3E-48 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_17975 494b9a3bc42de50eab491ef598cb7a13 487 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 7 485 60.742 T 12-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 N288_20905 08ca78a00e6d56808838812c7a7acb93 161 SUPERFAMILY SSF55811 7 133 7.72E-27 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_20905 08ca78a00e6d56808838812c7a7acb93 161 PRINTS PR00502 NUDIX hydrolase family signature 37 51 5.3E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_20905 08ca78a00e6d56808838812c7a7acb93 161 PRINTS PR00502 NUDIX hydrolase family signature 51 66 5.3E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_20905 08ca78a00e6d56808838812c7a7acb93 161 Pfam PF00293 NUDIX domain 10 124 1.0E-18 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_20905 08ca78a00e6d56808838812c7a7acb93 161 Gene3D G3DSA:3.90.79.10 10 143 1.2E-26 T 12-10-2018 N288_20905 08ca78a00e6d56808838812c7a7acb93 161 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_03060 92fb5e9cc9de71b5f2a632dfa34618f8 209 Gene3D G3DSA:3.90.79.10 1 206 2.7E-39 T 12-10-2018 N288_03060 92fb5e9cc9de71b5f2a632dfa34618f8 209 Pfam PF00293 NUDIX domain 31 154 1.2E-6 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_03060 92fb5e9cc9de71b5f2a632dfa34618f8 209 SUPERFAMILY SSF55811 4 156 7.58E-25 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_01890 df29a4cd3f955de987fa6a5f3f7bc982 145 Gene3D G3DSA:1.10.10.10 2 54 1.5E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_01890 df29a4cd3f955de987fa6a5f3f7bc982 145 Gene3D G3DSA:3.30.70.920 55 140 1.2E-24 T 12-10-2018 N288_01890 df29a4cd3f955de987fa6a5f3f7bc982 145 SUPERFAMILY SSF54909 64 137 7.69E-16 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel N288_01890 df29a4cd3f955de987fa6a5f3f7bc982 145 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 3.7E-18 T 12-10-2018 N288_01890 df29a4cd3f955de987fa6a5f3f7bc982 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 5.0E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 N288_01890 df29a4cd3f955de987fa6a5f3f7bc982 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 5.0E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 N288_01890 df29a4cd3f955de987fa6a5f3f7bc982 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 5.0E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 N288_01890 df29a4cd3f955de987fa6a5f3f7bc982 145 SMART SM00344 3 109 6.0E-45 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 N288_01890 df29a4cd3f955de987fa6a5f3f7bc982 145 Pfam PF01037 Lrp/AsnC ligand binding domain 69 136 1.3E-12 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain N288_01890 df29a4cd3f955de987fa6a5f3f7bc982 145 SUPERFAMILY SSF46785 2 63 3.86E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_18875 83e7ed4d74f19d546e5a1540f3f14770 215 Gene3D G3DSA:3.30.240.20 159 215 3.6E-15 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily N288_18875 83e7ed4d74f19d546e5a1540f3f14770 215 Pfam PF04239 Protein of unknown function (DUF421) 89 192 3.4E-37 T 12-10-2018 IPR007353 Protein of unknown function DUF421 N288_18875 83e7ed4d74f19d546e5a1540f3f14770 215 Gene3D G3DSA:3.30.240.20 81 153 5.1E-25 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily N288_02760 b83f30433fa2c9f3a08a8a00bbb1364e 552 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 24 333 9.4E-108 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 N288_02760 b83f30433fa2c9f3a08a8a00bbb1364e 552 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 50.956 T 12-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 N288_02760 b83f30433fa2c9f3a08a8a00bbb1364e 552 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 31 42 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_02760 b83f30433fa2c9f3a08a8a00bbb1364e 552 Gene3D G3DSA:1.10.1160.10 257 335 2.0E-32 T 12-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 N288_02760 b83f30433fa2c9f3a08a8a00bbb1364e 552 PRINTS PR00987 Glutamyl-tRNA synthetase signature 42 53 2.9E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 N288_02760 b83f30433fa2c9f3a08a8a00bbb1364e 552 PRINTS PR00987 Glutamyl-tRNA synthetase signature 57 70 2.9E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 N288_02760 b83f30433fa2c9f3a08a8a00bbb1364e 552 PRINTS PR00987 Glutamyl-tRNA synthetase signature 206 216 2.9E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 N288_02760 b83f30433fa2c9f3a08a8a00bbb1364e 552 PRINTS PR00987 Glutamyl-tRNA synthetase signature 28 40 2.9E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 N288_02760 b83f30433fa2c9f3a08a8a00bbb1364e 552 Gene3D G3DSA:3.90.800.10 97 205 8.1E-104 T 12-10-2018 N288_02760 b83f30433fa2c9f3a08a8a00bbb1364e 552 SUPERFAMILY SSF50715 336 548 1.83E-75 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 N288_02760 b83f30433fa2c9f3a08a8a00bbb1364e 552 Gene3D G3DSA:2.40.240.10 337 547 5.8E-81 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 N288_02760 b83f30433fa2c9f3a08a8a00bbb1364e 552 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 25 550 1.1E-225 T 12-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 N288_02760 b83f30433fa2c9f3a08a8a00bbb1364e 552 Gene3D G3DSA:3.40.50.620 25 243 8.1E-104 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_02760 b83f30433fa2c9f3a08a8a00bbb1364e 552 SUPERFAMILY SSF52374 8 332 1.13E-96 T 12-10-2018 N288_02760 b83f30433fa2c9f3a08a8a00bbb1364e 552 Gene3D G3DSA:2.40.240.10 344 462 5.8E-81 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 N288_02760 b83f30433fa2c9f3a08a8a00bbb1364e 552 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 336 529 8.1E-60 T 12-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 N288_13360 53d2c40f020b995fdd117e7f1f1bfff5 184 Pfam PF04542 Sigma-70 region 2 25 85 7.9E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_13360 53d2c40f020b995fdd117e7f1f1bfff5 184 Gene3D G3DSA:1.10.10.10 100 178 9.5E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_13360 53d2c40f020b995fdd117e7f1f1bfff5 184 Pfam PF08281 Sigma-70, region 4 119 170 3.2E-13 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_13360 53d2c40f020b995fdd117e7f1f1bfff5 184 Gene3D G3DSA:1.10.1740.10 8 96 1.3E-21 T 12-10-2018 N288_13360 53d2c40f020b995fdd117e7f1f1bfff5 184 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 43 74 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_13360 53d2c40f020b995fdd117e7f1f1bfff5 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 172 6.9E-28 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_13360 53d2c40f020b995fdd117e7f1f1bfff5 184 SUPERFAMILY SSF88659 113 174 1.0E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_13360 53d2c40f020b995fdd117e7f1f1bfff5 184 SUPERFAMILY SSF88946 15 91 9.42E-20 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_00495 b17926cf917a6e0e5b58718df16a71c0 330 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 N288_00495 b17926cf917a6e0e5b58718df16a71c0 330 PIRSF PIRSF006621 1 329 2.5E-105 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 N288_00495 b17926cf917a6e0e5b58718df16a71c0 330 SUPERFAMILY SSF51395 11 317 2.75E-90 T 12-10-2018 N288_00495 b17926cf917a6e0e5b58718df16a71c0 330 Gene3D G3DSA:3.20.20.70 7 251 1.1E-82 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_00495 b17926cf917a6e0e5b58718df16a71c0 330 Gene3D G3DSA:1.10.1200.80 253 328 6.4E-17 T 12-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 N288_00495 b17926cf917a6e0e5b58718df16a71c0 330 Pfam PF01207 Dihydrouridine synthase (Dus) 14 316 1.2E-107 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 N288_00495 b17926cf917a6e0e5b58718df16a71c0 330 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 4 318 2.5E-134 T 12-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 N288_21100 8c7caed232d8fdd21fb09f2e1a4a7531 450 Gene3D G3DSA:3.90.780.10 286 430 9.0E-11 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_21100 8c7caed232d8fdd21fb09f2e1a4a7531 450 SUPERFAMILY SSF55816 295 448 4.05E-19 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_21100 8c7caed232d8fdd21fb09f2e1a4a7531 450 PRINTS PR01607 Apyrase family signature 3 21 1.7E-14 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_21100 8c7caed232d8fdd21fb09f2e1a4a7531 450 PRINTS PR01607 Apyrase family signature 216 236 1.7E-14 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_21100 8c7caed232d8fdd21fb09f2e1a4a7531 450 PRINTS PR01607 Apyrase family signature 169 186 1.7E-14 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_21100 8c7caed232d8fdd21fb09f2e1a4a7531 450 PRINTS PR01607 Apyrase family signature 188 211 1.7E-14 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_21100 8c7caed232d8fdd21fb09f2e1a4a7531 450 PRINTS PR01607 Apyrase family signature 400 419 1.7E-14 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_21100 8c7caed232d8fdd21fb09f2e1a4a7531 450 Pfam PF02872 5'-nucleotidase, C-terminal domain 291 413 9.7E-8 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_21100 8c7caed232d8fdd21fb09f2e1a4a7531 450 Pfam PF00149 Calcineurin-like phosphoesterase 6 205 1.0E-10 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 N288_21100 8c7caed232d8fdd21fb09f2e1a4a7531 450 Gene3D G3DSA:3.60.21.10 1 277 2.2E-50 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_21100 8c7caed232d8fdd21fb09f2e1a4a7531 450 SUPERFAMILY SSF56300 5 276 1.71E-61 T 12-10-2018 N288_21100 8c7caed232d8fdd21fb09f2e1a4a7531 450 PIRSF PIRSF036361 1 450 1.6E-158 T 12-10-2018 IPR011240 Phosphoesterase-related protein YunD N288_19380 7c588c8ee78364e6bdad1a9142520308 590 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 377 523 7.5E-54 T 12-10-2018 IPR001162 UvrC family homology region N288_19380 7c588c8ee78364e6bdad1a9142520308 590 Gene3D G3DSA:3.40.1440.10 1 99 4.0E-37 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 N288_19380 7c588c8ee78364e6bdad1a9142520308 590 Pfam PF02151 UvrB/uvrC motif 199 230 1.4E-8 T 12-10-2018 IPR001943 UVR domain GO:0005515 N288_19380 7c588c8ee78364e6bdad1a9142520308 590 SMART SM00465 15 95 1.3E-22 T 12-10-2018 IPR000305 GIY-YIG endonuclease N288_19380 7c588c8ee78364e6bdad1a9142520308 590 SUPERFAMILY SSF46600 182 235 1.7E-13 T 12-10-2018 IPR036876 UVR domain superfamily N288_19380 7c588c8ee78364e6bdad1a9142520308 590 SUPERFAMILY SSF47781 502 589 6.04E-20 T 12-10-2018 IPR010994 RuvA domain 2-like N288_19380 7c588c8ee78364e6bdad1a9142520308 590 Hamap MF_00203 UvrABC system protein C [uvrC]. 2 587 28.047 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 N288_19380 7c588c8ee78364e6bdad1a9142520308 590 Pfam PF01541 GIY-YIG catalytic domain 16 90 4.0E-9 T 12-10-2018 IPR000305 GIY-YIG endonuclease N288_19380 7c588c8ee78364e6bdad1a9142520308 590 SUPERFAMILY SSF82771 14 97 5.49E-21 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 N288_19380 7c588c8ee78364e6bdad1a9142520308 590 Gene3D G3DSA:1.10.150.20 527 589 2.7E-19 T 12-10-2018 N288_19380 7c588c8ee78364e6bdad1a9142520308 590 Gene3D G3DSA:3.30.420.340 365 523 9.2E-61 T 12-10-2018 IPR038476 UvrC homology region 2 superfamily N288_19380 7c588c8ee78364e6bdad1a9142520308 590 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 6 570 3.0E-210 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 N288_18060 91d961504f6d01db17072afb3814f52e 126 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 4 113 1.4E-35 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR N288_18060 91d961504f6d01db17072afb3814f52e 126 Pfam PF03960 ArsC family 20 113 2.3E-20 T 12-10-2018 IPR006660 Arsenate reductase-like N288_18060 91d961504f6d01db17072afb3814f52e 126 Gene3D G3DSA:3.40.30.10 4 120 1.7E-36 T 12-10-2018 N288_18060 91d961504f6d01db17072afb3814f52e 126 SUPERFAMILY SSF52833 4 115 1.12E-31 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_12115 fc797ad01258cc097fa0cfa20c273f52 326 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 126 2.6E-15 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_12115 fc797ad01258cc097fa0cfa20c273f52 326 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 160 282 4.0E-14 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_12115 fc797ad01258cc097fa0cfa20c273f52 326 Gene3D G3DSA:3.10.180.10 7 321 2.1E-117 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_12115 fc797ad01258cc097fa0cfa20c273f52 326 Gene3D G3DSA:3.10.180.10 68 226 2.1E-117 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_12115 fc797ad01258cc097fa0cfa20c273f52 326 SUPERFAMILY SSF54593 2 310 9.65E-53 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_09405 a0edcd8b0d9f3ee41a07697a2ec26e1b 802 Pfam PF00271 Helicase conserved C-terminal domain 578 660 1.2E-7 T 12-10-2018 IPR001650 Helicase, C-terminal N288_09405 a0edcd8b0d9f3ee41a07697a2ec26e1b 802 Gene3D G3DSA:3.40.50.300 253 444 5.3E-78 T 12-10-2018 N288_09405 a0edcd8b0d9f3ee41a07697a2ec26e1b 802 SUPERFAMILY SSF52540 532 706 1.36E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_09405 a0edcd8b0d9f3ee41a07697a2ec26e1b 802 Pfam PF04851 Type III restriction enzyme, res subunit 265 429 6.7E-17 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 N288_09405 a0edcd8b0d9f3ee41a07697a2ec26e1b 802 Gene3D G3DSA:1.10.8.630 2 113 1.5E-23 T 12-10-2018 N288_09405 a0edcd8b0d9f3ee41a07697a2ec26e1b 802 SMART SM00490 564 661 2.2E-9 T 12-10-2018 IPR001650 Helicase, C-terminal N288_09405 a0edcd8b0d9f3ee41a07697a2ec26e1b 802 Hamap MF_00983 Probable primosomal protein N' [priA]. 9 801 25.495 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 N288_09405 a0edcd8b0d9f3ee41a07697a2ec26e1b 802 SMART SM00487 262 461 5.2E-26 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_09405 a0edcd8b0d9f3ee41a07697a2ec26e1b 802 TIGRFAM TIGR00595 priA: primosomal protein N' 290 799 3.5E-221 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 N288_09405 a0edcd8b0d9f3ee41a07697a2ec26e1b 802 SUPERFAMILY SSF52540 258 441 2.33E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_21405 6f9c290d8452c76961547ea92d1a1c0d 238 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_21405 6f9c290d8452c76961547ea92d1a1c0d 238 PIRSF PIRSF000126 1 237 1.2E-64 T 12-10-2018 N288_21405 6f9c290d8452c76961547ea92d1a1c0d 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.1E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_21405 6f9c290d8452c76961547ea92d1a1c0d 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.1E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_21405 6f9c290d8452c76961547ea92d1a1c0d 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.1E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_21405 6f9c290d8452c76961547ea92d1a1c0d 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.8E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_21405 6f9c290d8452c76961547ea92d1a1c0d 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.8E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_21405 6f9c290d8452c76961547ea92d1a1c0d 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.8E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_21405 6f9c290d8452c76961547ea92d1a1c0d 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.8E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_21405 6f9c290d8452c76961547ea92d1a1c0d 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.8E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_21405 6f9c290d8452c76961547ea92d1a1c0d 238 Gene3D G3DSA:3.40.50.720 1 236 3.2E-75 T 12-10-2018 N288_21405 6f9c290d8452c76961547ea92d1a1c0d 238 SUPERFAMILY SSF51735 1 223 1.16E-72 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_21405 6f9c290d8452c76961547ea92d1a1c0d 238 Pfam PF00106 short chain dehydrogenase 7 197 5.0E-66 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_15730 fbfea729a107f1f98c64ed2ffb6f059b 558 Gene3D G3DSA:3.40.1770.10 16 538 9.4E-255 T 12-10-2018 N288_15730 fbfea729a107f1f98c64ed2ffb6f059b 558 SUPERFAMILY SSF111326 7 552 1.83E-258 T 12-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 N288_15730 fbfea729a107f1f98c64ed2ffb6f059b 558 Pfam PF17392 Urocanase C-terminal domain 348 542 3.5E-94 T 12-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 N288_15730 fbfea729a107f1f98c64ed2ffb6f059b 558 ProSitePatterns PS01233 Urocanase signature. 438 453 - T 12-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 N288_15730 fbfea729a107f1f98c64ed2ffb6f059b 558 TIGRFAM TIGR01228 hutU: urocanate hydratase 8 550 1.3E-298 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 N288_15730 fbfea729a107f1f98c64ed2ffb6f059b 558 Pfam PF01175 Urocanase Rossmann-like domain 137 345 5.4E-89 T 12-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 N288_15730 fbfea729a107f1f98c64ed2ffb6f059b 558 Hamap MF_00577 Urocanate hydratase [hutU]. 1 552 50.298 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 N288_15730 fbfea729a107f1f98c64ed2ffb6f059b 558 PIRSF PIRSF001423 1 557 2.3E-294 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 N288_15730 fbfea729a107f1f98c64ed2ffb6f059b 558 Gene3D G3DSA:3.40.50.10730 138 345 9.4E-255 T 12-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 N288_15730 fbfea729a107f1f98c64ed2ffb6f059b 558 Pfam PF17391 Urocanase N-terminal domain 9 134 5.3E-62 T 12-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 N288_03045 9a9080376a269ea3a9d7d596e6b962dc 591 SMART SM00387 468 579 1.2E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_03045 9a9080376a269ea3a9d7d596e6b962dc 591 SUPERFAMILY SSF55874 413 577 1.3E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_03045 9a9080376a269ea3a9d7d596e6b962dc 591 SMART SM00388 354 422 1.1E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_03045 9a9080376a269ea3a9d7d596e6b962dc 591 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 469 578 1.6E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_03045 9a9080376a269ea3a9d7d596e6b962dc 591 Gene3D G3DSA:1.10.287.130 281 416 1.0E-15 T 12-10-2018 N288_03045 9a9080376a269ea3a9d7d596e6b962dc 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 1.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_03045 9a9080376a269ea3a9d7d596e6b962dc 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 1.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_03045 9a9080376a269ea3a9d7d596e6b962dc 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 533 1.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_03045 9a9080376a269ea3a9d7d596e6b962dc 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 519 1.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_03045 9a9080376a269ea3a9d7d596e6b962dc 591 Gene3D G3DSA:3.30.565.10 433 583 2.6E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_03045 9a9080376a269ea3a9d7d596e6b962dc 591 Pfam PF00512 His Kinase A (phospho-acceptor) domain 355 413 2.6E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_03045 9a9080376a269ea3a9d7d596e6b962dc 591 SUPERFAMILY SSF47384 345 420 3.14E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_06885 e77a8da32ce6f21f681fc010dfee5763 217 Pfam PF01569 PAP2 superfamily 92 204 2.1E-17 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase N288_06885 e77a8da32ce6f21f681fc010dfee5763 217 SMART SM00014 88 202 2.1E-18 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase N288_06885 e77a8da32ce6f21f681fc010dfee5763 217 Gene3D G3DSA:1.20.144.10 123 216 2.1E-20 T 12-10-2018 N288_06885 e77a8da32ce6f21f681fc010dfee5763 217 Gene3D G3DSA:1.20.144.10 10 122 1.0E-8 T 12-10-2018 N288_06885 e77a8da32ce6f21f681fc010dfee5763 217 SUPERFAMILY SSF48317 15 207 1.31E-32 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily N288_08710 111113a71652bccd1f07dea7e4e7665a 584 Gene3D G3DSA:3.40.50.300 325 581 5.7E-88 T 12-10-2018 N288_08710 111113a71652bccd1f07dea7e4e7665a 584 SUPERFAMILY SSF90123 5 318 1.83E-83 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_08710 111113a71652bccd1f07dea7e4e7665a 584 SMART SM00382 361 547 2.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_08710 111113a71652bccd1f07dea7e4e7665a 584 Pfam PF00005 ABC transporter 352 501 3.1E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_08710 111113a71652bccd1f07dea7e4e7665a 584 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_08710 111113a71652bccd1f07dea7e4e7665a 584 Gene3D G3DSA:1.20.1560.10 1 321 1.9E-91 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_08710 111113a71652bccd1f07dea7e4e7665a 584 SUPERFAMILY SSF52540 326 572 1.22E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_08710 111113a71652bccd1f07dea7e4e7665a 584 Pfam PF00664 ABC transporter transmembrane region 19 288 1.3E-50 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 N288_22670 e77179bd6888cfd5cc276538881e4197 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.1E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_22670 e77179bd6888cfd5cc276538881e4197 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.1E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_22670 e77179bd6888cfd5cc276538881e4197 242 Pfam PF07702 UTRA domain 96 234 2.7E-30 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 N288_22670 e77179bd6888cfd5cc276538881e4197 242 SUPERFAMILY SSF64288 62 239 5.02E-38 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily N288_22670 e77179bd6888cfd5cc276538881e4197 242 SMART SM00866 95 235 3.7E-24 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 N288_22670 e77179bd6888cfd5cc276538881e4197 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 74 3.6E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_22670 e77179bd6888cfd5cc276538881e4197 242 Gene3D G3DSA:3.40.1410.10 76 242 1.8E-36 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily N288_22670 e77179bd6888cfd5cc276538881e4197 242 Gene3D G3DSA:1.10.10.10 7 75 8.4E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_22670 e77179bd6888cfd5cc276538881e4197 242 SUPERFAMILY SSF46785 4 83 4.47E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_22670 e77179bd6888cfd5cc276538881e4197 242 SMART SM00345 15 74 1.1E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_01660 0f433ed6a9f7cbabdb112a1f8fa6dc97 160 Gene3D G3DSA:3.40.50.7700 1 160 8.5E-73 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 N288_01660 0f433ed6a9f7cbabdb112a1f8fa6dc97 160 SUPERFAMILY SSF52255 2 158 4.45E-68 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 N288_01660 0f433ed6a9f7cbabdb112a1f8fa6dc97 160 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 159 7.4E-69 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 N288_01660 0f433ed6a9f7cbabdb112a1f8fa6dc97 160 PIRSF PIRSF001338 1 160 2.8E-69 T 12-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 N288_01660 0f433ed6a9f7cbabdb112a1f8fa6dc97 160 Pfam PF00731 AIR carboxylase 2 149 2.2E-65 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 N288_01660 0f433ed6a9f7cbabdb112a1f8fa6dc97 160 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.912 T 12-10-2018 IPR033747 Class I PurE N288_01660 0f433ed6a9f7cbabdb112a1f8fa6dc97 160 SMART SM01001 1 152 9.5E-104 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 N288_08090 3356e17d94fe46d7350e1b6197c120cd 272 SUPERFAMILY SSF51695 35 271 6.28E-69 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 N288_08090 3356e17d94fe46d7350e1b6197c120cd 272 Gene3D G3DSA:3.20.20.190 18 272 7.5E-81 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 N288_08090 3356e17d94fe46d7350e1b6197c120cd 272 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 39 269 1.5E-48 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 N288_00245 e2ad53859f52b1644b22a937fad22efd 292 Gene3D G3DSA:3.40.1010.10 2 122 3.2E-46 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 N288_00245 e2ad53859f52b1644b22a937fad22efd 292 PIRSF PIRSF005917 3 292 9.1E-104 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 N288_00245 e2ad53859f52b1644b22a937fad22efd 292 SUPERFAMILY SSF53790 13 231 7.72E-81 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 N288_00245 e2ad53859f52b1644b22a937fad22efd 292 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 15 215 4.6E-28 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 N288_00245 e2ad53859f52b1644b22a937fad22efd 292 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 15 233 36.212 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 N288_00245 e2ad53859f52b1644b22a937fad22efd 292 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 93 104 - T 12-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 N288_00245 e2ad53859f52b1644b22a937fad22efd 292 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 16 290 4.8E-79 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 N288_00245 e2ad53859f52b1644b22a937fad22efd 292 Gene3D G3DSA:3.30.950.10 123 237 1.4E-41 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 N288_06610 4d5d751baaa2d44f3600445fb79ec427 459 Gene3D G3DSA:1.20.200.10 138 405 1.6E-111 T 12-10-2018 N288_06610 4d5d751baaa2d44f3600445fb79ec427 459 Pfam PF00206 Lyase 12 341 1.5E-111 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal N288_06610 4d5d751baaa2d44f3600445fb79ec427 459 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 459 89.194 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 N288_06610 4d5d751baaa2d44f3600445fb79ec427 459 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 459 4.9E-231 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 N288_06610 4d5d751baaa2d44f3600445fb79ec427 459 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 N288_06610 4d5d751baaa2d44f3600445fb79ec427 459 Gene3D G3DSA:1.10.275.10 5 137 2.4E-58 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal N288_06610 4d5d751baaa2d44f3600445fb79ec427 459 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 1.0E-34 T 12-10-2018 IPR000362 Fumarate lyase family N288_06610 4d5d751baaa2d44f3600445fb79ec427 459 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.0E-34 T 12-10-2018 IPR000362 Fumarate lyase family N288_06610 4d5d751baaa2d44f3600445fb79ec427 459 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 1.0E-34 T 12-10-2018 IPR000362 Fumarate lyase family N288_06610 4d5d751baaa2d44f3600445fb79ec427 459 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 1.0E-34 T 12-10-2018 IPR000362 Fumarate lyase family N288_06610 4d5d751baaa2d44f3600445fb79ec427 459 SUPERFAMILY SSF48557 3 459 1.27E-155 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 N288_06610 4d5d751baaa2d44f3600445fb79ec427 459 Gene3D G3DSA:1.10.40.30 407 459 9.1E-27 T 12-10-2018 N288_06610 4d5d751baaa2d44f3600445fb79ec427 459 Pfam PF10415 Fumarase C C-terminus 407 459 1.4E-24 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 N288_16270 835655f217180d676529f87ce7f0f205 355 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 69 319 3.6E-50 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 N288_16270 835655f217180d676529f87ce7f0f205 355 SUPERFAMILY SSF50249 27 92 2.74E-5 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_16270 835655f217180d676529f87ce7f0f205 355 Gene3D G3DSA:3.40.50.300 95 263 9.8E-48 T 12-10-2018 N288_16270 835655f217180d676529f87ce7f0f205 355 Pfam PF03193 RsgA GTPase 97 264 5.1E-49 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 N288_16270 835655f217180d676529f87ce7f0f205 355 SUPERFAMILY SSF52540 106 327 8.97E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_16270 835655f217180d676529f87ce7f0f205 355 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 27 327 32.718 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 N288_16270 835655f217180d676529f87ce7f0f205 355 Gene3D G3DSA:1.10.40.50 264 337 7.2E-21 T 12-10-2018 N288_06495 2f90b249fc5376673da69cfee5879573 383 Gene3D G3DSA:1.10.490.70 2 153 2.7E-46 T 12-10-2018 IPR038284 Histidine kinase, N-terminal domain superfamily N288_06495 2f90b249fc5376673da69cfee5879573 383 Gene3D G3DSA:3.30.565.10 222 379 3.0E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_06495 2f90b249fc5376673da69cfee5879573 383 SMART SM00388 159 221 1.4E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_06495 2f90b249fc5376673da69cfee5879573 383 SUPERFAMILY SSF47384 152 219 2.55E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_06495 2f90b249fc5376673da69cfee5879573 383 Pfam PF00512 His Kinase A (phospho-acceptor) domain 160 219 7.1E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_06495 2f90b249fc5376673da69cfee5879573 383 SMART SM00387 264 373 1.2E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_06495 2f90b249fc5376673da69cfee5879573 383 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 333 6.9E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06495 2f90b249fc5376673da69cfee5879573 383 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 370 6.9E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06495 2f90b249fc5376673da69cfee5879573 383 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 352 6.9E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06495 2f90b249fc5376673da69cfee5879573 383 PRINTS PR00344 Bacterial sensor protein C-terminal signature 305 319 6.9E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06495 2f90b249fc5376673da69cfee5879573 383 SUPERFAMILY SSF55874 212 373 1.31E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_06495 2f90b249fc5376673da69cfee5879573 383 Gene3D G3DSA:1.10.287.130 162 217 5.5E-11 T 12-10-2018 N288_06495 2f90b249fc5376673da69cfee5879573 383 Pfam PF09385 Histidine kinase N terminal 6 136 2.5E-52 T 12-10-2018 IPR018984 Histidine kinase, N-terminal N288_06495 2f90b249fc5376673da69cfee5879573 383 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 265 372 2.9E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_25590 8c21a899e744dabc62b10ccdd588923a 167 Pfam PF05163 DinB family 1 160 2.3E-36 T 12-10-2018 IPR007837 DNA damage-inducible protein DinB N288_25590 8c21a899e744dabc62b10ccdd588923a 167 SUPERFAMILY SSF109854 8 152 8.7E-32 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_25590 8c21a899e744dabc62b10ccdd588923a 167 Gene3D G3DSA:1.20.120.450 1 150 2.4E-43 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_14185 7729a71535d31ad9816fdf8326999ef8 486 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 382 390 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site N288_14185 7729a71535d31ad9816fdf8326999ef8 486 SUPERFAMILY SSF51445 14 484 3.17E-172 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_14185 7729a71535d31ad9816fdf8326999ef8 486 PRINTS PR00131 Glycosyl hydrolase family 1 signature 448 460 2.7E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_14185 7729a71535d31ad9816fdf8326999ef8 486 PRINTS PR00131 Glycosyl hydrolase family 1 signature 382 390 2.7E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_14185 7729a71535d31ad9816fdf8326999ef8 486 PRINTS PR00131 Glycosyl hydrolase family 1 signature 403 414 2.7E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_14185 7729a71535d31ad9816fdf8326999ef8 486 PRINTS PR00131 Glycosyl hydrolase family 1 signature 299 313 2.7E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_14185 7729a71535d31ad9816fdf8326999ef8 486 PRINTS PR00131 Glycosyl hydrolase family 1 signature 424 441 2.7E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_14185 7729a71535d31ad9816fdf8326999ef8 486 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 20 34 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site N288_14185 7729a71535d31ad9816fdf8326999ef8 486 Pfam PF00232 Glycosyl hydrolase family 1 14 483 1.5E-175 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_14185 7729a71535d31ad9816fdf8326999ef8 486 Gene3D G3DSA:3.20.20.80 4 486 1.3E-183 T 12-10-2018 N288_06600 bef1645dfc26416e27442890c0ae338a 669 SUPERFAMILY SSF52540 421 663 4.69E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_06600 bef1645dfc26416e27442890c0ae338a 669 SMART SM00382 453 639 9.5E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_06600 bef1645dfc26416e27442890c0ae338a 669 Pfam PF00664 ABC transporter transmembrane region 146 385 5.4E-42 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 N288_06600 bef1645dfc26416e27442890c0ae338a 669 SUPERFAMILY SSF90123 2 417 1.2E-71 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_06600 bef1645dfc26416e27442890c0ae338a 669 Pfam PF00005 ABC transporter 444 593 1.2E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_06600 bef1645dfc26416e27442890c0ae338a 669 ProSitePatterns PS00211 ABC transporters family signature. 565 579 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_06600 bef1645dfc26416e27442890c0ae338a 669 Gene3D G3DSA:1.20.1560.10 136 412 4.2E-69 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_06600 bef1645dfc26416e27442890c0ae338a 669 Gene3D G3DSA:3.40.50.300 424 668 2.6E-87 T 12-10-2018 N288_24750 118cc1faf749a476b037297aaf397f14 204 Pfam PF07563 Protein of unknown function (DUF1541) 146 197 2.4E-24 T 12-10-2018 IPR011438 Domain of unknown function DUF1541 N288_24750 118cc1faf749a476b037297aaf397f14 204 Pfam PF07563 Protein of unknown function (DUF1541) 82 133 8.7E-25 T 12-10-2018 IPR011438 Domain of unknown function DUF1541 N288_24750 118cc1faf749a476b037297aaf397f14 204 Gene3D G3DSA:2.30.30.1210 57 203 4.3E-64 T 12-10-2018 N288_08405 84437bb0adf58a3bf405f1d46d095b83 209 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 197 2.5E-37 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal N288_08405 84437bb0adf58a3bf405f1d46d095b83 209 SMART SM01007 9 197 1.4E-36 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal N288_08405 84437bb0adf58a3bf405f1d46d095b83 209 SUPERFAMILY SSF53639 5 205 2.16E-41 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily N288_08405 84437bb0adf58a3bf405f1d46d095b83 209 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 205 100.146 T 12-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 N288_08405 84437bb0adf58a3bf405f1d46d095b83 209 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 11 201 3.8E-60 T 12-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 N288_08405 84437bb0adf58a3bf405f1d46d095b83 209 Gene3D G3DSA:3.40.225.10 5 208 7.7E-47 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily N288_22385 fc98a381d54a147f2701c20408e860f6 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 290 7.4E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_22385 fc98a381d54a147f2701c20408e860f6 293 Gene3D G3DSA:1.10.3720.10 51 292 5.1E-59 T 12-10-2018 IPR035906 MetI-like superfamily N288_22385 fc98a381d54a147f2701c20408e860f6 293 SUPERFAMILY SSF161098 56 279 1.44E-53 T 12-10-2018 IPR035906 MetI-like superfamily N288_09510 d672edfff93198fde77d103ce2ad820a 259 SUPERFAMILY SSF69065 18 177 1.71E-51 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 N288_09510 d672edfff93198fde77d103ce2ad820a 259 Pfam PF00035 Double-stranded RNA binding motif 177 242 1.9E-17 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain N288_09510 d672edfff93198fde77d103ce2ad820a 259 Gene3D G3DSA:1.10.1520.10 19 166 2.0E-47 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 N288_09510 d672edfff93198fde77d103ce2ad820a 259 Pfam PF14622 Ribonuclease-III-like 33 164 3.7E-37 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 N288_09510 d672edfff93198fde77d103ce2ad820a 259 Gene3D G3DSA:3.30.160.20 175 241 3.1E-23 T 12-10-2018 N288_09510 d672edfff93198fde77d103ce2ad820a 259 SMART SM00358 176 243 2.1E-22 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain N288_09510 d672edfff93198fde77d103ce2ad820a 259 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 23 241 1.4E-80 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 N288_09510 d672edfff93198fde77d103ce2ad820a 259 SUPERFAMILY SSF54768 171 243 8.01E-24 T 12-10-2018 N288_09510 d672edfff93198fde77d103ce2ad820a 259 Hamap MF_00104 Ribonuclease 3 [rnc]. 23 239 31.456 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 N288_09510 d672edfff93198fde77d103ce2ad820a 259 ProSitePatterns PS00517 Ribonuclease III family signature. 59 67 - T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 N288_09510 d672edfff93198fde77d103ce2ad820a 259 SMART SM00535 35 170 1.0E-57 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 N288_11280 d5399daa901c0a4b961eb831996bf5c4 102 Pfam PF07110 EthD domain 14 88 7.0E-11 T 12-10-2018 IPR009799 EthD domain N288_11280 d5399daa901c0a4b961eb831996bf5c4 102 Gene3D G3DSA:3.30.70.100 1 102 7.3E-41 T 12-10-2018 N288_11280 d5399daa901c0a4b961eb831996bf5c4 102 SUPERFAMILY SSF54909 1 99 7.51E-26 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel N288_11280 d5399daa901c0a4b961eb831996bf5c4 102 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 1 101 3.1E-35 T 12-10-2018 IPR009799 EthD domain N288_01320 284de2d33fdf0de4a5ea034394f26d71 210 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 11 191 7.0E-32 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 N288_01320 284de2d33fdf0de4a5ea034394f26d71 210 SMART SM00855 9 159 3.4E-11 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 N288_01320 284de2d33fdf0de4a5ea034394f26d71 210 Gene3D G3DSA:3.40.50.1240 8 197 7.0E-37 T 12-10-2018 IPR029033 Histidine phosphatase superfamily N288_01320 284de2d33fdf0de4a5ea034394f26d71 210 PIRSF PIRSF000709 10 169 7.8E-5 T 12-10-2018 N288_01320 284de2d33fdf0de4a5ea034394f26d71 210 SUPERFAMILY SSF53254 10 190 9.85E-34 T 12-10-2018 IPR029033 Histidine phosphatase superfamily N288_09560 3900c595b5004aaa31faad3fe631430a 920 SMART SM00327 63 223 0.014 T 12-10-2018 IPR002035 von Willebrand factor, type A N288_09560 3900c595b5004aaa31faad3fe631430a 920 SMART SM00327 402 567 2.0E-20 T 12-10-2018 IPR002035 von Willebrand factor, type A N288_09560 3900c595b5004aaa31faad3fe631430a 920 SUPERFAMILY SSF53300 401 566 3.34E-33 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_09560 3900c595b5004aaa31faad3fe631430a 920 Pfam PF13519 von Willebrand factor type A domain 66 161 7.3E-9 T 12-10-2018 IPR002035 von Willebrand factor, type A N288_09560 3900c595b5004aaa31faad3fe631430a 920 Gene3D G3DSA:3.40.50.880 571 672 1.2E-15 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_09560 3900c595b5004aaa31faad3fe631430a 920 Gene3D G3DSA:3.40.50.410 404 570 5.3E-37 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_09560 3900c595b5004aaa31faad3fe631430a 920 SUPERFAMILY SSF53300 61 188 6.2E-11 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_09560 3900c595b5004aaa31faad3fe631430a 920 Gene3D G3DSA:3.40.50.410 58 270 4.1E-15 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_09560 3900c595b5004aaa31faad3fe631430a 920 SUPERFAMILY SSF52317 274 668 2.84E-37 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_09560 3900c595b5004aaa31faad3fe631430a 920 Pfam PF00092 von Willebrand factor type A domain 405 566 2.7E-21 T 12-10-2018 IPR002035 von Willebrand factor, type A N288_22840 eed365f7eff332846f7eb53c36467ead 511 Gene3D G3DSA:1.10.10.60 456 509 4.2E-19 T 12-10-2018 N288_22840 eed365f7eff332846f7eb53c36467ead 511 SUPERFAMILY SSF46689 406 456 3.85E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_22840 eed365f7eff332846f7eb53c36467ead 511 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 460 502 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 N288_22840 eed365f7eff332846f7eb53c36467ead 511 SUPERFAMILY SSF52172 4 161 6.12E-36 T 12-10-2018 IPR011006 CheY-like superfamily N288_22840 eed365f7eff332846f7eb53c36467ead 511 Gene3D G3DSA:3.40.50.2300 3 147 2.8E-35 T 12-10-2018 N288_22840 eed365f7eff332846f7eb53c36467ead 511 SMART SM00448 3 118 7.8E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_22840 eed365f7eff332846f7eb53c36467ead 511 Gene3D G3DSA:1.10.10.60 404 455 7.6E-19 T 12-10-2018 N288_22840 eed365f7eff332846f7eb53c36467ead 511 SUPERFAMILY SSF46689 459 507 2.51E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_22840 eed365f7eff332846f7eb53c36467ead 511 Pfam PF00072 Response regulator receiver domain 6 117 1.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_22840 eed365f7eff332846f7eb53c36467ead 511 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 475 490 4.0E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 N288_22840 eed365f7eff332846f7eb53c36467ead 511 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 490 506 4.0E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 N288_22840 eed365f7eff332846f7eb53c36467ead 511 Pfam PF12833 Helix-turn-helix domain 430 507 7.9E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_22840 eed365f7eff332846f7eb53c36467ead 511 SMART SM00342 423 506 1.4E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_24400 a207d30c494b1afcb29fc837b1590a7d 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 5.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 N288_24400 a207d30c494b1afcb29fc837b1590a7d 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 5.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 N288_24400 a207d30c494b1afcb29fc837b1590a7d 298 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 N288_24400 a207d30c494b1afcb29fc837b1590a7d 298 Pfam PF12833 Helix-turn-helix domain 200 278 1.8E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_24400 a207d30c494b1afcb29fc837b1590a7d 298 SUPERFAMILY SSF46689 178 227 1.16E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_24400 a207d30c494b1afcb29fc837b1590a7d 298 Gene3D G3DSA:1.10.10.60 174 236 1.4E-10 T 12-10-2018 N288_24400 a207d30c494b1afcb29fc837b1590a7d 298 Gene3D G3DSA:1.10.10.2730 237 280 8.0E-14 T 12-10-2018 N288_24400 a207d30c494b1afcb29fc837b1590a7d 298 SMART SM00342 194 277 3.4E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_24400 a207d30c494b1afcb29fc837b1590a7d 298 SUPERFAMILY SSF46689 230 281 1.25E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_20420 25f438678d97d1b513a284ccebb5a387 468 SUPERFAMILY SSF56322 33 464 3.53E-98 T 12-10-2018 IPR005801 ADC synthase GO:0009058 N288_20420 25f438678d97d1b513a284ccebb5a387 468 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 113 463 1.3E-111 T 12-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 N288_20420 25f438678d97d1b513a284ccebb5a387 468 Pfam PF00425 chorismate binding enzyme 203 455 3.5E-74 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal N288_20420 25f438678d97d1b513a284ccebb5a387 468 PRINTS PR00095 Anthranilate synthase component I signature 412 426 1.6E-5 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 N288_20420 25f438678d97d1b513a284ccebb5a387 468 PRINTS PR00095 Anthranilate synthase component I signature 305 318 1.6E-5 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 N288_20420 25f438678d97d1b513a284ccebb5a387 468 PRINTS PR00095 Anthranilate synthase component I signature 397 411 1.6E-5 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 N288_20420 25f438678d97d1b513a284ccebb5a387 468 Hamap MF_01935 Isochorismate synthase MenF [menF]. 1 465 29.485 T 12-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 N288_20420 25f438678d97d1b513a284ccebb5a387 468 Gene3D G3DSA:3.60.120.10 8 465 4.0E-111 T 12-10-2018 IPR005801 ADC synthase GO:0009058 N288_07615 2fda5195510d38342033601a6e94453b 545 Gene3D G3DSA:3.90.76.10 75 196 3.8E-166 T 12-10-2018 N288_07615 2fda5195510d38342033601a6e94453b 545 Gene3D G3DSA:3.40.190.10 46 528 3.8E-166 T 12-10-2018 N288_07615 2fda5195510d38342033601a6e94453b 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 466 8.8E-83 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain N288_07615 2fda5195510d38342033601a6e94453b 545 PIRSF PIRSF002741 2 545 4.4E-132 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 N288_07615 2fda5195510d38342033601a6e94453b 545 SUPERFAMILY SSF53850 45 539 1.74E-130 T 12-10-2018 N288_07615 2fda5195510d38342033601a6e94453b 545 Gene3D G3DSA:3.10.105.10 301 517 3.8E-166 T 12-10-2018 N288_04830 6a6d4d6ca750cf00549495caf7399595 289 Gene3D G3DSA:3.40.50.1820 2 287 6.0E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_04830 6a6d4d6ca750cf00549495caf7399595 289 SUPERFAMILY SSF53474 26 286 2.8E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_04830 6a6d4d6ca750cf00549495caf7399595 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 121 134 2.6E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_04830 6a6d4d6ca750cf00549495caf7399595 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 76 91 2.6E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_04830 6a6d4d6ca750cf00549495caf7399595 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 230 244 2.6E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_04830 6a6d4d6ca750cf00549495caf7399595 289 Pfam PF00561 alpha/beta hydrolase fold 64 153 2.2E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_24095 c6ba53c6605c9f950aa4d2fcd39eb7e1 107 Pfam PF11181 Heat induced stress protein YflT 4 103 2.2E-29 T 12-10-2018 IPR025889 General stress protein 17M-like domain N288_03175 988a13f6271221aa079b68ae5f9afe5d 381 Pfam PF00270 DEAD/DEAH box helicase 28 193 1.2E-41 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 N288_03175 988a13f6271221aa079b68ae5f9afe5d 381 Gene3D G3DSA:3.40.50.300 3 209 4.3E-60 T 12-10-2018 N288_03175 988a13f6271221aa079b68ae5f9afe5d 381 SMART SM00490 255 336 2.5E-30 T 12-10-2018 IPR001650 Helicase, C-terminal N288_03175 988a13f6271221aa079b68ae5f9afe5d 381 SUPERFAMILY SSF52540 73 357 2.48E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_03175 988a13f6271221aa079b68ae5f9afe5d 381 Gene3D G3DSA:3.40.50.300 214 377 3.0E-44 T 12-10-2018 N288_03175 988a13f6271221aa079b68ae5f9afe5d 381 Pfam PF00271 Helicase conserved C-terminal domain 230 336 4.7E-26 T 12-10-2018 IPR001650 Helicase, C-terminal N288_03175 988a13f6271221aa079b68ae5f9afe5d 381 SMART SM00487 23 220 1.4E-50 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_24155 dcdfb90755bfe038a3ce6669021a3917 222 Gene3D G3DSA:3.40.50.10320 1 217 2.1E-50 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 N288_24155 dcdfb90755bfe038a3ce6669021a3917 222 SUPERFAMILY SSF102588 4 191 6.28E-51 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 N288_24155 dcdfb90755bfe038a3ce6669021a3917 222 Pfam PF02585 GlcNAc-PI de-N-acetylase 8 137 8.8E-30 T 12-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 N288_24155 dcdfb90755bfe038a3ce6669021a3917 222 TIGRFAM TIGR04000 thiol_BshB2: bacillithiol biosynthesis deacetylase BshB2 5 221 5.6E-109 T 12-10-2018 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 N288_10955 5c6181d0abb3f62d3d7a095824f37199 329 SUPERFAMILY SSF54106 153 195 3.14E-11 T 12-10-2018 N288_10955 5c6181d0abb3f62d3d7a095824f37199 329 Gene3D G3DSA:3.10.350.10 84 138 4.1E-20 T 12-10-2018 IPR036779 LysM domain superfamily N288_10955 5c6181d0abb3f62d3d7a095824f37199 329 Gene3D G3DSA:3.10.350.10 25 79 1.0E-17 T 12-10-2018 IPR036779 LysM domain superfamily N288_10955 5c6181d0abb3f62d3d7a095824f37199 329 Gene3D G3DSA:3.10.350.10 149 202 2.2E-18 T 12-10-2018 IPR036779 LysM domain superfamily N288_10955 5c6181d0abb3f62d3d7a095824f37199 329 Pfam PF00877 NlpC/P60 family 226 325 5.4E-28 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain N288_10955 5c6181d0abb3f62d3d7a095824f37199 329 SUPERFAMILY SSF54106 87 130 1.83E-12 T 12-10-2018 N288_10955 5c6181d0abb3f62d3d7a095824f37199 329 SMART SM00257 153 196 4.8E-17 T 12-10-2018 IPR018392 LysM domain N288_10955 5c6181d0abb3f62d3d7a095824f37199 329 SMART SM00257 88 131 3.9E-16 T 12-10-2018 IPR018392 LysM domain N288_10955 5c6181d0abb3f62d3d7a095824f37199 329 SMART SM00257 29 72 3.1E-15 T 12-10-2018 IPR018392 LysM domain N288_10955 5c6181d0abb3f62d3d7a095824f37199 329 SUPERFAMILY SSF54106 28 71 8.76E-12 T 12-10-2018 N288_10955 5c6181d0abb3f62d3d7a095824f37199 329 Pfam PF01476 LysM domain 30 71 8.1E-14 T 12-10-2018 IPR018392 LysM domain N288_10955 5c6181d0abb3f62d3d7a095824f37199 329 Pfam PF01476 LysM domain 89 130 8.5E-14 T 12-10-2018 IPR018392 LysM domain N288_10955 5c6181d0abb3f62d3d7a095824f37199 329 Pfam PF01476 LysM domain 154 195 5.2E-16 T 12-10-2018 IPR018392 LysM domain N288_10955 5c6181d0abb3f62d3d7a095824f37199 329 Gene3D G3DSA:3.90.1720.10 207 329 8.5E-41 T 12-10-2018 N288_10955 5c6181d0abb3f62d3d7a095824f37199 329 SUPERFAMILY SSF54001 205 326 2.58E-39 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily N288_22770 218ddd746749559532d4a78333587c10 237 SMART SM00345 7 66 3.9E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_22770 218ddd746749559532d4a78333587c10 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 9.9E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_22770 218ddd746749559532d4a78333587c10 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 9.9E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_22770 218ddd746749559532d4a78333587c10 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 1.2E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_22770 218ddd746749559532d4a78333587c10 237 SUPERFAMILY SSF64288 54 231 5.02E-42 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily N288_22770 218ddd746749559532d4a78333587c10 237 SMART SM00866 90 229 4.2E-39 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 N288_22770 218ddd746749559532d4a78333587c10 237 Gene3D G3DSA:3.40.1410.10 78 234 5.4E-39 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily N288_22770 218ddd746749559532d4a78333587c10 237 Pfam PF07702 UTRA domain 91 229 8.4E-34 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 N288_22770 218ddd746749559532d4a78333587c10 237 SUPERFAMILY SSF46785 1 72 1.13E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_22770 218ddd746749559532d4a78333587c10 237 Gene3D G3DSA:1.10.10.10 1 66 5.1E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_10495 b2ff203dc0af503c7ef10416f9abbbf2 304 PIRSF PIRSF006621 1 304 4.4E-80 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 N288_10495 b2ff203dc0af503c7ef10416f9abbbf2 304 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 81 99 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 N288_10495 b2ff203dc0af503c7ef10416f9abbbf2 304 Gene3D G3DSA:3.20.20.70 1 229 4.7E-60 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_10495 b2ff203dc0af503c7ef10416f9abbbf2 304 Pfam PF01207 Dihydrouridine synthase (Dus) 1 296 1.5E-50 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 N288_10495 b2ff203dc0af503c7ef10416f9abbbf2 304 SUPERFAMILY SSF51395 1 299 4.0E-57 T 12-10-2018 N288_08785 0d22acb0bd43c4e83b65742abd1cf3f9 371 Pfam PF00676 Dehydrogenase E1 component 53 343 1.4E-102 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 N288_08785 0d22acb0bd43c4e83b65742abd1cf3f9 371 SUPERFAMILY SSF52518 21 367 5.71E-103 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_08785 0d22acb0bd43c4e83b65742abd1cf3f9 371 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 24 364 1.4E-144 T 12-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 N288_08785 0d22acb0bd43c4e83b65742abd1cf3f9 371 Gene3D G3DSA:3.40.50.970 5 371 6.6E-124 T 12-10-2018 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 Gene3D G3DSA:3.40.50.10190 595 674 2.2E-26 T 12-10-2018 IPR036420 BRCT domain superfamily N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 Gene3D G3DSA:1.10.150.20 506 587 6.2E-30 T 12-10-2018 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 599 670 6.5E-15 T 12-10-2018 IPR001357 BRCT domain N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 324 400 3.7E-34 T 12-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 SUPERFAMILY SSF52113 595 672 5.72E-21 T 12-10-2018 IPR036420 BRCT domain superfamily N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 SMART SM00278 481 500 120.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 SMART SM00278 545 564 5.1 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 SMART SM00278 447 466 110.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 Gene3D G3DSA:1.10.287.610 7 78 3.6E-27 T 12-10-2018 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 SMART SM00292 598 674 8.4E-14 T 12-10-2018 IPR001357 BRCT domain N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 333 348 - T 12-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 11 320 3.4E-132 T 12-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 Pfam PF14520 Helix-hairpin-helix domain 449 501 4.9E-4 T 12-10-2018 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 Hamap MF_01588 DNA ligase [ligA]. 10 672 54.562 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 SUPERFAMILY SSF47781 405 586 2.04E-66 T 12-10-2018 IPR010994 RuvA domain 2-like N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 Gene3D G3DSA:2.20.70.80 393 430 4.0E-13 T 12-10-2018 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 SMART SM00532 11 449 1.7E-286 T 12-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 19 668 6.2E-280 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 SUPERFAMILY SSF56091 10 320 4.73E-123 T 12-10-2018 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 435 3.4E-12 T 12-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 Gene3D G3DSA:3.30.470.90 79 319 1.0E-101 T 12-10-2018 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 SUPERFAMILY SSF50249 319 402 1.05E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 Pfam PF12826 Helix-hairpin-helix motif 511 574 1.4E-24 T 12-10-2018 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 Gene3D G3DSA:1.10.150.20 433 505 1.8E-31 T 12-10-2018 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 121 150 - T 12-10-2018 IPR018239 NAD-dependent DNA ligase, active site N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 PIRSF PIRSF001604 4 674 8.0E-266 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 N288_01755 e233e9d12fe5637dba35f0ecbfa7de12 674 Gene3D G3DSA:2.40.50.140 320 392 1.6E-30 T 12-10-2018 N288_25650 f6e4c5b4f58f7b0397f17945565aa6ef 279 Gene3D G3DSA:3.40.190.10 38 262 2.2E-53 T 12-10-2018 N288_25650 f6e4c5b4f58f7b0397f17945565aa6ef 279 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 263 2.9E-38 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF N288_25650 f6e4c5b4f58f7b0397f17945565aa6ef 279 Gene3D G3DSA:3.40.190.10 138 235 2.2E-53 T 12-10-2018 N288_25650 f6e4c5b4f58f7b0397f17945565aa6ef 279 SUPERFAMILY SSF53850 1 264 2.84E-49 T 12-10-2018 N288_25650 f6e4c5b4f58f7b0397f17945565aa6ef 279 SMART SM00062 38 275 3.8E-31 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF N288_25650 f6e4c5b4f58f7b0397f17945565aa6ef 279 SMART SM00079 38 274 0.0084 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 N288_07380 39d5904239d2cbdc7565411cccaff960 513 Gene3D G3DSA:2.60.40.1180 391 486 4.4E-35 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_07380 39d5904239d2cbdc7565411cccaff960 513 SUPERFAMILY SSF51445 28 395 2.22E-106 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_07380 39d5904239d2cbdc7565411cccaff960 513 Gene3D G3DSA:3.20.20.80 25 390 2.7E-153 T 12-10-2018 N288_07380 39d5904239d2cbdc7565411cccaff960 513 SMART SM00642 38 386 1.6E-95 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_07380 39d5904239d2cbdc7565411cccaff960 513 Pfam PF00128 Alpha amylase, catalytic domain 66 361 2.3E-71 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_07380 39d5904239d2cbdc7565411cccaff960 513 SUPERFAMILY SSF51011 395 474 9.26E-11 T 12-10-2018 N288_11960 f0ffe1fb9b5f971d3838a74caeb9ff99 471 SUPERFAMILY SSF51338 350 458 1.97E-39 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_11960 f0ffe1fb9b5f971d3838a74caeb9ff99 471 SUPERFAMILY SSF51338 2 64 1.58E-15 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_11960 f0ffe1fb9b5f971d3838a74caeb9ff99 471 Gene3D G3DSA:2.30.40.10 4 456 2.1E-188 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_11960 f0ffe1fb9b5f971d3838a74caeb9ff99 471 SUPERFAMILY SSF51556 53 383 4.58E-110 T 12-10-2018 IPR032466 Metal-dependent hydrolase N288_11960 f0ffe1fb9b5f971d3838a74caeb9ff99 471 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 4 455 1.8E-198 T 12-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 N288_11960 f0ffe1fb9b5f971d3838a74caeb9ff99 471 Gene3D G3DSA:3.20.20.140 53 424 2.1E-188 T 12-10-2018 N288_11960 f0ffe1fb9b5f971d3838a74caeb9ff99 471 Pfam PF01979 Amidohydrolase family 49 436 5.1E-27 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 N288_09175 b58cbd60aaf3077f237c9859f20bf35b 486 SUPERFAMILY SSF53623 97 331 2.35E-77 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 N288_09175 b58cbd60aaf3077f237c9859f20bf35b 486 Pfam PF08245 Mur ligase middle domain 106 312 4.2E-58 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 N288_09175 b58cbd60aaf3077f237c9859f20bf35b 486 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 483 2.2E-176 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 N288_09175 b58cbd60aaf3077f237c9859f20bf35b 486 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 483 37.069 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 N288_09175 b58cbd60aaf3077f237c9859f20bf35b 486 Gene3D G3DSA:3.40.1390.10 6 96 3.0E-27 T 12-10-2018 N288_09175 b58cbd60aaf3077f237c9859f20bf35b 486 SUPERFAMILY SSF63418 5 97 1.44E-25 T 12-10-2018 IPR035911 MurE/MurF, N-terminal N288_09175 b58cbd60aaf3077f237c9859f20bf35b 486 Pfam PF01225 Mur ligase family, catalytic domain 23 94 1.4E-12 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 N288_09175 b58cbd60aaf3077f237c9859f20bf35b 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 332 417 1.8E-24 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 N288_09175 b58cbd60aaf3077f237c9859f20bf35b 486 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 104 128 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 N288_09175 b58cbd60aaf3077f237c9859f20bf35b 486 Gene3D G3DSA:3.90.190.20 337 486 1.0E-61 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 N288_09175 b58cbd60aaf3077f237c9859f20bf35b 486 Gene3D G3DSA:3.40.1190.10 97 336 3.9E-92 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 N288_09175 b58cbd60aaf3077f237c9859f20bf35b 486 SUPERFAMILY SSF53244 332 485 2.22E-49 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 N288_23890 f2e3bcc710275fe0e0988df0cd7d24cc 285 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 285 8.9E-115 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 N288_23890 f2e3bcc710275fe0e0988df0cd7d24cc 285 Gene3D G3DSA:3.20.20.70 1 285 1.3E-113 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_23890 f2e3bcc710275fe0e0988df0cd7d24cc 285 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 284 3.0E-104 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 N288_23890 f2e3bcc710275fe0e0988df0cd7d24cc 285 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 134 145 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 N288_23890 f2e3bcc710275fe0e0988df0cd7d24cc 285 PIRSF PIRSF001359 1 285 7.6E-127 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 N288_23890 f2e3bcc710275fe0e0988df0cd7d24cc 285 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 74 87 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 N288_23890 f2e3bcc710275fe0e0988df0cd7d24cc 285 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 285 2.3E-131 T 12-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 N288_23890 f2e3bcc710275fe0e0988df0cd7d24cc 285 SUPERFAMILY SSF51569 1 285 8.2E-104 T 12-10-2018 N288_00825 d678ee75e1f3f49a93cce564fdb7f9be 166 SUPERFAMILY SSF54768 8 76 9.52E-26 T 12-10-2018 N288_00825 d678ee75e1f3f49a93cce564fdb7f9be 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 75 1.0E-33 T 12-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 N288_00825 d678ee75e1f3f49a93cce564fdb7f9be 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 1.2E-30 T 12-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 N288_00825 d678ee75e1f3f49a93cce564fdb7f9be 166 Gene3D G3DSA:3.30.230.10 74 166 5.5E-37 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup N288_00825 d678ee75e1f3f49a93cce564fdb7f9be 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 163 3.7E-73 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 N288_00825 d678ee75e1f3f49a93cce564fdb7f9be 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 12-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site N288_00825 d678ee75e1f3f49a93cce564fdb7f9be 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 37.148 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 N288_00825 d678ee75e1f3f49a93cce564fdb7f9be 166 SUPERFAMILY SSF54211 80 159 1.16E-25 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_00825 d678ee75e1f3f49a93cce564fdb7f9be 166 Gene3D G3DSA:3.30.160.20 1 73 2.4E-36 T 12-10-2018 N288_09705 a37547c9b2127e972ef0a24d9b4f0886 253 Pfam PF02108 Flagellar assembly protein FliH 119 239 1.4E-12 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE N288_09705 a37547c9b2127e972ef0a24d9b4f0886 253 TIGRFAM TIGR03825 FliH_bacil: flagellar assembly protein FliH 1 250 1.1E-66 T 12-10-2018 IPR022524 Flagellar assembly FliH, Bacilli N288_01575 a82b122ae4004a14dc9e2d8e1e8787f4 156 Hamap MF_00745 Protein SprT-like. 4 150 39.059 T 12-10-2018 IPR023524 Uncharacterised protein family SprT-like N288_01575 a82b122ae4004a14dc9e2d8e1e8787f4 156 Pfam PF10263 SprT-like family 9 97 5.7E-13 T 12-10-2018 IPR006640 SprT-like N288_01575 a82b122ae4004a14dc9e2d8e1e8787f4 156 SMART SM00731 4 150 5.7E-53 T 12-10-2018 IPR006640 SprT-like N288_01575 a82b122ae4004a14dc9e2d8e1e8787f4 156 Pfam PF17283 SprT-like zinc ribbon domain 117 149 1.3E-9 T 12-10-2018 IPR035240 SprT-like, zinc ribbon domain N288_15545 6ac50c922fbe8da440190de5c9322d89 112 Pfam PF12680 SnoaL-like domain 8 107 1.8E-9 T 12-10-2018 IPR037401 SnoaL-like domain N288_15545 6ac50c922fbe8da440190de5c9322d89 112 SUPERFAMILY SSF54427 4 111 6.44E-22 T 12-10-2018 IPR032710 NTF2-like domain superfamily N288_15545 6ac50c922fbe8da440190de5c9322d89 112 Gene3D G3DSA:3.10.450.50 3 112 1.5E-31 T 12-10-2018 N288_15545 6ac50c922fbe8da440190de5c9322d89 112 PIRSF PIRSF030561 1 112 7.9E-30 T 12-10-2018 IPR008317 Uncharacterised conserved protein UCP030561 N288_00870 233381ed64bbc950b5e09b183fabd55f 121 Gene3D G3DSA:1.10.8.50 1 71 2.1E-30 T 12-10-2018 N288_00870 233381ed64bbc950b5e09b183fabd55f 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 28.049 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00870 233381ed64bbc950b5e09b183fabd55f 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.4E-34 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00870 233381ed64bbc950b5e09b183fabd55f 121 Gene3D G3DSA:4.10.910.10 72 121 1.8E-26 T 12-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00870 233381ed64bbc950b5e09b183fabd55f 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 3.2E-54 T 12-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00870 233381ed64bbc950b5e09b183fabd55f 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 12-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00870 233381ed64bbc950b5e09b183fabd55f 121 PIRSF PIRSF002134 1 121 1.6E-43 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00870 233381ed64bbc950b5e09b183fabd55f 121 SUPERFAMILY SSF46946 2 114 4.56E-46 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 N288_16185 83341ed550248b2b01d3913bc700c80f 471 Gene3D G3DSA:2.40.50.600 349 414 3.2E-20 T 12-10-2018 N288_16185 83341ed550248b2b01d3913bc700c80f 471 Pfam PF12544 Lysine-2,3-aminomutase 321 447 3.3E-64 T 12-10-2018 IPR025895 Lysine-2,3-aminomutase, C-terminal domain N288_16185 83341ed550248b2b01d3913bc700c80f 471 TIGRFAM TIGR00238 TIGR00238: KamA family protein 14 342 8.3E-149 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase N288_16185 83341ed550248b2b01d3913bc700c80f 471 Gene3D G3DSA:3.20.20.70 63 348 9.3E-120 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_16185 83341ed550248b2b01d3913bc700c80f 471 Pfam PF13353 4Fe-4S single cluster domain 127 200 1.6E-5 T 12-10-2018 N288_16185 83341ed550248b2b01d3913bc700c80f 471 PIRSF PIRSF004911 4 407 6.9E-163 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase N288_16185 83341ed550248b2b01d3913bc700c80f 471 Pfam PF04055 Radical SAM superfamily 130 277 4.9E-7 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 N288_16185 83341ed550248b2b01d3913bc700c80f 471 TIGRFAM TIGR03820 lys_2_3_AblA: lysine-2,3-aminomutase 21 427 1.3E-194 T 12-10-2018 IPR022459 Lysine-2,3-aminomutase KEGG: 00310+5.4.3.2 N288_16185 83341ed550248b2b01d3913bc700c80f 471 SUPERFAMILY SSF102114 114 356 1.31E-33 T 12-10-2018 N288_23045 6c550c3563efb9990091f76d4791b372 801 Gene3D G3DSA:3.20.20.80 247 630 4.3E-111 T 12-10-2018 N288_23045 6c550c3563efb9990091f76d4791b372 801 Gene3D G3DSA:2.60.40.1760 6 245 1.9E-41 T 12-10-2018 N288_23045 6c550c3563efb9990091f76d4791b372 801 Pfam PF01055 Glycosyl hydrolases family 31 241 684 2.5E-120 T 12-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 N288_23045 6c550c3563efb9990091f76d4791b372 801 Pfam PF17137 Domain of unknown function (DUF5110) 705 761 3.9E-10 T 12-10-2018 IPR033403 Domain of unknown function DUF5110 N288_23045 6c550c3563efb9990091f76d4791b372 801 Gene3D G3DSA:2.60.40.1180 633 682 1.0E-14 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_23045 6c550c3563efb9990091f76d4791b372 801 SUPERFAMILY SSF74650 4 246 5.34E-48 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 N288_23045 6c550c3563efb9990091f76d4791b372 801 SUPERFAMILY SSF51011 600 681 2.45E-20 T 12-10-2018 N288_23045 6c550c3563efb9990091f76d4791b372 801 Pfam PF13802 Galactose mutarotase-like 147 216 9.3E-22 T 12-10-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain N288_23045 6c550c3563efb9990091f76d4791b372 801 SUPERFAMILY SSF51445 250 596 7.27E-71 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_23045 6c550c3563efb9990091f76d4791b372 801 Gene3D G3DSA:2.60.40.1180 683 795 2.3E-9 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_06390 0ab97c1c065460eed1b8e5b7996ba86e 233 Gene3D G3DSA:3.40.50.2300 1 124 1.1E-27 T 12-10-2018 N288_06390 0ab97c1c065460eed1b8e5b7996ba86e 233 SMART SM00850 135 233 1.4E-22 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 N288_06390 0ab97c1c065460eed1b8e5b7996ba86e 233 SUPERFAMILY SSF52172 1 124 2.85E-28 T 12-10-2018 IPR011006 CheY-like superfamily N288_06390 0ab97c1c065460eed1b8e5b7996ba86e 233 Pfam PF00072 Response regulator receiver domain 6 113 1.3E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_06390 0ab97c1c065460eed1b8e5b7996ba86e 233 Gene3D G3DSA:2.40.50.1020 125 226 6.3E-17 T 12-10-2018 N288_06390 0ab97c1c065460eed1b8e5b7996ba86e 233 SMART SM00448 2 113 1.7E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_06390 0ab97c1c065460eed1b8e5b7996ba86e 233 Pfam PF04397 LytTr DNA-binding domain 136 230 6.7E-21 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 N288_17170 200912d3fac2384b3e1fb3aa711bc9b9 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.7E-12 T 12-10-2018 N288_17170 200912d3fac2384b3e1fb3aa711bc9b9 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 1.7E-12 T 12-10-2018 N288_17170 200912d3fac2384b3e1fb3aa711bc9b9 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 1.7E-12 T 12-10-2018 N288_17170 200912d3fac2384b3e1fb3aa711bc9b9 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 1.7E-12 T 12-10-2018 N288_17170 200912d3fac2384b3e1fb3aa711bc9b9 323 Gene3D G3DSA:3.50.50.60 131 248 1.1E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_17170 200912d3fac2384b3e1fb3aa711bc9b9 323 TIGRFAM TIGR04018 Bthiol_YpdA: putative bacillithiol system oxidoreductase, YpdA family 5 318 1.5E-142 T 12-10-2018 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA N288_17170 200912d3fac2384b3e1fb3aa711bc9b9 323 SUPERFAMILY SSF51905 2 262 1.09E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_17170 200912d3fac2384b3e1fb3aa711bc9b9 323 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 289 3.3E-106 T 12-10-2018 N288_17170 200912d3fac2384b3e1fb3aa711bc9b9 323 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 183 6.2E-11 T 12-10-2018 N288_17170 200912d3fac2384b3e1fb3aa711bc9b9 323 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 121 130 6.2E-11 T 12-10-2018 N288_17170 200912d3fac2384b3e1fb3aa711bc9b9 323 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 6.2E-11 T 12-10-2018 N288_17170 200912d3fac2384b3e1fb3aa711bc9b9 323 Gene3D G3DSA:3.50.50.60 5 293 1.1E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_21075 2e9a4a4893a540aef673d4dad06254d4 524 Pfam PF03553 Na+/H+ antiporter family 160 490 2.4E-81 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 N288_25815 208afdf1756a70e4027fe72360cc58cd 408 SMART SM00228 305 394 4.4E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 N288_25815 208afdf1756a70e4027fe72360cc58cd 408 Gene3D G3DSA:2.30.42.10 308 406 2.4E-25 T 12-10-2018 N288_25815 208afdf1756a70e4027fe72360cc58cd 408 Gene3D G3DSA:2.40.10.10 186 307 9.4E-38 T 12-10-2018 N288_25815 208afdf1756a70e4027fe72360cc58cd 408 Pfam PF13365 Trypsin-like peptidase domain 120 267 1.6E-30 T 12-10-2018 N288_25815 208afdf1756a70e4027fe72360cc58cd 408 SUPERFAMILY SSF50494 81 301 1.58E-55 T 12-10-2018 IPR009003 Peptidase S1, PA clan N288_25815 208afdf1756a70e4027fe72360cc58cd 408 Gene3D G3DSA:2.40.10.10 70 185 2.2E-25 T 12-10-2018 N288_25815 208afdf1756a70e4027fe72360cc58cd 408 PRINTS PR00834 HtrA/DegQ protease family signature 238 255 1.3E-34 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_25815 208afdf1756a70e4027fe72360cc58cd 408 PRINTS PR00834 HtrA/DegQ protease family signature 153 173 1.3E-34 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_25815 208afdf1756a70e4027fe72360cc58cd 408 PRINTS PR00834 HtrA/DegQ protease family signature 351 363 1.3E-34 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_25815 208afdf1756a70e4027fe72360cc58cd 408 PRINTS PR00834 HtrA/DegQ protease family signature 260 277 1.3E-34 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_25815 208afdf1756a70e4027fe72360cc58cd 408 PRINTS PR00834 HtrA/DegQ protease family signature 194 218 1.3E-34 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_25815 208afdf1756a70e4027fe72360cc58cd 408 PRINTS PR00834 HtrA/DegQ protease family signature 132 144 1.3E-34 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_25815 208afdf1756a70e4027fe72360cc58cd 408 Pfam PF13180 PDZ domain 305 403 3.5E-17 T 12-10-2018 IPR001478 PDZ domain GO:0005515 N288_25815 208afdf1756a70e4027fe72360cc58cd 408 SUPERFAMILY SSF50156 286 403 1.31E-18 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 N288_24335 db206eea56b18b182ce4d11cfbea4f11 506 Gene3D G3DSA:3.40.1390.10 7 104 8.8E-17 T 12-10-2018 N288_24335 db206eea56b18b182ce4d11cfbea4f11 506 Gene3D G3DSA:3.90.190.20 342 498 3.2E-31 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 N288_24335 db206eea56b18b182ce4d11cfbea4f11 506 SUPERFAMILY SSF53244 340 495 4.58E-29 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 N288_24335 db206eea56b18b182ce4d11cfbea4f11 506 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 23 492 2.6E-106 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 N288_24335 db206eea56b18b182ce4d11cfbea4f11 506 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 11 492 26.099 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 N288_24335 db206eea56b18b182ce4d11cfbea4f11 506 SUPERFAMILY SSF53623 108 335 4.58E-61 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 N288_24335 db206eea56b18b182ce4d11cfbea4f11 506 Pfam PF01225 Mur ligase family, catalytic domain 24 83 1.4E-8 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 N288_24335 db206eea56b18b182ce4d11cfbea4f11 506 Gene3D G3DSA:3.40.1190.10 107 341 1.0E-68 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 N288_24335 db206eea56b18b182ce4d11cfbea4f11 506 Pfam PF08245 Mur ligase middle domain 115 318 6.4E-46 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 N288_24335 db206eea56b18b182ce4d11cfbea4f11 506 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 414 2.6E-12 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 N288_24335 db206eea56b18b182ce4d11cfbea4f11 506 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 113 136 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 N288_24335 db206eea56b18b182ce4d11cfbea4f11 506 SUPERFAMILY SSF63418 17 104 2.35E-16 T 12-10-2018 IPR035911 MurE/MurF, N-terminal N288_24140 1ca2e58c26b55d37f57b58b0318923ae 225 Pfam PF00072 Response regulator receiver domain 6 112 1.5E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_24140 1ca2e58c26b55d37f57b58b0318923ae 225 SMART SM00448 4 112 5.5E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_24140 1ca2e58c26b55d37f57b58b0318923ae 225 Gene3D G3DSA:3.40.50.2300 1 121 4.9E-31 T 12-10-2018 N288_24140 1ca2e58c26b55d37f57b58b0318923ae 225 SMART SM00862 147 223 2.8E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_24140 1ca2e58c26b55d37f57b58b0318923ae 225 SUPERFAMILY SSF52172 1 175 9.51E-33 T 12-10-2018 IPR011006 CheY-like superfamily N288_24140 1ca2e58c26b55d37f57b58b0318923ae 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 222 2.0E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_24140 1ca2e58c26b55d37f57b58b0318923ae 225 Gene3D G3DSA:1.10.10.10 122 225 2.4E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_05435 9527a2843eab58739f63125c22bbe576 442 SUPERFAMILY SSF103190 37 177 4.32E-5 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily N288_05435 9527a2843eab58739f63125c22bbe576 442 SMART SM00387 323 436 8.7E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_05435 9527a2843eab58739f63125c22bbe576 442 SUPERFAMILY SSF55874 294 425 6.73E-22 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_05435 9527a2843eab58739f63125c22bbe576 442 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 227 284 2.8E-13 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain N288_05435 9527a2843eab58739f63125c22bbe576 442 Gene3D G3DSA:1.10.287.130 218 280 2.5E-5 T 12-10-2018 N288_05435 9527a2843eab58739f63125c22bbe576 442 Gene3D G3DSA:3.30.565.10 281 433 4.1E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_05435 9527a2843eab58739f63125c22bbe576 442 Pfam PF14501 GHKL domain 324 433 2.1E-16 T 12-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain N288_03810 1db3e459491eb51744b158e5a771424c 356 TIGRFAM TIGR00378 cax: calcium/proton exchanger 13 354 1.6E-149 T 12-10-2018 IPR004798 Calcium/proton exchanger CAX GO:0006816|GO:0015369 N288_03810 1db3e459491eb51744b158e5a771424c 356 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 5 353 1.3E-121 T 12-10-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 N288_03810 1db3e459491eb51744b158e5a771424c 356 Gene3D G3DSA:1.20.1420.30 58 347 4.4E-26 T 12-10-2018 N288_03810 1db3e459491eb51744b158e5a771424c 356 Pfam PF01699 Sodium/calcium exchanger protein 211 349 1.9E-18 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 N288_03810 1db3e459491eb51744b158e5a771424c 356 Pfam PF01699 Sodium/calcium exchanger protein 27 179 2.2E-20 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 N288_03810 1db3e459491eb51744b158e5a771424c 356 Gene3D G3DSA:1.20.58.1130 36 243 4.4E-26 T 12-10-2018 N288_16790 dcf8d4ad75689d3b54ba06278df8d867 798 SUPERFAMILY SSF55486 573 795 3.44E-20 T 12-10-2018 N288_16790 dcf8d4ad75689d3b54ba06278df8d867 798 SUPERFAMILY SSF161098 75 233 9.29E-16 T 12-10-2018 IPR035906 MetI-like superfamily N288_16790 dcf8d4ad75689d3b54ba06278df8d867 798 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 296 4.4E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_16790 dcf8d4ad75689d3b54ba06278df8d867 798 Pfam PF01433 Peptidase family M1 domain 574 715 1.1E-8 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 N288_16790 dcf8d4ad75689d3b54ba06278df8d867 798 Gene3D G3DSA:1.10.3720.10 71 300 1.7E-20 T 12-10-2018 IPR035906 MetI-like superfamily N288_16790 dcf8d4ad75689d3b54ba06278df8d867 798 Gene3D G3DSA:1.10.390.60 566 796 8.8E-24 T 12-10-2018 N288_01305 2c2c77effb30dc183cce7018aa6b4dd0 192 SUPERFAMILY SSF52540 7 188 1.76E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_01305 2c2c77effb30dc183cce7018aa6b4dd0 192 Gene3D G3DSA:3.40.50.300 7 188 6.9E-49 T 12-10-2018 N288_01305 2c2c77effb30dc183cce7018aa6b4dd0 192 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 8 185 1.1E-44 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 N288_01305 2c2c77effb30dc183cce7018aa6b4dd0 192 PIRSF PIRSF006135 6 190 3.0E-45 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 N288_02095 69a6f181dd07df3b59542218e73db7bc 1065 Gene3D G3DSA:1.20.120.850 837 1058 2.0E-81 T 12-10-2018 N288_02095 69a6f181dd07df3b59542218e73db7bc 1065 Pfam PF08455 Bacterial SNF2 helicase associated 233 606 7.5E-87 T 12-10-2018 IPR013663 Helicase, SWF/SNF/SWI type, bacterial N288_02095 69a6f181dd07df3b59542218e73db7bc 1065 Gene3D G3DSA:3.40.50.300 822 1023 2.0E-81 T 12-10-2018 N288_02095 69a6f181dd07df3b59542218e73db7bc 1065 Pfam PF04434 SWIM zinc finger 61 89 6.3E-4 T 12-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 N288_02095 69a6f181dd07df3b59542218e73db7bc 1065 Pfam PF00176 SNF2 family N-terminal domain 632 887 6.1E-49 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 N288_02095 69a6f181dd07df3b59542218e73db7bc 1065 Gene3D G3DSA:3.40.50.10810 584 816 4.6E-60 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily N288_02095 69a6f181dd07df3b59542218e73db7bc 1065 SUPERFAMILY SSF52540 582 797 6.25E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_02095 69a6f181dd07df3b59542218e73db7bc 1065 SUPERFAMILY SSF52540 817 1064 2.18E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_02095 69a6f181dd07df3b59542218e73db7bc 1065 SMART SM00490 927 1009 6.4E-24 T 12-10-2018 IPR001650 Helicase, C-terminal N288_02095 69a6f181dd07df3b59542218e73db7bc 1065 Pfam PF00271 Helicase conserved C-terminal domain 898 1009 2.6E-22 T 12-10-2018 IPR001650 Helicase, C-terminal N288_02095 69a6f181dd07df3b59542218e73db7bc 1065 SMART SM00487 609 805 4.0E-29 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_22790 fe84d08b9eb3b52775e51695b8629c5d 315 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 100 314 3.7E-58 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 N288_22790 fe84d08b9eb3b52775e51695b8629c5d 315 Gene3D G3DSA:2.60.120.10 228 315 5.2E-30 T 12-10-2018 IPR014710 RmlC-like jelly roll fold N288_22790 fe84d08b9eb3b52775e51695b8629c5d 315 PIRSF PIRSF036894 2 315 9.5E-135 T 12-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 N288_22790 fe84d08b9eb3b52775e51695b8629c5d 315 SUPERFAMILY SSF51182 2 315 1.0E-106 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily N288_22790 fe84d08b9eb3b52775e51695b8629c5d 315 Pfam PF01238 Phosphomannose isomerase type I 5 197 3.8E-43 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 N288_22790 fe84d08b9eb3b52775e51695b8629c5d 315 Pfam PF01238 Phosphomannose isomerase type I 241 314 1.6E-6 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 N288_22790 fe84d08b9eb3b52775e51695b8629c5d 315 Gene3D G3DSA:2.60.120.10 1 226 4.7E-95 T 12-10-2018 IPR014710 RmlC-like jelly roll fold N288_10145 705afdeebaf2f42a0ccaf24f9f62d623 265 Pfam PF13277 YmdB-like protein 4 255 1.3E-110 T 12-10-2018 IPR005235 Metallophosphoesterase, YmdB-like N288_10145 705afdeebaf2f42a0ccaf24f9f62d623 265 SUPERFAMILY SSF56300 1 257 5.69E-89 T 12-10-2018 N288_10145 705afdeebaf2f42a0ccaf24f9f62d623 265 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 264 1.4E-109 T 12-10-2018 IPR005235 Metallophosphoesterase, YmdB-like N288_10145 705afdeebaf2f42a0ccaf24f9f62d623 265 PIRSF PIRSF004789 1 264 3.3E-103 T 12-10-2018 IPR005235 Metallophosphoesterase, YmdB-like N288_10145 705afdeebaf2f42a0ccaf24f9f62d623 265 Gene3D G3DSA:3.60.21.10 1 265 8.7E-116 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_24895 061a6c5fe0c6064a96840aa6e988eab3 237 SMART SM00866 83 222 1.0E-13 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 N288_24895 061a6c5fe0c6064a96840aa6e988eab3 237 Pfam PF07702 UTRA domain 88 213 4.2E-23 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 N288_24895 061a6c5fe0c6064a96840aa6e988eab3 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 1.4E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_24895 061a6c5fe0c6064a96840aa6e988eab3 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 1.4E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_24895 061a6c5fe0c6064a96840aa6e988eab3 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 66 2.8E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_24895 061a6c5fe0c6064a96840aa6e988eab3 237 Gene3D G3DSA:3.40.1410.10 79 225 8.7E-25 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily N288_24895 061a6c5fe0c6064a96840aa6e988eab3 237 SUPERFAMILY SSF64288 90 227 3.45E-29 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily N288_24895 061a6c5fe0c6064a96840aa6e988eab3 237 Gene3D G3DSA:1.10.10.10 1 70 7.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_24895 061a6c5fe0c6064a96840aa6e988eab3 237 SMART SM00345 7 66 9.6E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_24895 061a6c5fe0c6064a96840aa6e988eab3 237 SUPERFAMILY SSF46785 2 70 1.09E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_00650 83e42257ecf8ea2363ef330a970bd346 247 Pfam PF00588 SpoU rRNA Methylase family 96 236 9.9E-39 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 N288_00650 83e42257ecf8ea2363ef330a970bd346 247 Gene3D G3DSA:3.30.1330.30 1 73 2.2E-13 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like N288_00650 83e42257ecf8ea2363ef330a970bd346 247 SUPERFAMILY SSF75217 67 243 5.82E-50 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases N288_00650 83e42257ecf8ea2363ef330a970bd346 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 3 242 5.5E-84 T 12-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 N288_00650 83e42257ecf8ea2363ef330a970bd346 247 SUPERFAMILY SSF55315 3 76 1.08E-17 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like N288_00650 83e42257ecf8ea2363ef330a970bd346 247 Gene3D G3DSA:3.40.1280.10 74 243 1.1E-56 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal N288_00650 83e42257ecf8ea2363ef330a970bd346 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 5.0E-22 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 N288_00650 83e42257ecf8ea2363ef330a970bd346 247 SMART SM00967 5 79 9.2E-22 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 N288_07480 6b025eae0e58eba5d4ec8adbf983d728 410 Gene3D G3DSA:3.60.70.12 7 196 1.9E-67 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 N288_07480 6b025eae0e58eba5d4ec8adbf983d728 410 Gene3D G3DSA:3.30.2330.10 197 281 7.0E-33 T 12-10-2018 N288_07480 6b025eae0e58eba5d4ec8adbf983d728 410 Gene3D G3DSA:3.10.20.340 282 410 4.4E-49 T 12-10-2018 N288_07480 6b025eae0e58eba5d4ec8adbf983d728 410 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 410 144.239 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 N288_07480 6b025eae0e58eba5d4ec8adbf983d728 410 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 16 410 2.4E-156 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 N288_07480 6b025eae0e58eba5d4ec8adbf983d728 410 SUPERFAMILY SSF56266 21 406 9.81E-135 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 N288_07480 6b025eae0e58eba5d4ec8adbf983d728 410 Pfam PF01960 ArgJ family 26 410 3.3E-146 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 N288_07480 6b025eae0e58eba5d4ec8adbf983d728 410 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 37 410 2.0E-148 T 12-10-2018 N288_16470 10c6fe5f64be8955703e96ae938b5709 286 Pfam PF04909 Amidohydrolase 4 277 7.9E-34 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 N288_16470 10c6fe5f64be8955703e96ae938b5709 286 Gene3D G3DSA:3.20.20.140 1 278 7.7E-53 T 12-10-2018 N288_16470 10c6fe5f64be8955703e96ae938b5709 286 SUPERFAMILY SSF51556 1 277 1.54E-46 T 12-10-2018 IPR032466 Metal-dependent hydrolase N288_22735 46fbafcf532bd55dc6cafdf001f80ede 335 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 6 187 5.7E-81 T 12-10-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 N288_22735 46fbafcf532bd55dc6cafdf001f80ede 335 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 6 334 2.3E-154 T 12-10-2018 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 N288_22735 46fbafcf532bd55dc6cafdf001f80ede 335 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 242 334 2.4E-43 T 12-10-2018 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 N288_10265 43772955ddb2f71dfbf74e267c990c7f 418 Gene3D G3DSA:3.40.50.300 200 361 5.3E-32 T 12-10-2018 N288_10265 43772955ddb2f71dfbf74e267c990c7f 418 Pfam PF01926 50S ribosome-binding GTPase 200 319 1.1E-17 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_10265 43772955ddb2f71dfbf74e267c990c7f 418 Hamap MF_00900 GTPase HflX [hflX]. 28 386 46.707 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 N288_10265 43772955ddb2f71dfbf74e267c990c7f 418 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 9 356 8.5E-144 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 N288_10265 43772955ddb2f71dfbf74e267c990c7f 418 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 2.5E-8 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_10265 43772955ddb2f71dfbf74e267c990c7f 418 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 286 2.5E-8 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_10265 43772955ddb2f71dfbf74e267c990c7f 418 Gene3D G3DSA:3.40.50.11060 19 139 2.0E-42 T 12-10-2018 N288_10265 43772955ddb2f71dfbf74e267c990c7f 418 Pfam PF16360 GTP-binding GTPase Middle Region 115 193 9.1E-30 T 12-10-2018 IPR032305 GTP-binding protein, middle domain N288_10265 43772955ddb2f71dfbf74e267c990c7f 418 PIRSF PIRSF006809 1 417 3.3E-148 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 N288_10265 43772955ddb2f71dfbf74e267c990c7f 418 SUPERFAMILY SSF52540 198 366 5.01E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_10265 43772955ddb2f71dfbf74e267c990c7f 418 Pfam PF13167 GTP-binding GTPase N-terminal 26 113 1.8E-33 T 12-10-2018 IPR025121 GTPase HflX, N-terminal N288_09665 3d9a63eedfae346994723d37157aa82a 180 PIRSF PIRSF039093 1 180 1.9E-85 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 N288_09665 3d9a63eedfae346994723d37157aa82a 180 SUPERFAMILY SSF56235 3 179 3.87E-60 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_09665 3d9a63eedfae346994723d37157aa82a 180 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 180 1.4E-83 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 N288_09665 3d9a63eedfae346994723d37157aa82a 180 Gene3D G3DSA:3.60.20.10 2 180 2.0E-68 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_09665 3d9a63eedfae346994723d37157aa82a 180 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 180 41.694 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 N288_09665 3d9a63eedfae346994723d37157aa82a 180 Pfam PF00227 Proteasome subunit 5 178 5.1E-27 T 12-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 N288_20415 eb17fcaa05096fc6185df7998468b76d 582 SUPERFAMILY SSF52467 167 368 9.81E-9 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily N288_20415 eb17fcaa05096fc6185df7998468b76d 582 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 12 175 3.8E-40 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 N288_20415 eb17fcaa05096fc6185df7998468b76d 582 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 571 37.504 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 N288_20415 eb17fcaa05096fc6185df7998468b76d 582 Gene3D G3DSA:3.40.50.970 382 579 4.9E-66 T 12-10-2018 N288_20415 eb17fcaa05096fc6185df7998468b76d 582 SUPERFAMILY SSF52518 383 571 1.88E-28 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_20415 eb17fcaa05096fc6185df7998468b76d 582 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 446 2.5E-153 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 N288_20415 eb17fcaa05096fc6185df7998468b76d 582 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 439 543 1.6E-8 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 N288_20415 eb17fcaa05096fc6185df7998468b76d 582 Gene3D G3DSA:3.40.50.1220 199 379 2.9E-53 T 12-10-2018 N288_20415 eb17fcaa05096fc6185df7998468b76d 582 SUPERFAMILY SSF52518 9 180 1.62E-38 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_20415 eb17fcaa05096fc6185df7998468b76d 582 Pfam PF16582 Middle domain of thiamine pyrophosphate 222 404 3.4E-15 T 12-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 N288_20415 eb17fcaa05096fc6185df7998468b76d 582 PIRSF PIRSF004983 1 578 5.5E-198 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 N288_20415 eb17fcaa05096fc6185df7998468b76d 582 Gene3D G3DSA:3.40.50.970 1 174 1.4E-72 T 12-10-2018 N288_13690 2d358f9dbe53d6cabaa924569e1fcac1 294 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 265 1.1E-118 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 N288_13690 2d358f9dbe53d6cabaa924569e1fcac1 294 Gene3D G3DSA:3.90.550.10 1 290 1.4E-91 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_13690 2d358f9dbe53d6cabaa924569e1fcac1 294 Pfam PF00483 Nucleotidyl transferase 5 266 1.1E-30 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 N288_13690 2d358f9dbe53d6cabaa924569e1fcac1 294 SUPERFAMILY SSF53448 3 277 1.93E-66 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_24800 646d5d813909c4559e8c3e5c0c71e12b 396 Pfam PF12698 ABC-2 family transporter protein 15 360 1.1E-15 T 12-10-2018 N288_17295 5f17f5c048171399e83722c94a554f2c 590 SUPERFAMILY SSF55874 420 587 2.88E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_17295 5f17f5c048171399e83722c94a554f2c 590 Pfam PF00672 HAMP domain 195 241 8.3E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_17295 5f17f5c048171399e83722c94a554f2c 590 Gene3D G3DSA:1.20.1480.50 156 248 6.4E-20 T 12-10-2018 N288_17295 5f17f5c048171399e83722c94a554f2c 590 Gene3D G3DSA:3.30.450.20 249 359 4.8E-10 T 12-10-2018 N288_17295 5f17f5c048171399e83722c94a554f2c 590 SMART SM00388 364 431 4.1E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_17295 5f17f5c048171399e83722c94a554f2c 590 Gene3D G3DSA:1.10.287.130 360 436 3.3E-25 T 12-10-2018 N288_17295 5f17f5c048171399e83722c94a554f2c 590 Gene3D G3DSA:3.30.565.10 438 589 1.1E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_17295 5f17f5c048171399e83722c94a554f2c 590 SUPERFAMILY SSF158472 195 242 1.57E-10 T 12-10-2018 N288_17295 5f17f5c048171399e83722c94a554f2c 590 SMART SM00304 194 246 6.2E-14 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_17295 5f17f5c048171399e83722c94a554f2c 590 Pfam PF00512 His Kinase A (phospho-acceptor) domain 365 431 6.8E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_17295 5f17f5c048171399e83722c94a554f2c 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 528 5.6E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_17295 5f17f5c048171399e83722c94a554f2c 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 542 5.6E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_17295 5f17f5c048171399e83722c94a554f2c 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 586 5.6E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_17295 5f17f5c048171399e83722c94a554f2c 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 567 5.6E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_17295 5f17f5c048171399e83722c94a554f2c 590 SMART SM00091 253 320 0.002 T 12-10-2018 IPR000014 PAS domain N288_17295 5f17f5c048171399e83722c94a554f2c 590 SUPERFAMILY SSF47384 348 432 3.14E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_17295 5f17f5c048171399e83722c94a554f2c 590 SUPERFAMILY SSF55785 241 356 2.56E-8 T 12-10-2018 IPR035965 PAS domain superfamily N288_17295 5f17f5c048171399e83722c94a554f2c 590 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 478 587 3.1E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_17295 5f17f5c048171399e83722c94a554f2c 590 SMART SM00387 477 589 6.2E-44 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_04990 75a1d25681f08c7510befa6487240eb9 543 Gene3D G3DSA:3.40.50.300 90 227 5.2E-29 T 12-10-2018 N288_04990 75a1d25681f08c7510befa6487240eb9 543 SUPERFAMILY SSF52540 4 203 2.81E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_04990 75a1d25681f08c7510befa6487240eb9 543 Pfam PF00005 ABC transporter 311 437 8.5E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_04990 75a1d25681f08c7510befa6487240eb9 543 Pfam PF00005 ABC transporter 21 70 1.0E-12 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_04990 75a1d25681f08c7510befa6487240eb9 543 Gene3D G3DSA:3.40.50.300 1 89 7.6E-18 T 12-10-2018 N288_04990 75a1d25681f08c7510befa6487240eb9 543 Gene3D G3DSA:3.40.50.300 253 512 1.7E-46 T 12-10-2018 N288_04990 75a1d25681f08c7510befa6487240eb9 543 Pfam PF12848 ABC transporter 174 268 2.0E-9 T 12-10-2018 IPR032781 ABC-transporter extension domain N288_04990 75a1d25681f08c7510befa6487240eb9 543 SMART SM00382 29 186 1.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_04990 75a1d25681f08c7510befa6487240eb9 543 SMART SM00382 318 491 7.3E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_04990 75a1d25681f08c7510befa6487240eb9 543 SUPERFAMILY SSF52540 281 490 1.49E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_16045 6a2a1b97b742b174d8a5ab1c092958cf 258 SUPERFAMILY SSF55797 135 255 2.35E-28 T 12-10-2018 IPR035940 CAP superfamily N288_16045 6a2a1b97b742b174d8a5ab1c092958cf 258 Pfam PF00188 Cysteine-rich secretory protein family 143 254 5.4E-23 T 12-10-2018 IPR014044 CAP domain N288_16045 6a2a1b97b742b174d8a5ab1c092958cf 258 Gene3D G3DSA:3.40.33.10 17 256 7.8E-68 T 12-10-2018 IPR035940 CAP superfamily N288_16045 6a2a1b97b742b174d8a5ab1c092958cf 258 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 135 257 1.4E-59 T 12-10-2018 IPR014258 CAP domain, YkwD-like N288_09900 2e1180c8b0029874e822d968e371bb0a 425 Pfam PF13180 PDZ domain 209 267 6.2E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 N288_09900 2e1180c8b0029874e822d968e371bb0a 425 SUPERFAMILY SSF50156 174 268 1.18E-17 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 N288_09900 2e1180c8b0029874e822d968e371bb0a 425 Pfam PF02163 Peptidase family M50 6 410 5.0E-81 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 N288_09900 2e1180c8b0029874e822d968e371bb0a 425 SMART SM00228 185 259 7.7E-6 T 12-10-2018 IPR001478 PDZ domain GO:0005515 N288_09900 2e1180c8b0029874e822d968e371bb0a 425 Gene3D G3DSA:2.30.42.10 202 296 3.6E-19 T 12-10-2018 N288_09900 2e1180c8b0029874e822d968e371bb0a 425 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 423 9.4E-115 T 12-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 N288_07285 4093ef931910a332de01248c2e9a9961 974 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 541 703 2.8E-34 T 12-10-2018 IPR000160 GGDEF domain N288_07285 4093ef931910a332de01248c2e9a9961 974 SMART SM00052 714 960 1.3E-113 T 12-10-2018 IPR001633 EAL domain N288_07285 4093ef931910a332de01248c2e9a9961 974 SMART SM01204 222 351 2.3E-14 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 N288_07285 4093ef931910a332de01248c2e9a9961 974 Pfam PF10442 FIST C domain 222 349 2.7E-15 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 N288_07285 4093ef931910a332de01248c2e9a9961 974 SMART SM00091 420 486 1.7E-12 T 12-10-2018 IPR000014 PAS domain N288_07285 4093ef931910a332de01248c2e9a9961 974 SMART SM00267 532 704 6.6E-53 T 12-10-2018 IPR000160 GGDEF domain N288_07285 4093ef931910a332de01248c2e9a9961 974 Gene3D G3DSA:3.30.70.270 538 716 6.8E-52 T 12-10-2018 N288_07285 4093ef931910a332de01248c2e9a9961 974 Gene3D G3DSA:3.30.450.20 408 537 9.3E-23 T 12-10-2018 N288_07285 4093ef931910a332de01248c2e9a9961 974 Pfam PF00563 EAL domain 722 955 3.9E-77 T 12-10-2018 IPR001633 EAL domain N288_07285 4093ef931910a332de01248c2e9a9961 974 SUPERFAMILY SSF141868 719 966 2.22E-90 T 12-10-2018 IPR035919 EAL domain superfamily N288_07285 4093ef931910a332de01248c2e9a9961 974 SUPERFAMILY SSF55073 549 705 1.57E-44 T 12-10-2018 IPR029787 Nucleotide cyclase N288_07285 4093ef931910a332de01248c2e9a9961 974 Gene3D G3DSA:3.20.20.450 717 968 1.7E-102 T 12-10-2018 IPR035919 EAL domain superfamily N288_07285 4093ef931910a332de01248c2e9a9961 974 SMART SM00897 29 221 9.0E-32 T 12-10-2018 IPR013702 FIST domain, N-terminal N288_07285 4093ef931910a332de01248c2e9a9961 974 SUPERFAMILY SSF55785 408 530 3.66E-21 T 12-10-2018 IPR035965 PAS domain superfamily N288_07285 4093ef931910a332de01248c2e9a9961 974 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 418 538 1.7E-21 T 12-10-2018 IPR000014 PAS domain N288_07285 4093ef931910a332de01248c2e9a9961 974 Pfam PF08495 FIST N domain 31 220 8.5E-28 T 12-10-2018 IPR013702 FIST domain, N-terminal N288_07285 4093ef931910a332de01248c2e9a9961 974 Pfam PF08448 PAS fold 426 534 3.3E-13 T 12-10-2018 IPR013656 PAS fold-4 N288_07285 4093ef931910a332de01248c2e9a9961 974 Pfam PF00990 Diguanylate cyclase, GGDEF domain 543 700 4.3E-42 T 12-10-2018 IPR000160 GGDEF domain N288_05915 ed9221bdd8f7c98ec875cff0373d3c77 252 Pfam PF00072 Response regulator receiver domain 4 115 2.7E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_05915 ed9221bdd8f7c98ec875cff0373d3c77 252 Gene3D G3DSA:3.40.50.2300 1 131 3.7E-29 T 12-10-2018 N288_05915 ed9221bdd8f7c98ec875cff0373d3c77 252 Pfam PF12833 Helix-turn-helix domain 168 246 1.4E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_05915 ed9221bdd8f7c98ec875cff0373d3c77 252 Gene3D G3DSA:1.10.10.60 142 199 3.1E-14 T 12-10-2018 N288_05915 ed9221bdd8f7c98ec875cff0373d3c77 252 SMART SM00448 1 115 4.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_05915 ed9221bdd8f7c98ec875cff0373d3c77 252 SUPERFAMILY SSF46689 198 246 1.57E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_05915 ed9221bdd8f7c98ec875cff0373d3c77 252 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 199 241 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 N288_05915 ed9221bdd8f7c98ec875cff0373d3c77 252 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 214 229 5.5E-8 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 N288_05915 ed9221bdd8f7c98ec875cff0373d3c77 252 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 229 245 5.5E-8 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 N288_05915 ed9221bdd8f7c98ec875cff0373d3c77 252 SUPERFAMILY SSF46689 147 196 6.54E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_05915 ed9221bdd8f7c98ec875cff0373d3c77 252 SMART SM00342 162 245 2.8E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_05915 ed9221bdd8f7c98ec875cff0373d3c77 252 Gene3D G3DSA:1.10.10.2730 200 246 1.7E-23 T 12-10-2018 N288_05915 ed9221bdd8f7c98ec875cff0373d3c77 252 SUPERFAMILY SSF52172 2 121 9.11E-30 T 12-10-2018 IPR011006 CheY-like superfamily N288_03330 e95cfdf4aaad11cc38df503bc3854b83 627 Pfam PF00005 ABC transporter 354 479 1.7E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_03330 e95cfdf4aaad11cc38df503bc3854b83 627 SUPERFAMILY SSF52540 8 238 1.84E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_03330 e95cfdf4aaad11cc38df503bc3854b83 627 Gene3D G3DSA:3.40.50.300 298 560 2.3E-60 T 12-10-2018 N288_03330 e95cfdf4aaad11cc38df503bc3854b83 627 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_03330 e95cfdf4aaad11cc38df503bc3854b83 627 Pfam PF00005 ABC transporter 20 191 6.1E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_03330 e95cfdf4aaad11cc38df503bc3854b83 627 Pfam PF12848 ABC transporter 230 323 1.7E-23 T 12-10-2018 IPR032781 ABC-transporter extension domain N288_03330 e95cfdf4aaad11cc38df503bc3854b83 627 SMART SM00382 28 236 1.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_03330 e95cfdf4aaad11cc38df503bc3854b83 627 SMART SM00382 359 530 6.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_03330 e95cfdf4aaad11cc38df503bc3854b83 627 Gene3D G3DSA:3.40.50.300 6 285 3.8E-71 T 12-10-2018 N288_03330 e95cfdf4aaad11cc38df503bc3854b83 627 SUPERFAMILY SSF52540 320 537 2.35E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00475 976a9471d892f296bbb005c0779f0bdc 278 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 21 270 1.6E-97 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 N288_00475 976a9471d892f296bbb005c0779f0bdc 278 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 21 36 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_00475 976a9471d892f296bbb005c0779f0bdc 278 Pfam PF00809 Pterin binding enzyme 22 255 1.3E-83 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_00475 976a9471d892f296bbb005c0779f0bdc 278 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 55 68 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_00475 976a9471d892f296bbb005c0779f0bdc 278 Gene3D G3DSA:3.20.20.20 2 275 2.2E-114 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_00475 976a9471d892f296bbb005c0779f0bdc 278 SUPERFAMILY SSF51717 7 272 2.35E-101 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_20720 bbc4b106ffd42febc4fd6fc225a459b8 389 Gene3D G3DSA:3.90.1150.10 14 384 5.5E-150 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_20720 bbc4b106ffd42febc4fd6fc225a459b8 389 Gene3D G3DSA:3.40.640.10 69 292 5.5E-150 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_20720 bbc4b106ffd42febc4fd6fc225a459b8 389 Pfam PF00155 Aminotransferase class I and II 39 384 5.0E-38 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 N288_20720 bbc4b106ffd42febc4fd6fc225a459b8 389 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 6 388 7.7E-150 T 12-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 N288_20720 bbc4b106ffd42febc4fd6fc225a459b8 389 SUPERFAMILY SSF53383 4 385 1.65E-96 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_10030 752a77328f49b0e4a3cadb3c156a2ac0 289 Gene3D G3DSA:3.20.20.70 1 289 5.5E-111 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_10030 752a77328f49b0e4a3cadb3c156a2ac0 289 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 289 63.306 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 N288_10030 752a77328f49b0e4a3cadb3c156a2ac0 289 Pfam PF00701 Dihydrodipicolinate synthetase family 4 285 7.4E-107 T 12-10-2018 IPR002220 DapA-like GO:0016829 N288_10030 752a77328f49b0e4a3cadb3c156a2ac0 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 9.0E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 N288_10030 752a77328f49b0e4a3cadb3c156a2ac0 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 9.0E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 N288_10030 752a77328f49b0e4a3cadb3c156a2ac0 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 9.0E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 N288_10030 752a77328f49b0e4a3cadb3c156a2ac0 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 9.0E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 N288_10030 752a77328f49b0e4a3cadb3c156a2ac0 289 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 12-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 N288_10030 752a77328f49b0e4a3cadb3c156a2ac0 289 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 N288_10030 752a77328f49b0e4a3cadb3c156a2ac0 289 PIRSF PIRSF001365 1 289 2.2E-96 T 12-10-2018 IPR002220 DapA-like GO:0016829 N288_10030 752a77328f49b0e4a3cadb3c156a2ac0 289 SUPERFAMILY SSF51569 2 288 5.34E-100 T 12-10-2018 N288_10030 752a77328f49b0e4a3cadb3c156a2ac0 289 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 283 1.2E-109 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 N288_10030 752a77328f49b0e4a3cadb3c156a2ac0 289 SMART SM01130 3 287 3.2E-133 T 12-10-2018 IPR002220 DapA-like GO:0016829 N288_14520 5efb020a019cbbd4d8c44982702e296c 232 SMART SM00862 152 225 8.9E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_14520 5efb020a019cbbd4d8c44982702e296c 232 Gene3D G3DSA:1.10.10.10 127 231 1.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_14520 5efb020a019cbbd4d8c44982702e296c 232 Gene3D G3DSA:3.40.50.2300 1 126 1.8E-31 T 12-10-2018 N288_14520 5efb020a019cbbd4d8c44982702e296c 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 1.6E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_14520 5efb020a019cbbd4d8c44982702e296c 232 Pfam PF00072 Response regulator receiver domain 4 112 7.5E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_14520 5efb020a019cbbd4d8c44982702e296c 232 SUPERFAMILY SSF52172 1 127 2.13E-34 T 12-10-2018 IPR011006 CheY-like superfamily N288_14520 5efb020a019cbbd4d8c44982702e296c 232 SMART SM00448 2 112 7.3E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_14520 5efb020a019cbbd4d8c44982702e296c 232 SUPERFAMILY SSF46894 128 225 3.68E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 Pfam PF00873 AcrB/AcrD/AcrF family 2 1009 9.8E-153 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 SUPERFAMILY SSF82866 791 1011 7.59E-46 T 12-10-2018 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 Gene3D G3DSA:3.30.70.1430 38 804 7.4E-226 T 12-10-2018 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 SUPERFAMILY SSF82866 294 485 1.29E-32 T 12-10-2018 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 SUPERFAMILY SSF82693 42 130 1.48E-18 T 12-10-2018 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 SUPERFAMILY SSF82693 138 318 1.86E-6 T 12-10-2018 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 Gene3D G3DSA:1.20.1640.10 11 499 7.4E-226 T 12-10-2018 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 Gene3D G3DSA:3.30.2090.10 704 796 7.4E-226 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 Gene3D G3DSA:3.30.70.1440 657 850 7.4E-226 T 12-10-2018 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 SUPERFAMILY SSF82714 181 260 8.63E-6 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 PRINTS PR00702 Acriflavin resistance protein family signature 352 373 7.1E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 PRINTS PR00702 Acriflavin resistance protein family signature 458 481 7.1E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 7.1E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 PRINTS PR00702 Acriflavin resistance protein family signature 433 456 7.1E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 7.1E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 PRINTS PR00702 Acriflavin resistance protein family signature 380 404 7.1E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 PRINTS PR00702 Acriflavin resistance protein family signature 538 555 7.1E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 Gene3D G3DSA:3.30.70.1320 132 320 7.4E-226 T 12-10-2018 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 SUPERFAMILY SSF82693 552 651 5.49E-7 T 12-10-2018 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 Gene3D G3DSA:3.30.70.1430 555 656 7.4E-226 T 12-10-2018 N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 Gene3D G3DSA:3.30.2090.10 176 267 7.4E-226 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains N288_10905 99a27f92dda4618bbdb1ddde61139bfe 1017 Gene3D G3DSA:1.20.1640.10 500 1007 7.4E-226 T 12-10-2018 N288_05080 94bcd03783e3132fff513068c9344bf3 381 Pfam PF02595 Glycerate kinase family 3 373 1.5E-150 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 N288_05080 94bcd03783e3132fff513068c9344bf3 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 4.0E-162 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 N288_05080 94bcd03783e3132fff513068c9344bf3 381 PIRSF PIRSF006078 1 377 3.6E-141 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 N288_05080 94bcd03783e3132fff513068c9344bf3 381 Gene3D G3DSA:3.90.1510.10 42 276 9.4E-142 T 12-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 N288_05080 94bcd03783e3132fff513068c9344bf3 381 SUPERFAMILY SSF110738 1 376 2.09E-143 T 12-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 N288_05080 94bcd03783e3132fff513068c9344bf3 381 Gene3D G3DSA:3.40.50.10350 1 361 9.4E-142 T 12-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold N288_04705 ee2c28a7b11f3ae9e682f2deedb25560 145 Pfam PF08818 Domain of unknown function (DU1801) 27 131 5.6E-13 T 12-10-2018 IPR014922 Domain of unknown function DUF1801 N288_04705 ee2c28a7b11f3ae9e682f2deedb25560 145 SUPERFAMILY SSF159888 14 117 3.14E-16 T 12-10-2018 N288_15540 78d3eb08876d27b14c366f7cb5eb78ae 507 SUPERFAMILY SSF55486 6 505 3.18E-48 T 12-10-2018 N288_15540 78d3eb08876d27b14c366f7cb5eb78ae 507 Pfam PF01432 Peptidase family M3 269 351 1.9E-4 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 N288_15540 78d3eb08876d27b14c366f7cb5eb78ae 507 Gene3D G3DSA:1.10.1370.30 3 449 1.1E-35 T 12-10-2018 N288_00370 4850468e01a58337a4a7e8f3039ae1f0 486 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 205 1.2E-20 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 N288_00370 4850468e01a58337a4a7e8f3039ae1f0 486 Gene3D G3DSA:3.40.1010.10 4 108 1.5E-7 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 N288_00370 4850468e01a58337a4a7e8f3039ae1f0 486 TIGRFAM TIGR00444 mazG: MazG family protein 238 482 4.7E-104 T 12-10-2018 IPR011551 NTP pyrophosphohydrolase MazG N288_00370 4850468e01a58337a4a7e8f3039ae1f0 486 SUPERFAMILY SSF101386 230 333 7.71E-27 T 12-10-2018 N288_00370 4850468e01a58337a4a7e8f3039ae1f0 486 Gene3D G3DSA:1.10.287.1080 355 485 2.7E-42 T 12-10-2018 N288_00370 4850468e01a58337a4a7e8f3039ae1f0 486 SUPERFAMILY SSF101386 363 461 8.04E-23 T 12-10-2018 N288_00370 4850468e01a58337a4a7e8f3039ae1f0 486 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 394 453 3.7E-6 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core N288_00370 4850468e01a58337a4a7e8f3039ae1f0 486 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 254 327 1.3E-30 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core N288_00370 4850468e01a58337a4a7e8f3039ae1f0 486 SUPERFAMILY SSF53790 3 262 3.49E-29 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 N288_00370 4850468e01a58337a4a7e8f3039ae1f0 486 PIRSF PIRSF002845 1 485 8.7E-217 T 12-10-2018 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted N288_00370 4850468e01a58337a4a7e8f3039ae1f0 486 Gene3D G3DSA:1.10.287.1080 228 351 5.8E-45 T 12-10-2018 N288_02525 5486fa6a9328d6d944daa6937963e44b 681 SUPERFAMILY SSF56634 10 512 2.62E-222 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_02525 5486fa6a9328d6d944daa6937963e44b 681 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 359 367 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_02525 5486fa6a9328d6d944daa6937963e44b 681 SMART SM01060 29 417 7.7E-276 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_02525 5486fa6a9328d6d944daa6937963e44b 681 ProSitePatterns PS00438 Catalase proximal active site signature. 65 81 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_02525 5486fa6a9328d6d944daa6937963e44b 681 PIRSF PIRSF038927 1 681 0.0 T 12-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 N288_02525 5486fa6a9328d6d944daa6937963e44b 681 Pfam PF00199 Catalase 29 413 4.6E-181 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_02525 5486fa6a9328d6d944daa6937963e44b 681 Gene3D G3DSA:3.40.50.880 531 681 1.9E-35 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_02525 5486fa6a9328d6d944daa6937963e44b 681 SUPERFAMILY SSF52317 538 678 4.23E-13 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_02525 5486fa6a9328d6d944daa6937963e44b 681 Gene3D G3DSA:1.20.1370.20 440 530 2.4E-30 T 12-10-2018 N288_02525 5486fa6a9328d6d944daa6937963e44b 681 Pfam PF06628 Catalase-related immune-responsive 444 507 3.2E-20 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_02525 5486fa6a9328d6d944daa6937963e44b 681 Gene3D G3DSA:2.40.180.10 1 439 2.6E-211 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 N288_02525 5486fa6a9328d6d944daa6937963e44b 681 PRINTS PR00067 Catalase signature 126 143 8.2E-71 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_02525 5486fa6a9328d6d944daa6937963e44b 681 PRINTS PR00067 Catalase signature 42 65 8.2E-71 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_02525 5486fa6a9328d6d944daa6937963e44b 681 PRINTS PR00067 Catalase signature 314 341 8.2E-71 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_02525 5486fa6a9328d6d944daa6937963e44b 681 PRINTS PR00067 Catalase signature 346 372 8.2E-71 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_02525 5486fa6a9328d6d944daa6937963e44b 681 PRINTS PR00067 Catalase signature 105 123 8.2E-71 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_02525 5486fa6a9328d6d944daa6937963e44b 681 PRINTS PR00067 Catalase signature 145 163 8.2E-71 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_00105 1d20f7e57023595b2df0d3f901e19ab2 426 PIRSF PIRSF001529 1 426 2.4E-192 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 N288_00105 1d20f7e57023595b2df0d3f901e19ab2 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 223 400 3.5E-37 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_00105 1d20f7e57023595b2df0d3f901e19ab2 426 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 5.4E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 N288_00105 1d20f7e57023595b2df0d3f901e19ab2 426 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 5.4E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 N288_00105 1d20f7e57023595b2df0d3f901e19ab2 426 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 5.4E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 N288_00105 1d20f7e57023595b2df0d3f901e19ab2 426 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 5.4E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 N288_00105 1d20f7e57023595b2df0d3f901e19ab2 426 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 5.4E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 N288_00105 1d20f7e57023595b2df0d3f901e19ab2 426 SUPERFAMILY SSF55681 117 422 7.47E-107 T 12-10-2018 N288_00105 1d20f7e57023595b2df0d3f901e19ab2 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 4.6E-34 T 12-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 N288_00105 1d20f7e57023595b2df0d3f901e19ab2 426 Gene3D G3DSA:3.30.930.10 106 426 1.0E-129 T 12-10-2018 N288_00105 1d20f7e57023595b2df0d3f901e19ab2 426 Gene3D G3DSA:1.10.287.40 1 105 8.8E-27 T 12-10-2018 N288_00105 1d20f7e57023595b2df0d3f901e19ab2 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 4.4E-181 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 N288_00105 1d20f7e57023595b2df0d3f901e19ab2 426 SUPERFAMILY SSF46589 1 113 1.67E-33 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 N288_00105 1d20f7e57023595b2df0d3f901e19ab2 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 43.948 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 N288_15315 603c444f77f961f6a099333204834eb0 804 SUPERFAMILY SSF81665 262 777 3.27E-13 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 N288_15315 603c444f77f961f6a099333204834eb0 804 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 502 508 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 N288_15315 603c444f77f961f6a099333204834eb0 804 PRINTS PR00942 Copper-transporting ATPase 1 signature 214 239 6.6E-15 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 PRINTS PR00942 Copper-transporting ATPase 1 signature 7 32 6.6E-15 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 PRINTS PR00942 Copper-transporting ATPase 1 signature 33 56 6.6E-15 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 Gene3D G3DSA:3.30.70.100 73 149 2.6E-23 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 Gene3D G3DSA:2.70.150.20 291 403 5.3E-44 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 212 800 4.4E-184 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 Pfam PF00403 Heavy-metal-associated domain 78 137 7.0E-15 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 N288_15315 603c444f77f961f6a099333204834eb0 804 Pfam PF00403 Heavy-metal-associated domain 10 70 7.6E-15 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 N288_15315 603c444f77f961f6a099333204834eb0 804 Gene3D G3DSA:3.40.1110.10 511 629 2.4E-93 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 N288_15315 603c444f77f961f6a099333204834eb0 804 SUPERFAMILY SSF55008 3 72 1.7E-20 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 N288_15315 603c444f77f961f6a099333204834eb0 804 ProSitePatterns PS01047 Heavy-metal-associated domain. 80 109 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 N288_15315 603c444f77f961f6a099333204834eb0 804 SUPERFAMILY SSF81653 302 398 9.94E-30 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 N288_15315 603c444f77f961f6a099333204834eb0 804 ProSitePatterns PS01047 Heavy-metal-associated domain. 12 41 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 N288_15315 603c444f77f961f6a099333204834eb0 804 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 271 780 1.5E-94 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 N288_15315 603c444f77f961f6a099333204834eb0 804 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 500 514 1.2E-27 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 644 654 1.2E-27 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 697 716 1.2E-27 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 720 732 1.2E-27 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 348 362 1.2E-27 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 622 633 1.2E-27 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 231 799 3.8E-199 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 N288_15315 603c444f77f961f6a099333204834eb0 804 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 75 139 8.8E-9 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 N288_15315 603c444f77f961f6a099333204834eb0 804 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 9 71 2.6E-13 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 N288_15315 603c444f77f961f6a099333204834eb0 804 Pfam PF00122 E1-E2 ATPase 299 479 1.1E-59 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 Gene3D G3DSA:3.30.70.100 2 72 4.6E-22 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 PRINTS PR00943 Copper-transporting ATPase signature 674 691 2.1E-17 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 PRINTS PR00943 Copper-transporting ATPase signature 268 287 2.1E-17 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 PRINTS PR00943 Copper-transporting ATPase signature 119 139 2.1E-17 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 PRINTS PR00943 Copper-transporting ATPase signature 288 306 2.1E-17 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 PRINTS PR00943 Copper-transporting ATPase signature 483 498 2.1E-17 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 PRINTS PR00943 Copper-transporting ATPase signature 216 235 2.1E-17 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 PRINTS PR00943 Copper-transporting ATPase signature 421 435 2.1E-17 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 PRINTS PR00943 Copper-transporting ATPase signature 731 745 2.1E-17 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 Pfam PF00702 haloacid dehalogenase-like hydrolase 496 711 4.7E-45 T 12-10-2018 N288_15315 603c444f77f961f6a099333204834eb0 804 SUPERFAMILY SSF55008 74 142 3.53E-21 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 N288_15315 603c444f77f961f6a099333204834eb0 804 SUPERFAMILY SSF56784 498 797 9.9E-63 T 12-10-2018 IPR036412 HAD-like superfamily N288_15315 603c444f77f961f6a099333204834eb0 804 Gene3D G3DSA:3.40.50.1000 481 749 2.4E-93 T 12-10-2018 IPR023214 HAD superfamily N288_18095 7ad338bafca0f10fb0983a68494013f4 106 SUPERFAMILY SSF89957 2 103 1.96E-29 T 12-10-2018 IPR029756 MTH1187/YkoF-like N288_18095 7ad338bafca0f10fb0983a68494013f4 106 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 2 101 1.5E-32 T 12-10-2018 IPR002767 Thiamine-binding protein N288_18095 7ad338bafca0f10fb0983a68494013f4 106 Pfam PF01910 Thiamine-binding protein 4 99 2.0E-32 T 12-10-2018 IPR002767 Thiamine-binding protein N288_18095 7ad338bafca0f10fb0983a68494013f4 106 Gene3D G3DSA:3.30.70.930 1 104 9.8E-36 T 12-10-2018 IPR029756 MTH1187/YkoF-like N288_23150 cdd0cbaba315754ec209afdceb0e0086 690 Pfam PF00350 Dynamin family 86 267 1.0E-14 T 12-10-2018 IPR022812 Dynamin superfamily N288_23150 cdd0cbaba315754ec209afdceb0e0086 690 SUPERFAMILY SSF52540 77 355 2.6E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_11895 869cd4288fa707701e91440b8769c87d 348 Pfam PF00581 Rhodanese-like domain 9 124 3.2E-10 T 12-10-2018 IPR001763 Rhodanese-like domain N288_11895 869cd4288fa707701e91440b8769c87d 348 SMART SM00450 5 131 8.5E-14 T 12-10-2018 IPR001763 Rhodanese-like domain N288_11895 869cd4288fa707701e91440b8769c87d 348 Gene3D G3DSA:3.40.50.300 137 345 1.0E-7 T 12-10-2018 N288_11895 869cd4288fa707701e91440b8769c87d 348 SUPERFAMILY SSF52821 5 132 1.7E-21 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_11895 869cd4288fa707701e91440b8769c87d 348 Gene3D G3DSA:3.40.250.10 4 132 1.4E-38 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_11895 869cd4288fa707701e91440b8769c87d 348 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 20 316 4.4E-93 T 12-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 N288_11895 869cd4288fa707701e91440b8769c87d 348 SUPERFAMILY SSF52540 139 285 3.14E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 Gene3D G3DSA:3.30.565.10 323 474 4.5E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 SMART SM00086 212 252 53.0 T 12-10-2018 IPR001610 PAC motif N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 SMART SM00086 93 131 1.4E-4 T 12-10-2018 IPR001610 PAC motif N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 1.6E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 473 1.6E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 421 1.6E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 435 1.6E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 SUPERFAMILY SSF55874 317 474 5.5E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 SMART SM00387 370 475 8.4E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 Gene3D G3DSA:3.30.450.20 25 130 3.2E-25 T 12-10-2018 N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 SUPERFAMILY SSF47384 263 324 8.44E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 SUPERFAMILY SSF55785 129 250 1.8E-15 T 12-10-2018 IPR035965 PAS domain superfamily N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 Pfam PF13426 PAS domain 157 250 6.1E-9 T 12-10-2018 IPR000014 PAS domain N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 SMART SM00091 143 210 2.7E-8 T 12-10-2018 IPR000014 PAS domain N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 SMART SM00091 22 88 1.5E-7 T 12-10-2018 IPR000014 PAS domain N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 SUPERFAMILY SSF55785 33 130 2.54E-21 T 12-10-2018 IPR035965 PAS domain superfamily N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 Pfam PF08447 PAS fold 45 115 8.3E-14 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 Gene3D G3DSA:1.10.287.130 252 322 1.2E-21 T 12-10-2018 N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 324 1.8E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 473 1.5E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 Gene3D G3DSA:3.30.450.20 131 250 9.6E-17 T 12-10-2018 N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 259 1.0E-15 T 12-10-2018 IPR000014 PAS domain N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 137 1.0E-16 T 12-10-2018 IPR000014 PAS domain N288_21845 f711440cec1aff38dbcc0e1cead726dd 475 SMART SM00388 267 328 5.9E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_01325 7d6d834a52ab9b93089a98a57b681c68 142 Gene3D G3DSA:3.40.50.300 16 142 4.4E-11 T 12-10-2018 N288_01325 7d6d834a52ab9b93089a98a57b681c68 142 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 21 140 6.3E-12 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 N288_01325 7d6d834a52ab9b93089a98a57b681c68 142 SUPERFAMILY SSF52540 1 142 1.86E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_17575 05c0ff9a4598afd3aed1a954b41f2fbe 419 SUPERFAMILY SSF100879 258 356 8.44E-15 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 N288_17575 05c0ff9a4598afd3aed1a954b41f2fbe 419 Pfam PF11799 impB/mucB/samB family C-terminal domain 258 363 1.0E-16 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 N288_17575 05c0ff9a4598afd3aed1a954b41f2fbe 419 Gene3D G3DSA:2.30.40.20 29 83 2.4E-31 T 12-10-2018 N288_17575 05c0ff9a4598afd3aed1a954b41f2fbe 419 SUPERFAMILY SSF56672 12 247 4.8E-55 T 12-10-2018 N288_17575 05c0ff9a4598afd3aed1a954b41f2fbe 419 Gene3D G3DSA:3.30.1490.100 258 365 1.5E-13 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 N288_17575 05c0ff9a4598afd3aed1a954b41f2fbe 419 Gene3D G3DSA:3.30.70.270 12 172 2.4E-31 T 12-10-2018 N288_17575 05c0ff9a4598afd3aed1a954b41f2fbe 419 Pfam PF11798 IMS family HHH motif 179 211 7.2E-9 T 12-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 N288_17575 05c0ff9a4598afd3aed1a954b41f2fbe 419 Gene3D G3DSA:1.10.150.20 191 243 3.4E-17 T 12-10-2018 N288_17575 05c0ff9a4598afd3aed1a954b41f2fbe 419 Pfam PF00817 impB/mucB/samB family 15 164 1.2E-29 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 N288_25835 718fb2688989dd927832275e1bb511d2 441 Pfam PF07435 YycH protein 4 438 1.3E-88 T 12-10-2018 IPR009996 Regulatory protein YycH N288_25835 718fb2688989dd927832275e1bb511d2 441 Gene3D G3DSA:3.10.450.310 208 402 2.5E-50 T 12-10-2018 N288_25835 718fb2688989dd927832275e1bb511d2 441 Gene3D G3DSA:3.30.310.160 225 365 2.5E-50 T 12-10-2018 N288_08745 144c3db2d3c17b20b84fd7e3fa3cbc86 555 PIRSF PIRSF004803 1 555 6.8E-247 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 N288_08745 144c3db2d3c17b20b84fd7e3fa3cbc86 555 Hamap MF_01491 Ribonuclease J [rnj]. 4 555 48.039 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 N288_08745 144c3db2d3c17b20b84fd7e3fa3cbc86 555 Gene3D G3DSA:3.40.50.10710 207 357 5.0E-191 T 12-10-2018 N288_08745 144c3db2d3c17b20b84fd7e3fa3cbc86 555 Gene3D G3DSA:3.10.20.580 449 555 5.9E-40 T 12-10-2018 N288_08745 144c3db2d3c17b20b84fd7e3fa3cbc86 555 SUPERFAMILY SSF56281 11 423 5.59E-95 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_08745 144c3db2d3c17b20b84fd7e3fa3cbc86 555 Gene3D G3DSA:3.60.15.10 12 442 5.0E-191 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_08745 144c3db2d3c17b20b84fd7e3fa3cbc86 555 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 10 553 4.3E-232 T 12-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 N288_08745 144c3db2d3c17b20b84fd7e3fa3cbc86 555 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 361 407 4.4E-8 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain N288_08745 144c3db2d3c17b20b84fd7e3fa3cbc86 555 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 364 392 - T 12-10-2018 IPR001587 Ribonuclease J, conserved site N288_08745 144c3db2d3c17b20b84fd7e3fa3cbc86 555 SMART SM00849 21 215 1.2E-26 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_08745 144c3db2d3c17b20b84fd7e3fa3cbc86 555 Pfam PF00753 Metallo-beta-lactamase superfamily 19 167 1.3E-15 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_15355 06fc360ab15842d572e0dbe2b23255ae 337 Gene3D G3DSA:2.40.100.10 232 337 6.2E-33 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily N288_15355 06fc360ab15842d572e0dbe2b23255ae 337 Pfam PF05913 Bacterial protein of unknown function (DUF871) 2 334 2.4E-101 T 12-10-2018 IPR008589 Protein of unknown function DUF871, prokaryotic N288_15355 06fc360ab15842d572e0dbe2b23255ae 337 SUPERFAMILY SSF51445 2 227 5.69E-61 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_15355 06fc360ab15842d572e0dbe2b23255ae 337 SUPERFAMILY SSF50891 237 335 6.45E-27 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily N288_15355 06fc360ab15842d572e0dbe2b23255ae 337 Gene3D G3DSA:3.20.20.70 1 231 5.8E-68 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_06045 254c90aa93cf0ecfbc4025944212fbf8 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 395 2.7E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06045 254c90aa93cf0ecfbc4025944212fbf8 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 361 2.7E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06045 254c90aa93cf0ecfbc4025944212fbf8 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 375 2.7E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06045 254c90aa93cf0ecfbc4025944212fbf8 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 414 2.7E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06045 254c90aa93cf0ecfbc4025944212fbf8 420 Gene3D G3DSA:3.30.565.10 267 414 9.5E-58 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_06045 254c90aa93cf0ecfbc4025944212fbf8 420 SMART SM00388 203 269 3.5E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_06045 254c90aa93cf0ecfbc4025944212fbf8 420 Gene3D G3DSA:1.10.287.130 207 266 9.5E-58 T 12-10-2018 N288_06045 254c90aa93cf0ecfbc4025944212fbf8 420 Pfam PF07694 5TMR of 5TMR-LYT 34 183 1.1E-7 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 N288_06045 254c90aa93cf0ecfbc4025944212fbf8 420 SMART SM00387 310 417 1.1E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_06045 254c90aa93cf0ecfbc4025944212fbf8 420 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 416 2.0E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_06045 254c90aa93cf0ecfbc4025944212fbf8 420 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 265 2.1E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_06045 254c90aa93cf0ecfbc4025944212fbf8 420 SUPERFAMILY SSF47384 198 266 1.82E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_06045 254c90aa93cf0ecfbc4025944212fbf8 420 SUPERFAMILY SSF55874 273 414 4.45E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 Gene3D G3DSA:3.50.30.20 1 150 1.6E-48 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 349 7.4E-129 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 131 5.1E-45 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 Pfam PF00117 Glutamine amidotransferase class-I 169 346 1.9E-44 T 12-10-2018 IPR017926 Glutamine amidotransferase N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 SMART SM01097 1 133 1.8E-63 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 SUPERFAMILY SSF52317 162 349 4.95E-52 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 PRINTS PR00097 Anthranilate synthase component II signature 210 219 3.2E-7 T 12-10-2018 N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 PRINTS PR00097 Anthranilate synthase component II signature 237 248 3.2E-7 T 12-10-2018 N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 PRINTS PR00097 Anthranilate synthase component II signature 323 336 3.2E-7 T 12-10-2018 N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 279 290 9.7E-31 T 12-10-2018 N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 168 182 9.7E-31 T 12-10-2018 N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 254 271 9.7E-31 T 12-10-2018 N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 207 221 9.7E-31 T 12-10-2018 N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 237 253 9.7E-31 T 12-10-2018 N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 PRINTS PR00096 Glutamine amidotransferase superfamily signature 210 219 5.2E-12 T 12-10-2018 N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 PRINTS PR00096 Glutamine amidotransferase superfamily signature 237 248 5.2E-12 T 12-10-2018 N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 PRINTS PR00096 Glutamine amidotransferase superfamily signature 323 336 5.2E-12 T 12-10-2018 N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 SUPERFAMILY SSF52021 1 138 8.5E-46 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 Gene3D G3DSA:3.40.50.880 160 354 5.2E-32 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_07495 3415716f7cb6f3e73ae32933acd86bbf 359 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 352 42.753 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_18945 3dbba4fa7efb88c69819305c3ecf5957 368 Pfam PF02445 Quinolinate synthetase A protein 29 366 4.8E-105 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 N288_18945 3dbba4fa7efb88c69819305c3ecf5957 368 Gene3D G3DSA:3.40.50.10800 230 317 2.0E-79 T 12-10-2018 N288_18945 3dbba4fa7efb88c69819305c3ecf5957 368 Hamap MF_00569 Quinolinate synthase A [nadA]. 22 367 54.886 T 12-10-2018 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 N288_18945 3dbba4fa7efb88c69819305c3ecf5957 368 Gene3D G3DSA:3.40.50.10800 30 348 2.0E-79 T 12-10-2018 N288_18945 3dbba4fa7efb88c69819305c3ecf5957 368 SUPERFAMILY SSF142754 31 366 7.59E-96 T 12-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 N288_18945 3dbba4fa7efb88c69819305c3ecf5957 368 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 21 366 1.4E-110 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 N288_18945 3dbba4fa7efb88c69819305c3ecf5957 368 Gene3D G3DSA:3.40.50.10800 112 365 2.0E-79 T 12-10-2018 N288_15625 4d3dd1cc8bf62ef14e8599e5eee84940 203 Pfam PF00117 Glutamine amidotransferase class-I 3 187 1.9E-55 T 12-10-2018 IPR017926 Glutamine amidotransferase N288_15625 4d3dd1cc8bf62ef14e8599e5eee84940 203 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 1.5E-13 T 12-10-2018 N288_15625 4d3dd1cc8bf62ef14e8599e5eee84940 203 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.5E-13 T 12-10-2018 N288_15625 4d3dd1cc8bf62ef14e8599e5eee84940 203 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.5E-13 T 12-10-2018 N288_15625 4d3dd1cc8bf62ef14e8599e5eee84940 203 SUPERFAMILY SSF52317 1 191 1.64E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_15625 4d3dd1cc8bf62ef14e8599e5eee84940 203 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 2.3E-8 T 12-10-2018 N288_15625 4d3dd1cc8bf62ef14e8599e5eee84940 203 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 2.3E-8 T 12-10-2018 N288_15625 4d3dd1cc8bf62ef14e8599e5eee84940 203 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.7E-34 T 12-10-2018 N288_15625 4d3dd1cc8bf62ef14e8599e5eee84940 203 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.7E-34 T 12-10-2018 N288_15625 4d3dd1cc8bf62ef14e8599e5eee84940 203 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.7E-34 T 12-10-2018 N288_15625 4d3dd1cc8bf62ef14e8599e5eee84940 203 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.7E-34 T 12-10-2018 N288_15625 4d3dd1cc8bf62ef14e8599e5eee84940 203 PRINTS PR00097 Anthranilate synthase component II signature 165 178 1.7E-34 T 12-10-2018 N288_15625 4d3dd1cc8bf62ef14e8599e5eee84940 203 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.7E-34 T 12-10-2018 N288_15625 4d3dd1cc8bf62ef14e8599e5eee84940 203 Gene3D G3DSA:3.40.50.880 1 190 7.5E-63 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_15625 4d3dd1cc8bf62ef14e8599e5eee84940 203 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 1.3E-71 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 N288_10140 3004d97e3e2d72bb5daf0d4a59d417f9 519 TIGRFAM TIGR00277 HDIG: HDIG domain 331 408 8.0E-26 T 12-10-2018 IPR006675 HDIG domain N288_10140 3004d97e3e2d72bb5daf0d4a59d417f9 519 Gene3D G3DSA:3.30.1370.10 207 308 5.8E-9 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 N288_10140 3004d97e3e2d72bb5daf0d4a59d417f9 519 Pfam PF00013 KH domain 212 269 2.4E-6 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 N288_10140 3004d97e3e2d72bb5daf0d4a59d417f9 519 SMART SM00471 331 437 2.3E-14 T 12-10-2018 IPR003607 HD/PDEase domain N288_10140 3004d97e3e2d72bb5daf0d4a59d417f9 519 Gene3D G3DSA:1.10.3210.10 318 471 2.7E-19 T 12-10-2018 N288_10140 3004d97e3e2d72bb5daf0d4a59d417f9 519 Pfam PF12072 Domain of unknown function (DUF3552) 5 204 7.8E-80 T 12-10-2018 IPR022711 Ribonuclease Y, N-terminal N288_10140 3004d97e3e2d72bb5daf0d4a59d417f9 519 Pfam PF01966 HD domain 336 427 4.5E-19 T 12-10-2018 IPR006674 HD domain N288_10140 3004d97e3e2d72bb5daf0d4a59d417f9 519 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 7 519 5.4E-250 T 12-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 N288_10140 3004d97e3e2d72bb5daf0d4a59d417f9 519 SUPERFAMILY SSF54791 207 303 1.66E-16 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 N288_10140 3004d97e3e2d72bb5daf0d4a59d417f9 519 Hamap MF_00335 Ribonuclease Y [rny]. 4 519 26.263 T 12-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 N288_10140 3004d97e3e2d72bb5daf0d4a59d417f9 519 SMART SM00322 207 274 1.2E-6 T 12-10-2018 IPR004087 K Homology domain GO:0003676 N288_10140 3004d97e3e2d72bb5daf0d4a59d417f9 519 SUPERFAMILY SSF109604 315 466 1.64E-30 T 12-10-2018 N288_23065 aaba7d6ad4b9d71678ecdd5feb2b8319 361 Pfam PF07470 Glycosyl Hydrolase Family 88 37 352 2.8E-88 T 12-10-2018 IPR010905 Glycosyl hydrolase, family 88 N288_23065 aaba7d6ad4b9d71678ecdd5feb2b8319 361 Gene3D G3DSA:1.50.10.10 1 355 1.0E-122 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 N288_23065 aaba7d6ad4b9d71678ecdd5feb2b8319 361 SUPERFAMILY SSF48208 11 353 2.04E-81 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 N288_03305 a8da58d78ba961aeafe527e259a29f61 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.3E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_03305 a8da58d78ba961aeafe527e259a29f61 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.3E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_03305 a8da58d78ba961aeafe527e259a29f61 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.3E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_03305 a8da58d78ba961aeafe527e259a29f61 210 Pfam PF00072 Response regulator receiver domain 4 115 5.4E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_03305 a8da58d78ba961aeafe527e259a29f61 210 SUPERFAMILY SSF52172 1 131 1.57E-32 T 12-10-2018 IPR011006 CheY-like superfamily N288_03305 a8da58d78ba961aeafe527e259a29f61 210 SMART SM00448 2 115 2.9E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_03305 a8da58d78ba961aeafe527e259a29f61 210 Gene3D G3DSA:3.40.50.12740 2 209 9.0E-75 T 12-10-2018 N288_03305 a8da58d78ba961aeafe527e259a29f61 210 SUPERFAMILY SSF46894 139 208 2.82E-23 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_03305 a8da58d78ba961aeafe527e259a29f61 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_03305 a8da58d78ba961aeafe527e259a29f61 210 SMART SM00421 146 203 3.5E-27 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_03305 a8da58d78ba961aeafe527e259a29f61 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 6.6E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_18045 a5115be8a7ff43b52660f963cfc21c46 343 Gene3D G3DSA:1.20.81.30 2 113 1.2E-11 T 12-10-2018 N288_18045 a5115be8a7ff43b52660f963cfc21c46 343 Gene3D G3DSA:1.20.81.30 197 308 1.1E-12 T 12-10-2018 N288_18045 a5115be8a7ff43b52660f963cfc21c46 343 Pfam PF00482 Type II secretion system (T2SS), protein F 213 335 3.0E-16 T 12-10-2018 IPR018076 Type II secretion system F domain N288_18045 a5115be8a7ff43b52660f963cfc21c46 343 Pfam PF00482 Type II secretion system (T2SS), protein F 14 128 6.8E-10 T 12-10-2018 IPR018076 Type II secretion system F domain N288_00435 479dba8b4cc34303f47d1f36db16993a 662 SUPERFAMILY SSF52540 153 402 3.4E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00435 479dba8b4cc34303f47d1f36db16993a 662 ProSitePatterns PS00674 AAA-protein family signature. 301 319 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 N288_00435 479dba8b4cc34303f47d1f36db16993a 662 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 110 601 7.4E-249 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 N288_00435 479dba8b4cc34303f47d1f36db16993a 662 Gene3D G3DSA:1.10.8.60 332 409 1.4E-30 T 12-10-2018 N288_00435 479dba8b4cc34303f47d1f36db16993a 662 Pfam PF01434 Peptidase family M41 392 600 4.4E-88 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 N288_00435 479dba8b4cc34303f47d1f36db16993a 662 Gene3D G3DSA:3.40.50.300 148 331 1.2E-71 T 12-10-2018 N288_00435 479dba8b4cc34303f47d1f36db16993a 662 SUPERFAMILY SSF140990 412 607 4.71E-75 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 N288_00435 479dba8b4cc34303f47d1f36db16993a 662 SMART SM00382 194 333 6.7E-26 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_00435 479dba8b4cc34303f47d1f36db16993a 662 Pfam PF06480 FtsH Extracellular 9 103 3.2E-9 T 12-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 N288_00435 479dba8b4cc34303f47d1f36db16993a 662 Gene3D G3DSA:1.20.58.760 412 615 1.2E-76 T 12-10-2018 N288_00435 479dba8b4cc34303f47d1f36db16993a 662 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 198 330 1.1E-45 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 N288_00435 479dba8b4cc34303f47d1f36db16993a 662 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 609 38.932 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 N288_08235 803ff6ebe8eecf27801ce8e78dd41a28 560 Pfam PF00128 Alpha amylase, catalytic domain 28 377 5.0E-132 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_08235 803ff6ebe8eecf27801ce8e78dd41a28 560 SMART SM00642 13 419 1.3E-169 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_08235 803ff6ebe8eecf27801ce8e78dd41a28 560 Gene3D G3DSA:3.90.400.10 105 174 1.4E-210 T 12-10-2018 N288_08235 803ff6ebe8eecf27801ce8e78dd41a28 560 SUPERFAMILY SSF51011 480 556 1.44E-14 T 12-10-2018 N288_08235 803ff6ebe8eecf27801ce8e78dd41a28 560 Gene3D G3DSA:3.20.20.80 4 472 1.4E-210 T 12-10-2018 N288_08235 803ff6ebe8eecf27801ce8e78dd41a28 560 SUPERFAMILY SSF51445 3 477 1.98E-160 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_08235 803ff6ebe8eecf27801ce8e78dd41a28 560 Gene3D G3DSA:2.60.40.1180 481 558 1.4E-18 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_22300 513d6e22586e055de2301718712ed907 2186 Gene3D G3DSA:3.60.21.10 1397 1617 1.0E-16 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_22300 513d6e22586e055de2301718712ed907 2186 Pfam PF00149 Calcineurin-like phosphoesterase 1400 1593 1.4E-10 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 N288_22300 513d6e22586e055de2301718712ed907 2186 Pfam PF00932 Lamin Tail Domain 320 452 3.8E-13 T 12-10-2018 IPR001322 Lamin tail domain N288_22300 513d6e22586e055de2301718712ed907 2186 Pfam PF00932 Lamin Tail Domain 39 163 3.5E-8 T 12-10-2018 IPR001322 Lamin tail domain N288_22300 513d6e22586e055de2301718712ed907 2186 Pfam PF00932 Lamin Tail Domain 613 742 2.1E-10 T 12-10-2018 IPR001322 Lamin tail domain N288_22300 513d6e22586e055de2301718712ed907 2186 Pfam PF00395 S-layer homology domain 2051 2096 6.2E-14 T 12-10-2018 IPR001119 S-layer homology domain N288_22300 513d6e22586e055de2301718712ed907 2186 Pfam PF00395 S-layer homology domain 2124 2167 4.6E-9 T 12-10-2018 IPR001119 S-layer homology domain N288_22300 513d6e22586e055de2301718712ed907 2186 Pfam PF00395 S-layer homology domain 1991 2033 3.3E-10 T 12-10-2018 IPR001119 S-layer homology domain N288_22300 513d6e22586e055de2301718712ed907 2186 SUPERFAMILY SSF56300 1396 1599 1.0E-32 T 12-10-2018 N288_22300 513d6e22586e055de2301718712ed907 2186 SUPERFAMILY SSF74853 596 705 7.19E-5 T 12-10-2018 IPR036415 Lamin tail domain superfamily N288_22300 513d6e22586e055de2301718712ed907 2186 SUPERFAMILY SSF74853 319 400 3.66E-9 T 12-10-2018 IPR036415 Lamin tail domain superfamily N288_22300 513d6e22586e055de2301718712ed907 2186 SUPERFAMILY SSF74853 38 113 4.97E-5 T 12-10-2018 IPR036415 Lamin tail domain superfamily N288_09985 249ba6556db12a8ad42fb8d472ca0305 317 SUPERFAMILY SSF88713 112 308 7.56E-57 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 N288_09985 249ba6556db12a8ad42fb8d472ca0305 317 Pfam PF01522 Polysaccharide deacetylase 126 241 5.2E-30 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 N288_09985 249ba6556db12a8ad42fb8d472ca0305 317 Gene3D G3DSA:3.20.20.370 116 317 1.7E-56 T 12-10-2018 N288_09985 249ba6556db12a8ad42fb8d472ca0305 317 TIGRFAM TIGR02873 spore_ylxY: probable sporulation protein, polysaccharide deacetylase family 42 309 3.5E-126 T 12-10-2018 IPR014228 Sporulation protein, polysaccharide deacetylase, YlxY N288_25095 f80f7bcb47f030ae4279f20a6ad6b53f 400 Gene3D G3DSA:1.20.1250.20 14 201 7.9E-13 T 12-10-2018 N288_25095 f80f7bcb47f030ae4279f20a6ad6b53f 400 Pfam PF07690 Major Facilitator Superfamily 31 360 1.3E-25 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_25095 f80f7bcb47f030ae4279f20a6ad6b53f 400 SUPERFAMILY SSF103473 8 396 4.84E-45 T 12-10-2018 IPR036259 MFS transporter superfamily N288_25095 f80f7bcb47f030ae4279f20a6ad6b53f 400 Gene3D G3DSA:1.20.1250.20 208 397 5.6E-22 T 12-10-2018 N288_05910 6a1452152f942d5458a30445b9b636a4 599 Pfam PF06580 Histidine kinase 382 460 1.6E-21 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 N288_05910 6a1452152f942d5458a30445b9b636a4 599 Pfam PF00672 HAMP domain 318 366 3.4E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_05910 6a1452152f942d5458a30445b9b636a4 599 Pfam PF02743 Cache domain 38 278 1.5E-14 T 12-10-2018 IPR033479 Double Cache domain 1 N288_05910 6a1452152f942d5458a30445b9b636a4 599 SUPERFAMILY SSF158472 318 368 1.83E-8 T 12-10-2018 N288_05910 6a1452152f942d5458a30445b9b636a4 599 Gene3D G3DSA:1.20.1480.50 284 374 3.5E-10 T 12-10-2018 N288_05910 6a1452152f942d5458a30445b9b636a4 599 Gene3D G3DSA:3.30.565.10 454 588 1.1E-12 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_05910 6a1452152f942d5458a30445b9b636a4 599 SUPERFAMILY SSF55874 436 586 2.84E-11 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_05910 6a1452152f942d5458a30445b9b636a4 599 SMART SM00304 317 369 7.1E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_08070 76e73a4280be0cbb8aabde55e43d5d19 306 TIGRFAM TIGR02069 cyanophycinase: cyanophycinase 41 289 5.8E-71 T 12-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 N288_08070 76e73a4280be0cbb8aabde55e43d5d19 306 SUPERFAMILY SSF52317 41 262 2.02E-27 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_08070 76e73a4280be0cbb8aabde55e43d5d19 306 PIRSF PIRSF032067 20 302 1.2E-66 T 12-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 N288_08070 76e73a4280be0cbb8aabde55e43d5d19 306 Pfam PF03575 Peptidase family S51 41 245 2.8E-26 T 12-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 N288_08070 76e73a4280be0cbb8aabde55e43d5d19 306 Gene3D G3DSA:3.40.50.880 37 300 9.0E-73 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_23620 c309df65a0dc7ce58478350634b2436f 249 Gene3D G3DSA:3.30.2030.10 33 173 1.8E-39 T 12-10-2018 N288_23620 c309df65a0dc7ce58478350634b2436f 249 Pfam PF08680 TATA-box binding 49 249 2.8E-61 T 12-10-2018 IPR014794 TATA-box binding N288_23620 c309df65a0dc7ce58478350634b2436f 249 SUPERFAMILY SSF143842 34 247 2.75E-59 T 12-10-2018 IPR036209 YwmB-like superfamily N288_23620 c309df65a0dc7ce58478350634b2436f 249 Gene3D G3DSA:3.30.360.40 175 249 2.0E-29 T 12-10-2018 N288_15055 683d536909633d4ae09efed48e269702 177 Pfam PF04542 Sigma-70 region 2 12 80 4.7E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_15055 683d536909633d4ae09efed48e269702 177 SUPERFAMILY SSF88946 7 90 6.8E-21 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_15055 683d536909633d4ae09efed48e269702 177 Gene3D G3DSA:1.10.10.10 96 165 1.5E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_15055 683d536909633d4ae09efed48e269702 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 164 5.8E-28 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_15055 683d536909633d4ae09efed48e269702 177 SUPERFAMILY SSF88659 99 163 8.78E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_15055 683d536909633d4ae09efed48e269702 177 Pfam PF08281 Sigma-70, region 4 110 160 8.1E-14 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_15055 683d536909633d4ae09efed48e269702 177 Gene3D G3DSA:1.10.1740.10 1 75 3.3E-21 T 12-10-2018 N288_17320 df242aaeb98d2961fe41b40df8be2057 246 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 N288_17320 df242aaeb98d2961fe41b40df8be2057 246 SUPERFAMILY SSF55174 2 67 2.94E-17 T 12-10-2018 N288_17320 df242aaeb98d2961fe41b40df8be2057 246 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 226 3.0E-54 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 N288_17320 df242aaeb98d2961fe41b40df8be2057 246 Gene3D G3DSA:3.30.70.1560 128 215 1.0E-28 T 12-10-2018 N288_17320 df242aaeb98d2961fe41b40df8be2057 246 Pfam PF00849 RNA pseudouridylate synthase 62 196 2.7E-26 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_17320 df242aaeb98d2961fe41b40df8be2057 246 Gene3D G3DSA:3.30.70.580 56 127 6.9E-29 T 12-10-2018 N288_17320 df242aaeb98d2961fe41b40df8be2057 246 Gene3D G3DSA:3.10.290.10 1 55 4.5E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 N288_17320 df242aaeb98d2961fe41b40df8be2057 246 SMART SM00363 2 63 7.2E-17 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_17320 df242aaeb98d2961fe41b40df8be2057 246 SUPERFAMILY SSF55120 46 238 5.52E-50 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_17320 df242aaeb98d2961fe41b40df8be2057 246 Pfam PF01479 S4 domain 2 48 2.1E-16 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_08180 e048377fcbb41cb8c86114e19cbaf1f2 291 Gene3D G3DSA:1.10.3720.10 12 281 2.3E-71 T 12-10-2018 IPR035906 MetI-like superfamily N288_08180 e048377fcbb41cb8c86114e19cbaf1f2 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 279 2.1E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_08180 e048377fcbb41cb8c86114e19cbaf1f2 291 SUPERFAMILY SSF161098 19 282 1.09E-74 T 12-10-2018 IPR035906 MetI-like superfamily N288_09390 688923a7efdf006e60fb4ab7a8daae00 204 SMART SM00072 4 187 1.5E-75 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit N288_09390 688923a7efdf006e60fb4ab7a8daae00 204 Gene3D G3DSA:3.30.63.10 37 96 6.8E-66 T 12-10-2018 N288_09390 688923a7efdf006e60fb4ab7a8daae00 204 Hamap MF_00328 Guanylate kinase [gmk]. 3 187 36.448 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 N288_09390 688923a7efdf006e60fb4ab7a8daae00 204 SUPERFAMILY SSF52540 3 191 2.29E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_09390 688923a7efdf006e60fb4ab7a8daae00 204 Gene3D G3DSA:3.40.50.300 4 189 6.8E-66 T 12-10-2018 N288_09390 688923a7efdf006e60fb4ab7a8daae00 204 Pfam PF00625 Guanylate kinase 7 185 8.5E-52 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit N288_09390 688923a7efdf006e60fb4ab7a8daae00 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 184 7.1E-72 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 3 303 2.0E-119 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 SUPERFAMILY SSF51905 3 304 3.96E-61 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 132 152 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 292 3.1E-53 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 125 137 2.7E-73 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 284 2.7E-73 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 103 111 2.7E-73 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 231 252 2.7E-73 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 2.7E-73 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 36 51 2.7E-73 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 57 67 2.7E-73 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 192 208 2.7E-73 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 140 164 2.7E-73 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 Gene3D G3DSA:3.50.50.60 119 242 8.0E-122 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 4.9E-37 T 12-10-2018 N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 4.9E-37 T 12-10-2018 N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 229 245 4.9E-37 T 12-10-2018 N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 4.9E-37 T 12-10-2018 N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 4.9E-37 T 12-10-2018 N288_06315 c685d290e487cddaa0f4dec7c15301b6 319 Gene3D G3DSA:3.50.50.60 4 302 8.0E-122 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_22960 0a08523b1abe6692f8fe4cd457cb56d3 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 291 2.1E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_22960 0a08523b1abe6692f8fe4cd457cb56d3 299 SUPERFAMILY SSF161098 27 299 9.35E-76 T 12-10-2018 IPR035906 MetI-like superfamily N288_22960 0a08523b1abe6692f8fe4cd457cb56d3 299 Gene3D G3DSA:1.10.3720.10 16 290 5.8E-67 T 12-10-2018 IPR035906 MetI-like superfamily N288_02050 45b95054c7385bbb99434329452290f6 327 SUPERFAMILY SSF51412 3 315 5.36E-91 T 12-10-2018 N288_02050 45b95054c7385bbb99434329452290f6 327 SMART SM01240 3 327 2.2E-115 T 12-10-2018 N288_02050 45b95054c7385bbb99434329452290f6 327 TIGRFAM TIGR01306 GMP_reduct_2: guanosine monophosphate reductase 4 324 4.2E-196 T 12-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 N288_02050 45b95054c7385bbb99434329452290f6 327 Hamap MF_01511 GMP reductase [guaC]. 2 325 64.034 T 12-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 N288_02050 45b95054c7385bbb99434329452290f6 327 Gene3D G3DSA:3.20.20.70 1 327 1.3E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_02050 45b95054c7385bbb99434329452290f6 327 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 6 311 4.7E-69 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 N288_02050 45b95054c7385bbb99434329452290f6 327 PIRSF PIRSF036500 1 326 7.8E-193 T 12-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 N288_02050 45b95054c7385bbb99434329452290f6 327 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 165 177 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 N288_21500 f97e7c4a862289f78f70d2517e3ef7ee 153 Pfam PF01047 MarR family 36 94 3.1E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_21500 f97e7c4a862289f78f70d2517e3ef7ee 153 SUPERFAMILY SSF46785 35 146 1.68E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_21500 f97e7c4a862289f78f70d2517e3ef7ee 153 SMART SM00347 29 129 1.1E-25 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_21500 f97e7c4a862289f78f70d2517e3ef7ee 153 Gene3D G3DSA:1.10.10.10 3 146 1.6E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_21500 f97e7c4a862289f78f70d2517e3ef7ee 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 1.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_21500 f97e7c4a862289f78f70d2517e3ef7ee 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 1.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_21500 f97e7c4a862289f78f70d2517e3ef7ee 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 1.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_21500 f97e7c4a862289f78f70d2517e3ef7ee 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 1.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_12665 52abede748b3a62948aa8655cfec0cb3 318 SUPERFAMILY SSF161111 9 229 5.36E-31 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily N288_12665 52abede748b3a62948aa8655cfec0cb3 318 SUPERFAMILY SSF160240 231 303 6.41E-12 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 N288_12665 52abede748b3a62948aa8655cfec0cb3 318 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 301 3.1E-37 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 N288_12665 52abede748b3a62948aa8655cfec0cb3 318 Gene3D G3DSA:3.30.70.1350 230 302 2.1E-6 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 N288_12665 52abede748b3a62948aa8655cfec0cb3 318 Pfam PF01545 Cation efflux family 16 227 1.6E-25 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 N288_12665 52abede748b3a62948aa8655cfec0cb3 318 Gene3D G3DSA:1.20.1510.10 11 228 5.0E-27 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily N288_12665 52abede748b3a62948aa8655cfec0cb3 318 Pfam PF16916 Dimerisation domain of Zinc Transporter 233 302 2.0E-8 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain N288_09815 3107a40bfda5876f83758909704acd39 674 SMART SM00260 534 673 9.3E-37 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 N288_09815 3107a40bfda5876f83758909704acd39 674 Pfam PF01584 CheW-like domain 547 673 1.7E-24 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 N288_09815 3107a40bfda5876f83758909704acd39 674 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 541 4.5E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_09815 3107a40bfda5876f83758909704acd39 674 Pfam PF07194 P2 response regulator binding domain 173 252 1.3E-25 T 12-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 N288_09815 3107a40bfda5876f83758909704acd39 674 SMART SM01231 294 354 1.0E-18 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 N288_09815 3107a40bfda5876f83758909704acd39 674 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 294 353 7.2E-14 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 N288_09815 3107a40bfda5876f83758909704acd39 674 Pfam PF01627 Hpt domain 5 97 9.4E-21 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 N288_09815 3107a40bfda5876f83758909704acd39 674 SMART SM00387 399 542 7.8E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_09815 3107a40bfda5876f83758909704acd39 674 Gene3D G3DSA:1.20.120.160 2 137 6.4E-40 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 N288_09815 3107a40bfda5876f83758909704acd39 674 SMART SM00073 3 100 2.6E-37 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 N288_09815 3107a40bfda5876f83758909704acd39 674 SUPERFAMILY SSF47384 295 355 6.28E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_09815 3107a40bfda5876f83758909704acd39 674 Gene3D G3DSA:3.30.565.10 355 541 9.8E-62 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_09815 3107a40bfda5876f83758909704acd39 674 Gene3D G3DSA:1.10.287.560 294 354 3.6E-20 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 N288_09815 3107a40bfda5876f83758909704acd39 674 SUPERFAMILY SSF50341 541 673 3.27E-32 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 N288_09815 3107a40bfda5876f83758909704acd39 674 SUPERFAMILY SSF55052 170 253 2.88E-23 T 12-10-2018 IPR035891 CheY-binding domain of CheA N288_09815 3107a40bfda5876f83758909704acd39 674 Gene3D G3DSA:3.30.70.1110 170 254 1.8E-30 T 12-10-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily N288_09815 3107a40bfda5876f83758909704acd39 674 SUPERFAMILY SSF47226 3 113 5.63E-32 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 N288_09815 3107a40bfda5876f83758909704acd39 674 SUPERFAMILY SSF55874 356 540 5.76E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_09815 3107a40bfda5876f83758909704acd39 674 Gene3D G3DSA:2.30.30.40 542 668 1.3E-38 T 12-10-2018 N288_09815 3107a40bfda5876f83758909704acd39 674 Gene3D G3DSA:2.40.50.180 565 628 1.3E-38 T 12-10-2018 N288_09815 3107a40bfda5876f83758909704acd39 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 458 3.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_09815 3107a40bfda5876f83758909704acd39 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 526 539 3.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_09815 3107a40bfda5876f83758909704acd39 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 520 3.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_24570 432d6ffc1b0190d6fe66b061ecb5492f 74 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 68 1.5E-24 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_24570 432d6ffc1b0190d6fe66b061ecb5492f 74 Gene3D G3DSA:1.10.260.40 1 71 8.0E-11 T 12-10-2018 N288_24570 432d6ffc1b0190d6fe66b061ecb5492f 74 SUPERFAMILY SSF47413 1 69 1.58E-19 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_24570 432d6ffc1b0190d6fe66b061ecb5492f 74 SMART SM00530 6 62 1.1E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_03345 cd714d99b4c92607334d5a35da9f6e98 82 Pfam PF11007 Spore coat associated protein JA (CotJA) 35 70 3.8E-11 T 12-10-2018 IPR020256 Spore coat protein CotJA N288_03345 cd714d99b4c92607334d5a35da9f6e98 82 ProDom PD059966 COTJA SPORE PROTEIN-RELATED COAT-ASSOCIATED COTJAA JA 12 77 4.0E-21 T 12-10-2018 IPR020256 Spore coat protein CotJA N288_05160 5359817db6477603504de52435f0cb5e 241 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 72 1.7E-15 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 N288_05160 5359817db6477603504de52435f0cb5e 241 Gene3D G3DSA:1.10.10.10 3 72 4.0E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_05160 5359817db6477603504de52435f0cb5e 241 SUPERFAMILY SSF53697 78 229 3.4E-33 T 12-10-2018 N288_05160 5359817db6477603504de52435f0cb5e 241 Pfam PF01380 SIS domain 109 223 4.7E-16 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 N288_05160 5359817db6477603504de52435f0cb5e 241 Gene3D G3DSA:3.40.50.10490 78 238 2.2E-33 T 12-10-2018 N288_05160 5359817db6477603504de52435f0cb5e 241 SUPERFAMILY SSF46689 4 73 6.81E-20 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_13075 68c536eb35ebe97540e078f7adbfc6d6 296 PIRSF PIRSF000513 30 292 3.9E-91 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 N288_13075 68c536eb35ebe97540e078f7adbfc6d6 296 Gene3D G3DSA:3.40.1190.20 19 293 2.0E-91 T 12-10-2018 IPR029056 Ribokinase-like N288_13075 68c536eb35ebe97540e078f7adbfc6d6 296 SUPERFAMILY SSF53613 35 289 5.45E-57 T 12-10-2018 IPR029056 Ribokinase-like N288_13075 68c536eb35ebe97540e078f7adbfc6d6 296 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 43 50 8.4E-42 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 N288_13075 68c536eb35ebe97540e078f7adbfc6d6 296 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 187 204 8.4E-42 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 N288_13075 68c536eb35ebe97540e078f7adbfc6d6 296 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 56 77 8.4E-42 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 N288_13075 68c536eb35ebe97540e078f7adbfc6d6 296 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 113 130 8.4E-42 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 N288_13075 68c536eb35ebe97540e078f7adbfc6d6 296 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 144 158 8.4E-42 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 N288_13075 68c536eb35ebe97540e078f7adbfc6d6 296 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 87 95 8.4E-42 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 N288_13075 68c536eb35ebe97540e078f7adbfc6d6 296 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 37 284 32.564 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 N288_13075 68c536eb35ebe97540e078f7adbfc6d6 296 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 35 281 3.2E-87 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 N288_13075 68c536eb35ebe97540e078f7adbfc6d6 296 Pfam PF02110 Hydroxyethylthiazole kinase family 35 279 1.4E-83 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 SUPERFAMILY SSF82693 549 636 1.26E-12 T 12-10-2018 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 SUPERFAMILY SSF82693 40 132 4.36E-21 T 12-10-2018 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 Gene3D G3DSA:3.30.70.1320 130 324 0.0 T 12-10-2018 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 SUPERFAMILY SSF82714 706 791 2.35E-12 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains N288_08280 1ade896a248f391f33de783c20d8fc55 1090 Gene3D G3DSA:3.30.2090.10 174 266 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains N288_08280 1ade896a248f391f33de783c20d8fc55 1090 Gene3D G3DSA:3.30.2090.10 704 793 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains N288_08280 1ade896a248f391f33de783c20d8fc55 1090 SUPERFAMILY SSF82714 179 261 2.88E-12 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains N288_08280 1ade896a248f391f33de783c20d8fc55 1090 Pfam PF00873 AcrB/AcrD/AcrF family 3 1011 3.1E-253 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 Gene3D G3DSA:3.30.70.1430 550 655 0.0 T 12-10-2018 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 Gene3D G3DSA:1.20.1640.10 499 1008 0.0 T 12-10-2018 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 Gene3D G3DSA:3.30.70.1440 656 851 0.0 T 12-10-2018 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 SUPERFAMILY SSF82866 289 488 8.76E-49 T 12-10-2018 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 Gene3D G3DSA:3.30.70.1430 40 801 0.0 T 12-10-2018 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 2.7E-57 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 2.7E-57 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 2.7E-57 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 2.7E-57 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 2.7E-57 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 PRINTS PR00702 Acriflavin resistance protein family signature 535 552 2.7E-57 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.7E-57 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.7E-57 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 PRINTS PR00702 Acriflavin resistance protein family signature 607 621 2.7E-57 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 SUPERFAMILY SSF82693 134 321 8.37E-11 T 12-10-2018 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 SUPERFAMILY SSF82866 789 1013 6.8E-53 T 12-10-2018 N288_08280 1ade896a248f391f33de783c20d8fc55 1090 Gene3D G3DSA:1.20.1640.10 10 498 0.0 T 12-10-2018 N288_19800 7ac2fde25fe99ca1e4feb14559778662 534 Gene3D G3DSA:3.20.20.140 61 488 4.7E-134 T 12-10-2018 N288_19800 7ac2fde25fe99ca1e4feb14559778662 534 SUPERFAMILY SSF51556 60 481 7.74E-34 T 12-10-2018 IPR032466 Metal-dependent hydrolase N288_19800 7ac2fde25fe99ca1e4feb14559778662 534 Pfam PF07969 Amidohydrolase family 51 529 1.5E-120 T 12-10-2018 IPR013108 Amidohydrolase 3 N288_19800 7ac2fde25fe99ca1e4feb14559778662 534 Gene3D G3DSA:2.30.40.10 8 505 4.7E-134 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_19800 7ac2fde25fe99ca1e4feb14559778662 534 SUPERFAMILY SSF51338 2 532 1.67E-15 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_19800 7ac2fde25fe99ca1e4feb14559778662 534 Gene3D G3DSA:3.10.310.70 79 192 4.7E-134 T 12-10-2018 N288_10765 0cc64d6852741924eb2d2bc2729364d6 254 SUPERFAMILY SSF102705 3 245 2.49E-48 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily N288_10765 0cc64d6852741924eb2d2bc2729364d6 254 Gene3D G3DSA:3.40.1390.30 22 234 1.8E-38 T 12-10-2018 N288_10765 0cc64d6852741924eb2d2bc2729364d6 254 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 9 235 1.5E-35 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 N288_10765 0cc64d6852741924eb2d2bc2729364d6 254 Gene3D G3DSA:3.40.1390.30 93 219 1.8E-38 T 12-10-2018 N288_16905 8995bcb19612e7ba4429c23fa6baf61a 327 SUPERFAMILY SSF46785 4 62 4.21E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_16905 8995bcb19612e7ba4429c23fa6baf61a 327 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 326 37.554 T 12-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 N288_16905 8995bcb19612e7ba4429c23fa6baf61a 327 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 85 325 6.1E-71 T 12-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 N288_16905 8995bcb19612e7ba4429c23fa6baf61a 327 Gene3D G3DSA:3.30.930.10 69 278 5.9E-66 T 12-10-2018 N288_16905 8995bcb19612e7ba4429c23fa6baf61a 327 Pfam PF03099 Biotin/lipoate A/B protein ligase family 90 214 2.0E-17 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 N288_16905 8995bcb19612e7ba4429c23fa6baf61a 327 Gene3D G3DSA:1.10.10.10 2 64 1.1E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_16905 8995bcb19612e7ba4429c23fa6baf61a 327 SUPERFAMILY SSF55681 72 277 3.48E-60 T 12-10-2018 N288_16905 8995bcb19612e7ba4429c23fa6baf61a 327 Pfam PF08279 HTH domain 7 60 3.8E-14 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 N288_16905 8995bcb19612e7ba4429c23fa6baf61a 327 Gene3D G3DSA:2.30.30.100 280 325 7.1E-10 T 12-10-2018 N288_16905 8995bcb19612e7ba4429c23fa6baf61a 327 SUPERFAMILY SSF50037 282 325 8.24E-5 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal N288_16905 8995bcb19612e7ba4429c23fa6baf61a 327 Pfam PF02237 Biotin protein ligase C terminal domain 280 325 3.6E-8 T 12-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 N288_04110 2d0916ad7a5b33492c46cc569dc55c6a 438 SUPERFAMILY SSF48024 24 120 1.57E-20 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 N288_04110 2d0916ad7a5b33492c46cc569dc55c6a 438 Gene3D G3DSA:1.10.860.10 18 153 3.3E-32 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal N288_04110 2d0916ad7a5b33492c46cc569dc55c6a 438 SMART SM00382 198 385 0.0057 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_04110 2d0916ad7a5b33492c46cc569dc55c6a 438 SUPERFAMILY SSF52540 180 431 9.11E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_04110 2d0916ad7a5b33492c46cc569dc55c6a 438 Pfam PF03796 DnaB-like helicase C terminal domain 181 436 3.2E-84 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 N288_04110 2d0916ad7a5b33492c46cc569dc55c6a 438 Gene3D G3DSA:3.40.50.300 160 438 2.1E-95 T 12-10-2018 N288_04110 2d0916ad7a5b33492c46cc569dc55c6a 438 Pfam PF00772 DnaB-like helicase N terminal domain 23 115 1.5E-23 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 N288_01935 fe4343048d6857379c200e8e1f060146 207 Pfam PF07875 Coat F domain 125 186 1.0E-14 T 12-10-2018 IPR012851 Spore coat protein CotF-like N288_01935 fe4343048d6857379c200e8e1f060146 207 Gene3D G3DSA:1.20.1260.10 45 183 2.4E-5 T 12-10-2018 IPR012347 Ferritin-like N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 Gene3D G3DSA:3.30.2090.10 178 250 7.4E-58 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 Gene3D G3DSA:1.20.1640.10 364 544 3.7E-212 T 12-10-2018 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 SUPERFAMILY SSF82693 41 132 3.66E-21 T 12-10-2018 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 SUPERFAMILY SSF82866 330 532 3.4E-43 T 12-10-2018 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 Gene3D G3DSA:3.30.70.1320 312 363 3.7E-212 T 12-10-2018 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 Gene3D G3DSA:3.30.2090.10 742 830 3.7E-212 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 Gene3D G3DSA:1.20.1640.10 12 40 7.4E-58 T 12-10-2018 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 Gene3D G3DSA:3.30.70.1320 133 177 7.4E-58 T 12-10-2018 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 SUPERFAMILY SSF82866 827 1049 1.44E-43 T 12-10-2018 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 Pfam PF00873 AcrB/AcrD/AcrF family 294 1043 1.5E-166 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 Pfam PF00873 AcrB/AcrD/AcrF family 4 245 1.0E-43 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 SUPERFAMILY SSF82714 183 245 2.62E-5 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 Gene3D G3DSA:3.30.70.1440 693 888 3.7E-212 T 12-10-2018 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.6E-50 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 2.6E-50 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 PRINTS PR00702 Acriflavin resistance protein family signature 582 599 2.6E-50 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.6E-50 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 PRINTS PR00702 Acriflavin resistance protein family signature 396 417 2.6E-50 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 PRINTS PR00702 Acriflavin resistance protein family signature 424 448 2.6E-50 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 PRINTS PR00702 Acriflavin resistance protein family signature 505 528 2.6E-50 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 PRINTS PR00702 Acriflavin resistance protein family signature 651 665 2.6E-50 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 PRINTS PR00702 Acriflavin resistance protein family signature 369 392 2.6E-50 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 Gene3D G3DSA:3.30.70.1430 599 692 3.7E-212 T 12-10-2018 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 Gene3D G3DSA:1.20.1640.10 545 1042 3.7E-212 T 12-10-2018 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 Gene3D G3DSA:3.30.70.1430 41 132 7.4E-58 T 12-10-2018 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 Gene3D G3DSA:3.30.2090.10 294 311 3.7E-212 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 SUPERFAMILY SSF82693 134 362 6.8E-17 T 12-10-2018 N288_06340 8683bb2e1991cfd5826189dd5e728723 1060 SUPERFAMILY SSF82714 742 826 3.79E-10 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains N288_02135 6ab599e572607dc23ba5612172741137 329 Gene3D G3DSA:3.40.50.720 3 264 5.8E-131 T 12-10-2018 N288_02135 6ab599e572607dc23ba5612172741137 329 SUPERFAMILY SSF51735 1 327 4.15E-100 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_02135 6ab599e572607dc23ba5612172741137 329 Gene3D G3DSA:3.90.25.10 185 320 5.8E-131 T 12-10-2018 N288_02135 6ab599e572607dc23ba5612172741137 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 252 5.1E-60 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 N288_02135 6ab599e572607dc23ba5612172741137 329 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 326 7.9E-136 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 N288_21665 df93cbdb9c906164b9a5abe9fb998a72 120 Gene3D G3DSA:3.90.79.10 1 120 3.6E-27 T 12-10-2018 N288_21665 df93cbdb9c906164b9a5abe9fb998a72 120 SUPERFAMILY SSF55811 1 102 9.88E-17 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_21665 df93cbdb9c906164b9a5abe9fb998a72 120 Pfam PF00293 NUDIX domain 1 91 1.5E-10 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_23040 ed009c8b126cf754d4b32ed0187efc25 239 Gene3D G3DSA:3.40.50.1360 1 239 7.5E-75 T 12-10-2018 N288_23040 ed009c8b126cf754d4b32ed0187efc25 239 SUPERFAMILY SSF100950 1 237 5.02E-71 T 12-10-2018 IPR037171 NagB/RpiA transferase-like N288_23040 ed009c8b126cf754d4b32ed0187efc25 239 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 227 2.2E-18 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 N288_23040 ed009c8b126cf754d4b32ed0187efc25 239 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 120 138 - T 12-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 N288_24630 4122a2ecc6bbe8e51a12c55a8d44ad94 549 SUPERFAMILY SSF56634 16 505 7.98E-194 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_24630 4122a2ecc6bbe8e51a12c55a8d44ad94 549 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 352 360 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_24630 4122a2ecc6bbe8e51a12c55a8d44ad94 549 SMART SM01060 21 414 2.0E-248 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_24630 4122a2ecc6bbe8e51a12c55a8d44ad94 549 PIRSF PIRSF038928 7 505 2.0E-178 T 12-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_24630 4122a2ecc6bbe8e51a12c55a8d44ad94 549 Pfam PF06628 Catalase-related immune-responsive 437 498 2.8E-20 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_24630 4122a2ecc6bbe8e51a12c55a8d44ad94 549 Pfam PF00199 Catalase 21 410 6.6E-171 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_24630 4122a2ecc6bbe8e51a12c55a8d44ad94 549 ProSitePatterns PS00438 Catalase proximal active site signature. 57 73 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_24630 4122a2ecc6bbe8e51a12c55a8d44ad94 549 Gene3D G3DSA:2.40.180.10 17 524 7.6E-215 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 N288_24630 4122a2ecc6bbe8e51a12c55a8d44ad94 549 PRINTS PR00067 Catalase signature 142 160 1.1E-64 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_24630 4122a2ecc6bbe8e51a12c55a8d44ad94 549 PRINTS PR00067 Catalase signature 102 120 1.1E-64 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_24630 4122a2ecc6bbe8e51a12c55a8d44ad94 549 PRINTS PR00067 Catalase signature 339 365 1.1E-64 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_24630 4122a2ecc6bbe8e51a12c55a8d44ad94 549 PRINTS PR00067 Catalase signature 34 57 1.1E-64 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_24630 4122a2ecc6bbe8e51a12c55a8d44ad94 549 PRINTS PR00067 Catalase signature 123 140 1.1E-64 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_24630 4122a2ecc6bbe8e51a12c55a8d44ad94 549 PRINTS PR00067 Catalase signature 307 334 1.1E-64 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_07420 3b0fa3515745881b6d443758587899c0 286 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 280 7.5E-93 T 12-10-2018 IPR003797 DegV N288_07420 3b0fa3515745881b6d443758587899c0 286 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 282 1.4E-86 T 12-10-2018 IPR003797 DegV N288_07420 3b0fa3515745881b6d443758587899c0 286 Gene3D G3DSA:3.40.50.10170 1 151 2.1E-45 T 12-10-2018 N288_07420 3b0fa3515745881b6d443758587899c0 286 Gene3D G3DSA:3.30.1180.10 156 285 1.5E-48 T 12-10-2018 N288_07420 3b0fa3515745881b6d443758587899c0 286 SUPERFAMILY SSF82549 1 283 4.19E-88 T 12-10-2018 N288_13890 f3cc7a4f29c702e73dcd634dfe0603a8 485 Pfam PF00171 Aldehyde dehydrogenase family 17 480 8.8E-151 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 N288_13890 f3cc7a4f29c702e73dcd634dfe0603a8 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 N288_13890 f3cc7a4f29c702e73dcd634dfe0603a8 485 Gene3D G3DSA:3.40.309.10 254 454 5.9E-155 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 N288_13890 f3cc7a4f29c702e73dcd634dfe0603a8 485 Gene3D G3DSA:3.40.605.10 27 462 5.9E-155 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 N288_13890 f3cc7a4f29c702e73dcd634dfe0603a8 485 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 10 485 8.2E-188 T 12-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 N288_13890 f3cc7a4f29c702e73dcd634dfe0603a8 485 Hamap MF_01670 Malonate-semialdehyde dehydrogenase [iolA]. 3 485 70.768 T 12-10-2018 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642 N288_13890 f3cc7a4f29c702e73dcd634dfe0603a8 485 SUPERFAMILY SSF53720 8 484 1.57E-151 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 N288_15480 b9ec29b9a66edc91f1d76c161179e733 292 SUPERFAMILY SSF46689 9 80 6.99E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_15480 b9ec29b9a66edc91f1d76c161179e733 292 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 80 1.4E-20 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 N288_15480 b9ec29b9a66edc91f1d76c161179e733 292 Gene3D G3DSA:1.10.10.10 2 84 6.7E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_15480 b9ec29b9a66edc91f1d76c161179e733 292 Pfam PF01380 SIS domain 129 258 4.9E-20 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 N288_15480 b9ec29b9a66edc91f1d76c161179e733 292 Gene3D G3DSA:3.40.50.10490 96 283 3.9E-45 T 12-10-2018 N288_15480 b9ec29b9a66edc91f1d76c161179e733 292 SUPERFAMILY SSF53697 97 281 5.31E-40 T 12-10-2018 N288_15830 29cae614a42039e3627da4b942d0cb97 384 SMART SM00388 163 228 1.4E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_15830 29cae614a42039e3627da4b942d0cb97 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 325 1.0E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_15830 29cae614a42039e3627da4b942d0cb97 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 358 1.0E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_15830 29cae614a42039e3627da4b942d0cb97 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 339 1.0E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_15830 29cae614a42039e3627da4b942d0cb97 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 376 1.0E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_15830 29cae614a42039e3627da4b942d0cb97 384 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 273 378 1.4E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_15830 29cae614a42039e3627da4b942d0cb97 384 Gene3D G3DSA:3.30.565.10 240 380 1.9E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_15830 29cae614a42039e3627da4b942d0cb97 384 Pfam PF00512 His Kinase A (phospho-acceptor) domain 165 226 1.2E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_15830 29cae614a42039e3627da4b942d0cb97 384 SUPERFAMILY SSF55785 45 149 4.0E-9 T 12-10-2018 IPR035965 PAS domain superfamily N288_15830 29cae614a42039e3627da4b942d0cb97 384 SMART SM00387 273 379 3.4E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_15830 29cae614a42039e3627da4b942d0cb97 384 SUPERFAMILY SSF55874 251 376 1.7E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_15830 29cae614a42039e3627da4b942d0cb97 384 Gene3D G3DSA:1.10.287.130 167 225 3.7E-16 T 12-10-2018 N288_15830 29cae614a42039e3627da4b942d0cb97 384 SUPERFAMILY SSF47384 158 226 1.69E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_15830 29cae614a42039e3627da4b942d0cb97 384 Gene3D G3DSA:3.30.450.20 41 152 7.0E-9 T 12-10-2018 N288_20365 04aae41c9ff56978517f25bb2a1efaaa 187 SMART SM00947 26 182 3.3E-33 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 N288_20365 04aae41c9ff56978517f25bb2a1efaaa 187 Gene3D G3DSA:3.40.1050.10 2 183 1.1E-44 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 N288_20365 04aae41c9ff56978517f25bb2a1efaaa 187 Pfam PF00484 Carbonic anhydrase 34 178 6.9E-17 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 N288_20365 04aae41c9ff56978517f25bb2a1efaaa 187 SUPERFAMILY SSF53056 1 181 3.14E-39 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 N288_15455 31775619e8803a3c9f2397001d194bbe 337 Pfam PF06463 Molybdenum Cofactor Synthesis C 188 314 2.9E-37 T 12-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 N288_15455 31775619e8803a3c9f2397001d194bbe 337 SUPERFAMILY SSF102114 3 304 6.41E-83 T 12-10-2018 N288_15455 31775619e8803a3c9f2397001d194bbe 337 Gene3D G3DSA:3.20.20.70 1 337 8.1E-108 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_15455 31775619e8803a3c9f2397001d194bbe 337 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 2 337 41.564 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 N288_15455 31775619e8803a3c9f2397001d194bbe 337 Pfam PF04055 Radical SAM superfamily 15 181 1.6E-34 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 N288_15455 31775619e8803a3c9f2397001d194bbe 337 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 2 337 1.9E-120 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 N288_15455 31775619e8803a3c9f2397001d194bbe 337 SMART SM00729 11 220 2.1E-18 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 N288_15455 31775619e8803a3c9f2397001d194bbe 337 Pfam PF13353 4Fe-4S single cluster domain 19 108 1.5E-6 T 12-10-2018 N288_15455 31775619e8803a3c9f2397001d194bbe 337 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 17 28 - T 12-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 N288_16480 641eec0ac18cbf1f7924bf763576ea29 160 SUPERFAMILY SSF52833 1 158 2.17E-59 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_16480 641eec0ac18cbf1f7924bf763576ea29 160 PIRSF PIRSF000303 1 160 3.1E-64 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 N288_16480 641eec0ac18cbf1f7924bf763576ea29 160 PRINTS PR01011 Glutathione peroxidase family signature 122 131 6.8E-19 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 N288_16480 641eec0ac18cbf1f7924bf763576ea29 160 PRINTS PR01011 Glutathione peroxidase family signature 21 38 6.8E-19 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 N288_16480 641eec0ac18cbf1f7924bf763576ea29 160 PRINTS PR01011 Glutathione peroxidase family signature 56 72 6.8E-19 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 N288_16480 641eec0ac18cbf1f7924bf763576ea29 160 Gene3D G3DSA:3.40.30.10 1 160 1.0E-69 T 12-10-2018 N288_16480 641eec0ac18cbf1f7924bf763576ea29 160 Pfam PF00255 Glutathione peroxidase 3 109 7.0E-43 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 N288_16480 641eec0ac18cbf1f7924bf763576ea29 160 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 12-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 N288_19330 e410fc8265f33a1b0d261a727e67b4c0 266 Gene3D G3DSA:3.40.50.1860 94 206 4.8E-99 T 12-10-2018 N288_19330 e410fc8265f33a1b0d261a727e67b4c0 266 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 214 6.0E-40 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 N288_19330 e410fc8265f33a1b0d261a727e67b4c0 266 SUPERFAMILY SSF53681 4 106 3.14E-37 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 N288_19330 e410fc8265f33a1b0d261a727e67b4c0 266 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 179 189 - T 12-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 N288_19330 e410fc8265f33a1b0d261a727e67b4c0 266 Hamap MF_00258 Glutamate racemase [murI]. 3 255 41.271 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 N288_19330 e410fc8265f33a1b0d261a727e67b4c0 266 Gene3D G3DSA:3.40.50.1860 5 253 4.8E-99 T 12-10-2018 N288_19330 e410fc8265f33a1b0d261a727e67b4c0 266 TIGRFAM TIGR00067 glut_race: glutamate racemase 5 253 1.4E-85 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 N288_19330 e410fc8265f33a1b0d261a727e67b4c0 266 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 69 77 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 N288_19330 e410fc8265f33a1b0d261a727e67b4c0 266 SUPERFAMILY SSF53681 109 262 1.57E-40 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 N288_09090 8cce0d8028f4662e73e4387daf701167 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 56 6.9E-29 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09090 8cce0d8028f4662e73e4387daf701167 57 Pfam PF01783 Ribosomal L32p protein family 2 56 1.8E-28 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09090 8cce0d8028f4662e73e4387daf701167 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 20.326 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09090 8cce0d8028f4662e73e4387daf701167 57 SUPERFAMILY SSF57829 1 55 1.4E-22 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 N288_09855 3837158a4dd12399e64f90b90621ce21 233 SUPERFAMILY SSF52313 6 227 1.01E-99 T 12-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily N288_09855 3837158a4dd12399e64f90b90621ce21 233 Gene3D G3DSA:1.10.287.610 103 150 1.1E-95 T 12-10-2018 N288_09855 3837158a4dd12399e64f90b90621ce21 233 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 N288_09855 3837158a4dd12399e64f90b90621ce21 233 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 228 43.672 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09855 3837158a4dd12399e64f90b90621ce21 233 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 1.6E-113 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09855 3837158a4dd12399e64f90b90621ce21 233 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 N288_09855 3837158a4dd12399e64f90b90621ce21 233 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.0E-41 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_09855 3837158a4dd12399e64f90b90621ce21 233 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.0E-41 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_09855 3837158a4dd12399e64f90b90621ce21 233 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.0E-41 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_09855 3837158a4dd12399e64f90b90621ce21 233 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.0E-41 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_09855 3837158a4dd12399e64f90b90621ce21 233 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.0E-41 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_09855 3837158a4dd12399e64f90b90621ce21 233 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.0E-41 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_09855 3837158a4dd12399e64f90b90621ce21 233 Gene3D G3DSA:3.40.50.10490 8 219 1.1E-95 T 12-10-2018 N288_09855 3837158a4dd12399e64f90b90621ce21 233 Pfam PF00318 Ribosomal protein S2 9 224 1.9E-101 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_01115 f5c709cf81d6d11ea1bfce3d9b54c781 211 Pfam PF16571 FBP C-terminal treble-clef zinc-finger 99 203 2.9E-7 T 12-10-2018 IPR032330 Elongation factor G-binding protein, C-terminal treble-clef zinc-finger N288_01115 f5c709cf81d6d11ea1bfce3d9b54c781 211 Pfam PF07299 Elongation factor G-binding protein, N-terminal 4 86 3.9E-29 T 12-10-2018 IPR010841 Elongation factor G-binding protein, N-terminal N288_01115 f5c709cf81d6d11ea1bfce3d9b54c781 211 Gene3D G3DSA:1.20.1280.250 1 84 5.9E-15 T 12-10-2018 IPR038344 EF-G binding protein, N-terminal domain superfamily N288_21505 3f845c77f8de6fbeef820d6248c8f74c 517 Gene3D G3DSA:1.10.3720.10 17 209 4.9E-35 T 12-10-2018 IPR035906 MetI-like superfamily N288_21505 3f845c77f8de6fbeef820d6248c8f74c 517 Gene3D G3DSA:3.40.190.10 250 511 5.1E-97 T 12-10-2018 N288_21505 3f845c77f8de6fbeef820d6248c8f74c 517 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 213 4.3E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_21505 3f845c77f8de6fbeef820d6248c8f74c 517 Gene3D G3DSA:3.40.190.120 352 455 5.1E-97 T 12-10-2018 N288_21505 3f845c77f8de6fbeef820d6248c8f74c 517 SUPERFAMILY SSF161098 17 205 5.23E-42 T 12-10-2018 IPR035906 MetI-like superfamily N288_21505 3f845c77f8de6fbeef820d6248c8f74c 517 SUPERFAMILY SSF53850 246 515 5.91E-76 T 12-10-2018 N288_21505 3f845c77f8de6fbeef820d6248c8f74c 517 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 246 512 3.0E-66 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 N288_09475 1799ff97d75d40010e063680b556fe8a 679 SUPERFAMILY SSF50249 2 166 7.37E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_09475 1799ff97d75d40010e063680b556fe8a 679 SUPERFAMILY SSF52540 366 626 3.46E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_09475 1799ff97d75d40010e063680b556fe8a 679 SUPERFAMILY SSF52540 170 433 1.39E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_09475 1799ff97d75d40010e063680b556fe8a 679 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 24 645 1.7E-248 T 12-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 N288_09475 1799ff97d75d40010e063680b556fe8a 679 Gene3D G3DSA:3.40.50.300 198 431 3.9E-88 T 12-10-2018 N288_09475 1799ff97d75d40010e063680b556fe8a 679 Pfam PF17191 RecG wedge domain 7 157 5.6E-15 T 12-10-2018 IPR033454 RecG, wedge domain N288_09475 1799ff97d75d40010e063680b556fe8a 679 Pfam PF00270 DEAD/DEAH box helicase 257 412 4.3E-18 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 N288_09475 1799ff97d75d40010e063680b556fe8a 679 Gene3D G3DSA:2.40.50.140 42 134 1.3E-11 T 12-10-2018 N288_09475 1799ff97d75d40010e063680b556fe8a 679 Pfam PF00271 Helicase conserved C-terminal domain 450 569 7.3E-19 T 12-10-2018 IPR001650 Helicase, C-terminal N288_09475 1799ff97d75d40010e063680b556fe8a 679 SMART SM00490 489 570 9.2E-21 T 12-10-2018 IPR001650 Helicase, C-terminal N288_09475 1799ff97d75d40010e063680b556fe8a 679 SMART SM00487 250 440 2.3E-33 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_09475 1799ff97d75d40010e063680b556fe8a 679 Gene3D G3DSA:3.40.50.300 438 610 1.8E-56 T 12-10-2018 N288_20075 3588a921680381203c6ace4ab10b1e11 472 Gene3D G3DSA:3.40.630.10 16 470 2.8E-169 T 12-10-2018 N288_20075 3588a921680381203c6ace4ab10b1e11 472 Gene3D G3DSA:3.30.70.360 187 386 2.8E-169 T 12-10-2018 N288_20075 3588a921680381203c6ace4ab10b1e11 472 Pfam PF01546 Peptidase family M20/M25/M40 87 468 2.1E-31 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_20075 3588a921680381203c6ace4ab10b1e11 472 Gene3D G3DSA:3.30.70.360 209 297 2.8E-169 T 12-10-2018 N288_20075 3588a921680381203c6ace4ab10b1e11 472 SUPERFAMILY SSF55031 187 384 1.95E-50 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_20075 3588a921680381203c6ace4ab10b1e11 472 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 16 467 4.0E-176 T 12-10-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 N288_20075 3588a921680381203c6ace4ab10b1e11 472 SUPERFAMILY SSF53187 5 471 2.51E-68 T 12-10-2018 N288_23940 29c9fc43ce19b200d23084efd0d49cf7 376 Gene3D G3DSA:1.20.140.10 234 376 5.7E-57 T 12-10-2018 N288_23940 29c9fc43ce19b200d23084efd0d49cf7 376 Gene3D G3DSA:1.10.540.10 1 119 1.8E-45 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 N288_23940 29c9fc43ce19b200d23084efd0d49cf7 376 Gene3D G3DSA:2.40.110.10 120 233 1.6E-44 T 12-10-2018 N288_23940 29c9fc43ce19b200d23084efd0d49cf7 376 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 N288_23940 29c9fc43ce19b200d23084efd0d49cf7 376 SUPERFAMILY SSF47203 227 376 2.26E-59 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 N288_23940 29c9fc43ce19b200d23084efd0d49cf7 376 SUPERFAMILY SSF56645 2 240 4.58E-85 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 N288_23940 29c9fc43ce19b200d23084efd0d49cf7 376 PIRSF PIRSF016578 4 365 8.3E-19 T 12-10-2018 N288_23940 29c9fc43ce19b200d23084efd0d49cf7 376 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 4.0E-25 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 N288_23940 29c9fc43ce19b200d23084efd0d49cf7 376 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 N288_23940 29c9fc43ce19b200d23084efd0d49cf7 376 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 375 2.8E-53 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 N288_23940 29c9fc43ce19b200d23084efd0d49cf7 376 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 7.2E-40 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 N288_03840 057df635961d0880aab24d6ec33d12a0 180 Gene3D G3DSA:3.40.50.1000 4 173 1.8E-41 T 12-10-2018 IPR023214 HAD superfamily N288_03840 057df635961d0880aab24d6ec33d12a0 180 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 137 2.3E-24 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 N288_03840 057df635961d0880aab24d6ec33d12a0 180 PIRSF PIRSF004682 1 171 2.9E-37 T 12-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 N288_03840 057df635961d0880aab24d6ec33d12a0 180 Pfam PF13242 HAD-hyrolase-like 90 166 3.1E-17 T 12-10-2018 N288_03840 057df635961d0880aab24d6ec33d12a0 180 SUPERFAMILY SSF56784 2 170 3.28E-35 T 12-10-2018 IPR036412 HAD-like superfamily N288_03840 057df635961d0880aab24d6ec33d12a0 180 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 129 8.9E-25 T 12-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 N288_19070 15cbd2a2782b26d39fc42d169be73527 152 Gene3D G3DSA:3.30.700.10 14 118 9.3E-13 T 12-10-2018 N288_19070 15cbd2a2782b26d39fc42d169be73527 152 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 4.6E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site N288_19070 15cbd2a2782b26d39fc42d169be73527 152 SUPERFAMILY SSF54523 14 68 4.47E-11 T 12-10-2018 N288_19070 15cbd2a2782b26d39fc42d169be73527 152 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 32 2.7E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site N288_20450 05e7669021038444b68b44ad0a37ad67 381 SUPERFAMILY SSF53448 3 340 1.31E-85 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_20450 05e7669021038444b68b44ad0a37ad67 381 Gene3D G3DSA:2.160.10.10 275 381 6.0E-26 T 12-10-2018 N288_20450 05e7669021038444b68b44ad0a37ad67 381 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 99 107 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 N288_20450 05e7669021038444b68b44ad0a37ad67 381 SUPERFAMILY SSF51161 282 364 2.2E-14 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily N288_20450 05e7669021038444b68b44ad0a37ad67 381 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 12 31 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 N288_20450 05e7669021038444b68b44ad0a37ad67 381 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 190 200 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 N288_20450 05e7669021038444b68b44ad0a37ad67 381 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 6 360 7.4E-143 T 12-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 N288_20450 05e7669021038444b68b44ad0a37ad67 381 Gene3D G3DSA:3.90.550.10 1 274 2.5E-90 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_20450 05e7669021038444b68b44ad0a37ad67 381 Pfam PF00483 Nucleotidyl transferase 8 260 6.8E-70 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 N288_20450 05e7669021038444b68b44ad0a37ad67 381 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 3 376 48.492 T 12-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 SUPERFAMILY SSF50692 786 933 5.2E-35 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 77 4.6E-14 T 12-10-2018 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 259 312 2.0E-18 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 SMART SM00929 84 125 4.9E-11 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 263 280 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 Pfam PF00037 4Fe-4S binding domain 186 206 1.4E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 SUPERFAMILY SSF54292 5 74 1.27E-15 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 Gene3D G3DSA:2.20.25.90 258 313 2.1E-19 T 12-10-2018 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 Gene3D G3DSA:2.40.40.20 814 934 3.4E-28 T 12-10-2018 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 263 931 4.2E-246 T 12-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 Gene3D G3DSA:3.10.20.740 4 125 8.5E-27 T 12-10-2018 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 SUPERFAMILY SSF53706 256 812 4.71E-191 T 12-10-2018 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 Pfam PF01568 Molydopterin dinucleotide binding domain 822 928 8.7E-21 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 Gene3D G3DSA:3.40.228.10 393 592 1.7E-161 T 12-10-2018 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 Gene3D G3DSA:3.40.50.740 320 779 1.7E-161 T 12-10-2018 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 Gene3D G3DSA:3.30.70.20 127 209 8.3E-22 T 12-10-2018 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 85 123 7.4E-11 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 SUPERFAMILY SSF54862 77 212 4.02E-30 T 12-10-2018 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 PIRSF PIRSF036643 2 965 0.0 T 12-10-2018 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 191 202 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 Pfam PF00384 Molybdopterin oxidoreductase 315 739 9.6E-79 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_25760 7f204bb0085425b4a6ad9d5fa4c63af6 990 SMART SM00926 258 312 6.1E-17 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_14645 2c22fc5a55b987bdf0ec9b120d9c454e 562 SMART SM00304 203 256 2.0E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_14645 2c22fc5a55b987bdf0ec9b120d9c454e 562 SMART SM00304 501 557 55.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_14645 2c22fc5a55b987bdf0ec9b120d9c454e 562 Gene3D G3DSA:1.10.287.950 258 560 7.9E-74 T 12-10-2018 N288_14645 2c22fc5a55b987bdf0ec9b120d9c454e 562 SMART SM00283 285 560 6.8E-93 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_14645 2c22fc5a55b987bdf0ec9b120d9c454e 562 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 163 1.9E-10 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain N288_14645 2c22fc5a55b987bdf0ec9b120d9c454e 562 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 512 4.4E-49 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_14645 2c22fc5a55b987bdf0ec9b120d9c454e 562 Pfam PF00672 HAMP domain 203 252 1.3E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_14645 2c22fc5a55b987bdf0ec9b120d9c454e 562 Gene3D G3DSA:1.20.1480.50 164 257 8.3E-16 T 12-10-2018 N288_14645 2c22fc5a55b987bdf0ec9b120d9c454e 562 SUPERFAMILY SSF58104 228 559 3.4E-77 T 12-10-2018 N288_18990 f92bcf0638940a9f895cbf4e3aac0ee5 96 Pfam PF01016 Ribosomal L27 protein 10 89 4.6E-34 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18990 f92bcf0638940a9f895cbf4e3aac0ee5 96 SUPERFAMILY SSF110324 10 91 8.02E-32 T 12-10-2018 N288_18990 f92bcf0638940a9f895cbf4e3aac0ee5 96 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 36 77 5.0E-16 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18990 f92bcf0638940a9f895cbf4e3aac0ee5 96 PRINTS PR00063 Ribosomal protein L27 signature 62 86 3.6E-38 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18990 f92bcf0638940a9f895cbf4e3aac0ee5 96 PRINTS PR00063 Ribosomal protein L27 signature 12 36 3.6E-38 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18990 f92bcf0638940a9f895cbf4e3aac0ee5 96 PRINTS PR00063 Ribosomal protein L27 signature 37 61 3.6E-38 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18990 f92bcf0638940a9f895cbf4e3aac0ee5 96 TIGRFAM TIGR00062 L27: ribosomal protein bL27 9 89 2.1E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18990 f92bcf0638940a9f895cbf4e3aac0ee5 96 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 9 92 27.006 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18990 f92bcf0638940a9f895cbf4e3aac0ee5 96 ProSitePatterns PS00831 Ribosomal protein L27 signature. 42 56 - T 12-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_18990 f92bcf0638940a9f895cbf4e3aac0ee5 96 Gene3D G3DSA:2.40.50.100 28 93 1.1E-25 T 12-10-2018 N288_14625 517d5f9065394b3b32ebadb47a053f2a 491 Gene3D G3DSA:1.10.287.130 238 308 7.8E-12 T 12-10-2018 N288_14625 517d5f9065394b3b32ebadb47a053f2a 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 1.3E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_14625 517d5f9065394b3b32ebadb47a053f2a 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 482 1.3E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_14625 517d5f9065394b3b32ebadb47a053f2a 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 439 1.3E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_14625 517d5f9065394b3b32ebadb47a053f2a 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 463 1.3E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_14625 517d5f9065394b3b32ebadb47a053f2a 491 SMART SM00387 354 485 4.9E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_14625 517d5f9065394b3b32ebadb47a053f2a 491 Gene3D G3DSA:3.30.565.10 309 487 1.8E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_14625 517d5f9065394b3b32ebadb47a053f2a 491 SUPERFAMILY SSF47384 227 310 9.22E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_14625 517d5f9065394b3b32ebadb47a053f2a 491 SMART SM00304 183 234 0.0054 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_14625 517d5f9065394b3b32ebadb47a053f2a 491 Gene3D G3DSA:1.20.1480.50 147 237 1.0E-8 T 12-10-2018 N288_14625 517d5f9065394b3b32ebadb47a053f2a 491 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 483 5.7E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_14625 517d5f9065394b3b32ebadb47a053f2a 491 SUPERFAMILY SSF55874 298 481 2.05E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_14625 517d5f9065394b3b32ebadb47a053f2a 491 SMART SM00388 242 309 2.1E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_14625 517d5f9065394b3b32ebadb47a053f2a 491 Pfam PF00512 His Kinase A (phospho-acceptor) domain 246 309 9.5E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_16050 cd6feed3f5b73439aed7c3ee4d0d2dd7 463 Gene3D G3DSA:1.10.8.500 189 237 1.1E-11 T 12-10-2018 N288_16050 cd6feed3f5b73439aed7c3ee4d0d2dd7 463 SMART SM00304 189 241 9.5E-15 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_16050 cd6feed3f5b73439aed7c3ee4d0d2dd7 463 SMART SM00388 242 306 4.5E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_16050 cd6feed3f5b73439aed7c3ee4d0d2dd7 463 SUPERFAMILY SSF158472 191 237 1.57E-11 T 12-10-2018 N288_16050 cd6feed3f5b73439aed7c3ee4d0d2dd7 463 SUPERFAMILY SSF47384 225 306 9.02E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_16050 cd6feed3f5b73439aed7c3ee4d0d2dd7 463 Pfam PF00672 HAMP domain 191 237 4.0E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_16050 cd6feed3f5b73439aed7c3ee4d0d2dd7 463 SMART SM00387 351 462 6.6E-38 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_16050 cd6feed3f5b73439aed7c3ee4d0d2dd7 463 Gene3D G3DSA:3.30.565.10 307 462 5.1E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_16050 cd6feed3f5b73439aed7c3ee4d0d2dd7 463 Gene3D G3DSA:1.10.287.130 238 306 1.4E-21 T 12-10-2018 N288_16050 cd6feed3f5b73439aed7c3ee4d0d2dd7 463 SUPERFAMILY SSF55874 296 460 7.07E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_16050 cd6feed3f5b73439aed7c3ee4d0d2dd7 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 460 2.1E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_16050 cd6feed3f5b73439aed7c3ee4d0d2dd7 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 305 1.1E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_16050 cd6feed3f5b73439aed7c3ee4d0d2dd7 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 1.5E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_16050 cd6feed3f5b73439aed7c3ee4d0d2dd7 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 401 1.5E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_16050 cd6feed3f5b73439aed7c3ee4d0d2dd7 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 459 1.5E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_16950 6d0838c9985d470a047170709b3923b9 267 TIGRFAM TIGR02878 spore_ypjB: sporulation protein YpjB 31 261 1.4E-79 T 12-10-2018 IPR014231 Sporulation protein YpjB N288_16950 6d0838c9985d470a047170709b3923b9 267 Pfam PF09577 Sporulation protein YpjB (SpoYpjB) 31 259 1.7E-96 T 12-10-2018 IPR014231 Sporulation protein YpjB N288_01870 61927271c9fba3ddb4ba2b41c1bfcf9c 377 Pfam PF01266 FAD dependent oxidoreductase 4 352 2.8E-50 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 N288_01870 61927271c9fba3ddb4ba2b41c1bfcf9c 377 SUPERFAMILY SSF54373 224 313 1.83E-14 T 12-10-2018 N288_01870 61927271c9fba3ddb4ba2b41c1bfcf9c 377 SUPERFAMILY SSF51905 1 367 1.94E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_01870 61927271c9fba3ddb4ba2b41c1bfcf9c 377 Gene3D G3DSA:3.50.50.60 5 352 2.5E-78 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_01870 61927271c9fba3ddb4ba2b41c1bfcf9c 377 Gene3D G3DSA:3.30.9.10 88 312 2.5E-78 T 12-10-2018 N288_14445 1db0749492e8add8b0a911b55c870afe 170 Pfam PF11553 Protein of unknown function (DUF3231) 2 168 2.9E-49 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_14445 1db0749492e8add8b0a911b55c870afe 170 Gene3D G3DSA:1.20.1260.10 1 156 4.0E-61 T 12-10-2018 IPR012347 Ferritin-like N288_05015 6bb88ce0baf98cb3e9ae20218ec83606 297 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 189 201 - T 12-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 N288_05015 6bb88ce0baf98cb3e9ae20218ec83606 297 Gene3D G3DSA:3.90.1200.10 101 292 1.7E-49 T 12-10-2018 N288_05015 6bb88ce0baf98cb3e9ae20218ec83606 297 SUPERFAMILY SSF56112 8 252 1.99E-30 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_05015 6bb88ce0baf98cb3e9ae20218ec83606 297 Pfam PF01636 Phosphotransferase enzyme family 27 243 8.4E-25 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase N288_05015 6bb88ce0baf98cb3e9ae20218ec83606 297 Gene3D G3DSA:3.30.200.20 2 96 3.7E-23 T 12-10-2018 N288_05420 800873e67093f155881685abbed84a69 473 Pfam PF03553 Na+/H+ antiporter family 157 467 5.6E-35 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 N288_08590 dad3fb3b24d87c75975bb3cbe2dc1cfb 445 Gene3D G3DSA:1.20.1250.20 246 438 2.6E-19 T 12-10-2018 N288_08590 dad3fb3b24d87c75975bb3cbe2dc1cfb 445 SUPERFAMILY SSF103473 29 433 2.88E-47 T 12-10-2018 IPR036259 MFS transporter superfamily N288_08590 dad3fb3b24d87c75975bb3cbe2dc1cfb 445 ProSitePatterns PS00217 Sugar transport proteins signature 2. 353 378 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_08590 dad3fb3b24d87c75975bb3cbe2dc1cfb 445 Gene3D G3DSA:1.20.1250.20 27 235 5.9E-19 T 12-10-2018 N288_08590 dad3fb3b24d87c75975bb3cbe2dc1cfb 445 Pfam PF11700 Vacuole effluxer Atg22 like 173 434 5.4E-36 T 12-10-2018 IPR024671 Autophagy-related protein 22-like N288_17220 41c2d60394596070d1baf92d2d4a3dc0 208 Pfam PF02517 CAAX protease self-immunity 100 180 7.5E-13 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 N288_22415 e858f13605dc18b171d6060ade0612df 478 SUPERFAMILY SSF53187 5 441 4.07E-55 T 12-10-2018 N288_22415 e858f13605dc18b171d6060ade0612df 478 Gene3D G3DSA:3.40.630.10 18 322 2.8E-81 T 12-10-2018 N288_22415 e858f13605dc18b171d6060ade0612df 478 Gene3D G3DSA:3.40.630.10 353 457 1.5E-17 T 12-10-2018 N288_22415 e858f13605dc18b171d6060ade0612df 478 Gene3D G3DSA:3.30.70.360 181 298 2.8E-81 T 12-10-2018 N288_22415 e858f13605dc18b171d6060ade0612df 478 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 18 423 2.9E-86 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 N288_22415 e858f13605dc18b171d6060ade0612df 478 PIRSF PIRSF037227 1 475 7.4E-209 T 12-10-2018 IPR017145 Aminobenzoyl-glutamate utilization protein B N288_22415 e858f13605dc18b171d6060ade0612df 478 SUPERFAMILY SSF55031 185 290 5.58E-18 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_10270 7a43b3728eb3b99769f4bfd3fc961a32 422 Pfam PF06838 Methionine gamma-lyase 12 412 5.2E-209 T 12-10-2018 IPR009651 Putative methionine gamma-lyase N288_10270 7a43b3728eb3b99769f4bfd3fc961a32 422 SUPERFAMILY SSF53383 60 398 2.24E-48 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_10270 7a43b3728eb3b99769f4bfd3fc961a32 422 Gene3D G3DSA:3.40.640.10 58 271 4.1E-182 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_10270 7a43b3728eb3b99769f4bfd3fc961a32 422 Gene3D G3DSA:3.90.1150.60 17 411 4.1E-182 T 12-10-2018 N288_02315 fe074fb2ff4034b44c07c5e4881ef462 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 222 1.4E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_02315 fe074fb2ff4034b44c07c5e4881ef462 224 SMART SM00448 1 113 1.3E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_02315 fe074fb2ff4034b44c07c5e4881ef462 224 Gene3D G3DSA:3.40.50.2300 1 121 4.9E-36 T 12-10-2018 N288_02315 fe074fb2ff4034b44c07c5e4881ef462 224 SUPERFAMILY SSF46894 124 223 5.67E-30 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_02315 fe074fb2ff4034b44c07c5e4881ef462 224 Pfam PF00072 Response regulator receiver domain 3 113 1.0E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_02315 fe074fb2ff4034b44c07c5e4881ef462 224 SMART SM00862 147 222 8.3E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_02315 fe074fb2ff4034b44c07c5e4881ef462 224 SUPERFAMILY SSF52172 2 125 1.14E-36 T 12-10-2018 IPR011006 CheY-like superfamily N288_02315 fe074fb2ff4034b44c07c5e4881ef462 224 Gene3D G3DSA:1.10.10.10 123 224 9.7E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_21155 417550528c64b1860044fc6244378035 341 SMART SM00930 263 338 4.2E-30 T 12-10-2018 IPR018449 NIL domain N288_21155 417550528c64b1860044fc6244378035 341 Pfam PF00005 ABC transporter 22 169 8.7E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_21155 417550528c64b1860044fc6244378035 341 SUPERFAMILY SSF55021 249 340 1.37E-24 T 12-10-2018 N288_21155 417550528c64b1860044fc6244378035 341 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_21155 417550528c64b1860044fc6244378035 341 Gene3D G3DSA:3.40.50.300 1 246 6.6E-77 T 12-10-2018 N288_21155 417550528c64b1860044fc6244378035 341 SUPERFAMILY SSF52540 1 240 6.49E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_21155 417550528c64b1860044fc6244378035 341 Gene3D G3DSA:3.30.70.260 247 341 4.9E-31 T 12-10-2018 N288_21155 417550528c64b1860044fc6244378035 341 SMART SM00382 30 218 5.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_21155 417550528c64b1860044fc6244378035 341 Pfam PF09383 NIL domain 265 337 2.2E-22 T 12-10-2018 IPR018449 NIL domain N288_21020 23e83a48a9c5c5c2ac2f5b8c78e11429 254 Gene3D G3DSA:3.40.50.1000 84 179 2.6E-89 T 12-10-2018 IPR023214 HAD superfamily N288_21020 23e83a48a9c5c5c2ac2f5b8c78e11429 254 Pfam PF13344 Haloacid dehalogenase-like hydrolase 8 106 3.3E-29 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA N288_21020 23e83a48a9c5c5c2ac2f5b8c78e11429 254 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 8 228 5.9E-44 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA N288_21020 23e83a48a9c5c5c2ac2f5b8c78e11429 254 SUPERFAMILY SSF56784 3 252 1.12E-74 T 12-10-2018 IPR036412 HAD-like superfamily N288_21020 23e83a48a9c5c5c2ac2f5b8c78e11429 254 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 4 252 2.1E-126 T 12-10-2018 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 N288_21020 23e83a48a9c5c5c2ac2f5b8c78e11429 254 Pfam PF13242 HAD-hyrolase-like 179 251 1.5E-22 T 12-10-2018 N288_21020 23e83a48a9c5c5c2ac2f5b8c78e11429 254 Gene3D G3DSA:3.40.50.1000 5 230 2.6E-89 T 12-10-2018 IPR023214 HAD superfamily N288_21020 23e83a48a9c5c5c2ac2f5b8c78e11429 254 PIRSF PIRSF000915 1 253 2.1E-61 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA N288_16405 5ddc374a6946111d7e08482ecb88eadc 444 Gene3D G3DSA:3.40.50.2020 99 249 1.3E-6 T 12-10-2018 N288_16405 5ddc374a6946111d7e08482ecb88eadc 444 PIRSF PIRSF020967 99 252 3.1E-22 T 12-10-2018 IPR011214 Uncharacterised conserved protein UCP020967 N288_16405 5ddc374a6946111d7e08482ecb88eadc 444 PIRSF PIRSF020967 8 78 4.9E-11 T 12-10-2018 IPR011214 Uncharacterised conserved protein UCP020967 N288_16405 5ddc374a6946111d7e08482ecb88eadc 444 PIRSF PIRSF020967 289 437 1.8E-12 T 12-10-2018 IPR011214 Uncharacterised conserved protein UCP020967 N288_16405 5ddc374a6946111d7e08482ecb88eadc 444 SUPERFAMILY SSF53271 106 213 2.41E-7 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like N288_16405 5ddc374a6946111d7e08482ecb88eadc 444 Pfam PF15609 Phosphoribosyl transferase 27 240 3.8E-71 T 12-10-2018 N288_16405 5ddc374a6946111d7e08482ecb88eadc 444 Pfam PF12500 TRSP domain C terminus to PRTase_2 300 424 1.2E-37 T 12-10-2018 IPR022537 TRSP domain N288_02975 8ca411102eaf0f20b855451b3b032b69 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 166 1.1E-26 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_02975 8ca411102eaf0f20b855451b3b032b69 169 Gene3D G3DSA:1.10.10.10 109 168 6.8E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_02975 8ca411102eaf0f20b855451b3b032b69 169 Pfam PF08281 Sigma-70, region 4 112 161 8.1E-13 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_02975 8ca411102eaf0f20b855451b3b032b69 169 SUPERFAMILY SSF88659 107 167 3.49E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_02975 8ca411102eaf0f20b855451b3b032b69 169 Gene3D G3DSA:1.10.1740.10 1 108 1.9E-24 T 12-10-2018 N288_02975 8ca411102eaf0f20b855451b3b032b69 169 Pfam PF04542 Sigma-70 region 2 16 79 1.1E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_02975 8ca411102eaf0f20b855451b3b032b69 169 SUPERFAMILY SSF88946 4 94 6.47E-23 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_02695 6eaf9d6439d285510903cb142ee61db5 744 Pfam PF00990 Diguanylate cyclase, GGDEF domain 323 476 2.4E-43 T 12-10-2018 IPR000160 GGDEF domain N288_02695 6eaf9d6439d285510903cb142ee61db5 744 SMART SM00267 312 480 4.2E-58 T 12-10-2018 IPR000160 GGDEF domain N288_02695 6eaf9d6439d285510903cb142ee61db5 744 SUPERFAMILY SSF141868 495 742 7.72E-88 T 12-10-2018 IPR035919 EAL domain superfamily N288_02695 6eaf9d6439d285510903cb142ee61db5 744 Pfam PF08447 PAS fold 105 187 3.5E-16 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 N288_02695 6eaf9d6439d285510903cb142ee61db5 744 SUPERFAMILY SSF55073 328 482 1.73E-44 T 12-10-2018 IPR029787 Nucleotide cyclase N288_02695 6eaf9d6439d285510903cb142ee61db5 744 Pfam PF13426 PAS domain 216 311 7.2E-12 T 12-10-2018 IPR000014 PAS domain N288_02695 6eaf9d6439d285510903cb142ee61db5 744 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 75 198 2.1E-9 T 12-10-2018 IPR000014 PAS domain N288_02695 6eaf9d6439d285510903cb142ee61db5 744 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 195 317 4.5E-19 T 12-10-2018 IPR000014 PAS domain N288_02695 6eaf9d6439d285510903cb142ee61db5 744 SMART SM00052 490 735 4.4E-112 T 12-10-2018 IPR001633 EAL domain N288_02695 6eaf9d6439d285510903cb142ee61db5 744 SMART SM00091 199 265 1.3E-4 T 12-10-2018 IPR000014 PAS domain N288_02695 6eaf9d6439d285510903cb142ee61db5 744 SMART SM00091 79 147 4.2 T 12-10-2018 IPR000014 PAS domain N288_02695 6eaf9d6439d285510903cb142ee61db5 744 Gene3D G3DSA:3.30.70.270 318 492 1.3E-57 T 12-10-2018 N288_02695 6eaf9d6439d285510903cb142ee61db5 744 SMART SM00086 272 312 7.1E-4 T 12-10-2018 IPR001610 PAC motif N288_02695 6eaf9d6439d285510903cb142ee61db5 744 SMART SM00086 152 194 8.2E-7 T 12-10-2018 IPR001610 PAC motif N288_02695 6eaf9d6439d285510903cb142ee61db5 744 Gene3D G3DSA:3.20.20.450 493 742 1.3E-98 T 12-10-2018 IPR035919 EAL domain superfamily N288_02695 6eaf9d6439d285510903cb142ee61db5 744 Gene3D G3DSA:3.30.450.20 194 310 4.7E-19 T 12-10-2018 N288_02695 6eaf9d6439d285510903cb142ee61db5 744 Gene3D G3DSA:3.30.450.20 70 192 2.7E-25 T 12-10-2018 N288_02695 6eaf9d6439d285510903cb142ee61db5 744 SUPERFAMILY SSF55785 195 310 6.98E-16 T 12-10-2018 IPR035965 PAS domain superfamily N288_02695 6eaf9d6439d285510903cb142ee61db5 744 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 320 478 1.0E-36 T 12-10-2018 IPR000160 GGDEF domain N288_02695 6eaf9d6439d285510903cb142ee61db5 744 Pfam PF00563 EAL domain 498 730 4.9E-75 T 12-10-2018 IPR001633 EAL domain N288_02695 6eaf9d6439d285510903cb142ee61db5 744 SUPERFAMILY SSF55785 84 195 5.06E-18 T 12-10-2018 IPR035965 PAS domain superfamily N288_09840 fc94ff149cf60a0dcfe2889ea27bb7c6 253 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 27 250 2.2E-78 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 N288_09840 fc94ff149cf60a0dcfe2889ea27bb7c6 253 SUPERFAMILY SSF88659 100 166 7.85E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_09840 fc94ff149cf60a0dcfe2889ea27bb7c6 253 Pfam PF04539 Sigma-70 region 3 106 166 6.3E-9 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 N288_09840 fc94ff149cf60a0dcfe2889ea27bb7c6 253 SUPERFAMILY SSF88659 164 251 1.07E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_09840 fc94ff149cf60a0dcfe2889ea27bb7c6 253 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 219 245 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09840 fc94ff149cf60a0dcfe2889ea27bb7c6 253 Gene3D G3DSA:1.10.1740.10 14 96 1.2E-25 T 12-10-2018 N288_09840 fc94ff149cf60a0dcfe2889ea27bb7c6 253 PRINTS PR00046 Major sigma-70 factor signature 54 67 3.8E-10 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09840 fc94ff149cf60a0dcfe2889ea27bb7c6 253 PRINTS PR00046 Major sigma-70 factor signature 202 214 3.8E-10 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09840 fc94ff149cf60a0dcfe2889ea27bb7c6 253 PRINTS PR00046 Major sigma-70 factor signature 234 245 3.8E-10 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09840 fc94ff149cf60a0dcfe2889ea27bb7c6 253 PRINTS PR00046 Major sigma-70 factor signature 78 86 3.8E-10 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09840 fc94ff149cf60a0dcfe2889ea27bb7c6 253 PRINTS PR00046 Major sigma-70 factor signature 219 234 3.8E-10 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09840 fc94ff149cf60a0dcfe2889ea27bb7c6 253 SUPERFAMILY SSF88946 7 99 4.4E-24 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_09840 fc94ff149cf60a0dcfe2889ea27bb7c6 253 Pfam PF04545 Sigma-70, region 4 200 247 4.1E-15 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 N288_09840 fc94ff149cf60a0dcfe2889ea27bb7c6 253 Gene3D G3DSA:1.20.140.160 98 252 1.2E-42 T 12-10-2018 N288_09840 fc94ff149cf60a0dcfe2889ea27bb7c6 253 Pfam PF04542 Sigma-70 region 2 27 99 1.7E-12 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_09840 fc94ff149cf60a0dcfe2889ea27bb7c6 253 PIRSF PIRSF000770 4 253 2.9E-44 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09840 fc94ff149cf60a0dcfe2889ea27bb7c6 253 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 248 4.8E-31 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_04080 5fde8ab2f047a5133465441b1beb1535 443 SUPERFAMILY SSF52540 34 326 4.28E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_04080 5fde8ab2f047a5133465441b1beb1535 443 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 230 306 1.4E-12 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 N288_04080 5fde8ab2f047a5133465441b1beb1535 443 Pfam PF13175 AAA ATPase domain 34 116 4.8E-9 T 12-10-2018 N288_04080 5fde8ab2f047a5133465441b1beb1535 443 Gene3D G3DSA:3.40.50.300 33 338 6.5E-29 T 12-10-2018 N288_01815 c0f4962671b5ee54555e452c7ced09e6 413 Pfam PF07690 Major Facilitator Superfamily 15 349 1.8E-15 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_01815 c0f4962671b5ee54555e452c7ced09e6 413 Gene3D G3DSA:1.20.1250.20 10 394 3.4E-33 T 12-10-2018 N288_01815 c0f4962671b5ee54555e452c7ced09e6 413 SUPERFAMILY SSF103473 15 398 1.96E-35 T 12-10-2018 IPR036259 MFS transporter superfamily N288_00685 abc65c18de68e2c7a1522a0a1ed8e219 166 Pfam PF00466 Ribosomal protein L10 5 101 3.2E-30 T 12-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 N288_00685 abc65c18de68e2c7a1522a0a1ed8e219 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 29.545 T 12-10-2018 IPR022973 Ribosomal protein L10 N288_00685 abc65c18de68e2c7a1522a0a1ed8e219 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 12-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00685 abc65c18de68e2c7a1522a0a1ed8e219 166 SUPERFAMILY SSF160369 5 160 1.7E-56 T 12-10-2018 N288_00685 abc65c18de68e2c7a1522a0a1ed8e219 166 Gene3D G3DSA:3.30.70.1730 2 165 1.2E-44 T 12-10-2018 N288_21130 95a6851ecbcc4100e80cb7058a50f231 261 Gene3D G3DSA:3.40.50.300 4 253 8.4E-56 T 12-10-2018 N288_21130 95a6851ecbcc4100e80cb7058a50f231 261 Pfam PF00005 ABC transporter 21 173 2.8E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_21130 95a6851ecbcc4100e80cb7058a50f231 261 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_21130 95a6851ecbcc4100e80cb7058a50f231 261 SUPERFAMILY SSF52540 6 233 5.58E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_21130 95a6851ecbcc4100e80cb7058a50f231 261 SMART SM00382 30 225 4.5E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_21130 95a6851ecbcc4100e80cb7058a50f231 261 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 6 246 3.2E-114 T 12-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 N288_10260 8169fb7d4e65f2009c991be681cdbb9b 203 Pfam PF03458 UPF0126 domain 92 160 1.1E-17 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 N288_10260 8169fb7d4e65f2009c991be681cdbb9b 203 Pfam PF03458 UPF0126 domain 5 78 2.6E-19 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 N288_23385 8760784590e60d22b7b2e4dda26b94bb 369 SUPERFAMILY SSF53756 93 351 5.76E-10 T 12-10-2018 N288_23385 8760784590e60d22b7b2e4dda26b94bb 369 Pfam PF04230 Polysaccharide pyruvyl transferase 13 300 2.2E-65 T 12-10-2018 IPR007345 Polysaccharide pyruvyl transferase N288_23385 8760784590e60d22b7b2e4dda26b94bb 369 TIGRFAM TIGR03609 S_layer_CsaB: polysaccharide pyruvyl transferase CsaB 2 312 4.1E-71 T 12-10-2018 IPR019896 Polysaccharide pyruvyl transferase, CsaB N288_18725 5527746731f4d9c22e84840f2aef339a 138 Pfam PF03652 Holliday junction resolvase 1 136 8.4E-45 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 N288_18725 5527746731f4d9c22e84840f2aef339a 138 SMART SM00732 1 103 4.0E-42 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 N288_18725 5527746731f4d9c22e84840f2aef339a 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 135 7.3E-51 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 N288_18725 5527746731f4d9c22e84840f2aef339a 138 SUPERFAMILY SSF53098 1 137 1.02E-45 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily N288_18725 5527746731f4d9c22e84840f2aef339a 138 Gene3D G3DSA:3.30.420.140 1 138 1.6E-51 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 N288_18725 5527746731f4d9c22e84840f2aef339a 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 138 28.222 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 N288_17020 65d9282384487f15c8b0177661ed736d 363 Gene3D G3DSA:3.40.50.1970 2 171 2.3E-60 T 12-10-2018 N288_17020 65d9282384487f15c8b0177661ed736d 363 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 354 64.698 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 N288_17020 65d9282384487f15c8b0177661ed736d 363 Gene3D G3DSA:1.20.1090.10 172 358 2.8E-53 T 12-10-2018 N288_17020 65d9282384487f15c8b0177661ed736d 363 PIRSF PIRSF001455 5 363 1.9E-99 T 12-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 N288_17020 65d9282384487f15c8b0177661ed736d 363 Pfam PF01761 3-dehydroquinate synthase 68 323 9.4E-93 T 12-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 N288_17020 65d9282384487f15c8b0177661ed736d 363 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 351 2.9E-109 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 N288_17020 65d9282384487f15c8b0177661ed736d 363 SUPERFAMILY SSF56796 7 355 2.49E-100 T 12-10-2018 N288_01690 60c7e045015ff899a9da0f05d0c559e1 738 Pfam PF00586 AIR synthase related protein, N-terminal domain 445 562 2.2E-26 T 12-10-2018 IPR016188 PurM-like, N-terminal domain N288_01690 60c7e045015ff899a9da0f05d0c559e1 738 Pfam PF00586 AIR synthase related protein, N-terminal domain 92 194 1.0E-24 T 12-10-2018 IPR016188 PurM-like, N-terminal domain N288_01690 60c7e045015ff899a9da0f05d0c559e1 738 Gene3D G3DSA:3.90.650.10 34 362 4.9E-136 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily N288_01690 60c7e045015ff899a9da0f05d0c559e1 738 SUPERFAMILY SSF56042 205 430 1.5E-57 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily N288_01690 60c7e045015ff899a9da0f05d0c559e1 738 Gene3D G3DSA:3.30.1330.10 391 565 1.3E-62 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily N288_01690 60c7e045015ff899a9da0f05d0c559e1 738 Pfam PF02769 AIR synthase related protein, C-terminal domain 575 710 6.9E-13 T 12-10-2018 IPR010918 PurM-like, C-terminal domain N288_01690 60c7e045015ff899a9da0f05d0c559e1 738 Pfam PF02769 AIR synthase related protein, C-terminal domain 207 358 7.7E-34 T 12-10-2018 IPR010918 PurM-like, C-terminal domain N288_01690 60c7e045015ff899a9da0f05d0c559e1 738 SUPERFAMILY SSF55326 406 570 7.46E-59 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily N288_01690 60c7e045015ff899a9da0f05d0c559e1 738 Gene3D G3DSA:3.90.650.10 570 738 1.7E-38 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily N288_01690 60c7e045015ff899a9da0f05d0c559e1 738 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 23 736 0.0 T 12-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 N288_01690 60c7e045015ff899a9da0f05d0c559e1 738 SUPERFAMILY SSF55326 18 201 6.28E-53 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily N288_01690 60c7e045015ff899a9da0f05d0c559e1 738 PIRSF PIRSF001587 8 738 0.0 T 12-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 N288_01690 60c7e045015ff899a9da0f05d0c559e1 738 SUPERFAMILY SSF56042 572 737 1.5E-37 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily N288_01690 60c7e045015ff899a9da0f05d0c559e1 738 Gene3D G3DSA:3.30.1330.10 49 198 4.9E-136 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily N288_01690 60c7e045015ff899a9da0f05d0c559e1 738 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 738 334.952 T 12-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 N288_18595 0a9e640e43586be2a6dbc2a6e72dfbf9 180 SUPERFAMILY SSF56784 10 159 3.66E-26 T 12-10-2018 IPR036412 HAD-like superfamily N288_18595 0a9e640e43586be2a6dbc2a6e72dfbf9 180 Gene3D G3DSA:3.40.50.1000 21 161 2.9E-22 T 12-10-2018 IPR023214 HAD superfamily N288_18595 0a9e640e43586be2a6dbc2a6e72dfbf9 180 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 68 138 4.2E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_18595 0a9e640e43586be2a6dbc2a6e72dfbf9 180 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 37 147 3.3E-24 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 N288_18595 0a9e640e43586be2a6dbc2a6e72dfbf9 180 Pfam PF13419 Haloacid dehalogenase-like hydrolase 55 145 3.0E-11 T 12-10-2018 N288_18595 0a9e640e43586be2a6dbc2a6e72dfbf9 180 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 13 175 4.6E-60 T 12-10-2018 IPR010021 HAD-superfamily phosphatase, YqeG-like N288_25545 ccd75b4d2c704c35122ee48d506b14cc 573 Pfam PF06506 Propionate catabolism activator 36 198 6.0E-52 T 12-10-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 N288_25545 ccd75b4d2c704c35122ee48d506b14cc 573 SUPERFAMILY SSF159800 13 192 1.7E-50 T 12-10-2018 N288_25545 ccd75b4d2c704c35122ee48d506b14cc 573 Gene3D G3DSA:3.40.50.2300 15 191 9.0E-57 T 12-10-2018 N288_25545 ccd75b4d2c704c35122ee48d506b14cc 573 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 557 573 4.4E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 N288_25545 ccd75b4d2c704c35122ee48d506b14cc 573 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 540 557 4.4E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 N288_25545 ccd75b4d2c704c35122ee48d506b14cc 573 SUPERFAMILY SSF46689 485 572 4.21E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_25545 ccd75b4d2c704c35122ee48d506b14cc 573 Pfam PF02954 Bacterial regulatory protein, Fis family 533 572 3.5E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 N288_25545 ccd75b4d2c704c35122ee48d506b14cc 573 SUPERFAMILY SSF52540 326 512 1.52E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_25545 ccd75b4d2c704c35122ee48d506b14cc 573 Gene3D G3DSA:3.40.50.10660 87 176 9.0E-57 T 12-10-2018 N288_25545 ccd75b4d2c704c35122ee48d506b14cc 573 Gene3D G3DSA:1.10.8.60 440 506 2.3E-13 T 12-10-2018 N288_25545 ccd75b4d2c704c35122ee48d506b14cc 573 Pfam PF00158 Sigma-54 interaction domain 310 368 3.5E-4 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 N288_25545 ccd75b4d2c704c35122ee48d506b14cc 573 Gene3D G3DSA:1.10.10.60 507 573 1.9E-14 T 12-10-2018 N288_23025 5949608914494a3a08db5f50ba8e6685 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 299 5.2E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_23025 5949608914494a3a08db5f50ba8e6685 312 SUPERFAMILY SSF161098 71 296 4.19E-60 T 12-10-2018 IPR035906 MetI-like superfamily N288_23025 5949608914494a3a08db5f50ba8e6685 312 Gene3D G3DSA:1.10.3720.10 67 310 7.9E-70 T 12-10-2018 IPR035906 MetI-like superfamily N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 551 717 3.1E-49 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 193 398 9.7E-55 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 Pfam PF02355 Protein export membrane protein 549 729 5.5E-65 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 Pfam PF02355 Protein export membrane protein 242 405 2.4E-13 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 420 33.304 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 476 720 9.2E-68 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 447 731 26.522 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 Gene3D G3DSA:1.20.1640.10 425 472 3.7E-12 T 12-10-2018 N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 Pfam PF07549 SecD/SecF GG Motif 469 496 1.2E-5 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 SUPERFAMILY SSF82866 136 410 1.18E-37 T 12-10-2018 N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 SUPERFAMILY SSF82866 523 733 2.09E-38 T 12-10-2018 N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 Gene3D G3DSA:1.20.1640.10 249 421 3.7E-12 T 12-10-2018 N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 PRINTS PR01755 Bacterial translocase SecF protein signature 584 598 3.7E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 PRINTS PR01755 Bacterial translocase SecF protein signature 632 650 3.7E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 PRINTS PR01755 Bacterial translocase SecF protein signature 668 683 3.7E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 PRINTS PR01755 Bacterial translocase SecF protein signature 474 489 3.7E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 34 405 1.4E-110 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 Gene3D G3DSA:3.30.70.3400 34 122 4.9E-24 T 12-10-2018 N288_18860 2ef9ca6c9c53a153b95c20a74b316500 753 Gene3D G3DSA:1.20.1640.10 542 751 1.8E-11 T 12-10-2018 N288_08645 d312470d467fc2aebb1fa5db3555bcd8 404 Pfam PF00563 EAL domain 8 235 3.1E-34 T 12-10-2018 IPR001633 EAL domain N288_08645 d312470d467fc2aebb1fa5db3555bcd8 404 Gene3D G3DSA:3.20.20.450 1 228 3.4E-64 T 12-10-2018 IPR035919 EAL domain superfamily N288_08645 d312470d467fc2aebb1fa5db3555bcd8 404 SUPERFAMILY SSF103190 262 401 4.55E-42 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily N288_08645 d312470d467fc2aebb1fa5db3555bcd8 404 Pfam PF10388 EAL-domain associated signalling protein domain 240 404 9.8E-80 T 12-10-2018 IPR018842 YkuI, C-terminal N288_08645 d312470d467fc2aebb1fa5db3555bcd8 404 Gene3D G3DSA:3.30.450.20 290 404 2.7E-45 T 12-10-2018 N288_08645 d312470d467fc2aebb1fa5db3555bcd8 404 SMART SM00052 2 240 6.8E-15 T 12-10-2018 IPR001633 EAL domain N288_08645 d312470d467fc2aebb1fa5db3555bcd8 404 Gene3D G3DSA:1.20.5.170 245 289 8.0E-10 T 12-10-2018 N288_08645 d312470d467fc2aebb1fa5db3555bcd8 404 SUPERFAMILY SSF141868 2 257 1.44E-45 T 12-10-2018 IPR035919 EAL domain superfamily N288_01360 59023195c4dee0a5dd0aba230fce3712 195 SUPERFAMILY SSF48498 76 190 6.67E-10 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily N288_01360 59023195c4dee0a5dd0aba230fce3712 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 51 1.9E-17 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_01360 59023195c4dee0a5dd0aba230fce3712 195 Gene3D G3DSA:1.10.10.60 2 50 6.5E-19 T 12-10-2018 N288_01360 59023195c4dee0a5dd0aba230fce3712 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 50 4.9E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_01360 59023195c4dee0a5dd0aba230fce3712 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 6 19 4.9E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_01360 59023195c4dee0a5dd0aba230fce3712 195 Gene3D G3DSA:1.10.357.10 51 189 1.1E-41 T 12-10-2018 N288_01360 59023195c4dee0a5dd0aba230fce3712 195 SUPERFAMILY SSF46689 2 71 1.9E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_13855 a65772440ae565fc5dd668b4591d6059 183 Pfam PF12867 DinB superfamily 12 149 5.6E-13 T 12-10-2018 IPR024775 DinB-like domain N288_13855 a65772440ae565fc5dd668b4591d6059 183 SUPERFAMILY SSF109854 3 153 1.23E-25 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_13855 a65772440ae565fc5dd668b4591d6059 183 Gene3D G3DSA:1.20.120.450 1 170 8.4E-42 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_02705 a713d7e704b8b47be33c46a0ddf3ebf3 123 Pfam PF01638 HxlR-like helix-turn-helix 16 104 4.9E-40 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type N288_02705 a713d7e704b8b47be33c46a0ddf3ebf3 123 SUPERFAMILY SSF46785 3 108 2.44E-34 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_02705 a713d7e704b8b47be33c46a0ddf3ebf3 123 Gene3D G3DSA:1.10.10.10 2 109 1.1E-39 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_05065 16a11930da86c0aa28fe2065fe853bf8 486 SUPERFAMILY SSF53474 3 481 3.04E-131 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_05065 16a11930da86c0aa28fe2065fe853bf8 486 PRINTS PR00878 Cholinesterase signature 104 133 9.1E-7 T 12-10-2018 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 N288_05065 16a11930da86c0aa28fe2065fe853bf8 486 PRINTS PR00878 Cholinesterase signature 397 409 9.1E-7 T 12-10-2018 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 N288_05065 16a11930da86c0aa28fe2065fe853bf8 486 Gene3D G3DSA:3.40.50.1820 2 485 7.4E-164 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_05065 16a11930da86c0aa28fe2065fe853bf8 486 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 80 90 - T 12-10-2018 IPR019819 Carboxylesterase type B, conserved site N288_05065 16a11930da86c0aa28fe2065fe853bf8 486 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 176 191 - T 12-10-2018 IPR019826 Carboxylesterase type B, active site N288_05065 16a11930da86c0aa28fe2065fe853bf8 486 Pfam PF00135 Carboxylesterase family 3 478 1.1E-121 T 12-10-2018 IPR002018 Carboxylesterase, type B N288_01060 221f7e1db1e7ce3f5aa29dac0eec4eea 449 Gene3D G3DSA:3.30.310.50 370 448 4.2E-29 T 12-10-2018 N288_01060 221f7e1db1e7ce3f5aa29dac0eec4eea 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 253 6.1E-15 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_01060 221f7e1db1e7ce3f5aa29dac0eec4eea 449 Gene3D G3DSA:3.40.120.10 256 339 3.9E-73 T 12-10-2018 N288_01060 221f7e1db1e7ce3f5aa29dac0eec4eea 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 1.9E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_01060 221f7e1db1e7ce3f5aa29dac0eec4eea 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 1.9E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_01060 221f7e1db1e7ce3f5aa29dac0eec4eea 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 1.9E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_01060 221f7e1db1e7ce3f5aa29dac0eec4eea 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 368 2.6E-37 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_01060 221f7e1db1e7ce3f5aa29dac0eec4eea 449 SUPERFAMILY SSF55957 357 446 3.4E-27 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_01060 221f7e1db1e7ce3f5aa29dac0eec4eea 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 7.0E-18 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_01060 221f7e1db1e7ce3f5aa29dac0eec4eea 449 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 442 3.8E-187 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_01060 221f7e1db1e7ce3f5aa29dac0eec4eea 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_01060 221f7e1db1e7ce3f5aa29dac0eec4eea 449 SUPERFAMILY SSF53738 3 180 5.49E-46 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_01060 221f7e1db1e7ce3f5aa29dac0eec4eea 449 Gene3D G3DSA:3.40.120.10 3 155 3.2E-58 T 12-10-2018 N288_01060 221f7e1db1e7ce3f5aa29dac0eec4eea 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 135 4.9E-42 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_01060 221f7e1db1e7ce3f5aa29dac0eec4eea 449 SUPERFAMILY SSF53738 257 366 7.85E-34 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_01060 221f7e1db1e7ce3f5aa29dac0eec4eea 449 Gene3D G3DSA:3.40.120.10 174 362 3.9E-73 T 12-10-2018 N288_01060 221f7e1db1e7ce3f5aa29dac0eec4eea 449 SUPERFAMILY SSF53738 158 256 2.9E-25 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_01060 221f7e1db1e7ce3f5aa29dac0eec4eea 449 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 444 45.139 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_02330 5e12715c2fe74b03b389ef8edc7d813c 295 SUPERFAMILY SSF54106 36 80 3.4E-10 T 12-10-2018 N288_02330 5e12715c2fe74b03b389ef8edc7d813c 295 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 111 263 1.3E-10 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 N288_02330 5e12715c2fe74b03b389ef8edc7d813c 295 Gene3D G3DSA:3.40.80.10 90 274 4.2E-23 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 N288_02330 5e12715c2fe74b03b389ef8edc7d813c 295 SUPERFAMILY SSF55846 99 280 2.88E-30 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 N288_02330 5e12715c2fe74b03b389ef8edc7d813c 295 SUPERFAMILY SSF54106 1 35 2.35E-5 T 12-10-2018 N288_02330 5e12715c2fe74b03b389ef8edc7d813c 295 Gene3D G3DSA:3.10.350.10 36 86 2.2E-14 T 12-10-2018 IPR036779 LysM domain superfamily N288_02330 5e12715c2fe74b03b389ef8edc7d813c 295 Pfam PF01476 LysM domain 1 35 9.9E-7 T 12-10-2018 IPR018392 LysM domain N288_02330 5e12715c2fe74b03b389ef8edc7d813c 295 Pfam PF01476 LysM domain 38 80 7.8E-13 T 12-10-2018 IPR018392 LysM domain N288_02330 5e12715c2fe74b03b389ef8edc7d813c 295 Gene3D G3DSA:3.10.350.10 1 35 4.1E-9 T 12-10-2018 IPR036779 LysM domain superfamily N288_02330 5e12715c2fe74b03b389ef8edc7d813c 295 SMART SM00257 1 35 0.038 T 12-10-2018 IPR018392 LysM domain N288_02330 5e12715c2fe74b03b389ef8edc7d813c 295 SMART SM00257 37 80 6.2E-13 T 12-10-2018 IPR018392 LysM domain N288_09235 f1067a5d17df8790a2b4962251180e8f 426 Hamap MF_02033 Cell division protein FtsA [ftsA]. 3 425 31.048 T 12-10-2018 IPR020823 Cell division protein FtsA N288_09235 f1067a5d17df8790a2b4962251180e8f 426 Pfam PF02491 SHS2 domain inserted in FTSA 81 160 1.5E-27 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 N288_09235 f1067a5d17df8790a2b4962251180e8f 426 SUPERFAMILY SSF53067 197 368 6.98E-42 T 12-10-2018 N288_09235 f1067a5d17df8790a2b4962251180e8f 426 Gene3D G3DSA:3.90.640.10 233 298 2.2E-113 T 12-10-2018 N288_09235 f1067a5d17df8790a2b4962251180e8f 426 Gene3D G3DSA:3.30.420.40 10 364 2.2E-113 T 12-10-2018 N288_09235 f1067a5d17df8790a2b4962251180e8f 426 Gene3D G3DSA:3.30.420.40 195 349 2.2E-113 T 12-10-2018 N288_09235 f1067a5d17df8790a2b4962251180e8f 426 SUPERFAMILY SSF53067 6 193 3.28E-59 T 12-10-2018 N288_09235 f1067a5d17df8790a2b4962251180e8f 426 Pfam PF14450 Cell division protein FtsA 205 366 1.0E-23 T 12-10-2018 N288_09235 f1067a5d17df8790a2b4962251180e8f 426 Pfam PF14450 Cell division protein FtsA 9 187 1.5E-9 T 12-10-2018 N288_09235 f1067a5d17df8790a2b4962251180e8f 426 SMART SM00842 7 194 4.5E-95 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 N288_09235 f1067a5d17df8790a2b4962251180e8f 426 PIRSF PIRSF003101 1 425 1.7E-149 T 12-10-2018 IPR020823 Cell division protein FtsA N288_09235 f1067a5d17df8790a2b4962251180e8f 426 Gene3D G3DSA:3.30.1490.110 83 167 2.2E-113 T 12-10-2018 N288_09235 f1067a5d17df8790a2b4962251180e8f 426 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 7 369 2.1E-127 T 12-10-2018 IPR020823 Cell division protein FtsA N288_15620 e9bbaeab72dba30d09531f69678aa0af 341 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 61 8.1E-16 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 N288_15620 e9bbaeab72dba30d09531f69678aa0af 341 Gene3D G3DSA:3.40.1030.10 72 314 1.8E-119 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 N288_15620 e9bbaeab72dba30d09531f69678aa0af 341 Pfam PF00591 Glycosyl transferase family, a/b domain 74 323 7.4E-90 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 N288_15620 e9bbaeab72dba30d09531f69678aa0af 341 SUPERFAMILY SSF47648 1 67 1.31E-14 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 N288_15620 e9bbaeab72dba30d09531f69678aa0af 341 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 331 3.2E-114 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 N288_15620 e9bbaeab72dba30d09531f69678aa0af 341 SUPERFAMILY SSF52418 72 335 3.14E-88 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 N288_15620 e9bbaeab72dba30d09531f69678aa0af 341 Gene3D G3DSA:1.20.970.10 5 182 1.8E-119 T 12-10-2018 N288_15620 e9bbaeab72dba30d09531f69678aa0af 341 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 332 36.867 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 N288_19105 58ead4f941308594c49b6ff2717dcaa1 346 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 7 339 4.1E-146 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 N288_19105 58ead4f941308594c49b6ff2717dcaa1 346 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 195 209 - T 12-10-2018 IPR001482 Type II/IV secretion system protein N288_19105 58ead4f941308594c49b6ff2717dcaa1 346 Gene3D G3DSA:3.30.450.90 1 101 7.9E-32 T 12-10-2018 N288_19105 58ead4f941308594c49b6ff2717dcaa1 346 Gene3D G3DSA:3.40.50.300 103 345 7.2E-97 T 12-10-2018 N288_19105 58ead4f941308594c49b6ff2717dcaa1 346 Pfam PF00437 Type II/IV secretion system protein 119 263 5.0E-41 T 12-10-2018 IPR001482 Type II/IV secretion system protein N288_19105 58ead4f941308594c49b6ff2717dcaa1 346 SMART SM00382 124 249 0.0018 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_19105 58ead4f941308594c49b6ff2717dcaa1 346 SUPERFAMILY SSF52540 5 338 1.7E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00915 a9d30f73e4b213e1b44f5be086789fa1 144 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 141 4.4E-66 T 12-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00915 a9d30f73e4b213e1b44f5be086789fa1 144 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 143 28.764 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 N288_00915 a9d30f73e4b213e1b44f5be086789fa1 144 PIRSF PIRSF002181 1 142 1.1E-51 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 N288_00915 a9d30f73e4b213e1b44f5be086789fa1 144 SUPERFAMILY SSF52161 1 139 3.66E-61 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 N288_00915 a9d30f73e4b213e1b44f5be086789fa1 144 Pfam PF00572 Ribosomal protein L13 14 138 1.3E-58 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 N288_00915 a9d30f73e4b213e1b44f5be086789fa1 144 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 12-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 N288_00915 a9d30f73e4b213e1b44f5be086789fa1 144 Gene3D G3DSA:3.90.1180.10 1 142 1.2E-63 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 N288_01200 8e02a35e8f6fb5b822623a81f37d76cb 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 162 1.3E-22 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_01200 8e02a35e8f6fb5b822623a81f37d76cb 171 Pfam PF04542 Sigma-70 region 2 20 86 4.3E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_01200 8e02a35e8f6fb5b822623a81f37d76cb 171 SUPERFAMILY SSF88659 103 163 1.12E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_01200 8e02a35e8f6fb5b822623a81f37d76cb 171 Gene3D G3DSA:1.10.10.10 111 164 1.3E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_01200 8e02a35e8f6fb5b822623a81f37d76cb 171 Gene3D G3DSA:1.10.1740.10 2 110 4.0E-21 T 12-10-2018 N288_01200 8e02a35e8f6fb5b822623a81f37d76cb 171 Pfam PF08281 Sigma-70, region 4 107 158 1.5E-12 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_01200 8e02a35e8f6fb5b822623a81f37d76cb 171 SUPERFAMILY SSF88946 2 90 1.37E-20 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_11295 cb046cebbf9769fd25df4a15aba80947 400 Pfam PF00108 Thiolase, N-terminal domain 5 267 2.8E-79 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 N288_11295 cb046cebbf9769fd25df4a15aba80947 400 SUPERFAMILY SSF53901 277 397 8.22E-45 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_11295 cb046cebbf9769fd25df4a15aba80947 400 PIRSF PIRSF000429 1 399 6.1E-141 T 12-10-2018 IPR002155 Thiolase GO:0016747 N288_11295 cb046cebbf9769fd25df4a15aba80947 400 ProSitePatterns PS00737 Thiolases signature 2. 344 360 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 N288_11295 cb046cebbf9769fd25df4a15aba80947 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 N288_11295 cb046cebbf9769fd25df4a15aba80947 400 Gene3D G3DSA:3.40.47.10 6 281 4.7E-159 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_11295 cb046cebbf9769fd25df4a15aba80947 400 Gene3D G3DSA:3.40.47.10 142 395 4.7E-159 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_11295 cb046cebbf9769fd25df4a15aba80947 400 Pfam PF02803 Thiolase, C-terminal domain 276 397 2.8E-48 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 N288_11295 cb046cebbf9769fd25df4a15aba80947 400 SUPERFAMILY SSF53901 3 275 2.16E-79 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_11295 cb046cebbf9769fd25df4a15aba80947 400 ProSitePatterns PS00099 Thiolases active site. 379 392 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 N288_11295 cb046cebbf9769fd25df4a15aba80947 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 396 7.6E-145 T 12-10-2018 IPR002155 Thiolase GO:0016747 N288_05700 b2ed112413d35cee72243679f6690f97 328 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_05700 b2ed112413d35cee72243679f6690f97 328 Pfam PF00005 ABC transporter 33 183 1.8E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_05700 b2ed112413d35cee72243679f6690f97 328 Gene3D G3DSA:3.40.50.300 3 328 1.2E-105 T 12-10-2018 N288_05700 b2ed112413d35cee72243679f6690f97 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 300 1.8E-16 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_05700 b2ed112413d35cee72243679f6690f97 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 6.3E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_05700 b2ed112413d35cee72243679f6690f97 328 SMART SM00382 41 233 5.8E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_05700 b2ed112413d35cee72243679f6690f97 328 SUPERFAMILY SSF52540 5 254 9.91E-79 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_06415 b0c71c530b42256c576ecf36aae4ee1a 286 PIRSF PIRSF035875 1 284 2.0E-85 T 12-10-2018 IPR017039 Virulence factor BrkB N288_06415 b0c71c530b42256c576ecf36aae4ee1a 286 Pfam PF03631 Virulence factor BrkB 17 269 7.1E-72 T 12-10-2018 IPR017039 Virulence factor BrkB N288_06415 b0c71c530b42256c576ecf36aae4ee1a 286 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 6 267 1.4E-50 T 12-10-2018 IPR017039 Virulence factor BrkB N288_16535 ef610e0f392e8151990c22504de70fcc 437 SUPERFAMILY SSF81345 16 273 8.5E-26 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_16535 ef610e0f392e8151990c22504de70fcc 437 Gene3D G3DSA:1.10.3470.10 41 281 2.2E-5 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_16535 ef610e0f392e8151990c22504de70fcc 437 Pfam PF00950 ABC 3 transport family 13 274 1.3E-69 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 N288_16535 ef610e0f392e8151990c22504de70fcc 437 Gene3D G3DSA:1.10.10.10 295 432 1.9E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_09240 ff9683324259d51affcb2eab0cf1c9b2 388 PRINTS PR00423 Cell division protein FtsZ signature 126 147 3.0E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 N288_09240 ff9683324259d51affcb2eab0cf1c9b2 388 PRINTS PR00423 Cell division protein FtsZ signature 189 211 3.0E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 N288_09240 ff9683324259d51affcb2eab0cf1c9b2 388 PRINTS PR00423 Cell division protein FtsZ signature 98 118 3.0E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 N288_09240 ff9683324259d51affcb2eab0cf1c9b2 388 PRINTS PR00423 Cell division protein FtsZ signature 212 233 3.0E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 N288_09240 ff9683324259d51affcb2eab0cf1c9b2 388 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 N288_09240 ff9683324259d51affcb2eab0cf1c9b2 388 SMART SM00865 207 324 3.0E-54 T 12-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 N288_09240 ff9683324259d51affcb2eab0cf1c9b2 388 SMART SM00864 13 205 7.9E-117 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 N288_09240 ff9683324259d51affcb2eab0cf1c9b2 388 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 375 39.583 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 N288_09240 ff9683324259d51affcb2eab0cf1c9b2 388 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 6 324 8.2E-141 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 N288_09240 ff9683324259d51affcb2eab0cf1c9b2 388 Pfam PF12327 FtsZ family, C-terminal domain 222 315 6.0E-33 T 12-10-2018 IPR024757 Cell division protein FtsZ, C-terminal N288_09240 ff9683324259d51affcb2eab0cf1c9b2 388 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 7.3E-45 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 N288_09240 ff9683324259d51affcb2eab0cf1c9b2 388 SUPERFAMILY SSF55307 204 319 6.64E-44 T 12-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 N288_09240 ff9683324259d51affcb2eab0cf1c9b2 388 Gene3D G3DSA:3.30.1330.20 221 326 4.8E-42 T 12-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 N288_09240 ff9683324259d51affcb2eab0cf1c9b2 388 SUPERFAMILY SSF52490 12 208 3.79E-72 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 N288_09240 ff9683324259d51affcb2eab0cf1c9b2 388 Gene3D G3DSA:3.40.50.1440 5 220 1.9E-84 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 N288_09240 ff9683324259d51affcb2eab0cf1c9b2 388 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 N288_02875 5e22d13f67912b6c01e78aedf253681b 465 PIRSF PIRSF036492 2 465 4.9E-159 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 N288_02875 5e22d13f67912b6c01e78aedf253681b 465 Gene3D G3DSA:3.40.309.10 218 413 2.1E-149 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 N288_02875 5e22d13f67912b6c01e78aedf253681b 465 Pfam PF00171 Aldehyde dehydrogenase family 27 432 1.5E-88 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 N288_02875 5e22d13f67912b6c01e78aedf253681b 465 SUPERFAMILY SSF53720 14 440 1.83E-112 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 N288_02875 5e22d13f67912b6c01e78aedf253681b 465 Gene3D G3DSA:3.40.605.10 23 432 2.1E-149 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 N288_02875 5e22d13f67912b6c01e78aedf253681b 465 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 242 253 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 N288_02875 5e22d13f67912b6c01e78aedf253681b 465 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 214 221 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 N288_20270 0754ccb5a22ae1f85dd240ffb1272517 529 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 2 526 6.1E-246 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 N288_20270 0754ccb5a22ae1f85dd240ffb1272517 529 SUPERFAMILY SSF53795 213 522 2.75E-136 T 12-10-2018 N288_20270 0754ccb5a22ae1f85dd240ffb1272517 529 Gene3D G3DSA:2.170.8.10 38 330 5.2E-225 T 12-10-2018 N288_20270 0754ccb5a22ae1f85dd240ffb1272517 529 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 12 527 55.517 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 N288_20270 0754ccb5a22ae1f85dd240ffb1272517 529 Gene3D G3DSA:3.40.449.10 28 213 5.2E-225 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 N288_20270 0754ccb5a22ae1f85dd240ffb1272517 529 Gene3D G3DSA:3.90.228.20 214 513 5.2E-225 T 12-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 N288_20270 0754ccb5a22ae1f85dd240ffb1272517 529 Pfam PF01293 Phosphoenolpyruvate carboxykinase 18 480 1.4E-226 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 N288_20270 0754ccb5a22ae1f85dd240ffb1272517 529 PIRSF PIRSF006294 2 527 3.9E-242 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 N288_20270 0754ccb5a22ae1f85dd240ffb1272517 529 SUPERFAMILY SSF68923 14 212 2.09E-79 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 N288_13380 af007d8942b90af6335f543d1bb4c27f 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 170 189 2.4E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13380 af007d8942b90af6335f543d1bb4c27f 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 158 2.4E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13380 af007d8942b90af6335f543d1bb4c27f 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 2.4E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13380 af007d8942b90af6335f543d1bb4c27f 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 1.0E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13380 af007d8942b90af6335f543d1bb4c27f 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 96 107 1.0E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13380 af007d8942b90af6335f543d1bb4c27f 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 21 38 1.0E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13380 af007d8942b90af6335f543d1bb4c27f 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 208 1.0E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13380 af007d8942b90af6335f543d1bb4c27f 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 189 1.0E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13380 af007d8942b90af6335f543d1bb4c27f 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 160 1.0E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13380 af007d8942b90af6335f543d1bb4c27f 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 157 185 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_13380 af007d8942b90af6335f543d1bb4c27f 273 Gene3D G3DSA:3.40.50.720 6 273 2.5E-88 T 12-10-2018 N288_13380 af007d8942b90af6335f543d1bb4c27f 273 SUPERFAMILY SSF51735 18 264 1.21E-85 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_13380 af007d8942b90af6335f543d1bb4c27f 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 29 263 1.7E-66 T 12-10-2018 N288_17365 9e62fd77376baa6dd670516e2fa13156 195 SUPERFAMILY SSF46785 2 82 5.71E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_17365 9e62fd77376baa6dd670516e2fa13156 195 Hamap MF_01804 Segregation and condensation protein B [scpB]. 4 185 36.139 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 N288_17365 9e62fd77376baa6dd670516e2fa13156 195 Gene3D G3DSA:1.10.10.10 85 180 1.6E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_17365 9e62fd77376baa6dd670516e2fa13156 195 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 5 193 1.9E-57 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 N288_17365 9e62fd77376baa6dd670516e2fa13156 195 SUPERFAMILY SSF46785 89 160 6.29E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_17365 9e62fd77376baa6dd670516e2fa13156 195 PIRSF PIRSF019345 2 192 1.4E-53 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 N288_17365 9e62fd77376baa6dd670516e2fa13156 195 Gene3D G3DSA:1.10.10.10 2 84 4.2E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_17365 9e62fd77376baa6dd670516e2fa13156 195 Pfam PF04079 Segregation and condensation complex subunit ScpB 9 169 7.7E-56 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 N288_17245 4d2e8f5bd83fa2c09364f63f28c07d6d 174 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 7 172 5.8E-51 T 12-10-2018 IPR006286 Deglycase PfpI N288_17245 4d2e8f5bd83fa2c09364f63f28c07d6d 174 SUPERFAMILY SSF52317 5 173 7.55E-46 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_17245 4d2e8f5bd83fa2c09364f63f28c07d6d 174 Gene3D G3DSA:3.40.50.880 2 174 1.3E-49 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_17245 4d2e8f5bd83fa2c09364f63f28c07d6d 174 Pfam PF01965 DJ-1/PfpI family 6 169 3.2E-45 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 N288_09165 62815a44102b3f10eb9cd7e0e699b444 638 SUPERFAMILY SSF54184 583 636 7.98E-9 T 12-10-2018 N288_09165 62815a44102b3f10eb9cd7e0e699b444 638 Pfam PF03717 Penicillin-binding Protein dimerisation domain 56 201 6.0E-25 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 N288_09165 62815a44102b3f10eb9cd7e0e699b444 638 SUPERFAMILY SSF56519 53 219 6.67E-46 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 N288_09165 62815a44102b3f10eb9cd7e0e699b444 638 Gene3D G3DSA:3.90.1310.30 49 219 8.9E-48 T 12-10-2018 N288_09165 62815a44102b3f10eb9cd7e0e699b444 638 Pfam PF03793 PASTA domain 583 635 7.1E-8 T 12-10-2018 IPR005543 PASTA domain N288_09165 62815a44102b3f10eb9cd7e0e699b444 638 SUPERFAMILY SSF56601 170 567 3.24E-99 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_09165 62815a44102b3f10eb9cd7e0e699b444 638 Gene3D G3DSA:3.30.450.330 221 560 8.7E-113 T 12-10-2018 N288_09165 62815a44102b3f10eb9cd7e0e699b444 638 Pfam PF00905 Penicillin binding protein transpeptidase domain 246 555 3.5E-85 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 N288_09165 62815a44102b3f10eb9cd7e0e699b444 638 SMART SM00740 579 637 2.5E-8 T 12-10-2018 IPR005543 PASTA domain N288_09165 62815a44102b3f10eb9cd7e0e699b444 638 Gene3D G3DSA:3.40.710.10 282 477 8.7E-113 T 12-10-2018 N288_09165 62815a44102b3f10eb9cd7e0e699b444 638 TIGRFAM TIGR02214 spoVD_pbp: stage V sporulation protein D 11 636 9.0E-262 T 12-10-2018 IPR011927 Stage V sporulation protein D N288_24830 0b08897f49c53a6906621991c760cb6a 139 Pfam PF00582 Universal stress protein family 1 139 3.1E-35 T 12-10-2018 IPR006016 UspA N288_24830 0b08897f49c53a6906621991c760cb6a 139 Gene3D G3DSA:3.40.50.620 1 139 5.7E-40 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_24830 0b08897f49c53a6906621991c760cb6a 139 PRINTS PR01438 Universal stress protein signature 117 139 1.1E-23 T 12-10-2018 IPR006015 Universal stress protein A N288_24830 0b08897f49c53a6906621991c760cb6a 139 PRINTS PR01438 Universal stress protein signature 99 111 1.1E-23 T 12-10-2018 IPR006015 Universal stress protein A N288_24830 0b08897f49c53a6906621991c760cb6a 139 PRINTS PR01438 Universal stress protein signature 2 20 1.1E-23 T 12-10-2018 IPR006015 Universal stress protein A N288_24830 0b08897f49c53a6906621991c760cb6a 139 SUPERFAMILY SSF52402 2 139 8.2E-35 T 12-10-2018 N288_18445 006b7008217ee2310d45001d7d908d4a 147 SUPERFAMILY SSF89095 1 147 3.19E-44 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 N288_18445 006b7008217ee2310d45001d7d908d4a 147 Gene3D G3DSA:1.10.1510.10 1 90 6.0E-29 T 12-10-2018 N288_18445 006b7008217ee2310d45001d7d908d4a 147 Gene3D G3DSA:1.10.10.410 91 147 5.0E-27 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal N288_18445 006b7008217ee2310d45001d7d908d4a 147 Pfam PF09424 Yqey-like protein 5 146 5.9E-55 T 12-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 N288_09575 3b81860aa6aa67f44e550e34e5dc8e3d 90 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 2.4E-35 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09575 3b81860aa6aa67f44e550e34e5dc8e3d 90 Pfam PF00886 Ribosomal protein S16 9 67 1.2E-25 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09575 3b81860aa6aa67f44e550e34e5dc8e3d 90 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 24.764 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09575 3b81860aa6aa67f44e550e34e5dc8e3d 90 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 12-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_09575 3b81860aa6aa67f44e550e34e5dc8e3d 90 Gene3D G3DSA:3.30.1320.10 1 90 2.8E-37 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09575 3b81860aa6aa67f44e550e34e5dc8e3d 90 SUPERFAMILY SSF54565 2 86 2.62E-34 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_25475 2478fc35f5513ce99ca20ed2c8400ebf 470 Gene3D G3DSA:3.40.50.410 247 421 4.8E-11 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_25475 2478fc35f5513ce99ca20ed2c8400ebf 470 Pfam PF10138 vWA found in TerF C terminus 247 468 6.9E-57 T 12-10-2018 IPR019303 vWA found in TerF C terminus N288_25475 2478fc35f5513ce99ca20ed2c8400ebf 470 SMART SM00327 246 441 3.9E-5 T 12-10-2018 IPR002035 von Willebrand factor, type A N288_25475 2478fc35f5513ce99ca20ed2c8400ebf 470 SUPERFAMILY SSF53300 248 396 4.26E-15 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_25475 2478fc35f5513ce99ca20ed2c8400ebf 470 Gene3D G3DSA:2.60.60.30 18 165 4.9E-24 T 12-10-2018 N288_25475 2478fc35f5513ce99ca20ed2c8400ebf 470 Pfam PF02342 TerD domain 5 167 7.8E-25 T 12-10-2018 IPR003325 TerD domain N288_17300 163519dff45cf28d954ec7968df8e39f 238 SMART SM00448 5 115 3.7E-48 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_17300 163519dff45cf28d954ec7968df8e39f 238 SMART SM00862 156 233 5.8E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_17300 163519dff45cf28d954ec7968df8e39f 238 SUPERFAMILY SSF52172 5 191 2.56E-44 T 12-10-2018 IPR011006 CheY-like superfamily N288_17300 163519dff45cf28d954ec7968df8e39f 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 233 2.2E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_17300 163519dff45cf28d954ec7968df8e39f 238 Pfam PF00072 Response regulator receiver domain 7 115 5.7E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_17300 163519dff45cf28d954ec7968df8e39f 238 Gene3D G3DSA:1.10.10.10 139 238 2.0E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_17300 163519dff45cf28d954ec7968df8e39f 238 Gene3D G3DSA:3.40.50.2300 1 138 2.1E-41 T 12-10-2018 N288_15040 7f0ffaa3425810f9efffcbe3d161e197 163 SUPERFAMILY SSF55729 1 161 3.32E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_15040 7f0ffaa3425810f9efffcbe3d161e197 163 Gene3D G3DSA:3.40.630.30 1 163 4.2E-50 T 12-10-2018 N288_15040 7f0ffaa3425810f9efffcbe3d161e197 163 Pfam PF13420 Acetyltransferase (GNAT) domain 3 154 7.7E-26 T 12-10-2018 N288_06750 e44f79e46343a6b4a5cbc5944c97728d 587 Gene3D G3DSA:3.20.20.540 174 487 1.1E-156 T 12-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 N288_06750 e44f79e46343a6b4a5cbc5944c97728d 587 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 130 556 99.667 T 12-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 N288_06750 e44f79e46343a6b4a5cbc5944c97728d 587 Pfam PF13667 ThiC-associated domain 12 88 9.5E-30 T 12-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 N288_06750 e44f79e46343a6b4a5cbc5944c97728d 587 Pfam PF01964 Radical SAM ThiC family 131 551 2.0E-206 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 N288_06750 e44f79e46343a6b4a5cbc5944c97728d 587 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 130 554 2.9E-224 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 N288_00140 60ada00c49b240881fcedbe2a2ac34eb 564 Gene3D G3DSA:1.10.8.60 8 237 3.3E-106 T 12-10-2018 N288_00140 60ada00c49b240881fcedbe2a2ac34eb 564 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 361 1.6E-14 T 12-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 N288_00140 60ada00c49b240881fcedbe2a2ac34eb 564 Gene3D G3DSA:1.20.272.10 242 362 2.5E-8 T 12-10-2018 N288_00140 60ada00c49b240881fcedbe2a2ac34eb 564 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 358 1.6E-144 T 12-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 N288_00140 60ada00c49b240881fcedbe2a2ac34eb 564 Gene3D G3DSA:3.40.50.300 13 177 3.3E-106 T 12-10-2018 N288_00140 60ada00c49b240881fcedbe2a2ac34eb 564 SUPERFAMILY SSF52540 31 223 3.74E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00140 60ada00c49b240881fcedbe2a2ac34eb 564 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.1E-44 T 12-10-2018 N288_00140 60ada00c49b240881fcedbe2a2ac34eb 564 SUPERFAMILY SSF48019 244 361 2.89E-26 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 N288_00140 60ada00c49b240881fcedbe2a2ac34eb 564 SMART SM00382 37 179 1.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_00140 60ada00c49b240881fcedbe2a2ac34eb 564 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 9.6E-6 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 N288_00140 60ada00c49b240881fcedbe2a2ac34eb 564 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 9.6E-6 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 N288_15400 55c0376a3d29a6662437d6471db8f944 539 PIRSF PIRSF002741 1 535 1.3E-122 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 N288_15400 55c0376a3d29a6662437d6471db8f944 539 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 86 108 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site N288_15400 55c0376a3d29a6662437d6471db8f944 539 Gene3D G3DSA:3.10.105.10 293 510 2.1E-177 T 12-10-2018 N288_15400 55c0376a3d29a6662437d6471db8f944 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 460 2.0E-87 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain N288_15400 55c0376a3d29a6662437d6471db8f944 539 Gene3D G3DSA:3.40.190.10 49 523 2.1E-177 T 12-10-2018 N288_15400 55c0376a3d29a6662437d6471db8f944 539 Gene3D G3DSA:3.90.76.10 70 192 2.1E-177 T 12-10-2018 N288_15400 55c0376a3d29a6662437d6471db8f944 539 SUPERFAMILY SSF53850 38 528 2.39E-139 T 12-10-2018 N288_16670 64f65deacf79e8f725b70992e523af3e 345 PIRSF PIRSF004776 1 345 2.8E-78 T 12-10-2018 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 N288_16670 64f65deacf79e8f725b70992e523af3e 345 Pfam PF13521 AAA domain 171 330 1.2E-30 T 12-10-2018 IPR038727 NadR/Ttd14, AAA domain N288_16670 64f65deacf79e8f725b70992e523af3e 345 SUPERFAMILY SSF52540 167 332 3.43E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_16670 64f65deacf79e8f725b70992e523af3e 345 Gene3D G3DSA:3.40.50.620 3 168 1.0E-32 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_16670 64f65deacf79e8f725b70992e523af3e 345 SUPERFAMILY SSF52374 6 168 1.06E-13 T 12-10-2018 N288_16670 64f65deacf79e8f725b70992e523af3e 345 Gene3D G3DSA:3.40.50.300 169 335 6.9E-52 T 12-10-2018 N288_18995 2e6454d7a9494e3d214301324c690e6e 110 SUPERFAMILY SSF118010 1 109 9.03E-33 T 12-10-2018 IPR036764 Cysteine protease Prp superfamily N288_18995 2e6454d7a9494e3d214301324c690e6e 110 Pfam PF04327 Cysteine protease Prp 1 105 5.1E-27 T 12-10-2018 IPR007422 Cysteine protease Prp N288_18995 2e6454d7a9494e3d214301324c690e6e 110 Gene3D G3DSA:3.30.70.1490 1 110 1.8E-36 T 12-10-2018 IPR036764 Cysteine protease Prp superfamily N288_15705 ab641a059d8f35d8be817bc71dcd4d92 743 Gene3D G3DSA:3.20.70.20 64 737 4.1E-207 T 12-10-2018 N288_15705 ab641a059d8f35d8be817bc71dcd4d92 743 SUPERFAMILY SSF51998 213 742 1.28E-169 T 12-10-2018 N288_15705 ab641a059d8f35d8be817bc71dcd4d92 743 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 134 209 3.4E-18 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_15705 ab641a059d8f35d8be817bc71dcd4d92 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 430 441 2.2E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_15705 ab641a059d8f35d8be817bc71dcd4d92 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 481 504 2.2E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_15705 ab641a059d8f35d8be817bc71dcd4d92 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 519 541 2.2E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_15705 ab641a059d8f35d8be817bc71dcd4d92 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 612 639 2.2E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_15705 ab641a059d8f35d8be817bc71dcd4d92 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 547 570 2.2E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_15705 ab641a059d8f35d8be817bc71dcd4d92 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 289 308 2.2E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_15705 ab641a059d8f35d8be817bc71dcd4d92 743 Pfam PF02867 Ribonucleotide reductase, barrel domain 214 727 4.1E-147 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_15705 ab641a059d8f35d8be817bc71dcd4d92 743 SUPERFAMILY SSF48168 17 212 2.88E-53 T 12-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_15705 ab641a059d8f35d8be817bc71dcd4d92 743 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 137 730 3.0E-176 T 12-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_15705 ab641a059d8f35d8be817bc71dcd4d92 743 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 601 623 - T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_04000 d539c0d9c32884e65c01dc0239153f2d 494 Gene3D G3DSA:3.40.600.10 242 456 3.6E-31 T 12-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 N288_04000 d539c0d9c32884e65c01dc0239153f2d 494 SUPERFAMILY SSF52980 248 491 1.45E-29 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 N288_04000 d539c0d9c32884e65c01dc0239153f2d 494 SUPERFAMILY SSF52980 2 236 4.99E-34 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 N288_04000 d539c0d9c32884e65c01dc0239153f2d 494 Gene3D G3DSA:3.40.600.10 5 239 3.5E-40 T 12-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 N288_04000 d539c0d9c32884e65c01dc0239153f2d 494 SMART SM00927 56 172 8.7E-18 T 12-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 N288_04000 d539c0d9c32884e65c01dc0239153f2d 494 Pfam PF02976 DNA mismatch repair enzyme MutH 54 172 1.6E-22 T 12-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 N288_19090 28d393d9b25c49676ba5d907a62f07f1 247 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 8 86 1.1E-31 T 12-10-2018 IPR010627 Peptidase A24A, N-terminal N288_19090 28d393d9b25c49676ba5d907a62f07f1 247 Pfam PF01478 Type IV leader peptidase family 101 204 1.1E-19 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 N288_22875 728719c7a9bbd1fe5cd21d3f41bdc9ab 368 Pfam PF00480 ROK family 129 343 2.1E-41 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 N288_22875 728719c7a9bbd1fe5cd21d3f41bdc9ab 368 Gene3D G3DSA:1.10.10.10 8 78 2.0E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_22875 728719c7a9bbd1fe5cd21d3f41bdc9ab 368 Gene3D G3DSA:3.30.420.40 201 346 1.4E-55 T 12-10-2018 N288_22875 728719c7a9bbd1fe5cd21d3f41bdc9ab 368 Gene3D G3DSA:3.30.420.40 89 200 1.4E-55 T 12-10-2018 N288_22875 728719c7a9bbd1fe5cd21d3f41bdc9ab 368 SUPERFAMILY SSF53067 84 365 1.13E-31 T 12-10-2018 N288_22875 728719c7a9bbd1fe5cd21d3f41bdc9ab 368 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 57 4.6E-5 T 12-10-2018 N288_22875 728719c7a9bbd1fe5cd21d3f41bdc9ab 368 SUPERFAMILY SSF46785 9 74 8.39E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_22875 728719c7a9bbd1fe5cd21d3f41bdc9ab 368 ProSitePatterns PS01125 ROK family signature. 211 238 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 N288_25145 601a409d982abe653bf898d2ed8931ff 257 SUPERFAMILY SSF52540 5 223 1.04E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_25145 601a409d982abe653bf898d2ed8931ff 257 SMART SM00382 30 211 3.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_25145 601a409d982abe653bf898d2ed8931ff 257 Pfam PF00005 ABC transporter 21 162 4.9E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_25145 601a409d982abe653bf898d2ed8931ff 257 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_25145 601a409d982abe653bf898d2ed8931ff 257 Gene3D G3DSA:3.40.50.300 1 238 1.4E-64 T 12-10-2018 N288_22640 1943735311fdb38e377f3eb3b6c70628 399 Pfam PF07470 Glycosyl Hydrolase Family 88 48 393 2.3E-41 T 12-10-2018 IPR010905 Glycosyl hydrolase, family 88 N288_22640 1943735311fdb38e377f3eb3b6c70628 399 SUPERFAMILY SSF48208 30 399 7.94E-120 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 N288_22640 1943735311fdb38e377f3eb3b6c70628 399 Gene3D G3DSA:1.50.10.10 4 399 2.8E-143 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 N288_16700 2f87154843e61085d3d974d143f08994 550 Gene3D G3DSA:1.20.210.10 5 550 1.1E-126 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_16700 2f87154843e61085d3d974d143f08994 550 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 16 468 1.1E-90 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_16700 2f87154843e61085d3d974d143f08994 550 PRINTS PR01165 Cytochrome c oxidase subunit I signature 289 310 1.6E-10 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_16700 2f87154843e61085d3d974d143f08994 550 PRINTS PR01165 Cytochrome c oxidase subunit I signature 420 441 1.6E-10 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_16700 2f87154843e61085d3d974d143f08994 550 PRINTS PR01165 Cytochrome c oxidase subunit I signature 218 239 1.6E-10 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_16700 2f87154843e61085d3d974d143f08994 550 PRINTS PR01165 Cytochrome c oxidase subunit I signature 120 132 1.6E-10 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_16700 2f87154843e61085d3d974d143f08994 550 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 220 274 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_16700 2f87154843e61085d3d974d143f08994 550 SUPERFAMILY SSF81442 13 543 1.2E-110 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_14335 86e8c3e3211b21d2199b208fbe7fb3f0 67 Gene3D G3DSA:1.10.260.40 1 66 1.4E-25 T 12-10-2018 N288_14335 86e8c3e3211b21d2199b208fbe7fb3f0 67 SUPERFAMILY SSF47413 2 63 4.56E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_14335 86e8c3e3211b21d2199b208fbe7fb3f0 67 SMART SM00530 5 60 5.0E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_14335 86e8c3e3211b21d2199b208fbe7fb3f0 67 Pfam PF01381 Helix-turn-helix 6 58 7.4E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_24340 a4b913a599777bb096bfb3492c736c05 594 Pfam PF00326 Prolyl oligopeptidase family 386 592 3.9E-45 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 N288_24340 a4b913a599777bb096bfb3492c736c05 594 Gene3D G3DSA:2.120.10.30 13 200 6.8E-18 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like N288_24340 a4b913a599777bb096bfb3492c736c05 594 Gene3D G3DSA:3.40.50.1820 332 594 1.9E-67 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_24340 a4b913a599777bb096bfb3492c736c05 594 SUPERFAMILY SSF53474 341 591 2.95E-65 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_24340 a4b913a599777bb096bfb3492c736c05 594 SUPERFAMILY SSF82171 14 328 8.24E-28 T 12-10-2018 N288_24340 a4b913a599777bb096bfb3492c736c05 594 Pfam PF07676 WD40-like Beta Propeller Repeat 114 128 0.064 T 12-10-2018 IPR011659 WD40-like Beta Propeller N288_09400 5098e60e63bd2e7fc23a0821c4fcbebb 401 Pfam PF02441 Flavoprotein 5 176 9.3E-47 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 N288_09400 5098e60e63bd2e7fc23a0821c4fcbebb 401 Gene3D G3DSA:3.40.50.1950 1 184 5.8E-61 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 N288_09400 5098e60e63bd2e7fc23a0821c4fcbebb 401 SUPERFAMILY SSF102645 183 397 4.71E-76 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 N288_09400 5098e60e63bd2e7fc23a0821c4fcbebb 401 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 391 5.5E-154 T 12-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 N288_09400 5098e60e63bd2e7fc23a0821c4fcbebb 401 Gene3D G3DSA:3.40.50.10300 185 401 3.4E-85 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 N288_09400 5098e60e63bd2e7fc23a0821c4fcbebb 401 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 185 366 1.3E-73 T 12-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 N288_09400 5098e60e63bd2e7fc23a0821c4fcbebb 401 SUPERFAMILY SSF52507 1 179 1.31E-62 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 N288_05030 9319a9e1b3174b63b8efea024e5d393d 633 Pfam PF16326 ABC transporter C-terminal domain 578 632 7.2E-9 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 N288_05030 9319a9e1b3174b63b8efea024e5d393d 633 Gene3D G3DSA:3.40.50.300 5 298 4.7E-61 T 12-10-2018 N288_05030 9319a9e1b3174b63b8efea024e5d393d 633 Pfam PF00005 ABC transporter 20 205 4.9E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_05030 9319a9e1b3174b63b8efea024e5d393d 633 SUPERFAMILY SSF52540 333 549 3.22E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_05030 9319a9e1b3174b63b8efea024e5d393d 633 Pfam PF00005 ABC transporter 363 491 2.9E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_05030 9319a9e1b3174b63b8efea024e5d393d 633 Gene3D G3DSA:3.40.50.300 310 573 1.6E-57 T 12-10-2018 N288_05030 9319a9e1b3174b63b8efea024e5d393d 633 Pfam PF12848 ABC transporter 244 333 2.0E-20 T 12-10-2018 IPR032781 ABC-transporter extension domain N288_05030 9319a9e1b3174b63b8efea024e5d393d 633 SUPERFAMILY SSF52540 4 258 1.59E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_05030 9319a9e1b3174b63b8efea024e5d393d 633 SMART SM00382 371 536 1.8E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_05030 9319a9e1b3174b63b8efea024e5d393d 633 SMART SM00382 28 250 3.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_24850 f25b8b855cae3a344c9409c90f102777 151 Gene3D G3DSA:3.90.79.10 1 147 1.8E-34 T 12-10-2018 N288_24850 f25b8b855cae3a344c9409c90f102777 151 Pfam PF00293 NUDIX domain 19 139 6.6E-17 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_24850 f25b8b855cae3a344c9409c90f102777 151 SUPERFAMILY SSF55811 15 147 4.2E-28 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_24850 f25b8b855cae3a344c9409c90f102777 151 PRINTS PR00502 NUDIX hydrolase family signature 56 71 4.8E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_24850 f25b8b855cae3a344c9409c90f102777 151 PRINTS PR00502 NUDIX hydrolase family signature 42 56 4.8E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_18980 de633567afb897f6d7626312830ba3a8 430 Gene3D G3DSA:3.40.50.300 158 342 5.3E-61 T 12-10-2018 N288_18980 de633567afb897f6d7626312830ba3a8 430 Gene3D G3DSA:2.70.210.12 1 157 4.3E-62 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily N288_18980 de633567afb897f6d7626312830ba3a8 430 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 360 429 1.4E-24 T 12-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 N288_18980 de633567afb897f6d7626312830ba3a8 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 4.2E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_18980 de633567afb897f6d7626312830ba3a8 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 4.2E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_18980 de633567afb897f6d7626312830ba3a8 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 4.2E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_18980 de633567afb897f6d7626312830ba3a8 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 4.2E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_18980 de633567afb897f6d7626312830ba3a8 430 Hamap MF_01454 GTPase Obg [obg]. 1 329 48.144 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 N288_18980 de633567afb897f6d7626312830ba3a8 430 Gene3D G3DSA:2.40.240.60 359 430 3.6E-16 T 12-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily N288_18980 de633567afb897f6d7626312830ba3a8 430 PIRSF PIRSF002401 1 375 1.8E-143 T 12-10-2018 IPR035101 GTP-binding protein, Obg-type N288_18980 de633567afb897f6d7626312830ba3a8 430 SUPERFAMILY SSF82051 1 157 9.42E-57 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily N288_18980 de633567afb897f6d7626312830ba3a8 430 Pfam PF01018 GTP1/OBG 3 157 2.0E-61 T 12-10-2018 IPR006169 GTP1/OBG domain N288_18980 de633567afb897f6d7626312830ba3a8 430 SUPERFAMILY SSF102741 358 430 1.19E-21 T 12-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily N288_18980 de633567afb897f6d7626312830ba3a8 430 Pfam PF01926 50S ribosome-binding GTPase 160 283 1.7E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_18980 de633567afb897f6d7626312830ba3a8 430 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 12-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 N288_18980 de633567afb897f6d7626312830ba3a8 430 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 328 1.5E-142 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 N288_18980 de633567afb897f6d7626312830ba3a8 430 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 160 319 6.2E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 N288_18980 de633567afb897f6d7626312830ba3a8 430 SUPERFAMILY SSF52540 160 334 3.29E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_18980 de633567afb897f6d7626312830ba3a8 430 Pfam PF09269 Domain of unknown function (DUF1967) 360 428 2.3E-23 T 12-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 N288_20345 d746039a117ecc1be4c5560c450a6b69 61 Pfam PF12606 Tumour necrosis factor receptor superfamily member 19 1 45 1.4E-19 T 12-10-2018 IPR022248 TNF receptor family, RELT N288_25420 3f0424af4940899bf73cddc673d2d69e 557 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 4 556 8.8E-203 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 N288_25420 3f0424af4940899bf73cddc673d2d69e 557 Pfam PF03814 Potassium-transporting ATPase A subunit 10 555 3.2E-225 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 N288_25420 3f0424af4940899bf73cddc673d2d69e 557 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 557 32.41 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 N288_25420 3f0424af4940899bf73cddc673d2d69e 557 PIRSF PIRSF001294 1 557 3.9E-225 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 N288_20435 995270417ea4c352012c351d5ddb28df 801 Pfam PF00343 Carbohydrate phosphorylase 93 793 0.0 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 N288_20435 995270417ea4c352012c351d5ddb28df 801 Gene3D G3DSA:3.40.50.2000 460 786 0.0 T 12-10-2018 N288_20435 995270417ea4c352012c351d5ddb28df 801 Gene3D G3DSA:3.40.50.2000 15 794 0.0 T 12-10-2018 N288_20435 995270417ea4c352012c351d5ddb28df 801 PIRSF PIRSF000460 3 801 8.4E-240 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 N288_20435 995270417ea4c352012c351d5ddb28df 801 SUPERFAMILY SSF53756 4 796 0.0 T 12-10-2018 N288_20435 995270417ea4c352012c351d5ddb28df 801 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 637 649 - T 12-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 N288_20435 995270417ea4c352012c351d5ddb28df 801 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 4 793 0.0 T 12-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 N288_22965 2843fe2b4783074c1c8de1146d81270b 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 65 290 1.3E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_22965 2843fe2b4783074c1c8de1146d81270b 296 SUPERFAMILY SSF161098 55 282 1.44E-54 T 12-10-2018 IPR035906 MetI-like superfamily N288_22965 2843fe2b4783074c1c8de1146d81270b 296 Gene3D G3DSA:1.10.3720.10 51 292 1.1E-64 T 12-10-2018 IPR035906 MetI-like superfamily N288_04480 42ef6578c3595d8644962a8c166f32dc 319 Pfam PF08447 PAS fold 94 150 1.1E-7 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 N288_04480 42ef6578c3595d8644962a8c166f32dc 319 SUPERFAMILY SSF55073 172 317 2.28E-33 T 12-10-2018 IPR029787 Nucleotide cyclase N288_04480 42ef6578c3595d8644962a8c166f32dc 319 SMART SM00267 156 319 2.7E-35 T 12-10-2018 IPR000160 GGDEF domain N288_04480 42ef6578c3595d8644962a8c166f32dc 319 SUPERFAMILY SSF55785 47 158 1.47E-9 T 12-10-2018 IPR035965 PAS domain superfamily N288_04480 42ef6578c3595d8644962a8c166f32dc 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 167 317 2.6E-32 T 12-10-2018 IPR000160 GGDEF domain N288_04480 42ef6578c3595d8644962a8c166f32dc 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 168 317 3.0E-33 T 12-10-2018 IPR000160 GGDEF domain N288_04480 42ef6578c3595d8644962a8c166f32dc 319 Gene3D G3DSA:3.30.70.270 154 319 3.2E-39 T 12-10-2018 N288_04480 42ef6578c3595d8644962a8c166f32dc 319 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 93 163 7.2E-8 T 12-10-2018 IPR000014 PAS domain N288_04480 42ef6578c3595d8644962a8c166f32dc 319 SMART SM00086 115 156 2.5E-4 T 12-10-2018 IPR001610 PAC motif N288_04480 42ef6578c3595d8644962a8c166f32dc 319 Gene3D G3DSA:3.30.450.20 38 153 6.0E-12 T 12-10-2018 N288_11760 cd2083332c66c5a60c789a82fcf05ce3 85 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_11760 cd2083332c66c5a60c789a82fcf05ce3 85 SUPERFAMILY SSF143800 1 80 4.71E-24 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_11760 cd2083332c66c5a60c789a82fcf05ce3 85 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 4.0E-20 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_11760 cd2083332c66c5a60c789a82fcf05ce3 85 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 27.659 T 12-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_11760 cd2083332c66c5a60c789a82fcf05ce3 85 PRINTS PR01249 Ribosomal protein L31 signature 60 78 1.1E-19 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_11760 cd2083332c66c5a60c789a82fcf05ce3 85 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.1E-19 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_11760 cd2083332c66c5a60c789a82fcf05ce3 85 PRINTS PR01249 Ribosomal protein L31 signature 45 60 1.1E-19 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_11760 cd2083332c66c5a60c789a82fcf05ce3 85 Gene3D G3DSA:2.30.170.50 1 84 1.3E-25 T 12-10-2018 N288_11760 cd2083332c66c5a60c789a82fcf05ce3 85 Pfam PF01197 Ribosomal protein L31 1 79 8.3E-28 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_02535 e6297eb3efc5dbd6fe444de8c78bd847 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 4.7E-31 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_02535 e6297eb3efc5dbd6fe444de8c78bd847 66 Gene3D G3DSA:2.40.50.140 1 65 2.2E-30 T 12-10-2018 N288_02535 e6297eb3efc5dbd6fe444de8c78bd847 66 PIRSF PIRSF002599 1 66 1.4E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 N288_02535 e6297eb3efc5dbd6fe444de8c78bd847 66 PRINTS PR00050 Cold shock protein signature 24 33 2.7E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_02535 e6297eb3efc5dbd6fe444de8c78bd847 66 PRINTS PR00050 Cold shock protein signature 4 19 2.7E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_02535 e6297eb3efc5dbd6fe444de8c78bd847 66 PRINTS PR00050 Cold shock protein signature 39 57 2.7E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_02535 e6297eb3efc5dbd6fe444de8c78bd847 66 SUPERFAMILY SSF50249 1 64 5.45E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_02535 e6297eb3efc5dbd6fe444de8c78bd847 66 SMART SM00357 3 66 6.5E-30 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 N288_02535 e6297eb3efc5dbd6fe444de8c78bd847 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 12-10-2018 IPR019844 Cold-shock conserved site N288_03725 77c4e1177fecfba6be7be12db75f4339 241 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 4 235 5.3E-91 T 12-10-2018 IPR012770 Trehalose operon transcriptional repressor N288_03725 77c4e1177fecfba6be7be12db75f4339 241 SMART SM00866 89 228 2.6E-30 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 N288_03725 77c4e1177fecfba6be7be12db75f4339 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 7.6E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_03725 77c4e1177fecfba6be7be12db75f4339 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 6.1E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_03725 77c4e1177fecfba6be7be12db75f4339 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 6.1E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_03725 77c4e1177fecfba6be7be12db75f4339 241 SUPERFAMILY SSF64288 74 233 2.98E-41 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily N288_03725 77c4e1177fecfba6be7be12db75f4339 241 SMART SM00345 8 67 2.6E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_03725 77c4e1177fecfba6be7be12db75f4339 241 Gene3D G3DSA:1.10.10.10 1 68 1.5E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_03725 77c4e1177fecfba6be7be12db75f4339 241 SUPERFAMILY SSF46785 3 77 3.77E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_03725 77c4e1177fecfba6be7be12db75f4339 241 Gene3D G3DSA:3.40.1410.10 87 227 4.5E-31 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily N288_03725 77c4e1177fecfba6be7be12db75f4339 241 Pfam PF07702 UTRA domain 90 228 2.1E-29 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 N288_05580 886db59fc8eb86d51c6d80e2bc6569de 349 SUPERFAMILY SSF82171 48 343 6.28E-29 T 12-10-2018 N288_05580 886db59fc8eb86d51c6d80e2bc6569de 349 Gene3D G3DSA:2.120.10.30 225 349 3.2E-14 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like N288_05580 886db59fc8eb86d51c6d80e2bc6569de 349 Pfam PF07676 WD40-like Beta Propeller Repeat 252 275 0.0042 T 12-10-2018 IPR011659 WD40-like Beta Propeller N288_05580 886db59fc8eb86d51c6d80e2bc6569de 349 Pfam PF07676 WD40-like Beta Propeller Repeat 299 326 0.22 T 12-10-2018 IPR011659 WD40-like Beta Propeller N288_05580 886db59fc8eb86d51c6d80e2bc6569de 349 Gene3D G3DSA:2.120.10.30 43 224 7.3E-12 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like N288_00860 56049aa0a09e426d34ba35290e7b1b78 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 5.1E-29 T 12-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 N288_00860 56049aa0a09e426d34ba35290e7b1b78 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 9.7E-40 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 N288_00860 56049aa0a09e426d34ba35290e7b1b78 72 SMART SM00316 4 72 2.9E-6 T 12-10-2018 IPR022967 RNA-binding domain, S1 N288_00860 56049aa0a09e426d34ba35290e7b1b78 72 SUPERFAMILY SSF50249 1 71 7.1E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_00860 56049aa0a09e426d34ba35290e7b1b78 72 Gene3D G3DSA:2.40.50.140 1 72 1.4E-38 T 12-10-2018 N288_00860 56049aa0a09e426d34ba35290e7b1b78 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 28.347 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 N288_16095 dfb29a943bca46154e64448bcbe24f2b 491 SMART SM00228 126 197 2.7E-18 T 12-10-2018 IPR001478 PDZ domain GO:0005515 N288_16095 dfb29a943bca46154e64448bcbe24f2b 491 SUPERFAMILY SSF47090 396 465 4.4E-15 T 12-10-2018 IPR036365 PGBD-like superfamily N288_16095 dfb29a943bca46154e64448bcbe24f2b 491 Gene3D G3DSA:3.90.226.10 214 384 1.1E-91 T 12-10-2018 N288_16095 dfb29a943bca46154e64448bcbe24f2b 491 Gene3D G3DSA:2.30.42.10 126 213 1.1E-91 T 12-10-2018 N288_16095 dfb29a943bca46154e64448bcbe24f2b 491 Gene3D G3DSA:1.10.101.10 397 474 1.1E-14 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 N288_16095 dfb29a943bca46154e64448bcbe24f2b 491 SUPERFAMILY SSF50156 117 208 3.06E-18 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 N288_16095 dfb29a943bca46154e64448bcbe24f2b 491 Gene3D G3DSA:3.30.750.44 74 362 1.1E-91 T 12-10-2018 N288_16095 dfb29a943bca46154e64448bcbe24f2b 491 SMART SM00245 199 387 6.3E-60 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 N288_16095 dfb29a943bca46154e64448bcbe24f2b 491 SUPERFAMILY SSF52096 69 391 2.32E-67 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_16095 dfb29a943bca46154e64448bcbe24f2b 491 Pfam PF01471 Putative peptidoglycan binding domain 409 464 1.4E-13 T 12-10-2018 IPR002477 Peptidoglycan binding-like N288_16095 dfb29a943bca46154e64448bcbe24f2b 491 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 80 398 7.4E-112 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 N288_16095 dfb29a943bca46154e64448bcbe24f2b 491 Pfam PF13180 PDZ domain 127 205 8.4E-14 T 12-10-2018 IPR001478 PDZ domain GO:0005515 N288_16095 dfb29a943bca46154e64448bcbe24f2b 491 Pfam PF03572 Peptidase family S41 225 385 1.5E-47 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 N288_13165 1edef2befe1a08aca52c2bc1cae89d5d 119 Pfam PF00583 Acetyltransferase (GNAT) family 23 108 4.6E-16 T 12-10-2018 IPR000182 GNAT domain N288_13165 1edef2befe1a08aca52c2bc1cae89d5d 119 SUPERFAMILY SSF55729 19 116 3.38E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_13165 1edef2befe1a08aca52c2bc1cae89d5d 119 Gene3D G3DSA:3.40.630.30 12 118 2.2E-23 T 12-10-2018 N288_05350 6f4e54cf0fc2ee0960d76ba379c87956 487 Pfam PF02378 Phosphotransferase system, EIIC 11 316 2.4E-73 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 N288_05350 6f4e54cf0fc2ee0960d76ba379c87956 487 Pfam PF00367 phosphotransferase system, EIIB 415 447 3.2E-14 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 N288_05350 6f4e54cf0fc2ee0960d76ba379c87956 487 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 375 472 1.3E-16 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 N288_05350 6f4e54cf0fc2ee0960d76ba379c87956 487 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 425 442 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 N288_05350 6f4e54cf0fc2ee0960d76ba379c87956 487 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 483 9.5E-194 T 12-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 N288_05350 6f4e54cf0fc2ee0960d76ba379c87956 487 Gene3D G3DSA:3.30.1360.60 412 486 1.2E-23 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 N288_05350 6f4e54cf0fc2ee0960d76ba379c87956 487 SUPERFAMILY SSF55604 413 485 1.57E-19 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 N288_04320 02ecc4f4112bf6820cbff4faff5e5bd6 221 Gene3D G3DSA:3.10.290.30 1 193 1.5E-32 T 12-10-2018 IPR024047 MM3350-like superfamily N288_04320 02ecc4f4112bf6820cbff4faff5e5bd6 221 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 2 191 1.5E-37 T 12-10-2018 IPR012912 Plasmid pRiA4b, Orf3 N288_04320 02ecc4f4112bf6820cbff4faff5e5bd6 221 SUPERFAMILY SSF159941 1 190 3.14E-30 T 12-10-2018 IPR024047 MM3350-like superfamily N288_21990 12b7c8a579e7733ad2692ec1f8161937 184 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 95 2.1E-32 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 N288_21990 12b7c8a579e7733ad2692ec1f8161937 184 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 184 25.879 T 12-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid N288_21990 12b7c8a579e7733ad2692ec1f8161937 184 SUPERFAMILY SSF69754 2 110 2.09E-36 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like N288_21990 12b7c8a579e7733ad2692ec1f8161937 184 Gene3D G3DSA:3.30.505.50 138 183 3.4E-27 T 12-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily N288_21990 12b7c8a579e7733ad2692ec1f8161937 184 Gene3D G3DSA:3.30.160.100 1 105 4.3E-34 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like N288_21990 12b7c8a579e7733ad2692ec1f8161937 184 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 102 1.8E-37 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 N288_21990 12b7c8a579e7733ad2692ec1f8161937 184 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 126 180 5.6E-29 T 12-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal N288_08580 5a9fa9d583a43a4fe8b2646ef97ad6ab 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site N288_08580 5a9fa9d583a43a4fe8b2646ef97ad6ab 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 1.1E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_08580 5a9fa9d583a43a4fe8b2646ef97ad6ab 198 SUPERFAMILY SSF48498 83 190 3.22E-13 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily N288_08580 5a9fa9d583a43a4fe8b2646ef97ad6ab 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 4.3E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_08580 5a9fa9d583a43a4fe8b2646ef97ad6ab 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 4.3E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_08580 5a9fa9d583a43a4fe8b2646ef97ad6ab 198 SUPERFAMILY SSF46689 2 69 1.85E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_08580 5a9fa9d583a43a4fe8b2646ef97ad6ab 198 Gene3D G3DSA:1.10.357.10 2 193 2.4E-37 T 12-10-2018 N288_04935 bbfb1e2623ccad3908fda094ba397768 448 Pfam PF03390 2-hydroxycarboxylate transporter family 33 441 5.9E-157 T 12-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 N288_04935 bbfb1e2623ccad3908fda094ba397768 448 PIRSF PIRSF005348 12 448 8.5E-166 T 12-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 N288_12795 031981c4ad11e5bda7f0e5cf86f4c523 392 SUPERFAMILY SSF55979 253 377 1.07E-18 T 12-10-2018 N288_12795 031981c4ad11e5bda7f0e5cf86f4c523 392 Pfam PF02767 DNA polymerase III beta subunit, central domain 137 249 3.5E-17 T 12-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 N288_12795 031981c4ad11e5bda7f0e5cf86f4c523 392 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 377 1.2E-46 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 N288_12795 031981c4ad11e5bda7f0e5cf86f4c523 392 Gene3D G3DSA:3.70.10.10 145 375 4.0E-68 T 12-10-2018 N288_12795 031981c4ad11e5bda7f0e5cf86f4c523 392 SUPERFAMILY SSF55979 1 126 3.77E-6 T 12-10-2018 N288_12795 031981c4ad11e5bda7f0e5cf86f4c523 392 SMART SM00480 10 373 1.0E-29 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 N288_12795 031981c4ad11e5bda7f0e5cf86f4c523 392 Gene3D G3DSA:3.10.150.10 1 249 4.0E-68 T 12-10-2018 N288_12795 031981c4ad11e5bda7f0e5cf86f4c523 392 SUPERFAMILY SSF55979 137 249 2.92E-17 T 12-10-2018 N288_12795 031981c4ad11e5bda7f0e5cf86f4c523 392 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 255 376 2.5E-15 T 12-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 N288_23355 57768027197f5d68f75181941058dfad 870 SUPERFAMILY SSF56300 298 588 9.58E-79 T 12-10-2018 N288_23355 57768027197f5d68f75181941058dfad 870 Gene3D G3DSA:3.90.780.10 595 800 6.2E-66 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23355 57768027197f5d68f75181941058dfad 870 Gene3D G3DSA:2.60.40.1220 197 281 1.1E-6 T 12-10-2018 N288_23355 57768027197f5d68f75181941058dfad 870 SUPERFAMILY SSF55816 593 797 2.62E-57 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23355 57768027197f5d68f75181941058dfad 870 Pfam PF00395 S-layer homology domain 88 128 3.6E-7 T 12-10-2018 IPR001119 S-layer homology domain N288_23355 57768027197f5d68f75181941058dfad 870 Pfam PF00395 S-layer homology domain 145 185 4.6E-4 T 12-10-2018 IPR001119 S-layer homology domain N288_23355 57768027197f5d68f75181941058dfad 870 Pfam PF02872 5'-nucleotidase, C-terminal domain 595 757 9.3E-48 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23355 57768027197f5d68f75181941058dfad 870 Gene3D G3DSA:3.60.21.10 300 593 5.7E-97 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_23355 57768027197f5d68f75181941058dfad 870 Pfam PF00149 Calcineurin-like phosphoesterase 302 517 4.8E-14 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 N288_23355 57768027197f5d68f75181941058dfad 870 ProSitePatterns PS00785 5'-nucleotidase signature 1. 302 314 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23355 57768027197f5d68f75181941058dfad 870 PRINTS PR01607 Apyrase family signature 731 750 1.3E-38 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23355 57768027197f5d68f75181941058dfad 870 PRINTS PR01607 Apyrase family signature 532 552 1.3E-38 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23355 57768027197f5d68f75181941058dfad 870 PRINTS PR01607 Apyrase family signature 654 677 1.3E-38 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23355 57768027197f5d68f75181941058dfad 870 PRINTS PR01607 Apyrase family signature 300 318 1.3E-38 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23355 57768027197f5d68f75181941058dfad 870 PRINTS PR01607 Apyrase family signature 476 493 1.3E-38 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23355 57768027197f5d68f75181941058dfad 870 PRINTS PR01607 Apyrase family signature 500 523 1.3E-38 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_09430 368a6c9990248092fbbb3ab52fd4539c 253 Gene3D G3DSA:3.60.40.10 1 244 4.5E-68 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_09430 368a6c9990248092fbbb3ab52fd4539c 253 SMART SM00331 7 242 2.3E-51 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_09430 368a6c9990248092fbbb3ab52fd4539c 253 Pfam PF13672 Protein phosphatase 2C 14 209 1.5E-12 T 12-10-2018 N288_09430 368a6c9990248092fbbb3ab52fd4539c 253 SUPERFAMILY SSF81606 2 242 2.09E-60 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_09430 368a6c9990248092fbbb3ab52fd4539c 253 SMART SM00332 1 240 5.4E-23 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_20840 ebc45ba63033e4507d7ff7f4be3ddecf 257 Gene3D G3DSA:3.40.50.720 2 257 1.8E-84 T 12-10-2018 N288_20840 ebc45ba63033e4507d7ff7f4be3ddecf 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 3.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20840 ebc45ba63033e4507d7ff7f4be3ddecf 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 3.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20840 ebc45ba63033e4507d7ff7f4be3ddecf 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 3.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20840 ebc45ba63033e4507d7ff7f4be3ddecf 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 254 5.4E-63 T 12-10-2018 N288_20840 ebc45ba63033e4507d7ff7f4be3ddecf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 6.6E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20840 ebc45ba63033e4507d7ff7f4be3ddecf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 6.6E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20840 ebc45ba63033e4507d7ff7f4be3ddecf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 6.6E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20840 ebc45ba63033e4507d7ff7f4be3ddecf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 6.6E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20840 ebc45ba63033e4507d7ff7f4be3ddecf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 6.6E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20840 ebc45ba63033e4507d7ff7f4be3ddecf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 6.6E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20840 ebc45ba63033e4507d7ff7f4be3ddecf 257 SUPERFAMILY SSF51735 11 255 3.71E-83 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_05260 8dd4a0d738c9cb00cbf23f5bf3d982c4 679 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 417 434 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 N288_05260 8dd4a0d738c9cb00cbf23f5bf3d982c4 679 Gene3D G3DSA:2.40.40.20 544 678 1.2E-25 T 12-10-2018 N288_05260 8dd4a0d738c9cb00cbf23f5bf3d982c4 679 Gene3D G3DSA:3.30.2070.10 432 520 1.2E-150 T 12-10-2018 N288_05260 8dd4a0d738c9cb00cbf23f5bf3d982c4 679 Pfam PF00384 Molybdopterin oxidoreductase 66 471 5.7E-60 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_05260 8dd4a0d738c9cb00cbf23f5bf3d982c4 679 Gene3D G3DSA:2.20.25.90 3 68 2.2E-14 T 12-10-2018 N288_05260 8dd4a0d738c9cb00cbf23f5bf3d982c4 679 Pfam PF01568 Molydopterin dinucleotide binding domain 568 668 3.0E-18 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 N288_05260 8dd4a0d738c9cb00cbf23f5bf3d982c4 679 Gene3D G3DSA:3.40.228.10 144 541 1.2E-150 T 12-10-2018 N288_05260 8dd4a0d738c9cb00cbf23f5bf3d982c4 679 SUPERFAMILY SSF50692 526 677 1.92E-30 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily N288_05260 8dd4a0d738c9cb00cbf23f5bf3d982c4 679 Gene3D G3DSA:3.40.50.740 77 477 1.2E-150 T 12-10-2018 N288_05260 8dd4a0d738c9cb00cbf23f5bf3d982c4 679 SUPERFAMILY SSF53706 11 554 1.44E-162 T 12-10-2018 N288_05260 8dd4a0d738c9cb00cbf23f5bf3d982c4 679 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 11 62 1.6E-14 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_05260 8dd4a0d738c9cb00cbf23f5bf3d982c4 679 SMART SM00926 8 63 1.4E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_10010 05e5bf44e6d62c34598b3d8f384590da 199 Pfam PF02441 Flavoprotein 6 167 5.1E-17 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 N288_10010 05e5bf44e6d62c34598b3d8f384590da 199 SUPERFAMILY SSF52507 6 191 5.49E-28 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 N288_10010 05e5bf44e6d62c34598b3d8f384590da 199 PIRSF PIRSF001390 1 195 9.0E-78 T 12-10-2018 IPR014214 Dipicolinic acid synthetase, subunit B N288_10010 05e5bf44e6d62c34598b3d8f384590da 199 TIGRFAM TIGR02852 spore_dpaB: dipicolinic acid synthetase, B subunit 6 192 1.4E-100 T 12-10-2018 IPR014214 Dipicolinic acid synthetase, subunit B N288_10010 05e5bf44e6d62c34598b3d8f384590da 199 Gene3D G3DSA:3.40.50.1950 1 199 1.6E-59 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 N288_18715 ce4cd54633e27e2e2082c190934d36bd 377 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 30 377 33.462 T 12-10-2018 IPR003770 Endolytic murein transglycosylase N288_18715 ce4cd54633e27e2e2082c190934d36bd 377 Gene3D G3DSA:1.10.8.1150 64 139 7.9E-27 T 12-10-2018 N288_18715 ce4cd54633e27e2e2082c190934d36bd 377 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 29 375 3.1E-106 T 12-10-2018 IPR003770 Endolytic murein transglycosylase N288_18715 ce4cd54633e27e2e2082c190934d36bd 377 Pfam PF02618 YceG-like family 70 371 5.2E-79 T 12-10-2018 IPR003770 Endolytic murein transglycosylase N288_11635 2571505d52c2822223101b0f9051201b 411 Gene3D G3DSA:3.40.640.10 73 309 1.1E-139 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_11635 2571505d52c2822223101b0f9051201b 411 TIGRFAM TIGR01825 gly_Cac_T_rel: putative pyridoxal phosphate-dependent acyltransferase 25 411 1.7E-197 T 12-10-2018 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type N288_11635 2571505d52c2822223101b0f9051201b 411 SUPERFAMILY SSF53383 23 409 1.5E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_11635 2571505d52c2822223101b0f9051201b 411 Gene3D G3DSA:3.90.1150.10 53 402 1.1E-139 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_11635 2571505d52c2822223101b0f9051201b 411 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 256 265 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 N288_11635 2571505d52c2822223101b0f9051201b 411 Pfam PF00155 Aminotransferase class I and II 58 398 1.3E-68 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 N288_03995 04c3429ec545daeb169791fb2f6a7586 603 SUPERFAMILY SSF52540 1 338 1.83E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_03995 04c3429ec545daeb169791fb2f6a7586 603 Pfam PF13175 AAA ATPase domain 1 50 1.1E-12 T 12-10-2018 N288_03995 04c3429ec545daeb169791fb2f6a7586 603 Pfam PF13175 AAA ATPase domain 138 336 4.0E-25 T 12-10-2018 N288_03995 04c3429ec545daeb169791fb2f6a7586 603 Gene3D G3DSA:3.40.50.300 1 349 3.0E-24 T 12-10-2018 N288_02190 577a223b158ab8738e61c5a11e9c4c11 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 269 2.2E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_02190 577a223b158ab8738e61c5a11e9c4c11 274 Gene3D G3DSA:1.10.3720.10 1 263 3.2E-55 T 12-10-2018 IPR035906 MetI-like superfamily N288_02190 577a223b158ab8738e61c5a11e9c4c11 274 SUPERFAMILY SSF161098 5 270 2.62E-59 T 12-10-2018 IPR035906 MetI-like superfamily N288_23540 ba1e25f465a0b74e1b53e908128cfb81 274 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 145 1.2E-22 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G N288_23540 ba1e25f465a0b74e1b53e908128cfb81 274 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 194 271 2.3E-18 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain N288_23540 ba1e25f465a0b74e1b53e908128cfb81 274 Pfam PF00460 Flagella basal body rod protein 7 35 1.3E-8 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 N288_23540 ba1e25f465a0b74e1b53e908128cfb81 274 SUPERFAMILY SSF117143 112 235 1.2E-9 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like N288_09645 2ee2f78b4889e1f209c8a069930148ea 281 Pfam PF02481 DNA recombination-mediator protein A 63 270 1.1E-80 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 N288_09645 2ee2f78b4889e1f209c8a069930148ea 281 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 62 279 3.6E-78 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 N288_09645 2ee2f78b4889e1f209c8a069930148ea 281 SUPERFAMILY SSF102405 72 279 8.7E-37 T 12-10-2018 N288_09645 2ee2f78b4889e1f209c8a069930148ea 281 Gene3D G3DSA:3.40.50.450 2 281 7.7E-97 T 12-10-2018 N288_19840 d1b7a5cae5840058cc0435d1d50c93cf 210 Gene3D G3DSA:1.10.357.10 1 201 7.5E-35 T 12-10-2018 N288_19840 d1b7a5cae5840058cc0435d1d50c93cf 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 55 4.5E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_19840 d1b7a5cae5840058cc0435d1d50c93cf 210 SUPERFAMILY SSF46689 3 69 2.1E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_19840 d1b7a5cae5840058cc0435d1d50c93cf 210 SUPERFAMILY SSF48498 80 191 1.27E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily N288_19840 d1b7a5cae5840058cc0435d1d50c93cf 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 1.9E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_19840 d1b7a5cae5840058cc0435d1d50c93cf 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 1.9E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_09435 e31a98a5975872a8dd33660a0144ff41 658 SUPERFAMILY SSF56112 8 268 4.72E-84 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_09435 e31a98a5975872a8dd33660a0144ff41 658 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 130 142 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 N288_09435 e31a98a5975872a8dd33660a0144ff41 658 Gene3D G3DSA:1.10.510.10 92 277 2.4E-56 T 12-10-2018 N288_09435 e31a98a5975872a8dd33660a0144ff41 658 Gene3D G3DSA:3.30.200.20 1 90 1.5E-33 T 12-10-2018 N288_09435 e31a98a5975872a8dd33660a0144ff41 658 Gene3D G3DSA:2.60.40.2560 577 655 2.1E-16 T 12-10-2018 N288_09435 e31a98a5975872a8dd33660a0144ff41 658 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 17 40 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 N288_09435 e31a98a5975872a8dd33660a0144ff41 658 Pfam PF03793 PASTA domain 370 432 1.1E-13 T 12-10-2018 IPR005543 PASTA domain N288_09435 e31a98a5975872a8dd33660a0144ff41 658 Pfam PF03793 PASTA domain 509 570 2.0E-10 T 12-10-2018 IPR005543 PASTA domain N288_09435 e31a98a5975872a8dd33660a0144ff41 658 Pfam PF03793 PASTA domain 439 501 4.5E-12 T 12-10-2018 IPR005543 PASTA domain N288_09435 e31a98a5975872a8dd33660a0144ff41 658 Gene3D G3DSA:3.30.10.20 367 434 3.9E-17 T 12-10-2018 N288_09435 e31a98a5975872a8dd33660a0144ff41 658 SMART SM00740 366 433 4.9E-16 T 12-10-2018 IPR005543 PASTA domain N288_09435 e31a98a5975872a8dd33660a0144ff41 658 SMART SM00740 434 502 8.7E-14 T 12-10-2018 IPR005543 PASTA domain N288_09435 e31a98a5975872a8dd33660a0144ff41 658 SMART SM00740 503 570 7.1E-10 T 12-10-2018 IPR005543 PASTA domain N288_09435 e31a98a5975872a8dd33660a0144ff41 658 SMART SM00220 11 271 2.8E-72 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 N288_09435 e31a98a5975872a8dd33660a0144ff41 658 Pfam PF00069 Protein kinase domain 11 257 1.6E-56 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 N288_09435 e31a98a5975872a8dd33660a0144ff41 658 Gene3D G3DSA:3.30.10.20 435 504 2.3E-12 T 12-10-2018 N288_09435 e31a98a5975872a8dd33660a0144ff41 658 Gene3D G3DSA:3.30.10.20 507 573 7.2E-13 T 12-10-2018 N288_21740 2322d76679c73efa04f723c4c871cb70 309 Pfam PF07475 HPr Serine kinase C-terminal domain 130 298 3.2E-78 T 12-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 N288_21740 2322d76679c73efa04f723c4c871cb70 309 Gene3D G3DSA:3.40.50.300 131 309 1.9E-75 T 12-10-2018 N288_21740 2322d76679c73efa04f723c4c871cb70 309 SUPERFAMILY SSF53795 132 298 3.36E-42 T 12-10-2018 N288_21740 2322d76679c73efa04f723c4c871cb70 309 Gene3D G3DSA:3.40.1390.20 3 130 6.1E-43 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily N288_21740 2322d76679c73efa04f723c4c871cb70 309 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 6 301 2.2E-118 T 12-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 N288_21740 2322d76679c73efa04f723c4c871cb70 309 Pfam PF02603 HPr Serine kinase N terminus 4 127 4.7E-40 T 12-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 N288_21740 2322d76679c73efa04f723c4c871cb70 309 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 306 41.865 T 12-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 N288_21740 2322d76679c73efa04f723c4c871cb70 309 SUPERFAMILY SSF75138 3 131 2.35E-38 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily N288_05385 60ce3c879f664cda79a36798b6a8661e 267 SUPERFAMILY SSF53850 1 264 2.66E-66 T 12-10-2018 N288_05385 60ce3c879f664cda79a36798b6a8661e 267 SMART SM00079 45 263 0.0023 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 N288_05385 60ce3c879f664cda79a36798b6a8661e 267 Gene3D G3DSA:3.40.190.10 128 225 4.3E-68 T 12-10-2018 N288_05385 60ce3c879f664cda79a36798b6a8661e 267 Gene3D G3DSA:3.40.190.10 44 255 4.3E-68 T 12-10-2018 N288_05385 60ce3c879f664cda79a36798b6a8661e 267 SMART SM00062 45 264 6.6E-63 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF N288_05385 60ce3c879f664cda79a36798b6a8661e 267 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 262 3.9E-60 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF N288_05245 cd6220177141544f56a353e94f1a396b 294 Gene3D G3DSA:2.60.120.260 112 274 6.9E-18 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily N288_05245 cd6220177141544f56a353e94f1a396b 294 Gene3D G3DSA:1.10.10.60 2 57 4.9E-18 T 12-10-2018 N288_05245 cd6220177141544f56a353e94f1a396b 294 SUPERFAMILY SSF46689 57 105 2.59E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_05245 cd6220177141544f56a353e94f1a396b 294 SMART SM00342 21 104 1.9E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_05245 cd6220177141544f56a353e94f1a396b 294 Pfam PF12833 Helix-turn-helix domain 27 105 4.1E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_05245 cd6220177141544f56a353e94f1a396b 294 SUPERFAMILY SSF46689 5 55 9.96E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_05245 cd6220177141544f56a353e94f1a396b 294 Gene3D G3DSA:1.10.10.60 58 111 3.9E-14 T 12-10-2018 N288_20360 6d217f113358814ba650778bdd56fba0 75 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 6 74 1.2E-32 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor N288_20360 6d217f113358814ba650778bdd56fba0 75 Pfam PF01809 Haemolytic domain 4 69 1.5E-31 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor N288_20360 6d217f113358814ba650778bdd56fba0 75 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 2 70 25.494 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor N288_20360 6d217f113358814ba650778bdd56fba0 75 SMART SM01234 2 69 1.4E-46 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor N288_20360 6d217f113358814ba650778bdd56fba0 75 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 17 69 1.0E-20 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor N288_18565 f7395b1fccd48a9760fbae66eb85230b 118 Gene3D G3DSA:3.30.460.10 1 108 1.3E-38 T 12-10-2018 N288_18565 f7395b1fccd48a9760fbae66eb85230b 118 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 1.0E-35 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS N288_18565 f7395b1fccd48a9760fbae66eb85230b 118 SUPERFAMILY SSF81301 2 114 1.44E-40 T 12-10-2018 N288_18565 f7395b1fccd48a9760fbae66eb85230b 118 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 3.0E-26 T 12-10-2018 N288_18565 f7395b1fccd48a9760fbae66eb85230b 118 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.441 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS N288_11770 d03d0e6377a0cc53865cb8c54d6c6b95 106 Pfam PF11588 Protein of unknown function (DUF3243) 28 105 4.1E-31 T 12-10-2018 IPR021637 Protein of unknown function DUF3243 N288_11770 d03d0e6377a0cc53865cb8c54d6c6b95 106 PIRSF PIRSF004764 21 106 9.8E-24 T 12-10-2018 IPR024702 Uncharacterised conserved protein YmfJ N288_11770 d03d0e6377a0cc53865cb8c54d6c6b95 106 Gene3D G3DSA:1.10.760.20 24 106 9.9E-33 T 12-10-2018 IPR038292 YmfJ/YflH superfamily N288_19505 09f984b894c91e4020afe7c653dde159 167 SUPERFAMILY SSF54364 2 74 7.98E-29 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 N288_19505 09f984b894c91e4020afe7c653dde159 167 SUPERFAMILY SSF55200 79 164 1.18E-33 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 N288_19505 09f984b894c91e4020afe7c653dde159 167 Gene3D G3DSA:3.30.110.10 72 166 2.0E-37 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 N288_19505 09f984b894c91e4020afe7c653dde159 167 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 3 164 5.9E-74 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 N288_19505 09f984b894c91e4020afe7c653dde159 167 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 79 164 6.6E-39 T 12-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 N288_19505 09f984b894c91e4020afe7c653dde159 167 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 3 72 7.6E-31 T 12-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 N288_19505 09f984b894c91e4020afe7c653dde159 167 ProSitePatterns PS00938 Initiation factor 3 signature. 54 67 - T 12-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 N288_19505 09f984b894c91e4020afe7c653dde159 167 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 166 29.399 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 N288_19505 09f984b894c91e4020afe7c653dde159 167 Gene3D G3DSA:3.10.20.80 1 71 2.5E-32 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 N288_25180 ee5acc0fd1945f82eb21fa62d0fbe8b2 448 SUPERFAMILY SSF56112 142 441 3.06E-24 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_25180 ee5acc0fd1945f82eb21fa62d0fbe8b2 448 Pfam PF01636 Phosphotransferase enzyme family 198 394 1.2E-12 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase N288_02600 a94a797f79e3ff9851153dcc84a172c1 274 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 1.5E-12 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_02600 a94a797f79e3ff9851153dcc84a172c1 274 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 103 116 1.5E-12 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_02600 a94a797f79e3ff9851153dcc84a172c1 274 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 1.5E-12 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_02600 a94a797f79e3ff9851153dcc84a172c1 274 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 1.5E-12 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_02600 a94a797f79e3ff9851153dcc84a172c1 274 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 185 4.8E-13 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_02600 a94a797f79e3ff9851153dcc84a172c1 274 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 94 190 4.1E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_02600 a94a797f79e3ff9851153dcc84a172c1 274 Gene3D G3DSA:1.10.150.520 15 91 6.1E-48 T 12-10-2018 N288_02600 a94a797f79e3ff9851153dcc84a172c1 274 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 190 9.4E-35 T 12-10-2018 N288_02600 a94a797f79e3ff9851153dcc84a172c1 274 SUPERFAMILY SSF56784 1 216 1.1E-41 T 12-10-2018 IPR036412 HAD-like superfamily N288_02600 a94a797f79e3ff9851153dcc84a172c1 274 Gene3D G3DSA:3.40.50.1000 2 211 6.1E-48 T 12-10-2018 IPR023214 HAD superfamily N288_13595 4039d6600d1e32e20dd1fbc52ffd7736 281 Gene3D G3DSA:2.30.320.10 5 281 3.5E-85 T 12-10-2018 IPR035948 YwqG-like superfamily N288_13595 4039d6600d1e32e20dd1fbc52ffd7736 281 SUPERFAMILY SSF103032 11 281 8.89E-70 T 12-10-2018 IPR035948 YwqG-like superfamily N288_13595 4039d6600d1e32e20dd1fbc52ffd7736 281 Pfam PF09234 Domain of unknown function (DUF1963) 39 280 1.2E-62 T 12-10-2018 IPR015315 Protein of unknown function DUF1963 N288_07630 d37d7706b0e8b59bec26028bfa7f02b1 355 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_07630 d37d7706b0e8b59bec26028bfa7f02b1 355 SUPERFAMILY SSF52540 4 254 1.81E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_07630 d37d7706b0e8b59bec26028bfa7f02b1 355 SMART SM00382 33 241 2.4E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_07630 d37d7706b0e8b59bec26028bfa7f02b1 355 Gene3D G3DSA:3.40.50.300 1 328 1.2E-97 T 12-10-2018 N288_07630 d37d7706b0e8b59bec26028bfa7f02b1 355 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 1.5E-17 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_07630 d37d7706b0e8b59bec26028bfa7f02b1 355 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 297 1.1E-12 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_07630 d37d7706b0e8b59bec26028bfa7f02b1 355 Pfam PF00005 ABC transporter 25 183 1.6E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_21495 654745c3d64eaff69df65f83af958e36 1043 SUPERFAMILY SSF58104 511 748 4.84E-9 T 12-10-2018 N288_21495 654745c3d64eaff69df65f83af958e36 1043 Gene3D G3DSA:1.20.1640.10 146 348 1.6E-12 T 12-10-2018 N288_21495 654745c3d64eaff69df65f83af958e36 1043 Pfam PF03176 MMPL family 747 1039 2.2E-46 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 N288_21495 654745c3d64eaff69df65f83af958e36 1043 Pfam PF03176 MMPL family 52 366 1.6E-59 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 N288_21495 654745c3d64eaff69df65f83af958e36 1043 SUPERFAMILY SSF82866 150 341 2.35E-31 T 12-10-2018 N288_21495 654745c3d64eaff69df65f83af958e36 1043 Gene3D G3DSA:1.20.1640.10 845 1033 3.1E-6 T 12-10-2018 N288_21495 654745c3d64eaff69df65f83af958e36 1043 SUPERFAMILY SSF82866 829 1036 2.62E-29 T 12-10-2018 N288_07215 37a94d12cf23bb3e5c90bbaa113512c1 1254 Gene3D G3DSA:3.40.50.300 774 980 5.6E-49 T 12-10-2018 N288_07215 37a94d12cf23bb3e5c90bbaa113512c1 1254 Gene3D G3DSA:3.40.50.300 483 773 1.0E-58 T 12-10-2018 N288_07215 37a94d12cf23bb3e5c90bbaa113512c1 1254 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1073 1240 2.2E-7 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type N288_07215 37a94d12cf23bb3e5c90bbaa113512c1 1254 SUPERFAMILY SSF52980 1032 1251 8.58E-43 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 N288_07215 37a94d12cf23bb3e5c90bbaa113512c1 1254 Pfam PF13361 UvrD-like helicase C-terminal domain 480 900 9.1E-33 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 N288_07215 37a94d12cf23bb3e5c90bbaa113512c1 1254 SUPERFAMILY SSF52540 8 903 1.67E-116 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_07215 37a94d12cf23bb3e5c90bbaa113512c1 1254 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 12 1253 19.973 T 12-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 N288_07215 37a94d12cf23bb3e5c90bbaa113512c1 1254 Pfam PF00580 UvrD/REP helicase N-terminal domain 15 469 1.0E-84 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 N288_07215 37a94d12cf23bb3e5c90bbaa113512c1 1254 Gene3D G3DSA:3.90.320.10 1011 1253 1.2E-82 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal N288_07215 37a94d12cf23bb3e5c90bbaa113512c1 1254 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 15 1252 0.0 T 12-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 N288_07215 37a94d12cf23bb3e5c90bbaa113512c1 1254 Gene3D G3DSA:3.40.50.300 8 207 2.5E-39 T 12-10-2018 N288_07215 37a94d12cf23bb3e5c90bbaa113512c1 1254 Gene3D G3DSA:3.40.50.300 300 482 1.3E-28 T 12-10-2018 N288_11945 73325ea84e3a9c8c8f3af72a686520e3 487 Gene3D G3DSA:3.40.605.10 25 462 1.1E-149 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 N288_11945 73325ea84e3a9c8c8f3af72a686520e3 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 N288_11945 73325ea84e3a9c8c8f3af72a686520e3 487 Pfam PF00171 Aldehyde dehydrogenase family 18 481 7.6E-146 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 N288_11945 73325ea84e3a9c8c8f3af72a686520e3 487 Hamap MF_01670 Malonate-semialdehyde dehydrogenase [iolA]. 4 485 67.723 T 12-10-2018 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642 N288_11945 73325ea84e3a9c8c8f3af72a686520e3 487 SUPERFAMILY SSF53720 6 484 6.54E-148 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 N288_11945 73325ea84e3a9c8c8f3af72a686520e3 487 Gene3D G3DSA:3.40.309.10 255 454 1.1E-149 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 N288_11945 73325ea84e3a9c8c8f3af72a686520e3 487 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 11 485 1.8E-183 T 12-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 N288_24085 95e6876b23168adf1248cdbea39ffa1b 224 SMART SM00987 49 209 1.8E-36 T 12-10-2018 N288_24085 95e6876b23168adf1248cdbea39ffa1b 224 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 213 5.0E-86 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 N288_24085 95e6876b23168adf1248cdbea39ffa1b 224 Gene3D G3DSA:3.40.470.10 1 223 2.1E-103 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 N288_24085 95e6876b23168adf1248cdbea39ffa1b 224 SUPERFAMILY SSF52141 2 221 1.74E-95 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 N288_24085 95e6876b23168adf1248cdbea39ffa1b 224 Pfam PF03167 Uracil DNA glycosylase superfamily 52 208 1.7E-24 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 N288_24085 95e6876b23168adf1248cdbea39ffa1b 224 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 5 220 42.011 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 N288_24085 95e6876b23168adf1248cdbea39ffa1b 224 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 12-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 N288_24085 95e6876b23168adf1248cdbea39ffa1b 224 SMART SM00986 49 209 1.8E-36 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 N288_24160 08ee709381b89477b402e8e9e7a27989 147 Gene3D G3DSA:3.30.530.20 3 146 2.0E-20 T 12-10-2018 IPR023393 START-like domain superfamily N288_24160 08ee709381b89477b402e8e9e7a27989 147 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 142 6.2E-13 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase N288_24160 08ee709381b89477b402e8e9e7a27989 147 SUPERFAMILY SSF55961 1 144 3.52E-20 T 12-10-2018 N288_12450 180968eb2e9aef9b4940c70d6c16c808 946 Pfam PF02779 Transketolase, pyrimidine binding domain 593 790 1.9E-55 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain N288_12450 180968eb2e9aef9b4940c70d6c16c808 946 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 797 938 2.5E-42 T 12-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 N288_12450 180968eb2e9aef9b4940c70d6c16c808 946 Gene3D G3DSA:3.40.50.11610 730 936 7.2E-155 T 12-10-2018 N288_12450 180968eb2e9aef9b4940c70d6c16c808 946 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 16 49 6.6E-10 T 12-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 N288_12450 180968eb2e9aef9b4940c70d6c16c808 946 SMART SM00861 594 790 8.4E-44 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain N288_12450 180968eb2e9aef9b4940c70d6c16c808 946 SUPERFAMILY SSF52518 576 795 1.77E-40 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_12450 180968eb2e9aef9b4940c70d6c16c808 946 Hamap MF_01169 2-oxoglutarate dehydrogenase E1 component [odhA]. 1 940 23.151 T 12-10-2018 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 N288_12450 180968eb2e9aef9b4940c70d6c16c808 946 Gene3D G3DSA:3.40.50.12470 552 812 7.2E-155 T 12-10-2018 N288_12450 180968eb2e9aef9b4940c70d6c16c808 946 Pfam PF00676 Dehydrogenase E1 component 220 530 4.6E-73 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 N288_12450 180968eb2e9aef9b4940c70d6c16c808 946 Gene3D G3DSA:3.40.50.970 153 535 3.2E-136 T 12-10-2018 N288_12450 180968eb2e9aef9b4940c70d6c16c808 946 SUPERFAMILY SSF52518 150 571 1.18E-73 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_12450 180968eb2e9aef9b4940c70d6c16c808 946 PIRSF PIRSF000157 6 940 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 N288_12450 180968eb2e9aef9b4940c70d6c16c808 946 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 16 938 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 N288_17895 7b70614442948caba629e19c9607c86a 309 SUPERFAMILY SSF52540 22 262 1.81E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_17895 7b70614442948caba629e19c9607c86a 309 TIGRFAM TIGR02858 spore_III_AA: stage III sporulation protein AA 28 294 7.2E-115 T 12-10-2018 IPR014217 Sporulation stage III, protein AA N288_17895 7b70614442948caba629e19c9607c86a 309 Gene3D G3DSA:3.40.50.300 117 279 9.4E-21 T 12-10-2018 N288_17895 7b70614442948caba629e19c9607c86a 309 SMART SM00382 135 284 4.6E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_24370 8dc65d0a81481f31d38b74a25d3ca89c 500 Gene3D G3DSA:3.40.50.300 258 497 2.9E-39 T 12-10-2018 N288_24370 8dc65d0a81481f31d38b74a25d3ca89c 500 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_24370 8dc65d0a81481f31d38b74a25d3ca89c 500 SUPERFAMILY SSF52540 271 492 8.62E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_24370 8dc65d0a81481f31d38b74a25d3ca89c 500 Pfam PF00005 ABC transporter 276 429 4.2E-17 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_24370 8dc65d0a81481f31d38b74a25d3ca89c 500 Gene3D G3DSA:3.40.50.300 2 250 3.9E-57 T 12-10-2018 N288_24370 8dc65d0a81481f31d38b74a25d3ca89c 500 Pfam PF00005 ABC transporter 25 174 1.6E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_24370 8dc65d0a81481f31d38b74a25d3ca89c 500 SMART SM00382 34 222 3.2E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_24370 8dc65d0a81481f31d38b74a25d3ca89c 500 SMART SM00382 284 478 0.088 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_24370 8dc65d0a81481f31d38b74a25d3ca89c 500 SUPERFAMILY SSF52540 9 235 1.28E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_21085 23daa1db2ab671f26c04802ceedc4e11 249 Pfam PF09560 Sporulation protein YunB (Spo_YunB) 143 232 7.8E-29 T 12-10-2018 IPR014197 Sporulation protein YunB N288_21085 23daa1db2ab671f26c04802ceedc4e11 249 TIGRFAM TIGR02832 spo_yunB: sporulation protein YunB 14 235 2.7E-53 T 12-10-2018 IPR014197 Sporulation protein YunB N288_21085 23daa1db2ab671f26c04802ceedc4e11 249 PIRSF PIRSF021383 1 248 5.8E-73 T 12-10-2018 IPR014197 Sporulation protein YunB N288_09775 a410afa8b03e327403493789c2d92a52 221 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 150 165 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 N288_09775 a410afa8b03e327403493789c2d92a52 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 1.5E-24 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 N288_09775 a410afa8b03e327403493789c2d92a52 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 121 133 1.5E-24 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 N288_09775 a410afa8b03e327403493789c2d92a52 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 21 30 1.5E-24 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 N288_09775 a410afa8b03e327403493789c2d92a52 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 81 93 1.5E-24 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 N288_09775 a410afa8b03e327403493789c2d92a52 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 211 221 1.5E-24 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 N288_09775 a410afa8b03e327403493789c2d92a52 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 93 107 1.5E-24 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 N288_09775 a410afa8b03e327403493789c2d92a52 221 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 198 210 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 N288_09775 a410afa8b03e327403493789c2d92a52 221 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 25 221 1.8E-91 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 N288_09775 a410afa8b03e327403493789c2d92a52 221 Pfam PF00813 FliP family 25 217 1.1E-83 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 N288_09775 a410afa8b03e327403493789c2d92a52 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 150 170 1.2E-67 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 N288_09775 a410afa8b03e327403493789c2d92a52 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 23 42 1.2E-67 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 N288_09775 a410afa8b03e327403493789c2d92a52 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 171 192 1.2E-67 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 N288_09775 a410afa8b03e327403493789c2d92a52 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 42 62 1.2E-67 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 N288_09775 a410afa8b03e327403493789c2d92a52 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 195 220 1.2E-67 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 N288_09775 a410afa8b03e327403493789c2d92a52 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 62 81 1.2E-67 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 N288_21570 e9ae335e8dc70e63a0b57744c9b41d33 248 SUPERFAMILY SSF53474 10 245 1.16E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_21570 e9ae335e8dc70e63a0b57744c9b41d33 248 Gene3D G3DSA:3.40.50.1820 1 246 5.6E-60 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_21570 e9ae335e8dc70e63a0b57744c9b41d33 248 Pfam PF12146 Serine aminopeptidase, S33 15 229 7.2E-15 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 N288_21570 e9ae335e8dc70e63a0b57744c9b41d33 248 PIRSF PIRSF017388 1 246 1.8E-96 T 12-10-2018 IPR012354 Esterase/lipase GO:0052689 N288_15640 59d58e8770132baf0cbe8d8c9baae660 214 Pfam PF03475 3-alpha domain 170 208 2.4E-7 T 12-10-2018 IPR005163 3-alpha domain N288_15640 59d58e8770132baf0cbe8d8c9baae660 214 Pfam PF03473 MOSC domain 50 157 1.0E-17 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 N288_15640 59d58e8770132baf0cbe8d8c9baae660 214 SUPERFAMILY SSF50800 1 211 6.28E-61 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily N288_15640 59d58e8770132baf0cbe8d8c9baae660 214 Gene3D G3DSA:2.40.33.20 1 213 2.9E-63 T 12-10-2018 N288_18250 d64703a90a7ad3230bba1cd8fb8521fb 586 Gene3D G3DSA:1.10.287.950 294 585 2.3E-54 T 12-10-2018 N288_18250 d64703a90a7ad3230bba1cd8fb8521fb 586 SMART SM00304 228 281 1.0E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_18250 d64703a90a7ad3230bba1cd8fb8521fb 586 SMART SM00283 310 585 1.3E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_18250 d64703a90a7ad3230bba1cd8fb8521fb 586 Gene3D G3DSA:1.20.1480.50 193 287 1.5E-10 T 12-10-2018 N288_18250 d64703a90a7ad3230bba1cd8fb8521fb 586 SUPERFAMILY SSF58104 260 584 3.53E-57 T 12-10-2018 N288_18250 d64703a90a7ad3230bba1cd8fb8521fb 586 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 358 513 1.1E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_23180 49e3015e55bbb9e5fad4d0b13ab864df 70 Gene3D G3DSA:3.40.1090.10 3 67 4.3E-8 T 12-10-2018 N288_23180 49e3015e55bbb9e5fad4d0b13ab864df 70 SUPERFAMILY SSF52151 6 59 1.6E-12 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase N288_23180 49e3015e55bbb9e5fad4d0b13ab864df 70 Pfam PF01734 Patatin-like phospholipase 7 66 3.3E-8 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 N288_16705 2156fecc25262cf4576af67a5dbad919 302 Pfam PF00892 EamA-like transporter family 152 286 5.2E-26 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_16705 2156fecc25262cf4576af67a5dbad919 302 Pfam PF00892 EamA-like transporter family 6 140 5.7E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_16705 2156fecc25262cf4576af67a5dbad919 302 SUPERFAMILY SSF103481 47 142 4.84E-14 T 12-10-2018 N288_16705 2156fecc25262cf4576af67a5dbad919 302 SUPERFAMILY SSF103481 187 291 3.01E-15 T 12-10-2018 N288_25970 152c7e39c8d3d003b1f0d1eb62735b2b 212 Pfam PF06866 Protein of unknown function (DUF1256) 18 180 4.3E-65 T 12-10-2018 IPR009665 Protein of unknown function DUF1256 N288_25970 152c7e39c8d3d003b1f0d1eb62735b2b 212 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 43 182 2.8E-67 T 12-10-2018 IPR009665 Protein of unknown function DUF1256 N288_25970 152c7e39c8d3d003b1f0d1eb62735b2b 212 SUPERFAMILY SSF53163 15 202 3.66E-55 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily N288_10025 445883855660c40f9ee84262d1e26623 414 Pfam PF13840 ACT domain 335 398 3.6E-22 T 12-10-2018 IPR027795 CASTOR, ACT domain N288_10025 445883855660c40f9ee84262d1e26623 414 SUPERFAMILY SSF53633 3 246 5.5E-66 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily N288_10025 445883855660c40f9ee84262d1e26623 414 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 N288_10025 445883855660c40f9ee84262d1e26623 414 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 402 4.3E-141 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 N288_10025 445883855660c40f9ee84262d1e26623 414 Gene3D G3DSA:3.40.1160.10 1 255 6.1E-81 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily N288_10025 445883855660c40f9ee84262d1e26623 414 Pfam PF00696 Amino acid kinase family 2 235 5.5E-45 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 N288_10025 445883855660c40f9ee84262d1e26623 414 SUPERFAMILY SSF55021 335 405 3.21E-17 T 12-10-2018 N288_10025 445883855660c40f9ee84262d1e26623 414 PIRSF PIRSF000726 61 408 1.0E-93 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 N288_10025 445883855660c40f9ee84262d1e26623 414 PIRSF PIRSF000726 1 61 3.9E-8 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 N288_10025 445883855660c40f9ee84262d1e26623 414 Gene3D G3DSA:3.30.2130.10 256 411 7.2E-37 T 12-10-2018 N288_10025 445883855660c40f9ee84262d1e26623 414 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 67 401 5.1E-96 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 N288_10025 445883855660c40f9ee84262d1e26623 414 SUPERFAMILY SSF55021 260 346 9.16E-17 T 12-10-2018 N288_16055 8bf54fee75eb84d31b4ca668fd994407 227 Gene3D G3DSA:1.10.10.10 131 226 2.1E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_16055 8bf54fee75eb84d31b4ca668fd994407 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 222 7.9E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_16055 8bf54fee75eb84d31b4ca668fd994407 227 SMART SM00448 4 114 4.3E-42 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_16055 8bf54fee75eb84d31b4ca668fd994407 227 SUPERFAMILY SSF52172 2 124 8.25E-42 T 12-10-2018 IPR011006 CheY-like superfamily N288_16055 8bf54fee75eb84d31b4ca668fd994407 227 Pfam PF00072 Response regulator receiver domain 6 114 3.7E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_16055 8bf54fee75eb84d31b4ca668fd994407 227 SMART SM00862 150 222 1.5E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_16055 8bf54fee75eb84d31b4ca668fd994407 227 Gene3D G3DSA:3.40.50.2300 1 130 8.5E-38 T 12-10-2018 N288_16055 8bf54fee75eb84d31b4ca668fd994407 227 SUPERFAMILY SSF46894 127 224 1.22E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_00880 e66baa95b06856bc0bce2399e4166dd3 314 Gene3D G3DSA:3.30.1360.10 17 221 2.0E-88 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00880 e66baa95b06856bc0bce2399e4166dd3 314 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 221 4.5E-24 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00880 e66baa95b06856bc0bce2399e4166dd3 314 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 59 152 2.3E-24 T 12-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00880 e66baa95b06856bc0bce2399e4166dd3 314 SMART SM00662 20 227 2.2E-105 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00880 e66baa95b06856bc0bce2399e4166dd3 314 Gene3D G3DSA:1.10.150.20 237 314 1.7E-34 T 12-10-2018 N288_00880 e66baa95b06856bc0bce2399e4166dd3 314 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 310 7.0E-26 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00880 e66baa95b06856bc0bce2399e4166dd3 314 SUPERFAMILY SSF56553 50 171 2.09E-43 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00880 e66baa95b06856bc0bce2399e4166dd3 314 Gene3D G3DSA:2.170.120.12 50 170 2.0E-88 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00880 e66baa95b06856bc0bce2399e4166dd3 314 SUPERFAMILY SSF55257 5 230 4.71E-33 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00880 e66baa95b06856bc0bce2399e4166dd3 314 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 313 37.331 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00880 e66baa95b06856bc0bce2399e4166dd3 314 SUPERFAMILY SSF47789 247 313 9.29E-25 T 12-10-2018 N288_00880 e66baa95b06856bc0bce2399e4166dd3 314 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 20 313 7.4E-126 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00880 e66baa95b06856bc0bce2399e4166dd3 314 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 240 305 2.4E-29 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_17370 e3c976674f71d0a0b8b31da5813606f3 249 Hamap MF_01805 Segregation and condensation protein A [scpA]. 3 247 27.072 T 12-10-2018 IPR003768 Segregation and condensation protein A N288_17370 e3c976674f71d0a0b8b31da5813606f3 249 Pfam PF02616 Segregation and condensation protein ScpA 20 244 1.3E-60 T 12-10-2018 IPR003768 Segregation and condensation protein A N288_21115 8bbc08dbe1e336e54d5fadad282ad418 147 Gene3D G3DSA:3.90.1010.10 2 147 3.5E-61 T 12-10-2018 N288_21115 8bbc08dbe1e336e54d5fadad282ad418 147 SUPERFAMILY SSF82649 2 143 6.07E-52 T 12-10-2018 N288_21115 8bbc08dbe1e336e54d5fadad282ad418 147 Pfam PF01592 NifU-like N terminal domain 10 129 5.5E-37 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 N288_21115 8bbc08dbe1e336e54d5fadad282ad418 147 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 6 141 1.5E-57 T 12-10-2018 N288_18975 f8a68feeecf9c09a895063f5f7b47bca 172 PIRSF PIRSF025624 22 171 6.2E-60 T 12-10-2018 IPR008310 UPF0735 ACT domain-containing protein N288_18975 f8a68feeecf9c09a895063f5f7b47bca 172 Hamap MF_00707 UPF0735 ACT domain-containing protein . 27 171 32.446 T 12-10-2018 IPR008310 UPF0735 ACT domain-containing protein N288_18975 f8a68feeecf9c09a895063f5f7b47bca 172 Pfam PF01842 ACT domain 95 158 1.1E-6 T 12-10-2018 IPR002912 ACT domain N288_18975 f8a68feeecf9c09a895063f5f7b47bca 172 SUPERFAMILY SSF55021 95 168 4.58E-11 T 12-10-2018 N288_18975 f8a68feeecf9c09a895063f5f7b47bca 172 Gene3D G3DSA:3.30.70.260 93 170 1.5E-5 T 12-10-2018 N288_18215 6439610aed5b60042460e2d706a43cdb 706 SUPERFAMILY SSF56519 40 300 2.75E-31 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 N288_18215 6439610aed5b60042460e2d706a43cdb 706 Pfam PF00905 Penicillin binding protein transpeptidase domain 333 662 2.7E-64 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 N288_18215 6439610aed5b60042460e2d706a43cdb 706 Gene3D G3DSA:1.10.10.1230 70 175 7.6E-227 T 12-10-2018 N288_18215 6439610aed5b60042460e2d706a43cdb 706 Gene3D G3DSA:3.90.1310.30 45 550 7.6E-227 T 12-10-2018 N288_18215 6439610aed5b60042460e2d706a43cdb 706 SUPERFAMILY SSF56601 301 670 4.51E-61 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_18215 6439610aed5b60042460e2d706a43cdb 706 Gene3D G3DSA:3.40.710.10 300 648 7.6E-227 T 12-10-2018 N288_18215 6439610aed5b60042460e2d706a43cdb 706 Pfam PF03717 Penicillin-binding Protein dimerisation domain 43 285 1.3E-35 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 N288_18970 7857ede1b685560e81c6c231d642ce99 292 PIRSF PIRSF001500 1 280 1.3E-68 T 12-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 N288_18970 7857ede1b685560e81c6c231d642ce99 292 SUPERFAMILY SSF55021 178 277 3.66E-24 T 12-10-2018 N288_18970 7857ede1b685560e81c6c231d642ce99 292 Gene3D G3DSA:3.40.190.10 83 172 5.4E-53 T 12-10-2018 N288_18970 7857ede1b685560e81c6c231d642ce99 292 SUPERFAMILY SSF53850 1 189 2.12E-53 T 12-10-2018 N288_18970 7857ede1b685560e81c6c231d642ce99 292 Gene3D G3DSA:3.30.70.260 191 280 2.2E-25 T 12-10-2018 N288_18970 7857ede1b685560e81c6c231d642ce99 292 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 225 232 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 N288_18970 7857ede1b685560e81c6c231d642ce99 292 Pfam PF01842 ACT domain 203 252 3.6E-7 T 12-10-2018 IPR002912 ACT domain N288_18970 7857ede1b685560e81c6c231d642ce99 292 Gene3D G3DSA:3.40.190.10 5 181 5.4E-53 T 12-10-2018 N288_18970 7857ede1b685560e81c6c231d642ce99 292 Pfam PF00800 Prephenate dehydratase 4 184 4.1E-57 T 12-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 N288_04520 d6bcb8f617de8cb5f591d4456eb8ef37 334 Pfam PF00571 CBS domain 75 130 0.007 T 12-10-2018 IPR000644 CBS domain N288_04520 d6bcb8f617de8cb5f591d4456eb8ef37 334 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 143 237 5.6E-14 T 12-10-2018 IPR000160 GGDEF domain N288_04520 d6bcb8f617de8cb5f591d4456eb8ef37 334 SMART SM00267 127 313 3.8E-9 T 12-10-2018 IPR000160 GGDEF domain N288_04520 d6bcb8f617de8cb5f591d4456eb8ef37 334 Gene3D G3DSA:3.10.580.10 5 140 7.4E-11 T 12-10-2018 N288_04520 d6bcb8f617de8cb5f591d4456eb8ef37 334 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 242 9.5E-16 T 12-10-2018 IPR000160 GGDEF domain N288_04520 d6bcb8f617de8cb5f591d4456eb8ef37 334 SUPERFAMILY SSF55073 143 315 1.61E-20 T 12-10-2018 IPR029787 Nucleotide cyclase N288_04520 d6bcb8f617de8cb5f591d4456eb8ef37 334 SUPERFAMILY SSF54631 8 132 2.93E-9 T 12-10-2018 N288_04520 d6bcb8f617de8cb5f591d4456eb8ef37 334 Gene3D G3DSA:3.30.70.270 141 328 5.8E-23 T 12-10-2018 N288_13480 b0c2d2294f9caf2e5642a4bbf142c249 304 SMART SM00382 28 206 2.8E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_13480 b0c2d2294f9caf2e5642a4bbf142c249 304 Pfam PF00005 ABC transporter 19 158 2.2E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_13480 b0c2d2294f9caf2e5642a4bbf142c249 304 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_13480 b0c2d2294f9caf2e5642a4bbf142c249 304 Gene3D G3DSA:3.40.50.300 1 232 9.6E-59 T 12-10-2018 N288_13480 b0c2d2294f9caf2e5642a4bbf142c249 304 SUPERFAMILY SSF52540 3 218 5.1E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_13480 b0c2d2294f9caf2e5642a4bbf142c249 304 Pfam PF13732 Domain of unknown function (DUF4162) 211 288 4.4E-7 T 12-10-2018 IPR025302 Domain of unknown function DUF4162 N288_20200 7fcc98025b3bb5f0713f751c79b4aec2 267 SUPERFAMILY SSF53474 5 257 1.98E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_20200 7fcc98025b3bb5f0713f751c79b4aec2 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 3.4E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_20200 7fcc98025b3bb5f0713f751c79b4aec2 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 86 99 3.4E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_20200 7fcc98025b3bb5f0713f751c79b4aec2 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 38 53 3.4E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_20200 7fcc98025b3bb5f0713f751c79b4aec2 267 Pfam PF12146 Serine aminopeptidase, S33 9 244 4.8E-55 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 N288_20200 7fcc98025b3bb5f0713f751c79b4aec2 267 Gene3D G3DSA:3.40.50.1820 1 262 2.7E-52 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_10775 a3f3c2dcc933cb891dda52453d2bfcaa 478 SUPERFAMILY SSF51556 3 465 4.76E-182 T 12-10-2018 IPR032466 Metal-dependent hydrolase N288_10775 a3f3c2dcc933cb891dda52453d2bfcaa 478 Pfam PF02614 Glucuronate isomerase 1 464 1.5E-232 T 12-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 N288_10775 a3f3c2dcc933cb891dda52453d2bfcaa 478 Hamap MF_00675 Uronate isomerase [uxaC]. 2 466 49.931 T 12-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 N288_10775 a3f3c2dcc933cb891dda52453d2bfcaa 478 Gene3D G3DSA:1.10.2020.10 46 136 2.2E-194 T 12-10-2018 N288_10775 a3f3c2dcc933cb891dda52453d2bfcaa 478 Gene3D G3DSA:3.20.20.140 7 464 2.2E-194 T 12-10-2018 N288_20940 6b5e6e47da8a88d4562e1e609780efba 121 Gene3D G3DSA:2.60.300.12 5 114 5.8E-36 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 N288_20940 6b5e6e47da8a88d4562e1e609780efba 121 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 92 109 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 N288_20940 6b5e6e47da8a88d4562e1e609780efba 121 Pfam PF01521 Iron-sulphur cluster biosynthesis 6 106 2.4E-21 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 N288_20940 6b5e6e47da8a88d4562e1e609780efba 121 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 6 110 2.0E-36 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 N288_20940 6b5e6e47da8a88d4562e1e609780efba 121 SUPERFAMILY SSF89360 3 97 2.16E-29 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 N288_07460 24dd4762973f46720dd873037d60127f 112 Gene3D G3DSA:3.40.1260.10 6 110 1.2E-6 T 12-10-2018 IPR027396 DsrEFH-like N288_07460 24dd4762973f46720dd873037d60127f 112 Pfam PF02635 DsrE/DsrF-like family 33 106 2.1E-6 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein N288_07460 24dd4762973f46720dd873037d60127f 112 SUPERFAMILY SSF75169 12 104 2.22E-15 T 12-10-2018 IPR027396 DsrEFH-like N288_20680 965afaf6e03db319f3c4584f9966f7c3 467 Gene3D G3DSA:3.40.50.300 135 313 6.3E-61 T 12-10-2018 N288_20680 965afaf6e03db319f3c4584f9966f7c3 467 Gene3D G3DSA:1.10.8.60 314 380 7.5E-22 T 12-10-2018 N288_20680 965afaf6e03db319f3c4584f9966f7c3 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 N288_20680 965afaf6e03db319f3c4584f9966f7c3 467 SMART SM00382 164 306 6.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_20680 965afaf6e03db319f3c4584f9966f7c3 467 Gene3D G3DSA:1.10.10.60 410 461 1.3E-14 T 12-10-2018 N288_20680 965afaf6e03db319f3c4584f9966f7c3 467 Pfam PF02954 Bacterial regulatory protein, Fis family 419 458 1.1E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 N288_20680 965afaf6e03db319f3c4584f9966f7c3 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site N288_20680 965afaf6e03db319f3c4584f9966f7c3 467 Pfam PF00158 Sigma-54 interaction domain 144 309 1.9E-63 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 N288_20680 965afaf6e03db319f3c4584f9966f7c3 467 Gene3D G3DSA:3.30.450.20 2 134 1.4E-13 T 12-10-2018 N288_20680 965afaf6e03db319f3c4584f9966f7c3 467 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 127 1.6E-13 T 12-10-2018 IPR000014 PAS domain N288_20680 965afaf6e03db319f3c4584f9966f7c3 467 SUPERFAMILY SSF46689 356 460 2.37E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_20680 965afaf6e03db319f3c4584f9966f7c3 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 N288_20680 965afaf6e03db319f3c4584f9966f7c3 467 SUPERFAMILY SSF52540 143 380 1.0E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_20680 965afaf6e03db319f3c4584f9966f7c3 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 441 461 3.1E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 N288_20680 965afaf6e03db319f3c4584f9966f7c3 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 424 441 3.1E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 N288_20680 965afaf6e03db319f3c4584f9966f7c3 467 SMART SM00091 11 76 1.0E-5 T 12-10-2018 IPR000014 PAS domain N288_20680 965afaf6e03db319f3c4584f9966f7c3 467 SUPERFAMILY SSF55785 13 114 1.1E-14 T 12-10-2018 IPR035965 PAS domain superfamily N288_20680 965afaf6e03db319f3c4584f9966f7c3 467 Pfam PF08448 PAS fold 17 122 5.4E-10 T 12-10-2018 IPR013656 PAS fold-4 N288_00135 dbf85ca90bb2fe4edf3cd809ee60ebe2 175 SUPERFAMILY SSF53927 4 156 2.17E-53 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 N288_00135 dbf85ca90bb2fe4edf3cd809ee60ebe2 175 Pfam PF14437 MafB19-like deaminase 6 152 3.3E-41 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 N288_00135 dbf85ca90bb2fe4edf3cd809ee60ebe2 175 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 93 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 N288_00135 dbf85ca90bb2fe4edf3cd809ee60ebe2 175 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 11 152 46.237 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 N288_00135 dbf85ca90bb2fe4edf3cd809ee60ebe2 175 Gene3D G3DSA:3.40.140.10 2 169 1.0E-62 T 12-10-2018 N288_05620 bbe136536bfccc99359b34991925bbb3 224 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 182 0.0029 T 12-10-2018 N288_05620 bbe136536bfccc99359b34991925bbb3 224 Gene3D G3DSA:3.40.50.720 2 222 1.0E-55 T 12-10-2018 N288_05620 bbe136536bfccc99359b34991925bbb3 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.9E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05620 bbe136536bfccc99359b34991925bbb3 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.9E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05620 bbe136536bfccc99359b34991925bbb3 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.9E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05620 bbe136536bfccc99359b34991925bbb3 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.9E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05620 bbe136536bfccc99359b34991925bbb3 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.9E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05620 bbe136536bfccc99359b34991925bbb3 224 SUPERFAMILY SSF51735 3 210 3.53E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_05620 bbe136536bfccc99359b34991925bbb3 224 Pfam PF00106 short chain dehydrogenase 3 188 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05620 bbe136536bfccc99359b34991925bbb3 224 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_20305 65f9a5a49101ef225367ab18cd7105eb 256 SMART SM00382 32 213 5.7E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_20305 65f9a5a49101ef225367ab18cd7105eb 256 Pfam PF00005 ABC transporter 23 162 5.4E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_20305 65f9a5a49101ef225367ab18cd7105eb 256 Gene3D G3DSA:3.40.50.300 2 246 3.5E-61 T 12-10-2018 N288_20305 65f9a5a49101ef225367ab18cd7105eb 256 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_20305 65f9a5a49101ef225367ab18cd7105eb 256 SUPERFAMILY SSF52540 4 218 4.31E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_16385 1a285b380ef30da4a0b2415b618582aa 547 Pfam PF14266 Putative component of 'biosynthetic module' 43 530 2.5E-164 T 12-10-2018 IPR025647 Putative component of 'biosynthetic module' N288_12880 34c1d0a2f156f18efa16f26df5db8092 579 SUPERFAMILY SSF52540 147 396 3.85E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_12880 34c1d0a2f156f18efa16f26df5db8092 579 Gene3D G3DSA:3.40.50.300 139 320 3.5E-58 T 12-10-2018 N288_12880 34c1d0a2f156f18efa16f26df5db8092 579 Gene3D G3DSA:1.20.58.760 402 577 1.3E-39 T 12-10-2018 N288_12880 34c1d0a2f156f18efa16f26df5db8092 579 SUPERFAMILY SSF140990 403 568 6.02E-37 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 N288_12880 34c1d0a2f156f18efa16f26df5db8092 579 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 189 318 1.1E-40 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 N288_12880 34c1d0a2f156f18efa16f26df5db8092 579 Pfam PF01434 Peptidase family M41 382 500 7.8E-30 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 N288_12880 34c1d0a2f156f18efa16f26df5db8092 579 SMART SM00382 185 321 5.3E-23 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_12880 34c1d0a2f156f18efa16f26df5db8092 579 Gene3D G3DSA:1.10.8.60 321 399 1.4E-19 T 12-10-2018 N288_16890 5ca6be4869e3e8d73a856505cb535fa2 282 Gene3D G3DSA:3.40.50.620 1 178 4.8E-73 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_16890 5ca6be4869e3e8d73a856505cb535fa2 282 SUPERFAMILY SSF52374 1 280 2.16E-100 T 12-10-2018 N288_16890 5ca6be4869e3e8d73a856505cb535fa2 282 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 1.4E-99 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 N288_16890 5ca6be4869e3e8d73a856505cb535fa2 282 Pfam PF02569 Pantoate-beta-alanine ligase 3 279 8.6E-100 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 N288_16890 5ca6be4869e3e8d73a856505cb535fa2 282 Gene3D G3DSA:3.30.1300.10 179 278 4.9E-30 T 12-10-2018 N288_16890 5ca6be4869e3e8d73a856505cb535fa2 282 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 38.362 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 N288_15680 7636b29d9326d52a1c1f600e7d62599c 177 Gene3D G3DSA:3.40.50.880 2 172 1.4E-31 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_15680 7636b29d9326d52a1c1f600e7d62599c 177 Pfam PF01965 DJ-1/PfpI family 4 162 3.8E-22 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 N288_15680 7636b29d9326d52a1c1f600e7d62599c 177 SUPERFAMILY SSF52317 1 166 2.62E-29 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_07545 9b4d03f35054a0a4d3ea3b3043f18d43 320 Gene3D G3DSA:3.40.50.2300 43 285 2.6E-80 T 12-10-2018 N288_07545 9b4d03f35054a0a4d3ea3b3043f18d43 320 SUPERFAMILY SSF53822 31 267 4.59E-15 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_07545 9b4d03f35054a0a4d3ea3b3043f18d43 320 Gene3D G3DSA:3.40.50.2300 135 301 2.6E-80 T 12-10-2018 N288_07545 9b4d03f35054a0a4d3ea3b3043f18d43 320 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 31 316 2.5E-57 T 12-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 N288_03880 d656fe7b6d8c9b32b9a08abf1e32658f 371 Pfam PF08756 YfkB-like domain 219 368 1.0E-79 T 12-10-2018 IPR014866 YfkB-like domain N288_03880 d656fe7b6d8c9b32b9a08abf1e32658f 371 SUPERFAMILY SSF102114 32 328 1.18E-27 T 12-10-2018 N288_03880 d656fe7b6d8c9b32b9a08abf1e32658f 371 Pfam PF13353 4Fe-4S single cluster domain 40 113 5.0E-6 T 12-10-2018 N288_03880 d656fe7b6d8c9b32b9a08abf1e32658f 371 TIGRFAM TIGR04478 rSAM_YfkAB: radical SAM/CxCxxxxC motif protein YfkAB 7 367 1.4E-192 T 12-10-2018 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB N288_03880 d656fe7b6d8c9b32b9a08abf1e32658f 371 Gene3D G3DSA:3.20.20.70 21 291 7.2E-22 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_03880 d656fe7b6d8c9b32b9a08abf1e32658f 371 Pfam PF04055 Radical SAM superfamily 35 187 1.1E-10 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 N288_05530 51bf49060efaeec511635e7140ae84fa 288 SUPERFAMILY SSF161098 50 275 4.32E-61 T 12-10-2018 IPR035906 MetI-like superfamily N288_05530 51bf49060efaeec511635e7140ae84fa 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 286 4.6E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_05530 51bf49060efaeec511635e7140ae84fa 288 Gene3D G3DSA:1.10.3720.10 45 286 3.0E-70 T 12-10-2018 IPR035906 MetI-like superfamily N288_24310 12e797e28e9a0831aa9ccb672c3ecbfe 398 SUPERFAMILY SSF53067 12 204 4.14E-8 T 12-10-2018 N288_24310 12e797e28e9a0831aa9ccb672c3ecbfe 398 Pfam PF06406 StbA protein 182 348 1.5E-7 T 12-10-2018 IPR009440 Plasmid segregation protein ParM/StbA N288_24310 12e797e28e9a0831aa9ccb672c3ecbfe 398 Gene3D G3DSA:3.30.420.40 14 211 2.6E-24 T 12-10-2018 N288_24310 12e797e28e9a0831aa9ccb672c3ecbfe 398 Gene3D G3DSA:3.30.420.40 212 347 2.6E-24 T 12-10-2018 N288_24310 12e797e28e9a0831aa9ccb672c3ecbfe 398 SUPERFAMILY SSF53067 215 348 1.19E-14 T 12-10-2018 N288_21885 38a4c3fc59893c521d39dc54cfa0c23e 484 Pfam PF01471 Putative peptidoglycan binding domain 403 458 1.4E-17 T 12-10-2018 IPR002477 Peptidoglycan binding-like N288_21885 38a4c3fc59893c521d39dc54cfa0c23e 484 Gene3D G3DSA:3.30.750.44 70 356 4.1E-89 T 12-10-2018 N288_21885 38a4c3fc59893c521d39dc54cfa0c23e 484 Gene3D G3DSA:3.90.226.10 203 378 4.1E-89 T 12-10-2018 N288_21885 38a4c3fc59893c521d39dc54cfa0c23e 484 SUPERFAMILY SSF47090 391 459 4.4E-17 T 12-10-2018 IPR036365 PGBD-like superfamily N288_21885 38a4c3fc59893c521d39dc54cfa0c23e 484 Gene3D G3DSA:1.10.101.10 393 462 8.1E-16 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 N288_21885 38a4c3fc59893c521d39dc54cfa0c23e 484 SMART SM00245 190 381 1.1E-62 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 N288_21885 38a4c3fc59893c521d39dc54cfa0c23e 484 Pfam PF13180 PDZ domain 118 197 6.2E-15 T 12-10-2018 IPR001478 PDZ domain GO:0005515 N288_21885 38a4c3fc59893c521d39dc54cfa0c23e 484 SUPERFAMILY SSF50156 88 212 1.75E-23 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 N288_21885 38a4c3fc59893c521d39dc54cfa0c23e 484 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 71 386 9.7E-117 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 N288_21885 38a4c3fc59893c521d39dc54cfa0c23e 484 Gene3D G3DSA:2.30.42.10 117 202 4.1E-89 T 12-10-2018 N288_21885 38a4c3fc59893c521d39dc54cfa0c23e 484 Pfam PF03572 Peptidase family S41 218 380 8.8E-49 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 N288_21885 38a4c3fc59893c521d39dc54cfa0c23e 484 SUPERFAMILY SSF52096 57 385 1.21E-67 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_21885 38a4c3fc59893c521d39dc54cfa0c23e 484 SMART SM00228 117 188 6.1E-17 T 12-10-2018 IPR001478 PDZ domain GO:0005515 N288_18570 2cc5437b617b0e4c8f29313a624f1240 189 Gene3D G3DSA:1.10.3210.10 1 186 2.8E-59 T 12-10-2018 N288_18570 2cc5437b617b0e4c8f29313a624f1240 189 Pfam PF01966 HD domain 18 130 2.9E-18 T 12-10-2018 IPR006674 HD domain N288_18570 2cc5437b617b0e4c8f29313a624f1240 189 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 10 180 1.7E-68 T 12-10-2018 IPR005249 Conserved hypothetical protein CHP00488 N288_18570 2cc5437b617b0e4c8f29313a624f1240 189 SMART SM00471 14 141 1.1E-11 T 12-10-2018 IPR003607 HD/PDEase domain N288_18570 2cc5437b617b0e4c8f29313a624f1240 189 SUPERFAMILY SSF109604 3 184 2.33E-36 T 12-10-2018 N288_17175 f02dd2c84f0c5d54d80c2e56089b8954 425 Gene3D G3DSA:1.10.8.1210 379 425 9.0E-18 T 12-10-2018 N288_17175 f02dd2c84f0c5d54d80c2e56089b8954 425 SMART SM00839 194 423 1.1E-94 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_17175 f02dd2c84f0c5d54d80c2e56089b8954 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 183 205 7.1E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_17175 f02dd2c84f0c5d54d80c2e56089b8954 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 225 245 7.1E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_17175 f02dd2c84f0c5d54d80c2e56089b8954 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 351 362 7.1E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_17175 f02dd2c84f0c5d54d80c2e56089b8954 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 103 117 7.1E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_17175 f02dd2c84f0c5d54d80c2e56089b8954 425 SUPERFAMILY SSF53223 17 194 6.72E-66 T 12-10-2018 N288_17175 f02dd2c84f0c5d54d80c2e56089b8954 425 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 192 423 5.4E-78 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_17175 f02dd2c84f0c5d54d80c2e56089b8954 425 PIRSF PIRSF000185 11 425 2.2E-173 T 12-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 N288_17175 f02dd2c84f0c5d54d80c2e56089b8954 425 Gene3D G3DSA:3.40.50.720 199 352 1.6E-142 T 12-10-2018 N288_17175 f02dd2c84f0c5d54d80c2e56089b8954 425 SUPERFAMILY SSF51735 192 424 1.4E-77 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_17175 f02dd2c84f0c5d54d80c2e56089b8954 425 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 48 174 1.1E-53 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_17175 f02dd2c84f0c5d54d80c2e56089b8954 425 Gene3D G3DSA:3.40.50.10860 44 198 1.6E-142 T 12-10-2018 N288_17175 f02dd2c84f0c5d54d80c2e56089b8954 425 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 111 124 - T 12-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_17175 f02dd2c84f0c5d54d80c2e56089b8954 425 Gene3D G3DSA:1.10.8.1210 25 353 1.6E-142 T 12-10-2018 N288_11605 41564513c0d932391839039d88a23f85 321 Gene3D G3DSA:3.40.250.10 103 252 1.9E-45 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_11605 41564513c0d932391839039d88a23f85 321 SUPERFAMILY SSF52821 89 248 1.29E-34 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_11605 41564513c0d932391839039d88a23f85 321 Pfam PF12368 Rhodanase C-terminal 223 289 5.2E-14 T 12-10-2018 IPR022111 Rhodanase, C-terminal N288_11605 41564513c0d932391839039d88a23f85 321 SMART SM00450 116 217 1.4E-18 T 12-10-2018 IPR001763 Rhodanese-like domain N288_11605 41564513c0d932391839039d88a23f85 321 Hamap MF_00469 UPF0176 protein YceA [yceA]. 4 268 39.823 T 12-10-2018 IPR020936 Uncharacterised protein family UPF0176 N288_11605 41564513c0d932391839039d88a23f85 321 Pfam PF00581 Rhodanese-like domain 118 211 2.4E-11 T 12-10-2018 IPR001763 Rhodanese-like domain N288_11605 41564513c0d932391839039d88a23f85 321 Gene3D G3DSA:3.30.70.100 1 98 1.0E-29 T 12-10-2018 N288_09160 6780fc1f3be87c1f406f8cb41989b514 747 SUPERFAMILY SSF54184 665 717 8.76E-12 T 12-10-2018 N288_09160 6780fc1f3be87c1f406f8cb41989b514 747 SUPERFAMILY SSF56601 198 621 1.62E-97 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_09160 6780fc1f3be87c1f406f8cb41989b514 747 Gene3D G3DSA:3.30.10.20 607 660 1.7E-5 T 12-10-2018 N288_09160 6780fc1f3be87c1f406f8cb41989b514 747 SUPERFAMILY SSF54184 606 661 1.96E-12 T 12-10-2018 N288_09160 6780fc1f3be87c1f406f8cb41989b514 747 Pfam PF03793 PASTA domain 607 660 8.2E-10 T 12-10-2018 IPR005543 PASTA domain N288_09160 6780fc1f3be87c1f406f8cb41989b514 747 Pfam PF03793 PASTA domain 666 715 1.5E-8 T 12-10-2018 IPR005543 PASTA domain N288_09160 6780fc1f3be87c1f406f8cb41989b514 747 Gene3D G3DSA:2.20.70.70 55 234 2.0E-59 T 12-10-2018 N288_09160 6780fc1f3be87c1f406f8cb41989b514 747 Pfam PF03717 Penicillin-binding Protein dimerisation domain 59 227 1.9E-27 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 N288_09160 6780fc1f3be87c1f406f8cb41989b514 747 SMART SM00740 602 662 5.2E-12 T 12-10-2018 IPR005543 PASTA domain N288_09160 6780fc1f3be87c1f406f8cb41989b514 747 SMART SM00740 663 719 0.0051 T 12-10-2018 IPR005543 PASTA domain N288_09160 6780fc1f3be87c1f406f8cb41989b514 747 Gene3D G3DSA:3.90.1310.10 60 214 2.0E-59 T 12-10-2018 N288_09160 6780fc1f3be87c1f406f8cb41989b514 747 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 587 3.9E-84 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 N288_09160 6780fc1f3be87c1f406f8cb41989b514 747 SUPERFAMILY SSF56519 55 247 2.09E-45 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 N288_09160 6780fc1f3be87c1f406f8cb41989b514 747 Gene3D G3DSA:3.30.70.2110 79 162 2.0E-59 T 12-10-2018 N288_09160 6780fc1f3be87c1f406f8cb41989b514 747 Gene3D G3DSA:3.40.710.10 241 601 1.7E-102 T 12-10-2018 N288_24115 9f63a7eef9d77d132695458ea080c7d3 198 SUPERFAMILY SSF53448 1 152 1.42E-29 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_24115 9f63a7eef9d77d132695458ea080c7d3 198 Pfam PF12804 MobA-like NTP transferase domain 5 156 8.7E-34 T 12-10-2018 IPR025877 MobA-like NTP transferase N288_24115 9f63a7eef9d77d132695458ea080c7d3 198 Gene3D G3DSA:3.90.550.10 1 194 2.1E-52 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_24115 9f63a7eef9d77d132695458ea080c7d3 198 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 190 23.699 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 N288_16025 913fc73077332d611da0475fd0346b94 260 Gene3D G3DSA:3.40.50.720 2 256 1.3E-64 T 12-10-2018 N288_16025 913fc73077332d611da0475fd0346b94 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.4E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_16025 913fc73077332d611da0475fd0346b94 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.4E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_16025 913fc73077332d611da0475fd0346b94 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.4E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_16025 913fc73077332d611da0475fd0346b94 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.4E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_16025 913fc73077332d611da0475fd0346b94 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.4E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_16025 913fc73077332d611da0475fd0346b94 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.4E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_16025 913fc73077332d611da0475fd0346b94 260 SUPERFAMILY SSF51735 5 249 3.48E-61 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_16025 913fc73077332d611da0475fd0346b94 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 248 5.9E-44 T 12-10-2018 N288_16025 913fc73077332d611da0475fd0346b94 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 4.1E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_16025 913fc73077332d611da0475fd0346b94 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.1E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10995 e921d5d0b9f0990cb24bfc74b9a7fcae 763 Pfam PF00270 DEAD/DEAH box helicase 200 270 1.2E-5 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 N288_10995 e921d5d0b9f0990cb24bfc74b9a7fcae 763 Gene3D G3DSA:3.90.320.10 8 153 3.0E-9 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal N288_10995 e921d5d0b9f0990cb24bfc74b9a7fcae 763 SUPERFAMILY SSF52540 171 406 4.9E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_10995 e921d5d0b9f0990cb24bfc74b9a7fcae 763 Gene3D G3DSA:1.10.275.40 392 513 5.7E-48 T 12-10-2018 N288_10995 e921d5d0b9f0990cb24bfc74b9a7fcae 763 SMART SM00491 608 744 4.3E-21 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 N288_10995 e921d5d0b9f0990cb24bfc74b9a7fcae 763 Pfam PF06733 DEAD_2 274 397 7.0E-14 T 12-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 N288_10995 e921d5d0b9f0990cb24bfc74b9a7fcae 763 SUPERFAMILY SSF52540 585 757 1.31E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_10995 e921d5d0b9f0990cb24bfc74b9a7fcae 763 SMART SM00487 187 441 0.0075 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_10995 e921d5d0b9f0990cb24bfc74b9a7fcae 763 SMART SM00488 184 435 4.0E-5 T 12-10-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 N288_10995 e921d5d0b9f0990cb24bfc74b9a7fcae 763 Gene3D G3DSA:3.40.50.300 201 546 5.7E-48 T 12-10-2018 N288_10995 e921d5d0b9f0990cb24bfc74b9a7fcae 763 Gene3D G3DSA:1.10.30.20 276 335 5.7E-48 T 12-10-2018 N288_10995 e921d5d0b9f0990cb24bfc74b9a7fcae 763 Pfam PF12705 PD-(D/E)XK nuclease superfamily 40 174 5.6E-7 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type N288_10995 e921d5d0b9f0990cb24bfc74b9a7fcae 763 Gene3D G3DSA:3.40.50.300 562 760 7.0E-52 T 12-10-2018 N288_10995 e921d5d0b9f0990cb24bfc74b9a7fcae 763 Pfam PF13307 Helicase C-terminal domain 592 755 1.6E-38 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 N288_10290 d19ead178a7e8e90bbf8f11132cdc317 229 SUPERFAMILY SSF54106 184 228 7.06E-11 T 12-10-2018 N288_10290 d19ead178a7e8e90bbf8f11132cdc317 229 SMART SM00646 64 172 8.0E-46 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 N288_10290 d19ead178a7e8e90bbf8f11132cdc317 229 SMART SM00257 185 229 1.7E-12 T 12-10-2018 IPR018392 LysM domain N288_10290 d19ead178a7e8e90bbf8f11132cdc317 229 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 4 172 8.4E-43 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 N288_10290 d19ead178a7e8e90bbf8f11132cdc317 229 Gene3D G3DSA:3.10.350.10 181 229 9.8E-17 T 12-10-2018 IPR036779 LysM domain superfamily N288_10290 d19ead178a7e8e90bbf8f11132cdc317 229 SUPERFAMILY SSF53187 1 178 7.53E-53 T 12-10-2018 N288_10290 d19ead178a7e8e90bbf8f11132cdc317 229 Pfam PF01476 LysM domain 186 228 6.3E-14 T 12-10-2018 IPR018392 LysM domain N288_10290 d19ead178a7e8e90bbf8f11132cdc317 229 Gene3D G3DSA:3.40.630.40 1 174 6.2E-56 T 12-10-2018 N288_13775 64ac4a3ae631339d042f4cd40601296a 295 SMART SM00871 128 288 3.4E-30 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding N288_13775 64ac4a3ae631339d042f4cd40601296a 295 Pfam PF12833 Helix-turn-helix domain 28 105 3.1E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_13775 64ac4a3ae631339d042f4cd40601296a 295 Gene3D G3DSA:3.20.80.10 128 293 4.4E-37 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily N288_13775 64ac4a3ae631339d042f4cd40601296a 295 SUPERFAMILY SSF55136 128 289 7.06E-27 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily N288_13775 64ac4a3ae631339d042f4cd40601296a 295 Gene3D G3DSA:1.10.10.60 4 57 6.4E-12 T 12-10-2018 N288_13775 64ac4a3ae631339d042f4cd40601296a 295 SUPERFAMILY SSF46689 57 115 1.03E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_13775 64ac4a3ae631339d042f4cd40601296a 295 SMART SM00342 21 104 5.1E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_13775 64ac4a3ae631339d042f4cd40601296a 295 SUPERFAMILY SSF46689 5 55 9.41E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_13775 64ac4a3ae631339d042f4cd40601296a 295 Pfam PF06445 GyrI-like small molecule binding domain 128 287 1.3E-25 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain N288_13775 64ac4a3ae631339d042f4cd40601296a 295 Gene3D G3DSA:1.10.10.60 58 112 2.3E-13 T 12-10-2018 N288_11510 ef59d3544815f92aa49b026e0a511fcc 368 SUPERFAMILY SSF51735 139 349 1.46E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_11510 ef59d3544815f92aa49b026e0a511fcc 368 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 130 152 3.0E-20 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_11510 ef59d3544815f92aa49b026e0a511fcc 368 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 64 78 3.0E-20 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_11510 ef59d3544815f92aa49b026e0a511fcc 368 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 174 194 3.0E-20 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_11510 ef59d3544815f92aa49b026e0a511fcc 368 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 289 300 3.0E-20 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_11510 ef59d3544815f92aa49b026e0a511fcc 368 Gene3D G3DSA:3.40.50.720 132 339 5.1E-133 T 12-10-2018 N288_11510 ef59d3544815f92aa49b026e0a511fcc 368 SMART SM00839 145 354 1.4E-47 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_11510 ef59d3544815f92aa49b026e0a511fcc 368 SUPERFAMILY SSF53223 7 142 1.15E-47 T 12-10-2018 N288_11510 ef59d3544815f92aa49b026e0a511fcc 368 Gene3D G3DSA:3.40.50.10860 9 346 5.1E-133 T 12-10-2018 N288_11510 ef59d3544815f92aa49b026e0a511fcc 368 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 11 128 1.0E-25 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_11510 ef59d3544815f92aa49b026e0a511fcc 368 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 217 345 2.7E-9 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_11510 ef59d3544815f92aa49b026e0a511fcc 368 PIRSF PIRSF000188 1 356 3.2E-160 T 12-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 N288_11510 ef59d3544815f92aa49b026e0a511fcc 368 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 72 85 - T 12-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_11810 9b0e76c41dcbf0adb799bd36c5dc8758 481 Pfam PF01235 Sodium:alanine symporter family 63 454 1.2E-165 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_11810 9b0e76c41dcbf0adb799bd36c5dc8758 481 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 97 112 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_11810 9b0e76c41dcbf0adb799bd36c5dc8758 481 TIGRFAM TIGR00835 agcS: amino acid carrier protein 20 442 2.8E-162 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_11810 9b0e76c41dcbf0adb799bd36c5dc8758 481 PRINTS PR00175 Sodium/alanine symporter signature 97 119 4.2E-64 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_11810 9b0e76c41dcbf0adb799bd36c5dc8758 481 PRINTS PR00175 Sodium/alanine symporter signature 215 234 4.2E-64 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_11810 9b0e76c41dcbf0adb799bd36c5dc8758 481 PRINTS PR00175 Sodium/alanine symporter signature 187 205 4.2E-64 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_11810 9b0e76c41dcbf0adb799bd36c5dc8758 481 PRINTS PR00175 Sodium/alanine symporter signature 351 373 4.2E-64 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_11810 9b0e76c41dcbf0adb799bd36c5dc8758 481 PRINTS PR00175 Sodium/alanine symporter signature 411 431 4.2E-64 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_11810 9b0e76c41dcbf0adb799bd36c5dc8758 481 PRINTS PR00175 Sodium/alanine symporter signature 306 324 4.2E-64 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_12035 2eaad237079ab6a4f9d4841a61d147a8 1021 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 1 1008 13.358 T 12-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 N288_12035 2eaad237079ab6a4f9d4841a61d147a8 1021 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 5 824 3.6E-278 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 N288_12035 2eaad237079ab6a4f9d4841a61d147a8 1021 SUPERFAMILY SSF47323 648 868 2.24E-45 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_12035 2eaad237079ab6a4f9d4841a61d147a8 1021 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 542 551 1.4E-29 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 N288_12035 2eaad237079ab6a4f9d4841a61d147a8 1021 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 376 391 1.4E-29 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 N288_12035 2eaad237079ab6a4f9d4841a61d147a8 1021 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 34 45 1.4E-29 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 N288_12035 2eaad237079ab6a4f9d4841a61d147a8 1021 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 214 237 1.4E-29 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 N288_12035 2eaad237079ab6a4f9d4841a61d147a8 1021 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 502 515 1.4E-29 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 N288_12035 2eaad237079ab6a4f9d4841a61d147a8 1021 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 12 615 2.5E-184 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_12035 2eaad237079ab6a4f9d4841a61d147a8 1021 Gene3D G3DSA:3.90.740.10 190 382 5.9E-241 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 N288_12035 2eaad237079ab6a4f9d4841a61d147a8 1021 SUPERFAMILY SSF50677 192 378 8.58E-50 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 N288_12035 2eaad237079ab6a4f9d4841a61d147a8 1021 SUPERFAMILY SSF52374 4 629 5.63E-131 T 12-10-2018 N288_12035 2eaad237079ab6a4f9d4841a61d147a8 1021 Gene3D G3DSA:1.10.730.10 625 802 2.8E-45 T 12-10-2018 N288_12035 2eaad237079ab6a4f9d4841a61d147a8 1021 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 52 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_12035 2eaad237079ab6a4f9d4841a61d147a8 1021 Gene3D G3DSA:3.40.50.620 9 608 5.9E-241 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_12035 2eaad237079ab6a4f9d4841a61d147a8 1021 Pfam PF08264 Anticodon-binding domain of tRNA 667 810 9.4E-31 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 N288_04680 ddbed3211977a90b6c192c1531473889 46 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 22 45 6.1E-4 T 12-10-2018 N288_09860 9809da3c3273b7377c2bc848f4e24b6a 293 SUPERFAMILY SSF54713 55 143 1.31E-20 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 N288_09860 9809da3c3273b7377c2bc848f4e24b6a 293 Gene3D G3DSA:3.30.479.20 56 146 5.4E-23 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 N288_09860 9809da3c3273b7377c2bc848f4e24b6a 293 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 293 1.9E-116 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 N288_09860 9809da3c3273b7377c2bc848f4e24b6a 293 SUPERFAMILY SSF46934 3 54 2.13E-21 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 N288_09860 9809da3c3273b7377c2bc848f4e24b6a 293 Hamap MF_00050 Elongation factor Ts [tsf]. 1 291 81.161 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 N288_09860 9809da3c3273b7377c2bc848f4e24b6a 293 Pfam PF00889 Elongation factor TS 70 274 7.2E-75 T 12-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 N288_09860 9809da3c3273b7377c2bc848f4e24b6a 293 SUPERFAMILY SSF54713 151 292 6.93E-52 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 N288_09860 9809da3c3273b7377c2bc848f4e24b6a 293 Gene3D G3DSA:1.10.8.10 1 55 1.3E-28 T 12-10-2018 N288_09860 9809da3c3273b7377c2bc848f4e24b6a 293 Gene3D G3DSA:1.10.286.20 199 236 1.8E-20 T 12-10-2018 N288_09860 9809da3c3273b7377c2bc848f4e24b6a 293 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 N288_09860 9809da3c3273b7377c2bc848f4e24b6a 293 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 N288_01380 ee743f2a5c720e40e5c6225d34fdc8f8 698 Gene3D G3DSA:1.50.10.10 264 635 5.5E-57 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 N288_01380 ee743f2a5c720e40e5c6225d34fdc8f8 698 SUPERFAMILY SSF48208 211 681 2.47E-86 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 N288_01380 ee743f2a5c720e40e5c6225d34fdc8f8 698 Pfam PF06202 Amylo-alpha-1,6-glucosidase 269 625 1.8E-14 T 12-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 N288_01380 ee743f2a5c720e40e5c6225d34fdc8f8 698 Pfam PF14742 N-terminal domain of (some) glycogen debranching enzymes 6 197 1.8E-53 T 12-10-2018 IPR032856 Putative glycogen debranching enzyme, N-terminal N288_16290 38a1c6b2ef3e3a694afea3394d67d7bf 277 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 56 247 4.9E-31 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain N288_16290 38a1c6b2ef3e3a694afea3394d67d7bf 277 SUPERFAMILY SSF52266 48 256 3.24E-38 T 12-10-2018 N288_16290 38a1c6b2ef3e3a694afea3394d67d7bf 277 Gene3D G3DSA:3.40.50.1110 35 257 8.9E-40 T 12-10-2018 IPR036514 SGNH hydrolase superfamily N288_05785 8f0b5aace7e40b3116392cafdcfd612c 122 Pfam PF11023 Zinc-ribbon containing domain 3 113 2.5E-62 T 12-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 N288_05785 8f0b5aace7e40b3116392cafdcfd612c 122 ProDom PD355753 MEMBRANE TRANSMEMBRANE UPF0295 BLI00901/BL05075 BT9727_0449 GK0479 BCE0593 YGZB PRECURSOR BA0538/GBAA0538/BAS0506 1 113 2.0E-49 T 12-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 N288_05785 8f0b5aace7e40b3116392cafdcfd612c 122 Hamap MF_01502 UPF0295 protein . 1 115 36.398 T 12-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 N288_22940 ed6941c4cb6c2d2c0638e946b6bc9511 397 Gene3D G3DSA:1.20.1090.10 189 386 2.2E-67 T 12-10-2018 N288_22940 ed6941c4cb6c2d2c0638e946b6bc9511 397 SUPERFAMILY SSF56796 6 386 1.09E-125 T 12-10-2018 N288_22940 ed6941c4cb6c2d2c0638e946b6bc9511 397 Gene3D G3DSA:3.40.50.1970 2 187 6.5E-61 T 12-10-2018 N288_22940 ed6941c4cb6c2d2c0638e946b6bc9511 397 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 176 204 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 N288_22940 ed6941c4cb6c2d2c0638e946b6bc9511 397 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 378 7.7E-124 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 N288_05155 db463b08c7853a6badbb1e9d5de7617c 254 Gene3D G3DSA:3.40.630.30 5 153 8.4E-11 T 12-10-2018 N288_05155 db463b08c7853a6badbb1e9d5de7617c 254 Pfam PF00583 Acetyltransferase (GNAT) family 41 115 4.3E-5 T 12-10-2018 IPR000182 GNAT domain N288_05155 db463b08c7853a6badbb1e9d5de7617c 254 SUPERFAMILY SSF55729 39 144 2.02E-12 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_16130 3cfd8e2233e9f51e58f7303edfc4de4c 332 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 86 310 5.0E-40 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 N288_16130 3cfd8e2233e9f51e58f7303edfc4de4c 332 SUPERFAMILY SSF51695 81 310 2.27E-64 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 N288_16130 3cfd8e2233e9f51e58f7303edfc4de4c 332 Gene3D G3DSA:3.20.20.190 79 321 2.5E-67 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 N288_22885 ad34873e49d90d644a83fd26c565fc03 387 PIRSF PIRSF038994 5 381 5.7E-87 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 N288_22885 ad34873e49d90d644a83fd26c565fc03 387 SUPERFAMILY SSF51556 47 350 1.02E-67 T 12-10-2018 IPR032466 Metal-dependent hydrolase N288_22885 ad34873e49d90d644a83fd26c565fc03 387 Pfam PF01979 Amidohydrolase family 43 364 2.7E-12 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 N288_22885 ad34873e49d90d644a83fd26c565fc03 387 Gene3D G3DSA:3.20.20.140 47 352 3.3E-80 T 12-10-2018 N288_10540 f422abe17e05aee3aedf06e838d07380 646 Gene3D G3DSA:1.10.10.10 1 66 1.3E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_10540 f422abe17e05aee3aedf06e838d07380 646 Gene3D G3DSA:1.10.1790.10 188 288 3.8E-13 T 12-10-2018 N288_10540 f422abe17e05aee3aedf06e838d07380 646 Gene3D G3DSA:1.10.1790.10 302 404 6.7E-24 T 12-10-2018 N288_10540 f422abe17e05aee3aedf06e838d07380 646 Pfam PF08279 HTH domain 5 63 2.8E-11 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 N288_10540 f422abe17e05aee3aedf06e838d07380 646 Gene3D G3DSA:1.10.10.10 84 157 1.9E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_10540 f422abe17e05aee3aedf06e838d07380 646 SUPERFAMILY SSF63520 302 405 1.12E-23 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 N288_10540 f422abe17e05aee3aedf06e838d07380 646 Gene3D G3DSA:3.40.50.2300 412 499 2.2E-10 T 12-10-2018 N288_10540 f422abe17e05aee3aedf06e838d07380 646 SUPERFAMILY SSF52794 412 489 2.72E-7 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 N288_10540 f422abe17e05aee3aedf06e838d07380 646 Pfam PF00874 PRD domain 312 402 6.5E-21 T 12-10-2018 IPR011608 PRD domain GO:0006355 N288_10540 f422abe17e05aee3aedf06e838d07380 646 Pfam PF00874 PRD domain 206 284 7.7E-14 T 12-10-2018 IPR011608 PRD domain GO:0006355 N288_10540 f422abe17e05aee3aedf06e838d07380 646 Pfam PF05043 Mga helix-turn-helix domain 93 170 9.3E-15 T 12-10-2018 IPR007737 Mga helix-turn-helix domain N288_10540 f422abe17e05aee3aedf06e838d07380 646 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 507 641 1.1E-30 T 12-10-2018 IPR002178 PTS EIIA type-2 domain N288_10540 f422abe17e05aee3aedf06e838d07380 646 SUPERFAMILY SSF63520 185 286 5.36E-20 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 N288_10540 f422abe17e05aee3aedf06e838d07380 646 Gene3D G3DSA:3.40.930.10 504 644 1.1E-28 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 N288_10540 f422abe17e05aee3aedf06e838d07380 646 SUPERFAMILY SSF55804 507 643 4.58E-31 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 N288_20375 0dd82eeb0e37a2103fbe33a5f167e788 453 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 431 4.1E-122 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 N288_20375 0dd82eeb0e37a2103fbe33a5f167e788 453 PIRSF PIRSF006446 1 449 7.6E-112 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 N288_21375 6f14a67da30bb85d7aaaff6c53b2b1a9 266 SUPERFAMILY SSF81301 10 70 5.09E-8 T 12-10-2018 N288_21375 6f14a67da30bb85d7aaaff6c53b2b1a9 266 Pfam PF13427 Domain of unknown function (DUF4111) 168 233 4.5E-8 T 12-10-2018 IPR025184 Domain of unknown function DUF4111 N288_21375 6f14a67da30bb85d7aaaff6c53b2b1a9 266 Pfam PF01909 Nucleotidyltransferase domain 26 63 6.9E-5 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 N288_03000 ec8c07f9b3e3c7bac3daedd41f88377e 108 Pfam PF13396 Phospholipase_D-nuclease N-terminal 63 105 7.4E-14 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal N288_25580 bff3234e236d679fb34d676842c6e9dd 552 Gene3D G3DSA:1.10.1200.140 376 438 5.9E-129 T 12-10-2018 N288_25580 bff3234e236d679fb34d676842c6e9dd 552 PRINTS PR00113 Alkaline phosphatase signature 140 160 7.3E-32 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 N288_25580 bff3234e236d679fb34d676842c6e9dd 552 PRINTS PR00113 Alkaline phosphatase signature 184 194 7.3E-32 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 N288_25580 bff3234e236d679fb34d676842c6e9dd 552 PRINTS PR00113 Alkaline phosphatase signature 261 290 7.3E-32 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 N288_25580 bff3234e236d679fb34d676842c6e9dd 552 PRINTS PR00113 Alkaline phosphatase signature 42 62 7.3E-32 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 N288_25580 bff3234e236d679fb34d676842c6e9dd 552 SMART SM00098 43 464 4.5E-87 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 N288_25580 bff3234e236d679fb34d676842c6e9dd 552 SUPERFAMILY SSF53649 34 470 1.27E-115 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 N288_25580 bff3234e236d679fb34d676842c6e9dd 552 Pfam PF00245 Alkaline phosphatase 44 460 4.9E-94 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 N288_25580 bff3234e236d679fb34d676842c6e9dd 552 Gene3D G3DSA:3.40.720.10 44 441 5.9E-129 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 N288_18710 27d04a8937b27806ee7a47b8b2c64c60 212 SUPERFAMILY SSF53335 4 212 7.15E-43 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_18710 27d04a8937b27806ee7a47b8b2c64c60 212 Gene3D G3DSA:3.40.50.150 1 212 3.7E-62 T 12-10-2018 N288_18710 27d04a8937b27806ee7a47b8b2c64c60 212 Pfam PF01596 O-methyltransferase 26 211 1.3E-33 T 12-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 N288_05200 f59a3c0bb337dfc00dc7e06ad43eb6a8 413 Pfam PF01546 Peptidase family M20/M25/M40 80 407 2.4E-28 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_05200 f59a3c0bb337dfc00dc7e06ad43eb6a8 413 SUPERFAMILY SSF53187 10 409 2.63E-87 T 12-10-2018 N288_05200 f59a3c0bb337dfc00dc7e06ad43eb6a8 413 Pfam PF07687 Peptidase dimerisation domain 215 310 5.7E-8 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain N288_05200 f59a3c0bb337dfc00dc7e06ad43eb6a8 413 Gene3D G3DSA:3.30.70.360 215 328 2.3E-133 T 12-10-2018 N288_05200 f59a3c0bb337dfc00dc7e06ad43eb6a8 413 Gene3D G3DSA:3.40.630.10 17 404 2.3E-133 T 12-10-2018 N288_05200 f59a3c0bb337dfc00dc7e06ad43eb6a8 413 SUPERFAMILY SSF55031 215 322 1.13E-23 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_05200 f59a3c0bb337dfc00dc7e06ad43eb6a8 413 PIRSF PIRSF001235 5 413 2.6E-136 T 12-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 N288_05200 f59a3c0bb337dfc00dc7e06ad43eb6a8 413 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 11 406 1.1E-129 T 12-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 N288_23710 9a2f3e8745222c3eb6ee0c69c841e814 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 6 176 1.8E-50 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23710 9a2f3e8745222c3eb6ee0c69c841e814 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 6 176 1.8E-50 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23710 9a2f3e8745222c3eb6ee0c69c841e814 178 SUPERFAMILY SSF47928 3 106 4.05E-24 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23710 9a2f3e8745222c3eb6ee0c69c841e814 178 Gene3D G3DSA:1.10.520.20 5 97 2.4E-12 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23710 9a2f3e8745222c3eb6ee0c69c841e814 178 PRINTS PR00125 ATP synthase delta subunit signature 74 85 3.4E-25 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23710 9a2f3e8745222c3eb6ee0c69c841e814 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 3.4E-25 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23710 9a2f3e8745222c3eb6ee0c69c841e814 178 PRINTS PR00125 ATP synthase delta subunit signature 85 99 3.4E-25 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23710 9a2f3e8745222c3eb6ee0c69c841e814 178 PRINTS PR00125 ATP synthase delta subunit signature 6 25 3.4E-25 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23710 9a2f3e8745222c3eb6ee0c69c841e814 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 3.4E-25 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23710 9a2f3e8745222c3eb6ee0c69c841e814 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 2 178 20.758 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_07935 a173c810da23f3f0a46ab2d7914ffcb7 339 Gene3D G3DSA:3.20.20.30 7 339 6.9E-103 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 N288_07935 a173c810da23f3f0a46ab2d7914ffcb7 339 Pfam PF00296 Luciferase-like monooxygenase 24 304 4.5E-41 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 N288_07935 a173c810da23f3f0a46ab2d7914ffcb7 339 SUPERFAMILY SSF51679 10 334 5.06E-91 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 N288_07935 a173c810da23f3f0a46ab2d7914ffcb7 339 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 13 334 4.1E-140 T 12-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 N288_09295 15e934dc991a27253f18c8428a158c82 923 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 13 831 0.0 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 N288_09295 15e934dc991a27253f18c8428a158c82 923 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 228 251 1.4E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 N288_09295 15e934dc991a27253f18c8428a158c82 923 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 1.4E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 N288_09295 15e934dc991a27253f18c8428a158c82 923 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 518 531 1.4E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 N288_09295 15e934dc991a27253f18c8428a158c82 923 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 390 405 1.4E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 N288_09295 15e934dc991a27253f18c8428a158c82 923 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 552 561 1.4E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 N288_09295 15e934dc991a27253f18c8428a158c82 923 Gene3D G3DSA:1.10.730.20 631 918 1.0E-101 T 12-10-2018 N288_09295 15e934dc991a27253f18c8428a158c82 923 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 916 21.309 T 12-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 N288_09295 15e934dc991a27253f18c8428a158c82 923 Pfam PF08264 Anticodon-binding domain of tRNA 676 829 4.3E-29 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 N288_09295 15e934dc991a27253f18c8428a158c82 923 Pfam PF06827 Zinc finger found in FPG and IleRS 885 914 7.1E-9 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 N288_09295 15e934dc991a27253f18c8428a158c82 923 SUPERFAMILY SSF50677 202 392 1.26E-63 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 N288_09295 15e934dc991a27253f18c8428a158c82 923 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 632 2.8E-223 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_09295 15e934dc991a27253f18c8428a158c82 923 SUPERFAMILY SSF52374 1 639 3.05E-155 T 12-10-2018 N288_09295 15e934dc991a27253f18c8428a158c82 923 SUPERFAMILY SSF47323 643 917 2.43E-79 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_09295 15e934dc991a27253f18c8428a158c82 923 Gene3D G3DSA:3.90.740.10 193 397 2.0E-264 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 N288_09295 15e934dc991a27253f18c8428a158c82 923 Gene3D G3DSA:3.40.50.620 24 620 2.0E-264 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_09295 15e934dc991a27253f18c8428a158c82 923 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_15220 310fe8d84c7e0cbc9ef0a97b25d23cf9 119 Gene3D G3DSA:3.10.180.10 2 118 3.1E-18 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_15220 310fe8d84c7e0cbc9ef0a97b25d23cf9 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 115 1.8E-9 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_15220 310fe8d84c7e0cbc9ef0a97b25d23cf9 119 SUPERFAMILY SSF54593 3 116 6.04E-21 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_18190 eb7af7e73829706c2518512a54d01e43 219 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 6 214 2.1E-58 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 N288_18190 eb7af7e73829706c2518512a54d01e43 219 PIRSF PIRSF003107 1 219 4.6E-63 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 N288_18190 eb7af7e73829706c2518512a54d01e43 219 SUPERFAMILY SSF109755 4 218 4.71E-64 T 12-10-2018 N288_18190 eb7af7e73829706c2518512a54d01e43 219 Gene3D G3DSA:1.20.58.220 3 219 1.2E-70 T 12-10-2018 IPR038078 PhoU-like domain superfamily N288_18190 eb7af7e73829706c2518512a54d01e43 219 Pfam PF01895 PhoU domain 121 206 5.7E-20 T 12-10-2018 IPR026022 PhoU domain N288_18190 eb7af7e73829706c2518512a54d01e43 219 Pfam PF01895 PhoU domain 18 106 1.3E-18 T 12-10-2018 IPR026022 PhoU domain N288_15880 d62f1109b6b6cb670f8252d73170cc1a 66 PRINTS PR00050 Cold shock protein signature 39 57 5.6E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_15880 d62f1109b6b6cb670f8252d73170cc1a 66 PRINTS PR00050 Cold shock protein signature 24 33 5.6E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_15880 d62f1109b6b6cb670f8252d73170cc1a 66 PRINTS PR00050 Cold shock protein signature 4 19 5.6E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_15880 d62f1109b6b6cb670f8252d73170cc1a 66 Gene3D G3DSA:2.40.50.140 1 65 6.0E-30 T 12-10-2018 N288_15880 d62f1109b6b6cb670f8252d73170cc1a 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.9E-30 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_15880 d62f1109b6b6cb670f8252d73170cc1a 66 SMART SM00357 3 66 3.6E-29 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 N288_15880 d62f1109b6b6cb670f8252d73170cc1a 66 SUPERFAMILY SSF50249 1 64 1.2E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_15880 d62f1109b6b6cb670f8252d73170cc1a 66 PIRSF PIRSF002599 1 66 2.9E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 N288_15880 d62f1109b6b6cb670f8252d73170cc1a 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 12-10-2018 IPR019844 Cold-shock conserved site N288_10800 ea7e2a8ae1c1a335ee72e8b093054b84 337 SUPERFAMILY SSF53613 1 327 1.71E-75 T 12-10-2018 IPR029056 Ribokinase-like N288_10800 ea7e2a8ae1c1a335ee72e8b093054b84 337 Pfam PF00294 pfkB family carbohydrate kinase 2 206 3.3E-25 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB N288_10800 ea7e2a8ae1c1a335ee72e8b093054b84 337 Pfam PF00294 pfkB family carbohydrate kinase 265 319 4.5E-8 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB N288_10800 ea7e2a8ae1c1a335ee72e8b093054b84 337 Gene3D G3DSA:3.40.1190.20 1 337 3.5E-115 T 12-10-2018 IPR029056 Ribokinase-like N288_14170 266e07e03292a75acd85c02da0c150ae 280 SUPERFAMILY SSF161098 12 280 7.66E-67 T 12-10-2018 IPR035906 MetI-like superfamily N288_14170 266e07e03292a75acd85c02da0c150ae 280 Gene3D G3DSA:1.10.3720.10 4 272 1.2E-59 T 12-10-2018 IPR035906 MetI-like superfamily N288_14170 266e07e03292a75acd85c02da0c150ae 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 264 1.5E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_08430 3b3fb8e552a25313492f96d6759dc67e 412 Gene3D G3DSA:1.20.1250.20 12 204 8.9E-22 T 12-10-2018 N288_08430 3b3fb8e552a25313492f96d6759dc67e 412 Gene3D G3DSA:1.20.1250.20 216 404 7.3E-23 T 12-10-2018 N288_08430 3b3fb8e552a25313492f96d6759dc67e 412 Pfam PF07690 Major Facilitator Superfamily 25 353 2.5E-29 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_08430 3b3fb8e552a25313492f96d6759dc67e 412 SUPERFAMILY SSF103473 15 399 3.27E-57 T 12-10-2018 IPR036259 MFS transporter superfamily N288_02130 93a4f965db2d3ace005122ba603a33bd 396 Pfam PF00288 GHMP kinases N terminal domain 117 184 5.1E-13 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 N288_02130 93a4f965db2d3ace005122ba603a33bd 396 PRINTS PR00473 Galactokinase signature 29 47 3.7E-28 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 N288_02130 93a4f965db2d3ace005122ba603a33bd 396 PRINTS PR00473 Galactokinase signature 94 105 3.7E-28 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 N288_02130 93a4f965db2d3ace005122ba603a33bd 396 PRINTS PR00473 Galactokinase signature 115 133 3.7E-28 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 N288_02130 93a4f965db2d3ace005122ba603a33bd 396 PRINTS PR00473 Galactokinase signature 272 286 3.7E-28 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 N288_02130 93a4f965db2d3ace005122ba603a33bd 396 Gene3D G3DSA:3.30.230.10 24 204 1.7E-141 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup N288_02130 93a4f965db2d3ace005122ba603a33bd 396 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 124 135 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 N288_02130 93a4f965db2d3ace005122ba603a33bd 396 ProSitePatterns PS00106 Galactokinase signature. 29 40 - T 12-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 N288_02130 93a4f965db2d3ace005122ba603a33bd 396 TIGRFAM TIGR00131 gal_kin: galactokinase 23 389 3.2E-120 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 N288_02130 93a4f965db2d3ace005122ba603a33bd 396 PRINTS PR00959 Mevalonate kinase family signature 27 51 1.3E-43 T 12-10-2018 N288_02130 93a4f965db2d3ace005122ba603a33bd 396 PRINTS PR00959 Mevalonate kinase family signature 165 184 1.3E-43 T 12-10-2018 N288_02130 93a4f965db2d3ace005122ba603a33bd 396 PRINTS PR00959 Mevalonate kinase family signature 336 353 1.3E-43 T 12-10-2018 N288_02130 93a4f965db2d3ace005122ba603a33bd 396 PRINTS PR00959 Mevalonate kinase family signature 122 144 1.3E-43 T 12-10-2018 N288_02130 93a4f965db2d3ace005122ba603a33bd 396 SUPERFAMILY SSF55060 208 388 7.36E-58 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily N288_02130 93a4f965db2d3ace005122ba603a33bd 396 PIRSF PIRSF000530 1 392 4.9E-126 T 12-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 N288_02130 93a4f965db2d3ace005122ba603a33bd 396 SUPERFAMILY SSF54211 4 206 2.5E-61 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_02130 93a4f965db2d3ace005122ba603a33bd 396 Hamap MF_00246 Galactokinase [galK]. 27 389 48.714 T 12-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 N288_02130 93a4f965db2d3ace005122ba603a33bd 396 Pfam PF08544 GHMP kinases C terminal 287 366 5.3E-17 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain N288_02130 93a4f965db2d3ace005122ba603a33bd 396 Pfam PF10509 Galactokinase galactose-binding signature 9 59 2.7E-20 T 12-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 N288_02130 93a4f965db2d3ace005122ba603a33bd 396 Gene3D G3DSA:3.30.70.890 205 365 1.7E-141 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily N288_03410 9424f9a8fc01f78148beab96dca7a9dc 290 SUPERFAMILY SSF161111 10 211 6.41E-51 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily N288_03410 9424f9a8fc01f78148beab96dca7a9dc 290 Pfam PF16916 Dimerisation domain of Zinc Transporter 222 289 2.7E-15 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain N288_03410 9424f9a8fc01f78148beab96dca7a9dc 290 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 289 8.8E-63 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 N288_03410 9424f9a8fc01f78148beab96dca7a9dc 290 Pfam PF01545 Cation efflux family 17 209 1.9E-46 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 N288_03410 9424f9a8fc01f78148beab96dca7a9dc 290 SUPERFAMILY SSF160240 213 289 9.42E-18 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 N288_03410 9424f9a8fc01f78148beab96dca7a9dc 290 Gene3D G3DSA:1.20.1510.10 12 206 6.9E-54 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily N288_03410 9424f9a8fc01f78148beab96dca7a9dc 290 Gene3D G3DSA:3.30.70.1350 207 290 1.0E-14 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 N288_20300 1839596b75fd3754e4a8d2a200afdfe1 331 SUPERFAMILY SSF53850 31 256 8.23E-36 T 12-10-2018 N288_20300 1839596b75fd3754e4a8d2a200afdfe1 331 Pfam PF13379 NMT1-like family 28 262 5.7E-24 T 12-10-2018 N288_20300 1839596b75fd3754e4a8d2a200afdfe1 331 Gene3D G3DSA:3.40.190.10 142 331 2.5E-33 T 12-10-2018 N288_20300 1839596b75fd3754e4a8d2a200afdfe1 331 Gene3D G3DSA:3.40.190.10 32 126 6.6E-17 T 12-10-2018 N288_13105 f6bdd39585b840b2334c34ecc1dc839a 248 Pfam PF13529 Peptidase_C39 like family 61 221 1.5E-40 T 12-10-2018 IPR039564 Peptidase C39-like N288_13105 f6bdd39585b840b2334c34ecc1dc839a 248 PIRSF PIRSF032442 2 248 1.8E-72 T 12-10-2018 IPR016997 Uncharacterised conserved protein UCP032442 N288_13105 f6bdd39585b840b2334c34ecc1dc839a 248 Gene3D G3DSA:3.90.70.10 56 248 4.6E-67 T 12-10-2018 N288_12460 ef07a9ae4b641add7d814242de05dfef 110 TIGRFAM TIGR02861 SASP_H: small acid-soluble spore protein, H-type 52 108 7.8E-20 T 12-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 N288_12460 ef07a9ae4b641add7d814242de05dfef 110 Pfam PF08141 Small acid-soluble spore protein H family 52 109 1.3E-20 T 12-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 N288_12460 ef07a9ae4b641add7d814242de05dfef 110 Hamap MF_00667 Small, acid-soluble spore protein H [sspH]. 52 110 16.147 T 12-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 N288_12460 ef07a9ae4b641add7d814242de05dfef 110 ProDom PD052450 H SPORE ACID-SOLUBLE SMALL SASP SPORULATION SMALL PROTEIN-RELATED SOLUBLE RBL04815 52 109 6.0E-10 T 12-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 N288_11900 512753813378a6dc2eed4709d15d9cbc 474 Pfam PF03441 FAD binding domain of DNA photolyase 265 443 5.1E-43 T 12-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 N288_11900 512753813378a6dc2eed4709d15d9cbc 474 PRINTS PR00147 DNA photolyase signature 324 342 9.6E-5 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 N288_11900 512753813378a6dc2eed4709d15d9cbc 474 PRINTS PR00147 DNA photolyase signature 304 320 9.6E-5 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 N288_11900 512753813378a6dc2eed4709d15d9cbc 474 SUPERFAMILY SSF48173 186 444 2.35E-60 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 N288_11900 512753813378a6dc2eed4709d15d9cbc 474 Gene3D G3DSA:3.40.50.620 1 118 3.7E-25 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_11900 512753813378a6dc2eed4709d15d9cbc 474 Gene3D G3DSA:1.10.579.10 277 472 4.0E-44 T 12-10-2018 N288_11900 512753813378a6dc2eed4709d15d9cbc 474 SUPERFAMILY SSF52425 1 164 7.98E-33 T 12-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 N288_11900 512753813378a6dc2eed4709d15d9cbc 474 Gene3D G3DSA:1.25.40.80 119 276 2.0E-16 T 12-10-2018 N288_11900 512753813378a6dc2eed4709d15d9cbc 474 Pfam PF00875 DNA photolyase 3 106 2.0E-23 T 12-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 N288_02740 88f8caa9167ae5196018cd2a7a257eaf 497 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 158 170 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 N288_02740 88f8caa9167ae5196018cd2a7a257eaf 497 SUPERFAMILY SSF103473 17 490 1.92E-35 T 12-10-2018 IPR036259 MFS transporter superfamily N288_02740 88f8caa9167ae5196018cd2a7a257eaf 497 Pfam PF00854 POT family 96 461 4.3E-80 T 12-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 N288_02740 88f8caa9167ae5196018cd2a7a257eaf 497 Gene3D G3DSA:1.20.1250.20 1 497 5.3E-155 T 12-10-2018 N288_02740 88f8caa9167ae5196018cd2a7a257eaf 497 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 16 493 1.2E-135 T 12-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 N288_02740 88f8caa9167ae5196018cd2a7a257eaf 497 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 84 108 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 N288_11935 78e7d92a7665222562a569dd264cc7fb 154 Gene3D G3DSA:3.30.530.20 3 143 1.7E-16 T 12-10-2018 IPR023393 START-like domain superfamily N288_11935 78e7d92a7665222562a569dd264cc7fb 154 SUPERFAMILY SSF55961 5 143 1.33E-18 T 12-10-2018 N288_11935 78e7d92a7665222562a569dd264cc7fb 154 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 8 141 1.2E-8 T 12-10-2018 IPR010419 Carbon monoxide dehydrogenase subunit G N288_17970 5d433ce03e64a3243f6635ea51334ce6 127 SMART SM00450 30 125 2.3E-28 T 12-10-2018 IPR001763 Rhodanese-like domain N288_17970 5d433ce03e64a3243f6635ea51334ce6 127 Gene3D G3DSA:3.40.250.10 31 127 6.9E-30 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_17970 5d433ce03e64a3243f6635ea51334ce6 127 Pfam PF00581 Rhodanese-like domain 42 121 2.2E-18 T 12-10-2018 IPR001763 Rhodanese-like domain N288_17970 5d433ce03e64a3243f6635ea51334ce6 127 SUPERFAMILY SSF52821 13 121 2.36E-34 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_18230 c5a9d109c9e65e79d366e77244f4ba8f 202 Gene3D G3DSA:1.10.287.990 20 90 8.0E-32 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_18230 c5a9d109c9e65e79d366e77244f4ba8f 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 90 8.3E-34 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_18230 c5a9d109c9e65e79d366e77244f4ba8f 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_18230 c5a9d109c9e65e79d366e77244f4ba8f 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 197 2.5E-42 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_18230 c5a9d109c9e65e79d366e77244f4ba8f 202 SUPERFAMILY SSF54719 92 201 4.71E-48 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_18230 c5a9d109c9e65e79d366e77244f4ba8f 202 Gene3D G3DSA:2.40.500.20 91 202 1.7E-51 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_18230 c5a9d109c9e65e79d366e77244f4ba8f 202 PIRSF PIRSF000349 1 202 1.9E-86 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_18230 c5a9d109c9e65e79d366e77244f4ba8f 202 PRINTS PR01703 Manganese superoxide dismutase signature 126 134 5.2E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_18230 c5a9d109c9e65e79d366e77244f4ba8f 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 5.2E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_18230 c5a9d109c9e65e79d366e77244f4ba8f 202 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 5.2E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_18230 c5a9d109c9e65e79d366e77244f4ba8f 202 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 5.2E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_18230 c5a9d109c9e65e79d366e77244f4ba8f 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 5.2E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_18230 c5a9d109c9e65e79d366e77244f4ba8f 202 SUPERFAMILY SSF46609 1 91 7.46E-38 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_10785 a171650c2f23d97c58e24f420693e6a8 487 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 204 449 1.8E-51 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 N288_10785 a171650c2f23d97c58e24f420693e6a8 487 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 171 1.3E-19 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 N288_10785 a171650c2f23d97c58e24f420693e6a8 487 Gene3D G3DSA:3.40.50.720 2 268 3.2E-48 T 12-10-2018 N288_10785 a171650c2f23d97c58e24f420693e6a8 487 SUPERFAMILY SSF48179 272 477 5.78E-37 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_10785 a171650c2f23d97c58e24f420693e6a8 487 SUPERFAMILY SSF51735 11 268 1.93E-66 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_10785 a171650c2f23d97c58e24f420693e6a8 487 Gene3D G3DSA:1.10.1040.10 271 477 4.3E-51 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 Gene3D G3DSA:1.20.1640.10 10 499 1.3E-240 T 12-10-2018 N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 Gene3D G3DSA:3.30.70.1440 639 830 1.3E-240 T 12-10-2018 N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 Gene3D G3DSA:3.30.70.1430 40 781 1.3E-240 T 12-10-2018 N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 SUPERFAMILY SSF82693 55 100 8.63E-8 T 12-10-2018 N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 SUPERFAMILY SSF82714 179 258 3.53E-8 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 SUPERFAMILY SSF82866 772 993 2.22E-51 T 12-10-2018 N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 Gene3D G3DSA:3.30.70.1430 549 638 1.3E-240 T 12-10-2018 N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 Gene3D G3DSA:1.20.1640.10 500 987 1.3E-240 T 12-10-2018 N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 SUPERFAMILY SSF82866 290 485 4.97E-42 T 12-10-2018 N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 Gene3D G3DSA:3.30.2090.10 174 263 1.3E-240 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 SUPERFAMILY SSF82693 144 304 1.1E-5 T 12-10-2018 N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 PRINTS PR00702 Acriflavin resistance protein family signature 326 349 1.2E-33 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 PRINTS PR00702 Acriflavin resistance protein family signature 434 457 1.2E-33 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 PRINTS PR00702 Acriflavin resistance protein family signature 459 482 1.2E-33 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 PRINTS PR00702 Acriflavin resistance protein family signature 381 405 1.2E-33 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-33 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 PRINTS PR00702 Acriflavin resistance protein family signature 353 374 1.2E-33 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 Pfam PF00873 AcrB/AcrD/AcrF family 4 990 1.9E-190 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 Gene3D G3DSA:3.30.70.1320 132 322 1.3E-240 T 12-10-2018 N288_05500 58e36e6ea3e5d7be25438d2280901ac1 1009 Gene3D G3DSA:3.30.2090.10 687 773 1.3E-240 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains N288_12755 f62006d9a01e442bd73f3b5d09b8a8dd 357 PIRSF PIRSF019574 1 356 7.1E-132 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 N288_12755 f62006d9a01e442bd73f3b5d09b8a8dd 357 Gene3D G3DSA:3.40.190.10 139 331 3.4E-123 T 12-10-2018 N288_12755 f62006d9a01e442bd73f3b5d09b8a8dd 357 Pfam PF13416 Bacterial extracellular solute-binding protein 49 320 7.6E-43 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein N288_12755 f62006d9a01e442bd73f3b5d09b8a8dd 357 Gene3D G3DSA:3.40.190.10 39 322 3.4E-123 T 12-10-2018 N288_12755 f62006d9a01e442bd73f3b5d09b8a8dd 357 SUPERFAMILY SSF53850 35 353 1.61E-99 T 12-10-2018 N288_12755 f62006d9a01e442bd73f3b5d09b8a8dd 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 255 274 4.1E-57 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 N288_12755 f62006d9a01e442bd73f3b5d09b8a8dd 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 174 193 4.1E-57 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 N288_12755 f62006d9a01e442bd73f3b5d09b8a8dd 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 83 97 4.1E-57 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 N288_12755 f62006d9a01e442bd73f3b5d09b8a8dd 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 40 56 4.1E-57 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 N288_12755 f62006d9a01e442bd73f3b5d09b8a8dd 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 56 77 4.1E-57 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 N288_12755 f62006d9a01e442bd73f3b5d09b8a8dd 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 130 146 4.1E-57 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 N288_12755 f62006d9a01e442bd73f3b5d09b8a8dd 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 170 4.1E-57 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 N288_12755 f62006d9a01e442bd73f3b5d09b8a8dd 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 99 112 4.1E-57 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 N288_12755 f62006d9a01e442bd73f3b5d09b8a8dd 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 300 326 4.1E-57 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 SUPERFAMILY SSF55785 48 154 6.28E-11 T 12-10-2018 IPR035965 PAS domain superfamily N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 Gene3D G3DSA:3.30.450.20 262 386 1.9E-19 T 12-10-2018 N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 Gene3D G3DSA:3.30.450.20 147 261 3.6E-14 T 12-10-2018 N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 Pfam PF13426 PAS domain 168 263 3.3E-7 T 12-10-2018 IPR000014 PAS domain N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 Pfam PF13426 PAS domain 48 144 2.1E-8 T 12-10-2018 IPR000014 PAS domain N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 SMART SM00387 509 616 3.5E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 154 272 2.3E-9 T 12-10-2018 IPR000014 PAS domain N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 42 151 7.8E-12 T 12-10-2018 IPR000014 PAS domain N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 273 395 7.1E-11 T 12-10-2018 IPR000014 PAS domain N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 Pfam PF00512 His Kinase A (phospho-acceptor) domain 405 465 1.1E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 Gene3D G3DSA:3.30.450.20 17 146 3.2E-13 T 12-10-2018 N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 SUPERFAMILY SSF55785 168 274 1.01E-13 T 12-10-2018 IPR035965 PAS domain superfamily N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 SMART SM00091 157 225 9.9E-4 T 12-10-2018 IPR000014 PAS domain N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 SMART SM00091 37 103 2.7E-4 T 12-10-2018 IPR000014 PAS domain N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 SMART SM00091 277 345 1.8E-9 T 12-10-2018 IPR000014 PAS domain N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 Pfam PF00989 PAS fold 278 366 2.1E-8 T 12-10-2018 IPR013767 PAS fold GO:0006355 N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 Gene3D G3DSA:1.10.287.130 389 466 6.9E-18 T 12-10-2018 N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 SUPERFAMILY SSF47384 399 465 7.06E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 613 5.6E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 575 5.6E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 561 5.6E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 594 5.6E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 SUPERFAMILY SSF55874 457 615 1.83E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 SUPERFAMILY SSF55785 262 386 5.15E-18 T 12-10-2018 IPR035965 PAS domain superfamily N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 511 614 1.5E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 SMART SM00388 403 467 2.8E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_08365 1e4babba25168f83c2fbd09ec736a6d4 628 Gene3D G3DSA:3.30.565.10 469 619 1.2E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_10550 7747fdb4c6c91ba81950d28f716564d4 449 PIRSF PIRSF006351 1 443 1.6E-158 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 N288_10550 7747fdb4c6c91ba81950d28f716564d4 449 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 433 2.0E-194 T 12-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 N288_10550 7747fdb4c6c91ba81950d28f716564d4 449 Pfam PF02378 Phosphotransferase system, EIIC 29 359 7.2E-80 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 N288_10550 7747fdb4c6c91ba81950d28f716564d4 449 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 433 2.0E-194 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 N288_25765 a6b73857ace8619d1867c9e4bd9ffc8a 286 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 36 269 2.2E-72 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 N288_25765 a6b73857ace8619d1867c9e4bd9ffc8a 286 Gene3D G3DSA:1.20.1080.10 18 279 6.8E-83 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 N288_25765 a6b73857ace8619d1867c9e4bd9ffc8a 286 Pfam PF01226 Formate/nitrite transporter 24 266 1.0E-77 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 N288_13870 ba47a9c063dec8d8553f4106a04487df 281 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 127 144 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 N288_13870 ba47a9c063dec8d8553f4106a04487df 281 Gene3D G3DSA:3.20.20.100 4 276 6.9E-96 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily N288_13870 ba47a9c063dec8d8553f4106a04487df 281 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 43 60 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 N288_13870 ba47a9c063dec8d8553f4106a04487df 281 PIRSF PIRSF000097 3 280 2.1E-75 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_13870 ba47a9c063dec8d8553f4106a04487df 281 SUPERFAMILY SSF51430 8 267 1.07E-80 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily N288_13870 ba47a9c063dec8d8553f4106a04487df 281 Pfam PF00248 Aldo/keto reductase family 19 263 2.5E-45 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain N288_13870 ba47a9c063dec8d8553f4106a04487df 281 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 232 247 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 N288_13870 ba47a9c063dec8d8553f4106a04487df 281 PRINTS PR00069 Aldo-keto reductase signature 95 113 4.3E-40 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_13870 ba47a9c063dec8d8553f4106a04487df 281 PRINTS PR00069 Aldo-keto reductase signature 199 223 4.3E-40 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_13870 ba47a9c063dec8d8553f4106a04487df 281 PRINTS PR00069 Aldo-keto reductase signature 39 63 4.3E-40 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_13870 ba47a9c063dec8d8553f4106a04487df 281 PRINTS PR00069 Aldo-keto reductase signature 127 144 4.3E-40 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_13870 ba47a9c063dec8d8553f4106a04487df 281 PRINTS PR00069 Aldo-keto reductase signature 161 190 4.3E-40 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_19095 f03cf77642cdb90712da489fb614383e 137 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 35 2.9E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site N288_19095 f03cf77642cdb90712da489fb614383e 137 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 34 1.1E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site N288_19095 f03cf77642cdb90712da489fb614383e 137 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site N288_19095 f03cf77642cdb90712da489fb614383e 137 SUPERFAMILY SSF54523 16 77 5.18E-13 T 12-10-2018 N288_19095 f03cf77642cdb90712da489fb614383e 137 Gene3D G3DSA:3.30.700.10 16 134 1.8E-16 T 12-10-2018 N288_11065 51fdc7c1d1e4a089f1eb3375133f315e 208 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 205 28.6 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 N288_11065 51fdc7c1d1e4a089f1eb3375133f315e 208 SUPERFAMILY SSF52218 1 206 6.86E-47 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_11065 51fdc7c1d1e4a089f1eb3375133f315e 208 Gene3D G3DSA:3.40.50.360 1 208 2.0E-58 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_11065 51fdc7c1d1e4a089f1eb3375133f315e 208 Pfam PF02525 Flavodoxin-like fold 3 202 1.1E-39 T 12-10-2018 IPR003680 Flavodoxin-like fold N288_09415 c237a2322e09a7c86a1fc1ffd98c4c38 318 Gene3D G3DSA:3.40.50.170 1 206 7.4E-86 T 12-10-2018 N288_09415 c237a2322e09a7c86a1fc1ffd98c4c38 318 Pfam PF02911 Formyl transferase, C-terminal domain 204 302 1.2E-27 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 N288_09415 c237a2322e09a7c86a1fc1ffd98c4c38 318 Pfam PF00551 Formyl transferase 3 180 7.6E-40 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 N288_09415 c237a2322e09a7c86a1fc1ffd98c4c38 318 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 305 36.012 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 N288_09415 c237a2322e09a7c86a1fc1ffd98c4c38 318 SUPERFAMILY SSF50486 205 304 1.04E-28 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 N288_09415 c237a2322e09a7c86a1fc1ffd98c4c38 318 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 N288_09415 c237a2322e09a7c86a1fc1ffd98c4c38 318 Gene3D G3DSA:3.10.25.10 207 316 1.1E-35 T 12-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 N288_09415 c237a2322e09a7c86a1fc1ffd98c4c38 318 SUPERFAMILY SSF53328 3 206 9.94E-66 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 N288_09415 c237a2322e09a7c86a1fc1ffd98c4c38 318 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 302 7.4E-109 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 N288_22855 0848054c88f7aad36cd6e2c93822a70a 291 Gene3D G3DSA:1.10.3720.10 48 290 2.3E-76 T 12-10-2018 IPR035906 MetI-like superfamily N288_22855 0848054c88f7aad36cd6e2c93822a70a 291 SUPERFAMILY SSF161098 52 279 6.93E-65 T 12-10-2018 IPR035906 MetI-like superfamily N288_22855 0848054c88f7aad36cd6e2c93822a70a 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 289 2.5E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_04295 ccd9ce343ac5fb6b1a1b1069be496ab7 320 Pfam PF13280 WYL domain 139 312 4.9E-30 T 12-10-2018 IPR026881 WYL domain N288_04295 ccd9ce343ac5fb6b1a1b1069be496ab7 320 Pfam PF08279 HTH domain 9 60 5.0E-13 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 N288_04295 ccd9ce343ac5fb6b1a1b1069be496ab7 320 Gene3D G3DSA:1.10.10.10 1 63 6.7E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_04295 ccd9ce343ac5fb6b1a1b1069be496ab7 320 SUPERFAMILY SSF46785 4 60 8.35E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_05365 09237bbbc9382a7fc73979d159263825 542 Pfam PF07690 Major Facilitator Superfamily 39 422 1.9E-19 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_05365 09237bbbc9382a7fc73979d159263825 542 SUPERFAMILY SSF103473 25 527 1.14E-25 T 12-10-2018 IPR036259 MFS transporter superfamily N288_00725 2a46f5d0247d06da476efc700238eef8 156 Gene3D G3DSA:1.10.455.10 2 156 2.1E-63 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily N288_00725 2a46f5d0247d06da476efc700238eef8 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.479 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 N288_00725 2a46f5d0247d06da476efc700238eef8 156 SUPERFAMILY SSF47973 1 149 2.75E-61 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily N288_00725 2a46f5d0247d06da476efc700238eef8 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 12-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00725 2a46f5d0247d06da476efc700238eef8 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 7.9E-66 T 12-10-2018 IPR023798 Ribosomal protein S7 domain N288_00725 2a46f5d0247d06da476efc700238eef8 156 PIRSF PIRSF002122 5 156 3.2E-59 T 12-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 N288_00725 2a46f5d0247d06da476efc700238eef8 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.2E-69 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 N288_01845 8b431f6dc68be6a7f3db2f4f87c0d20c 146 PRINTS PR00502 NUDIX hydrolase family signature 31 45 2.6E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_01845 8b431f6dc68be6a7f3db2f4f87c0d20c 146 PRINTS PR00502 NUDIX hydrolase family signature 45 60 2.6E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_01845 8b431f6dc68be6a7f3db2f4f87c0d20c 146 Gene3D G3DSA:3.90.79.10 3 146 1.2E-30 T 12-10-2018 N288_01845 8b431f6dc68be6a7f3db2f4f87c0d20c 146 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_01845 8b431f6dc68be6a7f3db2f4f87c0d20c 146 Pfam PF00293 NUDIX domain 10 114 1.5E-17 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_01845 8b431f6dc68be6a7f3db2f4f87c0d20c 146 SUPERFAMILY SSF55811 7 126 2.3E-27 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_16575 c276bd6610ae41dcefc7a342358a6784 218 Pfam PF13456 Reverse transcriptase-like 78 205 6.8E-15 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 N288_16575 c276bd6610ae41dcefc7a342358a6784 218 SUPERFAMILY SSF53098 73 208 1.21E-19 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily N288_16575 c276bd6610ae41dcefc7a342358a6784 218 Gene3D G3DSA:3.30.420.10 73 216 1.4E-29 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 N288_06050 635d14d5f0a2ae81f150d9b1a8147e1a 557 SUPERFAMILY SSF55073 261 415 8.63E-46 T 12-10-2018 IPR029787 Nucleotide cyclase N288_06050 635d14d5f0a2ae81f150d9b1a8147e1a 557 Gene3D G3DSA:3.40.50.2300 114 254 3.8E-25 T 12-10-2018 N288_06050 635d14d5f0a2ae81f150d9b1a8147e1a 557 SUPERFAMILY SSF52172 430 555 2.85E-28 T 12-10-2018 IPR011006 CheY-like superfamily N288_06050 635d14d5f0a2ae81f150d9b1a8147e1a 557 Gene3D G3DSA:3.30.70.270 255 420 9.2E-52 T 12-10-2018 N288_06050 635d14d5f0a2ae81f150d9b1a8147e1a 557 SMART SM00267 244 417 1.4E-54 T 12-10-2018 IPR000160 GGDEF domain N288_06050 635d14d5f0a2ae81f150d9b1a8147e1a 557 Gene3D G3DSA:3.40.50.2300 424 557 1.0E-28 T 12-10-2018 N288_06050 635d14d5f0a2ae81f150d9b1a8147e1a 557 SMART SM00448 429 549 1.7E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_06050 635d14d5f0a2ae81f150d9b1a8147e1a 557 SMART SM00448 129 242 1.8E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_06050 635d14d5f0a2ae81f150d9b1a8147e1a 557 Pfam PF00990 Diguanylate cyclase, GGDEF domain 257 412 1.1E-45 T 12-10-2018 IPR000160 GGDEF domain N288_06050 635d14d5f0a2ae81f150d9b1a8147e1a 557 SUPERFAMILY SSF52172 125 260 5.69E-30 T 12-10-2018 IPR011006 CheY-like superfamily N288_06050 635d14d5f0a2ae81f150d9b1a8147e1a 557 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 256 416 4.7E-47 T 12-10-2018 IPR000160 GGDEF domain N288_06050 635d14d5f0a2ae81f150d9b1a8147e1a 557 Pfam PF01627 Hpt domain 49 87 6.6E-5 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 N288_06050 635d14d5f0a2ae81f150d9b1a8147e1a 557 Pfam PF00072 Response regulator receiver domain 431 549 1.6E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_06050 635d14d5f0a2ae81f150d9b1a8147e1a 557 Pfam PF00072 Response regulator receiver domain 131 242 3.3E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_06050 635d14d5f0a2ae81f150d9b1a8147e1a 557 SUPERFAMILY SSF47226 41 114 9.16E-6 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 N288_21585 11978e896e37040f89dd59dfe976305c 431 Hamap MF_00318 Enolase [eno]. 2 414 46.244 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21585 11978e896e37040f89dd59dfe976305c 431 PIRSF PIRSF001400 1 428 4.1E-197 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21585 11978e896e37040f89dd59dfe976305c 431 SUPERFAMILY SSF54826 3 138 3.09E-61 T 12-10-2018 N288_21585 11978e896e37040f89dd59dfe976305c 431 Gene3D G3DSA:3.30.390.10 1 127 1.8E-59 T 12-10-2018 IPR029017 Enolase-like, N-terminal N288_21585 11978e896e37040f89dd59dfe976305c 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 2.8E-218 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21585 11978e896e37040f89dd59dfe976305c 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 426 1.3E-140 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21585 11978e896e37040f89dd59dfe976305c 431 Pfam PF03952 Enolase, N-terminal domain 4 134 1.5E-63 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21585 11978e896e37040f89dd59dfe976305c 431 SMART SM01193 4 134 2.0E-102 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21585 11978e896e37040f89dd59dfe976305c 431 SMART SM01192 139 428 1.4E-225 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21585 11978e896e37040f89dd59dfe976305c 431 Gene3D G3DSA:3.20.20.120 128 431 3.3E-138 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily N288_21585 11978e896e37040f89dd59dfe976305c 431 ProSitePatterns PS00164 Enolase signature. 337 350 - T 12-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21585 11978e896e37040f89dd59dfe976305c 431 SUPERFAMILY SSF51604 138 428 1.41E-133 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily N288_21585 11978e896e37040f89dd59dfe976305c 431 PRINTS PR00148 Enolase signature 314 325 3.1E-46 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21585 11978e896e37040f89dd59dfe976305c 431 PRINTS PR00148 Enolase signature 366 383 3.1E-46 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21585 11978e896e37040f89dd59dfe976305c 431 PRINTS PR00148 Enolase signature 337 351 3.1E-46 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21585 11978e896e37040f89dd59dfe976305c 431 PRINTS PR00148 Enolase signature 107 123 3.1E-46 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21585 11978e896e37040f89dd59dfe976305c 431 PRINTS PR00148 Enolase signature 37 51 3.1E-46 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21585 11978e896e37040f89dd59dfe976305c 431 PRINTS PR00148 Enolase signature 161 174 3.1E-46 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21800 8a1f7b2ef0c7681c2a84c20f110a459d 659 Gene3D G3DSA:3.40.50.300 1 243 4.9E-83 T 12-10-2018 N288_21800 8a1f7b2ef0c7681c2a84c20f110a459d 659 Pfam PF02151 UvrB/uvrC motif 623 657 2.6E-9 T 12-10-2018 IPR001943 UVR domain GO:0005515 N288_21800 8a1f7b2ef0c7681c2a84c20f110a459d 659 Gene3D G3DSA:4.10.860.10 602 658 1.0E-5 T 12-10-2018 N288_21800 8a1f7b2ef0c7681c2a84c20f110a459d 659 SUPERFAMILY SSF52540 3 414 2.64E-144 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_21800 8a1f7b2ef0c7681c2a84c20f110a459d 659 Pfam PF00271 Helicase conserved C-terminal domain 436 544 2.6E-19 T 12-10-2018 IPR001650 Helicase, C-terminal N288_21800 8a1f7b2ef0c7681c2a84c20f110a459d 659 Pfam PF04851 Type III restriction enzyme, res subunit 13 138 8.9E-12 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 N288_21800 8a1f7b2ef0c7681c2a84c20f110a459d 659 Gene3D G3DSA:3.40.50.300 274 413 4.8E-53 T 12-10-2018 N288_21800 8a1f7b2ef0c7681c2a84c20f110a459d 659 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 656 0.0 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 N288_21800 8a1f7b2ef0c7681c2a84c20f110a459d 659 SUPERFAMILY SSF46600 615 657 1.44E-10 T 12-10-2018 IPR036876 UVR domain superfamily N288_21800 8a1f7b2ef0c7681c2a84c20f110a459d 659 Pfam PF12344 Ultra-violet resistance protein B 551 593 5.0E-24 T 12-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain N288_21800 8a1f7b2ef0c7681c2a84c20f110a459d 659 SMART SM00487 9 425 8.1E-28 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_21800 8a1f7b2ef0c7681c2a84c20f110a459d 659 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 658 45.05 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 N288_21800 8a1f7b2ef0c7681c2a84c20f110a459d 659 SUPERFAMILY SSF52540 34 571 1.06E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_21800 8a1f7b2ef0c7681c2a84c20f110a459d 659 SMART SM00490 459 545 8.9E-20 T 12-10-2018 IPR001650 Helicase, C-terminal N288_21800 8a1f7b2ef0c7681c2a84c20f110a459d 659 Gene3D G3DSA:3.40.50.300 414 595 5.7E-55 T 12-10-2018 N288_05280 4a7c31125adf4397efe7a2f8088a8260 100 Gene3D G3DSA:3.30.70.1480 1 100 2.0E-33 T 12-10-2018 IPR028990 GK1464-like N288_05280 4a7c31125adf4397efe7a2f8088a8260 100 SUPERFAMILY SSF143579 2 100 3.66E-43 T 12-10-2018 IPR028990 GK1464-like N288_01055 f99cda68ab4cf8be690dfe6bb14b087e 444 Gene3D G3DSA:2.170.120.40 232 318 2.4E-17 T 12-10-2018 N288_01055 f99cda68ab4cf8be690dfe6bb14b087e 444 Gene3D G3DSA:2.170.120.40 142 230 7.5E-8 T 12-10-2018 N288_01055 f99cda68ab4cf8be690dfe6bb14b087e 444 Gene3D G3DSA:2.170.120.30 43 141 7.4E-25 T 12-10-2018 N288_01055 f99cda68ab4cf8be690dfe6bb14b087e 444 Gene3D G3DSA:2.170.120.30 343 444 4.0E-19 T 12-10-2018 N288_01055 f99cda68ab4cf8be690dfe6bb14b087e 444 Pfam PF07949 YbbR-like protein 236 314 8.6E-12 T 12-10-2018 IPR012505 YbbR-like N288_01055 f99cda68ab4cf8be690dfe6bb14b087e 444 Pfam PF07949 YbbR-like protein 149 227 9.8E-10 T 12-10-2018 IPR012505 YbbR-like N288_01055 f99cda68ab4cf8be690dfe6bb14b087e 444 Pfam PF07949 YbbR-like protein 54 134 7.4E-7 T 12-10-2018 IPR012505 YbbR-like N288_07465 9be9f3143c3187a401e10e3e7916eeac 421 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 186 323 8.4E-30 T 12-10-2018 IPR001453 MoaB/Mog domain N288_07465 9be9f3143c3187a401e10e3e7916eeac 421 SUPERFAMILY SSF63867 337 413 3.01E-17 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 N288_07465 9be9f3143c3187a401e10e3e7916eeac 421 SUPERFAMILY SSF63882 7 185 6.8E-52 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 N288_07465 9be9f3143c3187a401e10e3e7916eeac 421 Gene3D G3DSA:2.40.340.10 338 406 1.4E-116 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 N288_07465 9be9f3143c3187a401e10e3e7916eeac 421 Pfam PF00994 Probable molybdopterin binding domain 191 326 5.1E-25 T 12-10-2018 IPR001453 MoaB/Mog domain N288_07465 9be9f3143c3187a401e10e3e7916eeac 421 Gene3D G3DSA:3.90.105.10 26 183 1.4E-116 T 12-10-2018 N288_07465 9be9f3143c3187a401e10e3e7916eeac 421 Gene3D G3DSA:2.170.190.11 50 150 1.4E-116 T 12-10-2018 N288_07465 9be9f3143c3187a401e10e3e7916eeac 421 SMART SM00852 189 327 1.9E-37 T 12-10-2018 IPR001453 MoaB/Mog domain N288_07465 9be9f3143c3187a401e10e3e7916eeac 421 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 176 2.1E-40 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 N288_07465 9be9f3143c3187a401e10e3e7916eeac 421 Gene3D G3DSA:3.40.980.10 25 337 1.4E-116 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily N288_07465 9be9f3143c3187a401e10e3e7916eeac 421 Pfam PF03454 MoeA C-terminal region (domain IV) 340 411 8.6E-17 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 N288_07465 9be9f3143c3187a401e10e3e7916eeac 421 SUPERFAMILY SSF53218 187 329 4.32E-38 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily N288_12530 b9046e09a4165c0bf6065b0acf93d746 282 SUPERFAMILY SSF56281 20 261 6.42E-46 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_12530 b9046e09a4165c0bf6065b0acf93d746 282 SMART SM00849 35 246 4.2E-30 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_12530 b9046e09a4165c0bf6065b0acf93d746 282 Pfam PF00753 Metallo-beta-lactamase superfamily 35 246 2.8E-33 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_12530 b9046e09a4165c0bf6065b0acf93d746 282 Gene3D G3DSA:3.60.15.10 13 261 3.9E-39 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_17255 64cb7b73a0294aacca5ec86a5370f372 169 Gene3D G3DSA:1.10.1660.10 1 66 6.6E-21 T 12-10-2018 N288_17255 64cb7b73a0294aacca5ec86a5370f372 169 SUPERFAMILY SSF46955 1 98 1.53E-8 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily N288_17255 64cb7b73a0294aacca5ec86a5370f372 169 Pfam PF13411 MerR HTH family regulatory protein 1 63 3.5E-10 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_17255 64cb7b73a0294aacca5ec86a5370f372 169 Hamap MF_01170 Chromosome-anchoring protein RacA [racA]. 1 169 19.345 T 12-10-2018 IPR023522 Chromosome-anchoring protein RacA N288_12920 7131266d4aded204d5e8c329644a0c0c 218 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 217 51.881 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 N288_12920 7131266d4aded204d5e8c329644a0c0c 218 Gene3D G3DSA:3.40.50.620 2 218 3.2E-77 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_12920 7131266d4aded204d5e8c329644a0c0c 218 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 204 1.1E-85 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 N288_12920 7131266d4aded204d5e8c329644a0c0c 218 Pfam PF06508 Queuosine biosynthesis protein QueC 5 211 1.0E-86 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 N288_12920 7131266d4aded204d5e8c329644a0c0c 218 SUPERFAMILY SSF52402 3 214 2.21E-67 T 12-10-2018 N288_12920 7131266d4aded204d5e8c329644a0c0c 218 PIRSF PIRSF006293 2 217 1.0E-80 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 N288_02530 9ec676b858f8ab549889ce75b7d6a16c 416 Gene3D G3DSA:3.30.70.270 229 405 1.5E-37 T 12-10-2018 N288_02530 9ec676b858f8ab549889ce75b7d6a16c 416 SUPERFAMILY SSF55073 248 403 1.73E-30 T 12-10-2018 IPR029787 Nucleotide cyclase N288_02530 9ec676b858f8ab549889ce75b7d6a16c 416 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 240 405 6.1E-35 T 12-10-2018 IPR000160 GGDEF domain N288_02530 9ec676b858f8ab549889ce75b7d6a16c 416 SMART SM00267 232 405 3.9E-32 T 12-10-2018 IPR000160 GGDEF domain N288_02530 9ec676b858f8ab549889ce75b7d6a16c 416 Pfam PF00990 Diguanylate cyclase, GGDEF domain 243 401 5.5E-31 T 12-10-2018 IPR000160 GGDEF domain N288_13805 e5438eb4b6946dd2ef3e223de112c2bc 609 SUPERFAMILY SSF52540 359 605 5.67E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_13805 e5438eb4b6946dd2ef3e223de112c2bc 609 ProSitePatterns PS00211 ABC transporters family signature. 506 520 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_13805 e5438eb4b6946dd2ef3e223de112c2bc 609 SUPERFAMILY SSF90123 30 352 3.79E-82 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_13805 e5438eb4b6946dd2ef3e223de112c2bc 609 Gene3D G3DSA:1.20.1560.10 20 356 2.9E-95 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_13805 e5438eb4b6946dd2ef3e223de112c2bc 609 Pfam PF00005 ABC transporter 388 534 3.2E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_13805 e5438eb4b6946dd2ef3e223de112c2bc 609 Gene3D G3DSA:3.40.50.300 366 609 7.4E-84 T 12-10-2018 N288_13805 e5438eb4b6946dd2ef3e223de112c2bc 609 SMART SM00382 395 580 8.3E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_13805 e5438eb4b6946dd2ef3e223de112c2bc 609 Pfam PF00664 ABC transporter transmembrane region 51 324 2.0E-54 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 N288_07395 0d8a1392567a5514cada8993ad970493 290 Gene3D G3DSA:3.40.50.720 2 288 3.6E-90 T 12-10-2018 N288_07395 0d8a1392567a5514cada8993ad970493 290 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 182 210 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_07395 0d8a1392567a5514cada8993ad970493 290 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 56 285 1.7E-58 T 12-10-2018 N288_07395 0d8a1392567a5514cada8993ad970493 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 185 1.3E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07395 0d8a1392567a5514cada8993ad970493 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 233 1.3E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07395 0d8a1392567a5514cada8993ad970493 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 250 270 1.3E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07395 0d8a1392567a5514cada8993ad970493 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 48 65 1.3E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07395 0d8a1392567a5514cada8993ad970493 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 214 1.3E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07395 0d8a1392567a5514cada8993ad970493 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 134 1.3E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07395 0d8a1392567a5514cada8993ad970493 290 SUPERFAMILY SSF51735 45 287 2.0E-82 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_07395 0d8a1392567a5514cada8993ad970493 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 134 4.9E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07395 0d8a1392567a5514cada8993ad970493 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 175 183 4.9E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07395 0d8a1392567a5514cada8993ad970493 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 195 214 4.9E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 Gene3D G3DSA:3.40.50.20 1 116 1.4E-46 T 12-10-2018 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 424 543 5.2E-37 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 SUPERFAMILY SSF56059 128 399 1.68E-106 T 12-10-2018 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 SUPERFAMILY SSF48108 395 550 5.89E-41 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 SUPERFAMILY SSF56059 669 925 8.49E-74 T 12-10-2018 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 965 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 Gene3D G3DSA:3.30.470.20 120 401 1.3E-120 T 12-10-2018 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1022 12.07 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 705 719 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 Gene3D G3DSA:3.30.1490.20 682 748 2.4E-78 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 Gene3D G3DSA:3.40.50.20 550 658 5.0E-45 T 12-10-2018 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 669 863 1.9E-32 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 6.2E-78 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 Gene3D G3DSA:3.30.470.20 663 923 2.4E-78 T 12-10-2018 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 SUPERFAMILY SSF52440 553 671 2.16E-44 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 SMART SM01096 420 543 3.1E-49 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 SUPERFAMILY SSF52440 1 127 6.04E-47 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 Gene3D G3DSA:1.10.1030.10 413 549 2.7E-39 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.2E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.2E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.2E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.2E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 8.2E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.2E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_07500 43a6c2e6928c753b75e0665e3f430e27 1037 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 8.2E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_16110 9c10817421faee0a7bff5b5ffb9b41e4 233 Pfam PF01048 Phosphorylase superfamily 16 222 2.0E-41 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 N288_16110 9c10817421faee0a7bff5b5ffb9b41e4 233 Gene3D G3DSA:3.40.50.1580 2 233 5.3E-74 T 12-10-2018 N288_16110 9c10817421faee0a7bff5b5ffb9b41e4 233 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 231 6.0E-111 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 N288_16110 9c10817421faee0a7bff5b5ffb9b41e4 233 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 N288_16110 9c10817421faee0a7bff5b5ffb9b41e4 233 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 233 48.216 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 N288_16110 9c10817421faee0a7bff5b5ffb9b41e4 233 SUPERFAMILY SSF53167 2 232 1.57E-93 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 N288_06115 2cfd1611a98c544583c1ac43fe9528f9 229 SUPERFAMILY SSF52172 1 122 1.12E-41 T 12-10-2018 IPR011006 CheY-like superfamily N288_06115 2cfd1611a98c544583c1ac43fe9528f9 229 Gene3D G3DSA:1.10.10.10 126 229 1.3E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_06115 2cfd1611a98c544583c1ac43fe9528f9 229 SMART SM00862 146 222 2.8E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_06115 2cfd1611a98c544583c1ac43fe9528f9 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 1.3E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_06115 2cfd1611a98c544583c1ac43fe9528f9 229 Pfam PF00072 Response regulator receiver domain 1 110 2.0E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_06115 2cfd1611a98c544583c1ac43fe9528f9 229 SMART SM00448 1 109 2.2E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_06115 2cfd1611a98c544583c1ac43fe9528f9 229 Gene3D G3DSA:3.40.50.2300 1 125 5.7E-37 T 12-10-2018 N288_06115 2cfd1611a98c544583c1ac43fe9528f9 229 SUPERFAMILY SSF46894 123 223 5.39E-29 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_02805 63af30abad256bd56eb564606aea7428 172 Pfam PF11181 Heat induced stress protein YflT 6 113 9.8E-25 T 12-10-2018 IPR025889 General stress protein 17M-like domain N288_02805 63af30abad256bd56eb564606aea7428 172 ProDom PD458455 UPF0355 MW0363 SE2351 MRSA252 SSP2326 SH2586 SA0372 SAV0387 SACOL0457 SERP0066 6 118 2.0E-4 T 12-10-2018 N288_14365 b4114e552334970b35418492c0021e5d 392 SMART SM00833 257 372 2.8E-52 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal N288_14365 b4114e552334970b35418492c0021e5d 392 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 211 2.4E-57 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain N288_14365 b4114e552334970b35418492c0021e5d 392 Gene3D G3DSA:3.40.50.300 3 230 3.2E-73 T 12-10-2018 N288_14365 b4114e552334970b35418492c0021e5d 392 SUPERFAMILY SSF52540 3 300 2.04E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_14365 b4114e552334970b35418492c0021e5d 392 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 257 372 1.3E-26 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal N288_00455 d4a4e257e68e683c02f6cc5df4524448 307 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 291 1.1E-71 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme N288_00455 d4a4e257e68e683c02f6cc5df4524448 307 SUPERFAMILY SSF53686 3 304 1.02E-105 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme N288_00455 d4a4e257e68e683c02f6cc5df4524448 307 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 N288_00455 d4a4e257e68e683c02f6cc5df4524448 307 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 303 1.0E-137 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 N288_00455 d4a4e257e68e683c02f6cc5df4524448 307 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 303 4.8E-146 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 N288_00455 d4a4e257e68e683c02f6cc5df4524448 307 Gene3D G3DSA:3.40.50.1100 7 299 8.0E-125 T 12-10-2018 N288_00455 d4a4e257e68e683c02f6cc5df4524448 307 Gene3D G3DSA:3.40.50.1100 46 144 8.0E-125 T 12-10-2018 N288_18615 3518064ab6ab77b0ca6738736a860cc6 598 Pfam PF01432 Peptidase family M3 205 583 2.0E-21 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 N288_18615 3518064ab6ab77b0ca6738736a860cc6 598 Pfam PF08439 Oligopeptidase F 120 183 9.2E-11 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain N288_18615 3518064ab6ab77b0ca6738736a860cc6 598 Gene3D G3DSA:1.20.140.70 24 166 2.5E-8 T 12-10-2018 N288_18615 3518064ab6ab77b0ca6738736a860cc6 598 Gene3D G3DSA:1.10.1370.20 227 598 1.6E-118 T 12-10-2018 N288_18615 3518064ab6ab77b0ca6738736a860cc6 598 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 10 595 4.1E-203 T 12-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 N288_18615 3518064ab6ab77b0ca6738736a860cc6 598 SUPERFAMILY SSF55486 54 596 4.12E-96 T 12-10-2018 N288_03865 95de8193ec06cb759ecd2f8e36a81aa2 254 Gene3D G3DSA:3.90.1560.10 19 249 1.7E-38 T 12-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 N288_03865 95de8193ec06cb759ecd2f8e36a81aa2 254 Pfam PF04029 2-phosphosulpholactate phosphatase 24 242 4.2E-24 T 12-10-2018 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 N288_03865 95de8193ec06cb759ecd2f8e36a81aa2 254 SUPERFAMILY SSF142823 8 246 8.76E-44 T 12-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 N288_19350 8e77c82ea71c3b172f726bd2739e1ed1 253 SUPERFAMILY SSF46548 114 239 8.2E-27 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 N288_19350 8e77c82ea71c3b172f726bd2739e1ed1 253 Gene3D G3DSA:3.10.20.30 1 112 7.4E-32 T 12-10-2018 IPR012675 Beta-grasp domain superfamily N288_19350 8e77c82ea71c3b172f726bd2739e1ed1 253 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 234 8.9E-41 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 N288_19350 8e77c82ea71c3b172f726bd2739e1ed1 253 SUPERFAMILY SSF54292 4 112 7.27E-24 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 N288_19350 8e77c82ea71c3b172f726bd2739e1ed1 253 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 155 166 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site N288_19350 8e77c82ea71c3b172f726bd2739e1ed1 253 Gene3D G3DSA:1.10.1060.10 114 248 3.3E-29 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 N288_19350 8e77c82ea71c3b172f726bd2739e1ed1 253 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 117 4.7E-29 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 N288_19350 8e77c82ea71c3b172f726bd2739e1ed1 253 Pfam PF13183 4Fe-4S dicluster domain 151 226 4.5E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain N288_02400 b3dfb609e768ec8c0ea3bec11c2789af 141 Gene3D G3DSA:2.20.25.10 4 42 4.2E-11 T 12-10-2018 N288_02400 b3dfb609e768ec8c0ea3bec11c2789af 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 5 139 1.3E-47 T 12-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 N288_02400 b3dfb609e768ec8c0ea3bec11c2789af 141 Pfam PF02566 OsmC-like protein 44 137 2.9E-17 T 12-10-2018 IPR003718 OsmC/Ohr family N288_02400 b3dfb609e768ec8c0ea3bec11c2789af 141 SUPERFAMILY SSF82784 2 139 1.83E-33 T 12-10-2018 IPR036102 OsmC/Ohr superfamily N288_02400 b3dfb609e768ec8c0ea3bec11c2789af 141 Gene3D G3DSA:3.30.300.20 47 140 4.4E-32 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta N288_20625 57ecdc67723c1c1a8c54602687c425b4 361 Pfam PF02898 Nitric oxide synthase, oxygenase domain 3 358 4.7E-170 T 12-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 N288_20625 57ecdc67723c1c1a8c54602687c425b4 361 Gene3D G3DSA:3.90.340.10 4 352 5.8E-153 T 12-10-2018 N288_20625 57ecdc67723c1c1a8c54602687c425b4 361 ProSitePatterns PS60001 Nitric oxide synthase (NOS) signature. 64 71 - T 12-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 N288_20625 57ecdc67723c1c1a8c54602687c425b4 361 Gene3D G3DSA:3.90.1230.10 191 297 5.8E-153 T 12-10-2018 N288_20625 57ecdc67723c1c1a8c54602687c425b4 361 PIRSF PIRSF037219 1 361 6.9E-179 T 12-10-2018 IPR017142 Nitric oxide synthase, oxygenase subunit GO:0004517|GO:0006809|GO:0020037 KEGG: 00220+1.14.14.47|KEGG: 00330+1.14.14.47 N288_20625 57ecdc67723c1c1a8c54602687c425b4 361 Gene3D G3DSA:3.90.440.10 81 190 5.8E-153 T 12-10-2018 N288_20625 57ecdc67723c1c1a8c54602687c425b4 361 SUPERFAMILY SSF56512 3 359 3.01E-165 T 12-10-2018 IPR036119 Nitric oxide synthase, N-terminal domain superfamily GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 N288_14495 d2033c98ca7600f68cb9576a86e1db83 334 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 49 322 9.6E-73 T 12-10-2018 IPR010897 Sporulation stage II, protein P N288_14495 d2033c98ca7600f68cb9576a86e1db83 334 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 121 326 2.1E-68 T 12-10-2018 IPR010897 Sporulation stage II, protein P N288_14495 d2033c98ca7600f68cb9576a86e1db83 334 SUPERFAMILY SSF53187 205 325 1.38E-7 T 12-10-2018 N288_20885 bc5300a0633408dafd3447f48afe4d11 258 Pfam PF01497 Periplasmic binding protein 3 232 1.2E-26 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain N288_20885 bc5300a0633408dafd3447f48afe4d11 258 Gene3D G3DSA:3.40.50.1980 1 118 6.0E-24 T 12-10-2018 N288_20885 bc5300a0633408dafd3447f48afe4d11 258 Gene3D G3DSA:3.40.50.1980 122 255 2.1E-26 T 12-10-2018 N288_20885 bc5300a0633408dafd3447f48afe4d11 258 SUPERFAMILY SSF53807 2 256 1.45E-55 T 12-10-2018 N288_26000 20607608775c6abd442b8c3265931641 238 Pfam PF02527 rRNA small subunit methyltransferase G 21 202 6.6E-58 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 N288_26000 20607608775c6abd442b8c3265931641 238 PIRSF PIRSF003078 1 220 6.8E-58 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 N288_26000 20607608775c6abd442b8c3265931641 238 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 214 28.615 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 N288_26000 20607608775c6abd442b8c3265931641 238 SUPERFAMILY SSF53335 1 237 1.27E-51 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_26000 20607608775c6abd442b8c3265931641 238 Gene3D G3DSA:3.40.50.150 1 238 2.6E-89 T 12-10-2018 N288_26000 20607608775c6abd442b8c3265931641 238 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 215 9.7E-53 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 N288_16665 dbf0a9262fccbbac31b10e2302194e8c 231 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 32 224 5.9E-50 T 12-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 N288_16665 dbf0a9262fccbbac31b10e2302194e8c 231 Pfam PF04973 Nicotinamide mononucleotide transporter 33 221 4.7E-45 T 12-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 N288_06345 bbddaafe9ef9c778a2cff744327959ab 396 TIGRFAM TIGR00937 2A51: chromate efflux transporter 21 390 9.0E-110 T 12-10-2018 IPR014047 Chromate transporter, long chain N288_06345 bbddaafe9ef9c778a2cff744327959ab 396 Pfam PF02417 Chromate transporter 228 389 5.0E-41 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 N288_06345 bbddaafe9ef9c778a2cff744327959ab 396 Pfam PF02417 Chromate transporter 14 177 2.5E-31 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 N288_06345 bbddaafe9ef9c778a2cff744327959ab 396 PIRSF PIRSF004810 1 396 2.3E-131 T 12-10-2018 IPR014047 Chromate transporter, long chain N288_25935 871208cf7f3102e34e67606f49cfe4c0 95 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 6.5E-33 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_25935 871208cf7f3102e34e67606f49cfe4c0 95 Gene3D G3DSA:3.30.70.60 1 95 2.9E-35 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 N288_25935 871208cf7f3102e34e67606f49cfe4c0 95 SUPERFAMILY SSF54995 1 94 1.31E-34 T 12-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_25935 871208cf7f3102e34e67606f49cfe4c0 95 Pfam PF01250 Ribosomal protein S6 3 92 9.8E-30 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_25935 871208cf7f3102e34e67606f49cfe4c0 95 ProSitePatterns PS01048 Ribosomal protein S6 signature. 44 53 - T 12-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 N288_25935 871208cf7f3102e34e67606f49cfe4c0 95 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 23.574 T 12-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 N288_04370 7b7c30bf7185b487956c3adb400ef706 214 SMART SM00267 49 211 5.0E-32 T 12-10-2018 IPR000160 GGDEF domain N288_04370 7b7c30bf7185b487956c3adb400ef706 214 Pfam PF00990 Diguanylate cyclase, GGDEF domain 62 212 8.8E-39 T 12-10-2018 IPR000160 GGDEF domain N288_04370 7b7c30bf7185b487956c3adb400ef706 214 Gene3D G3DSA:3.30.70.270 50 214 8.2E-43 T 12-10-2018 N288_04370 7b7c30bf7185b487956c3adb400ef706 214 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 59 212 1.3E-42 T 12-10-2018 IPR000160 GGDEF domain N288_04370 7b7c30bf7185b487956c3adb400ef706 214 SUPERFAMILY SSF55073 65 212 2.75E-38 T 12-10-2018 IPR029787 Nucleotide cyclase N288_01675 6cc701abb462afb3afa04d467e098760 239 Gene3D G3DSA:3.30.470.20 85 221 8.9E-96 T 12-10-2018 N288_01675 6cc701abb462afb3afa04d467e098760 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 235 32.702 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 N288_01675 6cc701abb462afb3afa04d467e098760 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 N288_01675 6cc701abb462afb3afa04d467e098760 239 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 N288_01675 6cc701abb462afb3afa04d467e098760 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 236 3.1E-76 T 12-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 N288_01675 6cc701abb462afb3afa04d467e098760 239 SUPERFAMILY SSF56104 4 237 9.48E-80 T 12-10-2018 N288_01675 6cc701abb462afb3afa04d467e098760 239 Gene3D G3DSA:3.30.200.20 7 232 8.9E-96 T 12-10-2018 N288_01675 6cc701abb462afb3afa04d467e098760 239 Pfam PF01259 SAICAR synthetase 7 231 3.3E-64 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 N288_12495 d93442ae24524dff6652b9839601c3f0 325 SUPERFAMILY SSF50891 178 293 2.09E-11 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily N288_12495 d93442ae24524dff6652b9839601c3f0 325 SMART SM00797 24 303 2.4E-128 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B N288_12495 d93442ae24524dff6652b9839601c3f0 325 Gene3D G3DSA:2.40.100.10 175 315 2.1E-50 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily N288_12495 d93442ae24524dff6652b9839601c3f0 325 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 25 286 4.5E-90 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B N288_12495 d93442ae24524dff6652b9839601c3f0 325 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 314 6.8E-95 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 307 321 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 166 179 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 SUPERFAMILY SSF53067 160 351 3.56E-67 T 12-10-2018 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 Pfam PF00012 Hsp70 protein 4 573 2.1E-245 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 Gene3D G3DSA:3.30.420.40 159 337 1.2E-152 T 12-10-2018 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 573 2.2E-283 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 SUPERFAMILY SSF53067 1 157 6.8E-57 T 12-10-2018 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 PRINTS PR00301 70kDa heat shock protein signature 335 355 1.9E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 PRINTS PR00301 70kDa heat shock protein signature 304 320 1.9E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 PRINTS PR00301 70kDa heat shock protein signature 172 182 1.9E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.9E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 PRINTS PR00301 70kDa heat shock protein signature 439 455 1.9E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.9E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 PRINTS PR00301 70kDa heat shock protein signature 358 377 1.9E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.9E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 PRINTS PR00301 70kDa heat shock protein signature 112 132 1.9E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 SUPERFAMILY SSF100920 354 510 8.5E-61 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 SUPERFAMILY SSF100934 477 582 4.97E-14 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 Gene3D G3DSA:3.90.640.10 198 279 1.2E-152 T 12-10-2018 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 Gene3D G3DSA:2.60.34.10 353 493 1.2E-63 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 Gene3D G3DSA:1.20.1270.10 494 580 4.4E-17 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 Gene3D G3DSA:3.30.420.40 5 347 1.2E-152 T 12-10-2018 N288_18485 fd2605b173de98bd5e6c4f2e4ebf60ff 609 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 603 36.987 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 N288_09100 a28d2c5f424da125872eccbe2fec8f3c 200 Gene3D G3DSA:1.10.10.60 8 95 4.2E-6 T 12-10-2018 N288_09100 a28d2c5f424da125872eccbe2fec8f3c 200 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 3 79 1.3E-44 T 12-10-2018 IPR014243 Transcription factor, RsfA N288_09100 a28d2c5f424da125872eccbe2fec8f3c 200 SMART SM00717 5 59 0.0053 T 12-10-2018 IPR001005 SANT/Myb domain N288_09100 a28d2c5f424da125872eccbe2fec8f3c 200 SUPERFAMILY SSF46689 6 62 3.35E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_09100 a28d2c5f424da125872eccbe2fec8f3c 200 Pfam PF13921 Myb-like DNA-binding domain 9 62 2.6E-6 T 12-10-2018 N288_18745 427bacea764c8c1095ce072d91df7c17 44 Pfam PF13056 Protein of unknown function (DUF3918) 1 43 6.2E-22 T 12-10-2018 IPR025029 Protein of unknown function DUF3918 N288_21915 e31ae2adbd0f4a5ea087d89275e4c98e 288 PIRSF PIRSF006483 4 288 3.4E-91 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT N288_21915 e31ae2adbd0f4a5ea087d89275e4c98e 288 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 19 222 1.4E-67 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT N288_21915 e31ae2adbd0f4a5ea087d89275e4c98e 288 Gene3D G3DSA:3.30.70.120 200 275 4.5E-26 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal N288_21915 e31ae2adbd0f4a5ea087d89275e4c98e 288 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 228 282 4.0E-22 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 N288_12605 a8f6ec3939c7423d348c092f85ce4146 312 SUPERFAMILY SSF48179 179 302 7.48E-24 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_12605 a8f6ec3939c7423d348c092f85ce4146 312 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 304 1.5E-65 T 12-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 N288_12605 a8f6ec3939c7423d348c092f85ce4146 312 SUPERFAMILY SSF51735 1 183 5.07E-13 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_12605 a8f6ec3939c7423d348c092f85ce4146 312 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 152 4.5E-37 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain N288_12605 a8f6ec3939c7423d348c092f85ce4146 312 Gene3D G3DSA:1.10.1040.10 178 302 1.9E-28 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 N288_12605 a8f6ec3939c7423d348c092f85ce4146 312 Gene3D G3DSA:3.40.50.720 1 174 8.8E-50 T 12-10-2018 N288_12605 a8f6ec3939c7423d348c092f85ce4146 312 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 179 299 1.4E-23 T 12-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain N288_18755 2c5fc9ffba736c5ed3b347256a7de862 157 SUPERFAMILY SSF50346 3 63 1.55E-8 T 12-10-2018 IPR011033 PRC-barrel-like superfamily N288_18755 2c5fc9ffba736c5ed3b347256a7de862 157 Gene3D G3DSA:2.30.30.240 1 71 7.9E-7 T 12-10-2018 N288_18755 2c5fc9ffba736c5ed3b347256a7de862 157 Pfam PF05239 PRC-barrel domain 5 71 6.2E-13 T 12-10-2018 IPR027275 PRC-barrel domain N288_18755 2c5fc9ffba736c5ed3b347256a7de862 157 Pfam PF05239 PRC-barrel domain 87 155 1.3E-6 T 12-10-2018 IPR027275 PRC-barrel domain N288_18755 2c5fc9ffba736c5ed3b347256a7de862 157 SUPERFAMILY SSF50346 89 154 8.63E-7 T 12-10-2018 IPR011033 PRC-barrel-like superfamily N288_23840 4a06fde3ccd9eaf15395b1bfe1473cf1 357 Gene3D G3DSA:3.30.70.1660 110 340 8.8E-96 T 12-10-2018 N288_23840 4a06fde3ccd9eaf15395b1bfe1473cf1 357 Gene3D G3DSA:3.30.160.20 209 295 8.8E-96 T 12-10-2018 N288_23840 4a06fde3ccd9eaf15395b1bfe1473cf1 357 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 N288_23840 4a06fde3ccd9eaf15395b1bfe1473cf1 357 SMART SM00937 63 177 5.9E-63 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 N288_23840 4a06fde3ccd9eaf15395b1bfe1473cf1 357 Pfam PF03462 PCRF domain 9 202 1.3E-72 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 N288_23840 4a06fde3ccd9eaf15395b1bfe1473cf1 357 Gene3D G3DSA:1.20.58.410 4 100 1.5E-9 T 12-10-2018 N288_23840 4a06fde3ccd9eaf15395b1bfe1473cf1 357 SUPERFAMILY SSF75620 8 351 3.92E-133 T 12-10-2018 N288_23840 4a06fde3ccd9eaf15395b1bfe1473cf1 357 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 40.618 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 N288_23840 4a06fde3ccd9eaf15395b1bfe1473cf1 357 Pfam PF00472 RF-1 domain 210 319 2.5E-40 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 N288_23840 4a06fde3ccd9eaf15395b1bfe1473cf1 357 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 355 1.5E-168 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 N288_09595 ef5a3c454d84b3a3c5a37377d23f02a2 249 Gene3D G3DSA:3.40.1280.10 1 167 1.8E-69 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal N288_09595 ef5a3c454d84b3a3c5a37377d23f02a2 249 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 24 223 1.4E-72 T 12-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 N288_09595 ef5a3c454d84b3a3c5a37377d23f02a2 249 PIRSF PIRSF000386 2 249 2.8E-105 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 N288_09595 ef5a3c454d84b3a3c5a37377d23f02a2 249 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 2 235 1.3E-102 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 N288_09595 ef5a3c454d84b3a3c5a37377d23f02a2 249 Gene3D G3DSA:1.10.1270.20 168 249 9.0E-34 T 12-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 N288_09595 ef5a3c454d84b3a3c5a37377d23f02a2 249 SUPERFAMILY SSF75217 2 247 1.05E-102 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases N288_09595 ef5a3c454d84b3a3c5a37377d23f02a2 249 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 249 114.694 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 N288_13880 f97c5eec8f8d3157c643f9f7c8d6a797 218 Gene3D G3DSA:1.10.10.10 4 78 1.4E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_13880 f97c5eec8f8d3157c643f9f7c8d6a797 218 SUPERFAMILY SSF46785 12 103 1.02E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_13880 f97c5eec8f8d3157c643f9f7c8d6a797 218 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 77 4.7E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_13880 f97c5eec8f8d3157c643f9f7c8d6a797 218 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 7.5E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_13880 f97c5eec8f8d3157c643f9f7c8d6a797 218 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 7.5E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_13880 f97c5eec8f8d3157c643f9f7c8d6a797 218 SMART SM00345 19 77 8.7E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_13880 f97c5eec8f8d3157c643f9f7c8d6a797 218 Pfam PF07729 FCD domain 94 204 1.7E-14 T 12-10-2018 IPR011711 GntR, C-terminal N288_13880 f97c5eec8f8d3157c643f9f7c8d6a797 218 SUPERFAMILY SSF48008 83 213 4.71E-15 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal N288_13880 f97c5eec8f8d3157c643f9f7c8d6a797 218 Gene3D G3DSA:1.20.120.530 81 215 2.4E-18 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal N288_13880 f97c5eec8f8d3157c643f9f7c8d6a797 218 SMART SM00895 87 209 0.0015 T 12-10-2018 IPR011711 GntR, C-terminal N288_06685 8c6556aa1b32a484bf075f3e5d979db9 173 PIRSF PIRSF004682 1 167 3.5E-54 T 12-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 N288_06685 8c6556aa1b32a484bf075f3e5d979db9 173 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 145 5.4E-41 T 12-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 N288_06685 8c6556aa1b32a484bf075f3e5d979db9 173 SUPERFAMILY SSF56784 1 167 6.2E-41 T 12-10-2018 IPR036412 HAD-like superfamily N288_06685 8c6556aa1b32a484bf075f3e5d979db9 173 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 3 147 2.6E-32 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 N288_06685 8c6556aa1b32a484bf075f3e5d979db9 173 Gene3D G3DSA:3.40.50.1000 1 170 4.4E-54 T 12-10-2018 IPR023214 HAD superfamily N288_06685 8c6556aa1b32a484bf075f3e5d979db9 173 Pfam PF13242 HAD-hyrolase-like 103 156 9.6E-12 T 12-10-2018 N288_01040 379c674c3734178794d5f66c30fb0ddb 187 Pfam PF08281 Sigma-70, region 4 129 180 3.7E-16 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_01040 379c674c3734178794d5f66c30fb0ddb 187 TIGRFAM TIGR02948 SigW_bacill: RNA polymerase sigma-W factor 1 187 4.7E-104 T 12-10-2018 IPR014294 RNA polymerase sigma-W, bacillaceae N288_01040 379c674c3734178794d5f66c30fb0ddb 187 SUPERFAMILY SSF88659 117 184 2.24E-18 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_01040 379c674c3734178794d5f66c30fb0ddb 187 SUPERFAMILY SSF88946 8 99 5.02E-30 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_01040 379c674c3734178794d5f66c30fb0ddb 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 45 76 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_01040 379c674c3734178794d5f66c30fb0ddb 187 Gene3D G3DSA:1.10.10.10 105 186 2.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_01040 379c674c3734178794d5f66c30fb0ddb 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 184 1.3E-36 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_01040 379c674c3734178794d5f66c30fb0ddb 187 Gene3D G3DSA:1.10.1740.10 5 104 2.7E-32 T 12-10-2018 N288_01040 379c674c3734178794d5f66c30fb0ddb 187 Pfam PF04542 Sigma-70 region 2 24 89 2.5E-21 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_19575 ee6c78604fc944ff86d9e3a9ae6b6050 322 Gene3D G3DSA:3.30.479.30 85 192 7.6E-21 T 12-10-2018 N288_19575 ee6c78604fc944ff86d9e3a9ae6b6050 322 Pfam PF01145 SPFH domain / Band 7 family 30 217 1.1E-24 T 12-10-2018 IPR001107 Band 7 domain N288_19575 ee6c78604fc944ff86d9e3a9ae6b6050 322 SUPERFAMILY SSF117892 60 195 2.62E-21 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily N288_19575 ee6c78604fc944ff86d9e3a9ae6b6050 322 SMART SM00244 26 202 4.4E-26 T 12-10-2018 IPR001107 Band 7 domain N288_19575 ee6c78604fc944ff86d9e3a9ae6b6050 322 TIGRFAM TIGR01933 hflK: HflK protein 29 302 2.0E-71 T 12-10-2018 IPR010201 HflK GO:0016021 N288_21600 38bcb6bc5b74946c2e70848099e881c2 394 PIRSF PIRSF000724 1 394 5.0E-162 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21600 38bcb6bc5b74946c2e70848099e881c2 394 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 6.0E-98 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21600 38bcb6bc5b74946c2e70848099e881c2 394 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 6.0E-98 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21600 38bcb6bc5b74946c2e70848099e881c2 394 PRINTS PR00477 Phosphoglycerate kinase family signature 190 209 6.0E-98 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21600 38bcb6bc5b74946c2e70848099e881c2 394 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 6.0E-98 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21600 38bcb6bc5b74946c2e70848099e881c2 394 PRINTS PR00477 Phosphoglycerate kinase family signature 167 189 6.0E-98 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21600 38bcb6bc5b74946c2e70848099e881c2 394 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 6.0E-98 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21600 38bcb6bc5b74946c2e70848099e881c2 394 PRINTS PR00477 Phosphoglycerate kinase family signature 312 337 6.0E-98 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21600 38bcb6bc5b74946c2e70848099e881c2 394 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 6.0E-98 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21600 38bcb6bc5b74946c2e70848099e881c2 394 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 6.0E-98 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21600 38bcb6bc5b74946c2e70848099e881c2 394 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 393 43.346 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21600 38bcb6bc5b74946c2e70848099e881c2 394 Pfam PF00162 Phosphoglycerate kinase 6 383 1.1E-167 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21600 38bcb6bc5b74946c2e70848099e881c2 394 Gene3D G3DSA:3.40.50.1260 7 391 2.2E-168 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21600 38bcb6bc5b74946c2e70848099e881c2 394 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 12-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21600 38bcb6bc5b74946c2e70848099e881c2 394 SUPERFAMILY SSF53748 2 393 7.77E-165 T 12-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21600 38bcb6bc5b74946c2e70848099e881c2 394 Gene3D G3DSA:3.40.50.1260 169 383 2.2E-168 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_23405 f0a28ea2b79c8188df20b0fd79318826 183 SUPERFAMILY SSF88659 102 166 9.35E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_23405 f0a28ea2b79c8188df20b0fd79318826 183 Gene3D G3DSA:1.10.1740.10 2 106 1.9E-24 T 12-10-2018 N288_23405 f0a28ea2b79c8188df20b0fd79318826 183 Pfam PF04542 Sigma-70 region 2 10 73 2.2E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_23405 f0a28ea2b79c8188df20b0fd79318826 183 SUPERFAMILY SSF88946 6 86 2.88E-21 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_23405 f0a28ea2b79c8188df20b0fd79318826 183 Gene3D G3DSA:1.10.10.10 107 167 6.8E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_23405 f0a28ea2b79c8188df20b0fd79318826 183 Pfam PF08281 Sigma-70, region 4 109 158 3.9E-13 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_23405 f0a28ea2b79c8188df20b0fd79318826 183 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 164 1.7E-30 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_03100 579fe0d6d0c283ce04abffd7633c0db6 485 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 448 8.4E-145 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_03100 579fe0d6d0c283ce04abffd7633c0db6 485 PRINTS PR00175 Sodium/alanine symporter signature 295 313 1.6E-58 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_03100 579fe0d6d0c283ce04abffd7633c0db6 485 PRINTS PR00175 Sodium/alanine symporter signature 417 437 1.6E-58 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_03100 579fe0d6d0c283ce04abffd7633c0db6 485 PRINTS PR00175 Sodium/alanine symporter signature 176 194 1.6E-58 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_03100 579fe0d6d0c283ce04abffd7633c0db6 485 PRINTS PR00175 Sodium/alanine symporter signature 86 108 1.6E-58 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_03100 579fe0d6d0c283ce04abffd7633c0db6 485 PRINTS PR00175 Sodium/alanine symporter signature 204 223 1.6E-58 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_03100 579fe0d6d0c283ce04abffd7633c0db6 485 PRINTS PR00175 Sodium/alanine symporter signature 354 376 1.6E-58 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_03100 579fe0d6d0c283ce04abffd7633c0db6 485 Pfam PF01235 Sodium:alanine symporter family 49 460 4.9E-157 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_00605 b6ba9ced54cb7fe3473431d8b3eae48b 460 Pfam PF13481 AAA domain 79 224 3.1E-16 T 12-10-2018 N288_00605 b6ba9ced54cb7fe3473431d8b3eae48b 460 SUPERFAMILY SSF54211 257 459 4.17E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_00605 b6ba9ced54cb7fe3473431d8b3eae48b 460 Gene3D G3DSA:3.30.230.10 328 459 6.1E-20 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup N288_00605 b6ba9ced54cb7fe3473431d8b3eae48b 460 PRINTS PR01874 DNA repair protein radA signature 10 34 7.7E-94 T 12-10-2018 N288_00605 b6ba9ced54cb7fe3473431d8b3eae48b 460 PRINTS PR01874 DNA repair protein radA signature 84 112 7.7E-94 T 12-10-2018 N288_00605 b6ba9ced54cb7fe3473431d8b3eae48b 460 PRINTS PR01874 DNA repair protein radA signature 126 143 7.7E-94 T 12-10-2018 N288_00605 b6ba9ced54cb7fe3473431d8b3eae48b 460 PRINTS PR01874 DNA repair protein radA signature 324 347 7.7E-94 T 12-10-2018 N288_00605 b6ba9ced54cb7fe3473431d8b3eae48b 460 PRINTS PR01874 DNA repair protein radA signature 176 200 7.7E-94 T 12-10-2018 N288_00605 b6ba9ced54cb7fe3473431d8b3eae48b 460 PRINTS PR01874 DNA repair protein radA signature 250 276 7.7E-94 T 12-10-2018 N288_00605 b6ba9ced54cb7fe3473431d8b3eae48b 460 PRINTS PR01874 DNA repair protein radA signature 215 243 7.7E-94 T 12-10-2018 N288_00605 b6ba9ced54cb7fe3473431d8b3eae48b 460 SMART SM00382 92 246 1.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_00605 b6ba9ced54cb7fe3473431d8b3eae48b 460 Hamap MF_01498 DNA repair protein RadA [radA]. 21 458 45.258 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 N288_00605 b6ba9ced54cb7fe3473431d8b3eae48b 460 Gene3D G3DSA:3.40.50.300 68 292 3.3E-42 T 12-10-2018 N288_00605 b6ba9ced54cb7fe3473431d8b3eae48b 460 SUPERFAMILY SSF52540 66 271 4.0E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00605 b6ba9ced54cb7fe3473431d8b3eae48b 460 Pfam PF13541 Subunit ChlI of Mg-chelatase 368 432 4.2E-10 T 12-10-2018 N288_00605 b6ba9ced54cb7fe3473431d8b3eae48b 460 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 6.8E-217 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 N288_00380 8b01587dc63ec153eadfc12285735ebd 100 Pfam PF07873 YabP family 17 82 1.9E-19 T 12-10-2018 IPR022476 Sporulation protein YabP/YqfC N288_00380 8b01587dc63ec153eadfc12285735ebd 100 PIRSF PIRSF011576 1 100 1.0E-53 T 12-10-2018 IPR012504 Sporulation protein YabP N288_00380 8b01587dc63ec153eadfc12285735ebd 100 Gene3D G3DSA:2.60.40.2000 25 82 5.6E-24 T 12-10-2018 IPR038705 YabP superfamily N288_00380 8b01587dc63ec153eadfc12285735ebd 100 TIGRFAM TIGR02892 spore_yabP: sporulation protein YabP 17 100 2.3E-34 T 12-10-2018 IPR012504 Sporulation protein YabP N288_00380 8b01587dc63ec153eadfc12285735ebd 100 ProDom PD067726 YABP B.SUBTILIS PRECURSOR UNCHARACTERIZED BH0074 SIGNAL CPE2477 PROTEIN 16 100 5.0E-37 T 12-10-2018 IPR012504 Sporulation protein YabP N288_04065 94a2a935562c694e8ec4df42aad51876 823 Pfam PF04411 PD-(D/E)XK nuclease superfamily 401 556 1.3E-51 T 12-10-2018 IPR007505 PD-(D/E)XK nuclease superfamily 7 N288_04065 94a2a935562c694e8ec4df42aad51876 823 Pfam PF09823 Domain of unknown function (DUF2357) 125 378 3.3E-88 T 12-10-2018 IPR018633 Domain of unknown function DUF2357 N288_04360 0f8a2a8d40f27aa7cda9ef5cbd703e5b 211 SUPERFAMILY SSF53335 13 211 9.01E-40 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_04360 0f8a2a8d40f27aa7cda9ef5cbd703e5b 211 Gene3D G3DSA:3.40.50.150 1 211 4.6E-63 T 12-10-2018 N288_04360 0f8a2a8d40f27aa7cda9ef5cbd703e5b 211 Pfam PF01596 O-methyltransferase 14 209 5.2E-48 T 12-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 N288_05140 ade53b9fe046143948b54094ea93db27 331 Pfam PF13377 Periplasmic binding protein-like domain 167 326 2.4E-41 T 12-10-2018 N288_05140 ade53b9fe046143948b54094ea93db27 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.7E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_05140 ade53b9fe046143948b54094ea93db27 331 Gene3D G3DSA:1.10.260.40 1 59 2.1E-20 T 12-10-2018 N288_05140 ade53b9fe046143948b54094ea93db27 331 SMART SM00354 1 71 7.9E-28 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_05140 ade53b9fe046143948b54094ea93db27 331 SUPERFAMILY SSF53822 61 328 7.85E-80 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_05140 ade53b9fe046143948b54094ea93db27 331 Gene3D G3DSA:3.40.50.2300 158 287 5.5E-84 T 12-10-2018 N288_05140 ade53b9fe046143948b54094ea93db27 331 SUPERFAMILY SSF47413 1 60 1.32E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_05140 ade53b9fe046143948b54094ea93db27 331 Gene3D G3DSA:3.40.50.2300 60 307 5.5E-84 T 12-10-2018 N288_13090 f863a8d9a631cedde167f698cbca82cc 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 5.2E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_13090 f863a8d9a631cedde167f698cbca82cc 234 Gene3D G3DSA:3.40.50.2300 2 132 3.9E-35 T 12-10-2018 N288_13090 f863a8d9a631cedde167f698cbca82cc 234 Gene3D G3DSA:1.10.10.10 133 233 8.0E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_13090 f863a8d9a631cedde167f698cbca82cc 234 SUPERFAMILY SSF52172 3 125 1.99E-38 T 12-10-2018 IPR011006 CheY-like superfamily N288_13090 f863a8d9a631cedde167f698cbca82cc 234 Pfam PF00072 Response regulator receiver domain 6 114 7.2E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_13090 f863a8d9a631cedde167f698cbca82cc 234 SMART SM00862 155 231 2.9E-30 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_13090 f863a8d9a631cedde167f698cbca82cc 234 SUPERFAMILY SSF46894 132 232 6.52E-31 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_13090 f863a8d9a631cedde167f698cbca82cc 234 SMART SM00448 4 114 1.9E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_16320 c23e03e747d9bf103544478c045b1fe3 280 Gene3D G3DSA:3.40.50.10170 1 152 3.4E-55 T 12-10-2018 N288_16320 c23e03e747d9bf103544478c045b1fe3 280 Gene3D G3DSA:3.30.1180.10 153 279 4.4E-38 T 12-10-2018 N288_16320 c23e03e747d9bf103544478c045b1fe3 280 SUPERFAMILY SSF82549 2 279 7.32E-94 T 12-10-2018 N288_16320 c23e03e747d9bf103544478c045b1fe3 280 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 279 1.9E-94 T 12-10-2018 IPR003797 DegV N288_16320 c23e03e747d9bf103544478c045b1fe3 280 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 278 2.7E-104 T 12-10-2018 IPR003797 DegV N288_04220 9b2c97b60abade69a6072aa69d71db01 423 Pfam PF02040 Arsenical pump membrane protein 1 420 8.9E-230 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 N288_04220 9b2c97b60abade69a6072aa69d71db01 423 PRINTS PR00758 Arsenical pump membrane protein signature 172 195 1.3E-113 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 N288_04220 9b2c97b60abade69a6072aa69d71db01 423 PRINTS PR00758 Arsenical pump membrane protein signature 212 237 1.3E-113 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 N288_04220 9b2c97b60abade69a6072aa69d71db01 423 PRINTS PR00758 Arsenical pump membrane protein signature 96 120 1.3E-113 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 N288_04220 9b2c97b60abade69a6072aa69d71db01 423 PRINTS PR00758 Arsenical pump membrane protein signature 273 297 1.3E-113 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 N288_04220 9b2c97b60abade69a6072aa69d71db01 423 PRINTS PR00758 Arsenical pump membrane protein signature 392 416 1.3E-113 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 N288_04220 9b2c97b60abade69a6072aa69d71db01 423 PRINTS PR00758 Arsenical pump membrane protein signature 318 340 1.3E-113 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 N288_04220 9b2c97b60abade69a6072aa69d71db01 423 PRINTS PR00758 Arsenical pump membrane protein signature 359 384 1.3E-113 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 N288_04220 9b2c97b60abade69a6072aa69d71db01 423 PRINTS PR00758 Arsenical pump membrane protein signature 139 163 1.3E-113 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 N288_04220 9b2c97b60abade69a6072aa69d71db01 423 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 1 422 3.9E-228 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 N288_21895 6a9e9afd469cfe3aa5fdf4ea2a838749 449 Pfam PF01551 Peptidase family M23 339 442 3.8E-27 T 12-10-2018 IPR016047 Peptidase M23 N288_21895 6a9e9afd469cfe3aa5fdf4ea2a838749 449 SUPERFAMILY SSF51261 313 444 3.56E-37 T 12-10-2018 IPR011055 Duplicated hybrid motif N288_21895 6a9e9afd469cfe3aa5fdf4ea2a838749 449 Gene3D G3DSA:2.70.70.10 241 447 1.1E-33 T 12-10-2018 IPR011055 Duplicated hybrid motif N288_02810 62ffc773957f19d4c88c90b6dec63808 908 Gene3D G3DSA:3.40.50.300 379 606 1.5E-22 T 12-10-2018 N288_02810 62ffc773957f19d4c88c90b6dec63808 908 Gene3D G3DSA:1.25.40.10 29 174 2.2E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_02810 62ffc773957f19d4c88c90b6dec63808 908 SUPERFAMILY SSF48452 39 168 7.05E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_02810 62ffc773957f19d4c88c90b6dec63808 908 Pfam PF01926 50S ribosome-binding GTPase 379 517 1.5E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_02810 62ffc773957f19d4c88c90b6dec63808 908 SUPERFAMILY SSF52540 376 570 1.38E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_06445 71e144611890406f66be82d4f5437de2 219 Pfam PF02310 B12 binding domain 93 180 4.8E-13 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 N288_06445 71e144611890406f66be82d4f5437de2 219 SUPERFAMILY SSF47644 3 62 5.62E-6 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_06445 71e144611890406f66be82d4f5437de2 219 Pfam PF02607 B12 binding domain 5 72 4.3E-11 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_06445 71e144611890406f66be82d4f5437de2 219 SUPERFAMILY SSF52242 91 184 7.59E-17 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 N288_06445 71e144611890406f66be82d4f5437de2 219 Gene3D G3DSA:3.40.50.280 88 204 2.3E-23 T 12-10-2018 N288_06445 71e144611890406f66be82d4f5437de2 219 Gene3D G3DSA:1.10.1240.10 2 78 1.5E-12 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_11285 ed37907a54ea553857414c90db8039f9 257 Gene3D G3DSA:3.90.226.10 1 199 1.8E-75 T 12-10-2018 N288_11285 ed37907a54ea553857414c90db8039f9 257 SUPERFAMILY SSF52096 1 254 2.49E-83 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_11285 ed37907a54ea553857414c90db8039f9 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 254 2.2E-66 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 N288_11285 ed37907a54ea553857414c90db8039f9 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 N288_11285 ed37907a54ea553857414c90db8039f9 257 Gene3D G3DSA:1.10.12.10 200 256 2.8E-18 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal N288_20955 ced49a84397d1d7644c4bdc949566a1e 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.3E-8 T 12-10-2018 N288_20955 ced49a84397d1d7644c4bdc949566a1e 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 4.3E-8 T 12-10-2018 N288_20955 ced49a84397d1d7644c4bdc949566a1e 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 273 4.3E-8 T 12-10-2018 N288_20955 ced49a84397d1d7644c4bdc949566a1e 355 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 284 3.3E-37 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 N288_20955 ced49a84397d1d7644c4bdc949566a1e 355 SUPERFAMILY SSF51905 1 305 8.64E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_20955 ced49a84397d1d7644c4bdc949566a1e 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 2.9E-9 T 12-10-2018 N288_20955 ced49a84397d1d7644c4bdc949566a1e 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 251 273 2.9E-9 T 12-10-2018 N288_20955 ced49a84397d1d7644c4bdc949566a1e 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 96 114 2.9E-9 T 12-10-2018 N288_20955 ced49a84397d1d7644c4bdc949566a1e 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.9E-9 T 12-10-2018 N288_20955 ced49a84397d1d7644c4bdc949566a1e 355 Gene3D G3DSA:3.50.50.100 1 355 2.3E-77 T 12-10-2018 N288_23285 7c4234bebb2e4e6e3b09dc46bdb80828 441 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 20 427 7.3E-131 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 N288_23285 7c4234bebb2e4e6e3b09dc46bdb80828 441 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 335 430 2.4E-20 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 N288_23285 7c4234bebb2e4e6e3b09dc46bdb80828 441 SUPERFAMILY SSF48179 217 310 1.87E-29 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_23285 7c4234bebb2e4e6e3b09dc46bdb80828 441 Gene3D G3DSA:3.40.50.720 4 211 3.8E-68 T 12-10-2018 N288_23285 7c4234bebb2e4e6e3b09dc46bdb80828 441 Gene3D G3DSA:3.40.50.720 217 438 3.7E-63 T 12-10-2018 N288_23285 7c4234bebb2e4e6e3b09dc46bdb80828 441 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 218 308 3.7E-28 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 N288_23285 7c4234bebb2e4e6e3b09dc46bdb80828 441 SMART SM00984 335 431 4.3E-28 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 N288_23285 7c4234bebb2e4e6e3b09dc46bdb80828 441 PIRSF PIRSF500136 9 440 3.2E-160 T 12-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 N288_23285 7c4234bebb2e4e6e3b09dc46bdb80828 441 PIRSF PIRSF000124 20 438 7.9E-65 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 N288_23285 7c4234bebb2e4e6e3b09dc46bdb80828 441 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 21 196 2.6E-44 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 N288_23285 7c4234bebb2e4e6e3b09dc46bdb80828 441 SUPERFAMILY SSF51735 22 210 2.28E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_23285 7c4234bebb2e4e6e3b09dc46bdb80828 441 SUPERFAMILY SSF52413 320 430 2.49E-24 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 N288_16845 79681dccb9c2a32acba10395f31592bc 215 Pfam PF00633 Helix-hairpin-helix motif 100 128 3.3E-10 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 N288_16845 79681dccb9c2a32acba10395f31592bc 215 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 N288_16845 79681dccb9c2a32acba10395f31592bc 215 Gene3D G3DSA:1.10.1670.10 16 205 8.9E-82 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 N288_16845 79681dccb9c2a32acba10395f31592bc 215 TIGRFAM TIGR01083 nth: endonuclease III 5 196 1.3E-86 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 N288_16845 79681dccb9c2a32acba10395f31592bc 215 SUPERFAMILY SSF48150 1 210 3.77E-74 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 N288_16845 79681dccb9c2a32acba10395f31592bc 215 PIRSF PIRSF001435 1 214 4.9E-58 T 12-10-2018 N288_16845 79681dccb9c2a32acba10395f31592bc 215 Hamap MF_00942 Endonuclease III [nth]. 1 211 38.528 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 N288_16845 79681dccb9c2a32acba10395f31592bc 215 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 170 1.2E-24 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 N288_16845 79681dccb9c2a32acba10395f31592bc 215 Gene3D G3DSA:1.10.340.30 22 133 8.9E-82 T 12-10-2018 N288_16845 79681dccb9c2a32acba10395f31592bc 215 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 189 205 1.8E-6 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 N288_16845 79681dccb9c2a32acba10395f31592bc 215 SMART SM00525 188 208 1.3E-4 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 N288_16845 79681dccb9c2a32acba10395f31592bc 215 SMART SM00478 39 187 4.0E-69 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 SUPERFAMILY SSF53335 276 471 4.29E-47 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 Gene3D G3DSA:3.40.50.150 275 474 4.0E-64 T 12-10-2018 N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 Gene3D G3DSA:3.30.450.20 836 962 3.2E-17 T 12-10-2018 N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 SUPERFAMILY SSF55874 1020 1173 5.89E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 Gene3D G3DSA:3.30.565.10 1029 1175 5.1E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 Gene3D G3DSA:3.30.450.20 705 826 1.9E-9 T 12-10-2018 N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 840 956 1.2E-8 T 12-10-2018 IPR000014 PAS domain N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 PRINTS PR00996 Glutamate methyltransferase family signature 310 330 5.3E-24 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 PRINTS PR00996 Glutamate methyltransferase family signature 412 426 5.3E-24 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 PRINTS PR00996 Glutamate methyltransferase family signature 230 243 5.3E-24 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 PRINTS PR00996 Glutamate methyltransferase family signature 431 454 5.3E-24 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 PRINTS PR00996 Glutamate methyltransferase family signature 269 281 5.3E-24 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 PRINTS PR00996 Glutamate methyltransferase family signature 346 362 5.3E-24 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 Pfam PF01339 CheB methylesterase 20 193 7.5E-48 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 SMART SM00138 208 472 4.9E-76 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 SUPERFAMILY SSF55785 842 947 2.79E-13 T 12-10-2018 IPR035965 PAS domain superfamily N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 Pfam PF08448 PAS fold 842 948 2.0E-9 T 12-10-2018 IPR013656 PAS fold-4 N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 SUPERFAMILY SSF55785 733 836 5.41E-5 T 12-10-2018 IPR035965 PAS domain superfamily N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 Pfam PF03705 CheR methyltransferase, all-alpha domain 211 262 1.9E-14 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 Pfam PF00512 His Kinase A (phospho-acceptor) domain 965 1024 1.3E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 Pfam PF01739 CheR methyltransferase, SAM binding domain 277 469 5.5E-54 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 SMART SM00387 1069 1175 3.7E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 Pfam PF13596 PAS domain 721 826 1.6E-24 T 12-10-2018 N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 Gene3D G3DSA:1.10.287.130 967 1024 1.8E-14 T 12-10-2018 N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 SUPERFAMILY SSF52738 15 199 2.48E-47 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1069 1172 1.6E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 SUPERFAMILY SSF47384 954 1025 2.16E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 Gene3D G3DSA:3.40.50.180 10 202 1.7E-55 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 SUPERFAMILY SSF47757 205 278 5.36E-11 T 12-10-2018 N288_08135 a17f1ff43ea54e59f9ea9b377162f32f 1175 SMART SM00388 964 1027 6.0E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_04140 a3e417dbab96146dc79ae72b2edf6170 200 SUPERFAMILY SSF52172 3 134 2.13E-35 T 12-10-2018 IPR011006 CheY-like superfamily N288_04140 a3e417dbab96146dc79ae72b2edf6170 200 Pfam PF00072 Response regulator receiver domain 7 115 2.3E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_04140 a3e417dbab96146dc79ae72b2edf6170 200 SUPERFAMILY SSF46894 131 184 3.12E-8 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_04140 a3e417dbab96146dc79ae72b2edf6170 200 SMART SM00448 5 115 2.8E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_04140 a3e417dbab96146dc79ae72b2edf6170 200 Gene3D G3DSA:1.10.10.10 131 197 4.6E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_04140 a3e417dbab96146dc79ae72b2edf6170 200 Gene3D G3DSA:3.40.50.2300 1 130 2.2E-32 T 12-10-2018 N288_11575 556ef5f490899562614d65dd388ecae4 383 SUPERFAMILY SSF56645 7 245 4.06E-83 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 N288_11575 556ef5f490899562614d65dd388ecae4 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 126 138 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 N288_11575 556ef5f490899562614d65dd388ecae4 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 381 5.8E-43 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 N288_11575 556ef5f490899562614d65dd388ecae4 383 SUPERFAMILY SSF47203 231 380 1.1E-46 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 N288_11575 556ef5f490899562614d65dd388ecae4 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 120 1.6E-30 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 N288_11575 556ef5f490899562614d65dd388ecae4 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 340 359 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 N288_11575 556ef5f490899562614d65dd388ecae4 383 Gene3D G3DSA:1.20.140.10 239 382 1.6E-44 T 12-10-2018 N288_11575 556ef5f490899562614d65dd388ecae4 383 Gene3D G3DSA:1.10.540.10 6 122 2.2E-33 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 N288_11575 556ef5f490899562614d65dd388ecae4 383 Gene3D G3DSA:2.40.110.10 123 238 1.3E-45 T 12-10-2018 N288_11575 556ef5f490899562614d65dd388ecae4 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 221 6.0E-26 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 N288_09655 bde71d4d30aab9b36aec23707347faa0 435 Gene3D G3DSA:3.50.50.60 4 178 2.9E-59 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_09655 bde71d4d30aab9b36aec23707347faa0 435 Gene3D G3DSA:3.50.50.60 291 435 6.4E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_09655 bde71d4d30aab9b36aec23707347faa0 435 SUPERFAMILY SSF51905 8 366 3.04E-30 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_09655 bde71d4d30aab9b36aec23707347faa0 435 Pfam PF01134 Glucose inhibited division protein A 6 368 1.4E-117 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 N288_09655 bde71d4d30aab9b36aec23707347faa0 435 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 337 360 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 N288_09655 bde71d4d30aab9b36aec23707347faa0 435 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 6 434 37.433 T 12-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 N288_09655 bde71d4d30aab9b36aec23707347faa0 435 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 5 434 7.1E-242 T 12-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 N288_12655 42191231f56fe4ca5dfe8656fe377d41 447 Gene3D G3DSA:3.40.50.200 142 445 4.7E-99 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 N288_12655 42191231f56fe4ca5dfe8656fe377d41 447 PRINTS PR00723 Subtilisin serine protease family (S8) signature 190 209 5.5E-21 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_12655 42191231f56fe4ca5dfe8656fe377d41 447 PRINTS PR00723 Subtilisin serine protease family (S8) signature 228 241 5.5E-21 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_12655 42191231f56fe4ca5dfe8656fe377d41 447 PRINTS PR00723 Subtilisin serine protease family (S8) signature 383 399 5.5E-21 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_12655 42191231f56fe4ca5dfe8656fe377d41 447 SUPERFAMILY SSF52743 170 445 1.57E-96 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 N288_12655 42191231f56fe4ca5dfe8656fe377d41 447 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 384 394 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site N288_12655 42191231f56fe4ca5dfe8656fe377d41 447 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 195 206 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site N288_12655 42191231f56fe4ca5dfe8656fe377d41 447 Pfam PF00082 Subtilase family 191 434 6.8E-51 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 N288_12655 42191231f56fe4ca5dfe8656fe377d41 447 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 232 242 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site N288_22410 4efc9f7da9c85eaf63f845153e1befac 415 Pfam PF01546 Peptidase family M20/M25/M40 76 410 6.1E-32 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_22410 4efc9f7da9c85eaf63f845153e1befac 415 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 9 407 2.7E-107 T 12-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 N288_22410 4efc9f7da9c85eaf63f845153e1befac 415 PIRSF PIRSF001235 1 415 8.1E-135 T 12-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 N288_22410 4efc9f7da9c85eaf63f845153e1befac 415 SUPERFAMILY SSF53187 17 411 1.57E-74 T 12-10-2018 N288_22410 4efc9f7da9c85eaf63f845153e1befac 415 Gene3D G3DSA:3.30.70.360 213 331 8.6E-129 T 12-10-2018 N288_22410 4efc9f7da9c85eaf63f845153e1befac 415 Gene3D G3DSA:3.40.630.10 23 406 8.6E-129 T 12-10-2018 N288_22410 4efc9f7da9c85eaf63f845153e1befac 415 Pfam PF07687 Peptidase dimerisation domain 216 316 2.8E-5 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain N288_22410 4efc9f7da9c85eaf63f845153e1befac 415 SUPERFAMILY SSF55031 216 328 5.76E-25 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_18635 0ed52c61b07e63f8f0c06fda964af6a9 240 PRINTS PR00046 Major sigma-70 factor signature 78 91 2.3E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_18635 0ed52c61b07e63f8f0c06fda964af6a9 240 PRINTS PR00046 Major sigma-70 factor signature 212 223 2.3E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_18635 0ed52c61b07e63f8f0c06fda964af6a9 240 PRINTS PR00046 Major sigma-70 factor signature 176 188 2.3E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_18635 0ed52c61b07e63f8f0c06fda964af6a9 240 PRINTS PR00046 Major sigma-70 factor signature 197 212 2.3E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_18635 0ed52c61b07e63f8f0c06fda964af6a9 240 Gene3D G3DSA:1.20.120.1810 19 125 6.3E-24 T 12-10-2018 N288_18635 0ed52c61b07e63f8f0c06fda964af6a9 240 SUPERFAMILY SSF88946 11 120 1.57E-33 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_18635 0ed52c61b07e63f8f0c06fda964af6a9 240 Gene3D G3DSA:1.10.10.10 166 234 3.0E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_18635 0ed52c61b07e63f8f0c06fda964af6a9 240 Pfam PF04545 Sigma-70, region 4 173 223 1.3E-15 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 N288_18635 0ed52c61b07e63f8f0c06fda964af6a9 240 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_18635 0ed52c61b07e63f8f0c06fda964af6a9 240 TIGRFAM TIGR02846 spore_sigmaK: RNA polymerase sigma-K factor 4 228 1.4E-113 T 12-10-2018 IPR014209 RNA polymerase sigma-K type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_18635 0ed52c61b07e63f8f0c06fda964af6a9 240 SUPERFAMILY SSF88659 139 225 1.88E-18 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_18635 0ed52c61b07e63f8f0c06fda964af6a9 240 PIRSF PIRSF000770 1 240 2.9E-91 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_18635 0ed52c61b07e63f8f0c06fda964af6a9 240 Pfam PF04542 Sigma-70 region 2 54 123 1.1E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_18635 0ed52c61b07e63f8f0c06fda964af6a9 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 223 1.7E-30 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_18635 0ed52c61b07e63f8f0c06fda964af6a9 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 197 223 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_22800 14ec107486465cd0a7eadd1bbc778094 436 Pfam PF08378 Nuclease-related domain 62 178 5.3E-19 T 12-10-2018 IPR011528 Nuclease-related domain, NERD N288_22800 14ec107486465cd0a7eadd1bbc778094 436 SMART SM00341 363 436 1.0E-5 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 N288_22800 14ec107486465cd0a7eadd1bbc778094 436 SMART SM00341 271 351 2.5E-6 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 N288_22800 14ec107486465cd0a7eadd1bbc778094 436 SUPERFAMILY SSF47819 361 435 1.09E-15 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 N288_22800 14ec107486465cd0a7eadd1bbc778094 436 Gene3D G3DSA:1.10.150.80 365 435 8.3E-18 T 12-10-2018 N288_22800 14ec107486465cd0a7eadd1bbc778094 436 Pfam PF00570 HRDC domain 369 433 2.1E-16 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 N288_22800 14ec107486465cd0a7eadd1bbc778094 436 Pfam PF00570 HRDC domain 279 341 5.4E-17 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 N288_22800 14ec107486465cd0a7eadd1bbc778094 436 Gene3D G3DSA:1.10.150.80 267 350 1.7E-18 T 12-10-2018 N288_22800 14ec107486465cd0a7eadd1bbc778094 436 SUPERFAMILY SSF47819 267 344 3.05E-16 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 N288_11940 b5194ecfc5e54bb305ebf99d0430c482 451 SUPERFAMILY SSF53383 20 448 1.05E-123 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_11940 b5194ecfc5e54bb305ebf99d0430c482 451 Pfam PF00202 Aminotransferase class-III 29 447 1.9E-108 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_11940 b5194ecfc5e54bb305ebf99d0430c482 451 PIRSF PIRSF000521 13 450 7.2E-35 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_11940 b5194ecfc5e54bb305ebf99d0430c482 451 Gene3D G3DSA:3.90.1150.10 15 447 2.1E-147 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_11940 b5194ecfc5e54bb305ebf99d0430c482 451 Gene3D G3DSA:3.40.640.10 66 339 2.1E-147 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_11940 b5194ecfc5e54bb305ebf99d0430c482 451 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 250 287 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_05565 88669d16503b9470550b782c2a66e491 63 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 37 51 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 N288_05565 88669d16503b9470550b782c2a66e491 63 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 19 28 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 N288_05565 88669d16503b9470550b782c2a66e491 63 Gene3D G3DSA:1.10.8.910 4 63 3.7E-28 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily N288_05565 88669d16503b9470550b782c2a66e491 63 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 4 58 3.6E-20 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 N288_12445 8412bc093ffa80cddd4e865cb3164597 422 SUPERFAMILY SSF51230 2 93 3.93E-26 T 12-10-2018 IPR011053 Single hybrid motif N288_12445 8412bc093ffa80cddd4e865cb3164597 422 Gene3D G3DSA:2.40.50.100 1 100 1.3E-26 T 12-10-2018 N288_12445 8412bc093ffa80cddd4e865cb3164597 422 SUPERFAMILY SSF47005 120 163 1.44E-8 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 N288_12445 8412bc093ffa80cddd4e865cb3164597 422 Pfam PF02817 e3 binding domain 127 160 6.7E-12 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 N288_12445 8412bc093ffa80cddd4e865cb3164597 422 Pfam PF00364 Biotin-requiring enzyme 3 74 1.2E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment N288_12445 8412bc093ffa80cddd4e865cb3164597 422 Gene3D G3DSA:3.30.559.10 190 422 1.3E-88 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 N288_12445 8412bc093ffa80cddd4e865cb3164597 422 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 421 3.9E-174 T 12-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 N288_12445 8412bc093ffa80cddd4e865cb3164597 422 SUPERFAMILY SSF52777 191 420 3.38E-85 T 12-10-2018 N288_12445 8412bc093ffa80cddd4e865cb3164597 422 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 191 419 3.7E-78 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 N288_12445 8412bc093ffa80cddd4e865cb3164597 422 Gene3D G3DSA:4.10.320.10 127 165 3.3E-13 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 N288_12445 8412bc093ffa80cddd4e865cb3164597 422 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 N288_22215 1fd5b3ec8fb6a8ea83617769c8cdf4db 308 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 85 226 6.4E-50 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain N288_22215 1fd5b3ec8fb6a8ea83617769c8cdf4db 308 Hamap MF_01140 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU [tagU]. 9 308 48.968 T 12-10-2018 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU N288_22215 1fd5b3ec8fb6a8ea83617769c8cdf4db 308 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 84 227 3.0E-49 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain N288_22215 1fd5b3ec8fb6a8ea83617769c8cdf4db 308 Gene3D G3DSA:1.10.260.150 49 308 1.9E-92 T 12-10-2018 N288_04660 2cf07efa22620e09ca78293e61607602 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_04660 2cf07efa22620e09ca78293e61607602 255 Gene3D G3DSA:3.40.50.720 1 239 6.9E-45 T 12-10-2018 N288_04660 2cf07efa22620e09ca78293e61607602 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.6E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_04660 2cf07efa22620e09ca78293e61607602 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 3.6E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_04660 2cf07efa22620e09ca78293e61607602 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.6E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_04660 2cf07efa22620e09ca78293e61607602 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 3.6E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_04660 2cf07efa22620e09ca78293e61607602 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 3.6E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_04660 2cf07efa22620e09ca78293e61607602 255 Pfam PF00106 short chain dehydrogenase 3 195 7.9E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_04660 2cf07efa22620e09ca78293e61607602 255 SUPERFAMILY SSF51735 2 226 1.98E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_04660 2cf07efa22620e09ca78293e61607602 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 4.0E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_04660 2cf07efa22620e09ca78293e61607602 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 4.0E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_04660 2cf07efa22620e09ca78293e61607602 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 4.0E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_11715 10388053dfa5a1abaef84ebd66162f21 78 Hamap MF_01506 Small, acid-soluble spore protein Tlp [tlp]. 1 78 26.422 T 12-10-2018 IPR017524 Small acid-soluble spore protein, thioredoxin-like N288_11715 10388053dfa5a1abaef84ebd66162f21 78 TIGRFAM TIGR03090 SASP_tlp: small, acid-soluble spore protein tlp 6 72 3.1E-29 T 12-10-2018 IPR017524 Small acid-soluble spore protein, thioredoxin-like N288_08055 084283c574ef88595ee805e4843e0323 361 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 8 361 9.6E-66 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 N288_08055 084283c574ef88595ee805e4843e0323 361 Gene3D G3DSA:3.30.300.210 216 361 2.2E-21 T 12-10-2018 IPR038501 Spore germination GerAC superfamily N288_08055 084283c574ef88595ee805e4843e0323 361 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 204 358 1.0E-25 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 N288_07865 42bd1fb365082918faa8e3ad10a70437 84 Pfam PF14069 Stage VI sporulation protein F 6 77 1.3E-28 T 12-10-2018 IPR025942 Stage VI sporulation protein F N288_01390 6eb28c45a8201d78c16e3cc0d15262a5 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 294 6.0E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_01390 6eb28c45a8201d78c16e3cc0d15262a5 298 SUPERFAMILY SSF161098 59 287 1.7E-59 T 12-10-2018 IPR035906 MetI-like superfamily N288_01390 6eb28c45a8201d78c16e3cc0d15262a5 298 Gene3D G3DSA:1.10.3720.10 55 297 1.4E-70 T 12-10-2018 IPR035906 MetI-like superfamily N288_25195 995aabd969b6ada737b1b4e52113d8c6 140 Pfam PF00293 NUDIX domain 4 117 3.9E-22 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_25195 995aabd969b6ada737b1b4e52113d8c6 140 Gene3D G3DSA:3.90.79.10 2 133 1.4E-31 T 12-10-2018 N288_25195 995aabd969b6ada737b1b4e52113d8c6 140 PRINTS PR00502 NUDIX hydrolase family signature 30 44 8.1E-9 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_25195 995aabd969b6ada737b1b4e52113d8c6 140 PRINTS PR00502 NUDIX hydrolase family signature 44 59 8.1E-9 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_25195 995aabd969b6ada737b1b4e52113d8c6 140 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_25195 995aabd969b6ada737b1b4e52113d8c6 140 SUPERFAMILY SSF55811 1 121 7.18E-30 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_03650 e2f8e3d21aa5c9183e11c4427d93ed46 115 Gene3D G3DSA:1.10.260.40 1 110 3.1E-27 T 12-10-2018 N288_03650 e2f8e3d21aa5c9183e11c4427d93ed46 115 Pfam PF08671 Anti-repressor SinI 75 102 1.8E-12 T 12-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 N288_03650 e2f8e3d21aa5c9183e11c4427d93ed46 115 SUPERFAMILY SSF47413 2 64 9.65E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_03650 e2f8e3d21aa5c9183e11c4427d93ed46 115 SMART SM00530 5 61 7.3E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_03650 e2f8e3d21aa5c9183e11c4427d93ed46 115 SUPERFAMILY SSF47406 75 108 7.06E-12 T 12-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 N288_03650 e2f8e3d21aa5c9183e11c4427d93ed46 115 Pfam PF01381 Helix-turn-helix 6 61 4.1E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_23000 c61e50f9924134c62fda49d875cc3604 340 SUPERFAMILY SSF53474 16 332 3.94E-33 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_23000 c61e50f9924134c62fda49d875cc3604 340 Gene3D G3DSA:3.40.50.1820 10 333 2.4E-76 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_23000 c61e50f9924134c62fda49d875cc3604 340 Pfam PF05448 Acetyl xylan esterase (AXE1) 16 328 6.6E-97 T 12-10-2018 IPR008391 Acetyl xylan esterase N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 771 851 2.7E-25 T 12-10-2018 IPR019489 Clp ATPase, C-terminal N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 297 309 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 SUPERFAMILY SSF81923 4 158 9.22E-34 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 SUPERFAMILY SSF52540 551 856 8.24E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 Pfam PF07724 AAA domain (Cdc48 subfamily) 601 764 3.1E-56 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 SMART SM01086 771 860 4.8E-33 T 12-10-2018 IPR019489 Clp ATPase, C-terminal N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 97 148 3.5E-6 T 12-10-2018 IPR004176 Clp, N-terminal N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 9.3E-9 T 12-10-2018 IPR004176 Clp, N-terminal N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 636 654 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 680 698 8.4E-43 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 606 624 8.4E-43 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 651 669 8.4E-43 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 713 727 8.4E-43 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 Gene3D G3DSA:3.40.50.300 346 549 2.0E-70 T 12-10-2018 N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 Gene3D G3DSA:3.40.50.300 152 345 2.0E-73 T 12-10-2018 N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 SMART SM00382 201 347 1.5E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 SMART SM00382 602 753 3.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 860 0.0 T 12-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 SUPERFAMILY SSF52540 160 550 1.04E-98 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 206 339 5.7E-14 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 Gene3D G3DSA:1.10.8.60 771 865 1.3E-26 T 12-10-2018 N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 Gene3D G3DSA:1.10.1780.10 1 151 1.9E-27 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 N288_07520 3143579494ea6a9dfa52675f858fd3ee 866 Gene3D G3DSA:3.40.50.300 555 769 3.4E-89 T 12-10-2018 N288_16195 2e1557dc5a9fc9e4ec95330c5534b824 288 Gene3D G3DSA:3.40.630.30 84 262 3.9E-12 T 12-10-2018 N288_16195 2e1557dc5a9fc9e4ec95330c5534b824 288 TIGRFAM TIGR03827 GNAT_ablB: putative beta-lysine N-acetyltransferase 17 280 3.5E-89 T 12-10-2018 IPR022525 Beta-lysine N-acetyltransferase GO:0016407 N288_16195 2e1557dc5a9fc9e4ec95330c5534b824 288 Pfam PF00583 Acetyltransferase (GNAT) family 143 231 7.0E-7 T 12-10-2018 IPR000182 GNAT domain N288_16195 2e1557dc5a9fc9e4ec95330c5534b824 288 SUPERFAMILY SSF55729 132 280 3.49E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_20100 cf5bd197ecd3ba7a2b755b707927ba6b 239 Gene3D G3DSA:3.30.70.580 62 230 3.3E-57 T 12-10-2018 N288_20100 cf5bd197ecd3ba7a2b755b707927ba6b 239 Gene3D G3DSA:3.10.290.10 1 57 1.4E-18 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 N288_20100 cf5bd197ecd3ba7a2b755b707927ba6b 239 SUPERFAMILY SSF55120 62 230 6.56E-44 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_20100 cf5bd197ecd3ba7a2b755b707927ba6b 239 Pfam PF00849 RNA pseudouridylate synthase 62 195 1.1E-20 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_20100 cf5bd197ecd3ba7a2b755b707927ba6b 239 SMART SM00363 1 59 5.6E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_20100 cf5bd197ecd3ba7a2b755b707927ba6b 239 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 227 2.4E-46 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 N288_20100 cf5bd197ecd3ba7a2b755b707927ba6b 239 Pfam PF01479 S4 domain 1 44 2.1E-12 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_20100 cf5bd197ecd3ba7a2b755b707927ba6b 239 Gene3D G3DSA:3.30.70.1560 129 212 3.3E-57 T 12-10-2018 N288_20100 cf5bd197ecd3ba7a2b755b707927ba6b 239 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 N288_20100 cf5bd197ecd3ba7a2b755b707927ba6b 239 SUPERFAMILY SSF55174 1 59 6.48E-14 T 12-10-2018 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 519 653 3.6E-47 T 12-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 SUPERFAMILY SSF47323 353 566 3.74E-46 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 17 26 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 Pfam PF01588 Putative tRNA binding domain 559 650 1.7E-27 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 Gene3D G3DSA:2.40.50.140 544 653 1.2E-37 T 12-10-2018 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 6.9E-34 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 6.9E-34 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 351 362 6.9E-34 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 259 274 6.9E-34 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 6.9E-34 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 226 237 6.9E-34 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 Gene3D G3DSA:1.10.730.10 341 511 6.0E-52 T 12-10-2018 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 Pfam PF08264 Anticodon-binding domain of tRNA 386 524 1.0E-6 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 SUPERFAMILY SSF50249 552 652 3.92E-34 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 Gene3D G3DSA:2.170.220.10 119 228 8.3E-154 T 12-10-2018 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 Gene3D G3DSA:3.40.50.620 8 336 8.3E-154 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 Pfam PF09334 tRNA synthetases class I (M) 157 363 8.0E-70 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 Pfam PF09334 tRNA synthetases class I (M) 8 152 2.0E-53 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 SUPERFAMILY SSF52374 6 350 5.07E-118 T 12-10-2018 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 158 513 1.6E-119 T 12-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 N288_00255 1efdc06e60c6ac2445f8c523de6a9245 653 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 512 52.111 T 12-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 N288_04015 5d4730f85e14fc129a954ac632a51613 81 SUPERFAMILY SSF47413 7 75 5.63E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_04015 5d4730f85e14fc129a954ac632a51613 81 Pfam PF13560 Helix-turn-helix domain 10 63 3.3E-10 T 12-10-2018 N288_04015 5d4730f85e14fc129a954ac632a51613 81 SMART SM00530 12 68 1.4E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_04015 5d4730f85e14fc129a954ac632a51613 81 Gene3D G3DSA:1.10.260.40 2 77 1.7E-14 T 12-10-2018 N288_08295 3593e5b3f0f764074a962003cf7dcbf7 247 Hamap MF_02064 RNA polymerase sigma factor SigI [sigI]. 13 243 28.111 T 12-10-2018 IPR014244 RNA polymerase sigma-I type N288_08295 3593e5b3f0f764074a962003cf7dcbf7 247 PIRSF PIRSF038953 5 246 3.5E-65 T 12-10-2018 IPR014244 RNA polymerase sigma-I type N288_08295 3593e5b3f0f764074a962003cf7dcbf7 247 SUPERFAMILY SSF88946 19 101 8.44E-18 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_08295 3593e5b3f0f764074a962003cf7dcbf7 247 TIGRFAM TIGR02895 spore_sigI: RNA polymerase sigma-I factor 18 241 4.4E-81 T 12-10-2018 IPR014244 RNA polymerase sigma-I type N288_08295 3593e5b3f0f764074a962003cf7dcbf7 247 Gene3D G3DSA:1.10.10.10 52 199 9.1E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_08295 3593e5b3f0f764074a962003cf7dcbf7 247 Pfam PF04542 Sigma-70 region 2 32 102 3.0E-11 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_08295 3593e5b3f0f764074a962003cf7dcbf7 247 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 225 6.2E-14 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_10160 90482ec50b676b5ca818699c012b7e8f 578 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 5 572 4.3E-218 T 12-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 N288_10160 90482ec50b676b5ca818699c012b7e8f 578 SUPERFAMILY SSF52518 196 458 2.42E-73 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_10160 90482ec50b676b5ca818699c012b7e8f 578 Gene3D G3DSA:3.40.50.970 186 386 5.8E-77 T 12-10-2018 N288_10160 90482ec50b676b5ca818699c012b7e8f 578 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 475 569 2.2E-12 T 12-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II N288_10160 90482ec50b676b5ca818699c012b7e8f 578 SUPERFAMILY SSF52922 472 577 4.28E-24 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 N288_10160 90482ec50b676b5ca818699c012b7e8f 578 SUPERFAMILY SSF53323 4 221 2.88E-45 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 N288_10160 90482ec50b676b5ca818699c012b7e8f 578 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 14 175 2.8E-41 T 12-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 N288_10160 90482ec50b676b5ca818699c012b7e8f 578 Gene3D G3DSA:3.40.920.10 1 185 2.9E-28 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 N288_10160 90482ec50b676b5ca818699c012b7e8f 578 Gene3D G3DSA:3.40.50.920 468 578 3.1E-30 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 N288_10160 90482ec50b676b5ca818699c012b7e8f 578 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 210 450 1.8E-62 T 12-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 N288_00840 c20bc2f0bd98104a6d9b1c27a89f0e5b 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 172 195 8.3E-101 T 12-10-2018 N288_00840 c20bc2f0bd98104a6d9b1c27a89f0e5b 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 8.3E-101 T 12-10-2018 N288_00840 c20bc2f0bd98104a6d9b1c27a89f0e5b 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 8.3E-101 T 12-10-2018 N288_00840 c20bc2f0bd98104a6d9b1c27a89f0e5b 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 8.3E-101 T 12-10-2018 N288_00840 c20bc2f0bd98104a6d9b1c27a89f0e5b 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 399 417 8.3E-101 T 12-10-2018 N288_00840 c20bc2f0bd98104a6d9b1c27a89f0e5b 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 146 171 8.3E-101 T 12-10-2018 N288_00840 c20bc2f0bd98104a6d9b1c27a89f0e5b 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 67 87 8.3E-101 T 12-10-2018 N288_00840 c20bc2f0bd98104a6d9b1c27a89f0e5b 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 8.3E-101 T 12-10-2018 N288_00840 c20bc2f0bd98104a6d9b1c27a89f0e5b 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 8.3E-101 T 12-10-2018 N288_00840 c20bc2f0bd98104a6d9b1c27a89f0e5b 431 Gene3D G3DSA:1.10.3370.10 1 426 7.3E-160 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 N288_00840 c20bc2f0bd98104a6d9b1c27a89f0e5b 431 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 430 29.113 T 12-10-2018 IPR026593 Protein translocase subunit SecY N288_00840 c20bc2f0bd98104a6d9b1c27a89f0e5b 431 PIRSF PIRSF004557 1 431 7.9E-131 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 N288_00840 c20bc2f0bd98104a6d9b1c27a89f0e5b 431 ProSitePatterns PS00755 Protein secY signature 1. 68 87 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 N288_00840 c20bc2f0bd98104a6d9b1c27a89f0e5b 431 SUPERFAMILY SSF103491 1 421 3.66E-131 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 N288_00840 c20bc2f0bd98104a6d9b1c27a89f0e5b 431 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 426 1.2E-151 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 N288_00840 c20bc2f0bd98104a6d9b1c27a89f0e5b 431 Pfam PF00344 SecY translocase 68 414 1.3E-115 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 N288_00840 c20bc2f0bd98104a6d9b1c27a89f0e5b 431 ProSitePatterns PS00756 Protein secY signature 2. 165 182 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 N288_12930 33cb4ca91dce3bfb1f32827cba418056 261 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 253 8.9E-56 T 12-10-2018 IPR000150 Cof family GO:0016787 N288_12930 33cb4ca91dce3bfb1f32827cba418056 261 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 227 6.1E-26 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 N288_12930 33cb4ca91dce3bfb1f32827cba418056 261 Gene3D G3DSA:3.40.50.1000 6 250 1.8E-58 T 12-10-2018 IPR023214 HAD superfamily N288_12930 33cb4ca91dce3bfb1f32827cba418056 261 ProSitePatterns PS01229 Hypothetical cof family signature 2. 208 230 - T 12-10-2018 N288_12930 33cb4ca91dce3bfb1f32827cba418056 261 Gene3D G3DSA:3.30.1240.10 82 183 1.8E-58 T 12-10-2018 N288_12930 33cb4ca91dce3bfb1f32827cba418056 261 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 252 9.4E-56 T 12-10-2018 N288_12930 33cb4ca91dce3bfb1f32827cba418056 261 SUPERFAMILY SSF56784 4 257 8.57E-57 T 12-10-2018 IPR036412 HAD-like superfamily N288_11330 269e025153562ec32a192117274c8325 329 Gene3D G3DSA:3.90.25.30 165 310 1.6E-116 T 12-10-2018 N288_11330 269e025153562ec32a192117274c8325 329 Gene3D G3DSA:3.40.50.720 4 307 1.6E-116 T 12-10-2018 N288_11330 269e025153562ec32a192117274c8325 329 SUPERFAMILY SSF51735 1 260 3.82E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_11330 269e025153562ec32a192117274c8325 329 Pfam PF02719 Polysaccharide biosynthesis protein 7 279 5.1E-98 T 12-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain N288_22230 cd266e0c08d886a3704afb046c883713 377 Pfam PF07687 Peptidase dimerisation domain 178 276 9.2E-20 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain N288_22230 cd266e0c08d886a3704afb046c883713 377 Pfam PF01546 Peptidase family M20/M25/M40 76 373 2.5E-28 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_22230 cd266e0c08d886a3704afb046c883713 377 SUPERFAMILY SSF55031 180 292 2.22E-23 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_22230 cd266e0c08d886a3704afb046c883713 377 Gene3D G3DSA:3.30.70.360 180 289 1.2E-129 T 12-10-2018 N288_22230 cd266e0c08d886a3704afb046c883713 377 SUPERFAMILY SSF53187 5 375 8.38E-53 T 12-10-2018 N288_22230 cd266e0c08d886a3704afb046c883713 377 PIRSF PIRSF037238 2 376 2.2E-136 T 12-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase N288_22230 cd266e0c08d886a3704afb046c883713 377 Gene3D G3DSA:3.40.630.10 15 364 1.2E-129 T 12-10-2018 N288_09245 777f9731e18832306ae495983658970a 312 PIRSF PIRSF018571 1 301 3.8E-81 T 12-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 N288_09245 777f9731e18832306ae495983658970a 312 Pfam PF03419 Sporulation factor SpoIIGA 3 298 1.5E-78 T 12-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 N288_09245 777f9731e18832306ae495983658970a 312 TIGRFAM TIGR02854 spore_II_GA: sigma-E processing peptidase SpoIIGA 2 299 9.3E-81 T 12-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 N288_10965 5205ff8bf9d9478d7647e9ea33b895dd 349 Pfam PF05343 M42 glutamyl aminopeptidase 50 338 3.0E-93 T 12-10-2018 IPR008007 Peptidase M42 N288_10965 5205ff8bf9d9478d7647e9ea33b895dd 349 Gene3D G3DSA:2.40.30.40 78 172 1.8E-127 T 12-10-2018 IPR023367 Peptidase M42, domain 2 N288_10965 5205ff8bf9d9478d7647e9ea33b895dd 349 Gene3D G3DSA:3.40.630.10 15 343 1.8E-127 T 12-10-2018 N288_10965 5205ff8bf9d9478d7647e9ea33b895dd 349 PIRSF PIRSF001123 6 347 2.1E-44 T 12-10-2018 IPR008007 Peptidase M42 N288_10965 5205ff8bf9d9478d7647e9ea33b895dd 349 SUPERFAMILY SSF101821 75 187 3.05E-32 T 12-10-2018 N288_10965 5205ff8bf9d9478d7647e9ea33b895dd 349 SUPERFAMILY SSF53187 8 344 1.84E-57 T 12-10-2018 N288_09485 93d51aacce45b37f972f86c21c3fc380 334 PIRSF PIRSF002465 1 331 4.5E-130 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 N288_09485 93d51aacce45b37f972f86c21c3fc380 334 SUPERFAMILY SSF53659 1 326 4.52E-105 T 12-10-2018 N288_09485 93d51aacce45b37f972f86c21c3fc380 334 Pfam PF02504 Fatty acid synthesis protein 2 319 5.3E-122 T 12-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 N288_09485 93d51aacce45b37f972f86c21c3fc380 334 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 2 327 3.9E-133 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 N288_09485 93d51aacce45b37f972f86c21c3fc380 334 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 334 152.028 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 N288_09485 93d51aacce45b37f972f86c21c3fc380 334 Gene3D G3DSA:3.40.718.10 1 331 1.6E-140 T 12-10-2018 N288_08255 8939f227a08c4d481682efac0eec2d89 525 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 519 1.3E-202 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 N288_08255 8939f227a08c4d481682efac0eec2d89 525 Gene3D G3DSA:3.40.50.300 109 272 1.9E-102 T 12-10-2018 N288_08255 8939f227a08c4d481682efac0eec2d89 525 SUPERFAMILY SSF54980 391 462 2.88E-16 T 12-10-2018 IPR035647 EF-G domain III/V-like N288_08255 8939f227a08c4d481682efac0eec2d89 525 Gene3D G3DSA:3.40.50.300 71 376 1.9E-102 T 12-10-2018 N288_08255 8939f227a08c4d481682efac0eec2d89 525 PRINTS PR00315 GTP-binding elongation factor signature 84 94 2.8E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_08255 8939f227a08c4d481682efac0eec2d89 525 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.8E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_08255 8939f227a08c4d481682efac0eec2d89 525 PRINTS PR00315 GTP-binding elongation factor signature 136 145 2.8E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_08255 8939f227a08c4d481682efac0eec2d89 525 PRINTS PR00315 GTP-binding elongation factor signature 64 72 2.8E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_08255 8939f227a08c4d481682efac0eec2d89 525 PRINTS PR00315 GTP-binding elongation factor signature 100 111 2.8E-11 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_08255 8939f227a08c4d481682efac0eec2d89 525 SUPERFAMILY SSF50447 259 386 1.67E-26 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily N288_08255 8939f227a08c4d481682efac0eec2d89 525 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 152 1.9E-20 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 N288_08255 8939f227a08c4d481682efac0eec2d89 525 Pfam PF16658 Class II release factor RF3, C-terminal domain 385 509 4.0E-43 T 12-10-2018 IPR032090 Peptide chain release factor 3, C-terminal N288_08255 8939f227a08c4d481682efac0eec2d89 525 SUPERFAMILY SSF52540 12 275 5.83E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_08255 8939f227a08c4d481682efac0eec2d89 525 Gene3D G3DSA:3.30.70.3280 388 524 9.2E-47 T 12-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily N288_08255 8939f227a08c4d481682efac0eec2d89 525 Pfam PF03144 Elongation factor Tu domain 2 311 377 4.3E-9 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 N288_08255 8939f227a08c4d481682efac0eec2d89 525 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 57 72 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site N288_08255 8939f227a08c4d481682efac0eec2d89 525 Pfam PF00009 Elongation factor Tu GTP binding domain 13 274 3.6E-49 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_08255 8939f227a08c4d481682efac0eec2d89 525 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 3 521 49.187 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 N288_17670 ff4450d2ce667d0761d6342d1f07dd55 180 Gene3D G3DSA:2.40.440.10 15 172 2.6E-38 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like N288_17670 ff4450d2ce667d0761d6342d1f07dd55 180 Pfam PF03734 L,D-transpeptidase catalytic domain 29 152 4.3E-19 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 N288_17670 ff4450d2ce667d0761d6342d1f07dd55 180 SUPERFAMILY SSF141523 27 152 5.62E-29 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like N288_18660 3a29d4686a6c5a468e276600b90a25dd 307 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 N288_18660 3a29d4686a6c5a468e276600b90a25dd 307 Gene3D G3DSA:3.40.50.1100 10 299 1.6E-116 T 12-10-2018 N288_18660 3a29d4686a6c5a468e276600b90a25dd 307 Gene3D G3DSA:3.40.50.1100 45 146 1.6E-116 T 12-10-2018 N288_18660 3a29d4686a6c5a468e276600b90a25dd 307 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 303 7.1E-104 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 N288_18660 3a29d4686a6c5a468e276600b90a25dd 307 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 292 2.1E-66 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme N288_18660 3a29d4686a6c5a468e276600b90a25dd 307 SUPERFAMILY SSF53686 2 301 5.11E-92 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme N288_16350 6b76d137d0e3929f755ec05b46406481 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.47 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 N288_16350 6b76d137d0e3929f755ec05b46406481 264 Pfam PF00303 Thymidylate synthase 2 264 7.4E-128 T 12-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 N288_16350 6b76d137d0e3929f755ec05b46406481 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 2.1E-94 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 N288_16350 6b76d137d0e3929f755ec05b46406481 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 2.5E-42 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 N288_16350 6b76d137d0e3929f755ec05b46406481 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 3.7E-50 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 N288_16350 6b76d137d0e3929f755ec05b46406481 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 3.7E-50 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 N288_16350 6b76d137d0e3929f755ec05b46406481 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 3.7E-50 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 N288_16350 6b76d137d0e3929f755ec05b46406481 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 3.7E-50 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 N288_16350 6b76d137d0e3929f755ec05b46406481 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 3.7E-50 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 N288_16350 6b76d137d0e3929f755ec05b46406481 264 SUPERFAMILY SSF55831 1 264 6.67E-130 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 N288_16350 6b76d137d0e3929f755ec05b46406481 264 Gene3D G3DSA:3.30.572.10 1 264 2.0E-132 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 N288_16350 6b76d137d0e3929f755ec05b46406481 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 12-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 N288_20675 230e930f530df0e2838ee31c383c0067 396 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_20675 230e930f530df0e2838ee31c383c0067 396 PIRSF PIRSF000521 1 160 8.0E-8 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_20675 230e930f530df0e2838ee31c383c0067 396 PIRSF PIRSF000521 174 396 2.9E-32 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_20675 230e930f530df0e2838ee31c383c0067 396 Pfam PF00202 Aminotransferase class-III 16 395 8.9E-133 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_20675 230e930f530df0e2838ee31c383c0067 396 Hamap MF_01689 Ornithine aminotransferase [rocD]. 4 396 65.463 T 12-10-2018 IPR034757 Ornithine aminotransferase, bacterial type GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922 N288_20675 230e930f530df0e2838ee31c383c0067 396 Gene3D G3DSA:3.40.640.10 58 306 3.3E-149 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_20675 230e930f530df0e2838ee31c383c0067 396 Gene3D G3DSA:3.90.1150.10 23 385 3.3E-149 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_20675 230e930f530df0e2838ee31c383c0067 396 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 4 395 4.0E-166 T 12-10-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 N288_20675 230e930f530df0e2838ee31c383c0067 396 SUPERFAMILY SSF53383 2 395 3.13E-122 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_09880 5559d0cb97eddaf017a46a26928a184a 258 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 29 256 5.4E-85 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 N288_09880 5559d0cb97eddaf017a46a26928a184a 258 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 29 257 40.74 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 N288_09880 5559d0cb97eddaf017a46a26928a184a 258 Gene3D G3DSA:3.40.1180.10 14 258 2.8E-98 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 N288_09880 5559d0cb97eddaf017a46a26928a184a 258 SUPERFAMILY SSF64005 25 251 3.27E-87 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 N288_09880 5559d0cb97eddaf017a46a26928a184a 258 Pfam PF01255 Putative undecaprenyl diphosphate synthase 36 256 3.0E-82 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 N288_09880 5559d0cb97eddaf017a46a26928a184a 258 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 202 219 - T 12-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 N288_15595 5843985d14a03c1e2c7f6e2ec352d949 262 Gene3D G3DSA:3.40.50.300 1 260 7.2E-66 T 12-10-2018 N288_15595 5843985d14a03c1e2c7f6e2ec352d949 262 SMART SM00382 32 211 8.8E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_15595 5843985d14a03c1e2c7f6e2ec352d949 262 SUPERFAMILY SSF52540 3 241 9.0E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_15595 5843985d14a03c1e2c7f6e2ec352d949 262 Pfam PF00005 ABC transporter 23 161 1.2E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_15595 5843985d14a03c1e2c7f6e2ec352d949 262 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_08790 995f9faebc2c062b73da6adff443b577 325 SUPERFAMILY SSF52922 188 324 4.06E-41 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 N288_08790 995f9faebc2c062b73da6adff443b577 325 Pfam PF02780 Transketolase, C-terminal domain 194 310 4.7E-39 T 12-10-2018 IPR033248 Transketolase, C-terminal domain N288_08790 995f9faebc2c062b73da6adff443b577 325 Gene3D G3DSA:3.40.50.970 1 192 2.2E-83 T 12-10-2018 N288_08790 995f9faebc2c062b73da6adff443b577 325 SMART SM00861 4 179 9.6E-68 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain N288_08790 995f9faebc2c062b73da6adff443b577 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 6.8E-42 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain N288_08790 995f9faebc2c062b73da6adff443b577 325 SUPERFAMILY SSF52518 3 193 7.07E-69 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_08790 995f9faebc2c062b73da6adff443b577 325 Gene3D G3DSA:3.40.50.920 193 325 1.5E-47 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 N288_20715 9d5ea6ffd2112812abd53172b663f284 86 Gene3D G3DSA:1.10.340.20 1 86 2.7E-34 T 12-10-2018 IPR023162 Apc36109-like domain superfamily N288_20715 9d5ea6ffd2112812abd53172b663f284 86 Pfam PF08958 Domain of unknown function (DUF1871) 9 85 1.4E-37 T 12-10-2018 IPR015053 Protein of unknown function DUF1871 N288_20715 9d5ea6ffd2112812abd53172b663f284 86 ProDom PD062625 YUGE 10 85 1.0E-16 T 12-10-2018 IPR015053 Protein of unknown function DUF1871 N288_20715 9d5ea6ffd2112812abd53172b663f284 86 SUPERFAMILY SSF116922 5 82 1.44E-28 T 12-10-2018 IPR023162 Apc36109-like domain superfamily N288_12710 69ced0aa7c82fc7ff7ce3d1429733fda 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 42 2.5E-13 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_12710 69ced0aa7c82fc7ff7ce3d1429733fda 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 2.5E-13 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_12710 69ced0aa7c82fc7ff7ce3d1429733fda 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 74 89 2.5E-13 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_12710 69ced0aa7c82fc7ff7ce3d1429733fda 108 Gene3D G3DSA:1.10.10.10 2 108 1.4E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_12710 69ced0aa7c82fc7ff7ce3d1429733fda 108 Pfam PF01022 Bacterial regulatory protein, arsR family 32 77 4.1E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_12710 69ced0aa7c82fc7ff7ce3d1429733fda 108 SUPERFAMILY SSF46785 9 104 4.77E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_12710 69ced0aa7c82fc7ff7ce3d1429733fda 108 SMART SM00418 25 103 1.2E-32 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_17480 ab9138e1f7b9a2c7f562b3c909faec84 214 PIRSF PIRSF038973 1 213 2.0E-76 T 12-10-2018 IPR014196 Stage II sporulation protein M N288_17480 ab9138e1f7b9a2c7f562b3c909faec84 214 Pfam PF01944 Stage II sporulation protein M 25 202 4.7E-27 T 12-10-2018 IPR002798 Stage II sporulation protein M-like N288_17480 ab9138e1f7b9a2c7f562b3c909faec84 214 TIGRFAM TIGR02831 spo_II_M: stage II sporulation protein M 11 206 4.2E-74 T 12-10-2018 IPR014196 Stage II sporulation protein M N288_20115 2428725f77a52f5d3a8dbbd051d3096b 419 Gene3D G3DSA:1.10.8.260 277 341 1.0E-120 T 12-10-2018 IPR023166 HI0933-like insert domain superfamily N288_20115 2428725f77a52f5d3a8dbbd051d3096b 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 3.7E-8 T 12-10-2018 N288_20115 2428725f77a52f5d3a8dbbd051d3096b 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.7E-8 T 12-10-2018 N288_20115 2428725f77a52f5d3a8dbbd051d3096b 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 366 388 3.7E-8 T 12-10-2018 N288_20115 2428725f77a52f5d3a8dbbd051d3096b 419 SUPERFAMILY SSF160996 191 359 2.09E-44 T 12-10-2018 N288_20115 2428725f77a52f5d3a8dbbd051d3096b 419 Gene3D G3DSA:2.40.30.10 190 358 1.0E-120 T 12-10-2018 N288_20115 2428725f77a52f5d3a8dbbd051d3096b 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.2E-8 T 12-10-2018 N288_20115 2428725f77a52f5d3a8dbbd051d3096b 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 157 166 1.2E-8 T 12-10-2018 N288_20115 2428725f77a52f5d3a8dbbd051d3096b 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 1.2E-8 T 12-10-2018 N288_20115 2428725f77a52f5d3a8dbbd051d3096b 419 SUPERFAMILY SSF51905 1 415 1.3E-59 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_20115 2428725f77a52f5d3a8dbbd051d3096b 419 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 4 410 3.5E-142 T 12-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like N288_20115 2428725f77a52f5d3a8dbbd051d3096b 419 Gene3D G3DSA:3.50.50.60 5 407 1.0E-120 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_20115 2428725f77a52f5d3a8dbbd051d3096b 419 Pfam PF03486 HI0933-like protein 2 411 3.1E-149 T 12-10-2018 N288_05295 f952ac4270db74dd3bc62de650a1cda4 141 SUPERFAMILY SSF54427 2 117 7.52E-5 T 12-10-2018 IPR032710 NTF2-like domain superfamily N288_10315 a1a70643168bbe40ab1b0b39028a0add 177 Gene3D G3DSA:1.10.260.40 3 84 2.1E-15 T 12-10-2018 N288_10315 a1a70643168bbe40ab1b0b39028a0add 177 Pfam PF01381 Helix-turn-helix 8 59 4.0E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_10315 a1a70643168bbe40ab1b0b39028a0add 177 SMART SM00530 5 60 3.1E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_10315 a1a70643168bbe40ab1b0b39028a0add 177 SUPERFAMILY SSF47413 4 63 2.49E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_10590 3008677d805a7b28ab304371f479b560 499 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 7 492 7.9E-241 T 12-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 N288_10590 3008677d805a7b28ab304371f479b560 499 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 4 492 54.54 T 12-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 N288_10590 3008677d805a7b28ab304371f479b560 499 SUPERFAMILY SSF51905 7 325 3.89E-22 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_10590 3008677d805a7b28ab304371f479b560 499 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 8 490 3.6E-218 T 12-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 N288_11090 a709102642dc427988b7b74fd1e7a96d 219 Pfam PF01842 ACT domain 148 209 2.6E-10 T 12-10-2018 IPR002912 ACT domain N288_11090 a709102642dc427988b7b74fd1e7a96d 219 Gene3D G3DSA:3.30.1330.90 13 89 3.0E-18 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 N288_11090 a709102642dc427988b7b74fd1e7a96d 219 SUPERFAMILY SSF143548 19 136 1.57E-31 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 N288_11090 a709102642dc427988b7b74fd1e7a96d 219 SUPERFAMILY SSF55021 145 215 8.46E-15 T 12-10-2018 N288_11090 a709102642dc427988b7b74fd1e7a96d 219 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 202 1.7E-87 T 12-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 N288_11090 a709102642dc427988b7b74fd1e7a96d 219 Gene3D G3DSA:3.30.70.260 138 216 2.6E-15 T 12-10-2018 N288_11090 a709102642dc427988b7b74fd1e7a96d 219 PIRSF PIRSF036692 1 219 5.2E-98 T 12-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 N288_11090 a709102642dc427988b7b74fd1e7a96d 219 Pfam PF03315 Serine dehydratase beta chain 5 72 1.9E-11 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 N288_02930 104d46613d9a5bd51fd010499977e41d 189 Gene3D G3DSA:2.30.30.1210 43 189 3.0E-67 T 12-10-2018 N288_02930 104d46613d9a5bd51fd010499977e41d 189 Pfam PF07563 Protein of unknown function (DUF1541) 68 119 1.3E-26 T 12-10-2018 IPR011438 Domain of unknown function DUF1541 N288_02930 104d46613d9a5bd51fd010499977e41d 189 Pfam PF07563 Protein of unknown function (DUF1541) 133 182 1.5E-26 T 12-10-2018 IPR011438 Domain of unknown function DUF1541 N288_09865 ec83aeb787bec6cb8c5c132372fe7056 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 1.4E-102 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 N288_09865 ec83aeb787bec6cb8c5c132372fe7056 241 Pfam PF00696 Amino acid kinase family 7 217 1.4E-27 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 N288_09865 ec83aeb787bec6cb8c5c132372fe7056 241 SUPERFAMILY SSF53633 4 238 8.9E-74 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily N288_09865 ec83aeb787bec6cb8c5c132372fe7056 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 238 44.798 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 N288_09865 ec83aeb787bec6cb8c5c132372fe7056 241 Gene3D G3DSA:3.40.1160.10 1 241 2.6E-82 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily N288_09865 ec83aeb787bec6cb8c5c132372fe7056 241 PIRSF PIRSF005650 1 241 3.9E-98 T 12-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 N288_17745 25b7a42833b7a9afdc8421345e624f7d 364 PIRSF PIRSF000188 1 353 5.6E-169 T 12-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 N288_17745 25b7a42833b7a9afdc8421345e624f7d 364 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 217 346 8.5E-12 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_17745 25b7a42833b7a9afdc8421345e624f7d 364 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 148 200 9.8E-6 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_17745 25b7a42833b7a9afdc8421345e624f7d 364 SMART SM00839 144 351 1.5E-72 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_17745 25b7a42833b7a9afdc8421345e624f7d 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 176 196 3.7E-22 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_17745 25b7a42833b7a9afdc8421345e624f7d 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 286 297 3.7E-22 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_17745 25b7a42833b7a9afdc8421345e624f7d 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 132 154 3.7E-22 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_17745 25b7a42833b7a9afdc8421345e624f7d 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 3.7E-22 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_17745 25b7a42833b7a9afdc8421345e624f7d 364 SUPERFAMILY SSF51735 141 347 5.01E-58 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_17745 25b7a42833b7a9afdc8421345e624f7d 364 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 12-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_17745 25b7a42833b7a9afdc8421345e624f7d 364 Gene3D G3DSA:3.40.50.720 134 336 4.5E-155 T 12-10-2018 N288_17745 25b7a42833b7a9afdc8421345e624f7d 364 SUPERFAMILY SSF53223 4 143 1.18E-49 T 12-10-2018 N288_17745 25b7a42833b7a9afdc8421345e624f7d 364 Gene3D G3DSA:3.40.50.10860 10 343 4.5E-155 T 12-10-2018 N288_17745 25b7a42833b7a9afdc8421345e624f7d 364 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 22 131 9.7E-28 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 N288_25675 ca59f32195b4e58d098d4e6ae649fe59 408 SMART SM00382 54 243 4.1E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_25675 ca59f32195b4e58d098d4e6ae649fe59 408 Pfam PF00571 CBS domain 338 390 0.0024 T 12-10-2018 IPR000644 CBS domain N288_25675 ca59f32195b4e58d098d4e6ae649fe59 408 Pfam PF00571 CBS domain 279 323 0.0012 T 12-10-2018 IPR000644 CBS domain N288_25675 ca59f32195b4e58d098d4e6ae649fe59 408 SUPERFAMILY SSF54631 275 392 6.06E-17 T 12-10-2018 N288_25675 ca59f32195b4e58d098d4e6ae649fe59 408 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_25675 ca59f32195b4e58d098d4e6ae649fe59 408 Gene3D G3DSA:3.10.580.10 279 391 3.4E-15 T 12-10-2018 N288_25675 ca59f32195b4e58d098d4e6ae649fe59 408 SUPERFAMILY SSF52540 44 271 2.06E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_25675 ca59f32195b4e58d098d4e6ae649fe59 408 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 390 3.4E-158 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 N288_25675 ca59f32195b4e58d098d4e6ae649fe59 408 SMART SM00116 343 390 0.85 T 12-10-2018 IPR000644 CBS domain N288_25675 ca59f32195b4e58d098d4e6ae649fe59 408 SMART SM00116 283 331 5.8E-4 T 12-10-2018 IPR000644 CBS domain N288_25675 ca59f32195b4e58d098d4e6ae649fe59 408 Pfam PF00005 ABC transporter 46 193 2.5E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_25675 ca59f32195b4e58d098d4e6ae649fe59 408 Gene3D G3DSA:3.40.50.300 1 270 3.3E-72 T 12-10-2018 N288_24145 3e31109f424f9adc6005e8d0921f3b4f 278 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 261 7.0E-80 T 12-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 N288_24145 3e31109f424f9adc6005e8d0921f3b4f 278 SUPERFAMILY SSF53613 1 262 2.65E-73 T 12-10-2018 IPR029056 Ribokinase-like N288_24145 3e31109f424f9adc6005e8d0921f3b4f 278 Gene3D G3DSA:3.40.1190.20 2 274 2.5E-90 T 12-10-2018 IPR029056 Ribokinase-like N288_24145 3e31109f424f9adc6005e8d0921f3b4f 278 Pfam PF08543 Phosphomethylpyrimidine kinase 13 259 3.0E-88 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 N288_09660 f5a142ac1ffe09b2190a680e01f1048a 260 SUPERFAMILY SSF47823 9 59 3.73E-10 T 12-10-2018 N288_09660 f5a142ac1ffe09b2190a680e01f1048a 260 Pfam PF00589 Phage integrase family 74 246 8.2E-47 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 N288_09660 f5a142ac1ffe09b2190a680e01f1048a 260 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 4 260 47.609 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD N288_09660 f5a142ac1ffe09b2190a680e01f1048a 260 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 1 52 2.5E-10 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 N288_09660 f5a142ac1ffe09b2190a680e01f1048a 260 Gene3D G3DSA:1.10.150.130 1 71 5.1E-15 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal N288_09660 f5a142ac1ffe09b2190a680e01f1048a 260 SUPERFAMILY SSF56349 68 257 1.68E-53 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 N288_09660 f5a142ac1ffe09b2190a680e01f1048a 260 Gene3D G3DSA:1.10.443.10 74 253 9.0E-58 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 N288_02320 77665be0cbb36430299f8035b0f8c707 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 458 2.9E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_02320 77665be0cbb36430299f8035b0f8c707 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 1.1E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_02320 77665be0cbb36430299f8035b0f8c707 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 1.1E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_02320 77665be0cbb36430299f8035b0f8c707 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.1E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_02320 77665be0cbb36430299f8035b0f8c707 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 1.1E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_02320 77665be0cbb36430299f8035b0f8c707 461 Gene3D G3DSA:1.10.287.130 223 296 4.8E-19 T 12-10-2018 N288_02320 77665be0cbb36430299f8035b0f8c707 461 SMART SM00388 230 297 4.2E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_02320 77665be0cbb36430299f8035b0f8c707 461 SMART SM00387 343 459 7.4E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_02320 77665be0cbb36430299f8035b0f8c707 461 Gene3D G3DSA:3.30.565.10 306 461 1.1E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_02320 77665be0cbb36430299f8035b0f8c707 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 296 1.9E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_02320 77665be0cbb36430299f8035b0f8c707 461 SUPERFAMILY SSF47384 219 296 1.45E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_02320 77665be0cbb36430299f8035b0f8c707 461 SUPERFAMILY SSF55874 286 457 2.36E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_15285 17b6f5096e0580e3fbcd0761c0fbb487 506 SMART SM00813 295 495 2.8E-85 T 12-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 N288_15285 17b6f5096e0580e3fbcd0761c0fbb487 506 Gene3D G3DSA:2.60.40.1180 10 500 2.3E-225 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_15285 17b6f5096e0580e3fbcd0761c0fbb487 506 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 295 495 8.9E-41 T 12-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 N288_15285 17b6f5096e0580e3fbcd0761c0fbb487 506 SUPERFAMILY SSF51011 374 503 2.3E-40 T 12-10-2018 N288_15285 17b6f5096e0580e3fbcd0761c0fbb487 506 SUPERFAMILY SSF51445 21 385 3.75E-114 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_15285 17b6f5096e0580e3fbcd0761c0fbb487 506 Gene3D G3DSA:3.20.20.80 22 385 2.3E-225 T 12-10-2018 N288_15690 11d4d47d19f5b82c18132ecaffaafd96 303 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 300 1.1E-109 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 N288_15690 11d4d47d19f5b82c18132ecaffaafd96 303 SUPERFAMILY SSF53613 1 301 1.87E-67 T 12-10-2018 IPR029056 Ribokinase-like N288_15690 11d4d47d19f5b82c18132ecaffaafd96 303 Pfam PF00294 pfkB family carbohydrate kinase 8 286 8.4E-56 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB N288_15690 11d4d47d19f5b82c18132ecaffaafd96 303 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 300 1.1E-109 T 12-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 N288_15690 11d4d47d19f5b82c18132ecaffaafd96 303 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 N288_15690 11d4d47d19f5b82c18132ecaffaafd96 303 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 N288_15690 11d4d47d19f5b82c18132ecaffaafd96 303 Gene3D G3DSA:3.40.1190.20 1 303 4.8E-108 T 12-10-2018 IPR029056 Ribokinase-like N288_15690 11d4d47d19f5b82c18132ecaffaafd96 303 PIRSF PIRSF000535 1 303 6.8E-89 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 N288_14915 3afe7c8dfff9660bc3fea7f3f38df191 334 Gene3D G3DSA:3.40.190.10 133 260 9.9E-73 T 12-10-2018 N288_14915 3afe7c8dfff9660bc3fea7f3f38df191 334 Gene3D G3DSA:3.40.190.150 36 323 9.9E-73 T 12-10-2018 N288_14915 3afe7c8dfff9660bc3fea7f3f38df191 334 SUPERFAMILY SSF53850 126 304 5.54E-11 T 12-10-2018 N288_14915 3afe7c8dfff9660bc3fea7f3f38df191 334 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 56 331 6.5E-31 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 N288_14915 3afe7c8dfff9660bc3fea7f3f38df191 334 PIRSF PIRSF017082 1 334 4.9E-107 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 N288_23265 cd967d25356df8a67acfd1a399a3ef09 336 PRINTS PR01713 Nucleotide sugar epimerase signature 292 309 3.6E-7 T 12-10-2018 N288_23265 cd967d25356df8a67acfd1a399a3ef09 336 PRINTS PR01713 Nucleotide sugar epimerase signature 253 268 3.6E-7 T 12-10-2018 N288_23265 cd967d25356df8a67acfd1a399a3ef09 336 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 3.6E-7 T 12-10-2018 N288_23265 cd967d25356df8a67acfd1a399a3ef09 336 Gene3D G3DSA:3.40.50.720 3 271 1.1E-136 T 12-10-2018 N288_23265 cd967d25356df8a67acfd1a399a3ef09 336 SUPERFAMILY SSF51735 2 330 1.66E-93 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_23265 cd967d25356df8a67acfd1a399a3ef09 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 321 1.8E-58 T 12-10-2018 IPR016040 NAD(P)-binding domain N288_23265 cd967d25356df8a67acfd1a399a3ef09 336 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 330 1.1E-132 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 N288_23265 cd967d25356df8a67acfd1a399a3ef09 336 Gene3D G3DSA:3.90.25.10 193 326 1.1E-136 T 12-10-2018 N288_16245 cc52f7f171d75b340db2173b5c47764f 363 Gene3D G3DSA:2.60.120.260 242 360 4.3E-11 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily N288_16245 cc52f7f171d75b340db2173b5c47764f 363 Gene3D G3DSA:3.40.50.1110 47 223 7.7E-21 T 12-10-2018 IPR036514 SGNH hydrolase superfamily N288_16245 cc52f7f171d75b340db2173b5c47764f 363 SUPERFAMILY SSF52266 45 222 1.34E-22 T 12-10-2018 N288_16245 cc52f7f171d75b340db2173b5c47764f 363 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 51 210 3.9E-11 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain N288_05725 febc27d842ea8dbe6b34ad1a50fdd2ce 1490 Gene3D G3DSA:3.60.20.10 21 532 0.0 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_05725 febc27d842ea8dbe6b34ad1a50fdd2ce 1490 Pfam PF01493 GXGXG motif 1370 1407 6.6E-6 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 N288_05725 febc27d842ea8dbe6b34ad1a50fdd2ce 1490 Pfam PF01493 GXGXG motif 1248 1350 3.0E-14 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 N288_05725 febc27d842ea8dbe6b34ad1a50fdd2ce 1490 Gene3D G3DSA:2.160.20.60 1199 1490 1.8E-63 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 N288_05725 febc27d842ea8dbe6b34ad1a50fdd2ce 1490 SUPERFAMILY SSF69336 1203 1487 1.96E-45 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 N288_05725 febc27d842ea8dbe6b34ad1a50fdd2ce 1490 Pfam PF04898 Glutamate synthase central domain 446 726 2.6E-67 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 N288_05725 febc27d842ea8dbe6b34ad1a50fdd2ce 1490 Pfam PF00310 Glutamine amidotransferases class-II 21 386 2.9E-47 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain N288_05725 febc27d842ea8dbe6b34ad1a50fdd2ce 1490 SUPERFAMILY SSF51395 445 1166 3.3E-162 T 12-10-2018 N288_05725 febc27d842ea8dbe6b34ad1a50fdd2ce 1490 Pfam PF01645 Conserved region in glutamate synthase 788 1148 5.8E-102 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 N288_05725 febc27d842ea8dbe6b34ad1a50fdd2ce 1490 SUPERFAMILY SSF56235 21 396 9.65E-74 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_05725 febc27d842ea8dbe6b34ad1a50fdd2ce 1490 Gene3D G3DSA:3.20.20.70 421 773 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_05725 febc27d842ea8dbe6b34ad1a50fdd2ce 1490 Gene3D G3DSA:3.20.20.70 470 1164 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_00080 8e2945f39f0a1a0f26bdc3c664f8fbde 488 SUPERFAMILY SSF51412 141 485 4.71E-127 T 12-10-2018 N288_00080 8e2945f39f0a1a0f26bdc3c664f8fbde 488 SMART SM00116 98 148 2.3E-8 T 12-10-2018 IPR000644 CBS domain N288_00080 8e2945f39f0a1a0f26bdc3c664f8fbde 488 SMART SM00116 161 209 2.1E-9 T 12-10-2018 IPR000644 CBS domain N288_00080 8e2945f39f0a1a0f26bdc3c664f8fbde 488 Gene3D G3DSA:3.20.20.70 1 487 4.9E-226 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_00080 8e2945f39f0a1a0f26bdc3c664f8fbde 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 474 4.3E-167 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 N288_00080 8e2945f39f0a1a0f26bdc3c664f8fbde 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 298 310 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 N288_00080 8e2945f39f0a1a0f26bdc3c664f8fbde 488 PIRSF PIRSF000130 1 488 7.8E-212 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 N288_00080 8e2945f39f0a1a0f26bdc3c664f8fbde 488 SUPERFAMILY SSF51412 5 158 1.28E-31 T 12-10-2018 N288_00080 8e2945f39f0a1a0f26bdc3c664f8fbde 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 10 487 85.779 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 N288_00080 8e2945f39f0a1a0f26bdc3c664f8fbde 488 SMART SM01240 9 474 0.0 T 12-10-2018 N288_00080 8e2945f39f0a1a0f26bdc3c664f8fbde 488 Pfam PF00571 CBS domain 97 144 1.7E-8 T 12-10-2018 IPR000644 CBS domain N288_00080 8e2945f39f0a1a0f26bdc3c664f8fbde 488 Pfam PF00571 CBS domain 153 204 7.5E-8 T 12-10-2018 IPR000644 CBS domain N288_00080 8e2945f39f0a1a0f26bdc3c664f8fbde 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 10 456 5.5E-203 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 N288_20865 12a5baabc76b90529625fe4b9684d9e6 437 Pfam PF13726 Na+-H+ antiporter family 2 88 8.2E-33 T 12-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal N288_20865 12a5baabc76b90529625fe4b9684d9e6 437 Pfam PF03553 Na+/H+ antiporter family 150 431 1.2E-68 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 N288_08550 d6f17f75a230335b39e8a66afc159875 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.9E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08550 d6f17f75a230335b39e8a66afc159875 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.9E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08550 d6f17f75a230335b39e8a66afc159875 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.9E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08550 d6f17f75a230335b39e8a66afc159875 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.2E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08550 d6f17f75a230335b39e8a66afc159875 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.2E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08550 d6f17f75a230335b39e8a66afc159875 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 8.2E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08550 d6f17f75a230335b39e8a66afc159875 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 8.2E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08550 d6f17f75a230335b39e8a66afc159875 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 8.2E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08550 d6f17f75a230335b39e8a66afc159875 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 8.2E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08550 d6f17f75a230335b39e8a66afc159875 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 256 9.1E-61 T 12-10-2018 N288_08550 d6f17f75a230335b39e8a66afc159875 260 SUPERFAMILY SSF51735 6 256 6.76E-83 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_08550 d6f17f75a230335b39e8a66afc159875 260 Gene3D G3DSA:3.40.50.720 2 259 3.9E-79 T 12-10-2018 N288_06825 706268257836cc8cd7032ea3af943c19 111 ProDom PD073069 YHAI 3D-STRUCTURE 12 103 4.0E-14 T 12-10-2018 IPR015058 Protein of unknown function DUF1878 N288_06825 706268257836cc8cd7032ea3af943c19 111 Gene3D G3DSA:1.10.3750.10 2 111 1.8E-38 T 12-10-2018 IPR035945 YhaI-like superfamily N288_06825 706268257836cc8cd7032ea3af943c19 111 Pfam PF08963 Protein of unknown function (DUF1878) 6 111 1.6E-44 T 12-10-2018 IPR015058 Protein of unknown function DUF1878 N288_06825 706268257836cc8cd7032ea3af943c19 111 SUPERFAMILY SSF109915 6 109 7.45E-30 T 12-10-2018 IPR035945 YhaI-like superfamily N288_21120 66647cbb6a262ace24220aa2b7e4adfd 409 PIRSF PIRSF005572 20 408 1.3E-57 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 N288_21120 66647cbb6a262ace24220aa2b7e4adfd 409 Gene3D G3DSA:3.90.1150.10 6 398 1.3E-185 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_21120 66647cbb6a262ace24220aa2b7e4adfd 409 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 215 234 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site N288_21120 66647cbb6a262ace24220aa2b7e4adfd 409 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 4 406 1.6E-192 T 12-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 N288_21120 66647cbb6a262ace24220aa2b7e4adfd 409 Gene3D G3DSA:3.40.640.10 34 294 1.3E-185 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_21120 66647cbb6a262ace24220aa2b7e4adfd 409 SUPERFAMILY SSF53383 1 401 4.71E-133 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_21120 66647cbb6a262ace24220aa2b7e4adfd 409 Pfam PF00266 Aminotransferase class-V 23 394 6.1E-164 T 12-10-2018 IPR000192 Aminotransferase class V domain N288_03695 af4031210f91a2cf94096249c6b1f051 412 Gene3D G3DSA:3.30.300.310 312 412 1.0E-33 T 12-10-2018 N288_03695 af4031210f91a2cf94096249c6b1f051 412 Pfam PF13193 AMP-binding enzyme C-terminal domain 324 399 2.1E-20 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain N288_03695 af4031210f91a2cf94096249c6b1f051 412 ProSitePatterns PS00455 Putative AMP-binding domain signature. 67 78 - T 12-10-2018 IPR020845 AMP-binding, conserved site N288_03695 af4031210f91a2cf94096249c6b1f051 412 Pfam PF00501 AMP-binding enzyme 1 315 2.8E-73 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 N288_03695 af4031210f91a2cf94096249c6b1f051 412 SUPERFAMILY SSF56801 1 409 4.32E-118 T 12-10-2018 N288_03695 af4031210f91a2cf94096249c6b1f051 412 Gene3D G3DSA:3.40.50.12780 1 311 3.7E-84 T 12-10-2018 N288_12625 8b2dd4a6b341b894bb28f3411d92131b 160 SMART SM00448 5 116 3.4E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_12625 8b2dd4a6b341b894bb28f3411d92131b 160 Pfam PF00072 Response regulator receiver domain 7 115 5.8E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_12625 8b2dd4a6b341b894bb28f3411d92131b 160 SUPERFAMILY SSF52172 4 124 1.29E-32 T 12-10-2018 IPR011006 CheY-like superfamily N288_12625 8b2dd4a6b341b894bb28f3411d92131b 160 Gene3D G3DSA:3.40.50.2300 1 130 3.2E-35 T 12-10-2018 N288_17060 f43dfc54d3b4de0e40a7814db05edd5d 188 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 65 81 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 N288_17060 f43dfc54d3b4de0e40a7814db05edd5d 188 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 114 124 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 N288_17060 f43dfc54d3b4de0e40a7814db05edd5d 188 Pfam PF01227 GTP cyclohydrolase I 9 186 6.5E-81 T 12-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 N288_17060 f43dfc54d3b4de0e40a7814db05edd5d 188 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 9 187 8.6E-79 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 N288_17060 f43dfc54d3b4de0e40a7814db05edd5d 188 Gene3D G3DSA:1.10.286.10 1 54 1.3E-23 T 12-10-2018 N288_17060 f43dfc54d3b4de0e40a7814db05edd5d 188 SUPERFAMILY SSF55620 4 187 1.41E-78 T 12-10-2018 N288_17060 f43dfc54d3b4de0e40a7814db05edd5d 188 Gene3D G3DSA:3.30.1130.10 55 188 1.5E-62 T 12-10-2018 N288_17060 f43dfc54d3b4de0e40a7814db05edd5d 188 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 5 187 42.673 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 N288_02175 011cea8c248a4bd4d81a5ae43e95164a 581 SUPERFAMILY SSF55874 436 578 4.32E-14 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_02175 011cea8c248a4bd4d81a5ae43e95164a 581 SMART SM00304 316 368 8.1E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_02175 011cea8c248a4bd4d81a5ae43e95164a 581 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 483 579 2.8E-5 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_02175 011cea8c248a4bd4d81a5ae43e95164a 581 Pfam PF06580 Histidine kinase 380 459 2.4E-22 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 N288_02175 011cea8c248a4bd4d81a5ae43e95164a 581 Gene3D G3DSA:3.30.565.10 437 580 6.1E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_13600 7c7507e0fdf1d3059487841e83ccf466 487 Gene3D G3DSA:3.40.630.10 45 292 4.5E-45 T 12-10-2018 N288_13600 7c7507e0fdf1d3059487841e83ccf466 487 Pfam PF07687 Peptidase dimerisation domain 238 385 5.9E-16 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain N288_13600 7c7507e0fdf1d3059487841e83ccf466 487 Pfam PF01546 Peptidase family M20/M25/M40 117 481 4.3E-37 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_13600 7c7507e0fdf1d3059487841e83ccf466 487 Gene3D G3DSA:3.40.630.10 395 473 3.9E-13 T 12-10-2018 N288_13600 7c7507e0fdf1d3059487841e83ccf466 487 SUPERFAMILY SSF53187 40 482 1.54E-54 T 12-10-2018 N288_13600 7c7507e0fdf1d3059487841e83ccf466 487 Gene3D G3DSA:3.30.70.360 327 394 3.9E-13 T 12-10-2018 N288_13600 7c7507e0fdf1d3059487841e83ccf466 487 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 115 124 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 N288_13600 7c7507e0fdf1d3059487841e83ccf466 487 SUPERFAMILY SSF55031 242 388 1.13E-10 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_12420 3fb9480c1ee3e3d1eda498fd33e3fe0f 137 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 4 130 1.3E-45 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 N288_12420 3fb9480c1ee3e3d1eda498fd33e3fe0f 137 Gene3D G3DSA:2.60.120.460 1 133 1.0E-46 T 12-10-2018 IPR035917 YjbQ-like superfamily N288_12420 3fb9480c1ee3e3d1eda498fd33e3fe0f 137 SUPERFAMILY SSF111038 4 132 7.59E-42 T 12-10-2018 IPR035917 YjbQ-like superfamily N288_12420 3fb9480c1ee3e3d1eda498fd33e3fe0f 137 PIRSF PIRSF004681 1 133 1.3E-33 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 N288_12420 3fb9480c1ee3e3d1eda498fd33e3fe0f 137 Pfam PF01894 Uncharacterised protein family UPF0047 17 129 1.3E-35 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 N288_04810 0debcd6651738e558be3d098e36c7af7 342 Pfam PF01740 STAS domain 225 322 7.2E-7 T 12-10-2018 IPR002645 STAS domain N288_04810 0debcd6651738e558be3d098e36c7af7 342 Gene3D G3DSA:3.30.750.24 216 333 8.0E-29 T 12-10-2018 IPR036513 STAS domain superfamily N288_04810 0debcd6651738e558be3d098e36c7af7 342 SUPERFAMILY SSF111126 47 155 3.92E-7 T 12-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily N288_04810 0debcd6651738e558be3d098e36c7af7 342 SUPERFAMILY SSF52091 219 329 1.31E-10 T 12-10-2018 IPR036513 STAS domain superfamily N288_19565 9233257b2b62af4d4062685101eeb504 877 SMART SM00475 3 262 2.7E-146 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 N288_19565 9233257b2b62af4d4062685101eeb504 877 Pfam PF00476 DNA polymerase family A 499 874 3.1E-163 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_19565 9233257b2b62af4d4062685101eeb504 877 TIGRFAM TIGR00593 pola: DNA polymerase I 5 877 0.0 T 12-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_19565 9233257b2b62af4d4062685101eeb504 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 626 641 1.1E-81 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_19565 9233257b2b62af4d4062685101eeb504 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 649 672 1.1E-81 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_19565 9233257b2b62af4d4062685101eeb504 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 603 625 1.1E-81 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_19565 9233257b2b62af4d4062685101eeb504 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 740 751 1.1E-81 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_19565 9233257b2b62af4d4062685101eeb504 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 824 837 1.1E-81 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_19565 9233257b2b62af4d4062685101eeb504 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 692 1.1E-81 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_19565 9233257b2b62af4d4062685101eeb504 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 762 773 1.1E-81 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_19565 9233257b2b62af4d4062685101eeb504 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 810 1.1E-81 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_19565 9233257b2b62af4d4062685101eeb504 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 728 1.1E-81 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_19565 9233257b2b62af4d4062685101eeb504 877 SUPERFAMILY SSF53098 302 469 4.86E-47 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily N288_19565 9233257b2b62af4d4062685101eeb504 877 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 172 265 1.6E-33 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 N288_19565 9233257b2b62af4d4062685101eeb504 877 Gene3D G3DSA:1.10.150.20 658 801 1.5E-109 T 12-10-2018 N288_19565 9233257b2b62af4d4062685101eeb504 877 Gene3D G3DSA:3.30.420.10 298 490 2.6E-66 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 N288_19565 9233257b2b62af4d4062685101eeb504 877 SMART SM00279 173 208 1.5E-17 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 N288_19565 9233257b2b62af4d4062685101eeb504 877 ProSitePatterns PS00447 DNA polymerase family A signature. 703 722 - T 12-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_19565 9233257b2b62af4d4062685101eeb504 877 SUPERFAMILY SSF88723 2 170 3.6E-55 T 12-10-2018 IPR029060 PIN-like domain superfamily N288_19565 9233257b2b62af4d4062685101eeb504 877 Gene3D G3DSA:3.40.50.1010 5 278 7.4E-98 T 12-10-2018 N288_19565 9233257b2b62af4d4062685101eeb504 877 SUPERFAMILY SSF47807 171 285 3.44E-32 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily N288_19565 9233257b2b62af4d4062685101eeb504 877 Gene3D G3DSA:3.30.70.370 612 873 1.5E-109 T 12-10-2018 N288_19565 9233257b2b62af4d4062685101eeb504 877 SMART SM00482 634 841 7.8E-122 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_19565 9233257b2b62af4d4062685101eeb504 877 SUPERFAMILY SSF56672 471 877 3.11E-161 T 12-10-2018 N288_19565 9233257b2b62af4d4062685101eeb504 877 Gene3D G3DSA:1.20.1060.10 492 606 1.4E-45 T 12-10-2018 N288_19565 9233257b2b62af4d4062685101eeb504 877 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 170 1.2E-52 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 N288_19565 9233257b2b62af4d4062685101eeb504 877 Gene3D G3DSA:1.10.150.20 174 247 7.4E-98 T 12-10-2018 N288_19565 9233257b2b62af4d4062685101eeb504 877 SMART SM00474 300 467 4.1E-17 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 N288_13065 9493aa97473fa6ce418825f480180b64 217 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 14 210 1.9E-63 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 N288_13065 9493aa97473fa6ce418825f480180b64 217 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 13 216 27.855 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 N288_13065 9493aa97473fa6ce418825f480180b64 217 Gene3D G3DSA:3.20.20.70 1 216 1.9E-72 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_13065 9493aa97473fa6ce418825f480180b64 217 SUPERFAMILY SSF51391 6 213 1.7E-64 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 N288_13065 9493aa97473fa6ce418825f480180b64 217 Pfam PF02581 Thiamine monophosphate synthase 15 198 2.7E-58 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 N288_11870 b6571726296a7f6fd29731f2712a45ee 302 SUPERFAMILY SSF53850 58 254 1.54E-40 T 12-10-2018 N288_11870 b6571726296a7f6fd29731f2712a45ee 302 Gene3D G3DSA:3.40.190.10 43 268 8.8E-70 T 12-10-2018 N288_11870 b6571726296a7f6fd29731f2712a45ee 302 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 43 287 2.8E-71 T 12-10-2018 N288_11870 b6571726296a7f6fd29731f2712a45ee 302 Gene3D G3DSA:3.40.190.10 125 240 8.8E-70 T 12-10-2018 N288_11870 b6571726296a7f6fd29731f2712a45ee 302 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 264 2.8E-67 T 12-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 N288_08170 10b8c11c2a01d2f9ab4b5d4200600b88 430 Gene3D G3DSA:3.40.190.10 154 419 2.8E-85 T 12-10-2018 N288_08170 10b8c11c2a01d2f9ab4b5d4200600b88 430 Pfam PF01547 Bacterial extracellular solute-binding protein 52 343 1.1E-39 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein N288_08170 10b8c11c2a01d2f9ab4b5d4200600b88 430 SUPERFAMILY SSF53850 39 425 4.69E-78 T 12-10-2018 N288_08170 10b8c11c2a01d2f9ab4b5d4200600b88 430 Gene3D G3DSA:3.40.190.10 41 391 2.8E-85 T 12-10-2018 N288_09335 a59b4fae075147f84729e9493378c540 368 SMART SM01097 1 131 3.4E-86 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09335 a59b4fae075147f84729e9493378c540 368 PRINTS PR00096 Glutamine amidotransferase superfamily signature 214 223 1.0E-11 T 12-10-2018 N288_09335 a59b4fae075147f84729e9493378c540 368 PRINTS PR00096 Glutamine amidotransferase superfamily signature 327 340 1.0E-11 T 12-10-2018 N288_09335 a59b4fae075147f84729e9493378c540 368 PRINTS PR00096 Glutamine amidotransferase superfamily signature 241 252 1.0E-11 T 12-10-2018 N288_09335 a59b4fae075147f84729e9493378c540 368 SUPERFAMILY SSF52021 1 145 1.1E-56 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09335 a59b4fae075147f84729e9493378c540 368 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 356 49.301 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09335 a59b4fae075147f84729e9493378c540 368 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 130 7.6E-52 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09335 a59b4fae075147f84729e9493378c540 368 Gene3D G3DSA:3.50.30.20 1 148 1.9E-56 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09335 a59b4fae075147f84729e9493378c540 368 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 353 2.3E-144 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09335 a59b4fae075147f84729e9493378c540 368 Gene3D G3DSA:3.40.50.880 165 360 3.5E-35 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_09335 a59b4fae075147f84729e9493378c540 368 SUPERFAMILY SSF52317 141 353 2.02E-56 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_09335 a59b4fae075147f84729e9493378c540 368 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 172 186 1.3E-36 T 12-10-2018 N288_09335 a59b4fae075147f84729e9493378c540 368 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 211 225 1.3E-36 T 12-10-2018 N288_09335 a59b4fae075147f84729e9493378c540 368 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 258 275 1.3E-36 T 12-10-2018 N288_09335 a59b4fae075147f84729e9493378c540 368 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 241 257 1.3E-36 T 12-10-2018 N288_09335 a59b4fae075147f84729e9493378c540 368 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 283 294 1.3E-36 T 12-10-2018 N288_09335 a59b4fae075147f84729e9493378c540 368 Pfam PF00117 Glutamine amidotransferase class-I 174 350 4.4E-45 T 12-10-2018 IPR017926 Glutamine amidotransferase N288_09335 a59b4fae075147f84729e9493378c540 368 PRINTS PR00097 Anthranilate synthase component II signature 327 340 1.8E-6 T 12-10-2018 N288_09335 a59b4fae075147f84729e9493378c540 368 PRINTS PR00097 Anthranilate synthase component II signature 241 252 1.8E-6 T 12-10-2018 N288_09335 a59b4fae075147f84729e9493378c540 368 PRINTS PR00097 Anthranilate synthase component II signature 214 223 1.8E-6 T 12-10-2018 N288_03420 dd04af6bea1d48bc9eb213f880af286e 243 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 217 1.7E-52 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 N288_03420 dd04af6bea1d48bc9eb213f880af286e 243 ProSitePatterns PS01218 TatC family signature. 145 164 - T 12-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site N288_03420 dd04af6bea1d48bc9eb213f880af286e 243 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 212 1.1E-51 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 N288_03420 dd04af6bea1d48bc9eb213f880af286e 243 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 230 14.472 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 N288_03420 dd04af6bea1d48bc9eb213f880af286e 243 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 76 94 2.3E-28 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 N288_03420 dd04af6bea1d48bc9eb213f880af286e 243 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 145 173 2.3E-28 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 N288_03420 dd04af6bea1d48bc9eb213f880af286e 243 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 2.3E-28 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 N288_03420 dd04af6bea1d48bc9eb213f880af286e 243 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 94 120 2.3E-28 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 N288_21430 d5b99b1144ae43e12e8685d9eb8ab91c 97 SMART SM00450 4 96 1.0E-18 T 12-10-2018 IPR001763 Rhodanese-like domain N288_21430 d5b99b1144ae43e12e8685d9eb8ab91c 97 Pfam PF00581 Rhodanese-like domain 5 93 3.1E-15 T 12-10-2018 IPR001763 Rhodanese-like domain N288_21430 d5b99b1144ae43e12e8685d9eb8ab91c 97 Gene3D G3DSA:3.40.250.10 2 96 1.1E-27 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_21430 d5b99b1144ae43e12e8685d9eb8ab91c 97 SUPERFAMILY SSF52821 3 93 2.62E-30 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_14990 d02550174fd5b2121fb85ad14a61aaa2 347 SUPERFAMILY SSF51735 3 155 7.98E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_14990 d02550174fd5b2121fb85ad14a61aaa2 347 SUPERFAMILY SSF55347 130 280 2.13E-33 T 12-10-2018 N288_14990 d02550174fd5b2121fb85ad14a61aaa2 347 Gene3D G3DSA:3.40.50.720 7 314 8.5E-104 T 12-10-2018 N288_14990 d02550174fd5b2121fb85ad14a61aaa2 347 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 2 15 7.0E-6 T 12-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 N288_14990 d02550174fd5b2121fb85ad14a61aaa2 347 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 113 127 7.0E-6 T 12-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 N288_14990 d02550174fd5b2121fb85ad14a61aaa2 347 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 251 266 7.0E-6 T 12-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 N288_14990 d02550174fd5b2121fb85ad14a61aaa2 347 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 307 323 7.0E-6 T 12-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 N288_14990 d02550174fd5b2121fb85ad14a61aaa2 347 Gene3D G3DSA:3.30.360.10 128 335 8.5E-104 T 12-10-2018 N288_14990 d02550174fd5b2121fb85ad14a61aaa2 347 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 239 2.3E-10 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 N288_14990 d02550174fd5b2121fb85ad14a61aaa2 347 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 123 4.8E-31 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 N288_19530 9db1b727cb3cb360c0919599f568b822 152 Pfam PF03477 ATP cone domain 50 136 1.1E-20 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 N288_19530 9db1b727cb3cb360c0919599f568b822 152 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 6.3E-73 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 N288_19530 9db1b727cb3cb360c0919599f568b822 152 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 152 88.157 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 N288_09635 22c368ce6297a5a4dc1c57ae089620ea 386 Gene3D G3DSA:3.40.50.261 240 386 1.4E-58 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 N288_09635 22c368ce6297a5a4dc1c57ae089620ea 386 Pfam PF08442 ATP-grasp domain 2 203 1.7E-83 T 12-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 N288_09635 22c368ce6297a5a4dc1c57ae089620ea 386 SUPERFAMILY SSF52210 239 385 9.55E-56 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 N288_09635 22c368ce6297a5a4dc1c57ae089620ea 386 Pfam PF00549 CoA-ligase 262 380 3.2E-26 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 N288_09635 22c368ce6297a5a4dc1c57ae089620ea 386 Gene3D G3DSA:3.30.470.20 1 234 7.1E-100 T 12-10-2018 N288_09635 22c368ce6297a5a4dc1c57ae089620ea 386 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 12-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 N288_09635 22c368ce6297a5a4dc1c57ae089620ea 386 Gene3D G3DSA:3.30.1490.20 21 104 7.1E-100 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 N288_09635 22c368ce6297a5a4dc1c57ae089620ea 386 SUPERFAMILY SSF56059 1 238 7.63E-87 T 12-10-2018 N288_09635 22c368ce6297a5a4dc1c57ae089620ea 386 PIRSF PIRSF001554 1 386 5.7E-158 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 N288_09635 22c368ce6297a5a4dc1c57ae089620ea 386 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 45.48 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 N288_09635 22c368ce6297a5a4dc1c57ae089620ea 386 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 384 2.5E-167 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 N288_19250 6036f149f88f6cee982e5a08eca1aa83 427 TIGRFAM TIGR00115 tig: trigger factor 12 421 9.7E-145 T 12-10-2018 IPR005215 Trigger factor GO:0015031 N288_19250 6036f149f88f6cee982e5a08eca1aa83 427 Hamap MF_00303 Trigger factor [tig]. 1 427 24.503 T 12-10-2018 IPR005215 Trigger factor GO:0015031 N288_19250 6036f149f88f6cee982e5a08eca1aa83 427 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 1.1E-44 T 12-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 N288_19250 6036f149f88f6cee982e5a08eca1aa83 427 Gene3D G3DSA:1.10.3120.10 117 425 6.3E-98 T 12-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 N288_19250 6036f149f88f6cee982e5a08eca1aa83 427 SUPERFAMILY SSF109998 250 425 5.23E-47 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily N288_19250 6036f149f88f6cee982e5a08eca1aa83 427 SUPERFAMILY SSF54534 89 243 5.11E-39 T 12-10-2018 N288_19250 6036f149f88f6cee982e5a08eca1aa83 427 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 239 5.5E-16 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain N288_19250 6036f149f88f6cee982e5a08eca1aa83 427 PIRSF PIRSF003095 1 427 1.9E-141 T 12-10-2018 IPR005215 Trigger factor GO:0015031 N288_19250 6036f149f88f6cee982e5a08eca1aa83 427 SUPERFAMILY SSF102735 1 132 1.19E-39 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 N288_19250 6036f149f88f6cee982e5a08eca1aa83 427 Gene3D G3DSA:3.10.50.40 151 248 6.3E-98 T 12-10-2018 N288_19250 6036f149f88f6cee982e5a08eca1aa83 427 Gene3D G3DSA:3.30.70.1050 1 116 4.9E-31 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 N288_19250 6036f149f88f6cee982e5a08eca1aa83 427 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 422 8.9E-49 T 12-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 N288_14930 3799faf9b782d53af6dcb9ddd3e6f6b1 143 Pfam PF14275 Domain of unknown function (DUF4362) 35 125 3.8E-36 T 12-10-2018 IPR025372 Protein of unknown function DUF4362 N288_03050 99780e9f1a650088524774a80047735e 236 Gene3D G3DSA:3.40.50.2300 1 134 1.6E-32 T 12-10-2018 N288_03050 99780e9f1a650088524774a80047735e 236 SUPERFAMILY SSF46894 135 231 2.61E-25 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_03050 99780e9f1a650088524774a80047735e 236 Gene3D G3DSA:1.10.10.10 135 236 5.5E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_03050 99780e9f1a650088524774a80047735e 236 Pfam PF00072 Response regulator receiver domain 6 115 4.9E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_03050 99780e9f1a650088524774a80047735e 236 SMART SM00448 4 115 5.4E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_03050 99780e9f1a650088524774a80047735e 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 1.2E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_03050 99780e9f1a650088524774a80047735e 236 SUPERFAMILY SSF52172 3 128 5.41E-35 T 12-10-2018 IPR011006 CheY-like superfamily N288_03050 99780e9f1a650088524774a80047735e 236 SMART SM00862 154 230 2.5E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_19745 d260fed5a7beb2b1731dcb0db9b32ca1 171 PIRSF PIRSF006443 1 170 3.3E-67 T 12-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 N288_19745 d260fed5a7beb2b1731dcb0db9b32ca1 171 Pfam PF00994 Probable molybdopterin binding domain 18 161 4.1E-33 T 12-10-2018 IPR001453 MoaB/Mog domain N288_19745 d260fed5a7beb2b1731dcb0db9b32ca1 171 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 14 157 1.8E-36 T 12-10-2018 IPR001453 MoaB/Mog domain N288_19745 d260fed5a7beb2b1731dcb0db9b32ca1 171 Gene3D G3DSA:3.40.980.10 1 169 3.2E-49 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily N288_19745 d260fed5a7beb2b1731dcb0db9b32ca1 171 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 75 88 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 N288_19745 d260fed5a7beb2b1731dcb0db9b32ca1 171 SMART SM00852 17 162 2.3E-27 T 12-10-2018 IPR001453 MoaB/Mog domain N288_19745 d260fed5a7beb2b1731dcb0db9b32ca1 171 SUPERFAMILY SSF53218 8 166 8.9E-41 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily N288_06520 5a3da48a08a2d304cf2ae710472bbd7a 390 Pfam PF01979 Amidohydrolase family 53 374 4.8E-17 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 N288_06520 5a3da48a08a2d304cf2ae710472bbd7a 390 SUPERFAMILY SSF51338 2 389 2.68E-19 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_06520 5a3da48a08a2d304cf2ae710472bbd7a 390 Gene3D G3DSA:2.30.40.10 4 390 1.0E-152 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_06520 5a3da48a08a2d304cf2ae710472bbd7a 390 SUPERFAMILY SSF51556 57 347 2.1E-77 T 12-10-2018 IPR032466 Metal-dependent hydrolase N288_06520 5a3da48a08a2d304cf2ae710472bbd7a 390 PIRSF PIRSF001238 1 390 1.1E-165 T 12-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 N288_06520 5a3da48a08a2d304cf2ae710472bbd7a 390 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 2 390 2.9E-175 T 12-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 N288_06520 5a3da48a08a2d304cf2ae710472bbd7a 390 Gene3D G3DSA:3.20.20.140 58 343 1.0E-152 T 12-10-2018 N288_06535 da81302fd102b4e57b0e508263d7bc97 380 SUPERFAMILY SSF48179 201 378 2.28E-43 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_06535 da81302fd102b4e57b0e508263d7bc97 380 Gene3D G3DSA:1.10.1040.10 204 379 1.3E-64 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 N288_06535 da81302fd102b4e57b0e508263d7bc97 380 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 152 365 1.1E-49 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 N288_06535 da81302fd102b4e57b0e508263d7bc97 380 Gene3D G3DSA:3.40.50.720 2 202 4.8E-68 T 12-10-2018 N288_06535 da81302fd102b4e57b0e508263d7bc97 380 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 2.4E-23 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 N288_06535 da81302fd102b4e57b0e508263d7bc97 380 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 375 38.034 T 12-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 N288_06535 da81302fd102b4e57b0e508263d7bc97 380 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 152 164 - T 12-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 N288_06535 da81302fd102b4e57b0e508263d7bc97 380 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 8.0E-13 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 N288_06535 da81302fd102b4e57b0e508263d7bc97 380 PRINTS PR00084 Mannitol dehydrogenase signature 152 165 8.0E-13 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 N288_06535 da81302fd102b4e57b0e508263d7bc97 380 PRINTS PR00084 Mannitol dehydrogenase signature 116 129 8.0E-13 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 N288_06535 da81302fd102b4e57b0e508263d7bc97 380 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 8.0E-13 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 N288_06535 da81302fd102b4e57b0e508263d7bc97 380 SUPERFAMILY SSF51735 3 187 4.73E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_11290 d4074038a2f14d4f0e49594aa4a7a2ff 284 Gene3D G3DSA:3.40.50.720 1 187 1.4E-65 T 12-10-2018 N288_11290 d4074038a2f14d4f0e49594aa4a7a2ff 284 PIRSF PIRSF000105 1 284 5.8E-93 T 12-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 N288_11290 d4074038a2f14d4f0e49594aa4a7a2ff 284 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 185 280 7.1E-31 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 N288_11290 d4074038a2f14d4f0e49594aa4a7a2ff 284 Gene3D G3DSA:1.10.1040.10 188 284 2.9E-32 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 N288_11290 d4074038a2f14d4f0e49594aa4a7a2ff 284 SUPERFAMILY SSF48179 184 282 8.08E-31 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_11290 d4074038a2f14d4f0e49594aa4a7a2ff 284 SUPERFAMILY SSF51735 1 184 1.73E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_11290 d4074038a2f14d4f0e49594aa4a7a2ff 284 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3 182 1.7E-60 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 N288_08960 fd570311a479360c1ef2bf36fea51f95 625 Gene3D G3DSA:1.20.210.10 2 528 5.5E-201 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08960 fd570311a479360c1ef2bf36fea51f95 625 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 25 468 6.9E-148 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08960 fd570311a479360c1ef2bf36fea51f95 625 SUPERFAMILY SSF81442 14 522 4.19E-177 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08960 fd570311a479360c1ef2bf36fea51f95 625 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 244 298 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08960 fd570311a479360c1ef2bf36fea51f95 625 PRINTS PR01165 Cytochrome c oxidase subunit I signature 162 180 2.3E-102 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08960 fd570311a479360c1ef2bf36fea51f95 625 PRINTS PR01165 Cytochrome c oxidase subunit I signature 347 365 2.3E-102 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08960 fd570311a479360c1ef2bf36fea51f95 625 PRINTS PR01165 Cytochrome c oxidase subunit I signature 242 263 2.3E-102 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08960 fd570311a479360c1ef2bf36fea51f95 625 PRINTS PR01165 Cytochrome c oxidase subunit I signature 312 333 2.3E-102 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08960 fd570311a479360c1ef2bf36fea51f95 625 PRINTS PR01165 Cytochrome c oxidase subunit I signature 63 86 2.3E-102 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08960 fd570311a479360c1ef2bf36fea51f95 625 PRINTS PR01165 Cytochrome c oxidase subunit I signature 132 144 2.3E-102 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08960 fd570311a479360c1ef2bf36fea51f95 625 PRINTS PR01165 Cytochrome c oxidase subunit I signature 90 114 2.3E-102 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08960 fd570311a479360c1ef2bf36fea51f95 625 PRINTS PR01165 Cytochrome c oxidase subunit I signature 288 303 2.3E-102 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08960 fd570311a479360c1ef2bf36fea51f95 625 PRINTS PR01165 Cytochrome c oxidase subunit I signature 191 210 2.3E-102 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08960 fd570311a479360c1ef2bf36fea51f95 625 PRINTS PR01165 Cytochrome c oxidase subunit I signature 375 394 2.3E-102 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08960 fd570311a479360c1ef2bf36fea51f95 625 PRINTS PR01165 Cytochrome c oxidase subunit I signature 16 41 2.3E-102 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08960 fd570311a479360c1ef2bf36fea51f95 625 PRINTS PR01165 Cytochrome c oxidase subunit I signature 425 446 2.3E-102 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08960 fd570311a479360c1ef2bf36fea51f95 625 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 17 520 7.0E-206 T 12-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 N288_05895 c663c474b3b5b6241667622d7bff80bf 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 309 3.0E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_05895 c663c474b3b5b6241667622d7bff80bf 313 Gene3D G3DSA:1.10.3720.10 70 312 5.0E-62 T 12-10-2018 IPR035906 MetI-like superfamily N288_05895 c663c474b3b5b6241667622d7bff80bf 313 SUPERFAMILY SSF161098 74 299 9.29E-54 T 12-10-2018 IPR035906 MetI-like superfamily N288_08355 e026841b08cfb3698bee3111055a5687 602 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 47 72 2.2E-18 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 N288_08355 e026841b08cfb3698bee3111055a5687 602 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 424 451 2.2E-18 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 N288_08355 e026841b08cfb3698bee3111055a5687 602 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 453 482 2.2E-18 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 N288_08355 e026841b08cfb3698bee3111055a5687 602 SMART SM00283 326 601 1.3E-83 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_08355 e026841b08cfb3698bee3111055a5687 602 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 387 555 4.1E-48 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_08355 e026841b08cfb3698bee3111055a5687 602 SUPERFAMILY SSF58104 270 600 1.31E-72 T 12-10-2018 N288_08355 e026841b08cfb3698bee3111055a5687 602 SMART SM00304 244 297 5.5E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_08355 e026841b08cfb3698bee3111055a5687 602 Gene3D G3DSA:1.10.287.950 283 601 1.5E-73 T 12-10-2018 N288_22500 9495c8cb5af126614d2cd84ee0b941ba 274 SUPERFAMILY SSF49899 43 269 6.33E-65 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily N288_22500 9495c8cb5af126614d2cd84ee0b941ba 274 Pfam PF00722 Glycosyl hydrolases family 16 87 265 8.5E-32 T 12-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 N288_22500 9495c8cb5af126614d2cd84ee0b941ba 274 Gene3D G3DSA:2.60.120.200 43 271 9.8E-71 T 12-10-2018 N288_07720 65f38244918d7bf3c79ebdb9cb6e7ce6 212 Gene3D G3DSA:1.10.287.860 147 210 1.4E-27 T 12-10-2018 N288_07720 65f38244918d7bf3c79ebdb9cb6e7ce6 212 Gene3D G3DSA:3.30.460.10 1 146 2.9E-52 T 12-10-2018 N288_07720 65f38244918d7bf3c79ebdb9cb6e7ce6 212 Pfam PF04607 Region found in RelA / SpoT proteins 43 162 2.1E-37 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 N288_07720 65f38244918d7bf3c79ebdb9cb6e7ce6 212 SUPERFAMILY SSF81301 4 199 1.8E-58 T 12-10-2018 N288_07720 65f38244918d7bf3c79ebdb9cb6e7ce6 212 SMART SM00954 43 164 5.5E-42 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 N288_19610 3162fb50619811a14a34d804968e7dc3 152 Pfam PF04284 Protein of unknown function (DUF441) 6 145 7.6E-47 T 12-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame N288_19610 3162fb50619811a14a34d804968e7dc3 152 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 20 130 2.0E-37 T 12-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame N288_19610 3162fb50619811a14a34d804968e7dc3 152 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 2 148 18.383 T 12-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame N288_17025 de7ef872ada563313d2a52ef8dcca090 390 ProSitePatterns PS00787 Chorismate synthase signature 1. 7 22 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 N288_17025 de7ef872ada563313d2a52ef8dcca090 390 Gene3D G3DSA:3.60.150.10 1 390 5.6E-153 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 N288_17025 de7ef872ada563313d2a52ef8dcca090 390 SUPERFAMILY SSF103263 1 389 1.44E-146 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 N288_17025 de7ef872ada563313d2a52ef8dcca090 390 Pfam PF01264 Chorismate synthase 1 364 1.4E-124 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 N288_17025 de7ef872ada563313d2a52ef8dcca090 390 PIRSF PIRSF001456 1 384 1.8E-129 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 N288_17025 de7ef872ada563313d2a52ef8dcca090 390 Hamap MF_00300 Chorismate synthase [aroC]. 1 372 36.126 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 N288_17025 de7ef872ada563313d2a52ef8dcca090 390 TIGRFAM TIGR00033 aroC: chorismate synthase 1 368 9.1E-129 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 N288_17025 de7ef872ada563313d2a52ef8dcca090 390 ProSitePatterns PS00789 Chorismate synthase signature 3. 339 355 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 N288_11765 05a614a0882609f5aec86efd1a48e474 159 Pfam PF12867 DinB superfamily 17 146 1.0E-14 T 12-10-2018 IPR024775 DinB-like domain N288_11765 05a614a0882609f5aec86efd1a48e474 159 SUPERFAMILY SSF109854 7 144 1.13E-16 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_11765 05a614a0882609f5aec86efd1a48e474 159 Gene3D G3DSA:1.20.120.450 2 157 2.6E-10 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_18390 6f669a7ab42fd8e25ff8904d89a9b079 309 SUPERFAMILY SSF52540 18 213 3.28E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_18390 6f669a7ab42fd8e25ff8904d89a9b079 309 TIGRFAM TIGR00436 era: GTP-binding protein Era 16 287 8.8E-110 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18390 6f669a7ab42fd8e25ff8904d89a9b079 309 Gene3D G3DSA:3.30.300.20 193 306 4.4E-45 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta N288_18390 6f669a7ab42fd8e25ff8904d89a9b079 309 Pfam PF01926 50S ribosome-binding GTPase 18 132 1.5E-24 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_18390 6f669a7ab42fd8e25ff8904d89a9b079 309 Pfam PF07650 KH domain 215 293 2.2E-23 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_18390 6f669a7ab42fd8e25ff8904d89a9b079 309 Gene3D G3DSA:3.40.50.300 10 192 2.0E-50 T 12-10-2018 N288_18390 6f669a7ab42fd8e25ff8904d89a9b079 309 SUPERFAMILY SSF54814 189 305 6.41E-43 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 N288_18390 6f669a7ab42fd8e25ff8904d89a9b079 309 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 18 38 5.4E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_18390 6f669a7ab42fd8e25ff8904d89a9b079 309 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 94 109 5.4E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_18390 6f669a7ab42fd8e25ff8904d89a9b079 309 Hamap MF_00367 GTPase Era [era]. 13 304 39.233 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18390 6f669a7ab42fd8e25ff8904d89a9b079 309 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 175 2.2E-30 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 N288_14475 9537404b1d0299328e2727d88006e3a4 258 SUPERFAMILY SSF54106 30 73 1.16E-11 T 12-10-2018 N288_14475 9537404b1d0299328e2727d88006e3a4 258 SUPERFAMILY SSF54106 76 117 1.01E-9 T 12-10-2018 N288_14475 9537404b1d0299328e2727d88006e3a4 258 Pfam PF01476 LysM domain 76 117 8.5E-12 T 12-10-2018 IPR018392 LysM domain N288_14475 9537404b1d0299328e2727d88006e3a4 258 Pfam PF01476 LysM domain 31 73 1.5E-13 T 12-10-2018 IPR018392 LysM domain N288_14475 9537404b1d0299328e2727d88006e3a4 258 Gene3D G3DSA:3.10.350.10 77 124 3.9E-17 T 12-10-2018 IPR036779 LysM domain superfamily N288_14475 9537404b1d0299328e2727d88006e3a4 258 Gene3D G3DSA:3.10.350.10 26 76 7.1E-18 T 12-10-2018 IPR036779 LysM domain superfamily N288_14475 9537404b1d0299328e2727d88006e3a4 258 SMART SM00257 75 118 2.3E-13 T 12-10-2018 IPR018392 LysM domain N288_14475 9537404b1d0299328e2727d88006e3a4 258 SMART SM00257 30 73 1.0E-14 T 12-10-2018 IPR018392 LysM domain N288_01745 e32e48e794854b5b3cd4b4709ded456d 226 Pfam PF01884 PcrB family 2 224 5.7E-83 T 12-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 N288_01745 e32e48e794854b5b3cd4b4709ded456d 226 SUPERFAMILY SSF51395 5 222 3.11E-53 T 12-10-2018 N288_01745 e32e48e794854b5b3cd4b4709ded456d 226 Gene3D G3DSA:3.20.20.390 1 226 1.0E-94 T 12-10-2018 IPR038597 GGGP/HepGP synthase superfamily N288_01745 e32e48e794854b5b3cd4b4709ded456d 226 TIGRFAM TIGR01768 GGGP-family: geranylgeranylglyceryl phosphate synthase family protein 8 223 8.3E-77 T 12-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 N288_01745 e32e48e794854b5b3cd4b4709ded456d 226 Hamap MF_00112 Geranylgeranylglyceryl phosphate synthase [pcrB]. 3 226 29.225 T 12-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 N288_02060 6086fc85c849112e5cf1da8caaac7929 387 SUPERFAMILY SSF69322 100 382 3.4E-6 T 12-10-2018 N288_02685 d1a08e4c8510690106fe9c9f43253898 316 Gene3D G3DSA:3.30.460.20 4 125 7.8E-32 T 12-10-2018 N288_02685 d1a08e4c8510690106fe9c9f43253898 316 Pfam PF01544 CorA-like Mg2+ transporter protein 29 311 3.4E-81 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 N288_02685 d1a08e4c8510690106fe9c9f43253898 316 SUPERFAMILY SSF144083 250 313 2.88E-24 T 12-10-2018 N288_02685 d1a08e4c8510690106fe9c9f43253898 316 Gene3D G3DSA:1.20.58.340 126 236 2.5E-26 T 12-10-2018 N288_02685 d1a08e4c8510690106fe9c9f43253898 316 Gene3D G3DSA:1.20.58.340 239 315 4.1E-33 T 12-10-2018 N288_02685 d1a08e4c8510690106fe9c9f43253898 316 SUPERFAMILY SSF143865 18 246 9.15E-59 T 12-10-2018 N288_02685 d1a08e4c8510690106fe9c9f43253898 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 315 4.3E-92 T 12-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 N288_09955 72d869abf2cb92aad6dec620e9fc3eea 123 Gene3D G3DSA:3.30.300.20 1 116 9.9E-41 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta N288_09955 72d869abf2cb92aad6dec620e9fc3eea 123 ProSitePatterns PS01319 Ribosome-binding factor A signature. 73 94 - T 12-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 N288_09955 72d869abf2cb92aad6dec620e9fc3eea 123 Pfam PF02033 Ribosome-binding factor A 4 107 2.5E-34 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 N288_09955 72d869abf2cb92aad6dec620e9fc3eea 123 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 2 112 5.8E-42 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 N288_09955 72d869abf2cb92aad6dec620e9fc3eea 123 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 7 94 2.0E-39 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 N288_09955 72d869abf2cb92aad6dec620e9fc3eea 123 SUPERFAMILY SSF89919 2 110 5.1E-37 T 12-10-2018 IPR023799 Ribosome-binding factor A domain superfamily N288_09955 72d869abf2cb92aad6dec620e9fc3eea 123 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 107 28.852 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 N288_19765 235a7a01f660cff8e9c4dab56aaa3bf6 166 Gene3D G3DSA:3.40.30.10 1 165 2.5E-49 T 12-10-2018 N288_19765 235a7a01f660cff8e9c4dab56aaa3bf6 166 Pfam PF08534 Redoxin 19 158 3.4E-23 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 N288_19765 235a7a01f660cff8e9c4dab56aaa3bf6 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 12-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 N288_19765 235a7a01f660cff8e9c4dab56aaa3bf6 166 Hamap MF_00269 Thiol peroxidase [tpx]. 3 163 38.769 T 12-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 N288_19765 235a7a01f660cff8e9c4dab56aaa3bf6 166 SUPERFAMILY SSF52833 1 160 3.26E-45 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_08800 51b4cc3786db96838fdc165ecf860d05 469 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 Gene3D G3DSA:3.50.50.60 152 272 2.2E-128 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_08800 51b4cc3786db96838fdc165ecf860d05 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 3.2E-42 T 12-10-2018 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 3.2E-42 T 12-10-2018 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 3.2E-42 T 12-10-2018 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 3.2E-42 T 12-10-2018 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 3.2E-42 T 12-10-2018 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 Gene3D G3DSA:3.30.390.30 347 467 1.7E-45 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 SUPERFAMILY SSF55424 345 467 4.64E-42 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 467 6.4E-179 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 Gene3D G3DSA:3.50.50.60 13 334 2.2E-128 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_08800 51b4cc3786db96838fdc165ecf860d05 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 7.5E-77 T 12-10-2018 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 7.5E-77 T 12-10-2018 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 7.5E-77 T 12-10-2018 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 7.5E-77 T 12-10-2018 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 7.5E-77 T 12-10-2018 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 7.5E-77 T 12-10-2018 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 7.5E-77 T 12-10-2018 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 7.5E-77 T 12-10-2018 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 7.5E-77 T 12-10-2018 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 329 4.1E-74 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 SUPERFAMILY SSF51905 7 339 1.05E-65 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_08800 51b4cc3786db96838fdc165ecf860d05 469 PIRSF PIRSF000350 3 458 7.6E-105 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 N288_08800 51b4cc3786db96838fdc165ecf860d05 469 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 1.9E-38 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 N288_12330 b0e37133b657d553aeb2bed13b6be9c8 169 SUPERFAMILY SSF55797 44 166 9.16E-30 T 12-10-2018 IPR035940 CAP superfamily N288_12330 b0e37133b657d553aeb2bed13b6be9c8 169 Gene3D G3DSA:3.40.33.10 6 167 3.7E-62 T 12-10-2018 IPR035940 CAP superfamily N288_12330 b0e37133b657d553aeb2bed13b6be9c8 169 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 44 168 8.4E-65 T 12-10-2018 IPR014258 CAP domain, YkwD-like N288_12330 b0e37133b657d553aeb2bed13b6be9c8 169 Pfam PF00188 Cysteine-rich secretory protein family 51 166 8.5E-22 T 12-10-2018 IPR014044 CAP domain N288_12330 b0e37133b657d553aeb2bed13b6be9c8 169 Pfam PF01476 LysM domain 2 37 4.2E-9 T 12-10-2018 IPR018392 LysM domain N288_12330 b0e37133b657d553aeb2bed13b6be9c8 169 SUPERFAMILY SSF54106 1 37 9.02E-6 T 12-10-2018 N288_21910 5ea42825cb5869fc82dcd6828e51e5fc 105 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 37 101 4.0E-13 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_21910 5ea42825cb5869fc82dcd6828e51e5fc 105 SUPERFAMILY SSF46626 3 103 6.92E-17 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 N288_21910 5ea42825cb5869fc82dcd6828e51e5fc 105 PIRSF PIRSF000025 1 105 9.1E-31 T 12-10-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 N288_21910 5ea42825cb5869fc82dcd6828e51e5fc 105 Gene3D G3DSA:1.10.760.10 36 105 9.9E-28 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 N288_19560 64b46f965db81380020a1414364c122b 275 Pfam PF06827 Zinc finger found in FPG and IleRS 246 273 3.0E-9 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 N288_19560 64b46f965db81380020a1414364c122b 275 ProSitePatterns PS01242 Zinc finger FPG-type signature. 249 273 - T 12-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 N288_19560 64b46f965db81380020a1414364c122b 275 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 134 223 2.8E-32 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 N288_19560 64b46f965db81380020a1414364c122b 275 SUPERFAMILY SSF57716 222 273 1.83E-16 T 12-10-2018 N288_19560 64b46f965db81380020a1414364c122b 275 SUPERFAMILY SSF81624 2 139 8.77E-43 T 12-10-2018 IPR035937 MutM-like, N-terminal N288_19560 64b46f965db81380020a1414364c122b 275 Gene3D G3DSA:1.10.8.50 136 275 4.5E-48 T 12-10-2018 N288_19560 64b46f965db81380020a1414364c122b 275 SMART SM00898 2 118 3.1E-51 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 N288_19560 64b46f965db81380020a1414364c122b 275 SUPERFAMILY SSF46946 134 223 2.09E-31 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 N288_19560 64b46f965db81380020a1414364c122b 275 SMART SM01232 134 226 2.5E-49 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 N288_19560 64b46f965db81380020a1414364c122b 275 Gene3D G3DSA:3.20.190.10 2 129 1.8E-42 T 12-10-2018 IPR035937 MutM-like, N-terminal N288_19560 64b46f965db81380020a1414364c122b 275 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 274 44.995 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 N288_19560 64b46f965db81380020a1414364c122b 275 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 117 3.9E-35 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 N288_19560 64b46f965db81380020a1414364c122b 275 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 273 2.4E-112 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 Gene3D G3DSA:1.10.601.10 3 104 7.2E-27 T 12-10-2018 N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 Pfam PF04545 Sigma-70, region 4 199 247 7.5E-16 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 31 250 2.1E-86 T 12-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 PRINTS PR00046 Major sigma-70 factor signature 220 235 4.7E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 PRINTS PR00046 Major sigma-70 factor signature 235 246 4.7E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 PRINTS PR00046 Major sigma-70 factor signature 85 93 4.7E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 PRINTS PR00046 Major sigma-70 factor signature 61 74 4.7E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 PRINTS PR00046 Major sigma-70 factor signature 203 215 4.7E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 Pfam PF04539 Sigma-70 region 3 117 180 1.4E-10 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 Gene3D G3DSA:1.10.10.10 105 161 2.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 SUPERFAMILY SSF88659 109 184 5.67E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 220 246 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 SUPERFAMILY SSF88946 6 105 1.44E-33 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 250 2.0E-36 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 Pfam PF04542 Sigma-70 region 2 38 104 2.5E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 61 74 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 SUPERFAMILY SSF88659 171 250 1.12E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 TIGRFAM TIGR02885 spore_sigF: RNA polymerase sigma-F factor 22 250 3.3E-113 T 12-10-2018 IPR014236 RNA polymerase sigma-F type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 Gene3D G3DSA:1.10.10.10 189 251 2.7E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_17425 1f8135730c2c41e4d7cbee1ac750e88a 252 PIRSF PIRSF000770 6 252 3.1E-34 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_05390 b6855e7b0206a8808d1d513dcfea84b6 226 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 18 115 4.4E-31 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 N288_05390 b6855e7b0206a8808d1d513dcfea84b6 226 SUPERFAMILY SSF161098 21 209 1.83E-47 T 12-10-2018 IPR035906 MetI-like superfamily N288_05390 b6855e7b0206a8808d1d513dcfea84b6 226 Gene3D G3DSA:1.10.3720.10 13 223 8.6E-57 T 12-10-2018 IPR035906 MetI-like superfamily N288_05390 b6855e7b0206a8808d1d513dcfea84b6 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 220 9.9E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_01120 11a25b70677d845722c6b97413ffe214 232 Gene3D G3DSA:3.30.240.20 173 231 1.5E-16 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily N288_01120 11a25b70677d845722c6b97413ffe214 232 Gene3D G3DSA:3.30.240.20 80 152 1.2E-23 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily N288_01120 11a25b70677d845722c6b97413ffe214 232 Pfam PF04239 Protein of unknown function (DUF421) 88 206 5.2E-30 T 12-10-2018 IPR007353 Protein of unknown function DUF421 N288_20315 0bf1ba4c73e0b5373af8228d59287527 155 PRINTS PR00502 NUDIX hydrolase family signature 62 77 1.8E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_20315 0bf1ba4c73e0b5373af8228d59287527 155 PRINTS PR00502 NUDIX hydrolase family signature 48 62 1.8E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_20315 0bf1ba4c73e0b5373af8228d59287527 155 SUPERFAMILY SSF55811 28 122 1.31E-20 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_20315 0bf1ba4c73e0b5373af8228d59287527 155 TIGRFAM TIGR02705 nudix_YtkD: nucleoside triphosphatase YtkD 3 153 1.3E-57 T 12-10-2018 IPR014078 Nucleoside triphosphatase YtkD MetaCyc: PWY-6502 N288_20315 0bf1ba4c73e0b5373af8228d59287527 155 Pfam PF00293 NUDIX domain 26 86 9.5E-15 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_20315 0bf1ba4c73e0b5373af8228d59287527 155 ProSitePatterns PS00893 Nudix box signature. 53 74 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_20315 0bf1ba4c73e0b5373af8228d59287527 155 Gene3D G3DSA:3.90.79.10 1 154 1.3E-38 T 12-10-2018 N288_11750 d77f75b374a7b9e58f5d340421ae37d4 378 Pfam PF00512 His Kinase A (phospho-acceptor) domain 146 204 2.6E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_11750 d77f75b374a7b9e58f5d340421ae37d4 378 SUPERFAMILY SSF47384 137 211 1.45E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_11750 d77f75b374a7b9e58f5d340421ae37d4 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 320 1.1E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_11750 d77f75b374a7b9e58f5d340421ae37d4 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 358 1.1E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_11750 d77f75b374a7b9e58f5d340421ae37d4 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 306 1.1E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_11750 d77f75b374a7b9e58f5d340421ae37d4 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 339 1.1E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_11750 d77f75b374a7b9e58f5d340421ae37d4 378 SUPERFAMILY SSF55874 211 359 4.85E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_11750 d77f75b374a7b9e58f5d340421ae37d4 378 SMART SM00387 252 361 5.8E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_11750 d77f75b374a7b9e58f5d340421ae37d4 378 SMART SM00388 145 210 2.5E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_11750 d77f75b374a7b9e58f5d340421ae37d4 378 Gene3D G3DSA:1.10.287.130 119 208 1.8E-15 T 12-10-2018 N288_11750 d77f75b374a7b9e58f5d340421ae37d4 378 Gene3D G3DSA:3.30.565.10 209 369 5.4E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_11750 d77f75b374a7b9e58f5d340421ae37d4 378 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 254 359 1.5E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_21720 f54be4a2346c3ddd5f2ad455730ef5ae 177 SUPERFAMILY SSF51161 11 160 2.5E-33 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily N288_21720 f54be4a2346c3ddd5f2ad455730ef5ae 177 Gene3D G3DSA:2.160.10.10 25 170 8.0E-29 T 12-10-2018 N288_21720 f54be4a2346c3ddd5f2ad455730ef5ae 177 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 107 139 3.6E-9 T 12-10-2018 IPR001451 Hexapeptide repeat N288_21950 1e98e5b7c2d0b86274114924d2417982 640 Pfam PF02810 SEC-C motif 16 33 3.8E-9 T 12-10-2018 IPR004027 SEC-C motif N288_21950 1e98e5b7c2d0b86274114924d2417982 640 Pfam PF14559 Tetratricopeptide repeat 501 554 5.3E-8 T 12-10-2018 N288_21950 1e98e5b7c2d0b86274114924d2417982 640 SUPERFAMILY SSF103642 14 35 1.62E-7 T 12-10-2018 N288_21950 1e98e5b7c2d0b86274114924d2417982 640 Gene3D G3DSA:1.25.40.10 401 635 1.5E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_21950 1e98e5b7c2d0b86274114924d2417982 640 SUPERFAMILY SSF48452 403 549 9.1E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_21950 1e98e5b7c2d0b86274114924d2417982 640 Gene3D G3DSA:3.10.450.50 3 35 1.9E-7 T 12-10-2018 N288_00765 be711d89029db642009edbcba121f347 92 Gene3D G3DSA:3.30.860.10 1 92 1.1E-39 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00765 be711d89029db642009edbcba121f347 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 9.9E-47 T 12-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 N288_00765 be711d89029db642009edbcba121f347 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 4.4E-24 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00765 be711d89029db642009edbcba121f347 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 4.4E-24 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00765 be711d89029db642009edbcba121f347 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 4.4E-24 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00765 be711d89029db642009edbcba121f347 92 Pfam PF00203 Ribosomal protein S19 3 83 2.2E-35 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00765 be711d89029db642009edbcba121f347 92 PIRSF PIRSF002144 1 92 2.0E-31 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00765 be711d89029db642009edbcba121f347 92 SUPERFAMILY SSF54570 3 84 7.06E-35 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00765 be711d89029db642009edbcba121f347 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 12-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00765 be711d89029db642009edbcba121f347 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.374 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_24050 db0f9548639348506b51783889d4df23 247 Gene3D G3DSA:3.30.70.1030 1 136 3.1E-55 T 12-10-2018 N288_24050 db0f9548639348506b51783889d4df23 247 SUPERFAMILY SSF54909 2 246 1.1E-96 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel N288_24050 db0f9548639348506b51783889d4df23 247 Pfam PF06778 Chlorite dismutase 33 235 1.1E-79 T 12-10-2018 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase N288_24050 db0f9548639348506b51783889d4df23 247 Hamap MF_01442 Putative heme-dependent peroxidase . 1 247 56.92 T 12-10-2018 IPR031332 Putative heme-dependent peroxidase, UPF0447 family N288_24050 db0f9548639348506b51783889d4df23 247 Gene3D G3DSA:3.30.70.1100 137 247 1.7E-48 T 12-10-2018 N288_21215 99807b6b07e8e5a606db39d2809092bb 794 Gene3D G3DSA:3.90.226.10 485 682 3.0E-27 T 12-10-2018 N288_21215 99807b6b07e8e5a606db39d2809092bb 794 Gene3D G3DSA:1.10.1040.10 209 329 1.9E-19 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 N288_21215 99807b6b07e8e5a606db39d2809092bb 794 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 208 306 7.5E-11 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 N288_21215 99807b6b07e8e5a606db39d2809092bb 794 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 366 418 1.1E-5 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 N288_21215 99807b6b07e8e5a606db39d2809092bb 794 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 205 1.2E-45 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 N288_21215 99807b6b07e8e5a606db39d2809092bb 794 SUPERFAMILY SSF48179 357 449 1.02E-18 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_21215 99807b6b07e8e5a606db39d2809092bb 794 Pfam PF00378 Enoyl-CoA hydratase/isomerase 488 622 1.3E-8 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 N288_21215 99807b6b07e8e5a606db39d2809092bb 794 Gene3D G3DSA:3.40.50.720 2 208 4.4E-66 T 12-10-2018 N288_21215 99807b6b07e8e5a606db39d2809092bb 794 Gene3D G3DSA:1.10.1040.10 364 438 2.8E-8 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 N288_21215 99807b6b07e8e5a606db39d2809092bb 794 SUPERFAMILY SSF48179 206 327 1.45E-22 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_21215 99807b6b07e8e5a606db39d2809092bb 794 SUPERFAMILY SSF52096 481 791 2.02E-36 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_21215 99807b6b07e8e5a606db39d2809092bb 794 SUPERFAMILY SSF51735 4 206 3.11E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_15200 ae2a26dc9c3d0b6402a04fa212a522d2 191 Pfam PF04167 Protein of unknown function (DUF402) 62 129 4.3E-20 T 12-10-2018 IPR007295 Domain of unknown function DUF402 N288_15200 ae2a26dc9c3d0b6402a04fa212a522d2 191 Gene3D G3DSA:2.40.380.10 39 171 8.1E-15 T 12-10-2018 IPR035930 FomD-like superfamily N288_15200 ae2a26dc9c3d0b6402a04fa212a522d2 191 SUPERFAMILY SSF159234 9 169 1.44E-37 T 12-10-2018 IPR035930 FomD-like superfamily N288_21820 d44c3388a28a3e9a4b97023cc14fab93 276 Gene3D G3DSA:3.40.190.10 110 220 3.8E-95 T 12-10-2018 N288_21820 d44c3388a28a3e9a4b97023cc14fab93 276 PIRSF PIRSF002854 1 269 6.7E-90 T 12-10-2018 IPR004872 Lipoprotein NlpA family N288_21820 d44c3388a28a3e9a4b97023cc14fab93 276 Pfam PF03180 NLPA lipoprotein 33 268 6.4E-84 T 12-10-2018 IPR004872 Lipoprotein NlpA family N288_21820 d44c3388a28a3e9a4b97023cc14fab93 276 SUPERFAMILY SSF53850 32 268 2.86E-81 T 12-10-2018 N288_21820 d44c3388a28a3e9a4b97023cc14fab93 276 Gene3D G3DSA:3.40.190.10 34 259 3.8E-95 T 12-10-2018 N288_24665 56d3198ffa06ccf3be7606b914208ad0 253 Pfam PF00106 short chain dehydrogenase 6 192 4.1E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24665 56d3198ffa06ccf3be7606b914208ad0 253 Gene3D G3DSA:3.40.50.720 1 252 2.1E-48 T 12-10-2018 N288_24665 56d3198ffa06ccf3be7606b914208ad0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.3E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24665 56d3198ffa06ccf3be7606b914208ad0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.3E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24665 56d3198ffa06ccf3be7606b914208ad0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.3E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24665 56d3198ffa06ccf3be7606b914208ad0 253 SUPERFAMILY SSF51735 1 198 7.16E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_24665 56d3198ffa06ccf3be7606b914208ad0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.2E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24665 56d3198ffa06ccf3be7606b914208ad0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.2E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24665 56d3198ffa06ccf3be7606b914208ad0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.2E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24665 56d3198ffa06ccf3be7606b914208ad0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.2E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24665 56d3198ffa06ccf3be7606b914208ad0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.2E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13685 93b603aa5b81819b695adcc5c37180f3 435 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 202 293 7.3E-39 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 N288_13685 93b603aa5b81819b695adcc5c37180f3 435 PIRSF PIRSF000124 1 432 1.6E-135 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 N288_13685 93b603aa5b81819b695adcc5c37180f3 435 PIRSF PIRSF500134 1 435 4.6E-158 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 N288_13685 93b603aa5b81819b695adcc5c37180f3 435 Gene3D G3DSA:1.20.5.100 201 231 1.2E-17 T 12-10-2018 N288_13685 93b603aa5b81819b695adcc5c37180f3 435 SUPERFAMILY SSF48179 201 298 1.29E-32 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_13685 93b603aa5b81819b695adcc5c37180f3 435 SUPERFAMILY SSF51735 1 191 2.19E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_13685 93b603aa5b81819b695adcc5c37180f3 435 SUPERFAMILY SSF52413 303 427 2.09E-32 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 N288_13685 93b603aa5b81819b695adcc5c37180f3 435 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 316 417 9.0E-26 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 N288_13685 93b603aa5b81819b695adcc5c37180f3 435 Gene3D G3DSA:3.40.50.720 232 434 9.7E-69 T 12-10-2018 N288_13685 93b603aa5b81819b695adcc5c37180f3 435 Gene3D G3DSA:3.40.50.720 1 200 2.6E-71 T 12-10-2018 N288_13685 93b603aa5b81819b695adcc5c37180f3 435 SMART SM00984 316 417 8.8E-36 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 N288_13685 93b603aa5b81819b695adcc5c37180f3 435 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 4.1E-58 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 N288_13685 93b603aa5b81819b695adcc5c37180f3 435 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 413 3.7E-133 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 N288_08460 aff946700727f6c98bad8e362a774c40 529 SUPERFAMILY SSF47384 303 373 6.08E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_08460 aff946700727f6c98bad8e362a774c40 529 SMART SM00388 310 373 1.6E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_08460 aff946700727f6c98bad8e362a774c40 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 519 1.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_08460 aff946700727f6c98bad8e362a774c40 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 500 1.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_08460 aff946700727f6c98bad8e362a774c40 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 481 1.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_08460 aff946700727f6c98bad8e362a774c40 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 467 1.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_08460 aff946700727f6c98bad8e362a774c40 529 Gene3D G3DSA:3.30.450.20 169 307 1.4E-13 T 12-10-2018 N288_08460 aff946700727f6c98bad8e362a774c40 529 SUPERFAMILY SSF55785 173 292 4.0E-8 T 12-10-2018 IPR035965 PAS domain superfamily N288_08460 aff946700727f6c98bad8e362a774c40 529 SMART SM00387 415 522 4.0E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_08460 aff946700727f6c98bad8e362a774c40 529 Pfam PF00512 His Kinase A (phospho-acceptor) domain 312 370 9.3E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_08460 aff946700727f6c98bad8e362a774c40 529 Gene3D G3DSA:3.30.565.10 373 528 8.3E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_08460 aff946700727f6c98bad8e362a774c40 529 Gene3D G3DSA:1.10.287.130 313 370 1.1E-19 T 12-10-2018 N288_08460 aff946700727f6c98bad8e362a774c40 529 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 416 520 4.8E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_08460 aff946700727f6c98bad8e362a774c40 529 SUPERFAMILY SSF55874 362 521 1.57E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_00200 931720a9e5ed5b5659f31268f4e63245 502 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 24 309 1.3E-67 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 N288_00200 931720a9e5ed5b5659f31268f4e63245 502 Gene3D G3DSA:3.90.100.10 391 496 6.1E-19 T 12-10-2018 N288_00200 931720a9e5ed5b5659f31268f4e63245 502 SUPERFAMILY SSF55904 346 480 6.28E-24 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 N288_00200 931720a9e5ed5b5659f31268f4e63245 502 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 405 475 6.5E-12 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 N288_00200 931720a9e5ed5b5659f31268f4e63245 502 Gene3D G3DSA:3.40.640.10 64 293 2.2E-109 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_00200 931720a9e5ed5b5659f31268f4e63245 502 SUPERFAMILY SSF53383 24 370 1.06E-80 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_00200 931720a9e5ed5b5659f31268f4e63245 502 Gene3D G3DSA:3.90.1150.150 297 383 2.2E-109 T 12-10-2018 N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 2.5E-16 T 12-10-2018 IPR004176 Clp, N-terminal N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 143 2.0E-18 T 12-10-2018 IPR004176 Clp, N-terminal N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 317 1.8E-13 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 571 589 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 Gene3D G3DSA:1.10.8.60 714 810 3.5E-28 T 12-10-2018 N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 Gene3D G3DSA:3.40.50.300 490 712 1.1E-91 T 12-10-2018 N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 SMART SM00382 537 779 1.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 SMART SM00382 200 345 1.9E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 SUPERFAMILY SSF52540 486 802 5.4E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 SMART SM01086 714 803 1.4E-37 T 12-10-2018 IPR019489 Clp ATPase, C-terminal N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 SUPERFAMILY SSF81923 5 146 2.98E-32 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 1.2E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 541 559 1.2E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 662 1.2E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 586 604 1.2E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 Gene3D G3DSA:3.40.50.300 151 343 2.7E-72 T 12-10-2018 N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 SUPERFAMILY SSF52540 161 467 4.81E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 Gene3D G3DSA:1.10.8.60 346 481 9.8E-54 T 12-10-2018 N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 Pfam PF02151 UvrB/uvrC motif 419 452 1.1E-6 T 12-10-2018 IPR001943 UVR domain GO:0005515 N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 714 793 1.1E-25 T 12-10-2018 IPR019489 Clp ATPase, C-terminal N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 Pfam PF07724 AAA domain (Cdc48 subfamily) 536 708 1.7E-58 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 Gene3D G3DSA:1.10.1780.10 1 150 3.8E-62 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 Gene3D G3DSA:4.10.860.10 409 467 9.8E-54 T 12-10-2018 N288_00600 433e185a1124dc74a36d00d2a198a7a0 817 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 N288_01990 3a1d6fef4bcfcef9f536311ac8a2e57c 296 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site N288_01990 3a1d6fef4bcfcef9f536311ac8a2e57c 296 Gene3D G3DSA:1.10.357.10 1 183 5.7E-27 T 12-10-2018 N288_01990 3a1d6fef4bcfcef9f536311ac8a2e57c 296 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 6.6E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_01990 3a1d6fef4bcfcef9f536311ac8a2e57c 296 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.7E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_01990 3a1d6fef4bcfcef9f536311ac8a2e57c 296 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.7E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_01990 3a1d6fef4bcfcef9f536311ac8a2e57c 296 SUPERFAMILY SSF46689 3 66 3.44E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_08005 b926012b667c3e705f05893a9fdfbece 673 Gene3D G3DSA:3.30.70.270 238 413 4.8E-57 T 12-10-2018 N288_08005 b926012b667c3e705f05893a9fdfbece 673 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 240 399 3.3E-41 T 12-10-2018 IPR000160 GGDEF domain N288_08005 b926012b667c3e705f05893a9fdfbece 673 SMART SM00052 410 656 8.2E-102 T 12-10-2018 IPR001633 EAL domain N288_08005 b926012b667c3e705f05893a9fdfbece 673 SUPERFAMILY SSF55073 249 400 4.63E-45 T 12-10-2018 IPR029787 Nucleotide cyclase N288_08005 b926012b667c3e705f05893a9fdfbece 673 Pfam PF00563 EAL domain 416 651 3.9E-67 T 12-10-2018 IPR001633 EAL domain N288_08005 b926012b667c3e705f05893a9fdfbece 673 SUPERFAMILY SSF141868 416 661 2.48E-84 T 12-10-2018 IPR035919 EAL domain superfamily N288_08005 b926012b667c3e705f05893a9fdfbece 673 SMART SM00267 233 400 1.2E-56 T 12-10-2018 IPR000160 GGDEF domain N288_08005 b926012b667c3e705f05893a9fdfbece 673 Gene3D G3DSA:3.20.20.450 414 663 3.6E-94 T 12-10-2018 IPR035919 EAL domain superfamily N288_08005 b926012b667c3e705f05893a9fdfbece 673 Pfam PF00990 Diguanylate cyclase, GGDEF domain 244 396 4.2E-44 T 12-10-2018 IPR000160 GGDEF domain N288_15210 d2a57390d94a8923a0809d8855c9b24e 349 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 302 317 6.5E-5 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_15210 d2a57390d94a8923a0809d8855c9b24e 349 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 270 285 6.5E-5 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_15210 d2a57390d94a8923a0809d8855c9b24e 349 Gene3D G3DSA:1.10.10.10 267 334 1.2E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_15210 d2a57390d94a8923a0809d8855c9b24e 349 SUPERFAMILY SSF46785 268 345 5.45E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_15210 d2a57390d94a8923a0809d8855c9b24e 349 Pfam PF01022 Bacterial regulatory protein, arsR family 276 319 5.4E-10 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_15210 d2a57390d94a8923a0809d8855c9b24e 349 SMART SM00418 268 342 3.1E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_00940 c55cc6acc2a3bedf9ec0c2ec8479f206 348 Pfam PF01883 Iron-sulfur cluster assembly protein 4 49 5.2E-5 T 12-10-2018 IPR002744 MIP18 family-like N288_00940 c55cc6acc2a3bedf9ec0c2ec8479f206 348 Gene3D G3DSA:3.40.50.300 101 323 1.1E-64 T 12-10-2018 N288_00940 c55cc6acc2a3bedf9ec0c2ec8479f206 348 Hamap MF_02040 Iron-sulfur cluster carrier protein. 97 345 33.62 T 12-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein N288_00940 c55cc6acc2a3bedf9ec0c2ec8479f206 348 ProSitePatterns PS01215 Mrp family signature. 210 226 - T 12-10-2018 IPR000808 Mrp, conserved site GO:0005524 N288_00940 c55cc6acc2a3bedf9ec0c2ec8479f206 348 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 107 344 8.2E-83 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 N288_00940 c55cc6acc2a3bedf9ec0c2ec8479f206 348 SUPERFAMILY SSF117916 1 77 1.34E-6 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily N288_00940 c55cc6acc2a3bedf9ec0c2ec8479f206 348 Gene3D G3DSA:3.30.300.130 1 96 1.3E-5 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily N288_00940 c55cc6acc2a3bedf9ec0c2ec8479f206 348 SUPERFAMILY SSF52540 107 346 2.05E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_15425 fab5402c22beeb6d6cd7fabc271a5a6d 282 SUPERFAMILY SSF63992 1 272 4.58E-82 T 12-10-2018 IPR036177 Peptidase M55, D-aminopeptidase superfamily N288_15425 fab5402c22beeb6d6cd7fabc271a5a6d 282 Pfam PF04951 D-aminopeptidase 1 262 1.2E-93 T 12-10-2018 IPR007035 Peptidase M55, D-aminopeptidase N288_15425 fab5402c22beeb6d6cd7fabc271a5a6d 282 Gene3D G3DSA:3.40.50.10780 1 215 1.1E-93 T 12-10-2018 IPR027476 D-aminopeptidase, N-terminal N288_15425 fab5402c22beeb6d6cd7fabc271a5a6d 282 Gene3D G3DSA:3.30.1360.130 119 261 1.1E-93 T 12-10-2018 N288_15425 fab5402c22beeb6d6cd7fabc271a5a6d 282 PIRSF PIRSF015853 1 275 2.7E-84 T 12-10-2018 IPR007035 Peptidase M55, D-aminopeptidase N288_22070 6c71f11eeb89b4825062e19750f1b4e3 239 Gene3D G3DSA:3.40.50.2020 114 239 9.5E-15 T 12-10-2018 N288_22070 6c71f11eeb89b4825062e19750f1b4e3 239 SUPERFAMILY SSF53271 92 237 1.57E-21 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like N288_07565 28d1c34cd19f66bac7c8386a004a876c 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site N288_07565 28d1c34cd19f66bac7c8386a004a876c 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 9.0E-41 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal N288_07565 28d1c34cd19f66bac7c8386a004a876c 413 Gene3D G3DSA:3.40.47.10 1 254 6.5E-105 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_07565 28d1c34cd19f66bac7c8386a004a876c 413 PIRSF PIRSF000447 1 413 3.9E-188 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 N288_07565 28d1c34cd19f66bac7c8386a004a876c 413 SMART SM00825 Beta-ketoacyl synthase 6 413 4.0E-17 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain N288_07565 28d1c34cd19f66bac7c8386a004a876c 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 409 1.0E-202 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 N288_07565 28d1c34cd19f66bac7c8386a004a876c 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 246 2.1E-60 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal N288_07565 28d1c34cd19f66bac7c8386a004a876c 413 Gene3D G3DSA:3.40.47.10 256 400 5.7E-59 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_07565 28d1c34cd19f66bac7c8386a004a876c 413 SUPERFAMILY SSF53901 214 411 6.47E-79 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_07565 28d1c34cd19f66bac7c8386a004a876c 413 SUPERFAMILY SSF53901 3 251 3.91E-77 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_01700 008ceb9ef7d2cdfdf3234fa9498c172e 342 Pfam PF02769 AIR synthase related protein, C-terminal domain 173 341 1.7E-35 T 12-10-2018 IPR010918 PurM-like, C-terminal domain N288_01700 008ceb9ef7d2cdfdf3234fa9498c172e 342 Gene3D G3DSA:3.90.650.10 168 342 6.7E-69 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily N288_01700 008ceb9ef7d2cdfdf3234fa9498c172e 342 SUPERFAMILY SSF56042 168 340 7.18E-58 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily N288_01700 008ceb9ef7d2cdfdf3234fa9498c172e 342 Gene3D G3DSA:3.30.1330.10 1 167 2.9E-70 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily N288_01700 008ceb9ef7d2cdfdf3234fa9498c172e 342 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 159 2.1E-17 T 12-10-2018 IPR016188 PurM-like, N-terminal domain N288_01700 008ceb9ef7d2cdfdf3234fa9498c172e 342 SUPERFAMILY SSF55326 3 166 3.89E-52 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily N288_01700 008ceb9ef7d2cdfdf3234fa9498c172e 342 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 334 3.6E-140 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 N288_01700 008ceb9ef7d2cdfdf3234fa9498c172e 342 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 3 342 47.586 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 N288_19055 5796a46308335f69f55f6ff20f5b5796 229 SUPERFAMILY SSF47781 20 95 3.02E-7 T 12-10-2018 IPR010994 RuvA domain 2-like N288_19055 5796a46308335f69f55f6ff20f5b5796 229 Gene3D G3DSA:3.40.140.10 105 229 2.4E-48 T 12-10-2018 N288_19055 5796a46308335f69f55f6ff20f5b5796 229 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 178 183 - T 12-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site N288_19055 5796a46308335f69f55f6ff20f5b5796 229 SUPERFAMILY SSF102712 159 202 2.35E-5 T 12-10-2018 N288_19055 5796a46308335f69f55f6ff20f5b5796 229 TIGRFAM TIGR00608 radc: DNA repair protein RadC 16 229 7.7E-86 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 N288_19055 5796a46308335f69f55f6ff20f5b5796 229 Pfam PF04002 RadC-like JAB domain 108 227 3.4E-48 T 12-10-2018 IPR025657 RadC-like JAB domain N288_19055 5796a46308335f69f55f6ff20f5b5796 229 Gene3D G3DSA:1.10.150.20 52 92 1.2E-5 T 12-10-2018 N288_03620 cdd65babc2e9347e3821c6673a9a37cc 400 Gene3D G3DSA:1.20.1250.20 3 381 2.2E-65 T 12-10-2018 N288_03620 cdd65babc2e9347e3821c6673a9a37cc 400 SUPERFAMILY SSF103473 1 392 9.16E-70 T 12-10-2018 IPR036259 MFS transporter superfamily N288_03620 cdd65babc2e9347e3821c6673a9a37cc 400 Pfam PF07690 Major Facilitator Superfamily 15 240 4.9E-40 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_03620 cdd65babc2e9347e3821c6673a9a37cc 400 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_23635 c1a4373da1aee0548a14b141b9f5bec3 504 Pfam PF00361 Proton-conducting membrane transporter 131 434 3.2E-68 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23635 c1a4373da1aee0548a14b141b9f5bec3 504 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 11 488 1.1E-114 T 12-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 N288_23635 c1a4373da1aee0548a14b141b9f5bec3 504 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 9 489 17.304 T 12-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 N288_20370 f0961989aab7fdb735a2f4edf62f9271 330 PRINTS PR00691 Adhesin B signature 307 325 6.3E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 N288_20370 f0961989aab7fdb735a2f4edf62f9271 330 PRINTS PR00691 Adhesin B signature 80 99 6.3E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 N288_20370 f0961989aab7fdb735a2f4edf62f9271 330 PRINTS PR00691 Adhesin B signature 61 79 6.3E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 N288_20370 f0961989aab7fdb735a2f4edf62f9271 330 PRINTS PR00691 Adhesin B signature 36 57 6.3E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 N288_20370 f0961989aab7fdb735a2f4edf62f9271 330 Gene3D G3DSA:3.40.50.1980 217 330 3.2E-40 T 12-10-2018 N288_20370 f0961989aab7fdb735a2f4edf62f9271 330 SUPERFAMILY SSF53807 36 328 2.26E-80 T 12-10-2018 N288_20370 f0961989aab7fdb735a2f4edf62f9271 330 Gene3D G3DSA:3.40.50.1980 25 215 6.2E-54 T 12-10-2018 N288_20370 f0961989aab7fdb735a2f4edf62f9271 330 Pfam PF01297 Zinc-uptake complex component A periplasmic 39 327 3.4E-71 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 N288_20370 f0961989aab7fdb735a2f4edf62f9271 330 PRINTS PR00690 Adhesin family signature 80 97 3.2E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 N288_20370 f0961989aab7fdb735a2f4edf62f9271 330 PRINTS PR00690 Adhesin family signature 36 54 3.2E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 N288_20370 f0961989aab7fdb735a2f4edf62f9271 330 PRINTS PR00690 Adhesin family signature 267 285 3.2E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 N288_20370 f0961989aab7fdb735a2f4edf62f9271 330 PRINTS PR00690 Adhesin family signature 67 80 3.2E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 N288_10380 90c5be1f88788b5b4d98fa8ae2577de1 587 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_10380 90c5be1f88788b5b4d98fa8ae2577de1 587 Pfam PF00005 ABC transporter 353 500 1.8E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_10380 90c5be1f88788b5b4d98fa8ae2577de1 587 SMART SM00382 362 554 4.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_10380 90c5be1f88788b5b4d98fa8ae2577de1 587 SUPERFAMILY SSF52540 328 572 1.41E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_10380 90c5be1f88788b5b4d98fa8ae2577de1 587 Pfam PF00664 ABC transporter transmembrane region 21 291 1.9E-46 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 N288_10380 90c5be1f88788b5b4d98fa8ae2577de1 587 SUPERFAMILY SSF90123 7 320 1.83E-74 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_10380 90c5be1f88788b5b4d98fa8ae2577de1 587 Gene3D G3DSA:1.20.1560.10 4 319 7.0E-81 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_10380 90c5be1f88788b5b4d98fa8ae2577de1 587 Gene3D G3DSA:3.40.50.300 332 582 4.1E-80 T 12-10-2018 N288_12800 6f8a73aafc22f0b36a7d9838c28c0dd2 151 SUPERFAMILY SSF55811 4 127 8.67E-21 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_12800 6f8a73aafc22f0b36a7d9838c28c0dd2 151 Pfam PF00293 NUDIX domain 14 123 1.2E-9 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_12800 6f8a73aafc22f0b36a7d9838c28c0dd2 151 Gene3D G3DSA:3.90.79.10 1 147 2.3E-22 T 12-10-2018 N288_21180 9a5e897eb4a93ff04b706f1ff75af700 118 Gene3D G3DSA:3.40.1360.20 3 118 9.2E-45 T 12-10-2018 N288_21180 9a5e897eb4a93ff04b706f1ff75af700 118 SMART SM00493 7 81 3.7E-5 T 12-10-2018 IPR006171 TOPRIM domain N288_21180 9a5e897eb4a93ff04b706f1ff75af700 118 SUPERFAMILY SSF110455 5 112 2.75E-34 T 12-10-2018 N288_17090 fe2ebc3094d176ed2ea00292c6123c06 350 Gene3D G3DSA:1.10.1040.10 194 341 2.3E-55 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 N288_17090 fe2ebc3094d176ed2ea00292c6123c06 350 SUPERFAMILY SSF48179 185 337 9.52E-60 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_17090 fe2ebc3094d176ed2ea00292c6123c06 350 PIRSF PIRSF000114 1 337 3.1E-114 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 N288_17090 fe2ebc3094d176ed2ea00292c6123c06 350 Gene3D G3DSA:3.40.50.720 1 192 1.6E-65 T 12-10-2018 N288_17090 fe2ebc3094d176ed2ea00292c6123c06 350 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 327 39.005 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 N288_17090 fe2ebc3094d176ed2ea00292c6123c06 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 243 260 6.7E-48 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 N288_17090 fe2ebc3094d176ed2ea00292c6123c06 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 138 158 6.7E-48 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 N288_17090 fe2ebc3094d176ed2ea00292c6123c06 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 6.7E-48 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 N288_17090 fe2ebc3094d176ed2ea00292c6123c06 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 178 202 6.7E-48 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 N288_17090 fe2ebc3094d176ed2ea00292c6123c06 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 6.7E-48 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 N288_17090 fe2ebc3094d176ed2ea00292c6123c06 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 203 227 6.7E-48 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 N288_17090 fe2ebc3094d176ed2ea00292c6123c06 350 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 185 325 6.9E-57 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 N288_17090 fe2ebc3094d176ed2ea00292c6123c06 350 SUPERFAMILY SSF51735 7 183 3.31E-58 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_17090 fe2ebc3094d176ed2ea00292c6123c06 350 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 165 3.4E-53 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 N288_17090 fe2ebc3094d176ed2ea00292c6123c06 350 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 193 214 - T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 N288_14700 5b2d9bb9fd4969abfcf27cbaeac62b18 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 172 2.2E-36 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_14700 5b2d9bb9fd4969abfcf27cbaeac62b18 188 SUPERFAMILY SSF88659 107 174 2.24E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_14700 5b2d9bb9fd4969abfcf27cbaeac62b18 188 Gene3D G3DSA:1.10.1740.10 2 116 2.4E-30 T 12-10-2018 N288_14700 5b2d9bb9fd4969abfcf27cbaeac62b18 188 Gene3D G3DSA:1.10.10.10 117 178 5.3E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_14700 5b2d9bb9fd4969abfcf27cbaeac62b18 188 Pfam PF08281 Sigma-70, region 4 118 170 4.4E-18 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_14700 5b2d9bb9fd4969abfcf27cbaeac62b18 188 SUPERFAMILY SSF88946 3 94 7.69E-27 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_14700 5b2d9bb9fd4969abfcf27cbaeac62b18 188 Pfam PF04542 Sigma-70 region 2 23 89 7.7E-19 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_14700 5b2d9bb9fd4969abfcf27cbaeac62b18 188 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 44 75 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_16020 5dbacac037b73a19ff5b7be49e2783ef 503 SMART SM00471 326 464 1.8E-11 T 12-10-2018 IPR003607 HD/PDEase domain N288_16020 5dbacac037b73a19ff5b7be49e2783ef 503 SUPERFAMILY SSF109604 319 494 2.34E-41 T 12-10-2018 N288_16020 5dbacac037b73a19ff5b7be49e2783ef 503 Gene3D G3DSA:1.10.3210.10 304 502 2.4E-73 T 12-10-2018 N288_16020 5dbacac037b73a19ff5b7be49e2783ef 503 Pfam PF01966 HD domain 332 455 5.5E-20 T 12-10-2018 IPR006674 HD domain N288_06500 8c261f92bdfe16b63320bee330765cf7 148 Pfam PF12844 Helix-turn-helix domain 5 54 5.0E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_06500 8c261f92bdfe16b63320bee330765cf7 148 SUPERFAMILY SSF47413 1 61 1.29E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_06500 8c261f92bdfe16b63320bee330765cf7 148 Gene3D G3DSA:1.10.260.40 1 74 9.0E-11 T 12-10-2018 N288_06500 8c261f92bdfe16b63320bee330765cf7 148 SMART SM00530 6 61 2.1E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_00205 5d88a5ebe06e2d1fd4d1bc639539b36e 211 Pfam PF02223 Thymidylate kinase 10 198 1.6E-55 T 12-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 N288_00205 5d88a5ebe06e2d1fd4d1bc639539b36e 211 Gene3D G3DSA:3.40.50.300 1 209 4.0E-65 T 12-10-2018 N288_00205 5d88a5ebe06e2d1fd4d1bc639539b36e 211 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 12-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 N288_00205 5d88a5ebe06e2d1fd4d1bc639539b36e 211 Hamap MF_00165 Thymidylate kinase [tmk]. 5 208 30.79 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 N288_00205 5d88a5ebe06e2d1fd4d1bc639539b36e 211 SUPERFAMILY SSF52540 1 199 4.61E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00205 5d88a5ebe06e2d1fd4d1bc639539b36e 211 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 198 2.1E-62 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 N288_13875 202bb2fdd940f265a01a8352eea55b51 446 Pfam PF05525 Branched-chain amino acid transport protein 10 432 4.2E-158 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 N288_13875 202bb2fdd940f265a01a8352eea55b51 446 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 420 3.7E-149 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 N288_01775 4b0f401fa9cb5a9a8cadc5ec2e471363 527 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 195 220 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site N288_01775 4b0f401fa9cb5a9a8cadc5ec2e471363 527 Pfam PF00474 Sodium:solute symporter family 73 469 3.8E-117 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 N288_01775 4b0f401fa9cb5a9a8cadc5ec2e471363 527 Gene3D G3DSA:1.20.1730.10 61 526 2.6E-104 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily N288_01775 4b0f401fa9cb5a9a8cadc5ec2e471363 527 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 73 469 3.5E-105 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 N288_01775 4b0f401fa9cb5a9a8cadc5ec2e471363 527 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 44 523 2.4E-226 T 12-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 Pfam PF07517 SecA DEAD-like domain 6 382 2.5E-128 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 SMART SM00957 5 382 3.2E-283 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 ProSitePatterns PS01312 SecA family signature. 480 495 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 Gene3D G3DSA:3.90.1440.10 227 348 0.0 T 12-10-2018 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 Pfam PF01043 SecA preprotein cross-linking domain 230 338 6.7E-42 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 PRINTS PR00906 SecA protein signature 393 406 6.5E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 PRINTS PR00906 SecA protein signature 168 188 6.5E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 PRINTS PR00906 SecA protein signature 115 125 6.5E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 PRINTS PR00906 SecA protein signature 356 373 6.5E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 PRINTS PR00906 SecA protein signature 99 113 6.5E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 PRINTS PR00906 SecA protein signature 61 85 6.5E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 PRINTS PR00906 SecA protein signature 319 341 6.5E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 Pfam PF07516 SecA Wing and Scaffold domain 568 778 2.2E-65 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 SUPERFAMILY SSF81767 225 348 2.88E-47 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 496 6.1E-241 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 Gene3D G3DSA:3.40.50.300 397 570 0.0 T 12-10-2018 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 Pfam PF02810 SEC-C motif 818 836 4.7E-8 T 12-10-2018 IPR004027 SEC-C motif N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 SUPERFAMILY SSF81886 571 826 4.45E-79 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 SMART SM00958 226 338 6.6E-69 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 781 19.682 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 SUPERFAMILY SSF52540 396 569 4.09E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 Gene3D G3DSA:1.10.3060.10 571 772 0.0 T 12-10-2018 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 SUPERFAMILY SSF52540 6 395 6.06E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 Gene3D G3DSA:1.10.1200.230 621 705 0.0 T 12-10-2018 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 Gene3D G3DSA:3.40.50.300 14 396 0.0 T 12-10-2018 N288_21930 ea4c9dfb4841c559b1e0cf4e877abd39 838 Gene3D G3DSA:3.10.450.50 773 837 2.7E-8 T 12-10-2018 N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 Gene3D G3DSA:1.10.8.60 278 346 6.6E-30 T 12-10-2018 N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 Pfam PF00308 Bacterial dnaA protein 112 328 6.8E-108 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 Gene3D G3DSA:3.40.50.300 96 276 4.3E-55 T 12-10-2018 N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 SMART SM00760 356 425 2.2E-41 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 209 223 7.9E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 177 191 7.9E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 243 270 7.9E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 145 165 7.9E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 406 425 7.9E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 Gene3D G3DSA:3.30.300.180 1 82 1.0E-30 T 12-10-2018 IPR038454 DnaA, N-terminal domain superfamily N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 Gene3D G3DSA:1.10.1750.10 347 447 3.0E-36 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 SUPERFAMILY SSF48295 343 447 3.4E-37 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 SMART SM00382 144 272 1.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 8 444 4.3E-187 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 357 425 1.1E-30 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 SUPERFAMILY SSF52540 112 324 1.23E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 Pfam PF11638 DnaA N-terminal domain 6 66 5.8E-18 T 12-10-2018 IPR024633 DnaA N-terminal domain N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 5 447 35.11 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 N288_00005 e98b5444591876ea98fcb546e78d7ab1 448 ProSitePatterns PS01008 DnaA protein signature. 406 425 - T 12-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 N288_03685 fd97f6c3ebd1ff69475ec322a3dcb456 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.8E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_03685 fd97f6c3ebd1ff69475ec322a3dcb456 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 1.8E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_03685 fd97f6c3ebd1ff69475ec322a3dcb456 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 1.8E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_03685 fd97f6c3ebd1ff69475ec322a3dcb456 127 Gene3D G3DSA:1.10.1660.10 1 127 1.3E-29 T 12-10-2018 N288_03685 fd97f6c3ebd1ff69475ec322a3dcb456 127 SMART SM00422 3 71 4.4E-23 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_03685 fd97f6c3ebd1ff69475ec322a3dcb456 127 SUPERFAMILY SSF46955 3 119 1.28E-28 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily N288_03685 fd97f6c3ebd1ff69475ec322a3dcb456 127 Pfam PF13411 MerR HTH family regulatory protein 3 68 3.7E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_00275 25683a13d9883303cbfb6c7b279ed191 186 Gene3D G3DSA:3.40.1360.20 1 120 2.3E-26 T 12-10-2018 N288_00275 25683a13d9883303cbfb6c7b279ed191 186 SMART SM00493 4 77 3.3E-7 T 12-10-2018 IPR006171 TOPRIM domain N288_00275 25683a13d9883303cbfb6c7b279ed191 186 SUPERFAMILY SSF110455 1 114 4.71E-37 T 12-10-2018 N288_00275 25683a13d9883303cbfb6c7b279ed191 186 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 2 176 8.5E-61 T 12-10-2018 IPR004466 Ribonuclease M5 GO:0043822 N288_00275 25683a13d9883303cbfb6c7b279ed191 186 Hamap MF_01469 Ribonuclease M5 [rnmV]. 3 178 32.609 T 12-10-2018 IPR004466 Ribonuclease M5 GO:0043822 N288_00275 25683a13d9883303cbfb6c7b279ed191 186 Pfam PF13331 Domain of unknown function (DUF4093) 93 175 6.4E-30 T 12-10-2018 IPR025156 Ribonuclease M5, C-terminal domain N288_00275 25683a13d9883303cbfb6c7b279ed191 186 Pfam PF13662 Toprim domain 4 70 1.8E-6 T 12-10-2018 IPR006171 TOPRIM domain N288_02335 10d50eb4fe82b1de74b9dc419472a1e8 328 Gene3D G3DSA:3.40.50.720 133 271 5.2E-98 T 12-10-2018 N288_02335 10d50eb4fe82b1de74b9dc419472a1e8 328 SMART SM00829 10 320 3.0E-26 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 N288_02335 10d50eb4fe82b1de74b9dc419472a1e8 328 Pfam PF13602 Zinc-binding dehydrogenase 192 320 1.4E-28 T 12-10-2018 N288_02335 10d50eb4fe82b1de74b9dc419472a1e8 328 SUPERFAMILY SSF50129 1 155 1.26E-34 T 12-10-2018 IPR011032 GroES-like superfamily N288_02335 10d50eb4fe82b1de74b9dc419472a1e8 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 95 9.3E-7 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 N288_02335 10d50eb4fe82b1de74b9dc419472a1e8 328 SUPERFAMILY SSF51735 122 297 2.77E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_02335 10d50eb4fe82b1de74b9dc419472a1e8 328 Gene3D G3DSA:3.90.180.10 18 320 5.2E-98 T 12-10-2018 N288_19425 8a3534388b8a5b61588334ec22d982d0 784 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 410 426 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 N288_19425 8a3534388b8a5b61588334ec22d982d0 784 Gene3D G3DSA:3.40.50.300 293 598 1.2E-82 T 12-10-2018 N288_19425 8a3534388b8a5b61588334ec22d982d0 784 Gene3D G3DSA:1.10.1420.10 111 226 2.0E-6 T 12-10-2018 N288_19425 8a3534388b8a5b61588334ec22d982d0 784 SMART SM00463 706 784 9.9E-23 T 12-10-2018 IPR002625 Smr domain N288_19425 8a3534388b8a5b61588334ec22d982d0 784 SUPERFAMILY SSF160443 708 783 1.83E-9 T 12-10-2018 IPR036063 Smr domain superfamily N288_19425 8a3534388b8a5b61588334ec22d982d0 784 Pfam PF00488 MutS domain V 331 513 6.5E-33 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 N288_19425 8a3534388b8a5b61588334ec22d982d0 784 Gene3D G3DSA:1.10.1420.10 64 280 2.0E-6 T 12-10-2018 N288_19425 8a3534388b8a5b61588334ec22d982d0 784 Gene3D G3DSA:3.30.1370.110 697 784 2.3E-23 T 12-10-2018 N288_19425 8a3534388b8a5b61588334ec22d982d0 784 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 783 22.249 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 N288_19425 8a3534388b8a5b61588334ec22d982d0 784 SUPERFAMILY SSF48334 33 288 1.44E-26 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily N288_19425 8a3534388b8a5b61588334ec22d982d0 784 SMART SM00533 12 315 1.9E-25 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 N288_19425 8a3534388b8a5b61588334ec22d982d0 784 SUPERFAMILY SSF52540 293 515 2.63E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_19425 8a3534388b8a5b61588334ec22d982d0 784 SMART SM00534 328 513 1.1E-74 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 N288_19425 8a3534388b8a5b61588334ec22d982d0 784 Pfam PF01713 Smr domain 709 784 4.4E-20 T 12-10-2018 IPR002625 Smr domain N288_19425 8a3534388b8a5b61588334ec22d982d0 784 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 783 4.4E-275 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 N288_19425 8a3534388b8a5b61588334ec22d982d0 784 PIRSF PIRSF005814 1 784 1.2E-273 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 N288_14895 199fdaff3e38d3b5578df58cce91c380 89 Pfam PF00253 Ribosomal protein S14p/S29e 36 88 1.2E-28 T 12-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_14895 199fdaff3e38d3b5578df58cce91c380 89 SUPERFAMILY SSF57716 2 89 2.85E-32 T 12-10-2018 N288_14895 199fdaff3e38d3b5578df58cce91c380 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 25.674 T 12-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid N288_14895 199fdaff3e38d3b5578df58cce91c380 89 Gene3D G3DSA:4.10.830.10 27 89 5.6E-26 T 12-10-2018 N288_14895 199fdaff3e38d3b5578df58cce91c380 89 ProSitePatterns PS00527 Ribosomal protein S14 signature. 51 73 - T 12-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_12205 824659d81fc562777d5a9e926e318276 605 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 12 601 1.2E-201 T 12-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 N288_12205 824659d81fc562777d5a9e926e318276 605 Gene3D G3DSA:1.10.1370.20 234 605 1.7E-116 T 12-10-2018 N288_12205 824659d81fc562777d5a9e926e318276 605 SUPERFAMILY SSF55486 11 584 9.39E-109 T 12-10-2018 N288_12205 824659d81fc562777d5a9e926e318276 605 Pfam PF01432 Peptidase family M3 213 590 4.9E-37 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 N288_12205 824659d81fc562777d5a9e926e318276 605 Gene3D G3DSA:1.20.140.70 29 182 6.7E-38 T 12-10-2018 N288_12205 824659d81fc562777d5a9e926e318276 605 Pfam PF08439 Oligopeptidase F 119 188 4.2E-19 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain N288_19395 db045971e6425640ca6d312bbc44859d 325 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 198 281 4.7E-35 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 N288_19395 db045971e6425640ca6d312bbc44859d 325 SUPERFAMILY SSF52402 4 190 3.7E-47 T 12-10-2018 N288_19395 db045971e6425640ca6d312bbc44859d 325 Gene3D G3DSA:3.40.50.1220 195 324 4.6E-56 T 12-10-2018 N288_19395 db045971e6425640ca6d312bbc44859d 325 SMART SM00893 5 195 4.9E-42 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 N288_19395 db045971e6425640ca6d312bbc44859d 325 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 262 288 - T 12-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 N288_19395 db045971e6425640ca6d312bbc44859d 325 Pfam PF01012 Electron transfer flavoprotein domain 5 178 6.0E-40 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 N288_19395 db045971e6425640ca6d312bbc44859d 325 SUPERFAMILY SSF52467 198 317 2.73E-48 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily N288_19395 db045971e6425640ca6d312bbc44859d 325 Gene3D G3DSA:3.40.50.620 1 194 3.3E-51 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_19395 db045971e6425640ca6d312bbc44859d 325 PIRSF PIRSF000089 1 322 8.2E-111 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 N288_17290 48304f5376c4769e1dd99f909a579eae 183 Gene3D G3DSA:1.10.1740.10 1 71 8.8E-25 T 12-10-2018 N288_17290 48304f5376c4769e1dd99f909a579eae 183 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 163 9.9E-35 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_17290 48304f5376c4769e1dd99f909a579eae 183 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 30 61 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_17290 48304f5376c4769e1dd99f909a579eae 183 Pfam PF04542 Sigma-70 region 2 8 74 3.5E-18 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_17290 48304f5376c4769e1dd99f909a579eae 183 Pfam PF08281 Sigma-70, region 4 109 159 7.5E-11 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_17290 48304f5376c4769e1dd99f909a579eae 183 SUPERFAMILY SSF88659 86 167 2.24E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_17290 48304f5376c4769e1dd99f909a579eae 183 SUPERFAMILY SSF88946 4 92 1.96E-23 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_17290 48304f5376c4769e1dd99f909a579eae 183 Gene3D G3DSA:1.10.10.10 88 167 5.7E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_13555 ecf3ce14dcc83fad189361b851747689 178 SUPERFAMILY SSF52218 2 172 2.33E-32 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_13555 ecf3ce14dcc83fad189361b851747689 178 Gene3D G3DSA:3.40.50.360 1 175 1.8E-41 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_13555 ecf3ce14dcc83fad189361b851747689 178 Pfam PF03358 NADPH-dependent FMN reductase 2 145 6.8E-30 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 N288_01485 3075753a11c588c82813c419348c6cef 159 Pfam PF03703 Bacterial PH domain 72 145 1.3E-15 T 12-10-2018 IPR005182 Domain of unknown function DUF304 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 Gene3D G3DSA:3.40.50.1000 321 677 0.0 T 12-10-2018 IPR023214 HAD superfamily N288_09375 5ce7289888aa15972b208d1cffc517d7 892 Gene3D G3DSA:1.20.1110.10 54 877 0.0 T 12-10-2018 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 Pfam PF00702 haloacid dehalogenase-like hydrolase 322 646 1.6E-26 T 12-10-2018 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 Pfam PF00689 Cation transporting ATPase, C-terminus 716 881 8.8E-53 T 12-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 SMART SM00831 2 76 2.0E-24 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 Pfam PF00122 E1-E2 ATPase 110 304 4.4E-56 T 12-10-2018 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 83 178 2.9E-19 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 210 346 1.1E-28 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 600 722 3.7E-38 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 427 578 2.4E-18 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 SUPERFAMILY SSF81653 114 223 6.02E-31 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 SUPERFAMILY SSF56784 322 736 7.38E-66 T 12-10-2018 IPR036412 HAD-like superfamily N288_09375 5ce7289888aa15972b208d1cffc517d7 892 SUPERFAMILY SSF81665 2 881 3.79E-135 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 Gene3D G3DSA:2.70.150.10 15 227 0.0 T 12-10-2018 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 SUPERFAMILY SSF81660 332 534 5.01E-58 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 Gene3D G3DSA:3.40.1110.10 334 537 0.0 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 488 506 2.3E-18 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 632 648 2.3E-18 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 604 620 2.3E-18 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 664 689 2.3E-18 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 TIGRFAM TIGR01116 ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 54 882 1.8E-212 T 12-10-2018 IPR005782 P-type ATPase, subfamily IIA, SERCA-type GO:0005388|GO:0006816|GO:0016021 Reactome: R-HSA-1912420|Reactome: R-HSA-418359|Reactome: R-HSA-5578775|Reactome: R-HSA-936837 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 Pfam PF00690 Cation transporter/ATPase, N-terminus 4 71 6.5E-18 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 326 332 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 324 338 6.5E-41 T 12-10-2018 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 651 6.5E-41 T 12-10-2018 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 530 541 6.5E-41 T 12-10-2018 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 552 562 6.5E-41 T 12-10-2018 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 161 175 6.5E-41 T 12-10-2018 N288_09375 5ce7289888aa15972b208d1cffc517d7 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 656 668 6.5E-41 T 12-10-2018 N288_09825 823cd0cd27f356647ab2231ca399e1e0 218 Pfam PF04509 CheC-like family 15 52 1.6E-14 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 N288_09825 823cd0cd27f356647ab2231ca399e1e0 218 Pfam PF04509 CheC-like family 116 152 1.2E-10 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 N288_09825 823cd0cd27f356647ab2231ca399e1e0 218 SUPERFAMILY SSF103039 12 214 4.1E-51 T 12-10-2018 IPR028976 CheC-like superfamily N288_09825 823cd0cd27f356647ab2231ca399e1e0 218 Gene3D G3DSA:3.40.1550.10 11 215 1.3E-59 T 12-10-2018 IPR028976 CheC-like superfamily N288_04380 ee40e32a9b43de8c3fe50275afa58024 286 SUPERFAMILY SSF88946 6 82 1.65E-14 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_04380 ee40e32a9b43de8c3fe50275afa58024 286 Pfam PF04542 Sigma-70 region 2 11 70 2.8E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_04380 ee40e32a9b43de8c3fe50275afa58024 286 Pfam PF08281 Sigma-70, region 4 109 160 1.6E-10 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_04380 ee40e32a9b43de8c3fe50275afa58024 286 Gene3D G3DSA:1.10.1740.10 2 75 4.1E-12 T 12-10-2018 N288_04380 ee40e32a9b43de8c3fe50275afa58024 286 TIGRFAM TIGR02957 SigX4: RNA polymerase sigma-70 factor, TIGR02957 family 6 284 2.0E-102 T 12-10-2018 IPR014303 RNA polymerase sigma-70, ECF type N288_04380 ee40e32a9b43de8c3fe50275afa58024 286 Gene3D G3DSA:1.10.10.10 101 163 5.8E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_04380 ee40e32a9b43de8c3fe50275afa58024 286 SUPERFAMILY SSF54427 171 283 7.76E-10 T 12-10-2018 IPR032710 NTF2-like domain superfamily N288_04380 ee40e32a9b43de8c3fe50275afa58024 286 SUPERFAMILY SSF88659 103 162 6.17E-9 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_04380 ee40e32a9b43de8c3fe50275afa58024 286 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 160 7.9E-19 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_05445 6b75588d71f89969dcb81ffb31ff1eeb 295 Gene3D G3DSA:3.40.630.30 3 163 3.0E-23 T 12-10-2018 N288_05445 6b75588d71f89969dcb81ffb31ff1eeb 295 SUPERFAMILY SSF55729 22 230 1.11E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_05445 6b75588d71f89969dcb81ffb31ff1eeb 295 Pfam PF13527 Acetyltransferase (GNAT) domain 22 133 4.2E-14 T 12-10-2018 N288_08485 4b406188c7796ce58a9a93ebbf705fb7 222 Gene3D G3DSA:3.40.50.720 1 222 3.1E-60 T 12-10-2018 N288_08485 4b406188c7796ce58a9a93ebbf705fb7 222 Pfam PF13460 NAD(P)H-binding 8 197 2.2E-11 T 12-10-2018 IPR016040 NAD(P)-binding domain N288_08485 4b406188c7796ce58a9a93ebbf705fb7 222 SUPERFAMILY SSF51735 1 208 1.3E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_06890 bd96e6427df4c70ccd42e3455f70c133 346 Gene3D G3DSA:3.90.1150.10 247 340 5.4E-26 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_06890 bd96e6427df4c70ccd42e3455f70c133 346 SUPERFAMILY SSF53383 1 338 7.76E-121 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_06890 bd96e6427df4c70ccd42e3455f70c133 346 Gene3D G3DSA:3.40.640.10 1 246 1.3E-92 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_06890 bd96e6427df4c70ccd42e3455f70c133 346 Pfam PF01212 Beta-eliminating lyase 3 287 2.3E-98 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 N288_06890 bd96e6427df4c70ccd42e3455f70c133 346 PIRSF PIRSF017617 1 345 7.3E-129 T 12-10-2018 IPR023603 Threonine aldolase N288_25020 31954825cebfa88e1d9df8146fb43321 282 Gene3D G3DSA:1.10.10.60 58 115 7.9E-14 T 12-10-2018 N288_25020 31954825cebfa88e1d9df8146fb43321 282 SMART SM00871 129 280 2.8E-19 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding N288_25020 31954825cebfa88e1d9df8146fb43321 282 Pfam PF12833 Helix-turn-helix domain 27 106 5.4E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_25020 31954825cebfa88e1d9df8146fb43321 282 SUPERFAMILY SSF46689 57 111 5.82E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_25020 31954825cebfa88e1d9df8146fb43321 282 Pfam PF06445 GyrI-like small molecule binding domain 129 279 7.6E-18 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain N288_25020 31954825cebfa88e1d9df8146fb43321 282 Gene3D G3DSA:1.10.10.60 3 57 2.5E-15 T 12-10-2018 N288_25020 31954825cebfa88e1d9df8146fb43321 282 Gene3D G3DSA:3.20.80.10 129 281 1.3E-27 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily N288_25020 31954825cebfa88e1d9df8146fb43321 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 74 89 1.4E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 N288_25020 31954825cebfa88e1d9df8146fb43321 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 89 105 1.4E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 N288_25020 31954825cebfa88e1d9df8146fb43321 282 SUPERFAMILY SSF46689 5 55 8.06E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_25020 31954825cebfa88e1d9df8146fb43321 282 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 101 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 N288_25020 31954825cebfa88e1d9df8146fb43321 282 SUPERFAMILY SSF55136 129 279 1.62E-17 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily N288_25020 31954825cebfa88e1d9df8146fb43321 282 SMART SM00342 21 105 1.8E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_18170 de97d1f824ef26617080d1f8a23f92fd 771 Pfam PF00534 Glycosyl transferases group 1 583 741 5.3E-38 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 N288_18170 de97d1f824ef26617080d1f8a23f92fd 771 SUPERFAMILY SSF88713 35 216 3.56E-24 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 N288_18170 de97d1f824ef26617080d1f8a23f92fd 771 Pfam PF13439 Glycosyltransferase Family 4 396 567 9.6E-29 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 N288_18170 de97d1f824ef26617080d1f8a23f92fd 771 Gene3D G3DSA:3.20.110.10 84 215 6.3E-25 T 12-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily N288_18170 de97d1f824ef26617080d1f8a23f92fd 771 Gene3D G3DSA:3.40.50.2000 566 745 4.5E-91 T 12-10-2018 N288_18170 de97d1f824ef26617080d1f8a23f92fd 771 Gene3D G3DSA:3.40.50.2000 386 761 4.5E-91 T 12-10-2018 N288_18170 de97d1f824ef26617080d1f8a23f92fd 771 Pfam PF03065 Glycosyl hydrolase family 57 79 182 2.1E-13 T 12-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 N288_18170 de97d1f824ef26617080d1f8a23f92fd 771 SUPERFAMILY SSF53756 384 764 1.3E-88 T 12-10-2018 N288_16190 67f975c0792b308452cda7b8f482afb8 460 Pfam PF02954 Bacterial regulatory protein, Fis family 416 454 9.7E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 N288_16190 67f975c0792b308452cda7b8f482afb8 460 Pfam PF00158 Sigma-54 interaction domain 156 314 3.1E-57 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 N288_16190 67f975c0792b308452cda7b8f482afb8 460 Gene3D G3DSA:1.10.8.60 322 390 4.5E-23 T 12-10-2018 N288_16190 67f975c0792b308452cda7b8f482afb8 460 SUPERFAMILY SSF46689 362 456 3.58E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_16190 67f975c0792b308452cda7b8f482afb8 460 SMART SM00382 170 313 1.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_16190 67f975c0792b308452cda7b8f482afb8 460 Gene3D G3DSA:3.40.50.300 141 320 1.3E-54 T 12-10-2018 N288_16190 67f975c0792b308452cda7b8f482afb8 460 Gene3D G3DSA:1.10.10.60 391 457 6.2E-15 T 12-10-2018 N288_16190 67f975c0792b308452cda7b8f482afb8 460 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 235 250 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 N288_16190 67f975c0792b308452cda7b8f482afb8 460 SUPERFAMILY SSF55785 3 108 1.05E-10 T 12-10-2018 IPR035965 PAS domain superfamily N288_16190 67f975c0792b308452cda7b8f482afb8 460 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 437 457 2.9E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 N288_16190 67f975c0792b308452cda7b8f482afb8 460 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 437 2.9E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 N288_16190 67f975c0792b308452cda7b8f482afb8 460 Gene3D G3DSA:3.30.450.20 1 113 3.3E-12 T 12-10-2018 N288_16190 67f975c0792b308452cda7b8f482afb8 460 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 362 371 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site N288_16190 67f975c0792b308452cda7b8f482afb8 460 SUPERFAMILY SSF52540 157 392 1.36E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_14860 82cdd803743aca1f07395cfbf36fe322 486 Pfam PF07690 Major Facilitator Superfamily 27 419 9.5E-43 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_14860 82cdd803743aca1f07395cfbf36fe322 486 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 22 442 2.6E-92 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 N288_14860 82cdd803743aca1f07395cfbf36fe322 486 Gene3D G3DSA:1.20.1720.10 22 232 1.2E-33 T 12-10-2018 N288_14860 82cdd803743aca1f07395cfbf36fe322 486 Gene3D G3DSA:1.20.1250.20 269 484 3.8E-19 T 12-10-2018 N288_14860 82cdd803743aca1f07395cfbf36fe322 486 SUPERFAMILY SSF103473 22 480 9.59E-53 T 12-10-2018 IPR036259 MFS transporter superfamily N288_14860 82cdd803743aca1f07395cfbf36fe322 486 PRINTS PR01036 Tetracycline resistance protein TetB signature 25 49 6.9E-8 T 12-10-2018 N288_14860 82cdd803743aca1f07395cfbf36fe322 486 PRINTS PR01036 Tetracycline resistance protein TetB signature 312 336 6.9E-8 T 12-10-2018 N288_14860 82cdd803743aca1f07395cfbf36fe322 486 PRINTS PR01036 Tetracycline resistance protein TetB signature 116 136 6.9E-8 T 12-10-2018 N288_14860 82cdd803743aca1f07395cfbf36fe322 486 PRINTS PR01036 Tetracycline resistance protein TetB signature 146 170 6.9E-8 T 12-10-2018 N288_07390 8443d6059414aece71b10a2fc440a479 341 SUPERFAMILY SSF53822 62 337 1.73E-79 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_07390 8443d6059414aece71b10a2fc440a479 341 Gene3D G3DSA:3.40.50.2300 76 328 9.0E-83 T 12-10-2018 N288_07390 8443d6059414aece71b10a2fc440a479 341 Gene3D G3DSA:3.40.50.2300 167 330 9.0E-83 T 12-10-2018 N288_07390 8443d6059414aece71b10a2fc440a479 341 Gene3D G3DSA:1.10.260.40 1 60 2.2E-24 T 12-10-2018 N288_07390 8443d6059414aece71b10a2fc440a479 341 Pfam PF13377 Periplasmic binding protein-like domain 175 336 4.7E-39 T 12-10-2018 N288_07390 8443d6059414aece71b10a2fc440a479 341 SUPERFAMILY SSF47413 2 60 9.0E-19 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_07390 8443d6059414aece71b10a2fc440a479 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.7E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_07390 8443d6059414aece71b10a2fc440a479 341 SMART SM00354 2 72 9.8E-33 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_09700 21facfa84c911dc11585f85364a83e9d 338 Pfam PF01706 FliG C-terminal domain 222 327 1.5E-41 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal N288_09700 21facfa84c911dc11585f85364a83e9d 338 Pfam PF14842 FliG N-terminal domain 8 111 1.3E-36 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain N288_09700 21facfa84c911dc11585f85364a83e9d 338 Gene3D G3DSA:1.10.220.30 199 338 3.7E-48 T 12-10-2018 N288_09700 21facfa84c911dc11585f85364a83e9d 338 SUPERFAMILY SSF48029 118 328 1.24E-68 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical N288_09700 21facfa84c911dc11585f85364a83e9d 338 PIRSF PIRSF003161 3 338 6.7E-124 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 N288_09700 21facfa84c911dc11585f85364a83e9d 338 Pfam PF14841 FliG middle domain 119 193 1.3E-31 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain N288_09700 21facfa84c911dc11585f85364a83e9d 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 38 64 6.0E-76 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 N288_09700 21facfa84c911dc11585f85364a83e9d 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 9 25 6.0E-76 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 N288_09700 21facfa84c911dc11585f85364a83e9d 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 230 250 6.0E-76 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 N288_09700 21facfa84c911dc11585f85364a83e9d 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 199 224 6.0E-76 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 N288_09700 21facfa84c911dc11585f85364a83e9d 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 252 272 6.0E-76 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 N288_09700 21facfa84c911dc11585f85364a83e9d 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 118 141 6.0E-76 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 N288_09700 21facfa84c911dc11585f85364a83e9d 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 276 302 6.0E-76 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 N288_09700 21facfa84c911dc11585f85364a83e9d 338 Gene3D G3DSA:1.10.220.30 2 88 2.7E-20 T 12-10-2018 N288_09700 21facfa84c911dc11585f85364a83e9d 338 Gene3D G3DSA:1.10.220.30 107 198 1.7E-34 T 12-10-2018 N288_09700 21facfa84c911dc11585f85364a83e9d 338 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 338 6.5E-154 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 N288_09700 21facfa84c911dc11585f85364a83e9d 338 SUPERFAMILY SSF48029 9 103 3.79E-21 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical N288_06435 dc8ef0641a4edf63a3d3da3ca32949eb 186 SMART SM00530 11 66 3.7E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_06435 dc8ef0641a4edf63a3d3da3ca32949eb 186 Gene3D G3DSA:1.10.260.40 4 69 5.7E-14 T 12-10-2018 N288_06435 dc8ef0641a4edf63a3d3da3ca32949eb 186 Gene3D G3DSA:3.30.450.20 70 181 7.1E-9 T 12-10-2018 N288_06435 dc8ef0641a4edf63a3d3da3ca32949eb 186 Pfam PF08448 PAS fold 79 180 7.2E-9 T 12-10-2018 IPR013656 PAS fold-4 N288_06435 dc8ef0641a4edf63a3d3da3ca32949eb 186 SUPERFAMILY SSF47413 9 77 2.22E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_06435 dc8ef0641a4edf63a3d3da3ca32949eb 186 SUPERFAMILY SSF55785 71 172 4.19E-9 T 12-10-2018 IPR035965 PAS domain superfamily N288_06435 dc8ef0641a4edf63a3d3da3ca32949eb 186 Pfam PF01381 Helix-turn-helix 15 63 1.3E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_17445 06876641e256fe44bcf89807e83f1a4e 434 SUPERFAMILY SSF54680 331 433 1.83E-28 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 N288_17445 06876641e256fe44bcf89807e83f1a4e 434 SMART SM00941 345 418 2.8E-30 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 N288_17445 06876641e256fe44bcf89807e83f1a4e 434 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 417 5.7E-25 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 N288_17445 06876641e256fe44bcf89807e83f1a4e 434 PIRSF PIRSF000478 1 433 2.3E-167 T 12-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 N288_17445 06876641e256fe44bcf89807e83f1a4e 434 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 12-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 N288_17445 06876641e256fe44bcf89807e83f1a4e 434 SUPERFAMILY SSF47648 1 69 4.97E-23 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 N288_17445 06876641e256fe44bcf89807e83f1a4e 434 Gene3D G3DSA:3.40.1030.10 77 330 1.1E-152 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 N288_17445 06876641e256fe44bcf89807e83f1a4e 434 Gene3D G3DSA:1.20.970.10 1 67 2.8E-30 T 12-10-2018 N288_17445 06876641e256fe44bcf89807e83f1a4e 434 Pfam PF00591 Glycosyl transferase family, a/b domain 78 306 8.4E-49 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 N288_17445 06876641e256fe44bcf89807e83f1a4e 434 Gene3D G3DSA:3.90.1170.30 331 419 1.1E-152 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 N288_17445 06876641e256fe44bcf89807e83f1a4e 434 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 66 1.6E-22 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 N288_17445 06876641e256fe44bcf89807e83f1a4e 434 SUPERFAMILY SSF52418 69 329 1.06E-93 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 N288_17445 06876641e256fe44bcf89807e83f1a4e 434 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 3 417 8.4E-180 T 12-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 N288_25000 362763248b942c5628cea79b48bf4afb 140 SUPERFAMILY SSF54197 2 122 3.71E-27 T 12-10-2018 IPR036265 HIT-like superfamily N288_25000 362763248b942c5628cea79b48bf4afb 140 Pfam PF01230 HIT domain 12 111 2.3E-13 T 12-10-2018 IPR001310 Histidine triad (HIT) protein N288_25000 362763248b942c5628cea79b48bf4afb 140 Gene3D G3DSA:3.30.428.10 1 130 1.6E-28 T 12-10-2018 IPR036265 HIT-like superfamily N288_18195 e73802f8681fcbbab326c4fc661d097f 275 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_18195 e73802f8681fcbbab326c4fc661d097f 275 SMART SM00382 53 247 7.0E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_18195 e73802f8681fcbbab326c4fc661d097f 275 Pfam PF00005 ABC transporter 44 200 1.9E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_18195 e73802f8681fcbbab326c4fc661d097f 275 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 29 275 8.0E-127 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 N288_18195 e73802f8681fcbbab326c4fc661d097f 275 Gene3D G3DSA:3.40.50.300 30 271 2.2E-63 T 12-10-2018 N288_18195 e73802f8681fcbbab326c4fc661d097f 275 SUPERFAMILY SSF52540 24 261 2.42E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_06515 615fad5f447951be602c409376698856 103 Gene3D G3DSA:3.30.1340.10 6 87 4.2E-6 T 12-10-2018 IPR035895 HPr-like superfamily N288_06515 615fad5f447951be602c409376698856 103 SUPERFAMILY SSF55594 21 87 8.5E-6 T 12-10-2018 IPR035895 HPr-like superfamily N288_09960 633d0455c9315943c15ec8d6111daef2 305 SUPERFAMILY SSF55120 1 222 6.62E-80 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_09960 633d0455c9315943c15ec8d6111daef2 305 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 301 19.104 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_09960 633d0455c9315943c15ec8d6111daef2 305 Gene3D G3DSA:3.30.2350.10 1 240 8.0E-90 T 12-10-2018 N288_09960 633d0455c9315943c15ec8d6111daef2 305 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 179 236 2.7E-11 T 12-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 N288_09960 633d0455c9315943c15ec8d6111daef2 305 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 1 215 1.2E-78 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_09960 633d0455c9315943c15ec8d6111daef2 305 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 23 178 1.4E-58 T 12-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 N288_22725 a50aa270797af139c1415b78d2db33f7 227 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 206 7.8E-52 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 N288_22725 a50aa270797af139c1415b78d2db33f7 227 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 N288_22725 a50aa270797af139c1415b78d2db33f7 227 ProSitePatterns PS00958 Transaldolase active site. 83 100 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 N288_22725 a50aa270797af139c1415b78d2db33f7 227 SUPERFAMILY SSF51569 1 216 8.37E-67 T 12-10-2018 N288_22725 a50aa270797af139c1415b78d2db33f7 227 Gene3D G3DSA:3.20.20.70 1 221 2.3E-76 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_23545 785b0d1e14a48046999204edc67a275d 279 SUPERFAMILY SSF117143 116 236 2.88E-16 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like N288_23545 785b0d1e14a48046999204edc67a275d 279 Pfam PF00460 Flagella basal body rod protein 5 35 2.2E-8 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 N288_23545 785b0d1e14a48046999204edc67a275d 279 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 155 8.8E-27 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G N288_23545 785b0d1e14a48046999204edc67a275d 279 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site N288_23545 785b0d1e14a48046999204edc67a275d 279 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 198 273 2.2E-21 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain N288_12435 0671ac3fa2dc8b09780f2d2af7826263 43 Pfam PF08970 Sporulation inhibitor A 1 38 3.4E-9 T 12-10-2018 IPR015064 Sporulation inhibitor A N288_12435 0671ac3fa2dc8b09780f2d2af7826263 43 Gene3D G3DSA:1.10.287.1100 4 37 1.4E-5 T 12-10-2018 IPR036916 Sporulation inhibitor A superfamily N288_12435 0671ac3fa2dc8b09780f2d2af7826263 43 SUPERFAMILY SSF100985 1 39 9.02E-8 T 12-10-2018 IPR036916 Sporulation inhibitor A superfamily N288_19725 1611bad2439cc138cef97ffb66017358 150 SUPERFAMILY SSF52402 5 144 1.0E-35 T 12-10-2018 N288_19725 1611bad2439cc138cef97ffb66017358 150 PIRSF PIRSF006276 1 147 4.5E-21 T 12-10-2018 IPR006015 Universal stress protein A N288_19725 1611bad2439cc138cef97ffb66017358 150 PRINTS PR01438 Universal stress protein signature 5 23 2.1E-18 T 12-10-2018 IPR006015 Universal stress protein A N288_19725 1611bad2439cc138cef97ffb66017358 150 PRINTS PR01438 Universal stress protein signature 104 116 2.1E-18 T 12-10-2018 IPR006015 Universal stress protein A N288_19725 1611bad2439cc138cef97ffb66017358 150 PRINTS PR01438 Universal stress protein signature 122 144 2.1E-18 T 12-10-2018 IPR006015 Universal stress protein A N288_19725 1611bad2439cc138cef97ffb66017358 150 Pfam PF00582 Universal stress protein family 5 144 1.6E-36 T 12-10-2018 IPR006016 UspA N288_19725 1611bad2439cc138cef97ffb66017358 150 Gene3D G3DSA:3.40.50.620 7 144 9.6E-42 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_03095 2073c09a5517f1ea7c086c4c6fa0c250 615 SUPERFAMILY SSF90123 44 360 1.57E-87 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_03095 2073c09a5517f1ea7c086c4c6fa0c250 615 Pfam PF00664 ABC transporter transmembrane region 57 328 4.3E-58 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 N288_03095 2073c09a5517f1ea7c086c4c6fa0c250 615 Gene3D G3DSA:3.40.50.300 370 614 2.4E-89 T 12-10-2018 N288_03095 2073c09a5517f1ea7c086c4c6fa0c250 615 SMART SM00382 399 591 1.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_03095 2073c09a5517f1ea7c086c4c6fa0c250 615 Pfam PF00005 ABC transporter 392 539 2.6E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_03095 2073c09a5517f1ea7c086c4c6fa0c250 615 SUPERFAMILY SSF52540 366 609 6.85E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_03095 2073c09a5517f1ea7c086c4c6fa0c250 615 ProSitePatterns PS00211 ABC transporters family signature. 511 525 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_03095 2073c09a5517f1ea7c086c4c6fa0c250 615 Gene3D G3DSA:1.20.1560.10 20 360 6.3E-110 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_19920 65617698499bd92bf3ac9a20ac60b682 332 Pfam PF13377 Periplasmic binding protein-like domain 169 331 1.1E-32 T 12-10-2018 N288_19920 65617698499bd92bf3ac9a20ac60b682 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 12-10-2018 N288_19920 65617698499bd92bf3ac9a20ac60b682 332 Gene3D G3DSA:3.40.50.2300 63 310 1.2E-88 T 12-10-2018 N288_19920 65617698499bd92bf3ac9a20ac60b682 332 TIGRFAM TIGR01481 ccpA: catabolite control protein A 1 332 4.7E-162 T 12-10-2018 IPR006377 Catabolite control protein A GO:0006355 N288_19920 65617698499bd92bf3ac9a20ac60b682 332 Gene3D G3DSA:3.40.50.2300 161 291 1.2E-88 T 12-10-2018 N288_19920 65617698499bd92bf3ac9a20ac60b682 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 5.7E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_19920 65617698499bd92bf3ac9a20ac60b682 332 SUPERFAMILY SSF47413 2 60 5.94E-20 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_19920 65617698499bd92bf3ac9a20ac60b682 332 SMART SM00354 2 72 3.7E-39 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_19920 65617698499bd92bf3ac9a20ac60b682 332 Gene3D G3DSA:1.10.260.40 1 60 2.5E-29 T 12-10-2018 N288_19920 65617698499bd92bf3ac9a20ac60b682 332 SUPERFAMILY SSF53822 62 332 6.48E-84 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_19920 65617698499bd92bf3ac9a20ac60b682 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 4.3E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_19920 65617698499bd92bf3ac9a20ac60b682 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 4.3E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 SUPERFAMILY SSF88946 16 121 8.77E-34 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 238 264 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 PIRSF PIRSF000770 134 168 0.99 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 PIRSF PIRSF000770 169 270 2.4E-14 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 PIRSF PIRSF000770 26 133 1.3E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 Pfam PF04545 Sigma-70, region 4 218 264 7.2E-13 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 267 7.0E-34 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 SUPERFAMILY SSF88659 186 269 2.43E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 TIGRFAM TIGR02850 spore_sigG: RNA polymerase sigma-G factor 15 268 1.3E-155 T 12-10-2018 IPR014212 RNA polymerase sigma-G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 Pfam PF04542 Sigma-70 region 2 53 121 4.3E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 PRINTS PR00046 Major sigma-70 factor signature 238 253 3.2E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 PRINTS PR00046 Major sigma-70 factor signature 77 90 3.2E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 PRINTS PR00046 Major sigma-70 factor signature 253 264 3.2E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 PRINTS PR00046 Major sigma-70 factor signature 221 233 3.2E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 PRINTS PR00046 Major sigma-70 factor signature 101 109 3.2E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 Gene3D G3DSA:1.20.120.1810 7 121 1.7E-26 T 12-10-2018 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 SUPERFAMILY SSF88659 125 201 1.79E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 Pfam PF04539 Sigma-70 region 3 135 184 4.0E-7 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 47 268 4.1E-82 T 12-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_09255 d25008cb43e5ba453d2fb8b7ddf79418 270 Gene3D G3DSA:1.20.140.160 124 270 4.7E-25 T 12-10-2018 N288_19760 41ef03799f3a00f4c873aa835fef7924 328 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 216 240 5.3E-7 T 12-10-2018 N288_19760 41ef03799f3a00f4c873aa835fef7924 328 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 120 134 5.3E-7 T 12-10-2018 N288_19760 41ef03799f3a00f4c873aa835fef7924 328 PIRSF PIRSF026567 1 328 1.3E-145 T 12-10-2018 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted N288_19760 41ef03799f3a00f4c873aa835fef7924 328 Gene3D G3DSA:1.10.150.470 1 85 2.1E-27 T 12-10-2018 N288_19760 41ef03799f3a00f4c873aa835fef7924 328 SUPERFAMILY SSF53335 18 317 1.7E-44 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_19760 41ef03799f3a00f4c873aa835fef7924 328 Gene3D G3DSA:3.40.50.150 87 327 1.5E-52 T 12-10-2018 N288_19760 41ef03799f3a00f4c873aa835fef7924 328 Pfam PF02384 N-6 DNA Methylase 114 318 1.7E-17 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 N288_06725 ab6e8e523d473237abb7a2d7fdab61a3 61 Pfam PF14120 YhzD-like protein 1 60 3.4E-29 T 12-10-2018 IPR025544 YhzD-like protein N288_16770 4ed48029ddff0f459cca8f15311d7af9 767 SMART SM00490 307 394 7.4E-12 T 12-10-2018 IPR001650 Helicase, C-terminal N288_16770 4ed48029ddff0f459cca8f15311d7af9 767 SMART SM00487 56 260 2.5E-32 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_16770 4ed48029ddff0f459cca8f15311d7af9 767 Pfam PF00271 Helicase conserved C-terminal domain 290 393 2.2E-12 T 12-10-2018 IPR001650 Helicase, C-terminal N288_16770 4ed48029ddff0f459cca8f15311d7af9 767 Pfam PF09369 Domain of unknown function (DUF1998) 655 733 3.6E-21 T 12-10-2018 IPR018973 DEAD/DEAH-box helicase, putative N288_16770 4ed48029ddff0f459cca8f15311d7af9 767 Pfam PF00270 DEAD/DEAH box helicase 63 232 5.7E-27 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 N288_16770 4ed48029ddff0f459cca8f15311d7af9 767 Gene3D G3DSA:3.40.50.300 26 251 1.0E-46 T 12-10-2018 N288_16770 4ed48029ddff0f459cca8f15311d7af9 767 SUPERFAMILY SSF52540 71 404 6.32E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_16770 4ed48029ddff0f459cca8f15311d7af9 767 Gene3D G3DSA:3.40.50.300 269 470 2.1E-20 T 12-10-2018 N288_09830 f03d19d1f176730f701233488da4d25c 165 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 4 161 27.506 T 12-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 N288_09830 f03d19d1f176730f701233488da4d25c 165 Gene3D G3DSA:3.30.1330.200 5 164 1.9E-48 T 12-10-2018 IPR038592 CheD-like superfamily N288_09830 f03d19d1f176730f701233488da4d25c 165 SUPERFAMILY SSF64438 7 163 1.46E-47 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic N288_09830 f03d19d1f176730f701233488da4d25c 165 Pfam PF03975 CheD chemotactic sensory transduction 51 157 1.1E-35 T 12-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 N288_18380 f2040d8f1a9974a75c82a65e564dd14b 253 SUPERFAMILY SSF50249 3 77 9.77E-20 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_18380 f2040d8f1a9974a75c82a65e564dd14b 253 SUPERFAMILY SSF57863 81 232 1.46E-50 T 12-10-2018 IPR037278 ARFGAP/RecO-like zinc finger N288_18380 f2040d8f1a9974a75c82a65e564dd14b 253 Pfam PF02565 Recombination protein O C terminal 82 237 1.4E-41 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 N288_18380 f2040d8f1a9974a75c82a65e564dd14b 253 Hamap MF_00201 DNA repair protein RecO [recO]. 1 243 31.409 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 N288_18380 f2040d8f1a9974a75c82a65e564dd14b 253 Pfam PF11967 Recombination protein O N terminal 4 77 2.3E-25 T 12-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal N288_18380 f2040d8f1a9974a75c82a65e564dd14b 253 TIGRFAM TIGR00613 reco: DNA repair protein RecO 4 243 7.8E-82 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 N288_18380 f2040d8f1a9974a75c82a65e564dd14b 253 Gene3D G3DSA:2.40.50.140 3 76 3.2E-13 T 12-10-2018 N288_18380 f2040d8f1a9974a75c82a65e564dd14b 253 Gene3D G3DSA:1.20.1440.120 88 225 7.2E-22 T 12-10-2018 N288_18380 f2040d8f1a9974a75c82a65e564dd14b 253 Gene3D G3DSA:3.30.60.100 146 185 7.2E-22 T 12-10-2018 N288_19520 cc21fa39d4fdc29647110b3655ae0cbb 308 Pfam PF01695 IstB-like ATP binding protein 158 269 8.0E-11 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 N288_19520 cc21fa39d4fdc29647110b3655ae0cbb 308 Gene3D G3DSA:3.40.50.300 108 300 3.8E-53 T 12-10-2018 N288_19520 cc21fa39d4fdc29647110b3655ae0cbb 308 SUPERFAMILY SSF52540 149 272 7.0E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_19520 cc21fa39d4fdc29647110b3655ae0cbb 308 SMART SM00382 158 295 1.0E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_19520 cc21fa39d4fdc29647110b3655ae0cbb 308 Pfam PF07319 Primosomal protein DnaI N-terminus 1 98 6.0E-33 T 12-10-2018 IPR009928 Primosomal DnaI, N-terminal N288_09000 0fd584021e2667c129765b7a3cafc346 143 Pfam PF00571 CBS domain 4 54 2.7E-10 T 12-10-2018 IPR000644 CBS domain N288_09000 0fd584021e2667c129765b7a3cafc346 143 Pfam PF00571 CBS domain 68 118 5.7E-17 T 12-10-2018 IPR000644 CBS domain N288_09000 0fd584021e2667c129765b7a3cafc346 143 Gene3D G3DSA:3.10.580.10 1 142 8.4E-39 T 12-10-2018 N288_09000 0fd584021e2667c129765b7a3cafc346 143 SUPERFAMILY SSF54631 2 117 2.91E-35 T 12-10-2018 N288_09000 0fd584021e2667c129765b7a3cafc346 143 SMART SM00116 75 122 8.5E-14 T 12-10-2018 IPR000644 CBS domain N288_09000 0fd584021e2667c129765b7a3cafc346 143 SMART SM00116 11 58 2.0E-7 T 12-10-2018 IPR000644 CBS domain N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 Pfam PF00512 His Kinase A (phospho-acceptor) domain 379 444 3.1E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 SUPERFAMILY SSF55874 434 604 9.43E-50 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 Gene3D G3DSA:3.30.450.20 32 184 1.3E-29 T 12-10-2018 N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 Gene3D G3DSA:3.30.565.10 450 608 5.8E-49 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 Pfam PF00989 PAS fold 267 331 1.1E-7 T 12-10-2018 IPR013767 PAS fold GO:0006355 N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 491 600 3.7E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 SMART SM00388 378 445 3.9E-22 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 Gene3D G3DSA:3.30.450.20 275 369 6.0E-21 T 12-10-2018 N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 SMART SM00387 490 602 7.7E-43 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 SMART SM00304 206 258 4.6E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 1.8E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 555 1.8E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 1.8E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 541 1.8E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 Gene3D G3DSA:1.10.287.130 204 274 1.3E-9 T 12-10-2018 N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 Pfam PF00672 HAMP domain 207 255 1.2E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 Gene3D G3DSA:1.10.287.130 370 449 4.7E-27 T 12-10-2018 N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 SMART SM00091 265 331 1.0E-6 T 12-10-2018 IPR000014 PAS domain N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 SUPERFAMILY SSF47384 364 445 7.85E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 SUPERFAMILY SSF158472 207 255 2.62E-9 T 12-10-2018 N288_25840 0e81d06a7c2331cc4c1d0bd85ca9f362 609 SUPERFAMILY SSF55785 253 370 1.22E-11 T 12-10-2018 IPR035965 PAS domain superfamily N288_13815 4b7697ed89596813be5b974d6b00155f 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 1.7E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_13815 4b7697ed89596813be5b974d6b00155f 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 1.7E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_13815 4b7697ed89596813be5b974d6b00155f 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 1.7E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_13815 4b7697ed89596813be5b974d6b00155f 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 1.7E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_13815 4b7697ed89596813be5b974d6b00155f 141 SUPERFAMILY SSF46785 27 139 1.0E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_13815 4b7697ed89596813be5b974d6b00155f 141 Gene3D G3DSA:1.10.10.10 6 141 1.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_13815 4b7697ed89596813be5b974d6b00155f 141 SMART SM00347 22 123 4.1E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_13815 4b7697ed89596813be5b974d6b00155f 141 Pfam PF01047 MarR family 46 88 2.1E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_06930 1da59cc9ce3789cc8a4419ce9ca70acb 205 Pfam PF11724 YvbH-like oligomerisation region 144 205 1.8E-24 T 12-10-2018 IPR021722 Uncharacterised domain YvbH-like, oligomerisation domain N288_06930 1da59cc9ce3789cc8a4419ce9ca70acb 205 Pfam PF08000 Bacterial PH domain 12 132 1.3E-33 T 12-10-2018 IPR012544 Bacterial Pleckstrin homology domain N288_06930 1da59cc9ce3789cc8a4419ce9ca70acb 205 Gene3D G3DSA:1.10.287.210 116 205 1.3E-30 T 12-10-2018 N288_06930 1da59cc9ce3789cc8a4419ce9ca70acb 205 SUPERFAMILY SSF50729 14 204 2.03E-65 T 12-10-2018 N288_06930 1da59cc9ce3789cc8a4419ce9ca70acb 205 Gene3D G3DSA:2.30.29.50 12 115 1.2E-45 T 12-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily N288_05955 62d2caf43b0cbb487bab1aecb3ef4b63 249 Gene3D G3DSA:3.40.109.10 1 249 2.6E-77 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 N288_05955 62d2caf43b0cbb487bab1aecb3ef4b63 249 Pfam PF00881 Nitroreductase family 8 165 1.3E-19 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 N288_05955 62d2caf43b0cbb487bab1aecb3ef4b63 249 SUPERFAMILY SSF55469 1 247 8.25E-70 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 N288_05955 62d2caf43b0cbb487bab1aecb3ef4b63 249 PIRSF PIRSF005426 1 249 1.9E-86 T 12-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 N288_24790 0aafbc93fa8589e9e065719019b95a19 291 Gene3D G3DSA:2.120.10.30 3 291 3.2E-113 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like N288_24790 0aafbc93fa8589e9e065719019b95a19 291 SUPERFAMILY SSF63829 3 287 4.06E-75 T 12-10-2018 N288_24790 0aafbc93fa8589e9e065719019b95a19 291 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 155 175 1.0E-52 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) N288_24790 0aafbc93fa8589e9e065719019b95a19 291 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 238 256 1.0E-52 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) N288_24790 0aafbc93fa8589e9e065719019b95a19 291 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 195 212 1.0E-52 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) N288_24790 0aafbc93fa8589e9e065719019b95a19 291 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 15 32 1.0E-52 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) N288_24790 0aafbc93fa8589e9e065719019b95a19 291 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 132 154 1.0E-52 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) N288_24790 0aafbc93fa8589e9e065719019b95a19 291 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 91 112 1.0E-52 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) N288_24790 0aafbc93fa8589e9e065719019b95a19 291 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 14 257 1.4E-86 T 12-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 91 635 2.0E-225 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 Gene3D G3DSA:1.10.287.380 877 949 7.1E-23 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 Gene3D G3DSA:1.10.730.10 78 812 0.0 T 12-10-2018 N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 Hamap MF_02004 Valine--tRNA ligase [valS]. 78 949 16.257 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 Pfam PF08264 Anticodon-binding domain of tRNA 678 823 3.8E-43 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 SUPERFAMILY SSF50677 267 417 1.28E-64 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 SUPERFAMILY SSF52374 75 645 7.37E-146 T 12-10-2018 N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 119 130 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 Gene3D G3DSA:3.90.740.10 251 417 0.0 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 SUPERFAMILY SSF47323 647 899 2.62E-76 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 TIGRFAM TIGR00422 valS: valine--tRNA ligase 78 931 0.0 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 Gene3D G3DSA:3.40.50.620 98 596 0.0 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 SUPERFAMILY SSF46589 884 948 7.85E-17 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 PRINTS PR00986 Valyl-tRNA synthetase signature 306 323 5.5E-39 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 PRINTS PR00986 Valyl-tRNA synthetase signature 547 565 5.5E-39 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 PRINTS PR00986 Valyl-tRNA synthetase signature 421 434 5.5E-39 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 PRINTS PR00986 Valyl-tRNA synthetase signature 112 123 5.5E-39 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 PRINTS PR00986 Valyl-tRNA synthetase signature 515 536 5.5E-39 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 N288_19160 c5c125d59ba6cc637e41763e39aaa3c5 950 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 884 949 1.7E-23 T 12-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 N288_07635 7a91c2e358fe16b7aabf8614d372cc02 311 SUPERFAMILY SSF52540 5 251 2.86E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_07635 7a91c2e358fe16b7aabf8614d372cc02 311 SMART SM00382 35 229 1.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_07635 7a91c2e358fe16b7aabf8614d372cc02 311 Pfam PF00005 ABC transporter 27 179 1.6E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_07635 7a91c2e358fe16b7aabf8614d372cc02 311 Gene3D G3DSA:3.40.50.300 3 311 2.1E-92 T 12-10-2018 N288_07635 7a91c2e358fe16b7aabf8614d372cc02 311 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_07635 7a91c2e358fe16b7aabf8614d372cc02 311 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 231 277 3.0E-9 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_08955 a5cc9f9a4cf3cff526d911ffd93fcfe8 355 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 154 234 3.1E-13 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08955 a5cc9f9a4cf3cff526d911ffd93fcfe8 355 SUPERFAMILY SSF46626 254 351 5.76E-18 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 N288_08955 a5cc9f9a4cf3cff526d911ffd93fcfe8 355 Pfam PF00034 Cytochrome c 260 352 1.2E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08955 a5cc9f9a4cf3cff526d911ffd93fcfe8 355 SUPERFAMILY SSF81464 16 115 3.11E-21 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08955 a5cc9f9a4cf3cff526d911ffd93fcfe8 355 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 33 244 1.7E-52 T 12-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08955 a5cc9f9a4cf3cff526d911ffd93fcfe8 355 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 50 106 1.6E-9 T 12-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08955 a5cc9f9a4cf3cff526d911ffd93fcfe8 355 Gene3D G3DSA:1.10.287.90 27 115 4.2E-24 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08955 a5cc9f9a4cf3cff526d911ffd93fcfe8 355 SUPERFAMILY SSF49503 125 280 1.0E-39 T 12-10-2018 IPR008972 Cupredoxin N288_08955 a5cc9f9a4cf3cff526d911ffd93fcfe8 355 Gene3D G3DSA:2.60.40.2600 126 355 5.2E-66 T 12-10-2018 N288_08955 a5cc9f9a4cf3cff526d911ffd93fcfe8 355 PRINTS PR01166 Cytochrome c oxidase subunit II signature 217 234 4.0E-7 T 12-10-2018 N288_08955 a5cc9f9a4cf3cff526d911ffd93fcfe8 355 PRINTS PR01166 Cytochrome c oxidase subunit II signature 95 115 4.0E-7 T 12-10-2018 N288_08955 a5cc9f9a4cf3cff526d911ffd93fcfe8 355 PRINTS PR01166 Cytochrome c oxidase subunit II signature 83 95 4.0E-7 T 12-10-2018 N288_08955 a5cc9f9a4cf3cff526d911ffd93fcfe8 355 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 174 228 - T 12-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_10165 9be286a5d98ecda9912b41da80b72df4 288 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 48 195 2.8E-31 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 N288_10165 9be286a5d98ecda9912b41da80b72df4 288 TIGRFAM TIGR02177 PorB_KorB: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 14 274 4.9E-96 T 12-10-2018 IPR011896 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate N288_10165 9be286a5d98ecda9912b41da80b72df4 288 Pfam PF12367 Pyruvate ferredoxin oxidoreductase beta subunit C terminal 199 264 7.3E-23 T 12-10-2018 IPR032686 Pyruvate ferredoxin oxidoreductase beta subunit, C-terminal N288_10165 9be286a5d98ecda9912b41da80b72df4 288 Gene3D G3DSA:3.40.50.970 70 224 1.4E-27 T 12-10-2018 N288_10165 9be286a5d98ecda9912b41da80b72df4 288 SUPERFAMILY SSF52518 12 265 9.32E-78 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_16170 96e891878965297bd2ae5ed3ae24bc80 524 SUPERFAMILY SSF56024 337 514 1.26E-58 T 12-10-2018 N288_16170 96e891878965297bd2ae5ed3ae24bc80 524 Pfam PF13089 Polyphosphate kinase N-terminal domain 19 125 1.8E-40 T 12-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 N288_16170 96e891878965297bd2ae5ed3ae24bc80 524 Gene3D G3DSA:3.30.1840.10 12 330 4.1E-111 T 12-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 N288_16170 96e891878965297bd2ae5ed3ae24bc80 524 Pfam PF02503 Polyphosphate kinase middle domain 136 342 5.9E-69 T 12-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 N288_16170 96e891878965297bd2ae5ed3ae24bc80 524 SUPERFAMILY SSF143724 123 323 3.92E-58 T 12-10-2018 N288_16170 96e891878965297bd2ae5ed3ae24bc80 524 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 18 517 3.3E-195 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 N288_16170 96e891878965297bd2ae5ed3ae24bc80 524 Pfam PF13090 Polyphosphate kinase C-terminal domain 351 516 9.4E-82 T 12-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 N288_16170 96e891878965297bd2ae5ed3ae24bc80 524 Gene3D G3DSA:3.30.870.10 338 519 1.6E-76 T 12-10-2018 N288_16170 96e891878965297bd2ae5ed3ae24bc80 524 SUPERFAMILY SSF140356 15 121 7.98E-39 T 12-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 N288_17815 49df7c581a917fa50ec29d114618ba9f 298 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 84 100 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site N288_17815 49df7c581a917fa50ec29d114618ba9f 298 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 217 229 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site N288_17815 49df7c581a917fa50ec29d114618ba9f 298 Gene3D G3DSA:1.10.600.10 3 298 1.1E-105 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily N288_17815 49df7c581a917fa50ec29d114618ba9f 298 Pfam PF00348 Polyprenyl synthetase 33 272 1.2E-64 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 N288_17815 49df7c581a917fa50ec29d114618ba9f 298 SUPERFAMILY SSF48576 15 277 1.78E-87 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily N288_19155 cfc788be739ac3546f4908804e2e65bf 437 Gene3D G3DSA:3.90.190.20 301 431 1.7E-30 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 N288_19155 cfc788be739ac3546f4908804e2e65bf 437 TIGRFAM TIGR01499 folC: bifunctional protein FolC 24 424 1.9E-127 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 N288_19155 cfc788be739ac3546f4908804e2e65bf 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 299 377 9.0E-9 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 N288_19155 cfc788be739ac3546f4908804e2e65bf 437 Gene3D G3DSA:3.40.1190.10 3 300 1.9E-104 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 N288_19155 cfc788be739ac3546f4908804e2e65bf 437 SUPERFAMILY SSF53623 3 299 7.56E-96 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 N288_19155 cfc788be739ac3546f4908804e2e65bf 437 SUPERFAMILY SSF53244 301 430 4.58E-26 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 N288_19155 cfc788be739ac3546f4908804e2e65bf 437 PIRSF PIRSF001563 1 433 3.0E-152 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 N288_19155 cfc788be739ac3546f4908804e2e65bf 437 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 44 67 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 N288_19155 cfc788be739ac3546f4908804e2e65bf 437 Pfam PF08245 Mur ligase middle domain 46 274 3.8E-14 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 N288_19155 cfc788be739ac3546f4908804e2e65bf 437 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 143 158 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 N288_25315 75cfd4de8c5a1779be79591f071ff85c 175 Gene3D G3DSA:2.40.128.110 2 174 6.5E-54 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily N288_25315 75cfd4de8c5a1779be79591f071ff85c 175 SMART SM00867 3 172 2.7E-67 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like N288_25315 75cfd4de8c5a1779be79591f071ff85c 175 Pfam PF04264 YceI-like domain 4 170 2.6E-48 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like N288_25315 75cfd4de8c5a1779be79591f071ff85c 175 SUPERFAMILY SSF101874 2 173 8.89E-55 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily N288_11620 eae0e59e7935b73bcb48010a7d678c37 409 Gene3D G3DSA:3.75.10.10 6 404 2.3E-159 T 12-10-2018 N288_11620 eae0e59e7935b73bcb48010a7d678c37 409 Pfam PF02274 Amidinotransferase 19 406 6.2E-107 T 12-10-2018 N288_11620 eae0e59e7935b73bcb48010a7d678c37 409 PIRSF PIRSF006356 1 409 8.8E-162 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 N288_11620 eae0e59e7935b73bcb48010a7d678c37 409 PRINTS PR01466 Bacterial arginine deiminase signature 152 170 1.2E-57 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 N288_11620 eae0e59e7935b73bcb48010a7d678c37 409 PRINTS PR01466 Bacterial arginine deiminase signature 345 362 1.2E-57 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 N288_11620 eae0e59e7935b73bcb48010a7d678c37 409 PRINTS PR01466 Bacterial arginine deiminase signature 365 379 1.2E-57 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 N288_11620 eae0e59e7935b73bcb48010a7d678c37 409 PRINTS PR01466 Bacterial arginine deiminase signature 3 23 1.2E-57 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 N288_11620 eae0e59e7935b73bcb48010a7d678c37 409 PRINTS PR01466 Bacterial arginine deiminase signature 180 195 1.2E-57 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 N288_11620 eae0e59e7935b73bcb48010a7d678c37 409 PRINTS PR01466 Bacterial arginine deiminase signature 388 406 1.2E-57 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 N288_11620 eae0e59e7935b73bcb48010a7d678c37 409 TIGRFAM TIGR01078 arcA: arginine deiminase 5 408 7.7E-167 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 N288_11620 eae0e59e7935b73bcb48010a7d678c37 409 Hamap MF_00242 Arginine deiminase [arcA]. 2 409 46.638 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 N288_11620 eae0e59e7935b73bcb48010a7d678c37 409 Gene3D G3DSA:1.10.3930.10 69 152 2.3E-159 T 12-10-2018 N288_11620 eae0e59e7935b73bcb48010a7d678c37 409 SUPERFAMILY SSF55909 1 408 1.68E-128 T 12-10-2018 N288_16810 72ead9a5997cb4f437415b4f15191a49 122 Gene3D G3DSA:1.20.120.440 3 122 6.0E-42 T 12-10-2018 IPR023351 YppE-like superfamily N288_16810 72ead9a5997cb4f437415b4f15191a49 122 Pfam PF08807 Bacterial domain of unknown function (DUF1798) 11 117 4.6E-40 T 12-10-2018 IPR014913 Protein of unknown function DUF1798 N288_16810 72ead9a5997cb4f437415b4f15191a49 122 SUPERFAMILY SSF140415 5 121 1.83E-42 T 12-10-2018 IPR023351 YppE-like superfamily N288_17750 f89fa04342101a1d9d3854591f54a0b4 308 Pfam PF01515 Phosphate acetyl/butaryl transferase 85 302 4.5E-47 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 N288_17750 f89fa04342101a1d9d3854591f54a0b4 308 Gene3D G3DSA:3.40.718.10 7 307 1.0E-107 T 12-10-2018 N288_17750 f89fa04342101a1d9d3854591f54a0b4 308 SUPERFAMILY SSF53659 13 306 3.89E-65 T 12-10-2018 N288_17750 f89fa04342101a1d9d3854591f54a0b4 308 TIGRFAM TIGR02706 P_butyryltrans: phosphate butyryltransferase 12 306 3.6E-128 T 12-10-2018 IPR014079 Phosphate butyryltransferase GO:0016740|GO:0019605|GO:0050182 KEGG: 00650+2.3.1.19 N288_17750 f89fa04342101a1d9d3854591f54a0b4 308 PIRSF PIRSF000428 6 308 9.8E-86 T 12-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 N288_19545 2cfc81b18360c3c00043cbf353ec60ad 343 SUPERFAMILY SSF55347 152 314 4.17E-73 T 12-10-2018 N288_19545 2cfc81b18360c3c00043cbf353ec60ad 343 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_19545 2cfc81b18360c3c00043cbf353ec60ad 343 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 2.0E-133 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_19545 2cfc81b18360c3c00043cbf353ec60ad 343 PIRSF PIRSF000149 1 335 2.7E-139 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_19545 2cfc81b18360c3c00043cbf353ec60ad 343 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 102 2.2E-36 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_19545 2cfc81b18360c3c00043cbf353ec60ad 343 Gene3D G3DSA:3.40.50.720 4 328 6.5E-151 T 12-10-2018 N288_19545 2cfc81b18360c3c00043cbf353ec60ad 343 SUPERFAMILY SSF51735 1 179 8.86E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_19545 2cfc81b18360c3c00043cbf353ec60ad 343 Gene3D G3DSA:3.30.360.10 151 315 6.5E-151 T 12-10-2018 N288_19545 2cfc81b18360c3c00043cbf353ec60ad 343 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 2.4E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_19545 2cfc81b18360c3c00043cbf353ec60ad 343 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 2.4E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_19545 2cfc81b18360c3c00043cbf353ec60ad 343 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 2.4E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_19545 2cfc81b18360c3c00043cbf353ec60ad 343 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.4E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_19545 2cfc81b18360c3c00043cbf353ec60ad 343 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 2.4E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_19545 2cfc81b18360c3c00043cbf353ec60ad 343 SMART SM00846 3 152 9.3E-83 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_19545 2cfc81b18360c3c00043cbf353ec60ad 343 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 4.3E-70 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_25910 ad6042703fe936f1059c6480420e68a1 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 26.086 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_25910 ad6042703fe936f1059c6480420e68a1 149 Gene3D G3DSA:3.10.430.100 60 148 2.4E-34 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily N288_25910 ad6042703fe936f1059c6480420e68a1 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 5.5E-22 T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_25910 ad6042703fe936f1059c6480420e68a1 149 Gene3D G3DSA:3.40.5.10 1 52 4.3E-24 T 12-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_25910 ad6042703fe936f1059c6480420e68a1 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 6.4E-32 T 12-10-2018 IPR020069 Ribosomal protein L9, C-terminal N288_25910 ad6042703fe936f1059c6480420e68a1 149 SUPERFAMILY SSF55658 1 56 5.41E-17 T 12-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal N288_25910 ad6042703fe936f1059c6480420e68a1 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_25910 ad6042703fe936f1059c6480420e68a1 149 SUPERFAMILY SSF55653 58 147 1.7E-29 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily N288_25910 ad6042703fe936f1059c6480420e68a1 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 4.7E-51 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_15795 d488a94a3cc2553575c0e49e7cea484e 448 Gene3D G3DSA:1.10.357.20 268 444 1.1E-57 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain N288_15795 d488a94a3cc2553575c0e49e7cea484e 448 SUPERFAMILY SSF161093 275 443 4.45E-52 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 N288_15795 d488a94a3cc2553575c0e49e7cea484e 448 Gene3D G3DSA:3.10.580.10 129 256 4.6E-44 T 12-10-2018 N288_15795 d488a94a3cc2553575c0e49e7cea484e 448 TIGRFAM TIGR00400 mgtE: magnesium transporter 3 445 2.6E-162 T 12-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 N288_15795 d488a94a3cc2553575c0e49e7cea484e 448 SUPERFAMILY SSF54631 131 262 8.59E-35 T 12-10-2018 N288_15795 d488a94a3cc2553575c0e49e7cea484e 448 Pfam PF01769 Divalent cation transporter 316 437 2.9E-30 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 N288_15795 d488a94a3cc2553575c0e49e7cea484e 448 Pfam PF03448 MgtE intracellular N domain 29 130 6.3E-21 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain N288_15795 d488a94a3cc2553575c0e49e7cea484e 448 Pfam PF00571 CBS domain 196 250 4.3E-10 T 12-10-2018 IPR000644 CBS domain N288_15795 d488a94a3cc2553575c0e49e7cea484e 448 Pfam PF00571 CBS domain 132 190 3.2E-8 T 12-10-2018 IPR000644 CBS domain N288_15795 d488a94a3cc2553575c0e49e7cea484e 448 Gene3D G3DSA:1.25.60.10 2 127 3.6E-22 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily N288_15795 d488a94a3cc2553575c0e49e7cea484e 448 SUPERFAMILY SSF158791 3 129 8.11E-27 T 12-10-2018 N288_15795 d488a94a3cc2553575c0e49e7cea484e 448 SMART SM00116 139 192 0.044 T 12-10-2018 IPR000644 CBS domain N288_15795 d488a94a3cc2553575c0e49e7cea484e 448 SMART SM00116 203 251 6.2E-9 T 12-10-2018 IPR000644 CBS domain N288_15795 d488a94a3cc2553575c0e49e7cea484e 448 SMART SM00924 29 132 6.3E-25 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 Gene3D G3DSA:3.50.50.60 209 499 1.2E-107 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 242 257 1.6E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 345 369 1.6E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 262 272 1.6E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 308 316 1.6E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 330 342 1.6E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 210 232 1.6E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 469 487 1.6E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 435 456 1.6E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 397 413 1.6E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 2 509 1.3E-243 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 349 367 1.5E-39 T 12-10-2018 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 433 449 1.5E-39 T 12-10-2018 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 459 481 1.5E-39 T 12-10-2018 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 211 230 1.5E-39 T 12-10-2018 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 307 325 1.5E-39 T 12-10-2018 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 337 357 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 SUPERFAMILY SSF52833 3 100 4.58E-27 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 Gene3D G3DSA:3.40.30.80 2 198 1.1E-59 T 12-10-2018 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 PIRSF PIRSF000238 2 509 1.4E-258 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 Pfam PF13192 Thioredoxin domain 125 191 2.3E-8 T 12-10-2018 IPR012336 Thioredoxin-like fold N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 209 488 4.2E-46 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 SUPERFAMILY SSF52833 104 193 2.6E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 SUPERFAMILY SSF51905 200 505 3.33E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_24510 62faa63d3baa54d9f4cf27b987a33ba1 509 Gene3D G3DSA:3.50.50.60 319 441 1.2E-107 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_23700 9be99b3a30033d400656f31b1972993d 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 2.8E-39 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23700 9be99b3a30033d400656f31b1972993d 286 PRINTS PR00126 ATP synthase gamma subunit signature 232 251 2.8E-39 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23700 9be99b3a30033d400656f31b1972993d 286 PRINTS PR00126 ATP synthase gamma subunit signature 263 284 2.8E-39 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23700 9be99b3a30033d400656f31b1972993d 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 2.8E-39 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23700 9be99b3a30033d400656f31b1972993d 286 SUPERFAMILY SSF52943 2 285 9.55E-92 T 12-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23700 9be99b3a30033d400656f31b1972993d 286 Gene3D G3DSA:3.40.1380.10 61 204 3.7E-102 T 12-10-2018 N288_23700 9be99b3a30033d400656f31b1972993d 286 Gene3D G3DSA:1.10.287.80 6 281 3.7E-102 T 12-10-2018 N288_23700 9be99b3a30033d400656f31b1972993d 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 2 285 3.4E-110 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23700 9be99b3a30033d400656f31b1972993d 286 Pfam PF00231 ATP synthase 3 285 7.7E-98 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23700 9be99b3a30033d400656f31b1972993d 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 285 35.946 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23700 9be99b3a30033d400656f31b1972993d 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 271 284 - T 12-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_26015 635e14f8d9b8d9a017e129d154ebf333 206 Pfam PF14804 Jag N-terminus 7 55 7.1E-20 T 12-10-2018 IPR032782 Jag, N-terminal N288_26015 635e14f8d9b8d9a017e129d154ebf333 206 Gene3D G3DSA:3.30.30.80 1 57 4.2E-20 T 12-10-2018 IPR038247 Jag, N-terminal domain superfamily N288_26015 635e14f8d9b8d9a017e129d154ebf333 206 SMART SM01245 5 57 5.3E-23 T 12-10-2018 IPR032782 Jag, N-terminal N288_26015 635e14f8d9b8d9a017e129d154ebf333 206 Pfam PF01424 R3H domain 145 203 2.6E-15 T 12-10-2018 IPR001374 R3H domain GO:0003676 N288_26015 635e14f8d9b8d9a017e129d154ebf333 206 SUPERFAMILY SSF82708 146 205 1.47E-10 T 12-10-2018 IPR036867 R3H domain superfamily GO:0003676 N288_26015 635e14f8d9b8d9a017e129d154ebf333 206 SMART SM00393 126 205 1.5E-19 T 12-10-2018 IPR001374 R3H domain GO:0003676 N288_26015 635e14f8d9b8d9a017e129d154ebf333 206 Pfam PF13083 KH domain 65 130 1.2E-14 T 12-10-2018 N288_26015 635e14f8d9b8d9a017e129d154ebf333 206 Gene3D G3DSA:3.30.1370.50 141 206 3.0E-27 T 12-10-2018 IPR036867 R3H domain superfamily GO:0003676 N288_26015 635e14f8d9b8d9a017e129d154ebf333 206 Gene3D G3DSA:3.30.300.20 59 140 1.3E-24 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta N288_24900 1481fbde6c4b140d5d2440687c6a4faa 308 Pfam PF04542 Sigma-70 region 2 22 88 5.8E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_24900 1481fbde6c4b140d5d2440687c6a4faa 308 SUPERFAMILY SSF88659 103 167 6.76E-7 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_24900 1481fbde6c4b140d5d2440687c6a4faa 308 SUPERFAMILY SSF88946 15 100 4.71E-17 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_24900 1481fbde6c4b140d5d2440687c6a4faa 308 Gene3D G3DSA:1.10.1740.10 7 89 3.2E-16 T 12-10-2018 N288_24900 1481fbde6c4b140d5d2440687c6a4faa 308 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 165 5.3E-17 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_24900 1481fbde6c4b140d5d2440687c6a4faa 308 Gene3D G3DSA:3.10.450.50 177 292 1.3E-6 T 12-10-2018 N288_24900 1481fbde6c4b140d5d2440687c6a4faa 308 SUPERFAMILY SSF54427 178 289 2.21E-13 T 12-10-2018 IPR032710 NTF2-like domain superfamily N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 Gene3D G3DSA:2.10.230.10 142 206 3.5E-36 T 12-10-2018 N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 SUPERFAMILY SSF46565 1 100 3.4E-37 T 12-10-2018 IPR036869 Chaperone J-domain superfamily N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 Pfam PF01556 DnaJ C terminal domain 115 332 2.3E-44 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 PRINTS PR00625 DnaJ domain signature 25 40 1.1E-31 T 12-10-2018 IPR001623 DnaJ domain N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 PRINTS PR00625 DnaJ domain signature 41 61 1.1E-31 T 12-10-2018 IPR001623 DnaJ domain N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 PRINTS PR00625 DnaJ domain signature 61 80 1.1E-31 T 12-10-2018 IPR001623 DnaJ domain N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 PRINTS PR00625 DnaJ domain signature 7 25 1.1E-31 T 12-10-2018 IPR001623 DnaJ domain N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 Pfam PF00684 DnaJ central domain 142 206 4.3E-13 T 12-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 Gene3D G3DSA:2.60.260.20 112 248 3.5E-36 T 12-10-2018 N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 Pfam PF00226 DnaJ domain 5 66 7.9E-27 T 12-10-2018 IPR001623 DnaJ domain N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 SUPERFAMILY SSF57938 129 210 1.57E-18 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 SUPERFAMILY SSF49493 109 255 1.02E-19 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 SUPERFAMILY SSF49493 257 343 2.09E-25 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 Gene3D G3DSA:1.10.287.110 1 107 1.5E-38 T 12-10-2018 IPR036869 Chaperone J-domain superfamily N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 369 41.589 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 9.1E-142 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 Gene3D G3DSA:2.60.260.20 254 361 4.2E-30 T 12-10-2018 N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 12-10-2018 IPR018253 DnaJ domain, conserved site N288_18480 5636e2d1061d1da46ac22821ff6e1f1e 373 SMART SM00271 4 61 2.6E-30 T 12-10-2018 IPR001623 DnaJ domain N288_13290 b7605f3bf76d673448306007c5471590 236 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 45 233 4.4E-71 T 12-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 N288_13290 b7605f3bf76d673448306007c5471590 236 SUPERFAMILY SSF52402 21 199 1.59E-48 T 12-10-2018 N288_13290 b7605f3bf76d673448306007c5471590 236 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 4 235 40.225 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 N288_13290 b7605f3bf76d673448306007c5471590 236 PIRSF PIRSF000857 11 236 6.3E-83 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 N288_13290 b7605f3bf76d673448306007c5471590 236 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 40 211 5.8E-47 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 N288_13290 b7605f3bf76d673448306007c5471590 236 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 24 234 1.1E-83 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 N288_13290 b7605f3bf76d673448306007c5471590 236 Gene3D G3DSA:3.40.50.620 17 236 1.9E-72 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_17000 9ad2416d67e1815ac5bfc915f06ae4bf 429 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 424 2.7E-120 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 N288_17000 9ad2416d67e1815ac5bfc915f06ae4bf 429 SUPERFAMILY SSF55205 6 427 8.01E-133 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 N288_17000 9ad2416d67e1815ac5bfc915f06ae4bf 429 ProSitePatterns PS00885 EPSP synthase signature 2. 341 359 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 N288_17000 9ad2416d67e1815ac5bfc915f06ae4bf 429 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 428 9.4E-130 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 N288_17000 9ad2416d67e1815ac5bfc915f06ae4bf 429 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 429 33.396 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 N288_17000 9ad2416d67e1815ac5bfc915f06ae4bf 429 ProSitePatterns PS00104 EPSP synthase signature 1. 89 103 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 N288_17000 9ad2416d67e1815ac5bfc915f06ae4bf 429 Gene3D G3DSA:3.65.10.10 23 231 3.5E-152 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 N288_17000 9ad2416d67e1815ac5bfc915f06ae4bf 429 Gene3D G3DSA:3.65.10.10 14 424 3.5E-152 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 N288_17000 9ad2416d67e1815ac5bfc915f06ae4bf 429 PIRSF PIRSF000505 1 429 2.4E-117 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 N288_19955 e52709c80171a3b712953a721155d853 431 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 1 431 34.186 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_19955 e52709c80171a3b712953a721155d853 431 SUPERFAMILY SSF53244 294 427 2.38E-37 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 N288_19955 e52709c80171a3b712953a721155d853 431 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 4 428 3.3E-137 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_19955 e52709c80171a3b712953a721155d853 431 Gene3D G3DSA:3.90.190.20 293 429 3.0E-41 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 N288_19955 e52709c80171a3b712953a721155d853 431 SUPERFAMILY SSF53623 87 293 9.16E-57 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 N288_19955 e52709c80171a3b712953a721155d853 431 Pfam PF01225 Mur ligase family, catalytic domain 4 101 9.2E-23 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 N288_19955 e52709c80171a3b712953a721155d853 431 Pfam PF08245 Mur ligase middle domain 106 275 9.1E-25 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 N288_19955 e52709c80171a3b712953a721155d853 431 Gene3D G3DSA:3.40.50.720 3 89 8.1E-21 T 12-10-2018 N288_19955 e52709c80171a3b712953a721155d853 431 Pfam PF02875 Mur ligase family, glutamate ligase domain 295 377 2.5E-19 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 N288_19955 e52709c80171a3b712953a721155d853 431 SUPERFAMILY SSF51984 4 88 3.14E-20 T 12-10-2018 N288_19955 e52709c80171a3b712953a721155d853 431 Gene3D G3DSA:3.40.1190.10 91 292 2.0E-49 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 N288_25700 e20fbe31302521ce122e36c1ebf0026d 355 Gene3D G3DSA:3.40.50.1980 51 191 1.3E-42 T 12-10-2018 N288_25700 e20fbe31302521ce122e36c1ebf0026d 355 Gene3D G3DSA:3.40.50.1980 193 355 3.6E-55 T 12-10-2018 N288_25700 e20fbe31302521ce122e36c1ebf0026d 355 Pfam PF01497 Periplasmic binding protein 74 321 1.4E-30 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain N288_25700 e20fbe31302521ce122e36c1ebf0026d 355 SUPERFAMILY SSF53807 51 326 2.32E-48 T 12-10-2018 N288_16610 5b2e9902682a4fb2a053d48020c916e5 300 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 178 268 1.3E-30 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 N288_16610 5b2e9902682a4fb2a053d48020c916e5 300 Gene3D G3DSA:3.40.50.1010 9 283 1.6E-86 T 12-10-2018 N288_16610 5b2e9902682a4fb2a053d48020c916e5 300 SUPERFAMILY SSF47807 178 292 7.33E-32 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily N288_16610 5b2e9902682a4fb2a053d48020c916e5 300 SMART SM00279 180 215 9.6E-18 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 N288_16610 5b2e9902682a4fb2a053d48020c916e5 300 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 156 6.6E-50 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 N288_16610 5b2e9902682a4fb2a053d48020c916e5 300 SMART SM00475 5 268 7.7E-121 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 N288_16610 5b2e9902682a4fb2a053d48020c916e5 300 SUPERFAMILY SSF88723 7 160 9.08E-46 T 12-10-2018 IPR029060 PIN-like domain superfamily N288_16610 5b2e9902682a4fb2a053d48020c916e5 300 Gene3D G3DSA:1.10.150.20 181 253 1.6E-86 T 12-10-2018 N288_04885 428a1e66cc152d0fabcf655281e5b85a 292 SUPERFAMILY SSF161098 52 279 5.49E-59 T 12-10-2018 IPR035906 MetI-like superfamily N288_04885 428a1e66cc152d0fabcf655281e5b85a 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 280 9.6E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_04885 428a1e66cc152d0fabcf655281e5b85a 292 Gene3D G3DSA:1.10.3720.10 48 289 6.2E-69 T 12-10-2018 IPR035906 MetI-like superfamily N288_02715 c6fde8a4ac1bf75533f975fd60e7c4b7 280 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 44 61 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 N288_02715 c6fde8a4ac1bf75533f975fd60e7c4b7 280 Pfam PF00248 Aldo/keto reductase family 31 266 9.2E-52 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain N288_02715 c6fde8a4ac1bf75533f975fd60e7c4b7 280 PIRSF PIRSF000097 3 125 3.4E-42 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_02715 c6fde8a4ac1bf75533f975fd60e7c4b7 280 PIRSF PIRSF000097 120 277 5.3E-52 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_02715 c6fde8a4ac1bf75533f975fd60e7c4b7 280 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 234 249 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 N288_02715 c6fde8a4ac1bf75533f975fd60e7c4b7 280 SUPERFAMILY SSF51430 8 274 6.02E-94 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily N288_02715 c6fde8a4ac1bf75533f975fd60e7c4b7 280 PRINTS PR00069 Aldo-keto reductase signature 164 193 2.3E-50 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_02715 c6fde8a4ac1bf75533f975fd60e7c4b7 280 PRINTS PR00069 Aldo-keto reductase signature 130 147 2.3E-50 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_02715 c6fde8a4ac1bf75533f975fd60e7c4b7 280 PRINTS PR00069 Aldo-keto reductase signature 100 118 2.3E-50 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_02715 c6fde8a4ac1bf75533f975fd60e7c4b7 280 PRINTS PR00069 Aldo-keto reductase signature 201 225 2.3E-50 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_02715 c6fde8a4ac1bf75533f975fd60e7c4b7 280 PRINTS PR00069 Aldo-keto reductase signature 40 64 2.3E-50 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_02715 c6fde8a4ac1bf75533f975fd60e7c4b7 280 Gene3D G3DSA:3.20.20.100 1 280 4.8E-126 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily N288_02715 c6fde8a4ac1bf75533f975fd60e7c4b7 280 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 130 147 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 N288_17150 db094313772b39cfee45d370b25021b8 449 Pfam PF14620 YpeB sporulation 15 372 2.9E-138 T 12-10-2018 IPR014239 Spore germination YpeB GO:0009847 N288_17150 db094313772b39cfee45d370b25021b8 449 TIGRFAM TIGR02889 spore_YpeB: germination protein YpeB 3 438 8.9E-148 T 12-10-2018 IPR014239 Spore germination YpeB GO:0009847 N288_17720 203d531417b0f4ab2ca25eb27248dcb2 434 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 204 427 6.4E-82 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 N288_17720 203d531417b0f4ab2ca25eb27248dcb2 434 Gene3D G3DSA:3.30.559.10 186 434 1.7E-97 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 N288_17720 203d531417b0f4ab2ca25eb27248dcb2 434 Gene3D G3DSA:4.10.320.10 110 154 6.1E-14 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 N288_17720 203d531417b0f4ab2ca25eb27248dcb2 434 SUPERFAMILY SSF47005 110 153 9.68E-11 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 N288_17720 203d531417b0f4ab2ca25eb27248dcb2 434 Gene3D G3DSA:2.40.50.100 2 105 2.2E-27 T 12-10-2018 N288_17720 203d531417b0f4ab2ca25eb27248dcb2 434 SUPERFAMILY SSF51230 3 90 1.57E-27 T 12-10-2018 IPR011053 Single hybrid motif N288_17720 203d531417b0f4ab2ca25eb27248dcb2 434 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 N288_17720 203d531417b0f4ab2ca25eb27248dcb2 434 SUPERFAMILY SSF52777 205 426 3.83E-83 T 12-10-2018 N288_17720 203d531417b0f4ab2ca25eb27248dcb2 434 Pfam PF00364 Biotin-requiring enzyme 4 77 1.7E-23 T 12-10-2018 IPR000089 Biotin/lipoyl attachment N288_17720 203d531417b0f4ab2ca25eb27248dcb2 434 Pfam PF02817 e3 binding domain 115 148 4.3E-12 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 N288_04825 593017a3388fd50596cd8a151d6e62aa 266 SUPERFAMILY SSF56112 9 204 5.1E-23 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_04825 593017a3388fd50596cd8a151d6e62aa 266 Pfam PF01636 Phosphotransferase enzyme family 106 170 6.6E-11 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase N288_04825 593017a3388fd50596cd8a151d6e62aa 266 Gene3D G3DSA:3.90.1200.10 64 220 1.8E-9 T 12-10-2018 N288_15920 957dfc39bbb801cae2d10c67f77c8f3f 414 PIRSF PIRSF003180 1 409 1.2E-129 T 12-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing N288_15920 957dfc39bbb801cae2d10c67f77c8f3f 414 SMART SM00052 2 198 4.8E-4 T 12-10-2018 IPR001633 EAL domain N288_15920 957dfc39bbb801cae2d10c67f77c8f3f 414 SUPERFAMILY SSF141868 2 196 4.05E-28 T 12-10-2018 IPR035919 EAL domain superfamily N288_15920 957dfc39bbb801cae2d10c67f77c8f3f 414 Gene3D G3DSA:3.20.20.450 38 197 7.9E-21 T 12-10-2018 IPR035919 EAL domain superfamily N288_15920 957dfc39bbb801cae2d10c67f77c8f3f 414 Pfam PF08668 HDOD domain 202 326 2.8E-17 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD N288_15920 957dfc39bbb801cae2d10c67f77c8f3f 414 Pfam PF00563 EAL domain 45 193 1.7E-18 T 12-10-2018 IPR001633 EAL domain N288_15920 957dfc39bbb801cae2d10c67f77c8f3f 414 Gene3D G3DSA:1.10.3210.10 198 373 2.0E-24 T 12-10-2018 N288_15920 957dfc39bbb801cae2d10c67f77c8f3f 414 SUPERFAMILY SSF109604 184 406 6.91E-45 T 12-10-2018 N288_21850 b48dd8b405a01f25203f0852f9bec592 433 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 321 350 2.2E-9 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 N288_21850 b48dd8b405a01f25203f0852f9bec592 433 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 398 2.2E-9 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 N288_21850 b48dd8b405a01f25203f0852f9bec592 433 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 208 237 2.2E-9 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 N288_21850 b48dd8b405a01f25203f0852f9bec592 433 SUPERFAMILY SSF46458 31 176 1.12E-18 T 12-10-2018 IPR009050 Globin-like superfamily N288_21850 b48dd8b405a01f25203f0852f9bec592 433 Gene3D G3DSA:1.10.287.950 173 433 1.5E-59 T 12-10-2018 N288_21850 b48dd8b405a01f25203f0852f9bec592 433 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 260 419 1.9E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_21850 b48dd8b405a01f25203f0852f9bec592 433 Gene3D G3DSA:1.10.490.10 23 172 8.8E-23 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 N288_21850 b48dd8b405a01f25203f0852f9bec592 433 Pfam PF11563 Protoglobin 32 183 1.3E-29 T 12-10-2018 N288_21850 b48dd8b405a01f25203f0852f9bec592 433 SUPERFAMILY SSF58104 200 430 2.09E-58 T 12-10-2018 N288_21850 b48dd8b405a01f25203f0852f9bec592 433 SMART SM00283 194 427 1.3E-37 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_04915 eaa7c296a599703721d2efb6ee6202b8 473 Gene3D G3DSA:1.20.1250.20 4 242 8.0E-65 T 12-10-2018 N288_04915 eaa7c296a599703721d2efb6ee6202b8 473 Gene3D G3DSA:1.20.1250.20 246 472 2.5E-66 T 12-10-2018 N288_04915 eaa7c296a599703721d2efb6ee6202b8 473 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 8 457 2.7E-128 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 N288_04915 eaa7c296a599703721d2efb6ee6202b8 473 ProSitePatterns PS00216 Sugar transport proteins signature 1. 322 339 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_04915 eaa7c296a599703721d2efb6ee6202b8 473 Pfam PF00083 Sugar (and other) transporter 15 461 4.9E-125 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 N288_04915 eaa7c296a599703721d2efb6ee6202b8 473 SUPERFAMILY SSF103473 8 458 1.05E-62 T 12-10-2018 IPR036259 MFS transporter superfamily N288_04915 eaa7c296a599703721d2efb6ee6202b8 473 PRINTS PR00171 Sugar transporter signature 386 398 1.1E-26 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 N288_04915 eaa7c296a599703721d2efb6ee6202b8 473 PRINTS PR00171 Sugar transporter signature 121 140 1.1E-26 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 N288_04915 eaa7c296a599703721d2efb6ee6202b8 473 PRINTS PR00171 Sugar transporter signature 278 288 1.1E-26 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 N288_04915 eaa7c296a599703721d2efb6ee6202b8 473 PRINTS PR00171 Sugar transporter signature 363 384 1.1E-26 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 N288_04915 eaa7c296a599703721d2efb6ee6202b8 473 PRINTS PR00171 Sugar transporter signature 22 32 1.1E-26 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 N288_04915 eaa7c296a599703721d2efb6ee6202b8 473 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_07970 4cf27dbcfd961a58eca1aa46824e759c 543 Gene3D G3DSA:3.10.105.10 298 516 3.9E-173 T 12-10-2018 N288_07970 4cf27dbcfd961a58eca1aa46824e759c 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 87 464 4.3E-90 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain N288_07970 4cf27dbcfd961a58eca1aa46824e759c 543 Gene3D G3DSA:3.40.190.10 55 530 3.9E-173 T 12-10-2018 N288_07970 4cf27dbcfd961a58eca1aa46824e759c 543 Gene3D G3DSA:3.90.76.10 76 198 3.9E-173 T 12-10-2018 N288_07970 4cf27dbcfd961a58eca1aa46824e759c 543 SUPERFAMILY SSF53850 40 536 8.69E-136 T 12-10-2018 N288_07970 4cf27dbcfd961a58eca1aa46824e759c 543 PIRSF PIRSF002741 1 542 2.3E-122 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 N288_07970 4cf27dbcfd961a58eca1aa46824e759c 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 92 114 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site N288_12140 6f3e264a9ea05b5f1e31e118e4ff142f 423 Gene3D G3DSA:3.20.20.80 131 410 6.0E-75 T 12-10-2018 N288_12140 6f3e264a9ea05b5f1e31e118e4ff142f 423 SUPERFAMILY SSF54106 54 99 1.7E-7 T 12-10-2018 N288_12140 6f3e264a9ea05b5f1e31e118e4ff142f 423 Gene3D G3DSA:3.10.50.10 322 376 6.0E-75 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily N288_12140 6f3e264a9ea05b5f1e31e118e4ff142f 423 Pfam PF01476 LysM domain 56 99 1.8E-7 T 12-10-2018 IPR018392 LysM domain N288_12140 6f3e264a9ea05b5f1e31e118e4ff142f 423 Pfam PF01476 LysM domain 4 47 1.5E-9 T 12-10-2018 IPR018392 LysM domain N288_12140 6f3e264a9ea05b5f1e31e118e4ff142f 423 Gene3D G3DSA:3.10.350.10 54 100 3.1E-11 T 12-10-2018 IPR036779 LysM domain superfamily N288_12140 6f3e264a9ea05b5f1e31e118e4ff142f 423 SUPERFAMILY SSF54106 3 47 6.93E-9 T 12-10-2018 N288_12140 6f3e264a9ea05b5f1e31e118e4ff142f 423 SUPERFAMILY SSF51445 120 419 7.27E-34 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_12140 6f3e264a9ea05b5f1e31e118e4ff142f 423 SMART SM00636 106 405 4.6E-7 T 12-10-2018 IPR011583 Chitinase II GO:0008061 N288_12140 6f3e264a9ea05b5f1e31e118e4ff142f 423 Gene3D G3DSA:3.10.350.10 2 53 5.9E-12 T 12-10-2018 IPR036779 LysM domain superfamily N288_12140 6f3e264a9ea05b5f1e31e118e4ff142f 423 Pfam PF00704 Glycosyl hydrolases family 18 194 403 9.2E-19 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 N288_12140 6f3e264a9ea05b5f1e31e118e4ff142f 423 SMART SM00257 55 99 1.1E-8 T 12-10-2018 IPR018392 LysM domain N288_12140 6f3e264a9ea05b5f1e31e118e4ff142f 423 SMART SM00257 3 47 2.0E-9 T 12-10-2018 IPR018392 LysM domain N288_10780 13c02b3c2acf5f609086935b95e0a7c5 331 Gene3D G3DSA:3.40.50.2300 159 288 7.5E-65 T 12-10-2018 N288_10780 13c02b3c2acf5f609086935b95e0a7c5 331 Pfam PF13377 Periplasmic binding protein-like domain 167 327 3.2E-35 T 12-10-2018 N288_10780 13c02b3c2acf5f609086935b95e0a7c5 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 N288_10780 13c02b3c2acf5f609086935b95e0a7c5 331 SUPERFAMILY SSF47413 1 59 4.81E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_10780 13c02b3c2acf5f609086935b95e0a7c5 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.5E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_10780 13c02b3c2acf5f609086935b95e0a7c5 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.5E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_10780 13c02b3c2acf5f609086935b95e0a7c5 331 SMART SM00354 1 71 1.8E-24 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_10780 13c02b3c2acf5f609086935b95e0a7c5 331 SUPERFAMILY SSF53822 70 328 4.71E-69 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_10780 13c02b3c2acf5f609086935b95e0a7c5 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.8E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_10780 13c02b3c2acf5f609086935b95e0a7c5 331 Gene3D G3DSA:3.40.50.2300 60 308 7.5E-65 T 12-10-2018 N288_10780 13c02b3c2acf5f609086935b95e0a7c5 331 Gene3D G3DSA:1.10.260.40 1 59 3.0E-21 T 12-10-2018 N288_17125 9eae90529e34007e8be5330c320af057 385 Gene3D G3DSA:2.40.50.140 273 358 5.3E-26 T 12-10-2018 N288_17125 9eae90529e34007e8be5330c320af057 385 Gene3D G3DSA:2.40.50.140 189 271 3.1E-29 T 12-10-2018 N288_17125 9eae90529e34007e8be5330c320af057 385 Gene3D G3DSA:2.40.50.140 8 100 7.0E-17 T 12-10-2018 N288_17125 9eae90529e34007e8be5330c320af057 385 SUPERFAMILY SSF50249 91 177 1.3E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_17125 9eae90529e34007e8be5330c320af057 385 SUPERFAMILY SSF50249 262 352 2.22E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_17125 9eae90529e34007e8be5330c320af057 385 PRINTS PR00681 Ribosomal protein S1 signature 157 177 6.6E-50 T 12-10-2018 N288_17125 9eae90529e34007e8be5330c320af057 385 PRINTS PR00681 Ribosomal protein S1 signature 111 127 6.6E-50 T 12-10-2018 N288_17125 9eae90529e34007e8be5330c320af057 385 PRINTS PR00681 Ribosomal protein S1 signature 22 40 6.6E-50 T 12-10-2018 N288_17125 9eae90529e34007e8be5330c320af057 385 PRINTS PR00681 Ribosomal protein S1 signature 128 145 6.6E-50 T 12-10-2018 N288_17125 9eae90529e34007e8be5330c320af057 385 PRINTS PR00681 Ribosomal protein S1 signature 214 235 6.6E-50 T 12-10-2018 N288_17125 9eae90529e34007e8be5330c320af057 385 PRINTS PR00681 Ribosomal protein S1 signature 292 311 6.6E-50 T 12-10-2018 N288_17125 9eae90529e34007e8be5330c320af057 385 PRINTS PR00681 Ribosomal protein S1 signature 87 106 6.6E-50 T 12-10-2018 N288_17125 9eae90529e34007e8be5330c320af057 385 PRINTS PR00681 Ribosomal protein S1 signature 331 349 6.6E-50 T 12-10-2018 N288_17125 9eae90529e34007e8be5330c320af057 385 SMART SM00316 106 173 2.1E-8 T 12-10-2018 IPR022967 RNA-binding domain, S1 N288_17125 9eae90529e34007e8be5330c320af057 385 SMART SM00316 20 90 1.3E-14 T 12-10-2018 IPR022967 RNA-binding domain, S1 N288_17125 9eae90529e34007e8be5330c320af057 385 SMART SM00316 277 348 1.1E-22 T 12-10-2018 IPR022967 RNA-binding domain, S1 N288_17125 9eae90529e34007e8be5330c320af057 385 SMART SM00316 192 262 4.1E-27 T 12-10-2018 IPR022967 RNA-binding domain, S1 N288_17125 9eae90529e34007e8be5330c320af057 385 Gene3D G3DSA:2.40.50.140 101 186 2.5E-12 T 12-10-2018 N288_17125 9eae90529e34007e8be5330c320af057 385 SUPERFAMILY SSF50249 2 115 1.06E-20 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_17125 9eae90529e34007e8be5330c320af057 385 Pfam PF00575 S1 RNA binding domain 19 89 2.9E-13 T 12-10-2018 IPR003029 S1 domain GO:0003676 N288_17125 9eae90529e34007e8be5330c320af057 385 Pfam PF00575 S1 RNA binding domain 276 348 2.4E-19 T 12-10-2018 IPR003029 S1 domain GO:0003676 N288_17125 9eae90529e34007e8be5330c320af057 385 Pfam PF00575 S1 RNA binding domain 192 262 4.4E-25 T 12-10-2018 IPR003029 S1 domain GO:0003676 N288_17125 9eae90529e34007e8be5330c320af057 385 Pfam PF00575 S1 RNA binding domain 104 173 7.7E-16 T 12-10-2018 IPR003029 S1 domain GO:0003676 N288_17125 9eae90529e34007e8be5330c320af057 385 SUPERFAMILY SSF50249 192 279 5.5E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_15330 f7a803c57bd31f8fecb873abd068affd 345 Pfam PF15632 ATP-grasp in the biosynthetic pathway with Ter operon 6 342 6.0E-120 T 12-10-2018 IPR011226 ATP-grasp family N288_15330 f7a803c57bd31f8fecb873abd068affd 345 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_15330 f7a803c57bd31f8fecb873abd068affd 345 Gene3D G3DSA:3.40.50.20 13 119 2.7E-6 T 12-10-2018 N288_15330 f7a803c57bd31f8fecb873abd068affd 345 SUPERFAMILY SSF56059 134 328 1.47E-21 T 12-10-2018 N288_15330 f7a803c57bd31f8fecb873abd068affd 345 Gene3D G3DSA:3.30.470.20 129 341 3.2E-15 T 12-10-2018 N288_10570 78415b1a9887c88b533f5b6ceb3ee7af 442 Gene3D G3DSA:3.40.50.720 1 170 8.5E-74 T 12-10-2018 N288_10570 78415b1a9887c88b533f5b6ceb3ee7af 442 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 2.1E-75 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 N288_10570 78415b1a9887c88b533f5b6ceb3ee7af 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 5.1E-53 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 N288_10570 78415b1a9887c88b533f5b6ceb3ee7af 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 5.1E-53 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 N288_10570 78415b1a9887c88b533f5b6ceb3ee7af 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 5.1E-53 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 N288_10570 78415b1a9887c88b533f5b6ceb3ee7af 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 5.1E-53 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 N288_10570 78415b1a9887c88b533f5b6ceb3ee7af 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 5.1E-53 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 N288_10570 78415b1a9887c88b533f5b6ceb3ee7af 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 5.1E-53 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 N288_10570 78415b1a9887c88b533f5b6ceb3ee7af 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 5.1E-53 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 N288_10570 78415b1a9887c88b533f5b6ceb3ee7af 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 412 7.9E-49 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 N288_10570 78415b1a9887c88b533f5b6ceb3ee7af 442 SUPERFAMILY SSF56327 173 439 2.24E-97 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 N288_10570 78415b1a9887c88b533f5b6ceb3ee7af 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 12-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 N288_10570 78415b1a9887c88b533f5b6ceb3ee7af 442 Gene3D G3DSA:3.90.110.10 171 442 8.4E-103 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 N288_10570 78415b1a9887c88b533f5b6ceb3ee7af 442 SUPERFAMILY SSF51735 4 168 1.1E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_01850 f5affaa06d609d45dad042f2d3c035dd 415 Pfam PF00375 Sodium:dicarboxylate symporter family 14 395 6.2E-104 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 N288_01850 f5affaa06d609d45dad042f2d3c035dd 415 Gene3D G3DSA:1.10.3860.10 1 412 9.9E-91 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 N288_01850 f5affaa06d609d45dad042f2d3c035dd 415 SUPERFAMILY SSF118215 11 395 2.35E-91 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 N288_01850 f5affaa06d609d45dad042f2d3c035dd 415 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 1.7E-20 T 12-10-2018 N288_01850 f5affaa06d609d45dad042f2d3c035dd 415 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 1.7E-20 T 12-10-2018 N288_01850 f5affaa06d609d45dad042f2d3c035dd 415 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 1.7E-20 T 12-10-2018 N288_01850 f5affaa06d609d45dad042f2d3c035dd 415 PRINTS PR00173 Glutamate-aspartate symporter signature 138 160 1.7E-20 T 12-10-2018 N288_01850 f5affaa06d609d45dad042f2d3c035dd 415 PRINTS PR00173 Glutamate-aspartate symporter signature 350 370 1.7E-20 T 12-10-2018 N288_06335 145e82ded57500724b805291abcad567 288 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 1.8E-17 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_06335 145e82ded57500724b805291abcad567 288 Gene3D G3DSA:1.10.357.10 1 194 1.5E-29 T 12-10-2018 N288_06335 145e82ded57500724b805291abcad567 288 SUPERFAMILY SSF46689 3 66 1.33E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_06335 145e82ded57500724b805291abcad567 288 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 9.2E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_06335 145e82ded57500724b805291abcad567 288 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 9.2E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_24190 2ab1c99f5d7feacd274c00157d202536 220 Pfam PF08713 DNA alkylation repair enzyme 7 219 1.3E-65 T 12-10-2018 IPR014825 DNA alkylation repair enzyme N288_24190 2ab1c99f5d7feacd274c00157d202536 220 Gene3D G3DSA:1.25.10.90 1 220 2.7E-80 T 12-10-2018 N288_24190 2ab1c99f5d7feacd274c00157d202536 220 SUPERFAMILY SSF48371 12 219 4.89E-53 T 12-10-2018 IPR016024 Armadillo-type fold N288_19110 23cbfeb9d9589bbb0228423a827f1732 553 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 40 145 5.4E-25 T 12-10-2018 IPR007831 General secretory system II, protein E, N-terminal N288_19110 23cbfeb9d9589bbb0228423a827f1732 553 SUPERFAMILY SSF52540 168 549 3.43E-96 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_19110 23cbfeb9d9589bbb0228423a827f1732 553 SUPERFAMILY SSF160246 3 142 6.54E-43 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily N288_19110 23cbfeb9d9589bbb0228423a827f1732 553 SMART SM00382 305 428 0.0031 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_19110 23cbfeb9d9589bbb0228423a827f1732 553 Pfam PF00437 Type II/IV secretion system protein 182 444 1.1E-79 T 12-10-2018 IPR001482 Type II/IV secretion system protein N288_19110 23cbfeb9d9589bbb0228423a827f1732 553 Gene3D G3DSA:3.40.50.300 280 552 2.0E-113 T 12-10-2018 N288_19110 23cbfeb9d9589bbb0228423a827f1732 553 Gene3D G3DSA:3.30.450.90 143 277 3.1E-46 T 12-10-2018 N288_19110 23cbfeb9d9589bbb0228423a827f1732 553 Gene3D G3DSA:3.30.300.160 64 142 6.0E-15 T 12-10-2018 N288_07585 3bb8a0dd136ecbe6e6db28f7b5776fea 577 Gene3D G3DSA:3.40.190.10 25 305 4.8E-59 T 12-10-2018 N288_07585 3bb8a0dd136ecbe6e6db28f7b5776fea 577 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 488 1.1E-84 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain N288_07585 3bb8a0dd136ecbe6e6db28f7b5776fea 577 SUPERFAMILY SSF53850 48 575 2.71E-119 T 12-10-2018 N288_07585 3bb8a0dd136ecbe6e6db28f7b5776fea 577 PIRSF PIRSF002741 1 577 2.7E-98 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 N288_07585 3bb8a0dd136ecbe6e6db28f7b5776fea 577 Gene3D G3DSA:3.10.105.10 306 543 3.8E-68 T 12-10-2018 N288_07585 3bb8a0dd136ecbe6e6db28f7b5776fea 577 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 99 120 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site N288_06970 364db97c4bcd5d9cc16d6ad6f443da33 268 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 154 265 7.3E-32 T 12-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF N288_06970 364db97c4bcd5d9cc16d6ad6f443da33 268 PIRSF PIRSF031509 2 268 2.1E-34 T 12-10-2018 IPR016975 Cell wall-active antibiotic response protein GO:0016021 N288_14215 cb793b6400e6c629ad554132aae5b01e 555 PIRSF PIRSF004803 1 555 1.7E-225 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 N288_14215 cb793b6400e6c629ad554132aae5b01e 555 SUPERFAMILY SSF56281 8 424 1.03E-94 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_14215 cb793b6400e6c629ad554132aae5b01e 555 SMART SM00849 18 212 3.0E-26 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_14215 cb793b6400e6c629ad554132aae5b01e 555 Hamap MF_01491 Ribonuclease J [rnj]. 1 555 44.576 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 N288_14215 cb793b6400e6c629ad554132aae5b01e 555 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 363 407 4.9E-10 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain N288_14215 cb793b6400e6c629ad554132aae5b01e 555 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 364 392 - T 12-10-2018 IPR001587 Ribonuclease J, conserved site N288_14215 cb793b6400e6c629ad554132aae5b01e 555 Gene3D G3DSA:3.60.15.10 8 436 9.5E-174 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_14215 cb793b6400e6c629ad554132aae5b01e 555 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 6 553 5.1E-186 T 12-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 N288_14215 cb793b6400e6c629ad554132aae5b01e 555 Gene3D G3DSA:3.10.20.580 449 555 3.3E-36 T 12-10-2018 N288_14215 cb793b6400e6c629ad554132aae5b01e 555 Pfam PF00753 Metallo-beta-lactamase superfamily 18 93 7.2E-14 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_14215 cb793b6400e6c629ad554132aae5b01e 555 Gene3D G3DSA:3.40.50.10710 205 365 9.5E-174 T 12-10-2018 N288_17775 7b1f9349e83c2463c70ca70392b4ed0c 262 SUPERFAMILY SSF52172 2 125 4.41E-32 T 12-10-2018 IPR011006 CheY-like superfamily N288_17775 7b1f9349e83c2463c70ca70392b4ed0c 262 TIGRFAM TIGR02875 spore_0_A: sporulation transcription factor Spo0A 3 262 1.2E-133 T 12-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 N288_17775 7b1f9349e83c2463c70ca70392b4ed0c 262 PIRSF PIRSF002937 1 262 9.4E-133 T 12-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 N288_17775 7b1f9349e83c2463c70ca70392b4ed0c 262 ProDom PD010908 TRANSCRIPTION SPORULATION TWO-COMPONENT DNA-BINDING PHOSPHORYLATION SENSORY REGULATION TRANSDUCTION METAL-BINDING CALCIUM 151 261 6.0E-59 T 12-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 N288_17775 7b1f9349e83c2463c70ca70392b4ed0c 262 Pfam PF00072 Response regulator receiver domain 6 119 7.2E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_17775 7b1f9349e83c2463c70ca70392b4ed0c 262 Gene3D G3DSA:1.10.10.10 147 262 2.5E-55 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_17775 7b1f9349e83c2463c70ca70392b4ed0c 262 Pfam PF08769 Sporulation initiation factor Spo0A C terminal 152 255 3.0E-45 T 12-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 N288_17775 7b1f9349e83c2463c70ca70392b4ed0c 262 Gene3D G3DSA:3.40.50.2300 1 146 2.9E-32 T 12-10-2018 N288_17775 7b1f9349e83c2463c70ca70392b4ed0c 262 SUPERFAMILY SSF46894 146 260 1.45E-48 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_17775 7b1f9349e83c2463c70ca70392b4ed0c 262 SMART SM00448 4 119 8.4E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_24740 01ad389175f40ae740ccf7e398b2aeae 238 Gene3D G3DSA:3.40.1410.10 89 227 6.1E-26 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily N288_24740 01ad389175f40ae740ccf7e398b2aeae 238 SMART SM00866 89 228 2.5E-21 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 N288_24740 01ad389175f40ae740ccf7e398b2aeae 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 3.2E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_24740 01ad389175f40ae740ccf7e398b2aeae 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 3.2E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_24740 01ad389175f40ae740ccf7e398b2aeae 238 SUPERFAMILY SSF46785 3 71 4.12E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_24740 01ad389175f40ae740ccf7e398b2aeae 238 SUPERFAMILY SSF64288 73 233 5.65E-36 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily N288_24740 01ad389175f40ae740ccf7e398b2aeae 238 Gene3D G3DSA:1.10.10.10 1 67 6.7E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_24740 01ad389175f40ae740ccf7e398b2aeae 238 SMART SM00345 8 67 1.6E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_24740 01ad389175f40ae740ccf7e398b2aeae 238 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 4 235 2.0E-86 T 12-10-2018 IPR012770 Trehalose operon transcriptional repressor N288_24740 01ad389175f40ae740ccf7e398b2aeae 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 1.5E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_24740 01ad389175f40ae740ccf7e398b2aeae 238 Pfam PF07702 UTRA domain 96 228 1.6E-27 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 N288_09780 bb131f05feaf3cd9176e85af6ff9b4df 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.6E-31 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 N288_09780 bb131f05feaf3cd9176e85af6ff9b4df 89 PIRSF PIRSF004669 1 89 8.9E-36 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 N288_09780 bb131f05feaf3cd9176e85af6ff9b4df 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.0E-34 T 12-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 N288_09780 bb131f05feaf3cd9176e85af6ff9b4df 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.4E-23 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 N288_09780 bb131f05feaf3cd9176e85af6ff9b4df 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.4E-23 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 N288_09780 bb131f05feaf3cd9176e85af6ff9b4df 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.4E-23 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 N288_12110 923072968dd690322851b9b24860a755 246 SUPERFAMILY SSF52091 156 243 5.23E-5 T 12-10-2018 IPR036513 STAS domain superfamily N288_12110 923072968dd690322851b9b24860a755 246 Gene3D G3DSA:3.30.450.20 3 118 1.9E-19 T 12-10-2018 N288_12110 923072968dd690322851b9b24860a755 246 Pfam PF01740 STAS domain 125 237 8.1E-6 T 12-10-2018 IPR002645 STAS domain N288_12110 923072968dd690322851b9b24860a755 246 SUPERFAMILY SSF55785 5 114 4.58E-16 T 12-10-2018 IPR035965 PAS domain superfamily N288_12110 923072968dd690322851b9b24860a755 246 Pfam PF13426 PAS domain 13 111 5.4E-10 T 12-10-2018 IPR000014 PAS domain N288_12110 923072968dd690322851b9b24860a755 246 Gene3D G3DSA:3.30.750.24 125 245 2.7E-22 T 12-10-2018 IPR036513 STAS domain superfamily N288_12110 923072968dd690322851b9b24860a755 246 SMART SM00091 1 68 2.9E-4 T 12-10-2018 IPR000014 PAS domain N288_12110 923072968dd690322851b9b24860a755 246 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 118 1.4E-11 T 12-10-2018 IPR000014 PAS domain N288_05770 772229e9c17a915a77509ad485c4a2f4 316 Gene3D G3DSA:3.40.50.720 94 274 1.4E-90 T 12-10-2018 N288_05770 772229e9c17a915a77509ad485c4a2f4 316 SUPERFAMILY SSF52283 32 116 2.98E-15 T 12-10-2018 N288_05770 772229e9c17a915a77509ad485c4a2f4 316 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 278 3.2E-46 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 N288_05770 772229e9c17a915a77509ad485c4a2f4 316 Gene3D G3DSA:3.40.50.720 15 303 1.4E-90 T 12-10-2018 N288_05770 772229e9c17a915a77509ad485c4a2f4 316 SUPERFAMILY SSF51735 98 278 9.65E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_05770 772229e9c17a915a77509ad485c4a2f4 316 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 26 301 1.2E-13 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 N288_15090 81629653e3a1cae802bb2912f99d5b03 317 Pfam PF12679 ABC-2 family transporter protein 4 315 1.3E-22 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 N288_15130 cdeacef463a6a3dfc176ada1cc62b5e1 273 Pfam PF01740 STAS domain 162 266 1.9E-7 T 12-10-2018 IPR002645 STAS domain N288_15130 cdeacef463a6a3dfc176ada1cc62b5e1 273 SUPERFAMILY SSF52091 161 271 5.1E-14 T 12-10-2018 IPR036513 STAS domain superfamily N288_15130 cdeacef463a6a3dfc176ada1cc62b5e1 273 Gene3D G3DSA:3.30.750.24 157 273 6.9E-33 T 12-10-2018 IPR036513 STAS domain superfamily N288_17685 8e76fd81c6dca8279fa60ff81c5457b8 223 Gene3D G3DSA:1.10.3720.10 5 223 6.8E-57 T 12-10-2018 IPR035906 MetI-like superfamily N288_17685 8e76fd81c6dca8279fa60ff81c5457b8 223 SUPERFAMILY SSF161098 17 221 1.7E-44 T 12-10-2018 IPR035906 MetI-like superfamily N288_17685 8e76fd81c6dca8279fa60ff81c5457b8 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 221 9.3E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_17685 8e76fd81c6dca8279fa60ff81c5457b8 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 114 5.8E-28 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 N288_03210 91e19096addcede658d8084ac501dabf 594 Gene3D G3DSA:2.60.40.10 43 138 4.2E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_03210 91e19096addcede658d8084ac501dabf 594 Gene3D G3DSA:2.60.40.1180 473 594 6.8E-28 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_03210 91e19096addcede658d8084ac501dabf 594 Pfam PF13199 Glycosyl hydrolase family 66 53 591 3.8E-195 T 12-10-2018 IPR025092 Glycosyl hydrolase family 66 N288_03210 91e19096addcede658d8084ac501dabf 594 SUPERFAMILY SSF51445 215 399 5.57E-6 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_03210 91e19096addcede658d8084ac501dabf 594 Gene3D G3DSA:3.20.20.80 139 472 6.0E-112 T 12-10-2018 N288_15970 327bbddf917f9d60758be3b4828dc2c8 324 SUPERFAMILY SSF52151 46 318 4.19E-47 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase N288_15970 327bbddf917f9d60758be3b4828dc2c8 324 Pfam PF01734 Patatin-like phospholipase 48 212 1.4E-21 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 N288_15970 327bbddf917f9d60758be3b4828dc2c8 324 Gene3D G3DSA:3.40.1090.10 34 129 4.5E-15 T 12-10-2018 N288_04410 77d129160bcd3e6a45ce47efe81dd2de 259 Gene3D G3DSA:1.10.10.10 6 116 2.3E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_04410 77d129160bcd3e6a45ce47efe81dd2de 259 Pfam PF09382 RQC domain 20 102 2.4E-7 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 N288_04410 77d129160bcd3e6a45ce47efe81dd2de 259 Pfam PF13451 Probable zinc-ribbon domain 210 250 2.1E-13 T 12-10-2018 IPR025306 Probable zinc-binding domain N288_04410 77d129160bcd3e6a45ce47efe81dd2de 259 SUPERFAMILY SSF46785 17 110 2.18E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_19595 1b623199c19372ca8d90d1396db2ad42 312 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 5 311 7.3E-165 T 12-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 N288_19595 1b623199c19372ca8d90d1396db2ad42 312 PIRSF PIRSF000102 2 311 1.1E-105 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 N288_19595 1b623199c19372ca8d90d1396db2ad42 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 152 309 2.2E-27 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 N288_19595 1b623199c19372ca8d90d1396db2ad42 312 Gene3D G3DSA:3.90.110.10 150 310 3.0E-63 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 N288_19595 1b623199c19372ca8d90d1396db2ad42 312 SUPERFAMILY SSF56327 150 310 1.38E-53 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 N288_19595 1b623199c19372ca8d90d1396db2ad42 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 147 4.1E-41 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 N288_19595 1b623199c19372ca8d90d1396db2ad42 312 Hamap MF_00487 Malate dehydrogenase [mdh]. 6 312 46.917 T 12-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 N288_19595 1b623199c19372ca8d90d1396db2ad42 312 PRINTS PR00086 L-lactate dehydrogenase signature 121 141 1.7E-29 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 N288_19595 1b623199c19372ca8d90d1396db2ad42 312 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 1.7E-29 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 N288_19595 1b623199c19372ca8d90d1396db2ad42 312 PRINTS PR00086 L-lactate dehydrogenase signature 175 188 1.7E-29 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 N288_19595 1b623199c19372ca8d90d1396db2ad42 312 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 1.7E-29 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 N288_19595 1b623199c19372ca8d90d1396db2ad42 312 PRINTS PR00086 L-lactate dehydrogenase signature 145 163 1.7E-29 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 N288_19595 1b623199c19372ca8d90d1396db2ad42 312 Gene3D G3DSA:3.40.50.720 1 149 1.1E-60 T 12-10-2018 N288_19595 1b623199c19372ca8d90d1396db2ad42 312 SUPERFAMILY SSF51735 3 147 5.17E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_18680 26987ccc82e44fcbd461d7dc4909111a 230 Pfam PF07423 Protein of unknown function (DUF1510) 12 226 8.9E-79 T 12-10-2018 IPR009988 Protein of unknown function DUF1510 N288_15985 17fbc9ca69f5d5726ca7feac44cb2694 195 Pfam PF09335 SNARE associated Golgi protein 29 154 1.3E-23 T 12-10-2018 IPR032816 SNARE associated Golgi protein N288_01465 30890d83bf2f8756bdecb0c7c1bbff74 230 Pfam PF12146 Serine aminopeptidase, S33 7 210 4.9E-14 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 N288_01465 30890d83bf2f8756bdecb0c7c1bbff74 230 Gene3D G3DSA:3.40.50.1820 3 228 8.8E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_01465 30890d83bf2f8756bdecb0c7c1bbff74 230 PIRSF PIRSF017388 1 230 2.8E-61 T 12-10-2018 IPR012354 Esterase/lipase GO:0052689 N288_01465 30890d83bf2f8756bdecb0c7c1bbff74 230 SUPERFAMILY SSF53474 5 227 1.46E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_23445 57d626464ce77057e578967bb63fc7c0 1466 Gene3D G3DSA:2.60.40.1710 655 806 6.6E-35 T 12-10-2018 N288_23445 57d626464ce77057e578967bb63fc7c0 1466 SUPERFAMILY SSF52743 154 653 1.7E-65 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 N288_23445 57d626464ce77057e578967bb63fc7c0 1466 Gene3D G3DSA:3.50.30.30 389 573 5.9E-164 T 12-10-2018 N288_23445 57d626464ce77057e578967bb63fc7c0 1466 Pfam PF02225 PA domain 427 503 4.1E-13 T 12-10-2018 IPR003137 PA domain N288_23445 57d626464ce77057e578967bb63fc7c0 1466 Pfam PF00395 S-layer homology domain 1283 1325 1.7E-11 T 12-10-2018 IPR001119 S-layer homology domain N288_23445 57d626464ce77057e578967bb63fc7c0 1466 Pfam PF00395 S-layer homology domain 1343 1386 1.1E-7 T 12-10-2018 IPR001119 S-layer homology domain N288_23445 57d626464ce77057e578967bb63fc7c0 1466 Pfam PF00395 S-layer homology domain 1409 1453 4.6E-10 T 12-10-2018 IPR001119 S-layer homology domain N288_23445 57d626464ce77057e578967bb63fc7c0 1466 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 249 259 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site N288_23445 57d626464ce77057e578967bb63fc7c0 1466 Pfam PF00082 Subtilase family 174 642 6.2E-59 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 N288_23445 57d626464ce77057e578967bb63fc7c0 1466 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 179 190 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site N288_23445 57d626464ce77057e578967bb63fc7c0 1466 Pfam PF06280 Fn3-like domain 666 798 1.8E-31 T 12-10-2018 IPR010435 Fn3-like domain GO:0004252|GO:0005618|GO:0016020 N288_23445 57d626464ce77057e578967bb63fc7c0 1466 SUPERFAMILY SSF52025 417 513 2.88E-13 T 12-10-2018 N288_23445 57d626464ce77057e578967bb63fc7c0 1466 PRINTS PR00723 Subtilisin serine protease family (S8) signature 174 193 4.9E-18 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_23445 57d626464ce77057e578967bb63fc7c0 1466 PRINTS PR00723 Subtilisin serine protease family (S8) signature 245 258 4.9E-18 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_23445 57d626464ce77057e578967bb63fc7c0 1466 PRINTS PR00723 Subtilisin serine protease family (S8) signature 572 588 4.9E-18 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_23445 57d626464ce77057e578967bb63fc7c0 1466 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 573 583 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site N288_23445 57d626464ce77057e578967bb63fc7c0 1466 Gene3D G3DSA:3.40.50.200 173 646 5.9E-164 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 N288_22980 ebcf3e9a9d0e1282ebe8a758d1a40bb2 287 Gene3D G3DSA:1.10.1040.10 165 285 6.4E-33 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 N288_22980 ebcf3e9a9d0e1282ebe8a758d1a40bb2 287 SUPERFAMILY SSF48179 166 281 3.85E-28 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_22980 ebcf3e9a9d0e1282ebe8a758d1a40bb2 287 PIRSF PIRSF000103 1 284 1.2E-65 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 N288_22980 ebcf3e9a9d0e1282ebe8a758d1a40bb2 287 SUPERFAMILY SSF51735 4 165 1.97E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_22980 ebcf3e9a9d0e1282ebe8a758d1a40bb2 287 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 164 3.1E-44 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 N288_22980 ebcf3e9a9d0e1282ebe8a758d1a40bb2 287 Gene3D G3DSA:3.40.50.720 1 164 1.1E-47 T 12-10-2018 N288_22980 ebcf3e9a9d0e1282ebe8a758d1a40bb2 287 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 8 21 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 N288_22980 ebcf3e9a9d0e1282ebe8a758d1a40bb2 287 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 280 1.5E-30 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 N288_20055 c65d648b243f113e06dd6cb6f5aa4658 185 Pfam PF13563 2'-5' RNA ligase superfamily 36 166 3.6E-15 T 12-10-2018 N288_20055 c65d648b243f113e06dd6cb6f5aa4658 185 Gene3D G3DSA:3.90.1140.10 4 185 3.9E-40 T 12-10-2018 N288_20055 c65d648b243f113e06dd6cb6f5aa4658 185 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 4 184 4.5E-41 T 12-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 N288_20055 c65d648b243f113e06dd6cb6f5aa4658 185 SUPERFAMILY SSF55144 4 184 5.76E-36 T 12-10-2018 IPR009097 Cyclic phosphodiesterase N288_20055 c65d648b243f113e06dd6cb6f5aa4658 185 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 3 184 20.667 T 12-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 N288_03295 534e0446fbc12fbba6bfd4d45ecedd01 246 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 131 243 5.5E-43 T 12-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF N288_03295 534e0446fbc12fbba6bfd4d45ecedd01 246 PIRSF PIRSF031509 4 246 1.9E-62 T 12-10-2018 IPR016975 Cell wall-active antibiotic response protein GO:0016021 N288_21925 27a66de5c4063c727ee5d300b0d4235d 328 Gene3D G3DSA:3.30.70.1660 90 319 2.5E-99 T 12-10-2018 N288_21925 27a66de5c4063c727ee5d300b0d4235d 328 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 326 37.537 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 N288_21925 27a66de5c4063c727ee5d300b0d4235d 328 SMART SM00937 45 155 4.0E-59 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 N288_21925 27a66de5c4063c727ee5d300b0d4235d 328 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 205 221 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 N288_21925 27a66de5c4063c727ee5d300b0d4235d 328 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 325 3.1E-165 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 N288_21925 27a66de5c4063c727ee5d300b0d4235d 328 Pfam PF00472 RF-1 domain 188 298 1.8E-43 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 N288_21925 27a66de5c4063c727ee5d300b0d4235d 328 SUPERFAMILY SSF75620 2 324 4.05E-135 T 12-10-2018 N288_21925 27a66de5c4063c727ee5d300b0d4235d 328 Pfam PF03462 PCRF domain 3 179 2.0E-60 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 N288_21925 27a66de5c4063c727ee5d300b0d4235d 328 Gene3D G3DSA:1.20.58.410 1 76 1.3E-15 T 12-10-2018 N288_21925 27a66de5c4063c727ee5d300b0d4235d 328 Gene3D G3DSA:3.30.160.20 186 281 2.5E-99 T 12-10-2018 N288_14725 9229a67668d04581313ab0324f2ce9f2 206 Pfam PF02698 DUF218 domain 35 149 1.0E-21 T 12-10-2018 IPR003848 Domain of unknown function DUF218 N288_14725 9229a67668d04581313ab0324f2ce9f2 206 Gene3D G3DSA:3.40.50.620 70 159 2.5E-6 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_10295 d56e437e5d5f1a8bfb5f74ff2e8005dc 370 Gene3D G3DSA:3.40.50.2000 45 355 2.3E-60 T 12-10-2018 N288_10295 d56e437e5d5f1a8bfb5f74ff2e8005dc 370 Pfam PF13439 Glycosyltransferase Family 4 53 170 8.4E-10 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 N288_10295 d56e437e5d5f1a8bfb5f74ff2e8005dc 370 SUPERFAMILY SSF53756 37 364 1.1E-64 T 12-10-2018 N288_10295 d56e437e5d5f1a8bfb5f74ff2e8005dc 370 Pfam PF00534 Glycosyl transferases group 1 185 339 6.3E-34 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 N288_10295 d56e437e5d5f1a8bfb5f74ff2e8005dc 370 Gene3D G3DSA:3.40.50.2000 167 346 2.3E-60 T 12-10-2018 N288_21210 caa8cfc5f68a341be37cad7bd6cde9a3 391 Pfam PF02803 Thiolase, C-terminal domain 268 389 1.6E-49 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 N288_21210 caa8cfc5f68a341be37cad7bd6cde9a3 391 SUPERFAMILY SSF53901 269 390 3.36E-44 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_21210 caa8cfc5f68a341be37cad7bd6cde9a3 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 5.8E-144 T 12-10-2018 IPR002155 Thiolase GO:0016747 N288_21210 caa8cfc5f68a341be37cad7bd6cde9a3 391 PIRSF PIRSF000429 1 391 2.4E-135 T 12-10-2018 IPR002155 Thiolase GO:0016747 N288_21210 caa8cfc5f68a341be37cad7bd6cde9a3 391 Gene3D G3DSA:3.40.47.10 5 274 9.3E-151 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_21210 caa8cfc5f68a341be37cad7bd6cde9a3 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 N288_21210 caa8cfc5f68a341be37cad7bd6cde9a3 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 N288_21210 caa8cfc5f68a341be37cad7bd6cde9a3 391 Gene3D G3DSA:3.40.47.10 131 387 9.3E-151 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_21210 caa8cfc5f68a341be37cad7bd6cde9a3 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 N288_21210 caa8cfc5f68a341be37cad7bd6cde9a3 391 SUPERFAMILY SSF53901 1 264 7.32E-77 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_21210 caa8cfc5f68a341be37cad7bd6cde9a3 391 Pfam PF00108 Thiolase, N-terminal domain 5 260 4.9E-78 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 N288_10565 79cee3013a841f735002f93d1ddc5cf0 109 SUPERFAMILY SSF46973 3 99 4.58E-35 T 12-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 N288_10565 79cee3013a841f735002f93d1ddc5cf0 109 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 99 4.5E-37 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 N288_10565 79cee3013a841f735002f93d1ddc5cf0 109 Gene3D G3DSA:1.20.58.280 1 104 2.8E-39 T 12-10-2018 N288_10565 79cee3013a841f735002f93d1ddc5cf0 109 PIRSF PIRSF000699 1 104 2.4E-36 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 N288_04470 3af0da8c4a576a45da9bc597f729d01e 187 Gene3D G3DSA:3.30.40.60 88 160 3.8E-9 T 12-10-2018 N288_07185 1006f61027677f372482a49f1165cf51 390 Pfam PF02803 Thiolase, C-terminal domain 268 390 6.8E-47 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 N288_07185 1006f61027677f372482a49f1165cf51 390 SUPERFAMILY SSF53901 4 268 4.64E-87 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_07185 1006f61027677f372482a49f1165cf51 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 2.3E-149 T 12-10-2018 IPR002155 Thiolase GO:0016747 N288_07185 1006f61027677f372482a49f1165cf51 390 SUPERFAMILY SSF53901 269 390 3.69E-41 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_07185 1006f61027677f372482a49f1165cf51 390 Gene3D G3DSA:3.40.47.10 126 387 7.4E-162 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_07185 1006f61027677f372482a49f1165cf51 390 PIRSF PIRSF000429 1 390 1.2E-135 T 12-10-2018 IPR002155 Thiolase GO:0016747 N288_07185 1006f61027677f372482a49f1165cf51 390 Pfam PF00108 Thiolase, N-terminal domain 4 261 8.1E-87 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 N288_07185 1006f61027677f372482a49f1165cf51 390 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 N288_07185 1006f61027677f372482a49f1165cf51 390 Gene3D G3DSA:3.40.47.10 5 274 7.4E-162 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_00410 17f3f838ff492cdaa37f0c1a081c60b4 825 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 620 805 4.4E-35 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_00410 17f3f838ff492cdaa37f0c1a081c60b4 825 SUPERFAMILY SSF81606 597 805 2.62E-20 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_00410 17f3f838ff492cdaa37f0c1a081c60b4 825 TIGRFAM TIGR02865 spore_II_E: stage II sporulation protein E 44 805 9.5E-269 T 12-10-2018 IPR014221 Sporulation stage II, protein E KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_00410 17f3f838ff492cdaa37f0c1a081c60b4 825 Gene3D G3DSA:3.60.40.10 587 825 1.5E-52 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_00410 17f3f838ff492cdaa37f0c1a081c60b4 825 SMART SM00331 593 805 7.8E-51 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_00410 17f3f838ff492cdaa37f0c1a081c60b4 825 SMART SM00332 572 803 1.2E-4 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_13895 801fac010c1839efd6f6ed0701b1b937 398 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 N288_13895 801fac010c1839efd6f6ed0701b1b937 398 Gene3D G3DSA:1.20.1090.10 186 389 1.0E-64 T 12-10-2018 N288_13895 801fac010c1839efd6f6ed0701b1b937 398 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 376 2.9E-117 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 N288_13895 801fac010c1839efd6f6ed0701b1b937 398 SUPERFAMILY SSF56796 6 386 1.57E-118 T 12-10-2018 N288_13895 801fac010c1839efd6f6ed0701b1b937 398 Gene3D G3DSA:3.40.50.1970 1 185 1.6E-54 T 12-10-2018 N288_17310 632223220fb50cde92a6fbec9ee8f7f1 551 Pfam PF05140 ResB-like family 439 519 1.3E-18 T 12-10-2018 IPR007816 ResB-like domain N288_17310 632223220fb50cde92a6fbec9ee8f7f1 551 Pfam PF05140 ResB-like family 65 430 6.3E-73 T 12-10-2018 IPR007816 ResB-like domain N288_11185 7b9aa47bb2c137892aec91fdd43523bb 426 Gene3D G3DSA:1.20.1250.20 29 222 2.0E-15 T 12-10-2018 N288_11185 7b9aa47bb2c137892aec91fdd43523bb 426 Gene3D G3DSA:1.20.1250.20 226 418 4.6E-17 T 12-10-2018 N288_11185 7b9aa47bb2c137892aec91fdd43523bb 426 Pfam PF13347 MFS/sugar transport protein 31 388 7.5E-12 T 12-10-2018 N288_11185 7b9aa47bb2c137892aec91fdd43523bb 426 SUPERFAMILY SSF103473 36 413 2.01E-39 T 12-10-2018 IPR036259 MFS transporter superfamily N288_05925 82498432d9c5e22e09d4e3d89dce578f 342 Gene3D G3DSA:3.40.50.720 7 315 1.4E-101 T 12-10-2018 N288_05925 82498432d9c5e22e09d4e3d89dce578f 342 Gene3D G3DSA:3.30.360.10 128 337 1.4E-101 T 12-10-2018 N288_05925 82498432d9c5e22e09d4e3d89dce578f 342 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 308 324 5.7E-5 T 12-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 N288_05925 82498432d9c5e22e09d4e3d89dce578f 342 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 113 127 5.7E-5 T 12-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 N288_05925 82498432d9c5e22e09d4e3d89dce578f 342 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 2 15 5.7E-5 T 12-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 N288_05925 82498432d9c5e22e09d4e3d89dce578f 342 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 237 2.6E-4 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 N288_05925 82498432d9c5e22e09d4e3d89dce578f 342 SUPERFAMILY SSF51735 3 155 1.21E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_05925 82498432d9c5e22e09d4e3d89dce578f 342 SUPERFAMILY SSF55347 129 289 4.91E-30 T 12-10-2018 N288_05925 82498432d9c5e22e09d4e3d89dce578f 342 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 123 5.2E-35 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 N288_09205 4eb32a401a70809dfac18f30a82848a5 367 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 189 353 2.4E-43 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 N288_09205 4eb32a401a70809dfac18f30a82848a5 367 SUPERFAMILY SSF53756 1 363 1.61E-112 T 12-10-2018 N288_09205 4eb32a401a70809dfac18f30a82848a5 367 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 362 35.326 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_09205 4eb32a401a70809dfac18f30a82848a5 367 Gene3D G3DSA:3.40.50.2000 1 175 8.4E-64 T 12-10-2018 N288_09205 4eb32a401a70809dfac18f30a82848a5 367 Gene3D G3DSA:3.40.50.2000 176 346 1.9E-51 T 12-10-2018 N288_09205 4eb32a401a70809dfac18f30a82848a5 367 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 355 3.4E-107 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_09205 4eb32a401a70809dfac18f30a82848a5 367 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 142 4.2E-49 T 12-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_24075 508860e2992ee7ee3e03af0fd67918fd 93 Pfam PF17261 Family of unknown function (DUF5327) 1 93 5.8E-28 T 12-10-2018 IPR035218 Protein of unknown function DUF5327 N288_24075 508860e2992ee7ee3e03af0fd67918fd 93 ProDom PD705231 YWDI GROUP-SPECIFIC 1 93 2.0E-7 T 12-10-2018 IPR035218 Protein of unknown function DUF5327 N288_02815 ed85613e3c3be7a1174d2f8f1bd8e83d 157 Pfam PF05360 yiaA/B two helix domain 96 149 2.2E-20 T 12-10-2018 IPR008024 YiaAB two helix N288_02815 ed85613e3c3be7a1174d2f8f1bd8e83d 157 Pfam PF05360 yiaA/B two helix domain 32 85 4.4E-21 T 12-10-2018 IPR008024 YiaAB two helix N288_07325 2884ce55bc4fbe904a7c52ea15d3f4c4 615 Pfam PF00733 Asparagine synthase 241 605 3.8E-95 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 N288_07325 2884ce55bc4fbe904a7c52ea15d3f4c4 615 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 534 4.4E-169 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 N288_07325 2884ce55bc4fbe904a7c52ea15d3f4c4 615 SUPERFAMILY SSF56235 1 226 2.92E-63 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_07325 2884ce55bc4fbe904a7c52ea15d3f4c4 615 Pfam PF13537 Glutamine amidotransferase domain 48 169 4.5E-46 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain N288_07325 2884ce55bc4fbe904a7c52ea15d3f4c4 615 PIRSF PIRSF001589 1 614 1.5E-145 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 N288_07325 2884ce55bc4fbe904a7c52ea15d3f4c4 615 Gene3D G3DSA:3.60.20.10 2 185 1.4E-61 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_07325 2884ce55bc4fbe904a7c52ea15d3f4c4 615 SUPERFAMILY SSF52402 231 577 4.45E-73 T 12-10-2018 N288_18685 189b194548decacca64d881b36777375 586 SUPERFAMILY SSF56601 186 579 7.65E-53 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_18685 189b194548decacca64d881b36777375 586 SUPERFAMILY SSF56519 49 224 8.11E-21 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 N288_18685 189b194548decacca64d881b36777375 586 Pfam PF03717 Penicillin-binding Protein dimerisation domain 57 215 1.4E-6 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 N288_18685 189b194548decacca64d881b36777375 586 Pfam PF00905 Penicillin binding protein transpeptidase domain 261 567 1.4E-41 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 N288_18685 189b194548decacca64d881b36777375 586 Gene3D G3DSA:3.40.710.10 235 585 3.1E-62 T 12-10-2018 N288_18685 189b194548decacca64d881b36777375 586 Gene3D G3DSA:3.90.1310.30 49 231 8.3E-15 T 12-10-2018 N288_23075 61f3a453257822947a4c3436cd90ffdc 520 SMART SM00448 2 116 6.9E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_23075 61f3a453257822947a4c3436cd90ffdc 520 Gene3D G3DSA:1.10.10.60 413 471 1.3E-13 T 12-10-2018 N288_23075 61f3a453257822947a4c3436cd90ffdc 520 Gene3D G3DSA:3.40.50.2300 1 138 2.2E-28 T 12-10-2018 N288_23075 61f3a453257822947a4c3436cd90ffdc 520 Gene3D G3DSA:1.10.10.2730 472 518 9.0E-17 T 12-10-2018 N288_23075 61f3a453257822947a4c3436cd90ffdc 520 Pfam PF00072 Response regulator receiver domain 4 116 8.7E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_23075 61f3a453257822947a4c3436cd90ffdc 520 SUPERFAMILY SSF52172 1 151 2.85E-30 T 12-10-2018 IPR011006 CheY-like superfamily N288_23075 61f3a453257822947a4c3436cd90ffdc 520 Pfam PF12833 Helix-turn-helix domain 440 518 7.0E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_23075 61f3a453257822947a4c3436cd90ffdc 520 SMART SM00342 434 517 1.6E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_23075 61f3a453257822947a4c3436cd90ffdc 520 SUPERFAMILY SSF46689 471 519 2.01E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_05470 7b865081f428de7e4e71c9c88d9cebb6 65 Pfam PF13040 Fur-regulated basic protein B 25 63 9.1E-14 T 12-10-2018 IPR025004 Transcriptional regulatory protein SenN/SenS N288_19400 74f0d206e24ffbfa3950db3a125734a2 257 PIRSF PIRSF000090 1 257 2.3E-79 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 N288_19400 74f0d206e24ffbfa3950db3a125734a2 257 Pfam PF01012 Electron transfer flavoprotein domain 23 206 1.0E-49 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 N288_19400 74f0d206e24ffbfa3950db3a125734a2 257 SUPERFAMILY SSF52402 1 244 5.23E-77 T 12-10-2018 N288_19400 74f0d206e24ffbfa3950db3a125734a2 257 SMART SM00893 21 211 1.8E-61 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 N288_19400 74f0d206e24ffbfa3950db3a125734a2 257 Gene3D G3DSA:3.40.50.620 1 256 1.2E-84 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_10090 c3bc75e4807534b6747daf7aaeefa689 355 Pfam PF00990 Diguanylate cyclase, GGDEF domain 182 330 1.4E-29 T 12-10-2018 IPR000160 GGDEF domain N288_10090 c3bc75e4807534b6747daf7aaeefa689 355 SMART SM00267 170 335 6.6E-37 T 12-10-2018 IPR000160 GGDEF domain N288_10090 c3bc75e4807534b6747daf7aaeefa689 355 SUPERFAMILY SSF55073 186 334 3.77E-32 T 12-10-2018 IPR029787 Nucleotide cyclase N288_10090 c3bc75e4807534b6747daf7aaeefa689 355 Gene3D G3DSA:3.30.70.270 168 333 1.2E-38 T 12-10-2018 N288_10090 c3bc75e4807534b6747daf7aaeefa689 355 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 333 5.7E-30 T 12-10-2018 IPR000160 GGDEF domain N288_00895 bdc6dc39cc14a652905b2ac4b91cf88d 279 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 6 273 3.2E-124 T 12-10-2018 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 N288_00895 bdc6dc39cc14a652905b2ac4b91cf88d 279 Pfam PF00005 ABC transporter 23 169 4.9E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_00895 bdc6dc39cc14a652905b2ac4b91cf88d 279 SUPERFAMILY SSF52540 4 229 1.27E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00895 bdc6dc39cc14a652905b2ac4b91cf88d 279 SMART SM00382 32 217 1.4E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_00895 bdc6dc39cc14a652905b2ac4b91cf88d 279 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_00895 bdc6dc39cc14a652905b2ac4b91cf88d 279 Gene3D G3DSA:3.40.50.300 1 279 7.2E-84 T 12-10-2018 N288_24480 9ee245f290f93ddf99d61785aa6f234e 229 Pfam PF00072 Response regulator receiver domain 4 113 2.9E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_24480 9ee245f290f93ddf99d61785aa6f234e 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 222 6.3E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_24480 9ee245f290f93ddf99d61785aa6f234e 229 SUPERFAMILY SSF46894 133 222 5.67E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_24480 9ee245f290f93ddf99d61785aa6f234e 229 SMART SM00862 148 223 1.4E-14 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_24480 9ee245f290f93ddf99d61785aa6f234e 229 Gene3D G3DSA:1.10.10.10 131 229 2.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_24480 9ee245f290f93ddf99d61785aa6f234e 229 SMART SM00448 2 112 6.3E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_24480 9ee245f290f93ddf99d61785aa6f234e 229 Gene3D G3DSA:3.40.50.2300 2 130 7.6E-29 T 12-10-2018 N288_24480 9ee245f290f93ddf99d61785aa6f234e 229 SUPERFAMILY SSF52172 3 124 2.7E-33 T 12-10-2018 IPR011006 CheY-like superfamily N288_19285 97118273266451e11477d08ce9efc0fa 172 SUPERFAMILY SSF55021 2 77 5.86E-20 T 12-10-2018 N288_19285 97118273266451e11477d08ce9efc0fa 172 Pfam PF10369 Small subunit of acetolactate synthase 85 158 6.0E-28 T 12-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 N288_19285 97118273266451e11477d08ce9efc0fa 172 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 77 4.0E-27 T 12-10-2018 N288_19285 97118273266451e11477d08ce9efc0fa 172 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 2.6E-60 T 12-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 N288_19285 97118273266451e11477d08ce9efc0fa 172 SUPERFAMILY SSF55021 81 160 1.04E-24 T 12-10-2018 N288_19285 97118273266451e11477d08ce9efc0fa 172 Gene3D G3DSA:3.30.70.260 1 79 3.8E-29 T 12-10-2018 N288_19285 97118273266451e11477d08ce9efc0fa 172 Pfam PF01842 ACT domain 8 68 2.1E-14 T 12-10-2018 IPR002912 ACT domain N288_19285 97118273266451e11477d08ce9efc0fa 172 Gene3D G3DSA:3.30.70.1150 84 165 2.4E-28 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal N288_17940 a88dfb3b1c559db5d6bc32e10725db70 123 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 25 123 7.0E-7 T 12-10-2018 N288_17940 a88dfb3b1c559db5d6bc32e10725db70 123 SUPERFAMILY SSF103473 5 97 6.93E-5 T 12-10-2018 IPR036259 MFS transporter superfamily N288_15870 1746e8e9b9358574617b70c2ab5ca72c 66 SUPERFAMILY SSF50249 1 65 5.81E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_15870 1746e8e9b9358574617b70c2ab5ca72c 66 PIRSF PIRSF002599 1 66 2.9E-25 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 N288_15870 1746e8e9b9358574617b70c2ab5ca72c 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.8E-31 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_15870 1746e8e9b9358574617b70c2ab5ca72c 66 SMART SM00357 3 66 5.8E-33 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 N288_15870 1746e8e9b9358574617b70c2ab5ca72c 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 12-10-2018 IPR019844 Cold-shock conserved site N288_15870 1746e8e9b9358574617b70c2ab5ca72c 66 PRINTS PR00050 Cold shock protein signature 24 33 3.3E-20 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_15870 1746e8e9b9358574617b70c2ab5ca72c 66 PRINTS PR00050 Cold shock protein signature 4 19 3.3E-20 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_15870 1746e8e9b9358574617b70c2ab5ca72c 66 PRINTS PR00050 Cold shock protein signature 39 57 3.3E-20 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_15870 1746e8e9b9358574617b70c2ab5ca72c 66 Gene3D G3DSA:2.40.50.140 1 65 4.6E-32 T 12-10-2018 N288_09715 4a09a5ea9ec5a91d6355d905accc2227 151 Pfam PF02050 Flagellar FliJ protein 19 142 9.5E-27 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 N288_09715 4a09a5ea9ec5a91d6355d905accc2227 151 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 142 6.4E-30 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 Gene3D G3DSA:2.60.40.1120 844 913 2.0E-10 T 12-10-2018 N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 Gene3D G3DSA:2.60.40.10 1165 1246 1.5E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 Gene3D G3DSA:2.60.40.10 1251 1333 2.7E-19 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 Pfam PF05547 Immune inhibitor A peptidase M6 675 790 2.2E-12 T 12-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 SUPERFAMILY SSF49464 918 1014 1.26E-15 T 12-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 SUPERFAMILY SSF49464 850 913 1.79E-8 T 12-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 Pfam PF05922 Peptidase inhibitor I9 67 177 1.6E-7 T 12-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 SUPERFAMILY SSF52743 162 515 1.96E-70 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 Gene3D G3DSA:2.60.40.1120 918 998 5.8E-14 T 12-10-2018 N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 PRINTS PR00723 Subtilisin serine protease family (S8) signature 451 467 3.6E-16 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 PRINTS PR00723 Subtilisin serine protease family (S8) signature 272 285 3.6E-16 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 PRINTS PR00723 Subtilisin serine protease family (S8) signature 220 239 3.6E-16 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 Pfam PF13620 Carboxypeptidase regulatory-like domain 918 995 3.8E-12 T 12-10-2018 N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 SUPERFAMILY SSF49899 641 792 3.01E-11 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 Pfam PF00082 Subtilase family 220 506 5.8E-51 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 PIRSF PIRSF015477 1 1442 0.0 T 12-10-2018 IPR012103 Peptidase S8A, bacillopeptidase F N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 276 286 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 452 462 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site N288_08155 c8a1d0bae2994aeae8023c479d1f2006 1442 Gene3D G3DSA:3.40.50.200 192 517 5.6E-77 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 N288_21750 1ac150a7960a665d6d32070667e229e7 241 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 241 42.631 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 N288_21750 1ac150a7960a665d6d32070667e229e7 241 SUPERFAMILY SSF100950 1 239 3.52E-93 T 12-10-2018 IPR037171 NagB/RpiA transferase-like N288_21750 1ac150a7960a665d6d32070667e229e7 241 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 12 226 8.8E-24 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 N288_21750 1ac150a7960a665d6d32070667e229e7 241 Gene3D G3DSA:3.40.50.1360 1 241 1.8E-97 T 12-10-2018 N288_21750 1ac150a7960a665d6d32070667e229e7 241 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 240 4.9E-92 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 N288_21750 1ac150a7960a665d6d32070667e229e7 241 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 120 138 - T 12-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 N288_06700 95a5d25651dfb967c84f0c71b4ee5e24 288 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 241 1.3E-18 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 N288_06700 95a5d25651dfb967c84f0c71b4ee5e24 288 Gene3D G3DSA:3.30.1240.10 83 196 2.0E-44 T 12-10-2018 N288_06700 95a5d25651dfb967c84f0c71b4ee5e24 288 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 267 1.1E-51 T 12-10-2018 N288_06700 95a5d25651dfb967c84f0c71b4ee5e24 288 SUPERFAMILY SSF56784 2 273 1.05E-54 T 12-10-2018 IPR036412 HAD-like superfamily N288_06700 95a5d25651dfb967c84f0c71b4ee5e24 288 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 266 1.1E-42 T 12-10-2018 IPR000150 Cof family GO:0016787 N288_22720 764c8d5a8f6c3aae2044be73cc2b470d 220 Gene3D G3DSA:3.40.50.1000 3 198 2.6E-45 T 12-10-2018 IPR023214 HAD superfamily N288_22720 764c8d5a8f6c3aae2044be73cc2b470d 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 183 3.3E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_22720 764c8d5a8f6c3aae2044be73cc2b470d 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 145 165 9.3E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_22720 764c8d5a8f6c3aae2044be73cc2b470d 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 9.3E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_22720 764c8d5a8f6c3aae2044be73cc2b470d 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 9.3E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_22720 764c8d5a8f6c3aae2044be73cc2b470d 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 127 143 9.3E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_22720 764c8d5a8f6c3aae2044be73cc2b470d 220 Gene3D G3DSA:1.10.150.240 15 83 2.6E-45 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 N288_22720 764c8d5a8f6c3aae2044be73cc2b470d 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 183 3.1E-35 T 12-10-2018 N288_22720 764c8d5a8f6c3aae2044be73cc2b470d 220 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 87 157 4.9E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_22720 764c8d5a8f6c3aae2044be73cc2b470d 220 SUPERFAMILY SSF56784 1 188 1.44E-43 T 12-10-2018 IPR036412 HAD-like superfamily N288_18490 5d2969c3c9fcb605957c1e9016889078 207 Pfam PF01025 GrpE 49 207 1.8E-53 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 N288_18490 5d2969c3c9fcb605957c1e9016889078 207 SUPERFAMILY SSF58014 55 151 8.11E-25 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 N288_18490 5d2969c3c9fcb605957c1e9016889078 207 Hamap MF_01151 Protein GrpE [grpE]. 5 207 21.162 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 N288_18490 5d2969c3c9fcb605957c1e9016889078 207 Gene3D G3DSA:3.90.20.20 36 150 4.8E-26 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 N288_18490 5d2969c3c9fcb605957c1e9016889078 207 Gene3D G3DSA:2.30.22.10 151 207 6.8E-26 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 N288_18490 5d2969c3c9fcb605957c1e9016889078 207 PRINTS PR00773 GrpE protein signature 77 93 6.3E-30 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 N288_18490 5d2969c3c9fcb605957c1e9016889078 207 PRINTS PR00773 GrpE protein signature 105 120 6.3E-30 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 N288_18490 5d2969c3c9fcb605957c1e9016889078 207 PRINTS PR00773 GrpE protein signature 159 174 6.3E-30 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 N288_18490 5d2969c3c9fcb605957c1e9016889078 207 PRINTS PR00773 GrpE protein signature 186 205 6.3E-30 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 N288_18490 5d2969c3c9fcb605957c1e9016889078 207 SUPERFAMILY SSF51064 153 207 4.97E-20 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 N288_18490 5d2969c3c9fcb605957c1e9016889078 207 ProSitePatterns PS01071 grpE protein signature. 162 205 - T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 N288_18070 60970b0e6e09d569dc859588898ce5f6 81 Pfam PF11117 Protein of unknown function (DUF2626) 1 74 6.2E-38 T 12-10-2018 IPR020254 Protein of unknown function DUF2626 N288_18070 60970b0e6e09d569dc859588898ce5f6 81 ProDom PD059814 YQGY TRANSMEMBRANE MEMBRANE PRECURSOR BH2821 SIGNAL 1 79 1.0E-30 T 12-10-2018 IPR020254 Protein of unknown function DUF2626 N288_09615 6917baa6cc104c668470214cc6e80586 281 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 160 175 4.2E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_09615 6917baa6cc104c668470214cc6e80586 281 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 114 134 4.2E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_09615 6917baa6cc104c668470214cc6e80586 281 Pfam PF01926 50S ribosome-binding GTPase 115 200 2.6E-17 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_09615 6917baa6cc104c668470214cc6e80586 281 Gene3D G3DSA:3.40.50.300 3 170 1.2E-50 T 12-10-2018 N288_09615 6917baa6cc104c668470214cc6e80586 281 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 1 269 1.1E-109 T 12-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis N288_09615 6917baa6cc104c668470214cc6e80586 281 Gene3D G3DSA:1.10.1580.10 171 262 6.2E-30 T 12-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily N288_09615 6917baa6cc104c668470214cc6e80586 281 PIRSF PIRSF006230 1 273 4.9E-97 T 12-10-2018 IPR016478 GTPase, MTG1 N288_09615 6917baa6cc104c668470214cc6e80586 281 SUPERFAMILY SSF52540 1 185 5.39E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_14870 a6ba3c2b13fff61c177f25a0d18bf847 303 SUPERFAMILY SSF161098 77 281 6.11E-10 T 12-10-2018 IPR035906 MetI-like superfamily N288_14870 a6ba3c2b13fff61c177f25a0d18bf847 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 289 5.8E-11 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_14870 a6ba3c2b13fff61c177f25a0d18bf847 303 Gene3D G3DSA:1.10.3720.10 71 296 1.3E-10 T 12-10-2018 IPR035906 MetI-like superfamily N288_14020 fc0027036caa16264d804913919d3ee0 131 ProSitePatterns PS00893 Nudix box signature. 33 54 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_14020 fc0027036caa16264d804913919d3ee0 131 SUPERFAMILY SSF55811 2 119 1.14E-21 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_14020 fc0027036caa16264d804913919d3ee0 131 Gene3D G3DSA:3.90.79.10 1 130 3.9E-22 T 12-10-2018 N288_14020 fc0027036caa16264d804913919d3ee0 131 Pfam PF00293 NUDIX domain 8 76 1.3E-13 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_14020 fc0027036caa16264d804913919d3ee0 131 PRINTS PR00502 NUDIX hydrolase family signature 28 42 6.5E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_14020 fc0027036caa16264d804913919d3ee0 131 PRINTS PR00502 NUDIX hydrolase family signature 42 57 6.5E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_16655 90ac26466a859e1617747459899abf90 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 102 113 3.1E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_16655 90ac26466a859e1617747459899abf90 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 164 3.1E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_16655 90ac26466a859e1617747459899abf90 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 176 195 3.1E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_16655 90ac26466a859e1617747459899abf90 273 Gene3D G3DSA:3.40.50.720 4 271 3.9E-85 T 12-10-2018 N288_16655 90ac26466a859e1617747459899abf90 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 33 269 1.7E-67 T 12-10-2018 N288_16655 90ac26466a859e1617747459899abf90 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 166 2.3E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_16655 90ac26466a859e1617747459899abf90 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 195 2.3E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_16655 90ac26466a859e1617747459899abf90 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 214 2.3E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_16655 90ac26466a859e1617747459899abf90 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 28 45 2.3E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_16655 90ac26466a859e1617747459899abf90 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 232 252 2.3E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_16655 90ac26466a859e1617747459899abf90 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 102 113 2.3E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_16655 90ac26466a859e1617747459899abf90 273 SUPERFAMILY SSF51735 25 270 4.17E-88 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_16655 90ac26466a859e1617747459899abf90 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 163 191 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_01980 7421e3a7ac182f4fca7b6d46a910f77e 458 Gene3D G3DSA:3.40.1350.30 132 287 3.1E-128 T 12-10-2018 N288_01980 7421e3a7ac182f4fca7b6d46a910f77e 458 SUPERFAMILY SSF50249 4 64 1.66E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_01980 7421e3a7ac182f4fca7b6d46a910f77e 458 Gene3D G3DSA:3.40.50.150 85 450 3.1E-128 T 12-10-2018 N288_01980 7421e3a7ac182f4fca7b6d46a910f77e 458 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 279 449 2.3E-19 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 N288_01980 7421e3a7ac182f4fca7b6d46a910f77e 458 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 386 417 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site N288_01980 7421e3a7ac182f4fca7b6d46a910f77e 458 Pfam PF01938 TRAM domain 8 62 4.8E-13 T 12-10-2018 IPR002792 TRAM domain N288_01980 7421e3a7ac182f4fca7b6d46a910f77e 458 Gene3D G3DSA:2.40.50.140 2 83 3.0E-22 T 12-10-2018 N288_01980 7421e3a7ac182f4fca7b6d46a910f77e 458 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 20 448 1.6E-187 T 12-10-2018 N288_01980 7421e3a7ac182f4fca7b6d46a910f77e 458 SUPERFAMILY SSF53335 72 453 8.86E-94 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_02110 e79149d613eb666e3dd58d2820fd892d 162 Gene3D G3DSA:1.10.10.10 74 159 7.4E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_02110 e79149d613eb666e3dd58d2820fd892d 162 Gene3D G3DSA:3.30.160.70 4 70 1.6E-14 T 12-10-2018 N288_02110 e79149d613eb666e3dd58d2820fd892d 162 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 76 155 2.5E-30 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 N288_02110 e79149d613eb666e3dd58d2820fd892d 162 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 125 131 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 N288_02110 e79149d613eb666e3dd58d2820fd892d 162 SUPERFAMILY SSF46767 74 155 6.8E-30 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 N288_02110 e79149d613eb666e3dd58d2820fd892d 162 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 8 155 37.631 T 12-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 N288_02110 e79149d613eb666e3dd58d2820fd892d 162 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 75 154 7.6E-34 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 N288_02110 e79149d613eb666e3dd58d2820fd892d 162 SUPERFAMILY SSF53155 4 80 8.24E-20 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 N288_02110 e79149d613eb666e3dd58d2820fd892d 162 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 69 6.7E-6 T 12-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 N288_00780 151506c7ca8d88296819ce651ae70064 144 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 9.3E-54 T 12-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 N288_00780 151506c7ca8d88296819ce651ae70064 144 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 7.5E-63 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00780 151506c7ca8d88296819ce651ae70064 144 Gene3D G3DSA:3.90.1170.10 1 143 1.6E-56 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 N288_00780 151506c7ca8d88296819ce651ae70064 144 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 41.1 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00780 151506c7ca8d88296819ce651ae70064 144 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00780 151506c7ca8d88296819ce651ae70064 144 PRINTS PR00060 Ribosomal protein L16 signature 58 87 3.2E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00780 151506c7ca8d88296819ce651ae70064 144 PRINTS PR00060 Ribosomal protein L16 signature 88 117 3.2E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00780 151506c7ca8d88296819ce651ae70064 144 PRINTS PR00060 Ribosomal protein L16 signature 42 53 3.2E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00780 151506c7ca8d88296819ce651ae70064 144 PRINTS PR00060 Ribosomal protein L16 signature 24 36 3.2E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00780 151506c7ca8d88296819ce651ae70064 144 SUPERFAMILY SSF54686 1 137 6.15E-61 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 N288_00780 151506c7ca8d88296819ce651ae70064 144 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_07345 f445289fd2fe6e3d85915d07ea4c964b 278 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 126 141 - T 12-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 N288_07345 f445289fd2fe6e3d85915d07ea4c964b 278 SUPERFAMILY SSF48576 7 276 1.56E-81 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily N288_07345 f445289fd2fe6e3d85915d07ea4c964b 278 Pfam PF00494 Squalene/phytoene synthase 16 267 5.8E-69 T 12-10-2018 N288_07345 f445289fd2fe6e3d85915d07ea4c964b 278 Gene3D G3DSA:1.10.600.10 1 278 1.6E-94 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily N288_07345 f445289fd2fe6e3d85915d07ea4c964b 278 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 157 182 - T 12-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 N288_24330 305d414e9edbe786e450bd117ae48231 410 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 74 83 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 N288_24330 305d414e9edbe786e450bd117ae48231 410 Gene3D G3DSA:3.40.630.10 5 402 4.3E-185 T 12-10-2018 N288_24330 305d414e9edbe786e450bd117ae48231 410 SUPERFAMILY SSF55031 211 322 1.08E-40 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_24330 305d414e9edbe786e450bd117ae48231 410 SUPERFAMILY SSF53187 3 406 4.28E-82 T 12-10-2018 N288_24330 305d414e9edbe786e450bd117ae48231 410 Hamap MF_00550 Peptidase T [pepT]. 2 406 59.289 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 N288_24330 305d414e9edbe786e450bd117ae48231 410 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 140 179 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 N288_24330 305d414e9edbe786e450bd117ae48231 410 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 410 4.6E-206 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 N288_24330 305d414e9edbe786e450bd117ae48231 410 Gene3D G3DSA:3.30.70.360 211 321 4.3E-185 T 12-10-2018 N288_24330 305d414e9edbe786e450bd117ae48231 410 PIRSF PIRSF037215 1 410 5.9E-196 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 N288_24330 305d414e9edbe786e450bd117ae48231 410 Pfam PF07687 Peptidase dimerisation domain 209 308 8.7E-13 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain N288_24330 305d414e9edbe786e450bd117ae48231 410 Pfam PF01546 Peptidase family M20/M25/M40 141 404 4.8E-13 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_20285 31dce3c9186db88ebc77d197a0bae8da 359 Pfam PF00285 Citrate synthase, C-terminal domain 5 350 2.9E-107 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 N288_20285 31dce3c9186db88ebc77d197a0bae8da 359 PIRSF PIRSF001369 1 359 1.7E-117 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type N288_20285 31dce3c9186db88ebc77d197a0bae8da 359 Gene3D G3DSA:1.10.230.10 213 315 6.2E-115 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain N288_20285 31dce3c9186db88ebc77d197a0bae8da 359 Gene3D G3DSA:1.10.580.10 16 341 6.2E-115 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 N288_20285 31dce3c9186db88ebc77d197a0bae8da 359 PRINTS PR00143 Citrate synthase signature 321 335 2.4E-31 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 N288_20285 31dce3c9186db88ebc77d197a0bae8da 359 PRINTS PR00143 Citrate synthase signature 116 129 2.4E-31 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 N288_20285 31dce3c9186db88ebc77d197a0bae8da 359 PRINTS PR00143 Citrate synthase signature 187 215 2.4E-31 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 N288_20285 31dce3c9186db88ebc77d197a0bae8da 359 PRINTS PR00143 Citrate synthase signature 240 260 2.4E-31 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 N288_20285 31dce3c9186db88ebc77d197a0bae8da 359 PRINTS PR00143 Citrate synthase signature 165 180 2.4E-31 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 N288_20285 31dce3c9186db88ebc77d197a0bae8da 359 PRINTS PR00143 Citrate synthase signature 301 317 2.4E-31 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 N288_20285 31dce3c9186db88ebc77d197a0bae8da 359 SUPERFAMILY SSF48256 2 358 2.88E-112 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 N288_20285 31dce3c9186db88ebc77d197a0bae8da 359 ProSitePatterns PS00480 Citrate synthase signature. 247 259 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 N288_19060 88b0f897f0b5164f6ee04bdf18e57ea5 191 SUPERFAMILY SSF52972 3 183 5.3E-60 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like N288_19060 88b0f897f0b5164f6ee04bdf18e57ea5 191 Gene3D G3DSA:3.90.950.10 1 188 2.4E-71 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like N288_19060 88b0f897f0b5164f6ee04bdf18e57ea5 191 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 32.615 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 N288_19060 88b0f897f0b5164f6ee04bdf18e57ea5 191 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 183 2.4E-58 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 N288_19060 88b0f897f0b5164f6ee04bdf18e57ea5 191 Pfam PF02545 Maf-like protein 4 184 5.3E-59 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 N288_19060 88b0f897f0b5164f6ee04bdf18e57ea5 191 PIRSF PIRSF006305 2 189 3.7E-58 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 N288_22005 f6706d2de3d4c722f7d5b3991de0c162 133 Gene3D G3DSA:1.20.120.340 1 122 2.7E-46 T 12-10-2018 N288_22005 f6706d2de3d4c722f7d5b3991de0c162 133 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 120 2.6E-46 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 N288_22005 f6706d2de3d4c722f7d5b3991de0c162 133 Pfam PF02561 Flagellar protein FliS 7 118 1.8E-44 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 N288_22005 f6706d2de3d4c722f7d5b3991de0c162 133 PIRSF PIRSF039090 1 129 6.3E-40 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 N288_22005 f6706d2de3d4c722f7d5b3991de0c162 133 SUPERFAMILY SSF101116 4 123 6.54E-43 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 N288_10715 91fab6b75e7ad1e64f8465e096ee54f0 254 Gene3D G3DSA:3.40.50.720 2 243 1.1E-26 T 12-10-2018 N288_10715 91fab6b75e7ad1e64f8465e096ee54f0 254 SUPERFAMILY SSF51735 1 251 3.86E-21 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_10715 91fab6b75e7ad1e64f8465e096ee54f0 254 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 175 4.2E-8 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 N288_02170 6df39725d29c368b247be046cc67ce4b 510 SMART SM00448 7 121 8.0E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_02170 6df39725d29c368b247be046cc67ce4b 510 SMART SM00342 421 504 1.0E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_02170 6df39725d29c368b247be046cc67ce4b 510 Pfam PF12833 Helix-turn-helix domain 428 505 3.4E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_02170 6df39725d29c368b247be046cc67ce4b 510 Pfam PF00072 Response regulator receiver domain 9 118 9.8E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_02170 6df39725d29c368b247be046cc67ce4b 510 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 473 488 1.1E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 N288_02170 6df39725d29c368b247be046cc67ce4b 510 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 488 504 1.1E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 N288_02170 6df39725d29c368b247be046cc67ce4b 510 SUPERFAMILY SSF46689 405 449 4.3E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_02170 6df39725d29c368b247be046cc67ce4b 510 SUPERFAMILY SSF46689 457 507 2.06E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_02170 6df39725d29c368b247be046cc67ce4b 510 Gene3D G3DSA:1.10.10.60 455 507 1.2E-18 T 12-10-2018 N288_02170 6df39725d29c368b247be046cc67ce4b 510 SUPERFAMILY SSF52172 8 130 7.12E-35 T 12-10-2018 IPR011006 CheY-like superfamily N288_02170 6df39725d29c368b247be046cc67ce4b 510 Gene3D G3DSA:3.40.50.12740 7 162 4.1E-36 T 12-10-2018 N288_02170 6df39725d29c368b247be046cc67ce4b 510 Gene3D G3DSA:1.10.10.60 405 454 2.7E-15 T 12-10-2018 N288_09920 1edba9ff82e8a99e532085620b57056f 1440 Pfam PF11490 DNA polymerase III polC-type N-terminus II 96 208 2.5E-28 T 12-10-2018 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_09920 1edba9ff82e8a99e532085620b57056f 1440 Gene3D G3DSA:3.20.20.140 560 806 8.9E-61 T 12-10-2018 N288_09920 1edba9ff82e8a99e532085620b57056f 1440 Pfam PF00929 Exonuclease 426 580 1.8E-41 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III N288_09920 1edba9ff82e8a99e532085620b57056f 1440 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 422 639 2.0E-60 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_09920 1edba9ff82e8a99e532085620b57056f 1440 Pfam PF14480 DNA polymerase III polC-type N-terminus I 10 82 8.3E-20 T 12-10-2018 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_09920 1edba9ff82e8a99e532085620b57056f 1440 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 234 1440 0.0 T 12-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_09920 1edba9ff82e8a99e532085620b57056f 1440 Pfam PF14579 Helix-hairpin-helix motif 1354 1432 2.9E-9 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_09920 1edba9ff82e8a99e532085620b57056f 1440 Gene3D G3DSA:1.10.150.700 1099 1187 1.9E-36 T 12-10-2018 N288_09920 1edba9ff82e8a99e532085620b57056f 1440 Gene3D G3DSA:1.10.150.700 1238 1289 1.1E-14 T 12-10-2018 N288_09920 1edba9ff82e8a99e532085620b57056f 1440 Gene3D G3DSA:2.40.50.140 223 324 1.1E-31 T 12-10-2018 N288_09920 1edba9ff82e8a99e532085620b57056f 1440 SMART SM00479 424 590 1.4E-53 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III N288_09920 1edba9ff82e8a99e532085620b57056f 1440 Gene3D G3DSA:1.10.150.870 1291 1426 7.2E-53 T 12-10-2018 N288_09920 1edba9ff82e8a99e532085620b57056f 1440 Gene3D G3DSA:1.10.100.20 998 1045 1.4E-59 T 12-10-2018 N288_09920 1edba9ff82e8a99e532085620b57056f 1440 SUPERFAMILY SSF50249 239 322 3.04E-10 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_09920 1edba9ff82e8a99e532085620b57056f 1440 Pfam PF02811 PHP domain 340 697 1.7E-52 T 12-10-2018 IPR004013 PHP domain GO:0003824 N288_09920 1edba9ff82e8a99e532085620b57056f 1440 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 828 1247 2.4E-97 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_09920 1edba9ff82e8a99e532085620b57056f 1440 Gene3D G3DSA:3.20.20.140 335 416 8.3E-7 T 12-10-2018 N288_09920 1edba9ff82e8a99e532085620b57056f 1440 Gene3D G3DSA:3.30.420.10 417 559 2.2E-44 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 N288_09920 1edba9ff82e8a99e532085620b57056f 1440 SUPERFAMILY SSF53098 424 880 3.03E-110 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily N288_09920 1edba9ff82e8a99e532085620b57056f 1440 SMART SM00481 339 406 1.5E-26 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal N288_09920 1edba9ff82e8a99e532085620b57056f 1440 Gene3D G3DSA:3.30.1900.20 976 1098 1.4E-59 T 12-10-2018 N288_09920 1edba9ff82e8a99e532085620b57056f 1440 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1440 450.592 T 12-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_18205 6f5f1e2009362b53c8f1bffca036e520 316 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 30 312 2.6E-81 T 12-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 N288_18205 6f5f1e2009362b53c8f1bffca036e520 316 Gene3D G3DSA:1.10.3720.10 86 315 4.4E-38 T 12-10-2018 IPR035906 MetI-like superfamily N288_18205 6f5f1e2009362b53c8f1bffca036e520 316 SUPERFAMILY SSF161098 34 309 2.8E-36 T 12-10-2018 IPR035906 MetI-like superfamily N288_18205 6f5f1e2009362b53c8f1bffca036e520 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 313 3.3E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_05920 1a31935795acfcfc92eff2133ea84bd3 244 PIRSF PIRSF030013 1 240 1.0E-129 T 12-10-2018 IPR009381 Trehalose catabolism protein, ThuA, prokaryote N288_05920 1a31935795acfcfc92eff2133ea84bd3 244 Pfam PF06283 Trehalose utilisation 3 218 8.4E-36 T 12-10-2018 IPR029010 ThuA-like domain N288_05920 1a31935795acfcfc92eff2133ea84bd3 244 Gene3D G3DSA:3.40.50.880 1 244 1.2E-115 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_05920 1a31935795acfcfc92eff2133ea84bd3 244 SUPERFAMILY SSF52317 3 236 3.43E-69 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_23175 76f7bf48b187694a4136d88fcd086160 420 Gene3D G3DSA:3.60.15.10 167 418 6.3E-17 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_23175 76f7bf48b187694a4136d88fcd086160 420 SUPERFAMILY SSF56281 189 412 1.0E-8 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_14510 087891ed07bfdb107ca6a072176e0ad3 256 SMART SM00382 31 219 2.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_14510 087891ed07bfdb107ca6a072176e0ad3 256 Pfam PF00005 ABC transporter 22 170 5.2E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_14510 087891ed07bfdb107ca6a072176e0ad3 256 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_14510 087891ed07bfdb107ca6a072176e0ad3 256 Gene3D G3DSA:3.40.50.300 1 244 9.4E-68 T 12-10-2018 N288_14510 087891ed07bfdb107ca6a072176e0ad3 256 SUPERFAMILY SSF52540 3 224 7.73E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_01415 de8ae04bdbfd782b786e367608afe6e1 415 Pfam PF00579 tRNA synthetases class I (W and Y) 48 334 1.8E-76 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_01415 de8ae04bdbfd782b786e367608afe6e1 415 Gene3D G3DSA:3.40.50.620 16 233 3.8E-68 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_01415 de8ae04bdbfd782b786e367608afe6e1 415 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 17 413 3.3E-129 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 N288_01415 de8ae04bdbfd782b786e367608afe6e1 415 Gene3D G3DSA:1.10.240.10 234 342 1.3E-37 T 12-10-2018 N288_01415 de8ae04bdbfd782b786e367608afe6e1 415 SMART SM00363 354 413 0.0014 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_01415 de8ae04bdbfd782b786e367608afe6e1 415 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 14 414 44.923 T 12-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 N288_01415 de8ae04bdbfd782b786e367608afe6e1 415 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 68 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_01415 de8ae04bdbfd782b786e367608afe6e1 415 SUPERFAMILY SSF52374 22 333 4.83E-85 T 12-10-2018 N288_01415 de8ae04bdbfd782b786e367608afe6e1 415 Gene3D G3DSA:3.10.290.10 343 414 1.2E-18 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 N288_01415 de8ae04bdbfd782b786e367608afe6e1 415 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 227 239 6.5E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 N288_01415 de8ae04bdbfd782b786e367608afe6e1 415 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 62 84 6.5E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 N288_01415 de8ae04bdbfd782b786e367608afe6e1 415 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 194 216 6.5E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 N288_01415 de8ae04bdbfd782b786e367608afe6e1 415 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 177 192 6.5E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 N288_01415 de8ae04bdbfd782b786e367608afe6e1 415 Pfam PF01479 S4 domain 361 396 3.4E-6 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_01415 de8ae04bdbfd782b786e367608afe6e1 415 SUPERFAMILY SSF55174 337 413 1.01E-19 T 12-10-2018 N288_17165 de4f6323484520e229050b144abf9f08 343 Gene3D G3DSA:3.40.50.40 228 343 1.6E-27 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 N288_17165 de4f6323484520e229050b144abf9f08 343 PRINTS PR00139 Asparaginase/glutaminase family signature 24 35 4.6E-16 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 N288_17165 de4f6323484520e229050b144abf9f08 343 PRINTS PR00139 Asparaginase/glutaminase family signature 273 291 4.6E-16 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 N288_17165 de4f6323484520e229050b144abf9f08 343 PRINTS PR00139 Asparaginase/glutaminase family signature 100 118 4.6E-16 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 N288_17165 de4f6323484520e229050b144abf9f08 343 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 101 111 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 N288_17165 de4f6323484520e229050b144abf9f08 343 PIRSF PIRSF001220 18 343 8.0E-93 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 N288_17165 de4f6323484520e229050b144abf9f08 343 PIRSF PIRSF500176 20 343 5.8E-92 T 12-10-2018 N288_17165 de4f6323484520e229050b144abf9f08 343 SMART SM00870 23 338 2.9E-136 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 N288_17165 de4f6323484520e229050b144abf9f08 343 Gene3D G3DSA:3.40.50.1170 18 227 1.2E-65 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 N288_17165 de4f6323484520e229050b144abf9f08 343 Pfam PF00710 Asparaginase, N-terminal 23 210 2.3E-58 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 N288_17165 de4f6323484520e229050b144abf9f08 343 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 26 34 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 N288_17165 de4f6323484520e229050b144abf9f08 343 SUPERFAMILY SSF53774 18 342 6.54E-99 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 N288_17530 e0e920c51ec654e76c071067e8b12d27 229 SUPERFAMILY SSF100950 3 223 5.58E-89 T 12-10-2018 IPR037171 NagB/RpiA transferase-like N288_17530 e0e920c51ec654e76c071067e8b12d27 229 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 4 215 4.6E-82 T 12-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 N288_17530 e0e920c51ec654e76c071067e8b12d27 229 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 17 32 - T 12-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 N288_17530 e0e920c51ec654e76c071067e8b12d27 229 Pfam PF01144 Coenzyme A transferase 6 214 1.3E-77 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 N288_17530 e0e920c51ec654e76c071067e8b12d27 229 Gene3D G3DSA:3.40.1080.10 1 225 2.0E-97 T 12-10-2018 N288_17530 e0e920c51ec654e76c071067e8b12d27 229 SMART SM00882 5 216 3.0E-93 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 N288_11245 f2a942b3f710cfa42b2964c2b15956e4 251 SUPERFAMILY SSF57716 91 118 3.71E-6 T 12-10-2018 N288_11245 f2a942b3f710cfa42b2964c2b15956e4 251 TIGRFAM TIGR02890 bacill_yteA: regulatory protein, yteA family 6 164 6.4E-61 T 12-10-2018 IPR014240 Regulatory protein, YteA family N288_11245 f2a942b3f710cfa42b2964c2b15956e4 251 Gene3D G3DSA:1.20.120.910 1 128 1.3E-29 T 12-10-2018 N288_11245 f2a942b3f710cfa42b2964c2b15956e4 251 SUPERFAMILY SSF109635 2 90 7.59E-12 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily N288_11245 f2a942b3f710cfa42b2964c2b15956e4 251 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 89 117 7.0E-10 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 N288_20735 dce9330ed6e175e5f79cacb04ed37617 126 SUPERFAMILY SSF141251 4 125 3.92E-53 T 12-10-2018 IPR038080 Kinase associated protein B superfamily N288_20735 dce9330ed6e175e5f79cacb04ed37617 126 Pfam PF08810 Kinase associated protein B 14 125 4.8E-49 T 12-10-2018 IPR014916 Kinase associated protein B N288_20735 dce9330ed6e175e5f79cacb04ed37617 126 SMART SM01298 14 126 2.9E-68 T 12-10-2018 IPR014916 Kinase associated protein B N288_20735 dce9330ed6e175e5f79cacb04ed37617 126 Gene3D G3DSA:2.30.30.430 1 125 3.7E-52 T 12-10-2018 IPR038080 Kinase associated protein B superfamily N288_09630 254bebb946eef0b1c7d6f49107e08c0e 99 Pfam PF01312 FlhB HrpN YscU SpaS Family 12 83 1.2E-18 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 N288_09630 254bebb946eef0b1c7d6f49107e08c0e 99 SUPERFAMILY SSF160544 10 87 4.58E-23 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal N288_09630 254bebb946eef0b1c7d6f49107e08c0e 99 Gene3D G3DSA:3.40.1690.10 9 91 4.3E-25 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal N288_02090 60727044d7d090bc5026f631f1a520bd 132 SMART SM00347 12 111 2.5E-23 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_02090 60727044d7d090bc5026f631f1a520bd 132 SUPERFAMILY SSF46785 2 126 4.4E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_02090 60727044d7d090bc5026f631f1a520bd 132 Pfam PF01047 MarR family 20 75 1.2E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_02090 60727044d7d090bc5026f631f1a520bd 132 Gene3D G3DSA:1.10.10.10 1 130 8.0E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_19670 72334cf0a37d7418aba19c3ffd85e020 111 Pfam PF14034 Sporulation protein YtrH 9 107 8.7E-41 T 12-10-2018 IPR025689 Sporulation protein YtrH N288_14555 7da0e302464fdc36259738c41386d7be 328 Pfam PF10778 Halocarboxylic acid dehydrogenase DehI 80 226 1.4E-47 T 12-10-2018 IPR019714 2-haloacid dehalogenase, DehI GO:0019120 N288_09310 bd0ba207478ee7dae9062fe7bba90922 301 SUPERFAMILY SSF55120 73 300 1.77E-80 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_09310 bd0ba207478ee7dae9062fe7bba90922 301 Gene3D G3DSA:3.10.290.10 3 70 5.9E-17 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 N288_09310 bd0ba207478ee7dae9062fe7bba90922 301 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 11 299 2.4E-102 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_09310 bd0ba207478ee7dae9062fe7bba90922 301 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_09310 bd0ba207478ee7dae9062fe7bba90922 301 Pfam PF01479 S4 domain 15 61 4.9E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_09310 bd0ba207478ee7dae9062fe7bba90922 301 SUPERFAMILY SSF55174 14 101 1.38E-16 T 12-10-2018 N288_09310 bd0ba207478ee7dae9062fe7bba90922 301 SMART SM00363 15 79 3.9E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_09310 bd0ba207478ee7dae9062fe7bba90922 301 Gene3D G3DSA:3.30.2350.10 81 301 8.1E-75 T 12-10-2018 N288_09310 bd0ba207478ee7dae9062fe7bba90922 301 Pfam PF00849 RNA pseudouridylate synthase 88 241 8.0E-35 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_21170 1edd036d40c7d8adc8e53a980eb1452a 422 Pfam PF07690 Major Facilitator Superfamily 22 366 5.0E-32 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_21170 1edd036d40c7d8adc8e53a980eb1452a 422 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 88 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_21170 1edd036d40c7d8adc8e53a980eb1452a 422 Gene3D G3DSA:1.20.1250.20 226 413 7.0E-22 T 12-10-2018 N288_21170 1edd036d40c7d8adc8e53a980eb1452a 422 Gene3D G3DSA:1.20.1250.20 20 208 7.2E-22 T 12-10-2018 N288_21170 1edd036d40c7d8adc8e53a980eb1452a 422 SUPERFAMILY SSF103473 16 409 3.4E-54 T 12-10-2018 IPR036259 MFS transporter superfamily N288_12595 d7fa0e4f423d119cc8ec2f63ddf3f1f8 371 Gene3D G3DSA:3.60.21.10 29 371 1.7E-107 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_12595 d7fa0e4f423d119cc8ec2f63ddf3f1f8 371 ProSitePatterns PS00785 5'-nucleotidase signature 1. 37 49 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_12595 d7fa0e4f423d119cc8ec2f63ddf3f1f8 371 SUPERFAMILY SSF56300 32 369 4.49E-78 T 12-10-2018 N288_12595 d7fa0e4f423d119cc8ec2f63ddf3f1f8 371 PRINTS PR01607 Apyrase family signature 300 320 2.6E-18 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_12595 d7fa0e4f423d119cc8ec2f63ddf3f1f8 371 PRINTS PR01607 Apyrase family signature 35 53 2.6E-18 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_12595 d7fa0e4f423d119cc8ec2f63ddf3f1f8 371 PRINTS PR01607 Apyrase family signature 259 282 2.6E-18 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_12595 d7fa0e4f423d119cc8ec2f63ddf3f1f8 371 PRINTS PR01607 Apyrase family signature 230 247 2.6E-18 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_12595 d7fa0e4f423d119cc8ec2f63ddf3f1f8 371 Pfam PF00149 Calcineurin-like phosphoesterase 37 276 1.8E-12 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 N288_09410 c223515acf01dbcec1c30f2e49226c5a 179 Hamap MF_00163 Peptide deformylase [def]. 20 176 29.461 T 12-10-2018 IPR023635 Peptide deformylase N288_09410 c223515acf01dbcec1c30f2e49226c5a 179 Gene3D G3DSA:3.90.45.10 19 174 2.0E-61 T 12-10-2018 IPR036821 Peptide deformylase superfamily N288_09410 c223515acf01dbcec1c30f2e49226c5a 179 Pfam PF01327 Polypeptide deformylase 21 166 2.0E-50 T 12-10-2018 IPR023635 Peptide deformylase N288_09410 c223515acf01dbcec1c30f2e49226c5a 179 PIRSF PIRSF004749 5 178 2.3E-51 T 12-10-2018 IPR023635 Peptide deformylase N288_09410 c223515acf01dbcec1c30f2e49226c5a 179 PRINTS PR01576 Peptide deformylase signature 137 166 1.1E-35 T 12-10-2018 IPR023635 Peptide deformylase N288_09410 c223515acf01dbcec1c30f2e49226c5a 179 PRINTS PR01576 Peptide deformylase signature 106 117 1.1E-35 T 12-10-2018 IPR023635 Peptide deformylase N288_09410 c223515acf01dbcec1c30f2e49226c5a 179 PRINTS PR01576 Peptide deformylase signature 51 80 1.1E-35 T 12-10-2018 IPR023635 Peptide deformylase N288_09410 c223515acf01dbcec1c30f2e49226c5a 179 PRINTS PR01576 Peptide deformylase signature 118 136 1.1E-35 T 12-10-2018 IPR023635 Peptide deformylase N288_09410 c223515acf01dbcec1c30f2e49226c5a 179 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 22 173 5.3E-56 T 12-10-2018 IPR023635 Peptide deformylase N288_09410 c223515acf01dbcec1c30f2e49226c5a 179 SUPERFAMILY SSF56420 19 167 4.32E-56 T 12-10-2018 IPR036821 Peptide deformylase superfamily N288_22345 2b8c88b8744c098c782ed1484d0cad5c 183 Pfam PF06725 3D domain 123 181 2.4E-18 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 N288_22345 2b8c88b8744c098c782ed1484d0cad5c 183 Gene3D G3DSA:3.10.350.10 24 77 7.6E-19 T 12-10-2018 IPR036779 LysM domain superfamily N288_22345 2b8c88b8744c098c782ed1484d0cad5c 183 SUPERFAMILY SSF54106 26 69 2.22E-12 T 12-10-2018 N288_22345 2b8c88b8744c098c782ed1484d0cad5c 183 SMART SM00257 28 71 8.2E-16 T 12-10-2018 IPR018392 LysM domain N288_22345 2b8c88b8744c098c782ed1484d0cad5c 183 Pfam PF01476 LysM domain 29 69 4.3E-15 T 12-10-2018 IPR018392 LysM domain N288_22345 2b8c88b8744c098c782ed1484d0cad5c 183 SUPERFAMILY SSF50685 122 170 7.67E-7 T 12-10-2018 IPR036908 RlpA-like domain superfamily N288_25915 dcf17892e6fe558b372c3000474eb619 657 PIRSF PIRSF026583 1 657 2.1E-270 T 12-10-2018 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA N288_25915 dcf17892e6fe558b372c3000474eb619 657 SUPERFAMILY SSF64182 338 640 6.93E-66 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily N288_25915 dcf17892e6fe558b372c3000474eb619 657 Pfam PF02272 DHHA1 domain 520 647 3.2E-12 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 N288_25915 dcf17892e6fe558b372c3000474eb619 657 Gene3D G3DSA:3.10.310.30 559 654 4.0E-8 T 12-10-2018 N288_25915 dcf17892e6fe558b372c3000474eb619 657 Gene3D G3DSA:3.90.1640.10 322 540 3.9E-52 T 12-10-2018 N288_25915 dcf17892e6fe558b372c3000474eb619 657 Pfam PF01368 DHH family 339 496 7.3E-22 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 N288_25915 dcf17892e6fe558b372c3000474eb619 657 SMART SM00267 132 299 5.8E-7 T 12-10-2018 IPR000160 GGDEF domain N288_25915 dcf17892e6fe558b372c3000474eb619 657 Gene3D G3DSA:3.30.450.20 54 161 7.5E-35 T 12-10-2018 N288_11875 44d7b99a87f6b343aba46a5b07a4265a 251 SUPERFAMILY SSF161098 54 241 1.18E-32 T 12-10-2018 IPR035906 MetI-like superfamily N288_11875 44d7b99a87f6b343aba46a5b07a4265a 251 Gene3D G3DSA:1.10.3720.10 51 250 2.1E-30 T 12-10-2018 IPR035906 MetI-like superfamily N288_11875 44d7b99a87f6b343aba46a5b07a4265a 251 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 245 2.1E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_11875 44d7b99a87f6b343aba46a5b07a4265a 251 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 6 250 1.5E-77 T 12-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 N288_16090 5fcf36cba0b565180eaccb748628948a 300 Gene3D G3DSA:1.10.260.150 46 300 2.5E-69 T 12-10-2018 N288_16090 5fcf36cba0b565180eaccb748628948a 300 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 66 210 5.0E-28 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain N288_16090 5fcf36cba0b565180eaccb748628948a 300 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 66 210 1.0E-39 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain N288_11615 feb907118ce977ca87b6e9ffd9fbcb09 458 Gene3D G3DSA:1.10.10.10 2 88 2.9E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_11615 feb907118ce977ca87b6e9ffd9fbcb09 458 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 1.1E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_11615 feb907118ce977ca87b6e9ffd9fbcb09 458 SMART SM00345 17 76 1.3E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_11615 feb907118ce977ca87b6e9ffd9fbcb09 458 SUPERFAMILY SSF53383 98 456 6.64E-85 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_11615 feb907118ce977ca87b6e9ffd9fbcb09 458 Gene3D G3DSA:3.40.640.10 94 450 2.8E-117 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_11615 feb907118ce977ca87b6e9ffd9fbcb09 458 Pfam PF00155 Aminotransferase class I and II 118 423 8.1E-22 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 N288_11615 feb907118ce977ca87b6e9ffd9fbcb09 458 SUPERFAMILY SSF46785 5 80 2.0E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_17405 5a8bcefdf121fcf4a73dfc6194fbc46f 494 PIRSF PIRSF005690 7 494 2.4E-134 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 N288_17405 5a8bcefdf121fcf4a73dfc6194fbc46f 494 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 29 480 9.8E-152 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 N288_20215 f71472b55b6c610d4bc97fcb8580f7b9 634 SUPERFAMILY SSF52402 228 605 1.05E-90 T 12-10-2018 N288_20215 f71472b55b6c610d4bc97fcb8580f7b9 634 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 547 8.0E-174 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 N288_20215 f71472b55b6c610d4bc97fcb8580f7b9 634 PIRSF PIRSF001589 1 627 8.1E-202 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 N288_20215 f71472b55b6c610d4bc97fcb8580f7b9 634 SUPERFAMILY SSF56235 1 224 2.4E-61 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_20215 f71472b55b6c610d4bc97fcb8580f7b9 634 Pfam PF00733 Asparagine synthase 240 609 2.1E-116 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 N288_20215 f71472b55b6c610d4bc97fcb8580f7b9 634 Gene3D G3DSA:3.60.20.10 4 189 6.2E-63 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_20215 f71472b55b6c610d4bc97fcb8580f7b9 634 Pfam PF13537 Glutamine amidotransferase domain 51 168 1.8E-44 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain N288_08010 59aded19808c57f7635e6d71c6844798 191 Gene3D G3DSA:3.40.50.1000 3 159 2.1E-29 T 12-10-2018 IPR023214 HAD superfamily N288_08010 59aded19808c57f7635e6d71c6844798 191 SUPERFAMILY SSF56784 3 185 1.11E-29 T 12-10-2018 IPR036412 HAD-like superfamily N288_08010 59aded19808c57f7635e6d71c6844798 191 Pfam PF13419 Haloacid dehalogenase-like hydrolase 3 162 1.2E-18 T 12-10-2018 N288_08010 59aded19808c57f7635e6d71c6844798 191 Gene3D G3DSA:1.10.150.240 13 73 2.1E-29 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 N288_08010 59aded19808c57f7635e6d71c6844798 191 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 3 158 1.4E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_10670 c9920494e8359b0c7a2ec13e8f0a8149 561 SMART SM00283 285 560 3.2E-75 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_10670 c9920494e8359b0c7a2ec13e8f0a8149 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 13 1.0E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 N288_10670 c9920494e8359b0c7a2ec13e8f0a8149 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 410 1.0E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 N288_10670 c9920494e8359b0c7a2ec13e8f0a8149 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 1.0E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 N288_10670 c9920494e8359b0c7a2ec13e8f0a8149 561 SMART SM00304 202 256 1.5E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_10670 c9920494e8359b0c7a2ec13e8f0a8149 561 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 507 7.3E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_10670 c9920494e8359b0c7a2ec13e8f0a8149 561 Pfam PF00672 HAMP domain 202 252 1.3E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_10670 c9920494e8359b0c7a2ec13e8f0a8149 561 Gene3D G3DSA:1.10.287.950 258 560 7.7E-61 T 12-10-2018 N288_10670 c9920494e8359b0c7a2ec13e8f0a8149 561 Gene3D G3DSA:1.20.1480.50 163 257 3.2E-8 T 12-10-2018 N288_10670 c9920494e8359b0c7a2ec13e8f0a8149 561 SUPERFAMILY SSF58104 224 560 3.92E-68 T 12-10-2018 N288_25705 b40e114ac8147afcef5115fb8c2b876f 344 SUPERFAMILY SSF81345 11 338 2.09E-71 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_25705 b40e114ac8147afcef5115fb8c2b876f 344 Pfam PF01032 FecCD transport family 29 338 8.5E-83 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 N288_25705 b40e114ac8147afcef5115fb8c2b876f 344 Gene3D G3DSA:1.10.3470.10 16 343 3.6E-85 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_09970 d5f7d4dd17c929a72bb7b6c83a4dd91f 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 89 1.7E-42 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09970 d5f7d4dd17c929a72bb7b6c83a4dd91f 89 Gene3D G3DSA:1.10.287.10 2 89 1.9E-37 T 12-10-2018 N288_09970 d5f7d4dd17c929a72bb7b6c83a4dd91f 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 12 88 3.0E-35 T 12-10-2018 N288_09970 d5f7d4dd17c929a72bb7b6c83a4dd91f 89 SUPERFAMILY SSF47060 3 89 7.65E-37 T 12-10-2018 IPR009068 S15/NS1, RNA-binding N288_09970 d5f7d4dd17c929a72bb7b6c83a4dd91f 89 SMART SM01387 8 88 4.6E-52 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_09970 d5f7d4dd17c929a72bb7b6c83a4dd91f 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_09970 d5f7d4dd17c929a72bb7b6c83a4dd91f 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 23.142 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09970 d5f7d4dd17c929a72bb7b6c83a4dd91f 89 Pfam PF00312 Ribosomal protein S15 8 88 2.3E-38 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_04800 59791985fee5b21afae39b653b4e0b13 66 SMART SM00357 3 66 4.0E-33 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 N288_04800 59791985fee5b21afae39b653b4e0b13 66 PIRSF PIRSF002599 1 66 1.9E-25 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 N288_04800 59791985fee5b21afae39b653b4e0b13 66 PRINTS PR00050 Cold shock protein signature 4 19 2.5E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_04800 59791985fee5b21afae39b653b4e0b13 66 PRINTS PR00050 Cold shock protein signature 24 33 2.5E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_04800 59791985fee5b21afae39b653b4e0b13 66 PRINTS PR00050 Cold shock protein signature 39 57 2.5E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_04800 59791985fee5b21afae39b653b4e0b13 66 SUPERFAMILY SSF50249 1 64 2.79E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_04800 59791985fee5b21afae39b653b4e0b13 66 Gene3D G3DSA:2.40.50.140 1 66 3.9E-31 T 12-10-2018 N288_04800 59791985fee5b21afae39b653b4e0b13 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 5.3E-32 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_04800 59791985fee5b21afae39b653b4e0b13 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 12-10-2018 IPR019844 Cold-shock conserved site N288_24955 36764b89048755794cc4a80223d56885 123 SMART SM00345 17 76 1.2E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_24955 36764b89048755794cc4a80223d56885 123 SUPERFAMILY SSF46785 6 84 9.18E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_24955 36764b89048755794cc4a80223d56885 123 Gene3D G3DSA:1.10.10.10 10 123 2.1E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_24955 36764b89048755794cc4a80223d56885 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 3.0E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_10205 1edd18c420277fd3c065e9f764429a72 640 SUPERFAMILY SSF118116 450 638 7.72E-54 T 12-10-2018 IPR037198 MutL, C-terminal domain superfamily N288_10205 1edd18c420277fd3c065e9f764429a72 640 SUPERFAMILY SSF54211 188 325 2.12E-36 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_10205 1edd18c420277fd3c065e9f764429a72 640 SUPERFAMILY SSF55874 4 212 2.62E-51 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_10205 1edd18c420277fd3c065e9f764429a72 640 Gene3D G3DSA:3.30.230.10 212 324 1.0E-31 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup N288_10205 1edd18c420277fd3c065e9f764429a72 640 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 636 28.172 T 12-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 N288_10205 1edd18c420277fd3c065e9f764429a72 640 SMART SM01340 207 325 3.4E-51 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 N288_10205 1edd18c420277fd3c065e9f764429a72 640 Gene3D G3DSA:3.30.1370.100 496 589 1.4E-64 T 12-10-2018 N288_10205 1edd18c420277fd3c065e9f764429a72 640 Pfam PF08676 MutL C terminal dimerisation domain 454 596 4.8E-47 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 N288_10205 1edd18c420277fd3c065e9f764429a72 640 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 208 324 2.6E-36 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 N288_10205 1edd18c420277fd3c065e9f764429a72 640 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 305 1.1E-101 T 12-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 N288_10205 1edd18c420277fd3c065e9f764429a72 640 Gene3D G3DSA:3.30.565.10 3 211 3.8E-62 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_10205 1edd18c420277fd3c065e9f764429a72 640 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 12-10-2018 IPR014762 DNA mismatch repair, conserved site N288_10205 1edd18c420277fd3c065e9f764429a72 640 SMART SM00853 454 596 3.6E-54 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 N288_10205 1edd18c420277fd3c065e9f764429a72 640 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 97 1.8E-10 T 12-10-2018 N288_10205 1edd18c420277fd3c065e9f764429a72 640 Gene3D G3DSA:2.30.42.20 455 638 1.4E-64 T 12-10-2018 N288_11905 4753c1d451c7a1bad80b1fafbb85a56c 364 Pfam PF01063 Amino-transferase class IV 70 312 2.2E-33 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 N288_11905 4753c1d451c7a1bad80b1fafbb85a56c 364 Gene3D G3DSA:3.20.10.10 171 339 1.4E-137 T 12-10-2018 N288_11905 4753c1d451c7a1bad80b1fafbb85a56c 364 SUPERFAMILY SSF56752 5 353 4.71E-118 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 N288_11905 4753c1d451c7a1bad80b1fafbb85a56c 364 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 44 356 4.1E-124 T 12-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 N288_11905 4753c1d451c7a1bad80b1fafbb85a56c 364 Gene3D G3DSA:3.30.470.10 25 352 1.4E-137 T 12-10-2018 N288_11905 4753c1d451c7a1bad80b1fafbb85a56c 364 PIRSF PIRSF006468 1 358 4.3E-137 T 12-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 N288_11905 4753c1d451c7a1bad80b1fafbb85a56c 364 ProSitePatterns PS00770 Aminotransferases class-IV signature. 233 262 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 N288_09260 8ddaaf19f07a8ea79e26adad3de488b7 89 SUPERFAMILY SSF50346 1 75 8.63E-14 T 12-10-2018 IPR011033 PRC-barrel-like superfamily N288_09260 8ddaaf19f07a8ea79e26adad3de488b7 89 Pfam PF05239 PRC-barrel domain 2 75 7.7E-13 T 12-10-2018 IPR027275 PRC-barrel domain N288_09260 8ddaaf19f07a8ea79e26adad3de488b7 89 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 3 74 3.0E-26 T 12-10-2018 IPR014238 Sporulation protein YlmC/YmxH N288_09260 8ddaaf19f07a8ea79e26adad3de488b7 89 Gene3D G3DSA:2.30.30.240 1 77 1.2E-11 T 12-10-2018 N288_19185 926497dc801da098294f3a71391fea36 326 PIRSF PIRSF001415 1 325 4.3E-156 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 N288_19185 926497dc801da098294f3a71391fea36 326 SUPERFAMILY SSF51569 4 324 5.71E-144 T 12-10-2018 N288_19185 926497dc801da098294f3a71391fea36 326 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 296 315 7.0E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 N288_19185 926497dc801da098294f3a71391fea36 326 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 7.0E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 N288_19185 926497dc801da098294f3a71391fea36 326 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 7.0E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 N288_19185 926497dc801da098294f3a71391fea36 326 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 241 257 7.0E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 N288_19185 926497dc801da098294f3a71391fea36 326 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 266 281 7.0E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 N288_19185 926497dc801da098294f3a71391fea36 326 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 7.0E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 N288_19185 926497dc801da098294f3a71391fea36 326 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 321 9.0E-152 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 N288_19185 926497dc801da098294f3a71391fea36 326 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 241 253 - T 12-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 N288_19185 926497dc801da098294f3a71391fea36 326 SMART SM01004 3 322 1.7E-238 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 N288_19185 926497dc801da098294f3a71391fea36 326 Gene3D G3DSA:3.20.20.70 1 323 7.4E-152 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_12195 cb42d5585788e8f23b110af055d4246b 281 Gene3D G3DSA:3.10.350.10 72 124 1.4E-19 T 12-10-2018 IPR036779 LysM domain superfamily N288_12195 cb42d5585788e8f23b110af055d4246b 281 Gene3D G3DSA:3.10.350.10 26 71 4.5E-14 T 12-10-2018 IPR036779 LysM domain superfamily N288_12195 cb42d5585788e8f23b110af055d4246b 281 Pfam PF01476 LysM domain 29 68 2.2E-11 T 12-10-2018 IPR018392 LysM domain N288_12195 cb42d5585788e8f23b110af055d4246b 281 Pfam PF01476 LysM domain 74 115 8.3E-14 T 12-10-2018 IPR018392 LysM domain N288_12195 cb42d5585788e8f23b110af055d4246b 281 SUPERFAMILY SSF54106 72 116 1.83E-12 T 12-10-2018 N288_12195 cb42d5585788e8f23b110af055d4246b 281 Pfam PF06725 3D domain 221 280 7.5E-19 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 N288_12195 cb42d5585788e8f23b110af055d4246b 281 SMART SM00257 73 116 1.8E-14 T 12-10-2018 IPR018392 LysM domain N288_12195 cb42d5585788e8f23b110af055d4246b 281 SMART SM00257 26 69 2.0E-11 T 12-10-2018 IPR018392 LysM domain N288_12195 cb42d5585788e8f23b110af055d4246b 281 SUPERFAMILY SSF54106 28 68 7.72E-9 T 12-10-2018 N288_12195 cb42d5585788e8f23b110af055d4246b 281 SUPERFAMILY SSF50685 222 267 8.37E-7 T 12-10-2018 IPR036908 RlpA-like domain superfamily N288_09640 7befb8fee60475db0d615326b7bd643d 300 SUPERFAMILY SSF52210 123 287 2.75E-56 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 N288_09640 7befb8fee60475db0d615326b7bd643d 300 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 12-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site N288_09640 7befb8fee60475db0d615326b7bd643d 300 SUPERFAMILY SSF51735 2 122 7.27E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_09640 7befb8fee60475db0d615326b7bd643d 300 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 7.1E-40 T 12-10-2018 N288_09640 7befb8fee60475db0d615326b7bd643d 300 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 7.1E-40 T 12-10-2018 N288_09640 7befb8fee60475db0d615326b7bd643d 300 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 7.1E-40 T 12-10-2018 N288_09640 7befb8fee60475db0d615326b7bd643d 300 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 7.1E-40 T 12-10-2018 N288_09640 7befb8fee60475db0d615326b7bd643d 300 SMART SM00881 4 100 1.8E-33 T 12-10-2018 IPR003781 CoA-binding GO:0048037 N288_09640 7befb8fee60475db0d615326b7bd643d 300 PIRSF PIRSF001553 1 291 4.9E-134 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 N288_09640 7befb8fee60475db0d615326b7bd643d 300 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.619 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 N288_09640 7befb8fee60475db0d615326b7bd643d 300 Pfam PF02629 CoA binding domain 6 99 2.7E-30 T 12-10-2018 IPR003781 CoA-binding GO:0048037 N288_09640 7befb8fee60475db0d615326b7bd643d 300 Gene3D G3DSA:3.40.50.720 1 123 7.2E-51 T 12-10-2018 N288_09640 7befb8fee60475db0d615326b7bd643d 300 Gene3D G3DSA:3.40.50.261 124 289 2.1E-73 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 N288_09640 7befb8fee60475db0d615326b7bd643d 300 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 1.3E-147 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 N288_09640 7befb8fee60475db0d615326b7bd643d 300 Pfam PF00549 CoA-ligase 151 262 3.7E-19 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 N288_09640 7befb8fee60475db0d615326b7bd643d 300 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 12-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site N288_00025 2c7fd9ece3f1d412ad0ace1a5b0e8c39 372 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 346 8.2E-18 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal N288_00025 2c7fd9ece3f1d412ad0ace1a5b0e8c39 372 ProSitePatterns PS00618 RecF protein signature 2. 312 330 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 N288_00025 2c7fd9ece3f1d412ad0ace1a5b0e8c39 372 Gene3D G3DSA:3.40.50.300 7 345 8.7E-112 T 12-10-2018 N288_00025 2c7fd9ece3f1d412ad0ace1a5b0e8c39 372 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 367 1.2E-136 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 N288_00025 2c7fd9ece3f1d412ad0ace1a5b0e8c39 372 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 372 105.204 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 N288_00025 2c7fd9ece3f1d412ad0ace1a5b0e8c39 372 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 N288_00025 2c7fd9ece3f1d412ad0ace1a5b0e8c39 372 Gene3D G3DSA:1.20.1050.90 119 311 8.7E-112 T 12-10-2018 N288_00025 2c7fd9ece3f1d412ad0ace1a5b0e8c39 372 SUPERFAMILY SSF52540 1 350 6.64E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_23200 d77afb0e5bd6094188d25ae6698ba10e 98 Pfam PF13175 AAA ATPase domain 6 85 1.7E-9 T 12-10-2018 N288_23200 d77afb0e5bd6094188d25ae6698ba10e 98 SUPERFAMILY SSF52540 5 54 2.0E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_23200 d77afb0e5bd6094188d25ae6698ba10e 98 Gene3D G3DSA:3.40.50.300 5 95 1.1E-11 T 12-10-2018 N288_24550 77f45a5490adf8135ed541f01c929a5b 299 Pfam PF01636 Phosphotransferase enzyme family 6 213 1.2E-22 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase N288_24550 77f45a5490adf8135ed541f01c929a5b 299 Gene3D G3DSA:3.90.1200.10 84 290 1.0E-22 T 12-10-2018 N288_24550 77f45a5490adf8135ed541f01c929a5b 299 SUPERFAMILY SSF56112 5 286 1.02E-44 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_07510 6cbe681ba915a7185060d8d15d189b87 269 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 269 16.602 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 N288_07510 6cbe681ba915a7185060d8d15d189b87 269 Pfam PF02673 Bacitracin resistance protein BacA 10 262 7.4E-75 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 N288_11655 06f05fc87e82ddb8628eac7e8bd54bb9 40 Pfam PF10262 Rdx family 2 38 1.5E-9 T 12-10-2018 IPR011893 Selenoprotein, Rdx-type N288_11655 06f05fc87e82ddb8628eac7e8bd54bb9 40 Gene3D G3DSA:3.40.30.10 1 40 9.7E-13 T 12-10-2018 N288_11655 06f05fc87e82ddb8628eac7e8bd54bb9 40 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 4 38 1.5E-11 T 12-10-2018 IPR011893 Selenoprotein, Rdx-type N288_11655 06f05fc87e82ddb8628eac7e8bd54bb9 40 SUPERFAMILY SSF52833 2 38 3.35E-8 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_01230 60ffec0a095c155721606e2e24797ba2 143 ProSitePatterns PS00818 Dps protein family signature 1. 25 41 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 N288_01230 60ffec0a095c155721606e2e24797ba2 143 SUPERFAMILY SSF47240 2 142 5.5E-43 T 12-10-2018 IPR009078 Ferritin-like superfamily N288_01230 60ffec0a095c155721606e2e24797ba2 143 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 120 138 5.1E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps N288_01230 60ffec0a095c155721606e2e24797ba2 143 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 49 65 5.1E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps N288_01230 60ffec0a095c155721606e2e24797ba2 143 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 25 41 5.1E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps N288_01230 60ffec0a095c155721606e2e24797ba2 143 Pfam PF00210 Ferritin-like domain 5 142 3.4E-31 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 N288_01230 60ffec0a095c155721606e2e24797ba2 143 PIRSF PIRSF005900 1 143 2.0E-49 T 12-10-2018 IPR002177 DNA-binding protein Dps N288_01230 60ffec0a095c155721606e2e24797ba2 143 Gene3D G3DSA:1.20.1260.10 1 143 6.7E-53 T 12-10-2018 IPR012347 Ferritin-like N288_15875 fc2cf6e22b1b64d2ac6c8a2667783040 485 Gene3D G3DSA:3.40.50.300 1 208 2.9E-77 T 12-10-2018 N288_15875 fc2cf6e22b1b64d2ac6c8a2667783040 485 Pfam PF00271 Helicase conserved C-terminal domain 228 336 2.2E-30 T 12-10-2018 IPR001650 Helicase, C-terminal N288_15875 fc2cf6e22b1b64d2ac6c8a2667783040 485 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 150 158 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site N288_15875 fc2cf6e22b1b64d2ac6c8a2667783040 485 SMART SM00490 255 336 8.7E-34 T 12-10-2018 IPR001650 Helicase, C-terminal N288_15875 fc2cf6e22b1b64d2ac6c8a2667783040 485 Gene3D G3DSA:3.40.50.300 211 429 4.1E-53 T 12-10-2018 N288_15875 fc2cf6e22b1b64d2ac6c8a2667783040 485 SUPERFAMILY SSF52540 69 357 2.5E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_15875 fc2cf6e22b1b64d2ac6c8a2667783040 485 SMART SM00487 21 219 3.2E-63 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_15875 fc2cf6e22b1b64d2ac6c8a2667783040 485 Pfam PF00270 DEAD/DEAH box helicase 26 192 5.5E-49 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 Gene3D G3DSA:1.10.472.90 818 942 3.9E-284 T 12-10-2018 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 Pfam PF00289 Biotin carboxylase, N-terminal domain 5 113 2.6E-42 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 157 171 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 SUPERFAMILY SSF56059 87 334 2.3E-68 T 12-10-2018 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 Pfam PF02785 Biotin carboxylase C-terminal domain 345 452 6.9E-32 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 Pfam PF00364 Biotin-requiring enzyme 1078 1144 4.8E-18 T 12-10-2018 IPR000089 Biotin/lipoyl attachment N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 SUPERFAMILY SSF51230 1069 1144 7.07E-22 T 12-10-2018 IPR011053 Single hybrid motif N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 Pfam PF02436 Conserved carboxylase domain 828 1028 5.6E-75 T 12-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 Gene3D G3DSA:3.10.600.10 463 513 7.9E-9 T 12-10-2018 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 SUPERFAMILY SSF51246 340 458 1.05E-37 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 Gene3D G3DSA:3.30.470.130 1 460 2.1E-192 T 12-10-2018 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 Gene3D G3DSA:3.20.20.70 514 817 3.9E-284 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 SUPERFAMILY SSF51569 525 836 6.23E-83 T 12-10-2018 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 Gene3D G3DSA:1.10.10.2790 943 978 3.9E-284 T 12-10-2018 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 SUPERFAMILY SSF89000 833 1010 1.49E-56 T 12-10-2018 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 7 1144 0.0 T 12-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 119 325 1.1E-75 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 Gene3D G3DSA:3.10.600.10 979 1058 3.9E-284 T 12-10-2018 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 SMART SM00878 345 452 2.2E-50 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 Pfam PF00682 HMGL-like 533 805 1.9E-27 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 Gene3D G3DSA:2.40.50.100 1068 1145 1.8E-24 T 12-10-2018 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 PIRSF PIRSF001594 1 1146 0.0 T 12-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 N288_08940 bd3a94117bbdf7e914e788a1bdfcf461 1146 SUPERFAMILY SSF52440 3 116 7.19E-45 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily N288_24230 55b1a915c3beb23d1210b0761f33e7c1 588 SMART SM00382 367 554 6.0E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_24230 55b1a915c3beb23d1210b0761f33e7c1 588 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_24230 55b1a915c3beb23d1210b0761f33e7c1 588 Pfam PF00005 ABC transporter 360 508 1.4E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_24230 55b1a915c3beb23d1210b0761f33e7c1 588 Gene3D G3DSA:3.40.50.300 335 585 2.9E-91 T 12-10-2018 N288_24230 55b1a915c3beb23d1210b0761f33e7c1 588 SUPERFAMILY SSF90123 20 328 1.44E-73 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_24230 55b1a915c3beb23d1210b0761f33e7c1 588 Gene3D G3DSA:1.20.1560.10 1 331 1.9E-82 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_24230 55b1a915c3beb23d1210b0761f33e7c1 588 Pfam PF00664 ABC transporter transmembrane region 33 298 7.9E-47 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 N288_24230 55b1a915c3beb23d1210b0761f33e7c1 588 SUPERFAMILY SSF52540 335 578 5.77E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_13005 4123b0b4300ee83da8ed8904252da202 107 SUPERFAMILY SSF46785 6 105 6.17E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_13005 4123b0b4300ee83da8ed8904252da202 107 Pfam PF01638 HxlR-like helix-turn-helix 16 103 3.5E-30 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type N288_13005 4123b0b4300ee83da8ed8904252da202 107 Gene3D G3DSA:1.10.10.10 3 107 1.2E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_11805 8fbc9b023020dc79683ebbb81804920f 813 Gene3D G3DSA:3.90.199.10 34 486 1.9E-199 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 N288_11805 8fbc9b023020dc79683ebbb81804920f 813 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 11 749 0.0 T 12-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 N288_11805 8fbc9b023020dc79683ebbb81804920f 813 Gene3D G3DSA:1.10.268.10 371 460 1.9E-199 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 N288_11805 8fbc9b023020dc79683ebbb81804920f 813 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 9 807 33.43 T 12-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 N288_11805 8fbc9b023020dc79683ebbb81804920f 813 Gene3D G3DSA:3.30.1360.40 238 334 1.9E-199 T 12-10-2018 N288_11805 8fbc9b023020dc79683ebbb81804920f 813 Gene3D G3DSA:2.120.10.90 502 812 6.2E-104 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal N288_11805 8fbc9b023020dc79683ebbb81804920f 813 SMART SM00434 13 466 2.3E-265 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 N288_11805 8fbc9b023020dc79683ebbb81804920f 813 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 473 5.3E-152 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 N288_11805 8fbc9b023020dc79683ebbb81804920f 813 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 15 797 6.8E-273 T 12-10-2018 N288_11805 8fbc9b023020dc79683ebbb81804920f 813 SUPERFAMILY SSF56719 33 488 1.31E-170 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 N288_11805 8fbc9b023020dc79683ebbb81804920f 813 SUPERFAMILY SSF101904 502 806 7.98E-92 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal N288_11805 8fbc9b023020dc79683ebbb81804920f 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 711 757 2.0E-5 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 N288_11805 8fbc9b023020dc79683ebbb81804920f 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 507 522 0.33 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 N288_11805 8fbc9b023020dc79683ebbb81804920f 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 657 703 2.0E-10 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 N288_11805 8fbc9b023020dc79683ebbb81804920f 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 609 653 2.1E-6 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 N288_11805 8fbc9b023020dc79683ebbb81804920f 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 552 601 6.1E-4 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 N288_05000 92d9fe274e75a0715bada9d73a02f64b 214 Gene3D G3DSA:1.10.3720.10 1 213 4.5E-59 T 12-10-2018 IPR035906 MetI-like superfamily N288_05000 92d9fe274e75a0715bada9d73a02f64b 214 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 106 1.8E-29 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 N288_05000 92d9fe274e75a0715bada9d73a02f64b 214 SUPERFAMILY SSF161098 9 197 3.53E-50 T 12-10-2018 IPR035906 MetI-like superfamily N288_05000 92d9fe274e75a0715bada9d73a02f64b 214 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 210 2.6E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_05710 f682ef77c55123b5b75af7f6103146a3 334 SUPERFAMILY SSF161098 89 318 9.81E-22 T 12-10-2018 IPR035906 MetI-like superfamily N288_05710 f682ef77c55123b5b75af7f6103146a3 334 Gene3D G3DSA:1.10.3720.10 90 328 2.1E-23 T 12-10-2018 IPR035906 MetI-like superfamily N288_05710 f682ef77c55123b5b75af7f6103146a3 334 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 332 3.7E-43 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_08325 d8f97f42dda7cf0fcbd776dad82af20e 451 Pfam PF02386 Cation transport protein 45 428 1.0E-60 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 N288_07475 bf141784e7100bb51caab090d970a0a1 343 SMART SM00859 2 139 4.4E-38 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 N288_07475 bf141784e7100bb51caab090d970a0a1 343 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 337 41.445 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 N288_07475 bf141784e7100bb51caab090d970a0a1 343 SUPERFAMILY SSF51735 2 169 4.15E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_07475 bf141784e7100bb51caab090d970a0a1 343 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 1 343 4.2E-129 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 N288_07475 bf141784e7100bb51caab090d970a0a1 343 Gene3D G3DSA:3.30.360.10 145 311 4.4E-122 T 12-10-2018 N288_07475 bf141784e7100bb51caab090d970a0a1 343 Gene3D G3DSA:3.40.50.720 3 329 4.4E-122 T 12-10-2018 N288_07475 bf141784e7100bb51caab090d970a0a1 343 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 138 5.4E-26 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 N288_07475 bf141784e7100bb51caab090d970a0a1 343 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 162 314 1.1E-27 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 N288_07475 bf141784e7100bb51caab090d970a0a1 343 SUPERFAMILY SSF55347 147 311 1.86E-53 T 12-10-2018 N288_07475 bf141784e7100bb51caab090d970a0a1 343 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 142 158 - T 12-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 N288_05720 a0c9392dc547bf79545358f6f8d2945c 359 Pfam PF06081 Aromatic acid exporter family member 1 1 142 1.7E-43 T 12-10-2018 IPR010343 Aromatic acid exporter family member 1 N288_25725 447ce015ff3f155d0e752ad6b3f251cd 496 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 N288_25725 447ce015ff3f155d0e752ad6b3f251cd 496 PIRSF PIRSF000538 2 496 9.3E-183 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 N288_25725 447ce015ff3f155d0e752ad6b3f251cd 496 Gene3D G3DSA:3.30.420.40 253 496 5.2E-92 T 12-10-2018 N288_25725 447ce015ff3f155d0e752ad6b3f251cd 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 251 1.0E-87 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 N288_25725 447ce015ff3f155d0e752ad6b3f251cd 496 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 494 6.9E-229 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 N288_25725 447ce015ff3f155d0e752ad6b3f251cd 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 449 7.4E-65 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 N288_25725 447ce015ff3f155d0e752ad6b3f251cd 496 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 N288_25725 447ce015ff3f155d0e752ad6b3f251cd 496 SUPERFAMILY SSF53067 3 254 7.13E-97 T 12-10-2018 N288_25725 447ce015ff3f155d0e752ad6b3f251cd 496 Gene3D G3DSA:3.30.420.40 1 252 2.3E-112 T 12-10-2018 N288_25725 447ce015ff3f155d0e752ad6b3f251cd 496 SUPERFAMILY SSF53067 254 492 2.59E-85 T 12-10-2018 N288_25725 447ce015ff3f155d0e752ad6b3f251cd 496 Hamap MF_00186 Glycerol kinase [glpK]. 2 496 59.353 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 N288_02445 958fad57a2fdfd8672df29b4f6405622 338 Pfam PF02016 LD-carboxypeptidase 13 323 2.5E-67 T 12-10-2018 IPR003507 Peptidase family S66 N288_02445 958fad57a2fdfd8672df29b4f6405622 338 PIRSF PIRSF028757 1 337 7.0E-59 T 12-10-2018 IPR003507 Peptidase family S66 N288_02445 958fad57a2fdfd8672df29b4f6405622 338 SUPERFAMILY SSF52317 1 159 1.19E-33 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_02445 958fad57a2fdfd8672df29b4f6405622 338 Gene3D G3DSA:3.40.50.10740 2 158 3.5E-29 T 12-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal N288_02445 958fad57a2fdfd8672df29b4f6405622 338 SUPERFAMILY SSF141986 172 328 1.83E-28 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily N288_02445 958fad57a2fdfd8672df29b4f6405622 338 Gene3D G3DSA:3.50.30.60 160 336 9.2E-36 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily N288_19805 43ad9ee26d8d76f4e4d2a5187f072e76 528 Gene3D G3DSA:3.30.300.310 419 526 1.1E-28 T 12-10-2018 N288_19805 43ad9ee26d8d76f4e4d2a5187f072e76 528 SUPERFAMILY SSF56801 22 523 1.57E-141 T 12-10-2018 N288_19805 43ad9ee26d8d76f4e4d2a5187f072e76 528 Pfam PF00501 AMP-binding enzyme 22 423 2.0E-80 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 N288_19805 43ad9ee26d8d76f4e4d2a5187f072e76 528 Gene3D G3DSA:3.40.50.12780 2 416 3.5E-110 T 12-10-2018 N288_19805 43ad9ee26d8d76f4e4d2a5187f072e76 528 ProSitePatterns PS00455 Putative AMP-binding domain signature. 175 186 - T 12-10-2018 IPR020845 AMP-binding, conserved site N288_19805 43ad9ee26d8d76f4e4d2a5187f072e76 528 Pfam PF13193 AMP-binding enzyme C-terminal domain 432 511 2.2E-23 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain N288_09570 9994c19f78a77e99b297efa8942ac383 449 SMART SM00382 100 278 1.3E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_09570 9994c19f78a77e99b297efa8942ac383 449 SMART SM00963 2 87 7.5E-34 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 N288_09570 9994c19f78a77e99b297efa8942ac383 449 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 429 3.1E-192 T 12-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 N288_09570 9994c19f78a77e99b297efa8942ac383 449 Gene3D G3DSA:3.40.50.300 91 286 4.2E-129 T 12-10-2018 N288_09570 9994c19f78a77e99b297efa8942ac383 449 SMART SM00962 101 297 9.7E-121 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 N288_09570 9994c19f78a77e99b297efa8942ac383 449 Gene3D G3DSA:1.20.120.140 6 307 4.2E-129 T 12-10-2018 N288_09570 9994c19f78a77e99b297efa8942ac383 449 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 2.6E-22 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 N288_09570 9994c19f78a77e99b297efa8942ac383 449 Gene3D G3DSA:1.10.260.30 328 446 5.4E-45 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 N288_09570 9994c19f78a77e99b297efa8942ac383 449 SUPERFAMILY SSF47446 329 430 1.28E-37 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 N288_09570 9994c19f78a77e99b297efa8942ac383 449 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 437 35.648 T 12-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 N288_09570 9994c19f78a77e99b297efa8942ac383 449 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 5.1E-79 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 N288_09570 9994c19f78a77e99b297efa8942ac383 449 SUPERFAMILY SSF52540 43 355 2.2E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_09570 9994c19f78a77e99b297efa8942ac383 449 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 N288_09570 9994c19f78a77e99b297efa8942ac383 449 Pfam PF02978 Signal peptide binding domain 329 427 1.3E-33 T 12-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 N288_21560 8eba09532cc4c51a326e4476deefda99 155 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 77.948 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 N288_21560 8eba09532cc4c51a326e4476deefda99 155 Gene3D G3DSA:2.40.280.10 3 128 9.0E-54 T 12-10-2018 IPR023620 Small protein B N288_21560 8eba09532cc4c51a326e4476deefda99 155 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 11 132 2.0E-55 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 N288_21560 8eba09532cc4c51a326e4476deefda99 155 Pfam PF01668 SmpB protein 9 150 1.2E-63 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 N288_21560 8eba09532cc4c51a326e4476deefda99 155 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 12-10-2018 IPR020081 SsrA-binding protein, conserved site N288_21560 8eba09532cc4c51a326e4476deefda99 155 TIGRFAM TIGR00086 smpB: SsrA-binding protein 8 149 1.3E-59 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 N288_21560 8eba09532cc4c51a326e4476deefda99 155 SUPERFAMILY SSF74982 4 132 5.62E-55 T 12-10-2018 IPR023620 Small protein B N288_19640 778071780cc8d796410d5c83119e7db2 304 PIRSF PIRSF000532 1 304 3.9E-111 T 12-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 N288_19640 778071780cc8d796410d5c83119e7db2 304 Gene3D G3DSA:3.40.50.460 127 236 7.7E-111 T 12-10-2018 N288_19640 778071780cc8d796410d5c83119e7db2 304 Pfam PF00365 Phosphofructokinase 1 260 1.4E-104 T 12-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 N288_19640 778071780cc8d796410d5c83119e7db2 304 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 105 122 4.5E-73 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 N288_19640 778071780cc8d796410d5c83119e7db2 304 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 123 141 4.5E-73 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 N288_19640 778071780cc8d796410d5c83119e7db2 304 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 16 29 4.5E-73 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 N288_19640 778071780cc8d796410d5c83119e7db2 304 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 143 159 4.5E-73 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 N288_19640 778071780cc8d796410d5c83119e7db2 304 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 161 178 4.5E-73 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 N288_19640 778071780cc8d796410d5c83119e7db2 304 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 197 209 4.5E-73 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 N288_19640 778071780cc8d796410d5c83119e7db2 304 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 224 246 4.5E-73 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 N288_19640 778071780cc8d796410d5c83119e7db2 304 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 78 94 4.5E-73 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 N288_19640 778071780cc8d796410d5c83119e7db2 304 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 303 43.372 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 N288_19640 778071780cc8d796410d5c83119e7db2 304 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 1 284 1.8E-128 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 N288_19640 778071780cc8d796410d5c83119e7db2 304 SUPERFAMILY SSF53784 1 299 1.44E-109 T 12-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 N288_19640 778071780cc8d796410d5c83119e7db2 304 ProSitePatterns PS00433 Phosphofructokinase signature. 228 246 - T 12-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 N288_19640 778071780cc8d796410d5c83119e7db2 304 Gene3D G3DSA:3.40.50.450 1 263 7.7E-111 T 12-10-2018 N288_01345 679dd2c3efae4b1e72b552156b0ecb22 205 PIRSF PIRSF000709 3 166 2.4E-24 T 12-10-2018 N288_01345 679dd2c3efae4b1e72b552156b0ecb22 205 SUPERFAMILY SSF53254 3 202 1.94E-54 T 12-10-2018 IPR029033 Histidine phosphatase superfamily N288_01345 679dd2c3efae4b1e72b552156b0ecb22 205 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 197 4.1E-56 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 N288_01345 679dd2c3efae4b1e72b552156b0ecb22 205 Gene3D G3DSA:3.40.50.1240 2 203 2.1E-63 T 12-10-2018 IPR029033 Histidine phosphatase superfamily N288_01345 679dd2c3efae4b1e72b552156b0ecb22 205 SMART SM00855 3 157 1.0E-20 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 N288_24715 39dfa2bc0c5f59ed1b876e6d53bc3594 241 Pfam PF04239 Protein of unknown function (DUF421) 92 208 1.2E-26 T 12-10-2018 IPR007353 Protein of unknown function DUF421 N288_24715 39dfa2bc0c5f59ed1b876e6d53bc3594 241 Gene3D G3DSA:3.30.240.20 87 157 1.2E-17 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily N288_24715 39dfa2bc0c5f59ed1b876e6d53bc3594 241 Gene3D G3DSA:3.30.240.20 173 234 1.1E-13 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily N288_07820 74bbbecc30b1136de8b3a38122e34c06 187 SUPERFAMILY SSF46689 2 68 2.29E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_07820 74bbbecc30b1136de8b3a38122e34c06 187 Gene3D G3DSA:1.10.357.10 46 187 2.2E-31 T 12-10-2018 N288_07820 74bbbecc30b1136de8b3a38122e34c06 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 49 1.7E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_07820 74bbbecc30b1136de8b3a38122e34c06 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 5 18 1.7E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_07820 74bbbecc30b1136de8b3a38122e34c06 187 SUPERFAMILY SSF48498 74 186 3.77E-22 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily N288_07820 74bbbecc30b1136de8b3a38122e34c06 187 Gene3D G3DSA:1.10.10.60 1 45 1.2E-18 T 12-10-2018 N288_07820 74bbbecc30b1136de8b3a38122e34c06 187 ProSitePatterns PS01081 TetR-type HTH domain signature. 17 48 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site N288_07820 74bbbecc30b1136de8b3a38122e34c06 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 5 48 3.4E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_10470 77f2317ce23f9f01736d317b5accdccb 497 PIRSF PIRSF005690 17 496 9.0E-142 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 N288_10470 77f2317ce23f9f01736d317b5accdccb 497 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 31 481 6.7E-148 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 N288_24870 c1c019bfea0611dba6dace04ce984b0b 172 SUPERFAMILY SSF52980 63 164 1.18E-12 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 N288_24870 c1c019bfea0611dba6dace04ce984b0b 172 Pfam PF04471 Restriction endonuclease 53 161 4.0E-14 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 N288_14590 c86ef1c5eea109887830d10041f0fc15 745 Gene3D G3DSA:3.30.565.10 595 745 1.0E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_14590 c86ef1c5eea109887830d10041f0fc15 745 Gene3D G3DSA:1.10.287.130 517 589 2.4E-21 T 12-10-2018 N288_14590 c86ef1c5eea109887830d10041f0fc15 745 SMART SM00387 636 745 3.4E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_14590 c86ef1c5eea109887830d10041f0fc15 745 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 640 743 3.3E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_14590 c86ef1c5eea109887830d10041f0fc15 745 SUPERFAMILY SSF55874 595 743 4.82E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_14590 c86ef1c5eea109887830d10041f0fc15 745 SMART SM00388 524 590 1.9E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_14590 c86ef1c5eea109887830d10041f0fc15 745 SUPERFAMILY SSF47384 509 591 9.81E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_14590 c86ef1c5eea109887830d10041f0fc15 745 Pfam PF00512 His Kinase A (phospho-acceptor) domain 525 590 2.1E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_10525 a024042808f10f4eca1acdc940ae96b2 273 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 224 237 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 N288_10525 a024042808f10f4eca1acdc940ae96b2 273 Gene3D G3DSA:3.40.1190.20 2 269 4.3E-42 T 12-10-2018 IPR029056 Ribokinase-like N288_10525 a024042808f10f4eca1acdc940ae96b2 273 Pfam PF00294 pfkB family carbohydrate kinase 17 265 2.0E-30 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB N288_10525 a024042808f10f4eca1acdc940ae96b2 273 SUPERFAMILY SSF53613 1 267 1.87E-43 T 12-10-2018 IPR029056 Ribokinase-like N288_08920 8b859e8009cabedb25f5c1c31dea2a9f 442 SMART SM00670 3 135 2.0E-24 T 12-10-2018 IPR002716 PIN domain N288_08920 8b859e8009cabedb25f5c1c31dea2a9f 442 SUPERFAMILY SSF52540 24 422 8.5E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_08920 8b859e8009cabedb25f5c1c31dea2a9f 442 Gene3D G3DSA:3.40.50.1010 2 150 5.7E-23 T 12-10-2018 N288_08920 8b859e8009cabedb25f5c1c31dea2a9f 442 Gene3D G3DSA:3.40.50.300 231 441 2.0E-69 T 12-10-2018 N288_08920 8b859e8009cabedb25f5c1c31dea2a9f 442 Pfam PF13638 PIN domain 5 147 7.9E-35 T 12-10-2018 IPR002716 PIN domain N288_08920 8b859e8009cabedb25f5c1c31dea2a9f 442 Pfam PF02562 PhoH-like protein 233 436 3.3E-54 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 N288_18210 c2a817fb23915bbbb2b00785c607dda1 329 SUPERFAMILY SSF53850 54 326 8.31E-75 T 12-10-2018 N288_18210 c2a817fb23915bbbb2b00785c607dda1 329 Gene3D G3DSA:3.40.190.10 135 275 1.5E-91 T 12-10-2018 N288_18210 c2a817fb23915bbbb2b00785c607dda1 329 Gene3D G3DSA:3.40.190.10 56 311 1.5E-91 T 12-10-2018 N288_18210 c2a817fb23915bbbb2b00785c607dda1 329 Pfam PF12849 PBP superfamily domain 48 298 1.5E-36 T 12-10-2018 IPR024370 PBP domain N288_18210 c2a817fb23915bbbb2b00785c607dda1 329 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 9 313 1.0E-90 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 N288_17925 1dfd175e181b4db81d071600b201569e 146 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 142 7.9E-60 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 N288_17925 1dfd175e181b4db81d071600b201569e 146 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 12-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 N288_17925 1dfd175e181b4db81d071600b201569e 146 SUPERFAMILY SSF52304 3 143 4.19E-58 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 N288_17925 1dfd175e181b4db81d071600b201569e 146 PIRSF PIRSF001399 1 146 2.4E-60 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 N288_17925 1dfd175e181b4db81d071600b201569e 146 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 17 142 4.0E-31 T 12-10-2018 N288_17925 1dfd175e181b4db81d071600b201569e 146 Gene3D G3DSA:3.40.50.9100 1 146 1.2E-64 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 N288_17925 1dfd175e181b4db81d071600b201569e 146 Pfam PF01220 Dehydroquinase class II 3 140 5.0E-59 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 N288_17925 1dfd175e181b4db81d071600b201569e 146 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 146 64.918 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 N288_08540 a1748937df7137d772d93ccee5748d21 571 SUPERFAMILY SSF51621 249 549 1.18E-114 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 N288_08540 a1748937df7137d772d93ccee5748d21 571 SUPERFAMILY SSF52009 125 243 1.06E-38 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 N288_08540 a1748937df7137d772d93ccee5748d21 571 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 4 565 2.0E-258 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 N288_08540 a1748937df7137d772d93ccee5748d21 571 Gene3D G3DSA:3.20.20.60 236 569 7.1E-129 T 12-10-2018 N288_08540 a1748937df7137d772d93ccee5748d21 571 PIRSF PIRSF000732 1 571 3.2E-230 T 12-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 N288_08540 a1748937df7137d772d93ccee5748d21 571 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 N288_08540 a1748937df7137d772d93ccee5748d21 571 Gene3D G3DSA:1.10.274.10 23 146 1.2E-83 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 N288_08540 a1748937df7137d772d93ccee5748d21 571 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 539 4.2E-130 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 N288_08540 a1748937df7137d772d93ccee5748d21 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 9.8E-33 T 12-10-2018 N288_08540 a1748937df7137d772d93ccee5748d21 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 9.8E-33 T 12-10-2018 N288_08540 a1748937df7137d772d93ccee5748d21 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 9.8E-33 T 12-10-2018 N288_08540 a1748937df7137d772d93ccee5748d21 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 9.8E-33 T 12-10-2018 N288_08540 a1748937df7137d772d93ccee5748d21 571 Gene3D G3DSA:3.50.30.10 6 235 1.2E-83 T 12-10-2018 N288_08540 a1748937df7137d772d93ccee5748d21 571 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 N288_08540 a1748937df7137d772d93ccee5748d21 571 Pfam PF00391 PEP-utilising enzyme, mobile domain 153 225 4.3E-25 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 N288_08540 a1748937df7137d772d93ccee5748d21 571 SUPERFAMILY SSF47831 23 143 1.15E-38 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 N288_08540 a1748937df7137d772d93ccee5748d21 571 Pfam PF05524 PEP-utilising enzyme, N-terminal 5 126 2.8E-35 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 N288_12500 1611b962591e383e6cb1509e38308034 252 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 45.146 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 N288_12500 1611b962591e383e6cb1509e38308034 252 Pfam PF03746 LamB/YcsF family 4 242 3.0E-102 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 N288_12500 1611b962591e383e6cb1509e38308034 252 Gene3D G3DSA:3.20.20.370 2 252 1.1E-105 T 12-10-2018 N288_12500 1611b962591e383e6cb1509e38308034 252 SUPERFAMILY SSF88713 3 251 3.78E-99 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 N288_23260 cd2e6b2152c67e1ddb6897264cf971d6 217 SUPERFAMILY SSF46785 19 151 2.0E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_23260 cd2e6b2152c67e1ddb6897264cf971d6 217 Pfam PF13412 Winged helix-turn-helix DNA-binding 18 60 1.8E-9 T 12-10-2018 N288_23260 cd2e6b2152c67e1ddb6897264cf971d6 217 Pfam PF08484 C-methyltransferase C-terminal domain 98 202 6.4E-6 T 12-10-2018 IPR013691 C-methyltransferase N288_23260 cd2e6b2152c67e1ddb6897264cf971d6 217 Gene3D G3DSA:3.40.50.720 114 208 6.3E-10 T 12-10-2018 N288_23260 cd2e6b2152c67e1ddb6897264cf971d6 217 Gene3D G3DSA:1.10.10.10 11 90 2.6E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_10635 9ce049da014bd2238cf513689a26c564 401 SUPERFAMILY SSF103642 378 399 1.62E-8 T 12-10-2018 N288_10635 9ce049da014bd2238cf513689a26c564 401 Pfam PF02810 SEC-C motif 381 399 1.7E-10 T 12-10-2018 IPR004027 SEC-C motif N288_10635 9ce049da014bd2238cf513689a26c564 401 Gene3D G3DSA:3.10.450.50 350 401 3.9E-10 T 12-10-2018 N288_11985 a9e81bc02c63905fe122e1188df42cb1 392 Pfam PF07687 Peptidase dimerisation domain 170 258 5.0E-10 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain N288_11985 a9e81bc02c63905fe122e1188df42cb1 392 PIRSF PIRSF037226 1 392 6.2E-172 T 12-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted N288_11985 a9e81bc02c63905fe122e1188df42cb1 392 Gene3D G3DSA:3.30.70.360 164 281 9.1E-137 T 12-10-2018 N288_11985 a9e81bc02c63905fe122e1188df42cb1 392 SUPERFAMILY SSF53187 3 375 1.1E-60 T 12-10-2018 N288_11985 a9e81bc02c63905fe122e1188df42cb1 392 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 345 2.2E-64 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 N288_11985 a9e81bc02c63905fe122e1188df42cb1 392 SUPERFAMILY SSF55031 166 272 8.37E-23 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_11985 a9e81bc02c63905fe122e1188df42cb1 392 Gene3D G3DSA:3.40.630.10 18 361 9.1E-137 T 12-10-2018 N288_04465 3b9184ff9e15fa525c17b8f50d1c4ce7 377 Pfam PF01321 Creatinase/Prolidase N-terminal domain 6 143 4.2E-21 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 N288_04465 3b9184ff9e15fa525c17b8f50d1c4ce7 377 Gene3D G3DSA:3.90.230.10 144 377 1.0E-62 T 12-10-2018 N288_04465 3b9184ff9e15fa525c17b8f50d1c4ce7 377 Pfam PF00557 Metallopeptidase family M24 151 358 5.7E-46 T 12-10-2018 IPR000994 Peptidase M24 N288_04465 3b9184ff9e15fa525c17b8f50d1c4ce7 377 SUPERFAMILY SSF55920 143 373 2.49E-61 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like N288_04465 3b9184ff9e15fa525c17b8f50d1c4ce7 377 SUPERFAMILY SSF53092 5 141 1.69E-21 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal N288_04465 3b9184ff9e15fa525c17b8f50d1c4ce7 377 Gene3D G3DSA:3.40.350.10 2 143 9.8E-24 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal N288_13255 2396a09181f1bd68bbb3dcac7f0144a4 249 Gene3D G3DSA:3.40.50.1400 123 243 3.2E-18 T 12-10-2018 N288_13255 2396a09181f1bd68bbb3dcac7f0144a4 249 Gene3D G3DSA:3.40.50.1400 1 120 3.7E-24 T 12-10-2018 N288_13255 2396a09181f1bd68bbb3dcac7f0144a4 249 Pfam PF01903 CbiX 9 113 9.3E-26 T 12-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 N288_13255 2396a09181f1bd68bbb3dcac7f0144a4 249 Pfam PF01903 CbiX 134 234 3.1E-15 T 12-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 N288_13255 2396a09181f1bd68bbb3dcac7f0144a4 249 SUPERFAMILY SSF53800 2 236 2.83E-42 T 12-10-2018 N288_15345 b9050e7c0a75db7502fe9535d782b20d 373 SUPERFAMILY SSF51395 5 339 1.53E-95 T 12-10-2018 N288_15345 b9050e7c0a75db7502fe9535d782b20d 373 Gene3D G3DSA:3.20.20.70 3 369 4.8E-112 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_15345 b9050e7c0a75db7502fe9535d782b20d 373 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 340 4.1E-89 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 N288_04750 caa1f912d6744f3c2fdf8b6397dcc227 143 Gene3D G3DSA:3.90.79.10 2 143 3.3E-22 T 12-10-2018 N288_04750 caa1f912d6744f3c2fdf8b6397dcc227 143 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_04750 caa1f912d6744f3c2fdf8b6397dcc227 143 Pfam PF00293 NUDIX domain 7 126 2.3E-12 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_04750 caa1f912d6744f3c2fdf8b6397dcc227 143 SUPERFAMILY SSF55811 6 129 1.76E-20 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_08620 c1078a8f5127275f2d50c5fe85ecdf33 170 Gene3D G3DSA:2.40.440.10 57 170 2.0E-41 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like N288_08620 c1078a8f5127275f2d50c5fe85ecdf33 170 SMART SM00257 7 52 8.0E-11 T 12-10-2018 IPR018392 LysM domain N288_08620 c1078a8f5127275f2d50c5fe85ecdf33 170 SUPERFAMILY SSF54106 6 52 7.19E-10 T 12-10-2018 N288_08620 c1078a8f5127275f2d50c5fe85ecdf33 170 Pfam PF03734 L,D-transpeptidase catalytic domain 64 168 7.4E-16 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 N288_08620 c1078a8f5127275f2d50c5fe85ecdf33 170 Gene3D G3DSA:3.10.350.10 5 56 3.0E-12 T 12-10-2018 IPR036779 LysM domain superfamily N288_08620 c1078a8f5127275f2d50c5fe85ecdf33 170 SUPERFAMILY SSF141523 61 169 1.24E-32 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like N288_08620 c1078a8f5127275f2d50c5fe85ecdf33 170 Pfam PF01476 LysM domain 8 52 8.3E-9 T 12-10-2018 IPR018392 LysM domain N288_20340 b8247dccd18f290d2e3a4810f0d9a6cc 145 Gene3D G3DSA:1.20.1260.10 1 145 7.9E-54 T 12-10-2018 IPR012347 Ferritin-like N288_20340 b8247dccd18f290d2e3a4810f0d9a6cc 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 3.2E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps N288_20340 b8247dccd18f290d2e3a4810f0d9a6cc 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 27 43 3.2E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps N288_20340 b8247dccd18f290d2e3a4810f0d9a6cc 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 122 140 3.2E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps N288_20340 b8247dccd18f290d2e3a4810f0d9a6cc 145 Pfam PF00210 Ferritin-like domain 7 144 9.1E-32 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 N288_20340 b8247dccd18f290d2e3a4810f0d9a6cc 145 ProSitePatterns PS00818 Dps protein family signature 1. 27 43 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 N288_20340 b8247dccd18f290d2e3a4810f0d9a6cc 145 SUPERFAMILY SSF47240 4 145 1.08E-44 T 12-10-2018 IPR009078 Ferritin-like superfamily N288_20340 b8247dccd18f290d2e3a4810f0d9a6cc 145 PIRSF PIRSF005900 1 145 1.0E-45 T 12-10-2018 IPR002177 DNA-binding protein Dps N288_09445 975cecf8ffd0f58a5a5c8e1522f56231 214 Gene3D G3DSA:3.20.20.70 1 214 4.9E-95 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_09445 975cecf8ffd0f58a5a5c8e1522f56231 214 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 N288_09445 975cecf8ffd0f58a5a5c8e1522f56231 214 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 N288_09445 975cecf8ffd0f58a5a5c8e1522f56231 214 PIRSF PIRSF001461 1 214 1.5E-102 T 12-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 N288_09445 975cecf8ffd0f58a5a5c8e1522f56231 214 SUPERFAMILY SSF51366 1 213 7.07E-81 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 N288_09445 975cecf8ffd0f58a5a5c8e1522f56231 214 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 3 213 4.2E-98 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 N288_09445 975cecf8ffd0f58a5a5c8e1522f56231 214 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 200 8.2E-93 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 N288_08445 62c806ce382c45dbc20f524481c2ef78 532 ProSitePatterns PS00786 5'-nucleotidase signature 2. 89 100 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_08445 62c806ce382c45dbc20f524481c2ef78 532 SUPERFAMILY SSF56300 7 313 9.65E-78 T 12-10-2018 N288_08445 62c806ce382c45dbc20f524481c2ef78 532 Pfam PF00149 Calcineurin-like phosphoesterase 8 240 2.3E-12 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 N288_08445 62c806ce382c45dbc20f524481c2ef78 532 SUPERFAMILY SSF55816 311 522 1.96E-49 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_08445 62c806ce382c45dbc20f524481c2ef78 532 Pfam PF02872 5'-nucleotidase, C-terminal domain 315 485 2.1E-30 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_08445 62c806ce382c45dbc20f524481c2ef78 532 PRINTS PR01607 Apyrase family signature 188 205 2.3E-23 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_08445 62c806ce382c45dbc20f524481c2ef78 532 PRINTS PR01607 Apyrase family signature 223 246 2.3E-23 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_08445 62c806ce382c45dbc20f524481c2ef78 532 PRINTS PR01607 Apyrase family signature 369 392 2.3E-23 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_08445 62c806ce382c45dbc20f524481c2ef78 532 PRINTS PR01607 Apyrase family signature 5 23 2.3E-23 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_08445 62c806ce382c45dbc20f524481c2ef78 532 PRINTS PR01607 Apyrase family signature 250 270 2.3E-23 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_08445 62c806ce382c45dbc20f524481c2ef78 532 PRINTS PR01607 Apyrase family signature 459 478 2.3E-23 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_08445 62c806ce382c45dbc20f524481c2ef78 532 Gene3D G3DSA:3.60.21.10 6 313 3.7E-86 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_08445 62c806ce382c45dbc20f524481c2ef78 532 Gene3D G3DSA:3.90.780.10 314 523 4.6E-69 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_03545 619d7ee932a0308e3827a46eb183cd8c 181 Pfam PF08281 Sigma-70, region 4 125 171 2.2E-7 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_03545 619d7ee932a0308e3827a46eb183cd8c 181 SUPERFAMILY SSF88659 117 178 1.81E-10 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_03545 619d7ee932a0308e3827a46eb183cd8c 181 Gene3D G3DSA:1.10.10.10 112 180 6.1E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_02045 4cbff2d63e06bad4b379bdedcf525c9f 164 Pfam PF03703 Bacterial PH domain 77 153 3.1E-15 T 12-10-2018 IPR005182 Domain of unknown function DUF304 N288_25995 30d845c792c45449b95d3c375883060e 292 Pfam PF02195 ParB-like nuclease domain 40 128 7.9E-28 T 12-10-2018 IPR003115 ParB/Sulfiredoxin N288_25995 30d845c792c45449b95d3c375883060e 292 SMART SM00470 39 129 1.5E-37 T 12-10-2018 IPR003115 ParB/Sulfiredoxin N288_25995 30d845c792c45449b95d3c375883060e 292 Gene3D G3DSA:3.90.1530.30 52 115 1.3E-24 T 12-10-2018 N288_25995 30d845c792c45449b95d3c375883060e 292 Hamap MF_02015 Nucleoid occlusion protein [noc]. 3 290 38.314 T 12-10-2018 IPR023705 Nucleoid occlusion protein N288_25995 30d845c792c45449b95d3c375883060e 292 SUPERFAMILY SSF109709 123 228 3.66E-34 T 12-10-2018 N288_25995 30d845c792c45449b95d3c375883060e 292 TIGRFAM TIGR04285 nucleoid_noc: nucleoid occlusion protein 37 290 2.9E-114 T 12-10-2018 IPR023705 Nucleoid occlusion protein N288_25995 30d845c792c45449b95d3c375883060e 292 Gene3D G3DSA:1.10.10.2830 116 229 2.4E-36 T 12-10-2018 N288_25995 30d845c792c45449b95d3c375883060e 292 SUPERFAMILY SSF110849 39 131 3.14E-29 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily N288_25995 30d845c792c45449b95d3c375883060e 292 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 36 215 3.4E-61 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 N288_21685 6a9547b770babd8a92a527e8f38221f8 252 SUPERFAMILY SSF51366 1 252 4.24E-85 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 N288_21685 6a9547b770babd8a92a527e8f38221f8 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 252 1.5E-121 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 N288_21685 6a9547b770babd8a92a527e8f38221f8 252 Gene3D G3DSA:3.20.20.70 1 252 3.5E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_21685 6a9547b770babd8a92a527e8f38221f8 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 252 49.904 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 N288_21685 6a9547b770babd8a92a527e8f38221f8 252 Pfam PF00977 Histidine biosynthesis protein 5 235 1.5E-90 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 N288_05115 e5ea14916dc0e199068b46ea2d62b433 720 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 12 330 5.6E-78 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 N288_05115 e5ea14916dc0e199068b46ea2d62b433 720 Gene3D G3DSA:3.40.50.1700 355 604 3.1E-89 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 N288_05115 e5ea14916dc0e199068b46ea2d62b433 720 SUPERFAMILY SSF51445 4 369 1.58E-105 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_05115 e5ea14916dc0e199068b46ea2d62b433 720 Gene3D G3DSA:3.20.20.300 1 351 7.2E-134 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 N288_05115 e5ea14916dc0e199068b46ea2d62b433 720 Gene3D G3DSA:2.60.40.10 605 717 3.2E-31 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_05115 e5ea14916dc0e199068b46ea2d62b433 720 SMART SM01217 639 708 1.0E-23 T 12-10-2018 IPR026891 Fibronectin type III-like domain N288_05115 e5ea14916dc0e199068b46ea2d62b433 720 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 371 602 3.1E-54 T 12-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 N288_05115 e5ea14916dc0e199068b46ea2d62b433 720 PRINTS PR00133 Glycosyl hydrolase family 3 signature 181 197 3.7E-25 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 N288_05115 e5ea14916dc0e199068b46ea2d62b433 720 PRINTS PR00133 Glycosyl hydrolase family 3 signature 78 94 3.7E-25 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 N288_05115 e5ea14916dc0e199068b46ea2d62b433 720 PRINTS PR00133 Glycosyl hydrolase family 3 signature 97 116 3.7E-25 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 N288_05115 e5ea14916dc0e199068b46ea2d62b433 720 PRINTS PR00133 Glycosyl hydrolase family 3 signature 143 159 3.7E-25 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 N288_05115 e5ea14916dc0e199068b46ea2d62b433 720 PRINTS PR00133 Glycosyl hydrolase family 3 signature 251 269 3.7E-25 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 N288_05115 e5ea14916dc0e199068b46ea2d62b433 720 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 251 268 - T 12-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 N288_05115 e5ea14916dc0e199068b46ea2d62b433 720 Pfam PF14310 Fibronectin type III-like domain 639 708 4.9E-16 T 12-10-2018 IPR026891 Fibronectin type III-like domain N288_05115 e5ea14916dc0e199068b46ea2d62b433 720 SUPERFAMILY SSF52279 371 605 1.83E-53 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 N288_18285 bd4241d2a2d67f3024841bad8765b06e 263 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_18285 bd4241d2a2d67f3024841bad8765b06e 263 Gene3D G3DSA:3.40.50.300 1 253 4.5E-67 T 12-10-2018 N288_18285 bd4241d2a2d67f3024841bad8765b06e 263 Pfam PF00005 ABC transporter 23 171 1.8E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_18285 bd4241d2a2d67f3024841bad8765b06e 263 SUPERFAMILY SSF52540 5 230 2.31E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_18285 bd4241d2a2d67f3024841bad8765b06e 263 SMART SM00382 32 228 6.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_03380 1a76ae28df954065697271216f6db4db 334 SUPERFAMILY SSF144083 256 317 1.7E-18 T 12-10-2018 N288_03380 1a76ae28df954065697271216f6db4db 334 Pfam PF01544 CorA-like Mg2+ transporter protein 91 315 5.7E-38 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 N288_03380 1a76ae28df954065697271216f6db4db 334 SUPERFAMILY SSF143865 89 202 9.81E-9 T 12-10-2018 N288_03380 1a76ae28df954065697271216f6db4db 334 Gene3D G3DSA:1.20.58.340 244 320 8.6E-24 T 12-10-2018 N288_09365 6177de7e6cc9ee64f8c7494df1d97829 570 Pfam PF05670 Domain of unknown function (DUF814) 455 537 4.3E-29 T 12-10-2018 IPR008532 Domain of unknown function DUF814 N288_09365 6177de7e6cc9ee64f8c7494df1d97829 570 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 442 5.6E-167 T 12-10-2018 N288_09365 6177de7e6cc9ee64f8c7494df1d97829 570 Gene3D G3DSA:3.40.970.40 242 288 1.6E-14 T 12-10-2018 N288_09365 6177de7e6cc9ee64f8c7494df1d97829 570 Gene3D G3DSA:1.10.8.50 168 236 1.1E-26 T 12-10-2018 N288_09365 6177de7e6cc9ee64f8c7494df1d97829 570 Gene3D G3DSA:2.30.310.10 1 167 3.0E-67 T 12-10-2018 N288_04435 e81ce12658126f991307a2dc972e58d4 647 SUPERFAMILY SSF82866 119 289 8.37E-31 T 12-10-2018 N288_04435 e81ce12658126f991307a2dc972e58d4 647 SUPERFAMILY SSF82866 409 633 2.75E-22 T 12-10-2018 N288_04435 e81ce12658126f991307a2dc972e58d4 647 Gene3D G3DSA:1.20.1640.10 448 646 1.1E-8 T 12-10-2018 N288_04435 e81ce12658126f991307a2dc972e58d4 647 Pfam PF03176 MMPL family 4 288 1.7E-22 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 N288_04435 e81ce12658126f991307a2dc972e58d4 647 Pfam PF03176 MMPL family 352 629 3.1E-27 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 N288_04435 e81ce12658126f991307a2dc972e58d4 647 Gene3D G3DSA:1.20.1640.10 106 297 1.8E-14 T 12-10-2018 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 642 56.581 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 Gene3D G3DSA:3.40.50.140 1 134 7.0E-54 T 12-10-2018 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 279 302 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 Gene3D G3DSA:1.10.460.10 135 550 3.2E-170 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 Gene3D G3DSA:2.70.20.10 184 457 3.2E-170 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 SMART SM00436 104 192 1.3E-52 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 SUPERFAMILY SSF57783 576 613 2.47E-14 T 12-10-2018 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 473 487 4.4E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 4.4E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 4.4E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 370 386 4.4E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 293 302 4.4E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 Pfam PF01751 Toprim domain 5 113 6.4E-29 T 12-10-2018 IPR006171 TOPRIM domain N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 Pfam PF01131 DNA topoisomerase 128 547 1.8E-138 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 611 9.8E-271 T 12-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 SMART SM00493 3 103 8.3E-33 T 12-10-2018 IPR006171 TOPRIM domain N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 Gene3D G3DSA:3.30.65.10 559 618 2.2E-15 T 12-10-2018 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 Gene3D G3DSA:1.10.290.10 250 385 3.2E-170 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 616 655 3.7E-12 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 576 612 2.6E-16 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 658 687 0.19 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 SUPERFAMILY SSF56712 4 589 9.68E-202 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain N288_09650 6b261a4e4783bcda9ccb98aeb2b47fd5 691 SMART SM00437 242 510 3.0E-130 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 N288_18900 de8aba3494bf01e192e5e3d522051884 333 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 25 327 6.6E-148 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 N288_18900 de8aba3494bf01e192e5e3d522051884 333 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 332 7.0E-35 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 N288_18900 de8aba3494bf01e192e5e3d522051884 333 Gene3D G3DSA:3.40.50.300 21 182 1.4E-40 T 12-10-2018 N288_18900 de8aba3494bf01e192e5e3d522051884 333 SUPERFAMILY SSF52540 21 254 9.93E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_18900 de8aba3494bf01e192e5e3d522051884 333 Gene3D G3DSA:1.10.8.60 183 257 2.6E-30 T 12-10-2018 N288_18900 de8aba3494bf01e192e5e3d522051884 333 SUPERFAMILY SSF46785 257 331 2.63E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_18900 de8aba3494bf01e192e5e3d522051884 333 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 4.8E-34 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 N288_18900 de8aba3494bf01e192e5e3d522051884 333 Gene3D G3DSA:1.10.10.10 258 333 1.1E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_18900 de8aba3494bf01e192e5e3d522051884 333 SMART SM00382 52 183 3.9E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_18900 de8aba3494bf01e192e5e3d522051884 333 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 333 173.411 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 N288_18900 de8aba3494bf01e192e5e3d522051884 333 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 5 236 1.1E-117 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 N288_18690 6b21170365947976056de8ec36ea7f6a 158 Gene3D G3DSA:3.10.50.30 79 158 1.4E-27 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 N288_18690 6b21170365947976056de8ec36ea7f6a 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 158 33.037 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 N288_18690 6b21170365947976056de8ec36ea7f6a 158 SUPERFAMILY SSF46557 6 80 9.42E-28 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 N288_18690 6b21170365947976056de8ec36ea7f6a 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 158 3.7E-29 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 N288_18690 6b21170365947976056de8ec36ea7f6a 158 Gene3D G3DSA:1.10.287.180 5 78 1.9E-32 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 N288_18690 6b21170365947976056de8ec36ea7f6a 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 158 7.2E-61 T 12-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 N288_18690 6b21170365947976056de8ec36ea7f6a 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 N288_18690 6b21170365947976056de8ec36ea7f6a 158 Pfam PF03449 Transcription elongation factor, N-terminal 8 77 1.7E-32 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 N288_18690 6b21170365947976056de8ec36ea7f6a 158 PIRSF PIRSF006092 1 158 2.9E-53 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 N288_18690 6b21170365947976056de8ec36ea7f6a 158 SUPERFAMILY SSF54534 84 157 2.49E-22 T 12-10-2018 N288_05285 2c5b2427327ffdd3174605ba9a08504d 191 Gene3D G3DSA:1.10.1740.10 13 104 5.5E-21 T 12-10-2018 N288_05285 2c5b2427327ffdd3174605ba9a08504d 191 Pfam PF04542 Sigma-70 region 2 31 91 6.1E-11 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_05285 2c5b2427327ffdd3174605ba9a08504d 191 Gene3D G3DSA:1.10.10.10 105 187 2.2E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_05285 2c5b2427327ffdd3174605ba9a08504d 191 SUPERFAMILY SSF88946 21 107 7.46E-18 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_05285 2c5b2427327ffdd3174605ba9a08504d 191 SUPERFAMILY SSF88659 126 183 8.07E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_05285 2c5b2427327ffdd3174605ba9a08504d 191 Pfam PF08281 Sigma-70, region 4 125 177 3.8E-16 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_05285 2c5b2427327ffdd3174605ba9a08504d 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 177 1.6E-30 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_13695 e3b33992863c845a62fdb15f4eb6671c 366 Pfam PF01636 Phosphotransferase enzyme family 77 296 1.6E-5 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase N288_13695 e3b33992863c845a62fdb15f4eb6671c 366 Gene3D G3DSA:3.30.200.20 10 121 2.5E-28 T 12-10-2018 N288_13695 e3b33992863c845a62fdb15f4eb6671c 366 TIGRFAM TIGR02906 spore_CotS: spore coat protein, CotS family 42 356 4.7E-92 T 12-10-2018 IPR014255 Spore coat protein CotS N288_13695 e3b33992863c845a62fdb15f4eb6671c 366 Gene3D G3DSA:3.90.1200.10 127 356 1.0E-58 T 12-10-2018 N288_13695 e3b33992863c845a62fdb15f4eb6671c 366 SUPERFAMILY SSF56112 21 355 5.95E-32 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_07025 7fae26a364ba71c943e27421cea35b57 244 SUPERFAMILY SSF56281 1 243 4.06E-54 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_07025 7fae26a364ba71c943e27421cea35b57 244 Gene3D G3DSA:3.60.15.10 1 243 1.4E-82 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_07025 7fae26a364ba71c943e27421cea35b57 244 Pfam PF12706 Beta-lactamase superfamily domain 30 211 1.3E-24 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_07025 7fae26a364ba71c943e27421cea35b57 244 SMART SM00849 18 211 8.3E-10 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_12095 b61cd304c7b385b444d8ad36f8d0367c 172 Pfam PF01966 HD domain 25 137 2.0E-14 T 12-10-2018 IPR006674 HD domain N288_12095 b61cd304c7b385b444d8ad36f8d0367c 172 SMART SM00471 19 148 1.8E-6 T 12-10-2018 IPR003607 HD/PDEase domain N288_12095 b61cd304c7b385b444d8ad36f8d0367c 172 SUPERFAMILY SSF109604 14 137 7.25E-22 T 12-10-2018 N288_12095 b61cd304c7b385b444d8ad36f8d0367c 172 TIGRFAM TIGR00277 HDIG: HDIG domain 22 91 6.0E-8 T 12-10-2018 IPR006675 HDIG domain N288_12095 b61cd304c7b385b444d8ad36f8d0367c 172 Gene3D G3DSA:1.10.3210.10 4 168 8.6E-18 T 12-10-2018 N288_21365 a0339e17588fb875b3a06931b3db377c 986 Gene3D G3DSA:3.40.50.740 322 783 8.7E-168 T 12-10-2018 N288_21365 a0339e17588fb875b3a06931b3db377c 986 SMART SM00929 86 127 1.8E-9 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_21365 a0339e17588fb875b3a06931b3db377c 986 Pfam PF00384 Molybdopterin oxidoreductase 317 740 4.6E-74 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_21365 a0339e17588fb875b3a06931b3db377c 986 SUPERFAMILY SSF54292 7 76 6.33E-11 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 N288_21365 a0339e17588fb875b3a06931b3db377c 986 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 265 931 1.5E-252 T 12-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 N288_21365 a0339e17588fb875b3a06931b3db377c 986 Pfam PF12838 4Fe-4S dicluster domain 149 207 7.3E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain N288_21365 a0339e17588fb875b3a06931b3db377c 986 Pfam PF01568 Molydopterin dinucleotide binding domain 824 930 9.6E-20 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 N288_21365 a0339e17588fb875b3a06931b3db377c 986 SUPERFAMILY SSF50692 789 935 2.26E-32 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily N288_21365 a0339e17588fb875b3a06931b3db377c 986 Gene3D G3DSA:3.10.20.740 5 127 9.0E-25 T 12-10-2018 N288_21365 a0339e17588fb875b3a06931b3db377c 986 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 260 314 1.5E-18 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_21365 a0339e17588fb875b3a06931b3db377c 986 SUPERFAMILY SSF53706 254 777 3.01E-195 T 12-10-2018 N288_21365 a0339e17588fb875b3a06931b3db377c 986 SUPERFAMILY SSF54862 79 213 1.13E-28 T 12-10-2018 N288_21365 a0339e17588fb875b3a06931b3db377c 986 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 5 77 9.5E-10 T 12-10-2018 N288_21365 a0339e17588fb875b3a06931b3db377c 986 SMART SM00926 260 314 6.6E-18 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_21365 a0339e17588fb875b3a06931b3db377c 986 Gene3D G3DSA:2.20.25.90 260 315 1.0E-19 T 12-10-2018 N288_21365 a0339e17588fb875b3a06931b3db377c 986 Gene3D G3DSA:3.40.228.10 395 594 8.7E-168 T 12-10-2018 N288_21365 a0339e17588fb875b3a06931b3db377c 986 PIRSF PIRSF036643 2 967 0.0 T 12-10-2018 N288_21365 a0339e17588fb875b3a06931b3db377c 986 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site N288_21365 a0339e17588fb875b3a06931b3db377c 986 Gene3D G3DSA:2.40.40.20 816 942 3.4E-27 T 12-10-2018 N288_21365 a0339e17588fb875b3a06931b3db377c 986 Gene3D G3DSA:3.30.70.20 129 211 7.6E-21 T 12-10-2018 N288_21365 a0339e17588fb875b3a06931b3db377c 986 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 90 125 6.7E-9 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_10665 2208f97dfea167bece0b042f851a1bab 267 Gene3D G3DSA:3.40.390.10 85 262 2.6E-14 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 N288_10665 2208f97dfea167bece0b042f851a1bab 267 SUPERFAMILY SSF55486 98 266 2.28E-20 T 12-10-2018 N288_10665 2208f97dfea167bece0b042f851a1bab 267 Pfam PF13688 Metallo-peptidase family M12 98 249 1.4E-29 T 12-10-2018 N288_11555 a23bdb1afb912affef86f4a84a76d5f0 368 Gene3D G3DSA:2.60.120.10 59 155 4.9E-8 T 12-10-2018 IPR014710 RmlC-like jelly roll fold N288_11555 a23bdb1afb912affef86f4a84a76d5f0 368 Pfam PF04209 homogentisate 1,2-dioxygenase 89 365 4.8E-20 T 12-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 N288_11555 a23bdb1afb912affef86f4a84a76d5f0 368 Gene3D G3DSA:2.60.120.10 251 344 1.9E-6 T 12-10-2018 IPR014710 RmlC-like jelly roll fold N288_11555 a23bdb1afb912affef86f4a84a76d5f0 368 SUPERFAMILY SSF51182 6 365 7.83E-89 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily N288_10130 a53f20e5f3882466a4c2a2a43940ecbe 413 SUPERFAMILY SSF53218 1 206 1.83E-41 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily N288_10130 a53f20e5f3882466a4c2a2a43940ecbe 413 Gene3D G3DSA:3.40.980.10 1 168 2.9E-52 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily N288_10130 a53f20e5f3882466a4c2a2a43940ecbe 413 PIRSF PIRSF006728 1 413 9.3E-161 T 12-10-2018 IPR008135 Competence-induced protein CinA N288_10130 a53f20e5f3882466a4c2a2a43940ecbe 413 Pfam PF00994 Probable molybdopterin binding domain 4 168 1.2E-36 T 12-10-2018 IPR001453 MoaB/Mog domain N288_10130 a53f20e5f3882466a4c2a2a43940ecbe 413 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 162 4.8E-33 T 12-10-2018 IPR001453 MoaB/Mog domain N288_10130 a53f20e5f3882466a4c2a2a43940ecbe 413 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 413 166.031 T 12-10-2018 IPR008135 Competence-induced protein CinA N288_10130 a53f20e5f3882466a4c2a2a43940ecbe 413 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 411 8.0E-155 T 12-10-2018 IPR008135 Competence-induced protein CinA N288_10130 a53f20e5f3882466a4c2a2a43940ecbe 413 SUPERFAMILY SSF142433 250 411 3.66E-49 T 12-10-2018 IPR036653 CinA-like, C-terminal N288_10130 a53f20e5f3882466a4c2a2a43940ecbe 413 Pfam PF02464 Competence-damaged protein 257 409 2.6E-51 T 12-10-2018 IPR008136 CinA, C-terminal N288_10130 a53f20e5f3882466a4c2a2a43940ecbe 413 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 263 409 1.1E-42 T 12-10-2018 IPR008136 CinA, C-terminal N288_10130 a53f20e5f3882466a4c2a2a43940ecbe 413 SMART SM00852 4 170 2.2E-46 T 12-10-2018 IPR001453 MoaB/Mog domain N288_10130 a53f20e5f3882466a4c2a2a43940ecbe 413 Gene3D G3DSA:3.90.950.20 252 413 6.6E-52 T 12-10-2018 IPR036653 CinA-like, C-terminal N288_00800 bb28ccb65ae5c5272482f368f8426afd 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 100 1.3E-30 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00800 bb28ccb65ae5c5272482f368f8426afd 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 100 1.0E-40 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00800 bb28ccb65ae5c5272482f368f8426afd 103 SMART SM00739 2 29 1.3E-6 T 12-10-2018 IPR005824 KOW N288_00800 bb28ccb65ae5c5272482f368f8426afd 103 Pfam PF00467 KOW motif 5 36 2.0E-8 T 12-10-2018 IPR005824 KOW N288_00800 bb28ccb65ae5c5272482f368f8426afd 103 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 12-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00800 bb28ccb65ae5c5272482f368f8426afd 103 SUPERFAMILY SSF50104 1 100 6.52E-38 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily N288_00800 bb28ccb65ae5c5272482f368f8426afd 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 95 22.969 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00800 bb28ccb65ae5c5272482f368f8426afd 103 Gene3D G3DSA:2.30.30.30 1 100 3.1E-41 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 N288_03530 11b30be2562f3a3a3b578451535253d0 410 Pfam PF02073 Thermophilic metalloprotease (M29) 6 408 1.1E-181 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_03530 11b30be2562f3a3a3b578451535253d0 410 SUPERFAMILY SSF144052 6 409 6.02E-154 T 12-10-2018 N288_03530 11b30be2562f3a3a3b578451535253d0 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 363 385 6.8E-76 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_03530 11b30be2562f3a3a3b578451535253d0 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 389 408 6.8E-76 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_03530 11b30be2562f3a3a3b578451535253d0 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 15 32 6.8E-76 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_03530 11b30be2562f3a3a3b578451535253d0 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 156 178 6.8E-76 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_03530 11b30be2562f3a3a3b578451535253d0 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 80 99 6.8E-76 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_03530 11b30be2562f3a3a3b578451535253d0 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 324 345 6.8E-76 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_03530 11b30be2562f3a3a3b578451535253d0 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 245 264 6.8E-76 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_03530 11b30be2562f3a3a3b578451535253d0 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 301 321 6.8E-76 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_03530 11b30be2562f3a3a3b578451535253d0 410 Gene3D G3DSA:3.40.1830.10 1 180 1.9E-69 T 12-10-2018 IPR035097 Peptidase M29, N-terminal N288_24425 b29308045d6cb12b614e5b17bcb47094 150 Pfam PF03713 Domain of unknown function (DUF305) 93 142 9.3E-10 T 12-10-2018 IPR005183 Domain of unknown function DUF305 N288_24425 b29308045d6cb12b614e5b17bcb47094 150 Gene3D G3DSA:1.20.1260.10 83 148 2.0E-10 T 12-10-2018 IPR012347 Ferritin-like N288_24320 c22c65fcbb7c2786527cdc31546dceed 127 Gene3D G3DSA:3.10.180.10 1 127 3.7E-28 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_24320 c22c65fcbb7c2786527cdc31546dceed 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 4.3E-15 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_24320 c22c65fcbb7c2786527cdc31546dceed 127 SUPERFAMILY SSF54593 4 127 5.1E-27 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_17955 ce5f13c072153559b1f26806c8c52ea2 849 PRINTS PR01183 Ribonucleotide reductase large chain signature 636 663 1.1E-36 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_17955 ce5f13c072153559b1f26806c8c52ea2 849 PRINTS PR01183 Ribonucleotide reductase large chain signature 571 594 1.1E-36 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_17955 ce5f13c072153559b1f26806c8c52ea2 849 PRINTS PR01183 Ribonucleotide reductase large chain signature 260 279 1.1E-36 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_17955 ce5f13c072153559b1f26806c8c52ea2 849 PRINTS PR01183 Ribonucleotide reductase large chain signature 505 528 1.1E-36 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_17955 ce5f13c072153559b1f26806c8c52ea2 849 PRINTS PR01183 Ribonucleotide reductase large chain signature 543 565 1.1E-36 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_17955 ce5f13c072153559b1f26806c8c52ea2 849 SUPERFAMILY SSF51998 125 827 7.94E-145 T 12-10-2018 N288_17955 ce5f13c072153559b1f26806c8c52ea2 849 Gene3D G3DSA:3.20.70.20 114 312 9.5E-43 T 12-10-2018 N288_17955 ce5f13c072153559b1f26806c8c52ea2 849 Pfam PF02867 Ribonucleotide reductase, barrel domain 185 764 1.7E-123 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_17955 ce5f13c072153559b1f26806c8c52ea2 849 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 127 774 1.2E-179 T 12-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 N288_17955 ce5f13c072153559b1f26806c8c52ea2 849 Gene3D G3DSA:3.20.70.20 354 779 9.1E-120 T 12-10-2018 N288_17955 ce5f13c072153559b1f26806c8c52ea2 849 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 128 178 4.9E-8 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_17620 2cc9d7cb18f65e4772c474e1ac1782a6 308 Gene3D G3DSA:3.60.15.10 1 304 2.2E-103 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_17620 2cc9d7cb18f65e4772c474e1ac1782a6 308 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 3 304 4.3E-112 T 12-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 N288_17620 2cc9d7cb18f65e4772c474e1ac1782a6 308 Hamap MF_01818 Ribonuclease BN [rbn]. 1 304 40.443 T 12-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 N288_17620 2cc9d7cb18f65e4772c474e1ac1782a6 308 Pfam PF00753 Metallo-beta-lactamase superfamily 27 120 4.8E-10 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_17620 2cc9d7cb18f65e4772c474e1ac1782a6 308 SUPERFAMILY SSF56281 3 304 1.35E-82 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_17620 2cc9d7cb18f65e4772c474e1ac1782a6 308 Pfam PF12706 Beta-lactamase superfamily domain 193 270 1.5E-7 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_25070 6ce530e714744687072049cd76fd0d25 182 Pfam PF09335 SNARE associated Golgi protein 33 146 1.8E-20 T 12-10-2018 IPR032816 SNARE associated Golgi protein N288_06905 a91af7848eaf71be7d7370e464c34ca7 476 PRINTS PR01046 Prolyl-tRNA synthetase signature 138 146 1.6E-9 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 N288_06905 a91af7848eaf71be7d7370e464c34ca7 476 PRINTS PR01046 Prolyl-tRNA synthetase signature 67 85 1.6E-9 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 N288_06905 a91af7848eaf71be7d7370e464c34ca7 476 PRINTS PR01046 Prolyl-tRNA synthetase signature 108 119 1.6E-9 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 N288_06905 a91af7848eaf71be7d7370e464c34ca7 476 PRINTS PR01046 Prolyl-tRNA synthetase signature 147 158 1.6E-9 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 N288_06905 a91af7848eaf71be7d7370e464c34ca7 476 Gene3D G3DSA:3.30.110.30 403 476 2.3E-25 T 12-10-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 N288_06905 a91af7848eaf71be7d7370e464c34ca7 476 Gene3D G3DSA:3.30.930.10 5 284 8.0E-106 T 12-10-2018 N288_06905 a91af7848eaf71be7d7370e464c34ca7 476 Gene3D G3DSA:3.40.50.800 285 400 2.0E-32 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily N288_06905 a91af7848eaf71be7d7370e464c34ca7 476 SUPERFAMILY SSF52954 280 400 1.55E-31 T 12-10-2018 N288_06905 a91af7848eaf71be7d7370e464c34ca7 476 SUPERFAMILY SSF55681 13 277 1.44E-79 T 12-10-2018 N288_06905 a91af7848eaf71be7d7370e464c34ca7 476 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 12 476 6.0E-183 T 12-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 N288_06905 a91af7848eaf71be7d7370e464c34ca7 476 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 104 272 2.3E-18 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_06905 a91af7848eaf71be7d7370e464c34ca7 476 Hamap MF_01571 Proline--tRNA ligase [proS]. 9 476 44.124 T 12-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 N288_06905 a91af7848eaf71be7d7370e464c34ca7 476 Pfam PF09180 Prolyl-tRNA synthetase, C-terminal 411 476 1.6E-25 T 12-10-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 N288_06905 a91af7848eaf71be7d7370e464c34ca7 476 Pfam PF03129 Anticodon binding domain 291 377 4.5E-17 T 12-10-2018 IPR004154 Anticodon-binding N288_06905 a91af7848eaf71be7d7370e464c34ca7 476 SUPERFAMILY SSF64586 407 476 3.92E-23 T 12-10-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 N288_06905 a91af7848eaf71be7d7370e464c34ca7 476 SMART SM00946 409 476 1.9E-33 T 12-10-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 Pfam PF03144 Elongation factor Tu domain 2 322 389 5.1E-16 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 Gene3D G3DSA:3.30.70.240 602 672 2.3E-93 T 12-10-2018 N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 Gene3D G3DSA:3.40.50.300 1 291 2.2E-115 T 12-10-2018 N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 SUPERFAMILY SSF54980 402 479 3.09E-25 T 12-10-2018 IPR035647 EF-G domain III/V-like N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 Pfam PF00679 Elongation factor G C-terminus 598 684 1.5E-31 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 Gene3D G3DSA:3.30.230.10 482 685 2.3E-93 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 SUPERFAMILY SSF52540 6 280 5.66E-111 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 Gene3D G3DSA:3.30.70.870 404 481 9.9E-33 T 12-10-2018 N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 2.2E-70 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 690 0.0 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 Pfam PF03764 Elongation factor G, domain IV 477 595 1.9E-46 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 SUPERFAMILY SSF50447 263 402 7.07E-37 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 SMART SM00838 598 685 2.6E-55 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 2.9E-44 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 SUPERFAMILY SSF54980 598 688 7.19E-30 T 12-10-2018 IPR035647 EF-G domain III/V-like N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 Pfam PF14492 Elongation Factor G, domain II 402 475 3.3E-35 T 12-10-2018 N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 Gene3D G3DSA:2.40.30.10 292 403 1.6E-47 T 12-10-2018 N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 SMART SM00889 478 596 2.2E-73 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 PRINTS PR00315 GTP-binding elongation factor signature 78 88 5.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 PRINTS PR00315 GTP-binding elongation factor signature 94 105 5.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 PRINTS PR00315 GTP-binding elongation factor signature 12 25 5.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 PRINTS PR00315 GTP-binding elongation factor signature 130 139 5.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 SUPERFAMILY SSF54211 477 597 3.03E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_00730 a3f4f716693a8fe0d8574ac06f53e405 692 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 113.885 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 N288_14955 51eae1a633e9b9efdc1867ae18e97440 488 Gene3D G3DSA:3.40.605.10 13 258 1.6E-149 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 N288_14955 51eae1a633e9b9efdc1867ae18e97440 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 N288_14955 51eae1a633e9b9efdc1867ae18e97440 488 SUPERFAMILY SSF53720 6 480 6.68E-144 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 N288_14955 51eae1a633e9b9efdc1867ae18e97440 488 Pfam PF00171 Aldehyde dehydrogenase family 16 477 3.0E-151 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 N288_14955 51eae1a633e9b9efdc1867ae18e97440 488 Gene3D G3DSA:3.40.309.10 259 439 1.6E-149 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 N288_08565 092c46e8db5d6c58fcbc5a5668a3a49f 384 Gene3D G3DSA:3.90.1150.10 29 375 3.3E-127 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_08565 092c46e8db5d6c58fcbc5a5668a3a49f 384 Gene3D G3DSA:3.40.640.10 58 278 3.3E-127 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_08565 092c46e8db5d6c58fcbc5a5668a3a49f 384 Pfam PF00155 Aminotransferase class I and II 28 375 1.1E-62 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 N288_08565 092c46e8db5d6c58fcbc5a5668a3a49f 384 SUPERFAMILY SSF53383 5 381 2.29E-111 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_08565 092c46e8db5d6c58fcbc5a5668a3a49f 384 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 228 241 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 N288_19730 0fafb3ef8313a961b1fad19d70308643 462 TIGRFAM TIGR00838 argH: argininosuccinate lyase 4 456 5.8E-206 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 N288_19730 0fafb3ef8313a961b1fad19d70308643 462 SUPERFAMILY SSF48557 4 456 1.73E-150 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 N288_19730 0fafb3ef8313a961b1fad19d70308643 462 Gene3D G3DSA:1.10.275.10 26 230 1.7E-194 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal N288_19730 0fafb3ef8313a961b1fad19d70308643 462 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 7.1E-71 T 12-10-2018 N288_19730 0fafb3ef8313a961b1fad19d70308643 462 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 7.1E-71 T 12-10-2018 N288_19730 0fafb3ef8313a961b1fad19d70308643 462 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 7.1E-71 T 12-10-2018 N288_19730 0fafb3ef8313a961b1fad19d70308643 462 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 7.1E-71 T 12-10-2018 N288_19730 0fafb3ef8313a961b1fad19d70308643 462 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 7.1E-71 T 12-10-2018 N288_19730 0fafb3ef8313a961b1fad19d70308643 462 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 7.1E-71 T 12-10-2018 N288_19730 0fafb3ef8313a961b1fad19d70308643 462 Hamap MF_00006 Argininosuccinate lyase [argH]. 3 454 44.643 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 N288_19730 0fafb3ef8313a961b1fad19d70308643 462 Gene3D G3DSA:1.10.40.30 361 433 1.7E-194 T 12-10-2018 N288_19730 0fafb3ef8313a961b1fad19d70308643 462 Gene3D G3DSA:1.20.200.10 120 448 1.7E-194 T 12-10-2018 N288_19730 0fafb3ef8313a961b1fad19d70308643 462 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 1.3E-30 T 12-10-2018 IPR000362 Fumarate lyase family N288_19730 0fafb3ef8313a961b1fad19d70308643 462 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 1.3E-30 T 12-10-2018 IPR000362 Fumarate lyase family N288_19730 0fafb3ef8313a961b1fad19d70308643 462 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 1.3E-30 T 12-10-2018 IPR000362 Fumarate lyase family N288_19730 0fafb3ef8313a961b1fad19d70308643 462 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 1.3E-30 T 12-10-2018 IPR000362 Fumarate lyase family N288_19730 0fafb3ef8313a961b1fad19d70308643 462 Pfam PF00206 Lyase 7 301 1.5E-76 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal N288_19730 0fafb3ef8313a961b1fad19d70308643 462 Pfam PF14698 Argininosuccinate lyase C-terminal 364 432 9.9E-24 T 12-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 N288_19730 0fafb3ef8313a961b1fad19d70308643 462 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 N288_20220 972a6bd9cb1f9d308ae29f9caf4cdd76 399 PIRSF PIRSF000497 1 398 9.2E-180 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 N288_20220 972a6bd9cb1f9d308ae29f9caf4cdd76 399 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 247 386 1.2E-70 T 12-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 N288_20220 972a6bd9cb1f9d308ae29f9caf4cdd76 399 Gene3D G3DSA:3.30.300.10 7 247 1.6E-182 T 12-10-2018 N288_20220 972a6bd9cb1f9d308ae29f9caf4cdd76 399 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 397 59.778 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 N288_20220 972a6bd9cb1f9d308ae29f9caf4cdd76 399 SUPERFAMILY SSF55973 5 111 1.33E-46 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 N288_20220 972a6bd9cb1f9d308ae29f9caf4cdd76 399 SUPERFAMILY SSF55973 247 396 8.63E-71 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 N288_20220 972a6bd9cb1f9d308ae29f9caf4cdd76 399 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 395 1.5E-187 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 N288_20220 972a6bd9cb1f9d308ae29f9caf4cdd76 399 SUPERFAMILY SSF55973 125 246 1.02E-53 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 N288_20220 972a6bd9cb1f9d308ae29f9caf4cdd76 399 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 129 139 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 N288_20220 972a6bd9cb1f9d308ae29f9caf4cdd76 399 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 103 3.6E-43 T 12-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 N288_20220 972a6bd9cb1f9d308ae29f9caf4cdd76 399 Pfam PF02772 S-adenosylmethionine synthetase, central domain 128 245 1.8E-50 T 12-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 N288_20220 972a6bd9cb1f9d308ae29f9caf4cdd76 399 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 273 281 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 N288_20220 972a6bd9cb1f9d308ae29f9caf4cdd76 399 Gene3D G3DSA:3.30.300.10 13 284 1.6E-182 T 12-10-2018 N288_20220 972a6bd9cb1f9d308ae29f9caf4cdd76 399 Gene3D G3DSA:3.30.300.10 104 389 1.6E-182 T 12-10-2018 N288_19815 a2362d4bae8e04efd335b934cbf12606 401 Pfam PF02926 THUMP domain 40 162 7.5E-22 T 12-10-2018 IPR004114 THUMP domain GO:0003723 N288_19815 a2362d4bae8e04efd335b934cbf12606 401 SUPERFAMILY SSF52402 175 386 4.19E-50 T 12-10-2018 N288_19815 a2362d4bae8e04efd335b934cbf12606 401 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 401 159.592 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 N288_19815 a2362d4bae8e04efd335b934cbf12606 401 SUPERFAMILY SSF143437 3 173 1.92E-53 T 12-10-2018 N288_19815 a2362d4bae8e04efd335b934cbf12606 401 SMART SM00981 74 165 2.0E-23 T 12-10-2018 IPR004114 THUMP domain GO:0003723 N288_19815 a2362d4bae8e04efd335b934cbf12606 401 Gene3D G3DSA:3.40.50.620 175 399 4.1E-72 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_19815 a2362d4bae8e04efd335b934cbf12606 401 Gene3D G3DSA:3.30.2130.30 1 174 7.9E-61 T 12-10-2018 N288_19815 a2362d4bae8e04efd335b934cbf12606 401 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 370 1.6E-64 T 12-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 N288_19815 a2362d4bae8e04efd335b934cbf12606 401 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 6 372 6.4E-130 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 N288_08390 78df3db1033e44c18645efa255156b92 390 Gene3D G3DSA:3.90.1150.10 26 384 5.7E-117 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_08390 78df3db1033e44c18645efa255156b92 390 SUPERFAMILY SSF53383 6 387 4.35E-105 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_08390 78df3db1033e44c18645efa255156b92 390 Gene3D G3DSA:3.40.640.10 45 286 5.7E-117 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_08390 78df3db1033e44c18645efa255156b92 390 Pfam PF00155 Aminotransferase class I and II 34 384 1.7E-67 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 N288_16860 deaea46aa6e76fa0abeb5cd9530f16c0 157 SUPERFAMILY SSF54403 94 156 1.87E-18 T 12-10-2018 N288_16860 deaea46aa6e76fa0abeb5cd9530f16c0 157 Gene3D G3DSA:3.10.450.40 24 93 1.5E-19 T 12-10-2018 N288_16860 deaea46aa6e76fa0abeb5cd9530f16c0 157 SUPERFAMILY SSF54403 33 94 4.25E-17 T 12-10-2018 N288_16860 deaea46aa6e76fa0abeb5cd9530f16c0 157 Gene3D G3DSA:3.10.450.40 94 155 7.1E-23 T 12-10-2018 N288_09470 8a2d51819b07eb3cb9eee7376d7261d9 560 Pfam PF13684 Dihydroxyacetone kinase family 240 560 1.6E-127 T 12-10-2018 IPR033470 Uncharacterised protein, DhaK domain N288_09470 8a2d51819b07eb3cb9eee7376d7261d9 560 SUPERFAMILY SSF101473 3 200 5.49E-46 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 N288_09470 8a2d51819b07eb3cb9eee7376d7261d9 560 Gene3D G3DSA:1.25.40.340 4 179 1.0E-11 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 N288_09470 8a2d51819b07eb3cb9eee7376d7261d9 560 Pfam PF02734 DAK2 domain 36 200 1.1E-42 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 N288_09470 8a2d51819b07eb3cb9eee7376d7261d9 560 SMART SM01120 36 201 6.8E-73 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 N288_09470 8a2d51819b07eb3cb9eee7376d7261d9 560 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 11 560 3.2E-218 T 12-10-2018 IPR019986 DAK2 domain-containing protein YloV N288_09470 8a2d51819b07eb3cb9eee7376d7261d9 560 SMART SM01121 240 560 1.2E-185 T 12-10-2018 IPR033470 Uncharacterised protein, DhaK domain N288_16875 69564647fb426188e87398e2d8cabeff 934 Pfam PF13307 Helicase C-terminal domain 750 913 9.3E-37 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 N288_16875 69564647fb426188e87398e2d8cabeff 934 SMART SM00487 255 523 5.2E-8 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_16875 69564647fb426188e87398e2d8cabeff 934 SMART SM00491 767 901 1.4E-38 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 N288_16875 69564647fb426188e87398e2d8cabeff 934 Gene3D G3DSA:3.40.50.300 732 924 7.8E-41 T 12-10-2018 N288_16875 69564647fb426188e87398e2d8cabeff 934 Pfam PF00929 Exonuclease 6 162 1.4E-25 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III N288_16875 69564647fb426188e87398e2d8cabeff 934 Gene3D G3DSA:3.40.50.300 257 510 4.1E-41 T 12-10-2018 N288_16875 69564647fb426188e87398e2d8cabeff 934 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 168 4.5E-24 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_16875 69564647fb426188e87398e2d8cabeff 934 SUPERFAMILY SSF52540 270 895 1.45E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_16875 69564647fb426188e87398e2d8cabeff 934 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 4 932 4.1E-255 T 12-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 N288_16875 69564647fb426188e87398e2d8cabeff 934 SUPERFAMILY SSF53098 4 195 2.01E-50 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily N288_16875 69564647fb426188e87398e2d8cabeff 934 SMART SM00479 4 171 2.9E-41 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III N288_16875 69564647fb426188e87398e2d8cabeff 934 Gene3D G3DSA:3.30.420.10 1 168 3.6E-45 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 N288_16875 69564647fb426188e87398e2d8cabeff 934 Hamap MF_02206 3'-5' exonuclease DinG [dinG]. 1 933 27.793 T 12-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 N288_16875 69564647fb426188e87398e2d8cabeff 934 Pfam PF04851 Type III restriction enzyme, res subunit 257 470 7.5E-6 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 N288_06380 d54a90e0b8d7b40b79d2b1fc6a16970e 122 SUPERFAMILY SSF52821 13 101 1.11E-12 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_06380 d54a90e0b8d7b40b79d2b1fc6a16970e 122 Gene3D G3DSA:3.40.250.10 27 108 8.0E-10 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_24040 61b0ab61e655e890ad1662d83f0efdb3 284 SUPERFAMILY SSF55681 6 268 1.33E-67 T 12-10-2018 N288_24040 61b0ab61e655e890ad1662d83f0efdb3 284 Pfam PF03099 Biotin/lipoate A/B protein ligase family 77 184 3.7E-14 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 N288_24040 61b0ab61e655e890ad1662d83f0efdb3 284 Hamap MF_02119 Lipoyl-[GcvH]:protein N-lipoyltransferase [lipL]. 6 278 49.534 T 12-10-2018 IPR024897 Octanoyltransferase LipL GO:0009107|GO:0009249|GO:0016415 MetaCyc: PWY-6987 N288_24040 61b0ab61e655e890ad1662d83f0efdb3 284 Gene3D G3DSA:3.30.930.10 4 282 1.5E-76 T 12-10-2018 N288_19375 c62b95470ad832817f02ae43d7243656 426 SUPERFAMILY SSF55021 264 340 7.64E-13 T 12-10-2018 N288_19375 c62b95470ad832817f02ae43d7243656 426 ProSitePatterns PS00324 Aspartokinase signature. 21 29 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 N288_19375 c62b95470ad832817f02ae43d7243656 426 Gene3D G3DSA:3.40.1160.10 17 269 3.1E-90 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily N288_19375 c62b95470ad832817f02ae43d7243656 426 SUPERFAMILY SSF53633 20 259 1.1E-72 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily N288_19375 c62b95470ad832817f02ae43d7243656 426 Pfam PF13840 ACT domain 350 414 7.4E-15 T 12-10-2018 IPR027795 CASTOR, ACT domain N288_19375 c62b95470ad832817f02ae43d7243656 426 Gene3D G3DSA:3.30.70.260 270 418 1.8E-48 T 12-10-2018 N288_19375 c62b95470ad832817f02ae43d7243656 426 Gene3D G3DSA:3.30.70.260 276 353 1.8E-48 T 12-10-2018 N288_19375 c62b95470ad832817f02ae43d7243656 426 Pfam PF00696 Amino acid kinase family 19 245 2.7E-53 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 N288_19375 c62b95470ad832817f02ae43d7243656 426 SUPERFAMILY SSF55021 345 419 2.47E-22 T 12-10-2018 N288_19375 c62b95470ad832817f02ae43d7243656 426 PIRSF PIRSF000726 17 78 5.2E-21 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 N288_19375 c62b95470ad832817f02ae43d7243656 426 PIRSF PIRSF000726 72 425 7.2E-132 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 N288_19375 c62b95470ad832817f02ae43d7243656 426 Pfam PF01842 ACT domain 283 338 7.6E-7 T 12-10-2018 IPR002912 ACT domain N288_19375 c62b95470ad832817f02ae43d7243656 426 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 17 419 3.2E-146 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 N288_19375 c62b95470ad832817f02ae43d7243656 426 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 79 417 1.5E-119 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 N288_22935 1b4ca239f938a2c64b6bdfac58926cd1 498 Gene3D G3DSA:3.40.309.10 270 463 9.9E-164 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 N288_22935 1b4ca239f938a2c64b6bdfac58926cd1 498 Pfam PF00171 Aldehyde dehydrogenase family 34 494 9.7E-161 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 N288_22935 1b4ca239f938a2c64b6bdfac58926cd1 498 Gene3D G3DSA:3.40.605.10 25 492 9.9E-164 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 N288_22935 1b4ca239f938a2c64b6bdfac58926cd1 498 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 N288_22935 1b4ca239f938a2c64b6bdfac58926cd1 498 SUPERFAMILY SSF53720 16 498 3.4E-158 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 N288_14925 5133ff9e6a6e9163c5638a3197c0be05 526 Gene3D G3DSA:3.30.450.20 201 314 5.4E-27 T 12-10-2018 N288_14925 5133ff9e6a6e9163c5638a3197c0be05 526 SMART SM00387 419 526 3.4E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_14925 5133ff9e6a6e9163c5638a3197c0be05 526 Pfam PF00989 PAS fold 216 312 1.0E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 N288_14925 5133ff9e6a6e9163c5638a3197c0be05 526 Gene3D G3DSA:3.30.565.10 373 524 1.2E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_14925 5133ff9e6a6e9163c5638a3197c0be05 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 472 5.6E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_14925 5133ff9e6a6e9163c5638a3197c0be05 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 524 5.6E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_14925 5133ff9e6a6e9163c5638a3197c0be05 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 486 5.6E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_14925 5133ff9e6a6e9163c5638a3197c0be05 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 5.6E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_14925 5133ff9e6a6e9163c5638a3197c0be05 526 SUPERFAMILY SSF55785 218 308 4.82E-8 T 12-10-2018 IPR035965 PAS domain superfamily N288_14925 5133ff9e6a6e9163c5638a3197c0be05 526 Pfam PF17203 Single cache domain 3 38 168 3.1E-27 T 12-10-2018 IPR033463 Single cache domain 3 N288_14925 5133ff9e6a6e9163c5638a3197c0be05 526 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 422 524 1.2E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_14925 5133ff9e6a6e9163c5638a3197c0be05 526 SUPERFAMILY SSF103190 38 169 2.55E-39 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily N288_14925 5133ff9e6a6e9163c5638a3197c0be05 526 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 322 367 5.0E-9 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain N288_14925 5133ff9e6a6e9163c5638a3197c0be05 526 SUPERFAMILY SSF55874 395 524 1.44E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_14925 5133ff9e6a6e9163c5638a3197c0be05 526 Gene3D G3DSA:3.30.450.20 33 166 4.0E-45 T 12-10-2018 N288_14925 5133ff9e6a6e9163c5638a3197c0be05 526 SUPERFAMILY SSF55890 325 374 2.22E-10 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 N288_08665 c321efaba33d7b328cf507e764be4d53 338 SMART SM00849 40 244 3.8E-25 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_08665 c321efaba33d7b328cf507e764be4d53 338 Pfam PF00753 Metallo-beta-lactamase superfamily 44 244 4.5E-21 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_08665 c321efaba33d7b328cf507e764be4d53 338 SUPERFAMILY SSF56281 20 293 3.67E-48 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_08665 c321efaba33d7b328cf507e764be4d53 338 Gene3D G3DSA:3.60.15.10 23 296 9.6E-58 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_17460 a845aa733fb61ca433fcea2e16887140 297 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 297 58.203 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD N288_17460 a845aa733fb61ca433fcea2e16887140 297 SUPERFAMILY SSF47823 4 99 6.87E-19 T 12-10-2018 N288_17460 a845aa733fb61ca433fcea2e16887140 297 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 7 297 1.2E-123 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 N288_17460 a845aa733fb61ca433fcea2e16887140 297 Pfam PF00589 Phage integrase family 110 283 3.3E-54 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 N288_17460 a845aa733fb61ca433fcea2e16887140 297 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 89 4.9E-22 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 N288_17460 a845aa733fb61ca433fcea2e16887140 297 Gene3D G3DSA:1.10.150.130 2 98 4.9E-22 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal N288_17460 a845aa733fb61ca433fcea2e16887140 297 SUPERFAMILY SSF56349 106 295 1.09E-60 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 N288_17460 a845aa733fb61ca433fcea2e16887140 297 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 297 1.5E-102 T 12-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 N288_17460 a845aa733fb61ca433fcea2e16887140 297 Gene3D G3DSA:1.10.443.10 110 291 1.2E-69 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 N288_17460 a845aa733fb61ca433fcea2e16887140 297 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 1 297 61.105 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 N288_03355 3ce1491b04da1f1ea3339c2a57613701 441 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 346 431 3.1E-8 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain N288_03355 3ce1491b04da1f1ea3339c2a57613701 441 Pfam PF01943 Polysaccharide biosynthesis protein 4 295 6.9E-23 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 N288_25250 1e9288c34b9c9e94ad02d3c9695784eb 338 SUPERFAMILY SSF53474 1 325 6.42E-70 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_25250 1e9288c34b9c9e94ad02d3c9695784eb 338 Pfam PF00561 alpha/beta hydrolase fold 39 153 2.1E-13 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_25250 1e9288c34b9c9e94ad02d3c9695784eb 338 PIRSF PIRSF000443 1 334 1.6E-69 T 12-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 N288_25250 1e9288c34b9c9e94ad02d3c9695784eb 338 Gene3D G3DSA:3.40.50.1820 1 336 3.9E-88 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_11005 233ebd7b7446adb791cc320d5bc6c9b9 321 Pfam PF08443 RimK-like ATP-grasp domain 98 207 9.2E-7 T 12-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 N288_11005 233ebd7b7446adb791cc320d5bc6c9b9 321 SUPERFAMILY SSF56059 85 284 2.98E-20 T 12-10-2018 N288_11005 233ebd7b7446adb791cc320d5bc6c9b9 321 Gene3D G3DSA:3.30.470.20 85 293 8.7E-6 T 12-10-2018 N288_23400 07ebc288a4e1d760f438e4d43328c144 410 Pfam PF14285 Domain of unknown function (DUF4367) 92 194 2.3E-14 T 12-10-2018 IPR025377 Domain of unknown function DUF4367 N288_17840 46c4283f523b3c776f132b78a7966ec9 452 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_17840 46c4283f523b3c776f132b78a7966ec9 452 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 1.3E-81 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_17840 46c4283f523b3c776f132b78a7966ec9 452 Pfam PF02785 Biotin carboxylase C-terminal domain 337 443 1.2E-42 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 N288_17840 46c4283f523b3c776f132b78a7966ec9 452 SMART SM00878 337 443 2.4E-68 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 N288_17840 46c4283f523b3c776f132b78a7966ec9 452 Gene3D G3DSA:3.30.470.130 1 450 3.9E-199 T 12-10-2018 N288_17840 46c4283f523b3c776f132b78a7966ec9 452 SUPERFAMILY SSF52440 1 113 1.58E-50 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily N288_17840 46c4283f523b3c776f132b78a7966ec9 452 SUPERFAMILY SSF51246 332 443 1.41E-46 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 N288_17840 46c4283f523b3c776f132b78a7966ec9 452 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_17840 46c4283f523b3c776f132b78a7966ec9 452 SUPERFAMILY SSF56059 83 349 4.95E-73 T 12-10-2018 N288_17840 46c4283f523b3c776f132b78a7966ec9 452 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 449 3.6E-239 T 12-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 N288_17840 46c4283f523b3c776f132b78a7966ec9 452 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.6E-47 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 N288_04285 96ba534a008a902a49d3e9f2f40167d5 431 Pfam PF00171 Aldehyde dehydrogenase family 4 428 5.3E-98 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 N288_04285 96ba534a008a902a49d3e9f2f40167d5 431 PIRSF PIRSF036492 1 431 3.5E-180 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 N288_04285 96ba534a008a902a49d3e9f2f40167d5 431 Gene3D G3DSA:3.40.605.10 12 428 3.9E-174 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 N288_04285 96ba534a008a902a49d3e9f2f40167d5 431 Gene3D G3DSA:3.40.309.10 213 408 3.9E-174 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 N288_04285 96ba534a008a902a49d3e9f2f40167d5 431 SUPERFAMILY SSF53720 6 430 1.13E-127 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 N288_04285 96ba534a008a902a49d3e9f2f40167d5 431 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 237 248 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 N288_04285 96ba534a008a902a49d3e9f2f40167d5 431 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 209 216 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 N288_22125 541b9677e6c268ed53f5f8aebc6a2c56 211 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 12-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site N288_22125 541b9677e6c268ed53f5f8aebc6a2c56 211 Gene3D G3DSA:3.30.230.30 1 133 2.6E-51 T 12-10-2018 IPR036956 Impact, N-terminal domain superfamily N288_22125 541b9677e6c268ed53f5f8aebc6a2c56 211 SUPERFAMILY SSF54980 135 198 6.4E-10 T 12-10-2018 IPR035647 EF-G domain III/V-like N288_22125 541b9677e6c268ed53f5f8aebc6a2c56 211 Pfam PF01205 Uncharacterized protein family UPF0029 19 122 2.0E-32 T 12-10-2018 IPR001498 Impact, N-terminal N288_22125 541b9677e6c268ed53f5f8aebc6a2c56 211 SUPERFAMILY SSF54211 2 130 6.83E-44 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_22125 541b9677e6c268ed53f5f8aebc6a2c56 211 Pfam PF09186 Domain of unknown function (DUF1949) 140 195 1.5E-17 T 12-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal N288_22125 541b9677e6c268ed53f5f8aebc6a2c56 211 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 202 5.3E-76 T 12-10-2018 IPR015796 Impact family, bacterial/archaeal N288_21340 1c76414e4f42364dd2d11fd24b3a4ecb 214 SMART SM00479 6 177 1.3E-10 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III N288_21340 1c76414e4f42364dd2d11fd24b3a4ecb 214 Gene3D G3DSA:3.30.420.10 5 174 3.2E-27 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 N288_21340 1c76414e4f42364dd2d11fd24b3a4ecb 214 SUPERFAMILY SSF53098 8 172 1.81E-28 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily N288_21340 1c76414e4f42364dd2d11fd24b3a4ecb 214 Pfam PF00929 Exonuclease 10 167 3.2E-13 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III N288_11490 312674dc3829d3341c1079206a2e3a27 335 SUPERFAMILY SSF53822 48 303 2.08E-17 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_11490 312674dc3829d3341c1079206a2e3a27 335 Gene3D G3DSA:3.40.50.2300 154 324 4.8E-90 T 12-10-2018 N288_11490 312674dc3829d3341c1079206a2e3a27 335 Pfam PF04392 ABC transporter substrate binding protein 40 331 3.0E-91 T 12-10-2018 IPR007487 ABC transporter, substrate-binding protein N288_11490 312674dc3829d3341c1079206a2e3a27 335 Gene3D G3DSA:3.40.50.2300 57 305 4.8E-90 T 12-10-2018 N288_10100 cea085045476d2c07209786384cb8804 428 SUPERFAMILY SSF63411 13 219 1.55E-41 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 N288_10100 cea085045476d2c07209786384cb8804 428 SUPERFAMILY SSF63411 278 426 1.59E-18 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 N288_10100 cea085045476d2c07209786384cb8804 428 Gene3D G3DSA:3.30.830.10 238 427 1.0E-39 T 12-10-2018 N288_10100 cea085045476d2c07209786384cb8804 428 Pfam PF00675 Insulinase (Peptidase family M16) 63 175 1.4E-17 T 12-10-2018 IPR011765 Peptidase M16, N-terminal N288_10100 cea085045476d2c07209786384cb8804 428 Pfam PF05193 Peptidase M16 inactive domain 182 362 4.0E-17 T 12-10-2018 IPR007863 Peptidase M16, C-terminal N288_10100 cea085045476d2c07209786384cb8804 428 Gene3D G3DSA:3.30.830.10 7 237 4.4E-59 T 12-10-2018 N288_06470 d9f94d781455d5c2b8184930a82d1c5f 113 SUPERFAMILY SSF46955 2 86 1.32E-12 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily N288_06470 d9f94d781455d5c2b8184930a82d1c5f 113 SMART SM00422 1 47 0.0068 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_06470 d9f94d781455d5c2b8184930a82d1c5f 113 Pfam PF13411 MerR HTH family regulatory protein 2 45 1.0E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_06470 d9f94d781455d5c2b8184930a82d1c5f 113 Gene3D G3DSA:1.10.1660.10 1 108 6.3E-15 T 12-10-2018 N288_23325 3f6386c1d9c9de854e9f3dc197f4003a 606 Gene3D G3DSA:3.40.50.720 274 604 1.3E-119 T 12-10-2018 N288_23325 3f6386c1d9c9de854e9f3dc197f4003a 606 SUPERFAMILY SSF51735 276 540 8.43E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_23325 3f6386c1d9c9de854e9f3dc197f4003a 606 Pfam PF02719 Polysaccharide biosynthesis protein 279 560 8.7E-126 T 12-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain N288_23325 3f6386c1d9c9de854e9f3dc197f4003a 606 Pfam PF13727 CoA-binding domain 72 233 9.2E-15 T 12-10-2018 N288_23325 3f6386c1d9c9de854e9f3dc197f4003a 606 Gene3D G3DSA:3.40.50.720 134 260 3.5E-35 T 12-10-2018 N288_23325 3f6386c1d9c9de854e9f3dc197f4003a 606 SUPERFAMILY SSF51735 138 266 3.58E-15 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_11300 490f1c5a1c411c01bdccfa13196c42fd 291 Pfam PF07848 PaaX-like protein 3 71 1.1E-31 T 12-10-2018 IPR012906 PaaX-like, N-terminal N288_11300 490f1c5a1c411c01bdccfa13196c42fd 291 SUPERFAMILY SSF46785 14 85 3.59E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_11300 490f1c5a1c411c01bdccfa13196c42fd 291 PIRSF PIRSF020623 1 289 7.0E-103 T 12-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 N288_11300 490f1c5a1c411c01bdccfa13196c42fd 291 Gene3D G3DSA:1.10.10.10 1 83 7.9E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_11300 490f1c5a1c411c01bdccfa13196c42fd 291 Pfam PF08223 PaaX-like protein C-terminal domain 167 265 6.2E-32 T 12-10-2018 IPR013225 PaaX-like, C-terminal N288_11300 490f1c5a1c411c01bdccfa13196c42fd 291 TIGRFAM TIGR02277 PaaX_trns_reg: phenylacetic acid degradation operon negative regulatory protein PaaX 5 273 2.7E-100 T 12-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 N288_11300 490f1c5a1c411c01bdccfa13196c42fd 291 Gene3D G3DSA:1.20.58.1460 195 270 2.1E-5 T 12-10-2018 N288_25945 17b4c23edca359c7ff7b904510415936 176 Gene3D G3DSA:1.20.144.10 54 173 4.2E-22 T 12-10-2018 N288_25945 17b4c23edca359c7ff7b904510415936 176 SMART SM00014 59 170 2.6E-13 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase N288_25945 17b4c23edca359c7ff7b904510415936 176 SUPERFAMILY SSF48317 6 173 3.66E-36 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily N288_25945 17b4c23edca359c7ff7b904510415936 176 Pfam PF01569 PAP2 superfamily 64 174 2.5E-20 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase N288_05570 1c3540e743fb4d313105fad72a511d5a 242 Gene3D G3DSA:3.40.30.10 1 209 1.9E-78 T 12-10-2018 N288_05570 1c3540e743fb4d313105fad72a511d5a 242 Pfam PF01323 DSBA-like thioredoxin domain 2 206 2.3E-44 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 N288_05570 1c3540e743fb4d313105fad72a511d5a 242 SUPERFAMILY SSF52833 1 212 7.01E-45 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_22780 e72a972fa1552709de3ed4805f32c3b9 646 Gene3D G3DSA:3.40.50.2300 1 104 1.1E-40 T 12-10-2018 N288_22780 e72a972fa1552709de3ed4805f32c3b9 646 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 547 563 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain N288_22780 e72a972fa1552709de3ed4805f32c3b9 646 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 6 87 3.1E-31 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 N288_22780 e72a972fa1552709de3ed4805f32c3b9 646 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 501 644 9.4E-39 T 12-10-2018 IPR002178 PTS EIIA type-2 domain N288_22780 e72a972fa1552709de3ed4805f32c3b9 646 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 95 3.0E-17 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 N288_22780 e72a972fa1552709de3ed4805f32c3b9 646 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 115 458 2.6E-94 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 N288_22780 e72a972fa1552709de3ed4805f32c3b9 646 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 503 629 2.8E-41 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 N288_22780 e72a972fa1552709de3ed4805f32c3b9 646 Pfam PF02378 Phosphotransferase system, EIIC 130 404 1.0E-20 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 N288_22780 e72a972fa1552709de3ed4805f32c3b9 646 SUPERFAMILY SSF52794 3 102 1.43E-36 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 N288_22780 e72a972fa1552709de3ed4805f32c3b9 646 SUPERFAMILY SSF55804 497 644 5.36E-39 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 N288_22780 e72a972fa1552709de3ed4805f32c3b9 646 Gene3D G3DSA:3.40.930.10 493 646 1.6E-44 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 N288_18885 4b463ad81c4cd9b4279b40c4b2e06abb 94 Pfam PF02699 Preprotein translocase subunit 7 81 5.3E-29 T 12-10-2018 IPR003849 Preprotein translocase YajC N288_18885 4b463ad81c4cd9b4279b40c4b2e06abb 94 SMART SM01323 2 84 5.1E-41 T 12-10-2018 IPR003849 Preprotein translocase YajC N288_18885 4b463ad81c4cd9b4279b40c4b2e06abb 94 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 3 83 1.6E-30 T 12-10-2018 IPR003849 Preprotein translocase YajC N288_18885 4b463ad81c4cd9b4279b40c4b2e06abb 94 PRINTS PR01853 Bacterial YajC preprotein translocase signature 4 24 1.3E-13 T 12-10-2018 IPR003849 Preprotein translocase YajC N288_18885 4b463ad81c4cd9b4279b40c4b2e06abb 94 PRINTS PR01853 Bacterial YajC preprotein translocase signature 24 42 1.3E-13 T 12-10-2018 IPR003849 Preprotein translocase YajC N288_03140 7bf1315cfa8683f53bfe967cb6bffc2d 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 248 9.9E-111 T 12-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 N288_03140 7bf1315cfa8683f53bfe967cb6bffc2d 255 SUPERFAMILY SSF110399 1 240 2.09E-81 T 12-10-2018 N288_03140 7bf1315cfa8683f53bfe967cb6bffc2d 255 Gene3D G3DSA:3.20.20.70 1 255 1.8E-118 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_03140 7bf1315cfa8683f53bfe967cb6bffc2d 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 254 42.885 T 12-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 N288_16620 c6428d7d8bc60ed08a3bda519d0647b7 279 SMART SM00450 5 131 1.8E-21 T 12-10-2018 IPR001763 Rhodanese-like domain N288_16620 c6428d7d8bc60ed08a3bda519d0647b7 279 SMART SM00450 155 271 3.1E-18 T 12-10-2018 IPR001763 Rhodanese-like domain N288_16620 c6428d7d8bc60ed08a3bda519d0647b7 279 Gene3D G3DSA:3.40.250.10 2 147 1.6E-45 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_16620 c6428d7d8bc60ed08a3bda519d0647b7 279 Pfam PF00581 Rhodanese-like domain 8 127 2.3E-20 T 12-10-2018 IPR001763 Rhodanese-like domain N288_16620 c6428d7d8bc60ed08a3bda519d0647b7 279 Pfam PF00581 Rhodanese-like domain 166 266 9.6E-15 T 12-10-2018 IPR001763 Rhodanese-like domain N288_16620 c6428d7d8bc60ed08a3bda519d0647b7 279 ProSitePatterns PS00380 Rhodanese signature 1. 38 49 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 N288_16620 c6428d7d8bc60ed08a3bda519d0647b7 279 Gene3D G3DSA:3.40.250.10 155 278 6.5E-33 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_16620 c6428d7d8bc60ed08a3bda519d0647b7 279 SUPERFAMILY SSF52821 7 151 1.31E-38 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_16620 c6428d7d8bc60ed08a3bda519d0647b7 279 SUPERFAMILY SSF52821 150 275 2.62E-30 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 9 642 0.0 T 12-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 SMART SM00433 39 635 0.0 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 Gene3D G3DSA:3.30.565.10 7 222 1.5E-85 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR01159 DNA gyrase subunit B signature 476 485 2.6E-59 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR01159 DNA gyrase subunit B signature 10 20 2.6E-59 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR01159 DNA gyrase subunit B signature 199 212 2.6E-59 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR01159 DNA gyrase subunit B signature 223 245 2.6E-59 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR01159 DNA gyrase subunit B signature 314 330 2.6E-59 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR01159 DNA gyrase subunit B signature 184 199 2.6E-59 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR01159 DNA gyrase subunit B signature 595 607 2.6E-59 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR01159 DNA gyrase subunit B signature 364 378 2.6E-59 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR01159 DNA gyrase subunit B signature 378 398 2.6E-59 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR01159 DNA gyrase subunit B signature 611 627 2.6E-59 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 570 631 4.8E-30 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 8 640 48.259 T 12-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 SUPERFAMILY SSF56719 400 634 8.63E-86 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 Pfam PF01751 Toprim domain 425 525 1.2E-16 T 12-10-2018 IPR006171 TOPRIM domain N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 Gene3D G3DSA:3.30.230.10 223 404 1.9E-72 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR00418 DNA topoisomerase II family signature 530 542 9.5E-70 T 12-10-2018 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR00418 DNA topoisomerase II family signature 39 54 9.5E-70 T 12-10-2018 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR00418 DNA topoisomerase II family signature 510 527 9.5E-70 T 12-10-2018 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR00418 DNA topoisomerase II family signature 270 283 9.5E-70 T 12-10-2018 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR00418 DNA topoisomerase II family signature 574 590 9.5E-70 T 12-10-2018 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR00418 DNA topoisomerase II family signature 426 440 9.5E-70 T 12-10-2018 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR00418 DNA topoisomerase II family signature 116 130 9.5E-70 T 12-10-2018 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR00418 DNA topoisomerase II family signature 492 508 9.5E-70 T 12-10-2018 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 PRINTS PR00418 DNA topoisomerase II family signature 74 87 9.5E-70 T 12-10-2018 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 Gene3D G3DSA:3.40.50.670 412 644 2.4E-102 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 SUPERFAMILY SSF55874 10 221 1.44E-67 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 SMART SM00387 35 179 2.8E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 SUPERFAMILY SSF54211 224 394 4.17E-54 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 177 2.0E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 Pfam PF00204 DNA gyrase B 224 394 3.2E-58 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 N288_11800 176017b4f13b27b6386a58baca7d1a3d 659 ProSitePatterns PS00177 DNA topoisomerase II signature. 428 436 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 N288_00735 7503ca58880e31aa728626ec75fd68a2 395 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site N288_00735 7503ca58880e31aa728626ec75fd68a2 395 Pfam PF03144 Elongation factor Tu domain 2 225 294 2.0E-18 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 N288_00735 7503ca58880e31aa728626ec75fd68a2 395 Pfam PF03143 Elongation factor Tu C-terminal domain 299 393 3.4E-33 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal N288_00735 7503ca58880e31aa728626ec75fd68a2 395 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 4.6E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 N288_00735 7503ca58880e31aa728626ec75fd68a2 395 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 7.5E-233 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 N288_00735 7503ca58880e31aa728626ec75fd68a2 395 Gene3D G3DSA:2.40.30.10 206 335 1.1E-52 T 12-10-2018 N288_00735 7503ca58880e31aa728626ec75fd68a2 395 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 395 60.281 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 N288_00735 7503ca58880e31aa728626ec75fd68a2 395 Gene3D G3DSA:3.40.50.300 2 203 7.7E-72 T 12-10-2018 N288_00735 7503ca58880e31aa728626ec75fd68a2 395 SUPERFAMILY SSF50447 203 302 7.27E-32 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily N288_00735 7503ca58880e31aa728626ec75fd68a2 395 Gene3D G3DSA:2.40.30.10 339 393 5.1E-27 T 12-10-2018 N288_00735 7503ca58880e31aa728626ec75fd68a2 395 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.9E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_00735 7503ca58880e31aa728626ec75fd68a2 395 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.9E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_00735 7503ca58880e31aa728626ec75fd68a2 395 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.9E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_00735 7503ca58880e31aa728626ec75fd68a2 395 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.9E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_00735 7503ca58880e31aa728626ec75fd68a2 395 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.9E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_00735 7503ca58880e31aa728626ec75fd68a2 395 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.0E-60 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_00735 7503ca58880e31aa728626ec75fd68a2 395 SUPERFAMILY SSF52540 9 226 5.27E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00735 7503ca58880e31aa728626ec75fd68a2 395 SUPERFAMILY SSF50465 299 393 1.24E-34 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal N288_05180 259e0d08bdb0d2c3d4610ed511ac3acc 145 Gene3D G3DSA:1.10.10.10 3 144 3.8E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_05180 259e0d08bdb0d2c3d4610ed511ac3acc 145 SUPERFAMILY SSF46785 6 143 6.17E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_05180 259e0d08bdb0d2c3d4610ed511ac3acc 145 SMART SM00347 27 127 1.8E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_05180 259e0d08bdb0d2c3d4610ed511ac3acc 145 Pfam PF01047 MarR family 34 92 1.4E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 41 384 1.3E-99 T 12-10-2018 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 Gene3D G3DSA:3.40.50.1000 271 546 2.1E-82 T 12-10-2018 IPR023214 HAD superfamily N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 PRINTS PR00941 Cadmium-transporting ATPase signature 3 20 3.3E-40 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 PRINTS PR00941 Cadmium-transporting ATPase signature 94 110 3.3E-40 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 PRINTS PR00941 Cadmium-transporting ATPase signature 155 171 3.3E-40 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 PRINTS PR00941 Cadmium-transporting ATPase signature 20 32 3.3E-40 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 PRINTS PR00941 Cadmium-transporting ATPase signature 174 188 3.3E-40 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 PRINTS PR00941 Cadmium-transporting ATPase signature 74 94 3.3E-40 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 Gene3D G3DSA:3.40.1110.10 301 425 2.1E-82 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 SUPERFAMILY SSF81653 92 189 3.27E-25 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 Gene3D G3DSA:2.70.150.20 68 193 5.9E-36 T 12-10-2018 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 39 597 4.7E-182 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 Pfam PF00702 haloacid dehalogenase-like hydrolase 286 506 5.1E-41 T 12-10-2018 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 SUPERFAMILY SSF56784 289 594 2.92E-51 T 12-10-2018 IPR036412 HAD-like superfamily N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 62 578 2.8E-86 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 441 451 5.4E-24 T 12-10-2018 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 518 530 5.4E-24 T 12-10-2018 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 290 304 5.4E-24 T 12-10-2018 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 139 153 5.4E-24 T 12-10-2018 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 494 513 5.4E-24 T 12-10-2018 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 418 429 5.4E-24 T 12-10-2018 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 Pfam PF00122 E1-E2 ATPase 90 270 1.4E-53 T 12-10-2018 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 SUPERFAMILY SSF81665 41 587 4.45E-19 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 N288_06310 3128ea2a15c7390ad5319678fd9c0471 603 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 292 298 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 N288_10400 e449377cd73b497adc142f1bb17701fd 119 SMART SM00448 2 114 1.6E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_10400 e449377cd73b497adc142f1bb17701fd 119 Gene3D G3DSA:3.40.50.2300 1 119 2.4E-39 T 12-10-2018 N288_10400 e449377cd73b497adc142f1bb17701fd 119 SUPERFAMILY SSF52172 1 119 1.57E-39 T 12-10-2018 IPR011006 CheY-like superfamily N288_10400 e449377cd73b497adc142f1bb17701fd 119 Pfam PF00072 Response regulator receiver domain 4 115 3.4E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_23255 7fe24985da8c6da9905eedd646391f09 665 SUPERFAMILY SSF52518 335 514 7.85E-48 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_23255 7fe24985da8c6da9905eedd646391f09 665 Gene3D G3DSA:3.40.50.970 2 327 2.5E-87 T 12-10-2018 N288_23255 7fe24985da8c6da9905eedd646391f09 665 SMART SM00861 335 511 2.6E-40 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain N288_23255 7fe24985da8c6da9905eedd646391f09 665 Gene3D G3DSA:3.40.50.920 542 665 4.5E-20 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 N288_23255 7fe24985da8c6da9905eedd646391f09 665 SUPERFAMILY SSF52518 10 311 1.46E-70 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_23255 7fe24985da8c6da9905eedd646391f09 665 SUPERFAMILY SSF52922 546 665 1.06E-20 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 N288_23255 7fe24985da8c6da9905eedd646391f09 665 Gene3D G3DSA:3.40.50.970 333 532 1.2E-65 T 12-10-2018 N288_23255 7fe24985da8c6da9905eedd646391f09 665 Pfam PF02780 Transketolase, C-terminal domain 546 657 1.2E-15 T 12-10-2018 IPR033248 Transketolase, C-terminal domain N288_23255 7fe24985da8c6da9905eedd646391f09 665 Pfam PF00676 Dehydrogenase E1 component 22 303 4.3E-53 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 N288_23255 7fe24985da8c6da9905eedd646391f09 665 Pfam PF02779 Transketolase, pyrimidine binding domain 340 510 8.2E-33 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain N288_04870 6320103ee045585d3306dad78be7284a 543 Gene3D G3DSA:2.60.120.200 329 534 1.0E-64 T 12-10-2018 N288_04870 6320103ee045585d3306dad78be7284a 543 Pfam PF04616 Glycosyl hydrolases family 43 4 302 8.2E-109 T 12-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 N288_04870 6320103ee045585d3306dad78be7284a 543 Gene3D G3DSA:2.115.10.20 1 327 8.6E-110 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily N288_04870 6320103ee045585d3306dad78be7284a 543 SUPERFAMILY SSF49899 326 533 1.98E-73 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily N288_04870 6320103ee045585d3306dad78be7284a 543 SUPERFAMILY SSF75005 4 321 5.42E-107 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily N288_04870 6320103ee045585d3306dad78be7284a 543 Pfam PF07081 Protein of unknown function (DUF1349) 377 531 5.0E-9 T 12-10-2018 IPR009784 Protein of unknown function DUF1349 N288_00020 14860ccb71285c7570d07c3abb9a27f1 70 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 4 62 3.3E-29 T 12-10-2018 IPR014330 RNA-binding S4-related,YaaA N288_00020 14860ccb71285c7570d07c3abb9a27f1 70 SUPERFAMILY SSF55174 1 65 2.35E-16 T 12-10-2018 N288_00020 14860ccb71285c7570d07c3abb9a27f1 70 Pfam PF13275 S4 domain 4 68 9.4E-27 T 12-10-2018 N288_00020 14860ccb71285c7570d07c3abb9a27f1 70 Gene3D G3DSA:3.10.290.10 1 65 5.5E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 N288_03565 4438dad395a6523ed2c7b2f66c69282f 495 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 1 495 45.832 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 N288_03565 4438dad395a6523ed2c7b2f66c69282f 495 Pfam PF00221 Aromatic amino acid lyase 9 467 1.5E-203 T 12-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 N288_03565 4438dad395a6523ed2c7b2f66c69282f 495 SUPERFAMILY SSF48557 2 493 1.33E-199 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 N288_03565 4438dad395a6523ed2c7b2f66c69282f 495 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 2 493 4.9E-226 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 N288_03565 4438dad395a6523ed2c7b2f66c69282f 495 Gene3D G3DSA:1.20.200.10 196 494 2.8E-127 T 12-10-2018 N288_03565 4438dad395a6523ed2c7b2f66c69282f 495 Gene3D G3DSA:1.10.275.10 1 195 6.4E-72 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal N288_03565 4438dad395a6523ed2c7b2f66c69282f 495 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 137 153 - T 12-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 N288_19130 9033b743b551dc177d13c2526b452c55 166 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 32 2.5E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site N288_19130 9033b743b551dc177d13c2526b452c55 166 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 31 1.4E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site N288_19130 9033b743b551dc177d13c2526b452c55 166 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site N288_08515 e260dd72716698350aab05e7f68dbe30 311 PIRSF PIRSF002849 1 307 5.3E-124 T 12-10-2018 N288_08515 e260dd72716698350aab05e7f68dbe30 311 Gene3D G3DSA:3.40.50.300 16 183 1.6E-46 T 12-10-2018 N288_08515 e260dd72716698350aab05e7f68dbe30 311 SUPERFAMILY SSF52540 4 279 3.09E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_08515 e260dd72716698350aab05e7f68dbe30 311 SMART SM00382 32 174 0.0089 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_08515 e260dd72716698350aab05e7f68dbe30 311 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 166 5.5E-60 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 N288_08515 e260dd72716698350aab05e7f68dbe30 311 Gene3D G3DSA:1.10.8.300 195 302 1.1E-29 T 12-10-2018 N288_25720 74e0d079c817bafc59cbdf7d95ab235c 536 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 14 24 8.7E-30 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 N288_25720 74e0d079c817bafc59cbdf7d95ab235c 536 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 1 13 8.7E-30 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 N288_25720 74e0d079c817bafc59cbdf7d95ab235c 536 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 75 87 8.7E-30 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 N288_25720 74e0d079c817bafc59cbdf7d95ab235c 536 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 30 42 8.7E-30 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 N288_25720 74e0d079c817bafc59cbdf7d95ab235c 536 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 8.7E-30 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 N288_25720 74e0d079c817bafc59cbdf7d95ab235c 536 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 317 323 8.7E-30 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 N288_25720 74e0d079c817bafc59cbdf7d95ab235c 536 Gene3D G3DSA:3.50.50.60 2 360 2.5E-133 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_25720 74e0d079c817bafc59cbdf7d95ab235c 536 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 6 23 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 N288_25720 74e0d079c817bafc59cbdf7d95ab235c 536 Gene3D G3DSA:3.30.9.10 83 324 2.5E-133 T 12-10-2018 N288_25720 74e0d079c817bafc59cbdf7d95ab235c 536 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 385 512 6.0E-25 T 12-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 N288_25720 74e0d079c817bafc59cbdf7d95ab235c 536 SUPERFAMILY SSF54373 230 323 4.32E-9 T 12-10-2018 N288_25720 74e0d079c817bafc59cbdf7d95ab235c 536 Gene3D G3DSA:1.10.8.870 401 533 1.2E-40 T 12-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 N288_25720 74e0d079c817bafc59cbdf7d95ab235c 536 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 N288_25720 74e0d079c817bafc59cbdf7d95ab235c 536 SUPERFAMILY SSF51905 2 218 1.04E-33 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_25720 74e0d079c817bafc59cbdf7d95ab235c 536 Pfam PF01266 FAD dependent oxidoreductase 2 356 4.4E-52 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 N288_09795 83d2f1a392952f0f138db7770763c628 678 Gene3D G3DSA:1.10.490.80 577 675 1.7E-28 T 12-10-2018 N288_09795 83d2f1a392952f0f138db7770763c628 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 121 137 5.3E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 N288_09795 83d2f1a392952f0f138db7770763c628 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 22 35 5.3E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 N288_09795 83d2f1a392952f0f138db7770763c628 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 59 78 5.3E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 N288_09795 83d2f1a392952f0f138db7770763c628 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 221 235 5.3E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 N288_09795 83d2f1a392952f0f138db7770763c628 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 140 158 5.3E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 N288_09795 83d2f1a392952f0f138db7770763c628 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 170 187 5.3E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 N288_09795 83d2f1a392952f0f138db7770763c628 678 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 4 675 2.5E-275 T 12-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 N288_09795 83d2f1a392952f0f138db7770763c628 678 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 126 149 - T 12-10-2018 IPR025505 FHIPEP conserved site N288_09795 83d2f1a392952f0f138db7770763c628 678 Gene3D G3DSA:1.10.8.540 486 575 4.3E-32 T 12-10-2018 N288_09795 83d2f1a392952f0f138db7770763c628 678 Gene3D G3DSA:3.40.30.60 342 485 8.9E-54 T 12-10-2018 N288_09795 83d2f1a392952f0f138db7770763c628 678 Pfam PF00771 FHIPEP family 15 667 5.8E-274 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 N288_09795 83d2f1a392952f0f138db7770763c628 678 PIRSF PIRSF005419 1 678 3.0E-261 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 N288_03115 fc079577442deee38666b06e9c6fcfc0 308 Pfam PF00892 EamA-like transporter family 152 285 5.6E-32 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_03115 fc079577442deee38666b06e9c6fcfc0 308 Pfam PF00892 EamA-like transporter family 5 138 1.2E-28 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_03115 fc079577442deee38666b06e9c6fcfc0 308 SUPERFAMILY SSF103481 189 288 1.96E-14 T 12-10-2018 N288_03115 fc079577442deee38666b06e9c6fcfc0 308 SUPERFAMILY SSF103481 38 141 1.31E-15 T 12-10-2018 N288_11080 5f74021ebf5fb8acabac34abc8e9574e 311 Gene3D G3DSA:1.10.287.950 127 310 5.7E-38 T 12-10-2018 N288_11080 5f74021ebf5fb8acabac34abc8e9574e 311 SUPERFAMILY SSF58104 108 303 2.22E-45 T 12-10-2018 N288_11080 5f74021ebf5fb8acabac34abc8e9574e 311 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 165 300 1.2E-31 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_11080 5f74021ebf5fb8acabac34abc8e9574e 311 SUPERFAMILY SSF55785 30 131 1.34E-21 T 12-10-2018 IPR035965 PAS domain superfamily N288_11080 5f74021ebf5fb8acabac34abc8e9574e 311 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 135 7.8E-12 T 12-10-2018 IPR000014 PAS domain N288_11080 5f74021ebf5fb8acabac34abc8e9574e 311 SMART SM00283 119 311 5.3E-8 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_11080 5f74021ebf5fb8acabac34abc8e9574e 311 SMART SM00086 92 134 0.0064 T 12-10-2018 IPR001610 PAC motif N288_11080 5f74021ebf5fb8acabac34abc8e9574e 311 Gene3D G3DSA:3.30.450.20 12 126 3.3E-18 T 12-10-2018 N288_11080 5f74021ebf5fb8acabac34abc8e9574e 311 Pfam PF13426 PAS domain 33 133 2.1E-11 T 12-10-2018 IPR000014 PAS domain N288_13190 b88b86e5a6c0d4680a84b3898e192217 322 Gene3D G3DSA:1.20.1530.20 6 315 7.7E-60 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily N288_13190 b88b86e5a6c0d4680a84b3898e192217 322 Pfam PF01758 Sodium Bile acid symporter family 42 212 1.9E-16 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 N288_23980 75aa59bc4fad677b614174050895c0fc 556 Pfam PF05746 DALR anticodon binding domain 438 556 5.6E-41 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 N288_23980 75aa59bc4fad677b614174050895c0fc 556 SMART SM00836 437 556 3.0E-61 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 N288_23980 75aa59bc4fad677b614174050895c0fc 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 2.8E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 N288_23980 75aa59bc4fad677b614174050895c0fc 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 2.8E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 N288_23980 75aa59bc4fad677b614174050895c0fc 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 306 327 2.8E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 N288_23980 75aa59bc4fad677b614174050895c0fc 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 2.8E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 N288_23980 75aa59bc4fad677b614174050895c0fc 556 Gene3D G3DSA:3.30.1360.70 2 112 8.0E-30 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 N288_23980 75aa59bc4fad677b614174050895c0fc 556 Pfam PF00750 tRNA synthetases class I (R) 104 400 1.9E-30 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 N288_23980 75aa59bc4fad677b614174050895c0fc 556 Hamap MF_00123 Arginine--tRNA ligase [argS]. 9 556 29.261 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 N288_23980 75aa59bc4fad677b614174050895c0fc 556 Gene3D G3DSA:1.10.730.10 432 556 4.2E-179 T 12-10-2018 N288_23980 75aa59bc4fad677b614174050895c0fc 556 SUPERFAMILY SSF52374 118 448 7.32E-98 T 12-10-2018 N288_23980 75aa59bc4fad677b614174050895c0fc 556 Gene3D G3DSA:3.40.50.620 124 431 4.2E-179 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_23980 75aa59bc4fad677b614174050895c0fc 556 SUPERFAMILY SSF47323 432 556 3.86E-38 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_23980 75aa59bc4fad677b614174050895c0fc 556 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 10 94 4.1E-27 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 N288_23980 75aa59bc4fad677b614174050895c0fc 556 SMART SM01016 9 95 3.5E-37 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 N288_23980 75aa59bc4fad677b614174050895c0fc 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 134 143 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_23980 75aa59bc4fad677b614174050895c0fc 556 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 8 556 8.4E-182 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 N288_23980 75aa59bc4fad677b614174050895c0fc 556 SUPERFAMILY SSF55190 5 115 1.12E-28 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 N288_18870 b49df625c6ac2afbd23ced2eb8c3078a 520 Pfam PF01943 Polysaccharide biosynthesis protein 4 305 5.5E-54 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 N288_18870 b49df625c6ac2afbd23ced2eb8c3078a 520 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 358 498 1.2E-16 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain N288_18870 b49df625c6ac2afbd23ced2eb8c3078a 520 PIRSF PIRSF038958 1 514 1.4E-171 T 12-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type N288_18870 b49df625c6ac2afbd23ced2eb8c3078a 520 TIGRFAM TIGR02900 spore_V_B: stage V sporulation protein B 4 491 3.9E-173 T 12-10-2018 IPR014249 Sporulation stage V protein B N288_18810 996ee5ec7c10e9da0c6614e90a9bf994 591 Gene3D G3DSA:3.30.930.10 121 584 1.9E-197 T 12-10-2018 N288_18810 996ee5ec7c10e9da0c6614e90a9bf994 591 Gene3D G3DSA:2.40.50.140 1 110 1.0E-33 T 12-10-2018 N288_18810 996ee5ec7c10e9da0c6614e90a9bf994 591 Pfam PF02938 GAD domain 313 407 1.1E-31 T 12-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 N288_18810 996ee5ec7c10e9da0c6614e90a9bf994 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 559 1.2E-111 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_18810 996ee5ec7c10e9da0c6614e90a9bf994 591 Gene3D G3DSA:3.30.1360.30 277 421 1.9E-197 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 N288_18810 996ee5ec7c10e9da0c6614e90a9bf994 591 SUPERFAMILY SSF55681 113 585 3.2E-109 T 12-10-2018 N288_18810 996ee5ec7c10e9da0c6614e90a9bf994 591 Pfam PF01336 OB-fold nucleic acid binding domain 20 105 3.9E-17 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 N288_18810 996ee5ec7c10e9da0c6614e90a9bf994 591 SUPERFAMILY SSF55261 294 421 4.25E-43 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 N288_18810 996ee5ec7c10e9da0c6614e90a9bf994 591 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 3 586 35.127 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 N288_18810 996ee5ec7c10e9da0c6614e90a9bf994 591 SUPERFAMILY SSF50249 4 108 1.26E-31 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_18810 996ee5ec7c10e9da0c6614e90a9bf994 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 476 492 9.4E-27 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_18810 996ee5ec7c10e9da0c6614e90a9bf994 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 212 225 9.4E-27 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_18810 996ee5ec7c10e9da0c6614e90a9bf994 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 520 534 9.4E-27 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_18810 996ee5ec7c10e9da0c6614e90a9bf994 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 195 207 9.4E-27 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_18810 996ee5ec7c10e9da0c6614e90a9bf994 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 2 588 8.0E-262 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 N288_25380 225434e62e013a8ba407d1f5453e72b6 458 SMART SM00304 187 239 2.8E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_25380 225434e62e013a8ba407d1f5453e72b6 458 Gene3D G3DSA:3.30.565.10 310 458 1.0E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_25380 225434e62e013a8ba407d1f5453e72b6 458 SMART SM00388 240 305 4.4E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_25380 225434e62e013a8ba407d1f5453e72b6 458 SMART SM00387 349 458 2.1E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_25380 225434e62e013a8ba407d1f5453e72b6 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 456 2.1E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_25380 225434e62e013a8ba407d1f5453e72b6 458 Gene3D G3DSA:1.10.8.500 186 235 3.7E-11 T 12-10-2018 N288_25380 225434e62e013a8ba407d1f5453e72b6 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 241 304 1.3E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_25380 225434e62e013a8ba407d1f5453e72b6 458 Pfam PF00672 HAMP domain 188 236 1.0E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_25380 225434e62e013a8ba407d1f5453e72b6 458 SUPERFAMILY SSF47384 223 305 6.28E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_25380 225434e62e013a8ba407d1f5453e72b6 458 SUPERFAMILY SSF158472 189 236 1.96E-10 T 12-10-2018 N288_25380 225434e62e013a8ba407d1f5453e72b6 458 SUPERFAMILY SSF55874 295 457 8.12E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_25380 225434e62e013a8ba407d1f5453e72b6 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 2.8E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_25380 225434e62e013a8ba407d1f5453e72b6 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 2.8E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_25380 225434e62e013a8ba407d1f5453e72b6 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 2.8E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_25380 225434e62e013a8ba407d1f5453e72b6 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 2.8E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_25380 225434e62e013a8ba407d1f5453e72b6 458 Gene3D G3DSA:1.10.287.130 236 306 4.3E-16 T 12-10-2018 N288_23250 5ba87806c17a2822fb19ffbe256ea03b 374 Gene3D G3DSA:2.40.50.100 4 103 4.4E-17 T 12-10-2018 N288_23250 5ba87806c17a2822fb19ffbe256ea03b 374 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 N288_23250 5ba87806c17a2822fb19ffbe256ea03b 374 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 274 307 6.8E-6 T 12-10-2018 IPR001451 Hexapeptide repeat N288_23250 5ba87806c17a2822fb19ffbe256ea03b 374 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 329 362 2.2E-4 T 12-10-2018 IPR001451 Hexapeptide repeat N288_23250 5ba87806c17a2822fb19ffbe256ea03b 374 SUPERFAMILY SSF51161 167 368 4.02E-37 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily N288_23250 5ba87806c17a2822fb19ffbe256ea03b 374 Pfam PF00364 Biotin-requiring enzyme 6 77 9.0E-11 T 12-10-2018 IPR000089 Biotin/lipoyl attachment N288_23250 5ba87806c17a2822fb19ffbe256ea03b 374 Gene3D G3DSA:3.40.50.20 160 260 6.2E-24 T 12-10-2018 N288_23250 5ba87806c17a2822fb19ffbe256ea03b 374 Gene3D G3DSA:2.160.10.10 262 370 9.4E-24 T 12-10-2018 N288_23250 5ba87806c17a2822fb19ffbe256ea03b 374 SUPERFAMILY SSF51230 3 82 1.28E-14 T 12-10-2018 IPR011053 Single hybrid motif N288_23250 5ba87806c17a2822fb19ffbe256ea03b 374 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 171 369 8.0E-52 T 12-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like N288_03560 4bc9919b0a115c60ce0b9315a97354c3 233 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 15 171 4.6E-41 T 12-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 N288_03560 4bc9919b0a115c60ce0b9315a97354c3 233 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 50 72 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 N288_03560 4bc9919b0a115c60ce0b9315a97354c3 233 Pfam PF01066 CDP-alcohol phosphatidyltransferase 9 72 3.0E-13 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 N288_03560 4bc9919b0a115c60ce0b9315a97354c3 233 Gene3D G3DSA:1.20.120.1760 1 170 3.4E-11 T 12-10-2018 N288_03750 d516728e14d597052a73e68df6a96d7e 240 Gene3D G3DSA:3.40.50.150 88 221 3.8E-24 T 12-10-2018 N288_03750 d516728e14d597052a73e68df6a96d7e 240 Pfam PF08241 Methyltransferase domain 104 154 5.7E-14 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 N288_03750 d516728e14d597052a73e68df6a96d7e 240 SUPERFAMILY SSF53335 102 217 2.52E-22 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_19925 ab6610bf2fde9e1f7440a6ce4c4afc93 359 Gene3D G3DSA:3.20.20.70 94 358 1.8E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_19925 ab6610bf2fde9e1f7440a6ce4c4afc93 359 Pfam PF00793 DAHP synthetase I family 112 352 1.7E-84 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 N288_19925 ab6610bf2fde9e1f7440a6ce4c4afc93 359 Gene3D G3DSA:1.20.59.10 9 93 3.7E-28 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 N288_19925 ab6610bf2fde9e1f7440a6ce4c4afc93 359 TIGRFAM TIGR01801 CM_A: chorismate mutase 2 103 7.3E-44 T 12-10-2018 IPR010954 Chorismate mutase, Firmicutes/Deinococcus KEGG: 00400+2.5.1.54+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6164|MetaCyc: PWY-6627|MetaCyc: PWY-7626 N288_19925 ab6610bf2fde9e1f7440a6ce4c4afc93 359 SUPERFAMILY SSF51569 32 353 2.38E-103 T 12-10-2018 N288_19925 ab6610bf2fde9e1f7440a6ce4c4afc93 359 SMART SM00830 11 90 1.2E-23 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 N288_19925 ab6610bf2fde9e1f7440a6ce4c4afc93 359 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 96 352 8.9E-123 T 12-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 N288_19925 ab6610bf2fde9e1f7440a6ce4c4afc93 359 Pfam PF01817 Chorismate mutase type II 11 88 3.0E-18 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 N288_16985 7c5b80f6a0ab13ec424d7f1ccc6534aa 421 Pfam PF14559 Tetratricopeptide repeat 54 109 1.2E-6 T 12-10-2018 N288_16985 7c5b80f6a0ab13ec424d7f1ccc6534aa 421 SUPERFAMILY SSF48452 178 408 2.15E-21 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_16985 7c5b80f6a0ab13ec424d7f1ccc6534aa 421 Pfam PF13424 Tetratricopeptide repeat 139 200 2.7E-8 T 12-10-2018 N288_16985 7c5b80f6a0ab13ec424d7f1ccc6534aa 421 Pfam PF13432 Tetratricopeptide repeat 345 406 9.4E-6 T 12-10-2018 N288_16985 7c5b80f6a0ab13ec424d7f1ccc6534aa 421 Gene3D G3DSA:1.25.40.10 201 312 3.0E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_16985 7c5b80f6a0ab13ec424d7f1ccc6534aa 421 Gene3D G3DSA:1.25.40.10 313 416 9.0E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_16985 7c5b80f6a0ab13ec424d7f1ccc6534aa 421 Gene3D G3DSA:1.25.40.10 3 200 3.5E-29 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_16985 7c5b80f6a0ab13ec424d7f1ccc6534aa 421 SMART SM00028 237 270 12.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_16985 7c5b80f6a0ab13ec424d7f1ccc6534aa 421 SMART SM00028 32 65 110.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_16985 7c5b80f6a0ab13ec424d7f1ccc6534aa 421 SMART SM00028 170 203 22.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_16985 7c5b80f6a0ab13ec424d7f1ccc6534aa 421 SMART SM00028 373 406 17.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_16985 7c5b80f6a0ab13ec424d7f1ccc6534aa 421 SMART SM00028 134 167 3.6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_16985 7c5b80f6a0ab13ec424d7f1ccc6534aa 421 SMART SM00028 339 372 120.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_16985 7c5b80f6a0ab13ec424d7f1ccc6534aa 421 SMART SM00028 271 304 290.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_16985 7c5b80f6a0ab13ec424d7f1ccc6534aa 421 SMART SM00028 100 133 380.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_16985 7c5b80f6a0ab13ec424d7f1ccc6534aa 421 SMART SM00028 66 99 81.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_16985 7c5b80f6a0ab13ec424d7f1ccc6534aa 421 SUPERFAMILY SSF48452 32 199 3.34E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_14360 4ae9732446a62fb7633d274c5ae487e4 99 Pfam PF17247 Family of unknown function (DUF5316) 24 96 2.9E-30 T 12-10-2018 IPR035167 Protein of unknown function DUF5316 N288_17215 8ff51c2bc89cdaf980c658fb5aecd0a8 240 Gene3D G3DSA:3.10.350.10 177 240 5.5E-14 T 12-10-2018 IPR036779 LysM domain superfamily N288_17215 8ff51c2bc89cdaf980c658fb5aecd0a8 240 SMART SM00257 191 237 2.5E-11 T 12-10-2018 IPR018392 LysM domain N288_17215 8ff51c2bc89cdaf980c658fb5aecd0a8 240 SUPERFAMILY SSF54106 190 237 3.14E-8 T 12-10-2018 N288_17215 8ff51c2bc89cdaf980c658fb5aecd0a8 240 Pfam PF01476 LysM domain 192 237 2.4E-11 T 12-10-2018 IPR018392 LysM domain N288_07895 9551e2e376588a6672b1bef78a67a4c7 240 Gene3D G3DSA:3.40.50.1820 1 240 1.4E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_07895 9551e2e376588a6672b1bef78a67a4c7 240 SUPERFAMILY SSF53474 4 239 5.35E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_07895 9551e2e376588a6672b1bef78a67a4c7 240 Pfam PF00756 Putative esterase 15 238 3.1E-51 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 N288_21255 602cb932d99e9229a4a66f31038c649f 351 Pfam PF01032 FecCD transport family 34 347 7.2E-95 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 N288_21255 602cb932d99e9229a4a66f31038c649f 351 Gene3D G3DSA:1.10.3470.10 19 351 8.8E-99 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_21255 602cb932d99e9229a4a66f31038c649f 351 SUPERFAMILY SSF81345 16 347 1.83E-81 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_15845 4002a055078db9328dd52ff1b6ca6ad8 69 Pfam PF14169 Cold-inducible protein YdjO 3 61 3.3E-28 T 12-10-2018 IPR025916 Cold-inducible protein YdjO N288_17680 0f68af64614e925073b8974762e88806 240 PIRSF PIRSF039085 1 240 2.2E-115 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 N288_17680 0f68af64614e925073b8974762e88806 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_17680 0f68af64614e925073b8974762e88806 240 SUPERFAMILY SSF52540 1 235 1.3E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_17680 0f68af64614e925073b8974762e88806 240 Pfam PF00005 ABC transporter 17 165 2.9E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_17680 0f68af64614e925073b8974762e88806 240 Gene3D G3DSA:3.40.50.300 1 240 1.9E-79 T 12-10-2018 N288_17680 0f68af64614e925073b8974762e88806 240 SMART SM00382 26 213 1.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_24185 570708b6f0132ca70bf001617e673d28 288 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 255 6.5E-28 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 N288_24185 570708b6f0132ca70bf001617e673d28 288 Gene3D G3DSA:3.30.1240.10 82 211 1.1E-80 T 12-10-2018 N288_24185 570708b6f0132ca70bf001617e673d28 288 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 282 7.6E-67 T 12-10-2018 N288_24185 570708b6f0132ca70bf001617e673d28 288 Gene3D G3DSA:3.40.50.1000 3 279 1.1E-80 T 12-10-2018 IPR023214 HAD superfamily N288_24185 570708b6f0132ca70bf001617e673d28 288 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 282 4.9E-55 T 12-10-2018 IPR000150 Cof family GO:0016787 N288_24185 570708b6f0132ca70bf001617e673d28 288 ProSitePatterns PS01229 Hypothetical cof family signature 2. 236 258 - T 12-10-2018 N288_24185 570708b6f0132ca70bf001617e673d28 288 SUPERFAMILY SSF56784 1 286 5.65E-66 T 12-10-2018 IPR036412 HAD-like superfamily N288_04855 592ad58a1b8496b7d7276ca02ea707e5 227 SMART SM00862 150 226 8.5E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_04855 592ad58a1b8496b7d7276ca02ea707e5 227 SUPERFAMILY SSF52172 1 129 1.05E-40 T 12-10-2018 IPR011006 CheY-like superfamily N288_04855 592ad58a1b8496b7d7276ca02ea707e5 227 Pfam PF00072 Response regulator receiver domain 4 113 3.3E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_04855 592ad58a1b8496b7d7276ca02ea707e5 227 SMART SM00448 2 112 5.1E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_04855 592ad58a1b8496b7d7276ca02ea707e5 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 1.6E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_04855 592ad58a1b8496b7d7276ca02ea707e5 227 SUPERFAMILY SSF46894 127 226 3.68E-30 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_04855 592ad58a1b8496b7d7276ca02ea707e5 227 Gene3D G3DSA:1.10.10.10 130 227 5.8E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_04855 592ad58a1b8496b7d7276ca02ea707e5 227 Gene3D G3DSA:3.40.50.2300 1 129 2.4E-37 T 12-10-2018 N288_10790 e78570ccc3d618b93f622d0f976fb5c2 497 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 107 496 4.0E-162 T 12-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 N288_10790 e78570ccc3d618b93f622d0f976fb5c2 497 SMART SM00858 11 82 2.3E-12 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 N288_10790 e78570ccc3d618b93f622d0f976fb5c2 497 Pfam PF08666 SAF domain 11 81 6.2E-11 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 N288_10790 e78570ccc3d618b93f622d0f976fb5c2 497 Gene3D G3DSA:3.90.1210.30 3 85 2.2E-27 T 12-10-2018 N288_12685 cc3782a9d7f774f284262dbd0156aa1e 383 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 240 360 8.9E-14 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain N288_12685 cc3782a9d7f774f284262dbd0156aa1e 383 Gene3D G3DSA:1.20.140.10 234 379 1.1E-31 T 12-10-2018 N288_12685 cc3782a9d7f774f284262dbd0156aa1e 383 SUPERFAMILY SSF47203 234 381 3.87E-26 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 N288_12685 cc3782a9d7f774f284262dbd0156aa1e 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 30 94 4.1E-6 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 N288_12685 cc3782a9d7f774f284262dbd0156aa1e 383 SUPERFAMILY SSF56645 20 221 1.11E-38 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 N288_12685 cc3782a9d7f774f284262dbd0156aa1e 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 216 8.3E-15 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 N288_12685 cc3782a9d7f774f284262dbd0156aa1e 383 PIRSF PIRSF016578 136 228 5.3E-13 T 12-10-2018 N288_12685 cc3782a9d7f774f284262dbd0156aa1e 383 PIRSF PIRSF016578 231 382 1.1E-10 T 12-10-2018 N288_12685 cc3782a9d7f774f284262dbd0156aa1e 383 PIRSF PIRSF016578 1 98 4.8E-8 T 12-10-2018 N288_12685 cc3782a9d7f774f284262dbd0156aa1e 383 Gene3D G3DSA:1.10.540.10 5 107 1.1E-17 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 N288_12685 cc3782a9d7f774f284262dbd0156aa1e 383 Gene3D G3DSA:2.40.110.10 134 223 6.5E-21 T 12-10-2018 N288_17915 f078cff8d08457dc40ffde725da2083d 185 PIRSF PIRSF005901 1 185 1.3E-72 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP N288_17915 f078cff8d08457dc40ffde725da2083d 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 2.7E-28 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like N288_17915 f078cff8d08457dc40ffde725da2083d 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 4.7E-82 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 N288_17915 f078cff8d08457dc40ffde725da2083d 185 Gene3D G3DSA:2.40.50.140 128 185 4.4E-27 T 12-10-2018 N288_17915 f078cff8d08457dc40ffde725da2083d 185 Gene3D G3DSA:2.40.50.140 64 127 4.3E-27 T 12-10-2018 N288_17915 f078cff8d08457dc40ffde725da2083d 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 51.136 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 N288_17915 f078cff8d08457dc40ffde725da2083d 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 1.8E-26 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 N288_17915 f078cff8d08457dc40ffde725da2083d 185 SUPERFAMILY SSF50249 128 185 1.2E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_17915 f078cff8d08457dc40ffde725da2083d 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site N288_17915 f078cff8d08457dc40ffde725da2083d 185 SUPERFAMILY SSF50104 1 62 7.22E-22 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily N288_17915 f078cff8d08457dc40ffde725da2083d 185 SMART SM00841 129 184 1.9E-35 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 N288_17915 f078cff8d08457dc40ffde725da2083d 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 7.5E-23 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 N288_17915 f078cff8d08457dc40ffde725da2083d 185 SMART SM01185 67 121 1.6E-26 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 N288_17915 f078cff8d08457dc40ffde725da2083d 185 Gene3D G3DSA:2.30.30.30 1 62 6.3E-31 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 N288_17915 f078cff8d08457dc40ffde725da2083d 185 SUPERFAMILY SSF50249 65 129 4.71E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_11520 974e4da6c0c40c0e2e73a154f3a898e2 331 Pfam PF02780 Transketolase, C-terminal domain 200 321 4.2E-34 T 12-10-2018 IPR033248 Transketolase, C-terminal domain N288_11520 974e4da6c0c40c0e2e73a154f3a898e2 331 Pfam PF02779 Transketolase, pyrimidine binding domain 10 184 1.0E-44 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain N288_11520 974e4da6c0c40c0e2e73a154f3a898e2 331 Gene3D G3DSA:3.40.50.920 199 330 7.5E-41 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 N288_11520 974e4da6c0c40c0e2e73a154f3a898e2 331 SUPERFAMILY SSF52922 195 328 2.49E-38 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 N288_11520 974e4da6c0c40c0e2e73a154f3a898e2 331 SMART SM00861 10 185 1.9E-61 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain N288_11520 974e4da6c0c40c0e2e73a154f3a898e2 331 SUPERFAMILY SSF52518 9 198 7.5E-65 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_11520 974e4da6c0c40c0e2e73a154f3a898e2 331 Gene3D G3DSA:3.40.50.970 7 198 1.5E-79 T 12-10-2018 N288_02625 e1a8e3d799c63c1e7c361654e5d996fb 558 Gene3D G3DSA:2.160.20.10 109 557 3.0E-122 T 12-10-2018 IPR012334 Pectin lyase fold N288_02625 e1a8e3d799c63c1e7c361654e5d996fb 558 SUPERFAMILY SSF51126 412 550 1.65E-5 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor N288_02625 e1a8e3d799c63c1e7c361654e5d996fb 558 SMART SM00710 455 477 2000.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_02625 e1a8e3d799c63c1e7c361654e5d996fb 558 SMART SM00710 484 506 1600.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_02625 e1a8e3d799c63c1e7c361654e5d996fb 558 SMART SM00710 296 328 42.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_02625 e1a8e3d799c63c1e7c361654e5d996fb 558 SMART SM00710 330 351 950.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_02625 e1a8e3d799c63c1e7c361654e5d996fb 558 SMART SM00710 531 552 5800.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_02625 e1a8e3d799c63c1e7c361654e5d996fb 558 SMART SM00710 273 295 4900.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_02625 e1a8e3d799c63c1e7c361654e5d996fb 558 SMART SM00710 235 257 1500.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_02625 e1a8e3d799c63c1e7c361654e5d996fb 558 SUPERFAMILY SSF51126 112 473 2.51E-38 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor N288_02625 e1a8e3d799c63c1e7c361654e5d996fb 558 Pfam PF12708 Pectate lyase superfamily protein 117 347 8.4E-22 T 12-10-2018 IPR024535 Pectate lyase superfamily protein N288_18300 b79b596bc8760e6358ad3618f0f995a2 436 Gene3D G3DSA:3.40.50.300 219 436 1.9E-46 T 12-10-2018 N288_18300 b79b596bc8760e6358ad3618f0f995a2 436 SMART SM00490 260 341 3.5E-30 T 12-10-2018 IPR001650 Helicase, C-terminal N288_18300 b79b596bc8760e6358ad3618f0f995a2 436 Gene3D G3DSA:3.40.50.300 2 218 3.0E-67 T 12-10-2018 N288_18300 b79b596bc8760e6358ad3618f0f995a2 436 Pfam PF00271 Helicase conserved C-terminal domain 243 341 1.6E-26 T 12-10-2018 IPR001650 Helicase, C-terminal N288_18300 b79b596bc8760e6358ad3618f0f995a2 436 SUPERFAMILY SSF52540 71 361 1.25E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_18300 b79b596bc8760e6358ad3618f0f995a2 436 Hamap MF_01494 DEAD-box ATP-dependent RNA helicase CshB [cshB]. 4 436 50.849 T 12-10-2018 IPR030881 DEAD-box ATP-dependent RNA helicase CshB GO:0004386|GO:0009409 N288_18300 b79b596bc8760e6358ad3618f0f995a2 436 SMART SM00487 23 224 1.5E-50 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_18300 b79b596bc8760e6358ad3618f0f995a2 436 Pfam PF00270 DEAD/DEAH box helicase 28 196 5.8E-42 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 N288_16235 707e864b775d5bea6df2e23fffb9c643 572 Gene3D G3DSA:1.10.287.950 314 571 5.4E-56 T 12-10-2018 N288_16235 707e864b775d5bea6df2e23fffb9c643 572 Pfam PF05227 CHASE3 domain 48 180 1.3E-30 T 12-10-2018 IPR007891 CHASE3 N288_16235 707e864b775d5bea6df2e23fffb9c643 572 Gene3D G3DSA:1.20.1440.210 52 178 3.3E-26 T 12-10-2018 N288_16235 707e864b775d5bea6df2e23fffb9c643 572 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 342 523 1.4E-35 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_16235 707e864b775d5bea6df2e23fffb9c643 572 SUPERFAMILY SSF58104 235 571 1.66E-61 T 12-10-2018 N288_16235 707e864b775d5bea6df2e23fffb9c643 572 SMART SM00283 296 571 3.9E-61 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_25385 b60bb2af2b5eb701c6bff3a746fcc609 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 219 4.9E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_25385 b60bb2af2b5eb701c6bff3a746fcc609 223 Pfam PF00072 Response regulator receiver domain 3 111 7.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_25385 b60bb2af2b5eb701c6bff3a746fcc609 223 SUPERFAMILY SSF52172 1 161 1.21E-40 T 12-10-2018 IPR011006 CheY-like superfamily N288_25385 b60bb2af2b5eb701c6bff3a746fcc609 223 SMART SM00862 143 219 3.3E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_25385 b60bb2af2b5eb701c6bff3a746fcc609 223 Gene3D G3DSA:1.10.10.10 122 221 7.9E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_25385 b60bb2af2b5eb701c6bff3a746fcc609 223 SMART SM00448 1 111 1.9E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_25385 b60bb2af2b5eb701c6bff3a746fcc609 223 Gene3D G3DSA:3.40.50.2300 1 121 6.5E-35 T 12-10-2018 N288_25385 b60bb2af2b5eb701c6bff3a746fcc609 223 SUPERFAMILY SSF46894 125 220 1.51E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_00845 20b5b0a8401cd0596bc7390350151850 216 SUPERFAMILY SSF52540 4 212 2.92E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00845 20b5b0a8401cd0596bc7390350151850 216 Pfam PF00406 Adenylate kinase 5 190 9.8E-64 T 12-10-2018 N288_00845 20b5b0a8401cd0596bc7390350151850 216 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 12-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 N288_00845 20b5b0a8401cd0596bc7390350151850 216 Gene3D G3DSA:3.40.50.300 1 212 2.0E-84 T 12-10-2018 N288_00845 20b5b0a8401cd0596bc7390350151850 216 PRINTS PR00094 Adenylate kinase signature 81 97 6.6E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 N288_00845 20b5b0a8401cd0596bc7390350151850 216 PRINTS PR00094 Adenylate kinase signature 160 175 6.6E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 N288_00845 20b5b0a8401cd0596bc7390350151850 216 PRINTS PR00094 Adenylate kinase signature 177 191 6.6E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 N288_00845 20b5b0a8401cd0596bc7390350151850 216 PRINTS PR00094 Adenylate kinase signature 4 17 6.6E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 N288_00845 20b5b0a8401cd0596bc7390350151850 216 PRINTS PR00094 Adenylate kinase signature 32 46 6.6E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 N288_00845 20b5b0a8401cd0596bc7390350151850 216 Hamap MF_00235 Adenylate kinase [adk]. 1 213 54.089 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 N288_00845 20b5b0a8401cd0596bc7390350151850 216 TIGRFAM TIGR01351 adk: adenylate kinase 2 211 1.2E-82 T 12-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 N288_00845 20b5b0a8401cd0596bc7390350151850 216 Pfam PF05191 Adenylate kinase, active site lid 127 162 4.0E-16 T 12-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 N288_00335 6d8e87585dea0a4f0101b65c55379760 318 SUPERFAMILY SSF53271 75 309 9.87E-66 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like N288_00335 6d8e87585dea0a4f0101b65c55379760 318 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 10 318 51.587 T 12-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 N288_00335 6d8e87585dea0a4f0101b65c55379760 318 SMART SM01400 10 126 9.0E-82 T 12-10-2018 N288_00335 6d8e87585dea0a4f0101b65c55379760 318 Pfam PF14572 Phosphoribosyl synthetase-associated domain 209 317 3.2E-25 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 N288_00335 6d8e87585dea0a4f0101b65c55379760 318 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 134 149 - T 12-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 N288_00335 6d8e87585dea0a4f0101b65c55379760 318 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 11 318 2.6E-129 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 N288_00335 6d8e87585dea0a4f0101b65c55379760 318 Gene3D G3DSA:3.40.50.2020 153 294 1.1E-125 T 12-10-2018 N288_00335 6d8e87585dea0a4f0101b65c55379760 318 Gene3D G3DSA:3.40.50.2020 13 306 1.1E-125 T 12-10-2018 N288_00335 6d8e87585dea0a4f0101b65c55379760 318 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 10 126 1.7E-52 T 12-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 N288_10810 f8eaedae47c83e0930bff5c942d6cceb 260 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 13 260 1.0E-107 T 12-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 N288_10810 f8eaedae47c83e0930bff5c942d6cceb 260 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 18 187 0.0018 T 12-10-2018 N288_10810 f8eaedae47c83e0930bff5c942d6cceb 260 SUPERFAMILY SSF51735 12 259 2.59E-83 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_10810 f8eaedae47c83e0930bff5c942d6cceb 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 1.0E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10810 f8eaedae47c83e0930bff5c942d6cceb 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 1.0E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10810 f8eaedae47c83e0930bff5c942d6cceb 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 1.0E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10810 f8eaedae47c83e0930bff5c942d6cceb 260 Gene3D G3DSA:3.40.50.720 3 258 4.7E-85 T 12-10-2018 N288_10810 f8eaedae47c83e0930bff5c942d6cceb 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_10810 f8eaedae47c83e0930bff5c942d6cceb 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 27 257 1.2E-64 T 12-10-2018 N288_10810 f8eaedae47c83e0930bff5c942d6cceb 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 4.5E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10810 f8eaedae47c83e0930bff5c942d6cceb 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 4.5E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10810 f8eaedae47c83e0930bff5c942d6cceb 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 4.5E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10810 f8eaedae47c83e0930bff5c942d6cceb 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 4.5E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10810 f8eaedae47c83e0930bff5c942d6cceb 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 4.5E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10810 f8eaedae47c83e0930bff5c942d6cceb 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 4.5E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_00740 03cf93328b10ad6eacf73b2622c92060 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 6.6E-20 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00740 03cf93328b10ad6eacf73b2622c92060 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 6.6E-20 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00740 03cf93328b10ad6eacf73b2622c92060 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 6.6E-20 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00740 03cf93328b10ad6eacf73b2622c92060 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 8.9E-47 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00740 03cf93328b10ad6eacf73b2622c92060 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 28.154 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00740 03cf93328b10ad6eacf73b2622c92060 102 Gene3D G3DSA:3.30.70.600 65 102 1.2E-14 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily N288_00740 03cf93328b10ad6eacf73b2622c92060 102 Gene3D G3DSA:3.30.70.600 1 62 4.0E-21 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily N288_00740 03cf93328b10ad6eacf73b2622c92060 102 SMART SM01403 7 101 3.1E-60 T 12-10-2018 IPR027486 Ribosomal protein S10 domain N288_00740 03cf93328b10ad6eacf73b2622c92060 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.1E-36 T 12-10-2018 IPR027486 Ribosomal protein S10 domain N288_00740 03cf93328b10ad6eacf73b2622c92060 102 SUPERFAMILY SSF54999 5 102 1.23E-38 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily N288_00740 03cf93328b10ad6eacf73b2622c92060 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 12-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00430 390fd3a0b52dc794999b440d9840a86a 181 Gene3D G3DSA:3.40.50.2020 1 180 1.1E-67 T 12-10-2018 N288_00430 390fd3a0b52dc794999b440d9840a86a 181 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 173 1.4E-69 T 12-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 N288_00430 390fd3a0b52dc794999b440d9840a86a 181 SUPERFAMILY SSF53271 2 177 1.08E-60 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like N288_00430 390fd3a0b52dc794999b440d9840a86a 181 Pfam PF00156 Phosphoribosyl transferase domain 15 159 6.7E-24 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 N288_03245 4f479afac61b650d14a5d83fe6bc45e2 394 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 221 383 1.4E-34 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 N288_03245 4f479afac61b650d14a5d83fe6bc45e2 394 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 2 385 8.1E-91 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 N288_03245 4f479afac61b650d14a5d83fe6bc45e2 394 Gene3D G3DSA:3.30.300.210 234 387 1.6E-35 T 12-10-2018 IPR038501 Spore germination GerAC superfamily N288_19855 723e1d5ebc8eccc599036816455bcb2d 395 Gene3D G3DSA:3.40.640.10 4 257 1.9E-94 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_19855 723e1d5ebc8eccc599036816455bcb2d 395 SUPERFAMILY SSF53383 27 392 1.9E-119 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_19855 723e1d5ebc8eccc599036816455bcb2d 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 391 4.8E-145 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 N288_19855 723e1d5ebc8eccc599036816455bcb2d 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 201 215 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 N288_19855 723e1d5ebc8eccc599036816455bcb2d 395 PIRSF PIRSF001434 1 395 3.0E-144 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 N288_19855 723e1d5ebc8eccc599036816455bcb2d 395 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 6 392 1.6E-182 T 12-10-2018 IPR006237 L-methionine gamma-lyase GO:0018826 KEGG: 00270+4.4.1.11|KEGG: 00450+4.4.1.11|KEGG: 00920+4.4.1.2|MetaCyc: PWY-7793 N288_19855 723e1d5ebc8eccc599036816455bcb2d 395 Gene3D G3DSA:3.90.1150.10 261 395 2.1E-49 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_10020 fadb7168c528e83dfe849b57e76d7e67 349 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 239 253 - T 12-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 N288_10020 fadb7168c528e83dfe849b57e76d7e67 349 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 8 344 4.9E-161 T 12-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 N288_10020 fadb7168c528e83dfe849b57e76d7e67 349 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 329 2.0E-57 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 N288_10020 fadb7168c528e83dfe849b57e76d7e67 349 Gene3D G3DSA:3.30.360.10 130 326 2.9E-143 T 12-10-2018 N288_10020 fadb7168c528e83dfe849b57e76d7e67 349 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 9 122 9.9E-35 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 N288_10020 fadb7168c528e83dfe849b57e76d7e67 349 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 6 343 37.78 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 N288_10020 fadb7168c528e83dfe849b57e76d7e67 349 SUPERFAMILY SSF55347 131 330 3.13E-75 T 12-10-2018 N288_10020 fadb7168c528e83dfe849b57e76d7e67 349 SUPERFAMILY SSF51735 7 159 6.87E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_10020 fadb7168c528e83dfe849b57e76d7e67 349 PIRSF PIRSF000148 6 348 3.4E-131 T 12-10-2018 N288_10020 fadb7168c528e83dfe849b57e76d7e67 349 SMART SM00859 8 123 8.7E-45 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 N288_10020 fadb7168c528e83dfe849b57e76d7e67 349 Gene3D G3DSA:3.40.50.720 9 340 2.9E-143 T 12-10-2018 N288_22130 2f82b9748d993102ad78f55cc5b3d3c8 327 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 74 220 4.0E-43 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain N288_22130 2f82b9748d993102ad78f55cc5b3d3c8 327 Gene3D G3DSA:1.10.260.150 35 326 1.9E-83 T 12-10-2018 N288_22130 2f82b9748d993102ad78f55cc5b3d3c8 327 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 74 222 4.9E-40 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain N288_20645 0d95c1996064388537d7a3b0047966d3 328 SUPERFAMILY SSF81324 15 134 2.09E-23 T 12-10-2018 N288_20645 0d95c1996064388537d7a3b0047966d3 328 Gene3D G3DSA:3.40.50.720 107 237 5.6E-25 T 12-10-2018 N288_20645 0d95c1996064388537d7a3b0047966d3 328 SUPERFAMILY SSF51735 115 250 4.43E-18 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_20645 0d95c1996064388537d7a3b0047966d3 328 Gene3D G3DSA:1.10.287.70 13 106 3.3E-18 T 12-10-2018 N288_20645 0d95c1996064388537d7a3b0047966d3 328 Pfam PF07885 Ion channel 22 94 2.7E-13 T 12-10-2018 IPR013099 Potassium channel domain N288_20645 0d95c1996064388537d7a3b0047966d3 328 Pfam PF02254 TrkA-N domain 117 237 5.6E-16 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 N288_16920 5d527661232180dfa6f9ce0c9ee3a4cf 238 SUPERFAMILY SSF102588 6 231 5.23E-58 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 N288_16920 5d527661232180dfa6f9ce0c9ee3a4cf 238 TIGRFAM TIGR04001 thiol_BshB1: bacillithiol biosynthesis deacetylase BshB1 5 228 1.2E-95 T 12-10-2018 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 GO:0019213|GO:0071793 N288_16920 5d527661232180dfa6f9ce0c9ee3a4cf 238 Pfam PF02585 GlcNAc-PI de-N-acetylase 9 125 3.8E-22 T 12-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 N288_16920 5d527661232180dfa6f9ce0c9ee3a4cf 238 Gene3D G3DSA:3.40.50.10320 4 238 9.8E-89 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 N288_00595 7e87187ce343fb91b8f752413ec48132 355 SUPERFAMILY SSF55931 4 269 2.13E-87 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 N288_00595 7e87187ce343fb91b8f752413ec48132 355 Gene3D G3DSA:3.30.590.10 10 265 3.1E-73 T 12-10-2018 N288_00595 7e87187ce343fb91b8f752413ec48132 355 ProSitePatterns PS00112 Phosphagen kinase active site signature. 168 174 - T 12-10-2018 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: R-HSA-71288 N288_00595 7e87187ce343fb91b8f752413ec48132 355 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 67 253 4.6E-75 T 12-10-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 N288_00595 7e87187ce343fb91b8f752413ec48132 355 Hamap MF_00602 Protein-arginine kinase [mcsB]. 13 351 39.727 T 12-10-2018 IPR023660 Protein arginine kinase GO:0016775 N288_00095 490c1b4fd7d9d33d9320bc378b78dd83 195 PIRSF PIRSF005639 1 191 1.3E-73 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 N288_00095 490c1b4fd7d9d33d9320bc378b78dd83 195 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 3 185 1.7E-82 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 N288_00095 490c1b4fd7d9d33d9320bc378b78dd83 195 SUPERFAMILY SSF52317 2 189 2.01E-50 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_00095 490c1b4fd7d9d33d9320bc378b78dd83 195 Pfam PF01174 SNO glutamine amidotransferase family 6 188 1.2E-75 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 N288_00095 490c1b4fd7d9d33d9320bc378b78dd83 195 Gene3D G3DSA:3.40.50.880 1 195 2.4E-71 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_00095 490c1b4fd7d9d33d9320bc378b78dd83 195 ProSitePatterns PS01236 PdxT/SNO family family signature. 41 51 - T 12-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 N288_00095 490c1b4fd7d9d33d9320bc378b78dd83 195 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 4 186 37.399 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 N288_21435 df0078f5df58ef7ed659ab029549d5a4 159 Pfam PF13686 DsrE/DsrF/DrsH-like family 4 158 1.1E-68 T 12-10-2018 IPR032836 DsrE2-like family N288_21435 df0078f5df58ef7ed659ab029549d5a4 159 Gene3D G3DSA:3.40.1260.10 1 159 4.2E-67 T 12-10-2018 IPR027396 DsrEFH-like N288_21435 df0078f5df58ef7ed659ab029549d5a4 159 SUPERFAMILY SSF75169 5 157 1.57E-22 T 12-10-2018 IPR027396 DsrEFH-like N288_14660 c2700e3654ae93d1bcb64501db35a281 277 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 51 62 7.4E-14 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 N288_14660 c2700e3654ae93d1bcb64501db35a281 277 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 93 107 7.4E-14 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 N288_14660 c2700e3654ae93d1bcb64501db35a281 277 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 24 32 7.4E-14 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 N288_14660 c2700e3654ae93d1bcb64501db35a281 277 Gene3D G3DSA:3.40.50.1820 2 274 4.0E-47 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_14660 c2700e3654ae93d1bcb64501db35a281 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 1.7E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_14660 c2700e3654ae93d1bcb64501db35a281 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 1.7E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_14660 c2700e3654ae93d1bcb64501db35a281 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 1.7E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_14660 c2700e3654ae93d1bcb64501db35a281 277 Pfam PF00561 alpha/beta hydrolase fold 23 260 2.3E-23 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_14660 c2700e3654ae93d1bcb64501db35a281 277 SUPERFAMILY SSF53474 6 273 1.08E-46 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_24070 6063eb1f7d33a5fe658269a71052f05a 123 Pfam PF04241 Protein of unknown function (DUF423) 18 105 8.5E-33 T 12-10-2018 IPR006696 Protein of unknown function DUF423 N288_22120 f50895b6f3b94a32b14218a5761cc048 380 Gene3D G3DSA:3.30.565.10 246 380 1.1E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_22120 f50895b6f3b94a32b14218a5761cc048 380 SUPERFAMILY SSF55874 257 377 2.36E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_22120 f50895b6f3b94a32b14218a5761cc048 380 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 289 378 6.9E-10 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_22120 f50895b6f3b94a32b14218a5761cc048 380 Pfam PF05384 Sensor protein DegS 12 170 1.9E-58 T 12-10-2018 IPR008595 Sensor DegS GO:0007165|GO:0016301 N288_22120 f50895b6f3b94a32b14218a5761cc048 380 Pfam PF07730 Histidine kinase 180 248 5.1E-16 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 N288_22120 f50895b6f3b94a32b14218a5761cc048 380 SMART SM00387 287 380 4.0E-10 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_22120 f50895b6f3b94a32b14218a5761cc048 380 PIRSF PIRSF003169 1 380 2.4E-159 T 12-10-2018 IPR016381 Signal transduction histidine kinase, DegS GO:0000155|GO:0000160|GO:0004673 N288_23885 dbdbeffd0d0d54f12d8404c076223b7f 215 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 N288_23885 dbdbeffd0d0d54f12d8404c076223b7f 215 SUPERFAMILY SSF51569 1 212 3.87E-78 T 12-10-2018 N288_23885 dbdbeffd0d0d54f12d8404c076223b7f 215 ProSitePatterns PS00958 Transaldolase active site. 81 98 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 N288_23885 dbdbeffd0d0d54f12d8404c076223b7f 215 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 3.4E-105 T 12-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 N288_23885 dbdbeffd0d0d54f12d8404c076223b7f 215 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 203 2.1E-59 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 N288_23885 dbdbeffd0d0d54f12d8404c076223b7f 215 Hamap MF_00494 Probable transaldolase [tal]. 1 215 47.343 T 12-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 N288_23885 dbdbeffd0d0d54f12d8404c076223b7f 215 Gene3D G3DSA:3.20.20.70 1 212 9.3E-93 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_12680 e42ae0a3140690f9bb82eb62a5eabe9a 504 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 29 479 1.6E-170 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 N288_12680 e42ae0a3140690f9bb82eb62a5eabe9a 504 PIRSF PIRSF005690 19 494 6.1E-171 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 N288_19345 7e8f542016f44e36d83b3772d8815054 154 Pfam PF03061 Thioesterase superfamily 33 118 3.0E-16 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 N288_19345 7e8f542016f44e36d83b3772d8815054 154 SUPERFAMILY SSF54637 14 148 7.82E-36 T 12-10-2018 IPR029069 HotDog domain superfamily N288_19345 7e8f542016f44e36d83b3772d8815054 154 Gene3D G3DSA:3.10.129.10 6 149 2.6E-35 T 12-10-2018 N288_25300 8d427666b23f853467777f657d40bc40 312 Gene3D G3DSA:3.10.180.10 67 210 1.8E-122 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_25300 8d427666b23f853467777f657d40bc40 312 SUPERFAMILY SSF54593 5 280 1.52E-48 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_25300 8d427666b23f853467777f657d40bc40 312 Gene3D G3DSA:3.10.180.10 7 303 1.8E-122 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_25300 8d427666b23f853467777f657d40bc40 312 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 156 266 1.3E-16 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_25300 8d427666b23f853467777f657d40bc40 312 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 106 3.0E-18 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_21395 117f99a20c0a6b251b79014aae602db8 210 SUPERFAMILY SSF51366 3 209 1.97E-43 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 N288_21395 117f99a20c0a6b251b79014aae602db8 210 SMART SM00934 2 203 2.2E-40 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_21395 117f99a20c0a6b251b79014aae602db8 210 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 2 202 5.9E-29 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_21395 117f99a20c0a6b251b79014aae602db8 210 TIGRFAM TIGR03128 RuMP_HxlA: 3-hexulose-6-phosphate synthase 2 207 2.6E-85 T 12-10-2018 IPR017553 3-hexulose-6-phosphate synthase GO:0005975|GO:0043801 KEGG: 00030+4.1.2.43|KEGG: 00680+4.1.2.43|MetaCyc: PWY-1861|MetaCyc: PWY-7796 N288_21395 117f99a20c0a6b251b79014aae602db8 210 Gene3D G3DSA:3.20.20.70 1 210 4.7E-75 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_06845 6497bb35298c774a5a35f8c8c7b149f8 173 Pfam PF17099 Tryptophan transporter TrpP 2 162 5.6E-55 T 12-10-2018 IPR031360 Tryptophan transporter TrpP N288_06845 6497bb35298c774a5a35f8c8c7b149f8 173 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 168 2.0E-45 T 12-10-2018 N288_01500 6a03c46594d96162f8a4d1e9b9cbd02c 124 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 20 115 3.0E-27 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 N288_01500 6a03c46594d96162f8a4d1e9b9cbd02c 124 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 4 116 1.2E-30 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 N288_01500 6a03c46594d96162f8a4d1e9b9cbd02c 124 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 4 116 6.5E-39 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 N288_01500 6a03c46594d96162f8a4d1e9b9cbd02c 124 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 6 112 3.4E-21 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 N288_01500 6a03c46594d96162f8a4d1e9b9cbd02c 124 Gene3D G3DSA:3.90.470.20 3 117 2.3E-35 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 N288_01500 6a03c46594d96162f8a4d1e9b9cbd02c 124 SUPERFAMILY SSF56214 4 115 1.44E-31 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 N288_01500 6a03c46594d96162f8a4d1e9b9cbd02c 124 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 5 117 24.61 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 N288_20020 96e0112e2d9b813c814702e16bbfbf86 212 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 26 209 2.6E-59 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 N288_20020 96e0112e2d9b813c814702e16bbfbf86 212 SUPERFAMILY SSF53335 16 209 2.46E-30 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_20020 96e0112e2d9b813c814702e16bbfbf86 212 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 212 29.504 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 N288_20020 96e0112e2d9b813c814702e16bbfbf86 212 Pfam PF02390 Putative methyltransferase 38 206 3.3E-47 T 12-10-2018 N288_20020 96e0112e2d9b813c814702e16bbfbf86 212 Gene3D G3DSA:3.40.50.150 1 211 8.2E-71 T 12-10-2018 N288_22270 3e8eb237b8068e9034676fcfe62f7f35 692 SUPERFAMILY SSF51445 134 524 4.63E-106 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_22270 3e8eb237b8068e9034676fcfe62f7f35 692 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 525 692 2.5E-10 T 12-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 N288_22270 3e8eb237b8068e9034676fcfe62f7f35 692 Gene3D G3DSA:3.20.20.300 132 509 6.5E-148 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 N288_22270 3e8eb237b8068e9034676fcfe62f7f35 692 Gene3D G3DSA:2.60.40.1080 35 122 2.5E-9 T 12-10-2018 N288_22270 3e8eb237b8068e9034676fcfe62f7f35 692 SUPERFAMILY SSF52279 525 692 1.7E-16 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 N288_22270 3e8eb237b8068e9034676fcfe62f7f35 692 Gene3D G3DSA:3.40.50.1700 510 692 1.4E-39 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 N288_22270 3e8eb237b8068e9034676fcfe62f7f35 692 SUPERFAMILY SSF49373 65 112 2.51E-8 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments N288_22270 3e8eb237b8068e9034676fcfe62f7f35 692 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 149 482 3.0E-110 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 N288_22270 3e8eb237b8068e9034676fcfe62f7f35 692 Pfam PF02368 Bacterial Ig-like domain (group 2) 51 112 8.5E-6 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 N288_01725 f78cd11f47469ac17651abd6c8d95e74 581 Pfam PF13382 Adenine deaminase C-terminal domain 411 572 3.5E-36 T 12-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 N288_01725 f78cd11f47469ac17651abd6c8d95e74 581 SUPERFAMILY SSF51556 82 327 3.91E-9 T 12-10-2018 IPR032466 Metal-dependent hydrolase N288_01725 f78cd11f47469ac17651abd6c8d95e74 581 Pfam PF01979 Amidohydrolase family 79 362 8.1E-26 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 N288_01725 f78cd11f47469ac17651abd6c8d95e74 581 Gene3D G3DSA:2.30.40.10 21 362 4.2E-83 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_01725 f78cd11f47469ac17651abd6c8d95e74 581 Gene3D G3DSA:3.20.20.140 82 325 4.2E-83 T 12-10-2018 N288_01725 f78cd11f47469ac17651abd6c8d95e74 581 SUPERFAMILY SSF51338 25 368 9.55E-14 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_21000 3aff1e375f2852dba7ed90c73a1a08bd 168 SUPERFAMILY SSF101307 14 163 1.27E-55 T 12-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 N288_21000 3aff1e375f2852dba7ed90c73a1a08bd 168 Gene3D G3DSA:1.10.3760.10 3 168 1.8E-74 T 12-10-2018 N288_21000 3aff1e375f2852dba7ed90c73a1a08bd 168 PIRSF PIRSF019587 7 168 4.5E-77 T 12-10-2018 IPR026038 Putative phosphatidylglycerophosphatase N288_21000 3aff1e375f2852dba7ed90c73a1a08bd 168 Pfam PF04608 Phosphatidylglycerophosphatase A 25 161 2.5E-20 T 12-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 N288_21010 7ba24e97e87a9457fa8c7b9285e7ab39 292 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 183 204 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 N288_21010 7ba24e97e87a9457fa8c7b9285e7ab39 292 Pfam PF13624 SurA N-terminal domain 7 128 4.9E-7 T 12-10-2018 N288_21010 7ba24e97e87a9457fa8c7b9285e7ab39 292 SUPERFAMILY SSF54534 147 244 9.16E-33 T 12-10-2018 N288_21010 7ba24e97e87a9457fa8c7b9285e7ab39 292 Gene3D G3DSA:3.10.50.40 155 246 1.1E-49 T 12-10-2018 N288_21010 7ba24e97e87a9457fa8c7b9285e7ab39 292 SUPERFAMILY SSF109998 32 184 4.84E-25 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily N288_21010 7ba24e97e87a9457fa8c7b9285e7ab39 292 Pfam PF13616 PPIC-type PPIASE domain 148 246 4.7E-29 T 12-10-2018 N288_21010 7ba24e97e87a9457fa8c7b9285e7ab39 292 Gene3D G3DSA:1.10.4030.30 52 256 1.1E-49 T 12-10-2018 N288_21010 7ba24e97e87a9457fa8c7b9285e7ab39 292 Hamap MF_01145 Foldase protein PrsA [prsA]. 4 292 15.622 T 12-10-2018 IPR023059 Foldase protein PrsA GO:0003755 N288_05495 9de2086dc6afca528ab51284594cb825 136 Gene3D G3DSA:3.30.70.920 53 136 1.1E-14 T 12-10-2018 N288_05495 9de2086dc6afca528ab51284594cb825 136 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 8.6E-14 T 12-10-2018 N288_05495 9de2086dc6afca528ab51284594cb825 136 Gene3D G3DSA:1.10.10.10 1 52 2.4E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_05495 9de2086dc6afca528ab51284594cb825 136 Pfam PF01037 Lrp/AsnC ligand binding domain 88 135 6.5E-8 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain N288_05495 9de2086dc6afca528ab51284594cb825 136 SMART SM00344 2 109 6.3E-26 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 N288_05495 9de2086dc6afca528ab51284594cb825 136 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 2.5E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 N288_05495 9de2086dc6afca528ab51284594cb825 136 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 2.5E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 N288_05495 9de2086dc6afca528ab51284594cb825 136 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 2.5E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 N288_05495 9de2086dc6afca528ab51284594cb825 136 SUPERFAMILY SSF54909 63 135 2.41E-8 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel N288_05495 9de2086dc6afca528ab51284594cb825 136 SUPERFAMILY SSF46785 1 62 2.6E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_16395 7127247e783058435cfc800dc531cac3 271 Gene3D G3DSA:3.40.50.1000 1 131 3.4E-16 T 12-10-2018 IPR023214 HAD superfamily N288_16395 7127247e783058435cfc800dc531cac3 271 SUPERFAMILY SSF56784 3 224 2.78E-15 T 12-10-2018 IPR036412 HAD-like superfamily N288_16395 7127247e783058435cfc800dc531cac3 271 PIRSF PIRSF030802 1 237 6.1E-24 T 12-10-2018 IPR024197 Uncharacterised conserved protein UCP030802 N288_08175 9c1d5c588c2488a1847fcb4617f83851 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 310 1.6E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_08175 9c1d5c588c2488a1847fcb4617f83851 326 Gene3D G3DSA:1.10.3720.10 75 319 2.9E-71 T 12-10-2018 IPR035906 MetI-like superfamily N288_08175 9c1d5c588c2488a1847fcb4617f83851 326 SUPERFAMILY SSF161098 79 309 2.35E-59 T 12-10-2018 IPR035906 MetI-like superfamily N288_17455 f231473fdf5b77952335760bfbcff732 393 Gene3D G3DSA:3.30.70.1250 101 219 3.4E-175 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 N288_17455 f231473fdf5b77952335760bfbcff732 393 Gene3D G3DSA:3.40.720.10 7 390 3.4E-175 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 N288_17455 f231473fdf5b77952335760bfbcff732 393 SUPERFAMILY SSF143856 103 219 1.31E-51 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 N288_17455 f231473fdf5b77952335760bfbcff732 393 SUPERFAMILY SSF53649 5 393 7.74E-78 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 N288_17455 f231473fdf5b77952335760bfbcff732 393 Hamap MF_00740 Phosphopentomutase [deoB]. 6 390 56.027 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 N288_17455 f231473fdf5b77952335760bfbcff732 393 Pfam PF01676 Metalloenzyme superfamily 7 380 1.1E-44 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 N288_17455 f231473fdf5b77952335760bfbcff732 393 PIRSF PIRSF001491 5 393 1.8E-167 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 N288_17455 f231473fdf5b77952335760bfbcff732 393 TIGRFAM TIGR01696 deoB: phosphopentomutase 8 388 1.7E-205 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 N288_08380 27affd775e9bc91e0a42b858fbb73d45 395 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 395 178.043 T 12-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 N288_08380 27affd775e9bc91e0a42b858fbb73d45 395 Gene3D G3DSA:3.30.200.20 2 118 1.4E-44 T 12-10-2018 N288_08380 27affd775e9bc91e0a42b858fbb73d45 395 Pfam PF01636 Phosphotransferase enzyme family 35 268 3.0E-15 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase N288_08380 27affd775e9bc91e0a42b858fbb73d45 395 PIRSF PIRSF031134 4 394 9.1E-152 T 12-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 N288_08380 27affd775e9bc91e0a42b858fbb73d45 395 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 36 392 1.6E-141 T 12-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 N288_08380 27affd775e9bc91e0a42b858fbb73d45 395 SUPERFAMILY SSF56112 5 388 1.09E-87 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_08380 27affd775e9bc91e0a42b858fbb73d45 395 Gene3D G3DSA:3.90.1200.10 119 394 1.7E-105 T 12-10-2018 N288_07320 b8dfd79f9ba3a5a313bd7f92a7749354 188 Pfam PF10949 Protein of unknown function (DUF2777) 4 183 1.1E-75 T 12-10-2018 IPR024488 Protein of unknown function DUF2777 N288_07320 b8dfd79f9ba3a5a313bd7f92a7749354 188 ProDom PD106196 YISN IG BH1722 5 178 7.0E-32 T 12-10-2018 IPR024488 Protein of unknown function DUF2777 N288_17265 8862bfea5c71952d3f06823e24f732e9 445 Pfam PF00209 Sodium:neurotransmitter symporter family 4 123 2.7E-22 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 N288_17265 8862bfea5c71952d3f06823e24f732e9 445 Pfam PF00209 Sodium:neurotransmitter symporter family 148 438 1.7E-26 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 N288_17265 8862bfea5c71952d3f06823e24f732e9 445 SUPERFAMILY SSF161070 4 440 3.4E-127 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 N288_17265 8862bfea5c71952d3f06823e24f732e9 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 9.6E-14 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 N288_17265 8862bfea5c71952d3f06823e24f732e9 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 86 112 9.6E-14 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 N288_17265 8862bfea5c71952d3f06823e24f732e9 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 9.6E-14 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 N288_05205 8f2b9056f54802d0b9982358fb96688b 391 SUPERFAMILY SSF53187 6 390 1.68E-82 T 12-10-2018 N288_05205 8f2b9056f54802d0b9982358fb96688b 391 Gene3D G3DSA:3.30.70.360 183 297 6.5E-136 T 12-10-2018 N288_05205 8f2b9056f54802d0b9982358fb96688b 391 Gene3D G3DSA:3.40.630.10 17 374 6.5E-136 T 12-10-2018 N288_05205 8f2b9056f54802d0b9982358fb96688b 391 PIRSF PIRSF005962 1 391 1.4E-125 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 N288_05205 8f2b9056f54802d0b9982358fb96688b 391 SUPERFAMILY SSF55031 186 296 1.09E-28 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_05205 8f2b9056f54802d0b9982358fb96688b 391 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 377 4.2E-113 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 N288_05205 8f2b9056f54802d0b9982358fb96688b 391 Pfam PF01546 Peptidase family M20/M25/M40 74 385 8.3E-35 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_05205 8f2b9056f54802d0b9982358fb96688b 391 Pfam PF07687 Peptidase dimerisation domain 188 277 1.0E-6 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain N288_05360 e85978cb9b2199102ac33977be057a41 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 8.3E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_05360 e85978cb9b2199102ac33977be057a41 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 8.3E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_05360 e85978cb9b2199102ac33977be057a41 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 8.3E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_05360 e85978cb9b2199102ac33977be057a41 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 8.3E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_05360 e85978cb9b2199102ac33977be057a41 143 Gene3D G3DSA:1.10.10.10 6 139 3.9E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_05360 e85978cb9b2199102ac33977be057a41 143 SUPERFAMILY SSF46785 17 136 4.12E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_05360 e85978cb9b2199102ac33977be057a41 143 SMART SM00347 23 124 1.9E-19 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_05360 e85978cb9b2199102ac33977be057a41 143 Pfam PF01047 MarR family 33 88 2.3E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_09190 61f35ecbaddb919b7ff7fc3a84f9d95b 450 Pfam PF08245 Mur ligase middle domain 117 291 6.4E-33 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 N288_09190 61f35ecbaddb919b7ff7fc3a84f9d95b 450 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 379 1.1E-8 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 N288_09190 61f35ecbaddb919b7ff7fc3a84f9d95b 450 Gene3D G3DSA:3.90.190.20 315 448 2.3E-39 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 N288_09190 61f35ecbaddb919b7ff7fc3a84f9d95b 450 SUPERFAMILY SSF53623 103 308 3.01E-50 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 N288_09190 61f35ecbaddb919b7ff7fc3a84f9d95b 450 SUPERFAMILY SSF51984 10 100 7.32E-19 T 12-10-2018 N288_09190 61f35ecbaddb919b7ff7fc3a84f9d95b 450 Gene3D G3DSA:3.40.50.720 10 95 2.2E-32 T 12-10-2018 N288_09190 61f35ecbaddb919b7ff7fc3a84f9d95b 450 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 447 2.0E-131 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 N288_09190 61f35ecbaddb919b7ff7fc3a84f9d95b 450 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 449 35.736 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 N288_09190 61f35ecbaddb919b7ff7fc3a84f9d95b 450 SUPERFAMILY SSF53244 310 449 4.58E-40 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 N288_09190 61f35ecbaddb919b7ff7fc3a84f9d95b 450 Gene3D G3DSA:3.40.1190.10 102 308 4.6E-64 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 N288_00250 c2c62742b27c1d75234f94911bd8193a 94 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 1.8E-11 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 N288_00250 c2c62742b27c1d75234f94911bd8193a 94 SMART SM00966 8 51 6.1E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 N288_00250 c2c62742b27c1d75234f94911bd8193a 94 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 8.2E-11 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 N288_00250 c2c62742b27c1d75234f94911bd8193a 94 Gene3D G3DSA:2.10.260.10 1 51 2.3E-26 T 12-10-2018 N288_00250 c2c62742b27c1d75234f94911bd8193a 94 SUPERFAMILY SSF89447 1 52 1.29E-16 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily N288_16360 bb4b16ceb15a7fc1c4ce935364f50633 404 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 4 398 4.7E-170 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 N288_16360 bb4b16ceb15a7fc1c4ce935364f50633 404 SUPERFAMILY SSF55681 11 293 1.91E-94 T 12-10-2018 N288_16360 bb4b16ceb15a7fc1c4ce935364f50633 404 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 91 296 3.3E-42 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_16360 bb4b16ceb15a7fc1c4ce935364f50633 404 PRINTS PR01047 Threonyl-tRNA synthetase signature 130 153 5.8E-54 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 N288_16360 bb4b16ceb15a7fc1c4ce935364f50633 404 PRINTS PR01047 Threonyl-tRNA synthetase signature 97 125 5.8E-54 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 N288_16360 bb4b16ceb15a7fc1c4ce935364f50633 404 PRINTS PR01047 Threonyl-tRNA synthetase signature 301 313 5.8E-54 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 N288_16360 bb4b16ceb15a7fc1c4ce935364f50633 404 PRINTS PR01047 Threonyl-tRNA synthetase signature 231 259 5.8E-54 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 N288_16360 bb4b16ceb15a7fc1c4ce935364f50633 404 PRINTS PR01047 Threonyl-tRNA synthetase signature 274 287 5.8E-54 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 N288_16360 bb4b16ceb15a7fc1c4ce935364f50633 404 SUPERFAMILY SSF52954 294 397 2.72E-27 T 12-10-2018 N288_16360 bb4b16ceb15a7fc1c4ce935364f50633 404 Gene3D G3DSA:3.30.930.10 1 298 1.2E-126 T 12-10-2018 N288_16360 bb4b16ceb15a7fc1c4ce935364f50633 404 Pfam PF03129 Anticodon binding domain 308 397 2.8E-20 T 12-10-2018 IPR004154 Anticodon-binding N288_16360 bb4b16ceb15a7fc1c4ce935364f50633 404 Gene3D G3DSA:3.40.50.800 299 401 3.1E-31 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily N288_23300 99e1fdcacf1d3e1d7669847f44723072 406 Pfam PF04932 O-Antigen ligase 198 347 3.3E-18 T 12-10-2018 IPR007016 O-antigen ligase-related N288_07145 7177938017d456cbe3af51588b7133d1 255 Gene3D G3DSA:3.40.50.300 1 249 3.5E-62 T 12-10-2018 N288_07145 7177938017d456cbe3af51588b7133d1 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 247 8.4E-7 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal N288_07145 7177938017d456cbe3af51588b7133d1 255 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_07145 7177938017d456cbe3af51588b7133d1 255 SMART SM00382 29 225 2.2E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_07145 7177938017d456cbe3af51588b7133d1 255 SUPERFAMILY SSF52540 3 246 1.41E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_07145 7177938017d456cbe3af51588b7133d1 255 Pfam PF00005 ABC transporter 21 176 1.2E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_17740 b71a75e41aeec08d4ae8536037e9f0f5 368 SUPERFAMILY SSF53067 120 351 2.7E-55 T 12-10-2018 N288_17740 b71a75e41aeec08d4ae8536037e9f0f5 368 Pfam PF00871 Acetokinase family 8 338 1.9E-73 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_17740 b71a75e41aeec08d4ae8536037e9f0f5 368 SUPERFAMILY SSF53067 6 175 6.83E-72 T 12-10-2018 N288_17740 b71a75e41aeec08d4ae8536037e9f0f5 368 Gene3D G3DSA:3.30.420.40 140 335 3.9E-157 T 12-10-2018 N288_17740 b71a75e41aeec08d4ae8536037e9f0f5 368 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 7 357 7.4E-172 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 N288_17740 b71a75e41aeec08d4ae8536037e9f0f5 368 Hamap MF_00542 Probable butyrate kinase [buk]. 1 368 167.22 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 N288_17740 b71a75e41aeec08d4ae8536037e9f0f5 368 PRINTS PR00471 Acetate kinase family signature 182 203 4.2E-16 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_17740 b71a75e41aeec08d4ae8536037e9f0f5 368 PRINTS PR00471 Acetate kinase family signature 8 19 4.2E-16 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_17740 b71a75e41aeec08d4ae8536037e9f0f5 368 PRINTS PR00471 Acetate kinase family signature 300 316 4.2E-16 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_17740 b71a75e41aeec08d4ae8536037e9f0f5 368 PRINTS PR00471 Acetate kinase family signature 277 290 4.2E-16 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_17740 b71a75e41aeec08d4ae8536037e9f0f5 368 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 182 199 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_17740 b71a75e41aeec08d4ae8536037e9f0f5 368 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 8 19 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_17740 b71a75e41aeec08d4ae8536037e9f0f5 368 Gene3D G3DSA:3.30.420.40 7 358 3.9E-157 T 12-10-2018 N288_17740 b71a75e41aeec08d4ae8536037e9f0f5 368 PIRSF PIRSF036458 4 359 4.3E-173 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 N288_18775 84b54400dc9425a1bb8fdfa7f9725eed 370 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 8 357 41.81 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 N288_18775 84b54400dc9425a1bb8fdfa7f9725eed 370 Gene3D G3DSA:3.40.50.620 1 212 1.0E-98 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_18775 84b54400dc9425a1bb8fdfa7f9725eed 370 Gene3D G3DSA:2.30.30.280 214 278 1.3E-25 T 12-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 N288_18775 84b54400dc9425a1bb8fdfa7f9725eed 370 Gene3D G3DSA:2.40.30.10 279 369 1.4E-28 T 12-10-2018 N288_18775 84b54400dc9425a1bb8fdfa7f9725eed 370 SUPERFAMILY SSF52402 6 244 3.31E-60 T 12-10-2018 N288_18775 84b54400dc9425a1bb8fdfa7f9725eed 370 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 9 356 1.8E-142 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 N288_18775 84b54400dc9425a1bb8fdfa7f9725eed 370 Pfam PF03054 tRNA methyl transferase 9 356 1.8E-150 T 12-10-2018 N288_23365 133a93a24b7b8fdb25210cb4a1346f22 365 Gene3D G3DSA:3.40.50.2000 167 349 3.6E-72 T 12-10-2018 N288_23365 133a93a24b7b8fdb25210cb4a1346f22 365 Gene3D G3DSA:3.40.50.2000 13 359 3.6E-72 T 12-10-2018 N288_23365 133a93a24b7b8fdb25210cb4a1346f22 365 Pfam PF00534 Glycosyl transferases group 1 180 336 1.6E-33 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 N288_23365 133a93a24b7b8fdb25210cb4a1346f22 365 SUPERFAMILY SSF53756 3 365 2.32E-77 T 12-10-2018 N288_23365 133a93a24b7b8fdb25210cb4a1346f22 365 Pfam PF13439 Glycosyltransferase Family 4 13 170 5.2E-19 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 N288_17190 1a70ae6f53ec18dcb3e2813493e5890a 260 Gene3D G3DSA:3.60.21.10 48 235 5.7E-19 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_17190 1a70ae6f53ec18dcb3e2813493e5890a 260 SUPERFAMILY SSF56300 48 255 2.75E-27 T 12-10-2018 N288_17190 1a70ae6f53ec18dcb3e2813493e5890a 260 Pfam PF00149 Calcineurin-like phosphoesterase 50 205 4.1E-10 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 N288_24730 a9e9ff77092af34e67fc7883663476b9 181 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 150 1.0E-29 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ N288_03120 e76aae5e9c95c5d65070a6c9cc1e7c6c 164 SUPERFAMILY SSF46785 8 69 3.28E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_03120 e76aae5e9c95c5d65070a6c9cc1e7c6c 164 Gene3D G3DSA:1.10.10.10 2 61 1.0E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_03120 e76aae5e9c95c5d65070a6c9cc1e7c6c 164 Gene3D G3DSA:3.30.70.920 62 152 6.4E-21 T 12-10-2018 N288_03120 e76aae5e9c95c5d65070a6c9cc1e7c6c 164 SUPERFAMILY SSF54909 69 156 4.02E-17 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel N288_03120 e76aae5e9c95c5d65070a6c9cc1e7c6c 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 9 56 1.2E-17 T 12-10-2018 N288_03120 e76aae5e9c95c5d65070a6c9cc1e7c6c 164 Pfam PF01037 Lrp/AsnC ligand binding domain 76 147 2.4E-16 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain N288_03120 e76aae5e9c95c5d65070a6c9cc1e7c6c 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 3.7E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 N288_03120 e76aae5e9c95c5d65070a6c9cc1e7c6c 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 3.7E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 N288_03120 e76aae5e9c95c5d65070a6c9cc1e7c6c 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 3.7E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 N288_03120 e76aae5e9c95c5d65070a6c9cc1e7c6c 164 SMART SM00344 9 118 1.6E-43 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 N288_05320 8ca7a2a6bf0817d298adc80277a81455 475 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 313 324 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site N288_05320 8ca7a2a6bf0817d298adc80277a81455 475 SUPERFAMILY SSF46548 283 393 1.64E-16 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 N288_05320 8ca7a2a6bf0817d298adc80277a81455 475 Pfam PF02589 LUD domain 70 295 3.6E-57 T 12-10-2018 IPR003741 LUD domain N288_05320 8ca7a2a6bf0817d298adc80277a81455 475 SUPERFAMILY SSF100950 64 296 3.35E-40 T 12-10-2018 IPR037171 NagB/RpiA transferase-like N288_05320 8ca7a2a6bf0817d298adc80277a81455 475 Pfam PF11870 Domain of unknown function (DUF3390) 384 471 6.7E-22 T 12-10-2018 IPR024569 4Fe-4S binding protein, C-terminal N288_05320 8ca7a2a6bf0817d298adc80277a81455 475 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 18 455 9.1E-207 T 12-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 N288_05320 8ca7a2a6bf0817d298adc80277a81455 475 Pfam PF13183 4Fe-4S dicluster domain 311 377 2.3E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain N288_05320 8ca7a2a6bf0817d298adc80277a81455 475 Hamap MF_02103 Lactate utilization protein B [lutB]. 1 475 68.453 T 12-10-2018 IPR022825 Lactate utilization protein B N288_05320 8ca7a2a6bf0817d298adc80277a81455 475 Gene3D G3DSA:3.40.50.10420 122 295 9.2E-15 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily N288_01860 f6363d860f0db3b542418d311718b3f1 264 SUPERFAMILY SSF53335 16 256 1.39E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_01860 f6363d860f0db3b542418d311718b3f1 264 Gene3D G3DSA:3.40.50.150 7 252 2.1E-33 T 12-10-2018 N288_01860 f6363d860f0db3b542418d311718b3f1 264 Pfam PF08241 Methyltransferase domain 41 135 5.2E-17 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 N288_19405 ab61a85f5e8c4f4b0d84b67373ce652b 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 256 1.7E-62 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 N288_19405 ab61a85f5e8c4f4b0d84b67373ce652b 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 N288_19405 ab61a85f5e8c4f4b0d84b67373ce652b 257 Gene3D G3DSA:3.90.226.10 1 257 3.3E-91 T 12-10-2018 N288_19405 ab61a85f5e8c4f4b0d84b67373ce652b 257 SUPERFAMILY SSF52096 1 256 5.91E-82 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_18385 c43b07b33b7578f34f3608862f1fa98a 47 Pfam PF14006 YqzL-like protein 3 46 3.7E-23 T 12-10-2018 IPR025617 YqzL-like protein N288_03680 2783606e6dd82935b8a4d71eddd2f5c4 110 SUPERFAMILY SSF47413 4 70 1.52E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_03680 2783606e6dd82935b8a4d71eddd2f5c4 110 Pfam PF01381 Helix-turn-helix 9 63 2.8E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_03680 2783606e6dd82935b8a4d71eddd2f5c4 110 Pfam PF08671 Anti-repressor SinI 74 101 3.3E-15 T 12-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 N288_03680 2783606e6dd82935b8a4d71eddd2f5c4 110 SUPERFAMILY SSF47406 74 107 1.44E-14 T 12-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 N288_03680 2783606e6dd82935b8a4d71eddd2f5c4 110 SMART SM00530 8 64 3.1E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_03680 2783606e6dd82935b8a4d71eddd2f5c4 110 Gene3D G3DSA:1.10.260.40 4 110 3.4E-29 T 12-10-2018 N288_06730 5984b1fd36ea1757d1d324b1e650c8bf 299 Gene3D G3DSA:3.40.50.300 1 231 1.6E-60 T 12-10-2018 N288_06730 5984b1fd36ea1757d1d324b1e650c8bf 299 SUPERFAMILY SSF52540 2 224 2.78E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_06730 5984b1fd36ea1757d1d324b1e650c8bf 299 SMART SM00382 27 240 1.6E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_06730 5984b1fd36ea1757d1d324b1e650c8bf 299 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_06730 5984b1fd36ea1757d1d324b1e650c8bf 299 Pfam PF13732 Domain of unknown function (DUF4162) 212 294 2.3E-19 T 12-10-2018 IPR025302 Domain of unknown function DUF4162 N288_06730 5984b1fd36ea1757d1d324b1e650c8bf 299 Pfam PF00005 ABC transporter 19 158 7.9E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_17340 8b52406d5fa62e957db0e6222cac685b 296 PRINTS PR01703 Manganese superoxide dismutase signature 98 109 1.1E-20 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_17340 8b52406d5fa62e957db0e6222cac685b 296 PRINTS PR01703 Manganese superoxide dismutase signature 158 171 1.1E-20 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_17340 8b52406d5fa62e957db0e6222cac685b 296 PRINTS PR01703 Manganese superoxide dismutase signature 249 261 1.1E-20 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_17340 8b52406d5fa62e957db0e6222cac685b 296 PRINTS PR01703 Manganese superoxide dismutase signature 211 219 1.1E-20 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_17340 8b52406d5fa62e957db0e6222cac685b 296 PRINTS PR01703 Manganese superoxide dismutase signature 119 132 1.1E-20 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_17340 8b52406d5fa62e957db0e6222cac685b 296 Gene3D G3DSA:1.10.287.990 112 175 1.5E-26 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_17340 8b52406d5fa62e957db0e6222cac685b 296 Gene3D G3DSA:2.40.500.20 176 294 1.4E-45 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_17340 8b52406d5fa62e957db0e6222cac685b 296 SUPERFAMILY SSF54719 174 288 3.54E-43 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_17340 8b52406d5fa62e957db0e6222cac685b 296 SUPERFAMILY SSF46609 94 180 5.63E-32 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_17340 8b52406d5fa62e957db0e6222cac685b 296 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 182 284 7.8E-37 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_17340 8b52406d5fa62e957db0e6222cac685b 296 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 251 258 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_17340 8b52406d5fa62e957db0e6222cac685b 296 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 95 175 2.7E-28 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 N288_03765 00e6e83bf408c90e5d305b9bdac09c24 155 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 146 4.8E-42 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I N288_03765 00e6e83bf408c90e5d305b9bdac09c24 155 SMART SM00226 2 148 8.6E-55 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I N288_03765 00e6e83bf408c90e5d305b9bdac09c24 155 SUPERFAMILY SSF52788 2 149 9.55E-49 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily N288_03765 00e6e83bf408c90e5d305b9bdac09c24 155 Gene3D G3DSA:3.40.50.2300 1 152 5.7E-60 T 12-10-2018 N288_03765 00e6e83bf408c90e5d305b9bdac09c24 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 47 63 3.5E-14 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 N288_03765 00e6e83bf408c90e5d305b9bdac09c24 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 122 137 3.5E-14 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 N288_03765 00e6e83bf408c90e5d305b9bdac09c24 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 3.5E-14 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 N288_03765 00e6e83bf408c90e5d305b9bdac09c24 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 81 96 3.5E-14 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 N288_00615 d6ca88860a1bdbaafc43dbd07abf0f0e 360 SUPERFAMILY SSF88723 162 288 1.64E-24 T 12-10-2018 IPR029060 PIN-like domain superfamily N288_00615 d6ca88860a1bdbaafc43dbd07abf0f0e 360 SMART SM00670 160 267 7.5E-15 T 12-10-2018 IPR002716 PIN domain N288_00615 d6ca88860a1bdbaafc43dbd07abf0f0e 360 Gene3D G3DSA:3.40.50.1010 157 291 1.2E-53 T 12-10-2018 N288_00500 cbb884d9cb07fa900a3f0d2d6212dcad 496 Pfam PF01336 OB-fold nucleic acid binding domain 62 139 1.1E-14 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 N288_00500 cbb884d9cb07fa900a3f0d2d6212dcad 496 PIRSF PIRSF039101 2 496 3.0E-204 T 12-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 N288_00500 cbb884d9cb07fa900a3f0d2d6212dcad 496 SUPERFAMILY SSF55681 155 494 1.36E-123 T 12-10-2018 N288_00500 cbb884d9cb07fa900a3f0d2d6212dcad 496 Pfam PF00152 tRNA synthetases class II (D, K and N) 156 493 2.7E-83 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_00500 cbb884d9cb07fa900a3f0d2d6212dcad 496 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 14 496 46.266 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 N288_00500 cbb884d9cb07fa900a3f0d2d6212dcad 496 SUPERFAMILY SSF50249 7 148 1.74E-43 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_00500 cbb884d9cb07fa900a3f0d2d6212dcad 496 Gene3D G3DSA:2.40.50.140 8 148 1.8E-45 T 12-10-2018 N288_00500 cbb884d9cb07fa900a3f0d2d6212dcad 496 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 8 495 5.4E-227 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 N288_00500 cbb884d9cb07fa900a3f0d2d6212dcad 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 208 224 4.7E-40 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 N288_00500 cbb884d9cb07fa900a3f0d2d6212dcad 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 378 394 4.7E-40 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 N288_00500 cbb884d9cb07fa900a3f0d2d6212dcad 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 237 250 4.7E-40 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 N288_00500 cbb884d9cb07fa900a3f0d2d6212dcad 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 255 272 4.7E-40 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 N288_00500 cbb884d9cb07fa900a3f0d2d6212dcad 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 192 202 4.7E-40 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 N288_00500 cbb884d9cb07fa900a3f0d2d6212dcad 496 Gene3D G3DSA:3.30.930.10 149 493 4.6E-137 T 12-10-2018 N288_14540 8c95c07c7deeda4cc4a2c0b677586a25 176 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 5 164 35.811 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 N288_14540 8c95c07c7deeda4cc4a2c0b677586a25 176 Pfam PF01625 Peptide methionine sulfoxide reductase 8 158 5.2E-60 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 N288_14540 8c95c07c7deeda4cc4a2c0b677586a25 176 Gene3D G3DSA:3.30.1060.10 1 164 1.2E-64 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 N288_14540 8c95c07c7deeda4cc4a2c0b677586a25 176 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 157 1.3E-61 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 N288_14540 8c95c07c7deeda4cc4a2c0b677586a25 176 SUPERFAMILY SSF55068 3 169 1.96E-69 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 N288_13725 611797c2aad535ff412e46e74a8dd2e8 284 SUPERFAMILY SSF56112 3 264 1.46E-36 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_13725 611797c2aad535ff412e46e74a8dd2e8 284 Gene3D G3DSA:3.30.200.20 3 86 3.5E-5 T 12-10-2018 N288_13725 611797c2aad535ff412e46e74a8dd2e8 284 Pfam PF01636 Phosphotransferase enzyme family 21 234 1.1E-25 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase N288_13725 611797c2aad535ff412e46e74a8dd2e8 284 Gene3D G3DSA:3.90.1200.10 93 277 4.3E-20 T 12-10-2018 N288_06875 dfd4a5da8451db9ce028227c09576dc7 236 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 1 234 3.0E-78 T 12-10-2018 N288_06875 dfd4a5da8451db9ce028227c09576dc7 236 Pfam PF12787 EcsC protein family 9 234 6.4E-77 T 12-10-2018 IPR024787 EcsC protein N288_21710 37fadbe38578a6a3db19226a6b4a05c9 213 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 5 184 4.6E-61 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 N288_21710 37fadbe38578a6a3db19226a6b4a05c9 213 Pfam PF01634 ATP phosphoribosyltransferase 54 204 5.1E-49 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 N288_21710 37fadbe38578a6a3db19226a6b4a05c9 213 SUPERFAMILY SSF53850 2 207 2.82E-65 T 12-10-2018 N288_21710 37fadbe38578a6a3db19226a6b4a05c9 213 Gene3D G3DSA:3.40.190.10 95 176 9.9E-79 T 12-10-2018 N288_21710 37fadbe38578a6a3db19226a6b4a05c9 213 Gene3D G3DSA:3.40.190.10 6 199 9.9E-79 T 12-10-2018 N288_21710 37fadbe38578a6a3db19226a6b4a05c9 213 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 143 164 - T 12-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 N288_21710 37fadbe38578a6a3db19226a6b4a05c9 213 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 4 208 56.129 T 12-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 N288_11325 1ff69a9a92c8221c5202853700e62abb 363 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 29 349 7.7E-87 T 12-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 N288_11325 1ff69a9a92c8221c5202853700e62abb 363 Gene3D G3DSA:3.40.50.2000 3 185 4.7E-104 T 12-10-2018 N288_11325 1ff69a9a92c8221c5202853700e62abb 363 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 334 8.6E-80 T 12-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 N288_11325 1ff69a9a92c8221c5202853700e62abb 363 SUPERFAMILY SSF53756 1 358 7.63E-96 T 12-10-2018 N288_11325 1ff69a9a92c8221c5202853700e62abb 363 Gene3D G3DSA:3.40.50.2000 186 327 4.7E-104 T 12-10-2018 N288_01525 3a5fd63946723eba92af6319ba5db921 277 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 7 136 4.0E-23 T 12-10-2018 N288_01525 3a5fd63946723eba92af6319ba5db921 277 Gene3D G3DSA:1.10.490.10 1 137 3.8E-34 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 N288_01525 3a5fd63946723eba92af6319ba5db921 277 Gene3D G3DSA:3.30.750.24 149 269 1.7E-39 T 12-10-2018 IPR036513 STAS domain superfamily N288_01525 3a5fd63946723eba92af6319ba5db921 277 Pfam PF08678 Rsbr N terminal 9 137 1.9E-44 T 12-10-2018 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain N288_01525 3a5fd63946723eba92af6319ba5db921 277 Pfam PF01740 STAS domain 156 254 3.4E-14 T 12-10-2018 IPR002645 STAS domain N288_01525 3a5fd63946723eba92af6319ba5db921 277 SUPERFAMILY SSF52091 151 255 2.75E-17 T 12-10-2018 IPR036513 STAS domain superfamily N288_07050 65e3443b90ee9e6a25c63c926f40676f 330 Pfam PF04392 ABC transporter substrate binding protein 40 328 7.4E-84 T 12-10-2018 IPR007487 ABC transporter, substrate-binding protein N288_07050 65e3443b90ee9e6a25c63c926f40676f 330 Gene3D G3DSA:3.40.50.2300 51 301 2.1E-86 T 12-10-2018 N288_07050 65e3443b90ee9e6a25c63c926f40676f 330 SUPERFAMILY SSF53822 47 300 6.2E-17 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_07050 65e3443b90ee9e6a25c63c926f40676f 330 Gene3D G3DSA:3.40.50.2300 150 320 2.1E-86 T 12-10-2018 N288_19310 e6c8f802c0621d82d1f866f55752ff02 204 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 195 49.005 T 12-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 N288_19310 e6c8f802c0621d82d1f866f55752ff02 204 Pfam PF01725 Ham1 family 4 190 2.5E-59 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 N288_19310 e6c8f802c0621d82d1f866f55752ff02 204 SUPERFAMILY SSF52972 2 193 3.14E-69 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like N288_19310 e6c8f802c0621d82d1f866f55752ff02 204 Gene3D G3DSA:3.90.950.10 1 197 8.9E-76 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like N288_19310 e6c8f802c0621d82d1f866f55752ff02 204 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 193 2.6E-64 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 N288_24450 ff769b4c2fa2200d550a443e52c3b91c 329 Gene3D G3DSA:3.30.1780.10 4 324 6.0E-99 T 12-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 N288_24450 ff769b4c2fa2200d550a443e52c3b91c 329 PIRSF PIRSF001439 1 329 5.1E-82 T 12-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 N288_24450 ff769b4c2fa2200d550a443e52c3b91c 329 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 2 320 4.7E-70 T 12-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 N288_24450 ff769b4c2fa2200d550a443e52c3b91c 329 SUPERFAMILY SSF51735 1 328 5.46E-94 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_24450 ff769b4c2fa2200d550a443e52c3b91c 329 Gene3D G3DSA:3.40.50.720 124 302 6.0E-99 T 12-10-2018 N288_21700 2e4db0b1082107aef60dbdeb9c466d27 195 Gene3D G3DSA:3.30.230.40 91 195 1.0E-40 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 N288_21700 2e4db0b1082107aef60dbdeb9c466d27 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 195 42.0 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 N288_21700 2e4db0b1082107aef60dbdeb9c466d27 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 N288_21700 2e4db0b1082107aef60dbdeb9c466d27 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 175 3.1E-64 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 N288_21700 2e4db0b1082107aef60dbdeb9c466d27 195 SUPERFAMILY SSF54211 3 87 3.16E-31 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_21700 2e4db0b1082107aef60dbdeb9c466d27 195 Gene3D G3DSA:3.30.230.40 1 90 5.2E-37 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 N288_21700 2e4db0b1082107aef60dbdeb9c466d27 195 SUPERFAMILY SSF54211 88 180 8.5E-36 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_21700 2e4db0b1082107aef60dbdeb9c466d27 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 157 169 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 N288_24890 661c8ddab37fdca833c4ca40f230f038 399 Pfam PF13378 Enolase C-terminal domain-like 157 372 1.2E-39 T 12-10-2018 IPR029065 Enolase C-terminal domain-like N288_24890 661c8ddab37fdca833c4ca40f230f038 399 SUPERFAMILY SSF51604 102 379 3.67E-69 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily N288_24890 661c8ddab37fdca833c4ca40f230f038 399 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 114 5.9E-25 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain N288_24890 661c8ddab37fdca833c4ca40f230f038 399 SMART SM00922 132 252 4.9E-12 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal N288_24890 661c8ddab37fdca833c4ca40f230f038 399 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 89 114 - T 12-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 N288_24890 661c8ddab37fdca833c4ca40f230f038 399 Gene3D G3DSA:3.30.390.10 6 396 1.1E-171 T 12-10-2018 IPR029017 Enolase-like, N-terminal N288_24890 661c8ddab37fdca833c4ca40f230f038 399 Gene3D G3DSA:3.20.20.120 109 363 1.1E-171 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily N288_24890 661c8ddab37fdca833c4ca40f230f038 399 SUPERFAMILY SSF54826 14 116 1.7E-29 T 12-10-2018 N288_10115 5a078a7b7c49f1528f02dfdf4d8d8f11 263 Gene3D G3DSA:3.30.70.260 12 76 5.2E-5 T 12-10-2018 N288_10115 5a078a7b7c49f1528f02dfdf4d8d8f11 263 SUPERFAMILY SSF55021 5 75 5.0E-9 T 12-10-2018 N288_10115 5a078a7b7c49f1528f02dfdf4d8d8f11 263 Pfam PF11868 Protein of unknown function (DUF3388) 72 261 1.9E-108 T 12-10-2018 IPR024514 Domain of unknown function DUF3388 N288_10115 5a078a7b7c49f1528f02dfdf4d8d8f11 263 PIRSF PIRSF021288 1 262 4.0E-147 T 12-10-2018 IPR016784 Uncharacterised protein UCP021288 with ACT domain N288_23645 b2b7d1a96310acf3bcde8af5da69008c 622 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 1.1E-59 T 12-10-2018 N288_23645 b2b7d1a96310acf3bcde8af5da69008c 622 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 154 175 1.1E-59 T 12-10-2018 N288_23645 b2b7d1a96310acf3bcde8af5da69008c 622 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 107 127 1.1E-59 T 12-10-2018 N288_23645 b2b7d1a96310acf3bcde8af5da69008c 622 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 221 242 1.1E-59 T 12-10-2018 N288_23645 b2b7d1a96310acf3bcde8af5da69008c 622 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 311 323 1.1E-59 T 12-10-2018 N288_23645 b2b7d1a96310acf3bcde8af5da69008c 622 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 412 431 1.1E-59 T 12-10-2018 N288_23645 b2b7d1a96310acf3bcde8af5da69008c 622 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 243 269 1.1E-59 T 12-10-2018 N288_23645 b2b7d1a96310acf3bcde8af5da69008c 622 Pfam PF00361 Proton-conducting membrane transporter 130 419 6.1E-90 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23645 b2b7d1a96310acf3bcde8af5da69008c 622 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 6 613 1.8E-203 T 12-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23645 b2b7d1a96310acf3bcde8af5da69008c 622 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 117 7.3E-18 T 12-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23645 b2b7d1a96310acf3bcde8af5da69008c 622 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 353 375 1.5E-9 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 N288_23645 b2b7d1a96310acf3bcde8af5da69008c 622 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 411 433 1.5E-9 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 N288_23645 b2b7d1a96310acf3bcde8af5da69008c 622 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 81 101 1.5E-9 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 N288_15605 083b03dce9ac88052916d80d15d70748 402 SUPERFAMILY SSF53686 8 393 4.85E-152 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme N288_15605 083b03dce9ac88052916d80d15d70748 402 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 7 396 53.73 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 N288_15605 083b03dce9ac88052916d80d15d70748 402 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 58 383 3.7E-48 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme N288_15605 083b03dce9ac88052916d80d15d70748 402 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 86 100 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 N288_15605 083b03dce9ac88052916d80d15d70748 402 Gene3D G3DSA:3.40.50.1100 15 211 3.3E-193 T 12-10-2018 N288_15605 083b03dce9ac88052916d80d15d70748 402 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 12 394 1.1E-196 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 N288_15605 083b03dce9ac88052916d80d15d70748 402 PIRSF PIRSF001413 3 402 1.1E-170 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 N288_15605 083b03dce9ac88052916d80d15d70748 402 Gene3D G3DSA:3.40.50.1100 59 389 3.3E-193 T 12-10-2018 N288_00040 f21b0eb6b71f65059d183dbab2a8a096 844 Gene3D G3DSA:2.120.10.90 497 809 4.4E-125 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal N288_00040 f21b0eb6b71f65059d183dbab2a8a096 844 SMART SM00434 12 465 1.5E-300 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 N288_00040 f21b0eb6b71f65059d183dbab2a8a096 844 Gene3D G3DSA:3.30.1360.40 237 333 1.8E-221 T 12-10-2018 N288_00040 f21b0eb6b71f65059d183dbab2a8a096 844 SUPERFAMILY SSF101904 500 823 1.44E-112 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal N288_00040 f21b0eb6b71f65059d183dbab2a8a096 844 Gene3D G3DSA:3.90.199.10 33 486 1.8E-221 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 N288_00040 f21b0eb6b71f65059d183dbab2a8a096 844 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 472 1.7E-162 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 N288_00040 f21b0eb6b71f65059d183dbab2a8a096 844 Gene3D G3DSA:1.10.268.10 370 459 1.8E-221 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 N288_00040 f21b0eb6b71f65059d183dbab2a8a096 844 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 9 809 0.0 T 12-10-2018 N288_00040 f21b0eb6b71f65059d183dbab2a8a096 844 SUPERFAMILY SSF56719 31 488 9.81E-185 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 N288_00040 f21b0eb6b71f65059d183dbab2a8a096 844 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 6 810 25.223 T 12-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 N288_00040 f21b0eb6b71f65059d183dbab2a8a096 844 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 556 604 5.3E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 N288_00040 f21b0eb6b71f65059d183dbab2a8a096 844 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 613 655 3.1E-7 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 N288_00040 f21b0eb6b71f65059d183dbab2a8a096 844 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 660 705 8.0E-16 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 N288_00040 f21b0eb6b71f65059d183dbab2a8a096 844 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 710 756 1.2E-12 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 N288_00040 f21b0eb6b71f65059d183dbab2a8a096 844 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 506 551 2.6E-14 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 N288_00040 f21b0eb6b71f65059d183dbab2a8a096 844 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 760 806 1.9E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 N288_14550 583d88ad38409c3992ecb1a165a56c5c 430 Gene3D G3DSA:3.30.930.10 1 337 2.2E-98 T 12-10-2018 N288_14550 583d88ad38409c3992ecb1a165a56c5c 430 PIRSF PIRSF001549 2 427 2.3E-112 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 N288_14550 583d88ad38409c3992ecb1a165a56c5c 430 Pfam PF13393 Histidyl-tRNA synthetase 11 328 7.7E-38 T 12-10-2018 N288_14550 583d88ad38409c3992ecb1a165a56c5c 430 SUPERFAMILY SSF52954 346 422 2.11E-15 T 12-10-2018 N288_14550 583d88ad38409c3992ecb1a165a56c5c 430 Gene3D G3DSA:3.40.50.800 340 429 3.6E-19 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily N288_14550 583d88ad38409c3992ecb1a165a56c5c 430 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 419 3.0E-105 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 N288_14550 583d88ad38409c3992ecb1a165a56c5c 430 SUPERFAMILY SSF55681 5 332 1.91E-69 T 12-10-2018 N288_14550 583d88ad38409c3992ecb1a165a56c5c 430 Pfam PF03129 Anticodon binding domain 348 419 5.3E-10 T 12-10-2018 IPR004154 Anticodon-binding N288_14550 583d88ad38409c3992ecb1a165a56c5c 430 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 4 428 23.611 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 N288_16205 fdfa1785be5176f3f91b19916273797a 419 Pfam PF01546 Peptidase family M20/M25/M40 97 415 3.1E-40 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_16205 fdfa1785be5176f3f91b19916273797a 419 SUPERFAMILY SSF53187 8 418 1.91E-64 T 12-10-2018 N288_16205 fdfa1785be5176f3f91b19916273797a 419 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 20 409 1.8E-116 T 12-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase N288_16205 fdfa1785be5176f3f91b19916273797a 419 Pfam PF07687 Peptidase dimerisation domain 202 314 2.0E-18 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain N288_16205 fdfa1785be5176f3f91b19916273797a 419 Gene3D G3DSA:3.30.70.360 204 330 1.8E-142 T 12-10-2018 N288_16205 fdfa1785be5176f3f91b19916273797a 419 Gene3D G3DSA:3.40.630.10 27 418 1.8E-142 T 12-10-2018 N288_16205 fdfa1785be5176f3f91b19916273797a 419 SUPERFAMILY SSF55031 203 313 2.84E-16 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_00305 e7f1e9be2e86741654c0273f034e71bc 289 Gene3D G3DSA:3.30.70.890 162 284 1.6E-29 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily N288_00305 e7f1e9be2e86741654c0273f034e71bc 289 PIRSF PIRSF010376 2 288 1.4E-98 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 N288_00305 e7f1e9be2e86741654c0273f034e71bc 289 SUPERFAMILY SSF54211 3 157 9.11E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_00305 e7f1e9be2e86741654c0273f034e71bc 289 Pfam PF08544 GHMP kinases C terminal 197 267 1.2E-9 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain N288_00305 e7f1e9be2e86741654c0273f034e71bc 289 Gene3D G3DSA:3.30.230.10 1 158 2.2E-61 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup N288_00305 e7f1e9be2e86741654c0273f034e71bc 289 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 279 36.072 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 N288_00305 e7f1e9be2e86741654c0273f034e71bc 289 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 287 3.3E-109 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 N288_00305 e7f1e9be2e86741654c0273f034e71bc 289 Pfam PF00288 GHMP kinases N terminal domain 87 144 1.2E-11 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 N288_00305 e7f1e9be2e86741654c0273f034e71bc 289 SUPERFAMILY SSF55060 162 281 2.41E-32 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily N288_06235 3b114d695f13dd457103412ca40e54ba 211 Pfam PF00072 Response regulator receiver domain 5 116 1.2E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_06235 3b114d695f13dd457103412ca40e54ba 211 SUPERFAMILY SSF46894 143 210 2.38E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_06235 3b114d695f13dd457103412ca40e54ba 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 6.8E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_06235 3b114d695f13dd457103412ca40e54ba 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 6.8E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_06235 3b114d695f13dd457103412ca40e54ba 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 6.8E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_06235 3b114d695f13dd457103412ca40e54ba 211 SUPERFAMILY SSF52172 1 134 1.28E-35 T 12-10-2018 IPR011006 CheY-like superfamily N288_06235 3b114d695f13dd457103412ca40e54ba 211 SMART SM00421 148 205 8.4E-27 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_06235 3b114d695f13dd457103412ca40e54ba 211 SMART SM00448 3 116 3.4E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_06235 3b114d695f13dd457103412ca40e54ba 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_06235 3b114d695f13dd457103412ca40e54ba 211 Gene3D G3DSA:3.40.50.12740 3 211 1.1E-74 T 12-10-2018 N288_06235 3b114d695f13dd457103412ca40e54ba 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 3.9E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_02885 95f28029a64d1d5d9d1cc23ccc6260ca 508 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 5 499 2.3E-133 T 12-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 N288_02885 95f28029a64d1d5d9d1cc23ccc6260ca 508 SUPERFAMILY SSF51905 1 497 5.44E-69 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_02885 95f28029a64d1d5d9d1cc23ccc6260ca 508 Gene3D G3DSA:3.50.50.60 2 109 1.0E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_02885 95f28029a64d1d5d9d1cc23ccc6260ca 508 Gene3D G3DSA:3.50.50.60 202 329 2.4E-17 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_02885 95f28029a64d1d5d9d1cc23ccc6260ca 508 Pfam PF01593 Flavin containing amine oxidoreductase 12 495 1.5E-35 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 N288_02885 95f28029a64d1d5d9d1cc23ccc6260ca 508 PRINTS PR00419 Adrenodoxin reductase family signature 4 26 5.8E-6 T 12-10-2018 N288_02885 95f28029a64d1d5d9d1cc23ccc6260ca 508 PRINTS PR00419 Adrenodoxin reductase family signature 27 40 5.8E-6 T 12-10-2018 N288_23730 b032ce7f473477f8b7e32d0d24a3222a 124 Pfam PF03899 ATP synthase I chain 10 105 1.9E-19 T 12-10-2018 IPR005598 ATP synthase protein I N288_23730 b032ce7f473477f8b7e32d0d24a3222a 124 ProDom PD020811 ATP SYNTHASE I ION HYDROLASE SUBUNIT I CF0 MEMBRANE HYDROGEN 23 118 6.0E-29 T 12-10-2018 N288_23865 a2a6d194a939da6d0707cf70af971cc8 424 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 415 222.351 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 N288_23865 a2a6d194a939da6d0707cf70af971cc8 424 Pfam PF07498 Rho termination factor, N-terminal domain 8 49 2.3E-16 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 N288_23865 a2a6d194a939da6d0707cf70af971cc8 424 Pfam PF07497 Rho termination factor, RNA-binding domain 53 126 1.6E-31 T 12-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 N288_23865 a2a6d194a939da6d0707cf70af971cc8 424 SUPERFAMILY SSF52540 91 369 2.05E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_23865 a2a6d194a939da6d0707cf70af971cc8 424 Gene3D G3DSA:3.40.50.300 131 413 1.0E-121 T 12-10-2018 N288_23865 a2a6d194a939da6d0707cf70af971cc8 424 SUPERFAMILY SSF50249 49 114 2.86E-7 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_23865 a2a6d194a939da6d0707cf70af971cc8 424 SMART SM00357 54 119 1.2E-19 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 N288_23865 a2a6d194a939da6d0707cf70af971cc8 424 TIGRFAM TIGR00767 rho: transcription termination factor Rho 4 412 5.0E-204 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 N288_23865 a2a6d194a939da6d0707cf70af971cc8 424 SMART SM00382 168 353 6.3E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_23865 a2a6d194a939da6d0707cf70af971cc8 424 Gene3D G3DSA:2.40.50.140 48 124 7.7E-30 T 12-10-2018 N288_23865 a2a6d194a939da6d0707cf70af971cc8 424 SUPERFAMILY SSF68912 3 49 2.12E-11 T 12-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily N288_23865 a2a6d194a939da6d0707cf70af971cc8 424 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 157 361 1.2E-18 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_23865 a2a6d194a939da6d0707cf70af971cc8 424 SMART SM00959 7 49 4.6E-17 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 N288_23865 a2a6d194a939da6d0707cf70af971cc8 424 Gene3D G3DSA:1.10.720.10 1 47 1.0E-21 T 12-10-2018 N288_03945 bc785225bed13e33293147b93ca9db2e 360 Gene3D G3DSA:3.40.50.2300 50 315 8.3E-82 T 12-10-2018 N288_03945 bc785225bed13e33293147b93ca9db2e 360 Gene3D G3DSA:3.40.50.2300 149 321 8.3E-82 T 12-10-2018 N288_03945 bc785225bed13e33293147b93ca9db2e 360 SUPERFAMILY SSF53822 47 326 3.26E-55 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_03945 bc785225bed13e33293147b93ca9db2e 360 Pfam PF13407 Periplasmic binding protein domain 50 308 3.5E-39 T 12-10-2018 IPR025997 Periplasmic binding protein N288_11255 09ce837b42b60af2638152125953a9cc 444 PIRSF PIRSF006444 1 437 8.2E-185 T 12-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 N288_11255 09ce837b42b60af2638152125953a9cc 444 Gene3D G3DSA:3.30.300.30 326 436 2.7E-23 T 12-10-2018 N288_11255 09ce837b42b60af2638152125953a9cc 444 SUPERFAMILY SSF56801 25 405 1.83E-57 T 12-10-2018 N288_11255 09ce837b42b60af2638152125953a9cc 444 Gene3D G3DSA:3.40.50.12780 1 325 5.8E-126 T 12-10-2018 N288_11255 09ce837b42b60af2638152125953a9cc 444 Pfam PF14535 AMP-binding enzyme C-terminal domain 334 434 4.0E-20 T 12-10-2018 IPR028154 AMP-dependent ligase, C-terminal N288_11255 09ce837b42b60af2638152125953a9cc 444 Pfam PF00501 AMP-binding enzyme 80 287 6.9E-11 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 N288_21805 0b2389dfeb1e81992e07605c1236d375 77 Pfam PF09964 Uncharacterized protein conserved in bacteria (DUF2198) 4 75 3.2E-35 T 12-10-2018 IPR019242 Protein of unknown function DUF2198 N288_01520 8ef0b1e1b2035c2d20b4f1f4d49e3d1d 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 111 7.0E-34 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 N288_01520 8ef0b1e1b2035c2d20b4f1f4d49e3d1d 116 Gene3D G3DSA:2.30.30.110 1 116 1.4E-53 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor N288_01520 8ef0b1e1b2035c2d20b4f1f4d49e3d1d 116 PIRSF PIRSF033490 1 113 1.1E-40 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 N288_01520 8ef0b1e1b2035c2d20b4f1f4d49e3d1d 116 SUPERFAMILY SSF50118 2 113 2.62E-42 T 12-10-2018 N288_23705 744d9b91b776236e0f74402f4c0d9c42 502 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 499 7.7E-259 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23705 744d9b91b776236e0f74402f4c0d9c42 502 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 493 2.0E-47 T 12-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23705 744d9b91b776236e0f74402f4c0d9c42 502 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 1.4E-20 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_23705 744d9b91b776236e0f74402f4c0d9c42 502 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_23705 744d9b91b776236e0f74402f4c0d9c42 502 Gene3D G3DSA:3.40.50.300 94 371 5.6E-127 T 12-10-2018 N288_23705 744d9b91b776236e0f74402f4c0d9c42 502 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 8.8E-73 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_23705 744d9b91b776236e0f74402f4c0d9c42 502 SUPERFAMILY SSF50615 10 94 7.85E-31 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_23705 744d9b91b776236e0f74402f4c0d9c42 502 Gene3D G3DSA:2.40.30.20 1 93 1.9E-37 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_23705 744d9b91b776236e0f74402f4c0d9c42 502 Gene3D G3DSA:1.20.150.20 372 499 1.5E-52 T 12-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23705 744d9b91b776236e0f74402f4c0d9c42 502 PIRSF PIRSF039088 1 501 1.3E-251 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23705 744d9b91b776236e0f74402f4c0d9c42 502 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 51.588 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23705 744d9b91b776236e0f74402f4c0d9c42 502 SUPERFAMILY SSF47917 372 499 7.06E-48 T 12-10-2018 N288_23705 744d9b91b776236e0f74402f4c0d9c42 502 SUPERFAMILY SSF52540 95 370 7.85E-98 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_19450 41b5beb6ba8832e4544480dc091876a0 804 Gene3D G3DSA:3.50.40.10 204 405 5.9E-83 T 12-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 N288_19450 41b5beb6ba8832e4544480dc091876a0 804 SUPERFAMILY SSF46955 411 483 2.29E-20 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily N288_19450 41b5beb6ba8832e4544480dc091876a0 804 Gene3D G3DSA:3.30.56.10 4 189 2.3E-70 T 12-10-2018 N288_19450 41b5beb6ba8832e4544480dc091876a0 804 SUPERFAMILY SSF54991 705 803 1.15E-30 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 N288_19450 41b5beb6ba8832e4544480dc091876a0 804 SUPERFAMILY SSF56037 209 402 4.97E-70 T 12-10-2018 N288_19450 41b5beb6ba8832e4544480dc091876a0 804 SUPERFAMILY SSF55681 475 694 5.96E-51 T 12-10-2018 N288_19450 41b5beb6ba8832e4544480dc091876a0 804 Gene3D G3DSA:2.40.50.140 40 161 2.3E-70 T 12-10-2018 N288_19450 41b5beb6ba8832e4544480dc091876a0 804 Gene3D G3DSA:3.30.56.10 411 483 6.8E-27 T 12-10-2018 N288_19450 41b5beb6ba8832e4544480dc091876a0 804 SMART SM00873 221 394 9.4E-88 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 N288_19450 41b5beb6ba8832e4544480dc091876a0 804 SUPERFAMILY SSF50249 36 199 2.08E-48 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_19450 41b5beb6ba8832e4544480dc091876a0 804 Pfam PF03484 tRNA synthetase B5 domain 414 479 1.0E-21 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 N288_19450 41b5beb6ba8832e4544480dc091876a0 804 SMART SM00896 710 803 1.2E-42 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 N288_19450 41b5beb6ba8832e4544480dc091876a0 804 Pfam PF03483 B3/4 domain 222 393 4.9E-66 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 N288_19450 41b5beb6ba8832e4544480dc091876a0 804 Pfam PF03147 Ferredoxin-fold anticodon binding domain 710 803 2.7E-28 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 N288_19450 41b5beb6ba8832e4544480dc091876a0 804 Gene3D G3DSA:3.30.930.10 495 697 3.1E-61 T 12-10-2018 N288_19450 41b5beb6ba8832e4544480dc091876a0 804 Pfam PF01588 Putative tRNA binding domain 46 152 7.3E-28 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 N288_19450 41b5beb6ba8832e4544480dc091876a0 804 Gene3D G3DSA:3.30.70.380 711 803 2.6E-29 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 N288_19450 41b5beb6ba8832e4544480dc091876a0 804 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 797 47.115 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 N288_19450 41b5beb6ba8832e4544480dc091876a0 804 SMART SM00874 411 479 7.9E-32 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 N288_19450 41b5beb6ba8832e4544480dc091876a0 804 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 803 4.9E-274 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 N288_23990 48f2d97fd22b2eea9148d71d2fcf9195 291 SUPERFAMILY SSF52768 16 290 1.58E-85 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily N288_23990 48f2d97fd22b2eea9148d71d2fcf9195 291 ProSitePatterns PS01053 Arginase family signature. 215 236 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 N288_23990 48f2d97fd22b2eea9148d71d2fcf9195 291 PIRSF PIRSF036979 1 291 5.6E-97 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 N288_23990 48f2d97fd22b2eea9148d71d2fcf9195 291 TIGRFAM TIGR01230 agmatinase: agmatinase 12 287 6.3E-114 T 12-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 N288_23990 48f2d97fd22b2eea9148d71d2fcf9195 291 Pfam PF00491 Arginase family 24 286 1.5E-80 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 N288_23990 48f2d97fd22b2eea9148d71d2fcf9195 291 Gene3D G3DSA:3.40.800.10 18 290 1.1E-93 T 12-10-2018 N288_15230 18bfdde62585a0b33a616f35d4bcb15d 260 SUPERFAMILY SSF46689 9 56 3.54E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_15230 18bfdde62585a0b33a616f35d4bcb15d 260 Pfam PF12833 Helix-turn-helix domain 29 105 1.2E-14 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_15230 18bfdde62585a0b33a616f35d4bcb15d 260 SMART SM00342 23 105 1.8E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_15230 18bfdde62585a0b33a616f35d4bcb15d 260 Gene3D G3DSA:1.10.10.60 2 110 5.9E-24 T 12-10-2018 N288_03790 533297a36f8997154cd7be6620fb8451 639 Pfam PF00122 E1-E2 ATPase 134 315 1.9E-50 T 12-10-2018 N288_03790 533297a36f8997154cd7be6620fb8451 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 335 349 2.5E-30 T 12-10-2018 N288_03790 533297a36f8997154cd7be6620fb8451 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 481 491 2.5E-30 T 12-10-2018 N288_03790 533297a36f8997154cd7be6620fb8451 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 553 2.5E-30 T 12-10-2018 N288_03790 533297a36f8997154cd7be6620fb8451 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 557 569 2.5E-30 T 12-10-2018 N288_03790 533297a36f8997154cd7be6620fb8451 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 184 198 2.5E-30 T 12-10-2018 N288_03790 533297a36f8997154cd7be6620fb8451 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 459 470 2.5E-30 T 12-10-2018 N288_03790 533297a36f8997154cd7be6620fb8451 639 Gene3D G3DSA:3.40.1110.10 346 466 6.0E-86 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 N288_03790 533297a36f8997154cd7be6620fb8451 639 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 84 636 3.0E-185 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 N288_03790 533297a36f8997154cd7be6620fb8451 639 SUPERFAMILY SSF81653 137 234 4.58E-26 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 N288_03790 533297a36f8997154cd7be6620fb8451 639 Gene3D G3DSA:3.40.50.1000 316 585 6.0E-86 T 12-10-2018 IPR023214 HAD superfamily N288_03790 533297a36f8997154cd7be6620fb8451 639 Gene3D G3DSA:2.70.150.20 128 239 1.7E-36 T 12-10-2018 N288_03790 533297a36f8997154cd7be6620fb8451 639 PRINTS PR00941 Cadmium-transporting ATPase signature 64 76 2.3E-15 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 N288_03790 533297a36f8997154cd7be6620fb8451 639 PRINTS PR00941 Cadmium-transporting ATPase signature 200 216 2.3E-15 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 N288_03790 533297a36f8997154cd7be6620fb8451 639 PRINTS PR00941 Cadmium-transporting ATPase signature 119 139 2.3E-15 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 N288_03790 533297a36f8997154cd7be6620fb8451 639 PRINTS PR00941 Cadmium-transporting ATPase signature 139 155 2.3E-15 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 N288_03790 533297a36f8997154cd7be6620fb8451 639 PRINTS PR00941 Cadmium-transporting ATPase signature 219 233 2.3E-15 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 N288_03790 533297a36f8997154cd7be6620fb8451 639 SUPERFAMILY SSF81665 86 615 1.57E-18 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 N288_03790 533297a36f8997154cd7be6620fb8451 639 Pfam PF00702 haloacid dehalogenase-like hydrolase 332 548 7.6E-39 T 12-10-2018 N288_03790 533297a36f8997154cd7be6620fb8451 639 SUPERFAMILY SSF56784 334 634 2.06E-56 T 12-10-2018 IPR036412 HAD-like superfamily N288_03790 533297a36f8997154cd7be6620fb8451 639 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 89 636 8.4E-120 T 12-10-2018 N288_03790 533297a36f8997154cd7be6620fb8451 639 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 107 610 2.8E-85 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 N288_03790 533297a36f8997154cd7be6620fb8451 639 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 337 343 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 N288_03790 533297a36f8997154cd7be6620fb8451 639 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 84 421 5.9E-100 T 12-10-2018 N288_03790 533297a36f8997154cd7be6620fb8451 639 ProSitePatterns PS01229 Hypothetical cof family signature 2. 534 556 - T 12-10-2018 N288_26025 a74c9d66436543ba9d702c684b824657 124 SUPERFAMILY SSF54211 1 110 5.82E-33 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_26025 a74c9d66436543ba9d702c684b824657 124 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 111 19.544 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 N288_26025 a74c9d66436543ba9d702c684b824657 124 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 1 106 3.8E-28 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 N288_26025 a74c9d66436543ba9d702c684b824657 124 Pfam PF00825 Ribonuclease P 1 106 1.3E-33 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 N288_26025 a74c9d66436543ba9d702c684b824657 124 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 7 107 6.0E-37 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 N288_26025 a74c9d66436543ba9d702c684b824657 124 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 51 65 - T 12-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 N288_26025 a74c9d66436543ba9d702c684b824657 124 Gene3D G3DSA:3.30.230.10 1 113 2.7E-36 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup N288_06910 3eadd66a68a68fb13fbf5e951db7c293 412 Gene3D G3DSA:1.10.287.130 178 252 8.4E-18 T 12-10-2018 N288_06910 3eadd66a68a68fb13fbf5e951db7c293 412 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 60 181 6.2E-17 T 12-10-2018 IPR000014 PAS domain N288_06910 3eadd66a68a68fb13fbf5e951db7c293 412 Gene3D G3DSA:3.30.565.10 255 411 6.0E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_06910 3eadd66a68a68fb13fbf5e951db7c293 412 Pfam PF00989 PAS fold 65 174 2.5E-10 T 12-10-2018 IPR013767 PAS fold GO:0006355 N288_06910 3eadd66a68a68fb13fbf5e951db7c293 412 SUPERFAMILY SSF47384 185 251 1.73E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_06910 3eadd66a68a68fb13fbf5e951db7c293 412 SMART SM00091 64 130 4.5E-5 T 12-10-2018 IPR000014 PAS domain N288_06910 3eadd66a68a68fb13fbf5e951db7c293 412 SMART SM00387 296 403 2.3E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_06910 3eadd66a68a68fb13fbf5e951db7c293 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 348 5.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06910 3eadd66a68a68fb13fbf5e951db7c293 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 362 5.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06910 3eadd66a68a68fb13fbf5e951db7c293 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 381 5.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06910 3eadd66a68a68fb13fbf5e951db7c293 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 400 5.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06910 3eadd66a68a68fb13fbf5e951db7c293 412 SUPERFAMILY SSF55785 53 175 2.44E-15 T 12-10-2018 IPR035965 PAS domain superfamily N288_06910 3eadd66a68a68fb13fbf5e951db7c293 412 SMART SM00388 193 254 1.7E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_06910 3eadd66a68a68fb13fbf5e951db7c293 412 Gene3D G3DSA:3.30.450.20 53 175 2.4E-17 T 12-10-2018 N288_06910 3eadd66a68a68fb13fbf5e951db7c293 412 SUPERFAMILY SSF55874 248 405 8.77E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_06910 3eadd66a68a68fb13fbf5e951db7c293 412 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 298 402 3.1E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_06910 3eadd66a68a68fb13fbf5e951db7c293 412 Pfam PF00512 His Kinase A (phospho-acceptor) domain 195 251 4.5E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_07150 3befdc5e5edf75dbe885cce969a33037 235 Gene3D G3DSA:3.40.50.300 2 235 1.8E-55 T 12-10-2018 N288_07150 3befdc5e5edf75dbe885cce969a33037 235 SMART SM00382 29 211 6.2E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_07150 3befdc5e5edf75dbe885cce969a33037 235 SUPERFAMILY SSF52540 5 228 8.8E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_07150 3befdc5e5edf75dbe885cce969a33037 235 Pfam PF00005 ABC transporter 20 163 3.4E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_07150 3befdc5e5edf75dbe885cce969a33037 235 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_16445 33db067bbb218aad4a61c13cd4a20a24 570 SUPERFAMILY SSF143975 4 379 7.98E-147 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 N288_16445 33db067bbb218aad4a61c13cd4a20a24 570 SUPERFAMILY SSF52016 381 558 4.71E-57 T 12-10-2018 N288_16445 33db067bbb218aad4a61c13cd4a20a24 570 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 125 135 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 N288_16445 33db067bbb218aad4a61c13cd4a20a24 570 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 7 557 47.187 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 N288_16445 33db067bbb218aad4a61c13cd4a20a24 570 Pfam PF00920 Dehydratase family 37 554 2.5E-223 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 N288_16445 33db067bbb218aad4a61c13cd4a20a24 570 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 466 477 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 N288_16445 33db067bbb218aad4a61c13cd4a20a24 570 Gene3D G3DSA:3.50.30.80 380 529 6.5E-53 T 12-10-2018 N288_16445 33db067bbb218aad4a61c13cd4a20a24 570 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 20 557 2.2E-234 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 N288_12510 71cd0b9dc8cc8d2ae99e45223e625f21 106 SUPERFAMILY SSF89447 3 52 6.8E-5 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily N288_12510 71cd0b9dc8cc8d2ae99e45223e625f21 106 Gene3D G3DSA:2.10.260.10 7 94 1.3E-10 T 12-10-2018 N288_12510 71cd0b9dc8cc8d2ae99e45223e625f21 106 SUPERFAMILY SSF89447 56 92 8.02E-5 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily N288_11880 bc9ee3c473144fcebd77198ec610bc19 250 SMART SM00382 28 224 5.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_11880 bc9ee3c473144fcebd77198ec610bc19 250 Gene3D G3DSA:3.40.50.300 1 246 5.4E-68 T 12-10-2018 N288_11880 bc9ee3c473144fcebd77198ec610bc19 250 Pfam PF00005 ABC transporter 19 175 3.5E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_11880 bc9ee3c473144fcebd77198ec610bc19 250 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_11880 bc9ee3c473144fcebd77198ec610bc19 250 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 1 244 4.2E-89 T 12-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 N288_11880 bc9ee3c473144fcebd77198ec610bc19 250 SUPERFAMILY SSF52540 2 236 7.14E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_11130 4dab44e714862bdfcff76b7a7842a07e 148 Gene3D G3DSA:3.40.630.30 13 146 1.5E-13 T 12-10-2018 N288_11130 4dab44e714862bdfcff76b7a7842a07e 148 Pfam PF13673 Acetyltransferase (GNAT) domain 32 145 4.3E-6 T 12-10-2018 IPR000182 GNAT domain N288_11130 4dab44e714862bdfcff76b7a7842a07e 148 SUPERFAMILY SSF55729 15 146 1.41E-14 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_07850 dc72f00037bf6aeaa36a1277c3a5784e 588 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 249 412 2.8E-36 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 N288_07850 dc72f00037bf6aeaa36a1277c3a5784e 588 Gene3D G3DSA:1.20.140.10 249 410 1.1E-125 T 12-10-2018 N288_07850 dc72f00037bf6aeaa36a1277c3a5784e 588 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 144 237 2.0E-20 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 N288_07850 dc72f00037bf6aeaa36a1277c3a5784e 588 SUPERFAMILY SSF56645 21 260 3.14E-72 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 N288_07850 dc72f00037bf6aeaa36a1277c3a5784e 588 SUPERFAMILY SSF47203 247 416 2.42E-40 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 N288_07850 dc72f00037bf6aeaa36a1277c3a5784e 588 Gene3D G3DSA:2.40.110.10 143 248 1.1E-125 T 12-10-2018 N288_07850 dc72f00037bf6aeaa36a1277c3a5784e 588 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 146 158 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 N288_07850 dc72f00037bf6aeaa36a1277c3a5784e 588 Gene3D G3DSA:1.10.540.10 37 142 1.1E-125 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 N288_07850 dc72f00037bf6aeaa36a1277c3a5784e 588 Gene3D G3DSA:1.20.140.10 418 588 3.1E-33 T 12-10-2018 N288_07850 dc72f00037bf6aeaa36a1277c3a5784e 588 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 28 140 1.1E-30 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 N288_01735 0e8529d0a66c1fecbb84d219b997ce6c 104 SUPERFAMILY SSF48295 3 94 3.4E-33 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 N288_01735 0e8529d0a66c1fecbb84d219b997ce6c 104 Pfam PF01371 Trp repressor protein 10 93 1.7E-34 T 12-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 N288_01735 0e8529d0a66c1fecbb84d219b997ce6c 104 PIRSF PIRSF012508 1 100 6.9E-49 T 12-10-2018 IPR013368 TrpR homologue YerC/YecD N288_01735 0e8529d0a66c1fecbb84d219b997ce6c 104 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 7 94 1.4E-49 T 12-10-2018 IPR013368 TrpR homologue YerC/YecD N288_01735 0e8529d0a66c1fecbb84d219b997ce6c 104 Gene3D G3DSA:1.10.1270.10 2 104 5.2E-40 T 12-10-2018 IPR038116 TrpR-like superfamily N288_13525 45bcc99baed87c8375c1f05604e1d26d 430 SMART SM01091 353 430 5.3E-19 T 12-10-2018 IPR005170 Transporter-associated domain N288_13525 45bcc99baed87c8375c1f05604e1d26d 430 Gene3D G3DSA:3.10.580.10 195 346 2.2E-49 T 12-10-2018 N288_13525 45bcc99baed87c8375c1f05604e1d26d 430 SUPERFAMILY SSF56176 348 428 6.82E-15 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 N288_13525 45bcc99baed87c8375c1f05604e1d26d 430 Pfam PF01595 Domain of unknown function DUF21 7 201 3.0E-49 T 12-10-2018 IPR002550 CNNM, transmembrane domain N288_13525 45bcc99baed87c8375c1f05604e1d26d 430 Pfam PF03471 Transporter associated domain 354 429 5.6E-14 T 12-10-2018 IPR005170 Transporter-associated domain N288_13525 45bcc99baed87c8375c1f05604e1d26d 430 Pfam PF00571 CBS domain 217 272 2.4E-5 T 12-10-2018 IPR000644 CBS domain N288_13525 45bcc99baed87c8375c1f05604e1d26d 430 Pfam PF00571 CBS domain 288 337 2.5E-5 T 12-10-2018 IPR000644 CBS domain N288_13525 45bcc99baed87c8375c1f05604e1d26d 430 Gene3D G3DSA:3.30.465.10 347 430 7.9E-15 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 N288_13525 45bcc99baed87c8375c1f05604e1d26d 430 SUPERFAMILY SSF54631 204 340 5.68E-29 T 12-10-2018 N288_24700 0e02b837a513c12ca2df99c2c5897a32 132 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 101 1.3E-15 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain N288_24700 0e02b837a513c12ca2df99c2c5897a32 132 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 4 129 1.5E-42 T 12-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 N288_24700 0e02b837a513c12ca2df99c2c5897a32 132 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 95 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 N288_24700 0e02b837a513c12ca2df99c2c5897a32 132 Gene3D G3DSA:3.40.140.10 1 128 7.6E-52 T 12-10-2018 N288_24700 0e02b837a513c12ca2df99c2c5897a32 132 SUPERFAMILY SSF53927 1 128 1.36E-44 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 N288_07385 6db778a9b9cf9deccf6735d038970ff7 779 Pfam PF16338 Domain of unknown function (DUF4968) 35 122 7.0E-15 T 12-10-2018 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 N288_07385 6db778a9b9cf9deccf6735d038970ff7 779 Gene3D G3DSA:3.20.20.80 238 589 1.2E-146 T 12-10-2018 N288_07385 6db778a9b9cf9deccf6735d038970ff7 779 Gene3D G3DSA:2.60.40.1180 590 667 1.2E-27 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_07385 6db778a9b9cf9deccf6735d038970ff7 779 ProSitePatterns PS00129 Glycosyl hydrolases family 31 active site. 401 408 - T 12-10-2018 IPR030458 Glycosyl hydrolases family 31, active site N288_07385 6db778a9b9cf9deccf6735d038970ff7 779 Pfam PF13802 Galactose mutarotase-like 146 212 7.4E-25 T 12-10-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain N288_07385 6db778a9b9cf9deccf6735d038970ff7 779 Gene3D G3DSA:2.60.40.1760 19 235 6.4E-50 T 12-10-2018 N288_07385 6db778a9b9cf9deccf6735d038970ff7 779 Pfam PF01055 Glycosyl hydrolases family 31 231 670 2.3E-165 T 12-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 N288_07385 6db778a9b9cf9deccf6735d038970ff7 779 SUPERFAMILY SSF51011 588 667 9.35E-26 T 12-10-2018 N288_07385 6db778a9b9cf9deccf6735d038970ff7 779 SUPERFAMILY SSF51445 239 586 1.44E-98 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_07385 6db778a9b9cf9deccf6735d038970ff7 779 Pfam PF17137 Domain of unknown function (DUF5110) 682 750 2.8E-15 T 12-10-2018 IPR033403 Domain of unknown function DUF5110 N288_07385 6db778a9b9cf9deccf6735d038970ff7 779 Gene3D G3DSA:2.60.40.1180 669 763 2.3E-12 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_07385 6db778a9b9cf9deccf6735d038970ff7 779 SUPERFAMILY SSF74650 7 238 2.86E-53 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 N288_01495 cf8b95e34562ced2315f0e0df1457735 196 Pfam PF01694 Rhomboid family 54 195 3.7E-37 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 N288_01495 cf8b95e34562ced2315f0e0df1457735 196 Gene3D G3DSA:1.20.1540.10 10 196 7.4E-42 T 12-10-2018 IPR035952 Rhomboid-like superfamily N288_01495 cf8b95e34562ced2315f0e0df1457735 196 SUPERFAMILY SSF144091 11 195 5.36E-42 T 12-10-2018 N288_04145 dbbd3ddedee3e47c2ad93c509b5b6ac0 307 SUPERFAMILY SSF52540 4 226 2.02E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_04145 dbbd3ddedee3e47c2ad93c509b5b6ac0 307 Gene3D G3DSA:3.40.50.300 2 235 6.6E-56 T 12-10-2018 N288_04145 dbbd3ddedee3e47c2ad93c509b5b6ac0 307 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_04145 dbbd3ddedee3e47c2ad93c509b5b6ac0 307 Pfam PF00005 ABC transporter 21 162 2.5E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_04145 dbbd3ddedee3e47c2ad93c509b5b6ac0 307 SMART SM00382 30 213 4.8E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_19630 9e3b96e11778daf39229d3b41e73148d 586 SUPERFAMILY SSF52009 466 583 8.37E-29 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 N288_19630 9e3b96e11778daf39229d3b41e73148d 586 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 473 6.6E-193 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 N288_19630 9e3b96e11778daf39229d3b41e73148d 586 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.4E-81 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 N288_19630 9e3b96e11778daf39229d3b41e73148d 586 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.4E-81 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 N288_19630 9e3b96e11778daf39229d3b41e73148d 586 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.4E-81 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 N288_19630 9e3b96e11778daf39229d3b41e73148d 586 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.4E-81 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 N288_19630 9e3b96e11778daf39229d3b41e73148d 586 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.4E-81 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 N288_19630 9e3b96e11778daf39229d3b41e73148d 586 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.4E-81 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 N288_19630 9e3b96e11778daf39229d3b41e73148d 586 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.4E-81 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 N288_19630 9e3b96e11778daf39229d3b41e73148d 586 Gene3D G3DSA:3.50.30.10 475 586 1.3E-34 T 12-10-2018 N288_19630 9e3b96e11778daf39229d3b41e73148d 586 Gene3D G3DSA:3.40.1380.20 340 474 1.8E-48 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 N288_19630 9e3b96e11778daf39229d3b41e73148d 586 SUPERFAMILY SSF51621 1 343 8.72E-105 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 N288_19630 9e3b96e11778daf39229d3b41e73148d 586 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 N288_19630 9e3b96e11778daf39229d3b41e73148d 586 Pfam PF02887 Pyruvate kinase, alpha/beta domain 358 471 2.3E-37 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 N288_19630 9e3b96e11778daf39229d3b41e73148d 586 SUPERFAMILY SSF50800 71 167 5.58E-26 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily N288_19630 9e3b96e11778daf39229d3b41e73148d 586 Gene3D G3DSA:2.40.33.10 71 167 7.6E-151 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 N288_19630 9e3b96e11778daf39229d3b41e73148d 586 Gene3D G3DSA:3.20.20.60 4 332 7.6E-151 T 12-10-2018 N288_19630 9e3b96e11778daf39229d3b41e73148d 586 Pfam PF00391 PEP-utilising enzyme, mobile domain 505 576 2.0E-20 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 N288_19630 9e3b96e11778daf39229d3b41e73148d 586 SUPERFAMILY SSF52935 323 474 3.79E-45 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 N288_19630 9e3b96e11778daf39229d3b41e73148d 586 Pfam PF00224 Pyruvate kinase, barrel domain 1 344 3.7E-159 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 N288_07405 b5e125e7b44b24135bfd57575c23c968 163 Pfam PF04461 Protein of unknown function (DUF520) 5 163 3.6E-63 T 12-10-2018 IPR007551 Protein of unknown function DUF520 N288_07405 b5e125e7b44b24135bfd57575c23c968 163 SUPERFAMILY SSF89963 6 90 3.66E-30 T 12-10-2018 IPR036183 YajQ-like superfamily N288_07405 b5e125e7b44b24135bfd57575c23c968 163 Gene3D G3DSA:3.30.70.990 12 101 1.1E-62 T 12-10-2018 IPR035570 UPF0234, N-terminal N288_07405 b5e125e7b44b24135bfd57575c23c968 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 163 26.947 T 12-10-2018 IPR007551 Protein of unknown function DUF520 N288_07405 b5e125e7b44b24135bfd57575c23c968 163 SUPERFAMILY SSF89963 92 163 3.14E-26 T 12-10-2018 IPR036183 YajQ-like superfamily N288_07405 b5e125e7b44b24135bfd57575c23c968 163 Gene3D G3DSA:3.30.70.860 6 163 1.1E-62 T 12-10-2018 IPR035571 UPF0234-like, C-terminal N288_15450 76bcc1c62238efd96b88d3d4b29c8d4f 261 Gene3D G3DSA:3.10.20.10 27 109 3.9E-14 T 12-10-2018 N288_15450 76bcc1c62238efd96b88d3d4b29c8d4f 261 PIRSF PIRSF015626 1 261 3.6E-76 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 N288_15450 76bcc1c62238efd96b88d3d4b29c8d4f 261 SUPERFAMILY SSF53927 4 258 3.61E-75 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 N288_15450 76bcc1c62238efd96b88d3d4b29c8d4f 261 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 22 259 3.9E-75 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 N288_15450 76bcc1c62238efd96b88d3d4b29c8d4f 261 Gene3D G3DSA:3.40.140.10 115 261 2.4E-47 T 12-10-2018 N288_15450 76bcc1c62238efd96b88d3d4b29c8d4f 261 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 1 259 31.881 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 N288_15450 76bcc1c62238efd96b88d3d4b29c8d4f 261 Pfam PF02634 FdhD/NarQ family 25 258 8.4E-74 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 286 3.4E-69 T 12-10-2018 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 3.4E-69 T 12-10-2018 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 3.4E-69 T 12-10-2018 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 3.4E-69 T 12-10-2018 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 3.4E-69 T 12-10-2018 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 415 430 3.4E-69 T 12-10-2018 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.4E-69 T 12-10-2018 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 3.4E-69 T 12-10-2018 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 437 457 3.4E-69 T 12-10-2018 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 SUPERFAMILY SSF55424 350 472 7.9E-41 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 462 1.7E-37 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 SUPERFAMILY SSF51905 3 343 1.65E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 Gene3D G3DSA:3.50.50.60 163 285 1.6E-114 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 PIRSF PIRSF000350 1 470 7.3E-86 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 472 1.7E-179 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 Gene3D G3DSA:3.50.50.60 5 339 1.6E-114 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 334 1.5E-63 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 Gene3D G3DSA:3.30.390.30 353 472 1.3E-46 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 1.2E-37 T 12-10-2018 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 1.2E-37 T 12-10-2018 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.2E-37 T 12-10-2018 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 1.2E-37 T 12-10-2018 N288_17735 f7ba7dc11d83779b72debd3f3124cec9 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 287 1.2E-37 T 12-10-2018 N288_15410 95497c520028a66e4e09390f5dd939b3 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 3.8E-27 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_15410 95497c520028a66e4e09390f5dd939b3 337 SMART SM00382 33 233 3.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_15410 95497c520028a66e4e09390f5dd939b3 337 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_15410 95497c520028a66e4e09390f5dd939b3 337 Pfam PF00005 ABC transporter 25 183 1.5E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_15410 95497c520028a66e4e09390f5dd939b3 337 Gene3D G3DSA:3.40.50.300 1 333 3.7E-103 T 12-10-2018 N288_15410 95497c520028a66e4e09390f5dd939b3 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 300 6.6E-21 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_15410 95497c520028a66e4e09390f5dd939b3 337 SUPERFAMILY SSF52540 4 254 2.84E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_11450 d59214443a6b0517097799e96503b1db 400 Pfam PF01391 Collagen triple helix repeat (20 copies) 342 399 1.2E-8 T 12-10-2018 IPR008160 Collagen triple helix repeat N288_11450 d59214443a6b0517097799e96503b1db 400 Pfam PF01391 Collagen triple helix repeat (20 copies) 300 358 1.1E-6 T 12-10-2018 IPR008160 Collagen triple helix repeat N288_11450 d59214443a6b0517097799e96503b1db 400 Pfam PF01391 Collagen triple helix repeat (20 copies) 119 174 6.3E-9 T 12-10-2018 IPR008160 Collagen triple helix repeat N288_00760 c1fa36768d7c3088968a8041f98796ed 276 PIRSF PIRSF002158 3 276 2.9E-100 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00760 c1fa36768d7c3088968a8041f98796ed 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.7E-33 T 12-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00760 c1fa36768d7c3088968a8041f98796ed 276 SUPERFAMILY SSF50249 2 125 2.09E-51 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_00760 c1fa36768d7c3088968a8041f98796ed 276 Gene3D G3DSA:2.30.30.30 118 196 3.7E-36 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 N288_00760 c1fa36768d7c3088968a8041f98796ed 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 50.046 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 N288_00760 c1fa36768d7c3088968a8041f98796ed 276 Gene3D G3DSA:2.40.50.140 1 114 8.5E-49 T 12-10-2018 N288_00760 c1fa36768d7c3088968a8041f98796ed 276 Gene3D G3DSA:4.10.950.10 197 276 3.0E-36 T 12-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00760 c1fa36768d7c3088968a8041f98796ed 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 276 8.6E-141 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 N288_00760 c1fa36768d7c3088968a8041f98796ed 276 SMART SM01382 124 253 1.7E-95 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 N288_00760 c1fa36768d7c3088968a8041f98796ed 276 SMART SM01383 42 118 1.1E-45 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00760 c1fa36768d7c3088968a8041f98796ed 276 SUPERFAMILY SSF50104 126 273 7.82E-62 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily N288_00760 c1fa36768d7c3088968a8041f98796ed 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 12-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00760 c1fa36768d7c3088968a8041f98796ed 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 3.4E-58 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 N288_11725 9926300f1079b53d35907efce5f6955f 144 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 122 9.2E-34 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 N288_11725 9926300f1079b53d35907efce5f6955f 144 Gene3D G3DSA:3.10.129.10 5 135 2.6E-36 T 12-10-2018 N288_11725 9926300f1079b53d35907efce5f6955f 144 PIRSF PIRSF003230 2 137 8.0E-32 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 N288_11725 9926300f1079b53d35907efce5f6955f 144 Pfam PF03061 Thioesterase superfamily 18 101 4.2E-14 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 N288_11725 9926300f1079b53d35907efce5f6955f 144 SUPERFAMILY SSF54637 4 133 9.54E-40 T 12-10-2018 IPR029069 HotDog domain superfamily N288_15215 d36ed1063ec6fa6a4a323fd2b04ee444 487 SUPERFAMILY SSF53474 44 255 9.06E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_15215 d36ed1063ec6fa6a4a323fd2b04ee444 487 Gene3D G3DSA:3.40.50.1820 46 269 5.4E-29 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_15695 381b16845d80b43d78fd031872cfbdfc 250 SUPERFAMILY SSF100950 74 227 4.29E-32 T 12-10-2018 IPR037171 NagB/RpiA transferase-like N288_15695 381b16845d80b43d78fd031872cfbdfc 250 SMART SM00420 6 58 6.2E-21 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 N288_15695 381b16845d80b43d78fd031872cfbdfc 250 Pfam PF00455 DeoR C terminal sensor domain 75 228 1.6E-46 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain N288_15695 381b16845d80b43d78fd031872cfbdfc 250 SUPERFAMILY SSF46785 5 63 3.64E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_15695 381b16845d80b43d78fd031872cfbdfc 250 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 9.2E-18 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 N288_15695 381b16845d80b43d78fd031872cfbdfc 250 Gene3D G3DSA:1.10.10.10 2 54 1.4E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_15695 381b16845d80b43d78fd031872cfbdfc 250 SMART SM01134 73 231 9.6E-65 T 12-10-2018 N288_15695 381b16845d80b43d78fd031872cfbdfc 250 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 N288_15695 381b16845d80b43d78fd031872cfbdfc 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.1E-8 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 N288_15695 381b16845d80b43d78fd031872cfbdfc 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.1E-8 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 N288_08215 0304670aa57e9680049ce373b25913ec 212 Gene3D G3DSA:2.40.10.420 179 212 4.6E-12 T 12-10-2018 N288_08215 0304670aa57e9680049ce373b25913ec 212 Pfam PF07486 Cell Wall Hydrolase 113 210 4.6E-26 T 12-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 N288_08215 0304670aa57e9680049ce373b25913ec 212 SMART SM00257 36 79 9.7E-12 T 12-10-2018 IPR018392 LysM domain N288_08215 0304670aa57e9680049ce373b25913ec 212 Gene3D G3DSA:1.10.10.2520 97 175 1.2E-28 T 12-10-2018 N288_08215 0304670aa57e9680049ce373b25913ec 212 Pfam PF01476 LysM domain 37 79 1.8E-11 T 12-10-2018 IPR018392 LysM domain N288_08215 0304670aa57e9680049ce373b25913ec 212 Gene3D G3DSA:3.10.350.10 24 94 1.6E-12 T 12-10-2018 IPR036779 LysM domain superfamily N288_08215 0304670aa57e9680049ce373b25913ec 212 SUPERFAMILY SSF54106 36 79 7.85E-8 T 12-10-2018 N288_07340 72c5b5cb349ee0c18052904c0f0dd17e 489 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 4 481 7.9E-116 T 12-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 N288_07340 72c5b5cb349ee0c18052904c0f0dd17e 489 Gene3D G3DSA:3.50.50.60 5 305 2.5E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_07340 72c5b5cb349ee0c18052904c0f0dd17e 489 Pfam PF01593 Flavin containing amine oxidoreductase 10 464 7.5E-28 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 N288_07340 72c5b5cb349ee0c18052904c0f0dd17e 489 SUPERFAMILY SSF51905 1 472 5.96E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_07340 72c5b5cb349ee0c18052904c0f0dd17e 489 Gene3D G3DSA:3.90.660.50 83 404 2.5E-29 T 12-10-2018 N288_22190 e4294b569e96474bd13f028d55a74a7e 668 Pfam PF09992 Phosphodiester glycosidase 230 399 5.8E-31 T 12-10-2018 IPR018711 Phosphodiester glycosidase N288_22190 e4294b569e96474bd13f028d55a74a7e 668 Pfam PF00395 S-layer homology domain 558 600 4.5E-11 T 12-10-2018 IPR001119 S-layer homology domain N288_22190 e4294b569e96474bd13f028d55a74a7e 668 Pfam PF00395 S-layer homology domain 496 539 8.3E-9 T 12-10-2018 IPR001119 S-layer homology domain N288_22190 e4294b569e96474bd13f028d55a74a7e 668 Pfam PF00395 S-layer homology domain 616 659 7.4E-10 T 12-10-2018 IPR001119 S-layer homology domain N288_18225 41a38f793b85a53a1c04671b564399e9 405 Gene3D G3DSA:1.20.1250.20 13 396 2.2E-21 T 12-10-2018 N288_18225 41a38f793b85a53a1c04671b564399e9 405 Pfam PF07690 Major Facilitator Superfamily 21 336 3.8E-19 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_18225 41a38f793b85a53a1c04671b564399e9 405 ProSitePatterns PS00217 Sugar transport proteins signature 2. 114 139 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_18225 41a38f793b85a53a1c04671b564399e9 405 SUPERFAMILY SSF103473 14 399 2.09E-28 T 12-10-2018 IPR036259 MFS transporter superfamily N288_20245 3714fde36a61bd7213f1e0919e52de41 650 Gene3D G3DSA:1.20.210.10 29 561 8.3E-189 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20245 3714fde36a61bd7213f1e0919e52de41 650 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 55 499 1.9E-136 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20245 3714fde36a61bd7213f1e0919e52de41 650 PRINTS PR01165 Cytochrome c oxidase subunit I signature 46 71 4.4E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20245 3714fde36a61bd7213f1e0919e52de41 650 PRINTS PR01165 Cytochrome c oxidase subunit I signature 223 242 4.4E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20245 3714fde36a61bd7213f1e0919e52de41 650 PRINTS PR01165 Cytochrome c oxidase subunit I signature 93 116 4.4E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20245 3714fde36a61bd7213f1e0919e52de41 650 PRINTS PR01165 Cytochrome c oxidase subunit I signature 457 478 4.4E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20245 3714fde36a61bd7213f1e0919e52de41 650 PRINTS PR01165 Cytochrome c oxidase subunit I signature 120 144 4.4E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20245 3714fde36a61bd7213f1e0919e52de41 650 PRINTS PR01165 Cytochrome c oxidase subunit I signature 162 174 4.4E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20245 3714fde36a61bd7213f1e0919e52de41 650 PRINTS PR01165 Cytochrome c oxidase subunit I signature 194 212 4.4E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20245 3714fde36a61bd7213f1e0919e52de41 650 PRINTS PR01165 Cytochrome c oxidase subunit I signature 274 295 4.4E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20245 3714fde36a61bd7213f1e0919e52de41 650 PRINTS PR01165 Cytochrome c oxidase subunit I signature 344 365 4.4E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20245 3714fde36a61bd7213f1e0919e52de41 650 PRINTS PR01165 Cytochrome c oxidase subunit I signature 320 335 4.4E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20245 3714fde36a61bd7213f1e0919e52de41 650 PRINTS PR01165 Cytochrome c oxidase subunit I signature 407 426 4.4E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20245 3714fde36a61bd7213f1e0919e52de41 650 PRINTS PR01165 Cytochrome c oxidase subunit I signature 379 397 4.4E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20245 3714fde36a61bd7213f1e0919e52de41 650 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 276 330 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20245 3714fde36a61bd7213f1e0919e52de41 650 TIGRFAM TIGR02882 QoxB: cytochrome aa3 quinol oxidase, subunit I 4 642 0.0 T 12-10-2018 IPR014233 Quinol oxidase subunit I GO:0005507|GO:0016021|GO:0016682|GO:0020037|GO:0055114 N288_20245 3714fde36a61bd7213f1e0919e52de41 650 SUPERFAMILY SSF81442 44 553 1.57E-168 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_11050 ca2091d75740589ecffb5770be578afb 71 Gene3D G3DSA:1.10.260.40 1 65 2.6E-28 T 12-10-2018 N288_11050 ca2091d75740589ecffb5770be578afb 71 SMART SM00530 4 59 1.1E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_11050 ca2091d75740589ecffb5770be578afb 71 SUPERFAMILY SSF47413 2 64 6.44E-19 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_11050 ca2091d75740589ecffb5770be578afb 71 Pfam PF01381 Helix-turn-helix 5 57 6.6E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_23720 9f457ddcde6885900b0d4d44f5051684 70 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 13 68 1.0E-24 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 N288_23720 9f457ddcde6885900b0d4d44f5051684 70 Gene3D G3DSA:1.20.20.10 1 70 1.1E-29 T 12-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23720 9f457ddcde6885900b0d4d44f5051684 70 SUPERFAMILY SSF81333 3 68 7.19E-20 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily N288_23720 9f457ddcde6885900b0d4d44f5051684 70 PRINTS PR00124 ATP synthase C subunit signature 43 68 1.0E-20 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23720 9f457ddcde6885900b0d4d44f5051684 70 PRINTS PR00124 ATP synthase C subunit signature 26 41 1.0E-20 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23720 9f457ddcde6885900b0d4d44f5051684 70 PRINTS PR00124 ATP synthase C subunit signature 5 24 1.0E-20 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23720 9f457ddcde6885900b0d4d44f5051684 70 Pfam PF00137 ATP synthase subunit C 4 66 5.0E-15 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 N288_23720 9f457ddcde6885900b0d4d44f5051684 70 Hamap MF_01396 ATP synthase subunit c [atpH]. 3 68 16.511 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23720 9f457ddcde6885900b0d4d44f5051684 70 ProSitePatterns PS00605 ATP synthase c subunit signature. 33 54 - T 12-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_22730 b9d5d7f799ab577aa456fc5a216d9ad8 120 Gene3D G3DSA:2.40.33.40 1 120 6.5E-35 T 12-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 N288_22730 b9d5d7f799ab577aa456fc5a216d9ad8 120 SUPERFAMILY SSF141530 4 119 1.57E-38 T 12-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 N288_22730 b9d5d7f799ab577aa456fc5a216d9ad8 120 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 116 1.2E-40 T 12-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 N288_22730 b9d5d7f799ab577aa456fc5a216d9ad8 120 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 7 117 4.0E-31 T 12-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 N288_12020 499849588fa5203805f749519fc6c267 860 Gene3D G3DSA:1.20.272.40 659 696 4.1E-103 T 12-10-2018 N288_12020 499849588fa5203805f749519fc6c267 860 Gene3D G3DSA:3.40.50.300 514 658 4.1E-103 T 12-10-2018 N288_12020 499849588fa5203805f749519fc6c267 860 SMART SM00490 545 634 1.1E-20 T 12-10-2018 IPR001650 Helicase, C-terminal N288_12020 499849588fa5203805f749519fc6c267 860 SUPERFAMILY SSF52540 374 644 6.43E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_12020 499849588fa5203805f749519fc6c267 860 Gene3D G3DSA:3.40.50.300 374 513 4.1E-103 T 12-10-2018 N288_12020 499849588fa5203805f749519fc6c267 860 Pfam PF00271 Helicase conserved C-terminal domain 529 634 2.0E-13 T 12-10-2018 IPR001650 Helicase, C-terminal N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 SMART SM00388 1487 1554 3.4E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 SUPERFAMILY SSF47384 1473 1555 6.28E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 Gene3D G3DSA:3.40.50.300 294 360 2.1E-5 T 12-10-2018 N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 SUPERFAMILY SSF52540 300 574 9.14E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1700 1713 8.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1642 1656 8.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1676 1694 8.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 Gene3D G3DSA:3.30.450.40 1283 1471 3.8E-26 T 12-10-2018 IPR029016 GAF-like domain superfamily N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 Pfam PF00069 Protein kinase domain 26 260 2.7E-24 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 SUPERFAMILY SSF55874 1544 1716 9.17E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 Pfam PF01590 GAF domain 1308 1447 2.2E-10 T 12-10-2018 IPR003018 GAF domain GO:0005515 N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 SMART SM00220 22 270 9.1E-11 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 SUPERFAMILY SSF55781 1294 1462 3.71E-21 T 12-10-2018 N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 SUPERFAMILY SSF56112 26 267 2.74E-37 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 Pfam PF13191 AAA ATPase domain 301 477 6.4E-35 T 12-10-2018 N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 SMART SM00065 1307 1457 8.8E-10 T 12-10-2018 IPR003018 GAF domain GO:0005515 N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1488 1554 7.9E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 Gene3D G3DSA:1.10.510.10 24 293 1.1E-32 T 12-10-2018 N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 Gene3D G3DSA:1.10.287.130 1473 1554 5.1E-17 T 12-10-2018 N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 SMART SM00387 1604 1716 2.8E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 Gene3D G3DSA:3.30.565.10 1555 1716 3.1E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 SUPERFAMILY SSF48452 746 854 2.78E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_13080 c6929516c25a01bf77a10e10a771cb9b 1722 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1605 1713 1.7E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_25905 09469aeabc13dfcb0fc322cc282344bf 454 Pfam PF03796 DnaB-like helicase C terminal domain 185 440 2.5E-119 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 N288_25905 09469aeabc13dfcb0fc322cc282344bf 454 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 9 442 1.1E-186 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 N288_25905 09469aeabc13dfcb0fc322cc282344bf 454 SUPERFAMILY SSF48024 8 119 8.5E-37 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 N288_25905 09469aeabc13dfcb0fc322cc282344bf 454 SUPERFAMILY SSF52540 183 433 2.44E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_25905 09469aeabc13dfcb0fc322cc282344bf 454 Gene3D G3DSA:3.40.50.300 167 454 7.3E-120 T 12-10-2018 N288_25905 09469aeabc13dfcb0fc322cc282344bf 454 Gene3D G3DSA:1.10.860.10 1 166 1.8E-64 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal N288_25905 09469aeabc13dfcb0fc322cc282344bf 454 Pfam PF00772 DnaB-like helicase N terminal domain 10 111 1.4E-34 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 N288_21540 badd58ac75abc70cdad0f02cc8e01ccb 108 SUPERFAMILY SSF52833 4 105 1.83E-24 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_21540 badd58ac75abc70cdad0f02cc8e01ccb 108 Gene3D G3DSA:3.40.30.10 1 105 6.0E-23 T 12-10-2018 N288_21540 badd58ac75abc70cdad0f02cc8e01ccb 108 Pfam PF00085 Thioredoxin 6 92 1.5E-17 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 N288_18895 c6c31d60a58194dc86fbbdec4f08f609 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 342 47.934 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 N288_18895 c6c31d60a58194dc86fbbdec4f08f609 342 Gene3D G3DSA:3.40.1780.10 14 341 7.1E-139 T 12-10-2018 N288_18895 c6c31d60a58194dc86fbbdec4f08f609 342 SUPERFAMILY SSF111337 1 342 4.84E-142 T 12-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 N288_18895 c6c31d60a58194dc86fbbdec4f08f609 342 Gene3D G3DSA:2.40.10.240 64 162 7.1E-139 T 12-10-2018 N288_18895 c6c31d60a58194dc86fbbdec4f08f609 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 342 1.5E-150 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 N288_18895 c6c31d60a58194dc86fbbdec4f08f609 342 Pfam PF02547 Queuosine biosynthesis protein 4 341 4.0E-146 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 N288_08420 67f14a4dff46f4610cc67687ba2e2ab3 78 SUPERFAMILY SSF140500 6 57 5.23E-14 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 N288_08420 67f14a4dff46f4610cc67687ba2e2ab3 78 Pfam PF09388 Spo0E like sporulation regulatory protein 8 48 4.4E-14 T 12-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 N288_08420 67f14a4dff46f4610cc67687ba2e2ab3 78 Gene3D G3DSA:1.20.58.990 5 62 2.9E-12 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 N288_17710 44785a574ffa8958d1d890f0e0e05ec5 731 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 41 560 5.4E-266 T 12-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 N288_17710 44785a574ffa8958d1d890f0e0e05ec5 731 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 594 722 7.4E-61 T 12-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 N288_17710 44785a574ffa8958d1d890f0e0e05ec5 731 Pfam PF02310 B12 binding domain 597 708 8.0E-15 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 N288_17710 44785a574ffa8958d1d890f0e0e05ec5 731 Pfam PF01642 Methylmalonyl-CoA mutase 42 552 4.3E-236 T 12-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 N288_17710 44785a574ffa8958d1d890f0e0e05ec5 731 Gene3D G3DSA:3.40.50.280 561 724 2.9E-54 T 12-10-2018 N288_17710 44785a574ffa8958d1d890f0e0e05ec5 731 SUPERFAMILY SSF52242 561 724 2.22E-58 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 N288_17710 44785a574ffa8958d1d890f0e0e05ec5 731 SUPERFAMILY SSF51703 23 552 4.19E-220 T 12-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 N288_17710 44785a574ffa8958d1d890f0e0e05ec5 731 Gene3D G3DSA:3.20.20.240 41 557 5.3E-239 T 12-10-2018 N288_22435 8a9a8a666fba29170ccfe11c820977e1 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 162 1.2E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22435 8a9a8a666fba29170ccfe11c820977e1 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 193 1.2E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22435 8a9a8a666fba29170ccfe11c820977e1 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 1.2E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22435 8a9a8a666fba29170ccfe11c820977e1 278 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 161 189 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_22435 8a9a8a666fba29170ccfe11c820977e1 278 SUPERFAMILY SSF51735 9 274 9.94E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_22435 8a9a8a666fba29170ccfe11c820977e1 278 Gene3D G3DSA:3.40.50.720 3 278 4.1E-78 T 12-10-2018 N288_22435 8a9a8a666fba29170ccfe11c820977e1 278 Pfam PF00106 short chain dehydrogenase 11 215 5.3E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22435 8a9a8a666fba29170ccfe11c820977e1 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 2.2E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22435 8a9a8a666fba29170ccfe11c820977e1 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 193 2.2E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22435 8a9a8a666fba29170ccfe11c820977e1 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.2E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22435 8a9a8a666fba29170ccfe11c820977e1 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 164 2.2E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22435 8a9a8a666fba29170ccfe11c820977e1 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 235 255 2.2E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22435 8a9a8a666fba29170ccfe11c820977e1 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 212 2.2E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_06990 96de2398e9b582b672ad80f939f1b12b 170 SUPERFAMILY SSF54909 66 143 1.39E-25 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel N288_06990 96de2398e9b582b672ad80f939f1b12b 170 Gene3D G3DSA:3.30.70.3430 1 168 1.4E-70 T 12-10-2018 N288_06990 96de2398e9b582b672ad80f939f1b12b 170 Pfam PF03992 Antibiotic biosynthesis monooxygenase 66 140 3.4E-18 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain N288_00630 046dd1a13640fea2d4a42c2b3f27d3a1 485 Gene3D G3DSA:3.40.50.620 1 332 6.2E-143 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_00630 046dd1a13640fea2d4a42c2b3f27d3a1 485 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 323 8.8E-124 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 N288_00630 046dd1a13640fea2d4a42c2b3f27d3a1 485 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_00630 046dd1a13640fea2d4a42c2b3f27d3a1 485 SUPERFAMILY SSF52374 5 316 9.12E-114 T 12-10-2018 N288_00630 046dd1a13640fea2d4a42c2b3f27d3a1 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 4.7E-28 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 N288_00630 046dd1a13640fea2d4a42c2b3f27d3a1 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 218 4.7E-28 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 N288_00630 046dd1a13640fea2d4a42c2b3f27d3a1 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 4.7E-28 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 N288_00630 046dd1a13640fea2d4a42c2b3f27d3a1 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 4.7E-28 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 N288_00630 046dd1a13640fea2d4a42c2b3f27d3a1 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 204 4.7E-28 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 N288_00630 046dd1a13640fea2d4a42c2b3f27d3a1 485 SUPERFAMILY SSF48163 298 481 1.57E-48 T 12-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 N288_00630 046dd1a13640fea2d4a42c2b3f27d3a1 485 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 484 33.796 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 N288_00630 046dd1a13640fea2d4a42c2b3f27d3a1 485 Gene3D G3DSA:1.10.10.350 390 485 9.5E-33 T 12-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 N288_00630 046dd1a13640fea2d4a42c2b3f27d3a1 485 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 481 3.7E-189 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 N288_10755 6af8b5e5a36dfae87b14d2c56875fec0 313 Pfam PF01095 Pectinesterase 13 287 1.5E-56 T 12-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 N288_10755 6af8b5e5a36dfae87b14d2c56875fec0 313 Gene3D G3DSA:2.160.20.10 9 313 2.4E-105 T 12-10-2018 IPR012334 Pectin lyase fold N288_10755 6af8b5e5a36dfae87b14d2c56875fec0 313 ProSitePatterns PS00800 Pectinesterase signature 1. 37 56 - T 12-10-2018 IPR018040 Pectinesterase, Tyr active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 N288_10755 6af8b5e5a36dfae87b14d2c56875fec0 313 ProSitePatterns PS00503 Pectinesterase signature 2. 166 175 - T 12-10-2018 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 N288_10755 6af8b5e5a36dfae87b14d2c56875fec0 313 SUPERFAMILY SSF51126 12 299 1.49E-74 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor N288_14370 b30857b1a62b521590b0ba80180f3314 389 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 4 319 1.7E-15 T 12-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase N288_14370 b30857b1a62b521590b0ba80180f3314 389 SUPERFAMILY SSF51905 188 383 4.78E-7 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_14370 b30857b1a62b521590b0ba80180f3314 389 SUPERFAMILY SSF51905 3 226 4.92E-16 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_14370 b30857b1a62b521590b0ba80180f3314 389 Gene3D G3DSA:3.50.50.60 2 389 9.3E-18 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_13950 2ff6a85765a73a679eb3c71db81b8324 131 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 2.7E-36 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR N288_13950 2ff6a85765a73a679eb3c71db81b8324 131 SUPERFAMILY SSF52833 1 128 1.0E-38 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_13950 2ff6a85765a73a679eb3c71db81b8324 131 Pfam PF03960 ArsC family 27 113 3.2E-23 T 12-10-2018 IPR006660 Arsenate reductase-like N288_13950 2ff6a85765a73a679eb3c71db81b8324 131 Gene3D G3DSA:3.40.30.10 1 120 2.4E-46 T 12-10-2018 N288_13950 2ff6a85765a73a679eb3c71db81b8324 131 Hamap MF_01132 Regulatory protein Spx [spxA]. 1 131 35.69 T 12-10-2018 IPR023731 Regulatory protein Spx GO:0045892 N288_08795 a7771dc529dc90a722dfa6915a452577 445 SUPERFAMILY SSF51230 3 91 5.76E-26 T 12-10-2018 IPR011053 Single hybrid motif N288_08795 a7771dc529dc90a722dfa6915a452577 445 Gene3D G3DSA:3.30.559.10 197 441 8.0E-92 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 N288_08795 a7771dc529dc90a722dfa6915a452577 445 Pfam PF02817 e3 binding domain 141 176 4.1E-15 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 N288_08795 a7771dc529dc90a722dfa6915a452577 445 Pfam PF00364 Biotin-requiring enzyme 4 75 1.7E-24 T 12-10-2018 IPR000089 Biotin/lipoyl attachment N288_08795 a7771dc529dc90a722dfa6915a452577 445 SUPERFAMILY SSF47005 135 181 3.14E-13 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 N288_08795 a7771dc529dc90a722dfa6915a452577 445 Gene3D G3DSA:4.10.320.10 131 183 7.4E-21 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 N288_08795 a7771dc529dc90a722dfa6915a452577 445 SUPERFAMILY SSF52777 203 443 1.25E-89 T 12-10-2018 N288_08795 a7771dc529dc90a722dfa6915a452577 445 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 N288_08795 a7771dc529dc90a722dfa6915a452577 445 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 215 443 2.6E-90 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 N288_08795 a7771dc529dc90a722dfa6915a452577 445 Gene3D G3DSA:2.40.50.100 2 81 5.0E-27 T 12-10-2018 N288_16930 341baff5029af724f3898babefe261ce 266 SUPERFAMILY SSF55347 129 237 1.11E-39 T 12-10-2018 N288_16930 341baff5029af724f3898babefe261ce 266 Gene3D G3DSA:3.40.50.720 5 263 6.2E-78 T 12-10-2018 N288_16930 341baff5029af724f3898babefe261ce 266 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 12-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 N288_16930 341baff5029af724f3898babefe261ce 266 Gene3D G3DSA:3.30.360.10 130 235 6.2E-78 T 12-10-2018 N288_16930 341baff5029af724f3898babefe261ce 266 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 4 266 29.662 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 N288_16930 341baff5029af724f3898babefe261ce 266 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 4 128 1.9E-32 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 N288_16930 341baff5029af724f3898babefe261ce 266 PIRSF PIRSF000161 2 266 3.1E-69 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 N288_16930 341baff5029af724f3898babefe261ce 266 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 131 264 1.0E-33 T 12-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 N288_16930 341baff5029af724f3898babefe261ce 266 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 4 266 3.7E-88 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 N288_16930 341baff5029af724f3898babefe261ce 266 SUPERFAMILY SSF51735 3 155 1.01E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_23465 7389c3f03642064b108fbdc295ca647a 189 SMART SM01321 9 123 9.2E-27 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 N288_23465 7389c3f03642064b108fbdc295ca647a 189 SUPERFAMILY SSF143422 4 125 6.93E-24 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 N288_23465 7389c3f03642064b108fbdc295ca647a 189 Gene3D G3DSA:3.30.70.1290 1 159 1.0E-34 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 N288_23465 7389c3f03642064b108fbdc295ca647a 189 Pfam PF01797 Transposase IS200 like 12 121 3.4E-12 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 N288_19470 d19ccfb405abd62f57fb0b390153cb5d 361 Gene3D G3DSA:3.40.630.10 12 345 7.2E-136 T 12-10-2018 N288_19470 d19ccfb405abd62f57fb0b390153cb5d 361 SUPERFAMILY SSF53187 6 357 1.79E-71 T 12-10-2018 N288_19470 d19ccfb405abd62f57fb0b390153cb5d 361 Gene3D G3DSA:2.40.30.40 77 164 7.2E-136 T 12-10-2018 IPR023367 Peptidase M42, domain 2 N288_19470 d19ccfb405abd62f57fb0b390153cb5d 361 PIRSF PIRSF001123 4 361 3.0E-148 T 12-10-2018 IPR008007 Peptidase M42 N288_19470 d19ccfb405abd62f57fb0b390153cb5d 361 Pfam PF05343 M42 glutamyl aminopeptidase 48 342 2.0E-115 T 12-10-2018 IPR008007 Peptidase M42 N288_19470 d19ccfb405abd62f57fb0b390153cb5d 361 SUPERFAMILY SSF101821 73 182 2.44E-34 T 12-10-2018 N288_24110 1f481f6ef11655a0928611f95a3e0043 154 Pfam PF02391 MoaE protein 5 116 3.2E-36 T 12-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 N288_24110 1f481f6ef11655a0928611f95a3e0043 154 SUPERFAMILY SSF54690 4 136 1.31E-45 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 N288_24110 1f481f6ef11655a0928611f95a3e0043 154 Gene3D G3DSA:3.90.1170.40 1 143 2.9E-52 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 N288_15900 8f03cbcb7a1d58700df33d78497deb18 281 PIRSF PIRSF006493 1 281 5.1E-105 T 12-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type N288_15900 8f03cbcb7a1d58700df33d78497deb18 281 Pfam PF02735 Ku70/Ku80 beta-barrel domain 11 191 3.3E-40 T 12-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 N288_15900 8f03cbcb7a1d58700df33d78497deb18 281 SMART SM00559 52 181 2.0E-46 T 12-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 N288_15900 8f03cbcb7a1d58700df33d78497deb18 281 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 1 254 33.291 T 12-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type N288_15900 8f03cbcb7a1d58700df33d78497deb18 281 SUPERFAMILY SSF100939 2 259 1.39E-54 T 12-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily N288_15900 8f03cbcb7a1d58700df33d78497deb18 281 Gene3D G3DSA:2.40.290.10 2 174 8.6E-20 T 12-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily N288_15900 8f03cbcb7a1d58700df33d78497deb18 281 TIGRFAM TIGR02772 Ku_bact: Ku protein 1 256 5.2E-95 T 12-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type N288_25390 92ed75c71a07e23f1829e2bc64ca6c70 706 SUPERFAMILY SSF82866 165 351 2.49E-31 T 12-10-2018 N288_25390 92ed75c71a07e23f1829e2bc64ca6c70 706 Pfam PF03176 MMPL family 465 693 1.1E-41 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 N288_25390 92ed75c71a07e23f1829e2bc64ca6c70 706 Pfam PF03176 MMPL family 49 378 1.8E-60 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 N288_25390 92ed75c71a07e23f1829e2bc64ca6c70 706 Gene3D G3DSA:1.20.1640.10 153 350 1.3E-8 T 12-10-2018 N288_25390 92ed75c71a07e23f1829e2bc64ca6c70 706 SUPERFAMILY SSF82866 516 697 4.32E-23 T 12-10-2018 N288_15520 aaee36495b8283857da8f8fe192bf37f 291 SUPERFAMILY SSF56317 3 271 3.14E-57 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily N288_15520 aaee36495b8283857da8f8fe192bf37f 291 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 12-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site N288_15520 aaee36495b8283857da8f8fe192bf37f 291 Pfam PF00795 Carbon-nitrogen hydrolase 4 265 2.7E-28 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 N288_15520 aaee36495b8283857da8f8fe192bf37f 291 Gene3D G3DSA:3.60.110.10 1 285 8.8E-59 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily N288_14780 d9805e7bdfab07a680f137f01024ff41 451 Pfam PF00860 Permease family 25 395 9.4E-74 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 N288_13740 5b5b72594b241ff5f7348b105b6c1a78 176 SUPERFAMILY SSF88659 110 168 1.68E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_13740 5b5b72594b241ff5f7348b105b6c1a78 176 Gene3D G3DSA:1.10.1740.10 2 113 1.4E-18 T 12-10-2018 N288_13740 5b5b72594b241ff5f7348b105b6c1a78 176 SUPERFAMILY SSF88946 6 97 1.1E-16 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_13740 5b5b72594b241ff5f7348b105b6c1a78 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 167 5.7E-23 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_13740 5b5b72594b241ff5f7348b105b6c1a78 176 Pfam PF04542 Sigma-70 region 2 27 93 1.9E-9 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_13740 5b5b72594b241ff5f7348b105b6c1a78 176 Gene3D G3DSA:1.10.10.10 114 168 2.2E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_13740 5b5b72594b241ff5f7348b105b6c1a78 176 Pfam PF08281 Sigma-70, region 4 112 161 4.4E-14 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_17725 2eff1c80d3cbb805bbf06542ae3e8353 327 Gene3D G3DSA:3.40.50.920 193 327 4.1E-41 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 N288_17725 2eff1c80d3cbb805bbf06542ae3e8353 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 8.3E-53 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain N288_17725 2eff1c80d3cbb805bbf06542ae3e8353 327 Gene3D G3DSA:3.40.50.970 1 192 9.2E-94 T 12-10-2018 N288_17725 2eff1c80d3cbb805bbf06542ae3e8353 327 Pfam PF02780 Transketolase, C-terminal domain 194 317 1.9E-40 T 12-10-2018 IPR033248 Transketolase, C-terminal domain N288_17725 2eff1c80d3cbb805bbf06542ae3e8353 327 SUPERFAMILY SSF52922 188 325 1.15E-39 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 N288_17725 2eff1c80d3cbb805bbf06542ae3e8353 327 SUPERFAMILY SSF52518 2 204 2.9E-74 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_17725 2eff1c80d3cbb805bbf06542ae3e8353 327 SMART SM00861 4 179 8.6E-72 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain N288_07505 15487688ecf17ea8cbaaffe7ca721ed0 318 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 16 317 2.6E-129 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 N288_07505 15487688ecf17ea8cbaaffe7ca721ed0 318 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 61 68 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 N288_07505 15487688ecf17ea8cbaaffe7ca721ed0 318 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 271 280 2.5E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 N288_07505 15487688ecf17ea8cbaaffe7ca721ed0 318 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 61 80 2.5E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 N288_07505 15487688ecf17ea8cbaaffe7ca721ed0 318 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 143 154 2.5E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 N288_07505 15487688ecf17ea8cbaaffe7ca721ed0 318 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 283 306 2.5E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 N288_07505 15487688ecf17ea8cbaaffe7ca721ed0 318 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 16 156 4.8E-52 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 N288_07505 15487688ecf17ea8cbaaffe7ca721ed0 318 PRINTS PR00102 Ornithine carbamoyltransferase signature 132 146 2.7E-30 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 N288_07505 15487688ecf17ea8cbaaffe7ca721ed0 318 PRINTS PR00102 Ornithine carbamoyltransferase signature 92 105 2.7E-30 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 N288_07505 15487688ecf17ea8cbaaffe7ca721ed0 318 PRINTS PR00102 Ornithine carbamoyltransferase signature 297 308 2.7E-30 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 N288_07505 15487688ecf17ea8cbaaffe7ca721ed0 318 PRINTS PR00102 Ornithine carbamoyltransferase signature 59 73 2.7E-30 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 N288_07505 15487688ecf17ea8cbaaffe7ca721ed0 318 PRINTS PR00102 Ornithine carbamoyltransferase signature 235 245 2.7E-30 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 N288_07505 15487688ecf17ea8cbaaffe7ca721ed0 318 Gene3D G3DSA:3.40.50.1370 146 305 3.3E-122 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 N288_07505 15487688ecf17ea8cbaaffe7ca721ed0 318 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 162 315 7.9E-56 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 N288_07505 15487688ecf17ea8cbaaffe7ca721ed0 318 Gene3D G3DSA:3.40.50.1370 17 314 3.3E-122 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 N288_07505 15487688ecf17ea8cbaaffe7ca721ed0 318 SUPERFAMILY SSF53671 13 318 1.44E-108 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 N288_07505 15487688ecf17ea8cbaaffe7ca721ed0 318 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 15 318 78.431 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 N288_13700 3705fada207bf0a60784310c5d4dc64f 566 Gene3D G3DSA:3.40.50.2000 166 365 1.1E-64 T 12-10-2018 N288_13700 3705fada207bf0a60784310c5d4dc64f 566 SUPERFAMILY SSF53756 2 377 1.37E-68 T 12-10-2018 N288_13700 3705fada207bf0a60784310c5d4dc64f 566 Pfam PF13439 Glycosyltransferase Family 4 36 169 1.9E-7 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 N288_13700 3705fada207bf0a60784310c5d4dc64f 566 Gene3D G3DSA:3.40.50.2000 14 165 1.1E-64 T 12-10-2018 N288_13700 3705fada207bf0a60784310c5d4dc64f 566 Pfam PF00534 Glycosyl transferases group 1 183 357 1.9E-35 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 N288_23050 4bf02e1ad49a5d3a88f7c56ecc66b534 272 Gene3D G3DSA:1.10.3720.10 2 263 8.8E-75 T 12-10-2018 IPR035906 MetI-like superfamily N288_23050 4bf02e1ad49a5d3a88f7c56ecc66b534 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 263 1.6E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_23050 4bf02e1ad49a5d3a88f7c56ecc66b534 272 SUPERFAMILY SSF161098 4 271 5.98E-80 T 12-10-2018 IPR035906 MetI-like superfamily N288_22975 1a2e40c7746d52569399bf9b3adaff9e 155 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 3 144 2.4E-41 T 12-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 N288_22975 1a2e40c7746d52569399bf9b3adaff9e 155 SUPERFAMILY SSF89623 1 144 5.49E-48 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 N288_22975 1a2e40c7746d52569399bf9b3adaff9e 155 Pfam PF02502 Ribose/Galactose Isomerase 3 141 1.2E-45 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 N288_22975 1a2e40c7746d52569399bf9b3adaff9e 155 Gene3D G3DSA:3.40.1400.10 1 155 4.9E-51 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 N288_22975 1a2e40c7746d52569399bf9b3adaff9e 155 PIRSF PIRSF005384 1 148 7.0E-49 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 N288_22975 1a2e40c7746d52569399bf9b3adaff9e 155 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 145 1.1E-41 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 N288_06405 cfd9b20c520eebd8f9f7930e763af759 403 Gene3D G3DSA:1.20.1250.20 216 402 6.2E-27 T 12-10-2018 N288_06405 cfd9b20c520eebd8f9f7930e763af759 403 Gene3D G3DSA:1.20.1250.20 6 193 2.0E-36 T 12-10-2018 N288_06405 cfd9b20c520eebd8f9f7930e763af759 403 Pfam PF07690 Major Facilitator Superfamily 15 277 2.4E-35 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_06405 cfd9b20c520eebd8f9f7930e763af759 403 PRINTS PR01035 Tetracycline resistance protein signature 82 106 2.6E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 N288_06405 cfd9b20c520eebd8f9f7930e763af759 403 PRINTS PR01035 Tetracycline resistance protein signature 109 130 2.6E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 N288_06405 cfd9b20c520eebd8f9f7930e763af759 403 PRINTS PR01035 Tetracycline resistance protein signature 51 70 2.6E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 N288_06405 cfd9b20c520eebd8f9f7930e763af759 403 PRINTS PR01035 Tetracycline resistance protein signature 139 161 2.6E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 N288_06405 cfd9b20c520eebd8f9f7930e763af759 403 PRINTS PR01035 Tetracycline resistance protein signature 343 366 2.6E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 N288_06405 cfd9b20c520eebd8f9f7930e763af759 403 SUPERFAMILY SSF103473 1 396 1.2E-69 T 12-10-2018 IPR036259 MFS transporter superfamily N288_13060 701a9603ee472ac023884e03ddfd2b41 325 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 139 160 - T 12-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 N288_13060 701a9603ee472ac023884e03ddfd2b41 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 88 2.4E-9 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 N288_13060 701a9603ee472ac023884e03ddfd2b41 325 SUPERFAMILY SSF50129 1 144 5.33E-37 T 12-10-2018 IPR011032 GroES-like superfamily N288_13060 701a9603ee472ac023884e03ddfd2b41 325 Gene3D G3DSA:3.40.50.720 122 267 7.0E-102 T 12-10-2018 N288_13060 701a9603ee472ac023884e03ddfd2b41 325 Gene3D G3DSA:3.90.180.10 11 318 7.0E-102 T 12-10-2018 N288_13060 701a9603ee472ac023884e03ddfd2b41 325 Pfam PF00107 Zinc-binding dehydrogenase 150 269 2.8E-26 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 N288_13060 701a9603ee472ac023884e03ddfd2b41 325 SMART SM00829 10 322 9.8E-60 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 N288_13060 701a9603ee472ac023884e03ddfd2b41 325 SUPERFAMILY SSF51735 111 275 1.97E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_15720 9b060f422050c9f9cd58a9c7653d992d 330 PRINTS PR00116 Arginase signature 242 271 3.3E-6 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 N288_15720 9b060f422050c9f9cd58a9c7653d992d 330 PRINTS PR00116 Arginase signature 126 141 3.3E-6 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 N288_15720 9b060f422050c9f9cd58a9c7653d992d 330 Gene3D G3DSA:3.40.800.10 26 322 1.4E-66 T 12-10-2018 N288_15720 9b060f422050c9f9cd58a9c7653d992d 330 SUPERFAMILY SSF52768 25 316 6.12E-58 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily N288_15720 9b060f422050c9f9cd58a9c7653d992d 330 Pfam PF00491 Arginase family 39 314 2.1E-53 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 N288_15720 9b060f422050c9f9cd58a9c7653d992d 330 PIRSF PIRSF036979 18 319 4.7E-39 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 N288_09910 e701adb4916f3dc1298204b1ec1003ff 370 Pfam PF01548 Transposase 8 152 7.0E-18 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 N288_09910 e701adb4916f3dc1298204b1ec1003ff 370 Pfam PF02371 Transposase IS116/IS110/IS902 family 223 297 8.7E-25 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 N288_00340 e317971d4c72a74f1267a0b7b638afe5 211 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 5 92 1.0E-20 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 N288_00340 e317971d4c72a74f1267a0b7b638afe5 211 SUPERFAMILY SSF50715 2 186 1.01E-51 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 N288_00340 e317971d4c72a74f1267a0b7b638afe5 211 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 5 179 3.1E-53 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 N288_00340 e317971d4c72a74f1267a0b7b638afe5 211 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 3 182 24.965 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 N288_00340 e317971d4c72a74f1267a0b7b638afe5 211 Gene3D G3DSA:2.40.240.10 2 94 1.3E-24 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 N288_00340 e317971d4c72a74f1267a0b7b638afe5 211 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 182 3.3E-26 T 12-10-2018 IPR020057 Ribosomal protein L25, beta domain N288_00340 e317971d4c72a74f1267a0b7b638afe5 211 Pfam PF01386 Ribosomal L25p family 5 91 3.7E-21 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 N288_00340 e317971d4c72a74f1267a0b7b638afe5 211 Gene3D G3DSA:2.170.120.20 97 189 9.2E-27 T 12-10-2018 IPR037121 Ribosomal protein L25, C-terminal N288_17015 acf003b96d2fbf44322d805d1ad15091 121 PIRSF PIRSF005965 1 121 4.0E-50 T 12-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 N288_17015 acf003b96d2fbf44322d805d1ad15091 121 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 2 118 1.7E-45 T 12-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 N288_17015 acf003b96d2fbf44322d805d1ad15091 121 Gene3D G3DSA:3.30.1330.40 1 121 1.0E-48 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 N288_17015 acf003b96d2fbf44322d805d1ad15091 121 Pfam PF07736 Chorismate mutase type I 2 118 7.3E-47 T 12-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 N288_17015 acf003b96d2fbf44322d805d1ad15091 121 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 8 118 1.0E-28 T 12-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 N288_17015 acf003b96d2fbf44322d805d1ad15091 121 SUPERFAMILY SSF55298 1 119 3.53E-46 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 N288_14985 aba3995b83c35dad1c16885894831986 322 Pfam PF07582 AP endonuclease family 2 C terminus 268 322 4.0E-22 T 12-10-2018 IPR011418 AP endonuclease, family 2, C-terminal N288_14985 aba3995b83c35dad1c16885894831986 322 Gene3D G3DSA:3.20.20.150 1 315 2.1E-73 T 12-10-2018 N288_14985 aba3995b83c35dad1c16885894831986 322 SUPERFAMILY SSF51658 1 311 2.75E-52 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily N288_14985 aba3995b83c35dad1c16885894831986 322 Pfam PF01261 Xylose isomerase-like TIM barrel 20 236 1.4E-31 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain N288_05135 50823979822af1eb4dd1ca99602dc680 264 Gene3D G3DSA:3.40.50.1820 1 263 3.0E-74 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_05135 50823979822af1eb4dd1ca99602dc680 264 SUPERFAMILY SSF53474 3 256 1.74E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_05135 50823979822af1eb4dd1ca99602dc680 264 Pfam PF00756 Putative esterase 10 255 1.6E-26 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 N288_10485 6ebb34a5601b54416c0e7a7f7013705f 564 Gene3D G3DSA:1.10.1370.30 1 564 1.1E-208 T 12-10-2018 N288_10485 6ebb34a5601b54416c0e7a7f7013705f 564 TIGRFAM TIGR02289 M3_not_pepF: oligoendopeptidase, M3 family 13 560 4.0E-212 T 12-10-2018 IPR011976 Peptidase M3B, oligoendopeptidase-related N288_10485 6ebb34a5601b54416c0e7a7f7013705f 564 Pfam PF01432 Peptidase family M3 166 269 4.9E-5 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 N288_10485 6ebb34a5601b54416c0e7a7f7013705f 564 Pfam PF01432 Peptidase family M3 308 545 2.1E-20 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 N288_10485 6ebb34a5601b54416c0e7a7f7013705f 564 SUPERFAMILY SSF55486 35 559 1.14E-116 T 12-10-2018 N288_01830 1ba5e9a8d1aa0a5e2f4767c1868ea909 475 SUPERFAMILY SSF55931 4 293 4.58E-122 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 N288_01830 1ba5e9a8d1aa0a5e2f4767c1868ea909 475 SUPERFAMILY SSF89095 294 398 3.92E-37 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 N288_01830 1ba5e9a8d1aa0a5e2f4767c1868ea909 475 Pfam PF02637 GatB domain 325 472 2.8E-55 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 N288_01830 1ba5e9a8d1aa0a5e2f4767c1868ea909 475 Gene3D G3DSA:1.10.10.410 412 475 4.8E-25 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal N288_01830 1ba5e9a8d1aa0a5e2f4767c1868ea909 475 Gene3D G3DSA:1.10.150.380 297 410 9.8E-40 T 12-10-2018 N288_01830 1ba5e9a8d1aa0a5e2f4767c1868ea909 475 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 471 9.7E-179 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 N288_01830 1ba5e9a8d1aa0a5e2f4767c1868ea909 475 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 141 155 - T 12-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 N288_01830 1ba5e9a8d1aa0a5e2f4767c1868ea909 475 Pfam PF02934 GatB/GatE catalytic domain 5 284 2.1E-112 T 12-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 N288_01830 1ba5e9a8d1aa0a5e2f4767c1868ea909 475 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 473 38.787 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 N288_01830 1ba5e9a8d1aa0a5e2f4767c1868ea909 475 SMART SM00845 325 472 6.0E-80 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 N288_06035 bed94ed0ec62f165f4df567299c473d6 272 SUPERFAMILY SSF51735 3 159 1.92E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_06035 bed94ed0ec62f165f4df567299c473d6 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 7.2E-22 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal N288_06035 bed94ed0ec62f165f4df567299c473d6 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 N288_06035 bed94ed0ec62f165f4df567299c473d6 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 27.839 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 N288_06035 bed94ed0ec62f165f4df567299c473d6 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 266 4.3E-88 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 N288_06035 bed94ed0ec62f165f4df567299c473d6 272 Gene3D G3DSA:3.40.50.720 1 164 1.1E-51 T 12-10-2018 N288_06035 bed94ed0ec62f165f4df567299c473d6 272 PIRSF PIRSF000193 2 269 9.1E-86 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 N288_06035 bed94ed0ec62f165f4df567299c473d6 272 Gene3D G3DSA:1.10.3730.10 165 268 2.2E-39 T 12-10-2018 N288_06035 bed94ed0ec62f165f4df567299c473d6 272 SUPERFAMILY SSF48179 161 269 2.89E-37 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_06035 bed94ed0ec62f165f4df567299c473d6 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 266 2.7E-39 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 SMART SM00052 696 942 7.7E-100 T 12-10-2018 IPR001633 EAL domain N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 Pfam PF07238 PilZ domain 966 1073 2.2E-7 T 12-10-2018 IPR009875 PilZ domain GO:0035438 N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 Pfam PF00563 EAL domain 702 937 9.4E-71 T 12-10-2018 IPR001633 EAL domain N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 SMART SM00091 272 340 0.08 T 12-10-2018 IPR000014 PAS domain N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 SMART SM00091 400 469 1.8E-4 T 12-10-2018 IPR000014 PAS domain N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 SMART SM00091 25 91 9.8E-6 T 12-10-2018 IPR000014 PAS domain N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 SMART SM00091 149 214 8.4E-6 T 12-10-2018 IPR000014 PAS domain N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 SUPERFAMILY SSF55073 532 687 5.34E-48 T 12-10-2018 IPR029787 Nucleotide cyclase N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 SUPERFAMILY SSF55785 20 135 4.54E-18 T 12-10-2018 IPR035965 PAS domain superfamily N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 SMART SM00086 474 516 1.8E-6 T 12-10-2018 IPR001610 PAC motif N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 SMART SM00086 346 388 4.9E-9 T 12-10-2018 IPR001610 PAC motif N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 SMART SM00086 219 260 0.42 T 12-10-2018 IPR001610 PAC motif N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 SMART SM00086 96 137 0.001 T 12-10-2018 IPR001610 PAC motif N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 Gene3D G3DSA:3.20.20.450 699 948 2.1E-92 T 12-10-2018 IPR035919 EAL domain superfamily N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 397 522 2.5E-16 T 12-10-2018 IPR000014 PAS domain N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 26 144 1.1E-16 T 12-10-2018 IPR000014 PAS domain N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 147 267 3.6E-16 T 12-10-2018 IPR000014 PAS domain N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 294 395 2.7E-8 T 12-10-2018 IPR000014 PAS domain N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 SUPERFAMILY SSF141868 701 950 5.1E-83 T 12-10-2018 IPR035919 EAL domain superfamily N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 Gene3D G3DSA:2.10.70.100 343 390 4.8E-12 T 12-10-2018 N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 Gene3D G3DSA:3.30.450.20 21 137 9.6E-19 T 12-10-2018 N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 SUPERFAMILY SSF55785 257 386 6.93E-22 T 12-10-2018 IPR035965 PAS domain superfamily N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 SMART SM00267 516 686 5.8E-65 T 12-10-2018 IPR000160 GGDEF domain N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 Gene3D G3DSA:3.30.450.20 391 514 1.9E-28 T 12-10-2018 N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 524 685 4.8E-43 T 12-10-2018 IPR000160 GGDEF domain N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 Gene3D G3DSA:3.30.70.270 521 698 1.2E-60 T 12-10-2018 N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 Pfam PF08447 PAS fold 425 510 4.6E-18 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 Pfam PF08447 PAS fold 295 381 5.3E-20 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 Pfam PF08447 PAS fold 48 130 1.9E-9 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 SUPERFAMILY SSF55785 406 519 1.93E-21 T 12-10-2018 IPR035965 PAS domain superfamily N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 Gene3D G3DSA:3.30.450.20 138 258 5.0E-19 T 12-10-2018 N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 Pfam PF00990 Diguanylate cyclase, GGDEF domain 527 681 6.2E-47 T 12-10-2018 IPR000160 GGDEF domain N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 Gene3D G3DSA:3.30.450.20 268 339 4.6E-19 T 12-10-2018 N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 SUPERFAMILY SSF55785 141 258 8.55E-19 T 12-10-2018 IPR035965 PAS domain superfamily N288_03720 02b0b878dadfbe07550eb71e21432d5d 1102 Pfam PF13426 PAS domain 160 259 1.1E-9 T 12-10-2018 IPR000014 PAS domain N288_06360 ab3043d12bdb1a3d266286118bca7d00 204 SUPERFAMILY SSF56112 21 175 2.74E-11 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_15675 9220ec78d03bcc1d057de99a1d705caf 265 SUPERFAMILY SSF158430 125 258 2.35E-41 T 12-10-2018 N288_15675 9220ec78d03bcc1d057de99a1d705caf 265 Gene3D G3DSA:1.20.1260.120 1 265 3.2E-95 T 12-10-2018 N288_15675 9220ec78d03bcc1d057de99a1d705caf 265 Pfam PF11155 Domain of unknown function (DUF2935) 127 245 7.1E-29 T 12-10-2018 IPR021328 Protein of unknown function DUF2935 N288_15675 9220ec78d03bcc1d057de99a1d705caf 265 Pfam PF11155 Domain of unknown function (DUF2935) 10 114 7.6E-20 T 12-10-2018 IPR021328 Protein of unknown function DUF2935 N288_15675 9220ec78d03bcc1d057de99a1d705caf 265 SUPERFAMILY SSF158430 5 123 8.11E-34 T 12-10-2018 N288_03580 b8f737fc3e7b87f774a167f0371033e0 123 SUPERFAMILY SSF52833 1 122 3.16E-30 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_03580 b8f737fc3e7b87f774a167f0371033e0 123 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 91 117 2.3E-6 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 N288_03580 b8f737fc3e7b87f774a167f0371033e0 123 Pfam PF00578 AhpC/TSA family 2 70 5.7E-13 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 N288_03580 b8f737fc3e7b87f774a167f0371033e0 123 Gene3D G3DSA:3.40.30.10 1 122 5.0E-36 T 12-10-2018 N288_12905 fb73060145394a4e444c901a20e56170 214 SUPERFAMILY SSF51735 1 205 2.54E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_12905 fb73060145394a4e444c901a20e56170 214 Pfam PF13460 NAD(P)H-binding 7 189 9.6E-48 T 12-10-2018 IPR016040 NAD(P)-binding domain N288_12905 fb73060145394a4e444c901a20e56170 214 Gene3D G3DSA:3.40.50.720 1 214 9.1E-63 T 12-10-2018 N288_07625 ae3ecda73f5746d6c81b8818cd97fd95 305 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 28 80 1.4E-17 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain N288_07625 ae3ecda73f5746d6c81b8818cd97fd95 305 Gene3D G3DSA:1.10.3720.10 92 305 4.4E-22 T 12-10-2018 IPR035906 MetI-like superfamily N288_07625 ae3ecda73f5746d6c81b8818cd97fd95 305 SUPERFAMILY SSF161098 99 304 9.42E-28 T 12-10-2018 IPR035906 MetI-like superfamily N288_07625 ae3ecda73f5746d6c81b8818cd97fd95 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 305 5.5E-31 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_17995 f8c0cbb8c8c9eccd05fc8629add83dd4 562 Pfam PF00176 SNF2 family N-terminal domain 79 319 1.2E-35 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 N288_17995 f8c0cbb8c8c9eccd05fc8629add83dd4 562 SUPERFAMILY SSF52540 18 243 2.82E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_17995 f8c0cbb8c8c9eccd05fc8629add83dd4 562 Gene3D G3DSA:3.40.50.10810 62 261 8.2E-42 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily N288_17995 f8c0cbb8c8c9eccd05fc8629add83dd4 562 Gene3D G3DSA:3.40.50.300 271 552 7.6E-51 T 12-10-2018 N288_17995 f8c0cbb8c8c9eccd05fc8629add83dd4 562 Pfam PF00271 Helicase conserved C-terminal domain 360 466 5.7E-21 T 12-10-2018 IPR001650 Helicase, C-terminal N288_17995 f8c0cbb8c8c9eccd05fc8629add83dd4 562 SMART SM00487 56 236 1.9E-29 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_17995 f8c0cbb8c8c9eccd05fc8629add83dd4 562 SUPERFAMILY SSF52540 168 520 8.32E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_17995 f8c0cbb8c8c9eccd05fc8629add83dd4 562 SMART SM00490 386 466 1.8E-20 T 12-10-2018 IPR001650 Helicase, C-terminal N288_19755 599955c4084fc02270dfe974cbbea91d 395 PIRSF PIRSF000722 1 395 4.1E-152 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_19755 599955c4084fc02270dfe974cbbea91d 395 TIGRFAM TIGR00016 ackA: acetate kinase 2 394 9.0E-179 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_19755 599955c4084fc02270dfe974cbbea91d 395 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_19755 599955c4084fc02270dfe974cbbea91d 395 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_19755 599955c4084fc02270dfe974cbbea91d 395 Gene3D G3DSA:3.30.420.40 2 194 1.1E-76 T 12-10-2018 N288_19755 599955c4084fc02270dfe974cbbea91d 395 SUPERFAMILY SSF53067 3 194 4.27E-72 T 12-10-2018 N288_19755 599955c4084fc02270dfe974cbbea91d 395 Gene3D G3DSA:3.30.420.40 195 395 1.6E-81 T 12-10-2018 N288_19755 599955c4084fc02270dfe974cbbea91d 395 Hamap MF_00020 Acetate kinase [ackA]. 1 395 196.689 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_19755 599955c4084fc02270dfe974cbbea91d 395 SUPERFAMILY SSF53067 158 393 1.77E-92 T 12-10-2018 N288_19755 599955c4084fc02270dfe974cbbea91d 395 Pfam PF00871 Acetokinase family 3 388 6.2E-173 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_19755 599955c4084fc02270dfe974cbbea91d 395 PRINTS PR00471 Acetate kinase family signature 321 337 3.1E-48 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_19755 599955c4084fc02270dfe974cbbea91d 395 PRINTS PR00471 Acetate kinase family signature 375 387 3.1E-48 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_19755 599955c4084fc02270dfe974cbbea91d 395 PRINTS PR00471 Acetate kinase family signature 299 312 3.1E-48 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_19755 599955c4084fc02270dfe974cbbea91d 395 PRINTS PR00471 Acetate kinase family signature 4 15 3.1E-48 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_19755 599955c4084fc02270dfe974cbbea91d 395 PRINTS PR00471 Acetate kinase family signature 202 223 3.1E-48 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_19755 599955c4084fc02270dfe974cbbea91d 395 PRINTS PR00471 Acetate kinase family signature 172 185 3.1E-48 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 N288_00215 54f32dd12d780d0b2566352354782f29 146 Gene3D G3DSA:1.20.120.490 25 146 5.9E-39 T 12-10-2018 IPR024042 TM1646-like domain superfamily N288_00215 54f32dd12d780d0b2566352354782f29 146 Pfam PF03885 Protein of unknown function (DUF327) 9 145 9.1E-40 T 12-10-2018 IPR005585 Protein of unknown function DUF327 N288_00215 54f32dd12d780d0b2566352354782f29 146 SUPERFAMILY SSF158397 28 146 2.35E-35 T 12-10-2018 IPR024042 TM1646-like domain superfamily N288_00085 f5c8976ffcfe68857f054d979b747b1f 449 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 284 1.6E-86 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 N288_00085 f5c8976ffcfe68857f054d979b747b1f 449 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 310 419 6.2E-19 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 N288_00085 f5c8976ffcfe68857f054d979b747b1f 449 Gene3D G3DSA:3.40.710.10 27 310 2.5E-91 T 12-10-2018 N288_00085 f5c8976ffcfe68857f054d979b747b1f 449 Gene3D G3DSA:2.60.410.10 312 419 1.9E-18 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 N288_00085 f5c8976ffcfe68857f054d979b747b1f 449 SUPERFAMILY SSF69189 302 400 3.53E-17 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 N288_00085 f5c8976ffcfe68857f054d979b747b1f 449 SMART SM00936 310 419 3.1E-16 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 N288_00085 f5c8976ffcfe68857f054d979b747b1f 449 SUPERFAMILY SSF56601 10 310 3.71E-78 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_00085 f5c8976ffcfe68857f054d979b747b1f 449 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 3.7E-15 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 N288_00085 f5c8976ffcfe68857f054d979b747b1f 449 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 3.7E-15 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 N288_00085 f5c8976ffcfe68857f054d979b747b1f 449 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 3.7E-15 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 N288_09600 f66f53b181856eaa3d5f5edf91b70369 114 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09600 f66f53b181856eaa3d5f5edf91b70369 114 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09600 f66f53b181856eaa3d5f5edf91b70369 114 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09600 f66f53b181856eaa3d5f5edf91b70369 114 Gene3D G3DSA:2.30.30.790 3 114 2.5E-14 T 12-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09600 f66f53b181856eaa3d5f5edf91b70369 114 SUPERFAMILY SSF50104 1 113 1.1E-47 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily N288_09600 f66f53b181856eaa3d5f5edf91b70369 114 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 5.5E-51 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09600 f66f53b181856eaa3d5f5edf91b70369 114 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 12-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_09600 f66f53b181856eaa3d5f5edf91b70369 114 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 32.366 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09600 f66f53b181856eaa3d5f5edf91b70369 114 PIRSF PIRSF002191 1 114 1.2E-49 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09600 f66f53b181856eaa3d5f5edf91b70369 114 Pfam PF01245 Ribosomal protein L19 4 112 4.8E-53 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_04925 7bd9bc4f0fc587a91fab933faa5b60c3 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 525 1.4E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_04925 7bd9bc4f0fc587a91fab933faa5b60c3 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 1.4E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_04925 7bd9bc4f0fc587a91fab933faa5b60c3 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 1.4E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_04925 7bd9bc4f0fc587a91fab933faa5b60c3 533 Pfam PF00989 PAS fold 214 313 1.2E-10 T 12-10-2018 IPR013767 PAS fold GO:0006355 N288_04925 7bd9bc4f0fc587a91fab933faa5b60c3 533 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 323 374 6.6E-10 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain N288_04925 7bd9bc4f0fc587a91fab933faa5b60c3 533 Gene3D G3DSA:3.30.450.20 31 172 4.0E-45 T 12-10-2018 N288_04925 7bd9bc4f0fc587a91fab933faa5b60c3 533 SMART SM00387 420 528 8.3E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_04925 7bd9bc4f0fc587a91fab933faa5b60c3 533 SUPERFAMILY SSF103190 38 167 2.86E-38 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily N288_04925 7bd9bc4f0fc587a91fab933faa5b60c3 533 Pfam PF17203 Single cache domain 3 37 170 3.5E-25 T 12-10-2018 IPR033463 Single cache domain 3 N288_04925 7bd9bc4f0fc587a91fab933faa5b60c3 533 Gene3D G3DSA:3.30.450.20 200 315 1.5E-23 T 12-10-2018 N288_04925 7bd9bc4f0fc587a91fab933faa5b60c3 533 SUPERFAMILY SSF55785 217 309 2.47E-7 T 12-10-2018 IPR035965 PAS domain superfamily N288_04925 7bd9bc4f0fc587a91fab933faa5b60c3 533 SUPERFAMILY SSF55874 416 526 2.36E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_04925 7bd9bc4f0fc587a91fab933faa5b60c3 533 Gene3D G3DSA:3.30.565.10 377 525 4.3E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_04925 7bd9bc4f0fc587a91fab933faa5b60c3 533 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 526 2.6E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_04925 7bd9bc4f0fc587a91fab933faa5b60c3 533 SMART SM00091 213 281 1.5E-5 T 12-10-2018 IPR000014 PAS domain N288_04925 7bd9bc4f0fc587a91fab933faa5b60c3 533 SUPERFAMILY SSF55890 324 392 3.79E-13 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 N288_23485 87858393cde24ce2d93a9e519f4549f8 942 Gene3D G3DSA:1.20.120.850 712 935 1.1E-90 T 12-10-2018 N288_23485 87858393cde24ce2d93a9e519f4549f8 942 SMART SM00487 471 657 8.3E-29 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_23485 87858393cde24ce2d93a9e519f4549f8 942 SMART SM00490 803 886 2.8E-24 T 12-10-2018 IPR001650 Helicase, C-terminal N288_23485 87858393cde24ce2d93a9e519f4549f8 942 Pfam PF12419 SNF2 Helicase protein 291 421 3.8E-37 T 12-10-2018 IPR022138 Helicase SWF/SNF-related N288_23485 87858393cde24ce2d93a9e519f4549f8 942 Gene3D G3DSA:3.40.50.10810 476 689 2.4E-68 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily N288_23485 87858393cde24ce2d93a9e519f4549f8 942 Pfam PF00271 Helicase conserved C-terminal domain 776 886 9.5E-22 T 12-10-2018 IPR001650 Helicase, C-terminal N288_23485 87858393cde24ce2d93a9e519f4549f8 942 Pfam PF00176 SNF2 family N-terminal domain 488 758 4.4E-60 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 N288_23485 87858393cde24ce2d93a9e519f4549f8 942 SUPERFAMILY SSF52540 692 940 2.86E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_23485 87858393cde24ce2d93a9e519f4549f8 942 Gene3D G3DSA:3.40.50.300 698 900 1.1E-90 T 12-10-2018 N288_23485 87858393cde24ce2d93a9e519f4549f8 942 SUPERFAMILY SSF52540 450 688 5.46E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_18320 f26ae404e54b7498a96af75bbe6fc2ef 371 Gene3D G3DSA:3.40.1390.30 3 125 2.7E-40 T 12-10-2018 N288_18320 f26ae404e54b7498a96af75bbe6fc2ef 371 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 348 1.2E-84 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 N288_18320 f26ae404e54b7498a96af75bbe6fc2ef 371 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 4 365 1.8E-89 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 N288_18320 f26ae404e54b7498a96af75bbe6fc2ef 371 Gene3D G3DSA:3.40.1390.30 235 333 1.2E-15 T 12-10-2018 N288_18320 f26ae404e54b7498a96af75bbe6fc2ef 371 SUPERFAMILY SSF102705 5 370 1.96E-134 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily N288_18320 f26ae404e54b7498a96af75bbe6fc2ef 371 PIRSF PIRSF037489 2 371 3.9E-155 T 12-10-2018 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria N288_18320 f26ae404e54b7498a96af75bbe6fc2ef 371 Gene3D G3DSA:3.30.70.120 132 234 1.6E-39 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal N288_21165 83c63d5cfbb2bcd191035551cb61f2b4 438 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 11 426 9.8E-140 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 N288_21165 83c63d5cfbb2bcd191035551cb61f2b4 438 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 9 426 1.5E-195 T 12-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 N288_21165 83c63d5cfbb2bcd191035551cb61f2b4 438 Gene3D G3DSA:3.40.640.10 8 290 8.0E-102 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_21165 83c63d5cfbb2bcd191035551cb61f2b4 438 SUPERFAMILY SSF53383 8 426 4.87E-125 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_21165 83c63d5cfbb2bcd191035551cb61f2b4 438 Gene3D G3DSA:3.90.1150.10 294 436 1.5E-47 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_21165 83c63d5cfbb2bcd191035551cb61f2b4 438 PIRSF PIRSF001434 1 429 2.3E-125 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 N288_02295 75f20146f29f5195d8a9a9eb27e14732 186 Gene3D G3DSA:2.160.10.10 1 185 1.4E-73 T 12-10-2018 N288_02295 75f20146f29f5195d8a9a9eb27e14732 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 165 3.9E-10 T 12-10-2018 IPR001451 Hexapeptide repeat N288_02295 75f20146f29f5195d8a9a9eb27e14732 186 SMART SM01266 5 59 1.1E-23 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 N288_02295 75f20146f29f5195d8a9a9eb27e14732 186 SUPERFAMILY SSF51161 3 184 1.52E-55 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily N288_02295 75f20146f29f5195d8a9a9eb27e14732 186 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 N288_02295 75f20146f29f5195d8a9a9eb27e14732 186 Pfam PF12464 Maltose acetyltransferase 7 58 2.8E-19 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 N288_16315 0cd98acb794a1d9a884b39758a5442fe 328 SUPERFAMILY SSF53590 4 319 1.27E-77 T 12-10-2018 IPR036452 Ribonucleoside hydrolase-like N288_16315 0cd98acb794a1d9a884b39758a5442fe 328 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 6 311 4.9E-62 T 12-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain N288_16315 0cd98acb794a1d9a884b39758a5442fe 328 Gene3D G3DSA:3.90.245.10 1 321 1.3E-71 T 12-10-2018 IPR036452 Ribonucleoside hydrolase-like N288_07710 26aa596d2e170b0948bd393183c7af17 198 SMART SM01118 6 194 3.5E-23 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 N288_07710 26aa596d2e170b0948bd393183c7af17 198 Pfam PF01928 CYTH domain 7 188 5.0E-34 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 N288_07710 26aa596d2e170b0948bd393183c7af17 198 PIRSF PIRSF012526 3 195 3.8E-69 T 12-10-2018 IPR009195 Uncharacterised protein family YjbK N288_07710 26aa596d2e170b0948bd393183c7af17 198 Gene3D G3DSA:2.40.320.10 2 193 3.6E-54 T 12-10-2018 N288_07710 26aa596d2e170b0948bd393183c7af17 198 SUPERFAMILY SSF55154 6 192 2.78E-33 T 12-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 N288_07805 98bd281462b2ef4b2f472a058cc0d6c8 402 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 247 395 2.9E-36 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 N288_07805 98bd281462b2ef4b2f472a058cc0d6c8 402 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 130 3.5E-17 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 N288_07805 98bd281462b2ef4b2f472a058cc0d6c8 402 SUPERFAMILY SSF56645 1 260 3.66E-71 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 N288_07805 98bd281462b2ef4b2f472a058cc0d6c8 402 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 134 229 3.3E-22 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 N288_07805 98bd281462b2ef4b2f472a058cc0d6c8 402 Gene3D G3DSA:1.20.140.10 248 402 3.1E-41 T 12-10-2018 N288_07805 98bd281462b2ef4b2f472a058cc0d6c8 402 Gene3D G3DSA:2.40.110.10 133 247 9.9E-50 T 12-10-2018 N288_07805 98bd281462b2ef4b2f472a058cc0d6c8 402 SUPERFAMILY SSF47203 245 400 1.32E-45 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 N288_07805 98bd281462b2ef4b2f472a058cc0d6c8 402 Gene3D G3DSA:1.10.540.10 1 132 2.1E-57 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 N288_01065 927072a91dbfd4727859b28b2cabe2f4 600 Pfam PF13522 Glutamine amidotransferase domain 62 191 2.1E-22 T 12-10-2018 N288_01065 927072a91dbfd4727859b28b2cabe2f4 600 SUPERFAMILY SSF53697 244 600 1.02E-92 T 12-10-2018 N288_01065 927072a91dbfd4727859b28b2cabe2f4 600 Gene3D G3DSA:3.40.50.10490 445 600 2.7E-61 T 12-10-2018 N288_01065 927072a91dbfd4727859b28b2cabe2f4 600 Pfam PF01380 SIS domain 288 413 3.2E-33 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 N288_01065 927072a91dbfd4727859b28b2cabe2f4 600 Pfam PF01380 SIS domain 457 582 2.0E-18 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 N288_01065 927072a91dbfd4727859b28b2cabe2f4 600 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 600 38.677 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 N288_01065 927072a91dbfd4727859b28b2cabe2f4 600 Gene3D G3DSA:3.60.20.10 2 239 1.8E-73 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_01065 927072a91dbfd4727859b28b2cabe2f4 600 Gene3D G3DSA:3.40.50.10490 243 442 2.3E-62 T 12-10-2018 N288_01065 927072a91dbfd4727859b28b2cabe2f4 600 SUPERFAMILY SSF56235 2 234 1.12E-65 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_01065 927072a91dbfd4727859b28b2cabe2f4 600 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 600 3.3E-226 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 N288_09425 31ddefad8c95bcc470e4942bf0e6f5b9 362 SUPERFAMILY SSF102114 99 311 3.27E-14 T 12-10-2018 N288_09425 31ddefad8c95bcc470e4942bf0e6f5b9 362 Pfam PF13394 4Fe-4S single cluster domain 124 230 1.3E-5 T 12-10-2018 N288_09425 31ddefad8c95bcc470e4942bf0e6f5b9 362 Gene3D G3DSA:3.20.20.70 80 343 1.2E-99 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_09425 31ddefad8c95bcc470e4942bf0e6f5b9 362 PIRSF PIRSF006004 8 362 2.9E-139 T 12-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 N288_09425 31ddefad8c95bcc470e4942bf0e6f5b9 362 Gene3D G3DSA:1.10.150.530 1 77 1.3E-23 T 12-10-2018 N288_09425 31ddefad8c95bcc470e4942bf0e6f5b9 362 Pfam PF04055 Radical SAM superfamily 119 289 4.6E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 N288_09425 31ddefad8c95bcc470e4942bf0e6f5b9 362 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 16 358 73.715 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 N288_09425 31ddefad8c95bcc470e4942bf0e6f5b9 362 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 13 362 3.8E-166 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 N288_08230 b0cfadd40fe76c75df8edab7c2458e41 467 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 N288_08230 b0cfadd40fe76c75df8edab7c2458e41 467 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 3 460 7.9E-171 T 12-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 N288_08230 b0cfadd40fe76c75df8edab7c2458e41 467 Pfam PF02378 Phosphotransferase system, EIIC 112 405 6.1E-47 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 N288_08230 b0cfadd40fe76c75df8edab7c2458e41 467 Gene3D G3DSA:3.30.1360.60 1 79 4.4E-30 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 N288_08230 b0cfadd40fe76c75df8edab7c2458e41 467 SUPERFAMILY SSF55604 7 82 5.89E-22 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 N288_08230 b0cfadd40fe76c75df8edab7c2458e41 467 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 29 111 1.4E-22 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 N288_08230 b0cfadd40fe76c75df8edab7c2458e41 467 Pfam PF00367 phosphotransferase system, EIIB 10 42 2.5E-16 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 N288_08230 b0cfadd40fe76c75df8edab7c2458e41 467 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 461 1.3E-206 T 12-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 N288_13120 f2e435b138e594d725a955e4cda52ebb 180 Gene3D G3DSA:3.40.50.850 1 175 3.0E-38 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 N288_13120 f2e435b138e594d725a955e4cda52ebb 180 Pfam PF00857 Isochorismatase family 3 143 9.1E-33 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 N288_13120 f2e435b138e594d725a955e4cda52ebb 180 SUPERFAMILY SSF52499 3 165 1.57E-39 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 N288_24170 a58c27b2b5362ad7a23477d8cd37705d 342 Pfam PF12698 ABC-2 family transporter protein 18 333 2.4E-39 T 12-10-2018 N288_04850 543749b8ed91a7fee27b1b3c93e51251 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 314 1.8E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_04850 543749b8ed91a7fee27b1b3c93e51251 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 300 1.8E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_04850 543749b8ed91a7fee27b1b3c93e51251 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 358 1.8E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_04850 543749b8ed91a7fee27b1b3c93e51251 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 339 1.8E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_04850 543749b8ed91a7fee27b1b3c93e51251 361 SMART SM00387 248 361 1.1E-35 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_04850 543749b8ed91a7fee27b1b3c93e51251 361 SUPERFAMILY SSF158472 75 123 4.05E-10 T 12-10-2018 N288_04850 543749b8ed91a7fee27b1b3c93e51251 361 Gene3D G3DSA:1.20.1480.50 44 128 1.9E-17 T 12-10-2018 N288_04850 543749b8ed91a7fee27b1b3c93e51251 361 Pfam PF00672 HAMP domain 74 122 2.3E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_04850 543749b8ed91a7fee27b1b3c93e51251 361 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 249 359 5.8E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_04850 543749b8ed91a7fee27b1b3c93e51251 361 SUPERFAMILY SSF47384 121 201 1.67E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_04850 543749b8ed91a7fee27b1b3c93e51251 361 SMART SM00304 74 126 2.3E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_04850 543749b8ed91a7fee27b1b3c93e51251 361 SMART SM00388 134 201 3.0E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_04850 543749b8ed91a7fee27b1b3c93e51251 361 SUPERFAMILY SSF55874 190 358 2.36E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_04850 543749b8ed91a7fee27b1b3c93e51251 361 Pfam PF00512 His Kinase A (phospho-acceptor) domain 135 199 4.4E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_04850 543749b8ed91a7fee27b1b3c93e51251 361 Gene3D G3DSA:1.10.287.130 129 201 9.9E-20 T 12-10-2018 N288_04850 543749b8ed91a7fee27b1b3c93e51251 361 Gene3D G3DSA:3.30.565.10 207 361 5.6E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_06185 e82d9caa162cdb3cc7aedb6fa857637e 173 SUPERFAMILY SSF58113 23 95 4.32E-5 T 12-10-2018 N288_06185 e82d9caa162cdb3cc7aedb6fa857637e 173 Gene3D G3DSA:1.10.287.700 20 97 3.9E-6 T 12-10-2018 N288_07950 88b7b81add4e579d9a91e731f5207e5f 274 Gene3D G3DSA:3.30.1360.130 210 274 5.3E-30 T 12-10-2018 N288_07950 88b7b81add4e579d9a91e731f5207e5f 274 SUPERFAMILY SSF63992 1 274 7.72E-100 T 12-10-2018 IPR036177 Peptidase M55, D-aminopeptidase superfamily N288_07950 88b7b81add4e579d9a91e731f5207e5f 274 Pfam PF04951 D-aminopeptidase 1 262 2.3E-92 T 12-10-2018 IPR007035 Peptidase M55, D-aminopeptidase N288_07950 88b7b81add4e579d9a91e731f5207e5f 274 PIRSF PIRSF015853 1 271 2.5E-104 T 12-10-2018 IPR007035 Peptidase M55, D-aminopeptidase N288_07950 88b7b81add4e579d9a91e731f5207e5f 274 Gene3D G3DSA:3.40.50.10780 1 209 2.1E-74 T 12-10-2018 IPR027476 D-aminopeptidase, N-terminal N288_05635 c1f89a150f4cdd35c6d9ccba63017d17 57 Pfam PF08176 Small acid-soluble spore protein K family 1 47 8.8E-30 T 12-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 N288_05635 c1f89a150f4cdd35c6d9ccba63017d17 57 TIGRFAM TIGR03091 SASP_sspK: small, acid-soluble spore protein K 16 46 1.1E-22 T 12-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 N288_05635 c1f89a150f4cdd35c6d9ccba63017d17 57 Hamap MF_01504 Small, acid-soluble spore protein K [sspK]. 1 49 19.394 T 12-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 N288_21240 c4e7603a3ab6b5b25047303564f093db 86 ProDom PD065427 YUSU IG COIL COILED BH3491 1 78 8.0E-23 T 12-10-2018 IPR020393 Uncharacterised protein family YusU N288_21240 c4e7603a3ab6b5b25047303564f093db 86 Pfam PF10835 Protein of unknown function (DUF2573) 4 80 1.4E-40 T 12-10-2018 IPR020393 Uncharacterised protein family YusU N288_00360 d49edab012e8f54d55932be9847b3991 219 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 49 90 1.6E-15 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 N288_00360 d49edab012e8f54d55932be9847b3991 219 Gene3D G3DSA:2.10.260.10 34 92 1.2E-24 T 12-10-2018 N288_00360 d49edab012e8f54d55932be9847b3991 219 SUPERFAMILY SSF89447 42 93 1.31E-14 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily N288_00360 d49edab012e8f54d55932be9847b3991 219 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 95 218 3.7E-45 T 12-10-2018 IPR039472 Sporulation stage V protein T, GAF domain N288_00360 d49edab012e8f54d55932be9847b3991 219 SMART SM00966 49 93 1.1E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 N288_00360 d49edab012e8f54d55932be9847b3991 219 PIRSF PIRSF026579 42 219 4.2E-92 T 12-10-2018 IPR014213 Sporulation stage V, protein T N288_00360 d49edab012e8f54d55932be9847b3991 219 TIGRFAM TIGR02851 spore_V_T: stage V sporulation protein T 43 218 1.4E-87 T 12-10-2018 IPR014213 Sporulation stage V, protein T N288_00360 d49edab012e8f54d55932be9847b3991 219 Gene3D G3DSA:3.30.450.40 97 219 4.0E-44 T 12-10-2018 IPR029016 GAF-like domain superfamily N288_00360 d49edab012e8f54d55932be9847b3991 219 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 50 92 1.6E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 N288_08660 7bb442c35cc76c71fdd10b3f4fb7b56f 78 SUPERFAMILY SSF52833 2 75 6.92E-18 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_08660 7bb442c35cc76c71fdd10b3f4fb7b56f 78 Gene3D G3DSA:3.40.30.10 1 78 4.1E-23 T 12-10-2018 N288_08660 7bb442c35cc76c71fdd10b3f4fb7b56f 78 Pfam PF00462 Glutaredoxin 4 63 7.5E-13 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 N288_21145 66b3c27b13c906cdc74f2b8137072728 282 Gene3D G3DSA:3.40.190.10 123 231 5.2E-98 T 12-10-2018 N288_21145 66b3c27b13c906cdc74f2b8137072728 282 PIRSF PIRSF002854 1 282 1.1E-99 T 12-10-2018 IPR004872 Lipoprotein NlpA family N288_21145 66b3c27b13c906cdc74f2b8137072728 282 SUPERFAMILY SSF53850 41 280 8.6E-81 T 12-10-2018 N288_21145 66b3c27b13c906cdc74f2b8137072728 282 Pfam PF03180 NLPA lipoprotein 42 280 9.8E-88 T 12-10-2018 IPR004872 Lipoprotein NlpA family N288_21145 66b3c27b13c906cdc74f2b8137072728 282 Gene3D G3DSA:3.40.190.10 44 278 5.2E-98 T 12-10-2018 N288_15260 b908cf47b9815a24bbe3f365daba2f3a 175 Pfam PF06338 ComK protein 7 156 8.2E-45 T 12-10-2018 IPR010461 Competence protein ComK GO:0030420 N288_09250 6ce837ffa46707a753b4d6d67c630132 239 Gene3D G3DSA:1.20.120.1810 29 131 5.1E-26 T 12-10-2018 N288_09250 6ce837ffa46707a753b4d6d67c630132 239 Gene3D G3DSA:1.10.10.10 174 238 1.4E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_09250 6ce837ffa46707a753b4d6d67c630132 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 205 231 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09250 6ce837ffa46707a753b4d6d67c630132 239 TIGRFAM TIGR02835 spore_sigmaE: RNA polymerase sigma-E factor 7 239 5.0E-134 T 12-10-2018 IPR014200 RNA polymerase sigma-E type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_09250 6ce837ffa46707a753b4d6d67c630132 239 Pfam PF04545 Sigma-70, region 4 180 233 4.4E-17 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 N288_09250 6ce837ffa46707a753b4d6d67c630132 239 SUPERFAMILY SSF88659 143 237 3.55E-21 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_09250 6ce837ffa46707a753b4d6d67c630132 239 PIRSF PIRSF000770 6 239 4.6E-77 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09250 6ce837ffa46707a753b4d6d67c630132 239 PRINTS PR00046 Major sigma-70 factor signature 86 99 4.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09250 6ce837ffa46707a753b4d6d67c630132 239 PRINTS PR00046 Major sigma-70 factor signature 184 196 4.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09250 6ce837ffa46707a753b4d6d67c630132 239 PRINTS PR00046 Major sigma-70 factor signature 220 231 4.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09250 6ce837ffa46707a753b4d6d67c630132 239 PRINTS PR00046 Major sigma-70 factor signature 205 220 4.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09250 6ce837ffa46707a753b4d6d67c630132 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 58 234 1.4E-36 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_09250 6ce837ffa46707a753b4d6d67c630132 239 SUPERFAMILY SSF88946 26 131 1.57E-35 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_09250 6ce837ffa46707a753b4d6d67c630132 239 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 86 99 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_09250 6ce837ffa46707a753b4d6d67c630132 239 Pfam PF04542 Sigma-70 region 2 62 131 1.8E-18 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_19325 544147b9ac5ecf77768b6d465106aabb 717 Pfam PF00570 HRDC domain 521 587 2.5E-21 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 N288_19325 544147b9ac5ecf77768b6d465106aabb 717 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 133 142 - T 12-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site N288_19325 544147b9ac5ecf77768b6d465106aabb 717 SMART SM00490 243 324 5.4E-29 T 12-10-2018 IPR001650 Helicase, C-terminal N288_19325 544147b9ac5ecf77768b6d465106aabb 717 Pfam PF09382 RQC domain 402 510 1.2E-33 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 N288_19325 544147b9ac5ecf77768b6d465106aabb 717 SUPERFAMILY SSF52540 58 346 9.76E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_19325 544147b9ac5ecf77768b6d465106aabb 717 Gene3D G3DSA:3.40.50.300 1 201 1.3E-70 T 12-10-2018 N288_19325 544147b9ac5ecf77768b6d465106aabb 717 SUPERFAMILY SSF46785 397 542 3.54E-34 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_19325 544147b9ac5ecf77768b6d465106aabb 717 Gene3D G3DSA:1.10.10.10 335 515 4.0E-45 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_19325 544147b9ac5ecf77768b6d465106aabb 717 Gene3D G3DSA:3.40.50.300 202 333 1.5E-41 T 12-10-2018 N288_19325 544147b9ac5ecf77768b6d465106aabb 717 SMART SM00341 517 597 3.4E-14 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 N288_19325 544147b9ac5ecf77768b6d465106aabb 717 Pfam PF16124 RecQ zinc-binding 336 398 1.8E-14 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain N288_19325 544147b9ac5ecf77768b6d465106aabb 717 Pfam PF00270 DEAD/DEAH box helicase 21 182 6.3E-20 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 N288_19325 544147b9ac5ecf77768b6d465106aabb 717 SUPERFAMILY SSF47819 518 596 5.61E-26 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 N288_19325 544147b9ac5ecf77768b6d465106aabb 717 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 456 1.9E-139 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 N288_19325 544147b9ac5ecf77768b6d465106aabb 717 Pfam PF14493 Helix-turn-helix domain 620 708 3.6E-24 T 12-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 N288_19325 544147b9ac5ecf77768b6d465106aabb 717 Pfam PF00271 Helicase conserved C-terminal domain 218 323 1.0E-19 T 12-10-2018 IPR001650 Helicase, C-terminal N288_19325 544147b9ac5ecf77768b6d465106aabb 717 SMART SM00487 14 211 3.1E-28 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_19325 544147b9ac5ecf77768b6d465106aabb 717 Gene3D G3DSA:1.10.150.80 516 599 8.2E-23 T 12-10-2018 N288_19325 544147b9ac5ecf77768b6d465106aabb 717 SMART SM00956 406 509 3.6E-41 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 N288_19325 544147b9ac5ecf77768b6d465106aabb 717 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 588 4.7E-232 T 12-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 N288_02235 2ddbe8042ef547b428eca20a5e94253d 504 SUPERFAMILY SSF103473 7 493 5.75E-76 T 12-10-2018 IPR036259 MFS transporter superfamily N288_02235 2ddbe8042ef547b428eca20a5e94253d 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 72 94 6.8E-5 T 12-10-2018 N288_02235 2ddbe8042ef547b428eca20a5e94253d 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 354 374 6.8E-5 T 12-10-2018 N288_02235 2ddbe8042ef547b428eca20a5e94253d 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 6.8E-5 T 12-10-2018 N288_02235 2ddbe8042ef547b428eca20a5e94253d 504 Pfam PF07690 Major Facilitator Superfamily 14 405 1.3E-53 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_02235 2ddbe8042ef547b428eca20a5e94253d 504 Gene3D G3DSA:1.20.1720.10 10 213 2.7E-55 T 12-10-2018 N288_02235 2ddbe8042ef547b428eca20a5e94253d 504 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 11 416 2.6E-80 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 N288_02235 2ddbe8042ef547b428eca20a5e94253d 504 Gene3D G3DSA:1.20.1250.20 262 497 2.5E-19 T 12-10-2018 N288_22615 ed7c9a9742b65a3da35d0a9381212d4d 357 Pfam PF00326 Prolyl oligopeptidase family 205 308 1.4E-5 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 N288_22615 ed7c9a9742b65a3da35d0a9381212d4d 357 SUPERFAMILY SSF53474 109 355 9.07E-24 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_22615 ed7c9a9742b65a3da35d0a9381212d4d 357 Gene3D G3DSA:3.40.50.1820 10 355 3.3E-69 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_21770 93a2ff6ba27f90014214e40fe3997c61 118 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 2 107 8.0E-27 T 12-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV N288_17095 c649d50a8c3bb572abe7020f12e779c2 436 SUPERFAMILY SSF52540 5 166 5.61E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_17095 c649d50a8c3bb572abe7020f12e779c2 436 SUPERFAMILY SSF52540 138 435 4.83E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_17095 c649d50a8c3bb572abe7020f12e779c2 436 Gene3D G3DSA:3.30.300.20 353 436 8.2E-36 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta N288_17095 c649d50a8c3bb572abe7020f12e779c2 436 Pfam PF01926 50S ribosome-binding GTPase 179 295 9.7E-27 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_17095 c649d50a8c3bb572abe7020f12e779c2 436 Pfam PF01926 50S ribosome-binding GTPase 6 120 1.1E-24 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_17095 c649d50a8c3bb572abe7020f12e779c2 436 Hamap MF_00195 GTPase Der [der]. 3 436 41.352 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 N288_17095 c649d50a8c3bb572abe7020f12e779c2 436 Gene3D G3DSA:3.40.50.300 171 352 6.4E-57 T 12-10-2018 N288_17095 c649d50a8c3bb572abe7020f12e779c2 436 PIRSF PIRSF006485 2 436 8.7E-176 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 N288_17095 c649d50a8c3bb572abe7020f12e779c2 436 Gene3D G3DSA:3.40.50.300 1 163 3.9E-46 T 12-10-2018 N288_17095 c649d50a8c3bb572abe7020f12e779c2 436 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 432 8.1E-180 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 N288_17095 c649d50a8c3bb572abe7020f12e779c2 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 178 198 4.5E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_17095 c649d50a8c3bb572abe7020f12e779c2 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 248 266 4.5E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_17095 c649d50a8c3bb572abe7020f12e779c2 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 176 340 4.9E-27 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 N288_17095 c649d50a8c3bb572abe7020f12e779c2 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 150 6.5E-24 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 N288_17095 c649d50a8c3bb572abe7020f12e779c2 436 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 433 1.5E-34 T 12-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like N288_07695 8d13f80df78c37ee62f0b0c09019db76 135 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 52 76 - T 12-10-2018 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 N288_07695 8d13f80df78c37ee62f0b0c09019db76 135 SUPERFAMILY SSF46458 10 123 3.6E-35 T 12-10-2018 IPR009050 Globin-like superfamily N288_07695 8d13f80df78c37ee62f0b0c09019db76 135 Pfam PF01152 Bacterial-like globin 9 122 3.5E-29 T 12-10-2018 IPR001486 Truncated hemoglobin GO:0019825 N288_07695 8d13f80df78c37ee62f0b0c09019db76 135 Gene3D G3DSA:1.10.490.10 1 131 4.9E-50 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 N288_17890 97a5455df8bcd28e6addf7b423cac178 171 Pfam PF09548 Stage III sporulation protein AB (spore_III_AB) 3 171 3.5E-55 T 12-10-2018 IPR014198 Stage III sporulation protein AB N288_17890 97a5455df8bcd28e6addf7b423cac178 171 PIRSF PIRSF021435 1 171 3.6E-67 T 12-10-2018 IPR014198 Stage III sporulation protein AB N288_17890 97a5455df8bcd28e6addf7b423cac178 171 TIGRFAM TIGR02833 spore_III_AB: stage III sporulation protein AB 3 171 1.2E-65 T 12-10-2018 IPR014198 Stage III sporulation protein AB N288_08535 bda82e32eab4adeb26f45c832d34b580 88 Gene3D G3DSA:3.30.1340.10 1 88 3.7E-36 T 12-10-2018 IPR035895 HPr-like superfamily N288_08535 bda82e32eab4adeb26f45c832d34b580 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 3.5E-24 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like N288_08535 bda82e32eab4adeb26f45c832d34b580 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 3.5E-24 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like N288_08535 bda82e32eab4adeb26f45c832d34b580 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.5E-24 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like N288_08535 bda82e32eab4adeb26f45c832d34b580 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 7.7E-33 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like N288_08535 bda82e32eab4adeb26f45c832d34b580 88 SUPERFAMILY SSF55594 1 83 2.09E-28 T 12-10-2018 IPR035895 HPr-like superfamily N288_08535 bda82e32eab4adeb26f45c832d34b580 88 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site N288_08535 bda82e32eab4adeb26f45c832d34b580 88 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.9E-31 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like N288_08535 bda82e32eab4adeb26f45c832d34b580 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site N288_09870 22784d4802b7e7330ae1c5c3885f2ac5 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 28.605 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 N288_09870 22784d4802b7e7330ae1c5c3885f2ac5 185 Gene3D G3DSA:3.30.1360.40 31 105 2.9E-71 T 12-10-2018 N288_09870 22784d4802b7e7330ae1c5c3885f2ac5 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.8E-76 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 N288_09870 22784d4802b7e7330ae1c5c3885f2ac5 185 Pfam PF01765 Ribosome recycling factor 21 183 4.9E-66 T 12-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 N288_09870 22784d4802b7e7330ae1c5c3885f2ac5 185 Gene3D G3DSA:1.10.132.20 12 182 2.9E-71 T 12-10-2018 N288_09870 22784d4802b7e7330ae1c5c3885f2ac5 185 SUPERFAMILY SSF55194 5 184 5.63E-73 T 12-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 N288_00675 eb47ff1193f51f7e880f59fe98470605 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 30.178 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 N288_00675 eb47ff1193f51f7e880f59fe98470605 177 Gene3D G3DSA:2.30.30.30 119 177 9.2E-27 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 N288_00675 eb47ff1193f51f7e880f59fe98470605 177 SMART SM00738 2 113 1.8E-53 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 N288_00675 eb47ff1193f51f7e880f59fe98470605 177 Gene3D G3DSA:3.30.70.940 1 118 5.5E-46 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 N288_00675 eb47ff1193f51f7e880f59fe98470605 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 177 1.4E-69 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 N288_00675 eb47ff1193f51f7e880f59fe98470605 177 SUPERFAMILY SSF82679 2 114 1.57E-41 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 N288_00675 eb47ff1193f51f7e880f59fe98470605 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 1.3E-21 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 N288_00675 eb47ff1193f51f7e880f59fe98470605 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 1.3E-21 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 N288_00675 eb47ff1193f51f7e880f59fe98470605 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 1.3E-21 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 N288_00675 eb47ff1193f51f7e880f59fe98470605 177 Pfam PF00467 KOW motif 127 154 1.2E-6 T 12-10-2018 IPR005824 KOW N288_00675 eb47ff1193f51f7e880f59fe98470605 177 Pfam PF02357 Transcription termination factor nusG 3 109 5.0E-29 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 N288_00675 eb47ff1193f51f7e880f59fe98470605 177 SUPERFAMILY SSF50104 121 177 1.55E-20 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily N288_00675 eb47ff1193f51f7e880f59fe98470605 177 SMART SM00739 123 150 8.2E-7 T 12-10-2018 IPR005824 KOW N288_00675 eb47ff1193f51f7e880f59fe98470605 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 12-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site N288_21755 53105724ed9ab5177d62bc8be1c376dc 241 SUPERFAMILY SSF64288 61 239 9.26E-59 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily N288_21755 53105724ed9ab5177d62bc8be1c376dc 241 SUPERFAMILY SSF46785 1 84 1.28E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_21755 53105724ed9ab5177d62bc8be1c376dc 241 Gene3D G3DSA:1.10.10.10 8 75 2.6E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_21755 53105724ed9ab5177d62bc8be1c376dc 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 9.7E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_21755 53105724ed9ab5177d62bc8be1c376dc 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 9.7E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_21755 53105724ed9ab5177d62bc8be1c376dc 241 Pfam PF07702 UTRA domain 95 233 4.4E-48 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 N288_21755 53105724ed9ab5177d62bc8be1c376dc 241 SMART SM00866 94 233 1.2E-48 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 N288_21755 53105724ed9ab5177d62bc8be1c376dc 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 1.8E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_21755 53105724ed9ab5177d62bc8be1c376dc 241 SMART SM00345 14 73 2.0E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_21755 53105724ed9ab5177d62bc8be1c376dc 241 Gene3D G3DSA:3.40.1410.10 76 241 1.2E-59 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 SUPERFAMILY SSF55681 5 245 3.23E-89 T 12-10-2018 N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 Pfam PF01411 tRNA synthetases class II (A) 8 556 1.8E-212 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 SUPERFAMILY SSF50447 455 554 2.05E-17 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 Gene3D G3DSA:2.40.30.130 454 554 5.3E-10 T 12-10-2018 N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 Gene3D G3DSA:3.30.980.10 564 699 1.9E-51 T 12-10-2018 N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 Gene3D G3DSA:3.30.54.20 626 679 1.9E-51 T 12-10-2018 N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 Pfam PF02272 DHHA1 domain 735 874 2.4E-30 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 877 185.212 T 12-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 SUPERFAMILY SSF101353 246 438 3.27E-71 T 12-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 Gene3D G3DSA:3.10.310.40 766 876 7.1E-37 T 12-10-2018 N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 655 698 2.9E-18 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 Gene3D G3DSA:3.30.930.10 4 242 4.9E-95 T 12-10-2018 N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 SUPERFAMILY SSF55186 554 719 2.75E-53 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 SMART SM00863 655 698 5.9E-21 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 300 313 9.3E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 276 292 9.3E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 9.3E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 9.3E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 9.3E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 N288_18735 f58f4c013c77a8fed9d8599926ebd1c7 877 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 857 0.0 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 N288_07125 4f6dab7d36333ff3969be4972ed00503 1077 Gene3D G3DSA:3.40.50.300 4 180 1.7E-5 T 12-10-2018 N288_07125 4f6dab7d36333ff3969be4972ed00503 1077 SUPERFAMILY SSF46894 822 901 1.76E-5 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_07125 4f6dab7d36333ff3969be4972ed00503 1077 SMART SM00028 1018 1051 30.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_07125 4f6dab7d36333ff3969be4972ed00503 1077 SMART SM00028 609 644 31.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_07125 4f6dab7d36333ff3969be4972ed00503 1077 SMART SM00028 453 486 31.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_07125 4f6dab7d36333ff3969be4972ed00503 1077 SMART SM00028 984 1017 20.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_07125 4f6dab7d36333ff3969be4972ed00503 1077 Pfam PF03704 Bacterial transcriptional activator domain 939 1067 8.2E-19 T 12-10-2018 IPR005158 Bacterial transcriptional activator domain N288_07125 4f6dab7d36333ff3969be4972ed00503 1077 SMART SM01043 926 1068 2.1E-28 T 12-10-2018 IPR005158 Bacterial transcriptional activator domain N288_07125 4f6dab7d36333ff3969be4972ed00503 1077 SUPERFAMILY SSF48452 575 759 3.72E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_07125 4f6dab7d36333ff3969be4972ed00503 1077 SUPERFAMILY SSF48452 939 1069 7.44E-25 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_07125 4f6dab7d36333ff3969be4972ed00503 1077 SUPERFAMILY SSF52540 42 239 8.35E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_07125 4f6dab7d36333ff3969be4972ed00503 1077 Gene3D G3DSA:1.25.40.10 608 762 1.7E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_07125 4f6dab7d36333ff3969be4972ed00503 1077 Gene3D G3DSA:1.25.40.10 404 591 2.4E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_07125 4f6dab7d36333ff3969be4972ed00503 1077 Gene3D G3DSA:1.10.10.10 818 919 2.5E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_07125 4f6dab7d36333ff3969be4972ed00503 1077 SUPERFAMILY SSF48452 415 597 5.44E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_07125 4f6dab7d36333ff3969be4972ed00503 1077 Gene3D G3DSA:1.25.40.10 925 1075 7.1E-26 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_25550 0cdc883830d1aaf90c4d405197aaab65 322 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 83 226 1.2E-44 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain N288_25550 0cdc883830d1aaf90c4d405197aaab65 322 Gene3D G3DSA:1.10.260.150 60 321 5.0E-78 T 12-10-2018 N288_25550 0cdc883830d1aaf90c4d405197aaab65 322 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 83 226 1.1E-32 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain N288_25635 de004df23ce8cc8f4a3ab18578f89844 160 SUPERFAMILY SSF55729 3 127 8.41E-11 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_25635 de004df23ce8cc8f4a3ab18578f89844 160 Pfam PF00583 Acetyltransferase (GNAT) family 32 128 8.5E-7 T 12-10-2018 IPR000182 GNAT domain N288_25635 de004df23ce8cc8f4a3ab18578f89844 160 Gene3D G3DSA:3.40.630.30 2 127 1.3E-9 T 12-10-2018 N288_07490 797d0126d6b67b83346e8445db7d429c 385 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 5 374 9.1E-137 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 N288_07490 797d0126d6b67b83346e8445db7d429c 385 SUPERFAMILY SSF53383 4 378 4.22E-119 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_07490 797d0126d6b67b83346e8445db7d429c 385 Gene3D G3DSA:3.40.640.10 47 286 1.1E-130 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_07490 797d0126d6b67b83346e8445db7d429c 385 Gene3D G3DSA:3.90.1150.10 15 367 1.1E-130 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_07490 797d0126d6b67b83346e8445db7d429c 385 Pfam PF00202 Aminotransferase class-III 15 377 8.4E-111 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_07490 797d0126d6b67b83346e8445db7d429c 385 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 204 241 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_07490 797d0126d6b67b83346e8445db7d429c 385 PIRSF PIRSF000521 106 147 0.0019 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_07490 797d0126d6b67b83346e8445db7d429c 385 PIRSF PIRSF000521 11 110 0.011 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_07490 797d0126d6b67b83346e8445db7d429c 385 PIRSF PIRSF000521 153 380 4.0E-29 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_07490 797d0126d6b67b83346e8445db7d429c 385 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 3 380 64.357 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 N288_10890 626404a3dd09cffdcf4dfb692ccbec5d 381 Pfam PF00149 Calcineurin-like phosphoesterase 1 176 1.7E-15 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 N288_10890 626404a3dd09cffdcf4dfb692ccbec5d 381 Gene3D G3DSA:3.60.21.10 1 261 4.9E-77 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_10890 626404a3dd09cffdcf4dfb692ccbec5d 381 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 240 1.1E-48 T 12-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 N288_10890 626404a3dd09cffdcf4dfb692ccbec5d 381 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 262 355 3.0E-15 T 12-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain N288_10890 626404a3dd09cffdcf4dfb692ccbec5d 381 SUPERFAMILY SSF56300 1 317 7.45E-54 T 12-10-2018 N288_23415 3ddd92b850d529be5fbf88359b9d9c81 1415 Pfam PF00395 S-layer homology domain 99 140 1.0E-12 T 12-10-2018 IPR001119 S-layer homology domain N288_23415 3ddd92b850d529be5fbf88359b9d9c81 1415 Pfam PF00395 S-layer homology domain 38 80 1.5E-12 T 12-10-2018 IPR001119 S-layer homology domain N288_23415 3ddd92b850d529be5fbf88359b9d9c81 1415 Pfam PF00395 S-layer homology domain 158 201 1.7E-9 T 12-10-2018 IPR001119 S-layer homology domain N288_23415 3ddd92b850d529be5fbf88359b9d9c81 1415 Gene3D G3DSA:2.60.40.10 1062 1155 7.1E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_23415 3ddd92b850d529be5fbf88359b9d9c81 1415 Gene3D G3DSA:2.60.40.10 699 788 2.0E-9 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_23415 3ddd92b850d529be5fbf88359b9d9c81 1415 Gene3D G3DSA:2.60.40.10 607 698 1.1E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_23415 3ddd92b850d529be5fbf88359b9d9c81 1415 Gene3D G3DSA:2.60.40.10 880 968 2.2E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_23415 3ddd92b850d529be5fbf88359b9d9c81 1415 Gene3D G3DSA:2.60.40.10 789 879 1.2E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_23415 3ddd92b850d529be5fbf88359b9d9c81 1415 Gene3D G3DSA:2.60.40.1080 998 1061 5.0E-6 T 12-10-2018 N288_23415 3ddd92b850d529be5fbf88359b9d9c81 1415 Pfam PF02368 Bacterial Ig-like domain (group 2) 625 687 6.0E-5 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 N288_23415 3ddd92b850d529be5fbf88359b9d9c81 1415 SMART SM00736 881 973 0.022 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 N288_23415 3ddd92b850d529be5fbf88359b9d9c81 1415 SMART SM00736 1066 1160 0.033 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 N288_23415 3ddd92b850d529be5fbf88359b9d9c81 1415 SMART SM00635 609 690 0.32 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 N288_23415 3ddd92b850d529be5fbf88359b9d9c81 1415 SMART SM00635 790 871 8.9 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 N288_23415 3ddd92b850d529be5fbf88359b9d9c81 1415 SMART SM00635 525 601 9.5 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 N288_21680 aebe05d0d68817320bd42c960d4dfb52 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 4 209 38.097 T 12-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 N288_21680 aebe05d0d68817320bd42c960d4dfb52 211 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 2 105 29.517 T 12-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 N288_21680 aebe05d0d68817320bd42c960d4dfb52 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 122 207 4.6E-18 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 N288_21680 aebe05d0d68817320bd42c960d4dfb52 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 121 204 3.5E-32 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 N288_21680 aebe05d0d68817320bd42c960d4dfb52 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 29 101 6.0E-33 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 N288_21680 aebe05d0d68817320bd42c960d4dfb52 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 118 204 21.021 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 N288_21680 aebe05d0d68817320bd42c960d4dfb52 211 SUPERFAMILY SSF101386 120 208 9.35E-27 T 12-10-2018 N288_21680 aebe05d0d68817320bd42c960d4dfb52 211 Gene3D G3DSA:1.10.287.1080 117 210 2.0E-33 T 12-10-2018 N288_21680 aebe05d0d68817320bd42c960d4dfb52 211 SUPERFAMILY SSF141734 3 108 6.41E-46 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 N288_21680 aebe05d0d68817320bd42c960d4dfb52 211 Gene3D G3DSA:3.10.20.400 1 92 6.8E-39 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 N288_21680 aebe05d0d68817320bd42c960d4dfb52 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 51 100 2.0E-21 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 N288_18665 6f3f2efaab39aa72c8d9906d127c9091 234 SUPERFAMILY SSF53167 1 228 1.02E-70 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 N288_18665 6f3f2efaab39aa72c8d9906d127c9091 234 Pfam PF01048 Phosphorylase superfamily 2 227 4.1E-53 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 N288_18665 6f3f2efaab39aa72c8d9906d127c9091 234 Gene3D G3DSA:3.40.50.1580 1 234 7.7E-70 T 12-10-2018 N288_18665 6f3f2efaab39aa72c8d9906d127c9091 234 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.177 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 N288_18665 6f3f2efaab39aa72c8d9906d127c9091 234 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 5.3E-111 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 N288_13510 f92b39908b1ad938aa6e43ea8df4a5a6 131 Gene3D G3DSA:3.10.180.10 2 113 7.8E-16 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_13510 f92b39908b1ad938aa6e43ea8df4a5a6 131 SUPERFAMILY SSF54593 8 116 1.38E-7 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_08985 a05f84bc227c772dd4913930bd9300e9 391 Pfam PF13527 Acetyltransferase (GNAT) domain 2 126 7.1E-38 T 12-10-2018 N288_08985 a05f84bc227c772dd4913930bd9300e9 391 Gene3D G3DSA:3.40.630.30 8 280 3.7E-132 T 12-10-2018 N288_08985 a05f84bc227c772dd4913930bd9300e9 391 Gene3D G3DSA:3.30.1050.10 281 381 3.7E-132 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily N288_08985 a05f84bc227c772dd4913930bd9300e9 391 SUPERFAMILY SSF55718 280 391 1.1E-21 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily N288_08985 a05f84bc227c772dd4913930bd9300e9 391 Pfam PF13530 Sterol carrier protein domain 174 387 4.6E-53 T 12-10-2018 IPR025559 Enhanced intracellular survival protein domain N288_08985 a05f84bc227c772dd4913930bd9300e9 391 Gene3D G3DSA:3.40.630.30 127 391 3.7E-132 T 12-10-2018 N288_08985 a05f84bc227c772dd4913930bd9300e9 391 SUPERFAMILY SSF55729 2 279 1.09E-72 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_18785 ef5d9283f5ec1a4e889c5e9824466d7d 139 Pfam PF02082 Transcriptional regulator 1 82 2.8E-27 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type N288_18785 ef5d9283f5ec1a4e889c5e9824466d7d 139 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 124 2.4E-35 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type N288_18785 ef5d9283f5ec1a4e889c5e9824466d7d 139 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site N288_18785 ef5d9283f5ec1a4e889c5e9824466d7d 139 SUPERFAMILY SSF46785 2 127 1.41E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_18785 ef5d9283f5ec1a4e889c5e9824466d7d 139 Gene3D G3DSA:1.10.10.10 1 139 3.6E-52 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_02035 09b8c9d7cb8a23b68faf47c0f80a85af 349 SUPERFAMILY SSF51905 1 319 3.02E-33 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_02035 09b8c9d7cb8a23b68faf47c0f80a85af 349 Gene3D G3DSA:3.50.50.60 127 248 1.1E-79 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_02035 09b8c9d7cb8a23b68faf47c0f80a85af 349 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 307 1.1E-23 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 N288_02035 09b8c9d7cb8a23b68faf47c0f80a85af 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 1.0E-23 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_02035 09b8c9d7cb8a23b68faf47c0f80a85af 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 151 175 1.0E-23 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_02035 09b8c9d7cb8a23b68faf47c0f80a85af 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 1.0E-23 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_02035 09b8c9d7cb8a23b68faf47c0f80a85af 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 64 74 1.0E-23 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_02035 09b8c9d7cb8a23b68faf47c0f80a85af 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.0E-23 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_02035 09b8c9d7cb8a23b68faf47c0f80a85af 349 Hamap MF_01685 Ferredoxin--NADP reductase. 6 333 36.832 T 12-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 N288_02035 09b8c9d7cb8a23b68faf47c0f80a85af 349 Gene3D G3DSA:3.50.50.60 6 309 1.1E-79 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_02035 09b8c9d7cb8a23b68faf47c0f80a85af 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.7E-16 T 12-10-2018 N288_02035 09b8c9d7cb8a23b68faf47c0f80a85af 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 1.7E-16 T 12-10-2018 N288_02035 09b8c9d7cb8a23b68faf47c0f80a85af 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 1.7E-16 T 12-10-2018 N288_02035 09b8c9d7cb8a23b68faf47c0f80a85af 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.7E-16 T 12-10-2018 N288_02035 09b8c9d7cb8a23b68faf47c0f80a85af 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 1.7E-16 T 12-10-2018 N288_22705 639043faf1fa524c1ecaa389848e93ca 498 Pfam PF04030 D-arabinono-1,4-lactone oxidase 226 483 3.6E-8 T 12-10-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 N288_22705 639043faf1fa524c1ecaa389848e93ca 498 Pfam PF01565 FAD binding domain 56 190 3.0E-31 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 N288_22705 639043faf1fa524c1ecaa389848e93ca 498 SUPERFAMILY SSF55103 198 479 2.01E-17 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 N288_22705 639043faf1fa524c1ecaa389848e93ca 498 SUPERFAMILY SSF56176 42 219 8.88E-40 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 N288_22705 639043faf1fa524c1ecaa389848e93ca 498 Gene3D G3DSA:3.30.465.40 36 238 9.5E-31 T 12-10-2018 N288_21565 3c5dde914f855f06111d1dd01796dafc 780 SUPERFAMILY SSF50249 57 137 2.22E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_21565 3c5dde914f855f06111d1dd01796dafc 780 Pfam PF00575 S1 RNA binding domain 627 709 2.6E-17 T 12-10-2018 IPR003029 S1 domain GO:0003676 N288_21565 3c5dde914f855f06111d1dd01796dafc 780 SMART SM00955 250 580 1.6E-184 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 N288_21565 3c5dde914f855f06111d1dd01796dafc 780 SMART SM00316 628 710 2.2E-22 T 12-10-2018 IPR022967 RNA-binding domain, S1 N288_21565 3c5dde914f855f06111d1dd01796dafc 780 SUPERFAMILY SSF50249 128 227 2.24E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_21565 3c5dde914f855f06111d1dd01796dafc 780 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 60 710 5.6E-254 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 N288_21565 3c5dde914f855f06111d1dd01796dafc 780 TIGRFAM TIGR02063 RNase_R: ribonuclease R 10 710 2.5E-289 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 N288_21565 3c5dde914f855f06111d1dd01796dafc 780 SMART SM00357 140 204 2.7E-6 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 N288_21565 3c5dde914f855f06111d1dd01796dafc 780 SMART SM00357 75 135 7.7E-15 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 N288_21565 3c5dde914f855f06111d1dd01796dafc 780 Gene3D G3DSA:2.40.50.140 631 738 1.6E-26 T 12-10-2018 N288_21565 3c5dde914f855f06111d1dd01796dafc 780 Hamap MF_01895 Ribonuclease R [rnr]. 27 710 61.179 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 N288_21565 3c5dde914f855f06111d1dd01796dafc 780 SUPERFAMILY SSF50249 628 708 3.79E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_21565 3c5dde914f855f06111d1dd01796dafc 780 ProSitePatterns PS01175 Ribonuclease II family signature. 547 571 - T 12-10-2018 IPR022966 Ribonuclease II/R, conserved site N288_21565 3c5dde914f855f06111d1dd01796dafc 780 Gene3D G3DSA:2.40.50.140 139 205 8.5E-10 T 12-10-2018 N288_21565 3c5dde914f855f06111d1dd01796dafc 780 Gene3D G3DSA:2.40.50.140 61 137 2.2E-19 T 12-10-2018 N288_21565 3c5dde914f855f06111d1dd01796dafc 780 Pfam PF08206 Ribonuclease B OB domain 149 203 6.6E-10 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain N288_21565 3c5dde914f855f06111d1dd01796dafc 780 Pfam PF08206 Ribonuclease B OB domain 76 134 1.9E-23 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain N288_21565 3c5dde914f855f06111d1dd01796dafc 780 SUPERFAMILY SSF50249 210 627 8.57E-151 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_21565 3c5dde914f855f06111d1dd01796dafc 780 Pfam PF00773 RNB domain 250 578 4.1E-116 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 N288_16565 c04a78e733c10ea041538541e8047d4e 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.8E-30 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_16565 c04a78e733c10ea041538541e8047d4e 66 SMART SM00357 3 66 1.8E-30 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 N288_16565 c04a78e733c10ea041538541e8047d4e 66 PIRSF PIRSF002599 1 66 1.9E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 N288_16565 c04a78e733c10ea041538541e8047d4e 66 Gene3D G3DSA:2.40.50.140 1 66 1.2E-30 T 12-10-2018 N288_16565 c04a78e733c10ea041538541e8047d4e 66 SUPERFAMILY SSF50249 1 65 3.86E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_16565 c04a78e733c10ea041538541e8047d4e 66 PRINTS PR00050 Cold shock protein signature 39 57 5.0E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_16565 c04a78e733c10ea041538541e8047d4e 66 PRINTS PR00050 Cold shock protein signature 24 33 5.0E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_16565 c04a78e733c10ea041538541e8047d4e 66 PRINTS PR00050 Cold shock protein signature 4 19 5.0E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_16565 c04a78e733c10ea041538541e8047d4e 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 12-10-2018 IPR019844 Cold-shock conserved site N288_17605 d6bc94c88580fad58650d9f15600ee40 338 Gene3D G3DSA:3.20.20.70 2 338 7.7E-126 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_17605 d6bc94c88580fad58650d9f15600ee40 338 Hamap MF_01614 NADPH dehydrogenase [namA]. 2 338 67.578 T 12-10-2018 IPR023663 NADPH dehydrogenase GO:0003959|GO:0055114 N288_17605 d6bc94c88580fad58650d9f15600ee40 338 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 325 2.4E-88 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 N288_17605 d6bc94c88580fad58650d9f15600ee40 338 SUPERFAMILY SSF51395 3 334 6.81E-113 T 12-10-2018 N288_17755 8ac480806f5dcb9f445ebcdace887376 692 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 582 591 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site N288_17755 8ac480806f5dcb9f445ebcdace887376 692 Gene3D G3DSA:1.10.8.60 541 623 6.5E-24 T 12-10-2018 N288_17755 8ac480806f5dcb9f445ebcdace887376 692 Gene3D G3DSA:3.40.50.300 355 540 2.5E-65 T 12-10-2018 N288_17755 8ac480806f5dcb9f445ebcdace887376 692 Gene3D G3DSA:3.30.450.20 223 339 1.1E-17 T 12-10-2018 N288_17755 8ac480806f5dcb9f445ebcdace887376 692 Pfam PF00989 PAS fold 237 339 1.2E-14 T 12-10-2018 IPR013767 PAS fold GO:0006355 N288_17755 8ac480806f5dcb9f445ebcdace887376 692 Pfam PF00989 PAS fold 121 218 3.0E-11 T 12-10-2018 IPR013767 PAS fold GO:0006355 N288_17755 8ac480806f5dcb9f445ebcdace887376 692 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 650 667 2.9E-11 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 N288_17755 8ac480806f5dcb9f445ebcdace887376 692 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 667 687 2.9E-11 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 N288_17755 8ac480806f5dcb9f445ebcdace887376 692 Gene3D G3DSA:1.10.10.60 635 688 1.1E-15 T 12-10-2018 N288_17755 8ac480806f5dcb9f445ebcdace887376 692 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 119 227 2.4E-10 T 12-10-2018 IPR000014 PAS domain N288_17755 8ac480806f5dcb9f445ebcdace887376 692 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 234 349 7.6E-17 T 12-10-2018 IPR000014 PAS domain N288_17755 8ac480806f5dcb9f445ebcdace887376 692 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 392 405 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 N288_17755 8ac480806f5dcb9f445ebcdace887376 692 Pfam PF00158 Sigma-54 interaction domain 368 536 9.2E-67 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 N288_17755 8ac480806f5dcb9f445ebcdace887376 692 Gene3D G3DSA:3.30.450.20 124 222 2.2E-16 T 12-10-2018 N288_17755 8ac480806f5dcb9f445ebcdace887376 692 SMART SM00091 117 183 1.2E-11 T 12-10-2018 IPR000014 PAS domain N288_17755 8ac480806f5dcb9f445ebcdace887376 692 SMART SM00091 236 301 2.5E-8 T 12-10-2018 IPR000014 PAS domain N288_17755 8ac480806f5dcb9f445ebcdace887376 692 SUPERFAMILY SSF46689 582 686 4.35E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_17755 8ac480806f5dcb9f445ebcdace887376 692 SUPERFAMILY SSF55785 217 336 4.19E-15 T 12-10-2018 IPR035965 PAS domain superfamily N288_17755 8ac480806f5dcb9f445ebcdace887376 692 Pfam PF02954 Bacterial regulatory protein, Fis family 644 684 5.1E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 N288_17755 8ac480806f5dcb9f445ebcdace887376 692 SMART SM00382 388 532 2.9E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_17755 8ac480806f5dcb9f445ebcdace887376 692 Gene3D G3DSA:3.40.50.720 3 123 1.2E-6 T 12-10-2018 N288_17755 8ac480806f5dcb9f445ebcdace887376 692 SUPERFAMILY SSF52540 367 614 5.68E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_17755 8ac480806f5dcb9f445ebcdace887376 692 SUPERFAMILY SSF51735 3 98 2.39E-10 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_17755 8ac480806f5dcb9f445ebcdace887376 692 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 455 470 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 N288_17755 8ac480806f5dcb9f445ebcdace887376 692 SUPERFAMILY SSF55785 120 214 8.38E-17 T 12-10-2018 IPR035965 PAS domain superfamily N288_07170 7776834d4fdb4063c13aa236be21f120 327 Gene3D G3DSA:3.40.47.10 1 326 1.5E-64 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_07170 7776834d4fdb4063c13aa236be21f120 327 SUPERFAMILY SSF53901 26 323 1.64E-28 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_07170 7776834d4fdb4063c13aa236be21f120 327 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 322 1.4E-16 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 N288_07170 7776834d4fdb4063c13aa236be21f120 327 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 96 177 4.7E-12 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 N288_05210 f20c58bfccb0c2f8fcef8b6063bf2113 169 SUPERFAMILY SSF55729 1 157 2.1E-30 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_05210 f20c58bfccb0c2f8fcef8b6063bf2113 169 Pfam PF00583 Acetyltransferase (GNAT) family 34 145 1.4E-18 T 12-10-2018 IPR000182 GNAT domain N288_05210 f20c58bfccb0c2f8fcef8b6063bf2113 169 Gene3D G3DSA:3.40.630.30 10 164 2.1E-26 T 12-10-2018 N288_22045 2753ad06b08d5aa8cacf92a2b2b0567e 287 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 1.5E-21 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 N288_22045 2753ad06b08d5aa8cacf92a2b2b0567e 287 Pfam PF00700 Bacterial flagellin C-terminal helical region 204 286 2.0E-9 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 N288_22045 2753ad06b08d5aa8cacf92a2b2b0567e 287 Gene3D G3DSA:1.20.1330.10 40 233 3.0E-48 T 12-10-2018 N288_22045 2753ad06b08d5aa8cacf92a2b2b0567e 287 SUPERFAMILY SSF64518 1 287 5.49E-68 T 12-10-2018 N288_22045 2753ad06b08d5aa8cacf92a2b2b0567e 287 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 179 6.3E-56 T 12-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 N288_06280 e39f4cee49cb29eaf30a1cb338e45c7f 150 Pfam PF01047 MarR family 31 84 4.6E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_06280 e39f4cee49cb29eaf30a1cb338e45c7f 150 SMART SM00347 20 120 1.8E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_06280 e39f4cee49cb29eaf30a1cb338e45c7f 150 SUPERFAMILY SSF46785 24 134 1.27E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_06280 e39f4cee49cb29eaf30a1cb338e45c7f 150 Gene3D G3DSA:1.10.10.10 3 136 9.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_00010 7b0eccff36fb32af325f67fcdc437d48 378 Pfam PF02767 DNA polymerase III beta subunit, central domain 137 251 4.3E-39 T 12-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 N288_00010 7b0eccff36fb32af325f67fcdc437d48 378 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 127 4.6E-40 T 12-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 N288_00010 7b0eccff36fb32af325f67fcdc437d48 378 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 377 6.5E-127 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 N288_00010 7b0eccff36fb32af325f67fcdc437d48 378 Gene3D G3DSA:3.10.150.10 1 250 7.6E-135 T 12-10-2018 N288_00010 7b0eccff36fb32af325f67fcdc437d48 378 SUPERFAMILY SSF55979 1 127 1.68E-23 T 12-10-2018 N288_00010 7b0eccff36fb32af325f67fcdc437d48 378 SUPERFAMILY SSF55979 254 377 5.07E-31 T 12-10-2018 N288_00010 7b0eccff36fb32af325f67fcdc437d48 378 SUPERFAMILY SSF55979 134 251 5.54E-28 T 12-10-2018 N288_00010 7b0eccff36fb32af325f67fcdc437d48 378 SMART SM00480 17 373 2.4E-170 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 N288_00010 7b0eccff36fb32af325f67fcdc437d48 378 Gene3D G3DSA:3.70.10.10 145 375 7.6E-135 T 12-10-2018 N288_00010 7b0eccff36fb32af325f67fcdc437d48 378 PIRSF PIRSF000804 1 378 4.1E-119 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 N288_00010 7b0eccff36fb32af325f67fcdc437d48 378 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 254 376 1.0E-36 T 12-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 N288_17505 915f9320e4a8b3cc4c07279fe8507f25 306 Gene3D G3DSA:3.20.20.100 1 298 6.7E-105 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily N288_17505 915f9320e4a8b3cc4c07279fe8507f25 306 Pfam PF00248 Aldo/keto reductase family 15 296 2.2E-62 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain N288_17505 915f9320e4a8b3cc4c07279fe8507f25 306 SUPERFAMILY SSF51430 1 297 7.2E-79 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily N288_17505 915f9320e4a8b3cc4c07279fe8507f25 306 PRINTS PR00069 Aldo-keto reductase signature 134 151 1.1E-6 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_17505 915f9320e4a8b3cc4c07279fe8507f25 306 PRINTS PR00069 Aldo-keto reductase signature 37 61 1.1E-6 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_17505 915f9320e4a8b3cc4c07279fe8507f25 306 PRINTS PR00069 Aldo-keto reductase signature 103 121 1.1E-6 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_15060 13cd9eb7052353aad2d724d2a04a7bcf 124 Pfam PF01541 GIY-YIG catalytic domain 49 117 3.3E-8 T 12-10-2018 IPR000305 GIY-YIG endonuclease N288_15060 13cd9eb7052353aad2d724d2a04a7bcf 124 Gene3D G3DSA:3.40.1440.10 34 122 1.7E-12 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 N288_15060 13cd9eb7052353aad2d724d2a04a7bcf 124 SMART SM00465 43 122 3.7E-7 T 12-10-2018 IPR000305 GIY-YIG endonuclease N288_15060 13cd9eb7052353aad2d724d2a04a7bcf 124 SUPERFAMILY SSF82771 43 120 8.24E-11 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 N288_15060 13cd9eb7052353aad2d724d2a04a7bcf 124 PIRSF PIRSF026568 1 124 4.9E-51 T 12-10-2018 IPR014527 Excinuclease GIY-YIG catalytic domain-containing uncharacterised conserved protein N288_08560 156783a93d465b4ace771f6103a7e4c6 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 166 3.1E-50 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 N288_08560 156783a93d465b4ace771f6103a7e4c6 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 289 6.0E-37 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 N288_08560 156783a93d465b4ace771f6103a7e4c6 292 PIRSF PIRSF000103 2 292 7.3E-76 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 N288_08560 156783a93d465b4ace771f6103a7e4c6 292 Gene3D G3DSA:3.40.50.720 3 167 4.9E-53 T 12-10-2018 N288_08560 156783a93d465b4ace771f6103a7e4c6 292 SUPERFAMILY SSF48179 168 292 3.17E-39 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_08560 156783a93d465b4ace771f6103a7e4c6 292 Gene3D G3DSA:1.10.1040.10 168 292 1.8E-39 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 N288_08560 156783a93d465b4ace771f6103a7e4c6 292 SUPERFAMILY SSF51735 8 168 1.73E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_18395 b9812a9ae73af611c6fa92da3228989e 132 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 6 130 2.6E-45 T 12-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 N288_18395 b9812a9ae73af611c6fa92da3228989e 132 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 93 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 N288_18395 b9812a9ae73af611c6fa92da3228989e 132 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 101 2.4E-17 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain N288_18395 b9812a9ae73af611c6fa92da3228989e 132 SUPERFAMILY SSF53927 2 130 1.42E-49 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 N288_18395 b9812a9ae73af611c6fa92da3228989e 132 Gene3D G3DSA:3.40.140.10 1 132 2.2E-58 T 12-10-2018 N288_19870 d12b9d01c18d7d28d52290d8b371f540 200 SUPERFAMILY SSF55174 2 200 3.79E-70 T 12-10-2018 N288_19870 d12b9d01c18d7d28d52290d8b371f540 200 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 200 1.9E-86 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 N288_19870 d12b9d01c18d7d28d52290d8b371f540 200 ProSitePatterns PS00632 Ribosomal protein S4 signature. 90 114 - T 12-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_19870 d12b9d01c18d7d28d52290d8b371f540 200 Gene3D G3DSA:3.10.290.10 91 185 2.4E-77 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 N288_19870 d12b9d01c18d7d28d52290d8b371f540 200 Pfam PF01479 S4 domain 93 139 1.9E-20 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_19870 d12b9d01c18d7d28d52290d8b371f540 200 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 91 1.2E-30 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 N288_19870 d12b9d01c18d7d28d52290d8b371f540 200 SMART SM00363 92 156 4.4E-20 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_19870 d12b9d01c18d7d28d52290d8b371f540 200 SMART SM01390 3 91 1.0E-48 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 N288_19870 d12b9d01c18d7d28d52290d8b371f540 200 Gene3D G3DSA:1.10.1050.10 6 200 2.4E-77 T 12-10-2018 N288_19870 d12b9d01c18d7d28d52290d8b371f540 200 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 200 36.635 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 N288_25530 5527c6c59591eb0b0368207191cd157e 335 SUPERFAMILY SSF53659 5 333 5.35E-110 T 12-10-2018 N288_25530 5527c6c59591eb0b0368207191cd157e 335 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 327 1.5E-109 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 N288_25530 5527c6c59591eb0b0368207191cd157e 335 Gene3D G3DSA:3.40.718.10 1 334 5.7E-140 T 12-10-2018 N288_25530 5527c6c59591eb0b0368207191cd157e 335 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 8 331 7.5E-112 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 N288_06980 0f0f9953ff666e243bccdfe2976c1005 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_06980 0f0f9953ff666e243bccdfe2976c1005 214 Gene3D G3DSA:3.40.50.12740 2 208 3.9E-72 T 12-10-2018 N288_06980 0f0f9953ff666e243bccdfe2976c1005 214 SMART SM00421 145 202 1.5E-26 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_06980 0f0f9953ff666e243bccdfe2976c1005 214 SUPERFAMILY SSF46894 139 209 1.94E-23 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_06980 0f0f9953ff666e243bccdfe2976c1005 214 SUPERFAMILY SSF52172 2 133 1.57E-30 T 12-10-2018 IPR011006 CheY-like superfamily N288_06980 0f0f9953ff666e243bccdfe2976c1005 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 4.3E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_06980 0f0f9953ff666e243bccdfe2976c1005 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 4.3E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_06980 0f0f9953ff666e243bccdfe2976c1005 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 4.3E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_06980 0f0f9953ff666e243bccdfe2976c1005 214 SMART SM00448 2 115 4.1E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_06980 0f0f9953ff666e243bccdfe2976c1005 214 Pfam PF00072 Response regulator receiver domain 4 113 2.2E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_06980 0f0f9953ff666e243bccdfe2976c1005 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 1.8E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_02355 e434a8c6ba9394ec51b5cd08cd05b033 492 Gene3D G3DSA:3.40.309.10 254 451 3.8E-146 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 N288_02355 e434a8c6ba9394ec51b5cd08cd05b033 492 SUPERFAMILY SSF53720 6 480 1.03E-134 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 N288_02355 e434a8c6ba9394ec51b5cd08cd05b033 492 Gene3D G3DSA:3.40.605.10 19 474 3.8E-146 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 N288_02355 e434a8c6ba9394ec51b5cd08cd05b033 492 Pfam PF00171 Aldehyde dehydrogenase family 20 478 6.9E-141 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 N288_02355 e434a8c6ba9394ec51b5cd08cd05b033 492 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 N288_22635 6ff46435a402a0f706fb9087cea87f80 943 SUPERFAMILY SSF50998 503 811 7.46E-13 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily N288_22635 6ff46435a402a0f706fb9087cea87f80 943 SUPERFAMILY SSF49785 41 186 2.21E-9 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily N288_22635 6ff46435a402a0f706fb9087cea87f80 943 Gene3D G3DSA:2.130.10.10 200 454 3.2E-10 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 N288_22635 6ff46435a402a0f706fb9087cea87f80 943 SUPERFAMILY SSF50998 219 553 3.69E-19 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily N288_22635 6ff46435a402a0f706fb9087cea87f80 943 Pfam PF02018 Carbohydrate binding domain 39 155 1.5E-7 T 12-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 N288_22635 6ff46435a402a0f706fb9087cea87f80 943 Gene3D G3DSA:2.60.120.260 38 188 3.4E-23 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily N288_11540 0d8dfab3430c73e917b3b3755089ba91 363 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 5 358 50.925 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 N288_11540 0d8dfab3430c73e917b3b3755089ba91 363 Gene3D G3DSA:3.90.1150.10 23 352 7.3E-104 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_11540 0d8dfab3430c73e917b3b3755089ba91 363 SUPERFAMILY SSF53383 24 357 1.36E-67 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_11540 0d8dfab3430c73e917b3b3755089ba91 363 Pfam PF00155 Aminotransferase class I and II 37 354 4.7E-47 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 N288_11540 0d8dfab3430c73e917b3b3755089ba91 363 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 222 231 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 N288_11540 0d8dfab3430c73e917b3b3755089ba91 363 Gene3D G3DSA:3.40.640.10 46 270 7.3E-104 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_11540 0d8dfab3430c73e917b3b3755089ba91 363 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 356 1.5E-93 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 Gene3D G3DSA:1.10.150.110 1 84 8.7E-20 T 12-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 SMART SM00481 338 417 4.6E-25 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 SUPERFAMILY SSF158702 68 145 1.49E-7 T 12-10-2018 N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 Gene3D G3DSA:3.30.210.10 261 326 2.9E-18 T 12-10-2018 IPR037160 DNA polymerase, thumb domain superfamily N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 Pfam PF14791 DNA polymerase beta thumb 254 316 1.3E-19 T 12-10-2018 IPR029398 DNA polymerase beta, thumb domain N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 Gene3D G3DSA:3.20.20.140 327 572 1.8E-79 T 12-10-2018 N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 Pfam PF14520 Helix-hairpin-helix domain 92 145 1.8E-7 T 12-10-2018 N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 SMART SM00278 90 109 27.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 SMART SM00278 125 144 130.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 SMART SM00278 50 69 15.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 Pfam PF02811 PHP domain 339 480 1.2E-11 T 12-10-2018 IPR004013 PHP domain GO:0003824 N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 SUPERFAMILY SSF81301 154 316 2.03E-43 T 12-10-2018 N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 SMART SM00483 2 316 1.6E-81 T 12-10-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 Gene3D G3DSA:3.30.460.10 154 260 3.8E-23 T 12-10-2018 N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 PIRSF PIRSF005047 3 572 3.6E-240 T 12-10-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 SUPERFAMILY SSF47802 1 79 3.92E-20 T 12-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 SUPERFAMILY SSF89550 336 570 7.72E-57 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 Pfam PF14716 Helix-hairpin-helix domain 6 71 3.6E-19 T 12-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain N288_19430 1a3972f2e2129e024968ad6b2f5daaeb 572 Gene3D G3DSA:1.10.150.20 85 149 4.5E-20 T 12-10-2018 N288_07655 d091c15526878855c6f07b8ef698975b 131 Pfam PF03960 ArsC family 5 113 6.7E-24 T 12-10-2018 IPR006660 Arsenate reductase-like N288_07655 d091c15526878855c6f07b8ef698975b 131 Gene3D G3DSA:3.40.30.10 1 131 1.5E-47 T 12-10-2018 N288_07655 d091c15526878855c6f07b8ef698975b 131 Hamap MF_01132 Regulatory protein Spx [spxA]. 1 131 38.037 T 12-10-2018 IPR023731 Regulatory protein Spx GO:0045892 N288_07655 d091c15526878855c6f07b8ef698975b 131 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 4.7E-38 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR N288_07655 d091c15526878855c6f07b8ef698975b 131 SUPERFAMILY SSF52833 1 129 8.53E-40 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_16085 0d8c356690d285fa47bf613d6c9bb180 311 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 15 190 9.1E-42 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain N288_16085 0d8c356690d285fa47bf613d6c9bb180 311 Gene3D G3DSA:3.40.50.300 10 211 7.4E-47 T 12-10-2018 N288_16085 0d8c356690d285fa47bf613d6c9bb180 311 SUPERFAMILY SSF52540 12 184 2.52E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_16085 0d8c356690d285fa47bf613d6c9bb180 311 SMART SM00833 226 311 2.1E-13 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal N288_16085 0d8c356690d285fa47bf613d6c9bb180 311 SUPERFAMILY SSF90002 227 309 6.93E-10 T 12-10-2018 N288_16085 0d8c356690d285fa47bf613d6c9bb180 311 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 228 310 9.4E-13 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal N288_20795 ed60880e0766e2a35586fcca57637a69 125 Pfam PF03334 Na+/H+ antiporter subunit 14 95 1.5E-28 T 12-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 N288_20795 ed60880e0766e2a35586fcca57637a69 125 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 13 109 7.3E-32 T 12-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 N288_11360 4d509987dacfcd875408b6230d4dbf11 283 Gene3D G3DSA:3.40.50.720 3 264 7.8E-100 T 12-10-2018 N288_11360 4d509987dacfcd875408b6230d4dbf11 283 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 275 8.1E-98 T 12-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 N288_11360 4d509987dacfcd875408b6230d4dbf11 283 Pfam PF04321 RmlD substrate binding domain 1 276 8.2E-96 T 12-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 N288_11360 4d509987dacfcd875408b6230d4dbf11 283 SUPERFAMILY SSF51735 1 276 2.07E-92 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_11360 4d509987dacfcd875408b6230d4dbf11 283 Gene3D G3DSA:3.90.25.10 159 270 7.8E-100 T 12-10-2018 N288_24565 177c652959d43a41f0de940d35690cf0 272 PIRSF PIRSF009141 11 272 5.1E-129 T 12-10-2018 IPR008535 Protein of unknown function DUF817 N288_24565 177c652959d43a41f0de940d35690cf0 272 Pfam PF05675 Protein of unknown function (DUF817) 24 258 8.6E-108 T 12-10-2018 IPR008535 Protein of unknown function DUF817 N288_02700 c900b5990643c71a607303e991f18a54 247 Pfam PF13411 MerR HTH family regulatory protein 3 71 5.7E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_02700 c900b5990643c71a607303e991f18a54 247 Gene3D G3DSA:1.10.490.50 158 247 1.8E-18 T 12-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain N288_02700 c900b5990643c71a607303e991f18a54 247 SMART SM00422 3 72 9.2E-29 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_02700 c900b5990643c71a607303e991f18a54 247 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 7.1E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_02700 c900b5990643c71a607303e991f18a54 247 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 7.1E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_02700 c900b5990643c71a607303e991f18a54 247 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 7.1E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_02700 c900b5990643c71a607303e991f18a54 247 Gene3D G3DSA:1.10.1660.10 1 139 1.8E-50 T 12-10-2018 N288_02700 c900b5990643c71a607303e991f18a54 247 SUPERFAMILY SSF89082 159 246 1.57E-25 T 12-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain N288_02700 c900b5990643c71a607303e991f18a54 247 Pfam PF07739 TipAS antibiotic-recognition domain 130 242 1.1E-34 T 12-10-2018 IPR012925 TipAS antibiotic-recognition domain N288_02700 c900b5990643c71a607303e991f18a54 247 SUPERFAMILY SSF46955 3 115 2.49E-29 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily N288_04770 b3b1a4842a5fc6318819141f00f33ad5 119 SUPERFAMILY SSF54909 1 87 2.95E-10 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel N288_04770 b3b1a4842a5fc6318819141f00f33ad5 119 Gene3D G3DSA:3.30.70.100 1 94 5.9E-8 T 12-10-2018 N288_04770 b3b1a4842a5fc6318819141f00f33ad5 119 Pfam PF07978 NIPSNAP 7 81 2.4E-8 T 12-10-2018 IPR012577 NIPSNAP N288_25350 63d8191a506e2b290fda9345a08e1a69 308 SMART SM00382 31 212 3.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_25350 63d8191a506e2b290fda9345a08e1a69 308 SUPERFAMILY SSF52540 3 228 2.82E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_25350 63d8191a506e2b290fda9345a08e1a69 308 Gene3D G3DSA:3.40.50.300 1 231 1.5E-63 T 12-10-2018 N288_25350 63d8191a506e2b290fda9345a08e1a69 308 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_25350 63d8191a506e2b290fda9345a08e1a69 308 Pfam PF00005 ABC transporter 23 163 3.5E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_01290 9309b502c061a188fa310de32153a504 487 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_01290 9309b502c061a188fa310de32153a504 487 Gene3D G3DSA:3.40.50.300 1 255 1.5E-72 T 12-10-2018 N288_01290 9309b502c061a188fa310de32153a504 487 Pfam PF01955 Adenosylcobinamide amidohydrolase 286 473 9.0E-54 T 12-10-2018 IPR002808 Adenosylcobinamide amidohydrolase, CbiZ N288_01290 9309b502c061a188fa310de32153a504 487 SUPERFAMILY SSF52540 2 233 4.09E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_01290 9309b502c061a188fa310de32153a504 487 SMART SM00382 26 233 3.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_01290 9309b502c061a188fa310de32153a504 487 Pfam PF00005 ABC transporter 18 167 1.4E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_25285 486187eaa1024025ef8ed3f4935cd888 156 SUPERFAMILY SSF109854 9 156 1.5E-30 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_25285 486187eaa1024025ef8ed3f4935cd888 156 Pfam PF12867 DinB superfamily 11 140 7.8E-13 T 12-10-2018 IPR024775 DinB-like domain N288_25285 486187eaa1024025ef8ed3f4935cd888 156 Gene3D G3DSA:1.20.120.450 2 148 1.8E-22 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_07860 40eeaa9e15836b4409a48ccb5bcdc41a 323 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 139 160 - T 12-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 N288_07860 40eeaa9e15836b4409a48ccb5bcdc41a 323 Gene3D G3DSA:3.40.50.720 122 267 9.2E-102 T 12-10-2018 N288_07860 40eeaa9e15836b4409a48ccb5bcdc41a 323 SMART SM00829 10 321 1.3E-46 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 N288_07860 40eeaa9e15836b4409a48ccb5bcdc41a 323 SUPERFAMILY SSF51735 111 289 5.92E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_07860 40eeaa9e15836b4409a48ccb5bcdc41a 323 SUPERFAMILY SSF50129 1 139 1.46E-40 T 12-10-2018 IPR011032 GroES-like superfamily N288_07860 40eeaa9e15836b4409a48ccb5bcdc41a 323 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 6.8E-9 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 N288_07860 40eeaa9e15836b4409a48ccb5bcdc41a 323 Pfam PF00107 Zinc-binding dehydrogenase 150 275 3.1E-33 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 N288_07860 40eeaa9e15836b4409a48ccb5bcdc41a 323 Gene3D G3DSA:3.90.180.10 9 320 9.2E-102 T 12-10-2018 N288_24300 9a3ae51fb266d7374b9093ae8c6be234 178 ProSitePatterns PS00194 Thioredoxin family active site. 70 88 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 N288_24300 9a3ae51fb266d7374b9093ae8c6be234 178 SUPERFAMILY SSF52833 11 175 1.02E-39 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_24300 9a3ae51fb266d7374b9093ae8c6be234 178 Gene3D G3DSA:3.40.30.10 33 178 6.6E-43 T 12-10-2018 N288_24300 9a3ae51fb266d7374b9093ae8c6be234 178 Pfam PF00578 AhpC/TSA family 43 157 4.6E-33 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 N288_22115 c55efec2b4cdccc10baadee00dddb829 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 178 1.5E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_22115 c55efec2b4cdccc10baadee00dddb829 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 206 1.5E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_22115 c55efec2b4cdccc10baadee00dddb829 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 194 1.5E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_22115 c55efec2b4cdccc10baadee00dddb829 227 SMART SM00448 3 116 5.9E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_22115 c55efec2b4cdccc10baadee00dddb829 227 ProSitePatterns PS00622 LuxR-type HTH domain signature. 178 205 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_22115 c55efec2b4cdccc10baadee00dddb829 227 SUPERFAMILY SSF52172 3 134 7.83E-35 T 12-10-2018 IPR011006 CheY-like superfamily N288_22115 c55efec2b4cdccc10baadee00dddb829 227 SMART SM00421 161 218 5.8E-29 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_22115 c55efec2b4cdccc10baadee00dddb829 227 SUPERFAMILY SSF46894 154 225 2.58E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_22115 c55efec2b4cdccc10baadee00dddb829 227 Pfam PF00072 Response regulator receiver domain 5 117 3.2E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_22115 c55efec2b4cdccc10baadee00dddb829 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 218 2.5E-24 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_22115 c55efec2b4cdccc10baadee00dddb829 227 Gene3D G3DSA:3.40.50.12740 3 224 1.9E-71 T 12-10-2018 N288_16300 b2cd130cc768b589a2fb092ff7f60069 382 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 5 381 1.3E-67 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 N288_16300 b2cd130cc768b589a2fb092ff7f60069 382 Gene3D G3DSA:3.30.300.210 232 382 5.9E-21 T 12-10-2018 IPR038501 Spore germination GerAC superfamily N288_16300 b2cd130cc768b589a2fb092ff7f60069 382 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 197 379 1.8E-30 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 N288_01550 c67a3ec45fb85f6ca0be783076585023 157 Pfam PF13581 Histidine kinase-like ATPase domain 12 141 6.0E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_01550 c67a3ec45fb85f6ca0be783076585023 157 SUPERFAMILY SSF55874 33 138 1.43E-14 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_01550 c67a3ec45fb85f6ca0be783076585023 157 Hamap MF_00638 Serine-protein kinase RsbW [rsbW]. 2 157 41.083 T 12-10-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 N288_01550 c67a3ec45fb85f6ca0be783076585023 157 Gene3D G3DSA:3.30.565.10 4 151 7.8E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_01550 c67a3ec45fb85f6ca0be783076585023 157 TIGRFAM TIGR01924 rsbW_low_gc: anti-sigma B factor 2 153 1.2E-72 T 12-10-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 N288_24560 22582fc84ccdbb4353f71b6e1731aee9 481 Gene3D G3DSA:2.40.110.10 147 272 4.9E-37 T 12-10-2018 N288_24560 22582fc84ccdbb4353f71b6e1731aee9 481 SUPERFAMILY SSF56645 3 271 1.31E-68 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 N288_24560 22582fc84ccdbb4353f71b6e1731aee9 481 Gene3D G3DSA:1.10.3140.10 2 146 1.1E-40 T 12-10-2018 N288_24560 22582fc84ccdbb4353f71b6e1731aee9 481 Gene3D G3DSA:1.20.140.10 273 481 2.3E-74 T 12-10-2018 N288_24560 22582fc84ccdbb4353f71b6e1731aee9 481 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 6 270 1.1E-82 T 12-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal N288_24560 22582fc84ccdbb4353f71b6e1731aee9 481 PIRSF PIRSF000331 1 481 2.6E-139 T 12-10-2018 IPR004925 HpaB/PvcC/4-BUDH N288_24560 22582fc84ccdbb4353f71b6e1731aee9 481 TIGRFAM TIGR02309 HpaB-1: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 4 477 1.4E-152 T 12-10-2018 IPR012687 4-HPA 3-monooxygenase large component, Deinococcus-type GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431 N288_24560 22582fc84ccdbb4353f71b6e1731aee9 481 SUPERFAMILY SSF47203 261 476 1.57E-56 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 N288_24560 22582fc84ccdbb4353f71b6e1731aee9 481 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 282 475 7.7E-61 T 12-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal N288_08120 dfe192bf01761496485a4673cbab69ab 44 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 17 40 1.9E-9 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like N288_08120 dfe192bf01761496485a4673cbab69ab 44 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 19 42 1.3E-12 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like N288_14160 b9c67284551024e21e97027c29d0fe79 307 Pfam PF00480 ROK family 5 293 9.1E-46 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 N288_14160 b9c67284551024e21e97027c29d0fe79 307 Gene3D G3DSA:3.30.420.40 106 301 1.2E-46 T 12-10-2018 N288_14160 b9c67284551024e21e97027c29d0fe79 307 SUPERFAMILY SSF53067 3 296 3.65E-57 T 12-10-2018 N288_14160 b9c67284551024e21e97027c29d0fe79 307 Gene3D G3DSA:3.30.420.40 1 105 2.4E-24 T 12-10-2018 N288_07975 2fe8b286779026d49a5c759a84445f57 306 Pfam PF02016 LD-carboxypeptidase 14 291 4.3E-78 T 12-10-2018 IPR003507 Peptidase family S66 N288_07975 2fe8b286779026d49a5c759a84445f57 306 Gene3D G3DSA:3.50.30.60 167 300 2.1E-40 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily N288_07975 2fe8b286779026d49a5c759a84445f57 306 PIRSF PIRSF028757 2 305 2.8E-84 T 12-10-2018 IPR003507 Peptidase family S66 N288_07975 2fe8b286779026d49a5c759a84445f57 306 SUPERFAMILY SSF141986 144 298 6.41E-40 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily N288_07975 2fe8b286779026d49a5c759a84445f57 306 SUPERFAMILY SSF52317 3 155 6.87E-50 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_07975 2fe8b286779026d49a5c759a84445f57 306 Gene3D G3DSA:3.40.50.10740 2 159 8.0E-55 T 12-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal N288_19690 8cbdc6a06b9a350e78fda02bc4019791 439 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 1.4E-5 T 12-10-2018 N288_19690 8cbdc6a06b9a350e78fda02bc4019791 439 Gene3D G3DSA:3.40.1390.20 70 178 5.9E-25 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily N288_19690 8cbdc6a06b9a350e78fda02bc4019791 439 Gene3D G3DSA:3.10.129.10 310 434 3.2E-11 T 12-10-2018 N288_19690 8cbdc6a06b9a350e78fda02bc4019791 439 Pfam PF03061 Thioesterase superfamily 353 425 2.3E-11 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 N288_19690 8cbdc6a06b9a350e78fda02bc4019791 439 Gene3D G3DSA:1.10.10.10 5 69 1.5E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_19690 8cbdc6a06b9a350e78fda02bc4019791 439 Gene3D G3DSA:3.10.580.10 186 309 9.7E-24 T 12-10-2018 N288_19690 8cbdc6a06b9a350e78fda02bc4019791 439 SUPERFAMILY SSF75138 72 185 1.83E-28 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily N288_19690 8cbdc6a06b9a350e78fda02bc4019791 439 SUPERFAMILY SSF54637 336 437 9.97E-21 T 12-10-2018 IPR029069 HotDog domain superfamily N288_19690 8cbdc6a06b9a350e78fda02bc4019791 439 Pfam PF07085 DRTGG domain 76 178 7.8E-30 T 12-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 N288_19690 8cbdc6a06b9a350e78fda02bc4019791 439 SUPERFAMILY SSF46785 5 54 1.52E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_19690 8cbdc6a06b9a350e78fda02bc4019791 439 SMART SM00116 200 248 3.0 T 12-10-2018 IPR000644 CBS domain N288_19690 8cbdc6a06b9a350e78fda02bc4019791 439 SMART SM00116 259 307 7.1E-6 T 12-10-2018 IPR000644 CBS domain N288_19690 8cbdc6a06b9a350e78fda02bc4019791 439 SUPERFAMILY SSF54631 182 307 1.77E-28 T 12-10-2018 N288_19690 8cbdc6a06b9a350e78fda02bc4019791 439 Pfam PF00571 CBS domain 254 307 8.1E-8 T 12-10-2018 IPR000644 CBS domain N288_19690 8cbdc6a06b9a350e78fda02bc4019791 439 Pfam PF00571 CBS domain 192 245 1.6E-4 T 12-10-2018 IPR000644 CBS domain N288_19975 2ca40e56a1dedefa7cf4871960e063bd 266 Pfam PF07285 Protein of unknown function (DUF1444) 3 266 1.8E-133 T 12-10-2018 IPR010838 Protein of unknown unction DUF1444 N288_19975 2ca40e56a1dedefa7cf4871960e063bd 266 PIRSF PIRSF012562 1 266 1.1E-135 T 12-10-2018 IPR010838 Protein of unknown unction DUF1444 N288_19975 2ca40e56a1dedefa7cf4871960e063bd 266 Hamap MF_01548 UPF0354 protein . 3 266 47.904 T 12-10-2018 IPR010838 Protein of unknown unction DUF1444 N288_00115 be8d5a1a6a162eb3213fe9ec1e1324b5 222 Pfam PF01712 Deoxynucleoside kinase 15 214 3.8E-65 T 12-10-2018 IPR031314 Deoxynucleoside kinase domain N288_00115 be8d5a1a6a162eb3213fe9ec1e1324b5 222 Gene3D G3DSA:3.40.50.300 12 217 1.1E-57 T 12-10-2018 N288_00115 be8d5a1a6a162eb3213fe9ec1e1324b5 222 SUPERFAMILY SSF52540 14 211 1.05E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00115 be8d5a1a6a162eb3213fe9ec1e1324b5 222 PIRSF PIRSF000705 2 220 1.1E-64 T 12-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 N288_14440 9716c3bf238896eb6c3013a4a86c0594 416 Pfam PF07690 Major Facilitator Superfamily 25 253 8.8E-21 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_14440 9716c3bf238896eb6c3013a4a86c0594 416 Gene3D G3DSA:1.20.1250.20 8 402 3.2E-40 T 12-10-2018 N288_14440 9716c3bf238896eb6c3013a4a86c0594 416 SUPERFAMILY SSF103473 18 403 1.44E-44 T 12-10-2018 IPR036259 MFS transporter superfamily N288_23350 712d85c597cd6a69b16b7c1253225662 1527 SMART SM00736 1213 1297 0.0056 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 N288_23350 712d85c597cd6a69b16b7c1253225662 1527 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 442 506 3.1E-22 T 12-10-2018 N288_23350 712d85c597cd6a69b16b7c1253225662 1527 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 187 251 8.5E-19 T 12-10-2018 N288_23350 712d85c597cd6a69b16b7c1253225662 1527 Gene3D G3DSA:2.60.40.10 1200 1305 2.5E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_23350 712d85c597cd6a69b16b7c1253225662 1527 Pfam PF04231 Endonuclease I 1310 1517 1.4E-46 T 12-10-2018 IPR007346 Endonuclease I GO:0004518 N288_23350 712d85c597cd6a69b16b7c1253225662 1527 SUPERFAMILY SSF56219 774 1074 8.9E-34 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily N288_23350 712d85c597cd6a69b16b7c1253225662 1527 Gene3D G3DSA:3.60.10.10 776 1077 2.2E-45 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily N288_23350 712d85c597cd6a69b16b7c1253225662 1527 SUPERFAMILY SSF54060 1307 1517 3.88E-57 T 12-10-2018 N288_00270 7915ada7c84ef0c725ffb32211b0e313 397 Gene3D G3DSA:2.40.40.10 310 389 4.4E-6 T 12-10-2018 IPR036908 RlpA-like domain superfamily N288_00270 7915ada7c84ef0c725ffb32211b0e313 397 Pfam PF07501 G5 domain 212 284 1.8E-20 T 12-10-2018 IPR011098 G5 domain N288_00270 7915ada7c84ef0c725ffb32211b0e313 397 Gene3D G3DSA:2.20.230.10 120 284 1.5E-17 T 12-10-2018 N288_00270 7915ada7c84ef0c725ffb32211b0e313 397 Pfam PF06725 3D domain 336 396 2.5E-23 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 N288_00270 7915ada7c84ef0c725ffb32211b0e313 397 SUPERFAMILY SSF50685 338 387 8.02E-10 T 12-10-2018 IPR036908 RlpA-like domain superfamily N288_00270 7915ada7c84ef0c725ffb32211b0e313 397 Pfam PF03990 Domain of unknown function (DUF348) 40 78 1.3E-8 T 12-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 N288_00270 7915ada7c84ef0c725ffb32211b0e313 397 Pfam PF03990 Domain of unknown function (DUF348) 154 194 8.7E-11 T 12-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 N288_00270 7915ada7c84ef0c725ffb32211b0e313 397 Pfam PF03990 Domain of unknown function (DUF348) 97 137 1.2E-12 T 12-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 N288_00270 7915ada7c84ef0c725ffb32211b0e313 397 SMART SM01208 207 285 9.8E-26 T 12-10-2018 IPR011098 G5 domain N288_18455 59c28c8bbfa7276af4d0e0e85ecc34e7 306 Pfam PF02690 Na+/Pi-cotransporter 159 251 4.5E-18 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 N288_18455 59c28c8bbfa7276af4d0e0e85ecc34e7 306 Pfam PF02690 Na+/Pi-cotransporter 13 145 3.7E-35 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 N288_18455 59c28c8bbfa7276af4d0e0e85ecc34e7 306 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 303 9.5E-71 T 12-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 N288_12050 37f183c8637c504946e7230251e12464 320 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 45 56 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site N288_12050 37f183c8637c504946e7230251e12464 320 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 242 252 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site N288_12050 37f183c8637c504946e7230251e12464 320 Gene3D G3DSA:3.40.50.200 3 306 2.4E-109 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 N288_12050 37f183c8637c504946e7230251e12464 320 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 86 96 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site N288_12050 37f183c8637c504946e7230251e12464 320 Pfam PF00082 Subtilase family 40 288 3.6E-60 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 N288_12050 37f183c8637c504946e7230251e12464 320 SUPERFAMILY SSF52743 23 291 7.99E-88 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 N288_12050 37f183c8637c504946e7230251e12464 320 PRINTS PR00723 Subtilisin serine protease family (S8) signature 82 95 3.0E-23 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_12050 37f183c8637c504946e7230251e12464 320 PRINTS PR00723 Subtilisin serine protease family (S8) signature 241 257 3.0E-23 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_12050 37f183c8637c504946e7230251e12464 320 PRINTS PR00723 Subtilisin serine protease family (S8) signature 40 59 3.0E-23 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_25470 e428ced7a9c01b3ee1af2685741032e5 151 Gene3D G3DSA:3.40.630.30 3 135 4.0E-25 T 12-10-2018 N288_25470 e428ced7a9c01b3ee1af2685741032e5 151 SUPERFAMILY SSF55729 21 131 2.33E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_25470 e428ced7a9c01b3ee1af2685741032e5 151 Pfam PF13673 Acetyltransferase (GNAT) domain 41 133 6.9E-12 T 12-10-2018 IPR000182 GNAT domain N288_05170 95f0fb4517e4c9d83ab342938e3b6a0c 286 SUPERFAMILY SSF103481 42 139 2.62E-11 T 12-10-2018 N288_05170 95f0fb4517e4c9d83ab342938e3b6a0c 286 Pfam PF00892 EamA-like transporter family 2 136 1.9E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_05170 95f0fb4517e4c9d83ab342938e3b6a0c 286 Pfam PF00892 EamA-like transporter family 151 285 3.2E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_05170 95f0fb4517e4c9d83ab342938e3b6a0c 286 SUPERFAMILY SSF103481 196 285 7.19E-11 T 12-10-2018 N288_02055 bb97bfe5ccfab5f800cc3bb9c6f4ec80 177 Pfam PF04542 Sigma-70 region 2 16 76 4.0E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_02055 bb97bfe5ccfab5f800cc3bb9c6f4ec80 177 Pfam PF08281 Sigma-70, region 4 114 160 4.7E-14 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_02055 bb97bfe5ccfab5f800cc3bb9c6f4ec80 177 SUPERFAMILY SSF88659 98 163 1.05E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_02055 bb97bfe5ccfab5f800cc3bb9c6f4ec80 177 SUPERFAMILY SSF88946 8 83 1.37E-18 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_02055 bb97bfe5ccfab5f800cc3bb9c6f4ec80 177 Gene3D G3DSA:1.10.10.10 93 168 1.8E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_02055 bb97bfe5ccfab5f800cc3bb9c6f4ec80 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 163 3.4E-26 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_02055 bb97bfe5ccfab5f800cc3bb9c6f4ec80 177 Gene3D G3DSA:1.10.1740.10 2 91 1.8E-19 T 12-10-2018 N288_18035 b16973d17c509dc1456042c330484e7c 145 PIRSF PIRSF021292 2 145 3.3E-34 T 12-10-2018 IPR016785 ComG operon protein 4 GO:0030420 N288_18035 b16973d17c509dc1456042c330484e7c 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site N288_10860 3103f7154b4c4ac773237163370b61d0 97 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 8 91 2.6E-27 T 12-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane N288_10860 3103f7154b4c4ac773237163370b61d0 97 Pfam PF12823 Domain of unknown function (DUF3817) 6 93 2.0E-22 T 12-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane N288_20730 e7b42cdc83ceddec36e77a541e6b6443 251 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 86 101 6.1E-19 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 N288_20730 e7b42cdc83ceddec36e77a541e6b6443 251 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 112 124 6.1E-19 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 N288_20730 e7b42cdc83ceddec36e77a541e6b6443 251 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 169 181 6.1E-19 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 N288_20730 e7b42cdc83ceddec36e77a541e6b6443 251 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 154 169 6.1E-19 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 N288_20730 e7b42cdc83ceddec36e77a541e6b6443 251 Gene3D G3DSA:2.40.100.10 196 251 5.2E-15 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily N288_20730 e7b42cdc83ceddec36e77a541e6b6443 251 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 107 124 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 N288_20730 e7b42cdc83ceddec36e77a541e6b6443 251 Gene3D G3DSA:2.40.100.10 47 185 2.5E-50 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily N288_20730 e7b42cdc83ceddec36e77a541e6b6443 251 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 73 249 1.2E-53 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 N288_20730 e7b42cdc83ceddec36e77a541e6b6443 251 SUPERFAMILY SSF50891 72 250 1.75E-61 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily N288_11375 00fc2867a4d0f68a97fb96d3481b8d65 212 Gene3D G3DSA:3.40.50.20 1 89 4.5E-13 T 12-10-2018 N288_11375 00fc2867a4d0f68a97fb96d3481b8d65 212 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 165 193 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 N288_11375 00fc2867a4d0f68a97fb96d3481b8d65 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 156 190 6.6E-5 T 12-10-2018 IPR001451 Hexapeptide repeat N288_11375 00fc2867a4d0f68a97fb96d3481b8d65 212 Gene3D G3DSA:2.160.10.10 91 205 2.7E-24 T 12-10-2018 N288_11375 00fc2867a4d0f68a97fb96d3481b8d65 212 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 3 204 9.2E-61 T 12-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like N288_11375 00fc2867a4d0f68a97fb96d3481b8d65 212 SUPERFAMILY SSF51161 1 210 8.18E-35 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily N288_14500 a82a66b04f7eea5f13ddb6e7f3fe7ae7 286 SUPERFAMILY SSF103481 39 137 1.44E-15 T 12-10-2018 N288_14500 a82a66b04f7eea5f13ddb6e7f3fe7ae7 286 Pfam PF00892 EamA-like transporter family 6 136 3.4E-21 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_14500 a82a66b04f7eea5f13ddb6e7f3fe7ae7 286 Pfam PF00892 EamA-like transporter family 144 278 7.0E-22 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_14500 a82a66b04f7eea5f13ddb6e7f3fe7ae7 286 SUPERFAMILY SSF103481 178 280 5.56E-15 T 12-10-2018 N288_07830 824a7c04ddbace5884a0065975529eb0 259 Gene3D G3DSA:3.90.226.10 1 200 4.1E-70 T 12-10-2018 N288_07830 824a7c04ddbace5884a0065975529eb0 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 N288_07830 824a7c04ddbace5884a0065975529eb0 259 Gene3D G3DSA:1.10.12.10 202 258 9.2E-20 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal N288_07830 824a7c04ddbace5884a0065975529eb0 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 258 4.1E-70 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 N288_07830 824a7c04ddbace5884a0065975529eb0 259 SUPERFAMILY SSF52096 3 259 2.73E-85 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_09495 f47351e5cc4496a23f2ba93836b2a15d 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 8.5E-7 T 12-10-2018 N288_09495 f47351e5cc4496a23f2ba93836b2a15d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.0E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_09495 f47351e5cc4496a23f2ba93836b2a15d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.0E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_09495 f47351e5cc4496a23f2ba93836b2a15d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.0E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_09495 f47351e5cc4496a23f2ba93836b2a15d 247 Gene3D G3DSA:3.40.50.720 5 247 6.4E-97 T 12-10-2018 N288_09495 f47351e5cc4496a23f2ba93836b2a15d 247 SUPERFAMILY SSF51735 4 247 6.76E-98 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_09495 f47351e5cc4496a23f2ba93836b2a15d 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 8.8E-77 T 12-10-2018 N288_09495 f47351e5cc4496a23f2ba93836b2a15d 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 246 1.7E-110 T 12-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 N288_09495 f47351e5cc4496a23f2ba93836b2a15d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.2E-51 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_09495 f47351e5cc4496a23f2ba93836b2a15d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.2E-51 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_09495 f47351e5cc4496a23f2ba93836b2a15d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.2E-51 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_09495 f47351e5cc4496a23f2ba93836b2a15d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.2E-51 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_09495 f47351e5cc4496a23f2ba93836b2a15d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 5.2E-51 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_09495 f47351e5cc4496a23f2ba93836b2a15d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.2E-51 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_17450 099de5b88020b8e00f3b5b6907046871 273 SUPERFAMILY SSF53167 3 271 7.46E-104 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 N288_17450 099de5b88020b8e00f3b5b6907046871 273 Gene3D G3DSA:3.40.50.1580 1 270 7.9E-118 T 12-10-2018 N288_17450 099de5b88020b8e00f3b5b6907046871 273 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 22 268 1.6E-113 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 N288_17450 099de5b88020b8e00f3b5b6907046871 273 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 22 268 2.3E-121 T 12-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 N288_17450 099de5b88020b8e00f3b5b6907046871 273 Pfam PF01048 Phosphorylase superfamily 22 268 4.8E-55 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 N288_17450 099de5b88020b8e00f3b5b6907046871 273 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 75 116 - T 12-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 N288_17450 099de5b88020b8e00f3b5b6907046871 273 PIRSF PIRSF000477 2 271 1.3E-120 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 N288_12135 3107b46459c04f44507e03ea797fed7a 295 Gene3D G3DSA:3.40.33.10 43 293 4.8E-60 T 12-10-2018 IPR035940 CAP superfamily N288_12135 3107b46459c04f44507e03ea797fed7a 295 Pfam PF00188 Cysteine-rich secretory protein family 180 291 3.4E-20 T 12-10-2018 IPR014044 CAP domain N288_12135 3107b46459c04f44507e03ea797fed7a 295 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 172 294 1.2E-54 T 12-10-2018 IPR014258 CAP domain, YkwD-like N288_12135 3107b46459c04f44507e03ea797fed7a 295 SUPERFAMILY SSF55797 172 292 5.23E-24 T 12-10-2018 IPR035940 CAP superfamily N288_25770 d29e0bbf3c93e74b304f79691b9be884 480 Pfam PF00270 DEAD/DEAH box helicase 27 192 3.2E-47 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 N288_25770 d29e0bbf3c93e74b304f79691b9be884 480 Gene3D G3DSA:3.30.70.330 405 480 4.1E-27 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily N288_25770 d29e0bbf3c93e74b304f79691b9be884 480 Pfam PF03880 DbpA RNA binding domain 407 476 1.7E-18 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain N288_25770 d29e0bbf3c93e74b304f79691b9be884 480 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 150 158 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site N288_25770 d29e0bbf3c93e74b304f79691b9be884 480 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 5 479 70.543 T 12-10-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 N288_25770 d29e0bbf3c93e74b304f79691b9be884 480 SUPERFAMILY SSF52540 71 358 3.07E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_25770 d29e0bbf3c93e74b304f79691b9be884 480 SMART SM00490 255 336 2.1E-32 T 12-10-2018 IPR001650 Helicase, C-terminal N288_25770 d29e0bbf3c93e74b304f79691b9be884 480 Pfam PF00271 Helicase conserved C-terminal domain 228 336 7.6E-29 T 12-10-2018 IPR001650 Helicase, C-terminal N288_25770 d29e0bbf3c93e74b304f79691b9be884 480 SMART SM00487 22 219 1.9E-57 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_25770 d29e0bbf3c93e74b304f79691b9be884 480 Gene3D G3DSA:3.40.50.300 209 369 6.7E-51 T 12-10-2018 N288_25770 d29e0bbf3c93e74b304f79691b9be884 480 Gene3D G3DSA:3.40.50.300 1 208 5.4E-71 T 12-10-2018 N288_02870 46f958668b57de045850eff708f116b5 498 Pfam PF01593 Flavin containing amine oxidoreductase 13 485 8.8E-24 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 N288_02870 46f958668b57de045850eff708f116b5 498 SUPERFAMILY SSF51905 2 492 5.61E-64 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_02870 46f958668b57de045850eff708f116b5 498 Gene3D G3DSA:3.50.50.60 3 115 5.1E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_02870 46f958668b57de045850eff708f116b5 498 Gene3D G3DSA:3.50.50.60 203 329 1.3E-14 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_02870 46f958668b57de045850eff708f116b5 498 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 6 495 1.4E-113 T 12-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 N288_18525 faf5764171d6d82a61745ac8a72991a5 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 1.4E-27 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_18525 faf5764171d6d82a61745ac8a72991a5 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 88 3.0E-14 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_18525 faf5764171d6d82a61745ac8a72991a5 88 Pfam PF01649 Ribosomal protein S20 2 84 2.0E-28 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_18525 faf5764171d6d82a61745ac8a72991a5 88 SUPERFAMILY SSF46992 3 86 4.45E-28 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_18525 faf5764171d6d82a61745ac8a72991a5 88 Gene3D G3DSA:1.20.58.110 1 87 1.5E-29 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_18525 faf5764171d6d82a61745ac8a72991a5 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.59 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_04650 48b6a5edacf3569d713f7685dbd97b6e 268 Gene3D G3DSA:3.20.20.100 1 268 1.8E-85 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily N288_04650 48b6a5edacf3569d713f7685dbd97b6e 268 Pfam PF00248 Aldo/keto reductase family 15 267 8.3E-47 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain N288_04650 48b6a5edacf3569d713f7685dbd97b6e 268 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 47 64 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 N288_04650 48b6a5edacf3569d713f7685dbd97b6e 268 PRINTS PR00069 Aldo-keto reductase signature 168 197 1.0E-30 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_04650 48b6a5edacf3569d713f7685dbd97b6e 268 PRINTS PR00069 Aldo-keto reductase signature 134 151 1.0E-30 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_04650 48b6a5edacf3569d713f7685dbd97b6e 268 PRINTS PR00069 Aldo-keto reductase signature 102 120 1.0E-30 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_04650 48b6a5edacf3569d713f7685dbd97b6e 268 PRINTS PR00069 Aldo-keto reductase signature 204 228 1.0E-30 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_04650 48b6a5edacf3569d713f7685dbd97b6e 268 PRINTS PR00069 Aldo-keto reductase signature 43 67 1.0E-30 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_04650 48b6a5edacf3569d713f7685dbd97b6e 268 PIRSF PIRSF000097 1 268 2.6E-57 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_04650 48b6a5edacf3569d713f7685dbd97b6e 268 SUPERFAMILY SSF51430 3 268 5.11E-73 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily N288_14200 7191428331d565b98860be15e1271a4b 283 Pfam PF00805 Pentapeptide repeats (8 copies) 219 254 1.2E-8 T 12-10-2018 IPR001646 Pentapeptide repeat N288_14200 7191428331d565b98860be15e1271a4b 283 Gene3D G3DSA:2.160.20.100 190 270 5.4E-15 T 12-10-2018 N288_14200 7191428331d565b98860be15e1271a4b 283 SUPERFAMILY SSF141571 63 256 4.97E-18 T 12-10-2018 N288_16475 63bd00c70d814649d1134755b3faa555 1032 Pfam PF00583 Acetyltransferase (GNAT) family 51 137 4.2E-13 T 12-10-2018 IPR000182 GNAT domain N288_16475 63bd00c70d814649d1134755b3faa555 1032 SUPERFAMILY SSF55729 5 144 7.85E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_16475 63bd00c70d814649d1134755b3faa555 1032 Gene3D G3DSA:3.40.630.30 11 158 3.4E-20 T 12-10-2018 N288_15630 5693f291fcfaf7a2c91afe8854d8cbd8 467 Pfam PF00425 chorismate binding enzyme 201 454 3.2E-101 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal N288_15630 5693f291fcfaf7a2c91afe8854d8cbd8 467 PRINTS PR00095 Anthranilate synthase component I signature 302 315 1.6E-22 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 N288_15630 5693f291fcfaf7a2c91afe8854d8cbd8 467 PRINTS PR00095 Anthranilate synthase component I signature 396 410 1.6E-22 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 N288_15630 5693f291fcfaf7a2c91afe8854d8cbd8 467 PRINTS PR00095 Anthranilate synthase component I signature 316 329 1.6E-22 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 N288_15630 5693f291fcfaf7a2c91afe8854d8cbd8 467 PRINTS PR00095 Anthranilate synthase component I signature 411 425 1.6E-22 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 N288_15630 5693f291fcfaf7a2c91afe8854d8cbd8 467 SUPERFAMILY SSF56322 14 460 3.66E-151 T 12-10-2018 IPR005801 ADC synthase GO:0009058 N288_15630 5693f291fcfaf7a2c91afe8854d8cbd8 467 Pfam PF04715 Anthranilate synthase component I, N terminal region 18 153 9.4E-35 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 N288_15630 5693f291fcfaf7a2c91afe8854d8cbd8 467 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 18 460 3.6E-173 T 12-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 N288_15630 5693f291fcfaf7a2c91afe8854d8cbd8 467 Gene3D G3DSA:3.60.120.10 11 460 3.7E-170 T 12-10-2018 IPR005801 ADC synthase GO:0009058 N288_25940 c51c078a07d1a3dc5e750de439b3a1e4 383 Gene3D G3DSA:3.40.50.2000 195 355 2.8E-37 T 12-10-2018 N288_25940 c51c078a07d1a3dc5e750de439b3a1e4 383 Pfam PF13439 Glycosyltransferase Family 4 14 176 1.5E-26 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 N288_25940 c51c078a07d1a3dc5e750de439b3a1e4 383 Pfam PF00534 Glycosyl transferases group 1 184 349 1.3E-33 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 N288_25940 c51c078a07d1a3dc5e750de439b3a1e4 383 Gene3D G3DSA:3.40.50.2000 1 194 1.2E-29 T 12-10-2018 N288_25940 c51c078a07d1a3dc5e750de439b3a1e4 383 SUPERFAMILY SSF53756 2 371 7.18E-85 T 12-10-2018 N288_06525 a80647a417768489895e67ffe84b57f9 646 SUPERFAMILY SSF55804 508 646 2.22E-36 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 N288_06525 a80647a417768489895e67ffe84b57f9 646 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 10 348 3.4E-162 T 12-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 N288_06525 a80647a417768489895e67ffe84b57f9 646 Gene3D G3DSA:3.40.50.2300 372 471 2.9E-37 T 12-10-2018 N288_06525 a80647a417768489895e67ffe84b57f9 646 Gene3D G3DSA:3.40.930.10 506 646 1.3E-41 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 N288_06525 a80647a417768489895e67ffe84b57f9 646 SUPERFAMILY SSF52794 379 468 3.84E-25 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 N288_06525 a80647a417768489895e67ffe84b57f9 646 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 509 645 3.3E-32 T 12-10-2018 IPR002178 PTS EIIA type-2 domain N288_06525 a80647a417768489895e67ffe84b57f9 646 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 553 569 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain N288_06525 a80647a417768489895e67ffe84b57f9 646 Pfam PF02378 Phosphotransferase system, EIIC 19 278 4.1E-18 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 N288_06525 a80647a417768489895e67ffe84b57f9 646 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 381 465 1.0E-11 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 N288_11060 ea41ccf83670bfadca20f6cf994f2e83 211 Pfam PF02525 Flavodoxin-like fold 3 206 1.1E-44 T 12-10-2018 IPR003680 Flavodoxin-like fold N288_11060 ea41ccf83670bfadca20f6cf994f2e83 211 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 211 27.287 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 N288_11060 ea41ccf83670bfadca20f6cf994f2e83 211 Gene3D G3DSA:3.40.50.360 1 211 2.2E-61 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_11060 ea41ccf83670bfadca20f6cf994f2e83 211 SUPERFAMILY SSF52218 1 211 3.22E-50 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_16520 5dfde441e00e7627fa3b4268420402dc 142 Gene3D G3DSA:1.10.10.10 2 73 6.0E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_16520 5dfde441e00e7627fa3b4268420402dc 142 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 63 123 9.4E-19 T 12-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 N288_16520 5dfde441e00e7627fa3b4268420402dc 142 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 3 60 5.6E-25 T 12-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 N288_16520 5dfde441e00e7627fa3b4268420402dc 142 SMART SM00529 24 123 3.3E-42 T 12-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 N288_16520 5dfde441e00e7627fa3b4268420402dc 142 Hamap MF_00732 Transcriptional regulator MntR [mntR]. 1 139 44.664 T 12-10-2018 IPR022897 HTH-type transcription regulator MntR N288_16520 5dfde441e00e7627fa3b4268420402dc 142 Gene3D G3DSA:1.10.60.10 74 142 1.0E-29 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 N288_16520 5dfde441e00e7627fa3b4268420402dc 142 SUPERFAMILY SSF47979 63 123 3.53E-18 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 N288_16520 5dfde441e00e7627fa3b4268420402dc 142 SUPERFAMILY SSF46785 3 62 4.44E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_15685 3efb1c1a1261d4137cd538bed4884b5f 624 SUPERFAMILY SSF52794 167 267 3.31E-37 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 N288_15685 3efb1c1a1261d4137cd538bed4884b5f 624 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 278 617 1.1E-136 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 N288_15685 3efb1c1a1261d4137cd538bed4884b5f 624 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain N288_15685 3efb1c1a1261d4137cd538bed4884b5f 624 Gene3D G3DSA:3.40.930.10 1 155 8.2E-47 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 N288_15685 3efb1c1a1261d4137cd538bed4884b5f 624 Gene3D G3DSA:3.40.50.2300 156 268 4.0E-42 T 12-10-2018 N288_15685 3efb1c1a1261d4137cd538bed4884b5f 624 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 169 258 1.1E-16 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 N288_15685 3efb1c1a1261d4137cd538bed4884b5f 624 Pfam PF02378 Phosphotransferase system, EIIC 294 563 6.3E-14 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 N288_15685 3efb1c1a1261d4137cd538bed4884b5f 624 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 133 6.4E-40 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 N288_15685 3efb1c1a1261d4137cd538bed4884b5f 624 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 147 1.6E-37 T 12-10-2018 IPR002178 PTS EIIA type-2 domain N288_15685 3efb1c1a1261d4137cd538bed4884b5f 624 SUPERFAMILY SSF55804 1 147 3.27E-42 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 N288_15685 3efb1c1a1261d4137cd538bed4884b5f 624 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 168 250 8.0E-31 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 N288_11100 542377e540085a8364bb8e226efc4700 350 Gene3D G3DSA:3.30.565.10 162 350 2.4E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_11100 542377e540085a8364bb8e226efc4700 350 SUPERFAMILY SSF55874 190 345 4.18E-21 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_11100 542377e540085a8364bb8e226efc4700 350 Pfam PF01022 Bacterial regulatory protein, arsR family 85 130 1.9E-5 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_11100 542377e540085a8364bb8e226efc4700 350 Gene3D G3DSA:1.10.10.10 68 153 7.8E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_11100 542377e540085a8364bb8e226efc4700 350 SUPERFAMILY SSF46785 74 172 1.9E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_11100 542377e540085a8364bb8e226efc4700 350 SMART SM00418 77 154 5.6E-4 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_20915 434d32fea0dcfb6828e8c3a436e9a234 332 Gene3D G3DSA:3.50.50.60 7 305 1.1E-118 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_20915 434d32fea0dcfb6828e8c3a436e9a234 332 SUPERFAMILY SSF51905 8 312 6.72E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_20915 434d32fea0dcfb6828e8c3a436e9a234 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 8.9E-26 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_20915 434d32fea0dcfb6828e8c3a436e9a234 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 113 121 8.9E-26 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_20915 434d32fea0dcfb6828e8c3a436e9a234 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 8.9E-26 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_20915 434d32fea0dcfb6828e8c3a436e9a234 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 8.9E-26 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_20915 434d32fea0dcfb6828e8c3a436e9a234 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 203 219 8.9E-26 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_20915 434d32fea0dcfb6828e8c3a436e9a234 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 8.9E-26 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_20915 434d32fea0dcfb6828e8c3a436e9a234 332 Hamap MF_01685 Ferredoxin--NADP reductase. 7 329 45.117 T 12-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 N288_20915 434d32fea0dcfb6828e8c3a436e9a234 332 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.2E-18 T 12-10-2018 N288_20915 434d32fea0dcfb6828e8c3a436e9a234 332 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 2.2E-18 T 12-10-2018 N288_20915 434d32fea0dcfb6828e8c3a436e9a234 332 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 2.2E-18 T 12-10-2018 N288_20915 434d32fea0dcfb6828e8c3a436e9a234 332 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 294 3.8E-31 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 N288_20915 434d32fea0dcfb6828e8c3a436e9a234 332 Gene3D G3DSA:3.50.50.60 128 247 1.1E-118 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_13675 e88576615428fe5cfc03ca2e15bb9958 258 ProSitePatterns PS01229 Hypothetical cof family signature 2. 205 227 - T 12-10-2018 N288_13675 e88576615428fe5cfc03ca2e15bb9958 258 Gene3D G3DSA:3.40.50.1000 4 249 2.3E-64 T 12-10-2018 IPR023214 HAD superfamily N288_13675 e88576615428fe5cfc03ca2e15bb9958 258 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 224 5.1E-25 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 N288_13675 e88576615428fe5cfc03ca2e15bb9958 258 Gene3D G3DSA:3.30.1240.10 81 180 2.3E-64 T 12-10-2018 N288_13675 e88576615428fe5cfc03ca2e15bb9958 258 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 251 1.9E-55 T 12-10-2018 N288_13675 e88576615428fe5cfc03ca2e15bb9958 258 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 251 3.8E-48 T 12-10-2018 IPR000150 Cof family GO:0016787 N288_13675 e88576615428fe5cfc03ca2e15bb9958 258 SUPERFAMILY SSF56784 3 255 2.21E-62 T 12-10-2018 IPR036412 HAD-like superfamily N288_23935 8837996853f0e5dcfc46c83e71fddf85 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 N288_23935 8837996853f0e5dcfc46c83e71fddf85 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 132 144 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 N288_23935 8837996853f0e5dcfc46c83e71fddf85 387 SUPERFAMILY SSF56645 3 250 3.93E-99 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 N288_23935 8837996853f0e5dcfc46c83e71fddf85 387 Gene3D G3DSA:2.40.110.10 129 242 4.2E-47 T 12-10-2018 N288_23935 8837996853f0e5dcfc46c83e71fddf85 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 126 5.1E-45 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 N288_23935 8837996853f0e5dcfc46c83e71fddf85 387 PIRSF PIRSF016578 5 378 5.0E-21 T 12-10-2018 N288_23935 8837996853f0e5dcfc46c83e71fddf85 387 SUPERFAMILY SSF47203 235 386 5.15E-61 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 N288_23935 8837996853f0e5dcfc46c83e71fddf85 387 Gene3D G3DSA:1.10.540.10 3 128 1.1E-49 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 N288_23935 8837996853f0e5dcfc46c83e71fddf85 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 237 384 9.8E-52 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 N288_23935 8837996853f0e5dcfc46c83e71fddf85 387 Gene3D G3DSA:1.20.140.10 243 387 3.7E-58 T 12-10-2018 N288_23935 8837996853f0e5dcfc46c83e71fddf85 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 225 3.8E-27 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 N288_23090 32457f0dde278da9f5682f0b91416043 432 SUPERFAMILY SSF53300 125 327 5.48E-24 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_23090 32457f0dde278da9f5682f0b91416043 432 SMART SM00327 133 321 2.8E-12 T 12-10-2018 IPR002035 von Willebrand factor, type A N288_23090 32457f0dde278da9f5682f0b91416043 432 Gene3D G3DSA:3.40.50.410 138 328 2.1E-30 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_23090 32457f0dde278da9f5682f0b91416043 432 Pfam PF00092 von Willebrand factor type A domain 135 319 3.6E-14 T 12-10-2018 IPR002035 von Willebrand factor, type A N288_24590 9d8b1c64f42bdff76ab4ef0caed063f4 177 Pfam PF07883 Cupin domain 63 138 1.1E-15 T 12-10-2018 IPR013096 Cupin 2, conserved barrel N288_24590 9d8b1c64f42bdff76ab4ef0caed063f4 177 SUPERFAMILY SSF51182 22 145 1.06E-28 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily N288_24590 9d8b1c64f42bdff76ab4ef0caed063f4 177 Gene3D G3DSA:2.60.120.10 38 164 5.1E-45 T 12-10-2018 IPR014710 RmlC-like jelly roll fold N288_24345 50b08aa48281be6bd01ec638cf8d0842 299 PIRSF PIRSF016184 1 299 8.1E-81 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 N288_24345 50b08aa48281be6bd01ec638cf8d0842 299 Gene3D G3DSA:3.10.310.10 128 288 2.6E-89 T 12-10-2018 N288_24345 50b08aa48281be6bd01ec638cf8d0842 299 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 297 1.4E-75 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 N288_24345 50b08aa48281be6bd01ec638cf8d0842 299 Pfam PF02567 Phenazine biosynthesis-like protein 9 295 4.6E-75 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 N288_24345 50b08aa48281be6bd01ec638cf8d0842 299 Gene3D G3DSA:3.10.310.10 7 290 2.6E-89 T 12-10-2018 N288_24345 50b08aa48281be6bd01ec638cf8d0842 299 SUPERFAMILY SSF54506 3 297 1.23E-68 T 12-10-2018 N288_17440 38c2bf429fe97cc8c316d3899e5afdec 391 Gene3D G3DSA:2.60.410.10 282 373 2.4E-22 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 N288_17440 38c2bf429fe97cc8c316d3899e5afdec 391 SUPERFAMILY SSF69189 282 375 2.55E-21 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 N288_17440 38c2bf429fe97cc8c316d3899e5afdec 391 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 282 373 7.2E-22 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 N288_17440 38c2bf429fe97cc8c316d3899e5afdec 391 SMART SM00936 282 373 2.6E-27 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 N288_17440 38c2bf429fe97cc8c316d3899e5afdec 391 SUPERFAMILY SSF56601 6 282 8.66E-79 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_17440 38c2bf429fe97cc8c316d3899e5afdec 391 Gene3D G3DSA:3.40.710.10 23 281 5.0E-88 T 12-10-2018 N288_17440 38c2bf429fe97cc8c316d3899e5afdec 391 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 262 5.3E-84 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 N288_17440 38c2bf429fe97cc8c316d3899e5afdec 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.2E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 N288_17440 38c2bf429fe97cc8c316d3899e5afdec 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 118 135 1.2E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 N288_17440 38c2bf429fe97cc8c316d3899e5afdec 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 145 158 1.2E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 N288_02165 a19c66a34ba27994173aae6e80a59ef5 339 Pfam PF00107 Zinc-binding dehydrogenase 159 291 7.1E-24 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 N288_02165 a19c66a34ba27994173aae6e80a59ef5 339 Gene3D G3DSA:3.40.50.720 127 304 3.2E-136 T 12-10-2018 N288_02165 a19c66a34ba27994173aae6e80a59ef5 339 Gene3D G3DSA:3.90.180.10 11 333 3.2E-136 T 12-10-2018 N288_02165 a19c66a34ba27994173aae6e80a59ef5 339 SMART SM00829 17 333 3.6E-6 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 N288_02165 a19c66a34ba27994173aae6e80a59ef5 339 SUPERFAMILY SSF51735 125 300 1.8E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_02165 a19c66a34ba27994173aae6e80a59ef5 339 Pfam PF16884 N-terminal domain of oxidoreductase 8 114 1.1E-38 T 12-10-2018 N288_02165 a19c66a34ba27994173aae6e80a59ef5 339 SUPERFAMILY SSF50129 5 144 1.07E-40 T 12-10-2018 IPR011032 GroES-like superfamily N288_17275 9e32335438d06aae7ff832b46f0604fd 270 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 4 244 5.6E-37 T 12-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 N288_17275 9e32335438d06aae7ff832b46f0604fd 270 SUPERFAMILY SSF89550 16 261 1.44E-37 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 N288_17275 9e32335438d06aae7ff832b46f0604fd 270 Gene3D G3DSA:3.20.20.140 2 270 1.7E-64 T 12-10-2018 N288_14775 76c78974717a83954453c732f499744c 367 Pfam PF04443 Acyl-protein synthetase, LuxE 22 360 1.8E-24 T 12-10-2018 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723 N288_14775 76c78974717a83954453c732f499744c 367 Gene3D G3DSA:3.40.50.12780 25 348 4.5E-9 T 12-10-2018 N288_14775 76c78974717a83954453c732f499744c 367 SUPERFAMILY SSF56801 236 347 6.54E-5 T 12-10-2018 N288_09345 c2138e69461e7f93d30528e727930411 259 Gene3D G3DSA:2.10.240.10 216 259 5.4E-18 T 12-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily N288_09345 c2138e69461e7f93d30528e727930411 259 SUPERFAMILY SSF52343 95 258 1.57E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain N288_09345 c2138e69461e7f93d30528e727930411 259 PIRSF PIRSF006816 1 259 4.8E-67 T 12-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 N288_09345 c2138e69461e7f93d30528e727930411 259 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 216 257 2.4E-17 T 12-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain N288_09345 c2138e69461e7f93d30528e727930411 259 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 4 259 37.547 T 12-10-2018 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit N288_09345 c2138e69461e7f93d30528e727930411 259 PRINTS PR00409 Phthalate dioxygenase reductase family signature 189 197 1.3E-5 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 N288_09345 c2138e69461e7f93d30528e727930411 259 PRINTS PR00409 Phthalate dioxygenase reductase family signature 112 131 1.3E-5 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 N288_09345 c2138e69461e7f93d30528e727930411 259 Gene3D G3DSA:3.40.50.80 105 215 4.2E-24 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain N288_09345 c2138e69461e7f93d30528e727930411 259 SUPERFAMILY SSF63380 2 100 1.0E-20 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel N288_09345 c2138e69461e7f93d30528e727930411 259 Pfam PF00175 Oxidoreductase NAD-binding domain 113 202 2.1E-4 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 N288_09345 c2138e69461e7f93d30528e727930411 259 Gene3D G3DSA:2.40.30.10 2 98 2.0E-28 T 12-10-2018 N288_16695 c7eeb8f458feecc26fb3b759f41a146f 160 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 85 156 2.9E-10 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_16695 c7eeb8f458feecc26fb3b759f41a146f 160 SUPERFAMILY SSF49503 30 157 1.1E-25 T 12-10-2018 IPR008972 Cupredoxin N288_16695 c7eeb8f458feecc26fb3b759f41a146f 160 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 102 150 - T 12-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_16695 c7eeb8f458feecc26fb3b759f41a146f 160 Gene3D G3DSA:2.60.40.420 25 156 1.9E-30 T 12-10-2018 IPR008972 Cupredoxin N288_15225 810444c8e9bfc9d00e08936647e90d54 153 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 143 3.1E-18 T 12-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like N288_15225 810444c8e9bfc9d00e08936647e90d54 153 SUPERFAMILY SSF55961 3 146 8.68E-27 T 12-10-2018 N288_15225 810444c8e9bfc9d00e08936647e90d54 153 Gene3D G3DSA:3.30.530.20 2 151 9.1E-27 T 12-10-2018 IPR023393 START-like domain superfamily N288_09440 097a6e644c79f5801e0cb0531d6eb5c4 293 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 2 290 39.342 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 N288_09440 097a6e644c79f5801e0cb0531d6eb5c4 293 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 39 282 6.8E-89 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 N288_09440 097a6e644c79f5801e0cb0531d6eb5c4 293 Pfam PF03193 RsgA GTPase 59 225 1.1E-61 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 N288_09440 097a6e644c79f5801e0cb0531d6eb5c4 293 SUPERFAMILY SSF52540 64 290 1.91E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_09440 097a6e644c79f5801e0cb0531d6eb5c4 293 Gene3D G3DSA:2.40.50.140 1 61 1.8E-26 T 12-10-2018 N288_09440 097a6e644c79f5801e0cb0531d6eb5c4 293 Gene3D G3DSA:3.40.50.300 62 225 3.2E-48 T 12-10-2018 N288_09440 097a6e644c79f5801e0cb0531d6eb5c4 293 SUPERFAMILY SSF50249 1 63 8.14E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_09440 097a6e644c79f5801e0cb0531d6eb5c4 293 Pfam PF16745 RsgA N-terminal domain 3 56 5.1E-25 T 12-10-2018 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal N288_09440 097a6e644c79f5801e0cb0531d6eb5c4 293 Gene3D G3DSA:1.10.40.50 226 293 2.3E-24 T 12-10-2018 N288_12850 2145bd23ab29849b18066e26b2445617 171 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 36 7.5E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_12850 2145bd23ab29849b18066e26b2445617 171 ProSitePatterns PS01081 TetR-type HTH domain signature. 4 35 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site N288_12850 2145bd23ab29849b18066e26b2445617 171 SUPERFAMILY SSF46689 2 63 1.25E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_12850 2145bd23ab29849b18066e26b2445617 171 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 60 170 2.4E-24 T 12-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal N288_12850 2145bd23ab29849b18066e26b2445617 171 Gene3D G3DSA:1.10.357.10 1 171 3.5E-43 T 12-10-2018 N288_12850 2145bd23ab29849b18066e26b2445617 171 SUPERFAMILY SSF48498 57 170 5.93E-27 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily N288_15440 68d56c74afcc4e97d6c84d7827d2d541 376 Gene3D G3DSA:3.20.20.140 55 339 5.7E-126 T 12-10-2018 N288_15440 68d56c74afcc4e97d6c84d7827d2d541 376 SUPERFAMILY SSF51556 54 343 3.72E-50 T 12-10-2018 IPR032466 Metal-dependent hydrolase N288_15440 68d56c74afcc4e97d6c84d7827d2d541 376 Gene3D G3DSA:2.30.40.10 4 373 5.7E-126 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_15440 68d56c74afcc4e97d6c84d7827d2d541 376 Pfam PF01979 Amidohydrolase family 51 375 1.5E-25 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 N288_15440 68d56c74afcc4e97d6c84d7827d2d541 376 SUPERFAMILY SSF51338 2 376 1.09E-24 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_19030 32c2e65b5cdd28e73fdef73d356fd7c3 226 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 106 206 3.5E-31 T 12-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 N288_19030 32c2e65b5cdd28e73fdef73d356fd7c3 226 Gene3D G3DSA:3.30.160.540 5 85 1.3E-28 T 12-10-2018 N288_19030 32c2e65b5cdd28e73fdef73d356fd7c3 226 SUPERFAMILY SSF63848 104 206 8.89E-30 T 12-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 N288_19030 32c2e65b5cdd28e73fdef73d356fd7c3 226 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 7 205 2.2E-39 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 N288_19030 32c2e65b5cdd28e73fdef73d356fd7c3 226 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 6 210 21.663 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 N288_19030 32c2e65b5cdd28e73fdef73d356fd7c3 226 Gene3D G3DSA:2.160.20.70 99 223 4.4E-36 T 12-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 N288_16355 15f08be23606f847b1fa7a5bf3bbbcb6 234 SUPERFAMILY SSF55486 28 232 2.86E-36 T 12-10-2018 N288_16355 15f08be23606f847b1fa7a5bf3bbbcb6 234 Gene3D G3DSA:3.40.390.10 129 233 1.1E-13 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 N288_16980 7104d3c6494ab399b3ae9854a1db8d11 183 Pfam PF08858 IDEAL domain 140 176 6.8E-15 T 12-10-2018 IPR014957 IDEAL domain N288_16980 7104d3c6494ab399b3ae9854a1db8d11 183 Gene3D G3DSA:1.20.1440.290 1 124 3.3E-56 T 12-10-2018 IPR038091 UPF0302, N-terminal domain superfamily N288_16980 7104d3c6494ab399b3ae9854a1db8d11 183 SMART SM00914 140 176 1.5E-12 T 12-10-2018 IPR014957 IDEAL domain N288_16980 7104d3c6494ab399b3ae9854a1db8d11 183 Pfam PF08864 UPF0302 domain 10 113 6.3E-48 T 12-10-2018 IPR014963 Uncharacterised domain UPF0302, N-terminal N288_16980 7104d3c6494ab399b3ae9854a1db8d11 183 Gene3D G3DSA:4.10.810.10 125 182 7.0E-20 T 12-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 N288_16980 7104d3c6494ab399b3ae9854a1db8d11 183 Hamap MF_00760 UPF0302 protein . 3 179 32.42 T 12-10-2018 IPR011188 Uncharacterised protein family UPF0302 N288_16980 7104d3c6494ab399b3ae9854a1db8d11 183 PIRSF PIRSF007165 2 183 1.1E-79 T 12-10-2018 IPR011188 Uncharacterised protein family UPF0302 N288_04730 655d8aee3f1bfc2bc5d98b4d68b65a5d 536 Gene3D G3DSA:3.20.20.70 125 522 2.5E-98 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_04730 655d8aee3f1bfc2bc5d98b4d68b65a5d 536 Pfam PF01645 Conserved region in glutamate synthase 118 494 3.2E-104 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 N288_04730 655d8aee3f1bfc2bc5d98b4d68b65a5d 536 PIRSF PIRSF500060 6 536 2.4E-210 T 12-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria N288_04730 655d8aee3f1bfc2bc5d98b4d68b65a5d 536 SUPERFAMILY SSF51395 23 523 7.33E-108 T 12-10-2018 N288_04730 655d8aee3f1bfc2bc5d98b4d68b65a5d 536 PIRSF PIRSF006429 1 536 3.8E-159 T 12-10-2018 IPR024188 Glutamate synthase large subunit-like protein N288_25295 b9d97ffec21ef26065e0ac1cd60cfebf 202 SUPERFAMILY SSF50475 3 197 1.32E-47 T 12-10-2018 N288_25295 b9d97ffec21ef26065e0ac1cd60cfebf 202 Gene3D G3DSA:2.30.110.10 1 202 1.0E-68 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 N288_25295 b9d97ffec21ef26065e0ac1cd60cfebf 202 SMART SM00903 20 175 3.3E-22 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 N288_25295 b9d97ffec21ef26065e0ac1cd60cfebf 202 Pfam PF01613 Flavin reductase like domain 23 168 1.6E-24 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 N288_17790 0bda647e636c0d23c1e346ee6d456264 563 SUPERFAMILY SSF52540 2 516 6.84E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_17790 0bda647e636c0d23c1e346ee6d456264 563 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 555 9.2E-199 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 N288_17790 0bda647e636c0d23c1e346ee6d456264 563 PIRSF PIRSF003128 1 560 3.1E-194 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 N288_17790 0bda647e636c0d23c1e346ee6d456264 563 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 510 1.0E-17 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal N288_17790 0bda647e636c0d23c1e346ee6d456264 563 Gene3D G3DSA:3.40.50.300 1 269 2.3E-52 T 12-10-2018 N288_17790 0bda647e636c0d23c1e346ee6d456264 563 Gene3D G3DSA:3.40.50.300 270 556 1.1E-57 T 12-10-2018 N288_23735 7190339614fe002bd39a21c473d52b75 73 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 12 64 1.1E-15 T 12-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter N288_07030 ca35aa6551d6d739ddb5aa250f9a37fe 330 Gene3D G3DSA:3.30.390.50 244 330 2.7E-32 T 12-10-2018 N288_07030 ca35aa6551d6d739ddb5aa250f9a37fe 330 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 2 324 4.0E-131 T 12-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 N288_07030 ca35aa6551d6d739ddb5aa250f9a37fe 330 SUPERFAMILY SSF82649 244 329 4.71E-28 T 12-10-2018 N288_07030 ca35aa6551d6d739ddb5aa250f9a37fe 330 Pfam PF03099 Biotin/lipoate A/B protein ligase family 49 152 1.5E-11 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 N288_07030 ca35aa6551d6d739ddb5aa250f9a37fe 330 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 245 328 1.6E-31 T 12-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 N288_07030 ca35aa6551d6d739ddb5aa250f9a37fe 330 Gene3D G3DSA:3.30.930.10 3 243 6.3E-81 T 12-10-2018 N288_07030 ca35aa6551d6d739ddb5aa250f9a37fe 330 SUPERFAMILY SSF55681 2 242 1.63E-81 T 12-10-2018 N288_15395 e0181c8ed4e76cc40cd31dec4455f8c6 155 Pfam PF13038 Domain of unknown function (DUF3899) 63 152 1.4E-16 T 12-10-2018 IPR025007 Domain of unknown function DUF3899 N288_25615 d20a20892d05253c15d6fe67592c66f0 334 Pfam PF11553 Protein of unknown function (DUF3231) 170 328 5.4E-37 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_25615 d20a20892d05253c15d6fe67592c66f0 334 Pfam PF11553 Protein of unknown function (DUF3231) 2 157 9.3E-50 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_25615 d20a20892d05253c15d6fe67592c66f0 334 Gene3D G3DSA:1.20.1260.10 1 146 4.6E-11 T 12-10-2018 IPR012347 Ferritin-like N288_25615 d20a20892d05253c15d6fe67592c66f0 334 Gene3D G3DSA:1.20.1260.10 176 317 1.1E-7 T 12-10-2018 IPR012347 Ferritin-like N288_07595 1e76cffd9d31778f823f4acccf79d611 306 Gene3D G3DSA:1.10.3720.10 94 300 7.3E-16 T 12-10-2018 IPR035906 MetI-like superfamily N288_07595 1e76cffd9d31778f823f4acccf79d611 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 303 1.9E-26 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_07595 1e76cffd9d31778f823f4acccf79d611 306 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 60 1.9E-12 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain N288_07595 1e76cffd9d31778f823f4acccf79d611 306 SUPERFAMILY SSF161098 98 287 1.31E-20 T 12-10-2018 IPR035906 MetI-like superfamily N288_11660 4d525d23f499aff1f3069de155c2cb2b 123 SUPERFAMILY SSF49764 30 122 4.53E-10 T 12-10-2018 IPR008978 HSP20-like chaperone N288_11660 4d525d23f499aff1f3069de155c2cb2b 123 Gene3D G3DSA:2.60.40.790 2 123 7.0E-11 T 12-10-2018 IPR008978 HSP20-like chaperone N288_02540 bb8c4bd543b2be259eb01398069f3ea3 420 Gene3D G3DSA:1.10.630.10 2 420 1.2E-161 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 N288_02540 bb8c4bd543b2be259eb01398069f3ea3 420 Pfam PF00067 Cytochrome P450 279 398 3.4E-12 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 N288_02540 bb8c4bd543b2be259eb01398069f3ea3 420 PRINTS PR00463 E-class P450 group I signature 366 389 2.4E-7 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 N288_02540 bb8c4bd543b2be259eb01398069f3ea3 420 PRINTS PR00463 E-class P450 group I signature 280 298 2.4E-7 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 N288_02540 bb8c4bd543b2be259eb01398069f3ea3 420 PRINTS PR00463 E-class P450 group I signature 320 344 2.4E-7 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 N288_02540 bb8c4bd543b2be259eb01398069f3ea3 420 SUPERFAMILY SSF48264 13 413 7.2E-62 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 N288_22335 895a39318a250a7cda9522d00babbfc4 549 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 401 548 9.1E-53 T 12-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 N288_22335 895a39318a250a7cda9522d00babbfc4 549 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 389 405 8.8E-30 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 N288_22335 895a39318a250a7cda9522d00babbfc4 549 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 473 489 8.8E-30 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 N288_22335 895a39318a250a7cda9522d00babbfc4 549 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 353 373 8.8E-30 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 N288_22335 895a39318a250a7cda9522d00babbfc4 549 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 410 421 8.8E-30 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 N288_22335 895a39318a250a7cda9522d00babbfc4 549 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 88 137 7.3E-14 T 12-10-2018 IPR011096 FTP domain N288_22335 895a39318a250a7cda9522d00babbfc4 549 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 252 398 1.6E-51 T 12-10-2018 IPR013856 Peptidase M4 domain GO:0004222 N288_22335 895a39318a250a7cda9522d00babbfc4 549 Gene3D G3DSA:1.10.390.10 403 548 1.7E-60 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily N288_22335 895a39318a250a7cda9522d00babbfc4 549 Gene3D G3DSA:3.10.170.10 251 402 1.6E-58 T 12-10-2018 N288_22335 895a39318a250a7cda9522d00babbfc4 549 Pfam PF03413 Peptidase propeptide and YPEB domain 152 242 3.6E-6 T 12-10-2018 IPR025711 PepSY domain N288_22335 895a39318a250a7cda9522d00babbfc4 549 Gene3D G3DSA:3.10.450.490 54 248 5.8E-9 T 12-10-2018 N288_22335 895a39318a250a7cda9522d00babbfc4 549 SUPERFAMILY SSF55486 249 548 7.87E-107 T 12-10-2018 N288_11105 fb278a654fb08176eae09aa7be638806 238 Pfam PF13649 Methyltransferase domain 65 159 1.8E-19 T 12-10-2018 N288_11105 fb278a654fb08176eae09aa7be638806 238 SUPERFAMILY SSF53335 28 205 1.4E-40 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_11105 fb278a654fb08176eae09aa7be638806 238 Gene3D G3DSA:3.40.50.150 21 237 1.3E-38 T 12-10-2018 N288_03430 e13fd520ceea17e55f1c9f50c5e1147d 569 SUPERFAMILY SSF54373 399 483 1.41E-6 T 12-10-2018 N288_03430 e13fd520ceea17e55f1c9f50c5e1147d 569 SUPERFAMILY SSF51905 7 562 1.15E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_03430 e13fd520ceea17e55f1c9f50c5e1147d 569 Gene3D G3DSA:3.50.50.60 3 178 1.6E-9 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_03430 e13fd520ceea17e55f1c9f50c5e1147d 569 Gene3D G3DSA:3.50.50.60 453 565 9.1E-12 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_03430 e13fd520ceea17e55f1c9f50c5e1147d 569 Pfam PF05199 GMC oxidoreductase 427 554 1.6E-17 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 N288_03430 e13fd520ceea17e55f1c9f50c5e1147d 569 Gene3D G3DSA:3.50.50.60 234 318 1.1E-5 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_18120 4ec33b2bf1031b389dea1c89e1caccd3 321 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 7 320 1.8E-121 T 12-10-2018 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 N288_18120 4ec33b2bf1031b389dea1c89e1caccd3 321 Gene3D G3DSA:3.30.420.40 131 304 2.0E-107 T 12-10-2018 N288_18120 4ec33b2bf1031b389dea1c89e1caccd3 321 ProSitePatterns PS01125 ROK family signature. 140 167 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 N288_18120 4ec33b2bf1031b389dea1c89e1caccd3 321 Pfam PF00480 ROK family 7 320 1.1E-76 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 N288_18120 4ec33b2bf1031b389dea1c89e1caccd3 321 SUPERFAMILY SSF53067 5 318 2.99E-70 T 12-10-2018 N288_18120 4ec33b2bf1031b389dea1c89e1caccd3 321 Gene3D G3DSA:3.30.420.40 7 317 2.0E-107 T 12-10-2018 N288_20085 886d7e7c96b4e82c23bb706a458f0308 237 SUPERFAMILY SSF52540 16 217 2.61E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_20085 886d7e7c96b4e82c23bb706a458f0308 237 SMART SM00382 29 201 1.2E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_20085 886d7e7c96b4e82c23bb706a458f0308 237 ProSitePatterns PS00211 ABC transporters family signature. 126 140 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_20085 886d7e7c96b4e82c23bb706a458f0308 237 Pfam PF00005 ABC transporter 20 153 1.2E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_20085 886d7e7c96b4e82c23bb706a458f0308 237 Gene3D G3DSA:3.40.50.300 3 226 8.7E-53 T 12-10-2018 N288_08310 690a2e9c72e07e185d711699cec63707 450 Pfam PF02754 Cysteine-rich domain 330 414 7.6E-14 T 12-10-2018 IPR004017 Cysteine-rich domain N288_08310 690a2e9c72e07e185d711699cec63707 450 Pfam PF02754 Cysteine-rich domain 199 280 5.2E-20 T 12-10-2018 IPR004017 Cysteine-rich domain N288_08310 690a2e9c72e07e185d711699cec63707 450 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 78 89 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site N288_08310 690a2e9c72e07e185d711699cec63707 450 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 26 37 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site N288_08310 690a2e9c72e07e185d711699cec63707 450 SUPERFAMILY SSF46548 7 105 1.57E-19 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 N288_08310 690a2e9c72e07e185d711699cec63707 450 PIRSF PIRSF000139 6 444 3.5E-141 T 12-10-2018 N288_08310 690a2e9c72e07e185d711699cec63707 450 Gene3D G3DSA:1.10.1060.10 2 113 1.5E-7 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 N288_08310 690a2e9c72e07e185d711699cec63707 450 Pfam PF13183 4Fe-4S dicluster domain 23 92 9.9E-13 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain N288_01985 0edfed1da868ca59b9b98f34151d1b1f 309 Gene3D G3DSA:3.40.710.10 3 309 5.1E-112 T 12-10-2018 N288_01985 0edfed1da868ca59b9b98f34151d1b1f 309 Pfam PF04960 Glutaminase 23 309 1.9E-110 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 N288_01985 0edfed1da868ca59b9b98f34151d1b1f 309 SUPERFAMILY SSF56601 8 309 8.7E-111 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_01985 0edfed1da868ca59b9b98f34151d1b1f 309 Hamap MF_00313 Glutaminase [glsA]. 5 309 45.694 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 N288_01985 0edfed1da868ca59b9b98f34151d1b1f 309 TIGRFAM TIGR03814 Gln_ase: glutaminase A 9 309 5.8E-120 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 N288_16895 5b7dc99f1044356f93e00f1ae4363a33 269 PIRSF PIRSF000388 1 257 5.5E-108 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 N288_16895 5b7dc99f1044356f93e00f1ae4363a33 269 SUPERFAMILY SSF51621 1 254 3.63E-103 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 N288_16895 5b7dc99f1044356f93e00f1ae4363a33 269 Gene3D G3DSA:3.20.20.60 1 264 4.3E-114 T 12-10-2018 N288_16895 5b7dc99f1044356f93e00f1ae4363a33 269 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 254 8.0E-108 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 N288_16895 5b7dc99f1044356f93e00f1ae4363a33 269 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 1 254 41.529 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 N288_16895 5b7dc99f1044356f93e00f1ae4363a33 269 Pfam PF02548 Ketopantoate hydroxymethyltransferase 1 249 1.5E-110 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 N288_02075 59706b7d7e4d88974d2eba41419b3e07 173 Pfam PF08281 Sigma-70, region 4 108 160 6.0E-13 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_02075 59706b7d7e4d88974d2eba41419b3e07 173 SUPERFAMILY SSF88946 3 96 3.53E-23 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_02075 59706b7d7e4d88974d2eba41419b3e07 173 Gene3D G3DSA:1.10.10.10 102 170 3.5E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_02075 59706b7d7e4d88974d2eba41419b3e07 173 Gene3D G3DSA:1.10.1740.10 1 101 3.4E-23 T 12-10-2018 N288_02075 59706b7d7e4d88974d2eba41419b3e07 173 SUPERFAMILY SSF88659 103 165 2.24E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_02075 59706b7d7e4d88974d2eba41419b3e07 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 164 3.7E-23 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_02075 59706b7d7e4d88974d2eba41419b3e07 173 Pfam PF04542 Sigma-70 region 2 21 88 1.9E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_01370 268371012c64a03eb76486c23cd89a74 104 Gene3D G3DSA:1.10.3730.20 1 104 5.2E-29 T 12-10-2018 N288_01370 268371012c64a03eb76486c23cd89a74 104 SUPERFAMILY SSF103481 4 101 1.96E-19 T 12-10-2018 N288_01370 268371012c64a03eb76486c23cd89a74 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.7E-24 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 N288_20635 15bf441c14a6623e42392768eca65c27 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.7E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20635 15bf441c14a6623e42392768eca65c27 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.7E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20635 15bf441c14a6623e42392768eca65c27 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.7E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20635 15bf441c14a6623e42392768eca65c27 262 SUPERFAMILY SSF51735 7 258 2.4E-74 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_20635 15bf441c14a6623e42392768eca65c27 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 257 2.5E-59 T 12-10-2018 N288_20635 15bf441c14a6623e42392768eca65c27 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 4.9E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20635 15bf441c14a6623e42392768eca65c27 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 4.9E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20635 15bf441c14a6623e42392768eca65c27 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.9E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20635 15bf441c14a6623e42392768eca65c27 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 4.9E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20635 15bf441c14a6623e42392768eca65c27 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.9E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20635 15bf441c14a6623e42392768eca65c27 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 4.9E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20635 15bf441c14a6623e42392768eca65c27 262 Gene3D G3DSA:3.40.50.720 1 260 2.2E-77 T 12-10-2018 N288_06225 f4dc713009aa1648f472a104277c4d27 623 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 363 490 3.7E-22 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_06225 f4dc713009aa1648f472a104277c4d27 623 SUPERFAMILY SSF55957 485 615 9.16E-16 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_06225 f4dc713009aa1648f472a104277c4d27 623 SUPERFAMILY SSF53738 249 351 2.0E-15 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_06225 f4dc713009aa1648f472a104277c4d27 623 SUPERFAMILY SSF53738 72 275 3.83E-47 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_06225 f4dc713009aa1648f472a104277c4d27 623 Gene3D G3DSA:3.30.310.50 527 611 1.6E-9 T 12-10-2018 N288_06225 f4dc713009aa1648f472a104277c4d27 623 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 81 221 2.8E-40 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_06225 f4dc713009aa1648f472a104277c4d27 623 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 179 188 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_06225 f4dc713009aa1648f472a104277c4d27 623 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 545 590 1.2E-10 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_06225 f4dc713009aa1648f472a104277c4d27 623 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 178 192 5.7E-10 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_06225 f4dc713009aa1648f472a104277c4d27 623 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 335 350 5.7E-10 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_06225 f4dc713009aa1648f472a104277c4d27 623 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 268 287 5.7E-10 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_06225 f4dc713009aa1648f472a104277c4d27 623 Gene3D G3DSA:3.40.120.10 364 491 2.1E-37 T 12-10-2018 N288_06225 f4dc713009aa1648f472a104277c4d27 623 SUPERFAMILY SSF53738 343 493 3.88E-32 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_06225 f4dc713009aa1648f472a104277c4d27 623 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 249 357 3.9E-24 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 N288_06225 f4dc713009aa1648f472a104277c4d27 623 Gene3D G3DSA:3.40.120.10 72 228 1.5E-46 T 12-10-2018 N288_06225 f4dc713009aa1648f472a104277c4d27 623 Gene3D G3DSA:3.40.120.10 248 363 2.5E-22 T 12-10-2018 N288_05615 fd2ccfe7e2553a9b58c956fb20530e1b 270 Pfam PF02631 RecX family 88 208 4.8E-32 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 N288_05615 fd2ccfe7e2553a9b58c956fb20530e1b 270 Pfam PF02631 RecX family 215 268 8.8E-5 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 N288_05615 fd2ccfe7e2553a9b58c956fb20530e1b 270 Gene3D G3DSA:1.10.10.2800 1 111 4.4E-36 T 12-10-2018 N288_05615 fd2ccfe7e2553a9b58c956fb20530e1b 270 Gene3D G3DSA:1.10.10.10 112 156 5.7E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_05615 fd2ccfe7e2553a9b58c956fb20530e1b 270 Gene3D G3DSA:1.10.10.10 158 219 2.6E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_05615 fd2ccfe7e2553a9b58c956fb20530e1b 270 Gene3D G3DSA:1.10.10.10 220 270 7.7E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_05615 fd2ccfe7e2553a9b58c956fb20530e1b 270 Hamap MF_01114 Regulatory protein RecX [recX]. 46 213 17.974 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 408 575 6.1E-48 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 SMART SM00287 31 93 6.7E-13 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 SMART SM00287 103 164 8.4E-9 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 SMART SM00287 325 388 3.3E-9 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 SMART SM00287 252 314 1.4E-12 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 SMART SM00287 173 235 3.6E-11 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 Pfam PF08239 Bacterial SH3 domain 182 232 1.4E-11 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 Pfam PF08239 Bacterial SH3 domain 39 88 1.6E-9 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 Pfam PF08239 Bacterial SH3 domain 261 311 9.0E-12 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 Pfam PF08239 Bacterial SH3 domain 336 383 1.4E-9 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 Pfam PF08239 Bacterial SH3 domain 111 161 2.3E-12 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 PIRSF PIRSF037846 166 274 8.6E-18 T 12-10-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 PIRSF PIRSF037846 318 579 2.4E-92 T 12-10-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 PIRSF PIRSF037846 2 178 8.8E-40 T 12-10-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 PIRSF PIRSF037846 242 328 2.7E-15 T 12-10-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 SMART SM00646 467 575 5.4E-36 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 Gene3D G3DSA:2.30.30.40 246 315 1.3E-16 T 12-10-2018 N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 Gene3D G3DSA:2.30.30.40 24 93 1.0E-13 T 12-10-2018 N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 Gene3D G3DSA:2.30.30.40 327 389 7.9E-13 T 12-10-2018 N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 Gene3D G3DSA:2.30.30.40 173 240 7.6E-16 T 12-10-2018 N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 Gene3D G3DSA:2.30.30.40 104 169 9.4E-15 T 12-10-2018 N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 Gene3D G3DSA:3.40.630.40 404 580 4.7E-56 T 12-10-2018 N288_18825 6da3a5c5acb6ff53686afba67e79c503 581 SUPERFAMILY SSF53187 405 578 1.85E-53 T 12-10-2018 N288_14085 9283b0ceddc305cbedc905b94b6d7312 159 SUPERFAMILY SSF55811 13 147 4.6E-30 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_14085 9283b0ceddc305cbedc905b94b6d7312 159 PRINTS PR00502 NUDIX hydrolase family signature 58 73 1.1E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_14085 9283b0ceddc305cbedc905b94b6d7312 159 PRINTS PR00502 NUDIX hydrolase family signature 44 58 1.1E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_14085 9283b0ceddc305cbedc905b94b6d7312 159 ProSitePatterns PS00893 Nudix box signature. 49 70 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_14085 9283b0ceddc305cbedc905b94b6d7312 159 Pfam PF00293 NUDIX domain 24 146 7.4E-20 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_14085 9283b0ceddc305cbedc905b94b6d7312 159 Gene3D G3DSA:3.90.79.10 1 147 4.7E-34 T 12-10-2018 N288_15125 ddd37cb7e02e5edbf63fa56d2bc5df29 169 Gene3D G3DSA:1.10.260.40 1 46 9.6E-6 T 12-10-2018 N288_15125 ddd37cb7e02e5edbf63fa56d2bc5df29 169 SUPERFAMILY SSF47413 1 47 1.13E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_12970 b965b138863c51bc746a35b61252fec6 320 PIRSF PIRSF006483 29 319 4.0E-96 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT N288_12970 b965b138863c51bc746a35b61252fec6 320 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 257 311 4.8E-22 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 N288_12970 b965b138863c51bc746a35b61252fec6 320 Gene3D G3DSA:3.30.70.120 229 304 8.7E-24 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal N288_12970 b965b138863c51bc746a35b61252fec6 320 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 50 251 2.7E-66 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT N288_04415 06f3443339cd01b06b23773c31e7357c 283 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 279 1.9E-51 T 12-10-2018 IPR003797 DegV N288_04415 06f3443339cd01b06b23773c31e7357c 283 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 6 279 8.2E-54 T 12-10-2018 IPR003797 DegV N288_04415 06f3443339cd01b06b23773c31e7357c 283 Gene3D G3DSA:3.40.50.10170 2 152 1.4E-30 T 12-10-2018 N288_04415 06f3443339cd01b06b23773c31e7357c 283 Gene3D G3DSA:3.30.1180.10 154 282 2.3E-24 T 12-10-2018 N288_04415 06f3443339cd01b06b23773c31e7357c 283 SUPERFAMILY SSF82549 2 279 4.45E-51 T 12-10-2018 N288_17350 fe79971306e3793166dd5bb45bd9190d 162 Pfam PF13047 Protein of unknown function (DUF3907) 10 156 2.9E-66 T 12-10-2018 IPR025013 Protein of unknown function DUF3907 N288_20150 8d08d15392006a7251f9a20b74402092 454 Gene3D G3DSA:3.40.50.300 131 319 3.7E-66 T 12-10-2018 N288_20150 8d08d15392006a7251f9a20b74402092 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 453 1.7E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 N288_20150 8d08d15392006a7251f9a20b74402092 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 416 433 1.7E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 N288_20150 8d08d15392006a7251f9a20b74402092 454 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 N288_20150 8d08d15392006a7251f9a20b74402092 454 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 60 2.6E-9 T 12-10-2018 IPR000014 PAS domain N288_20150 8d08d15392006a7251f9a20b74402092 454 Gene3D G3DSA:1.10.8.60 320 398 4.5E-22 T 12-10-2018 N288_20150 8d08d15392006a7251f9a20b74402092 454 SMART SM00091 11 77 1.1E-6 T 12-10-2018 IPR000014 PAS domain N288_20150 8d08d15392006a7251f9a20b74402092 454 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 N288_20150 8d08d15392006a7251f9a20b74402092 454 SUPERFAMILY SSF52540 146 392 3.55E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_20150 8d08d15392006a7251f9a20b74402092 454 SMART SM00382 167 311 9.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_20150 8d08d15392006a7251f9a20b74402092 454 Gene3D G3DSA:1.10.10.60 401 454 3.5E-14 T 12-10-2018 N288_20150 8d08d15392006a7251f9a20b74402092 454 Pfam PF02954 Bacterial regulatory protein, Fis family 410 450 1.8E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 N288_20150 8d08d15392006a7251f9a20b74402092 454 Pfam PF00989 PAS fold 13 67 1.6E-7 T 12-10-2018 IPR013767 PAS fold GO:0006355 N288_20150 8d08d15392006a7251f9a20b74402092 454 Pfam PF00158 Sigma-54 interaction domain 147 313 3.2E-71 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 N288_20150 8d08d15392006a7251f9a20b74402092 454 Gene3D G3DSA:3.30.450.20 13 116 2.2E-13 T 12-10-2018 N288_20150 8d08d15392006a7251f9a20b74402092 454 SUPERFAMILY SSF55785 11 106 9.82E-13 T 12-10-2018 IPR035965 PAS domain superfamily N288_20150 8d08d15392006a7251f9a20b74402092 454 SUPERFAMILY SSF46689 361 452 3.7E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 Gene3D G3DSA:1.10.288.10 897 955 4.1E-62 T 12-10-2018 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 SUPERFAMILY SSF56507 872 1146 5.36E-86 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 Pfam PF02310 B12 binding domain 713 803 3.8E-19 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 Gene3D G3DSA:3.40.50.280 709 853 7.2E-46 T 12-10-2018 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 TIGRFAM TIGR02082 metH: methionine synthase 11 1146 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 Gene3D G3DSA:3.20.20.330 3 320 3.8E-108 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 SUPERFAMILY SSF51717 337 600 3.01E-80 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 Pfam PF02607 B12 binding domain 627 700 3.6E-22 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 SUPERFAMILY SSF82282 5 379 7.06E-112 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 Pfam PF00809 Pterin binding enzyme 340 573 1.0E-40 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 Pfam PF02574 Homocysteine S-methyltransferase 15 304 4.4E-75 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 899 1147 4.8E-54 T 12-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 SUPERFAMILY SSF47644 620 706 2.88E-24 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 Gene3D G3DSA:3.20.20.20 321 616 5.3E-101 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 Gene3D G3DSA:3.10.196.10 883 1146 4.1E-62 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 PIRSF PIRSF000381 1 1148 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 SMART SM01018 624 707 1.1E-35 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 SUPERFAMILY SSF52242 708 850 7.33E-41 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 N288_12480 3442fccb314133166fe0ee0cdd99bc5f 1149 Gene3D G3DSA:1.10.1240.10 617 704 7.5E-27 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_22395 3f8beb18d8a78c842c64384859b70e6b 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 12-10-2018 N288_22395 3f8beb18d8a78c842c64384859b70e6b 340 SUPERFAMILY SSF47413 2 61 1.93E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_22395 3f8beb18d8a78c842c64384859b70e6b 340 Gene3D G3DSA:3.40.50.2300 160 290 9.0E-80 T 12-10-2018 N288_22395 3f8beb18d8a78c842c64384859b70e6b 340 Gene3D G3DSA:3.40.50.2300 63 307 9.0E-80 T 12-10-2018 N288_22395 3f8beb18d8a78c842c64384859b70e6b 340 SUPERFAMILY SSF53822 62 332 4.38E-75 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_22395 3f8beb18d8a78c842c64384859b70e6b 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 3.6E-7 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_22395 3f8beb18d8a78c842c64384859b70e6b 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 3.6E-7 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_22395 3f8beb18d8a78c842c64384859b70e6b 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.2E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_22395 3f8beb18d8a78c842c64384859b70e6b 340 Gene3D G3DSA:1.10.260.40 1 60 9.7E-23 T 12-10-2018 N288_22395 3f8beb18d8a78c842c64384859b70e6b 340 SMART SM00354 2 72 1.2E-31 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_22395 3f8beb18d8a78c842c64384859b70e6b 340 Pfam PF13377 Periplasmic binding protein-like domain 168 330 8.8E-42 T 12-10-2018 N288_06765 1ccd1e153b6d672c837c008b01724c26 406 SUPERFAMILY SSF56300 4 278 6.77E-52 T 12-10-2018 N288_06765 1ccd1e153b6d672c837c008b01724c26 406 Gene3D G3DSA:3.60.21.10 2 249 1.4E-57 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_06765 1ccd1e153b6d672c837c008b01724c26 406 PIRSF PIRSF033091 1 406 1.1E-128 T 12-10-2018 IPR014576 Predicted phosphoesterase, YhaO type N288_06765 1ccd1e153b6d672c837c008b01724c26 406 Pfam PF00149 Calcineurin-like phosphoesterase 5 201 3.8E-15 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 N288_04340 d2d04f5bfbfabe79110ebd1aba37377b 318 Pfam PF01032 FecCD transport family 11 311 1.2E-67 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 N288_04340 d2d04f5bfbfabe79110ebd1aba37377b 318 Gene3D G3DSA:1.10.3470.10 1 313 4.7E-65 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_04340 d2d04f5bfbfabe79110ebd1aba37377b 318 SUPERFAMILY SSF81345 2 311 8.63E-69 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_22585 34df3e8b741c96ff77497619ded7e252 531 Gene3D G3DSA:3.40.190.10 173 408 9.6E-41 T 12-10-2018 N288_22585 34df3e8b741c96ff77497619ded7e252 531 Gene3D G3DSA:3.40.190.10 46 172 5.3E-20 T 12-10-2018 N288_22585 34df3e8b741c96ff77497619ded7e252 531 Pfam PF13416 Bacterial extracellular solute-binding protein 74 335 6.1E-19 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein N288_22585 34df3e8b741c96ff77497619ded7e252 531 SUPERFAMILY SSF53850 21 521 1.15E-77 T 12-10-2018 N288_25150 a7a13f0e48621235826200e355e23304 113 PIRSF PIRSF029876 2 113 9.1E-44 T 12-10-2018 IPR008316 Uncharacterised conserved protein UCP029876 N288_25150 a7a13f0e48621235826200e355e23304 113 SUPERFAMILY SSF158560 1 110 2.75E-37 T 12-10-2018 N288_25150 a7a13f0e48621235826200e355e23304 113 Pfam PF06304 Protein of unknown function (DUF1048) 10 110 6.9E-42 T 12-10-2018 IPR008316 Uncharacterised conserved protein UCP029876 N288_25150 a7a13f0e48621235826200e355e23304 113 Gene3D G3DSA:1.10.1900.10 1 113 1.1E-46 T 12-10-2018 N288_23795 1bbb54de5df58696f98452bde5f9cb96 430 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 231 382 1.2E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_23795 1bbb54de5df58696f98452bde5f9cb96 430 SUPERFAMILY SSF58104 101 428 2.22E-63 T 12-10-2018 N288_23795 1bbb54de5df58696f98452bde5f9cb96 430 Gene3D G3DSA:1.10.287.950 72 430 2.0E-60 T 12-10-2018 N288_23795 1bbb54de5df58696f98452bde5f9cb96 430 SMART SM00283 147 429 1.0E-51 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_23795 1bbb54de5df58696f98452bde5f9cb96 430 Pfam PF00672 HAMP domain 74 122 3.8E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_23795 1bbb54de5df58696f98452bde5f9cb96 430 SMART SM00304 304 360 100.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_23795 1bbb54de5df58696f98452bde5f9cb96 430 SMART SM00304 72 125 5.9E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_17120 663445afd768a1003819301cd3029d31 351 SUPERFAMILY SSF51395 22 346 1.69E-87 T 12-10-2018 N288_17120 663445afd768a1003819301cd3029d31 351 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 254 274 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 N288_17120 663445afd768a1003819301cd3029d31 351 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 3 330 38.099 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 N288_17120 663445afd768a1003819301cd3029d31 351 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 5 329 4.0E-117 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 N288_17120 663445afd768a1003819301cd3029d31 351 SMART SM01240 22 333 2.3E-4 T 12-10-2018 N288_17120 663445afd768a1003819301cd3029d31 351 PIRSF PIRSF003314 1 340 4.0E-122 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 N288_17120 663445afd768a1003819301cd3029d31 351 Pfam PF01070 FMN-dependent dehydrogenase 166 324 3.2E-15 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 N288_17120 663445afd768a1003819301cd3029d31 351 Gene3D G3DSA:3.20.20.70 2 351 8.3E-127 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_20710 8b5e36620956344dfc69e9cab6ce1891 276 Gene3D G3DSA:3.40.50.1820 1 275 4.4E-69 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_20710 8b5e36620956344dfc69e9cab6ce1891 276 PRINTS PR00412 Epoxide hydrolase signature 112 125 7.9E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 N288_20710 8b5e36620956344dfc69e9cab6ce1891 276 PRINTS PR00412 Epoxide hydrolase signature 98 111 7.9E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 N288_20710 8b5e36620956344dfc69e9cab6ce1891 276 PRINTS PR00412 Epoxide hydrolase signature 249 271 7.9E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 N288_20710 8b5e36620956344dfc69e9cab6ce1891 276 PRINTS PR00412 Epoxide hydrolase signature 34 52 7.9E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 N288_20710 8b5e36620956344dfc69e9cab6ce1891 276 Pfam PF00561 alpha/beta hydrolase fold 200 260 3.7E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_20710 8b5e36620956344dfc69e9cab6ce1891 276 Pfam PF00561 alpha/beta hydrolase fold 29 146 4.7E-22 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_20710 8b5e36620956344dfc69e9cab6ce1891 276 SUPERFAMILY SSF53474 3 272 1.71E-65 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_20710 8b5e36620956344dfc69e9cab6ce1891 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 218 232 1.2E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_20710 8b5e36620956344dfc69e9cab6ce1891 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 1.2E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_20710 8b5e36620956344dfc69e9cab6ce1891 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 53 68 1.2E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_20710 8b5e36620956344dfc69e9cab6ce1891 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 1.2E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_13340 18e517657a721ad7822850c647cdeb2f 166 Gene3D G3DSA:3.40.630.30 6 166 4.3E-44 T 12-10-2018 N288_13340 18e517657a721ad7822850c647cdeb2f 166 SUPERFAMILY SSF55729 6 165 7.98E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_13340 18e517657a721ad7822850c647cdeb2f 166 Pfam PF00583 Acetyltransferase (GNAT) family 49 138 2.0E-13 T 12-10-2018 IPR000182 GNAT domain N288_11955 adec00e6e1deecabdcbd362ca019188d 484 Gene3D G3DSA:1.10.4160.10 1 466 4.6E-103 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily N288_11955 adec00e6e1deecabdcbd362ca019188d 484 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 13 438 1.4E-52 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 N288_18795 ba1f6e90f10bb53cbe229bdf19a9fb4a 423 SUPERFAMILY SSF48019 239 421 1.13E-71 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 N288_18795 ba1f6e90f10bb53cbe229bdf19a9fb4a 423 SUPERFAMILY SSF52540 3 220 1.46E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_18795 ba1f6e90f10bb53cbe229bdf19a9fb4a 423 Gene3D G3DSA:1.20.272.10 229 332 5.3E-40 T 12-10-2018 N288_18795 ba1f6e90f10bb53cbe229bdf19a9fb4a 423 Pfam PF16193 AAA C-terminal domain 173 253 2.8E-25 T 12-10-2018 IPR032423 AAA C-terminal domain N288_18795 ba1f6e90f10bb53cbe229bdf19a9fb4a 423 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 9 125 1.2E-16 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 N288_18795 ba1f6e90f10bb53cbe229bdf19a9fb4a 423 Gene3D G3DSA:1.10.8.60 151 225 1.3E-22 T 12-10-2018 N288_18795 ba1f6e90f10bb53cbe229bdf19a9fb4a 423 SMART SM00382 39 151 1.3E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_18795 ba1f6e90f10bb53cbe229bdf19a9fb4a 423 Pfam PF12002 MgsA AAA+ ATPase C terminal 254 419 1.4E-66 T 12-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal N288_18795 ba1f6e90f10bb53cbe229bdf19a9fb4a 423 Gene3D G3DSA:1.10.3710.10 333 423 5.0E-27 T 12-10-2018 N288_18795 ba1f6e90f10bb53cbe229bdf19a9fb4a 423 Gene3D G3DSA:3.40.50.300 1 150 3.8E-41 T 12-10-2018 N288_18105 4fc4f17c8773bf6688dc474996fe4854 395 Gene3D G3DSA:3.40.630.10 108 395 3.1E-50 T 12-10-2018 N288_18105 4fc4f17c8773bf6688dc474996fe4854 395 SMART SM00257 52 96 1.7E-9 T 12-10-2018 IPR018392 LysM domain N288_18105 4fc4f17c8773bf6688dc474996fe4854 395 SMART SM00257 2 46 5.1E-6 T 12-10-2018 IPR018392 LysM domain N288_18105 4fc4f17c8773bf6688dc474996fe4854 395 Gene3D G3DSA:3.10.350.10 1 46 4.0E-9 T 12-10-2018 IPR036779 LysM domain superfamily N288_18105 4fc4f17c8773bf6688dc474996fe4854 395 Gene3D G3DSA:3.10.350.10 51 96 3.1E-12 T 12-10-2018 IPR036779 LysM domain superfamily N288_18105 4fc4f17c8773bf6688dc474996fe4854 395 SMART SM00631 110 384 2.2E-24 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 N288_18105 4fc4f17c8773bf6688dc474996fe4854 395 SUPERFAMILY SSF54106 51 97 1.83E-7 T 12-10-2018 N288_18105 4fc4f17c8773bf6688dc474996fe4854 395 Pfam PF00246 Zinc carboxypeptidase 118 385 2.0E-25 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 N288_18105 4fc4f17c8773bf6688dc474996fe4854 395 SUPERFAMILY SSF53187 109 392 8.27E-52 T 12-10-2018 N288_18105 4fc4f17c8773bf6688dc474996fe4854 395 Pfam PF01476 LysM domain 5 46 9.0E-4 T 12-10-2018 IPR018392 LysM domain N288_18105 4fc4f17c8773bf6688dc474996fe4854 395 Pfam PF01476 LysM domain 53 96 8.8E-8 T 12-10-2018 IPR018392 LysM domain N288_16525 569f2716e45886a15f867ed40cdc8276 729 SMART SM00436 130 225 1.0E-34 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 N288_16525 569f2716e45886a15f867ed40cdc8276 729 Pfam PF13342 C-terminal repeat of topoisomerase 666 723 1.8E-17 T 12-10-2018 IPR025589 Topoisomerase C-terminal repeat N288_16525 569f2716e45886a15f867ed40cdc8276 729 Gene3D G3DSA:1.10.460.10 164 599 5.6E-150 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 N288_16525 569f2716e45886a15f867ed40cdc8276 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 3.5E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 N288_16525 569f2716e45886a15f867ed40cdc8276 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 104 117 3.5E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 N288_16525 569f2716e45886a15f867ed40cdc8276 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 315 324 3.5E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 N288_16525 569f2716e45886a15f867ed40cdc8276 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 519 533 3.5E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 N288_16525 569f2716e45886a15f867ed40cdc8276 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 195 213 3.5E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 N288_16525 569f2716e45886a15f867ed40cdc8276 729 Gene3D G3DSA:1.10.290.10 282 411 5.6E-150 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 N288_16525 569f2716e45886a15f867ed40cdc8276 729 SMART SM00493 1 130 8.9E-9 T 12-10-2018 IPR006171 TOPRIM domain N288_16525 569f2716e45886a15f867ed40cdc8276 729 SUPERFAMILY SSF56712 1 606 3.66E-172 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain N288_16525 569f2716e45886a15f867ed40cdc8276 729 Gene3D G3DSA:2.70.20.10 219 486 5.6E-150 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 N288_16525 569f2716e45886a15f867ed40cdc8276 729 SMART SM00437 273 556 1.5E-73 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 N288_16525 569f2716e45886a15f867ed40cdc8276 729 Pfam PF01131 DNA topoisomerase 157 592 3.0E-119 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 N288_16525 569f2716e45886a15f867ed40cdc8276 729 Gene3D G3DSA:3.40.50.140 1 157 1.0E-49 T 12-10-2018 N288_16525 569f2716e45886a15f867ed40cdc8276 729 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 708 4.3E-192 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 N288_16525 569f2716e45886a15f867ed40cdc8276 729 Pfam PF01751 Toprim domain 3 138 1.7E-11 T 12-10-2018 IPR006171 TOPRIM domain N288_05110 7537bc3551ba57929ffb0f254bb21bc8 1109 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 688 958 4.5E-13 T 12-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain N288_05110 7537bc3551ba57929ffb0f254bb21bc8 1109 Gene3D G3DSA:2.70.98.40 26 270 3.2E-7 T 12-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily N288_05110 7537bc3551ba57929ffb0f254bb21bc8 1109 Gene3D G3DSA:1.50.10.10 598 1020 5.1E-87 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 N288_05110 7537bc3551ba57929ffb0f254bb21bc8 1109 SUPERFAMILY SSF48208 562 1083 9.07E-46 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 N288_05110 7537bc3551ba57929ffb0f254bb21bc8 1109 Pfam PF06165 Glycosyltransferase family 36 42 233 3.1E-6 T 12-10-2018 IPR010383 Glycosyl hydrolase 94 N288_20160 0221842b00ee7a02dc61029530649809 395 Pfam PF07690 Major Facilitator Superfamily 8 225 1.8E-23 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_20160 0221842b00ee7a02dc61029530649809 395 Pfam PF07690 Major Facilitator Superfamily 229 375 1.8E-19 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_20160 0221842b00ee7a02dc61029530649809 395 PRINTS PR01988 Putative bacilysin exporter bacE signature 92 110 1.2E-5 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 N288_20160 0221842b00ee7a02dc61029530649809 395 PRINTS PR01988 Putative bacilysin exporter bacE signature 278 301 1.2E-5 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 N288_20160 0221842b00ee7a02dc61029530649809 395 PRINTS PR01988 Putative bacilysin exporter bacE signature 7 29 1.2E-5 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 N288_20160 0221842b00ee7a02dc61029530649809 395 PRINTS PR01988 Putative bacilysin exporter bacE signature 131 152 1.2E-5 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 N288_20160 0221842b00ee7a02dc61029530649809 395 Gene3D G3DSA:1.20.1250.20 1 199 6.7E-24 T 12-10-2018 N288_20160 0221842b00ee7a02dc61029530649809 395 SUPERFAMILY SSF103473 3 386 3.66E-57 T 12-10-2018 IPR036259 MFS transporter superfamily N288_20160 0221842b00ee7a02dc61029530649809 395 Gene3D G3DSA:1.20.1250.20 200 389 3.6E-25 T 12-10-2018 N288_23495 57812c945405b1475db18721a7d232f4 136 SMART SM00530 6 61 7.9E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_23495 57812c945405b1475db18721a7d232f4 136 SUPERFAMILY SSF47413 1 67 8.19E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_23495 57812c945405b1475db18721a7d232f4 136 Gene3D G3DSA:1.10.260.40 3 106 4.2E-18 T 12-10-2018 N288_23495 57812c945405b1475db18721a7d232f4 136 Pfam PF01381 Helix-turn-helix 7 61 2.7E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_21330 af5cd25fff6f44bb02330e4053839fa9 192 SUPERFAMILY SSF55729 12 183 2.24E-46 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_21330 af5cd25fff6f44bb02330e4053839fa9 192 Pfam PF13302 Acetyltransferase (GNAT) domain 19 158 4.6E-28 T 12-10-2018 IPR000182 GNAT domain N288_21330 af5cd25fff6f44bb02330e4053839fa9 192 Gene3D G3DSA:3.40.630.30 4 188 3.6E-42 T 12-10-2018 N288_04900 66bacb68c69a7142a457016b704badf3 440 Gene3D G3DSA:3.20.20.150 3 440 9.0E-186 T 12-10-2018 N288_04900 66bacb68c69a7142a457016b704badf3 440 Hamap MF_00455 Xylose isomerase [xylA]. 9 433 55.316 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 N288_04900 66bacb68c69a7142a457016b704badf3 440 PRINTS PR00688 Xylose isomerase signature 153 172 4.8E-98 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 N288_04900 66bacb68c69a7142a457016b704badf3 440 PRINTS PR00688 Xylose isomerase signature 89 111 4.8E-98 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 N288_04900 66bacb68c69a7142a457016b704badf3 440 PRINTS PR00688 Xylose isomerase signature 330 341 4.8E-98 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 N288_04900 66bacb68c69a7142a457016b704badf3 440 PRINTS PR00688 Xylose isomerase signature 297 308 4.8E-98 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 N288_04900 66bacb68c69a7142a457016b704badf3 440 PRINTS PR00688 Xylose isomerase signature 226 250 4.8E-98 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 N288_04900 66bacb68c69a7142a457016b704badf3 440 PRINTS PR00688 Xylose isomerase signature 204 223 4.8E-98 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 N288_04900 66bacb68c69a7142a457016b704badf3 440 PRINTS PR00688 Xylose isomerase signature 130 150 4.8E-98 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 N288_04900 66bacb68c69a7142a457016b704badf3 440 PRINTS PR00688 Xylose isomerase signature 268 295 4.8E-98 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 N288_04900 66bacb68c69a7142a457016b704badf3 440 PRINTS PR00688 Xylose isomerase signature 177 198 4.8E-98 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 N288_04900 66bacb68c69a7142a457016b704badf3 440 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 3 433 7.9E-220 T 12-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 N288_04900 66bacb68c69a7142a457016b704badf3 440 SUPERFAMILY SSF51658 3 436 7.0E-176 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily N288_09925 83b9314053eb4526b059e6fa4a0f43a0 156 Gene3D G3DSA:3.30.300.70 1 80 1.1E-30 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily N288_09925 83b9314053eb4526b059e6fa4a0f43a0 156 SUPERFAMILY SSF74942 84 155 2.75E-21 T 12-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily N288_09925 83b9314053eb4526b059e6fa4a0f43a0 156 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 155 25.366 T 12-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 N288_09925 83b9314053eb4526b059e6fa4a0f43a0 156 Gene3D G3DSA:2.30.30.180 87 153 4.2E-24 T 12-10-2018 N288_09925 83b9314053eb4526b059e6fa4a0f43a0 156 Pfam PF02576 RimP N-terminal domain 11 83 2.4E-28 T 12-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal N288_09925 83b9314053eb4526b059e6fa4a0f43a0 156 Pfam PF17384 RimP C-terminal SH3 domain 86 155 1.3E-20 T 12-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal N288_09925 83b9314053eb4526b059e6fa4a0f43a0 156 SUPERFAMILY SSF75420 2 83 3.27E-27 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily N288_01695 abe008d006ad30dcd9d5c6cc1aa2d343 470 Gene3D G3DSA:3.40.50.2020 270 434 8.9E-169 T 12-10-2018 N288_01695 abe008d006ad30dcd9d5c6cc1aa2d343 470 SUPERFAMILY SSF56235 12 234 1.03E-68 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_01695 abe008d006ad30dcd9d5c6cc1aa2d343 470 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 11 455 47.288 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 N288_01695 abe008d006ad30dcd9d5c6cc1aa2d343 470 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 12 456 4.6E-170 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 N288_01695 abe008d006ad30dcd9d5c6cc1aa2d343 470 Pfam PF00156 Phosphoribosyl transferase domain 270 383 6.6E-9 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 N288_01695 abe008d006ad30dcd9d5c6cc1aa2d343 470 PIRSF PIRSF000485 8 468 6.5E-185 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 N288_01695 abe008d006ad30dcd9d5c6cc1aa2d343 470 SUPERFAMILY SSF53271 246 463 3.15E-77 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like N288_01695 abe008d006ad30dcd9d5c6cc1aa2d343 470 Pfam PF13522 Glutamine amidotransferase domain 71 204 3.3E-22 T 12-10-2018 N288_01695 abe008d006ad30dcd9d5c6cc1aa2d343 470 Gene3D G3DSA:3.60.20.10 12 457 8.9E-169 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 264 322 7.9E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 SUPERFAMILY SSF55785 28 122 2.79E-19 T 12-10-2018 IPR035965 PAS domain superfamily N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 126 5.8E-19 T 12-10-2018 IPR000014 PAS domain N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 253 8.9E-23 T 12-10-2018 IPR000014 PAS domain N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 471 8.4E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 SMART SM00086 204 247 0.98 T 12-10-2018 IPR001610 PAC motif N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 SMART SM00086 78 120 1.5E-5 T 12-10-2018 IPR001610 PAC motif N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 Gene3D G3DSA:3.30.450.20 136 248 7.1E-25 T 12-10-2018 N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 SUPERFAMILY SSF47384 255 324 7.46E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 SMART SM00388 262 325 2.6E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 Gene3D G3DSA:1.10.287.130 249 323 5.2E-17 T 12-10-2018 N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 432 1.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 1.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 470 1.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 418 1.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 SUPERFAMILY SSF55785 117 244 5.86E-24 T 12-10-2018 IPR035965 PAS domain superfamily N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 SMART SM00387 367 473 6.9E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 SUPERFAMILY SSF55874 317 471 7.33E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 Gene3D G3DSA:3.30.565.10 324 473 1.8E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 SMART SM00091 132 198 1.9E-10 T 12-10-2018 IPR000014 PAS domain N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 SMART SM00091 6 71 0.36 T 12-10-2018 IPR000014 PAS domain N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 Gene3D G3DSA:3.30.450.20 19 135 2.3E-21 T 12-10-2018 N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 Pfam PF08447 PAS fold 28 102 1.6E-10 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 N288_10970 2c34a0d94ff29bac6229f16f7e65d9e5 474 Pfam PF08447 PAS fold 155 227 1.6E-16 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 N288_17585 e4c17c5d0d24dd27669d076c5135a8b5 265 Pfam PF00106 short chain dehydrogenase 9 197 1.1E-54 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_17585 e4c17c5d0d24dd27669d076c5135a8b5 265 SUPERFAMILY SSF51735 4 257 7.38E-70 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_17585 e4c17c5d0d24dd27669d076c5135a8b5 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 9.6E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_17585 e4c17c5d0d24dd27669d076c5135a8b5 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 9.6E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_17585 e4c17c5d0d24dd27669d076c5135a8b5 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 9.6E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_17585 e4c17c5d0d24dd27669d076c5135a8b5 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_17585 e4c17c5d0d24dd27669d076c5135a8b5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 3.6E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_17585 e4c17c5d0d24dd27669d076c5135a8b5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.6E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_17585 e4c17c5d0d24dd27669d076c5135a8b5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.6E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_17585 e4c17c5d0d24dd27669d076c5135a8b5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.6E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_17585 e4c17c5d0d24dd27669d076c5135a8b5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.6E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_17585 e4c17c5d0d24dd27669d076c5135a8b5 265 Gene3D G3DSA:3.40.50.720 2 265 3.5E-70 T 12-10-2018 N288_17585 e4c17c5d0d24dd27669d076c5135a8b5 265 PIRSF PIRSF000126 3 265 1.0E-58 T 12-10-2018 N288_12080 27248d3457c5549224cfbe7d112ccd8a 145 SUPERFAMILY SSF50891 14 138 2.19E-46 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily N288_12080 27248d3457c5549224cfbe7d112ccd8a 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 100 112 4.8E-25 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 N288_12080 27248d3457c5549224cfbe7d112ccd8a 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 57 4.8E-25 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 N288_12080 27248d3457c5549224cfbe7d112ccd8a 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 85 100 4.8E-25 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 N288_12080 27248d3457c5549224cfbe7d112ccd8a 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 128 4.8E-25 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 N288_12080 27248d3457c5549224cfbe7d112ccd8a 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 19 34 4.8E-25 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 N288_12080 27248d3457c5549224cfbe7d112ccd8a 145 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 40 57 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 N288_12080 27248d3457c5549224cfbe7d112ccd8a 145 Gene3D G3DSA:2.40.100.10 1 145 7.5E-60 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily N288_12080 27248d3457c5549224cfbe7d112ccd8a 145 PIRSF PIRSF001467 2 144 6.8E-39 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 N288_12080 27248d3457c5549224cfbe7d112ccd8a 145 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 8 138 3.4E-40 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 N288_01335 38a7324fe1392ce152226070f3b42e46 164 Gene3D G3DSA:1.10.1760.20 1 155 3.9E-13 T 12-10-2018 N288_01335 38a7324fe1392ce152226070f3b42e46 164 Pfam PF12822 ECF transporter, substrate-specific component 4 149 2.1E-9 T 12-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 N288_20685 078a004a49eda363cd1c2627a34946c3 130 SMART SM00316 6 77 4.9E-27 T 12-10-2018 IPR022967 RNA-binding domain, S1 N288_20685 078a004a49eda363cd1c2627a34946c3 130 Pfam PF00575 S1 RNA binding domain 4 77 2.9E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 N288_20685 078a004a49eda363cd1c2627a34946c3 130 SUPERFAMILY SSF50249 6 89 1.72E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_20685 078a004a49eda363cd1c2627a34946c3 130 Gene3D G3DSA:2.40.50.140 2 87 2.2E-32 T 12-10-2018 N288_08450 2cf20b6032d349d1f080f88ae9641231 146 SUPERFAMILY SSF46785 8 140 5.91E-34 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_08450 2cf20b6032d349d1f080f88ae9641231 146 SMART SM00347 29 129 1.7E-28 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_08450 2cf20b6032d349d1f080f88ae9641231 146 Gene3D G3DSA:1.10.10.10 1 143 4.1E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_08450 2cf20b6032d349d1f080f88ae9641231 146 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site N288_08450 2cf20b6032d349d1f080f88ae9641231 146 Pfam PF01047 MarR family 36 93 1.8E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_14765 a9cc71f253e14938e6176c3b40d0ec9c 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 252 3.8E-59 T 12-10-2018 N288_14765 a9cc71f253e14938e6176c3b40d0ec9c 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_14765 a9cc71f253e14938e6176c3b40d0ec9c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 6.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_14765 a9cc71f253e14938e6176c3b40d0ec9c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 6.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_14765 a9cc71f253e14938e6176c3b40d0ec9c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_14765 a9cc71f253e14938e6176c3b40d0ec9c 256 SUPERFAMILY SSF51735 4 254 1.79E-77 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_14765 a9cc71f253e14938e6176c3b40d0ec9c 256 Gene3D G3DSA:3.40.50.720 3 254 2.5E-74 T 12-10-2018 N288_14765 a9cc71f253e14938e6176c3b40d0ec9c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 5.4E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_14765 a9cc71f253e14938e6176c3b40d0ec9c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.4E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_14765 a9cc71f253e14938e6176c3b40d0ec9c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 5.4E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_14765 a9cc71f253e14938e6176c3b40d0ec9c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.4E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_14765 a9cc71f253e14938e6176c3b40d0ec9c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.4E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_14765 a9cc71f253e14938e6176c3b40d0ec9c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 5.4E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08820 28b31c0f63aea60e16b5cdec48f6ad15 288 Pfam PF01522 Polysaccharide deacetylase 96 216 1.8E-25 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 N288_08820 28b31c0f63aea60e16b5cdec48f6ad15 288 SUPERFAMILY SSF88713 94 282 1.95E-42 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 N288_08820 28b31c0f63aea60e16b5cdec48f6ad15 288 Gene3D G3DSA:3.20.20.370 44 285 1.3E-47 T 12-10-2018 N288_23695 8e7479548d5dfa2d028aff81dd418aca 473 SUPERFAMILY SSF47917 354 469 8.11E-52 T 12-10-2018 N288_23695 8e7479548d5dfa2d028aff81dd418aca 473 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 342 351 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_23695 8e7479548d5dfa2d028aff81dd418aca 473 SMART SM00382 150 335 6.3E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_23695 8e7479548d5dfa2d028aff81dd418aca 473 Gene3D G3DSA:1.10.1140.10 354 472 1.4E-55 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_23695 8e7479548d5dfa2d028aff81dd418aca 473 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 469 57.523 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 N288_23695 8e7479548d5dfa2d028aff81dd418aca 473 Gene3D G3DSA:2.40.10.170 1 82 3.3E-33 T 12-10-2018 N288_23695 8e7479548d5dfa2d028aff81dd418aca 473 SUPERFAMILY SSF50615 1 82 4.45E-28 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_23695 8e7479548d5dfa2d028aff81dd418aca 473 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 80 1.2E-24 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_23695 8e7479548d5dfa2d028aff81dd418aca 473 Gene3D G3DSA:3.40.50.300 84 352 2.0E-113 T 12-10-2018 N288_23695 8e7479548d5dfa2d028aff81dd418aca 473 SUPERFAMILY SSF52540 84 356 1.0E-88 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_23695 8e7479548d5dfa2d028aff81dd418aca 473 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 138 351 6.2E-68 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_23695 8e7479548d5dfa2d028aff81dd418aca 473 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 469 4.7E-255 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 N288_03445 03c72cde740c362228af37c2d1336f69 244 Pfam PF02535 ZIP Zinc transporter 95 237 2.0E-15 T 12-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 N288_17430 d6f1882c005d4f0fd73f1f705287b599 146 Gene3D G3DSA:3.30.565.10 1 143 5.7E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_17430 d6f1882c005d4f0fd73f1f705287b599 146 SUPERFAMILY SSF55874 28 135 1.27E-23 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_17430 d6f1882c005d4f0fd73f1f705287b599 146 Pfam PF13581 Histidine kinase-like ATPase domain 10 136 1.8E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_17430 d6f1882c005d4f0fd73f1f705287b599 146 SMART SM00387 35 140 2.3E-5 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_17430 d6f1882c005d4f0fd73f1f705287b599 146 Hamap MF_00637 Anti-sigma F factor [spoIIAB]. 1 140 36.173 T 12-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 N288_17430 d6f1882c005d4f0fd73f1f705287b599 146 TIGRFAM TIGR01925 spIIAB: anti-sigma F factor 1 137 9.2E-72 T 12-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 N288_24780 0897f01fe2e7bb50719ea80d320928b6 228 Pfam PF00072 Response regulator receiver domain 5 114 4.6E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_24780 0897f01fe2e7bb50719ea80d320928b6 228 SMART SM00862 152 228 1.3E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_24780 0897f01fe2e7bb50719ea80d320928b6 228 Gene3D G3DSA:1.10.10.10 131 228 2.2E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_24780 0897f01fe2e7bb50719ea80d320928b6 228 SMART SM00448 3 113 1.8E-46 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_24780 0897f01fe2e7bb50719ea80d320928b6 228 Gene3D G3DSA:3.40.50.2300 2 130 4.2E-43 T 12-10-2018 N288_24780 0897f01fe2e7bb50719ea80d320928b6 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 2.1E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_24780 0897f01fe2e7bb50719ea80d320928b6 228 SUPERFAMILY SSF52172 4 186 1.26E-44 T 12-10-2018 IPR011006 CheY-like superfamily N288_09220 74539c541fc01bd62f33c4e99a0ee49d 237 Gene3D G3DSA:3.30.70.1880 99 235 3.0E-31 T 12-10-2018 N288_09220 74539c541fc01bd62f33c4e99a0ee49d 237 Pfam PF05949 Bacterial protein of unknown function (DUF881) 100 232 1.7E-32 T 12-10-2018 IPR010273 Protein of unknown function DUF881 N288_02365 ab2aa933c42aa7d74a3bfc769ae78439 142 SUPERFAMILY SSF55729 2 130 7.89E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_02365 ab2aa933c42aa7d74a3bfc769ae78439 142 Pfam PF00583 Acetyltransferase (GNAT) family 38 130 2.6E-14 T 12-10-2018 IPR000182 GNAT domain N288_02365 ab2aa933c42aa7d74a3bfc769ae78439 142 Gene3D G3DSA:3.40.630.30 1 140 9.0E-28 T 12-10-2018 N288_02155 b409c34fd6b6d6aad2e3ca1a6af2f7d2 180 Gene3D G3DSA:3.40.630.30 1 153 1.7E-12 T 12-10-2018 N288_02155 b409c34fd6b6d6aad2e3ca1a6af2f7d2 180 SUPERFAMILY SSF55729 1 149 1.99E-13 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_02155 b409c34fd6b6d6aad2e3ca1a6af2f7d2 180 Pfam PF00583 Acetyltransferase (GNAT) family 51 136 1.2E-7 T 12-10-2018 IPR000182 GNAT domain N288_11125 d4f59ed57a9aa07d8c5c1459529941fe 309 SUPERFAMILY SSF56112 14 256 6.0E-36 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_11125 d4f59ed57a9aa07d8c5c1459529941fe 309 Gene3D G3DSA:3.90.1200.10 95 286 4.9E-23 T 12-10-2018 N288_11125 d4f59ed57a9aa07d8c5c1459529941fe 309 Pfam PF01636 Phosphotransferase enzyme family 21 244 3.5E-24 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase N288_09975 de571ab33fb6409c976148d0d8a98c08 706 SMART SM00322 553 618 1.3E-12 T 12-10-2018 IPR004087 K Homology domain GO:0003676 N288_09975 de571ab33fb6409c976148d0d8a98c08 706 SUPERFAMILY SSF50249 621 703 6.51E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_09975 de571ab33fb6409c976148d0d8a98c08 706 Gene3D G3DSA:2.40.50.140 623 694 3.1E-26 T 12-10-2018 N288_09975 de571ab33fb6409c976148d0d8a98c08 706 Gene3D G3DSA:3.30.230.70 1 230 6.9E-86 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 N288_09975 de571ab33fb6409c976148d0d8a98c08 706 SUPERFAMILY SSF54791 556 641 1.14E-24 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 N288_09975 de571ab33fb6409c976148d0d8a98c08 706 Pfam PF01138 3' exoribonuclease family, domain 1 15 144 8.2E-21 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 N288_09975 de571ab33fb6409c976148d0d8a98c08 706 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 5.1E-18 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 N288_09975 de571ab33fb6409c976148d0d8a98c08 706 SUPERFAMILY SSF55666 145 235 6.68E-31 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 N288_09975 de571ab33fb6409c976148d0d8a98c08 706 Pfam PF00013 KH domain 557 615 3.3E-10 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 N288_09975 de571ab33fb6409c976148d0d8a98c08 706 Pfam PF00575 S1 RNA binding domain 620 691 2.6E-19 T 12-10-2018 IPR003029 S1 domain GO:0003676 N288_09975 de571ab33fb6409c976148d0d8a98c08 706 SMART SM00316 621 691 4.9E-25 T 12-10-2018 IPR022967 RNA-binding domain, S1 N288_09975 de571ab33fb6409c976148d0d8a98c08 706 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 31.171 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 N288_09975 de571ab33fb6409c976148d0d8a98c08 706 SUPERFAMILY SSF55666 451 550 7.72E-29 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 N288_09975 de571ab33fb6409c976148d0d8a98c08 706 SUPERFAMILY SSF54211 8 144 8.1E-50 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_09975 de571ab33fb6409c976148d0d8a98c08 706 Gene3D G3DSA:3.30.230.70 235 550 6.4E-119 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 N288_09975 de571ab33fb6409c976148d0d8a98c08 706 PIRSF PIRSF005499 2 706 1.3E-302 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 N288_09975 de571ab33fb6409c976148d0d8a98c08 706 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 2.5E-16 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 N288_09975 de571ab33fb6409c976148d0d8a98c08 706 Pfam PF03725 3' exoribonuclease family, domain 2 460 529 2.4E-7 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 N288_09975 de571ab33fb6409c976148d0d8a98c08 706 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 693 0.0 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 N288_09975 de571ab33fb6409c976148d0d8a98c08 706 Gene3D G3DSA:3.30.1370.10 551 622 3.4E-21 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 N288_09975 de571ab33fb6409c976148d0d8a98c08 706 SUPERFAMILY SSF54211 292 489 1.27E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_09975 de571ab33fb6409c976148d0d8a98c08 706 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 320 7.9E-16 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 N288_10560 fba67133f7f87eb84fa5337bd1702b68 104 SUPERFAMILY SSF52794 1 101 3.14E-36 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 N288_10560 fba67133f7f87eb84fa5337bd1702b68 104 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 2 93 8.7E-33 T 12-10-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 N288_10560 fba67133f7f87eb84fa5337bd1702b68 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 93 2.7E-23 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 N288_10560 fba67133f7f87eb84fa5337bd1702b68 104 Gene3D G3DSA:3.40.50.2300 1 103 1.4E-38 T 12-10-2018 N288_23580 77868f286eeac102b044d9458bd1a0db 112 Pfam PF13937 Domain of unknown function (DUF4212) 22 97 3.6E-27 T 12-10-2018 IPR019886 Sodium symporter small subunit, predicted N288_23580 77868f286eeac102b044d9458bd1a0db 112 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 24 98 2.2E-26 T 12-10-2018 IPR019886 Sodium symporter small subunit, predicted N288_21670 c7e5f3d652183865284d9af5bcd54976 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 294 2.6E-51 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 N288_21670 c7e5f3d652183865284d9af5bcd54976 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 305 2.6E-120 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 N288_21670 c7e5f3d652183865284d9af5bcd54976 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 2.5E-71 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_21670 c7e5f3d652183865284d9af5bcd54976 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.5E-71 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_21670 c7e5f3d652183865284d9af5bcd54976 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 2.5E-71 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_21670 c7e5f3d652183865284d9af5bcd54976 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 2.5E-71 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_21670 c7e5f3d652183865284d9af5bcd54976 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 268 286 2.5E-71 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_21670 c7e5f3d652183865284d9af5bcd54976 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 195 211 2.5E-71 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_21670 c7e5f3d652183865284d9af5bcd54976 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 234 255 2.5E-71 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_21670 c7e5f3d652183865284d9af5bcd54976 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 2.5E-71 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_21670 c7e5f3d652183865284d9af5bcd54976 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 2.5E-71 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_21670 c7e5f3d652183865284d9af5bcd54976 316 Gene3D G3DSA:3.50.50.60 117 240 2.5E-115 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_21670 c7e5f3d652183865284d9af5bcd54976 316 SUPERFAMILY SSF51905 2 301 1.59E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_21670 c7e5f3d652183865284d9af5bcd54976 316 Gene3D G3DSA:3.50.50.60 8 301 2.5E-115 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_21670 c7e5f3d652183865284d9af5bcd54976 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 N288_21670 c7e5f3d652183865284d9af5bcd54976 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 2.6E-37 T 12-10-2018 N288_21670 c7e5f3d652183865284d9af5bcd54976 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.6E-37 T 12-10-2018 N288_21670 c7e5f3d652183865284d9af5bcd54976 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 2.6E-37 T 12-10-2018 N288_21670 c7e5f3d652183865284d9af5bcd54976 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.6E-37 T 12-10-2018 N288_21670 c7e5f3d652183865284d9af5bcd54976 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 2.6E-37 T 12-10-2018 N288_06040 becdca54db86a4bd8a0a23240484c60a 170 Gene3D G3DSA:3.40.630.30 1 170 1.9E-42 T 12-10-2018 N288_06040 becdca54db86a4bd8a0a23240484c60a 170 Pfam PF13527 Acetyltransferase (GNAT) domain 3 127 1.1E-9 T 12-10-2018 N288_06040 becdca54db86a4bd8a0a23240484c60a 170 SUPERFAMILY SSF55729 1 135 6.97E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_02495 4c26ff12dc74cdd8deeb5780bec0c1ac 50 Pfam PF14152 YfhE-like protein 9 43 8.1E-17 T 12-10-2018 IPR025437 YfhE-like protein N288_15145 628eaf810d76107b898504d90ad4d351 288 Gene3D G3DSA:3.10.310.10 1 122 1.0E-36 T 12-10-2018 N288_15145 628eaf810d76107b898504d90ad4d351 288 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 285 1.7E-57 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 N288_15145 628eaf810d76107b898504d90ad4d351 288 PIRSF PIRSF016184 1 288 1.6E-70 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 N288_15145 628eaf810d76107b898504d90ad4d351 288 Pfam PF02567 Phenazine biosynthesis-like protein 8 279 1.7E-57 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 N288_15145 628eaf810d76107b898504d90ad4d351 288 Gene3D G3DSA:3.10.310.10 123 277 2.3E-43 T 12-10-2018 N288_15145 628eaf810d76107b898504d90ad4d351 288 SUPERFAMILY SSF54506 1 279 2.5E-63 T 12-10-2018 N288_22195 e17fbb1665dcfe46c4cecf1887cefe66 422 Pfam PF00395 S-layer homology domain 150 190 8.1E-8 T 12-10-2018 IPR001119 S-layer homology domain N288_22195 e17fbb1665dcfe46c4cecf1887cefe66 422 Pfam PF00395 S-layer homology domain 33 74 1.6E-6 T 12-10-2018 IPR001119 S-layer homology domain N288_22195 e17fbb1665dcfe46c4cecf1887cefe66 422 Pfam PF00395 S-layer homology domain 101 133 8.2E-10 T 12-10-2018 IPR001119 S-layer homology domain N288_16380 7575465cecde512fb2ae7f5eb873e446 368 Pfam PF05816 Toxic anion resistance protein (TelA) 38 363 8.1E-108 T 12-10-2018 IPR008863 Toxic anion resistance N288_16380 7575465cecde512fb2ae7f5eb873e446 368 PIRSF PIRSF026508 3 367 1.2E-121 T 12-10-2018 IPR008863 Toxic anion resistance N288_15940 6d50438ed9e89532e48f12ce278cf0dd 216 SUPERFAMILY SSF63380 1 90 2.47E-24 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel N288_15940 6d50438ed9e89532e48f12ce278cf0dd 216 Gene3D G3DSA:2.40.30.20 1 88 2.1E-29 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_15940 6d50438ed9e89532e48f12ce278cf0dd 216 PIRSF PIRSF000498 1 210 1.2E-73 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 N288_15940 6d50438ed9e89532e48f12ce278cf0dd 216 Gene3D G3DSA:2.40.30.20 101 204 2.4E-30 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_15940 6d50438ed9e89532e48f12ce278cf0dd 216 SUPERFAMILY SSF63380 92 195 4.68E-29 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel N288_15940 6d50438ed9e89532e48f12ce278cf0dd 216 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 200 7.5E-71 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 N288_15940 6d50438ed9e89532e48f12ce278cf0dd 216 Pfam PF00677 Lumazine binding domain 99 183 1.9E-20 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 N288_15940 6d50438ed9e89532e48f12ce278cf0dd 216 Pfam PF00677 Lumazine binding domain 3 86 6.9E-22 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 N288_19445 223d37a108fa14f0c7fc9d3479214a2f 308 Hamap MF_00053 Ribonuclease HIII [rnhC]. 1 306 34.967 T 12-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 N288_19445 223d37a108fa14f0c7fc9d3479214a2f 308 Gene3D G3DSA:3.30.420.10 91 307 2.9E-79 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 N288_19445 223d37a108fa14f0c7fc9d3479214a2f 308 Pfam PF11858 Domain of unknown function (DUF3378) 3 77 4.5E-26 T 12-10-2018 IPR024568 Ribonuclease HIII, N-terminal N288_19445 223d37a108fa14f0c7fc9d3479214a2f 308 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 6 298 1.6E-95 T 12-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 N288_19445 223d37a108fa14f0c7fc9d3479214a2f 308 SUPERFAMILY SSF53098 92 302 1.24E-48 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily N288_19445 223d37a108fa14f0c7fc9d3479214a2f 308 Gene3D G3DSA:3.30.310.10 1 84 5.0E-26 T 12-10-2018 IPR012295 TBP domain superfamily N288_19445 223d37a108fa14f0c7fc9d3479214a2f 308 Pfam PF01351 Ribonuclease HII 94 299 8.6E-51 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain N288_19445 223d37a108fa14f0c7fc9d3479214a2f 308 PIRSF PIRSF037748 1 307 6.9E-134 T 12-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 N288_19965 d4c651d9c6e0cdb72faa1bf90eeaeb48 366 Gene3D G3DSA:3.90.1170.20 10 118 4.9E-17 T 12-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 N288_19965 d4c651d9c6e0cdb72faa1bf90eeaeb48 366 PIRSF PIRSF000484 15 342 9.2E-60 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 N288_19965 d4c651d9c6e0cdb72faa1bf90eeaeb48 366 SUPERFAMILY SSF51690 128 353 2.5E-47 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 N288_19965 d4c651d9c6e0cdb72faa1bf90eeaeb48 366 Gene3D G3DSA:3.20.20.70 120 333 8.6E-63 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_19965 d4c651d9c6e0cdb72faa1bf90eeaeb48 366 SUPERFAMILY SSF54675 18 128 1.96E-24 T 12-10-2018 N288_19965 d4c651d9c6e0cdb72faa1bf90eeaeb48 366 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 48 112 4.2E-7 T 12-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 N288_11840 c05764ef81a60272c4013e7939058035 586 Pfam PF01979 Amidohydrolase family 66 347 2.0E-30 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 N288_11840 c05764ef81a60272c4013e7939058035 586 TIGRFAM TIGR01178 ade: adenine deaminase 20 574 2.7E-197 T 12-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 N288_11840 c05764ef81a60272c4013e7939058035 586 Hamap MF_01518 Adenine deaminase [ade]. 20 575 39.087 T 12-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 N288_11840 c05764ef81a60272c4013e7939058035 586 Gene3D G3DSA:2.30.40.10 12 349 1.5E-132 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_11840 c05764ef81a60272c4013e7939058035 586 SUPERFAMILY SSF51338 11 353 1.16E-19 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_11840 c05764ef81a60272c4013e7939058035 586 Gene3D G3DSA:3.20.20.140 70 313 1.5E-132 T 12-10-2018 N288_11840 c05764ef81a60272c4013e7939058035 586 SUPERFAMILY SSF51556 70 318 2.72E-40 T 12-10-2018 IPR032466 Metal-dependent hydrolase N288_11840 c05764ef81a60272c4013e7939058035 586 Pfam PF13382 Adenine deaminase C-terminal domain 403 570 8.5E-61 T 12-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 N288_05270 2d2e51ea4bc47ef46ebf7cbd6c302a4c 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 2.8E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_05270 2d2e51ea4bc47ef46ebf7cbd6c302a4c 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 2.8E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_05270 2d2e51ea4bc47ef46ebf7cbd6c302a4c 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 2.8E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_05270 2d2e51ea4bc47ef46ebf7cbd6c302a4c 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 2.8E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_05270 2d2e51ea4bc47ef46ebf7cbd6c302a4c 141 Gene3D G3DSA:1.10.10.10 6 140 9.6E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_05270 2d2e51ea4bc47ef46ebf7cbd6c302a4c 141 SUPERFAMILY SSF46785 8 140 3.16E-33 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_05270 2d2e51ea4bc47ef46ebf7cbd6c302a4c 141 Pfam PF01047 MarR family 35 90 1.6E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_05270 2d2e51ea4bc47ef46ebf7cbd6c302a4c 141 SMART SM00347 26 126 3.1E-24 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_05270 2d2e51ea4bc47ef46ebf7cbd6c302a4c 141 ProSitePatterns PS01117 MarR-type HTH domain signature. 65 99 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site N288_06455 0040716125faf43abcdd946dac132751 466 SUPERFAMILY SSF55874 300 466 1.7E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_06455 0040716125faf43abcdd946dac132751 466 SMART SM00304 185 237 1.2E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_06455 0040716125faf43abcdd946dac132751 466 Gene3D G3DSA:1.20.1480.50 149 240 1.5E-13 T 12-10-2018 N288_06455 0040716125faf43abcdd946dac132751 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 9.6E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06455 0040716125faf43abcdd946dac132751 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 9.6E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06455 0040716125faf43abcdd946dac132751 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 465 9.6E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06455 0040716125faf43abcdd946dac132751 466 SMART SM00387 356 466 2.7E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_06455 0040716125faf43abcdd946dac132751 466 SUPERFAMILY SSF47384 228 312 2.94E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_06455 0040716125faf43abcdd946dac132751 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 246 310 1.0E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_06455 0040716125faf43abcdd946dac132751 466 SMART SM00388 245 311 2.4E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_06455 0040716125faf43abcdd946dac132751 466 Gene3D G3DSA:1.10.287.130 241 311 4.3E-20 T 12-10-2018 N288_06455 0040716125faf43abcdd946dac132751 466 SUPERFAMILY SSF158472 187 234 1.83E-8 T 12-10-2018 N288_06455 0040716125faf43abcdd946dac132751 466 Pfam PF00672 HAMP domain 186 233 1.7E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_06455 0040716125faf43abcdd946dac132751 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 465 8.2E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_06455 0040716125faf43abcdd946dac132751 466 Gene3D G3DSA:3.30.565.10 314 466 1.6E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_19280 b6606a7c62d01b40906c39507afdf7ec 340 SUPERFAMILY SSF48179 182 331 6.46E-71 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_19280 b6606a7c62d01b40906c39507afdf7ec 340 Gene3D G3DSA:3.40.50.720 1 180 1.1E-77 T 12-10-2018 N288_19280 b6606a7c62d01b40906c39507afdf7ec 340 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 327 43.924 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 N288_19280 b6606a7c62d01b40906c39507afdf7ec 340 SUPERFAMILY SSF51735 3 181 3.85E-70 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_19280 b6606a7c62d01b40906c39507afdf7ec 340 PIRSF PIRSF000116 201 332 1.2E-13 T 12-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 N288_19280 b6606a7c62d01b40906c39507afdf7ec 340 PIRSF PIRSF000116 1 205 1.4E-41 T 12-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 N288_19280 b6606a7c62d01b40906c39507afdf7ec 340 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 325 9.2E-141 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 N288_19280 b6606a7c62d01b40906c39507afdf7ec 340 Gene3D G3DSA:1.10.3730.40 181 336 5.1E-70 T 12-10-2018 N288_19280 b6606a7c62d01b40906c39507afdf7ec 340 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 176 1.8E-74 T 12-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 N288_19280 b6606a7c62d01b40906c39507afdf7ec 340 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 182 324 3.5E-66 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 N288_10880 0c7d6e9ccd19dd8b8258349200ac2416 66 Gene3D G3DSA:2.40.50.140 1 66 2.0E-31 T 12-10-2018 N288_10880 0c7d6e9ccd19dd8b8258349200ac2416 66 PIRSF PIRSF002599 1 66 1.5E-25 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 N288_10880 0c7d6e9ccd19dd8b8258349200ac2416 66 SUPERFAMILY SSF50249 1 65 2.62E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_10880 0c7d6e9ccd19dd8b8258349200ac2416 66 PRINTS PR00050 Cold shock protein signature 24 33 3.9E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_10880 0c7d6e9ccd19dd8b8258349200ac2416 66 PRINTS PR00050 Cold shock protein signature 39 57 3.9E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_10880 0c7d6e9ccd19dd8b8258349200ac2416 66 PRINTS PR00050 Cold shock protein signature 4 19 3.9E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_10880 0c7d6e9ccd19dd8b8258349200ac2416 66 SMART SM00357 3 66 8.3E-33 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 N288_10880 0c7d6e9ccd19dd8b8258349200ac2416 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 4.9E-32 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 N288_10880 0c7d6e9ccd19dd8b8258349200ac2416 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 12-10-2018 IPR019844 Cold-shock conserved site N288_09695 5a5d80b9296fad970af47295b63d99fa 528 PIRSF PIRSF004862 1 528 2.6E-110 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 N288_09695 5a5d80b9296fad970af47295b63d99fa 528 Gene3D G3DSA:3.30.300.30 131 219 3.2E-9 T 12-10-2018 N288_09695 5a5d80b9296fad970af47295b63d99fa 528 Pfam PF01514 Secretory protein of YscJ/FliF family 32 219 2.0E-56 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF N288_09695 5a5d80b9296fad970af47295b63d99fa 528 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 1 528 6.8E-123 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 N288_09695 5a5d80b9296fad970af47295b63d99fa 528 Pfam PF08345 Flagellar M-ring protein C-terminal 256 429 2.4E-24 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal N288_09695 5a5d80b9296fad970af47295b63d99fa 528 PRINTS PR01009 Flagellar M-ring protein signature 154 168 1.0E-20 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 N288_09695 5a5d80b9296fad970af47295b63d99fa 528 PRINTS PR01009 Flagellar M-ring protein signature 269 287 1.0E-20 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 N288_09695 5a5d80b9296fad970af47295b63d99fa 528 PRINTS PR01009 Flagellar M-ring protein signature 347 371 1.0E-20 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 N288_09695 5a5d80b9296fad970af47295b63d99fa 528 PRINTS PR01009 Flagellar M-ring protein signature 198 216 1.0E-20 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 N288_09695 5a5d80b9296fad970af47295b63d99fa 528 PRINTS PR01009 Flagellar M-ring protein signature 122 140 1.0E-20 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 N288_02500 94f26e85e3dae59bf47832121c9eb23f 140 Pfam PF08818 Domain of unknown function (DU1801) 25 129 4.6E-15 T 12-10-2018 IPR014922 Domain of unknown function DUF1801 N288_02500 94f26e85e3dae59bf47832121c9eb23f 140 SUPERFAMILY SSF159888 11 132 1.03E-7 T 12-10-2018 N288_03260 fee3b6a619b3989d7dc28aa7fbdee846 148 SUPERFAMILY SSF56112 23 110 1.82E-19 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_03260 fee3b6a619b3989d7dc28aa7fbdee846 148 Gene3D G3DSA:3.90.1200.10 2 147 1.5E-22 T 12-10-2018 N288_03260 fee3b6a619b3989d7dc28aa7fbdee846 148 Pfam PF01636 Phosphotransferase enzyme family 31 108 1.7E-16 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase N288_03510 e5e61798b685dd90a2439ffcbe199ca9 96 Pfam PF06196 Protein of unknown function (DUF997) 15 89 2.1E-29 T 12-10-2018 IPR010398 Protein of unknown function DUF997 N288_03510 e5e61798b685dd90a2439ffcbe199ca9 96 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 9 90 3.0E-21 T 12-10-2018 IPR010398 Protein of unknown function DUF997 N288_22055 26efd812700ccfcfc1730d2525b08889 160 Gene3D G3DSA:1.20.58.300 2 131 4.2E-8 T 12-10-2018 N288_22055 26efd812700ccfcfc1730d2525b08889 160 Pfam PF05130 FlgN protein 1 145 7.5E-28 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 N288_22055 26efd812700ccfcfc1730d2525b08889 160 SUPERFAMILY SSF140566 2 131 5.62E-18 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 N288_23460 db55138e66f049e1958ef9d87914a58c 1617 Pfam PF02872 5'-nucleotidase, C-terminal domain 418 616 3.1E-22 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23460 db55138e66f049e1958ef9d87914a58c 1617 Pfam PF02872 5'-nucleotidase, C-terminal domain 1032 1159 4.8E-31 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23460 db55138e66f049e1958ef9d87914a58c 1617 SUPERFAMILY SSF56300 69 427 5.06E-77 T 12-10-2018 N288_23460 db55138e66f049e1958ef9d87914a58c 1617 SUPERFAMILY SSF55816 418 655 8.11E-43 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23460 db55138e66f049e1958ef9d87914a58c 1617 Pfam PF00149 Calcineurin-like phosphoesterase 76 317 5.8E-15 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 N288_23460 db55138e66f049e1958ef9d87914a58c 1617 Pfam PF00149 Calcineurin-like phosphoesterase 715 942 2.6E-9 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 N288_23460 db55138e66f049e1958ef9d87914a58c 1617 Pfam PF00395 S-layer homology domain 1492 1535 1.7E-13 T 12-10-2018 IPR001119 S-layer homology domain N288_23460 db55138e66f049e1958ef9d87914a58c 1617 Pfam PF00395 S-layer homology domain 1432 1474 3.1E-13 T 12-10-2018 IPR001119 S-layer homology domain N288_23460 db55138e66f049e1958ef9d87914a58c 1617 Pfam PF00395 S-layer homology domain 1561 1603 2.6E-9 T 12-10-2018 IPR001119 S-layer homology domain N288_23460 db55138e66f049e1958ef9d87914a58c 1617 ProSitePatterns PS00786 5'-nucleotidase signature 2. 162 173 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23460 db55138e66f049e1958ef9d87914a58c 1617 SUPERFAMILY SSF56300 706 1011 1.9E-75 T 12-10-2018 N288_23460 db55138e66f049e1958ef9d87914a58c 1617 Gene3D G3DSA:3.60.21.10 708 1014 1.7E-80 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_23460 db55138e66f049e1958ef9d87914a58c 1617 SUPERFAMILY SSF55816 1017 1204 3.4E-36 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23460 db55138e66f049e1958ef9d87914a58c 1617 Gene3D G3DSA:3.90.780.10 1028 1203 4.5E-39 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23460 db55138e66f049e1958ef9d87914a58c 1617 ProSitePatterns PS00786 5'-nucleotidase signature 2. 788 799 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23460 db55138e66f049e1958ef9d87914a58c 1617 Gene3D G3DSA:3.60.21.10 68 417 7.7E-118 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_23460 db55138e66f049e1958ef9d87914a58c 1617 Gene3D G3DSA:3.90.780.10 471 654 7.3E-61 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23460 db55138e66f049e1958ef9d87914a58c 1617 PRINTS PR01607 Apyrase family signature 274 291 1.3E-23 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23460 db55138e66f049e1958ef9d87914a58c 1617 PRINTS PR01607 Apyrase family signature 490 513 1.3E-23 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23460 db55138e66f049e1958ef9d87914a58c 1617 PRINTS PR01607 Apyrase family signature 300 323 1.3E-23 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23460 db55138e66f049e1958ef9d87914a58c 1617 PRINTS PR01607 Apyrase family signature 591 610 1.3E-23 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23460 db55138e66f049e1958ef9d87914a58c 1617 PRINTS PR01607 Apyrase family signature 352 372 1.3E-23 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_23460 db55138e66f049e1958ef9d87914a58c 1617 PRINTS PR01607 Apyrase family signature 74 92 1.3E-23 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 N288_18370 b18c90f8ad552080894a87e92c88351f 690 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 687 26.612 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 N288_18370 b18c90f8ad552080894a87e92c88351f 690 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 688 2.4E-240 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 N288_18370 b18c90f8ad552080894a87e92c88351f 690 SUPERFAMILY SSF109604 339 490 1.49E-17 T 12-10-2018 N288_18370 b18c90f8ad552080894a87e92c88351f 690 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 554 1.2E-209 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 N288_18370 b18c90f8ad552080894a87e92c88351f 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 2.7E-38 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 N288_18370 b18c90f8ad552080894a87e92c88351f 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 2.7E-38 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 N288_18370 b18c90f8ad552080894a87e92c88351f 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 2.7E-38 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 N288_18370 b18c90f8ad552080894a87e92c88351f 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 243 258 2.7E-38 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 N288_18370 b18c90f8ad552080894a87e92c88351f 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 315 331 2.7E-38 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 N288_20995 93959bfce135e125935fb598297cd047 335 TIGRFAM TIGR02905 spore_yutH: spore coat protein YutH 3 314 8.4E-150 T 12-10-2018 IPR014254 Spore coat protein YutH N288_20995 93959bfce135e125935fb598297cd047 335 Gene3D G3DSA:3.90.1200.10 87 314 8.4E-26 T 12-10-2018 N288_20995 93959bfce135e125935fb598297cd047 335 SUPERFAMILY SSF56112 27 317 3.77E-12 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_21775 1ca7fee7ed5da10560c97cd3f1b44f1f 372 PIRSF PIRSF012569 1 369 5.2E-100 T 12-10-2018 IPR016599 Uncharacterised conserved protein UCP012569 N288_21775 1ca7fee7ed5da10560c97cd3f1b44f1f 372 Pfam PF13349 Putative adhesin 172 365 3.3E-14 T 12-10-2018 IPR025164 Putative adhesin N288_07740 f64b2e1ed3cd925a8551b824e53c470c 457 Pfam PF03448 MgtE intracellular N domain 36 138 6.2E-24 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain N288_07740 f64b2e1ed3cd925a8551b824e53c470c 457 SUPERFAMILY SSF161093 282 453 4.05E-54 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 N288_07740 f64b2e1ed3cd925a8551b824e53c470c 457 SMART SM00116 148 201 1.2E-4 T 12-10-2018 IPR000644 CBS domain N288_07740 f64b2e1ed3cd925a8551b824e53c470c 457 SMART SM00116 212 260 2.9E-7 T 12-10-2018 IPR000644 CBS domain N288_07740 f64b2e1ed3cd925a8551b824e53c470c 457 SUPERFAMILY SSF158791 14 138 5.49E-31 T 12-10-2018 N288_07740 f64b2e1ed3cd925a8551b824e53c470c 457 Pfam PF01769 Divalent cation transporter 325 446 1.3E-31 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 N288_07740 f64b2e1ed3cd925a8551b824e53c470c 457 Gene3D G3DSA:1.25.60.10 3 136 3.2E-45 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily N288_07740 f64b2e1ed3cd925a8551b824e53c470c 457 SUPERFAMILY SSF54631 140 277 4.93E-33 T 12-10-2018 N288_07740 f64b2e1ed3cd925a8551b824e53c470c 457 SMART SM00924 36 141 1.7E-25 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain N288_07740 f64b2e1ed3cd925a8551b824e53c470c 457 Gene3D G3DSA:1.10.357.20 277 454 4.1E-61 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain N288_07740 f64b2e1ed3cd925a8551b824e53c470c 457 TIGRFAM TIGR00400 mgtE: magnesium transporter 15 454 2.2E-129 T 12-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 N288_07740 f64b2e1ed3cd925a8551b824e53c470c 457 Gene3D G3DSA:3.10.580.10 137 265 3.4E-48 T 12-10-2018 N288_07740 f64b2e1ed3cd925a8551b824e53c470c 457 Pfam PF00571 CBS domain 141 197 4.5E-10 T 12-10-2018 IPR000644 CBS domain N288_07740 f64b2e1ed3cd925a8551b824e53c470c 457 Pfam PF00571 CBS domain 206 259 2.9E-7 T 12-10-2018 IPR000644 CBS domain N288_18155 22c5eca3fa44c0d5934fcafeaa96d6f2 185 SUPERFAMILY SSF100950 3 181 1.12E-47 T 12-10-2018 IPR037171 NagB/RpiA transferase-like N288_18155 22c5eca3fa44c0d5934fcafeaa96d6f2 185 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 4 180 6.8E-51 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase N288_18155 22c5eca3fa44c0d5934fcafeaa96d6f2 185 Gene3D G3DSA:3.40.50.10420 1 184 5.3E-61 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily N288_18155 22c5eca3fa44c0d5934fcafeaa96d6f2 185 PIRSF PIRSF006806 1 183 6.0E-45 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase N288_18155 22c5eca3fa44c0d5934fcafeaa96d6f2 185 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 4 180 5.5E-41 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase N288_10135 917bbaa089ac4243cfbc79812ee74b69 348 Gene3D G3DSA:3.40.50.300 25 266 9.4E-80 T 12-10-2018 N288_10135 917bbaa089ac4243cfbc79812ee74b69 348 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 3 323 1.5E-175 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 N288_10135 917bbaa089ac4243cfbc79812ee74b69 348 SMART SM00382 56 227 1.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_10135 917bbaa089ac4243cfbc79812ee74b69 348 Gene3D G3DSA:3.30.250.10 267 343 3.3E-29 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal N288_10135 917bbaa089ac4243cfbc79812ee74b69 348 Pfam PF00154 recA bacterial DNA recombination protein 7 267 1.4E-145 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 N288_10135 917bbaa089ac4243cfbc79812ee74b69 348 SUPERFAMILY SSF52540 4 266 2.97E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_10135 917bbaa089ac4243cfbc79812ee74b69 348 Hamap MF_00268 Protein RecA [recA]. 4 328 53.062 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 N288_10135 917bbaa089ac4243cfbc79812ee74b69 348 ProSitePatterns PS00321 recA signature. 212 220 - T 12-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 N288_10135 917bbaa089ac4243cfbc79812ee74b69 348 SUPERFAMILY SSF54752 267 326 2.62E-22 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal N288_10135 917bbaa089ac4243cfbc79812ee74b69 348 PRINTS PR00142 RecA protein signature 92 121 3.9E-86 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 N288_10135 917bbaa089ac4243cfbc79812ee74b69 348 PRINTS PR00142 RecA protein signature 164 193 3.9E-86 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 N288_10135 917bbaa089ac4243cfbc79812ee74b69 348 PRINTS PR00142 RecA protein signature 242 271 3.9E-86 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 N288_10135 917bbaa089ac4243cfbc79812ee74b69 348 PRINTS PR00142 RecA protein signature 296 313 3.9E-86 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 N288_10135 917bbaa089ac4243cfbc79812ee74b69 348 PRINTS PR00142 RecA protein signature 126 155 3.9E-86 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 N288_10135 917bbaa089ac4243cfbc79812ee74b69 348 PRINTS PR00142 RecA protein signature 209 237 3.9E-86 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 N288_20125 d6eec367c6842bb57b47642194a0b074 101 Pfam PF00581 Rhodanese-like domain 8 98 1.2E-14 T 12-10-2018 IPR001763 Rhodanese-like domain N288_20125 d6eec367c6842bb57b47642194a0b074 101 SMART SM00450 8 101 3.3E-14 T 12-10-2018 IPR001763 Rhodanese-like domain N288_20125 d6eec367c6842bb57b47642194a0b074 101 SUPERFAMILY SSF52821 3 98 7.33E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_20125 d6eec367c6842bb57b47642194a0b074 101 Gene3D G3DSA:3.40.250.10 5 100 4.7E-28 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_23240 c0f9e655d5bff25cba8db8a9809e08fe 176 SUPERFAMILY SSF46689 8 100 7.35E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_24880 cb2575b7b9e1587539e74d6b1db0701a 216 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 8 207 4.1E-54 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 N288_24880 cb2575b7b9e1587539e74d6b1db0701a 216 Pfam PF01081 KDPG and KHG aldolase 8 201 3.2E-42 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 N288_24880 cb2575b7b9e1587539e74d6b1db0701a 216 SUPERFAMILY SSF51569 2 209 1.06E-61 T 12-10-2018 N288_24880 cb2575b7b9e1587539e74d6b1db0701a 216 Gene3D G3DSA:3.20.20.70 1 215 7.7E-70 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_01300 63987de3eed635c1c5817ffe5f8096e8 357 Gene3D G3DSA:3.90.1150.10 25 349 1.1E-104 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_01300 63987de3eed635c1c5817ffe5f8096e8 357 Gene3D G3DSA:3.40.640.10 37 257 1.1E-104 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_01300 63987de3eed635c1c5817ffe5f8096e8 357 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 209 222 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 N288_01300 63987de3eed635c1c5817ffe5f8096e8 357 SUPERFAMILY SSF53383 3 352 4.87E-75 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_01300 63987de3eed635c1c5817ffe5f8096e8 357 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 6 349 2.8E-89 T 12-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 N288_01300 63987de3eed635c1c5817ffe5f8096e8 357 Pfam PF00155 Aminotransferase class I and II 25 349 1.4E-42 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 N288_00640 e087056694734a7b89c26d1ef5cb60f2 465 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 4 464 3.1E-189 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 N288_00640 e087056694734a7b89c26d1ef5cb60f2 465 SMART SM00840 353 416 5.1E-16 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 N288_00640 e087056694734a7b89c26d1ef5cb60f2 465 SUPERFAMILY SSF47323 318 464 4.71E-34 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_00640 e087056694734a7b89c26d1ef5cb60f2 465 Gene3D G3DSA:3.40.50.620 1 305 1.1E-135 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_00640 e087056694734a7b89c26d1ef5cb60f2 465 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 465 39.244 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 N288_00640 e087056694734a7b89c26d1ef5cb60f2 465 Pfam PF09190 DALR domain 353 409 1.3E-15 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 N288_00640 e087056694734a7b89c26d1ef5cb60f2 465 SUPERFAMILY SSF52374 4 312 1.82E-103 T 12-10-2018 N288_00640 e087056694734a7b89c26d1ef5cb60f2 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.2E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 N288_00640 e087056694734a7b89c26d1ef5cb60f2 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 1.2E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 N288_00640 e087056694734a7b89c26d1ef5cb60f2 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 1.2E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 N288_00640 e087056694734a7b89c26d1ef5cb60f2 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.2E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 N288_00640 e087056694734a7b89c26d1ef5cb60f2 465 Gene3D G3DSA:1.20.120.1910 306 465 1.3E-34 T 12-10-2018 N288_00640 e087056694734a7b89c26d1ef5cb60f2 465 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 313 1.4E-137 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 N288_10605 9abc5ace1add3a5ec6ab17a250c9f9ee 227 SMART SM00862 149 225 7.5E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_10605 9abc5ace1add3a5ec6ab17a250c9f9ee 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 225 9.1E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_10605 9abc5ace1add3a5ec6ab17a250c9f9ee 227 SUPERFAMILY SSF46894 125 225 1.7E-28 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_10605 9abc5ace1add3a5ec6ab17a250c9f9ee 227 Pfam PF00072 Response regulator receiver domain 4 112 6.4E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_10605 9abc5ace1add3a5ec6ab17a250c9f9ee 227 SUPERFAMILY SSF52172 3 124 5.83E-42 T 12-10-2018 IPR011006 CheY-like superfamily N288_10605 9abc5ace1add3a5ec6ab17a250c9f9ee 227 Gene3D G3DSA:1.10.10.10 128 227 4.2E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_10605 9abc5ace1add3a5ec6ab17a250c9f9ee 227 SMART SM00448 2 112 2.5E-44 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_10605 9abc5ace1add3a5ec6ab17a250c9f9ee 227 Gene3D G3DSA:3.40.50.2300 1 127 3.9E-39 T 12-10-2018 N288_10105 38ef70eefc3633d83b2afadc30c9a143 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 246 4.1E-50 T 12-10-2018 N288_10105 38ef70eefc3633d83b2afadc30c9a143 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.5E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10105 38ef70eefc3633d83b2afadc30c9a143 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 6.5E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10105 38ef70eefc3633d83b2afadc30c9a143 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.5E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10105 38ef70eefc3633d83b2afadc30c9a143 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 6.5E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10105 38ef70eefc3633d83b2afadc30c9a143 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.5E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10105 38ef70eefc3633d83b2afadc30c9a143 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 6.5E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10105 38ef70eefc3633d83b2afadc30c9a143 248 SUPERFAMILY SSF51735 11 247 1.16E-71 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_10105 38ef70eefc3633d83b2afadc30c9a143 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.9E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10105 38ef70eefc3633d83b2afadc30c9a143 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.9E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10105 38ef70eefc3633d83b2afadc30c9a143 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.9E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10105 38ef70eefc3633d83b2afadc30c9a143 248 Gene3D G3DSA:3.40.50.720 5 247 2.0E-70 T 12-10-2018 N288_24795 99d9eb7ef365e40402f69ed3ba30f1ef 179 Gene3D G3DSA:1.10.10.10 1 92 2.5E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_24795 99d9eb7ef365e40402f69ed3ba30f1ef 179 SUPERFAMILY SSF46785 3 175 4.0E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_24795 99d9eb7ef365e40402f69ed3ba30f1ef 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 82 1.4E-7 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal N288_21725 808d30e899ea926400cc9313efc01125 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 3.4E-53 T 12-10-2018 N288_21725 808d30e899ea926400cc9313efc01125 217 Gene3D G3DSA:1.10.150.240 19 82 6.6E-52 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 N288_21725 808d30e899ea926400cc9313efc01125 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 127 143 1.5E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_21725 808d30e899ea926400cc9313efc01125 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 145 165 1.5E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_21725 808d30e899ea926400cc9313efc01125 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 1.5E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_21725 808d30e899ea926400cc9313efc01125 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 1.5E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_21725 808d30e899ea926400cc9313efc01125 217 Hamap MF_01250 Pyrophosphatase PpaX [ppaX]. 3 216 45.438 T 12-10-2018 IPR023733 Pyrophosphatase PpaX GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 N288_21725 808d30e899ea926400cc9313efc01125 217 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 177 1.1E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_21725 808d30e899ea926400cc9313efc01125 217 Gene3D G3DSA:3.40.50.1000 8 204 6.6E-52 T 12-10-2018 IPR023214 HAD superfamily N288_21725 808d30e899ea926400cc9313efc01125 217 SUPERFAMILY SSF56784 4 214 1.84E-59 T 12-10-2018 IPR036412 HAD-like superfamily N288_10325 69845d5ed5e971622ec3ca989340d8d0 93 Pfam PF14074 Protein of unknown function (DUF4257) 5 84 1.1E-31 T 12-10-2018 IPR025353 Protein of unknown function DUF4257) N288_10325 69845d5ed5e971622ec3ca989340d8d0 93 ProDom PD866859 YTVB PLASMID MEMBRANE TRANSMEMBRANE 1 92 6.0E-20 T 12-10-2018 N288_17065 b527d59f8cd882916dc8343af487cfe6 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.1E-22 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 N288_17065 b527d59f8cd882916dc8343af487cfe6 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.1E-22 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 N288_17065 b527d59f8cd882916dc8343af487cfe6 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.1E-22 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 N288_17065 b527d59f8cd882916dc8343af487cfe6 90 SMART SM00411 1 90 1.6E-52 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 N288_17065 b527d59f8cd882916dc8343af487cfe6 90 SUPERFAMILY SSF47729 1 90 2.21E-35 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 N288_17065 b527d59f8cd882916dc8343af487cfe6 90 Gene3D G3DSA:4.10.520.10 1 90 2.0E-40 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 N288_17065 b527d59f8cd882916dc8343af487cfe6 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 N288_17065 b527d59f8cd882916dc8343af487cfe6 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.9E-37 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 N288_03645 6640c39aad16d5b9e9f1ed8ccf35ba3d 206 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 118 127 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 N288_03645 6640c39aad16d5b9e9f1ed8ccf35ba3d 206 Gene3D G3DSA:2.40.260.10 26 205 3.0E-44 T 12-10-2018 IPR023365 Sortase domain superfamily N288_03645 6640c39aad16d5b9e9f1ed8ccf35ba3d 206 TIGRFAM TIGR01076 sortase_fam: sortase 77 202 1.8E-32 T 12-10-2018 IPR005754 Sortase family N288_03645 6640c39aad16d5b9e9f1ed8ccf35ba3d 206 SUPERFAMILY SSF63817 69 202 4.84E-35 T 12-10-2018 IPR023365 Sortase domain superfamily N288_03645 6640c39aad16d5b9e9f1ed8ccf35ba3d 206 Pfam PF04203 Sortase family 79 201 1.2E-29 T 12-10-2018 IPR005754 Sortase family N288_04230 e986b8fb04e41e4a15188c43fd8e9014 224 SUPERFAMILY SSF51905 2 72 3.63E-16 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_04230 e986b8fb04e41e4a15188c43fd8e9014 224 Gene3D G3DSA:3.90.190.10 73 223 2.2E-18 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like N288_04230 e986b8fb04e41e4a15188c43fd8e9014 224 SMART SM00195 90 223 0.0037 T 12-10-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 N288_04230 e986b8fb04e41e4a15188c43fd8e9014 224 Pfam PF00782 Dual specificity phosphatase, catalytic domain 98 217 8.0E-11 T 12-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 N288_04230 e986b8fb04e41e4a15188c43fd8e9014 224 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1 59 2.4E-9 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 N288_04230 e986b8fb04e41e4a15188c43fd8e9014 224 Gene3D G3DSA:3.50.50.60 1 72 1.2E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_04230 e986b8fb04e41e4a15188c43fd8e9014 224 SUPERFAMILY SSF52799 93 217 2.4E-17 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like N288_04230 e986b8fb04e41e4a15188c43fd8e9014 224 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 167 177 - T 12-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 N288_10915 3abd52c0beeb31ccfd5fee3db3d8b5db 225 Pfam PF01902 Diphthamide synthase 1 217 2.2E-35 T 12-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 N288_10915 3abd52c0beeb31ccfd5fee3db3d8b5db 225 Gene3D G3DSA:3.90.1490.10 128 224 4.4E-16 T 12-10-2018 N288_10915 3abd52c0beeb31ccfd5fee3db3d8b5db 225 SUPERFAMILY SSF52402 1 221 9.43E-55 T 12-10-2018 N288_10915 3abd52c0beeb31ccfd5fee3db3d8b5db 225 Gene3D G3DSA:3.40.50.620 1 125 2.4E-24 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_10915 3abd52c0beeb31ccfd5fee3db3d8b5db 225 TIGRFAM TIGR00290 MJ0570_dom: MJ0570-related uncharacterized domain 1 219 2.5E-34 T 12-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 N288_11030 e3131cc77761780a5ebff88280d9500a 320 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_11030 e3131cc77761780a5ebff88280d9500a 320 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 168 1.6E-15 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_11030 e3131cc77761780a5ebff88280d9500a 320 SUPERFAMILY SSF88946 18 98 5.89E-17 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_11030 e3131cc77761780a5ebff88280d9500a 320 SUPERFAMILY SSF54427 191 302 1.55E-5 T 12-10-2018 IPR032710 NTF2-like domain superfamily N288_11030 e3131cc77761780a5ebff88280d9500a 320 Gene3D G3DSA:3.10.450.50 185 308 1.7E-5 T 12-10-2018 N288_11030 e3131cc77761780a5ebff88280d9500a 320 Gene3D G3DSA:1.10.1740.10 10 92 9.2E-19 T 12-10-2018 N288_11030 e3131cc77761780a5ebff88280d9500a 320 SUPERFAMILY SSF88659 108 172 1.83E-7 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_11030 e3131cc77761780a5ebff88280d9500a 320 Gene3D G3DSA:1.10.10.10 113 173 1.0E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_11030 e3131cc77761780a5ebff88280d9500a 320 Pfam PF04542 Sigma-70 region 2 25 90 1.2E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_18695 afb62567bfa674783ebfa99e75291e78 211 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 192 1.2E-43 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 N288_18695 afb62567bfa674783ebfa99e75291e78 211 TIGRFAM TIGR00235 udk: uridine kinase 3 206 3.5E-92 T 12-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 N288_18695 afb62567bfa674783ebfa99e75291e78 211 Gene3D G3DSA:3.40.50.300 1 211 7.5E-65 T 12-10-2018 N288_18695 afb62567bfa674783ebfa99e75291e78 211 SUPERFAMILY SSF52540 3 197 4.12E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_18695 afb62567bfa674783ebfa99e75291e78 211 PRINTS PR00988 Uridine kinase signature 35 46 8.5E-37 T 12-10-2018 N288_18695 afb62567bfa674783ebfa99e75291e78 211 PRINTS PR00988 Uridine kinase signature 136 146 8.5E-37 T 12-10-2018 N288_18695 afb62567bfa674783ebfa99e75291e78 211 PRINTS PR00988 Uridine kinase signature 172 185 8.5E-37 T 12-10-2018 N288_18695 afb62567bfa674783ebfa99e75291e78 211 PRINTS PR00988 Uridine kinase signature 150 161 8.5E-37 T 12-10-2018 N288_18695 afb62567bfa674783ebfa99e75291e78 211 PRINTS PR00988 Uridine kinase signature 5 22 8.5E-37 T 12-10-2018 N288_18695 afb62567bfa674783ebfa99e75291e78 211 PRINTS PR00988 Uridine kinase signature 80 95 8.5E-37 T 12-10-2018 N288_18695 afb62567bfa674783ebfa99e75291e78 211 Hamap MF_00551 Uridine kinase [udk]. 2 206 41.923 T 12-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 N288_04875 1f4f0a59efc17db3c695be28f0e6e5d6 399 SUPERFAMILY SSF46785 16 82 1.73E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_04875 1f4f0a59efc17db3c695be28f0e6e5d6 399 Gene3D G3DSA:1.10.10.10 7 83 1.9E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_04875 1f4f0a59efc17db3c695be28f0e6e5d6 399 SUPERFAMILY SSF53067 88 389 6.48E-57 T 12-10-2018 N288_04875 1f4f0a59efc17db3c695be28f0e6e5d6 399 Pfam PF13412 Winged helix-turn-helix DNA-binding 25 64 9.7E-6 T 12-10-2018 N288_04875 1f4f0a59efc17db3c695be28f0e6e5d6 399 Pfam PF00480 ROK family 91 388 1.9E-72 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 N288_04875 1f4f0a59efc17db3c695be28f0e6e5d6 399 Gene3D G3DSA:3.30.420.40 211 374 1.9E-90 T 12-10-2018 N288_04875 1f4f0a59efc17db3c695be28f0e6e5d6 399 ProSitePatterns PS01125 ROK family signature. 221 248 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 N288_04875 1f4f0a59efc17db3c695be28f0e6e5d6 399 Gene3D G3DSA:3.30.420.40 95 384 1.9E-90 T 12-10-2018 N288_09990 91cf1e802eb37ecdec45d44018f9f657 412 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 33 56 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 N288_09990 91cf1e802eb37ecdec45d44018f9f657 412 SUPERFAMILY SSF63411 228 401 1.53E-47 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 N288_09990 91cf1e802eb37ecdec45d44018f9f657 412 SUPERFAMILY SSF63411 3 204 4.62E-60 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 N288_09990 91cf1e802eb37ecdec45d44018f9f657 412 Pfam PF05193 Peptidase M16 inactive domain 169 337 2.9E-38 T 12-10-2018 IPR007863 Peptidase M16, C-terminal N288_09990 91cf1e802eb37ecdec45d44018f9f657 412 Gene3D G3DSA:3.30.830.10 218 411 2.7E-58 T 12-10-2018 N288_09990 91cf1e802eb37ecdec45d44018f9f657 412 Pfam PF00675 Insulinase (Peptidase family M16) 12 159 7.4E-47 T 12-10-2018 IPR011765 Peptidase M16, N-terminal N288_09990 91cf1e802eb37ecdec45d44018f9f657 412 Gene3D G3DSA:3.30.830.10 1 215 8.6E-80 T 12-10-2018 N288_02850 85de70a2f66c08380e53d42cf03b14b5 132 Gene3D G3DSA:1.10.10.10 2 132 1.8E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_02850 85de70a2f66c08380e53d42cf03b14b5 132 SUPERFAMILY SSF46785 12 129 7.56E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_02850 85de70a2f66c08380e53d42cf03b14b5 132 SMART SM00347 17 117 3.9E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_02850 85de70a2f66c08380e53d42cf03b14b5 132 Pfam PF01047 MarR family 24 82 3.9E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_07355 6cd2cc3404115802d1e6fc7a7fd68d53 588 Gene3D G3DSA:3.20.20.80 133 498 4.1E-161 T 12-10-2018 N288_07355 6cd2cc3404115802d1e6fc7a7fd68d53 588 Gene3D G3DSA:2.60.40.1180 507 587 5.0E-15 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_07355 6cd2cc3404115802d1e6fc7a7fd68d53 588 Pfam PF16657 Maltogenic Amylase, C-terminal domain 507 583 2.0E-10 T 12-10-2018 IPR032091 Maltogenic Amylase, C-terminal N288_07355 6cd2cc3404115802d1e6fc7a7fd68d53 588 SMART SM00642 139 497 1.8E-122 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_07355 6cd2cc3404115802d1e6fc7a7fd68d53 588 SUPERFAMILY SSF51011 508 584 5.08E-13 T 12-10-2018 N288_07355 6cd2cc3404115802d1e6fc7a7fd68d53 588 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 121 1.3E-41 T 12-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 N288_07355 6cd2cc3404115802d1e6fc7a7fd68d53 588 SUPERFAMILY SSF51445 70 503 5.4E-125 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_07355 6cd2cc3404115802d1e6fc7a7fd68d53 588 Gene3D G3DSA:2.60.40.10 2 125 2.9E-37 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_07355 6cd2cc3404115802d1e6fc7a7fd68d53 588 Gene3D G3DSA:3.90.400.10 246 299 4.1E-161 T 12-10-2018 N288_07355 6cd2cc3404115802d1e6fc7a7fd68d53 588 Pfam PF00128 Alpha amylase, catalytic domain 173 469 3.1E-85 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_14885 caa7db391069af0e64dc817192d3920f 591 Pfam PF01019 Gamma-glutamyltranspeptidase 61 576 3.2E-172 T 12-10-2018 N288_14885 caa7db391069af0e64dc817192d3920f 591 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 402 420 9.8E-78 T 12-10-2018 N288_14885 caa7db391069af0e64dc817192d3920f 591 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 258 274 9.8E-78 T 12-10-2018 N288_14885 caa7db391069af0e64dc817192d3920f 591 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 288 307 9.8E-78 T 12-10-2018 N288_14885 caa7db391069af0e64dc817192d3920f 591 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 481 498 9.8E-78 T 12-10-2018 N288_14885 caa7db391069af0e64dc817192d3920f 591 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 426 444 9.8E-78 T 12-10-2018 N288_14885 caa7db391069af0e64dc817192d3920f 591 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 161 180 9.8E-78 T 12-10-2018 N288_14885 caa7db391069af0e64dc817192d3920f 591 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 457 472 9.8E-78 T 12-10-2018 N288_14885 caa7db391069af0e64dc817192d3920f 591 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 143 161 9.8E-78 T 12-10-2018 N288_14885 caa7db391069af0e64dc817192d3920f 591 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 68 93 9.8E-78 T 12-10-2018 N288_14885 caa7db391069af0e64dc817192d3920f 591 Gene3D G3DSA:3.60.20.40 402 580 9.1E-70 T 12-10-2018 N288_14885 caa7db391069af0e64dc817192d3920f 591 Gene3D G3DSA:1.10.246.130 274 401 7.3E-53 T 12-10-2018 N288_14885 caa7db391069af0e64dc817192d3920f 591 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 402 426 - T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 N288_14885 caa7db391069af0e64dc817192d3920f 591 SUPERFAMILY SSF56235 40 581 1.31E-177 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_14885 caa7db391069af0e64dc817192d3920f 591 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 46 574 4.2E-205 T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 N288_25450 37f1ad475a596361dc2ad05ca5c08ad1 448 Gene3D G3DSA:3.30.590.10 114 448 1.7E-123 T 12-10-2018 N288_25450 37f1ad475a596361dc2ad05ca5c08ad1 448 SUPERFAMILY SSF55931 111 444 3.24E-117 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 N288_25450 37f1ad475a596361dc2ad05ca5c08ad1 448 ProSitePatterns PS00180 Glutamine synthetase signature 1. 57 75 - T 12-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 N288_25450 37f1ad475a596361dc2ad05ca5c08ad1 448 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 14 444 1.7E-151 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 N288_25450 37f1ad475a596361dc2ad05ca5c08ad1 448 SMART SM01230 111 358 2.1E-118 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 N288_25450 37f1ad475a596361dc2ad05ca5c08ad1 448 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 238 253 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 N288_25450 37f1ad475a596361dc2ad05ca5c08ad1 448 SUPERFAMILY SSF54368 16 110 8.5E-25 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 N288_25450 37f1ad475a596361dc2ad05ca5c08ad1 448 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 23 105 2.5E-26 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 N288_25450 37f1ad475a596361dc2ad05ca5c08ad1 448 Pfam PF00120 Glutamine synthetase, catalytic domain 112 444 7.4E-124 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 N288_25450 37f1ad475a596361dc2ad05ca5c08ad1 448 Gene3D G3DSA:3.10.20.70 8 113 3.6E-33 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 N288_03745 e1bd1eaacebe01d827e3ffbd0fcb4c80 250 Pfam PF00557 Metallopeptidase family M24 12 240 4.7E-57 T 12-10-2018 IPR000994 Peptidase M24 N288_03745 e1bd1eaacebe01d827e3ffbd0fcb4c80 250 Hamap MF_01974 Methionine aminopeptidase [map]. 3 249 39.814 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_03745 e1bd1eaacebe01d827e3ffbd0fcb4c80 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 68 81 1.9E-19 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_03745 e1bd1eaacebe01d827e3ffbd0fcb4c80 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 160 172 1.9E-19 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_03745 e1bd1eaacebe01d827e3ffbd0fcb4c80 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 1.9E-19 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_03745 e1bd1eaacebe01d827e3ffbd0fcb4c80 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 1.9E-19 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_03745 e1bd1eaacebe01d827e3ffbd0fcb4c80 250 Gene3D G3DSA:3.90.230.10 2 250 8.0E-106 T 12-10-2018 N288_03745 e1bd1eaacebe01d827e3ffbd0fcb4c80 250 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 166 184 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_03745 e1bd1eaacebe01d827e3ffbd0fcb4c80 250 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 248 4.0E-95 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_03745 e1bd1eaacebe01d827e3ffbd0fcb4c80 250 SUPERFAMILY SSF55920 2 248 5.76E-86 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like N288_02505 a7a43de9771ed661bb96dffb97bfc9ef 172 Pfam PF13673 Acetyltransferase (GNAT) domain 45 140 7.1E-13 T 12-10-2018 IPR000182 GNAT domain N288_02505 a7a43de9771ed661bb96dffb97bfc9ef 172 SUPERFAMILY SSF55729 1 143 1.13E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_02505 a7a43de9771ed661bb96dffb97bfc9ef 172 Gene3D G3DSA:3.40.630.30 1 168 9.2E-38 T 12-10-2018 N288_06595 9d72c2ffc0341925090d4a9c70304d3f 585 Pfam PF00664 ABC transporter transmembrane region 20 292 1.2E-45 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 N288_06595 9d72c2ffc0341925090d4a9c70304d3f 585 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_06595 9d72c2ffc0341925090d4a9c70304d3f 585 SUPERFAMILY SSF52540 332 573 2.52E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_06595 9d72c2ffc0341925090d4a9c70304d3f 585 Gene3D G3DSA:3.40.50.300 330 584 2.2E-81 T 12-10-2018 N288_06595 9d72c2ffc0341925090d4a9c70304d3f 585 Gene3D G3DSA:1.20.1560.10 2 325 7.0E-84 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_06595 9d72c2ffc0341925090d4a9c70304d3f 585 Pfam PF00005 ABC transporter 354 501 2.4E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_06595 9d72c2ffc0341925090d4a9c70304d3f 585 SMART SM00382 363 549 2.9E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_06595 9d72c2ffc0341925090d4a9c70304d3f 585 SUPERFAMILY SSF90123 6 325 2.35E-78 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_05185 44aeb84df8ec3fcd30eec36cf71006d3 253 Pfam PF03741 Integral membrane protein TerC family 33 214 1.6E-52 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 N288_05185 44aeb84df8ec3fcd30eec36cf71006d3 253 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 30 242 9.4E-78 T 12-10-2018 IPR022493 Integral membrane YkoY N288_12345 e35b8d7b836a7213adab183973d8d36f 487 SUPERFAMILY SSF54675 9 140 4.19E-52 T 12-10-2018 N288_12345 e35b8d7b836a7213adab183973d8d36f 487 Gene3D G3DSA:3.20.140.10 12 472 8.6E-208 T 12-10-2018 N288_12345 e35b8d7b836a7213adab183973d8d36f 487 SUPERFAMILY SSF51690 141 480 3.24E-130 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 N288_12345 e35b8d7b836a7213adab183973d8d36f 487 PIRSF PIRSF000484 7 482 2.6E-155 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 N288_12345 e35b8d7b836a7213adab183973d8d36f 487 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 11 465 2.0E-183 T 12-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 N288_12345 e35b8d7b836a7213adab183973d8d36f 487 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 158 357 7.7E-10 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 N288_12345 e35b8d7b836a7213adab183973d8d36f 487 Gene3D G3DSA:3.20.20.70 153 320 8.6E-208 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_15245 9003a6f1ee1e40976d6d9a4697787110 565 SMART SM00304 207 260 6.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_15245 9003a6f1ee1e40976d6d9a4697787110 565 SUPERFAMILY SSF58104 233 564 8.89E-62 T 12-10-2018 N288_15245 9003a6f1ee1e40976d6d9a4697787110 565 Pfam PF00672 HAMP domain 207 255 1.0E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_15245 9003a6f1ee1e40976d6d9a4697787110 565 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 352 518 6.7E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_15245 9003a6f1ee1e40976d6d9a4697787110 565 SMART SM00283 289 564 9.1E-63 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_15245 9003a6f1ee1e40976d6d9a4697787110 565 Gene3D G3DSA:1.10.287.950 207 565 6.2E-59 T 12-10-2018 N288_21780 d749a03587cd1d4af79adca9b485291e 105 ProDom PD070949 MEMBRANE PROTEIN YVLA SPANNING SIMILAR SE2241 LMO0604 LMO2177 LIN2280 INTEGRAL 1 101 2.0E-12 T 12-10-2018 N288_21780 d749a03587cd1d4af79adca9b485291e 105 Pfam PF09685 Domain of unknown function (DUF4870) 7 96 9.8E-7 T 12-10-2018 IPR019109 Protein of unknown function DUF4870 N288_09545 19d82b5e713e1619fc1149a6e7a4e799 338 SMART SM00382 45 189 1.4E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_09545 19d82b5e713e1619fc1149a6e7a4e799 338 Gene3D G3DSA:1.10.8.300 212 327 2.7E-29 T 12-10-2018 N288_09545 19d82b5e713e1619fc1149a6e7a4e799 338 SUPERFAMILY SSF52540 15 303 1.15E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_09545 19d82b5e713e1619fc1149a6e7a4e799 338 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 48 180 9.0E-61 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 N288_09545 19d82b5e713e1619fc1149a6e7a4e799 338 PIRSF PIRSF002849 1 332 2.1E-117 T 12-10-2018 N288_09545 19d82b5e713e1619fc1149a6e7a4e799 338 Gene3D G3DSA:3.40.50.300 29 198 8.4E-46 T 12-10-2018 N288_24065 edfb203318c24ad4ee7d78ecf2bb99f0 166 PIRSF PIRSF038931 1 166 1.1E-54 T 12-10-2018 IPR014099 Spore coat protein GerQ N288_24065 edfb203318c24ad4ee7d78ecf2bb99f0 166 TIGRFAM TIGR02728 spore_gerQ: spore coat protein GerQ 73 154 4.9E-44 T 12-10-2018 IPR014099 Spore coat protein GerQ N288_24065 edfb203318c24ad4ee7d78ecf2bb99f0 166 Pfam PF09671 Spore coat protein (Spore_GerQ) 75 150 1.2E-41 T 12-10-2018 IPR014099 Spore coat protein GerQ N288_03135 fdcfcaed5f033a1fe31972c12dc0e88f 67 Pfam PF02597 ThiS family 10 67 4.5E-13 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 N288_03135 fdcfcaed5f033a1fe31972c12dc0e88f 67 Gene3D G3DSA:3.10.20.30 3 67 2.8E-18 T 12-10-2018 IPR012675 Beta-grasp domain superfamily N288_03135 fdcfcaed5f033a1fe31972c12dc0e88f 67 SUPERFAMILY SSF54285 2 66 1.6E-15 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp N288_03135 fdcfcaed5f033a1fe31972c12dc0e88f 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 5 67 2.8E-17 T 12-10-2018 IPR010035 ThiS, thiamine-biosynthesis N288_08160 3f5f144993c569a7f7cd658516ac6b67 175 Gene3D G3DSA:1.10.1740.10 1 99 1.5E-25 T 12-10-2018 N288_08160 3f5f144993c569a7f7cd658516ac6b67 175 SUPERFAMILY SSF88946 7 88 1.44E-24 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_08160 3f5f144993c569a7f7cd658516ac6b67 175 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 34 65 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_08160 3f5f144993c569a7f7cd658516ac6b67 175 Pfam PF08281 Sigma-70, region 4 109 160 1.8E-10 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_08160 3f5f144993c569a7f7cd658516ac6b67 175 SUPERFAMILY SSF88659 88 166 1.72E-12 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_08160 3f5f144993c569a7f7cd658516ac6b67 175 Gene3D G3DSA:1.10.10.10 105 170 2.5E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_08160 3f5f144993c569a7f7cd658516ac6b67 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 164 9.4E-27 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_08160 3f5f144993c569a7f7cd658516ac6b67 175 Pfam PF04542 Sigma-70 region 2 14 80 4.2E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_19890 4fb02ea9d2a0aa1685900f621c5048a4 210 SUPERFAMILY SSF55729 43 119 1.34E-7 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_19890 4fb02ea9d2a0aa1685900f621c5048a4 210 PIRSF PIRSF021278 2 210 5.6E-88 T 12-10-2018 IPR024699 Acetoin utilization protein AcuA GO:0019152|GO:0045150 N288_19890 4fb02ea9d2a0aa1685900f621c5048a4 210 Pfam PF00583 Acetyltransferase (GNAT) family 35 118 1.0E-5 T 12-10-2018 IPR000182 GNAT domain N288_19890 4fb02ea9d2a0aa1685900f621c5048a4 210 Gene3D G3DSA:3.40.630.30 2 210 4.1E-88 T 12-10-2018 N288_14810 baca9abd9fcc318446a7b900e0d0484d 336 Gene3D G3DSA:3.30.930.10 14 332 2.0E-136 T 12-10-2018 N288_14810 baca9abd9fcc318446a7b900e0d0484d 336 SUPERFAMILY SSF55681 17 329 5.97E-87 T 12-10-2018 N288_14810 baca9abd9fcc318446a7b900e0d0484d 336 PIRSF PIRSF001555 9 336 6.8E-149 T 12-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 N288_14810 baca9abd9fcc318446a7b900e0d0484d 336 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 19 329 3.9E-109 T 12-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 N288_14810 baca9abd9fcc318446a7b900e0d0484d 336 Pfam PF03590 Aspartate-ammonia ligase 22 246 4.6E-100 T 12-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 N288_14810 baca9abd9fcc318446a7b900e0d0484d 336 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 13 332 47.256 T 12-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 N288_00490 2c11cdc45e8cf80c2179db9d38207254 71 SUPERFAMILY SSF47413 4 66 7.17E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_00490 2c11cdc45e8cf80c2179db9d38207254 71 SMART SM00530 9 64 1.2E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_00490 2c11cdc45e8cf80c2179db9d38207254 71 Pfam PF01381 Helix-turn-helix 10 64 1.5E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_00490 2c11cdc45e8cf80c2179db9d38207254 71 Gene3D G3DSA:1.10.260.40 2 71 3.6E-17 T 12-10-2018 N288_23510 ac02338eddaa3cb7ef2310861f0dd02e 121 SUPERFAMILY SSF50249 1 113 1.84E-41 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_23510 ac02338eddaa3cb7ef2310861f0dd02e 121 Gene3D G3DSA:2.40.50.140 1 111 4.5E-44 T 12-10-2018 N288_23510 ac02338eddaa3cb7ef2310861f0dd02e 121 Pfam PF00436 Single-strand binding protein family 2 103 9.5E-34 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 N288_23510 ac02338eddaa3cb7ef2310861f0dd02e 121 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 32.799 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 N288_23510 ac02338eddaa3cb7ef2310861f0dd02e 121 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 109 3.6E-35 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 N288_23510 ac02338eddaa3cb7ef2310861f0dd02e 121 PIRSF PIRSF002070 1 120 6.7E-36 T 12-10-2018 N288_16335 8f79eb90cbbf345e33d8dcd50840a229 422 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 421 2.0E-26 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 N288_16335 8f79eb90cbbf345e33d8dcd50840a229 422 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 51 64 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 N288_16335 8f79eb90cbbf345e33d8dcd50840a229 422 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 316 3.8E-76 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme N288_16335 8f79eb90cbbf345e33d8dcd50840a229 422 Gene3D G3DSA:3.40.1020.10 326 422 3.9E-8 T 12-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 N288_16335 8f79eb90cbbf345e33d8dcd50840a229 422 Gene3D G3DSA:3.40.50.1100 59 158 2.9E-114 T 12-10-2018 N288_16335 8f79eb90cbbf345e33d8dcd50840a229 422 SUPERFAMILY SSF53686 13 365 1.23E-97 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme N288_16335 8f79eb90cbbf345e33d8dcd50840a229 422 TIGRFAM TIGR02079 THD1: threonine dehydratase 15 422 3.1E-191 T 12-10-2018 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 N288_16335 8f79eb90cbbf345e33d8dcd50840a229 422 SUPERFAMILY SSF55021 340 415 4.3E-10 T 12-10-2018 N288_16335 8f79eb90cbbf345e33d8dcd50840a229 422 Gene3D G3DSA:3.40.50.1100 24 325 2.9E-114 T 12-10-2018 N288_00850 2e2cb088c826223b08f50f26c79bdfee 248 Pfam PF00557 Metallopeptidase family M24 12 239 1.6E-56 T 12-10-2018 IPR000994 Peptidase M24 N288_00850 2e2cb088c826223b08f50f26c79bdfee 248 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 42.679 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_00850 2e2cb088c826223b08f50f26c79bdfee 248 SUPERFAMILY SSF55920 1 247 7.46E-94 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like N288_00850 2e2cb088c826223b08f50f26c79bdfee 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 6.5E-23 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_00850 2e2cb088c826223b08f50f26c79bdfee 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 6.5E-23 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_00850 2e2cb088c826223b08f50f26c79bdfee 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 6.5E-23 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_00850 2e2cb088c826223b08f50f26c79bdfee 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 6.5E-23 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_00850 2e2cb088c826223b08f50f26c79bdfee 248 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_00850 2e2cb088c826223b08f50f26c79bdfee 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 1.1E-101 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_00850 2e2cb088c826223b08f50f26c79bdfee 248 Gene3D G3DSA:3.90.230.10 1 248 6.2E-109 T 12-10-2018 N288_02905 36b2d84865f15a6bdc09a5048bab8e7a 264 Gene3D G3DSA:3.40.50.720 2 263 6.2E-61 T 12-10-2018 N288_02905 36b2d84865f15a6bdc09a5048bab8e7a 264 SUPERFAMILY SSF51735 1 260 3.08E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_02905 36b2d84865f15a6bdc09a5048bab8e7a 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 8.9E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_02905 36b2d84865f15a6bdc09a5048bab8e7a 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 8.9E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_02905 36b2d84865f15a6bdc09a5048bab8e7a 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 8.9E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_02905 36b2d84865f15a6bdc09a5048bab8e7a 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.2E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_02905 36b2d84865f15a6bdc09a5048bab8e7a 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.2E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_02905 36b2d84865f15a6bdc09a5048bab8e7a 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 3.2E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_02905 36b2d84865f15a6bdc09a5048bab8e7a 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.2E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_02905 36b2d84865f15a6bdc09a5048bab8e7a 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.2E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_02905 36b2d84865f15a6bdc09a5048bab8e7a 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.2E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_02905 36b2d84865f15a6bdc09a5048bab8e7a 264 Pfam PF00106 short chain dehydrogenase 8 195 6.7E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_14110 b3c73eb19aad2720f509efe9d42b27af 191 SMART SM00855 3 146 5.1E-24 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 N288_14110 b3c73eb19aad2720f509efe9d42b27af 191 Gene3D G3DSA:3.40.50.1240 1 190 8.0E-51 T 12-10-2018 IPR029033 Histidine phosphatase superfamily N288_14110 b3c73eb19aad2720f509efe9d42b27af 191 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 184 2.1E-50 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 N288_14110 b3c73eb19aad2720f509efe9d42b27af 191 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 N288_14110 b3c73eb19aad2720f509efe9d42b27af 191 PIRSF PIRSF000709 2 121 1.6E-8 T 12-10-2018 N288_14110 b3c73eb19aad2720f509efe9d42b27af 191 SUPERFAMILY SSF53254 1 189 7.38E-54 T 12-10-2018 IPR029033 Histidine phosphatase superfamily N288_14665 c29c9e3654b3eca109dfa0d8d85b488b 114 SUPERFAMILY SSF158622 5 113 3.27E-25 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily N288_14665 c29c9e3654b3eca109dfa0d8d85b488b 114 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 10 107 2.5E-19 T 12-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA N288_14665 c29c9e3654b3eca109dfa0d8d85b488b 114 Gene3D G3DSA:1.20.1500.10 1 114 6.3E-25 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily N288_22570 37b03f28d64a733e6d812b5009365d1a 353 SMART SM01130 11 333 4.7E-9 T 12-10-2018 IPR002220 DapA-like GO:0016829 N288_22570 37b03f28d64a733e6d812b5009365d1a 353 Gene3D G3DSA:3.20.20.70 4 331 3.7E-21 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_22570 37b03f28d64a733e6d812b5009365d1a 353 Pfam PF00701 Dihydrodipicolinate synthetase family 15 213 2.6E-8 T 12-10-2018 IPR002220 DapA-like GO:0016829 N288_22570 37b03f28d64a733e6d812b5009365d1a 353 SUPERFAMILY SSF51569 15 332 1.26E-30 T 12-10-2018 N288_08345 b3276d3132a15abcbc441ba2539f44f9 586 Pfam PF13311 Protein of unknown function (DUF4080) 371 551 5.5E-46 T 12-10-2018 IPR025288 Domain of unknown function DUF4080 N288_08345 b3276d3132a15abcbc441ba2539f44f9 586 Gene3D G3DSA:3.40.50.280 17 139 1.9E-12 T 12-10-2018 N288_08345 b3276d3132a15abcbc441ba2539f44f9 586 Pfam PF02310 B12 binding domain 9 122 6.3E-19 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 N288_08345 b3276d3132a15abcbc441ba2539f44f9 586 SMART SM00729 176 379 1.1E-21 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 N288_08345 b3276d3132a15abcbc441ba2539f44f9 586 SUPERFAMILY SSF102114 173 379 3.4E-37 T 12-10-2018 N288_08345 b3276d3132a15abcbc441ba2539f44f9 586 SUPERFAMILY SSF52242 42 149 1.49E-7 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 N288_08345 b3276d3132a15abcbc441ba2539f44f9 586 Gene3D G3DSA:3.80.30.20 174 370 1.7E-18 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe N288_08345 b3276d3132a15abcbc441ba2539f44f9 586 Pfam PF04055 Radical SAM superfamily 180 344 4.0E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 N288_24000 fd1e5b7c3b07ddb931d975252d69f7f2 690 Gene3D G3DSA:1.10.3810.10 55 253 4.0E-73 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_24000 fd1e5b7c3b07ddb931d975252d69f7f2 690 SUPERFAMILY SSF56601 219 662 1.05E-117 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_24000 fd1e5b7c3b07ddb931d975252d69f7f2 690 SUPERFAMILY SSF53955 50 257 2.08E-73 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily N288_24000 fd1e5b7c3b07ddb931d975252d69f7f2 690 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 73 609 1.1E-178 T 12-10-2018 N288_24000 fd1e5b7c3b07ddb931d975252d69f7f2 690 Pfam PF00905 Penicillin binding protein transpeptidase domain 329 585 4.3E-29 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 N288_24000 fd1e5b7c3b07ddb931d975252d69f7f2 690 Gene3D G3DSA:3.40.710.10 261 665 1.6E-116 T 12-10-2018 N288_24000 fd1e5b7c3b07ddb931d975252d69f7f2 690 Pfam PF00912 Transglycosylase 62 237 1.3E-61 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_14155 82dd32fbc4fde7f980328b860c6e29cc 330 SUPERFAMILY SSF51430 13 329 6.29E-94 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily N288_14155 82dd32fbc4fde7f980328b860c6e29cc 330 Gene3D G3DSA:3.20.20.100 15 330 3.0E-117 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily N288_14155 82dd32fbc4fde7f980328b860c6e29cc 330 Pfam PF00248 Aldo/keto reductase family 28 328 2.5E-71 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain N288_24525 df876e8e5bc490fadf658d52554c6a58 104 SUPERFAMILY SSF54909 1 97 1.82E-17 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel N288_24525 df876e8e5bc490fadf658d52554c6a58 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 8 74 2.4E-11 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain N288_24525 df876e8e5bc490fadf658d52554c6a58 104 Gene3D G3DSA:3.30.70.100 1 104 2.0E-18 T 12-10-2018 N288_18175 c59a1a38692ceff25d49ca2ffce6b9b2 216 Pfam PF16258 Domain of unknown function (DUF4912) 79 179 7.2E-16 T 12-10-2018 IPR032585 Protein of unknown function DUF4912 N288_18175 c59a1a38692ceff25d49ca2ffce6b9b2 216 Gene3D G3DSA:1.10.10.60 2 38 2.8E-5 T 12-10-2018 N288_20700 c501ebf02c637b34f25689dbb8a37d78 166 Pfam PF01037 Lrp/AsnC ligand binding domain 73 144 1.9E-15 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain N288_20700 c501ebf02c637b34f25689dbb8a37d78 166 SMART SM00344 3 114 3.2E-5 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 N288_20700 c501ebf02c637b34f25689dbb8a37d78 166 Gene3D G3DSA:3.30.70.920 56 153 9.4E-21 T 12-10-2018 N288_20700 c501ebf02c637b34f25689dbb8a37d78 166 SUPERFAMILY SSF54909 66 147 1.47E-18 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel N288_20700 c501ebf02c637b34f25689dbb8a37d78 166 SUPERFAMILY SSF46785 3 60 1.75E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_20700 c501ebf02c637b34f25689dbb8a37d78 166 Gene3D G3DSA:1.10.10.10 1 54 5.6E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_21650 a7e847f8b0d9584d45e364cb1ad1262b 316 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 307 35.736 T 12-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 N288_21650 a7e847f8b0d9584d45e364cb1ad1262b 316 Gene3D G3DSA:1.10.10.10 215 308 2.3E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_21650 a7e847f8b0d9584d45e364cb1ad1262b 316 Pfam PF14527 WhiA LAGLIDADG-like domain 125 217 1.8E-36 T 12-10-2018 IPR039518 WhiA, LAGLIDADG-like domain N288_21650 a7e847f8b0d9584d45e364cb1ad1262b 316 Pfam PF02650 WhiA C-terminal HTH domain 220 304 2.0E-35 T 12-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal N288_21650 a7e847f8b0d9584d45e364cb1ad1262b 316 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 305 5.9E-131 T 12-10-2018 IPR033981 Sporulation regulator WhiA-like N288_21650 a7e847f8b0d9584d45e364cb1ad1262b 316 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 19 103 5.3E-36 T 12-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain N288_21650 a7e847f8b0d9584d45e364cb1ad1262b 316 Gene3D G3DSA:3.10.28.10 1 214 3.1E-67 T 12-10-2018 IPR027434 Homing endonuclease N288_21650 a7e847f8b0d9584d45e364cb1ad1262b 316 SUPERFAMILY SSF55608 120 221 2.04E-20 T 12-10-2018 IPR027434 Homing endonuclease N288_08400 7c3321665cfb784affdb8708633da7ef 220 Hamap MF_01680 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [mtnX]. 2 216 48.224 T 12-10-2018 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase GO:0016791|GO:0071267 KEGG: 00270+3.1.3.87|MetaCyc: PWY-4361 N288_08400 7c3321665cfb784affdb8708633da7ef 220 TIGRFAM TIGR01489 DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 5 186 7.1E-49 T 12-10-2018 IPR006384 Pyridoxal phosphate phosphatase-related GO:0016791 N288_08400 7c3321665cfb784affdb8708633da7ef 220 Gene3D G3DSA:3.40.50.1000 6 209 1.3E-67 T 12-10-2018 IPR023214 HAD superfamily N288_08400 7c3321665cfb784affdb8708633da7ef 220 Pfam PF12710 haloacid dehalogenase-like hydrolase 6 177 5.7E-20 T 12-10-2018 N288_08400 7c3321665cfb784affdb8708633da7ef 220 TIGRFAM TIGR03333 salvage_mtnX: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase 6 216 1.0E-101 T 12-10-2018 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase GO:0016791|GO:0071267 KEGG: 00270+3.1.3.87|MetaCyc: PWY-4361 N288_08400 7c3321665cfb784affdb8708633da7ef 220 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 178 1.4E-33 T 12-10-2018 N288_08400 7c3321665cfb784affdb8708633da7ef 220 SUPERFAMILY SSF56784 2 217 6.51E-52 T 12-10-2018 IPR036412 HAD-like superfamily N288_08400 7c3321665cfb784affdb8708633da7ef 220 Gene3D G3DSA:3.90.1470.20 15 134 1.3E-67 T 12-10-2018 N288_04695 3a20f694111f59d1a456e5ece094e2dc 179 SUPERFAMILY SSF88946 11 85 4.71E-18 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_04695 3a20f694111f59d1a456e5ece094e2dc 179 Pfam PF08281 Sigma-70, region 4 112 162 9.6E-14 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_04695 3a20f694111f59d1a456e5ece094e2dc 179 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 36 67 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_04695 3a20f694111f59d1a456e5ece094e2dc 179 Pfam PF04542 Sigma-70 region 2 14 80 3.2E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_04695 3a20f694111f59d1a456e5ece094e2dc 179 Gene3D G3DSA:1.10.1740.10 2 77 9.6E-20 T 12-10-2018 N288_04695 3a20f694111f59d1a456e5ece094e2dc 179 Gene3D G3DSA:1.10.10.10 103 169 1.6E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_04695 3a20f694111f59d1a456e5ece094e2dc 179 SUPERFAMILY SSF88659 100 167 1.63E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_04695 3a20f694111f59d1a456e5ece094e2dc 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 166 4.9E-28 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_00280 5521ef99ee929d6516acaf87fb0c9070 293 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 20 288 57.093 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 N288_00280 5521ef99ee929d6516acaf87fb0c9070 293 SMART SM00650 36 212 3.0E-87 T 12-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 N288_00280 5521ef99ee929d6516acaf87fb0c9070 293 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 52 79 - T 12-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 N288_00280 5521ef99ee929d6516acaf87fb0c9070 293 SUPERFAMILY SSF53335 17 289 1.02E-75 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_00280 5521ef99ee929d6516acaf87fb0c9070 293 Pfam PF00398 Ribosomal RNA adenine dimethylase 20 255 1.1E-78 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm N288_00280 5521ef99ee929d6516acaf87fb0c9070 293 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 20 286 1.4E-86 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 N288_00280 5521ef99ee929d6516acaf87fb0c9070 293 Gene3D G3DSA:3.40.50.150 2 216 1.1E-74 T 12-10-2018 N288_00280 5521ef99ee929d6516acaf87fb0c9070 293 Gene3D G3DSA:1.10.8.100 220 289 1.6E-20 T 12-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 N288_22030 99df31ce1aad3c68d466be2f7de7b1e7 77 Gene3D G3DSA:3.30.70.1680 1 63 5.3E-29 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 N288_22030 99df31ce1aad3c68d466be2f7de7b1e7 77 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 7.0E-16 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 N288_22030 99df31ce1aad3c68d466be2f7de7b1e7 77 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 68 17.91 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 N288_22030 99df31ce1aad3c68d466be2f7de7b1e7 77 SUPERFAMILY SSF117130 1 55 6.67E-21 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 N288_22030 99df31ce1aad3c68d466be2f7de7b1e7 77 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 67 6.6E-30 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 N288_22030 99df31ce1aad3c68d466be2f7de7b1e7 77 Pfam PF02599 Global regulator protein family 1 53 7.8E-27 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 N288_07105 9c6bc52fd210f712508c518e64c2938d 660 Gene3D G3DSA:2.120.10.30 155 297 5.7E-19 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like N288_07105 9c6bc52fd210f712508c518e64c2938d 660 Gene3D G3DSA:2.120.10.30 3 150 1.1E-27 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like N288_07105 9c6bc52fd210f712508c518e64c2938d 660 Pfam PF00326 Prolyl oligopeptidase family 451 660 5.3E-56 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 N288_07105 9c6bc52fd210f712508c518e64c2938d 660 SUPERFAMILY SSF53474 406 660 3.95E-73 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_07105 9c6bc52fd210f712508c518e64c2938d 660 Gene3D G3DSA:3.40.50.1820 407 660 4.1E-76 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_07105 9c6bc52fd210f712508c518e64c2938d 660 SUPERFAMILY SSF82171 13 398 6.15E-45 T 12-10-2018 N288_07105 9c6bc52fd210f712508c518e64c2938d 660 Pfam PF07676 WD40-like Beta Propeller Repeat 235 256 0.041 T 12-10-2018 IPR011659 WD40-like Beta Propeller N288_07105 9c6bc52fd210f712508c518e64c2938d 660 Pfam PF07676 WD40-like Beta Propeller Repeat 112 127 2.5E-4 T 12-10-2018 IPR011659 WD40-like Beta Propeller N288_07105 9c6bc52fd210f712508c518e64c2938d 660 Pfam PF07676 WD40-like Beta Propeller Repeat 186 215 0.09 T 12-10-2018 IPR011659 WD40-like Beta Propeller N288_07105 9c6bc52fd210f712508c518e64c2938d 660 Pfam PF07676 WD40-like Beta Propeller Repeat 62 93 2.2E-7 T 12-10-2018 IPR011659 WD40-like Beta Propeller N288_19785 354723780c5ae31e32bd3e5faf5cdf51 335 SUPERFAMILY SSF52096 54 268 6.46E-43 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_19785 354723780c5ae31e32bd3e5faf5cdf51 335 Gene3D G3DSA:3.90.226.10 62 276 7.3E-87 T 12-10-2018 N288_19785 354723780c5ae31e32bd3e5faf5cdf51 335 Pfam PF01343 Peptidase family S49 131 282 3.7E-57 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 N288_19785 354723780c5ae31e32bd3e5faf5cdf51 335 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 60 281 2.6E-83 T 12-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 N288_19785 354723780c5ae31e32bd3e5faf5cdf51 335 Gene3D G3DSA:3.40.1750.20 172 238 7.3E-87 T 12-10-2018 N288_21490 39f080944f9be76d0a7321a0314555e1 565 SUPERFAMILY SSF58104 233 564 7.46E-75 T 12-10-2018 N288_21490 39f080944f9be76d0a7321a0314555e1 565 Pfam PF00672 HAMP domain 209 257 6.0E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_21490 39f080944f9be76d0a7321a0314555e1 565 SMART SM00304 207 260 1.2E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_21490 39f080944f9be76d0a7321a0314555e1 565 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 514 2.0E-48 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_21490 39f080944f9be76d0a7321a0314555e1 565 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 131 1.8E-12 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain N288_21490 39f080944f9be76d0a7321a0314555e1 565 SMART SM00283 289 564 5.6E-83 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_21490 39f080944f9be76d0a7321a0314555e1 565 Gene3D G3DSA:1.10.287.950 305 564 2.4E-70 T 12-10-2018 N288_21490 39f080944f9be76d0a7321a0314555e1 565 Gene3D G3DSA:1.20.1480.50 167 265 8.7E-16 T 12-10-2018 N288_25575 ff09261e1af197288087f68ecbd802b6 456 Pfam PF00324 Amino acid permease 14 445 9.7E-110 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 N288_25575 ff09261e1af197288087f68ecbd802b6 456 PIRSF PIRSF006060 1 455 3.1E-65 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 N288_25575 ff09261e1af197288087f68ecbd802b6 456 Gene3D G3DSA:1.20.1740.10 5 454 7.3E-60 T 12-10-2018 N288_25575 ff09261e1af197288087f68ecbd802b6 456 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 N288_17030 a306ed5b5bfa9de85486429d1016e332 257 PRINTS PR00996 Glutamate methyltransferase family signature 215 238 2.2E-40 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_17030 a306ed5b5bfa9de85486429d1016e332 257 PRINTS PR00996 Glutamate methyltransferase family signature 61 73 2.2E-40 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_17030 a306ed5b5bfa9de85486429d1016e332 257 PRINTS PR00996 Glutamate methyltransferase family signature 24 37 2.2E-40 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_17030 a306ed5b5bfa9de85486429d1016e332 257 PRINTS PR00996 Glutamate methyltransferase family signature 98 118 2.2E-40 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_17030 a306ed5b5bfa9de85486429d1016e332 257 PRINTS PR00996 Glutamate methyltransferase family signature 130 146 2.2E-40 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_17030 a306ed5b5bfa9de85486429d1016e332 257 PRINTS PR00996 Glutamate methyltransferase family signature 196 210 2.2E-40 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_17030 a306ed5b5bfa9de85486429d1016e332 257 Pfam PF01739 CheR methyltransferase, SAM binding domain 68 239 3.1E-57 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal N288_17030 a306ed5b5bfa9de85486429d1016e332 257 Gene3D G3DSA:3.40.50.150 67 257 1.8E-64 T 12-10-2018 N288_17030 a306ed5b5bfa9de85486429d1016e332 257 SUPERFAMILY SSF53335 68 239 8.52E-51 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_17030 a306ed5b5bfa9de85486429d1016e332 257 SMART SM00138 2 255 2.6E-104 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_17030 a306ed5b5bfa9de85486429d1016e332 257 SUPERFAMILY SSF47757 3 67 8.37E-13 T 12-10-2018 N288_17030 a306ed5b5bfa9de85486429d1016e332 257 Pfam PF03705 CheR methyltransferase, all-alpha domain 4 54 2.3E-13 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal N288_24520 19c409a892ad67fb54330c5f52aee512 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 1.6E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_24520 19c409a892ad67fb54330c5f52aee512 201 SUPERFAMILY SSF46689 4 71 9.75E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_24520 19c409a892ad67fb54330c5f52aee512 201 Gene3D G3DSA:1.10.357.10 55 193 1.2E-12 T 12-10-2018 N288_24520 19c409a892ad67fb54330c5f52aee512 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 2.0E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_24520 19c409a892ad67fb54330c5f52aee512 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 2.0E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_24520 19c409a892ad67fb54330c5f52aee512 201 SUPERFAMILY SSF48498 82 195 1.44E-8 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily N288_24520 19c409a892ad67fb54330c5f52aee512 201 Gene3D G3DSA:1.10.10.60 6 54 1.9E-15 T 12-10-2018 N288_03665 ea08614f1af9bdfa04575c242d274a01 300 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 264 295 7.5E-5 T 12-10-2018 N288_03665 ea08614f1af9bdfa04575c242d274a01 300 Pfam PF00746 LPXTG cell wall anchor motif 264 295 2.7E-5 T 12-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor N288_21735 e809bbe5960ea1ad40464d5ec4fcef76 272 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 2 264 8.5E-92 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 N288_21735 e809bbe5960ea1ad40464d5ec4fcef76 272 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 136 148 - T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 N288_21735 e809bbe5960ea1ad40464d5ec4fcef76 272 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 10 255 6.7E-83 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 N288_21735 e809bbe5960ea1ad40464d5ec4fcef76 272 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 7 261 18.615 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 N288_13910 ce7d00c3d073e54460e6a9d98901a34e 254 Gene3D G3DSA:1.10.1660.10 1 117 6.0E-24 T 12-10-2018 N288_13910 ce7d00c3d073e54460e6a9d98901a34e 254 SMART SM00422 3 72 5.9E-20 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_13910 ce7d00c3d073e54460e6a9d98901a34e 254 SUPERFAMILY SSF46955 3 109 1.21E-23 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily N288_13910 ce7d00c3d073e54460e6a9d98901a34e 254 Pfam PF13411 MerR HTH family regulatory protein 3 71 3.5E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_03910 f6bf61d46df70506d4d3a7c5f3b83390 266 SUPERFAMILY SSF88713 52 254 6.88E-67 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 N288_03910 f6bf61d46df70506d4d3a7c5f3b83390 266 TIGRFAM TIGR02884 spore_pdaA: delta-lactam-biosynthetic de-N-acetylase 32 254 3.3E-108 T 12-10-2018 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA N288_03910 f6bf61d46df70506d4d3a7c5f3b83390 266 Gene3D G3DSA:3.20.20.370 17 258 6.3E-85 T 12-10-2018 N288_03910 f6bf61d46df70506d4d3a7c5f3b83390 266 Pfam PF01522 Polysaccharide deacetylase 63 185 4.1E-33 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 N288_06285 dae8b6911ce05ee493bb8b79f06e2f94 453 Gene3D G3DSA:3.50.50.60 4 360 1.7E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_06285 dae8b6911ce05ee493bb8b79f06e2f94 453 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 13 327 4.6E-14 T 12-10-2018 N288_06285 dae8b6911ce05ee493bb8b79f06e2f94 453 SUPERFAMILY SSF51905 10 325 4.05E-20 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_06285 dae8b6911ce05ee493bb8b79f06e2f94 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 201 219 1.1E-8 T 12-10-2018 N288_06285 dae8b6911ce05ee493bb8b79f06e2f94 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.1E-8 T 12-10-2018 N288_06285 dae8b6911ce05ee493bb8b79f06e2f94 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 304 320 1.1E-8 T 12-10-2018 N288_18475 962287f1735a53dc18348a8e76170a1c 312 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 311 1.6E-109 T 12-10-2018 N288_18475 962287f1735a53dc18348a8e76170a1c 312 SUPERFAMILY SSF53335 79 309 7.84E-47 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_18475 962287f1735a53dc18348a8e76170a1c 312 PIRSF PIRSF000401 1 312 1.3E-112 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 N288_18475 962287f1735a53dc18348a8e76170a1c 312 Gene3D G3DSA:3.40.50.150 116 312 5.2E-63 T 12-10-2018 N288_18475 962287f1735a53dc18348a8e76170a1c 312 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 305 6.1E-107 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 N288_18475 962287f1735a53dc18348a8e76170a1c 312 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 311 36.814 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 N288_10385 adc28b32e60bdff601dcdf73fe1e2bd2 599 Pfam PF00005 ABC transporter 366 515 2.9E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_10385 adc28b32e60bdff601dcdf73fe1e2bd2 599 Gene3D G3DSA:3.40.50.300 347 597 2.1E-88 T 12-10-2018 N288_10385 adc28b32e60bdff601dcdf73fe1e2bd2 599 Pfam PF00664 ABC transporter transmembrane region 31 304 2.1E-44 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 N288_10385 adc28b32e60bdff601dcdf73fe1e2bd2 599 Gene3D G3DSA:1.20.1560.10 1 335 3.2E-85 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_10385 adc28b32e60bdff601dcdf73fe1e2bd2 599 SMART SM00382 375 567 1.4E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_10385 adc28b32e60bdff601dcdf73fe1e2bd2 599 SUPERFAMILY SSF52540 344 585 1.74E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_10385 adc28b32e60bdff601dcdf73fe1e2bd2 599 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_10385 adc28b32e60bdff601dcdf73fe1e2bd2 599 SUPERFAMILY SSF90123 14 333 1.22E-75 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_06105 83bd40c3791a5d75ced0caecf347fc72 547 Gene3D G3DSA:3.40.630.10 11 238 4.5E-28 T 12-10-2018 N288_06105 83bd40c3791a5d75ced0caecf347fc72 547 SUPERFAMILY SSF53187 11 240 1.97E-28 T 12-10-2018 N288_06105 83bd40c3791a5d75ced0caecf347fc72 547 PIRSF PIRSF010386 5 547 1.6E-172 T 12-10-2018 IPR012166 Uncharacterised protein family RocB N288_06105 83bd40c3791a5d75ced0caecf347fc72 547 Pfam PF01546 Peptidase family M20/M25/M40 130 193 5.8E-8 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_06275 515967555310c35fddf332c005d16052 376 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 130 139 7.9E-13 T 12-10-2018 N288_06275 515967555310c35fddf332c005d16052 376 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 7.9E-13 T 12-10-2018 N288_06275 515967555310c35fddf332c005d16052 376 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 7.9E-13 T 12-10-2018 N288_06275 515967555310c35fddf332c005d16052 376 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 127 145 1.9E-11 T 12-10-2018 N288_06275 515967555310c35fddf332c005d16052 376 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.9E-11 T 12-10-2018 N288_06275 515967555310c35fddf332c005d16052 376 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 1.9E-11 T 12-10-2018 N288_06275 515967555310c35fddf332c005d16052 376 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 318 340 1.9E-11 T 12-10-2018 N288_06275 515967555310c35fddf332c005d16052 376 SUPERFAMILY SSF51905 1 345 2.96E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_06275 515967555310c35fddf332c005d16052 376 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 2 210 1.2E-20 T 12-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase N288_06275 515967555310c35fddf332c005d16052 376 Gene3D G3DSA:3.50.50.60 1 374 2.0E-32 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_03130 bbcb54d1b014d581a7b4c9319315adff 383 SUPERFAMILY SSF51905 5 371 2.04E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_03130 bbcb54d1b014d581a7b4c9319315adff 383 Pfam PF01266 FAD dependent oxidoreductase 6 351 9.6E-71 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 N288_03130 bbcb54d1b014d581a7b4c9319315adff 383 Gene3D G3DSA:3.50.50.60 6 353 1.0E-110 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_03130 bbcb54d1b014d581a7b4c9319315adff 383 SUPERFAMILY SSF54373 225 312 1.57E-16 T 12-10-2018 N288_03130 bbcb54d1b014d581a7b4c9319315adff 383 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 7 356 2.2E-94 T 12-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 N288_03130 bbcb54d1b014d581a7b4c9319315adff 383 Gene3D G3DSA:3.30.9.10 92 312 1.0E-110 T 12-10-2018 N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 SUPERFAMILY SSF55874 576 759 1.07E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 Gene3D G3DSA:3.30.450.40 260 463 1.1E-15 T 12-10-2018 IPR029016 GAF-like domain superfamily N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 SMART SM00448 810 924 1.2E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 Pfam PF00072 Response regulator receiver domain 812 923 1.6E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 SUPERFAMILY SSF47384 506 588 4.51E-22 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 Pfam PF00512 His Kinase A (phospho-acceptor) domain 520 587 3.8E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 SMART SM00387 634 759 1.2E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 Pfam PF13185 GAF domain 291 427 7.9E-13 T 12-10-2018 IPR003018 GAF domain GO:0005515 N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 719 737 1.5E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 702 712 1.5E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 698 1.5E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 743 756 1.5E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 Gene3D G3DSA:3.40.50.12740 809 932 1.5E-42 T 12-10-2018 N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 Gene3D G3DSA:1.10.287.130 483 585 4.1E-26 T 12-10-2018 N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 SUPERFAMILY SSF52172 807 928 5.41E-38 T 12-10-2018 IPR011006 CheY-like superfamily N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 SUPERFAMILY SSF55781 272 456 1.33E-21 T 12-10-2018 N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 SMART SM00065 291 437 0.0018 T 12-10-2018 IPR003018 GAF domain GO:0005515 N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 634 756 4.1E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 172 8.4E-13 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 Gene3D G3DSA:3.30.565.10 586 758 5.8E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_15785 a8418e658dc357e8a8abbc3bdde0f04c 933 SMART SM00388 519 587 2.2E-24 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_04250 32e1bf530afb62be810f0e9e6395792c 417 SMART SM00387 309 416 3.9E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_04250 32e1bf530afb62be810f0e9e6395792c 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 361 9.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_04250 32e1bf530afb62be810f0e9e6395792c 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 394 9.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_04250 32e1bf530afb62be810f0e9e6395792c 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 413 9.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_04250 32e1bf530afb62be810f0e9e6395792c 417 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 310 413 3.8E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_04250 32e1bf530afb62be810f0e9e6395792c 417 SUPERFAMILY SSF55874 257 413 4.45E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_04250 32e1bf530afb62be810f0e9e6395792c 417 SUPERFAMILY SSF47384 196 267 4.51E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_04250 32e1bf530afb62be810f0e9e6395792c 417 Pfam PF07694 5TMR of 5TMR-LYT 21 168 6.1E-9 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 N288_04250 32e1bf530afb62be810f0e9e6395792c 417 Gene3D G3DSA:1.10.287.130 210 265 7.0E-55 T 12-10-2018 N288_04250 32e1bf530afb62be810f0e9e6395792c 417 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 265 9.5E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_04250 32e1bf530afb62be810f0e9e6395792c 417 SMART SM00388 203 268 4.6E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_04250 32e1bf530afb62be810f0e9e6395792c 417 Gene3D G3DSA:3.30.565.10 266 413 7.0E-55 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_04775 c6039f3f68bb89db359355934eecd9b1 286 Gene3D G3DSA:3.90.1200.10 95 246 4.1E-6 T 12-10-2018 N288_04775 c6039f3f68bb89db359355934eecd9b1 286 Pfam PF01636 Phosphotransferase enzyme family 128 217 3.0E-5 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase N288_04775 c6039f3f68bb89db359355934eecd9b1 286 SUPERFAMILY SSF56112 16 228 6.85E-13 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_23435 6fa810caea9d954eb60a3d773d7a7c84 640 Gene3D G3DSA:3.30.70.80 31 96 5.1E-9 T 12-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 N288_23435 6fa810caea9d954eb60a3d773d7a7c84 640 SUPERFAMILY SSF52743 103 380 1.31E-84 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 N288_23435 6fa810caea9d954eb60a3d773d7a7c84 640 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 169 179 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site N288_23435 6fa810caea9d954eb60a3d773d7a7c84 640 SUPERFAMILY SSF54897 39 98 1.62E-6 T 12-10-2018 N288_23435 6fa810caea9d954eb60a3d773d7a7c84 640 Pfam PF00395 S-layer homology domain 526 569 2.4E-14 T 12-10-2018 IPR001119 S-layer homology domain N288_23435 6fa810caea9d954eb60a3d773d7a7c84 640 Pfam PF00395 S-layer homology domain 467 508 8.0E-9 T 12-10-2018 IPR001119 S-layer homology domain N288_23435 6fa810caea9d954eb60a3d773d7a7c84 640 Pfam PF00395 S-layer homology domain 585 624 2.6E-6 T 12-10-2018 IPR001119 S-layer homology domain N288_23435 6fa810caea9d954eb60a3d773d7a7c84 640 Pfam PF00082 Subtilase family 123 373 1.1E-56 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 N288_23435 6fa810caea9d954eb60a3d773d7a7c84 640 Gene3D G3DSA:3.40.50.200 97 383 1.0E-86 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 N288_23435 6fa810caea9d954eb60a3d773d7a7c84 640 PRINTS PR00723 Subtilisin serine protease family (S8) signature 165 178 3.6E-16 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_23435 6fa810caea9d954eb60a3d773d7a7c84 640 PRINTS PR00723 Subtilisin serine protease family (S8) signature 322 338 3.6E-16 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_23435 6fa810caea9d954eb60a3d773d7a7c84 640 PRINTS PR00723 Subtilisin serine protease family (S8) signature 123 142 3.6E-16 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_23435 6fa810caea9d954eb60a3d773d7a7c84 640 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 323 333 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site N288_04980 7ba37aa3562239649082f7f737362f39 291 Gene3D G3DSA:1.20.120.330 148 289 7.1E-17 T 12-10-2018 N288_04980 7ba37aa3562239649082f7f737362f39 291 Pfam PF04439 Streptomycin adenylyltransferase 7 273 4.9E-46 T 12-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase N288_04980 7ba37aa3562239649082f7f737362f39 291 SUPERFAMILY SSF81631 143 285 6.51E-36 T 12-10-2018 N288_04980 7ba37aa3562239649082f7f737362f39 291 Gene3D G3DSA:3.30.460.10 4 145 1.1E-31 T 12-10-2018 N288_04980 7ba37aa3562239649082f7f737362f39 291 SUPERFAMILY SSF81301 5 135 1.09E-28 T 12-10-2018 N288_10530 566b36e3450fdb36dde3240f1d6fef08 246 Gene3D G3DSA:3.40.1410.10 80 241 6.3E-23 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily N288_10530 566b36e3450fdb36dde3240f1d6fef08 246 SUPERFAMILY SSF46785 10 88 3.32E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_10530 566b36e3450fdb36dde3240f1d6fef08 246 SMART SM00345 17 76 3.7E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_10530 566b36e3450fdb36dde3240f1d6fef08 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 1.8E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_10530 566b36e3450fdb36dde3240f1d6fef08 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.2E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_10530 566b36e3450fdb36dde3240f1d6fef08 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.2E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_10530 566b36e3450fdb36dde3240f1d6fef08 246 SMART SM00866 97 236 3.4E-10 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 N288_10530 566b36e3450fdb36dde3240f1d6fef08 246 Gene3D G3DSA:1.10.10.10 9 77 1.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_10530 566b36e3450fdb36dde3240f1d6fef08 246 Pfam PF07702 UTRA domain 100 235 2.7E-16 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 N288_10530 566b36e3450fdb36dde3240f1d6fef08 246 SUPERFAMILY SSF64288 64 239 9.58E-28 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily N288_01950 7e742a2e4f78376170b165a1c95913fd 185 Pfam PF13302 Acetyltransferase (GNAT) domain 9 147 3.4E-20 T 12-10-2018 IPR000182 GNAT domain N288_01950 7e742a2e4f78376170b165a1c95913fd 185 Gene3D G3DSA:3.40.630.30 2 179 5.7E-43 T 12-10-2018 N288_01950 7e742a2e4f78376170b165a1c95913fd 185 SUPERFAMILY SSF55729 4 172 8.83E-41 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_07815 29466fd04c5c74c203f0b1cdf3533672 538 SUPERFAMILY SSF56801 15 533 4.84E-155 T 12-10-2018 N288_07815 29466fd04c5c74c203f0b1cdf3533672 538 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 12-10-2018 IPR020845 AMP-binding, conserved site N288_07815 29466fd04c5c74c203f0b1cdf3533672 538 Gene3D G3DSA:3.30.300.310 435 536 4.0E-35 T 12-10-2018 N288_07815 29466fd04c5c74c203f0b1cdf3533672 538 Pfam PF00501 AMP-binding enzyme 30 439 8.2E-106 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 N288_07815 29466fd04c5c74c203f0b1cdf3533672 538 Pfam PF13193 AMP-binding enzyme C-terminal domain 449 523 1.7E-20 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain N288_07815 29466fd04c5c74c203f0b1cdf3533672 538 Gene3D G3DSA:3.40.50.980 46 353 1.7E-125 T 12-10-2018 N288_07815 29466fd04c5c74c203f0b1cdf3533672 538 Gene3D G3DSA:2.30.38.10 354 432 1.7E-125 T 12-10-2018 N288_07815 29466fd04c5c74c203f0b1cdf3533672 538 Gene3D G3DSA:3.40.50.980 51 205 1.7E-125 T 12-10-2018 N288_16460 7e554a52e629281ade70efee2ee026a0 214 Gene3D G3DSA:1.10.472.50 1 99 2.3E-28 T 12-10-2018 N288_16460 7e554a52e629281ade70efee2ee026a0 214 Gene3D G3DSA:1.20.58.1910 101 214 1.7E-47 T 12-10-2018 N288_16460 7e554a52e629281ade70efee2ee026a0 214 SMART SM00471 20 135 3.9E-8 T 12-10-2018 IPR003607 HD/PDEase domain N288_16460 7e554a52e629281ade70efee2ee026a0 214 Pfam PF01966 HD domain 26 125 6.6E-7 T 12-10-2018 IPR006674 HD domain N288_16460 7e554a52e629281ade70efee2ee026a0 214 SUPERFAMILY SSF109604 2 213 6.28E-67 T 12-10-2018 N288_07675 eb7bfa829fc82ba784fa9ca15f96721d 414 PIRSF PIRSF007487 1 388 7.1E-81 T 12-10-2018 IPR021176 Competence-induced protein CoiA N288_07675 eb7bfa829fc82ba784fa9ca15f96721d 414 Pfam PF06054 Competence protein CoiA-like family 1 245 6.2E-59 T 12-10-2018 IPR010330 Competence-induced protein CoiA-like N288_05775 245129457d9003f3b8770cfb35dd895e 183 Gene3D G3DSA:1.20.1200.10 12 183 4.5E-57 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 N288_05775 245129457d9003f3b8770cfb35dd895e 183 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 177 8.9E-53 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 N288_05775 245129457d9003f3b8770cfb35dd895e 183 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 173 8.0E-41 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 N288_05775 245129457d9003f3b8770cfb35dd895e 183 SUPERFAMILY SSF89028 2 176 2.94E-56 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 N288_05775 245129457d9003f3b8770cfb35dd895e 183 Pfam PF01923 Cobalamin adenosyltransferase 3 168 2.0E-58 T 12-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 N288_22295 1c06c96aef51a6a3a43096cac6f47067 3826 SMART SM00060 488 578 8.9E-4 T 12-10-2018 IPR003961 Fibronectin type III GO:0005515 N288_22295 1c06c96aef51a6a3a43096cac6f47067 3826 SUPERFAMILY SSF49265 487 578 4.43E-7 T 12-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 N288_22295 1c06c96aef51a6a3a43096cac6f47067 3826 Pfam PF00395 S-layer homology domain 91 132 3.5E-8 T 12-10-2018 IPR001119 S-layer homology domain N288_22295 1c06c96aef51a6a3a43096cac6f47067 3826 Pfam PF00395 S-layer homology domain 149 192 8.0E-7 T 12-10-2018 IPR001119 S-layer homology domain N288_22295 1c06c96aef51a6a3a43096cac6f47067 3826 Pfam PF00395 S-layer homology domain 31 73 5.5E-9 T 12-10-2018 IPR001119 S-layer homology domain N288_22295 1c06c96aef51a6a3a43096cac6f47067 3826 Gene3D G3DSA:2.60.40.10 490 599 3.7E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_03710 a5431adf5c2385269e8178fcb08beea4 439 Gene3D G3DSA:3.30.9.50 74 268 2.9E-54 T 12-10-2018 N288_03710 a5431adf5c2385269e8178fcb08beea4 439 Gene3D G3DSA:3.50.50.60 7 335 2.9E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_03710 a5431adf5c2385269e8178fcb08beea4 439 Pfam PF01494 FAD binding domain 4 346 1.4E-40 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 N288_03710 a5431adf5c2385269e8178fcb08beea4 439 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 9.6E-21 T 12-10-2018 N288_03710 a5431adf5c2385269e8178fcb08beea4 439 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 9.6E-21 T 12-10-2018 N288_03710 a5431adf5c2385269e8178fcb08beea4 439 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 9.6E-21 T 12-10-2018 N288_03710 a5431adf5c2385269e8178fcb08beea4 439 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 9.6E-21 T 12-10-2018 N288_03710 a5431adf5c2385269e8178fcb08beea4 439 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 331 347 9.6E-21 T 12-10-2018 N288_03710 a5431adf5c2385269e8178fcb08beea4 439 SUPERFAMILY SSF51905 5 373 1.51E-47 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_21620 39a3f76a35e85f6a519057e6837b4f2c 443 Pfam PF04963 Sigma-54 factor, core binding domain 81 268 2.0E-49 T 12-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 N288_21620 39a3f76a35e85f6a519057e6837b4f2c 443 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 50 1.3E-12 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 N288_21620 39a3f76a35e85f6a519057e6837b4f2c 443 PRINTS PR00045 Sigma-54 factor signature 341 353 1.6E-24 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 N288_21620 39a3f76a35e85f6a519057e6837b4f2c 443 PRINTS PR00045 Sigma-54 factor signature 357 368 1.6E-24 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 N288_21620 39a3f76a35e85f6a519057e6837b4f2c 443 PRINTS PR00045 Sigma-54 factor signature 416 434 1.6E-24 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 N288_21620 39a3f76a35e85f6a519057e6837b4f2c 443 PRINTS PR00045 Sigma-54 factor signature 154 171 1.6E-24 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 N288_21620 39a3f76a35e85f6a519057e6837b4f2c 443 PIRSF PIRSF000774 1 443 3.3E-134 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 N288_21620 39a3f76a35e85f6a519057e6837b4f2c 443 Gene3D G3DSA:1.10.10.60 381 440 2.1E-21 T 12-10-2018 N288_21620 39a3f76a35e85f6a519057e6837b4f2c 443 Pfam PF04552 Sigma-54, DNA binding domain 282 441 5.3E-62 T 12-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding N288_21620 39a3f76a35e85f6a519057e6837b4f2c 443 Gene3D G3DSA:1.10.10.1330 87 203 1.9E-23 T 12-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily N288_21620 39a3f76a35e85f6a519057e6837b4f2c 443 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 440 2.5E-134 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 N288_21620 39a3f76a35e85f6a519057e6837b4f2c 443 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 329 348 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 N288_21620 39a3f76a35e85f6a519057e6837b4f2c 443 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 421 428 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 N288_15095 dacb00fba81ff737ebb88a77265a2431 215 Gene3D G3DSA:3.40.50.300 2 150 2.6E-36 T 12-10-2018 N288_15095 dacb00fba81ff737ebb88a77265a2431 215 SUPERFAMILY SSF52540 15 141 1.63E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_15095 dacb00fba81ff737ebb88a77265a2431 215 Pfam PF00005 ABC transporter 17 74 5.6E-11 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_14650 0c69d175395ccf80d8a38b1e85b0c5a9 336 SUPERFAMILY SSF51735 1 310 3.48E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_14650 0c69d175395ccf80d8a38b1e85b0c5a9 336 Gene3D G3DSA:3.40.50.720 1 315 1.7E-42 T 12-10-2018 N288_14650 0c69d175395ccf80d8a38b1e85b0c5a9 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 236 3.4E-14 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 N288_14855 7183a21f66fb015e9107356125aeaf73 94 Pfam PF14166 YueH-like protein 16 90 6.7E-25 T 12-10-2018 IPR020260 Uncharacterised protein family YueH N288_00690 25f2c42124b198c07bbe08a05503508c 121 SUPERFAMILY SSF48300 1 57 1.44E-18 T 12-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00690 25f2c42124b198c07bbe08a05503508c 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 95 6.0E-14 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00690 25f2c42124b198c07bbe08a05503508c 121 Gene3D G3DSA:3.30.1390.10 52 121 1.3E-31 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like N288_00690 25f2c42124b198c07bbe08a05503508c 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 121 25.582 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00690 25f2c42124b198c07bbe08a05503508c 121 SUPERFAMILY SSF54736 51 121 1.73E-25 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like N288_00690 25f2c42124b198c07bbe08a05503508c 121 Gene3D G3DSA:1.20.5.710 1 51 2.2E-22 T 12-10-2018 N288_00690 25f2c42124b198c07bbe08a05503508c 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 2 48 5.8E-22 T 12-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00690 25f2c42124b198c07bbe08a05503508c 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 1.2E-31 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00690 25f2c42124b198c07bbe08a05503508c 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 2 121 3.6E-52 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_23275 07fe43888daa9aa73c85ff637a93a231 376 Gene3D G3DSA:3.40.640.10 1 250 6.2E-81 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_23275 07fe43888daa9aa73c85ff637a93a231 376 PIRSF PIRSF000390 2 376 2.1E-87 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase N288_23275 07fe43888daa9aa73c85ff637a93a231 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 370 2.6E-98 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase N288_23275 07fe43888daa9aa73c85ff637a93a231 376 Gene3D G3DSA:3.90.1150.10 258 375 6.5E-31 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_23275 07fe43888daa9aa73c85ff637a93a231 376 SUPERFAMILY SSF53383 8 375 1.97E-97 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_24025 b5c6e79e6c864ec515eb14b7aff4ac47 432 SMART SM00471 57 187 5.2E-11 T 12-10-2018 IPR003607 HD/PDEase domain N288_24025 b5c6e79e6c864ec515eb14b7aff4ac47 432 SUPERFAMILY SSF109604 6 411 2.27E-120 T 12-10-2018 N288_24025 b5c6e79e6c864ec515eb14b7aff4ac47 432 Gene3D G3DSA:1.10.3210.10 11 401 1.6E-166 T 12-10-2018 N288_24025 b5c6e79e6c864ec515eb14b7aff4ac47 432 Pfam PF01966 HD domain 61 181 3.2E-15 T 12-10-2018 IPR006674 HD domain N288_24025 b5c6e79e6c864ec515eb14b7aff4ac47 432 Gene3D G3DSA:1.20.1250.30 235 412 1.6E-166 T 12-10-2018 N288_20970 c04d0764c5816d81af7d25178c6b1f67 305 Pfam PF08544 GHMP kinases C terminal 203 278 7.5E-10 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain N288_20970 c04d0764c5816d81af7d25178c6b1f67 305 TIGRFAM TIGR00191 thrB: homoserine kinase 7 294 7.1E-75 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 N288_20970 c04d0764c5816d81af7d25178c6b1f67 305 SUPERFAMILY SSF54211 5 153 2.66E-30 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_20970 c04d0764c5816d81af7d25178c6b1f67 305 PRINTS PR00958 Homoserine kinase signature 130 143 2.3E-34 T 12-10-2018 N288_20970 c04d0764c5816d81af7d25178c6b1f67 305 PRINTS PR00958 Homoserine kinase signature 14 29 2.3E-34 T 12-10-2018 N288_20970 c04d0764c5816d81af7d25178c6b1f67 305 PRINTS PR00958 Homoserine kinase signature 168 185 2.3E-34 T 12-10-2018 N288_20970 c04d0764c5816d81af7d25178c6b1f67 305 PRINTS PR00958 Homoserine kinase signature 96 111 2.3E-34 T 12-10-2018 N288_20970 c04d0764c5816d81af7d25178c6b1f67 305 PRINTS PR00958 Homoserine kinase signature 248 263 2.3E-34 T 12-10-2018 N288_20970 c04d0764c5816d81af7d25178c6b1f67 305 PIRSF PIRSF000676 3 300 3.2E-83 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 N288_20970 c04d0764c5816d81af7d25178c6b1f67 305 Hamap MF_00384 Homoserine kinase [thrB]. 9 298 28.905 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 N288_20970 c04d0764c5816d81af7d25178c6b1f67 305 Gene3D G3DSA:3.30.230.10 5 162 4.3E-44 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup N288_20970 c04d0764c5816d81af7d25178c6b1f67 305 Pfam PF00288 GHMP kinases N terminal domain 84 143 1.3E-11 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 N288_20970 c04d0764c5816d81af7d25178c6b1f67 305 SUPERFAMILY SSF55060 164 283 6.24E-29 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily N288_20970 c04d0764c5816d81af7d25178c6b1f67 305 Gene3D G3DSA:3.30.70.890 163 292 2.7E-32 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily N288_20970 c04d0764c5816d81af7d25178c6b1f67 305 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 89 100 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 N288_00720 d1a89d8cc8c66f86e328b36a32243310 140 PRINTS PR01034 Ribosomal protein S12 signature 55 70 2.4E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00720 d1a89d8cc8c66f86e328b36a32243310 140 PRINTS PR01034 Ribosomal protein S12 signature 123 135 2.4E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00720 d1a89d8cc8c66f86e328b36a32243310 140 PRINTS PR01034 Ribosomal protein S12 signature 71 90 2.4E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00720 d1a89d8cc8c66f86e328b36a32243310 140 PRINTS PR01034 Ribosomal protein S12 signature 40 55 2.4E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00720 d1a89d8cc8c66f86e328b36a32243310 140 PRINTS PR01034 Ribosomal protein S12 signature 90 107 2.4E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00720 d1a89d8cc8c66f86e328b36a32243310 140 PRINTS PR01034 Ribosomal protein S12 signature 107 123 2.4E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00720 d1a89d8cc8c66f86e328b36a32243310 140 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 137 2.3E-69 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00720 d1a89d8cc8c66f86e328b36a32243310 140 PIRSF PIRSF002133 1 137 6.6E-50 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00720 d1a89d8cc8c66f86e328b36a32243310 140 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 40.881 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00720 d1a89d8cc8c66f86e328b36a32243310 140 Gene3D G3DSA:2.40.50.140 1 140 2.0E-63 T 12-10-2018 N288_00720 d1a89d8cc8c66f86e328b36a32243310 140 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00720 d1a89d8cc8c66f86e328b36a32243310 140 Pfam PF00164 Ribosomal protein S12/S23 32 136 2.0E-38 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00720 d1a89d8cc8c66f86e328b36a32243310 140 SUPERFAMILY SSF50249 2 136 1.97E-49 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_22830 fb9a93cc5577aeea042046355259bfb0 291 SUPERFAMILY SSF53067 1 287 1.95E-52 T 12-10-2018 N288_22830 fb9a93cc5577aeea042046355259bfb0 291 Pfam PF00480 ROK family 4 286 1.4E-47 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 N288_22830 fb9a93cc5577aeea042046355259bfb0 291 Gene3D G3DSA:3.30.420.40 101 291 1.5E-49 T 12-10-2018 N288_22830 fb9a93cc5577aeea042046355259bfb0 291 Gene3D G3DSA:3.30.420.40 1 99 7.7E-22 T 12-10-2018 N288_04890 890ba41bb67d7fd3e55be2c4da5691ca 273 SUPERFAMILY SSF161098 3 273 2.99E-68 T 12-10-2018 IPR035906 MetI-like superfamily N288_04890 890ba41bb67d7fd3e55be2c4da5691ca 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 258 2.1E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_04890 890ba41bb67d7fd3e55be2c4da5691ca 273 Gene3D G3DSA:1.10.3720.10 1 259 2.3E-58 T 12-10-2018 IPR035906 MetI-like superfamily N288_09450 ad89c25738889f02e0d77296004ae65f 204 SUPERFAMILY SSF63999 11 120 2.62E-28 T 12-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 N288_09450 ad89c25738889f02e0d77296004ae65f 204 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 140 197 3.7E-15 T 12-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 N288_09450 ad89c25738889f02e0d77296004ae65f 204 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 14 106 1.5E-18 T 12-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 N288_09450 ad89c25738889f02e0d77296004ae65f 204 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 11 200 1.7E-53 T 12-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 N288_09450 ad89c25738889f02e0d77296004ae65f 204 Gene3D G3DSA:3.40.50.10240 2 204 4.6E-66 T 12-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 N288_09450 ad89c25738889f02e0d77296004ae65f 204 SUPERFAMILY SSF63862 124 202 5.62E-13 T 12-10-2018 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 N288_09450 ad89c25738889f02e0d77296004ae65f 204 SMART SM00983 132 198 1.2E-20 T 12-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 N288_08595 2d2c8d2b466f56bc09eec90b149a6c08 301 Pfam PF00072 Response regulator receiver domain 177 294 1.1E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_08595 2d2c8d2b466f56bc09eec90b149a6c08 301 SMART SM00260 13 149 3.2E-27 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 N288_08595 2d2c8d2b466f56bc09eec90b149a6c08 301 Gene3D G3DSA:2.40.50.180 34 149 1.7E-33 T 12-10-2018 N288_08595 2d2c8d2b466f56bc09eec90b149a6c08 301 SUPERFAMILY SSF52172 174 299 6.12E-24 T 12-10-2018 IPR011006 CheY-like superfamily N288_08595 2d2c8d2b466f56bc09eec90b149a6c08 301 Gene3D G3DSA:2.30.30.40 19 143 1.7E-33 T 12-10-2018 N288_08595 2d2c8d2b466f56bc09eec90b149a6c08 301 Gene3D G3DSA:3.40.50.2300 168 301 8.9E-26 T 12-10-2018 N288_08595 2d2c8d2b466f56bc09eec90b149a6c08 301 SUPERFAMILY SSF50341 7 152 1.57E-33 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 N288_08595 2d2c8d2b466f56bc09eec90b149a6c08 301 Pfam PF01584 CheW-like domain 18 150 3.1E-31 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 N288_08595 2d2c8d2b466f56bc09eec90b149a6c08 301 SMART SM00448 174 296 3.2E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_08595 2d2c8d2b466f56bc09eec90b149a6c08 301 PIRSF PIRSF002867 1 301 3.8E-100 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV N288_21480 38aafcbc3e77aee07b2e07484e4e71f3 131 Gene3D G3DSA:1.10.10.10 12 130 7.9E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_21480 38aafcbc3e77aee07b2e07484e4e71f3 131 SUPERFAMILY SSF46785 9 82 9.14E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_21480 38aafcbc3e77aee07b2e07484e4e71f3 131 SMART SM00345 19 78 2.1E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_21480 38aafcbc3e77aee07b2e07484e4e71f3 131 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 2.7E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_22450 2b7584eacfe7548715a1a7b2ba0fea2c 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 130 4.0E-37 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 N288_22450 2b7584eacfe7548715a1a7b2ba0fea2c 339 Gene3D G3DSA:3.90.180.10 13 321 3.4E-106 T 12-10-2018 N288_22450 2b7584eacfe7548715a1a7b2ba0fea2c 339 Pfam PF00107 Zinc-binding dehydrogenase 172 297 1.6E-31 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 N288_22450 2b7584eacfe7548715a1a7b2ba0fea2c 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 N288_22450 2b7584eacfe7548715a1a7b2ba0fea2c 339 SMART SM00829 8 336 3.0E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 N288_22450 2b7584eacfe7548715a1a7b2ba0fea2c 339 Gene3D G3DSA:3.40.50.720 147 283 3.4E-106 T 12-10-2018 N288_22450 2b7584eacfe7548715a1a7b2ba0fea2c 339 SUPERFAMILY SSF50129 1 171 4.57E-53 T 12-10-2018 IPR011032 GroES-like superfamily N288_22450 2b7584eacfe7548715a1a7b2ba0fea2c 339 SUPERFAMILY SSF51735 135 302 3.68E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_15555 39574d48085eb09d61985ac8705664cb 243 Pfam PF02586 SOS response associated peptidase (SRAP) 22 228 3.8E-70 T 12-10-2018 IPR003738 SOS response associated peptidase (SRAP) N288_15555 39574d48085eb09d61985ac8705664cb 243 Gene3D G3DSA:3.90.1680.10 16 240 2.9E-75 T 12-10-2018 IPR036590 SOS response associated peptidase-like N288_15555 39574d48085eb09d61985ac8705664cb 243 SUPERFAMILY SSF143081 23 240 1.06E-76 T 12-10-2018 IPR036590 SOS response associated peptidase-like N288_11645 fcbd32a798b236532da3446a1baa9360 246 PRINTS PR01543 Arylamine N-acetyltransferase signature 42 65 7.7E-8 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 N288_11645 fcbd32a798b236532da3446a1baa9360 246 PRINTS PR01543 Arylamine N-acetyltransferase signature 66 88 7.7E-8 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 N288_11645 fcbd32a798b236532da3446a1baa9360 246 PRINTS PR01543 Arylamine N-acetyltransferase signature 164 186 7.7E-8 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 N288_11645 fcbd32a798b236532da3446a1baa9360 246 PRINTS PR01543 Arylamine N-acetyltransferase signature 18 41 7.7E-8 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 N288_11645 fcbd32a798b236532da3446a1baa9360 246 Gene3D G3DSA:3.30.2140.20 2 246 1.2E-70 T 12-10-2018 N288_11645 fcbd32a798b236532da3446a1baa9360 246 Pfam PF00797 N-acetyltransferase 19 243 2.9E-54 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 N288_11645 fcbd32a798b236532da3446a1baa9360 246 SUPERFAMILY SSF54001 1 244 3.34E-62 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily N288_01780 02c1ac0e7d2ee73b8b760d4f129b57f6 500 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 421 441 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site N288_01780 02c1ac0e7d2ee73b8b760d4f129b57f6 500 Gene3D G3DSA:1.20.1730.10 20 497 1.0E-103 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily N288_01780 02c1ac0e7d2ee73b8b760d4f129b57f6 500 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 439 6.0E-108 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 N288_01780 02c1ac0e7d2ee73b8b760d4f129b57f6 500 Pfam PF00474 Sodium:solute symporter family 33 439 6.0E-116 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 N288_01780 02c1ac0e7d2ee73b8b760d4f129b57f6 500 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 4 495 1.4E-223 T 12-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 N288_01780 02c1ac0e7d2ee73b8b760d4f129b57f6 500 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site N288_15365 0aa6fbae11c637e659ea247b85ff4887 302 SUPERFAMILY SSF53697 8 250 2.63E-69 T 12-10-2018 N288_15365 0aa6fbae11c637e659ea247b85ff4887 302 Pfam PF01380 SIS domain 131 200 2.2E-9 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 N288_15365 0aa6fbae11c637e659ea247b85ff4887 302 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 298 2.4E-131 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 N288_15365 0aa6fbae11c637e659ea247b85ff4887 302 Gene3D G3DSA:1.10.8.1080 221 299 2.7E-26 T 12-10-2018 N288_15365 0aa6fbae11c637e659ea247b85ff4887 302 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 41.719 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 N288_15365 0aa6fbae11c637e659ea247b85ff4887 302 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 12-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 N288_15365 0aa6fbae11c637e659ea247b85ff4887 302 Gene3D G3DSA:3.40.50.10490 2 220 3.5E-79 T 12-10-2018 N288_08395 7e45b10fb2a742c87c1f15b2c80d111f 407 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 119 398 2.4E-41 T 12-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 N288_08395 7e45b10fb2a742c87c1f15b2c80d111f 407 Gene3D G3DSA:3.20.20.110 114 404 4.5E-99 T 12-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 N288_08395 7e45b10fb2a742c87c1f15b2c80d111f 407 Gene3D G3DSA:3.30.70.150 1 113 4.7E-30 T 12-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 N288_08395 7e45b10fb2a742c87c1f15b2c80d111f 407 SUPERFAMILY SSF54966 1 113 9.99E-30 T 12-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 N288_08395 7e45b10fb2a742c87c1f15b2c80d111f 407 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 3 93 2.6E-7 T 12-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 N288_08395 7e45b10fb2a742c87c1f15b2c80d111f 407 Hamap MF_01679 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [mtnW]. 2 399 57.95 T 12-10-2018 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase GO:0000287|GO:0019509|GO:0043715 KEGG: 00270+5.3.2.5|MetaCyc: PWY-4361 N288_08395 7e45b10fb2a742c87c1f15b2c80d111f 407 TIGRFAM TIGR03332 salvage_mtnW: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase 2 399 4.9E-201 T 12-10-2018 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase GO:0000287|GO:0019509|GO:0043715 KEGG: 00270+5.3.2.5|MetaCyc: PWY-4361 N288_08395 7e45b10fb2a742c87c1f15b2c80d111f 407 SUPERFAMILY SSF51649 113 401 4.06E-84 T 12-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 N288_19970 a90696e92469605d4c759cf171f8eccf 1106 Pfam PF01580 FtsK/SpoIIIE family 744 891 1.2E-47 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 N288_19970 a90696e92469605d4c759cf171f8eccf 1106 Gene3D G3DSA:3.40.50.300 739 1019 8.2E-111 T 12-10-2018 N288_19970 a90696e92469605d4c759cf171f8eccf 1106 SMART SM00382 777 955 2.2E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_19970 a90696e92469605d4c759cf171f8eccf 1106 Gene3D G3DSA:1.10.10.10 1023 1090 7.5E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_19970 a90696e92469605d4c759cf171f8eccf 1106 Pfam PF09397 Ftsk gamma domain 1030 1092 3.5E-27 T 12-10-2018 IPR018541 FtsK gamma domain N288_19970 a90696e92469605d4c759cf171f8eccf 1106 SUPERFAMILY SSF52540 716 1005 2.92E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_19970 a90696e92469605d4c759cf171f8eccf 1106 SMART SM00843 1029 1094 1.9E-36 T 12-10-2018 IPR018541 FtsK gamma domain N288_19970 a90696e92469605d4c759cf171f8eccf 1106 SUPERFAMILY SSF46785 1030 1096 9.52E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_19970 a90696e92469605d4c759cf171f8eccf 1106 Gene3D G3DSA:3.30.980.40 636 738 3.2E-34 T 12-10-2018 N288_01565 551b4a513d01e01e31f9f85a8ef4fdd9 723 Gene3D G3DSA:2.40.50.140 633 721 3.4E-24 T 12-10-2018 N288_01565 551b4a513d01e01e31f9f85a8ef4fdd9 723 Gene3D G3DSA:1.10.150.310 496 630 7.2E-44 T 12-10-2018 N288_01565 551b4a513d01e01e31f9f85a8ef4fdd9 723 Pfam PF12836 Helix-hairpin-helix motif 488 552 4.1E-24 T 12-10-2018 N288_01565 551b4a513d01e01e31f9f85a8ef4fdd9 723 Pfam PF16921 Tex protein YqgF-like domain 323 448 1.7E-57 T 12-10-2018 IPR032639 Tex protein, YqgF-like domain N288_01565 551b4a513d01e01e31f9f85a8ef4fdd9 723 SUPERFAMILY SSF53098 319 466 5.31E-51 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily N288_01565 551b4a513d01e01e31f9f85a8ef4fdd9 723 Pfam PF09371 Tex-like protein N-terminal domain 15 198 6.7E-73 T 12-10-2018 IPR018974 Tex-like protein, N-terminal N288_01565 551b4a513d01e01e31f9f85a8ef4fdd9 723 SUPERFAMILY SSF50249 635 719 2.83E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_01565 551b4a513d01e01e31f9f85a8ef4fdd9 723 SUPERFAMILY SSF158832 8 318 2.62E-116 T 12-10-2018 N288_01565 551b4a513d01e01e31f9f85a8ef4fdd9 723 Gene3D G3DSA:3.30.420.140 322 448 4.4E-157 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 N288_01565 551b4a513d01e01e31f9f85a8ef4fdd9 723 SUPERFAMILY SSF47781 557 632 1.8E-15 T 12-10-2018 IPR010994 RuvA domain 2-like N288_01565 551b4a513d01e01e31f9f85a8ef4fdd9 723 Gene3D G3DSA:1.10.3500.10 118 495 4.4E-157 T 12-10-2018 IPR023323 Tex-like domain superfamily N288_01565 551b4a513d01e01e31f9f85a8ef4fdd9 723 SMART SM00316 649 720 2.1E-22 T 12-10-2018 IPR022967 RNA-binding domain, S1 N288_01565 551b4a513d01e01e31f9f85a8ef4fdd9 723 Pfam PF00575 S1 RNA binding domain 649 719 1.7E-15 T 12-10-2018 IPR003029 S1 domain GO:0003676 N288_01565 551b4a513d01e01e31f9f85a8ef4fdd9 723 SUPERFAMILY SSF47781 467 554 3.22E-25 T 12-10-2018 IPR010994 RuvA domain 2-like N288_01565 551b4a513d01e01e31f9f85a8ef4fdd9 723 SMART SM00732 323 421 1.6E-35 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 N288_01565 551b4a513d01e01e31f9f85a8ef4fdd9 723 Gene3D G3DSA:1.10.10.650 5 115 4.7E-40 T 12-10-2018 IPR023319 Tex-like protein, HTH domain superfamily N288_25050 fe85dfd77302859a0181b8e517bc3f23 172 Gene3D G3DSA:3.40.630.30 1 171 3.4E-51 T 12-10-2018 N288_25050 fe85dfd77302859a0181b8e517bc3f23 172 Pfam PF00583 Acetyltransferase (GNAT) family 39 147 1.5E-19 T 12-10-2018 IPR000182 GNAT domain N288_25050 fe85dfd77302859a0181b8e517bc3f23 172 SUPERFAMILY SSF55729 1 163 4.73E-35 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_14045 ab7e25a6ea53a7fafabfa214e77f61f9 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 183 3.0E-32 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_14045 ab7e25a6ea53a7fafabfa214e77f61f9 186 SUPERFAMILY SSF88659 124 185 1.25E-19 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_14045 ab7e25a6ea53a7fafabfa214e77f61f9 186 Gene3D G3DSA:1.10.1740.10 4 124 1.8E-25 T 12-10-2018 N288_14045 ab7e25a6ea53a7fafabfa214e77f61f9 186 Pfam PF08281 Sigma-70, region 4 128 179 2.9E-15 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_14045 ab7e25a6ea53a7fafabfa214e77f61f9 186 Pfam PF04542 Sigma-70 region 2 31 93 1.2E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_14045 ab7e25a6ea53a7fafabfa214e77f61f9 186 Gene3D G3DSA:1.10.10.10 125 186 8.9E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_14045 ab7e25a6ea53a7fafabfa214e77f61f9 186 SUPERFAMILY SSF88946 19 104 6.67E-22 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_01865 a49833a7a7a72ceda257e65908e4dedd 181 ProSitePatterns PS00501 Signal peptidases I serine active site. 39 46 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 N288_01865 a49833a7a7a72ceda257e65908e4dedd 181 Gene3D G3DSA:2.10.109.10 56 178 6.4E-43 T 12-10-2018 N288_01865 a49833a7a7a72ceda257e65908e4dedd 181 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 30 46 7.5E-22 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 N288_01865 a49833a7a7a72ceda257e65908e4dedd 181 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 77 89 7.5E-22 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 N288_01865 a49833a7a7a72ceda257e65908e4dedd 181 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 132 151 7.5E-22 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 N288_01865 a49833a7a7a72ceda257e65908e4dedd 181 ProSitePatterns PS00760 Signal peptidases I lysine active site. 79 91 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 N288_01865 a49833a7a7a72ceda257e65908e4dedd 181 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 13 173 9.5E-52 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 N288_01865 a49833a7a7a72ceda257e65908e4dedd 181 Pfam PF00717 Peptidase S24-like 36 101 2.1E-19 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C N288_01865 a49833a7a7a72ceda257e65908e4dedd 181 SUPERFAMILY SSF51306 28 177 1.96E-53 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily N288_01865 a49833a7a7a72ceda257e65908e4dedd 181 ProSitePatterns PS00761 Signal peptidases I signature 3. 137 150 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 N288_20975 1fe3a7b57cdeff1e81df45c979a8c910 353 SUPERFAMILY SSF53686 5 331 2.88E-105 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme N288_20975 1fe3a7b57cdeff1e81df45c979a8c910 353 TIGRFAM TIGR00260 thrC: threonine synthase 9 323 3.7E-101 T 12-10-2018 IPR004450 Threonine synthase-like N288_20975 1fe3a7b57cdeff1e81df45c979a8c910 353 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 51 64 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 N288_20975 1fe3a7b57cdeff1e81df45c979a8c910 353 Gene3D G3DSA:3.40.50.1100 59 155 8.6E-124 T 12-10-2018 N288_20975 1fe3a7b57cdeff1e81df45c979a8c910 353 PIRSF PIRSF038945 1 348 2.5E-159 T 12-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 N288_20975 1fe3a7b57cdeff1e81df45c979a8c910 353 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 316 2.0E-79 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme N288_20975 1fe3a7b57cdeff1e81df45c979a8c910 353 Gene3D G3DSA:3.40.50.1100 10 322 8.6E-124 T 12-10-2018 N288_00220 71896c92d581c60a7f584b10bc691dc1 335 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 247 329 5.9E-5 T 12-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_00220 71896c92d581c60a7f584b10bc691dc1 335 SUPERFAMILY SSF52540 11 199 6.08E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00220 71896c92d581c60a7f584b10bc691dc1 335 Pfam PF13177 DNA polymerase III, delta subunit 12 171 6.2E-56 T 12-10-2018 N288_00220 71896c92d581c60a7f584b10bc691dc1 335 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 17 199 6.6E-63 T 12-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_00220 71896c92d581c60a7f584b10bc691dc1 335 Gene3D G3DSA:3.40.50.300 8 171 5.4E-51 T 12-10-2018 N288_15300 51b478e11d2373feffd11433eef968a1 597 Gene3D G3DSA:2.120.10.30 244 331 1.7E-9 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like N288_15300 51b478e11d2373feffd11433eef968a1 597 Gene3D G3DSA:2.120.10.30 57 243 7.1E-22 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like N288_15300 51b478e11d2373feffd11433eef968a1 597 Pfam PF07676 WD40-like Beta Propeller Repeat 287 306 0.076 T 12-10-2018 IPR011659 WD40-like Beta Propeller N288_15300 51b478e11d2373feffd11433eef968a1 597 Pfam PF07676 WD40-like Beta Propeller Repeat 97 133 1.1E-4 T 12-10-2018 IPR011659 WD40-like Beta Propeller N288_15300 51b478e11d2373feffd11433eef968a1 597 Pfam PF07676 WD40-like Beta Propeller Repeat 197 217 4.5E-4 T 12-10-2018 IPR011659 WD40-like Beta Propeller N288_15300 51b478e11d2373feffd11433eef968a1 597 SUPERFAMILY SSF53474 341 591 1.89E-66 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_15300 51b478e11d2373feffd11433eef968a1 597 Pfam PF00326 Prolyl oligopeptidase family 390 593 2.5E-42 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 N288_15300 51b478e11d2373feffd11433eef968a1 597 SUPERFAMILY SSF82171 13 335 1.69E-37 T 12-10-2018 N288_15300 51b478e11d2373feffd11433eef968a1 597 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 395 419 8.1E-8 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 N288_15300 51b478e11d2373feffd11433eef968a1 597 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 369 387 8.1E-8 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 N288_15300 51b478e11d2373feffd11433eef968a1 597 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 423 442 8.1E-8 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 N288_15300 51b478e11d2373feffd11433eef968a1 597 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 453 473 8.1E-8 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 N288_15300 51b478e11d2373feffd11433eef968a1 597 Gene3D G3DSA:3.40.50.1820 332 595 7.5E-72 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_19085 7fe87d8a47c48e53de8feecec047f81d 326 Gene3D G3DSA:3.30.420.40 4 122 1.4E-8 T 12-10-2018 N288_19085 7fe87d8a47c48e53de8feecec047f81d 326 SUPERFAMILY SSF53067 53 172 2.46E-5 T 12-10-2018 N288_19085 7fe87d8a47c48e53de8feecec047f81d 326 Pfam PF11104 Type IV pilus assembly protein PilM; 19 213 1.1E-21 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM N288_19085 7fe87d8a47c48e53de8feecec047f81d 326 PIRSF PIRSF019169 2 326 1.8E-55 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM N288_20400 ca8718cf39b936ab92229f71a29d85b2 495 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 30 484 3.2E-138 T 12-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 N288_20400 ca8718cf39b936ab92229f71a29d85b2 495 Pfam PF00501 AMP-binding enzyme 10 394 3.3E-86 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 N288_20400 ca8718cf39b936ab92229f71a29d85b2 495 SUPERFAMILY SSF56801 4 489 1.7E-138 T 12-10-2018 N288_20400 ca8718cf39b936ab92229f71a29d85b2 495 Gene3D G3DSA:3.30.300.310 392 491 4.0E-35 T 12-10-2018 N288_20400 ca8718cf39b936ab92229f71a29d85b2 495 Gene3D G3DSA:3.40.50.12780 3 391 1.1E-116 T 12-10-2018 N288_20400 ca8718cf39b936ab92229f71a29d85b2 495 Pfam PF13193 AMP-binding enzyme C-terminal domain 403 478 4.7E-19 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain N288_20400 ca8718cf39b936ab92229f71a29d85b2 495 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 5 487 45.82 T 12-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 N288_20400 ca8718cf39b936ab92229f71a29d85b2 495 ProSitePatterns PS00455 Putative AMP-binding domain signature. 152 163 - T 12-10-2018 IPR020845 AMP-binding, conserved site N288_23060 3125891b9933280108baf69b31847a28 428 SUPERFAMILY SSF53850 22 426 5.12E-68 T 12-10-2018 N288_23060 3125891b9933280108baf69b31847a28 428 Gene3D G3DSA:3.40.190.10 29 424 3.1E-80 T 12-10-2018 N288_23060 3125891b9933280108baf69b31847a28 428 Pfam PF13416 Bacterial extracellular solute-binding protein 60 354 4.4E-38 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein N288_23060 3125891b9933280108baf69b31847a28 428 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 147 164 - T 12-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 N288_18845 7d186d5b68788355668fd45fafb61f76 788 Pfam PF02272 DHHA1 domain 315 438 2.5E-20 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 N288_18845 7d186d5b68788355668fd45fafb61f76 788 Gene3D G3DSA:3.10.310.30 319 444 3.9E-33 T 12-10-2018 N288_18845 7d186d5b68788355668fd45fafb61f76 788 Gene3D G3DSA:3.90.1640.30 58 318 3.1E-94 T 12-10-2018 N288_18845 7d186d5b68788355668fd45fafb61f76 788 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 568 770 2.3E-69 T 12-10-2018 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal N288_18845 7d186d5b68788355668fd45fafb61f76 788 Pfam PF01368 DHH family 83 225 3.9E-10 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 N288_18845 7d186d5b68788355668fd45fafb61f76 788 SUPERFAMILY SSF64182 57 452 3.01E-122 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily N288_18845 7d186d5b68788355668fd45fafb61f76 788 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 27 561 1.0E-176 T 12-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 N288_08465 b53b0b2cc27a2b9eb44411706184ad34 708 Gene3D G3DSA:4.10.860.10 338 379 2.6E-5 T 12-10-2018 N288_08465 b53b0b2cc27a2b9eb44411706184ad34 708 Gene3D G3DSA:3.40.50.300 73 263 5.8E-66 T 12-10-2018 N288_08465 b53b0b2cc27a2b9eb44411706184ad34 708 Gene3D G3DSA:3.40.50.300 401 617 5.5E-84 T 12-10-2018 N288_08465 b53b0b2cc27a2b9eb44411706184ad34 708 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 482 500 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 N288_08465 b53b0b2cc27a2b9eb44411706184ad34 708 Gene3D G3DSA:1.10.8.60 618 698 2.7E-23 T 12-10-2018 N288_08465 b53b0b2cc27a2b9eb44411706184ad34 708 SUPERFAMILY SSF52540 397 687 6.42E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_08465 b53b0b2cc27a2b9eb44411706184ad34 708 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 127 256 8.1E-13 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 N288_08465 b53b0b2cc27a2b9eb44411706184ad34 708 SMART SM01086 618 705 1.7E-28 T 12-10-2018 IPR019489 Clp ATPase, C-terminal N288_08465 b53b0b2cc27a2b9eb44411706184ad34 708 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 618 689 1.8E-23 T 12-10-2018 IPR019489 Clp ATPase, C-terminal N288_08465 b53b0b2cc27a2b9eb44411706184ad34 708 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 526 544 9.1E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 N288_08465 b53b0b2cc27a2b9eb44411706184ad34 708 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 452 470 9.1E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 N288_08465 b53b0b2cc27a2b9eb44411706184ad34 708 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 497 515 9.1E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 N288_08465 b53b0b2cc27a2b9eb44411706184ad34 708 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 559 573 9.1E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 N288_08465 b53b0b2cc27a2b9eb44411706184ad34 708 Pfam PF07724 AAA domain (Cdc48 subfamily) 447 612 1.7E-50 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 N288_08465 b53b0b2cc27a2b9eb44411706184ad34 708 SUPERFAMILY SSF52540 84 354 3.87E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_08465 b53b0b2cc27a2b9eb44411706184ad34 708 SMART SM00382 122 266 3.0E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_08465 b53b0b2cc27a2b9eb44411706184ad34 708 SMART SM00382 448 619 3.8E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_08465 b53b0b2cc27a2b9eb44411706184ad34 708 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 217 229 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 N288_24435 9b2df1c06ad7c694f1896cd387d5747b 518 Gene3D G3DSA:3.30.1360.60 438 516 3.2E-26 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 N288_24435 9b2df1c06ad7c694f1896cd387d5747b 518 Pfam PF02378 Phosphotransferase system, EIIC 12 349 5.5E-61 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 N288_24435 9b2df1c06ad7c694f1896cd387d5747b 518 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 409 501 9.4E-20 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 N288_24435 9b2df1c06ad7c694f1896cd387d5747b 518 SUPERFAMILY SSF55604 444 513 3.01E-21 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 N288_24435 9b2df1c06ad7c694f1896cd387d5747b 518 Pfam PF00367 phosphotransferase system, EIIB 445 477 2.5E-15 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 N288_24435 9b2df1c06ad7c694f1896cd387d5747b 518 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 455 472 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 N288_02630 c35d7856ef9f1e88ad65ec25c0116b24 277 SUPERFAMILY SSF53213 5 269 5.36E-29 T 12-10-2018 N288_02630 c35d7856ef9f1e88ad65ec25c0116b24 277 Gene3D G3DSA:3.40.830.10 4 269 2.1E-72 T 12-10-2018 N288_02630 c35d7856ef9f1e88ad65ec25c0116b24 277 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 252 1.8E-26 T 12-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 N288_20860 a0d8fcfdd9650fd6c452a531622e707c 197 SUPERFAMILY SSF56524 11 197 5.1E-60 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 N288_20860 a0d8fcfdd9650fd6c452a531622e707c 197 Pfam PF00174 Oxidoreductase molybdopterin binding domain 29 177 4.3E-34 T 12-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 N288_20860 a0d8fcfdd9650fd6c452a531622e707c 197 Gene3D G3DSA:3.90.420.10 21 195 1.1E-43 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 N288_15580 853ae20ad193a3751279b5e9b1c16c9d 411 Pfam PF03601 Conserved hypothetical protein 698 92 390 3.3E-82 T 12-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 N288_15485 7fd9d83419b4fad7349cedf5ddf6d544 101 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 9.7E-15 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain N288_15485 7fd9d83419b4fad7349cedf5ddf6d544 101 Gene3D G3DSA:3.30.70.100 1 101 9.0E-23 T 12-10-2018 N288_15485 7fd9d83419b4fad7349cedf5ddf6d544 101 SUPERFAMILY SSF54909 1 99 1.43E-23 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel N288_07910 72ee8b332b1fdc27f57f5d36445277fd 653 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 134 569 1.9E-95 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit N288_07910 72ee8b332b1fdc27f57f5d36445277fd 653 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 35 643 6.8E-236 T 12-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ N288_05995 bac213dd9855aa2f73ea404b8ce0c4d6 479 Gene3D G3DSA:2.60.60.30 19 185 5.9E-67 T 12-10-2018 N288_05995 bac213dd9855aa2f73ea404b8ce0c4d6 479 Pfam PF05099 Tellurite resistance protein TerB 343 477 5.8E-26 T 12-10-2018 IPR007791 Co-chaperone DjlA, N-terminal N288_05995 bac213dd9855aa2f73ea404b8ce0c4d6 479 SUPERFAMILY SSF158682 350 477 1.31E-21 T 12-10-2018 IPR029024 TerB-like N288_05995 bac213dd9855aa2f73ea404b8ce0c4d6 479 Pfam PF02342 TerD domain 1 186 3.6E-77 T 12-10-2018 IPR003325 TerD domain N288_05995 bac213dd9855aa2f73ea404b8ce0c4d6 479 Gene3D G3DSA:1.10.3680.10 333 478 1.5E-44 T 12-10-2018 IPR029024 TerB-like N288_19600 1b0403a0eb45ef97ef800b7061257573 469 SUPERFAMILY SSF53659 48 468 1.73E-142 T 12-10-2018 N288_19600 1b0403a0eb45ef97ef800b7061257573 469 SMART SM01329 67 464 1.3E-186 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 N288_19600 1b0403a0eb45ef97ef800b7061257573 469 Gene3D G3DSA:3.40.718.10 39 469 4.6E-183 T 12-10-2018 N288_19600 1b0403a0eb45ef97ef800b7061257573 469 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 68 463 2.5E-123 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 N288_19600 1b0403a0eb45ef97ef800b7061257573 469 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 353 372 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 N288_19600 1b0403a0eb45ef97ef800b7061257573 469 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 47 468 1.9E-223 T 12-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 N288_10685 2d50c42063754458db6b72ba19185b17 587 Pfam PF00005 ABC transporter 367 516 7.1E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_10685 2d50c42063754458db6b72ba19185b17 587 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_10685 2d50c42063754458db6b72ba19185b17 587 SUPERFAMILY SSF52540 340 586 1.78E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_10685 2d50c42063754458db6b72ba19185b17 587 Gene3D G3DSA:1.20.1560.10 2 335 6.2E-48 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_10685 2d50c42063754458db6b72ba19185b17 587 SUPERFAMILY SSF90123 19 330 5.23E-50 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_10685 2d50c42063754458db6b72ba19185b17 587 Gene3D G3DSA:3.40.50.300 336 587 4.2E-92 T 12-10-2018 N288_10685 2d50c42063754458db6b72ba19185b17 587 SMART SM00382 376 562 5.5E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_10685 2d50c42063754458db6b72ba19185b17 587 Pfam PF00664 ABC transporter transmembrane region 32 305 2.1E-31 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 N288_20190 675802803448452aac8dd1297f9c12c7 190 Gene3D G3DSA:3.40.50.150 1 190 1.0E-65 T 12-10-2018 N288_20190 675802803448452aac8dd1297f9c12c7 190 SUPERFAMILY SSF53335 4 152 1.69E-23 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_20190 675802803448452aac8dd1297f9c12c7 190 Pfam PF06962 Putative rRNA methylase 48 188 1.1E-47 T 12-10-2018 IPR010719 Putative rRNA methylase N288_02385 357c8e1e31cbb992a6b96cc3962ef8ca 146 PRINTS PR00502 NUDIX hydrolase family signature 43 57 8.3E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_02385 357c8e1e31cbb992a6b96cc3962ef8ca 146 PRINTS PR00502 NUDIX hydrolase family signature 57 72 8.3E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_02385 357c8e1e31cbb992a6b96cc3962ef8ca 146 Pfam PF00293 NUDIX domain 20 141 8.5E-20 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_02385 357c8e1e31cbb992a6b96cc3962ef8ca 146 Gene3D G3DSA:3.90.79.10 1 143 1.6E-33 T 12-10-2018 N288_02385 357c8e1e31cbb992a6b96cc3962ef8ca 146 SUPERFAMILY SSF55811 18 136 2.3E-26 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_13765 4fece548e18c32a023ffd50a1998d7be 172 SUPERFAMILY SSF55811 27 140 8.26E-14 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_13765 4fece548e18c32a023ffd50a1998d7be 172 Gene3D G3DSA:3.90.79.10 9 164 2.5E-17 T 12-10-2018 N288_13765 4fece548e18c32a023ffd50a1998d7be 172 Pfam PF00293 NUDIX domain 37 135 2.5E-10 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_18770 74dfee8fe6d4e4a4fed705ca84db5604 216 Gene3D G3DSA:1.25.40.10 101 216 3.1E-26 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_18770 74dfee8fe6d4e4a4fed705ca84db5604 216 Pfam PF00515 Tetratricopeptide repeat 170 203 4.6E-8 T 12-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 N288_18770 74dfee8fe6d4e4a4fed705ca84db5604 216 SUPERFAMILY SSF48452 4 204 4.55E-36 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_18770 74dfee8fe6d4e4a4fed705ca84db5604 216 Gene3D G3DSA:1.25.40.10 2 100 6.5E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_18770 74dfee8fe6d4e4a4fed705ca84db5604 216 SMART SM00028 34 67 3.4E-6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_18770 74dfee8fe6d4e4a4fed705ca84db5604 216 SMART SM00028 170 203 3.6E-6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_18770 74dfee8fe6d4e4a4fed705ca84db5604 216 SMART SM00028 136 169 0.0041 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_18770 74dfee8fe6d4e4a4fed705ca84db5604 216 SMART SM00028 102 135 16.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_18770 74dfee8fe6d4e4a4fed705ca84db5604 216 SMART SM00028 68 101 7.9 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_18770 74dfee8fe6d4e4a4fed705ca84db5604 216 Pfam PF13432 Tetratricopeptide repeat 106 169 1.6E-7 T 12-10-2018 N288_18770 74dfee8fe6d4e4a4fed705ca84db5604 216 Pfam PF13414 TPR repeat 41 80 1.9E-9 T 12-10-2018 N288_11665 b26a367b2755a017e2c30531d2eaea2e 474 SUPERFAMILY SSF53383 78 469 7.09E-47 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_11665 b26a367b2755a017e2c30531d2eaea2e 474 Gene3D G3DSA:3.90.1150.110 29 457 4.9E-163 T 12-10-2018 N288_11665 b26a367b2755a017e2c30531d2eaea2e 474 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 5 463 9.6E-170 T 12-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 N288_11665 b26a367b2755a017e2c30531d2eaea2e 474 Gene3D G3DSA:3.40.640.10 99 363 4.9E-163 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_11665 b26a367b2755a017e2c30531d2eaea2e 474 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 470 190.741 T 12-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 N288_11665 b26a367b2755a017e2c30531d2eaea2e 474 Pfam PF03841 L-seryl-tRNA selenium transferase 87 452 2.3E-147 T 12-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 N288_08845 6ed18019f76a7b3ff61a4f663d2b591a 319 Gene3D G3DSA:3.20.20.70 1 318 1.4E-103 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_08845 6ed18019f76a7b3ff61a4f663d2b591a 319 Pfam PF03060 Nitronate monooxygenase 79 308 1.1E-48 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 N288_08845 6ed18019f76a7b3ff61a4f663d2b591a 319 Pfam PF03060 Nitronate monooxygenase 5 75 3.1E-17 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 N288_08845 6ed18019f76a7b3ff61a4f663d2b591a 319 SUPERFAMILY SSF51412 3 315 6.87E-64 T 12-10-2018 N288_17825 a644e1c0011f1af68d361826c3b28f34 446 Pfam PF02601 Exonuclease VII, large subunit 125 439 6.6E-100 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 N288_17825 a644e1c0011f1af68d361826c3b28f34 446 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 4 442 30.209 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 N288_17825 a644e1c0011f1af68d361826c3b28f34 446 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 8 442 2.0E-152 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 N288_17825 a644e1c0011f1af68d361826c3b28f34 446 Pfam PF13742 OB-fold nucleic acid binding domain 7 102 7.8E-31 T 12-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 N288_07275 34c547b6e001dbe71457fcb9722b468d 302 Gene3D G3DSA:3.90.850.10 87 302 2.4E-87 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 N288_07275 34c547b6e001dbe71457fcb9722b468d 302 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 93 300 8.6E-72 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 N288_07275 34c547b6e001dbe71457fcb9722b468d 302 SUPERFAMILY SSF56529 87 300 3.14E-78 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 N288_18415 69b66d3de660a581306adf435c185b0b 320 SUPERFAMILY SSF52540 112 286 6.67E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_18415 69b66d3de660a581306adf435c185b0b 320 SUPERFAMILY SSF54791 20 67 1.82E-5 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 N288_18415 69b66d3de660a581306adf435c185b0b 320 SMART SM00322 4 68 0.0016 T 12-10-2018 IPR004087 K Homology domain GO:0003676 N288_18415 69b66d3de660a581306adf435c185b0b 320 Pfam PF02562 PhoH-like protein 113 316 7.9E-96 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 N288_18415 69b66d3de660a581306adf435c185b0b 320 Gene3D G3DSA:3.40.50.300 109 316 1.1E-74 T 12-10-2018 N288_05680 f0b0673703409f07d8da1466153eaa03 176 Pfam PF04167 Protein of unknown function (DUF402) 60 124 1.6E-16 T 12-10-2018 IPR007295 Domain of unknown function DUF402 N288_05680 f0b0673703409f07d8da1466153eaa03 176 Hamap MF_01568 UPF0374 protein . 1 175 52.049 T 12-10-2018 IPR016882 Uncharacterised protein family UPF0374 N288_05680 f0b0673703409f07d8da1466153eaa03 176 Gene3D G3DSA:2.40.380.10 42 169 5.3E-10 T 12-10-2018 IPR035930 FomD-like superfamily N288_05680 f0b0673703409f07d8da1466153eaa03 176 SUPERFAMILY SSF159234 3 171 9.29E-32 T 12-10-2018 IPR035930 FomD-like superfamily N288_05680 f0b0673703409f07d8da1466153eaa03 176 PIRSF PIRSF028345 1 176 4.0E-81 T 12-10-2018 IPR016882 Uncharacterised protein family UPF0374 N288_25710 b34d1c48d23947abfeae706205006567 343 SUPERFAMILY SSF81345 14 336 2.62E-64 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_25710 b34d1c48d23947abfeae706205006567 343 Gene3D G3DSA:1.10.3470.10 15 341 1.1E-78 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_25710 b34d1c48d23947abfeae706205006567 343 Pfam PF01032 FecCD transport family 34 336 5.6E-73 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 N288_01770 0386bf46d482911923fb306acfe9ef6d 515 TIGRFAM TIGR01237 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase 5 515 1.5E-252 T 12-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 N288_01770 0386bf46d482911923fb306acfe9ef6d 515 SUPERFAMILY SSF53720 4 511 4.97E-159 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 N288_01770 0386bf46d482911923fb306acfe9ef6d 515 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 313 324 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 N288_01770 0386bf46d482911923fb306acfe9ef6d 515 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 285 292 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 N288_01770 0386bf46d482911923fb306acfe9ef6d 515 Pfam PF00171 Aldehyde dehydrogenase family 49 510 1.2E-160 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 N288_01770 0386bf46d482911923fb306acfe9ef6d 515 Hamap MF_00733 1-pyrroline-5-carboxylate dehydrogenase [rocA]. 1 515 69.457 T 12-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 N288_01770 0386bf46d482911923fb306acfe9ef6d 515 Gene3D G3DSA:3.40.605.10 39 502 1.6E-191 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 N288_01770 0386bf46d482911923fb306acfe9ef6d 515 Gene3D G3DSA:3.40.309.10 289 479 1.6E-191 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 N288_00385 8eb8f4a689733827a9b55d44cbc42b8b 208 TIGRFAM TIGR02893 spore_yabQ: spore cortex biosynthesis protein YabQ 2 129 1.4E-40 T 12-10-2018 IPR014242 Spore cortex biosynthesis protein, YabQ N288_00385 8eb8f4a689733827a9b55d44cbc42b8b 208 Pfam PF09578 Spore cortex protein YabQ (Spore_YabQ) 11 87 4.6E-22 T 12-10-2018 IPR019074 Spore cortex biosynthesis protein, YabQ-like N288_05005 b69265d285ae45cad9ec73f7da219839 263 Gene3D G3DSA:3.40.190.10 125 222 4.8E-77 T 12-10-2018 N288_05005 b69265d285ae45cad9ec73f7da219839 263 Gene3D G3DSA:3.40.190.10 45 260 4.8E-77 T 12-10-2018 N288_05005 b69265d285ae45cad9ec73f7da219839 263 SUPERFAMILY SSF53850 1 261 5.39E-71 T 12-10-2018 N288_05005 b69265d285ae45cad9ec73f7da219839 263 SMART SM00079 41 254 5.9E-6 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 N288_05005 b69265d285ae45cad9ec73f7da219839 263 SMART SM00062 41 263 2.0E-73 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF N288_05005 b69265d285ae45cad9ec73f7da219839 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 262 2.8E-67 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF N288_06135 f628c3ec177f454d15dbea67b95eb43f 323 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 N288_06135 f628c3ec177f454d15dbea67b95eb43f 323 Gene3D G3DSA:1.10.260.40 3 59 1.3E-18 T 12-10-2018 N288_06135 f628c3ec177f454d15dbea67b95eb43f 323 SUPERFAMILY SSF53822 58 308 2.94E-57 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_06135 f628c3ec177f454d15dbea67b95eb43f 323 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 5.3E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_06135 f628c3ec177f454d15dbea67b95eb43f 323 Gene3D G3DSA:3.40.50.2300 158 285 3.0E-60 T 12-10-2018 N288_06135 f628c3ec177f454d15dbea67b95eb43f 323 Pfam PF13377 Periplasmic binding protein-like domain 167 323 5.7E-29 T 12-10-2018 N288_06135 f628c3ec177f454d15dbea67b95eb43f 323 SMART SM00354 1 71 2.4E-30 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_06135 f628c3ec177f454d15dbea67b95eb43f 323 Gene3D G3DSA:3.40.50.2300 60 301 3.0E-60 T 12-10-2018 N288_06135 f628c3ec177f454d15dbea67b95eb43f 323 SUPERFAMILY SSF47413 1 59 6.66E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_22810 d98a0fda39773b0ddb3262024bdf56ce 378 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 4.6E-27 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_22810 d98a0fda39773b0ddb3262024bdf56ce 378 PRINTS PR00834 HtrA/DegQ protease family signature 109 129 4.6E-27 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_22810 d98a0fda39773b0ddb3262024bdf56ce 378 PRINTS PR00834 HtrA/DegQ protease family signature 150 174 4.6E-27 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_22810 d98a0fda39773b0ddb3262024bdf56ce 378 PRINTS PR00834 HtrA/DegQ protease family signature 88 100 4.6E-27 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_22810 d98a0fda39773b0ddb3262024bdf56ce 378 PRINTS PR00834 HtrA/DegQ protease family signature 318 330 4.6E-27 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_22810 d98a0fda39773b0ddb3262024bdf56ce 378 Gene3D G3DSA:2.40.10.120 44 245 3.3E-53 T 12-10-2018 N288_22810 d98a0fda39773b0ddb3262024bdf56ce 378 Pfam PF13365 Trypsin-like peptidase domain 79 216 2.3E-26 T 12-10-2018 N288_22810 d98a0fda39773b0ddb3262024bdf56ce 378 SUPERFAMILY SSF50494 56 243 8.8E-47 T 12-10-2018 IPR009003 Peptidase S1, PA clan N288_17485 94d17d2656cc59085be0dd80a3881a4e 188 Gene3D G3DSA:3.40.630.30 6 187 2.4E-46 T 12-10-2018 N288_17485 94d17d2656cc59085be0dd80a3881a4e 188 Pfam PF13302 Acetyltransferase (GNAT) domain 17 160 1.8E-28 T 12-10-2018 IPR000182 GNAT domain N288_17485 94d17d2656cc59085be0dd80a3881a4e 188 SUPERFAMILY SSF55729 11 186 6.25E-44 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_07450 44c94ae4eab6b0088f72af717d0f71a5 264 Gene3D G3DSA:3.40.50.1820 1 256 1.4E-57 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_07450 44c94ae4eab6b0088f72af717d0f71a5 264 SUPERFAMILY SSF53474 24 257 1.14E-35 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_07450 44c94ae4eab6b0088f72af717d0f71a5 264 Pfam PF00326 Prolyl oligopeptidase family 95 257 1.8E-13 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 N288_16720 bbb47aa12b22043a85a057b7e9aef91e 640 Gene3D G3DSA:3.40.50.300 36 310 1.6E-30 T 12-10-2018 N288_16720 bbb47aa12b22043a85a057b7e9aef91e 640 Pfam PF13307 Helicase C-terminal domain 486 624 5.0E-23 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 N288_16720 bbb47aa12b22043a85a057b7e9aef91e 640 Gene3D G3DSA:3.40.50.300 457 635 1.1E-23 T 12-10-2018 N288_16720 bbb47aa12b22043a85a057b7e9aef91e 640 SMART SM00491 506 623 3.3E-10 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 N288_16720 bbb47aa12b22043a85a057b7e9aef91e 640 SUPERFAMILY SSF52540 52 621 1.13E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_18610 4140ed5f9be8f51b04a48cec7761068f 179 Pfam PF01066 CDP-alcohol phosphatidyltransferase 18 81 2.5E-14 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 N288_18610 4140ed5f9be8f51b04a48cec7761068f 179 Gene3D G3DSA:1.20.120.1760 11 176 1.3E-10 T 12-10-2018 N288_18610 4140ed5f9be8f51b04a48cec7761068f 179 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 59 81 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 N288_18610 4140ed5f9be8f51b04a48cec7761068f 179 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 23 173 5.2E-40 T 12-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 N288_13795 30be3654d52544856bf793d5e4a02ec9 364 Pfam PF01212 Beta-eliminating lyase 39 281 4.0E-32 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 N288_13795 30be3654d52544856bf793d5e4a02ec9 364 Gene3D G3DSA:3.90.1150.10 256 359 3.5E-38 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_13795 30be3654d52544856bf793d5e4a02ec9 364 SUPERFAMILY SSF53383 38 313 4.13E-63 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_13795 30be3654d52544856bf793d5e4a02ec9 364 Gene3D G3DSA:3.40.640.10 2 255 3.8E-72 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_13280 7ca39c286fc428152077fda3329a884f 383 Pfam PF01747 ATP-sulfurylase 165 375 2.2E-92 T 12-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 N288_13280 7ca39c286fc428152077fda3329a884f 383 SUPERFAMILY SSF88697 8 158 1.19E-44 T 12-10-2018 IPR015947 PUA-like superfamily N288_13280 7ca39c286fc428152077fda3329a884f 383 Gene3D G3DSA:3.40.50.620 164 377 2.1E-94 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_13280 7ca39c286fc428152077fda3329a884f 383 SUPERFAMILY SSF52374 165 375 3.44E-84 T 12-10-2018 N288_13280 7ca39c286fc428152077fda3329a884f 383 Pfam PF14306 PUA-like domain 7 156 1.8E-45 T 12-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 N288_13280 7ca39c286fc428152077fda3329a884f 383 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 8 374 9.2E-130 T 12-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 N288_13280 7ca39c286fc428152077fda3329a884f 383 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 23 379 49.752 T 12-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 N288_13280 7ca39c286fc428152077fda3329a884f 383 Gene3D G3DSA:3.10.400.10 6 156 3.3E-43 T 12-10-2018 N288_20005 5d9654f138a754fae9ebb0d35533ee49 357 SUPERFAMILY SSF101821 71 180 4.27E-31 T 12-10-2018 N288_20005 5d9654f138a754fae9ebb0d35533ee49 357 Gene3D G3DSA:3.40.630.10 10 340 2.4E-117 T 12-10-2018 N288_20005 5d9654f138a754fae9ebb0d35533ee49 357 Pfam PF05343 M42 glutamyl aminopeptidase 46 337 6.3E-113 T 12-10-2018 IPR008007 Peptidase M42 N288_20005 5d9654f138a754fae9ebb0d35533ee49 357 SUPERFAMILY SSF53187 5 349 1.67E-69 T 12-10-2018 N288_20005 5d9654f138a754fae9ebb0d35533ee49 357 PIRSF PIRSF001123 2 356 4.5E-151 T 12-10-2018 IPR008007 Peptidase M42 N288_20005 5d9654f138a754fae9ebb0d35533ee49 357 Gene3D G3DSA:2.40.30.40 75 162 2.4E-117 T 12-10-2018 IPR023367 Peptidase M42, domain 2 N288_05795 7f1d5dccbfb30fbf2e938a081876aad9 290 Gene3D G3DSA:1.20.120.330 116 232 2.0E-50 T 12-10-2018 N288_05795 7f1d5dccbfb30fbf2e938a081876aad9 290 Gene3D G3DSA:3.30.460.10 1 114 3.7E-45 T 12-10-2018 N288_05795 7f1d5dccbfb30fbf2e938a081876aad9 290 ProDom PD128250 YGXA BH0953 1 279 2.0E-97 T 12-10-2018 N288_05795 7f1d5dccbfb30fbf2e938a081876aad9 290 Pfam PF14540 Nucleotidyltransferase-like 1 118 6.3E-51 T 12-10-2018 IPR029348 Nucleotidyltransferase-like domain N288_11195 ddb970f0c59294c7611ee8e4a547b5b9 532 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 11 512 9.4E-81 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 N288_11195 ddb970f0c59294c7611ee8e4a547b5b9 532 Gene3D G3DSA:1.20.1250.20 257 441 1.6E-23 T 12-10-2018 N288_11195 ddb970f0c59294c7611ee8e4a547b5b9 532 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_11195 ddb970f0c59294c7611ee8e4a547b5b9 532 SUPERFAMILY SSF103473 5 514 2.62E-72 T 12-10-2018 IPR036259 MFS transporter superfamily N288_11195 ddb970f0c59294c7611ee8e4a547b5b9 532 Pfam PF07690 Major Facilitator Superfamily 17 408 1.8E-51 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_11195 ddb970f0c59294c7611ee8e4a547b5b9 532 PRINTS PR01036 Tetracycline resistance protein TetB signature 300 324 2.8E-7 T 12-10-2018 N288_11195 ddb970f0c59294c7611ee8e4a547b5b9 532 PRINTS PR01036 Tetracycline resistance protein TetB signature 265 290 2.8E-7 T 12-10-2018 N288_11195 ddb970f0c59294c7611ee8e4a547b5b9 532 PRINTS PR01036 Tetracycline resistance protein TetB signature 15 39 2.8E-7 T 12-10-2018 N288_11195 ddb970f0c59294c7611ee8e4a547b5b9 532 PRINTS PR01036 Tetracycline resistance protein TetB signature 399 418 2.8E-7 T 12-10-2018 N288_11195 ddb970f0c59294c7611ee8e4a547b5b9 532 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 2.8E-7 T 12-10-2018 N288_11195 ddb970f0c59294c7611ee8e4a547b5b9 532 Gene3D G3DSA:1.20.1720.10 12 197 7.3E-50 T 12-10-2018 N288_14010 73b5ef91bf63dbbd4993edf6b86874e6 194 Gene3D G3DSA:3.40.630.30 1 145 1.1E-24 T 12-10-2018 N288_14010 73b5ef91bf63dbbd4993edf6b86874e6 194 Pfam PF00583 Acetyltransferase (GNAT) family 33 132 9.7E-14 T 12-10-2018 IPR000182 GNAT domain N288_14010 73b5ef91bf63dbbd4993edf6b86874e6 194 SUPERFAMILY SSF55729 1 142 3.93E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_01475 cff8cf27d2ee02410f2354217ec33bb9 498 Hamap MF_01493 DEAD-box ATP-dependent RNA helicase CshA [cshA]. 2 498 45.348 T 12-10-2018 IPR030880 DEAD-box ATP-dependent RNA helicase CshA GO:0004004|GO:0005524|GO:0010501 N288_01475 cff8cf27d2ee02410f2354217ec33bb9 498 Gene3D G3DSA:3.40.50.300 1 207 6.0E-75 T 12-10-2018 N288_01475 cff8cf27d2ee02410f2354217ec33bb9 498 SUPERFAMILY SSF52540 72 353 3.62E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_01475 cff8cf27d2ee02410f2354217ec33bb9 498 Pfam PF00270 DEAD/DEAH box helicase 26 190 8.8E-47 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 N288_01475 cff8cf27d2ee02410f2354217ec33bb9 498 Gene3D G3DSA:3.40.50.300 212 432 1.4E-53 T 12-10-2018 N288_01475 cff8cf27d2ee02410f2354217ec33bb9 498 SMART SM00487 21 218 5.2E-64 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_01475 cff8cf27d2ee02410f2354217ec33bb9 498 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 149 157 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site N288_01475 cff8cf27d2ee02410f2354217ec33bb9 498 SMART SM00490 254 335 4.7E-36 T 12-10-2018 IPR001650 Helicase, C-terminal N288_01475 cff8cf27d2ee02410f2354217ec33bb9 498 Pfam PF00271 Helicase conserved C-terminal domain 227 335 8.6E-30 T 12-10-2018 IPR001650 Helicase, C-terminal N288_19655 813981a3e86b0851a194f8f100fd541f 205 Gene3D G3DSA:1.10.10.10 6 126 1.4E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_19655 813981a3e86b0851a194f8f100fd541f 205 SUPERFAMILY SSF48008 94 198 1.23E-7 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal N288_19655 813981a3e86b0851a194f8f100fd541f 205 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 70 4.9E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_19655 813981a3e86b0851a194f8f100fd541f 205 SUPERFAMILY SSF46785 4 74 1.44E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_19655 813981a3e86b0851a194f8f100fd541f 205 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 8.0E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_19655 813981a3e86b0851a194f8f100fd541f 205 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 8.0E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_19655 813981a3e86b0851a194f8f100fd541f 205 Pfam PF07729 FCD domain 97 197 2.1E-5 T 12-10-2018 IPR011711 GntR, C-terminal N288_19655 813981a3e86b0851a194f8f100fd541f 205 SMART SM00345 11 70 1.5E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_00150 9b764dcb7ae1a24d573988b04567ed0f 198 Pfam PF13662 Toprim domain 80 171 1.8E-25 T 12-10-2018 IPR006171 TOPRIM domain N288_00150 9b764dcb7ae1a24d573988b04567ed0f 198 SMART SM00493 80 165 6.0E-18 T 12-10-2018 IPR006171 TOPRIM domain N288_00150 9b764dcb7ae1a24d573988b04567ed0f 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 112.233 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 N288_00150 9b764dcb7ae1a24d573988b04567ed0f 198 SUPERFAMILY SSF111304 1 198 3.01E-79 T 12-10-2018 IPR023627 Recombination protein RecR N288_00150 9b764dcb7ae1a24d573988b04567ed0f 198 Gene3D G3DSA:3.40.1360.10 77 198 1.8E-49 T 12-10-2018 N288_00150 9b764dcb7ae1a24d573988b04567ed0f 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 12-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 N288_00150 9b764dcb7ae1a24d573988b04567ed0f 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 196 7.4E-91 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 N288_00150 9b764dcb7ae1a24d573988b04567ed0f 198 Pfam PF02132 RecR protein 40 78 1.9E-17 T 12-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger N288_00150 9b764dcb7ae1a24d573988b04567ed0f 198 Gene3D G3DSA:1.10.8.420 1 53 7.4E-21 T 12-10-2018 N288_05560 ef1a0917abf8caa076d3f599661d4a71 136 SUPERFAMILY SSF57716 95 129 1.24E-5 T 12-10-2018 N288_05560 ef1a0917abf8caa076d3f599661d4a71 136 Gene3D G3DSA:3.30.50.30 85 132 2.4E-10 T 12-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily N288_05560 ef1a0917abf8caa076d3f599661d4a71 136 Pfam PF06689 ClpX C4-type zinc finger 95 130 3.9E-10 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 N288_05560 ef1a0917abf8caa076d3f599661d4a71 136 SMART SM00994 93 132 3.9E-7 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 N288_14815 189318fc99b28a0511e9f5f27001465f 155 Pfam PF00583 Acetyltransferase (GNAT) family 35 134 2.5E-14 T 12-10-2018 IPR000182 GNAT domain N288_14815 189318fc99b28a0511e9f5f27001465f 155 Gene3D G3DSA:3.40.630.30 50 146 1.0E-22 T 12-10-2018 N288_14815 189318fc99b28a0511e9f5f27001465f 155 SUPERFAMILY SSF55729 1 150 2.62E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_10730 c25c1f571e12027341af4319ae6a8250 289 SUPERFAMILY SSF161098 8 288 7.85E-57 T 12-10-2018 IPR035906 MetI-like superfamily N288_10730 c25c1f571e12027341af4319ae6a8250 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 280 1.5E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_10730 c25c1f571e12027341af4319ae6a8250 289 Gene3D G3DSA:1.10.3720.10 3 280 2.2E-69 T 12-10-2018 IPR035906 MetI-like superfamily N288_22325 f09243eda7d0890963b71ebdd122a53f 412 SUPERFAMILY SSF48452 147 253 3.22E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_22325 f09243eda7d0890963b71ebdd122a53f 412 Gene3D G3DSA:1.25.40.10 173 411 1.4E-32 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_22325 f09243eda7d0890963b71ebdd122a53f 412 SUPERFAMILY SSF47413 1 58 1.69E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_22325 f09243eda7d0890963b71ebdd122a53f 412 Gene3D G3DSA:1.10.260.40 2 58 3.0E-11 T 12-10-2018 N288_22325 f09243eda7d0890963b71ebdd122a53f 412 SMART SM00530 6 60 1.3E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_22325 f09243eda7d0890963b71ebdd122a53f 412 Pfam PF13424 Tetratricopeptide repeat 225 295 4.7E-8 T 12-10-2018 N288_22325 f09243eda7d0890963b71ebdd122a53f 412 SUPERFAMILY SSF48452 226 333 2.61E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_22325 f09243eda7d0890963b71ebdd122a53f 412 Pfam PF01381 Helix-turn-helix 7 58 5.5E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_22325 f09243eda7d0890963b71ebdd122a53f 412 SMART SM00028 266 299 0.0073 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_22325 f09243eda7d0890963b71ebdd122a53f 412 SMART SM00028 225 258 320.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_22325 f09243eda7d0890963b71ebdd122a53f 412 Gene3D G3DSA:1.25.40.1000 59 160 5.9E-9 T 12-10-2018 N288_05515 f1b72a8fc829d073b851fcab287b88a3 435 SUPERFAMILY SSF53850 43 435 8.58E-74 T 12-10-2018 N288_05515 f1b72a8fc829d073b851fcab287b88a3 435 Gene3D G3DSA:3.40.190.10 49 392 4.5E-103 T 12-10-2018 N288_05515 f1b72a8fc829d073b851fcab287b88a3 435 Pfam PF13416 Bacterial extracellular solute-binding protein 64 371 5.3E-52 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein N288_05515 f1b72a8fc829d073b851fcab287b88a3 435 Gene3D G3DSA:3.40.190.10 161 429 4.5E-103 T 12-10-2018 N288_03845 ff4a5719119aa0eb8c796ee91a3cc3d2 151 SMART SM00871 1 149 1.0E-24 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding N288_03845 ff4a5719119aa0eb8c796ee91a3cc3d2 151 Gene3D G3DSA:3.20.80.10 1 150 8.5E-36 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily N288_03845 ff4a5719119aa0eb8c796ee91a3cc3d2 151 SUPERFAMILY SSF55136 1 150 1.48E-31 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily N288_03845 ff4a5719119aa0eb8c796ee91a3cc3d2 151 Pfam PF06445 GyrI-like small molecule binding domain 1 149 1.0E-29 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain N288_06165 529058f51f0c7f29c0e98e491e8cfc09 514 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 N288_06165 529058f51f0c7f29c0e98e491e8cfc09 514 SUPERFAMILY SSF53067 5 252 3.77E-67 T 12-10-2018 N288_06165 529058f51f0c7f29c0e98e491e8cfc09 514 Gene3D G3DSA:3.30.420.40 3 251 7.3E-78 T 12-10-2018 N288_06165 529058f51f0c7f29c0e98e491e8cfc09 514 SUPERFAMILY SSF53067 253 500 9.26E-69 T 12-10-2018 N288_06165 529058f51f0c7f29c0e98e491e8cfc09 514 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 367 387 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 N288_06165 529058f51f0c7f29c0e98e491e8cfc09 514 PIRSF PIRSF000538 4 507 8.2E-143 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 N288_06165 529058f51f0c7f29c0e98e491e8cfc09 514 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 250 3.8E-69 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 N288_06165 529058f51f0c7f29c0e98e491e8cfc09 514 TIGRFAM TIGR01314 gntK_FGGY: gluconate kinase 6 510 5.7E-253 T 12-10-2018 IPR006002 Gluconate kinase GO:0019521|GO:0046316 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 N288_06165 529058f51f0c7f29c0e98e491e8cfc09 514 Gene3D G3DSA:3.30.420.40 252 513 1.0E-92 T 12-10-2018 N288_06165 529058f51f0c7f29c0e98e491e8cfc09 514 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 454 1.6E-36 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 N288_15180 522100a5c5e27c37acc102655ae75280 355 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 230 239 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_15180 522100a5c5e27c37acc102655ae75280 355 Gene3D G3DSA:3.40.50.12240 61 150 4.2E-8 T 12-10-2018 N288_15180 522100a5c5e27c37acc102655ae75280 355 Gene3D G3DSA:1.10.1140.10 242 355 1.1E-26 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_15180 522100a5c5e27c37acc102655ae75280 355 SUPERFAMILY SSF52540 69 243 1.5E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_15180 522100a5c5e27c37acc102655ae75280 355 SUPERFAMILY SSF47917 244 353 3.66E-20 T 12-10-2018 N288_05275 2e4807a1c3d2da334dc5c587a6122f5e 681 SUPERFAMILY SSF141868 426 675 6.15E-77 T 12-10-2018 IPR035919 EAL domain superfamily N288_05275 2e4807a1c3d2da334dc5c587a6122f5e 681 SUPERFAMILY SSF55073 264 392 1.18E-13 T 12-10-2018 IPR029787 Nucleotide cyclase N288_05275 2e4807a1c3d2da334dc5c587a6122f5e 681 Pfam PF00563 EAL domain 428 662 1.5E-60 T 12-10-2018 IPR001633 EAL domain N288_05275 2e4807a1c3d2da334dc5c587a6122f5e 681 SMART SM00267 247 411 6.9E-8 T 12-10-2018 IPR000160 GGDEF domain N288_05275 2e4807a1c3d2da334dc5c587a6122f5e 681 Pfam PF00990 Diguanylate cyclase, GGDEF domain 260 387 4.7E-12 T 12-10-2018 IPR000160 GGDEF domain N288_05275 2e4807a1c3d2da334dc5c587a6122f5e 681 Gene3D G3DSA:3.30.70.270 260 422 1.2E-17 T 12-10-2018 N288_05275 2e4807a1c3d2da334dc5c587a6122f5e 681 SMART SM00052 420 667 5.0E-82 T 12-10-2018 IPR001633 EAL domain N288_05275 2e4807a1c3d2da334dc5c587a6122f5e 681 Gene3D G3DSA:3.20.20.450 423 676 5.9E-84 T 12-10-2018 IPR035919 EAL domain superfamily N288_05275 2e4807a1c3d2da334dc5c587a6122f5e 681 Pfam PF03707 Bacterial signalling protein N terminal repeat 126 173 3.1E-13 T 12-10-2018 IPR005330 MHYT domain N288_05275 2e4807a1c3d2da334dc5c587a6122f5e 681 Pfam PF03707 Bacterial signalling protein N terminal repeat 63 114 3.2E-18 T 12-10-2018 IPR005330 MHYT domain N288_05275 2e4807a1c3d2da334dc5c587a6122f5e 681 Pfam PF03707 Bacterial signalling protein N terminal repeat 192 246 7.0E-5 T 12-10-2018 IPR005330 MHYT domain N288_16310 77a7d2181fc8b00c1ec7ed485689b557 507 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 30 484 9.0E-160 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 N288_16310 77a7d2181fc8b00c1ec7ed485689b557 507 PIRSF PIRSF005690 12 499 3.3E-145 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 N288_09930 7d6f3cd35ee61e10695988b8f1ed6028 394 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 341 4.8E-128 T 12-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 N288_09930 7d6f3cd35ee61e10695988b8f1ed6028 394 Gene3D G3DSA:2.40.50.140 136 197 5.9E-25 T 12-10-2018 N288_09930 7d6f3cd35ee61e10695988b8f1ed6028 394 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 387 30.455 T 12-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 N288_09930 7d6f3cd35ee61e10695988b8f1ed6028 394 SMART SM00316 133 199 1.1E-10 T 12-10-2018 IPR022967 RNA-binding domain, S1 N288_09930 7d6f3cd35ee61e10695988b8f1ed6028 394 Gene3D G3DSA:3.30.1480.10 1 124 3.8E-49 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 N288_09930 7d6f3cd35ee61e10695988b8f1ed6028 394 Pfam PF00575 S1 RNA binding domain 133 193 2.6E-11 T 12-10-2018 IPR003029 S1 domain GO:0003676 N288_09930 7d6f3cd35ee61e10695988b8f1ed6028 394 Gene3D G3DSA:3.30.300.20 278 391 2.7E-33 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta N288_09930 7d6f3cd35ee61e10695988b8f1ed6028 394 SUPERFAMILY SSF69705 1 126 4.05E-43 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 N288_09930 7d6f3cd35ee61e10695988b8f1ed6028 394 Pfam PF08529 NusA N-terminal domain 4 123 1.6E-43 T 12-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 N288_09930 7d6f3cd35ee61e10695988b8f1ed6028 394 SUPERFAMILY SSF50249 132 198 2.53E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_09930 7d6f3cd35ee61e10695988b8f1ed6028 394 Gene3D G3DSA:3.30.300.20 198 276 1.3E-33 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta N288_09930 7d6f3cd35ee61e10695988b8f1ed6028 394 SUPERFAMILY SSF54814 278 341 1.18E-16 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 N288_09930 7d6f3cd35ee61e10695988b8f1ed6028 394 Pfam PF13184 NusA-like KH domain 229 296 1.6E-27 T 12-10-2018 IPR025249 KH domain, NusA-like GO:0003723 N288_09930 7d6f3cd35ee61e10695988b8f1ed6028 394 SMART SM00322 302 360 8.8 T 12-10-2018 IPR004087 K Homology domain GO:0003676 N288_09930 7d6f3cd35ee61e10695988b8f1ed6028 394 SMART SM00322 229 301 0.0063 T 12-10-2018 IPR004087 K Homology domain GO:0003676 N288_09930 7d6f3cd35ee61e10695988b8f1ed6028 394 SUPERFAMILY SSF54814 199 276 7.85E-30 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 N288_11135 b24015c527b9bec18b9b5aca28bcb7a4 135 SUPERFAMILY SSF55729 19 121 7.98E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_11135 b24015c527b9bec18b9b5aca28bcb7a4 135 Gene3D G3DSA:3.40.630.30 1 135 6.7E-34 T 12-10-2018 N288_11135 b24015c527b9bec18b9b5aca28bcb7a4 135 Pfam PF13673 Acetyltransferase (GNAT) domain 42 121 3.7E-10 T 12-10-2018 IPR000182 GNAT domain N288_04995 e8696bf372754e758aec5c01b9e2ec9c 242 SMART SM00382 28 223 5.6E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_04995 e8696bf372754e758aec5c01b9e2ec9c 242 SUPERFAMILY SSF52540 3 237 9.87E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_04995 e8696bf372754e758aec5c01b9e2ec9c 242 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_04995 e8696bf372754e758aec5c01b9e2ec9c 242 Gene3D G3DSA:3.40.50.300 1 242 2.3E-82 T 12-10-2018 N288_04995 e8696bf372754e758aec5c01b9e2ec9c 242 PIRSF PIRSF039085 1 242 1.6E-118 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 N288_04995 e8696bf372754e758aec5c01b9e2ec9c 242 Pfam PF00005 ABC transporter 19 167 8.8E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_23230 98305ebdac4280f63d001de36d43b9ac 257 Gene3D G3DSA:3.40.50.300 64 249 7.2E-39 T 12-10-2018 N288_23230 98305ebdac4280f63d001de36d43b9ac 257 SMART SM00382 100 232 3.3E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_23230 98305ebdac4280f63d001de36d43b9ac 257 PIRSF PIRSF003073 1 254 1.5E-74 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein N288_23230 98305ebdac4280f63d001de36d43b9ac 257 Pfam PF01695 IstB-like ATP binding protein 57 231 2.0E-49 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 N288_23230 98305ebdac4280f63d001de36d43b9ac 257 SUPERFAMILY SSF52540 66 231 4.05E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_23230 98305ebdac4280f63d001de36d43b9ac 257 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 191 205 5.5E-6 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 N288_23230 98305ebdac4280f63d001de36d43b9ac 257 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 104 122 5.5E-6 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 N288_01220 b2ec9a8ea649cc1cf10a3608fb9481d1 294 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 4 291 1.0E-80 T 12-10-2018 IPR005218 Diacylglycerol/lipid kinase N288_01220 b2ec9a8ea649cc1cf10a3608fb9481d1 294 Pfam PF00781 Diacylglycerol kinase catalytic domain 6 127 5.3E-32 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 N288_01220 b2ec9a8ea649cc1cf10a3608fb9481d1 294 Gene3D G3DSA:2.60.200.40 126 276 4.4E-80 T 12-10-2018 N288_01220 b2ec9a8ea649cc1cf10a3608fb9481d1 294 SUPERFAMILY SSF111331 2 292 2.09E-70 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily N288_01220 b2ec9a8ea649cc1cf10a3608fb9481d1 294 SMART SM00046 5 132 3.6E-18 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 N288_01220 b2ec9a8ea649cc1cf10a3608fb9481d1 294 Gene3D G3DSA:3.40.50.10330 7 125 4.4E-80 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 N288_22405 d5c065ad67cf83268cb76144993fc528 432 Gene3D G3DSA:3.40.630.10 336 429 4.0E-13 T 12-10-2018 N288_22405 d5c065ad67cf83268cb76144993fc528 432 Gene3D G3DSA:3.40.630.10 2 320 8.3E-86 T 12-10-2018 N288_22405 d5c065ad67cf83268cb76144993fc528 432 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 13 417 1.2E-88 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 N288_22405 d5c065ad67cf83268cb76144993fc528 432 SUPERFAMILY SSF55031 226 333 4.58E-23 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_22405 d5c065ad67cf83268cb76144993fc528 432 Pfam PF01546 Peptidase family M20/M25/M40 111 426 2.0E-26 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_22405 d5c065ad67cf83268cb76144993fc528 432 SUPERFAMILY SSF53187 4 425 7.23E-63 T 12-10-2018 N288_22405 d5c065ad67cf83268cb76144993fc528 432 PIRSF PIRSF005962 2 430 1.3E-107 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 N288_22405 d5c065ad67cf83268cb76144993fc528 432 Pfam PF07687 Peptidase dimerisation domain 229 305 1.6E-8 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain N288_01445 2b6f5896a45905c1dc6ebebaec20cf72 183 SUPERFAMILY SSF88946 11 104 2.75E-20 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_01445 2b6f5896a45905c1dc6ebebaec20cf72 183 Gene3D G3DSA:1.10.10.10 109 178 2.7E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_01445 2b6f5896a45905c1dc6ebebaec20cf72 183 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 171 1.8E-30 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_01445 2b6f5896a45905c1dc6ebebaec20cf72 183 SUPERFAMILY SSF88659 111 172 1.1E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_01445 2b6f5896a45905c1dc6ebebaec20cf72 183 Pfam PF08281 Sigma-70, region 4 117 168 2.6E-19 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_01445 2b6f5896a45905c1dc6ebebaec20cf72 183 Gene3D G3DSA:1.10.1740.10 4 103 5.7E-17 T 12-10-2018 N288_01445 2b6f5896a45905c1dc6ebebaec20cf72 183 Pfam PF04542 Sigma-70 region 2 26 93 1.2E-10 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_15990 1ee6c6a127a1c8deb58192c8efe1d1d5 373 Gene3D G3DSA:2.30.40.10 6 367 4.3E-103 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_15990 1ee6c6a127a1c8deb58192c8efe1d1d5 373 SUPERFAMILY SSF51338 1 372 8.51E-25 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_15990 1ee6c6a127a1c8deb58192c8efe1d1d5 373 SUPERFAMILY SSF51556 55 337 6.24E-43 T 12-10-2018 IPR032466 Metal-dependent hydrolase N288_15990 1ee6c6a127a1c8deb58192c8efe1d1d5 373 Pfam PF01979 Amidohydrolase family 53 368 3.6E-17 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 N288_15990 1ee6c6a127a1c8deb58192c8efe1d1d5 373 Gene3D G3DSA:3.20.20.140 56 333 4.3E-103 T 12-10-2018 N288_21920 c845dda6b5496fb80af49444c63febf5 138 SUPERFAMILY SSF57997 23 137 1.54E-13 T 12-10-2018 N288_21920 c845dda6b5496fb80af49444c63febf5 138 Gene3D G3DSA:3.90.20.10 60 138 2.6E-8 T 12-10-2018 N288_21920 c845dda6b5496fb80af49444c63febf5 138 Gene3D G3DSA:3.90.20.10 3 59 5.2E-11 T 12-10-2018 N288_13530 f070b8a70bbbaef7a26f8a95cf0e0217 320 SUPERFAMILY SSF161111 9 229 2.48E-31 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily N288_13530 f070b8a70bbbaef7a26f8a95cf0e0217 320 Pfam PF01545 Cation efflux family 16 224 1.5E-27 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 N288_13530 f070b8a70bbbaef7a26f8a95cf0e0217 320 Gene3D G3DSA:1.20.1510.10 11 227 5.7E-25 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily N288_13530 f070b8a70bbbaef7a26f8a95cf0e0217 320 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 303 1.3E-33 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 N288_13530 f070b8a70bbbaef7a26f8a95cf0e0217 320 SUPERFAMILY SSF160240 231 304 3.01E-10 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 N288_10950 370175019c7be4655c5dce8054d2bec7 464 Pfam PF02225 PA domain 129 213 2.1E-18 T 12-10-2018 IPR003137 PA domain N288_10950 370175019c7be4655c5dce8054d2bec7 464 SUPERFAMILY SSF52025 115 187 1.31E-21 T 12-10-2018 N288_10950 370175019c7be4655c5dce8054d2bec7 464 Gene3D G3DSA:3.40.630.10 63 428 3.7E-140 T 12-10-2018 N288_10950 370175019c7be4655c5dce8054d2bec7 464 SUPERFAMILY SSF53187 39 438 1.51E-65 T 12-10-2018 N288_10950 370175019c7be4655c5dce8054d2bec7 464 Pfam PF04389 Peptidase family M28 241 431 1.2E-46 T 12-10-2018 IPR007484 Peptidase M28 N288_10950 370175019c7be4655c5dce8054d2bec7 464 Gene3D G3DSA:3.50.30.30 103 231 3.7E-140 T 12-10-2018 N288_07995 9452b241dfa882b1661d3c870c1cc9e7 271 Gene3D G3DSA:3.40.710.10 5 263 4.0E-61 T 12-10-2018 N288_07995 9452b241dfa882b1661d3c870c1cc9e7 271 SUPERFAMILY SSF56601 11 239 8.72E-46 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_07995 9452b241dfa882b1661d3c870c1cc9e7 271 Pfam PF13354 Beta-lactamase enzyme family 37 235 6.0E-59 T 12-10-2018 N288_03895 9bf78c4f05d81457b76e051439444746 169 Gene3D G3DSA:3.30.240.20 86 158 6.8E-18 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily N288_03895 9bf78c4f05d81457b76e051439444746 169 Pfam PF04239 Protein of unknown function (DUF421) 93 161 1.2E-10 T 12-10-2018 IPR007353 Protein of unknown function DUF421 N288_05395 2a7dc77f5ade80079b8a3efb1da740d1 248 Gene3D G3DSA:3.40.50.300 1 248 9.2E-78 T 12-10-2018 N288_05395 2a7dc77f5ade80079b8a3efb1da740d1 248 SMART SM00382 26 219 3.5E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_05395 2a7dc77f5ade80079b8a3efb1da740d1 248 Pfam PF00005 ABC transporter 17 171 1.1E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_05395 2a7dc77f5ade80079b8a3efb1da740d1 248 PIRSF PIRSF039085 1 247 8.0E-115 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 N288_05395 2a7dc77f5ade80079b8a3efb1da740d1 248 SUPERFAMILY SSF52540 1 241 2.6E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_05395 2a7dc77f5ade80079b8a3efb1da740d1 248 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_23035 1e7a4c4838fcc95a7164398a1e7bfc0c 787 Gene3D G3DSA:3.20.20.70 341 530 1.0E-10 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_23035 1e7a4c4838fcc95a7164398a1e7bfc0c 787 Pfam PF02638 Glycosyl hydrolase-like 10 353 631 1.4E-21 T 12-10-2018 IPR003790 Glycosyl hydrolase-like 10 N288_23035 1e7a4c4838fcc95a7164398a1e7bfc0c 787 SUPERFAMILY SSF51445 343 550 1.11E-17 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_04035 854127fae2100319bf64fde32b45f134 862 Gene3D G3DSA:3.40.50.300 575 860 4.2E-30 T 12-10-2018 N288_04035 854127fae2100319bf64fde32b45f134 862 SMART SM00487 344 542 1.6E-10 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_04035 854127fae2100319bf64fde32b45f134 862 Pfam PF00271 Helicase conserved C-terminal domain 689 792 4.1E-9 T 12-10-2018 IPR001650 Helicase, C-terminal N288_04035 854127fae2100319bf64fde32b45f134 862 Pfam PF13091 PLD-like domain 40 187 1.3E-7 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 N288_04035 854127fae2100319bf64fde32b45f134 862 Gene3D G3DSA:3.30.870.10 8 201 5.6E-6 T 12-10-2018 N288_04035 854127fae2100319bf64fde32b45f134 862 SMART SM00490 707 792 3.3E-8 T 12-10-2018 IPR001650 Helicase, C-terminal N288_04035 854127fae2100319bf64fde32b45f134 862 SUPERFAMILY SSF52540 466 846 1.69E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_04035 854127fae2100319bf64fde32b45f134 862 SUPERFAMILY SSF52540 308 545 1.26E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_04035 854127fae2100319bf64fde32b45f134 862 Pfam PF00176 SNF2 family N-terminal domain 371 593 1.1E-21 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 N288_04035 854127fae2100319bf64fde32b45f134 862 Gene3D G3DSA:3.40.50.10810 316 558 4.0E-23 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily N288_25980 3b3330258aa70643a435f2335cc2fe7a 285 Pfam PF08535 KorB domain 137 173 5.5E-5 T 12-10-2018 IPR013741 Repressor KorB domain N288_25980 3b3330258aa70643a435f2335cc2fe7a 285 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 21 196 3.8E-62 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 N288_25980 3b3330258aa70643a435f2335cc2fe7a 285 Pfam PF02195 ParB-like nuclease domain 26 113 1.2E-25 T 12-10-2018 IPR003115 ParB/Sulfiredoxin N288_25980 3b3330258aa70643a435f2335cc2fe7a 285 SUPERFAMILY SSF109709 106 216 8.37E-37 T 12-10-2018 N288_25980 3b3330258aa70643a435f2335cc2fe7a 285 SUPERFAMILY SSF110849 25 116 1.62E-27 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily N288_25980 3b3330258aa70643a435f2335cc2fe7a 285 Gene3D G3DSA:3.90.1530.30 38 100 1.7E-25 T 12-10-2018 N288_25980 3b3330258aa70643a435f2335cc2fe7a 285 SMART SM00470 25 114 3.1E-33 T 12-10-2018 IPR003115 ParB/Sulfiredoxin N288_25980 3b3330258aa70643a435f2335cc2fe7a 285 Gene3D G3DSA:1.10.10.2830 101 215 2.1E-40 T 12-10-2018 N288_08975 33b8f11ad98341a457a95e3eca4feb56 303 TIGRFAM TIGR02737 caa3_CtaG: cytochrome c oxidase assembly factor CtaG 4 283 1.7E-130 T 12-10-2018 IPR014108 Cytochrome c oxidase caa3 type assembly factor CtaG N288_08975 33b8f11ad98341a457a95e3eca4feb56 303 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 26 281 8.8E-65 T 12-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related N288_12760 661046e9a625cbc2e47fb055b7b30372 267 SUPERFAMILY SSF161098 7 253 4.11E-48 T 12-10-2018 IPR035906 MetI-like superfamily N288_12760 661046e9a625cbc2e47fb055b7b30372 267 Gene3D G3DSA:1.10.3720.10 6 262 1.8E-39 T 12-10-2018 IPR035906 MetI-like superfamily N288_12760 661046e9a625cbc2e47fb055b7b30372 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 252 9.0E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_20665 9e2dab4cdf8dc30885cf49ca3c129a7a 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 379 2.9E-101 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 N288_20665 9e2dab4cdf8dc30885cf49ca3c129a7a 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 N288_20665 9e2dab4cdf8dc30885cf49ca3c129a7a 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 N288_20665 9e2dab4cdf8dc30885cf49ca3c129a7a 387 Gene3D G3DSA:3.40.50.1970 1 184 2.6E-56 T 12-10-2018 N288_20665 9e2dab4cdf8dc30885cf49ca3c129a7a 387 SUPERFAMILY SSF56796 1 385 2.36E-118 T 12-10-2018 N288_20665 9e2dab4cdf8dc30885cf49ca3c129a7a 387 Gene3D G3DSA:1.20.1090.10 185 386 3.8E-47 T 12-10-2018 N288_15515 11e3c49d801ae5aed4ec188bda301690 225 Pfam PF00583 Acetyltransferase (GNAT) family 30 148 1.2E-12 T 12-10-2018 IPR000182 GNAT domain N288_15515 11e3c49d801ae5aed4ec188bda301690 225 SUPERFAMILY SSF55729 20 149 1.32E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_15515 11e3c49d801ae5aed4ec188bda301690 225 Gene3D G3DSA:3.40.630.30 15 225 2.4E-55 T 12-10-2018 N288_02620 57b9428035454350537e8a85099d279f 239 Pfam PF12650 Domain of unknown function (DUF3784) 10 101 1.4E-13 T 12-10-2018 IPR017259 Uncharacterised conserved protein UCP037672 N288_02620 57b9428035454350537e8a85099d279f 239 Pfam PF10882 Bacterial PH domain 140 226 6.1E-5 T 12-10-2018 IPR027783 Bacterial Pleckstrin homology domain-related N288_02520 f0d44e73bc17cfaa41a16e5fc306ef3e 278 Pfam PF00583 Acetyltransferase (GNAT) family 179 269 4.5E-7 T 12-10-2018 IPR000182 GNAT domain N288_02520 f0d44e73bc17cfaa41a16e5fc306ef3e 278 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 14 60 4.7E-6 T 12-10-2018 IPR004176 Clp, N-terminal N288_02520 f0d44e73bc17cfaa41a16e5fc306ef3e 278 Gene3D G3DSA:3.40.630.30 154 268 4.4E-13 T 12-10-2018 N288_02520 f0d44e73bc17cfaa41a16e5fc306ef3e 278 SUPERFAMILY SSF55729 156 267 1.71E-14 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_02520 f0d44e73bc17cfaa41a16e5fc306ef3e 278 Gene3D G3DSA:1.10.1780.10 1 126 6.3E-15 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 N288_02520 f0d44e73bc17cfaa41a16e5fc306ef3e 278 SUPERFAMILY SSF81923 2 112 2.16E-10 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 N288_00745 f29cb9fc2064c33391c8e04596400cd6 208 Gene3D G3DSA:2.40.50.620 33 96 4.3E-15 T 12-10-2018 N288_00745 f29cb9fc2064c33391c8e04596400cd6 208 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 12-10-2018 IPR019926 Ribosomal protein L3, conserved site N288_00745 f29cb9fc2064c33391c8e04596400cd6 208 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 206 39.223 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00745 f29cb9fc2064c33391c8e04596400cd6 208 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 203 3.3E-86 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00745 f29cb9fc2064c33391c8e04596400cd6 208 Gene3D G3DSA:2.40.30.10 133 208 5.8E-17 T 12-10-2018 N288_00745 f29cb9fc2064c33391c8e04596400cd6 208 Pfam PF00297 Ribosomal protein L3 88 181 1.6E-16 T 12-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00745 f29cb9fc2064c33391c8e04596400cd6 208 SUPERFAMILY SSF50447 1 207 1.24E-80 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily N288_22845 0e451dfcce38c16cac5e01fb44826a6e 586 Gene3D G3DSA:3.30.450.20 182 291 1.2E-9 T 12-10-2018 N288_22845 0e451dfcce38c16cac5e01fb44826a6e 586 Gene3D G3DSA:1.10.287.130 312 419 3.3E-8 T 12-10-2018 N288_22845 0e451dfcce38c16cac5e01fb44826a6e 586 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 473 569 3.4E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_22845 0e451dfcce38c16cac5e01fb44826a6e 586 Pfam PF06580 Histidine kinase 378 454 6.5E-22 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 N288_22845 0e451dfcce38c16cac5e01fb44826a6e 586 Pfam PF02743 Cache domain 37 272 5.3E-19 T 12-10-2018 IPR033479 Double Cache domain 1 N288_22845 0e451dfcce38c16cac5e01fb44826a6e 586 Gene3D G3DSA:3.30.565.10 438 577 1.4E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_22845 0e451dfcce38c16cac5e01fb44826a6e 586 Pfam PF00672 HAMP domain 314 361 3.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_22845 0e451dfcce38c16cac5e01fb44826a6e 586 SUPERFAMILY SSF158472 314 364 3.14E-10 T 12-10-2018 N288_22845 0e451dfcce38c16cac5e01fb44826a6e 586 SMART SM00387 468 572 7.9E-5 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_22845 0e451dfcce38c16cac5e01fb44826a6e 586 SMART SM00304 313 365 2.5E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_22845 0e451dfcce38c16cac5e01fb44826a6e 586 SUPERFAMILY SSF55874 441 570 2.23E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_08770 4784d8306d43d5bae12d545e25b85e90 184 PIRSF PIRSF004749 2 184 1.2E-47 T 12-10-2018 IPR023635 Peptide deformylase N288_08770 4784d8306d43d5bae12d545e25b85e90 184 Hamap MF_00163 Peptide deformylase [def]. 3 182 26.919 T 12-10-2018 IPR023635 Peptide deformylase N288_08770 4784d8306d43d5bae12d545e25b85e90 184 Gene3D G3DSA:3.90.45.10 1 184 6.1E-65 T 12-10-2018 IPR036821 Peptide deformylase superfamily N288_08770 4784d8306d43d5bae12d545e25b85e90 184 SUPERFAMILY SSF56420 2 179 1.57E-59 T 12-10-2018 IPR036821 Peptide deformylase superfamily N288_08770 4784d8306d43d5bae12d545e25b85e90 184 Pfam PF01327 Polypeptide deformylase 5 171 2.4E-45 T 12-10-2018 IPR023635 Peptide deformylase N288_08770 4784d8306d43d5bae12d545e25b85e90 184 PRINTS PR01576 Peptide deformylase signature 121 139 7.5E-30 T 12-10-2018 IPR023635 Peptide deformylase N288_08770 4784d8306d43d5bae12d545e25b85e90 184 PRINTS PR01576 Peptide deformylase signature 140 169 7.5E-30 T 12-10-2018 IPR023635 Peptide deformylase N288_08770 4784d8306d43d5bae12d545e25b85e90 184 PRINTS PR01576 Peptide deformylase signature 47 76 7.5E-30 T 12-10-2018 IPR023635 Peptide deformylase N288_08770 4784d8306d43d5bae12d545e25b85e90 184 PRINTS PR01576 Peptide deformylase signature 108 119 7.5E-30 T 12-10-2018 IPR023635 Peptide deformylase N288_08770 4784d8306d43d5bae12d545e25b85e90 184 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 178 3.8E-50 T 12-10-2018 IPR023635 Peptide deformylase N288_23780 8ff709e7b580cb1cd97ff2940da64d03 146 Pfam PF02502 Ribose/Galactose Isomerase 3 140 2.2E-56 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 N288_23780 8ff709e7b580cb1cd97ff2940da64d03 146 SUPERFAMILY SSF89623 1 144 2.22E-58 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 N288_23780 8ff709e7b580cb1cd97ff2940da64d03 146 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 145 2.9E-59 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 N288_23780 8ff709e7b580cb1cd97ff2940da64d03 146 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 142 1.4E-52 T 12-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 N288_23780 8ff709e7b580cb1cd97ff2940da64d03 146 PIRSF PIRSF005384 1 146 3.9E-57 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 N288_23780 8ff709e7b580cb1cd97ff2940da64d03 146 Gene3D G3DSA:3.40.1400.10 1 146 1.4E-59 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 N288_13915 7b8e222a49150acb2a98ccdd4c410b02 272 SUPERFAMILY SSF54593 149 271 3.3E-16 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_13915 7b8e222a49150acb2a98ccdd4c410b02 272 SUPERFAMILY SSF54593 9 173 2.69E-16 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_13915 7b8e222a49150acb2a98ccdd4c410b02 272 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 149 266 6.1E-8 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_13915 7b8e222a49150acb2a98ccdd4c410b02 272 Gene3D G3DSA:3.10.180.10 10 123 1.5E-6 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_13915 7b8e222a49150acb2a98ccdd4c410b02 272 Gene3D G3DSA:3.10.180.10 139 271 1.9E-13 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_19475 8627f88f7e28e39718a53b34bd15095c 162 Gene3D G3DSA:1.10.4010.10 1 162 1.3E-13 T 12-10-2018 N288_19475 8627f88f7e28e39718a53b34bd15095c 162 SUPERFAMILY SSF101386 2 162 3.71E-41 T 12-10-2018 N288_19475 8627f88f7e28e39718a53b34bd15095c 162 PIRSF PIRSF030140 1 162 1.5E-55 T 12-10-2018 IPR016947 Uncharacterised phage-associated protein UCP030140 N288_19475 8627f88f7e28e39718a53b34bd15095c 162 Pfam PF08761 dUTPase 2 162 1.2E-48 T 12-10-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 N288_25485 a39cdec21ae3302c50d4ac5a17eaa90c 107 TIGRFAM TIGR04104 cxxc_20_cxxc: cxxc_20_cxxc protein 8 98 4.0E-15 T 12-10-2018 IPR026369 CxxC-20-CxxC protein N288_07155 996320ed32d39b722e4a2041b4ac86ce 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 275 5.4E-39 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 N288_21425 18d555911a75a84ad99e8f4495fa206a 191 SUPERFAMILY SSF64307 2 77 7.59E-24 T 12-10-2018 IPR036868 TusA-like domain superfamily N288_21425 18d555911a75a84ad99e8f4495fa206a 191 Pfam PF01206 Sulfurtransferase TusA 9 77 8.0E-22 T 12-10-2018 IPR001455 TusA-like domain N288_21425 18d555911a75a84ad99e8f4495fa206a 191 Gene3D G3DSA:3.40.250.10 90 184 3.8E-26 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_21425 18d555911a75a84ad99e8f4495fa206a 191 Pfam PF00581 Rhodanese-like domain 94 183 1.7E-15 T 12-10-2018 IPR001763 Rhodanese-like domain N288_21425 18d555911a75a84ad99e8f4495fa206a 191 ProSitePatterns PS00380 Rhodanese signature 1. 118 129 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 N288_21425 18d555911a75a84ad99e8f4495fa206a 191 SMART SM00450 93 188 8.0E-19 T 12-10-2018 IPR001763 Rhodanese-like domain N288_21425 18d555911a75a84ad99e8f4495fa206a 191 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 12-10-2018 IPR001455 TusA-like domain N288_21425 18d555911a75a84ad99e8f4495fa206a 191 Gene3D G3DSA:3.30.110.40 2 79 2.0E-29 T 12-10-2018 IPR036868 TusA-like domain superfamily N288_21425 18d555911a75a84ad99e8f4495fa206a 191 SUPERFAMILY SSF52821 82 183 8.12E-31 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_19590 c24370849eb3ec05f1ffbca2a0b6aa40 158 SUPERFAMILY SSF54637 9 146 8.34E-24 T 12-10-2018 IPR029069 HotDog domain superfamily N288_19590 c24370849eb3ec05f1ffbca2a0b6aa40 158 Pfam PF01575 MaoC like domain 25 127 4.4E-7 T 12-10-2018 IPR002539 MaoC-like dehydratase domain N288_19590 c24370849eb3ec05f1ffbca2a0b6aa40 158 Gene3D G3DSA:3.10.129.10 10 150 1.2E-25 T 12-10-2018 N288_01410 1e99ca2d58213a0c5f7fb677273f0403 490 ProSitePatterns PS01130 SLC26A transporters signature. 43 64 - T 12-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 N288_01410 1e99ca2d58213a0c5f7fb677273f0403 490 SUPERFAMILY SSF52091 394 481 1.0E-11 T 12-10-2018 IPR036513 STAS domain superfamily N288_01410 1e99ca2d58213a0c5f7fb677273f0403 490 Pfam PF00916 Sulfate permease family 164 355 5.5E-31 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 N288_01410 1e99ca2d58213a0c5f7fb677273f0403 490 Pfam PF00916 Sulfate permease family 15 141 1.6E-27 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 N288_01410 1e99ca2d58213a0c5f7fb677273f0403 490 Gene3D G3DSA:3.30.750.24 385 481 2.7E-28 T 12-10-2018 IPR036513 STAS domain superfamily N288_01410 1e99ca2d58213a0c5f7fb677273f0403 490 Pfam PF01740 STAS domain 398 481 2.1E-6 T 12-10-2018 IPR002645 STAS domain N288_05020 d227e9db7c646d58f7a0549dc3f5770e 335 SUPERFAMILY SSF56235 93 222 5.4E-13 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_05020 d227e9db7c646d58f7a0549dc3f5770e 335 Gene3D G3DSA:3.60.60.10 89 306 2.6E-28 T 12-10-2018 N288_05020 d227e9db7c646d58f7a0549dc3f5770e 335 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 98 304 1.5E-43 T 12-10-2018 IPR005079 Peptidase C45 N288_01825 83b73360ba1d2b2d8633f9aa0ea789f3 485 Gene3D G3DSA:3.90.1300.10 2 484 2.6E-202 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 N288_01825 83b73360ba1d2b2d8633f9aa0ea789f3 485 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 477 6.3E-203 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 N288_01825 83b73360ba1d2b2d8633f9aa0ea789f3 485 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 477 96.132 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 N288_01825 83b73360ba1d2b2d8633f9aa0ea789f3 485 Pfam PF01425 Amidase 24 465 2.3E-163 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 N288_01825 83b73360ba1d2b2d8633f9aa0ea789f3 485 SUPERFAMILY SSF75304 1 483 2.75E-167 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 N288_01825 83b73360ba1d2b2d8633f9aa0ea789f3 485 ProSitePatterns PS00571 Amidases signature. 152 183 - T 12-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 N288_08190 456b529d7fb59e99a9462d01f6cd4ac1 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 4 12 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 N288_08190 456b529d7fb59e99a9462d01f6cd4ac1 256 Gene3D G3DSA:3.20.20.140 1 256 7.8E-49 T 12-10-2018 N288_08190 456b529d7fb59e99a9462d01f6cd4ac1 256 SUPERFAMILY SSF51556 4 256 8.6E-47 T 12-10-2018 IPR032466 Metal-dependent hydrolase N288_08190 456b529d7fb59e99a9462d01f6cd4ac1 256 PIRSF PIRSF005902 1 256 8.9E-47 T 12-10-2018 IPR001130 TatD family GO:0016788 N288_08190 456b529d7fb59e99a9462d01f6cd4ac1 256 Pfam PF01026 TatD related DNase 5 254 8.1E-39 T 12-10-2018 IPR001130 TatD family GO:0016788 N288_20410 4c0da4cbcba1ea646757ba1afd108ecc 269 Pfam PF00561 alpha/beta hydrolase fold 20 255 1.1E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_20410 4c0da4cbcba1ea646757ba1afd108ecc 269 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 10 267 36.009 T 12-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 N288_20410 4c0da4cbcba1ea646757ba1afd108ecc 269 Gene3D G3DSA:3.40.50.1820 8 268 6.1E-67 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_20410 4c0da4cbcba1ea646757ba1afd108ecc 269 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 20 267 2.3E-84 T 12-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 N288_20410 4c0da4cbcba1ea646757ba1afd108ecc 269 SUPERFAMILY SSF53474 6 266 7.43E-55 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_20410 4c0da4cbcba1ea646757ba1afd108ecc 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 1.1E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_20410 4c0da4cbcba1ea646757ba1afd108ecc 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 1.1E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_20410 4c0da4cbcba1ea646757ba1afd108ecc 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 1.1E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_10795 b3550fdceecfded7a68f47c79799fccc 218 Pfam PF01081 KDPG and KHG aldolase 8 200 3.2E-42 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 N288_10795 b3550fdceecfded7a68f47c79799fccc 218 Gene3D G3DSA:3.20.20.70 1 217 1.1E-72 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_10795 b3550fdceecfded7a68f47c79799fccc 218 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 8 208 5.0E-53 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 N288_10795 b3550fdceecfded7a68f47c79799fccc 218 SUPERFAMILY SSF51569 2 210 5.31E-63 T 12-10-2018 N288_21355 4cd53a15f01640d03c68af8bd73c12e9 421 PRINTS PR00342 Rhesus blood group protein signature 200 218 2.6E-8 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 N288_21355 4cd53a15f01640d03c68af8bd73c12e9 421 PRINTS PR00342 Rhesus blood group protein signature 163 178 2.6E-8 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 N288_21355 4cd53a15f01640d03c68af8bd73c12e9 421 PRINTS PR00342 Rhesus blood group protein signature 48 65 2.6E-8 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 N288_21355 4cd53a15f01640d03c68af8bd73c12e9 421 PRINTS PR00342 Rhesus blood group protein signature 265 278 2.6E-8 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 N288_21355 4cd53a15f01640d03c68af8bd73c12e9 421 SUPERFAMILY SSF111352 7 388 1.44E-110 T 12-10-2018 N288_21355 4cd53a15f01640d03c68af8bd73c12e9 421 Pfam PF00909 Ammonium Transporter Family 10 408 1.5E-118 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 N288_21355 4cd53a15f01640d03c68af8bd73c12e9 421 Gene3D G3DSA:1.10.3430.10 2 419 8.9E-138 T 12-10-2018 IPR029020 Ammonium/urea transporter N288_21355 4cd53a15f01640d03c68af8bd73c12e9 421 TIGRFAM TIGR00836 amt: ammonium transporter 9 408 1.7E-122 T 12-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 N288_21355 4cd53a15f01640d03c68af8bd73c12e9 421 ProSitePatterns PS01219 Ammonium transporters signature. 156 181 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 N288_12910 606333e55d885e134127205e58014981 241 Pfam PF04055 Radical SAM superfamily 28 170 1.4E-12 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 N288_12910 606333e55d885e134127205e58014981 241 Gene3D G3DSA:3.20.20.70 4 234 1.2E-29 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_12910 606333e55d885e134127205e58014981 241 SUPERFAMILY SSF102114 26 117 4.19E-15 T 12-10-2018 N288_12910 606333e55d885e134127205e58014981 241 Pfam PF13394 4Fe-4S single cluster domain 26 111 1.5E-11 T 12-10-2018 N288_12910 606333e55d885e134127205e58014981 241 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 4 238 36.151 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 N288_12910 606333e55d885e134127205e58014981 241 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 3 241 5.5E-113 T 12-10-2018 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 N288_12910 606333e55d885e134127205e58014981 241 PIRSF PIRSF000370 2 241 3.0E-52 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 N288_12090 8492182788773eec3f9ad30f81857d06 434 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 209 238 4.5E-8 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 N288_12090 8492182788773eec3f9ad30f81857d06 434 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 322 351 4.5E-8 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 N288_12090 8492182788773eec3f9ad30f81857d06 434 SMART SM00283 202 434 3.3E-25 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_12090 8492182788773eec3f9ad30f81857d06 434 Pfam PF11563 Protoglobin 33 184 6.4E-41 T 12-10-2018 N288_12090 8492182788773eec3f9ad30f81857d06 434 SUPERFAMILY SSF46458 37 178 3.74E-33 T 12-10-2018 IPR009050 Globin-like superfamily N288_12090 8492182788773eec3f9ad30f81857d06 434 SUPERFAMILY SSF58104 201 427 5.36E-50 T 12-10-2018 N288_12090 8492182788773eec3f9ad30f81857d06 434 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 267 402 7.2E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_12090 8492182788773eec3f9ad30f81857d06 434 Gene3D G3DSA:1.10.287.950 214 434 1.5E-42 T 12-10-2018 N288_12090 8492182788773eec3f9ad30f81857d06 434 Gene3D G3DSA:1.10.490.10 27 179 4.2E-37 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 N288_22240 4dd1ee17167b9edd02e67d5fa863de96 162 Pfam PF04542 Sigma-70 region 2 7 74 6.7E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_22240 4dd1ee17167b9edd02e67d5fa863de96 162 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 155 1.3E-16 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_22240 4dd1ee17167b9edd02e67d5fa863de96 162 Gene3D G3DSA:1.10.10.10 26 160 1.4E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_22240 4dd1ee17167b9edd02e67d5fa863de96 162 SUPERFAMILY SSF88659 101 156 5.76E-9 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_22240 4dd1ee17167b9edd02e67d5fa863de96 162 SUPERFAMILY SSF88946 3 73 4.55E-12 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_05405 2df226b5f17340ce630da121c43620f1 82 Pfam PF04304 Protein of unknown function (DUF454) 1 78 2.4E-14 T 12-10-2018 IPR007401 Protein of unknown function DUF454 N288_19495 308c7eb3b58c94a81eed9f1dcbb677b1 119 Gene3D G3DSA:1.10.1900.20 56 118 1.7E-28 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_19495 308c7eb3b58c94a81eed9f1dcbb677b1 119 Pfam PF00453 Ribosomal protein L20 3 109 9.9E-51 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_19495 308c7eb3b58c94a81eed9f1dcbb677b1 119 Gene3D G3DSA:1.10.720.90 2 55 1.5E-27 T 12-10-2018 N288_19495 308c7eb3b58c94a81eed9f1dcbb677b1 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.638 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_19495 308c7eb3b58c94a81eed9f1dcbb677b1 119 SUPERFAMILY SSF74731 2 116 2.75E-51 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_19495 308c7eb3b58c94a81eed9f1dcbb677b1 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_19495 308c7eb3b58c94a81eed9f1dcbb677b1 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 5.9E-52 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_19495 308c7eb3b58c94a81eed9f1dcbb677b1 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.4E-41 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_19495 308c7eb3b58c94a81eed9f1dcbb677b1 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.4E-41 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_19495 308c7eb3b58c94a81eed9f1dcbb677b1 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.4E-41 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_19495 308c7eb3b58c94a81eed9f1dcbb677b1 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 1.0E-13 T 12-10-2018 N288_23530 da166556b10b189c1b83b10d6dea5807 144 SUPERFAMILY SSF54637 1 138 3.14E-49 T 12-10-2018 IPR029069 HotDog domain superfamily N288_23530 da166556b10b189c1b83b10d6dea5807 144 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 141 35.511 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 N288_23530 da166556b10b189c1b83b10d6dea5807 144 Gene3D G3DSA:3.10.129.10 1 144 3.1E-61 T 12-10-2018 N288_23530 da166556b10b189c1b83b10d6dea5807 144 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 138 6.0E-60 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 N288_23530 da166556b10b189c1b83b10d6dea5807 144 Pfam PF07977 FabA-like domain 11 134 4.6E-37 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 N288_19260 ec8b3571bdd8535d0b262ef08f67f561 192 SUPERFAMILY SSF52016 1 189 6.28E-57 T 12-10-2018 N288_19260 ec8b3571bdd8535d0b262ef08f67f561 192 Gene3D G3DSA:3.20.19.10 1 173 1.6E-70 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 N288_19260 ec8b3571bdd8535d0b262ef08f67f561 192 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 185 2.5E-82 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 N288_19260 ec8b3571bdd8535d0b262ef08f67f561 192 Pfam PF00694 Aconitase C-terminal domain 2 122 9.1E-35 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 N288_19260 ec8b3571bdd8535d0b262ef08f67f561 192 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 192 38.224 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 N288_17625 20e3832ba76ce01540cffd8a6e8c3108 489 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 1 480 86.13 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 N288_17625 20e3832ba76ce01540cffd8a6e8c3108 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 211 228 9.7E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 N288_17625 20e3832ba76ce01540cffd8a6e8c3108 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 229 245 9.7E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 N288_17625 20e3832ba76ce01540cffd8a6e8c3108 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 320 346 9.7E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 N288_17625 20e3832ba76ce01540cffd8a6e8c3108 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 135 148 9.7E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 N288_17625 20e3832ba76ce01540cffd8a6e8c3108 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 159 187 9.7E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 N288_17625 20e3832ba76ce01540cffd8a6e8c3108 489 SUPERFAMILY SSF51735 2 182 4.72E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_17625 20e3832ba76ce01540cffd8a6e8c3108 489 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 1 179 4.3E-63 T 12-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 N288_17625 20e3832ba76ce01540cffd8a6e8c3108 489 Gene3D G3DSA:3.30.360.10 168 480 2.7E-124 T 12-10-2018 N288_17625 20e3832ba76ce01540cffd8a6e8c3108 489 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 182 478 9.8E-117 T 12-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 N288_17625 20e3832ba76ce01540cffd8a6e8c3108 489 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 1 479 2.5E-200 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 N288_17625 20e3832ba76ce01540cffd8a6e8c3108 489 SUPERFAMILY SSF55347 174 479 1.24E-112 T 12-10-2018 N288_17625 20e3832ba76ce01540cffd8a6e8c3108 489 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 169 175 - T 12-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 N288_17625 20e3832ba76ce01540cffd8a6e8c3108 489 Gene3D G3DSA:3.40.50.720 1 167 2.8E-60 T 12-10-2018 N288_17625 20e3832ba76ce01540cffd8a6e8c3108 489 PIRSF PIRSF000110 1 482 6.5E-189 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 N288_18280 387db4f59e1c3d96e01ccfb91c397c44 287 Gene3D G3DSA:1.10.3470.10 96 277 8.9E-10 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_18280 387db4f59e1c3d96e01ccfb91c397c44 287 SUPERFAMILY SSF81345 4 268 4.58E-37 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_18280 387db4f59e1c3d96e01ccfb91c397c44 287 Pfam PF00950 ABC 3 transport family 7 270 1.1E-66 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 N288_08700 6b95c546c046a74cf94b7fb944a268cf 373 SUPERFAMILY SSF55031 176 281 1.96E-28 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_08700 6b95c546c046a74cf94b7fb944a268cf 373 Hamap MF_01692 N-acetyldiaminopimelate deacetylase. 1 370 62.573 T 12-10-2018 IPR023905 Acetyldiaminopimelate deacetylase GO:0009089|GO:0050118 KEGG: 00300+3.5.1.47|MetaCyc: PWY-2941 N288_08700 6b95c546c046a74cf94b7fb944a268cf 373 PIRSF PIRSF005962 1 373 3.4E-109 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 N288_08700 6b95c546c046a74cf94b7fb944a268cf 373 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 5 359 2.5E-85 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 N288_08700 6b95c546c046a74cf94b7fb944a268cf 373 SUPERFAMILY SSF53187 2 367 6.68E-67 T 12-10-2018 N288_08700 6b95c546c046a74cf94b7fb944a268cf 373 Pfam PF01546 Peptidase family M20/M25/M40 65 368 1.5E-24 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_08700 6b95c546c046a74cf94b7fb944a268cf 373 Gene3D G3DSA:3.30.70.360 171 285 1.5E-118 T 12-10-2018 N288_08700 6b95c546c046a74cf94b7fb944a268cf 373 Gene3D G3DSA:3.40.630.10 5 356 1.5E-118 T 12-10-2018 N288_08700 6b95c546c046a74cf94b7fb944a268cf 373 Pfam PF07687 Peptidase dimerisation domain 178 267 3.5E-10 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain N288_23315 c3626bd49307edc7dbe73708f64b0b44 214 Pfam PF02397 Bacterial sugar transferase 14 187 1.8E-63 T 12-10-2018 IPR003362 Bacterial sugar transferase N288_09530 bfe548b13999aa0f0b5c204f66501a04 311 Pfam PF13732 Domain of unknown function (DUF4162) 214 305 1.5E-6 T 12-10-2018 IPR025302 Domain of unknown function DUF4162 N288_09530 bfe548b13999aa0f0b5c204f66501a04 311 SMART SM00382 26 215 2.3E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_09530 bfe548b13999aa0f0b5c204f66501a04 311 Gene3D G3DSA:3.40.50.300 1 238 4.3E-66 T 12-10-2018 N288_09530 bfe548b13999aa0f0b5c204f66501a04 311 Pfam PF00005 ABC transporter 17 160 6.9E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_09530 bfe548b13999aa0f0b5c204f66501a04 311 SUPERFAMILY SSF52540 2 222 2.66E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_02105 49e26c636f284107eaace408c7420f68 299 SUPERFAMILY SSF48150 115 297 7.33E-41 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 N288_02105 49e26c636f284107eaace408c7420f68 299 SMART SM00478 136 298 1.1E-16 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 N288_02105 49e26c636f284107eaace408c7420f68 299 Gene3D G3DSA:1.10.340.30 124 245 1.8E-37 T 12-10-2018 N288_02105 49e26c636f284107eaace408c7420f68 299 Gene3D G3DSA:1.10.1670.40 104 296 1.8E-37 T 12-10-2018 N288_02105 49e26c636f284107eaace408c7420f68 299 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 132 282 7.4E-15 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 N288_00310 39206d56d35ff57d9b14011086c3f38c 276 SUPERFAMILY SSF46785 3 72 1.81E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_00310 39206d56d35ff57d9b14011086c3f38c 276 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 4 271 8.6E-125 T 12-10-2018 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 N288_00310 39206d56d35ff57d9b14011086c3f38c 276 Pfam PF00156 Phosphoribosyl transferase domain 109 260 6.3E-23 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 N288_00310 39206d56d35ff57d9b14011086c3f38c 276 SUPERFAMILY SSF53271 95 259 4.97E-40 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like N288_00310 39206d56d35ff57d9b14011086c3f38c 276 Gene3D G3DSA:1.10.10.10 2 73 1.3E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_00310 39206d56d35ff57d9b14011086c3f38c 276 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 10 72 4.0E-25 T 12-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 N288_00310 39206d56d35ff57d9b14011086c3f38c 276 Pfam PF09182 Bacterial purine repressor, N-terminal 5 72 5.5E-32 T 12-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 N288_00310 39206d56d35ff57d9b14011086c3f38c 276 Gene3D G3DSA:3.40.50.2020 75 275 1.8E-60 T 12-10-2018 N288_07610 03d311eb5d0997d5c1fdb6854a7752c9 329 Gene3D G3DSA:3.40.50.620 4 323 7.8E-141 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_07610 03d311eb5d0997d5c1fdb6854a7752c9 329 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 325 42.957 T 12-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 N288_07610 03d311eb5d0997d5c1fdb6854a7752c9 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 139 160 8.5E-30 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 N288_07610 03d311eb5d0997d5c1fdb6854a7752c9 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 8.5E-30 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 N288_07610 03d311eb5d0997d5c1fdb6854a7752c9 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 8.5E-30 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 N288_07610 03d311eb5d0997d5c1fdb6854a7752c9 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 192 202 8.5E-30 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 N288_07610 03d311eb5d0997d5c1fdb6854a7752c9 329 SUPERFAMILY SSF52374 2 324 1.18E-100 T 12-10-2018 N288_07610 03d311eb5d0997d5c1fdb6854a7752c9 329 Gene3D G3DSA:1.10.240.10 183 293 7.8E-141 T 12-10-2018 N288_07610 03d311eb5d0997d5c1fdb6854a7752c9 329 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 19 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_07610 03d311eb5d0997d5c1fdb6854a7752c9 329 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 324 8.8E-125 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 N288_07610 03d311eb5d0997d5c1fdb6854a7752c9 329 Pfam PF00579 tRNA synthetases class I (W and Y) 3 277 2.3E-84 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_24515 799e001e77fcda6d92d56aed95477113 399 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_24515 799e001e77fcda6d92d56aed95477113 399 Pfam PF07690 Major Facilitator Superfamily 12 341 5.6E-48 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_24515 799e001e77fcda6d92d56aed95477113 399 Gene3D G3DSA:1.20.1250.20 2 391 5.0E-71 T 12-10-2018 N288_24515 799e001e77fcda6d92d56aed95477113 399 PRINTS PR01035 Tetracycline resistance protein signature 17 33 8.4E-18 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 N288_24515 799e001e77fcda6d92d56aed95477113 399 PRINTS PR01035 Tetracycline resistance protein signature 334 357 8.4E-18 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 N288_24515 799e001e77fcda6d92d56aed95477113 399 PRINTS PR01035 Tetracycline resistance protein signature 132 154 8.4E-18 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 N288_24515 799e001e77fcda6d92d56aed95477113 399 PRINTS PR01035 Tetracycline resistance protein signature 160 180 8.4E-18 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 N288_24515 799e001e77fcda6d92d56aed95477113 399 SUPERFAMILY SSF103473 3 390 2.49E-70 T 12-10-2018 IPR036259 MFS transporter superfamily N288_12295 90167d74d4159b9105b03212b22c44ce 539 Pfam PF00005 ABC transporter 335 468 5.8E-15 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_12295 90167d74d4159b9105b03212b22c44ce 539 Pfam PF00005 ABC transporter 18 184 2.6E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_12295 90167d74d4159b9105b03212b22c44ce 539 SUPERFAMILY SSF52540 297 530 1.73E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_12295 90167d74d4159b9105b03212b22c44ce 539 Gene3D G3DSA:3.40.50.300 1 281 2.6E-57 T 12-10-2018 N288_12295 90167d74d4159b9105b03212b22c44ce 539 SUPERFAMILY SSF52540 2 251 2.63E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_12295 90167d74d4159b9105b03212b22c44ce 539 Pfam PF12848 ABC transporter 224 303 1.3E-19 T 12-10-2018 IPR032781 ABC-transporter extension domain N288_12295 90167d74d4159b9105b03212b22c44ce 539 SMART SM00382 344 514 0.19 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_12295 90167d74d4159b9105b03212b22c44ce 539 SMART SM00382 26 228 1.9E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_12295 90167d74d4159b9105b03212b22c44ce 539 Gene3D G3DSA:3.40.50.300 284 539 4.3E-43 T 12-10-2018 N288_04500 59dc901aa1de7fc484b8313effc3509a 463 Gene3D G3DSA:3.30.930.10 106 462 2.1E-112 T 12-10-2018 N288_04500 59dc901aa1de7fc484b8313effc3509a 463 SUPERFAMILY SSF55681 102 461 2.49E-97 T 12-10-2018 N288_04500 59dc901aa1de7fc484b8313effc3509a 463 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 457 4.3E-86 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_04500 59dc901aa1de7fc484b8313effc3509a 463 Gene3D G3DSA:2.40.50.140 2 105 1.0E-16 T 12-10-2018 N288_04500 59dc901aa1de7fc484b8313effc3509a 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 221 234 7.0E-13 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_04500 59dc901aa1de7fc484b8313effc3509a 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 205 217 7.0E-13 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_04500 59dc901aa1de7fc484b8313effc3509a 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 418 432 7.0E-13 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_04500 59dc901aa1de7fc484b8313effc3509a 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 378 394 7.0E-13 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_04500 59dc901aa1de7fc484b8313effc3509a 463 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 4 463 8.0E-188 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 N288_04500 59dc901aa1de7fc484b8313effc3509a 463 SUPERFAMILY SSF50249 14 102 1.3E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_04500 59dc901aa1de7fc484b8313effc3509a 463 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 463 44.966 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 N288_22155 982f227028685b85c550361be7ba5d41 784 ProSitePatterns PS01312 SecA family signature. 480 495 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 N288_22155 982f227028685b85c550361be7ba5d41 784 Pfam PF07517 SecA DEAD-like domain 6 381 2.4E-120 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 N288_22155 982f227028685b85c550361be7ba5d41 784 Hamap MF_01382 Protein translocase subunit SecA [secA]. 3 779 18.024 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 N288_22155 982f227028685b85c550361be7ba5d41 784 PRINTS PR00906 SecA protein signature 393 406 1.2E-63 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 N288_22155 982f227028685b85c550361be7ba5d41 784 PRINTS PR00906 SecA protein signature 99 113 1.2E-63 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 N288_22155 982f227028685b85c550361be7ba5d41 784 PRINTS PR00906 SecA protein signature 115 125 1.2E-63 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 N288_22155 982f227028685b85c550361be7ba5d41 784 PRINTS PR00906 SecA protein signature 61 85 1.2E-63 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 N288_22155 982f227028685b85c550361be7ba5d41 784 PRINTS PR00906 SecA protein signature 168 188 1.2E-63 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 N288_22155 982f227028685b85c550361be7ba5d41 784 PRINTS PR00906 SecA protein signature 356 373 1.2E-63 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 N288_22155 982f227028685b85c550361be7ba5d41 784 PRINTS PR00906 SecA protein signature 319 341 1.2E-63 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 N288_22155 982f227028685b85c550361be7ba5d41 784 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 496 1.4E-212 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 N288_22155 982f227028685b85c550361be7ba5d41 784 SUPERFAMILY SSF52540 4 395 7.05E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_22155 982f227028685b85c550361be7ba5d41 784 Gene3D G3DSA:3.40.50.300 397 570 9.2E-302 T 12-10-2018 N288_22155 982f227028685b85c550361be7ba5d41 784 SUPERFAMILY SSF52540 397 557 8.86E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_22155 982f227028685b85c550361be7ba5d41 784 SUPERFAMILY SSF81767 225 348 1.02E-41 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 N288_22155 982f227028685b85c550361be7ba5d41 784 TIGRFAM TIGR04397 SecA2_Bac_anthr: accessory Sec system translocase SecA2 6 776 0.0 T 12-10-2018 IPR030908 Protein translocase subunit SecA 2, Bacillus anthracis-type N288_22155 982f227028685b85c550361be7ba5d41 784 Gene3D G3DSA:3.90.1440.10 227 348 9.2E-302 T 12-10-2018 N288_22155 982f227028685b85c550361be7ba5d41 784 SMART SM00957 5 382 2.7E-247 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 N288_22155 982f227028685b85c550361be7ba5d41 784 Gene3D G3DSA:3.40.50.300 14 396 9.2E-302 T 12-10-2018 N288_22155 982f227028685b85c550361be7ba5d41 784 SMART SM00958 226 338 2.1E-51 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 N288_22155 982f227028685b85c550361be7ba5d41 784 Pfam PF01043 SecA preprotein cross-linking domain 232 338 2.1E-33 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 N288_22155 982f227028685b85c550361be7ba5d41 784 Gene3D G3DSA:1.10.1200.230 621 702 9.2E-302 T 12-10-2018 N288_22155 982f227028685b85c550361be7ba5d41 784 SUPERFAMILY SSF81886 572 777 4.97E-42 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily N288_22155 982f227028685b85c550361be7ba5d41 784 Gene3D G3DSA:1.10.3060.10 571 773 9.2E-302 T 12-10-2018 N288_22155 982f227028685b85c550361be7ba5d41 784 Pfam PF07516 SecA Wing and Scaffold domain 569 775 3.0E-38 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 N288_13030 82537bfb5f268d58027aba4efa911543 483 ProSitePatterns PS00438 Catalase proximal active site signature. 43 59 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_13030 82537bfb5f268d58027aba4efa911543 483 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 333 341 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_13030 82537bfb5f268d58027aba4efa911543 483 SUPERFAMILY SSF56634 4 479 7.72E-223 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_13030 82537bfb5f268d58027aba4efa911543 483 Pfam PF00199 Catalase 7 388 6.9E-202 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_13030 82537bfb5f268d58027aba4efa911543 483 Pfam PF06628 Catalase-related immune-responsive 413 475 4.1E-27 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_13030 82537bfb5f268d58027aba4efa911543 483 PIRSF PIRSF038928 1 480 8.9E-231 T 12-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_13030 82537bfb5f268d58027aba4efa911543 483 SMART SM01060 7 391 4.5E-303 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_13030 82537bfb5f268d58027aba4efa911543 483 Gene3D G3DSA:2.40.180.10 1 481 1.3E-237 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 N288_13030 82537bfb5f268d58027aba4efa911543 483 PRINTS PR00067 Catalase signature 288 315 1.6E-77 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_13030 82537bfb5f268d58027aba4efa911543 483 PRINTS PR00067 Catalase signature 123 141 1.6E-77 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_13030 82537bfb5f268d58027aba4efa911543 483 PRINTS PR00067 Catalase signature 83 101 1.6E-77 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_13030 82537bfb5f268d58027aba4efa911543 483 PRINTS PR00067 Catalase signature 104 121 1.6E-77 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_13030 82537bfb5f268d58027aba4efa911543 483 PRINTS PR00067 Catalase signature 20 43 1.6E-77 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_13030 82537bfb5f268d58027aba4efa911543 483 PRINTS PR00067 Catalase signature 320 346 1.6E-77 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_01730 9dbdaee825acd3bb2cc41e608d77f0c5 358 SUPERFAMILY SSF159774 57 348 2.22E-96 T 12-10-2018 IPR023158 YerB-like superfamily N288_01730 9dbdaee825acd3bb2cc41e608d77f0c5 358 Pfam PF11258 Protein of unknown function (DUF3048) N-terminal domain 61 201 8.8E-51 T 12-10-2018 IPR021416 Protein of unknown function DUF3048, N-terminal N288_01730 9dbdaee825acd3bb2cc41e608d77f0c5 358 Pfam PF17479 Protein of unknown function (DUF3048) C-terminal domain 231 339 4.4E-22 T 12-10-2018 IPR035328 Protein of unknown function DUF3048, C-terminal domain N288_01730 9dbdaee825acd3bb2cc41e608d77f0c5 358 Gene3D G3DSA:3.50.90.10 44 354 2.1E-104 T 12-10-2018 IPR023158 YerB-like superfamily N288_25190 19502b24d964eb220089d694a0bb6075 154 Gene3D G3DSA:3.90.79.10 2 147 3.4E-28 T 12-10-2018 N288_25190 19502b24d964eb220089d694a0bb6075 154 Pfam PF00293 NUDIX domain 6 131 9.2E-14 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_25190 19502b24d964eb220089d694a0bb6075 154 SUPERFAMILY SSF55811 4 142 1.62E-24 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_08500 df7d77fd4558dae90ea10d734a44ca7c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08500 df7d77fd4558dae90ea10d734a44ca7c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08500 df7d77fd4558dae90ea10d734a44ca7c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08500 df7d77fd4558dae90ea10d734a44ca7c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08500 df7d77fd4558dae90ea10d734a44ca7c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 3.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08500 df7d77fd4558dae90ea10d734a44ca7c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08500 df7d77fd4558dae90ea10d734a44ca7c 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 239 5.6E-75 T 12-10-2018 N288_08500 df7d77fd4558dae90ea10d734a44ca7c 246 Gene3D G3DSA:3.40.50.720 1 245 2.1E-81 T 12-10-2018 N288_08500 df7d77fd4558dae90ea10d734a44ca7c 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.8E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08500 df7d77fd4558dae90ea10d734a44ca7c 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.8E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08500 df7d77fd4558dae90ea10d734a44ca7c 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.8E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08500 df7d77fd4558dae90ea10d734a44ca7c 246 SUPERFAMILY SSF51735 4 240 1.07E-82 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_08500 df7d77fd4558dae90ea10d734a44ca7c 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_17965 c06853fcb233d81b22ee2667a3166c2f 278 Gene3D G3DSA:3.30.930.10 5 278 3.2E-70 T 12-10-2018 N288_17965 c06853fcb233d81b22ee2667a3166c2f 278 Hamap MF_02118 Octanoyltransferase LipM [lipM]. 3 278 67.913 T 12-10-2018 IPR024898 Octanoyltransferase LipM GO:0009107|GO:0009249|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 N288_17965 c06853fcb233d81b22ee2667a3166c2f 278 SUPERFAMILY SSF55681 5 278 4.56E-71 T 12-10-2018 N288_17965 c06853fcb233d81b22ee2667a3166c2f 278 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 189 1.6E-28 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 N288_01855 d7567be83b9e0dcbdb599f8056fc9060 208 SMART SM01207 7 182 4.2E-70 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 N288_01855 d7567be83b9e0dcbdb599f8056fc9060 208 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 179 1.5E-47 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 N288_01855 d7567be83b9e0dcbdb599f8056fc9060 208 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 191 3.4E-53 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 N288_01855 d7567be83b9e0dcbdb599f8056fc9060 208 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 4 190 18.158 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 N288_22275 6c437b3f5dec7c5ec490087e975a41b5 565 Pfam PF00144 Beta-lactamase 82 422 7.6E-78 T 12-10-2018 IPR001466 Beta-lactamase-related N288_22275 6c437b3f5dec7c5ec490087e975a41b5 565 Gene3D G3DSA:2.60.120.260 439 546 1.4E-5 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily N288_22275 6c437b3f5dec7c5ec490087e975a41b5 565 SUPERFAMILY SSF56601 72 431 1.01E-94 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_22275 6c437b3f5dec7c5ec490087e975a41b5 565 Gene3D G3DSA:3.40.710.10 63 430 3.8E-104 T 12-10-2018 N288_22275 6c437b3f5dec7c5ec490087e975a41b5 565 Pfam PF05547 Immune inhibitor A peptidase M6 442 544 5.5E-9 T 12-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 N288_07410 ea6bf6bc0ee746db16982e0706aa159a 288 PIRSF PIRSF012524 3 286 1.5E-96 T 12-10-2018 IPR014464 Conserved virulence factor B N288_07410 ea6bf6bc0ee746db16982e0706aa159a 288 SUPERFAMILY SSF46785 225 280 3.78E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_07410 ea6bf6bc0ee746db16982e0706aa159a 288 Gene3D G3DSA:2.40.50.140 155 222 1.3E-18 T 12-10-2018 N288_07410 ea6bf6bc0ee746db16982e0706aa159a 288 Gene3D G3DSA:2.40.50.140 75 152 1.5E-23 T 12-10-2018 N288_07410 ea6bf6bc0ee746db16982e0706aa159a 288 Gene3D G3DSA:1.10.10.10 223 284 2.9E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_07410 ea6bf6bc0ee746db16982e0706aa159a 288 SMART SM00316 153 215 15.0 T 12-10-2018 IPR022967 RNA-binding domain, S1 N288_07410 ea6bf6bc0ee746db16982e0706aa159a 288 SMART SM00316 6 66 0.099 T 12-10-2018 IPR022967 RNA-binding domain, S1 N288_07410 ea6bf6bc0ee746db16982e0706aa159a 288 Pfam PF13509 S1 domain 7 64 2.8E-21 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain N288_21140 77d747de7cb260ccb96c0b578f908c37 125 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 47 97 8.0E-8 T 12-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 N288_21140 77d747de7cb260ccb96c0b578f908c37 125 SUPERFAMILY SSF69118 12 120 2.36E-28 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 N288_21140 77d747de7cb260ccb96c0b578f908c37 125 Pfam PF02627 Carboxymuconolactone decarboxylase family 30 112 1.9E-19 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 N288_21140 77d747de7cb260ccb96c0b578f908c37 125 Gene3D G3DSA:1.20.1290.10 1 120 5.8E-31 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 N288_22375 9ac695ea56ab803d2ecb89606e1d01a8 556 SUPERFAMILY SSF51445 3 474 3.9E-155 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_22375 9ac695ea56ab803d2ecb89606e1d01a8 556 Gene3D G3DSA:2.60.40.1180 478 556 9.0E-23 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_22375 9ac695ea56ab803d2ecb89606e1d01a8 556 Pfam PF16657 Maltogenic Amylase, C-terminal domain 477 550 8.4E-10 T 12-10-2018 IPR032091 Maltogenic Amylase, C-terminal N288_22375 9ac695ea56ab803d2ecb89606e1d01a8 556 SUPERFAMILY SSF51011 477 555 3.43E-17 T 12-10-2018 N288_22375 9ac695ea56ab803d2ecb89606e1d01a8 556 Gene3D G3DSA:3.20.20.80 171 477 1.7E-120 T 12-10-2018 N288_22375 9ac695ea56ab803d2ecb89606e1d01a8 556 Gene3D G3DSA:3.20.20.80 1 109 1.4E-48 T 12-10-2018 N288_22375 9ac695ea56ab803d2ecb89606e1d01a8 556 Gene3D G3DSA:3.90.400.10 110 170 9.8E-33 T 12-10-2018 N288_22375 9ac695ea56ab803d2ecb89606e1d01a8 556 Pfam PF00128 Alpha amylase, catalytic domain 28 374 3.6E-116 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_22375 9ac695ea56ab803d2ecb89606e1d01a8 556 PRINTS PR00110 Alpha-amylase signature 92 103 9.6E-6 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 N288_22375 9ac695ea56ab803d2ecb89606e1d01a8 556 PRINTS PR00110 Alpha-amylase signature 316 328 9.6E-6 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 N288_22375 9ac695ea56ab803d2ecb89606e1d01a8 556 PRINTS PR00110 Alpha-amylase signature 193 204 9.6E-6 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 N288_22375 9ac695ea56ab803d2ecb89606e1d01a8 556 SMART SM00642 13 415 1.3E-156 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_09765 ebf5d86fe4c882ce38f014a333075934 120 Pfam PF00072 Response regulator receiver domain 5 115 7.0E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_09765 ebf5d86fe4c882ce38f014a333075934 120 SMART SM00448 3 115 3.3E-41 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_09765 ebf5d86fe4c882ce38f014a333075934 120 Gene3D G3DSA:3.40.50.2300 2 120 4.2E-41 T 12-10-2018 N288_09765 ebf5d86fe4c882ce38f014a333075934 120 SUPERFAMILY SSF52172 4 119 2.56E-41 T 12-10-2018 IPR011006 CheY-like superfamily N288_21065 019d09e1417d6243df8b23271ed55dba 34 Pfam PF16951 Putative methionine and alanine importer, small subunit 1 24 4.4E-7 T 12-10-2018 IPR031596 Putative methionine and alanine importer, small subunit N288_09515 25d37c4a30b4504dd89f9426b6e34fe0 1188 Gene3D G3DSA:3.30.70.1620 579 668 2.0E-65 T 12-10-2018 N288_09515 25d37c4a30b4504dd89f9426b6e34fe0 1188 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1181 24.585 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 N288_09515 25d37c4a30b4504dd89f9426b6e34fe0 1188 PIRSF PIRSF005719 1 1187 0.0 T 12-10-2018 IPR024704 Structural maintenance of chromosomes protein N288_09515 25d37c4a30b4504dd89f9426b6e34fe0 1188 Pfam PF06470 SMC proteins Flexible Hinge Domain 519 637 1.9E-31 T 12-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 N288_09515 25d37c4a30b4504dd89f9426b6e34fe0 1188 SUPERFAMILY SSF52540 3 1164 1.88E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_09515 25d37c4a30b4504dd89f9426b6e34fe0 1188 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 277 475 4.0E-4 T 12-10-2018 N288_09515 25d37c4a30b4504dd89f9426b6e34fe0 1188 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 139 2.3E-41 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal N288_09515 25d37c4a30b4504dd89f9426b6e34fe0 1188 SMART SM00968 519 638 8.1E-39 T 12-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 N288_09515 25d37c4a30b4504dd89f9426b6e34fe0 1188 Pfam PF02463 RecF/RecN/SMC N terminal domain 308 1172 1.6E-35 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal N288_09515 25d37c4a30b4504dd89f9426b6e34fe0 1188 Gene3D G3DSA:1.20.1060.20 495 680 2.0E-65 T 12-10-2018 N288_09515 25d37c4a30b4504dd89f9426b6e34fe0 1188 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1179 0.0 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 N288_09515 25d37c4a30b4504dd89f9426b6e34fe0 1188 SUPERFAMILY SSF75553 483 687 1.57E-54 T 12-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 N288_09515 25d37c4a30b4504dd89f9426b6e34fe0 1188 Gene3D G3DSA:3.40.50.300 1 246 3.2E-59 T 12-10-2018 N288_09515 25d37c4a30b4504dd89f9426b6e34fe0 1188 Gene3D G3DSA:3.40.50.300 967 1187 1.2E-55 T 12-10-2018 N288_24165 d2b71dcb13f7c914245775baa8b4f6ad 243 Gene3D G3DSA:3.40.50.300 2 238 3.2E-68 T 12-10-2018 N288_24165 d2b71dcb13f7c914245775baa8b4f6ad 243 SMART SM00382 32 211 2.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_24165 d2b71dcb13f7c914245775baa8b4f6ad 243 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_24165 d2b71dcb13f7c914245775baa8b4f6ad 243 Pfam PF00005 ABC transporter 23 164 1.1E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_24165 d2b71dcb13f7c914245775baa8b4f6ad 243 SUPERFAMILY SSF52540 6 226 1.55E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_12630 42f7d78365fb5e5048c03e1b385553aa 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 474 574 2.7E-12 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_12630 42f7d78365fb5e5048c03e1b385553aa 578 Pfam PF06580 Histidine kinase 374 453 3.0E-26 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 N288_12630 42f7d78365fb5e5048c03e1b385553aa 578 Pfam PF07694 5TMR of 5TMR-LYT 26 204 5.9E-55 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 N288_12630 42f7d78365fb5e5048c03e1b385553aa 578 SUPERFAMILY SSF55874 431 573 5.89E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_12630 42f7d78365fb5e5048c03e1b385553aa 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 573 5.9E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_12630 42f7d78365fb5e5048c03e1b385553aa 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 519 5.9E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_12630 42f7d78365fb5e5048c03e1b385553aa 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 551 5.9E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_12630 42f7d78365fb5e5048c03e1b385553aa 578 Gene3D G3DSA:3.30.565.10 424 576 3.9E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_12630 42f7d78365fb5e5048c03e1b385553aa 578 SMART SM00387 468 576 7.0E-10 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_15955 1d2aefc158c241e14c99a4f7d1baa4a3 191 Gene3D G3DSA:3.40.30.10 23 191 4.0E-48 T 12-10-2018 N288_15955 1d2aefc158c241e14c99a4f7d1baa4a3 191 Pfam PF00578 AhpC/TSA family 54 172 4.7E-35 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 N288_15955 1d2aefc158c241e14c99a4f7d1baa4a3 191 ProSitePatterns PS00194 Thioredoxin family active site. 81 99 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 N288_15955 1d2aefc158c241e14c99a4f7d1baa4a3 191 SUPERFAMILY SSF52833 51 184 2.06E-43 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_22580 da0f48c8487f6fdc6554718b218caa3c 297 Gene3D G3DSA:3.40.50.720 1 137 2.4E-12 T 12-10-2018 N288_22580 da0f48c8487f6fdc6554718b218caa3c 297 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 61 136 4.5E-6 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 N288_22580 da0f48c8487f6fdc6554718b218caa3c 297 SUPERFAMILY SSF51735 4 164 2.44E-14 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_20690 827860de8e7a6aa0dda4f22fcf5212ae 116 Gene3D G3DSA:1.10.260.40 4 116 5.2E-17 T 12-10-2018 N288_20690 827860de8e7a6aa0dda4f22fcf5212ae 116 SUPERFAMILY SSF47413 2 64 3.22E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_20690 827860de8e7a6aa0dda4f22fcf5212ae 116 Pfam PF01381 Helix-turn-helix 8 62 2.5E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_20690 827860de8e7a6aa0dda4f22fcf5212ae 116 SMART SM00530 7 62 4.5E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_13955 400527604ff5f404a5d028d8ec116bd2 334 Pfam PF11553 Protein of unknown function (DUF3231) 170 330 4.6E-49 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_13955 400527604ff5f404a5d028d8ec116bd2 334 Pfam PF11553 Protein of unknown function (DUF3231) 3 162 1.9E-55 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_13955 400527604ff5f404a5d028d8ec116bd2 334 Gene3D G3DSA:1.20.1260.10 1 148 3.5E-10 T 12-10-2018 IPR012347 Ferritin-like N288_22025 0bc47ecf052cbb862a2c0bd507801f71 395 PRINTS PR00207 Flagellin signature 109 132 1.4E-23 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 N288_22025 0bc47ecf052cbb862a2c0bd507801f71 395 PRINTS PR00207 Flagellin signature 35 52 1.4E-23 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 N288_22025 0bc47ecf052cbb862a2c0bd507801f71 395 PRINTS PR00207 Flagellin signature 74 93 1.4E-23 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 N288_22025 0bc47ecf052cbb862a2c0bd507801f71 395 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 1.7E-43 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 N288_22025 0bc47ecf052cbb862a2c0bd507801f71 395 Gene3D G3DSA:1.20.1330.10 43 175 1.1E-62 T 12-10-2018 N288_22025 0bc47ecf052cbb862a2c0bd507801f71 395 Gene3D G3DSA:1.20.1330.10 270 389 8.9E-19 T 12-10-2018 N288_22025 0bc47ecf052cbb862a2c0bd507801f71 395 Gene3D G3DSA:2.30.220.10 194 254 1.1E-62 T 12-10-2018 N288_22025 0bc47ecf052cbb862a2c0bd507801f71 395 Gene3D G3DSA:2.170.280.10 176 193 1.1E-62 T 12-10-2018 N288_22025 0bc47ecf052cbb862a2c0bd507801f71 395 SUPERFAMILY SSF64518 1 392 1.96E-85 T 12-10-2018 N288_22025 0bc47ecf052cbb862a2c0bd507801f71 395 Pfam PF00700 Bacterial flagellin C-terminal helical region 342 394 5.8E-16 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 N288_22025 0bc47ecf052cbb862a2c0bd507801f71 395 Gene3D G3DSA:1.20.58.1830 3 31 1.1E-62 T 12-10-2018 N288_15930 a8985de16d56099be31e60915dd5149b 156 SUPERFAMILY SSF52121 4 154 6.54E-64 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 N288_15930 a8985de16d56099be31e60915dd5149b 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 6.8E-61 T 12-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 N288_15930 a8985de16d56099be31e60915dd5149b 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 31.785 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 N288_15930 a8985de16d56099be31e60915dd5149b 156 Gene3D G3DSA:3.40.50.960 2 155 4.7E-66 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 N288_15930 a8985de16d56099be31e60915dd5149b 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 149 5.6E-58 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 N288_21875 6e99db09923a6169fe7e99bdc989c9ad 327 SUPERFAMILY SSF51735 2 152 2.39E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_21875 6e99db09923a6169fe7e99bdc989c9ad 327 Gene3D G3DSA:3.30.360.10 134 326 4.3E-59 T 12-10-2018 N288_21875 6e99db09923a6169fe7e99bdc989c9ad 327 SUPERFAMILY SSF55347 126 291 1.96E-28 T 12-10-2018 N288_21875 6e99db09923a6169fe7e99bdc989c9ad 327 Gene3D G3DSA:3.40.50.720 1 133 4.6E-37 T 12-10-2018 N288_21875 6e99db09923a6169fe7e99bdc989c9ad 327 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 118 1.1E-26 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 N288_23390 4d9e42461ee1bbf4233a48301460a1db 390 SUPERFAMILY SSF53756 2 389 1.27E-75 T 12-10-2018 N288_23390 4d9e42461ee1bbf4233a48301460a1db 390 Gene3D G3DSA:3.40.50.2000 1 203 1.9E-28 T 12-10-2018 N288_23390 4d9e42461ee1bbf4233a48301460a1db 390 Pfam PF00534 Glycosyl transferases group 1 196 365 3.4E-31 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 N288_23390 4d9e42461ee1bbf4233a48301460a1db 390 Gene3D G3DSA:3.40.50.2000 204 371 6.4E-40 T 12-10-2018 N288_23390 4d9e42461ee1bbf4233a48301460a1db 390 Pfam PF13439 Glycosyltransferase Family 4 14 182 3.7E-20 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 N288_17335 c06fa1e6b5e4f311d68ace1530abe55f 376 Gene3D G3DSA:2.30.140.30 264 354 1.8E-22 T 12-10-2018 N288_17335 c06fa1e6b5e4f311d68ace1530abe55f 376 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 18 246 3.3E-71 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 N288_17335 c06fa1e6b5e4f311d68ace1530abe55f 376 Gene3D G3DSA:3.40.710.10 25 263 2.5E-87 T 12-10-2018 N288_17335 c06fa1e6b5e4f311d68ace1530abe55f 376 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 127 140 7.8E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 N288_17335 c06fa1e6b5e4f311d68ace1530abe55f 376 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 100 117 7.8E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 N288_17335 c06fa1e6b5e4f311d68ace1530abe55f 376 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 52 63 7.8E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 N288_17335 c06fa1e6b5e4f311d68ace1530abe55f 376 SUPERFAMILY SSF56601 2 263 5.99E-67 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_10975 6bb2478aae357fe073c4099bb4808431 361 Pfam PF01594 AI-2E family transporter 20 343 5.5E-76 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like N288_14450 05b08505e4b33db488a8fa38b8460a92 249 SUPERFAMILY SSF53335 37 213 1.48E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_14450 05b08505e4b33db488a8fa38b8460a92 249 Gene3D G3DSA:3.40.50.150 36 248 1.0E-44 T 12-10-2018 N288_14450 05b08505e4b33db488a8fa38b8460a92 249 Pfam PF08241 Methyltransferase domain 51 148 1.9E-19 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 N288_06145 caba7c290d0e3fc3ab9207837d237a91 300 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 153 2.8E-45 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 N288_06145 caba7c290d0e3fc3ab9207837d237a91 300 Gene3D G3DSA:1.10.1040.10 167 297 4.2E-48 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 N288_06145 caba7c290d0e3fc3ab9207837d237a91 300 SMART SM01350 167 300 3.6E-5 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 N288_06145 caba7c290d0e3fc3ab9207837d237a91 300 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 24 4.8E-30 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 N288_06145 caba7c290d0e3fc3ab9207837d237a91 300 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 156 184 4.8E-30 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 N288_06145 caba7c290d0e3fc3ab9207837d237a91 300 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 59 88 4.8E-30 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 N288_06145 caba7c290d0e3fc3ab9207837d237a91 300 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 231 258 4.8E-30 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 N288_06145 caba7c290d0e3fc3ab9207837d237a91 300 SUPERFAMILY SSF51735 2 153 1.69E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_06145 caba7c290d0e3fc3ab9207837d237a91 300 SUPERFAMILY SSF48179 165 295 2.31E-39 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_06145 caba7c290d0e3fc3ab9207837d237a91 300 Gene3D G3DSA:3.40.50.720 1 166 9.4E-53 T 12-10-2018 N288_06145 caba7c290d0e3fc3ab9207837d237a91 300 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 167 275 8.1E-22 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 N288_06145 caba7c290d0e3fc3ab9207837d237a91 300 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 2 297 5.4E-129 T 12-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 N288_19775 519b661a4a9348bb440a2d64c5daedd4 233 Pfam PF11167 Protein of unknown function (DUF2953) 135 186 5.4E-18 T 12-10-2018 IPR021338 Protein of unknown function DUF2953 N288_08855 56e5a7567841cf21231562b6913b4bc8 206 Pfam PF06335 Protein of unknown function (DUF1054) 6 203 2.6E-84 T 12-10-2018 IPR009403 Protein of unknown function UPF0637 N288_08855 56e5a7567841cf21231562b6913b4bc8 206 PIRSF PIRSF021332 1 206 4.3E-83 T 12-10-2018 IPR009403 Protein of unknown function UPF0637 N288_08855 56e5a7567841cf21231562b6913b4bc8 206 Hamap MF_01851 UPF0637 protein . 5 205 38.274 T 12-10-2018 IPR009403 Protein of unknown function UPF0637 N288_08855 56e5a7567841cf21231562b6913b4bc8 206 SUPERFAMILY SSF142913 3 206 4.18E-82 T 12-10-2018 N288_08855 56e5a7567841cf21231562b6913b4bc8 206 Gene3D G3DSA:3.30.930.20 3 206 1.5E-86 T 12-10-2018 N288_25045 161c128db298e860cc1a69fd6acb8982 203 PIRSF PIRSF010372 1 203 5.4E-66 T 12-10-2018 IPR007396 Transcriptional regulator PAI 2-type N288_25045 161c128db298e860cc1a69fd6acb8982 203 Pfam PF04299 Putative FMN-binding domain 1 159 9.9E-53 T 12-10-2018 IPR007396 Transcriptional regulator PAI 2-type N288_25045 161c128db298e860cc1a69fd6acb8982 203 SUPERFAMILY SSF50475 10 177 2.72E-37 T 12-10-2018 N288_25045 161c128db298e860cc1a69fd6acb8982 203 Gene3D G3DSA:2.30.110.10 1 202 2.4E-73 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 N288_19275 0cec6a612c10dd697d9fbae69f8030f7 510 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 N288_19275 0cec6a612c10dd697d9fbae69f8030f7 510 SMART SM00917 368 500 1.8E-35 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 N288_19275 0cec6a612c10dd697d9fbae69f8030f7 510 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 11 27 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 N288_19275 0cec6a612c10dd697d9fbae69f8030f7 510 Gene3D G3DSA:1.10.238.260 279 391 1.5E-39 T 12-10-2018 N288_19275 0cec6a612c10dd697d9fbae69f8030f7 510 SUPERFAMILY SSF51569 3 290 3.48E-91 T 12-10-2018 N288_19275 0cec6a612c10dd697d9fbae69f8030f7 510 Pfam PF08502 LeuA allosteric (dimerisation) domain 368 499 1.6E-36 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 N288_19275 0cec6a612c10dd697d9fbae69f8030f7 510 Gene3D G3DSA:3.30.160.270 392 500 3.1E-13 T 12-10-2018 N288_19275 0cec6a612c10dd697d9fbae69f8030f7 510 Pfam PF00682 HMGL-like 4 272 1.2E-90 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 N288_19275 0cec6a612c10dd697d9fbae69f8030f7 510 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 1 509 42.865 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 N288_19275 0cec6a612c10dd697d9fbae69f8030f7 510 Gene3D G3DSA:3.20.20.70 1 275 7.5E-108 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_19275 0cec6a612c10dd697d9fbae69f8030f7 510 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 9.5E-226 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 N288_19275 0cec6a612c10dd697d9fbae69f8030f7 510 SUPERFAMILY SSF110921 394 499 5.62E-21 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 N288_23930 ffd83083051f3faec5accfb5931200a9 225 SUPERFAMILY SSF46689 18 92 1.4E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_23930 ffd83083051f3faec5accfb5931200a9 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 66 2.9E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_23930 ffd83083051f3faec5accfb5931200a9 225 SUPERFAMILY SSF48498 92 207 2.08E-11 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily N288_23930 ffd83083051f3faec5accfb5931200a9 225 Gene3D G3DSA:1.10.357.10 61 207 2.4E-19 T 12-10-2018 N288_23930 ffd83083051f3faec5accfb5931200a9 225 Gene3D G3DSA:1.10.10.60 16 59 5.0E-15 T 12-10-2018 N288_23930 ffd83083051f3faec5accfb5931200a9 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 9.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_23930 ffd83083051f3faec5accfb5931200a9 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 9.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_10280 07922021293915c9f698850c61066f82 444 SUPERFAMILY SSF54368 5 104 2.09E-34 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 N288_10280 07922021293915c9f698850c61066f82 444 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 234 249 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 N288_10280 07922021293915c9f698850c61066f82 444 SMART SM01230 105 354 2.9E-142 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 N288_10280 07922021293915c9f698850c61066f82 444 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 361 373 - T 12-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 N288_10280 07922021293915c9f698850c61066f82 444 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 99 4.2E-34 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 N288_10280 07922021293915c9f698850c61066f82 444 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 441 3.2E-188 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 N288_10280 07922021293915c9f698850c61066f82 444 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 12-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 N288_10280 07922021293915c9f698850c61066f82 444 Gene3D G3DSA:3.30.590.10 108 444 7.1E-149 T 12-10-2018 N288_10280 07922021293915c9f698850c61066f82 444 Pfam PF00120 Glutamine synthetase, catalytic domain 106 440 7.5E-144 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 N288_10280 07922021293915c9f698850c61066f82 444 Gene3D G3DSA:3.10.20.70 2 107 9.7E-45 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 N288_10280 07922021293915c9f698850c61066f82 444 SUPERFAMILY SSF55931 105 442 1.47E-131 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 N288_24210 83684c447fbdfd7a0dad2c3aa963f80c 227 Pfam PF04542 Sigma-70 region 2 21 81 3.2E-6 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_24210 83684c447fbdfd7a0dad2c3aa963f80c 227 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 156 1.0E-12 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_24210 83684c447fbdfd7a0dad2c3aa963f80c 227 SUPERFAMILY SSF88659 96 156 3.36E-9 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_24210 83684c447fbdfd7a0dad2c3aa963f80c 227 Gene3D G3DSA:1.10.10.10 99 158 1.4E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_24210 83684c447fbdfd7a0dad2c3aa963f80c 227 Gene3D G3DSA:1.10.1740.10 3 83 3.3E-9 T 12-10-2018 N288_24210 83684c447fbdfd7a0dad2c3aa963f80c 227 SUPERFAMILY SSF88946 4 88 1.02E-9 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_24210 83684c447fbdfd7a0dad2c3aa963f80c 227 Pfam PF08281 Sigma-70, region 4 102 154 8.7E-10 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 Pfam PF03144 Elongation factor Tu domain 2 221 291 3.4E-12 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 SMART SM00838 397 485 1.4E-4 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 Pfam PF00009 Elongation factor Tu GTP binding domain 6 197 4.2E-57 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 601 1.1E-289 T 12-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 Gene3D G3DSA:3.30.70.870 308 592 1.9E-127 T 12-10-2018 N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 Gene3D G3DSA:2.40.30.10 201 301 3.2E-31 T 12-10-2018 N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 SUPERFAMILY SSF52540 4 208 1.51E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 Pfam PF14492 Elongation Factor G, domain II 330 379 2.2E-7 T 12-10-2018 N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 PRINTS PR00315 GTP-binding elongation factor signature 89 100 2.6E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 PRINTS PR00315 GTP-binding elongation factor signature 9 22 2.6E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 PRINTS PR00315 GTP-binding elongation factor signature 53 61 2.6E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 PRINTS PR00315 GTP-binding elongation factor signature 125 134 2.6E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 PRINTS PR00315 GTP-binding elongation factor signature 73 83 2.6E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 Gene3D G3DSA:3.40.50.300 4 200 1.2E-67 T 12-10-2018 N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 Pfam PF00679 Elongation factor G C-terminus 399 479 2.9E-24 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 SUPERFAMILY SSF54980 304 389 1.4E-15 T 12-10-2018 IPR035647 EF-G domain III/V-like N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 SUPERFAMILY SSF50447 154 301 9.15E-31 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 137 4.7E-23 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 SUPERFAMILY SSF54980 400 514 1.15E-28 T 12-10-2018 IPR035647 EF-G domain III/V-like N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 Gene3D G3DSA:2.40.50.250 485 601 1.9E-127 T 12-10-2018 N288_08885 b2bca9a1097a0c5e097fe41a96027e35 612 Gene3D G3DSA:3.30.70.240 391 484 1.9E-127 T 12-10-2018 N288_00330 bdc6428ddd43deb1b59d4335aeeb7dff 457 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 N288_00330 bdc6428ddd43deb1b59d4335aeeb7dff 457 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 452 4.1E-188 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 N288_00330 bdc6428ddd43deb1b59d4335aeeb7dff 457 Gene3D G3DSA:2.160.10.10 253 439 9.8E-53 T 12-10-2018 N288_00330 bdc6428ddd43deb1b59d4335aeeb7dff 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 318 352 2.7E-7 T 12-10-2018 IPR001451 Hexapeptide repeat N288_00330 bdc6428ddd43deb1b59d4335aeeb7dff 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 428 8.0E-7 T 12-10-2018 IPR001451 Hexapeptide repeat N288_00330 bdc6428ddd43deb1b59d4335aeeb7dff 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 1.2E-7 T 12-10-2018 IPR001451 Hexapeptide repeat N288_00330 bdc6428ddd43deb1b59d4335aeeb7dff 457 SUPERFAMILY SSF53448 5 307 1.51E-67 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_00330 bdc6428ddd43deb1b59d4335aeeb7dff 457 Pfam PF00483 Nucleotidyl transferase 6 215 8.2E-25 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 N288_00330 bdc6428ddd43deb1b59d4335aeeb7dff 457 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 452 42.158 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 N288_00330 bdc6428ddd43deb1b59d4335aeeb7dff 457 Gene3D G3DSA:3.90.550.10 2 252 3.9E-80 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_00330 bdc6428ddd43deb1b59d4335aeeb7dff 457 SUPERFAMILY SSF51161 255 439 4.5E-49 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily N288_19910 6a02062a22d238e98aa16a9901f99783 246 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 10 55 8.0E-19 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain N288_19910 6a02062a22d238e98aa16a9901f99783 246 Gene3D G3DSA:3.30.1330.60 81 244 1.6E-48 T 12-10-2018 IPR036737 OmpA-like domain superfamily N288_19910 6a02062a22d238e98aa16a9901f99783 246 SUPERFAMILY SSF103088 119 235 1.31E-32 T 12-10-2018 IPR036737 OmpA-like domain superfamily N288_19910 6a02062a22d238e98aa16a9901f99783 246 Pfam PF00691 OmpA family 131 229 4.4E-20 T 12-10-2018 IPR006665 OmpA-like domain N288_18355 2f7c78f7ad2ec83380400871b643cb44 135 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 2 130 9.1E-41 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 N288_23295 b36363dd33ee0beb9056840770cfd001 369 Pfam PF00534 Glycosyl transferases group 1 185 341 6.3E-20 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 N288_23295 b36363dd33ee0beb9056840770cfd001 369 SUPERFAMILY SSF53756 11 363 3.77E-43 T 12-10-2018 N288_23295 b36363dd33ee0beb9056840770cfd001 369 Gene3D G3DSA:3.40.50.2000 176 347 4.2E-43 T 12-10-2018 N288_23295 b36363dd33ee0beb9056840770cfd001 369 Gene3D G3DSA:3.40.50.2000 17 354 4.2E-43 T 12-10-2018 N288_23295 b36363dd33ee0beb9056840770cfd001 369 Pfam PF13477 Glycosyl transferase 4-like 25 149 2.3E-5 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 N288_12580 b7ed2df5a398a41d239450fdc77f7256 185 Gene3D G3DSA:3.40.630.30 5 179 6.1E-40 T 12-10-2018 N288_12580 b7ed2df5a398a41d239450fdc77f7256 185 Pfam PF13523 Acetyltransferase (GNAT) domain 17 157 2.7E-24 T 12-10-2018 N288_12580 b7ed2df5a398a41d239450fdc77f7256 185 SUPERFAMILY SSF55729 5 179 2.38E-32 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 Gene3D G3DSA:2.60.120.260 6 219 4.0E-83 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 46 218 1.9E-36 T 12-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 SUPERFAMILY SSF74650 725 1010 1.33E-79 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 SUPERFAMILY SSF49303 618 713 2.23E-20 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 Gene3D G3DSA:2.70.98.10 723 1010 6.3E-75 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 PRINTS PR00132 Glycosyl hydrolase family 2 signature 366 384 3.7E-37 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 PRINTS PR00132 Glycosyl hydrolase family 2 signature 335 349 3.7E-37 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 PRINTS PR00132 Glycosyl hydrolase family 2 signature 146 161 3.7E-37 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 PRINTS PR00132 Glycosyl hydrolase family 2 signature 521 536 3.7E-37 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 PRINTS PR00132 Glycosyl hydrolase family 2 signature 446 461 3.7E-37 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 Pfam PF16353 Domain of unknown function(DUF4981) 627 711 3.8E-18 T 12-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 Gene3D G3DSA:2.60.40.10 618 714 1.2E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 SUPERFAMILY SSF49303 220 324 8.63E-21 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 376 401 - T 12-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 Gene3D G3DSA:3.20.20.80 326 613 4.8E-98 T 12-10-2018 N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 SUPERFAMILY SSF51445 326 615 3.76E-88 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 326 618 1.5E-127 T 12-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 Pfam PF02929 Beta galactosidase small chain 741 1009 2.0E-69 T 12-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 Pfam PF00703 Glycosyl hydrolases family 2 220 324 6.7E-14 T 12-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 SUPERFAMILY SSF49785 8 218 1.84E-64 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 SMART SM01038 738 1010 9.1E-102 T 12-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 Gene3D G3DSA:2.60.40.10 220 324 9.1E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_02195 0e704a7bb69d02013cf15bac671a42d6 1012 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 446 460 - T 12-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 N288_06805 7c1933b75f3677b9e4bf08cbf5633214 29 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 6 28 1.5E-13 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like N288_06805 7c1933b75f3677b9e4bf08cbf5633214 29 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 4 29 2.4E-15 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like N288_15265 ebb39f6876d165a2df3b5b2f034162ef 123 Gene3D G3DSA:1.10.3730.20 1 109 1.2E-36 T 12-10-2018 N288_15265 ebb39f6876d165a2df3b5b2f034162ef 123 Pfam PF00893 Small Multidrug Resistance protein 4 94 5.9E-27 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 N288_15265 ebb39f6876d165a2df3b5b2f034162ef 123 SUPERFAMILY SSF103481 5 106 1.96E-20 T 12-10-2018 N288_20070 6c6524ad62dc35416e88a59c3a2f1873 291 TIGRFAM TIGR01121 D_amino_aminoT: D-amino-acid transaminase 4 278 8.0E-123 T 12-10-2018 IPR005784 D-amino acid aminotransferase GO:0008483|GO:0030170|GO:0046416 KEGG: 00310+2.6.1.21|KEGG: 00330+2.6.1.21|KEGG: 00360+2.6.1.21|KEGG: 00472+2.6.1.21|KEGG: 00473+2.6.1.21 N288_20070 6c6524ad62dc35416e88a59c3a2f1873 291 Gene3D G3DSA:3.30.470.10 2 119 6.4E-35 T 12-10-2018 N288_20070 6c6524ad62dc35416e88a59c3a2f1873 291 ProSitePatterns PS00770 Aminotransferases class-IV signature. 178 207 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 N288_20070 6c6524ad62dc35416e88a59c3a2f1873 291 SUPERFAMILY SSF56752 4 275 7.59E-82 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 N288_20070 6c6524ad62dc35416e88a59c3a2f1873 291 Pfam PF01063 Amino-transferase class IV 30 250 2.0E-49 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 N288_20070 6c6524ad62dc35416e88a59c3a2f1873 291 Gene3D G3DSA:3.20.10.10 120 283 6.6E-57 T 12-10-2018 N288_00440 d4f0fe614a87b60d726de285b2080005 260 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 255 37.803 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 N288_00440 d4f0fe614a87b60d726de285b2080005 260 Gene3D G3DSA:3.30.420.40 1 89 6.0E-35 T 12-10-2018 N288_00440 d4f0fe614a87b60d726de285b2080005 260 Gene3D G3DSA:3.30.420.40 90 260 1.8E-64 T 12-10-2018 N288_00440 d4f0fe614a87b60d726de285b2080005 260 SUPERFAMILY SSF53067 3 123 1.41E-39 T 12-10-2018 N288_00440 d4f0fe614a87b60d726de285b2080005 260 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 5 250 4.6E-86 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 N288_00440 d4f0fe614a87b60d726de285b2080005 260 Pfam PF03309 Type III pantothenate kinase 4 207 1.5E-76 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 N288_00440 d4f0fe614a87b60d726de285b2080005 260 SUPERFAMILY SSF53067 124 254 1.94E-41 T 12-10-2018 N288_19290 2a9979a3e2759fc6fab713c09d8cc03d 571 Gene3D G3DSA:3.40.50.1220 201 365 3.6E-58 T 12-10-2018 N288_19290 2a9979a3e2759fc6fab713c09d8cc03d 571 SUPERFAMILY SSF52518 13 188 5.47E-59 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_19290 2a9979a3e2759fc6fab713c09d8cc03d 571 SUPERFAMILY SSF52518 374 568 2.95E-68 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_19290 2a9979a3e2759fc6fab713c09d8cc03d 571 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 18 180 8.3E-55 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 N288_19290 2a9979a3e2759fc6fab713c09d8cc03d 571 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 397 544 7.2E-49 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 N288_19290 2a9979a3e2759fc6fab713c09d8cc03d 571 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 18 568 2.2E-252 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 N288_19290 2a9979a3e2759fc6fab713c09d8cc03d 571 Gene3D G3DSA:3.40.50.970 368 570 2.1E-68 T 12-10-2018 N288_19290 2a9979a3e2759fc6fab713c09d8cc03d 571 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 434 453 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 N288_19290 2a9979a3e2759fc6fab713c09d8cc03d 571 SUPERFAMILY SSF52467 198 366 1.44E-59 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily N288_19290 2a9979a3e2759fc6fab713c09d8cc03d 571 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 206 341 4.0E-43 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 N288_19290 2a9979a3e2759fc6fab713c09d8cc03d 571 Gene3D G3DSA:3.40.50.970 9 193 1.1E-69 T 12-10-2018 N288_17945 d4bf02dd7881bfc7920b9586f5fd80e3 295 Pfam PF01734 Patatin-like phospholipase 6 196 1.5E-32 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 N288_17945 d4bf02dd7881bfc7920b9586f5fd80e3 295 Gene3D G3DSA:3.40.1090.20 2 91 1.6E-22 T 12-10-2018 N288_17945 d4bf02dd7881bfc7920b9586f5fd80e3 295 Gene3D G3DSA:3.40.1090.10 96 293 4.4E-22 T 12-10-2018 N288_17945 d4bf02dd7881bfc7920b9586f5fd80e3 295 SUPERFAMILY SSF52151 6 293 4.45E-44 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase N288_20045 5cae15fa48c5167e6f5ffd27c7e6436a 713 Gene3D G3DSA:3.20.20.80 202 624 7.3E-166 T 12-10-2018 N288_20045 5cae15fa48c5167e6f5ffd27c7e6436a 713 Gene3D G3DSA:2.60.40.10 98 201 6.2E-26 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_20045 5cae15fa48c5167e6f5ffd27c7e6436a 713 TIGRFAM TIGR02104 pulA_typeI: pullulanase, type I 95 689 1.7E-235 T 12-10-2018 IPR011840 Pullulanase, type I N288_20045 5cae15fa48c5167e6f5ffd27c7e6436a 713 SUPERFAMILY SSF51445 212 622 1.45E-117 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_20045 5cae15fa48c5167e6f5ffd27c7e6436a 713 Pfam PF00128 Alpha amylase, catalytic domain 377 576 1.3E-6 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_20045 5cae15fa48c5167e6f5ffd27c7e6436a 713 Pfam PF00128 Alpha amylase, catalytic domain 253 342 5.8E-5 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_20045 5cae15fa48c5167e6f5ffd27c7e6436a 713 Gene3D G3DSA:2.60.40.2320 1 97 4.8E-33 T 12-10-2018 N288_20045 5cae15fa48c5167e6f5ffd27c7e6436a 713 SMART SM00642 227 615 5.9E-7 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_20045 5cae15fa48c5167e6f5ffd27c7e6436a 713 Gene3D G3DSA:2.60.40.1180 625 712 2.4E-11 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_20045 5cae15fa48c5167e6f5ffd27c7e6436a 713 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 106 182 1.4E-13 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 N288_20045 5cae15fa48c5167e6f5ffd27c7e6436a 713 SUPERFAMILY SSF81296 98 198 1.19E-18 T 12-10-2018 IPR014756 Immunoglobulin E-set N288_10255 d4296f2b33a3cf12119f29cabf476930 324 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 101 231 6.6E-19 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 N288_10255 d4296f2b33a3cf12119f29cabf476930 324 Gene3D G3DSA:1.10.8.60 233 322 2.4E-20 T 12-10-2018 N288_10255 d4296f2b33a3cf12119f29cabf476930 324 TIGRFAM TIGR02881 spore_V_K: stage V sporulation protein K 57 318 7.4E-134 T 12-10-2018 IPR014232 Sporulation stage V, protein K N288_10255 d4296f2b33a3cf12119f29cabf476930 324 SMART SM00382 97 235 1.3E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_10255 d4296f2b33a3cf12119f29cabf476930 324 PRINTS PR00819 CbxX/CfqX superfamily signature 60 74 1.5E-60 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 N288_10255 d4296f2b33a3cf12119f29cabf476930 324 PRINTS PR00819 CbxX/CfqX superfamily signature 100 115 1.5E-60 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 N288_10255 d4296f2b33a3cf12119f29cabf476930 324 PRINTS PR00819 CbxX/CfqX superfamily signature 152 171 1.5E-60 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 N288_10255 d4296f2b33a3cf12119f29cabf476930 324 PRINTS PR00819 CbxX/CfqX superfamily signature 280 292 1.5E-60 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 N288_10255 d4296f2b33a3cf12119f29cabf476930 324 PRINTS PR00819 CbxX/CfqX superfamily signature 138 152 1.5E-60 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 N288_10255 d4296f2b33a3cf12119f29cabf476930 324 PRINTS PR00819 CbxX/CfqX superfamily signature 182 194 1.5E-60 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 N288_10255 d4296f2b33a3cf12119f29cabf476930 324 PRINTS PR00819 CbxX/CfqX superfamily signature 220 239 1.5E-60 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 N288_10255 d4296f2b33a3cf12119f29cabf476930 324 PRINTS PR00819 CbxX/CfqX superfamily signature 203 220 1.5E-60 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 N288_10255 d4296f2b33a3cf12119f29cabf476930 324 Gene3D G3DSA:3.40.50.300 45 232 2.6E-55 T 12-10-2018 N288_10255 d4296f2b33a3cf12119f29cabf476930 324 SUPERFAMILY SSF52540 55 300 1.57E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_17315 dfbaf4149fbe3eb64063463a001e1160 175 Pfam PF00578 AhpC/TSA family 38 154 2.4E-36 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 N288_17315 dfbaf4149fbe3eb64063463a001e1160 175 Gene3D G3DSA:3.40.30.10 29 174 1.0E-47 T 12-10-2018 N288_17315 dfbaf4149fbe3eb64063463a001e1160 175 SUPERFAMILY SSF52833 36 173 5.51E-45 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_08000 902c94561aa5ddf3f21e4527bf3d7371 113 Pfam PF06127 Protein of unknown function (DUF962) 4 98 1.7E-32 T 12-10-2018 IPR009305 Protein of unknown function DUF962 N288_25570 e2a663bad32235e93634ee09311e3e6f 285 SUPERFAMILY SSF56281 27 242 1.05E-30 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_25570 e2a663bad32235e93634ee09311e3e6f 285 Gene3D G3DSA:3.60.15.10 5 246 1.3E-31 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_25570 e2a663bad32235e93634ee09311e3e6f 285 Pfam PF00753 Metallo-beta-lactamase superfamily 29 223 3.0E-14 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_25570 e2a663bad32235e93634ee09311e3e6f 285 SMART SM00849 22 223 3.4E-11 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_07300 4aa522d865d49ffa986d4432ccbaf99c 210 Gene3D G3DSA:3.40.50.12740 3 210 5.0E-68 T 12-10-2018 N288_07300 4aa522d865d49ffa986d4432ccbaf99c 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 6.7E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_07300 4aa522d865d49ffa986d4432ccbaf99c 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.1E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_07300 4aa522d865d49ffa986d4432ccbaf99c 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.1E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_07300 4aa522d865d49ffa986d4432ccbaf99c 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.1E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_07300 4aa522d865d49ffa986d4432ccbaf99c 210 SMART SM00421 147 204 4.6E-27 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_07300 4aa522d865d49ffa986d4432ccbaf99c 210 SMART SM00448 2 115 3.0E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_07300 4aa522d865d49ffa986d4432ccbaf99c 210 SUPERFAMILY SSF46894 138 209 1.56E-22 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_07300 4aa522d865d49ffa986d4432ccbaf99c 210 SUPERFAMILY SSF52172 3 130 5.55E-35 T 12-10-2018 IPR011006 CheY-like superfamily N288_07300 4aa522d865d49ffa986d4432ccbaf99c 210 Pfam PF00072 Response regulator receiver domain 4 115 1.7E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_10055 1906e395b6d7baf4e06a04a79abb8060 782 SUPERFAMILY SSF52540 392 688 4.78E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_10055 1906e395b6d7baf4e06a04a79abb8060 782 Gene3D G3DSA:1.10.10.10 708 772 9.5E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_10055 1906e395b6d7baf4e06a04a79abb8060 782 SMART SM00843 711 776 6.8E-39 T 12-10-2018 IPR018541 FtsK gamma domain N288_10055 1906e395b6d7baf4e06a04a79abb8060 782 Pfam PF01580 FtsK/SpoIIIE family 420 616 1.2E-65 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 N288_10055 1906e395b6d7baf4e06a04a79abb8060 782 Gene3D G3DSA:3.30.980.40 312 415 2.7E-37 T 12-10-2018 N288_10055 1906e395b6d7baf4e06a04a79abb8060 782 SUPERFAMILY SSF46785 712 775 6.39E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_10055 1906e395b6d7baf4e06a04a79abb8060 782 Pfam PF09397 Ftsk gamma domain 714 773 1.2E-29 T 12-10-2018 IPR018541 FtsK gamma domain N288_10055 1906e395b6d7baf4e06a04a79abb8060 782 SMART SM00382 455 637 1.4E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_10055 1906e395b6d7baf4e06a04a79abb8060 782 Gene3D G3DSA:3.40.50.300 417 702 2.6E-113 T 12-10-2018 N288_15945 85ffd2712e197b09c51b72e7beca4a1b 371 SUPERFAMILY SSF53927 3 144 6.86E-48 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 N288_15945 85ffd2712e197b09c51b72e7beca4a1b 371 Gene3D G3DSA:3.40.430.10 136 361 6.3E-76 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 N288_15945 85ffd2712e197b09c51b72e7beca4a1b 371 Gene3D G3DSA:3.40.140.10 1 135 6.2E-46 T 12-10-2018 N288_15945 85ffd2712e197b09c51b72e7beca4a1b 371 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 355 6.2E-122 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 N288_15945 85ffd2712e197b09c51b72e7beca4a1b 371 SUPERFAMILY SSF53597 145 355 6.54E-60 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 N288_15945 85ffd2712e197b09c51b72e7beca4a1b 371 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 N288_15945 85ffd2712e197b09c51b72e7beca4a1b 371 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 99 1.1E-20 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain N288_15945 85ffd2712e197b09c51b72e7beca4a1b 371 Pfam PF01872 RibD C-terminal domain 147 354 6.2E-56 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 N288_15945 85ffd2712e197b09c51b72e7beca4a1b 371 PIRSF PIRSF006769 1 362 7.3E-132 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 N288_15945 85ffd2712e197b09c51b72e7beca4a1b 371 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 146 357 2.9E-67 T 12-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 N288_11435 7afddf0b7bd7aac4fed6bae11e223ea1 364 Pfam PF00534 Glycosyl transferases group 1 169 337 2.3E-22 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 N288_11435 7afddf0b7bd7aac4fed6bae11e223ea1 364 Gene3D G3DSA:3.40.50.2000 17 350 3.6E-34 T 12-10-2018 N288_11435 7afddf0b7bd7aac4fed6bae11e223ea1 364 Gene3D G3DSA:3.40.50.2000 159 344 3.6E-34 T 12-10-2018 N288_11435 7afddf0b7bd7aac4fed6bae11e223ea1 364 SUPERFAMILY SSF53756 10 360 4.93E-43 T 12-10-2018 N288_18410 d2383f772f68dea9d24beb9e4de420e1 726 Pfam PF01966 HD domain 513 654 1.1E-20 T 12-10-2018 IPR006674 HD domain N288_18410 d2383f772f68dea9d24beb9e4de420e1 726 SUPERFAMILY SSF109604 512 705 5.02E-16 T 12-10-2018 N288_18410 d2383f772f68dea9d24beb9e4de420e1 726 SMART SM00471 509 664 1.4E-10 T 12-10-2018 IPR003607 HD/PDEase domain N288_18410 d2383f772f68dea9d24beb9e4de420e1 726 Pfam PF07697 7TM-HD extracellular 50 282 2.7E-33 T 12-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain N288_18410 d2383f772f68dea9d24beb9e4de420e1 726 TIGRFAM TIGR00277 HDIG: HDIG domain 510 608 4.6E-29 T 12-10-2018 IPR006675 HDIG domain N288_18410 d2383f772f68dea9d24beb9e4de420e1 726 Pfam PF07698 7TM receptor with intracellular HD hydrolase 289 488 1.1E-49 T 12-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain N288_18410 d2383f772f68dea9d24beb9e4de420e1 726 Gene3D G3DSA:1.10.3210.10 486 685 7.9E-25 T 12-10-2018 N288_20850 8aad13625f07db2aedc995ef8912ceb3 354 Gene3D G3DSA:3.40.50.1820 79 346 3.8E-19 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_20850 8aad13625f07db2aedc995ef8912ceb3 354 Pfam PF00561 alpha/beta hydrolase fold 83 330 3.4E-16 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_20850 8aad13625f07db2aedc995ef8912ceb3 354 SUPERFAMILY SSF53474 50 347 9.89E-27 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_20240 01eeeaecad77402bfaeedba84a36a3be 315 Gene3D G3DSA:2.60.40.420 111 268 1.9E-39 T 12-10-2018 IPR008972 Cupredoxin N288_20240 01eeeaecad77402bfaeedba84a36a3be 315 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 47 105 1.0E-4 T 12-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20240 01eeeaecad77402bfaeedba84a36a3be 315 Gene3D G3DSA:1.10.287.90 25 110 6.8E-23 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20240 01eeeaecad77402bfaeedba84a36a3be 315 PIRSF PIRSF000292 1 305 1.7E-94 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 N288_20240 01eeeaecad77402bfaeedba84a36a3be 315 TIGRFAM TIGR01432 QOXA: cytochrome aa3 quinol oxidase, subunit II 11 236 1.9E-82 T 12-10-2018 IPR006332 Quinol oxidase subunit II GO:0009486|GO:0016021|GO:0016682|GO:0055114 N288_20240 01eeeaecad77402bfaeedba84a36a3be 315 SUPERFAMILY SSF49503 122 268 4.87E-40 T 12-10-2018 IPR008972 Cupredoxin N288_20240 01eeeaecad77402bfaeedba84a36a3be 315 SUPERFAMILY SSF81464 16 113 2.45E-16 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_03390 b5033152a6619c73d1bcf721bac028a9 195 Gene3D G3DSA:1.10.357.10 1 185 6.5E-35 T 12-10-2018 N288_03390 b5033152a6619c73d1bcf721bac028a9 195 SUPERFAMILY SSF46689 2 78 1.06E-20 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_03390 b5033152a6619c73d1bcf721bac028a9 195 Pfam PF13305 WHG domain 92 162 3.4E-9 T 12-10-2018 IPR025996 WHG domain N288_03390 b5033152a6619c73d1bcf721bac028a9 195 SUPERFAMILY SSF48498 87 162 4.34E-7 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily N288_03390 b5033152a6619c73d1bcf721bac028a9 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 4.2E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_03390 b5033152a6619c73d1bcf721bac028a9 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 4.2E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_03390 b5033152a6619c73d1bcf721bac028a9 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 1.6E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_18295 d7154fd056cae362286ee6bfc3da5a29 298 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 285 42.745 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 N288_18295 d7154fd056cae362286ee6bfc3da5a29 298 SMART SM00518 3 285 2.5E-127 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 N288_18295 d7154fd056cae362286ee6bfc3da5a29 298 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 282 4.4E-102 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 N288_18295 d7154fd056cae362286ee6bfc3da5a29 298 SUPERFAMILY SSF51658 2 294 5.76E-101 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily N288_18295 d7154fd056cae362286ee6bfc3da5a29 298 Pfam PF01261 Xylose isomerase-like TIM barrel 22 237 1.7E-37 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain N288_18295 d7154fd056cae362286ee6bfc3da5a29 298 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 213 229 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 N288_18295 d7154fd056cae362286ee6bfc3da5a29 298 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 N288_18295 d7154fd056cae362286ee6bfc3da5a29 298 Gene3D G3DSA:3.20.20.150 1 297 3.2E-103 T 12-10-2018 N288_18295 d7154fd056cae362286ee6bfc3da5a29 298 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 N288_18495 5e7d0a9e9a2bc25948882d4c7e25bd6c 336 Gene3D G3DSA:1.10.10.10 1 78 2.5E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_18495 5e7d0a9e9a2bc25948882d4c7e25bd6c 336 Gene3D G3DSA:3.30.390.60 121 222 2.9E-61 T 12-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily N288_18495 5e7d0a9e9a2bc25948882d4c7e25bd6c 336 SUPERFAMILY SSF55781 64 332 1.8E-68 T 12-10-2018 N288_18495 5e7d0a9e9a2bc25948882d4c7e25bd6c 336 Pfam PF01628 HrcA protein C terminal domain 97 315 1.9E-65 T 12-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 N288_18495 5e7d0a9e9a2bc25948882d4c7e25bd6c 336 PIRSF PIRSF005485 1 333 7.0E-120 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 N288_18495 5e7d0a9e9a2bc25948882d4c7e25bd6c 336 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 2 327 5.6E-110 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 N288_18495 5e7d0a9e9a2bc25948882d4c7e25bd6c 336 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 322 31.019 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 N288_18495 5e7d0a9e9a2bc25948882d4c7e25bd6c 336 Gene3D G3DSA:3.30.450.40 97 329 2.9E-61 T 12-10-2018 IPR029016 GAF-like domain superfamily N288_18495 5e7d0a9e9a2bc25948882d4c7e25bd6c 336 SUPERFAMILY SSF46785 2 78 1.16E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_12065 354b0125ac9fc29df3a268ab9dc1546b 251 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 12-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 N288_12065 354b0125ac9fc29df3a268ab9dc1546b 251 SUPERFAMILY SSF56219 1 249 1.15E-78 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily N288_12065 354b0125ac9fc29df3a268ab9dc1546b 251 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 249 1.1E-95 T 12-10-2018 N288_12065 354b0125ac9fc29df3a268ab9dc1546b 251 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 249 2.4E-98 T 12-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 N288_12065 354b0125ac9fc29df3a268ab9dc1546b 251 Gene3D G3DSA:3.60.10.10 1 250 4.4E-93 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily N288_12065 354b0125ac9fc29df3a268ab9dc1546b 251 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 242 3.5E-20 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase N288_13160 b8abdfa2c471464bd2c6213242f81e60 271 Hamap MF_02077 Lipid II flippase Amj [amj]. 6 269 24.447 T 12-10-2018 IPR021260 Lipid II flippase Amj N288_13160 b8abdfa2c471464bd2c6213242f81e60 271 Pfam PF10997 Alternate to MurJ 15 267 1.5E-89 T 12-10-2018 IPR021260 Lipid II flippase Amj N288_00465 484abcce0a440cbe7bcd93c4496ede89 196 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.9E-35 T 12-10-2018 N288_00465 484abcce0a440cbe7bcd93c4496ede89 196 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.9E-35 T 12-10-2018 N288_00465 484abcce0a440cbe7bcd93c4496ede89 196 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.9E-35 T 12-10-2018 N288_00465 484abcce0a440cbe7bcd93c4496ede89 196 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.9E-35 T 12-10-2018 N288_00465 484abcce0a440cbe7bcd93c4496ede89 196 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.9E-35 T 12-10-2018 N288_00465 484abcce0a440cbe7bcd93c4496ede89 196 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.9E-35 T 12-10-2018 N288_00465 484abcce0a440cbe7bcd93c4496ede89 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 3.0E-6 T 12-10-2018 N288_00465 484abcce0a440cbe7bcd93c4496ede89 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 3.0E-6 T 12-10-2018 N288_00465 484abcce0a440cbe7bcd93c4496ede89 196 Gene3D G3DSA:3.40.50.880 1 189 8.1E-61 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_00465 484abcce0a440cbe7bcd93c4496ede89 196 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 3.8E-86 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 N288_00465 484abcce0a440cbe7bcd93c4496ede89 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 2.1E-13 T 12-10-2018 N288_00465 484abcce0a440cbe7bcd93c4496ede89 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 2.1E-13 T 12-10-2018 N288_00465 484abcce0a440cbe7bcd93c4496ede89 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 2.1E-13 T 12-10-2018 N288_00465 484abcce0a440cbe7bcd93c4496ede89 196 SUPERFAMILY SSF52317 1 190 1.38E-55 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_00465 484abcce0a440cbe7bcd93c4496ede89 196 Pfam PF00117 Glutamine amidotransferase class-I 4 185 3.1E-54 T 12-10-2018 IPR017926 Glutamine amidotransferase N288_08015 8a2441e021b1ae53e0995c97c4ff6771 140 SUPERFAMILY SSF50475 5 133 4.49E-31 T 12-10-2018 N288_08015 8a2441e021b1ae53e0995c97c4ff6771 140 Gene3D G3DSA:2.30.110.10 3 138 4.7E-41 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 N288_08015 8a2441e021b1ae53e0995c97c4ff6771 140 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 7 135 1.0E-18 T 12-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain N288_08115 ff57bc44f349eca52162b4c38fdbe76f 37 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 6 28 1.6E-12 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like N288_08115 ff57bc44f349eca52162b4c38fdbe76f 37 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 5 28 2.8E-14 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like N288_25880 9e632601a9d5d2839abe133d98401e68 227 SMART SM00382 32 218 9.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_25880 9e632601a9d5d2839abe133d98401e68 227 Gene3D G3DSA:3.40.50.300 1 226 4.3E-69 T 12-10-2018 N288_25880 9e632601a9d5d2839abe133d98401e68 227 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_25880 9e632601a9d5d2839abe133d98401e68 227 Pfam PF00005 ABC transporter 23 169 2.6E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_25880 9e632601a9d5d2839abe133d98401e68 227 SUPERFAMILY SSF52540 3 221 2.08E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_03795 c7d11e4c91ee96791652c63bb3fae9b2 393 Gene3D G3DSA:1.20.1250.20 3 187 6.1E-30 T 12-10-2018 N288_03795 c7d11e4c91ee96791652c63bb3fae9b2 393 Pfam PF07690 Major Facilitator Superfamily 12 230 4.4E-24 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_03795 c7d11e4c91ee96791652c63bb3fae9b2 393 Gene3D G3DSA:1.20.1250.20 205 390 6.9E-20 T 12-10-2018 N288_03795 c7d11e4c91ee96791652c63bb3fae9b2 393 SUPERFAMILY SSF103473 3 379 3.27E-56 T 12-10-2018 IPR036259 MFS transporter superfamily N288_18240 1309ecc5d7f462df57ec5daf7bf6b652 544 Gene3D G3DSA:1.20.58.220 343 445 2.1E-14 T 12-10-2018 IPR038078 PhoU-like domain superfamily N288_18240 1309ecc5d7f462df57ec5daf7bf6b652 544 Gene3D G3DSA:1.20.58.220 449 543 2.2E-23 T 12-10-2018 IPR038078 PhoU-like domain superfamily N288_18240 1309ecc5d7f462df57ec5daf7bf6b652 544 SUPERFAMILY SSF109755 336 540 1.15E-51 T 12-10-2018 N288_18240 1309ecc5d7f462df57ec5daf7bf6b652 544 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 9 316 5.7E-75 T 12-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 N288_18240 1309ecc5d7f462df57ec5daf7bf6b652 544 Pfam PF02690 Na+/Pi-cotransporter 19 154 2.3E-52 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 N288_18240 1309ecc5d7f462df57ec5daf7bf6b652 544 Pfam PF02690 Na+/Pi-cotransporter 146 255 5.7E-21 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 N288_18240 1309ecc5d7f462df57ec5daf7bf6b652 544 Pfam PF01895 PhoU domain 454 538 2.5E-20 T 12-10-2018 IPR026022 PhoU domain N288_18240 1309ecc5d7f462df57ec5daf7bf6b652 544 Pfam PF01895 PhoU domain 350 435 1.8E-10 T 12-10-2018 IPR026022 PhoU domain N288_08315 186445b0c3f2ffe2ab5408c6319b1cc9 470 SUPERFAMILY SSF56176 5 217 3.74E-71 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 N288_08315 186445b0c3f2ffe2ab5408c6319b1cc9 470 TIGRFAM TIGR00387 glcD: glycolate oxidase, subunit GlcD 44 456 1.5E-181 T 12-10-2018 IPR004490 Glycolate oxidase subunit GlcD GO:0008891|GO:0009339 N288_08315 186445b0c3f2ffe2ab5408c6319b1cc9 470 Gene3D G3DSA:1.10.45.10 418 458 1.7E-12 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 N288_08315 186445b0c3f2ffe2ab5408c6319b1cc9 470 Gene3D G3DSA:3.30.465.40 3 237 2.2E-75 T 12-10-2018 N288_08315 186445b0c3f2ffe2ab5408c6319b1cc9 470 SUPERFAMILY SSF55103 220 460 1.8E-68 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 N288_08315 186445b0c3f2ffe2ab5408c6319b1cc9 470 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 457 6.3E-76 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 N288_08315 186445b0c3f2ffe2ab5408c6319b1cc9 470 Gene3D G3DSA:3.30.70.2740 336 417 8.4E-14 T 12-10-2018 N288_08315 186445b0c3f2ffe2ab5408c6319b1cc9 470 Pfam PF01565 FAD binding domain 41 180 1.2E-41 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 N288_18655 1c91405a6d194798c5c34a2aede9602f 378 PIRSF PIRSF001434 1 378 1.1E-151 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 N288_18655 1c91405a6d194798c5c34a2aede9602f 378 SUPERFAMILY SSF53383 5 378 1.75E-123 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_18655 1c91405a6d194798c5c34a2aede9602f 378 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 377 3.0E-160 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 N288_18655 1c91405a6d194798c5c34a2aede9602f 378 Gene3D G3DSA:3.90.1150.10 246 378 1.7E-55 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_18655 1c91405a6d194798c5c34a2aede9602f 378 Gene3D G3DSA:3.40.640.10 2 245 1.5E-94 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_18655 1c91405a6d194798c5c34a2aede9602f 378 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 187 201 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 N288_23750 372528fa1ac54a98468ba51c2cae1492 382 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 365 2.2E-118 T 12-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 N288_23750 372528fa1ac54a98468ba51c2cae1492 382 Gene3D G3DSA:3.40.50.2000 7 362 1.3E-153 T 12-10-2018 N288_23750 372528fa1ac54a98468ba51c2cae1492 382 SUPERFAMILY SSF53756 5 371 5.1E-136 T 12-10-2018 N288_23750 372528fa1ac54a98468ba51c2cae1492 382 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 5 368 3.1E-163 T 12-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 N288_23750 372528fa1ac54a98468ba51c2cae1492 382 Gene3D G3DSA:3.40.50.2000 192 352 1.3E-153 T 12-10-2018 N288_14950 67816a76a96e25302fdae9451bbf25ad 398 Pfam PF07690 Major Facilitator Superfamily 17 243 4.6E-33 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_14950 67816a76a96e25302fdae9451bbf25ad 398 ProSitePatterns PS00217 Sugar transport proteins signature 2. 310 335 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_14950 67816a76a96e25302fdae9451bbf25ad 398 SUPERFAMILY SSF103473 10 394 4.84E-64 T 12-10-2018 IPR036259 MFS transporter superfamily N288_14950 67816a76a96e25302fdae9451bbf25ad 398 Gene3D G3DSA:1.20.1250.20 10 389 3.1E-56 T 12-10-2018 N288_04700 bde0a38aa3a8c9a75041b3098ba2eb81 307 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 98 298 1.2E-58 T 12-10-2018 IPR010897 Sporulation stage II, protein P N288_04700 bde0a38aa3a8c9a75041b3098ba2eb81 307 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 82 295 1.2E-59 T 12-10-2018 IPR010897 Sporulation stage II, protein P N288_15645 d5664c3990a8cf3c019c0415df5c9c77 423 Gene3D G3DSA:1.20.1250.20 24 421 3.1E-68 T 12-10-2018 N288_15645 d5664c3990a8cf3c019c0415df5c9c77 423 PRINTS PR01035 Tetracycline resistance protein signature 192 212 4.0E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 N288_15645 d5664c3990a8cf3c019c0415df5c9c77 423 PRINTS PR01035 Tetracycline resistance protein signature 368 391 4.0E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 N288_15645 d5664c3990a8cf3c019c0415df5c9c77 423 PRINTS PR01035 Tetracycline resistance protein signature 105 129 4.0E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 N288_15645 d5664c3990a8cf3c019c0415df5c9c77 423 PRINTS PR01035 Tetracycline resistance protein signature 43 59 4.0E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 N288_15645 d5664c3990a8cf3c019c0415df5c9c77 423 PRINTS PR01035 Tetracycline resistance protein signature 164 186 4.0E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 N288_15645 d5664c3990a8cf3c019c0415df5c9c77 423 ProSitePatterns PS00216 Sugar transport proteins signature 1. 87 103 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_15645 d5664c3990a8cf3c019c0415df5c9c77 423 ProSitePatterns PS00217 Sugar transport proteins signature 2. 340 365 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_15645 d5664c3990a8cf3c019c0415df5c9c77 423 Pfam PF07690 Major Facilitator Superfamily 43 384 6.9E-55 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_15645 d5664c3990a8cf3c019c0415df5c9c77 423 SUPERFAMILY SSF103473 20 418 1.57E-70 T 12-10-2018 IPR036259 MFS transporter superfamily N288_11925 418644156546552bc1d650303a55a1b8 208 Gene3D G3DSA:3.40.50.360 4 196 2.2E-19 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_11925 418644156546552bc1d650303a55a1b8 208 SUPERFAMILY SSF52218 1 166 7.45E-33 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_11925 418644156546552bc1d650303a55a1b8 208 Pfam PF03358 NADPH-dependent FMN reductase 6 155 5.1E-17 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 N288_17920 03c7511dcb1cac9b3b45ab4515dd0b5d 353 Gene3D G3DSA:3.40.350.10 1 125 1.5E-37 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal N288_17920 03c7511dcb1cac9b3b45ab4515dd0b5d 353 Pfam PF00557 Metallopeptidase family M24 136 337 3.1E-67 T 12-10-2018 IPR000994 Peptidase M24 N288_17920 03c7511dcb1cac9b3b45ab4515dd0b5d 353 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 283 295 - T 12-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site N288_17920 03c7511dcb1cac9b3b45ab4515dd0b5d 353 Gene3D G3DSA:3.90.230.10 126 353 2.4E-84 T 12-10-2018 N288_17920 03c7511dcb1cac9b3b45ab4515dd0b5d 353 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 127 2.2E-29 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 N288_17920 03c7511dcb1cac9b3b45ab4515dd0b5d 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 305 317 2.4E-8 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_17920 03c7511dcb1cac9b3b45ab4515dd0b5d 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 223 2.4E-8 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_17920 03c7511dcb1cac9b3b45ab4515dd0b5d 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 274 286 2.4E-8 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_17920 03c7511dcb1cac9b3b45ab4515dd0b5d 353 SUPERFAMILY SSF55920 85 347 6.41E-83 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like N288_17920 03c7511dcb1cac9b3b45ab4515dd0b5d 353 SUPERFAMILY SSF53092 2 126 8.63E-30 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal N288_12410 9828e78e6a843f556de3f0e960b77c48 554 SUPERFAMILY SSF56801 5 541 1.01E-156 T 12-10-2018 N288_12410 9828e78e6a843f556de3f0e960b77c48 554 ProSitePatterns PS00455 Putative AMP-binding domain signature. 195 206 - T 12-10-2018 IPR020845 AMP-binding, conserved site N288_12410 9828e78e6a843f556de3f0e960b77c48 554 Gene3D G3DSA:3.40.50.980 37 211 6.0E-122 T 12-10-2018 N288_12410 9828e78e6a843f556de3f0e960b77c48 554 Gene3D G3DSA:3.40.50.980 34 354 6.0E-122 T 12-10-2018 N288_12410 9828e78e6a843f556de3f0e960b77c48 554 Pfam PF00501 AMP-binding enzyme 14 445 2.9E-110 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 N288_12410 9828e78e6a843f556de3f0e960b77c48 554 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 529 4.0E-18 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain N288_12410 9828e78e6a843f556de3f0e960b77c48 554 Gene3D G3DSA:2.30.38.10 355 438 6.0E-122 T 12-10-2018 N288_12410 9828e78e6a843f556de3f0e960b77c48 554 Gene3D G3DSA:3.30.300.310 441 545 5.2E-33 T 12-10-2018 N288_14570 bba042613f4573d18baa0170b2244f60 283 Gene3D G3DSA:1.10.10.60 58 115 1.4E-15 T 12-10-2018 N288_14570 bba042613f4573d18baa0170b2244f60 283 Pfam PF14526 Integron-associated effector binding protein 131 282 1.1E-31 T 12-10-2018 IPR029441 Integron-associated effector binding protein N288_14570 bba042613f4573d18baa0170b2244f60 283 SMART SM00342 21 104 3.6E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_14570 bba042613f4573d18baa0170b2244f60 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.4E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 N288_14570 bba042613f4573d18baa0170b2244f60 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.4E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 N288_14570 bba042613f4573d18baa0170b2244f60 283 SMART SM00871 128 283 9.7E-37 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding N288_14570 bba042613f4573d18baa0170b2244f60 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 N288_14570 bba042613f4573d18baa0170b2244f60 283 Pfam PF12833 Helix-turn-helix domain 28 105 3.5E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_14570 bba042613f4573d18baa0170b2244f60 283 SUPERFAMILY SSF46689 6 55 4.12E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_14570 bba042613f4573d18baa0170b2244f60 283 Gene3D G3DSA:1.10.10.60 4 57 7.4E-15 T 12-10-2018 N288_14570 bba042613f4573d18baa0170b2244f60 283 Gene3D G3DSA:3.20.80.10 128 283 5.9E-50 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily N288_14570 bba042613f4573d18baa0170b2244f60 283 SUPERFAMILY SSF55136 128 283 1.78E-33 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily N288_14570 bba042613f4573d18baa0170b2244f60 283 SUPERFAMILY SSF46689 57 110 2.87E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_10305 2ad4a85f5659134481fa2121dda7f48e 173 Gene3D G3DSA:2.60.40.3830 26 171 9.4E-10 T 12-10-2018 N288_10480 8818a7fffe900e7a840312d7c574a44a 276 ProDom PD119415 TRANSGLUTAMINASE TRANSFERASE ACYLTRANSFERASE GAMMA-GLUTAMYLTRANSFERASE PROTEIN-GLUTAMINE TGASE SPORULATION TGL 1 233 1.0E-72 T 12-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 N288_10480 8818a7fffe900e7a840312d7c574a44a 276 Hamap MF_00727 Protein-glutamine gamma-glutamyltransferase [tgl]. 1 244 43.093 T 12-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 N288_24860 0a42ac3d243b500c9f772e6f7bdce499 245 Gene3D G3DSA:1.10.1660.10 2 139 2.8E-28 T 12-10-2018 N288_24860 0a42ac3d243b500c9f772e6f7bdce499 245 SUPERFAMILY SSF46955 4 111 3.59E-26 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily N288_24860 0a42ac3d243b500c9f772e6f7bdce499 245 SMART SM00422 4 73 3.2E-22 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_24860 0a42ac3d243b500c9f772e6f7bdce499 245 Pfam PF13411 MerR HTH family regulatory protein 5 72 2.8E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_07810 49102ebf428ef28d9eab790e7ce70125 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 181 0.0014 T 12-10-2018 N288_07810 49102ebf428ef28d9eab790e7ce70125 257 SUPERFAMILY SSF51735 10 256 6.48E-85 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_07810 49102ebf428ef28d9eab790e7ce70125 257 Gene3D G3DSA:3.40.50.720 2 257 1.3E-84 T 12-10-2018 N288_07810 49102ebf428ef28d9eab790e7ce70125 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 255 5.2E-63 T 12-10-2018 N288_07810 49102ebf428ef28d9eab790e7ce70125 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 2.7E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07810 49102ebf428ef28d9eab790e7ce70125 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 2.7E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07810 49102ebf428ef28d9eab790e7ce70125 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 2.7E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07810 49102ebf428ef28d9eab790e7ce70125 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_07810 49102ebf428ef28d9eab790e7ce70125 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 2.8E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07810 49102ebf428ef28d9eab790e7ce70125 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 2.8E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07810 49102ebf428ef28d9eab790e7ce70125 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 2.8E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07810 49102ebf428ef28d9eab790e7ce70125 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 2.8E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07810 49102ebf428ef28d9eab790e7ce70125 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 2.8E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07810 49102ebf428ef28d9eab790e7ce70125 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 2.8E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_19935 85d493f5ca7ec334d4d5883811595ae4 109 SUPERFAMILY SSF52833 3 93 1.43E-7 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_19935 85d493f5ca7ec334d4d5883811595ae4 109 TIGRFAM TIGR04019 B_thiol_YtxJ: bacillithiol system protein YtxJ 2 102 4.7E-37 T 12-10-2018 IPR022551 Protein of unknown function DUF2847 N288_19935 85d493f5ca7ec334d4d5883811595ae4 109 Pfam PF11009 Protein of unknown function (DUF2847) 2 101 1.0E-35 T 12-10-2018 IPR022551 Protein of unknown function DUF2847 N288_19935 85d493f5ca7ec334d4d5883811595ae4 109 Gene3D G3DSA:3.40.30.10 1 106 7.3E-38 T 12-10-2018 N288_19225 abd8ed07b8453c9d071397d6e409adb1 260 SMART SM00079 37 251 5.8E-4 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 N288_19225 abd8ed07b8453c9d071397d6e409adb1 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 251 5.6E-56 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF N288_19225 abd8ed07b8453c9d071397d6e409adb1 260 Gene3D G3DSA:3.40.190.10 35 248 4.2E-59 T 12-10-2018 N288_19225 abd8ed07b8453c9d071397d6e409adb1 260 SUPERFAMILY SSF53850 2 253 1.69E-59 T 12-10-2018 N288_19225 abd8ed07b8453c9d071397d6e409adb1 260 Gene3D G3DSA:3.40.190.10 121 214 4.2E-59 T 12-10-2018 N288_19225 abd8ed07b8453c9d071397d6e409adb1 260 SMART SM00062 37 252 1.2E-51 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF N288_19225 abd8ed07b8453c9d071397d6e409adb1 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 60 73 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site N288_13570 70f9d228e80917d949cf31e6c1c2d2e0 289 Gene3D G3DSA:2.60.120.10 33 281 1.2E-74 T 12-10-2018 IPR014710 RmlC-like jelly roll fold N288_13570 70f9d228e80917d949cf31e6c1c2d2e0 289 SUPERFAMILY SSF51182 31 285 2.24E-67 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily N288_13570 70f9d228e80917d949cf31e6c1c2d2e0 289 PIRSF PIRSF006232 23 288 1.3E-65 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 N288_13570 70f9d228e80917d949cf31e6c1c2d2e0 289 Gene3D G3DSA:2.60.120.10 143 254 1.2E-74 T 12-10-2018 IPR014710 RmlC-like jelly roll fold N288_13570 70f9d228e80917d949cf31e6c1c2d2e0 289 Pfam PF05726 Pirin C-terminal cupin domain 176 285 1.7E-28 T 12-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 N288_13570 70f9d228e80917d949cf31e6c1c2d2e0 289 Pfam PF02678 Pirin 49 121 3.3E-19 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 N288_11525 8020ff26211e476be8551fee25d4ad29 391 Pfam PF00364 Biotin-requiring enzyme 2 73 8.0E-18 T 12-10-2018 IPR000089 Biotin/lipoyl attachment N288_11525 8020ff26211e476be8551fee25d4ad29 391 SUPERFAMILY SSF51230 2 91 4.84E-24 T 12-10-2018 IPR011053 Single hybrid motif N288_11525 8020ff26211e476be8551fee25d4ad29 391 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 162 388 1.9E-77 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 N288_11525 8020ff26211e476be8551fee25d4ad29 391 Pfam PF02817 e3 binding domain 97 131 5.8E-12 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 N288_11525 8020ff26211e476be8551fee25d4ad29 391 Gene3D G3DSA:2.40.50.100 1 87 1.4E-23 T 12-10-2018 N288_11525 8020ff26211e476be8551fee25d4ad29 391 SUPERFAMILY SSF47005 93 136 1.31E-10 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 N288_11525 8020ff26211e476be8551fee25d4ad29 391 SUPERFAMILY SSF52777 157 388 1.87E-70 T 12-10-2018 N288_11525 8020ff26211e476be8551fee25d4ad29 391 Gene3D G3DSA:4.10.320.10 88 138 2.0E-14 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 N288_11525 8020ff26211e476be8551fee25d4ad29 391 Gene3D G3DSA:3.30.559.10 149 388 2.1E-74 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR00418 DNA topoisomerase II family signature 40 55 6.3E-74 T 12-10-2018 N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR00418 DNA topoisomerase II family signature 75 88 6.3E-74 T 12-10-2018 N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR00418 DNA topoisomerase II family signature 118 132 6.3E-74 T 12-10-2018 N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR00418 DNA topoisomerase II family signature 426 440 6.3E-74 T 12-10-2018 N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR00418 DNA topoisomerase II family signature 572 588 6.3E-74 T 12-10-2018 N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR00418 DNA topoisomerase II family signature 274 287 6.3E-74 T 12-10-2018 N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR00418 DNA topoisomerase II family signature 492 508 6.3E-74 T 12-10-2018 N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR00418 DNA topoisomerase II family signature 530 542 6.3E-74 T 12-10-2018 N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR00418 DNA topoisomerase II family signature 510 527 6.3E-74 T 12-10-2018 N288_00035 d9b5695353592386ee710178fbf99080 640 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 8 640 98.658 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 N288_00035 d9b5695353592386ee710178fbf99080 640 Gene3D G3DSA:3.30.565.10 7 225 8.1E-94 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_00035 d9b5695353592386ee710178fbf99080 640 Gene3D G3DSA:3.40.50.670 405 640 3.6E-111 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 N288_00035 d9b5695353592386ee710178fbf99080 640 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 569 629 2.4E-31 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_00035 d9b5695353592386ee710178fbf99080 640 SUPERFAMILY SSF55874 11 221 5.24E-74 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_00035 d9b5695353592386ee710178fbf99080 640 Gene3D G3DSA:3.30.230.10 226 404 8.1E-75 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup N288_00035 d9b5695353592386ee710178fbf99080 640 SUPERFAMILY SSF56719 400 631 1.18E-92 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 N288_00035 d9b5695353592386ee710178fbf99080 640 SUPERFAMILY SSF54211 227 397 1.29E-64 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR01159 DNA gyrase subunit B signature 201 214 5.0E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR01159 DNA gyrase subunit B signature 11 21 5.0E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR01159 DNA gyrase subunit B signature 609 625 5.0E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR01159 DNA gyrase subunit B signature 186 201 5.0E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR01159 DNA gyrase subunit B signature 380 400 5.0E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR01159 DNA gyrase subunit B signature 366 380 5.0E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR01159 DNA gyrase subunit B signature 318 334 5.0E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR01159 DNA gyrase subunit B signature 476 485 5.0E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR01159 DNA gyrase subunit B signature 226 248 5.0E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_00035 d9b5695353592386ee710178fbf99080 640 PRINTS PR01159 DNA gyrase subunit B signature 593 605 5.0E-79 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 N288_00035 d9b5695353592386ee710178fbf99080 640 Pfam PF00204 DNA gyrase B 227 396 2.3E-65 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 N288_00035 d9b5695353592386ee710178fbf99080 640 SMART SM00433 40 633 0.0 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 N288_00035 d9b5695353592386ee710178fbf99080 640 Pfam PF01751 Toprim domain 425 536 2.8E-18 T 12-10-2018 IPR006171 TOPRIM domain N288_00035 d9b5695353592386ee710178fbf99080 640 SMART SM00387 36 180 2.9E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_00035 d9b5695353592386ee710178fbf99080 640 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 178 4.8E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_00035 d9b5695353592386ee710178fbf99080 640 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 11 640 0.0 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 N288_00035 d9b5695353592386ee710178fbf99080 640 ProSitePatterns PS00177 DNA topoisomerase II signature. 428 436 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 N288_23985 daebcf081875a57a32db1219ce564854 147 Pfam PF09148 Domain of unknown function (DUF1934) 13 140 3.2E-30 T 12-10-2018 IPR015231 Protein of unknown function DUF1934 N288_23985 daebcf081875a57a32db1219ce564854 147 Gene3D G3DSA:2.40.128.20 1 147 6.7E-48 T 12-10-2018 IPR012674 Calycin N288_23985 daebcf081875a57a32db1219ce564854 147 SUPERFAMILY SSF50814 7 144 5.14E-32 T 12-10-2018 IPR012674 Calycin N288_22900 78c751c9041ee1a9f343a2645126608b 411 Gene3D G3DSA:1.50.10.10 1 411 7.2E-120 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 N288_22900 78c751c9041ee1a9f343a2645126608b 411 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 30 391 1.9E-27 T 12-10-2018 N288_22900 78c751c9041ee1a9f343a2645126608b 411 SUPERFAMILY SSF48208 3 410 4.81E-68 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 N288_20295 42d6baa7e4da270285c8fb3c1c05754c 266 Gene3D G3DSA:3.40.50.1820 22 262 3.8E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_20295 42d6baa7e4da270285c8fb3c1c05754c 266 Pfam PF00326 Prolyl oligopeptidase family 66 258 6.5E-20 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 N288_20295 42d6baa7e4da270285c8fb3c1c05754c 266 SUPERFAMILY SSF53474 15 256 5.09E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_13020 4b8a4f37f7ea51d93fb53b884eed1110 283 SUPERFAMILY SSF51735 4 254 9.71E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_13020 4b8a4f37f7ea51d93fb53b884eed1110 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.2E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13020 4b8a4f37f7ea51d93fb53b884eed1110 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.2E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13020 4b8a4f37f7ea51d93fb53b884eed1110 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.2E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13020 4b8a4f37f7ea51d93fb53b884eed1110 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.2E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13020 4b8a4f37f7ea51d93fb53b884eed1110 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 3.2E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13020 4b8a4f37f7ea51d93fb53b884eed1110 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.2E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13020 4b8a4f37f7ea51d93fb53b884eed1110 283 Gene3D G3DSA:3.40.50.720 4 267 4.7E-68 T 12-10-2018 N288_13020 4b8a4f37f7ea51d93fb53b884eed1110 283 Pfam PF00106 short chain dehydrogenase 5 192 7.7E-50 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13020 4b8a4f37f7ea51d93fb53b884eed1110 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.9E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13020 4b8a4f37f7ea51d93fb53b884eed1110 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.9E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13020 4b8a4f37f7ea51d93fb53b884eed1110 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.9E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13020 4b8a4f37f7ea51d93fb53b884eed1110 283 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_04725 0727a05f766612a30d48bf7d767dad48 212 SUPERFAMILY SSF51735 1 198 5.55E-22 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_04725 0727a05f766612a30d48bf7d767dad48 212 Pfam PF13460 NAD(P)H-binding 12 184 4.9E-26 T 12-10-2018 IPR016040 NAD(P)-binding domain N288_04725 0727a05f766612a30d48bf7d767dad48 212 Gene3D G3DSA:3.40.50.720 1 211 5.4E-34 T 12-10-2018 N288_10040 220adb45d8a08b011f5bc0d51d0df12d 250 Pfam PF00574 Clp protease 49 225 3.3E-32 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA N288_10040 220adb45d8a08b011f5bc0d51d0df12d 250 Gene3D G3DSA:3.90.226.10 41 226 7.4E-30 T 12-10-2018 N288_10040 220adb45d8a08b011f5bc0d51d0df12d 250 SUPERFAMILY SSF52096 35 233 3.77E-37 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_13650 6d0844afda56291375c94e34342e236f 145 SUPERFAMILY SSF55729 1 130 1.67E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_13650 6d0844afda56291375c94e34342e236f 145 Gene3D G3DSA:3.40.630.30 43 141 1.3E-18 T 12-10-2018 N288_13650 6d0844afda56291375c94e34342e236f 145 Pfam PF00583 Acetyltransferase (GNAT) family 35 128 3.0E-13 T 12-10-2018 IPR000182 GNAT domain N288_12550 10c82661630d85c572a836924bd2670a 438 Gene3D G3DSA:3.30.465.10 350 438 7.7E-16 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 N288_12550 10c82661630d85c572a836924bd2670a 438 Pfam PF00571 CBS domain 290 339 2.4E-4 T 12-10-2018 IPR000644 CBS domain N288_12550 10c82661630d85c572a836924bd2670a 438 Pfam PF00571 CBS domain 218 273 1.2E-9 T 12-10-2018 IPR000644 CBS domain N288_12550 10c82661630d85c572a836924bd2670a 438 SMART SM00116 226 275 0.081 T 12-10-2018 IPR000644 CBS domain N288_12550 10c82661630d85c572a836924bd2670a 438 SMART SM00116 291 339 42.0 T 12-10-2018 IPR000644 CBS domain N288_12550 10c82661630d85c572a836924bd2670a 438 SUPERFAMILY SSF54631 205 342 2.15E-33 T 12-10-2018 N288_12550 10c82661630d85c572a836924bd2670a 438 SMART SM01091 355 432 9.4E-22 T 12-10-2018 IPR005170 Transporter-associated domain N288_12550 10c82661630d85c572a836924bd2670a 438 Gene3D G3DSA:3.10.580.10 196 349 6.8E-51 T 12-10-2018 N288_12550 10c82661630d85c572a836924bd2670a 438 SUPERFAMILY SSF56176 353 437 1.23E-17 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 N288_12550 10c82661630d85c572a836924bd2670a 438 Pfam PF03471 Transporter associated domain 356 430 2.3E-17 T 12-10-2018 IPR005170 Transporter-associated domain N288_12550 10c82661630d85c572a836924bd2670a 438 Pfam PF01595 Domain of unknown function DUF21 9 202 4.4E-48 T 12-10-2018 IPR002550 CNNM, transmembrane domain N288_04300 0e1d53a3edd9829d0e59def33dce8e83 209 Gene3D G3DSA:3.40.50.880 1 209 5.4E-51 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_04300 0e1d53a3edd9829d0e59def33dce8e83 209 Pfam PF01965 DJ-1/PfpI family 4 176 9.7E-32 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 N288_04300 0e1d53a3edd9829d0e59def33dce8e83 209 SUPERFAMILY SSF52317 4 178 1.79E-32 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_06150 e618a6ea46e5908f2787c8d5d68021f3 282 Pfam PF01380 SIS domain 128 256 2.4E-22 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 N288_06150 e618a6ea46e5908f2787c8d5d68021f3 282 Gene3D G3DSA:1.10.10.10 2 83 6.3E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_06150 e618a6ea46e5908f2787c8d5d68021f3 282 Gene3D G3DSA:3.40.50.10490 96 281 5.8E-50 T 12-10-2018 N288_06150 e618a6ea46e5908f2787c8d5d68021f3 282 SUPERFAMILY SSF46689 7 78 1.7E-22 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_06150 e618a6ea46e5908f2787c8d5d68021f3 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 77 1.8E-24 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 N288_06150 e618a6ea46e5908f2787c8d5d68021f3 282 SUPERFAMILY SSF53697 93 279 9.41E-47 T 12-10-2018 N288_14695 6e38dc051b8df9cb15700fea9d7e8e5b 534 Pfam PF13786 Domain of unknown function (DUF4179) 83 162 3.5E-11 T 12-10-2018 IPR025436 Domain of unknown function DUF4179 N288_14695 6e38dc051b8df9cb15700fea9d7e8e5b 534 Gene3D G3DSA:2.60.40.1630 108 247 1.4E-5 T 12-10-2018 N288_14695 6e38dc051b8df9cb15700fea9d7e8e5b 534 Pfam PF13490 Putative zinc-finger 7 36 2.7E-5 T 12-10-2018 IPR027383 Putative zinc-finger N288_19195 db295d04bfaf007973dbada19811a8ce 311 SUPERFAMILY SSF54782 222 308 4.05E-23 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 N288_19195 db295d04bfaf007973dbada19811a8ce 311 Gene3D G3DSA:3.40.190.10 4 209 4.0E-85 T 12-10-2018 N288_19195 db295d04bfaf007973dbada19811a8ce 311 Gene3D G3DSA:3.40.190.10 101 201 4.0E-85 T 12-10-2018 N288_19195 db295d04bfaf007973dbada19811a8ce 311 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 39.247 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 N288_19195 db295d04bfaf007973dbada19811a8ce 311 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 295 8.2E-111 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 N288_19195 db295d04bfaf007973dbada19811a8ce 311 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 293 6.3E-21 T 12-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 N288_19195 db295d04bfaf007973dbada19811a8ce 311 SUPERFAMILY SSF53850 2 216 2.71E-81 T 12-10-2018 N288_19195 db295d04bfaf007973dbada19811a8ce 311 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 212 1.3E-81 T 12-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 N288_19195 db295d04bfaf007973dbada19811a8ce 311 Gene3D G3DSA:3.30.160.40 221 304 3.3E-30 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 N288_19195 db295d04bfaf007973dbada19811a8ce 311 PIRSF PIRSF001438 1 309 2.0E-123 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 N288_19195 db295d04bfaf007973dbada19811a8ce 311 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 12-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 N288_19195 db295d04bfaf007973dbada19811a8ce 311 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 1.5E-50 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 N288_19195 db295d04bfaf007973dbada19811a8ce 311 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 1.5E-50 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 N288_19195 db295d04bfaf007973dbada19811a8ce 311 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 1.5E-50 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 N288_19195 db295d04bfaf007973dbada19811a8ce 311 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 1.5E-50 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 N288_19195 db295d04bfaf007973dbada19811a8ce 311 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 1.5E-50 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 N288_06120 29e7a7f97653e63ca2f2595196bf2f95 457 Gene3D G3DSA:1.10.287.130 245 307 2.7E-15 T 12-10-2018 N288_06120 29e7a7f97653e63ca2f2595196bf2f95 457 SMART SM00387 351 457 1.4E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_06120 29e7a7f97653e63ca2f2595196bf2f95 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 457 7.6E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_06120 29e7a7f97653e63ca2f2595196bf2f95 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 2.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06120 29e7a7f97653e63ca2f2595196bf2f95 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 2.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06120 29e7a7f97653e63ca2f2595196bf2f95 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 2.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06120 29e7a7f97653e63ca2f2595196bf2f95 457 SUPERFAMILY SSF55874 295 457 4.98E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_06120 29e7a7f97653e63ca2f2595196bf2f95 457 Pfam PF00672 HAMP domain 188 235 1.8E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_06120 29e7a7f97653e63ca2f2595196bf2f95 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 241 305 1.1E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_06120 29e7a7f97653e63ca2f2595196bf2f95 457 SUPERFAMILY SSF158472 188 235 1.03E-9 T 12-10-2018 N288_06120 29e7a7f97653e63ca2f2595196bf2f95 457 Gene3D G3DSA:3.30.565.10 310 457 6.3E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_06120 29e7a7f97653e63ca2f2595196bf2f95 457 Gene3D G3DSA:1.20.1480.50 151 244 1.8E-14 T 12-10-2018 N288_06120 29e7a7f97653e63ca2f2595196bf2f95 457 SUPERFAMILY SSF47384 223 306 1.12E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_06120 29e7a7f97653e63ca2f2595196bf2f95 457 SMART SM00304 187 239 2.7E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_06120 29e7a7f97653e63ca2f2595196bf2f95 457 SMART SM00388 240 305 3.1E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_00680 7d796e95c1b5bdbe31fdfbaa99c71333 232 PIRSF PIRSF002155 1 227 9.3E-83 T 12-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00680 7d796e95c1b5bdbe31fdfbaa99c71333 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 2.6E-107 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 N288_00680 7d796e95c1b5bdbe31fdfbaa99c71333 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 12-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00680 7d796e95c1b5bdbe31fdfbaa99c71333 232 Gene3D G3DSA:3.30.190.20 21 225 2.1E-86 T 12-10-2018 N288_00680 7d796e95c1b5bdbe31fdfbaa99c71333 232 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 1.4E-57 T 12-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein N288_00680 7d796e95c1b5bdbe31fdfbaa99c71333 232 Gene3D G3DSA:3.40.50.790 68 159 2.1E-86 T 12-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich N288_00680 7d796e95c1b5bdbe31fdfbaa99c71333 232 SUPERFAMILY SSF56808 6 226 3.01E-86 T 12-10-2018 IPR023674 Ribosomal protein L1-like N288_00680 7d796e95c1b5bdbe31fdfbaa99c71333 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 44.59 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 N288_06015 b4b8b476a2155e257350af74d25e2dcc 241 Pfam PF07556 Protein of unknown function (DUF1538) 24 232 2.8E-76 T 12-10-2018 IPR011435 Protein of unknown function DUF1538 N288_25415 d48e26caaac30562c7e4ebee05384189 713 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 40 709 0.0 T 12-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 N288_25415 d48e26caaac30562c7e4ebee05384189 713 Pfam PF00122 E1-E2 ATPase 139 315 1.3E-34 T 12-10-2018 N288_25415 d48e26caaac30562c7e4ebee05384189 713 SUPERFAMILY SSF81665 59 678 5.75E-12 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 N288_25415 d48e26caaac30562c7e4ebee05384189 713 Pfam PF00702 haloacid dehalogenase-like hydrolase 334 563 6.0E-32 T 12-10-2018 N288_25415 d48e26caaac30562c7e4ebee05384189 713 Gene3D G3DSA:1.20.1110.10 594 639 3.4E-26 T 12-10-2018 N288_25415 d48e26caaac30562c7e4ebee05384189 713 Gene3D G3DSA:2.70.150.20 138 245 5.0E-27 T 12-10-2018 N288_25415 d48e26caaac30562c7e4ebee05384189 713 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 187 201 4.6E-26 T 12-10-2018 N288_25415 d48e26caaac30562c7e4ebee05384189 713 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 474 485 4.6E-26 T 12-10-2018 N288_25415 d48e26caaac30562c7e4ebee05384189 713 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 338 352 4.6E-26 T 12-10-2018 N288_25415 d48e26caaac30562c7e4ebee05384189 713 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 496 506 4.6E-26 T 12-10-2018 N288_25415 d48e26caaac30562c7e4ebee05384189 713 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 572 584 4.6E-26 T 12-10-2018 N288_25415 d48e26caaac30562c7e4ebee05384189 713 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 549 568 4.6E-26 T 12-10-2018 N288_25415 d48e26caaac30562c7e4ebee05384189 713 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 340 346 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 N288_25415 d48e26caaac30562c7e4ebee05384189 713 SUPERFAMILY SSF56784 326 592 3.79E-42 T 12-10-2018 IPR036412 HAD-like superfamily N288_25415 d48e26caaac30562c7e4ebee05384189 713 SUPERFAMILY SSF81653 146 240 1.57E-21 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 N288_25415 d48e26caaac30562c7e4ebee05384189 713 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 43 713 40.063 T 12-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 N288_25415 d48e26caaac30562c7e4ebee05384189 713 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 108 360 1.1E-31 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 N288_25415 d48e26caaac30562c7e4ebee05384189 713 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 404 637 3.9E-49 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 N288_25415 d48e26caaac30562c7e4ebee05384189 713 Gene3D G3DSA:3.40.50.1000 524 593 3.4E-26 T 12-10-2018 IPR023214 HAD superfamily N288_25415 d48e26caaac30562c7e4ebee05384189 713 Gene3D G3DSA:3.40.1110.10 349 484 7.2E-43 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 N288_09520 bb6cca85218cae5125d111c1281f4181 329 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 294 307 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 N288_09520 bb6cca85218cae5125d111c1281f4181 329 Pfam PF02881 SRP54-type protein, helical bundle domain 33 99 3.8E-16 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 N288_09520 bb6cca85218cae5125d111c1281f4181 329 SUPERFAMILY SSF52540 121 319 2.58E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_09520 bb6cca85218cae5125d111c1281f4181 329 SMART SM00382 119 299 1.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_09520 bb6cca85218cae5125d111c1281f4181 329 Gene3D G3DSA:3.40.50.300 107 309 2.0E-115 T 12-10-2018 N288_09520 bb6cca85218cae5125d111c1281f4181 329 Pfam PF00448 SRP54-type protein, GTPase domain 121 320 2.6E-81 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 N288_09520 bb6cca85218cae5125d111c1281f4181 329 Gene3D G3DSA:1.20.120.140 20 318 2.0E-115 T 12-10-2018 N288_09520 bb6cca85218cae5125d111c1281f4181 329 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 46 320 1.1E-117 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 N288_09520 bb6cca85218cae5125d111c1281f4181 329 SMART SM00962 120 321 3.7E-121 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 N288_09520 bb6cca85218cae5125d111c1281f4181 329 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 46 321 64.87 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 N288_09520 bb6cca85218cae5125d111c1281f4181 329 SUPERFAMILY SSF47364 18 96 5.1E-22 T 12-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 N288_09520 bb6cca85218cae5125d111c1281f4181 329 SMART SM00963 22 103 4.7E-28 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 N288_04105 40a79cabdf7755d12a9067eabff21bff 102 Gene3D G3DSA:1.10.8.200 3 63 9.9E-9 T 12-10-2018 N288_19875 eebf0e924b8b614a60b39cec05337131 418 Gene3D G3DSA:3.40.50.620 1 222 3.5E-91 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_19875 eebf0e924b8b614a60b39cec05337131 418 Gene3D G3DSA:3.10.290.10 326 418 6.2E-35 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 N288_19875 eebf0e924b8b614a60b39cec05337131 418 SMART SM00363 353 414 5.7E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_19875 eebf0e924b8b614a60b39cec05337131 418 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 418 45.839 T 12-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 N288_19875 eebf0e924b8b614a60b39cec05337131 418 SUPERFAMILY SSF55174 321 417 4.19E-24 T 12-10-2018 N288_19875 eebf0e924b8b614a60b39cec05337131 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 5.0E-30 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 N288_19875 eebf0e924b8b614a60b39cec05337131 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 5.0E-30 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 N288_19875 eebf0e924b8b614a60b39cec05337131 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 43 65 5.0E-30 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 N288_19875 eebf0e924b8b614a60b39cec05337131 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 216 228 5.0E-30 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 N288_19875 eebf0e924b8b614a60b39cec05337131 418 SUPERFAMILY SSF52374 2 323 8.19E-111 T 12-10-2018 N288_19875 eebf0e924b8b614a60b39cec05337131 418 Pfam PF01479 S4 domain 355 399 2.2E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_19875 eebf0e924b8b614a60b39cec05337131 418 Gene3D G3DSA:1.10.240.10 223 325 3.4E-40 T 12-10-2018 N288_19875 eebf0e924b8b614a60b39cec05337131 418 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 49 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_19875 eebf0e924b8b614a60b39cec05337131 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 417 4.7E-138 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 N288_19875 eebf0e924b8b614a60b39cec05337131 418 Pfam PF00579 tRNA synthetases class I (W and Y) 28 323 3.6E-85 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_14070 dae430dd9b0752f0c4d43f8cb0b820d2 140 SUPERFAMILY SSF53927 8 139 1.22E-25 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 N288_14070 dae430dd9b0752f0c4d43f8cb0b820d2 140 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 60 108 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 N288_14070 dae430dd9b0752f0c4d43f8cb0b820d2 140 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 11 115 2.1E-8 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain N288_14070 dae430dd9b0752f0c4d43f8cb0b820d2 140 Gene3D G3DSA:3.40.140.10 9 140 4.6E-30 T 12-10-2018 N288_09040 d5530202ee357bd3c7ca4a0d628939e2 91 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 5 74 3.8E-31 T 12-10-2018 IPR016979 Protein of unknown function DUF2129 N288_09040 d5530202ee357bd3c7ca4a0d628939e2 91 Hamap MF_01126 UPF0298 protein . 1 78 22.409 T 12-10-2018 IPR016979 Protein of unknown function DUF2129 N288_09040 d5530202ee357bd3c7ca4a0d628939e2 91 PIRSF PIRSF031653 1 91 1.0E-35 T 12-10-2018 IPR016979 Protein of unknown function DUF2129 N288_19410 639473dfe05755a9cd798e6798846625 227 Gene3D G3DSA:1.10.357.10 83 227 4.0E-38 T 12-10-2018 N288_19410 639473dfe05755a9cd798e6798846625 227 SUPERFAMILY SSF46689 35 115 3.59E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_19410 639473dfe05755a9cd798e6798846625 227 Gene3D G3DSA:1.10.10.60 33 82 4.1E-22 T 12-10-2018 N288_19410 639473dfe05755a9cd798e6798846625 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 44 89 8.4E-17 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_19410 639473dfe05755a9cd798e6798846625 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 57 4.5E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_19410 639473dfe05755a9cd798e6798846625 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 65 88 4.5E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_19410 639473dfe05755a9cd798e6798846625 227 SUPERFAMILY SSF48498 111 224 6.81E-28 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily N288_19410 639473dfe05755a9cd798e6798846625 227 Pfam PF08359 YsiA-like protein, C-terminal region 91 223 1.5E-61 T 12-10-2018 IPR013570 Transcription regulator YsiA, C-terminal N288_00920 82357f0051ca88d1a093528e91366602 130 SUPERFAMILY SSF54211 5 130 3.22E-50 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_00920 82357f0051ca88d1a093528e91366602 130 Gene3D G3DSA:3.30.230.10 1 130 1.3E-52 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup N288_00920 82357f0051ca88d1a093528e91366602 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 12-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 N288_00920 82357f0051ca88d1a093528e91366602 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 35.102 T 12-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid N288_00920 82357f0051ca88d1a093528e91366602 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.2E-47 T 12-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 N288_22455 aac789ee1a1da4f79b32d6c95e36cc6a 423 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 419 2.3E-133 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 N288_22455 aac789ee1a1da4f79b32d6c95e36cc6a 423 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 414 3.2E-126 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit N288_22455 aac789ee1a1da4f79b32d6c95e36cc6a 423 PIRSF PIRSF006066 1 423 3.4E-157 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 N288_16100 a6c4f4d78e595cd3f3b81bd42f87768f 68 Pfam PF00403 Heavy-metal-associated domain 5 65 1.2E-16 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 N288_16100 a6c4f4d78e595cd3f3b81bd42f87768f 68 SUPERFAMILY SSF55008 2 67 1.96E-18 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 N288_16100 a6c4f4d78e595cd3f3b81bd42f87768f 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 N288_16100 a6c4f4d78e595cd3f3b81bd42f87768f 68 Gene3D G3DSA:3.30.70.100 1 67 6.9E-19 T 12-10-2018 N288_16100 a6c4f4d78e595cd3f3b81bd42f87768f 68 PRINTS PR00944 Copper ion binding protein signature 54 67 1.5E-6 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 N288_16100 a6c4f4d78e595cd3f3b81bd42f87768f 68 PRINTS PR00944 Copper ion binding protein signature 3 15 1.5E-6 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 N288_16100 a6c4f4d78e595cd3f3b81bd42f87768f 68 PRINTS PR00944 Copper ion binding protein signature 15 28 1.5E-6 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 N288_16100 a6c4f4d78e595cd3f3b81bd42f87768f 68 PRINTS PR00944 Copper ion binding protein signature 28 41 1.5E-6 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 N288_07035 b26a5afeffb101f48f5006575761ba76 519 Gene3D G3DSA:3.40.50.12780 2 418 3.0E-130 T 12-10-2018 N288_07035 b26a5afeffb101f48f5006575761ba76 519 SUPERFAMILY SSF56801 5 516 1.57E-168 T 12-10-2018 N288_07035 b26a5afeffb101f48f5006575761ba76 519 PRINTS PR00154 AMP-binding signature 184 192 7.4E-5 T 12-10-2018 IPR020459 AMP-binding N288_07035 b26a5afeffb101f48f5006575761ba76 519 PRINTS PR00154 AMP-binding signature 172 183 7.4E-5 T 12-10-2018 IPR020459 AMP-binding N288_07035 b26a5afeffb101f48f5006575761ba76 519 ProSitePatterns PS00455 Putative AMP-binding domain signature. 177 188 - T 12-10-2018 IPR020845 AMP-binding, conserved site N288_07035 b26a5afeffb101f48f5006575761ba76 519 Pfam PF00501 AMP-binding enzyme 9 422 3.2E-119 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 N288_07035 b26a5afeffb101f48f5006575761ba76 519 Pfam PF13193 AMP-binding enzyme C-terminal domain 431 505 1.1E-22 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain N288_07035 b26a5afeffb101f48f5006575761ba76 519 Gene3D G3DSA:3.30.300.310 419 519 8.5E-36 T 12-10-2018 N288_08655 f32a3c0bbeb6b604b589f80afca06888 219 Pfam PF13158 Protein of unknown function (DUF3993) 6 126 6.6E-53 T 12-10-2018 IPR025056 Protein of unknown function DUF3993 N288_07870 29cdbcef136416fd834db8a0ea1cf890 761 Pfam PF06054 Competence protein CoiA-like family 9 64 8.8E-6 T 12-10-2018 IPR010330 Competence-induced protein CoiA-like N288_07870 29cdbcef136416fd834db8a0ea1cf890 761 Gene3D G3DSA:3.40.50.300 413 756 7.6E-73 T 12-10-2018 N288_07870 29cdbcef136416fd834db8a0ea1cf890 761 Gene3D G3DSA:1.10.486.10 515 668 7.6E-73 T 12-10-2018 N288_07870 29cdbcef136416fd834db8a0ea1cf890 761 SUPERFAMILY SSF52540 136 756 7.6E-126 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_07870 29cdbcef136416fd834db8a0ea1cf890 761 Pfam PF13361 UvrD-like helicase C-terminal domain 409 741 1.8E-41 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 N288_07870 29cdbcef136416fd834db8a0ea1cf890 761 Gene3D G3DSA:1.10.10.160 247 322 1.3E-84 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily N288_07870 29cdbcef136416fd834db8a0ea1cf890 761 Pfam PF00580 UvrD/REP helicase N-terminal domain 142 404 3.0E-62 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 N288_07870 29cdbcef136416fd834db8a0ea1cf890 761 Gene3D G3DSA:3.40.50.300 141 405 1.3E-84 T 12-10-2018 N288_19270 e282ce33d3158fef67c098df109b75f0 369 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 243 262 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 N288_19270 e282ce33d3158fef67c098df109b75f0 369 Gene3D G3DSA:3.40.718.10 2 369 8.0E-154 T 12-10-2018 N288_19270 e282ce33d3158fef67c098df109b75f0 369 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 351 3.8E-139 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 N288_19270 e282ce33d3158fef67c098df109b75f0 369 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 355 50.263 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 N288_19270 e282ce33d3158fef67c098df109b75f0 369 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 351 2.8E-162 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 N288_19270 e282ce33d3158fef67c098df109b75f0 369 SUPERFAMILY SSF53659 4 355 7.68E-122 T 12-10-2018 N288_19270 e282ce33d3158fef67c098df109b75f0 369 SMART SM01329 4 351 1.2E-203 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 N288_15495 a75eb7b1ada6df0394aa68c2c36a9a84 107 Gene3D G3DSA:1.10.1660.10 5 90 6.0E-22 T 12-10-2018 N288_15495 a75eb7b1ada6df0394aa68c2c36a9a84 107 SUPERFAMILY SSF46955 14 78 2.2E-17 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily N288_15495 a75eb7b1ada6df0394aa68c2c36a9a84 107 SMART SM00422 13 81 1.2E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_15495 a75eb7b1ada6df0394aa68c2c36a9a84 107 Pfam PF13411 MerR HTH family regulatory protein 14 75 3.3E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_02005 de703d7d3d40b0d87b62b68293cae786 360 Pfam PF11181 Heat induced stress protein YflT 8 108 7.4E-29 T 12-10-2018 IPR025889 General stress protein 17M-like domain N288_02005 de703d7d3d40b0d87b62b68293cae786 360 Pfam PF09557 Domain of unknown function (DUF2382) 212 324 6.0E-29 T 12-10-2018 IPR019060 Domain of unknown function DUF2382 N288_02005 de703d7d3d40b0d87b62b68293cae786 360 ProDom PD458455 UPF0355 MW0363 SE2351 MRSA252 SSP2326 SH2586 SA0372 SAV0387 SACOL0457 SERP0066 10 141 2.0E-4 T 12-10-2018 N288_02005 de703d7d3d40b0d87b62b68293cae786 360 TIGRFAM TIGR02271 TIGR02271: conserved domain 212 325 1.6E-33 T 12-10-2018 IPR019060 Domain of unknown function DUF2382 N288_20090 fa6805b3829835852d606a65413362b6 242 Pfam PF03476 MOSC N-terminal beta barrel domain 4 66 1.4E-10 T 12-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 N288_20090 fa6805b3829835852d606a65413362b6 242 Gene3D G3DSA:2.40.33.20 121 242 8.2E-7 T 12-10-2018 N288_20090 fa6805b3829835852d606a65413362b6 242 SUPERFAMILY SSF50800 4 238 1.78E-19 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily N288_20090 fa6805b3829835852d606a65413362b6 242 Pfam PF03473 MOSC domain 124 238 2.0E-16 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 N288_05655 5bdd44489b9332880a3d7d8d22a61919 365 Pfam PF14815 NUDIX domain 245 359 3.1E-25 T 12-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 N288_05655 5bdd44489b9332880a3d7d8d22a61919 365 SUPERFAMILY SSF48150 15 232 1.15E-76 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 N288_05655 5bdd44489b9332880a3d7d8d22a61919 365 Gene3D G3DSA:3.90.79.10 239 365 5.9E-32 T 12-10-2018 N288_05655 5bdd44489b9332880a3d7d8d22a61919 365 SMART SM00525 201 221 0.0014 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 N288_05655 5bdd44489b9332880a3d7d8d22a61919 365 Gene3D G3DSA:1.10.1670.10 20 223 2.4E-92 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 N288_05655 5bdd44489b9332880a3d7d8d22a61919 365 Pfam PF00633 Helix-hairpin-helix motif 110 138 2.8E-8 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 N288_05655 5bdd44489b9332880a3d7d8d22a61919 365 SMART SM00478 49 200 1.3E-54 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 N288_05655 5bdd44489b9332880a3d7d8d22a61919 365 SUPERFAMILY SSF55811 230 363 3.66E-26 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_05655 5bdd44489b9332880a3d7d8d22a61919 365 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 17 280 9.1E-113 T 12-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 N288_05655 5bdd44489b9332880a3d7d8d22a61919 365 Gene3D G3DSA:1.10.340.30 31 142 2.4E-92 T 12-10-2018 N288_05655 5bdd44489b9332880a3d7d8d22a61919 365 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 45 179 1.3E-20 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 N288_02185 8fda8a89fcdeb8b5e81b53ad3b3813c3 316 SUPERFAMILY SSF161098 77 306 3.4E-64 T 12-10-2018 IPR035906 MetI-like superfamily N288_02185 8fda8a89fcdeb8b5e81b53ad3b3813c3 316 Gene3D G3DSA:1.10.3720.10 72 314 3.5E-71 T 12-10-2018 IPR035906 MetI-like superfamily N288_02185 8fda8a89fcdeb8b5e81b53ad3b3813c3 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 306 8.3E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_06210 60f4c19a2d0c0a1cde854a7295538fa3 145 Gene3D G3DSA:1.20.1550.10 5 116 1.0E-12 T 12-10-2018 IPR023380 DsbB-like superfamily N288_06210 60f4c19a2d0c0a1cde854a7295538fa3 145 SUPERFAMILY SSF158442 13 138 2.09E-29 T 12-10-2018 IPR023380 DsbB-like superfamily N288_06210 60f4c19a2d0c0a1cde854a7295538fa3 145 Hamap MF_00287 Probable disulfide formation protein [bdbC]. 6 142 22.841 T 12-10-2018 IPR012187 Disulphide bond formation protein BdbC N288_06210 60f4c19a2d0c0a1cde854a7295538fa3 145 Pfam PF02600 Disulfide bond formation protein DsbB 11 114 4.7E-14 T 12-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 N288_06210 60f4c19a2d0c0a1cde854a7295538fa3 145 PIRSF PIRSF036659 3 144 2.4E-55 T 12-10-2018 IPR012187 Disulphide bond formation protein BdbC N288_02560 7983b69345a4c6a8dde06d8a56848ab5 191 SUPERFAMILY SSF140478 29 176 2.09E-54 T 12-10-2018 IPR023353 LemA-like domain superfamily N288_02560 7983b69345a4c6a8dde06d8a56848ab5 191 Gene3D G3DSA:1.20.1440.20 19 187 7.8E-71 T 12-10-2018 IPR023353 LemA-like domain superfamily N288_02560 7983b69345a4c6a8dde06d8a56848ab5 191 Pfam PF04011 LemA family 12 187 1.9E-70 T 12-10-2018 IPR007156 LemA N288_06550 749e379f18ae565328bff60ac1eea10f 295 Gene3D G3DSA:3.30.230.10 176 293 7.0E-18 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup N288_06550 749e379f18ae565328bff60ac1eea10f 295 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 195 286 5.5E-12 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 N288_06550 749e379f18ae565328bff60ac1eea10f 295 SUPERFAMILY SSF54211 190 288 2.77E-15 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_00835 f2db494e4c18c363a6599772eed3a09e 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 12-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00835 f2db494e4c18c363a6599772eed3a09e 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 2.6E-55 T 12-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00835 f2db494e4c18c363a6599772eed3a09e 146 SUPERFAMILY SSF52080 4 143 2.62E-50 T 12-10-2018 IPR036227 Ribosomal L18e/L15P superfamily N288_00835 f2db494e4c18c363a6599772eed3a09e 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 4.6E-38 T 12-10-2018 IPR021131 Ribosomal protein L18e/L15P N288_00835 f2db494e4c18c363a6599772eed3a09e 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 22.773 T 12-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 N288_00835 f2db494e4c18c363a6599772eed3a09e 146 Gene3D G3DSA:3.100.10.10 66 146 1.5E-27 T 12-10-2018 N288_17525 3003a67e076aff0152748ad3fd6f1215 222 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 9 212 3.2E-98 T 12-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 N288_17525 3003a67e076aff0152748ad3fd6f1215 222 Pfam PF01144 Coenzyme A transferase 10 205 5.8E-44 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 N288_17525 3003a67e076aff0152748ad3fd6f1215 222 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 48 56 - T 12-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 N288_17525 3003a67e076aff0152748ad3fd6f1215 222 SUPERFAMILY SSF100950 8 216 3.14E-73 T 12-10-2018 IPR037171 NagB/RpiA transferase-like N288_17525 3003a67e076aff0152748ad3fd6f1215 222 Gene3D G3DSA:3.40.1080.10 5 217 1.2E-102 T 12-10-2018 N288_17525 3003a67e076aff0152748ad3fd6f1215 222 SMART SM00882 10 206 6.2E-79 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 N288_10275 b4fe44f7c686f4a6ad5f265cba9c8c8a 134 ProSitePatterns PS00552 MerR-type HTH domain signature. 16 38 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_10275 b4fe44f7c686f4a6ad5f265cba9c8c8a 134 SMART SM00422 13 81 2.0E-26 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_10275 b4fe44f7c686f4a6ad5f265cba9c8c8a 134 SUPERFAMILY SSF46955 13 102 1.74E-19 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily N288_10275 b4fe44f7c686f4a6ad5f265cba9c8c8a 134 Gene3D G3DSA:1.10.1660.10 3 84 5.7E-25 T 12-10-2018 N288_10275 b4fe44f7c686f4a6ad5f265cba9c8c8a 134 Pfam PF13411 MerR HTH family regulatory protein 14 79 2.5E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_09800 241ba221558e1ab875f84e5fe6708282 381 SMART SM00962 186 376 9.1E-62 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 N288_09800 241ba221558e1ab875f84e5fe6708282 381 Gene3D G3DSA:1.20.120.1380 130 367 1.2E-80 T 12-10-2018 N288_09800 241ba221558e1ab875f84e5fe6708282 381 SMART SM00382 185 345 4.4E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_09800 241ba221558e1ab875f84e5fe6708282 381 SUPERFAMILY SSF52540 186 376 8.82E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_09800 241ba221558e1ab875f84e5fe6708282 381 Gene3D G3DSA:3.40.50.300 181 364 1.2E-80 T 12-10-2018 N288_09800 241ba221558e1ab875f84e5fe6708282 381 Pfam PF00448 SRP54-type protein, GTPase domain 187 375 1.8E-42 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 N288_09800 241ba221558e1ab875f84e5fe6708282 381 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 273 7.1E-72 T 12-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 N288_23860 adb09942ac822d63b7faad9214e19b41 70 Gene3D G3DSA:2.30.170.50 1 69 1.9E-32 T 12-10-2018 N288_23860 adb09942ac822d63b7faad9214e19b41 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 29.747 T 12-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_23860 adb09942ac822d63b7faad9214e19b41 70 SUPERFAMILY SSF143800 1 65 1.73E-26 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_23860 adb09942ac822d63b7faad9214e19b41 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_23860 adb09942ac822d63b7faad9214e19b41 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 2.4E-31 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_23860 adb09942ac822d63b7faad9214e19b41 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.1E-22 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_23860 adb09942ac822d63b7faad9214e19b41 70 PRINTS PR01249 Ribosomal protein L31 signature 30 45 1.1E-22 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_23860 adb09942ac822d63b7faad9214e19b41 70 PRINTS PR01249 Ribosomal protein L31 signature 45 63 1.1E-22 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_23860 adb09942ac822d63b7faad9214e19b41 70 Pfam PF01197 Ribosomal protein L31 1 64 3.1E-32 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_10180 1576cbaec53965236c6d4690c052e5ed 142 SUPERFAMILY SSF158622 4 123 2.35E-35 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily N288_10180 1576cbaec53965236c6d4690c052e5ed 142 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 9 113 1.3E-23 T 12-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA N288_10180 1576cbaec53965236c6d4690c052e5ed 142 PIRSF PIRSF021287 1 123 1.9E-49 T 12-10-2018 IPR016783 Biofilm formation YmcA N288_10180 1576cbaec53965236c6d4690c052e5ed 142 Gene3D G3DSA:1.20.1500.10 2 124 1.0E-36 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily N288_07775 05e8a7e8747f7ae818f1e23ec938f8c8 161 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 48 128 3.1E-9 T 12-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like N288_21295 fc1bcdc21d63b06f70702c41adcdecd4 267 Pfam PF13115 YtkA-like 167 248 2.9E-11 T 12-10-2018 IPR032693 YtkA-like domain N288_21295 fc1bcdc21d63b06f70702c41adcdecd4 267 Pfam PF13115 YtkA-like 35 115 8.4E-17 T 12-10-2018 IPR032693 YtkA-like domain N288_21295 fc1bcdc21d63b06f70702c41adcdecd4 267 Gene3D G3DSA:2.60.40.10 172 257 5.2E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_21245 274ae83221831f10eeb0ae0fcb3abcc4 244 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 215 235 3.3E-6 T 12-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 N288_21245 274ae83221831f10eeb0ae0fcb3abcc4 244 Pfam PF06276 Ferric iron reductase FhuF-like transporter 58 211 1.5E-18 T 12-10-2018 IPR022770 Ferric iron reductase FhuF domain N288_21045 6de3624d7a608aaac2581da455034c7f 91 Gene3D G3DSA:3.50.4.20 1 91 6.4E-42 T 12-10-2018 IPR038141 YutD-like superfamily N288_21045 6de3624d7a608aaac2581da455034c7f 91 PIRSF PIRSF012565 1 91 7.2E-47 T 12-10-2018 IPR009370 Protein of unknown function DUF1027 N288_21045 6de3624d7a608aaac2581da455034c7f 91 Pfam PF06265 Protein of unknown function (DUF1027) 4 87 2.7E-38 T 12-10-2018 IPR009370 Protein of unknown function DUF1027 N288_17415 9a885e93fde85b5b544c76fcf3b3f689 139 ProDom PD086170 SPORULATION AB V STAGE MEMBRANE SPOVAB TRANSMEMBRANE 27 138 2.0E-32 T 12-10-2018 IPR020144 Stage V sporulation protein AB N288_17415 9a885e93fde85b5b544c76fcf3b3f689 139 Pfam PF13782 Stage V sporulation protein AB 27 135 3.1E-34 T 12-10-2018 IPR020144 Stage V sporulation protein AB N288_03855 abacee03d226d032b365c2fd50445005 190 Gene3D G3DSA:3.90.79.10 1 188 1.7E-35 T 12-10-2018 N288_03855 abacee03d226d032b365c2fd50445005 190 Pfam PF00293 NUDIX domain 47 153 8.5E-13 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_03855 abacee03d226d032b365c2fd50445005 190 SUPERFAMILY SSF55811 3 174 3.38E-32 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_03855 abacee03d226d032b365c2fd50445005 190 ProSitePatterns PS00893 Nudix box signature. 76 97 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_16030 73b85ad88677d4e14ac7e6f4ebb07fac 162 SUPERFAMILY SSF49764 74 156 1.74E-7 T 12-10-2018 IPR008978 HSP20-like chaperone N288_22145 865e49517a158eddcc0608b8c538ce9c 412 Gene3D G3DSA:2.40.50.100 62 224 4.0E-28 T 12-10-2018 N288_22145 865e49517a158eddcc0608b8c538ce9c 412 Gene3D G3DSA:2.40.420.20 46 363 4.0E-28 T 12-10-2018 N288_22145 865e49517a158eddcc0608b8c538ce9c 412 Gene3D G3DSA:1.10.287.470 97 187 4.0E-28 T 12-10-2018 N288_22145 865e49517a158eddcc0608b8c538ce9c 412 Pfam PF13437 HlyD family secretion protein 216 297 1.4E-4 T 12-10-2018 N288_22145 865e49517a158eddcc0608b8c538ce9c 412 Gene3D G3DSA:2.40.30.170 51 307 4.0E-28 T 12-10-2018 N288_14165 eb2b9ce597819f59084b2c3ac0ab244a 338 Gene3D G3DSA:3.40.50.2300 61 154 6.2E-10 T 12-10-2018 N288_14165 eb2b9ce597819f59084b2c3ac0ab244a 338 SUPERFAMILY SSF47413 3 61 4.13E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_14165 eb2b9ce597819f59084b2c3ac0ab244a 338 SMART SM00354 2 72 6.5E-26 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_14165 eb2b9ce597819f59084b2c3ac0ab244a 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 4.9E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_14165 eb2b9ce597819f59084b2c3ac0ab244a 338 SUPERFAMILY SSF53822 71 335 3.34E-61 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_14165 eb2b9ce597819f59084b2c3ac0ab244a 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 4.8E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_14165 eb2b9ce597819f59084b2c3ac0ab244a 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 4.8E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_14165 eb2b9ce597819f59084b2c3ac0ab244a 338 Pfam PF13377 Periplasmic binding protein-like domain 174 334 1.3E-37 T 12-10-2018 N288_14165 eb2b9ce597819f59084b2c3ac0ab244a 338 Gene3D G3DSA:3.40.50.2300 160 336 6.0E-51 T 12-10-2018 N288_14165 eb2b9ce597819f59084b2c3ac0ab244a 338 Gene3D G3DSA:1.10.260.40 2 60 6.3E-21 T 12-10-2018 N288_07780 4c630937740859c2c1782148aefc832f 155 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 28 145 2.4E-39 T 12-10-2018 IPR005562 SpoVA N288_07780 4c630937740859c2c1782148aefc832f 155 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 10 149 2.1E-62 T 12-10-2018 IPR014203 Sporulation stage V, protein AC N288_02100 d57934ce4ae1f8e231df06bb9db1e806 189 Gene3D G3DSA:3.40.10.10 2 75 1.3E-30 T 12-10-2018 IPR035451 Ada-like domain superfamily N288_02100 d57934ce4ae1f8e231df06bb9db1e806 189 Pfam PF02805 Metal binding domain of Ada 10 74 3.6E-30 T 12-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 N288_02100 d57934ce4ae1f8e231df06bb9db1e806 189 SUPERFAMILY SSF46689 83 131 3.19E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_02100 d57934ce4ae1f8e231df06bb9db1e806 189 SMART SM00342 98 181 2.5E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_02100 d57934ce4ae1f8e231df06bb9db1e806 189 Gene3D G3DSA:1.10.10.60 82 131 4.6E-15 T 12-10-2018 N288_02100 d57934ce4ae1f8e231df06bb9db1e806 189 Gene3D G3DSA:1.10.10.60 132 186 1.6E-17 T 12-10-2018 N288_02100 d57934ce4ae1f8e231df06bb9db1e806 189 SUPERFAMILY SSF46689 134 184 2.2E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_02100 d57934ce4ae1f8e231df06bb9db1e806 189 SUPERFAMILY SSF57884 6 89 2.48E-31 T 12-10-2018 IPR035451 Ada-like domain superfamily N288_02100 d57934ce4ae1f8e231df06bb9db1e806 189 PIRSF PIRSF000408 4 189 9.0E-57 T 12-10-2018 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA N288_02100 d57934ce4ae1f8e231df06bb9db1e806 189 Pfam PF12833 Helix-turn-helix domain 104 183 8.5E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_18855 68a87bd957b78f31e4df5089869139d9 301 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 14 296 2.7E-75 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 N288_18855 68a87bd957b78f31e4df5089869139d9 301 Gene3D G3DSA:1.20.1510.10 12 214 7.5E-63 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily N288_18855 68a87bd957b78f31e4df5089869139d9 301 Pfam PF16916 Dimerisation domain of Zinc Transporter 219 295 1.4E-19 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain N288_18855 68a87bd957b78f31e4df5089869139d9 301 Pfam PF01545 Cation efflux family 16 211 4.9E-48 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 N288_18855 68a87bd957b78f31e4df5089869139d9 301 Gene3D G3DSA:3.30.70.1350 217 296 6.9E-16 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 N288_18855 68a87bd957b78f31e4df5089869139d9 301 SUPERFAMILY SSF160240 219 296 9.29E-20 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 N288_18855 68a87bd957b78f31e4df5089869139d9 301 SUPERFAMILY SSF161111 8 215 1.31E-54 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily N288_09555 3ef6853d1e314b7351f2adb8b755b44d 588 Pfam PF07584 Aerotolerance regulator N-terminal 1 78 4.4E-14 T 12-10-2018 IPR024163 Aerotolerance regulator, N-terminal N288_09555 3ef6853d1e314b7351f2adb8b755b44d 588 SUPERFAMILY SSF53300 87 199 1.65E-8 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_09555 3ef6853d1e314b7351f2adb8b755b44d 588 Gene3D G3DSA:3.40.50.410 85 245 2.3E-10 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_09555 3ef6853d1e314b7351f2adb8b755b44d 588 Pfam PF13519 von Willebrand factor type A domain 90 191 1.4E-14 T 12-10-2018 IPR002035 von Willebrand factor, type A N288_22610 03bdbc10fe5df62f2c2ead592ebfb72b 475 Gene3D G3DSA:1.10.10.10 5 75 1.9E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_22610 03bdbc10fe5df62f2c2ead592ebfb72b 475 Pfam PF01547 Bacterial extracellular solute-binding protein 97 385 4.8E-28 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein N288_22610 03bdbc10fe5df62f2c2ead592ebfb72b 475 SUPERFAMILY SSF46785 11 78 4.7E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_22610 03bdbc10fe5df62f2c2ead592ebfb72b 475 SUPERFAMILY SSF53850 81 470 8.15E-54 T 12-10-2018 N288_22610 03bdbc10fe5df62f2c2ead592ebfb72b 475 Gene3D G3DSA:3.40.190.10 77 471 1.3E-71 T 12-10-2018 N288_22610 03bdbc10fe5df62f2c2ead592ebfb72b 475 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 74 7.7E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_22610 03bdbc10fe5df62f2c2ead592ebfb72b 475 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.3E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_22610 03bdbc10fe5df62f2c2ead592ebfb72b 475 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.3E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_22610 03bdbc10fe5df62f2c2ead592ebfb72b 475 SMART SM00345 15 74 2.8E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_09120 d196b811afc85ee059b74e74c5616c1f 513 SUPERFAMILY SSF52096 5 249 8.4E-66 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_09120 d196b811afc85ee059b74e74c5616c1f 513 SUPERFAMILY SSF52096 266 512 7.83E-83 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_09120 d196b811afc85ee059b74e74c5616c1f 513 Gene3D G3DSA:3.90.226.10 1 247 1.7E-76 T 12-10-2018 N288_09120 d196b811afc85ee059b74e74c5616c1f 513 Pfam PF01039 Carboxyl transferase domain 32 510 6.4E-156 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 N288_09120 d196b811afc85ee059b74e74c5616c1f 513 Gene3D G3DSA:3.90.226.10 255 511 6.7E-86 T 12-10-2018 N288_21440 83662df5b91cd57483b26e17ae08cada 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 12-10-2018 IPR001455 TusA-like domain N288_21440 83662df5b91cd57483b26e17ae08cada 75 Gene3D G3DSA:3.30.110.40 1 75 2.4E-32 T 12-10-2018 IPR036868 TusA-like domain superfamily N288_21440 83662df5b91cd57483b26e17ae08cada 75 SUPERFAMILY SSF64307 4 75 5.49E-26 T 12-10-2018 IPR036868 TusA-like domain superfamily N288_21440 83662df5b91cd57483b26e17ae08cada 75 Pfam PF01206 Sulfurtransferase TusA 5 74 7.7E-26 T 12-10-2018 IPR001455 TusA-like domain N288_09670 24d4c0bf3421056e53232a2d4c2ef0ad 468 SMART SM00382 52 357 1.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_09670 24d4c0bf3421056e53232a2d4c2ef0ad 468 Gene3D G3DSA:1.10.8.60 360 465 2.1E-40 T 12-10-2018 N288_09670 24d4c0bf3421056e53232a2d4c2ef0ad 468 SUPERFAMILY SSF52540 7 466 8.99E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_09670 24d4c0bf3421056e53232a2d4c2ef0ad 468 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 56 138 2.2E-6 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 N288_09670 24d4c0bf3421056e53232a2d4c2ef0ad 468 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 360 431 4.2E-8 T 12-10-2018 IPR019489 Clp ATPase, C-terminal N288_09670 24d4c0bf3421056e53232a2d4c2ef0ad 468 SMART SM01086 360 454 7.4E-26 T 12-10-2018 IPR019489 Clp ATPase, C-terminal N288_09670 24d4c0bf3421056e53232a2d4c2ef0ad 468 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 4 468 44.428 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 N288_09670 24d4c0bf3421056e53232a2d4c2ef0ad 468 Pfam PF07724 AAA domain (Cdc48 subfamily) 214 354 1.0E-40 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 N288_09670 24d4c0bf3421056e53232a2d4c2ef0ad 468 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 7 468 1.2E-217 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 N288_24135 9bb04838f1798123b046e64a191271ee 459 Gene3D G3DSA:3.30.565.10 323 448 2.6E-12 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_24135 9bb04838f1798123b046e64a191271ee 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 313 3.0E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_24135 9bb04838f1798123b046e64a191271ee 459 Pfam PF00672 HAMP domain 190 237 4.2E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_24135 9bb04838f1798123b046e64a191271ee 459 SMART SM00388 249 314 1.2E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_24135 9bb04838f1798123b046e64a191271ee 459 SMART SM00304 189 241 1.3E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_24135 9bb04838f1798123b046e64a191271ee 459 Gene3D G3DSA:1.10.287.130 245 309 6.3E-15 T 12-10-2018 N288_24135 9bb04838f1798123b046e64a191271ee 459 SUPERFAMILY SSF158472 190 237 1.11E-7 T 12-10-2018 N288_24135 9bb04838f1798123b046e64a191271ee 459 SUPERFAMILY SSF47384 233 315 1.94E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_24135 9bb04838f1798123b046e64a191271ee 459 SUPERFAMILY SSF55874 304 439 3.14E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_24135 9bb04838f1798123b046e64a191271ee 459 Gene3D G3DSA:1.20.1480.50 151 244 7.0E-10 T 12-10-2018 N288_24135 9bb04838f1798123b046e64a191271ee 459 SMART SM00387 360 452 1.7E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_24535 d4b5b197abdd6d0adf2808acc9319916 83 Gene3D G3DSA:3.40.20.10 1 81 2.5E-5 T 12-10-2018 IPR029006 ADF-H/Gelsolin-like domain superfamily N288_21125 6cf52959d558b63cdd889fda19101263 436 SUPERFAMILY SSF101960 12 435 1.06E-118 T 12-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily N288_21125 6cf52959d558b63cdd889fda19101263 436 Pfam PF01458 Uncharacterized protein family (UPF0051) 185 410 1.1E-64 T 12-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 N288_21125 6cf52959d558b63cdd889fda19101263 436 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 152 427 1.4E-75 T 12-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 N288_18585 3957c6eea10be767b2e4a0814d146ae0 279 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 113 191 1.6E-13 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase N288_18585 3957c6eea10be767b2e4a0814d146ae0 279 Gene3D G3DSA:3.40.50.10860 5 260 1.3E-94 T 12-10-2018 N288_18585 3957c6eea10be767b2e4a0814d146ae0 279 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 272 35.448 T 12-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 N288_18585 3957c6eea10be767b2e4a0814d146ae0 279 SUPERFAMILY SSF51735 102 270 1.1E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_18585 3957c6eea10be767b2e4a0814d146ae0 279 Gene3D G3DSA:3.40.50.720 101 240 1.3E-94 T 12-10-2018 N288_18585 3957c6eea10be767b2e4a0814d146ae0 279 SUPERFAMILY SSF53223 3 101 1.09E-35 T 12-10-2018 N288_18585 3957c6eea10be767b2e4a0814d146ae0 279 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 274 3.0E-86 T 12-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 N288_18585 3957c6eea10be767b2e4a0814d146ae0 279 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 9.5E-30 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 N288_05040 97ee57e1db80201c8a821503446d3839 235 Gene3D G3DSA:3.30.2010.10 137 228 5.0E-17 T 12-10-2018 N288_05040 97ee57e1db80201c8a821503446d3839 235 Pfam PF01863 Protein of unknown function DUF45 21 227 6.8E-59 T 12-10-2018 IPR002725 Protein of unknown function DUF45 N288_04715 3754cabc1180a56bce139613e7dedf3a 198 Pfam PF12822 ECF transporter, substrate-specific component 6 179 5.9E-22 T 12-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 N288_04715 3754cabc1180a56bce139613e7dedf3a 198 PIRSF PIRSF037778 1 196 2.0E-28 T 12-10-2018 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 N288_04715 3754cabc1180a56bce139613e7dedf3a 198 Gene3D G3DSA:1.10.1760.20 1 194 2.7E-40 T 12-10-2018 N288_22525 31be5a43dcf0b15ab67c71b4874cb378 66 Pfam PF01381 Helix-turn-helix 9 57 1.1E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_22525 31be5a43dcf0b15ab67c71b4874cb378 66 SMART SM00530 5 60 4.5E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_22525 31be5a43dcf0b15ab67c71b4874cb378 66 SUPERFAMILY SSF47413 2 63 2.41E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_22525 31be5a43dcf0b15ab67c71b4874cb378 66 Gene3D G3DSA:1.10.260.40 1 66 8.7E-29 T 12-10-2018 N288_17590 4dc64c8a5151be6d219a388a804c4128 321 Gene3D G3DSA:3.60.15.10 3 260 8.5E-49 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_17590 4dc64c8a5151be6d219a388a804c4128 321 Pfam PF00753 Metallo-beta-lactamase superfamily 19 234 3.1E-21 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_17590 4dc64c8a5151be6d219a388a804c4128 321 SMART SM00849 21 234 1.2E-24 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_17590 4dc64c8a5151be6d219a388a804c4128 321 SUPERFAMILY SSF56281 13 318 4.59E-45 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_11990 d7a029e404e04746fd2cc10af6fe6268 466 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 247 258 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 N288_11990 d7a029e404e04746fd2cc10af6fe6268 466 Gene3D G3DSA:3.40.309.10 223 418 4.2E-170 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 N288_11990 d7a029e404e04746fd2cc10af6fe6268 466 PIRSF PIRSF036492 2 466 2.9E-180 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 N288_11990 d7a029e404e04746fd2cc10af6fe6268 466 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 219 226 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 N288_11990 d7a029e404e04746fd2cc10af6fe6268 466 Pfam PF00171 Aldehyde dehydrogenase family 6 438 3.8E-86 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 N288_11990 d7a029e404e04746fd2cc10af6fe6268 466 Gene3D G3DSA:3.40.605.10 23 438 4.2E-170 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 N288_11990 d7a029e404e04746fd2cc10af6fe6268 466 SUPERFAMILY SSF53720 6 440 4.06E-120 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 N288_01760 58efd2c79a8b6d3aed8893f5892049c6 390 Gene3D G3DSA:3.10.570.10 54 390 1.5E-139 T 12-10-2018 N288_01760 58efd2c79a8b6d3aed8893f5892049c6 390 PIRSF PIRSF012509 1 389 2.8E-153 T 12-10-2018 IPR011426 CamS sex pheromone cAM373 N288_01760 58efd2c79a8b6d3aed8893f5892049c6 390 Pfam PF07537 CamS sex pheromone cAM373 precursor 57 381 4.7E-131 T 12-10-2018 IPR011426 CamS sex pheromone cAM373 N288_09095 6ac5bb509ca0d7ba7ec53e8e4355e503 251 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 N288_09095 6ac5bb509ca0d7ba7ec53e8e4355e503 251 SUPERFAMILY SSF52096 4 250 1.26E-50 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_09095 6ac5bb509ca0d7ba7ec53e8e4355e503 251 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 215 3.3E-30 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 N288_09095 6ac5bb509ca0d7ba7ec53e8e4355e503 251 Gene3D G3DSA:3.90.226.10 3 251 3.7E-52 T 12-10-2018 N288_18955 a1aa04c0c550ccc9436e8097dd24921c 528 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 4 494 3.2E-151 T 12-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 N288_18955 a1aa04c0c550ccc9436e8097dd24921c 528 Pfam PF02910 Fumarate reductase flavoprotein C-term 416 514 7.5E-14 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 N288_18955 a1aa04c0c550ccc9436e8097dd24921c 528 Gene3D G3DSA:1.20.58.100 410 510 1.5E-15 T 12-10-2018 N288_18955 a1aa04c0c550ccc9436e8097dd24921c 528 SUPERFAMILY SSF51905 4 388 1.97E-60 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_18955 a1aa04c0c550ccc9436e8097dd24921c 528 Pfam PF00890 FAD binding domain 6 371 1.2E-81 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 N288_18955 a1aa04c0c550ccc9436e8097dd24921c 528 Gene3D G3DSA:3.50.50.60 6 381 1.3E-133 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_18955 a1aa04c0c550ccc9436e8097dd24921c 528 SUPERFAMILY SSF46977 413 512 4.58E-24 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 N288_18955 a1aa04c0c550ccc9436e8097dd24921c 528 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 334 356 1.7E-5 T 12-10-2018 N288_18955 a1aa04c0c550ccc9436e8097dd24921c 528 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.7E-5 T 12-10-2018 N288_18955 a1aa04c0c550ccc9436e8097dd24921c 528 Gene3D G3DSA:3.90.700.10 231 326 1.3E-133 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 N288_18955 a1aa04c0c550ccc9436e8097dd24921c 528 SUPERFAMILY SSF56425 221 331 2.39E-28 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 N288_03915 8c20dfbc3d9c3a7ed03573fcfebe0d65 286 SUPERFAMILY SSF48150 106 284 1.74E-37 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 N288_03915 8c20dfbc3d9c3a7ed03573fcfebe0d65 286 SMART SM00478 126 286 3.4E-18 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 N288_03915 8c20dfbc3d9c3a7ed03573fcfebe0d65 286 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 123 270 4.2E-18 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 N288_03915 8c20dfbc3d9c3a7ed03573fcfebe0d65 286 Gene3D G3DSA:1.10.340.30 114 233 1.4E-49 T 12-10-2018 N288_03915 8c20dfbc3d9c3a7ed03573fcfebe0d65 286 Gene3D G3DSA:1.10.1670.40 234 283 1.4E-49 T 12-10-2018 N288_19295 6a9ff1c88a49abce1ff6aefa9173bb7e 301 SUPERFAMILY SSF56752 4 283 1.7E-89 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 N288_19295 6a9ff1c88a49abce1ff6aefa9173bb7e 301 ProSitePatterns PS00770 Aminotransferases class-IV signature. 185 214 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 N288_19295 6a9ff1c88a49abce1ff6aefa9173bb7e 301 Gene3D G3DSA:3.30.470.10 1 125 1.4E-46 T 12-10-2018 N288_19295 6a9ff1c88a49abce1ff6aefa9173bb7e 301 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 7 286 9.5E-99 T 12-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 N288_19295 6a9ff1c88a49abce1ff6aefa9173bb7e 301 Gene3D G3DSA:3.20.10.10 126 299 1.2E-53 T 12-10-2018 N288_19295 6a9ff1c88a49abce1ff6aefa9173bb7e 301 Pfam PF01063 Amino-transferase class IV 32 258 1.8E-57 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 N288_11305 2d8d5480805e2bae6b3413f197233d60 503 ProSitePatterns PS01303 BCCT family of transporters signature. 310 319 - T 12-10-2018 IPR018093 BCCT transporter, conserved site N288_11305 2d8d5480805e2bae6b3413f197233d60 503 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 45 488 4.2E-167 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 N288_11305 2d8d5480805e2bae6b3413f197233d60 503 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 7 489 2.4E-194 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 N288_16685 faf4564b8c0b93c91e07fe709816303f 198 SUPERFAMILY SSF53271 1 188 6.13E-42 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like N288_16685 faf4564b8c0b93c91e07fe709816303f 198 Gene3D G3DSA:3.40.50.2020 3 188 4.3E-50 T 12-10-2018 N288_16685 faf4564b8c0b93c91e07fe709816303f 198 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 190 3.4E-83 T 12-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 N288_16685 faf4564b8c0b93c91e07fe709816303f 198 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 41.741 T 12-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 N288_15885 d9fa0d9cc1ccae9960a506a8a61b20fe 317 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 40 155 9.0E-41 T 12-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 N288_15885 d9fa0d9cc1ccae9960a506a8a61b20fe 317 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 286 304 1.9E-49 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 N288_15885 d9fa0d9cc1ccae9960a506a8a61b20fe 317 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 144 165 1.9E-49 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 N288_15885 d9fa0d9cc1ccae9960a506a8a61b20fe 317 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 136 1.9E-49 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 N288_15885 d9fa0d9cc1ccae9960a506a8a61b20fe 317 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 68 90 1.9E-49 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 N288_15885 d9fa0d9cc1ccae9960a506a8a61b20fe 317 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 189 209 1.9E-49 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 N288_15885 d9fa0d9cc1ccae9960a506a8a61b20fe 317 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 269 285 1.9E-49 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 N288_15885 d9fa0d9cc1ccae9960a506a8a61b20fe 317 SUPERFAMILY SSF53223 39 156 3.74E-38 T 12-10-2018 N288_15885 d9fa0d9cc1ccae9960a506a8a61b20fe 317 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 163 311 1.1E-56 T 12-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 N288_15885 d9fa0d9cc1ccae9960a506a8a61b20fe 317 Gene3D G3DSA:3.40.50.720 41 289 2.2E-101 T 12-10-2018 N288_15885 d9fa0d9cc1ccae9960a506a8a61b20fe 317 Gene3D G3DSA:3.40.50.10860 43 307 2.2E-101 T 12-10-2018 N288_15885 d9fa0d9cc1ccae9960a506a8a61b20fe 317 SUPERFAMILY SSF51735 165 310 1.39E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_15885 d9fa0d9cc1ccae9960a506a8a61b20fe 317 Hamap MF_01576 Bifunctional protein FolD [folD]. 38 313 35.07 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 N288_17145 7e8e0c7a6a3efa555391cc2c6d27cd32 219 Pfam PF12945 Flagellar protein YcgR 3 89 3.7E-20 T 12-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal N288_17145 7e8e0c7a6a3efa555391cc2c6d27cd32 219 SUPERFAMILY SSF141371 98 178 1.14E-6 T 12-10-2018 N288_17145 7e8e0c7a6a3efa555391cc2c6d27cd32 219 Gene3D G3DSA:2.40.10.220 96 211 4.0E-7 T 12-10-2018 N288_17145 7e8e0c7a6a3efa555391cc2c6d27cd32 219 SUPERFAMILY SSF141371 1 95 2.28E-5 T 12-10-2018 N288_17145 7e8e0c7a6a3efa555391cc2c6d27cd32 219 Pfam PF07238 PilZ domain 98 206 9.3E-12 T 12-10-2018 IPR009875 PilZ domain GO:0035438 N288_23950 4dd848722b10176657c9d41bd6c723fd 395 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 5.8E-140 T 12-10-2018 IPR002155 Thiolase GO:0016747 N288_23950 4dd848722b10176657c9d41bd6c723fd 395 Gene3D G3DSA:3.40.47.10 126 390 2.2E-142 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_23950 4dd848722b10176657c9d41bd6c723fd 395 Gene3D G3DSA:3.40.47.10 5 276 2.2E-142 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_23950 4dd848722b10176657c9d41bd6c723fd 395 SUPERFAMILY SSF53901 4 269 3.26E-82 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_23950 4dd848722b10176657c9d41bd6c723fd 395 Pfam PF02803 Thiolase, C-terminal domain 272 391 3.4E-43 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 N288_23950 4dd848722b10176657c9d41bd6c723fd 395 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 N288_23950 4dd848722b10176657c9d41bd6c723fd 395 PIRSF PIRSF000429 1 394 4.4E-119 T 12-10-2018 IPR002155 Thiolase GO:0016747 N288_23950 4dd848722b10176657c9d41bd6c723fd 395 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 N288_23950 4dd848722b10176657c9d41bd6c723fd 395 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 N288_23950 4dd848722b10176657c9d41bd6c723fd 395 Pfam PF00108 Thiolase, N-terminal domain 5 263 4.6E-97 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 N288_23950 4dd848722b10176657c9d41bd6c723fd 395 SUPERFAMILY SSF53901 272 392 3.49E-35 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_08410 ba5528adaab4d6efd028f5144441f51b 177 Pfam PF03079 ARD/ARD' family 6 168 1.5E-46 T 12-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 N288_08410 ba5528adaab4d6efd028f5144441f51b 177 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 175 29.0 T 12-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 N288_08410 ba5528adaab4d6efd028f5144441f51b 177 SUPERFAMILY SSF51182 14 173 4.33E-31 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily N288_08410 ba5528adaab4d6efd028f5144441f51b 177 Gene3D G3DSA:2.60.120.10 1 170 3.2E-57 T 12-10-2018 IPR014710 RmlC-like jelly roll fold N288_01665 f6d931483a1bf1d152df91670eef6e30 386 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 13 362 43.466 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 N288_01665 f6d931483a1bf1d152df91670eef6e30 386 Pfam PF02222 ATP-grasp domain 118 287 1.6E-60 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type N288_01665 f6d931483a1bf1d152df91670eef6e30 386 SUPERFAMILY SSF56059 109 307 2.47E-65 T 12-10-2018 N288_01665 f6d931483a1bf1d152df91670eef6e30 386 Gene3D G3DSA:3.30.470.20 188 377 5.2E-79 T 12-10-2018 N288_01665 f6d931483a1bf1d152df91670eef6e30 386 Gene3D G3DSA:3.40.50.20 1 113 8.0E-47 T 12-10-2018 N288_01665 f6d931483a1bf1d152df91670eef6e30 386 SUPERFAMILY SSF51246 311 374 1.49E-14 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 N288_01665 f6d931483a1bf1d152df91670eef6e30 386 Gene3D G3DSA:3.30.1490.20 114 187 2.1E-24 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 N288_01665 f6d931483a1bf1d152df91670eef6e30 386 SUPERFAMILY SSF52440 10 106 6.19E-26 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily N288_01665 f6d931483a1bf1d152df91670eef6e30 386 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 13 364 1.7E-129 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 N288_01245 b20dae74fc723e6591970943d2ab1fce 108 Gene3D G3DSA:1.10.10.10 1 107 5.6E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_01245 b20dae74fc723e6591970943d2ab1fce 108 SUPERFAMILY SSF46785 10 105 7.18E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_01245 b20dae74fc723e6591970943d2ab1fce 108 Pfam PF03551 Transcriptional regulator PadR-like family 14 87 4.1E-26 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal N288_03070 cfde6854654f11423e10bbef55e96058 236 SUPERFAMILY SSF53335 1 204 1.99E-41 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_03070 cfde6854654f11423e10bbef55e96058 236 Gene3D G3DSA:3.40.50.150 30 235 7.0E-47 T 12-10-2018 N288_03070 cfde6854654f11423e10bbef55e96058 236 Pfam PF08241 Methyltransferase domain 49 142 1.8E-26 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 N288_18545 1fb38ffa8a5756bbf0efbbf56308bbc3 195 Gene3D G3DSA:3.40.140.10 3 150 2.4E-47 T 12-10-2018 N288_18545 1fb38ffa8a5756bbf0efbbf56308bbc3 195 TIGRFAM TIGR02571 ComEB: ComE operon protein 2 3 147 9.7E-84 T 12-10-2018 IPR013404 Competence operon E, ComEB N288_18545 1fb38ffa8a5756bbf0efbbf56308bbc3 195 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 117 3.1E-28 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain N288_18545 1fb38ffa8a5756bbf0efbbf56308bbc3 195 SUPERFAMILY SSF53927 8 143 1.11E-40 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 N288_07005 5125178cd22177cef9480efe9971722d 310 SUPERFAMILY SSF53800 3 308 3.27E-93 T 12-10-2018 N288_07005 5125178cd22177cef9480efe9971722d 310 Gene3D G3DSA:3.40.50.1400 8 304 5.5E-108 T 12-10-2018 N288_07005 5125178cd22177cef9480efe9971722d 310 Pfam PF00762 Ferrochelatase 5 307 1.5E-84 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 N288_07005 5125178cd22177cef9480efe9971722d 310 Hamap MF_00323 Ferrochelatase [hemH]. 4 308 32.759 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 N288_07005 5125178cd22177cef9480efe9971722d 310 ProSitePatterns PS00534 Ferrochelatase signature. 178 196 - T 12-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 N288_07005 5125178cd22177cef9480efe9971722d 310 TIGRFAM TIGR00109 hemH: ferrochelatase 3 308 9.0E-103 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 N288_07005 5125178cd22177cef9480efe9971722d 310 Gene3D G3DSA:3.40.50.1400 148 289 5.5E-108 T 12-10-2018 N288_13565 6a4408be934e4c66b776d7a27ca8ed45 312 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 27 302 3.5E-73 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_13565 6a4408be934e4c66b776d7a27ca8ed45 312 Gene3D G3DSA:3.30.43.10 1 92 5.3E-23 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 N288_13565 6a4408be934e4c66b776d7a27ca8ed45 312 Pfam PF01565 FAD binding domain 40 168 2.5E-24 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 N288_13565 6a4408be934e4c66b776d7a27ca8ed45 312 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 312 88.153 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_13565 6a4408be934e4c66b776d7a27ca8ed45 312 Gene3D G3DSA:3.30.465.10 93 219 8.0E-39 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 N288_13565 6a4408be934e4c66b776d7a27ca8ed45 312 SUPERFAMILY SSF56176 15 196 1.92E-42 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 N288_13565 6a4408be934e4c66b776d7a27ca8ed45 312 SUPERFAMILY SSF56194 202 304 1.15E-36 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_13565 6a4408be934e4c66b776d7a27ca8ed45 312 Gene3D G3DSA:3.90.78.10 220 311 8.6E-35 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_13565 6a4408be934e4c66b776d7a27ca8ed45 312 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 204 300 7.3E-30 T 12-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_09890 d594d35bde5f2e7c9af29134658e946e 374 SUPERFAMILY SSF69055 282 372 7.32E-31 T 12-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 N288_09890 d594d35bde5f2e7c9af29134658e946e 374 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 1 373 45.569 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 N288_09890 d594d35bde5f2e7c9af29134658e946e 374 SUPERFAMILY SSF51735 1 140 8.1E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_09890 d594d35bde5f2e7c9af29134658e946e 374 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 136 219 7.7E-43 T 12-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 N288_09890 d594d35bde5f2e7c9af29134658e946e 374 Pfam PF13288 DXP reductoisomerase C-terminal domain 251 368 3.7E-43 T 12-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 N288_09890 d594d35bde5f2e7c9af29134658e946e 374 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 122 2.3E-38 T 12-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 N288_09890 d594d35bde5f2e7c9af29134658e946e 374 SUPERFAMILY SSF55347 116 254 1.11E-61 T 12-10-2018 N288_09890 d594d35bde5f2e7c9af29134658e946e 374 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 370 1.9E-160 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 N288_09890 d594d35bde5f2e7c9af29134658e946e 374 PIRSF PIRSF006205 1 374 1.3E-157 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 N288_09890 d594d35bde5f2e7c9af29134658e946e 374 Gene3D G3DSA:3.40.50.720 1 140 6.9E-46 T 12-10-2018 N288_09890 d594d35bde5f2e7c9af29134658e946e 374 Gene3D G3DSA:1.10.1740.10 293 374 1.9E-28 T 12-10-2018 N288_02070 9d5d0790fd03007c7b9fcfa78ead4dcd 402 Gene3D G3DSA:1.20.1250.20 2 387 3.1E-33 T 12-10-2018 N288_02070 9d5d0790fd03007c7b9fcfa78ead4dcd 402 SUPERFAMILY SSF103473 3 392 7.32E-43 T 12-10-2018 IPR036259 MFS transporter superfamily N288_02070 9d5d0790fd03007c7b9fcfa78ead4dcd 402 Pfam PF07690 Major Facilitator Superfamily 13 347 1.3E-28 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_01685 a9f9d232a48baf6a78060f061cdf4d78 228 Gene3D G3DSA:3.40.50.880 1 221 1.3E-72 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_01685 a9f9d232a48baf6a78060f061cdf4d78 228 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 219 6.0E-96 T 12-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 N288_01685 a9f9d232a48baf6a78060f061cdf4d78 228 SUPERFAMILY SSF52317 2 220 3.61E-76 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_01685 a9f9d232a48baf6a78060f061cdf4d78 228 SMART SM01211 1 220 1.2E-136 T 12-10-2018 N288_01685 a9f9d232a48baf6a78060f061cdf4d78 228 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 203 8.4E-45 T 12-10-2018 N288_01685 a9f9d232a48baf6a78060f061cdf4d78 228 PIRSF PIRSF001586 1 223 8.2E-91 T 12-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 N288_01685 a9f9d232a48baf6a78060f061cdf4d78 228 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 218 45.509 T 12-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 N288_12465 5443fbb47d4ee427ef65fdf9b74f8467 401 Gene3D G3DSA:3.90.1150.10 308 395 7.6E-26 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_12465 5443fbb47d4ee427ef65fdf9b74f8467 401 Gene3D G3DSA:3.90.1150.10 276 307 4.3E-8 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_12465 5443fbb47d4ee427ef65fdf9b74f8467 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 35 391 3.2E-134 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 N288_12465 5443fbb47d4ee427ef65fdf9b74f8467 401 SUPERFAMILY SSF53383 47 392 8.78E-106 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_12465 5443fbb47d4ee427ef65fdf9b74f8467 401 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 218 232 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 N288_12465 5443fbb47d4ee427ef65fdf9b74f8467 401 Gene3D G3DSA:3.40.640.10 33 275 1.7E-89 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_12465 5443fbb47d4ee427ef65fdf9b74f8467 401 PIRSF PIRSF001434 26 394 1.1E-127 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 N288_23665 17596d58302a85ca4c1d18fe4b5e8051 335 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 14 332 25.245 T 12-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23665 17596d58302a85ca4c1d18fe4b5e8051 335 Pfam PF00146 NADH dehydrogenase 23 326 6.3E-126 T 12-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23665 17596d58302a85ca4c1d18fe4b5e8051 335 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 216 229 - T 12-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_01270 c337a03c717c9ee9ebfe624ec7a00ca6 252 Pfam PF11495 Archaeal transcriptional regulator TrmB 101 223 4.8E-7 T 12-10-2018 IPR021586 Transcription regulator TrmB, C-terminal N288_01270 c337a03c717c9ee9ebfe624ec7a00ca6 252 Pfam PF01978 Sugar-specific transcriptional regulator TrmB 2 71 1.6E-16 T 12-10-2018 IPR002831 Transcription regulator TrmB, N-terminal N288_01270 c337a03c717c9ee9ebfe624ec7a00ca6 252 Gene3D G3DSA:1.10.10.10 1 94 1.6E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_01270 c337a03c717c9ee9ebfe624ec7a00ca6 252 SUPERFAMILY SSF46785 1 90 1.15E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_18405 51300ebcc9cdae185bc475c731bd23b3 156 SUPERFAMILY SSF55486 3 155 1.07E-45 T 12-10-2018 N288_18405 51300ebcc9cdae185bc475c731bd23b3 156 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 153 3.6E-43 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 N288_18405 51300ebcc9cdae185bc475c731bd23b3 156 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 122 132 - T 12-10-2018 IPR020549 Endoribonuclease YbeY, conserved site N288_18405 51300ebcc9cdae185bc475c731bd23b3 156 Gene3D G3DSA:3.40.390.30 1 156 2.0E-46 T 12-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 N288_18405 51300ebcc9cdae185bc475c731bd23b3 156 Pfam PF02130 Uncharacterized protein family UPF0054 15 152 5.0E-49 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 N288_18405 51300ebcc9cdae185bc475c731bd23b3 156 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 156 24.654 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 N288_04765 ec2ed4b481d474f9e15fb5c070fd510e 153 SUPERFAMILY SSF55811 5 143 1.22E-25 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_04765 ec2ed4b481d474f9e15fb5c070fd510e 153 Gene3D G3DSA:3.90.79.10 1 145 1.4E-35 T 12-10-2018 N288_04765 ec2ed4b481d474f9e15fb5c070fd510e 153 Pfam PF00293 NUDIX domain 16 126 1.3E-11 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_04765 ec2ed4b481d474f9e15fb5c070fd510e 153 ProSitePatterns PS00893 Nudix box signature. 46 67 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_23330 cd7241d912012d5d9e700ac1a3fd72a2 254 PIRSF PIRSF016557 1 254 1.7E-104 T 12-10-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 N288_23330 cd7241d912012d5d9e700ac1a3fd72a2 254 Gene3D G3DSA:3.20.20.140 1 254 4.0E-96 T 12-10-2018 N288_23330 cd7241d912012d5d9e700ac1a3fd72a2 254 SUPERFAMILY SSF89550 1 212 7.85E-14 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 N288_08305 075a8e83961592bb118dbc641d9578c7 66 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 6 60 9.5E-21 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 N288_08305 075a8e83961592bb118dbc641d9578c7 66 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 21 30 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 N288_08305 075a8e83961592bb118dbc641d9578c7 66 Gene3D G3DSA:1.10.8.910 6 66 9.0E-29 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily N288_08305 075a8e83961592bb118dbc641d9578c7 66 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 39 53 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 N288_19240 ddbbee2d0cc3ac4e4aa8474493ff8e57 555 TIGRFAM TIGR02902 spore_lonB: ATP-dependent protease LonB 5 532 2.2E-277 T 12-10-2018 IPR014251 Sporulation protease LonB N288_19240 ddbbee2d0cc3ac4e4aa8474493ff8e57 555 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 93 266 1.6E-18 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 N288_19240 ddbbee2d0cc3ac4e4aa8474493ff8e57 555 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 442 450 - T 12-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 N288_19240 ddbbee2d0cc3ac4e4aa8474493ff8e57 555 Gene3D G3DSA:3.30.230.10 344 552 7.4E-52 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup N288_19240 ddbbee2d0cc3ac4e4aa8474493ff8e57 555 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 344 534 3.7E-36 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 N288_19240 ddbbee2d0cc3ac4e4aa8474493ff8e57 555 SUPERFAMILY SSF54211 351 532 2.96E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_19240 ddbbee2d0cc3ac4e4aa8474493ff8e57 555 Gene3D G3DSA:3.40.50.300 52 264 3.6E-32 T 12-10-2018 N288_19240 ddbbee2d0cc3ac4e4aa8474493ff8e57 555 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 97 116 8.6E-33 T 12-10-2018 N288_19240 ddbbee2d0cc3ac4e4aa8474493ff8e57 555 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 352 368 8.6E-33 T 12-10-2018 N288_19240 ddbbee2d0cc3ac4e4aa8474493ff8e57 555 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 469 488 8.6E-33 T 12-10-2018 N288_19240 ddbbee2d0cc3ac4e4aa8474493ff8e57 555 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 439 458 8.6E-33 T 12-10-2018 N288_19240 ddbbee2d0cc3ac4e4aa8474493ff8e57 555 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 492 510 8.6E-33 T 12-10-2018 N288_19240 ddbbee2d0cc3ac4e4aa8474493ff8e57 555 SMART SM00382 89 267 5.6E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_19240 ddbbee2d0cc3ac4e4aa8474493ff8e57 555 SUPERFAMILY SSF52540 56 328 2.31E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_23590 6ef8eef35d663f234d50286cf3a9ab6c 200 PIRSF PIRSF015592 1 200 1.9E-72 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 N288_23590 6ef8eef35d663f234d50286cf3a9ab6c 200 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 129 143 - T 12-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 N288_23590 6ef8eef35d663f234d50286cf3a9ab6c 200 Gene3D G3DSA:3.40.630.20 1 200 1.9E-69 T 12-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 N288_23590 6ef8eef35d663f234d50286cf3a9ab6c 200 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 198 36.485 T 12-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 N288_23590 6ef8eef35d663f234d50286cf3a9ab6c 200 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 161 173 2.0E-26 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 N288_23590 6ef8eef35d663f234d50286cf3a9ab6c 200 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 2.0E-26 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 N288_23590 6ef8eef35d663f234d50286cf3a9ab6c 200 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 2.0E-26 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 N288_23590 6ef8eef35d663f234d50286cf3a9ab6c 200 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 131 147 2.0E-26 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 N288_23590 6ef8eef35d663f234d50286cf3a9ab6c 200 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 2.0E-26 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 N288_23590 6ef8eef35d663f234d50286cf3a9ab6c 200 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 12-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 N288_23590 6ef8eef35d663f234d50286cf3a9ab6c 200 Pfam PF01470 Pyroglutamyl peptidase 2 199 2.3E-61 T 12-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 N288_23590 6ef8eef35d663f234d50286cf3a9ab6c 200 SUPERFAMILY SSF53182 1 200 1.57E-62 T 12-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 N288_00470 c0938dd04eec14a5cc73ee9f0b4e0cc0 291 Pfam PF01063 Amino-transferase class IV 29 251 3.9E-60 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 N288_00470 c0938dd04eec14a5cc73ee9f0b4e0cc0 291 Gene3D G3DSA:3.30.470.10 1 123 6.2E-36 T 12-10-2018 N288_00470 c0938dd04eec14a5cc73ee9f0b4e0cc0 291 SUPERFAMILY SSF56752 2 273 6.54E-70 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 N288_00470 c0938dd04eec14a5cc73ee9f0b4e0cc0 291 Gene3D G3DSA:3.20.10.10 124 271 1.9E-43 T 12-10-2018 N288_05705 43cf9cdfe905b0dfbe0cc112bd0670dd 537 Gene3D G3DSA:3.10.105.10 294 511 3.5E-175 T 12-10-2018 N288_05705 43cf9cdfe905b0dfbe0cc112bd0670dd 537 Gene3D G3DSA:3.90.76.10 65 211 3.5E-175 T 12-10-2018 N288_05705 43cf9cdfe905b0dfbe0cc112bd0670dd 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 93 455 2.7E-113 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain N288_05705 43cf9cdfe905b0dfbe0cc112bd0670dd 537 Gene3D G3DSA:3.40.190.10 212 524 3.5E-175 T 12-10-2018 N288_05705 43cf9cdfe905b0dfbe0cc112bd0670dd 537 PIRSF PIRSF002741 1 537 2.5E-144 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 N288_05705 43cf9cdfe905b0dfbe0cc112bd0670dd 537 SUPERFAMILY SSF53850 44 531 1.47E-159 T 12-10-2018 N288_10490 66d64d7e86500cb034c251c7284b3161 369 Pfam PF04471 Restriction endonuclease 228 343 3.0E-36 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 N288_10490 66d64d7e86500cb034c251c7284b3161 369 Gene3D G3DSA:3.40.91.100 192 364 2.1E-8 T 12-10-2018 N288_10490 66d64d7e86500cb034c251c7284b3161 369 SUPERFAMILY SSF52980 232 348 1.93E-19 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 N288_10490 66d64d7e86500cb034c251c7284b3161 369 Pfam PF14338 Mrr N-terminal domain 102 185 4.1E-17 T 12-10-2018 IPR025745 Restriction system protein Mrr-like N-terminal domain N288_08320 882690b0fb150b55a5b0393e4c494214 372 Pfam PF13556 PucR C-terminal helix-turn-helix domain 307 363 2.5E-17 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain N288_08320 882690b0fb150b55a5b0393e4c494214 372 Pfam PF05651 Putative sugar diacid recognition 4 135 2.6E-44 T 12-10-2018 IPR008599 Putative sugar diacid recognition N288_08320 882690b0fb150b55a5b0393e4c494214 372 Gene3D G3DSA:1.10.10.2840 245 368 4.5E-21 T 12-10-2018 N288_24760 757c1df127ac24e0c9f5392fd351f8ab 226 Gene3D G3DSA:1.10.10.10 128 226 2.8E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_24760 757c1df127ac24e0c9f5392fd351f8ab 226 Pfam PF00072 Response regulator receiver domain 4 113 5.6E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_24760 757c1df127ac24e0c9f5392fd351f8ab 226 SUPERFAMILY SSF52172 3 126 3.84E-42 T 12-10-2018 IPR011006 CheY-like superfamily N288_24760 757c1df127ac24e0c9f5392fd351f8ab 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 222 2.2E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_24760 757c1df127ac24e0c9f5392fd351f8ab 226 Gene3D G3DSA:3.40.50.2300 2 127 5.0E-39 T 12-10-2018 N288_24760 757c1df127ac24e0c9f5392fd351f8ab 226 SMART SM00862 146 223 1.0E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_24760 757c1df127ac24e0c9f5392fd351f8ab 226 SMART SM00448 2 112 1.1E-42 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_24760 757c1df127ac24e0c9f5392fd351f8ab 226 SUPERFAMILY SSF46894 123 224 4.82E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_23810 06b9a6a6e8db0b3b72c1b8f29304fa92 185 Pfam PF02659 Putative manganese efflux pump 34 181 2.1E-40 T 12-10-2018 IPR003810 Putative manganese efflux pump N288_23810 06b9a6a6e8db0b3b72c1b8f29304fa92 185 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 6 184 21.648 T 12-10-2018 IPR022929 Putative manganese efflux pump MntP N288_18670 0e039635839aea8311faa9ba673651cd 212 Pfam PF13649 Methyltransferase domain 49 139 1.1E-13 T 12-10-2018 N288_18670 0e039635839aea8311faa9ba673651cd 212 Gene3D G3DSA:3.40.50.150 24 211 1.4E-47 T 12-10-2018 N288_18670 0e039635839aea8311faa9ba673651cd 212 Hamap MF_02100 Uncharacterized methyltransferase . 2 212 43.991 T 12-10-2018 IPR023553 Uncharacterised methyltransferase, YrrT GO:0008168 N288_18670 0e039635839aea8311faa9ba673651cd 212 SUPERFAMILY SSF53335 7 194 1.64E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_04225 cb9fc9cb6a19ae484334ad2065da5752 139 SMART SM00226 4 137 4.2E-66 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I N288_04225 cb9fc9cb6a19ae484334ad2065da5752 139 TIGRFAM TIGR02691 arsC_pI258_fam: arsenate reductase (thioredoxin) 6 134 1.2E-73 T 12-10-2018 IPR014064 Arsenate reductase ArsC GO:0004725|GO:0030612|GO:0046685 N288_04225 cb9fc9cb6a19ae484334ad2065da5752 139 SUPERFAMILY SSF52788 4 136 1.23E-46 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily N288_04225 cb9fc9cb6a19ae484334ad2065da5752 139 Gene3D G3DSA:3.40.50.2300 1 139 2.1E-60 T 12-10-2018 N288_04225 cb9fc9cb6a19ae484334ad2065da5752 139 Hamap MF_01624 Arsenate reductase [arsC]. 1 137 47.029 T 12-10-2018 IPR014064 Arsenate reductase ArsC GO:0004725|GO:0030612|GO:0046685 N288_04225 cb9fc9cb6a19ae484334ad2065da5752 139 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 134 3.3E-25 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I N288_22860 ba2b2c122f042c45b2853577919fb27c 424 Gene3D G3DSA:3.40.190.10 53 383 1.2E-95 T 12-10-2018 N288_22860 ba2b2c122f042c45b2853577919fb27c 424 Gene3D G3DSA:3.40.190.10 150 413 1.2E-95 T 12-10-2018 N288_22860 ba2b2c122f042c45b2853577919fb27c 424 SUPERFAMILY SSF53850 19 423 5.72E-77 T 12-10-2018 N288_22860 ba2b2c122f042c45b2853577919fb27c 424 Pfam PF13416 Bacterial extracellular solute-binding protein 55 354 5.9E-41 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein N288_21055 a864987938bac4643639276bf49d528e 312 PIRSF PIRSF005963 5 312 1.5E-138 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 N288_21055 a864987938bac4643639276bf49d528e 312 SMART SM00729 63 271 1.2E-19 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 N288_21055 a864987938bac4643639276bf49d528e 312 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 7 51 2.5E-12 T 12-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 N288_21055 a864987938bac4643639276bf49d528e 312 TIGRFAM TIGR00510 lipA: lipoyl synthase 7 300 6.6E-123 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 N288_21055 a864987938bac4643639276bf49d528e 312 Gene3D G3DSA:3.20.20.70 18 274 1.8E-24 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_21055 a864987938bac4643639276bf49d528e 312 Hamap MF_00206 Lipoyl synthase [lipA]. 1 301 145.986 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 N288_21055 a864987938bac4643639276bf49d528e 312 SUPERFAMILY SSF102114 26 294 6.41E-66 T 12-10-2018 N288_21055 a864987938bac4643639276bf49d528e 312 Pfam PF04055 Radical SAM superfamily 71 230 6.5E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 N288_07375 d99f6390d27487cd0cb915a1fef6b32a 280 Gene3D G3DSA:1.10.3720.10 1 267 3.7E-65 T 12-10-2018 IPR035906 MetI-like superfamily N288_07375 d99f6390d27487cd0cb915a1fef6b32a 280 SUPERFAMILY SSF161098 6 280 6.28E-69 T 12-10-2018 IPR035906 MetI-like superfamily N288_07375 d99f6390d27487cd0cb915a1fef6b32a 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 273 8.1E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_01435 77d6fae5a6f2622a017b70c2fd1f239a 457 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 457 33.725 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_01435 77d6fae5a6f2622a017b70c2fd1f239a 457 Gene3D G3DSA:3.90.190.20 316 457 3.1E-40 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 N288_01435 77d6fae5a6f2622a017b70c2fd1f239a 457 SUPERFAMILY SSF53244 318 456 1.03E-33 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 N288_01435 77d6fae5a6f2622a017b70c2fd1f239a 457 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 32 456 2.2E-133 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_01435 77d6fae5a6f2622a017b70c2fd1f239a 457 Pfam PF01225 Mur ligase family, catalytic domain 27 100 2.6E-12 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 N288_01435 77d6fae5a6f2622a017b70c2fd1f239a 457 Gene3D G3DSA:3.40.1190.10 87 315 1.9E-64 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 N288_01435 77d6fae5a6f2622a017b70c2fd1f239a 457 SUPERFAMILY SSF53623 105 314 8.5E-51 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 N288_01435 77d6fae5a6f2622a017b70c2fd1f239a 457 Gene3D G3DSA:3.40.1390.10 2 81 2.5E-23 T 12-10-2018 N288_01435 77d6fae5a6f2622a017b70c2fd1f239a 457 Pfam PF08245 Mur ligase middle domain 111 296 1.0E-45 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 N288_01435 77d6fae5a6f2622a017b70c2fd1f239a 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 319 396 1.4E-11 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 N288_01435 77d6fae5a6f2622a017b70c2fd1f239a 457 SUPERFAMILY SSF63418 14 102 2.49E-24 T 12-10-2018 IPR035911 MurE/MurF, N-terminal N288_23455 2452c95131093287595469d5f75aba84 292 Pfam PF01381 Helix-turn-helix 10 60 9.4E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_23455 2452c95131093287595469d5f75aba84 292 SMART SM00530 9 63 6.6E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_23455 2452c95131093287595469d5f75aba84 292 Pfam PF13424 Tetratricopeptide repeat 158 230 4.4E-8 T 12-10-2018 N288_23455 2452c95131093287595469d5f75aba84 292 Gene3D G3DSA:1.25.40.10 1 292 9.8E-76 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_23455 2452c95131093287595469d5f75aba84 292 SUPERFAMILY SSF48452 122 267 1.25E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_23455 2452c95131093287595469d5f75aba84 292 SUPERFAMILY SSF47413 5 70 1.87E-10 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_17040 3cfeda0c47074e1a5b26fbaf9bd7068b 320 TIGRFAM TIGR02748 GerC3_HepT: heptaprenyl diphosphate synthase component II 2 320 4.4E-166 T 12-10-2018 IPR014119 Heptaprenyl diphosphate synthase component II KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 N288_17040 3cfeda0c47074e1a5b26fbaf9bd7068b 320 Gene3D G3DSA:1.10.600.10 7 320 4.9E-104 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily N288_17040 3cfeda0c47074e1a5b26fbaf9bd7068b 320 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site N288_17040 3cfeda0c47074e1a5b26fbaf9bd7068b 320 Pfam PF00348 Polyprenyl synthetase 31 271 3.5E-71 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 N288_17040 3cfeda0c47074e1a5b26fbaf9bd7068b 320 SUPERFAMILY SSF48576 7 319 1.46E-89 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily N288_17040 3cfeda0c47074e1a5b26fbaf9bd7068b 320 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site N288_25260 cf23757586f5a95d2b03d8bcc89034d0 117 Gene3D G3DSA:3.30.70.1060 1 117 1.8E-27 T 12-10-2018 N288_25260 cf23757586f5a95d2b03d8bcc89034d0 117 Pfam PF03795 YCII-related domain 1 117 4.9E-20 T 12-10-2018 IPR005545 YCII-related N288_25260 cf23757586f5a95d2b03d8bcc89034d0 117 SUPERFAMILY SSF54909 1 117 6.97E-29 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel N288_07825 a514aed8f513c3fdef36f92ea4a384cc 293 SUPERFAMILY SSF48179 190 290 7.91E-28 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_07825 a514aed8f513c3fdef36f92ea4a384cc 293 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 190 286 9.0E-31 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 N288_07825 a514aed8f513c3fdef36f92ea4a384cc 293 SUPERFAMILY SSF51735 4 187 3.08E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_07825 a514aed8f513c3fdef36f92ea4a384cc 293 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 185 2.6E-56 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 N288_07825 a514aed8f513c3fdef36f92ea4a384cc 293 Gene3D G3DSA:1.10.1040.10 193 293 4.4E-32 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 N288_07825 a514aed8f513c3fdef36f92ea4a384cc 293 Gene3D G3DSA:3.40.50.720 1 192 6.3E-59 T 12-10-2018 N288_07825 a514aed8f513c3fdef36f92ea4a384cc 293 PIRSF PIRSF000105 2 293 2.1E-91 T 12-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 N288_13315 685f6b0f3d6c18432e6d773d7c3f07c9 448 SMART SM00327 242 407 0.0021 T 12-10-2018 IPR002035 von Willebrand factor, type A N288_13315 685f6b0f3d6c18432e6d773d7c3f07c9 448 Gene3D G3DSA:3.40.50.410 239 405 1.7E-6 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_13315 685f6b0f3d6c18432e6d773d7c3f07c9 448 SUPERFAMILY SSF53300 245 379 5.4E-7 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_13315 685f6b0f3d6c18432e6d773d7c3f07c9 448 Pfam PF01882 Protein of unknown function DUF58 204 288 4.8E-19 T 12-10-2018 IPR002881 Domain of unknown function DUF58 N288_10945 c5dad440d255d49bab5e2f973753296c 627 SUPERFAMILY SSF50465 267 365 1.69E-24 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal N288_10945 c5dad440d255d49bab5e2f973753296c 627 SUPERFAMILY SSF46785 583 624 1.58E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_10945 c5dad440d255d49bab5e2f973753296c 627 Pfam PF09107 Elongation factor SelB, winged helix 585 624 2.2E-14 T 12-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 N288_10945 c5dad440d255d49bab5e2f973753296c 627 Gene3D G3DSA:2.40.30.10 178 296 2.7E-31 T 12-10-2018 N288_10945 c5dad440d255d49bab5e2f973753296c 627 Gene3D G3DSA:1.10.10.2770 439 568 4.2E-14 T 12-10-2018 N288_10945 c5dad440d255d49bab5e2f973753296c 627 Pfam PF00009 Elongation factor Tu GTP binding domain 4 134 1.4E-31 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_10945 c5dad440d255d49bab5e2f973753296c 627 Gene3D G3DSA:3.40.50.300 1 174 1.0E-42 T 12-10-2018 N288_10945 c5dad440d255d49bab5e2f973753296c 627 PRINTS PR00315 GTP-binding elongation factor signature 112 121 1.2E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_10945 c5dad440d255d49bab5e2f973753296c 627 PRINTS PR00315 GTP-binding elongation factor signature 7 20 1.2E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_10945 c5dad440d255d49bab5e2f973753296c 627 PRINTS PR00315 GTP-binding elongation factor signature 75 86 1.2E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_10945 c5dad440d255d49bab5e2f973753296c 627 PRINTS PR00315 GTP-binding elongation factor signature 59 69 1.2E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_10945 c5dad440d255d49bab5e2f973753296c 627 Pfam PF03144 Elongation factor Tu domain 2 196 262 1.7E-8 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 N288_10945 c5dad440d255d49bab5e2f973753296c 627 SUPERFAMILY SSF50447 176 266 2.29E-21 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily N288_10945 c5dad440d255d49bab5e2f973753296c 627 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 123 3.2E-12 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 N288_10945 c5dad440d255d49bab5e2f973753296c 627 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 7 626 1.6E-105 T 12-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 N288_10945 c5dad440d255d49bab5e2f973753296c 627 SUPERFAMILY SSF52540 3 170 5.02E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_10945 c5dad440d255d49bab5e2f973753296c 627 Gene3D G3DSA:1.10.10.10 570 625 5.8E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_24205 a20c76d20f20e72a66b7b7406875a6f2 193 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 43.056 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 N288_24205 a20c76d20f20e72a66b7b7406875a6f2 193 SUPERFAMILY SSF52096 11 191 6.33E-71 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_24205 a20c76d20f20e72a66b7b7406875a6f2 193 Pfam PF00574 Clp protease 12 191 8.3E-85 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA N288_24205 a20c76d20f20e72a66b7b7406875a6f2 193 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 12-10-2018 IPR033135 ClpP, histidine active site N288_24205 a20c76d20f20e72a66b7b7406875a6f2 193 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 9.7E-51 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 N288_24205 a20c76d20f20e72a66b7b7406875a6f2 193 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 9.7E-51 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 N288_24205 a20c76d20f20e72a66b7b7406875a6f2 193 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 9.7E-51 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 N288_24205 a20c76d20f20e72a66b7b7406875a6f2 193 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 9.7E-51 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 N288_24205 a20c76d20f20e72a66b7b7406875a6f2 193 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 9.7E-51 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 N288_24205 a20c76d20f20e72a66b7b7406875a6f2 193 Gene3D G3DSA:3.90.226.10 1 192 2.2E-80 T 12-10-2018 N288_24205 a20c76d20f20e72a66b7b7406875a6f2 193 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 191 7.7E-100 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 N288_09305 ee8017ae4c7285dc0efdb4eb86cf989e 162 Pfam PF01252 Signal peptidase (SPase) II 6 144 6.7E-40 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 N288_09305 ee8017ae4c7285dc0efdb4eb86cf989e 162 TIGRFAM TIGR00077 lspA: signal peptidase II 2 151 7.9E-48 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 N288_09305 ee8017ae4c7285dc0efdb4eb86cf989e 162 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 150 16.951 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 N288_09305 ee8017ae4c7285dc0efdb4eb86cf989e 162 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 125 141 2.7E-17 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 N288_09305 ee8017ae4c7285dc0efdb4eb86cf989e 162 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 45 53 2.7E-17 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 N288_09305 ee8017ae4c7285dc0efdb4eb86cf989e 162 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 89 104 2.7E-17 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 N288_09305 ee8017ae4c7285dc0efdb4eb86cf989e 162 ProSitePatterns PS00855 Signal peptidases II signature. 92 104 - T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 N288_17385 cc2996cd0020b74857d85864f487f4d2 117 Gene3D G3DSA:3.40.630.30 5 108 1.1E-10 T 12-10-2018 N288_17385 cc2996cd0020b74857d85864f487f4d2 117 Pfam PF00583 Acetyltransferase (GNAT) family 33 97 1.6E-7 T 12-10-2018 IPR000182 GNAT domain N288_17385 cc2996cd0020b74857d85864f487f4d2 117 SUPERFAMILY SSF55729 6 94 2.57E-11 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_18780 59bb89b90957c19b19087de6316ffcf5 380 SUPERFAMILY SSF53383 2 377 1.22E-104 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_18780 59bb89b90957c19b19087de6316ffcf5 380 PIRSF PIRSF005572 1 380 2.6E-121 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 N288_18780 59bb89b90957c19b19087de6316ffcf5 380 Pfam PF00266 Aminotransferase class-V 4 365 1.3E-78 T 12-10-2018 IPR000192 Aminotransferase class V domain N288_18780 59bb89b90957c19b19087de6316ffcf5 380 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 192 211 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site N288_18780 59bb89b90957c19b19087de6316ffcf5 380 Gene3D G3DSA:3.90.1150.10 4 367 3.2E-139 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_18780 59bb89b90957c19b19087de6316ffcf5 380 Gene3D G3DSA:1.10.260.50 15 278 3.2E-139 T 12-10-2018 N288_18780 59bb89b90957c19b19087de6316ffcf5 380 Gene3D G3DSA:3.40.640.10 61 235 3.2E-139 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_10455 a15741e6050d8e96b2baade3f9232108 424 SUPERFAMILY SSF51735 179 421 7.41E-81 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_10455 a15741e6050d8e96b2baade3f9232108 424 Gene3D G3DSA:3.40.50.720 139 422 8.9E-86 T 12-10-2018 N288_10455 a15741e6050d8e96b2baade3f9232108 424 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 257 268 3.5E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10455 a15741e6050d8e96b2baade3f9232108 424 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 329 348 3.5E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10455 a15741e6050d8e96b2baade3f9232108 424 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 309 317 3.5E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10455 a15741e6050d8e96b2baade3f9232108 424 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 384 404 6.4E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10455 a15741e6050d8e96b2baade3f9232108 424 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 350 367 6.4E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10455 a15741e6050d8e96b2baade3f9232108 424 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 303 319 6.4E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10455 a15741e6050d8e96b2baade3f9232108 424 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 329 348 6.4E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10455 a15741e6050d8e96b2baade3f9232108 424 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 6.4E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10455 a15741e6050d8e96b2baade3f9232108 424 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 257 268 6.4E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10455 a15741e6050d8e96b2baade3f9232108 424 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 190 419 3.1E-63 T 12-10-2018 N288_15770 05ad65880ed4deea3388520a4ed03856 406 Pfam PF07690 Major Facilitator Superfamily 27 246 4.6E-31 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_15770 05ad65880ed4deea3388520a4ed03856 406 SUPERFAMILY SSF103473 18 393 5.23E-70 T 12-10-2018 IPR036259 MFS transporter superfamily N288_15770 05ad65880ed4deea3388520a4ed03856 406 Gene3D G3DSA:1.20.1250.20 17 392 3.2E-62 T 12-10-2018 N288_04425 aeb94c181bd51f2b48afd010950f38d0 147 ProSitePatterns PS00893 Nudix box signature. 44 65 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_04425 aeb94c181bd51f2b48afd010950f38d0 147 SUPERFAMILY SSF55811 2 145 7.04E-21 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_04425 aeb94c181bd51f2b48afd010950f38d0 147 Pfam PF00293 NUDIX domain 2 143 7.0E-17 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_04425 aeb94c181bd51f2b48afd010950f38d0 147 Gene3D G3DSA:3.90.79.10 1 147 1.4E-24 T 12-10-2018 N288_14030 9b68d3499e7073a7643e8994b8fff504 139 Gene3D G3DSA:3.10.180.10 2 128 2.9E-19 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_14030 9b68d3499e7073a7643e8994b8fff504 139 SUPERFAMILY SSF54593 5 128 3.03E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_14030 9b68d3499e7073a7643e8994b8fff504 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 122 1.4E-7 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_13270 73a16674ae69de7f44d9087dc75f74d3 543 Gene3D G3DSA:3.90.480.20 13 378 4.7E-132 T 12-10-2018 N288_13270 73a16674ae69de7f44d9087dc75f74d3 543 SUPERFAMILY SSF55124 270 401 2.29E-20 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 N288_13270 73a16674ae69de7f44d9087dc75f74d3 543 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 61 125 3.2E-20 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 N288_13270 73a16674ae69de7f44d9087dc75f74d3 543 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 312 375 4.6E-15 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 N288_13270 73a16674ae69de7f44d9087dc75f74d3 543 SUPERFAMILY SSF55124 11 134 1.8E-29 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 N288_13270 73a16674ae69de7f44d9087dc75f74d3 543 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 135 290 3.2E-29 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 N288_13270 73a16674ae69de7f44d9087dc75f74d3 543 SUPERFAMILY SSF56014 387 526 1.83E-34 T 12-10-2018 N288_13270 73a16674ae69de7f44d9087dc75f74d3 543 PRINTS PR00397 Sirohaem Fe-binding site signature 434 452 2.7E-8 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 N288_13270 73a16674ae69de7f44d9087dc75f74d3 543 PRINTS PR00397 Sirohaem Fe-binding site signature 390 408 2.7E-8 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 N288_13270 73a16674ae69de7f44d9087dc75f74d3 543 Gene3D G3DSA:3.30.413.10 389 526 2.3E-37 T 12-10-2018 N288_13270 73a16674ae69de7f44d9087dc75f74d3 543 Gene3D G3DSA:3.30.413.10 127 307 4.7E-132 T 12-10-2018 N288_13270 73a16674ae69de7f44d9087dc75f74d3 543 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 393 532 2.4E-13 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 N288_13270 73a16674ae69de7f44d9087dc75f74d3 543 SUPERFAMILY SSF56014 135 294 1.57E-37 T 12-10-2018 N288_13270 73a16674ae69de7f44d9087dc75f74d3 543 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 434 450 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 N288_15725 122d20cdf91f2457e114f6beef19d445 420 TIGRFAM TIGR01224 hutI: imidazolonepropionase 36 415 2.1E-148 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 N288_15725 122d20cdf91f2457e114f6beef19d445 420 Hamap MF_00372 Imidazolonepropionase [hutI]. 5 418 43.137 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 N288_15725 122d20cdf91f2457e114f6beef19d445 420 Pfam PF01979 Amidohydrolase family 77 415 4.9E-25 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 N288_15725 122d20cdf91f2457e114f6beef19d445 420 Gene3D G3DSA:3.20.20.140 81 378 1.8E-172 T 12-10-2018 N288_15725 122d20cdf91f2457e114f6beef19d445 420 SUPERFAMILY SSF51338 34 420 3.14E-18 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_15725 122d20cdf91f2457e114f6beef19d445 420 SUPERFAMILY SSF51556 80 379 1.93E-87 T 12-10-2018 IPR032466 Metal-dependent hydrolase N288_15725 122d20cdf91f2457e114f6beef19d445 420 Gene3D G3DSA:2.30.40.10 9 415 1.8E-172 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_05490 80bd9a54924ffe756769be68f1c80094 253 SMART SM00849 6 215 0.0083 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_05490 80bd9a54924ffe756769be68f1c80094 253 SUPERFAMILY SSF56281 9 253 3.11E-17 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_05490 80bd9a54924ffe756769be68f1c80094 253 Gene3D G3DSA:3.60.15.10 1 252 3.9E-66 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_05490 80bd9a54924ffe756769be68f1c80094 253 Pfam PF13483 Beta-lactamase superfamily domain 8 205 6.1E-11 T 12-10-2018 N288_17235 3587df2b9d174bd123e9f475dca59efd 82 PRINTS PR00352 3Fe-4S ferredoxin signature 55 67 6.1E-8 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 N288_17235 3587df2b9d174bd123e9f475dca59efd 82 PRINTS PR00352 3Fe-4S ferredoxin signature 7 18 6.1E-8 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 N288_17235 3587df2b9d174bd123e9f475dca59efd 82 PRINTS PR00352 3Fe-4S ferredoxin signature 18 28 6.1E-8 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 N288_17235 3587df2b9d174bd123e9f475dca59efd 82 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 7 69 5.8E-21 T 12-10-2018 N288_17235 3587df2b9d174bd123e9f475dca59efd 82 SUPERFAMILY SSF54862 4 73 1.59E-13 T 12-10-2018 N288_17235 3587df2b9d174bd123e9f475dca59efd 82 Gene3D G3DSA:3.30.70.20 2 82 5.7E-35 T 12-10-2018 N288_00590 922056225c136ab98561259d2122cd32 182 PIRSF PIRSF015034 1 182 2.4E-63 T 12-10-2018 IPR025542 YacH protein N288_00590 922056225c136ab98561259d2122cd32 182 SUPERFAMILY SSF46600 138 175 2.75E-6 T 12-10-2018 IPR036876 UVR domain superfamily N288_00590 922056225c136ab98561259d2122cd32 182 Pfam PF02151 UvrB/uvrC motif 140 174 2.4E-5 T 12-10-2018 IPR001943 UVR domain GO:0005515 N288_16260 8b3895702095109869e8e674a5ee2781 147 Pfam PF01641 SelR domain 7 125 7.5E-50 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 N288_16260 8b3895702095109869e8e674a5ee2781 147 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 3 126 37.533 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 N288_16260 8b3895702095109869e8e674a5ee2781 147 Gene3D G3DSA:2.170.150.20 1 143 2.6E-61 T 12-10-2018 N288_16260 8b3895702095109869e8e674a5ee2781 147 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 2 134 9.0E-66 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 N288_16260 8b3895702095109869e8e674a5ee2781 147 SUPERFAMILY SSF51316 2 141 5.23E-61 T 12-10-2018 IPR011057 Mss4-like superfamily N288_14785 57370c06648dc231e2931dea24c5f1ec 183 TIGRFAM TIGR02359 thiW: energy coupling factor transporter S component ThiW 5 157 7.5E-50 T 12-10-2018 IPR012652 Energy coupling factor transporter S component ThiW N288_14785 57370c06648dc231e2931dea24c5f1ec 183 Gene3D G3DSA:1.10.1760.20 2 166 1.2E-13 T 12-10-2018 N288_14785 57370c06648dc231e2931dea24c5f1ec 183 Pfam PF09512 Thiamine-precursor transporter protein (ThiW) 7 155 2.1E-55 T 12-10-2018 IPR012652 Energy coupling factor transporter S component ThiW N288_14785 57370c06648dc231e2931dea24c5f1ec 183 PIRSF PIRSF024534 1 165 4.5E-52 T 12-10-2018 IPR012652 Energy coupling factor transporter S component ThiW N288_16345 a0531438ae7f0b9f12b2df5470013f28 165 Pfam PF00186 Dihydrofolate reductase 2 161 2.6E-65 T 12-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 N288_16345 a0531438ae7f0b9f12b2df5470013f28 165 Gene3D G3DSA:3.40.430.10 1 165 8.2E-66 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 N288_16345 a0531438ae7f0b9f12b2df5470013f28 165 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 12-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 N288_16345 a0531438ae7f0b9f12b2df5470013f28 165 PRINTS PR00070 Dihydrofolate reductase signature 13 23 4.4E-17 T 12-10-2018 N288_16345 a0531438ae7f0b9f12b2df5470013f28 165 PRINTS PR00070 Dihydrofolate reductase signature 40 51 4.4E-17 T 12-10-2018 N288_16345 a0531438ae7f0b9f12b2df5470013f28 165 PRINTS PR00070 Dihydrofolate reductase signature 27 35 4.4E-17 T 12-10-2018 N288_16345 a0531438ae7f0b9f12b2df5470013f28 165 PRINTS PR00070 Dihydrofolate reductase signature 93 107 4.4E-17 T 12-10-2018 N288_16345 a0531438ae7f0b9f12b2df5470013f28 165 PIRSF PIRSF000194 1 164 3.7E-63 T 12-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 N288_16345 a0531438ae7f0b9f12b2df5470013f28 165 SUPERFAMILY SSF53597 2 162 3.14E-63 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 N288_18325 4643c0a50fdc359988b3163e2c21edbd 240 Gene3D G3DSA:3.40.50.150 2 163 1.2E-54 T 12-10-2018 N288_18325 4643c0a50fdc359988b3163e2c21edbd 240 SUPERFAMILY SSF53335 8 138 3.02E-6 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_18325 4643c0a50fdc359988b3163e2c21edbd 240 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 23 232 6.9E-73 T 12-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 N288_18325 4643c0a50fdc359988b3163e2c21edbd 240 PIRSF PIRSF018637 4 238 9.6E-85 T 12-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 N288_00755 07035b1b2dbbea2d7958f4d01c469c4c 94 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 94 20.987 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 N288_00755 07035b1b2dbbea2d7958f4d01c469c4c 94 Gene3D G3DSA:3.30.70.330 1 94 1.4E-31 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily N288_00755 07035b1b2dbbea2d7958f4d01c469c4c 94 ProSitePatterns PS00050 Ribosomal protein L23 signature. 76 91 - T 12-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00755 07035b1b2dbbea2d7958f4d01c469c4c 94 SUPERFAMILY SSF54189 1 91 8.27E-31 T 12-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00755 07035b1b2dbbea2d7958f4d01c469c4c 94 Pfam PF00276 Ribosomal protein L23 5 87 3.8E-32 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 N288_12775 8419d1e92d5c902e08939f0e304e5c11 200 TIGRFAM TIGR02357 ECF_ThiT_YuaJ: energy-coupled thiamine transporter ThiT 7 186 3.0E-56 T 12-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 N288_12775 8419d1e92d5c902e08939f0e304e5c11 200 Pfam PF09515 Thiamine transporter protein (Thia_YuaJ) 9 184 6.4E-65 T 12-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 N288_12775 8419d1e92d5c902e08939f0e304e5c11 200 Gene3D G3DSA:1.10.1760.20 7 188 4.5E-53 T 12-10-2018 N288_14995 d0a3845b2ca95c19aa280c3545a863a8 255 Gene3D G3DSA:3.20.20.150 1 253 6.5E-76 T 12-10-2018 N288_14995 d0a3845b2ca95c19aa280c3545a863a8 255 Pfam PF01261 Xylose isomerase-like TIM barrel 25 205 1.1E-18 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain N288_14995 d0a3845b2ca95c19aa280c3545a863a8 255 SUPERFAMILY SSF51658 5 250 4.28E-46 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily N288_12740 d3b73574f5a246faaf2738684a744aee 547 Pfam PF08264 Anticodon-binding domain of tRNA 417 511 1.6E-9 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 N288_12740 d3b73574f5a246faaf2738684a744aee 547 SUPERFAMILY SSF47323 381 529 4.11E-35 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_12740 d3b73574f5a246faaf2738684a744aee 547 Gene3D G3DSA:3.40.50.620 3 375 3.8E-141 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_12740 d3b73574f5a246faaf2738684a744aee 547 SUPERFAMILY SSF57770 137 170 1.06E-7 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 N288_12740 d3b73574f5a246faaf2738684a744aee 547 Hamap MF_00098 Methionine--tRNA ligase [metG]. 1 540 37.263 T 12-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 N288_12740 d3b73574f5a246faaf2738684a744aee 547 SUPERFAMILY SSF52374 5 380 1.05E-87 T 12-10-2018 N288_12740 d3b73574f5a246faaf2738684a744aee 547 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_12740 d3b73574f5a246faaf2738684a744aee 547 PRINTS PR01041 Methionyl-tRNA synthetase signature 287 302 2.9E-20 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 N288_12740 d3b73574f5a246faaf2738684a744aee 547 PRINTS PR01041 Methionyl-tRNA synthetase signature 37 51 2.9E-20 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 N288_12740 d3b73574f5a246faaf2738684a744aee 547 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 2.9E-20 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 N288_12740 d3b73574f5a246faaf2738684a744aee 547 PRINTS PR01041 Methionyl-tRNA synthetase signature 5 18 2.9E-20 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 N288_12740 d3b73574f5a246faaf2738684a744aee 547 PRINTS PR01041 Methionyl-tRNA synthetase signature 85 96 2.9E-20 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 N288_12740 d3b73574f5a246faaf2738684a744aee 547 PRINTS PR01041 Methionyl-tRNA synthetase signature 380 391 2.9E-20 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 N288_12740 d3b73574f5a246faaf2738684a744aee 547 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 4 530 1.8E-153 T 12-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 N288_12740 d3b73574f5a246faaf2738684a744aee 547 Gene3D G3DSA:1.10.730.10 376 533 5.8E-42 T 12-10-2018 N288_12740 d3b73574f5a246faaf2738684a744aee 547 Gene3D G3DSA:2.20.28.20 137 170 3.8E-141 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 N288_12740 d3b73574f5a246faaf2738684a744aee 547 Pfam PF09334 tRNA synthetases class I (M) 4 392 1.4E-134 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_02665 476b6df50835e4f287f6f4dc2126de57 140 Gene3D G3DSA:3.10.180.10 9 140 1.8E-36 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_02665 476b6df50835e4f287f6f4dc2126de57 140 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 16 126 9.0E-10 T 12-10-2018 N288_02665 476b6df50835e4f287f6f4dc2126de57 140 SUPERFAMILY SSF54593 13 140 2.75E-22 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_21815 705dc4e9fb7b74debe73f781bc6f129a 403 Gene3D G3DSA:3.30.70.360 177 294 9.7E-134 T 12-10-2018 N288_21815 705dc4e9fb7b74debe73f781bc6f129a 403 Gene3D G3DSA:3.40.630.10 29 372 9.7E-134 T 12-10-2018 N288_21815 705dc4e9fb7b74debe73f781bc6f129a 403 SUPERFAMILY SSF53187 13 387 7.61E-59 T 12-10-2018 N288_21815 705dc4e9fb7b74debe73f781bc6f129a 403 PIRSF PIRSF037226 5 403 8.2E-168 T 12-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted N288_21815 705dc4e9fb7b74debe73f781bc6f129a 403 SUPERFAMILY SSF55031 181 282 2.36E-23 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_21815 705dc4e9fb7b74debe73f781bc6f129a 403 Pfam PF01546 Peptidase family M20/M25/M40 91 377 4.2E-10 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_21815 705dc4e9fb7b74debe73f781bc6f129a 403 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 28 347 5.8E-67 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 N288_21815 705dc4e9fb7b74debe73f781bc6f129a 403 Pfam PF07687 Peptidase dimerisation domain 186 274 1.2E-8 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain N288_01285 76e782ddedd43a43657e788eaba41fde 353 Gene3D G3DSA:1.10.3470.10 11 352 3.4E-105 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_01285 76e782ddedd43a43657e788eaba41fde 353 SUPERFAMILY SSF81345 10 346 2.22E-83 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_01285 76e782ddedd43a43657e788eaba41fde 353 Pfam PF01032 FecCD transport family 25 346 3.1E-95 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 N288_22370 7544d8f5e570ec83d7b4c049ccd71128 318 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 46 70 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 N288_22370 7544d8f5e570ec83d7b4c049ccd71128 318 SUPERFAMILY SSF53613 15 315 6.08E-76 T 12-10-2018 IPR029056 Ribokinase-like N288_22370 7544d8f5e570ec83d7b4c049ccd71128 318 Gene3D G3DSA:3.40.1190.20 4 313 1.1E-74 T 12-10-2018 IPR029056 Ribokinase-like N288_22370 7544d8f5e570ec83d7b4c049ccd71128 318 Pfam PF00294 pfkB family carbohydrate kinase 16 304 3.0E-54 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB N288_22370 7544d8f5e570ec83d7b4c049ccd71128 318 PRINTS PR00990 Ribokinase signature 41 60 4.8E-7 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 N288_22370 7544d8f5e570ec83d7b4c049ccd71128 318 PRINTS PR00990 Ribokinase signature 231 242 4.8E-7 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 N288_22370 7544d8f5e570ec83d7b4c049ccd71128 318 PRINTS PR00990 Ribokinase signature 192 207 4.8E-7 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 N288_19265 819c8ae2387b776cd91abb15e8356fe3 472 SUPERFAMILY SSF53732 1 464 1.31E-166 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 N288_19265 819c8ae2387b776cd91abb15e8356fe3 472 Pfam PF00330 Aconitase family (aconitate hydratase) 7 456 4.4E-156 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_19265 819c8ae2387b776cd91abb15e8356fe3 472 ProSitePatterns PS00450 Aconitase family signature 1. 338 354 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 N288_19265 819c8ae2387b776cd91abb15e8356fe3 472 Gene3D G3DSA:3.30.499.10 327 471 3.4E-49 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 N288_19265 819c8ae2387b776cd91abb15e8356fe3 472 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 465 58.912 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 N288_19265 819c8ae2387b776cd91abb15e8356fe3 472 PRINTS PR00415 Aconitase family signature 194 207 3.9E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_19265 819c8ae2387b776cd91abb15e8356fe3 472 PRINTS PR00415 Aconitase family signature 81 94 3.9E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_19265 819c8ae2387b776cd91abb15e8356fe3 472 PRINTS PR00415 Aconitase family signature 342 353 3.9E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_19265 819c8ae2387b776cd91abb15e8356fe3 472 PRINTS PR00415 Aconitase family signature 398 411 3.9E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_19265 819c8ae2387b776cd91abb15e8356fe3 472 PRINTS PR00415 Aconitase family signature 107 115 3.9E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_19265 819c8ae2387b776cd91abb15e8356fe3 472 PRINTS PR00415 Aconitase family signature 118 131 3.9E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_19265 819c8ae2387b776cd91abb15e8356fe3 472 PRINTS PR00415 Aconitase family signature 285 299 3.9E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_19265 819c8ae2387b776cd91abb15e8356fe3 472 PRINTS PR00415 Aconitase family signature 132 147 3.9E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_19265 819c8ae2387b776cd91abb15e8356fe3 472 PRINTS PR00415 Aconitase family signature 208 221 3.9E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_19265 819c8ae2387b776cd91abb15e8356fe3 472 Gene3D G3DSA:3.30.499.20 4 285 3.4E-102 T 12-10-2018 N288_19265 819c8ae2387b776cd91abb15e8356fe3 472 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 463 1.5E-239 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 N288_03275 d7e59a8c2674fa15d4f7c15ea1b95db3 628 SUPERFAMILY SSF48239 294 622 6.75E-89 T 12-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid N288_03275 d7e59a8c2674fa15d4f7c15ea1b95db3 628 TIGRFAM TIGR01507 hopene_cyclase: squalene-hopene cyclase 5 624 1.1E-134 T 12-10-2018 IPR006400 Squalene hopene cyclase GO:0016866|GO:0019746 KEGG: 00909+4.2.1.129+5.4.99.17|MetaCyc: PWY-6098|MetaCyc: PWY-7072 N288_03275 d7e59a8c2674fa15d4f7c15ea1b95db3 628 Gene3D G3DSA:1.50.10.20 13 620 2.5E-201 T 12-10-2018 N288_03275 d7e59a8c2674fa15d4f7c15ea1b95db3 628 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 8 294 1.4E-76 T 12-10-2018 IPR032697 Squalene cyclase, N-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 N288_03275 d7e59a8c2674fa15d4f7c15ea1b95db3 628 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 306 620 1.3E-93 T 12-10-2018 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 N288_03275 d7e59a8c2674fa15d4f7c15ea1b95db3 628 TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases 8 620 6.1E-125 T 12-10-2018 IPR018333 Squalene cyclase GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 N288_03275 d7e59a8c2674fa15d4f7c15ea1b95db3 628 Gene3D G3DSA:1.50.10.20 29 303 2.5E-201 T 12-10-2018 N288_03275 d7e59a8c2674fa15d4f7c15ea1b95db3 628 SUPERFAMILY SSF48239 35 298 1.29E-48 T 12-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid N288_06430 bc9dbd8a00f627bd6c824cc96e1a7fef 206 SUPERFAMILY SSF55469 7 202 2.09E-50 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 N288_06430 bc9dbd8a00f627bd6c824cc96e1a7fef 206 Gene3D G3DSA:3.40.109.10 1 206 2.1E-51 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 N288_06430 bc9dbd8a00f627bd6c824cc96e1a7fef 206 Pfam PF00881 Nitroreductase family 13 186 3.4E-33 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 N288_24175 024db6aab5ca694b00d056d5f43a90b6 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 2.2E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_24175 024db6aab5ca694b00d056d5f43a90b6 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 2.2E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_24175 024db6aab5ca694b00d056d5f43a90b6 217 SUPERFAMILY SSF48498 101 214 5.93E-13 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily N288_24175 024db6aab5ca694b00d056d5f43a90b6 217 SUPERFAMILY SSF46689 20 82 4.77E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_24175 024db6aab5ca694b00d056d5f43a90b6 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 4.2E-17 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_24175 024db6aab5ca694b00d056d5f43a90b6 217 Gene3D G3DSA:1.10.357.10 15 215 5.5E-40 T 12-10-2018 N288_07000 b7af5f7e9ed058b4111819fa84bda76f 348 SUPERFAMILY SSF51726 6 343 3.53E-104 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 N288_07000 b7af5f7e9ed058b4111819fa84bda76f 348 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 342 47.219 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 N288_07000 b7af5f7e9ed058b4111819fa84bda76f 348 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 N288_07000 b7af5f7e9ed058b4111819fa84bda76f 348 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 N288_07000 b7af5f7e9ed058b4111819fa84bda76f 348 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 341 4.2E-124 T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 N288_07000 b7af5f7e9ed058b4111819fa84bda76f 348 Gene3D G3DSA:3.20.20.210 1 347 3.9E-146 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 N288_07000 b7af5f7e9ed058b4111819fa84bda76f 348 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 8 339 1.5E-125 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 N288_01540 977379a5f729d7c38900d00d2f293e26 336 ProDom PD685490 RSBU REGULATOR SIGMA REGULATION FACTOR B PHOSPHATASE SIGMAB INDIRECT SIGMA-B 5 91 6.0E-28 T 12-10-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 N288_01540 977379a5f729d7c38900d00d2f293e26 336 Pfam PF08673 Phosphoserine phosphatase RsbU, N-terminal domain 10 83 2.2E-31 T 12-10-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 N288_01540 977379a5f729d7c38900d00d2f293e26 336 SUPERFAMILY SSF101215 2 84 1.44E-27 T 12-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 N288_01540 977379a5f729d7c38900d00d2f293e26 336 SUPERFAMILY SSF81606 124 333 3.79E-11 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_01540 977379a5f729d7c38900d00d2f293e26 336 SMART SM00331 119 334 5.5E-63 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_01540 977379a5f729d7c38900d00d2f293e26 336 Gene3D G3DSA:3.60.40.10 86 336 1.0E-54 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_01540 977379a5f729d7c38900d00d2f293e26 336 SMART SM00332 117 332 0.0058 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_01540 977379a5f729d7c38900d00d2f293e26 336 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 147 334 7.8E-51 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_01540 977379a5f729d7c38900d00d2f293e26 336 Gene3D G3DSA:1.10.1240.30 1 84 3.8E-32 T 12-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 N288_16775 910016cb28e2aec663f3dd0138de03f6 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 289 8.6E-11 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_16775 910016cb28e2aec663f3dd0138de03f6 300 SUPERFAMILY SSF161098 80 279 3.92E-9 T 12-10-2018 IPR035906 MetI-like superfamily N288_25135 12d9e8fd0eb74ed628c9d0ff37cf30b0 307 Gene3D G3DSA:1.20.1260.10 1 118 1.7E-10 T 12-10-2018 IPR012347 Ferritin-like N288_25135 12d9e8fd0eb74ed628c9d0ff37cf30b0 307 Gene3D G3DSA:1.20.1260.10 145 289 8.1E-6 T 12-10-2018 IPR012347 Ferritin-like N288_25135 12d9e8fd0eb74ed628c9d0ff37cf30b0 307 Pfam PF11553 Protein of unknown function (DUF3231) 140 301 7.5E-56 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_25135 12d9e8fd0eb74ed628c9d0ff37cf30b0 307 Pfam PF11553 Protein of unknown function (DUF3231) 2 132 2.0E-36 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_15610 b82bbcc8b949c15a98caf3bfbf7aa665 209 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 201 39.983 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 N288_15610 b82bbcc8b949c15a98caf3bfbf7aa665 209 Gene3D G3DSA:3.20.20.70 1 201 5.8E-68 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_15610 b82bbcc8b949c15a98caf3bfbf7aa665 209 SUPERFAMILY SSF51366 1 199 1.88E-57 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 N288_15610 b82bbcc8b949c15a98caf3bfbf7aa665 209 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 3 195 8.9E-48 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 N288_08970 0446e84e8b8e255c58314cc1f3dac7b2 84 TIGRFAM TIGR02908 CoxD_Bacillus: cytochrome c oxidase, subunit IVB 2 84 4.7E-40 T 12-10-2018 IPR014257 Cytochrome c oxidase, subunit IV bacillaceae KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 N288_08970 0446e84e8b8e255c58314cc1f3dac7b2 84 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 3 75 1.6E-15 T 12-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 N288_15780 fcc65a6799c3ee18f7a0817e3c914264 278 Pfam PF01739 CheR methyltransferase, SAM binding domain 80 258 4.2E-42 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal N288_15780 fcc65a6799c3ee18f7a0817e3c914264 278 SUPERFAMILY SSF47757 13 76 1.29E-5 T 12-10-2018 N288_15780 fcc65a6799c3ee18f7a0817e3c914264 278 PRINTS PR00996 Glutamate methyltransferase family signature 72 84 2.1E-29 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_15780 fcc65a6799c3ee18f7a0817e3c914264 278 PRINTS PR00996 Glutamate methyltransferase family signature 35 48 2.1E-29 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_15780 fcc65a6799c3ee18f7a0817e3c914264 278 PRINTS PR00996 Glutamate methyltransferase family signature 214 228 2.1E-29 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_15780 fcc65a6799c3ee18f7a0817e3c914264 278 PRINTS PR00996 Glutamate methyltransferase family signature 108 128 2.1E-29 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_15780 fcc65a6799c3ee18f7a0817e3c914264 278 PRINTS PR00996 Glutamate methyltransferase family signature 233 256 2.1E-29 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_15780 fcc65a6799c3ee18f7a0817e3c914264 278 PRINTS PR00996 Glutamate methyltransferase family signature 140 156 2.1E-29 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_15780 fcc65a6799c3ee18f7a0817e3c914264 278 SMART SM00138 13 276 3.2E-32 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 N288_15780 fcc65a6799c3ee18f7a0817e3c914264 278 SUPERFAMILY SSF53335 80 256 1.69E-43 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_15780 fcc65a6799c3ee18f7a0817e3c914264 278 Pfam PF03705 CheR methyltransferase, all-alpha domain 15 62 1.9E-9 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal N288_15780 fcc65a6799c3ee18f7a0817e3c914264 278 Gene3D G3DSA:3.40.50.150 78 278 1.4E-57 T 12-10-2018 N288_15320 cf638c54f09cf73b4cce735377c57867 68 SUPERFAMILY SSF55008 1 68 2.75E-22 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 N288_15320 cf638c54f09cf73b4cce735377c57867 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 N288_15320 cf638c54f09cf73b4cce735377c57867 68 Gene3D G3DSA:3.30.70.100 1 67 3.9E-26 T 12-10-2018 N288_15320 cf638c54f09cf73b4cce735377c57867 68 Pfam PF00403 Heavy-metal-associated domain 5 66 2.1E-19 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 N288_15320 cf638c54f09cf73b4cce735377c57867 68 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 4 68 1.1E-27 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 N288_15320 cf638c54f09cf73b4cce735377c57867 68 PRINTS PR00944 Copper ion binding protein signature 54 67 2.4E-10 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 N288_15320 cf638c54f09cf73b4cce735377c57867 68 PRINTS PR00944 Copper ion binding protein signature 28 41 2.4E-10 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 N288_15320 cf638c54f09cf73b4cce735377c57867 68 PRINTS PR00944 Copper ion binding protein signature 3 15 2.4E-10 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 N288_15320 cf638c54f09cf73b4cce735377c57867 68 PRINTS PR00944 Copper ion binding protein signature 15 28 2.4E-10 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 N288_19150 c9066465227faba287cb78587fd3cc27 571 SMART SM00065 250 395 4.0E-4 T 12-10-2018 IPR003018 GAF domain GO:0005515 N288_19150 c9066465227faba287cb78587fd3cc27 571 SUPERFAMILY SSF55073 403 567 8.63E-41 T 12-10-2018 IPR029787 Nucleotide cyclase N288_19150 c9066465227faba287cb78587fd3cc27 571 Gene3D G3DSA:3.30.450.40 227 401 1.2E-24 T 12-10-2018 IPR029016 GAF-like domain superfamily N288_19150 c9066465227faba287cb78587fd3cc27 571 SMART SM00267 387 569 1.8E-48 T 12-10-2018 IPR000160 GGDEF domain N288_19150 c9066465227faba287cb78587fd3cc27 571 Pfam PF13185 GAF domain 251 386 1.3E-10 T 12-10-2018 IPR003018 GAF domain GO:0005515 N288_19150 c9066465227faba287cb78587fd3cc27 571 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 400 567 8.2E-40 T 12-10-2018 IPR000160 GGDEF domain N288_19150 c9066465227faba287cb78587fd3cc27 571 Pfam PF00990 Diguanylate cyclase, GGDEF domain 402 565 8.6E-39 T 12-10-2018 IPR000160 GGDEF domain N288_19150 c9066465227faba287cb78587fd3cc27 571 Gene3D G3DSA:3.30.70.270 402 570 5.8E-48 T 12-10-2018 N288_19150 c9066465227faba287cb78587fd3cc27 571 SUPERFAMILY SSF55781 230 393 6.54E-20 T 12-10-2018 N288_18260 e47ce56104c598f8ba2a3b6230583165 371 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 7 347 4.0E-132 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 N288_18260 e47ce56104c598f8ba2a3b6230583165 371 Pfam PF04551 GcpE protein 10 351 5.2E-140 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 N288_18260 e47ce56104c598f8ba2a3b6230583165 371 Gene3D G3DSA:3.30.413.10 261 360 1.9E-35 T 12-10-2018 N288_18260 e47ce56104c598f8ba2a3b6230583165 371 Gene3D G3DSA:3.20.20.20 1 259 2.0E-110 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_18260 e47ce56104c598f8ba2a3b6230583165 371 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 5 355 34.996 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 N288_18260 e47ce56104c598f8ba2a3b6230583165 371 SUPERFAMILY SSF51717 15 214 1.88E-17 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_18260 e47ce56104c598f8ba2a3b6230583165 371 SUPERFAMILY SSF56014 263 351 6.4E-14 T 12-10-2018 N288_18260 e47ce56104c598f8ba2a3b6230583165 371 PIRSF PIRSF004640 1 361 2.4E-156 T 12-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 N288_11590 f816541fee37cae41d29fc4f400efa3b 233 Pfam PF04239 Protein of unknown function (DUF421) 81 196 6.4E-30 T 12-10-2018 IPR007353 Protein of unknown function DUF421 N288_11590 f816541fee37cae41d29fc4f400efa3b 233 Gene3D G3DSA:3.30.240.20 161 220 5.0E-13 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily N288_11590 f816541fee37cae41d29fc4f400efa3b 233 Gene3D G3DSA:3.30.240.20 77 147 1.2E-19 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily N288_01315 a68f46c003da6af9b14c86f82d5f148b 263 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 9 248 8.1E-40 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 N288_01315 a68f46c003da6af9b14c86f82d5f148b 263 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 263 37.82 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 N288_01315 a68f46c003da6af9b14c86f82d5f148b 263 Pfam PF02654 Cobalamin-5-phosphate synthase 11 250 5.8E-49 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 N288_00790 f8cf9125b55f2a102751f31da9d5adb6 87 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 82 24.27 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00790 f8cf9125b55f2a102751f31da9d5adb6 87 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 78 1.7E-35 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00790 f8cf9125b55f2a102751f31da9d5adb6 87 SUPERFAMILY SSF50249 7 84 1.59E-31 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_00790 f8cf9125b55f2a102751f31da9d5adb6 87 Pfam PF00366 Ribosomal protein S17 12 79 1.6E-32 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00790 f8cf9125b55f2a102751f31da9d5adb6 87 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 1.3E-11 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00790 f8cf9125b55f2a102751f31da9d5adb6 87 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 1.3E-11 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00790 f8cf9125b55f2a102751f31da9d5adb6 87 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 1.3E-11 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00790 f8cf9125b55f2a102751f31da9d5adb6 87 ProSitePatterns PS00056 Ribosomal protein S17 signature. 58 70 - T 12-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00790 f8cf9125b55f2a102751f31da9d5adb6 87 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 78 1.0E-32 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00790 f8cf9125b55f2a102751f31da9d5adb6 87 Gene3D G3DSA:2.40.50.140 6 86 6.4E-36 T 12-10-2018 N288_18645 b1599068af01610aad34cbd795140f4a 46 Pfam PF09501 Probable sporulation protein (Bac_small_yrzI) 1 44 8.0E-21 T 12-10-2018 IPR012655 Uncharacterised protein YrzI N288_18645 b1599068af01610aad34cbd795140f4a 46 TIGRFAM TIGR02413 Bac_small_yrzI: Bacillus tandem small hypothetical protein 1 43 4.6E-13 T 12-10-2018 IPR012655 Uncharacterised protein YrzI N288_20355 f8613f3c65bbc1d5eb6615b9aa54a97b 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.4E-40 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 N288_20355 f8613f3c65bbc1d5eb6615b9aa54a97b 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.4E-40 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 N288_20355 f8613f3c65bbc1d5eb6615b9aa54a97b 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 78 96 1.4E-40 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 N288_20355 f8613f3c65bbc1d5eb6615b9aa54a97b 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 119 138 1.4E-40 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 N288_20355 f8613f3c65bbc1d5eb6615b9aa54a97b 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.4E-40 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 N288_20355 f8613f3c65bbc1d5eb6615b9aa54a97b 157 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 8 147 3.0E-75 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 N288_20355 f8613f3c65bbc1d5eb6615b9aa54a97b 157 PIRSF PIRSF006160 1 157 2.7E-62 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 N288_20355 f8613f3c65bbc1d5eb6615b9aa54a97b 157 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 157 33.456 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 N288_20355 f8613f3c65bbc1d5eb6615b9aa54a97b 157 Gene3D G3DSA:3.30.1360.80 1 157 7.0E-63 T 12-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 N288_20355 f8613f3c65bbc1d5eb6615b9aa54a97b 157 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 7.8E-52 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 N288_20355 f8613f3c65bbc1d5eb6615b9aa54a97b 157 SUPERFAMILY SSF63411 4 151 2.84E-60 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 N288_02210 883a5306a04cdc17d12b4caf96f64337 234 Gene3D G3DSA:1.20.120.530 84 225 9.4E-28 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal N288_02210 883a5306a04cdc17d12b4caf96f64337 234 Gene3D G3DSA:1.10.10.10 1 71 1.3E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_02210 883a5306a04cdc17d12b4caf96f64337 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 67 1.6E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_02210 883a5306a04cdc17d12b4caf96f64337 234 SUPERFAMILY SSF46785 4 72 6.93E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_02210 883a5306a04cdc17d12b4caf96f64337 234 SMART SM00895 93 218 1.3E-19 T 12-10-2018 IPR011711 GntR, C-terminal N288_02210 883a5306a04cdc17d12b4caf96f64337 234 SMART SM00345 9 68 3.8E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_02210 883a5306a04cdc17d12b4caf96f64337 234 Pfam PF07729 FCD domain 93 217 3.9E-24 T 12-10-2018 IPR011711 GntR, C-terminal N288_02210 883a5306a04cdc17d12b4caf96f64337 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 5.9E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_02210 883a5306a04cdc17d12b4caf96f64337 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 5.9E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_02210 883a5306a04cdc17d12b4caf96f64337 234 SUPERFAMILY SSF48008 91 223 1.36E-25 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal N288_08440 1c28fa74480f36446ca8dbe53b4fcfa5 497 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 392 495 6.2E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_08440 1c28fa74480f36446ca8dbe53b4fcfa5 497 Pfam PF00512 His Kinase A (phospho-acceptor) domain 286 345 7.1E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_08440 1c28fa74480f36446ca8dbe53b4fcfa5 497 SMART SM00387 391 497 2.6E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_08440 1c28fa74480f36446ca8dbe53b4fcfa5 497 SMART SM00388 284 349 2.4E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_08440 1c28fa74480f36446ca8dbe53b4fcfa5 497 SUPERFAMILY SSF55874 346 495 3.41E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_08440 1c28fa74480f36446ca8dbe53b4fcfa5 497 Gene3D G3DSA:3.30.450.20 45 225 1.3E-42 T 12-10-2018 N288_08440 1c28fa74480f36446ca8dbe53b4fcfa5 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 475 5.7E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_08440 1c28fa74480f36446ca8dbe53b4fcfa5 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 442 5.7E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_08440 1c28fa74480f36446ca8dbe53b4fcfa5 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 456 5.7E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_08440 1c28fa74480f36446ca8dbe53b4fcfa5 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 494 5.7E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_08440 1c28fa74480f36446ca8dbe53b4fcfa5 497 Gene3D G3DSA:3.30.450.20 73 172 1.3E-42 T 12-10-2018 N288_08440 1c28fa74480f36446ca8dbe53b4fcfa5 497 Gene3D G3DSA:3.30.565.10 349 497 5.5E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_08440 1c28fa74480f36446ca8dbe53b4fcfa5 497 SUPERFAMILY SSF47384 274 345 6.67E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_08440 1c28fa74480f36446ca8dbe53b4fcfa5 497 Gene3D G3DSA:1.10.287.130 287 346 1.4E-14 T 12-10-2018 N288_13920 9353b760cd1dca974021d5824c5fc56d 380 Gene3D G3DSA:3.40.50.1980 41 163 9.1E-31 T 12-10-2018 N288_13920 9353b760cd1dca974021d5824c5fc56d 380 PRINTS PR00690 Adhesin family signature 72 85 1.9E-5 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 N288_13920 9353b760cd1dca974021d5824c5fc56d 380 PRINTS PR00690 Adhesin family signature 41 59 1.9E-5 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 N288_13920 9353b760cd1dca974021d5824c5fc56d 380 PRINTS PR00690 Adhesin family signature 85 102 1.9E-5 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 N288_13920 9353b760cd1dca974021d5824c5fc56d 380 PRINTS PR00691 Adhesin B signature 41 62 3.9E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 N288_13920 9353b760cd1dca974021d5824c5fc56d 380 PRINTS PR00691 Adhesin B signature 85 104 3.9E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 N288_13920 9353b760cd1dca974021d5824c5fc56d 380 PRINTS PR00691 Adhesin B signature 66 84 3.9E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 N288_13920 9353b760cd1dca974021d5824c5fc56d 380 SUPERFAMILY SSF53807 40 379 1.57E-76 T 12-10-2018 N288_13920 9353b760cd1dca974021d5824c5fc56d 380 Pfam PF01297 Zinc-uptake complex component A periplasmic 44 377 1.6E-74 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 N288_13920 9353b760cd1dca974021d5824c5fc56d 380 Gene3D G3DSA:3.40.50.1980 268 380 3.6E-39 T 12-10-2018 N288_13920 9353b760cd1dca974021d5824c5fc56d 380 Gene3D G3DSA:3.40.50.1980 179 265 3.1E-19 T 12-10-2018 N288_20910 ba0dc9c169a2dbabb1cf3dee63f078b6 405 SUPERFAMILY SSF51905 5 343 3.46E-32 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_20910 ba0dc9c169a2dbabb1cf3dee63f078b6 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.2E-7 T 12-10-2018 N288_20910 ba0dc9c169a2dbabb1cf3dee63f078b6 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 1.2E-7 T 12-10-2018 N288_20910 ba0dc9c169a2dbabb1cf3dee63f078b6 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.2E-7 T 12-10-2018 N288_20910 ba0dc9c169a2dbabb1cf3dee63f078b6 405 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 325 6.9E-46 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 N288_20910 ba0dc9c169a2dbabb1cf3dee63f078b6 405 Gene3D G3DSA:3.50.50.100 1 405 8.5E-141 T 12-10-2018 N288_18040 1fc229638d1797e88e6ae202bbea93a4 103 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 1.2E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site N288_18040 1fc229638d1797e88e6ae202bbea93a4 103 SUPERFAMILY SSF54523 7 74 3.03E-15 T 12-10-2018 N288_18040 1fc229638d1797e88e6ae202bbea93a4 103 PRINTS PR00813 Bacterial general secretion pathway protein G signature 6 31 8.2E-9 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 N288_18040 1fc229638d1797e88e6ae202bbea93a4 103 PRINTS PR00813 Bacterial general secretion pathway protein G signature 42 60 8.2E-9 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 N288_18040 1fc229638d1797e88e6ae202bbea93a4 103 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 6.6E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site N288_18040 1fc229638d1797e88e6ae202bbea93a4 103 PIRSF PIRSF029928 1 100 1.2E-40 T 12-10-2018 IPR016940 ComG operon protein C GO:0030420 N288_18040 1fc229638d1797e88e6ae202bbea93a4 103 Gene3D G3DSA:3.30.700.10 7 102 1.3E-11 T 12-10-2018 N288_18040 1fc229638d1797e88e6ae202bbea93a4 103 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site N288_00875 d6039a249a389ccefff3cc94986bbdfc 129 Pfam PF00411 Ribosomal protein S11 19 128 1.9E-52 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 N288_00875 d6039a249a389ccefff3cc94986bbdfc 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 34.537 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 N288_00875 d6039a249a389ccefff3cc94986bbdfc 129 PIRSF PIRSF002131 1 129 6.5E-54 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 N288_00875 d6039a249a389ccefff3cc94986bbdfc 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 12-10-2018 IPR018102 Ribosomal S11, conserved site N288_00875 d6039a249a389ccefff3cc94986bbdfc 129 Gene3D G3DSA:3.30.420.80 1 129 1.4E-54 T 12-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 N288_00875 d6039a249a389ccefff3cc94986bbdfc 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 3.3E-59 T 12-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00875 d6039a249a389ccefff3cc94986bbdfc 129 SUPERFAMILY SSF53137 14 129 3.2E-50 T 12-10-2018 N288_12835 b8bd6f82430483fc74302a1574c0ebaf 446 PIRSF PIRSF006603 1 446 1.2E-130 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 N288_12835 b8bd6f82430483fc74302a1574c0ebaf 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 21 412 1.7E-73 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 N288_12835 b8bd6f82430483fc74302a1574c0ebaf 446 Pfam PF01554 MatE 241 402 1.6E-28 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 N288_12835 b8bd6f82430483fc74302a1574c0ebaf 446 Pfam PF01554 MatE 21 182 4.0E-34 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 N288_18835 dbf4be873af4d9379e44856fbfea32c2 731 Pfam PF13291 ACT domain 651 728 1.6E-22 T 12-10-2018 IPR002912 ACT domain N288_18835 dbf4be873af4d9379e44856fbfea32c2 731 SMART SM00954 240 350 2.3E-69 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 N288_18835 dbf4be873af4d9379e44856fbfea32c2 731 Pfam PF13328 HD domain 31 180 5.8E-53 T 12-10-2018 IPR003607 HD/PDEase domain N288_18835 dbf4be873af4d9379e44856fbfea32c2 731 Gene3D G3DSA:3.10.20.30 387 459 2.2E-32 T 12-10-2018 IPR012675 Beta-grasp domain superfamily N288_18835 dbf4be873af4d9379e44856fbfea32c2 731 Gene3D G3DSA:1.10.3210.10 1 196 3.5E-89 T 12-10-2018 N288_18835 dbf4be873af4d9379e44856fbfea32c2 731 SUPERFAMILY SSF109604 10 196 4.39E-76 T 12-10-2018 N288_18835 dbf4be873af4d9379e44856fbfea32c2 731 SUPERFAMILY SSF81301 185 398 4.09E-67 T 12-10-2018 N288_18835 dbf4be873af4d9379e44856fbfea32c2 731 SMART SM00471 46 158 6.6E-9 T 12-10-2018 IPR003607 HD/PDEase domain N288_18835 dbf4be873af4d9379e44856fbfea32c2 731 Gene3D G3DSA:3.30.70.260 651 731 2.1E-19 T 12-10-2018 N288_18835 dbf4be873af4d9379e44856fbfea32c2 731 SUPERFAMILY SSF81271 381 453 5.56E-23 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 N288_18835 dbf4be873af4d9379e44856fbfea32c2 731 Pfam PF04607 Region found in RelA / SpoT proteins 240 350 6.0E-40 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 N288_18835 dbf4be873af4d9379e44856fbfea32c2 731 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 31 728 3.3E-257 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 N288_18835 dbf4be873af4d9379e44856fbfea32c2 731 Gene3D G3DSA:3.30.460.10 198 330 3.5E-53 T 12-10-2018 N288_18835 dbf4be873af4d9379e44856fbfea32c2 731 SUPERFAMILY SSF55021 654 731 2.47E-13 T 12-10-2018 N288_18835 dbf4be873af4d9379e44856fbfea32c2 731 Pfam PF02824 TGS domain 394 453 3.8E-23 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 N288_12765 febdfadf4b81ab2f35f12fc3548f236d 267 Gene3D G3DSA:1.10.3720.10 6 265 5.9E-43 T 12-10-2018 IPR035906 MetI-like superfamily N288_12765 febdfadf4b81ab2f35f12fc3548f236d 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 259 1.5E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_12765 febdfadf4b81ab2f35f12fc3548f236d 267 SUPERFAMILY SSF161098 5 260 3.83E-47 T 12-10-2018 IPR035906 MetI-like superfamily N288_09905 dafa6b7602885e2ec11ff6aaa06fd3a1 568 PIRSF PIRSF001535 1 568 2.6E-263 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 N288_09905 dafa6b7602885e2ec11ff6aaa06fd3a1 568 Pfam PF03129 Anticodon binding domain 471 561 1.6E-18 T 12-10-2018 IPR004154 Anticodon-binding N288_09905 dafa6b7602885e2ec11ff6aaa06fd3a1 568 Gene3D G3DSA:3.30.930.10 11 461 8.2E-254 T 12-10-2018 N288_09905 dafa6b7602885e2ec11ff6aaa06fd3a1 568 Gene3D G3DSA:3.40.50.800 4 549 8.2E-254 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily N288_09905 dafa6b7602885e2ec11ff6aaa06fd3a1 568 SUPERFAMILY SSF52954 459 565 6.05E-29 T 12-10-2018 N288_09905 dafa6b7602885e2ec11ff6aaa06fd3a1 568 Pfam PF04073 Aminoacyl-tRNA editing domain 257 375 9.4E-29 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 N288_09905 dafa6b7602885e2ec11ff6aaa06fd3a1 568 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 455 2.0E-58 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_09905 dafa6b7602885e2ec11ff6aaa06fd3a1 568 SUPERFAMILY SSF55826 218 385 3.79E-34 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 N288_09905 dafa6b7602885e2ec11ff6aaa06fd3a1 568 SUPERFAMILY SSF55681 9 474 5.53E-103 T 12-10-2018 N288_09905 dafa6b7602885e2ec11ff6aaa06fd3a1 568 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 565 41.253 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 N288_09905 dafa6b7602885e2ec11ff6aaa06fd3a1 568 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 560 2.7E-239 T 12-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 N288_09905 dafa6b7602885e2ec11ff6aaa06fd3a1 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-17 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 N288_09905 dafa6b7602885e2ec11ff6aaa06fd3a1 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-17 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 N288_09905 dafa6b7602885e2ec11ff6aaa06fd3a1 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-17 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 N288_09905 dafa6b7602885e2ec11ff6aaa06fd3a1 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-17 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 N288_09905 dafa6b7602885e2ec11ff6aaa06fd3a1 568 Gene3D G3DSA:3.90.960.10 240 385 8.2E-254 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 N288_22075 7be0170269724fd41919c8fa6c74c77a 497 Pfam PF04851 Type III restriction enzyme, res subunit 148 296 1.5E-10 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 N288_22075 7be0170269724fd41919c8fa6c74c77a 497 SMART SM00490 368 452 2.2E-8 T 12-10-2018 IPR001650 Helicase, C-terminal N288_22075 7be0170269724fd41919c8fa6c74c77a 497 Gene3D G3DSA:3.40.50.300 334 469 1.5E-24 T 12-10-2018 N288_22075 7be0170269724fd41919c8fa6c74c77a 497 Gene3D G3DSA:3.40.50.300 148 307 1.2E-19 T 12-10-2018 N288_22075 7be0170269724fd41919c8fa6c74c77a 497 Pfam PF00271 Helicase conserved C-terminal domain 352 451 9.5E-10 T 12-10-2018 IPR001650 Helicase, C-terminal N288_22075 7be0170269724fd41919c8fa6c74c77a 497 SMART SM00487 145 327 2.3E-13 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_22075 7be0170269724fd41919c8fa6c74c77a 497 SUPERFAMILY SSF52540 163 462 3.93E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_03145 49ce0f5e87d17c161e84c0c3f45f58e2 340 SUPERFAMILY SSF69572 3 332 6.67E-82 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 N288_03145 49ce0f5e87d17c161e84c0c3f45f58e2 340 Pfam PF00899 ThiF family 5 242 1.0E-57 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 N288_03145 49ce0f5e87d17c161e84c0c3f45f58e2 340 Gene3D G3DSA:3.40.50.720 2 251 9.4E-72 T 12-10-2018 N288_04880 aad717afa9ba92524e18d055d323f571 433 Gene3D G3DSA:3.40.190.10 156 422 1.2E-109 T 12-10-2018 N288_04880 aad717afa9ba92524e18d055d323f571 433 SUPERFAMILY SSF53850 21 431 1.71E-74 T 12-10-2018 N288_04880 aad717afa9ba92524e18d055d323f571 433 Gene3D G3DSA:3.40.190.10 61 391 1.2E-109 T 12-10-2018 N288_04880 aad717afa9ba92524e18d055d323f571 433 Pfam PF01547 Bacterial extracellular solute-binding protein 61 345 2.1E-32 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein N288_01545 acb35f450e99ef890fcc2dd35d82eda7 110 Gene3D G3DSA:3.30.750.24 1 110 3.6E-28 T 12-10-2018 IPR036513 STAS domain superfamily N288_01545 acb35f450e99ef890fcc2dd35d82eda7 110 Pfam PF01740 STAS domain 5 100 2.4E-18 T 12-10-2018 IPR002645 STAS domain N288_01545 acb35f450e99ef890fcc2dd35d82eda7 110 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 106 1.2E-32 T 12-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 N288_01545 acb35f450e99ef890fcc2dd35d82eda7 110 SUPERFAMILY SSF52091 4 107 3.34E-25 T 12-10-2018 IPR036513 STAS domain superfamily N288_02085 736ad52c95f6fd8db1c3f8a3d5e2bc63 399 Pfam PF07690 Major Facilitator Superfamily 19 297 2.9E-39 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_02085 736ad52c95f6fd8db1c3f8a3d5e2bc63 399 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 83 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_02085 736ad52c95f6fd8db1c3f8a3d5e2bc63 399 SUPERFAMILY SSF103473 9 388 6.02E-59 T 12-10-2018 IPR036259 MFS transporter superfamily N288_02085 736ad52c95f6fd8db1c3f8a3d5e2bc63 399 ProSitePatterns PS00217 Sugar transport proteins signature 2. 109 134 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_02085 736ad52c95f6fd8db1c3f8a3d5e2bc63 399 Gene3D G3DSA:1.20.1250.20 8 382 5.5E-49 T 12-10-2018 N288_06880 fa56aa3ed8359074410bfa4dc8d7ef04 399 Gene3D G3DSA:3.40.630.10 17 374 1.8E-147 T 12-10-2018 N288_06880 fa56aa3ed8359074410bfa4dc8d7ef04 399 Gene3D G3DSA:3.30.70.360 183 297 1.8E-147 T 12-10-2018 N288_06880 fa56aa3ed8359074410bfa4dc8d7ef04 399 PIRSF PIRSF005962 1 392 6.1E-131 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 N288_06880 fa56aa3ed8359074410bfa4dc8d7ef04 399 Pfam PF07687 Peptidase dimerisation domain 187 279 6.9E-12 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain N288_06880 fa56aa3ed8359074410bfa4dc8d7ef04 399 SUPERFAMILY SSF55031 185 298 2.62E-31 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_06880 fa56aa3ed8359074410bfa4dc8d7ef04 399 Pfam PF01546 Peptidase family M20/M25/M40 74 384 1.0E-30 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_06880 fa56aa3ed8359074410bfa4dc8d7ef04 399 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 377 2.5E-125 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 N288_06880 fa56aa3ed8359074410bfa4dc8d7ef04 399 SUPERFAMILY SSF53187 4 388 4.19E-86 T 12-10-2018 N288_23905 4fbd077e0db40348634aa105d73c7740 176 SUPERFAMILY SSF53697 18 165 3.71E-6 T 12-10-2018 N288_23905 4fbd077e0db40348634aa105d73c7740 176 Pfam PF10740 Domain of unknown function (DUF2529) 2 172 4.1E-63 T 12-10-2018 IPR019676 Domain of unknown function (DUF2529) N288_23905 4fbd077e0db40348634aa105d73c7740 176 Gene3D G3DSA:3.40.50.10490 1 176 3.0E-56 T 12-10-2018 N288_01085 008c4dfe43fcaa5bc83319f32c4b1eb9 134 PIRSF PIRSF022536 1 134 1.3E-36 T 12-10-2018 IPR009207 Histone methyltransferase, PBCV type putative KEGG: 00310+2.1.1.43 N288_01085 008c4dfe43fcaa5bc83319f32c4b1eb9 134 Pfam PF00856 SET domain 24 118 1.4E-12 T 12-10-2018 IPR001214 SET domain GO:0005515 N288_01085 008c4dfe43fcaa5bc83319f32c4b1eb9 134 Gene3D G3DSA:2.170.270.10 4 121 2.9E-30 T 12-10-2018 N288_01085 008c4dfe43fcaa5bc83319f32c4b1eb9 134 SUPERFAMILY SSF82199 13 120 5.23E-22 T 12-10-2018 N288_01085 008c4dfe43fcaa5bc83319f32c4b1eb9 134 SMART SM00317 9 124 9.0E-8 T 12-10-2018 IPR001214 SET domain GO:0005515 N288_13905 4b0cbed4b4513e5dc13420464947c411 320 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_13905 4b0cbed4b4513e5dc13420464947c411 320 Gene3D G3DSA:1.10.1740.10 10 92 3.8E-20 T 12-10-2018 N288_13905 4b0cbed4b4513e5dc13420464947c411 320 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 169 1.9E-21 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_13905 4b0cbed4b4513e5dc13420464947c411 320 Pfam PF04542 Sigma-70 region 2 25 90 8.3E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_13905 4b0cbed4b4513e5dc13420464947c411 320 SUPERFAMILY SSF54427 185 298 5.98E-8 T 12-10-2018 IPR032710 NTF2-like domain superfamily N288_13905 4b0cbed4b4513e5dc13420464947c411 320 SUPERFAMILY SSF88946 20 99 5.49E-19 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_13905 4b0cbed4b4513e5dc13420464947c411 320 Gene3D G3DSA:1.10.10.10 110 174 1.1E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_13905 4b0cbed4b4513e5dc13420464947c411 320 Pfam PF08281 Sigma-70, region 4 119 166 3.3E-10 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_13905 4b0cbed4b4513e5dc13420464947c411 320 SUPERFAMILY SSF88659 107 168 5.42E-10 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_23740 6c3736248e768d36d9d2a869d46dcb9a 746 Pfam PF02225 PA domain 342 406 5.4E-16 T 12-10-2018 IPR003137 PA domain N288_23740 6c3736248e768d36d9d2a869d46dcb9a 746 PRINTS PR00723 Subtilisin serine protease family (S8) signature 177 190 2.3E-21 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_23740 6c3736248e768d36d9d2a869d46dcb9a 746 PRINTS PR00723 Subtilisin serine protease family (S8) signature 132 151 2.3E-21 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_23740 6c3736248e768d36d9d2a869d46dcb9a 746 PRINTS PR00723 Subtilisin serine protease family (S8) signature 466 482 2.3E-21 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_23740 6c3736248e768d36d9d2a869d46dcb9a 746 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 137 148 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site N288_23740 6c3736248e768d36d9d2a869d46dcb9a 746 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 181 191 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site N288_23740 6c3736248e768d36d9d2a869d46dcb9a 746 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 467 477 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site N288_23740 6c3736248e768d36d9d2a869d46dcb9a 746 SUPERFAMILY SSF52743 129 531 3.93E-85 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 N288_23740 6c3736248e768d36d9d2a869d46dcb9a 746 Pfam PF00082 Subtilase family 132 521 3.1E-71 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 N288_23740 6c3736248e768d36d9d2a869d46dcb9a 746 SUPERFAMILY SSF52025 324 410 4.84E-15 T 12-10-2018 N288_23740 6c3736248e768d36d9d2a869d46dcb9a 746 Gene3D G3DSA:3.50.30.30 306 430 9.2E-31 T 12-10-2018 N288_10820 b94ae72a8432b936602bf216a2131da0 336 Pfam PF04294 VanW like protein 195 322 4.2E-44 T 12-10-2018 IPR007391 Vancomycin resistance VanW N288_02545 0ec544d36810661c4aa92c2a9b245001 167 Gene3D G3DSA:3.30.530.20 1 166 3.2E-38 T 12-10-2018 IPR023393 START-like domain superfamily N288_02545 0ec544d36810661c4aa92c2a9b245001 167 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 16 163 1.1E-17 T 12-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like N288_02545 0ec544d36810661c4aa92c2a9b245001 167 SUPERFAMILY SSF55961 4 163 7.15E-31 T 12-10-2018 N288_23500 2397441e6abf4f60495fc51d2b058e53 1298 Pfam PF00082 Subtilase family 185 639 6.3E-59 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 N288_23500 2397441e6abf4f60495fc51d2b058e53 1298 Pfam PF06280 Fn3-like domain 674 809 1.7E-34 T 12-10-2018 IPR010435 Fn3-like domain GO:0004252|GO:0005618|GO:0016020 N288_23500 2397441e6abf4f60495fc51d2b058e53 1298 SUPERFAMILY SSF52743 167 658 6.68E-61 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 N288_23500 2397441e6abf4f60495fc51d2b058e53 1298 PRINTS PR00723 Subtilisin serine protease family (S8) signature 185 204 1.8E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_23500 2397441e6abf4f60495fc51d2b058e53 1298 PRINTS PR00723 Subtilisin serine protease family (S8) signature 580 596 1.8E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_23500 2397441e6abf4f60495fc51d2b058e53 1298 PRINTS PR00723 Subtilisin serine protease family (S8) signature 256 269 1.8E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_23500 2397441e6abf4f60495fc51d2b058e53 1298 Gene3D G3DSA:3.40.50.200 184 654 2.0E-161 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 N288_23500 2397441e6abf4f60495fc51d2b058e53 1298 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 581 591 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site N288_23500 2397441e6abf4f60495fc51d2b058e53 1298 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 190 201 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site N288_23500 2397441e6abf4f60495fc51d2b058e53 1298 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 260 270 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site N288_23500 2397441e6abf4f60495fc51d2b058e53 1298 Gene3D G3DSA:2.60.40.10 1061 1151 7.1E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_23500 2397441e6abf4f60495fc51d2b058e53 1298 Pfam PF02225 PA domain 441 513 7.5E-13 T 12-10-2018 IPR003137 PA domain N288_23500 2397441e6abf4f60495fc51d2b058e53 1298 Gene3D G3DSA:3.50.30.30 399 581 2.0E-161 T 12-10-2018 N288_23500 2397441e6abf4f60495fc51d2b058e53 1298 Gene3D G3DSA:2.60.40.1710 663 818 5.6E-36 T 12-10-2018 N288_23500 2397441e6abf4f60495fc51d2b058e53 1298 SUPERFAMILY SSF52025 432 529 3.66E-13 T 12-10-2018 N288_23895 ffde2898c1446e99135ab6cbadc100a9 124 SMART SM00448 3 114 1.1E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_23895 ffde2898c1446e99135ab6cbadc100a9 124 Pfam PF00072 Response regulator receiver domain 5 115 1.4E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_23895 ffde2898c1446e99135ab6cbadc100a9 124 SUPERFAMILY SSF52172 4 118 7.54E-38 T 12-10-2018 IPR011006 CheY-like superfamily N288_23895 ffde2898c1446e99135ab6cbadc100a9 124 Gene3D G3DSA:3.40.50.2300 1 122 6.8E-43 T 12-10-2018 N288_23660 22a0fc1c155f08132e1610f883015ad4 139 SUPERFAMILY SSF54862 24 126 1.93E-24 T 12-10-2018 N288_23660 22a0fc1c155f08132e1610f883015ad4 139 Gene3D G3DSA:3.30.70.3270 24 139 9.1E-33 T 12-10-2018 N288_23660 22a0fc1c155f08132e1610f883015ad4 139 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 135 22.66 T 12-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23660 22a0fc1c155f08132e1610f883015ad4 139 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site N288_23660 22a0fc1c155f08132e1610f883015ad4 139 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 7 122 5.8E-35 T 12-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23660 22a0fc1c155f08132e1610f883015ad4 139 Pfam PF12838 4Fe-4S dicluster domain 45 102 2.3E-10 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain N288_05305 2c950aa82e29fa2d219b84273312f161 242 Gene3D G3DSA:1.10.10.10 3 77 5.3E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_05305 2c950aa82e29fa2d219b84273312f161 242 Pfam PF07729 FCD domain 103 227 7.5E-25 T 12-10-2018 IPR011711 GntR, C-terminal N288_05305 2c950aa82e29fa2d219b84273312f161 242 SMART SM00345 18 77 1.7E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_05305 2c950aa82e29fa2d219b84273312f161 242 Gene3D G3DSA:1.20.120.530 97 241 6.3E-31 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal N288_05305 2c950aa82e29fa2d219b84273312f161 242 SUPERFAMILY SSF48008 99 237 5.75E-29 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal N288_05305 2c950aa82e29fa2d219b84273312f161 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 3.5E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_05305 2c950aa82e29fa2d219b84273312f161 242 SMART SM00895 102 228 5.7E-23 T 12-10-2018 IPR011711 GntR, C-terminal N288_05305 2c950aa82e29fa2d219b84273312f161 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 3.6E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_05305 2c950aa82e29fa2d219b84273312f161 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 3.6E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_05305 2c950aa82e29fa2d219b84273312f161 242 SUPERFAMILY SSF46785 8 81 4.42E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_15250 06d11d406b3789a9e28895f271348efa 433 Gene3D G3DSA:1.20.5.340 10 127 1.5E-6 T 12-10-2018 N288_15250 06d11d406b3789a9e28895f271348efa 433 Gene3D G3DSA:3.90.1720.10 236 430 2.2E-41 T 12-10-2018 N288_15250 06d11d406b3789a9e28895f271348efa 433 Pfam PF00877 NlpC/P60 family 323 427 3.7E-26 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain N288_15250 06d11d406b3789a9e28895f271348efa 433 SUPERFAMILY SSF54001 302 427 6.38E-32 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily N288_05900 e6b2b693b14ceb2b46f7578fb4721b85 275 SUPERFAMILY SSF161098 7 275 5.61E-66 T 12-10-2018 IPR035906 MetI-like superfamily N288_05900 e6b2b693b14ceb2b46f7578fb4721b85 275 Gene3D G3DSA:1.10.3720.10 2 263 4.0E-56 T 12-10-2018 IPR035906 MetI-like superfamily N288_05900 e6b2b693b14ceb2b46f7578fb4721b85 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 269 1.2E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_16015 0de7c792610e8aba3b4cadc7cc0af642 368 SUPERFAMILY SSF82861 91 176 1.83E-11 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 N288_16015 0de7c792610e8aba3b4cadc7cc0af642 368 Gene3D G3DSA:2.30.30.60 193 242 8.1E-15 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily N288_16015 0de7c792610e8aba3b4cadc7cc0af642 368 Pfam PF00924 Mechanosensitive ion channel 135 337 8.5E-63 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 N288_16015 0de7c792610e8aba3b4cadc7cc0af642 368 SUPERFAMILY SSF82689 245 348 1.07E-18 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 N288_16015 0de7c792610e8aba3b4cadc7cc0af642 368 Gene3D G3DSA:3.30.70.100 244 341 4.3E-18 T 12-10-2018 N288_16015 0de7c792610e8aba3b4cadc7cc0af642 368 SUPERFAMILY SSF50182 178 243 2.16E-19 T 12-10-2018 IPR010920 LSM domain superfamily N288_15190 2e99db20813786a0fa7bca957448ab50 159 SUPERFAMILY SSF49764 56 151 1.95E-18 T 12-10-2018 IPR008978 HSP20-like chaperone N288_15190 2e99db20813786a0fa7bca957448ab50 159 Pfam PF00011 Hsp20/alpha crystallin family 62 155 7.8E-10 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain N288_15190 2e99db20813786a0fa7bca957448ab50 159 Gene3D G3DSA:2.60.40.790 34 159 3.6E-19 T 12-10-2018 IPR008978 HSP20-like chaperone N288_22765 1ded5129cfa8f25469824cf0ce66c117 283 SUPERFAMILY SSF53067 3 282 2.39E-50 T 12-10-2018 N288_22765 1ded5129cfa8f25469824cf0ce66c117 283 Gene3D G3DSA:3.30.420.40 103 283 6.2E-71 T 12-10-2018 N288_22765 1ded5129cfa8f25469824cf0ce66c117 283 Pfam PF00480 ROK family 3 282 1.4E-74 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 N288_22765 1ded5129cfa8f25469824cf0ce66c117 283 Gene3D G3DSA:3.30.420.40 1 102 1.7E-32 T 12-10-2018 N288_22765 1ded5129cfa8f25469824cf0ce66c117 283 ProSitePatterns PS01125 ROK family signature. 128 153 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 N288_02855 f221aa4b438d560b79a89de744d944f0 113 Pfam PF11345 Protein of unknown function (DUF3147) 23 103 4.0E-5 T 12-10-2018 IPR021493 Protein of unknown function DUF3147 N288_17785 67b615537c4deb80069393cf571bec93 428 SMART SM00228 111 187 3.0E-5 T 12-10-2018 IPR001478 PDZ domain GO:0005515 N288_17785 67b615537c4deb80069393cf571bec93 428 Pfam PF05580 SpoIVB peptidase S55 204 412 1.9E-85 T 12-10-2018 IPR008763 Peptidase S55, SpoIVB N288_17785 67b615537c4deb80069393cf571bec93 428 SUPERFAMILY SSF50494 326 411 9.64E-6 T 12-10-2018 IPR009003 Peptidase S1, PA clan N288_17785 67b615537c4deb80069393cf571bec93 428 Gene3D G3DSA:2.30.42.10 135 213 2.9E-14 T 12-10-2018 N288_17785 67b615537c4deb80069393cf571bec93 428 SUPERFAMILY SSF50156 136 197 8.28E-11 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 N288_17785 67b615537c4deb80069393cf571bec93 428 Pfam PF13180 PDZ domain 136 194 2.3E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 N288_17785 67b615537c4deb80069393cf571bec93 428 TIGRFAM TIGR02860 spore_IV_B: stage IV sporulation protein B 6 417 1.9E-173 T 12-10-2018 IPR014219 Peptidase S55, sporulation stage IV, protein B N288_03500 c86c16fb0ebcccf3f2d07bc5e892bf8f 165 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 27 139 1.7E-56 T 12-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 N288_03500 c86c16fb0ebcccf3f2d07bc5e892bf8f 165 Pfam PF14489 QueF-like protein 62 140 9.8E-36 T 12-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 N288_03500 c86c16fb0ebcccf3f2d07bc5e892bf8f 165 Gene3D G3DSA:3.30.1130.10 21 165 2.5E-69 T 12-10-2018 N288_03500 c86c16fb0ebcccf3f2d07bc5e892bf8f 165 PIRSF PIRSF027377 8 147 1.0E-62 T 12-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 N288_03500 c86c16fb0ebcccf3f2d07bc5e892bf8f 165 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 165 73.492 T 12-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 N288_03500 c86c16fb0ebcccf3f2d07bc5e892bf8f 165 SUPERFAMILY SSF55620 27 135 7.26E-29 T 12-10-2018 N288_18465 d49f46c4b91a06263779902f4785556f 450 SMART SM00729 143 361 2.9E-60 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 N288_18465 d49f46c4b91a06263779902f4785556f 450 Pfam PF00919 Uncharacterized protein family UPF0004 4 98 2.6E-26 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 N288_18465 d49f46c4b91a06263779902f4785556f 450 Pfam PF04055 Radical SAM superfamily 149 319 2.6E-29 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 N288_18465 d49f46c4b91a06263779902f4785556f 450 SUPERFAMILY SSF102114 124 364 4.58E-57 T 12-10-2018 N288_18465 d49f46c4b91a06263779902f4785556f 450 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 427 2.1E-149 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 N288_18465 d49f46c4b91a06263779902f4785556f 450 Pfam PF01938 TRAM domain 393 426 2.2E-4 T 12-10-2018 IPR002792 TRAM domain N288_18465 d49f46c4b91a06263779902f4785556f 450 Gene3D G3DSA:3.80.30.20 140 375 1.5E-86 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe N288_18465 d49f46c4b91a06263779902f4785556f 450 Gene3D G3DSA:3.40.50.12160 3 134 4.8E-25 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily N288_18465 d49f46c4b91a06263779902f4785556f 450 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 147 167 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 N288_18465 d49f46c4b91a06263779902f4785556f 450 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 423 6.4E-142 T 12-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 N288_09185 aff2e1bc8e869e07eead574c38f18309 324 Pfam PF00953 Glycosyl transferase family 4 83 248 8.9E-41 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 N288_09185 aff2e1bc8e869e07eead574c38f18309 324 ProSitePatterns PS01347 MraY family signature 1. 48 60 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_09185 aff2e1bc8e869e07eead574c38f18309 324 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 17 323 5.0E-125 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_09185 aff2e1bc8e869e07eead574c38f18309 324 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 5 322 25.101 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_09185 aff2e1bc8e869e07eead574c38f18309 324 ProSitePatterns PS01348 MraY family signature 2. 168 179 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_15160 c4258358adc456dc443efe0d1f06f6fd 172 Gene3D G3DSA:3.40.109.10 8 171 5.7E-34 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 N288_15160 c4258358adc456dc443efe0d1f06f6fd 172 Pfam PF00881 Nitroreductase family 68 151 1.3E-11 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 N288_15160 c4258358adc456dc443efe0d1f06f6fd 172 SUPERFAMILY SSF55469 9 168 3.4E-34 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 N288_07195 ffa73cefe0ce4ef323c7394e517566d7 502 Gene3D G3DSA:3.30.300.310 395 499 9.0E-33 T 12-10-2018 N288_07195 ffa73cefe0ce4ef323c7394e517566d7 502 Gene3D G3DSA:3.40.50.12780 3 392 8.4E-116 T 12-10-2018 N288_07195 ffa73cefe0ce4ef323c7394e517566d7 502 ProSitePatterns PS00455 Putative AMP-binding domain signature. 154 165 - T 12-10-2018 IPR020845 AMP-binding, conserved site N288_07195 ffa73cefe0ce4ef323c7394e517566d7 502 Pfam PF13193 AMP-binding enzyme C-terminal domain 408 483 2.0E-21 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain N288_07195 ffa73cefe0ce4ef323c7394e517566d7 502 SUPERFAMILY SSF56801 6 494 2.88E-150 T 12-10-2018 N288_07195 ffa73cefe0ce4ef323c7394e517566d7 502 Pfam PF00501 AMP-binding enzyme 11 399 1.7E-99 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 N288_10620 7ea1308782a29c8d9d3fdbb389e6b7fa 303 SUPERFAMILY SSF51905 3 297 3.32E-30 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_10620 7ea1308782a29c8d9d3fdbb389e6b7fa 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 1.9E-15 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_10620 7ea1308782a29c8d9d3fdbb389e6b7fa 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 124 136 1.9E-15 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_10620 7ea1308782a29c8d9d3fdbb389e6b7fa 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 102 110 1.9E-15 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_10620 7ea1308782a29c8d9d3fdbb389e6b7fa 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 257 275 1.9E-15 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_10620 7ea1308782a29c8d9d3fdbb389e6b7fa 303 Gene3D G3DSA:3.50.50.60 115 227 2.6E-87 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_10620 7ea1308782a29c8d9d3fdbb389e6b7fa 303 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 247 269 7.1E-15 T 12-10-2018 N288_10620 7ea1308782a29c8d9d3fdbb389e6b7fa 303 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 7.1E-15 T 12-10-2018 N288_10620 7ea1308782a29c8d9d3fdbb389e6b7fa 303 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 7.1E-15 T 12-10-2018 N288_10620 7ea1308782a29c8d9d3fdbb389e6b7fa 303 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 269 9.4E-25 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 N288_10620 7ea1308782a29c8d9d3fdbb389e6b7fa 303 Gene3D G3DSA:3.50.50.60 4 288 2.6E-87 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_10035 8d99fa67f51676d83b82ceef5f827ceb 557 Gene3D G3DSA:3.10.20.580 449 555 3.7E-38 T 12-10-2018 N288_10035 8d99fa67f51676d83b82ceef5f827ceb 557 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 9 553 2.2E-189 T 12-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 N288_10035 8d99fa67f51676d83b82ceef5f827ceb 557 Hamap MF_01491 Ribonuclease J [rnj]. 4 555 43.976 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 N288_10035 8d99fa67f51676d83b82ceef5f827ceb 557 PIRSF PIRSF004803 1 555 5.3E-209 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 N288_10035 8d99fa67f51676d83b82ceef5f827ceb 557 SMART SM00849 21 218 9.8E-26 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_10035 8d99fa67f51676d83b82ceef5f827ceb 557 Gene3D G3DSA:3.60.15.10 10 436 7.8E-162 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_10035 8d99fa67f51676d83b82ceef5f827ceb 557 SUPERFAMILY SSF56281 9 424 1.31E-82 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_10035 8d99fa67f51676d83b82ceef5f827ceb 557 Gene3D G3DSA:3.40.50.10710 208 365 7.8E-162 T 12-10-2018 N288_10035 8d99fa67f51676d83b82ceef5f827ceb 557 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 366 408 8.0E-10 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain N288_10035 8d99fa67f51676d83b82ceef5f827ceb 557 Pfam PF00753 Metallo-beta-lactamase superfamily 19 170 6.0E-17 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_24150 65bd45d131fac79cb6435f0fc2fe35a6 115 Pfam PF08830 Protein of unknown function (DUF1806) 3 114 1.6E-52 T 12-10-2018 IPR014934 Protein of unknown function DUF1806 N288_24150 65bd45d131fac79cb6435f0fc2fe35a6 115 Gene3D G3DSA:2.70.180.10 1 115 2.2E-49 T 12-10-2018 IPR036492 Hypothetical protein YojF superfamily N288_24150 65bd45d131fac79cb6435f0fc2fe35a6 115 SUPERFAMILY SSF89442 1 115 7.45E-51 T 12-10-2018 IPR036492 Hypothetical protein YojF superfamily N288_21675 cf964eaf5cd445e79be92fc0650b9a57 499 Pfam PF14559 Tetratricopeptide repeat 163 224 1.3E-5 T 12-10-2018 N288_21675 cf964eaf5cd445e79be92fc0650b9a57 499 SMART SM00028 187 220 0.83 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_21675 cf964eaf5cd445e79be92fc0650b9a57 499 SMART SM00028 290 323 410.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_21675 cf964eaf5cd445e79be92fc0650b9a57 499 SMART SM00028 90 123 49.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_21675 cf964eaf5cd445e79be92fc0650b9a57 499 SMART SM00028 21 54 0.32 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_21675 cf964eaf5cd445e79be92fc0650b9a57 499 SUPERFAMILY SSF48452 22 324 7.4E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_21675 cf964eaf5cd445e79be92fc0650b9a57 499 Gene3D G3DSA:1.25.40.10 20 129 7.1E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_21675 cf964eaf5cd445e79be92fc0650b9a57 499 Pfam PF05225 helix-turn-helix, Psq domain 458 492 4.2E-5 T 12-10-2018 IPR007889 DNA binding HTH domain, Psq-type GO:0003677 N288_21675 cf964eaf5cd445e79be92fc0650b9a57 499 Gene3D G3DSA:1.25.40.10 148 326 4.3E-21 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_07790 8c70aa927dad8394f35403965d068252 118 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 5 112 1.2E-39 T 12-10-2018 IPR005562 SpoVA N288_07790 8c70aa927dad8394f35403965d068252 118 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 5 118 2.4E-49 T 12-10-2018 IPR014204 Sporulation stage V, protein AE N288_21695 31c205ecad06ad79f840e1fe0ce36c03 212 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 204 37.513 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 N288_21695 31c205ecad06ad79f840e1fe0ce36c03 212 Gene3D G3DSA:3.40.50.880 1 211 1.0E-73 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_21695 31c205ecad06ad79f840e1fe0ce36c03 212 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 203 6.5E-71 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 N288_21695 31c205ecad06ad79f840e1fe0ce36c03 212 PIRSF PIRSF000495 1 207 1.9E-74 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 N288_21695 31c205ecad06ad79f840e1fe0ce36c03 212 Pfam PF00117 Glutamine amidotransferase class-I 14 202 9.3E-22 T 12-10-2018 IPR017926 Glutamine amidotransferase N288_21695 31c205ecad06ad79f840e1fe0ce36c03 212 SUPERFAMILY SSF52317 2 203 3.89E-57 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_04335 b73f3d6e4ae649e495212e74cd4fe02a 244 Gene3D G3DSA:3.30.70.1290 1 169 1.4E-37 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 N288_04335 b73f3d6e4ae649e495212e74cd4fe02a 244 Pfam PF01797 Transposase IS200 like 4 114 2.1E-17 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 N288_04335 b73f3d6e4ae649e495212e74cd4fe02a 244 SMART SM01321 1 114 5.9E-39 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 N288_04335 b73f3d6e4ae649e495212e74cd4fe02a 244 SUPERFAMILY SSF143422 3 117 1.01E-24 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 N288_06935 52e8bd513d7db7bb1f5a360ba4df374d 221 SMART SM00327 23 192 2.0E-6 T 12-10-2018 IPR002035 von Willebrand factor, type A N288_06935 52e8bd513d7db7bb1f5a360ba4df374d 221 Pfam PF10138 vWA found in TerF C terminus 24 220 4.2E-79 T 12-10-2018 IPR019303 vWA found in TerF C terminus N288_06935 52e8bd513d7db7bb1f5a360ba4df374d 221 SUPERFAMILY SSF53300 24 192 3.71E-12 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_06935 52e8bd513d7db7bb1f5a360ba4df374d 221 Gene3D G3DSA:3.40.50.410 22 198 5.0E-6 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_24260 19260f64368413b7afa2a6e50852577d 158 PIRSF PIRSF006181 1 158 5.2E-58 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC N288_24260 19260f64368413b7afa2a6e50852577d 158 Gene3D G3DSA:3.90.960.10 1 158 1.6E-48 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 N288_24260 19260f64368413b7afa2a6e50852577d 158 SUPERFAMILY SSF55826 6 155 1.57E-36 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 N288_24260 19260f64368413b7afa2a6e50852577d 158 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 6 155 8.7E-55 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC N288_24260 19260f64368413b7afa2a6e50852577d 158 Pfam PF04073 Aminoacyl-tRNA editing domain 36 146 1.4E-19 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 N288_06655 f4cb37df37b22d573ad2374ac0efa8d5 455 Pfam PF14398 YheC/D like ATP-grasp 187 442 1.2E-82 T 12-10-2018 IPR026838 Endospore coat-associated protein YheC/D N288_06655 f4cb37df37b22d573ad2374ac0efa8d5 455 SUPERFAMILY SSF56059 213 416 1.31E-11 T 12-10-2018 N288_06655 f4cb37df37b22d573ad2374ac0efa8d5 455 Gene3D G3DSA:3.30.470.20 310 434 1.4E-5 T 12-10-2018 N288_16415 76309e78cabf7db6e08104252fc888a1 257 SUPERFAMILY SSF103473 29 242 7.06E-5 T 12-10-2018 IPR036259 MFS transporter superfamily N288_16415 76309e78cabf7db6e08104252fc888a1 257 Pfam PF03741 Integral membrane protein TerC family 35 216 3.0E-52 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 N288_16415 76309e78cabf7db6e08104252fc888a1 257 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 32 244 8.0E-78 T 12-10-2018 IPR022493 Integral membrane YkoY N288_20395 447327defaf1ea128114e8c5ca86e823 369 SUPERFAMILY SSF54826 1 126 3.86E-33 T 12-10-2018 N288_20395 447327defaf1ea128114e8c5ca86e823 369 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 1 359 44.068 T 12-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 N288_20395 447327defaf1ea128114e8c5ca86e823 369 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 125 2.1E-16 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain N288_20395 447327defaf1ea128114e8c5ca86e823 369 Gene3D G3DSA:3.20.20.120 118 346 1.7E-131 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily N288_20395 447327defaf1ea128114e8c5ca86e823 369 Gene3D G3DSA:3.30.390.10 8 357 1.7E-131 T 12-10-2018 IPR029017 Enolase-like, N-terminal N288_20395 447327defaf1ea128114e8c5ca86e823 369 Pfam PF13378 Enolase C-terminal domain-like 154 353 8.4E-44 T 12-10-2018 IPR029065 Enolase C-terminal domain-like N288_20395 447327defaf1ea128114e8c5ca86e823 369 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 11 331 4.9E-119 T 12-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 N288_20395 447327defaf1ea128114e8c5ca86e823 369 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 100 125 - T 12-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 N288_20395 447327defaf1ea128114e8c5ca86e823 369 SUPERFAMILY SSF51604 114 363 3.01E-67 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily N288_20395 447327defaf1ea128114e8c5ca86e823 369 SMART SM00922 142 234 9.1E-19 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal N288_13660 2a810a8853f86ef0fe303c6c7c569aa5 460 Gene3D G3DSA:3.30.750.44 25 124 7.6E-6 T 12-10-2018 N288_13660 2a810a8853f86ef0fe303c6c7c569aa5 460 Gene3D G3DSA:3.90.226.10 231 455 1.2E-21 T 12-10-2018 N288_13660 2a810a8853f86ef0fe303c6c7c569aa5 460 SUPERFAMILY SSF52096 51 450 2.15E-32 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_13660 2a810a8853f86ef0fe303c6c7c569aa5 460 Pfam PF03572 Peptidase family S41 246 431 1.5E-16 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 N288_18575 078ef5140631264f668fce9ca55c9e1f 189 SUPERFAMILY SSF52374 2 188 1.51E-55 T 12-10-2018 N288_18575 078ef5140631264f668fce9ca55c9e1f 189 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 188 32.795 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 N288_18575 078ef5140631264f668fce9ca55c9e1f 189 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 187 2.5E-58 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 N288_18575 078ef5140631264f668fce9ca55c9e1f 189 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 66 2.7E-10 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 N288_18575 078ef5140631264f668fce9ca55c9e1f 189 Gene3D G3DSA:3.40.50.620 1 188 4.2E-68 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_18575 078ef5140631264f668fce9ca55c9e1f 189 Pfam PF01467 Cytidylyltransferase-like 6 162 1.1E-33 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 N288_23760 3bb12a1ad89dfdf8516056dbaf33a053 413 Pfam PF00464 Serine hydroxymethyltransferase 4 380 5.4E-184 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 N288_23760 3bb12a1ad89dfdf8516056dbaf33a053 413 SUPERFAMILY SSF53383 2 411 3.81E-186 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_23760 3bb12a1ad89dfdf8516056dbaf33a053 413 Gene3D G3DSA:3.90.1150.10 6 389 4.2E-193 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_23760 3bb12a1ad89dfdf8516056dbaf33a053 413 PIRSF PIRSF000412 1 412 1.3E-176 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 N288_23760 3bb12a1ad89dfdf8516056dbaf33a053 413 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 218 234 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 N288_23760 3bb12a1ad89dfdf8516056dbaf33a053 413 Gene3D G3DSA:3.40.640.10 33 283 4.2E-193 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_23760 3bb12a1ad89dfdf8516056dbaf33a053 413 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 411 54.586 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 N288_21280 2b1c795e415594b65932939328acc630 354 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 195 351 3.3E-23 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 N288_21280 2b1c795e415594b65932939328acc630 354 Gene3D G3DSA:3.30.300.210 214 354 7.1E-15 T 12-10-2018 IPR038501 Spore germination GerAC superfamily N288_21280 2b1c795e415594b65932939328acc630 354 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 5 353 1.0E-70 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 N288_07990 7326c21f8a59cee0758e2f32d92ac19e 337 SUPERFAMILY SSF52540 7 252 3.27E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_07990 7326c21f8a59cee0758e2f32d92ac19e 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 299 1.6E-16 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_07990 7326c21f8a59cee0758e2f32d92ac19e 337 Pfam PF00005 ABC transporter 29 180 1.1E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_07990 7326c21f8a59cee0758e2f32d92ac19e 337 SMART SM00382 37 245 3.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_07990 7326c21f8a59cee0758e2f32d92ac19e 337 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_07990 7326c21f8a59cee0758e2f32d92ac19e 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 319 2.3E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_07990 7326c21f8a59cee0758e2f32d92ac19e 337 Gene3D G3DSA:3.40.50.300 5 334 1.5E-103 T 12-10-2018 N288_03890 1e69924c8d3f9609dac44a37c8ed4336 562 SUPERFAMILY SSF56235 21 560 4.01E-168 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_03890 1e69924c8d3f9609dac44a37c8ed4336 562 Gene3D G3DSA:1.10.246.130 255 381 5.2E-41 T 12-10-2018 N288_03890 1e69924c8d3f9609dac44a37c8ed4336 562 Pfam PF01019 Gamma-glutamyltranspeptidase 43 556 6.8E-155 T 12-10-2018 N288_03890 1e69924c8d3f9609dac44a37c8ed4336 562 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 143 162 1.6E-67 T 12-10-2018 N288_03890 1e69924c8d3f9609dac44a37c8ed4336 562 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 239 255 1.6E-67 T 12-10-2018 N288_03890 1e69924c8d3f9609dac44a37c8ed4336 562 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 125 143 1.6E-67 T 12-10-2018 N288_03890 1e69924c8d3f9609dac44a37c8ed4336 562 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 269 288 1.6E-67 T 12-10-2018 N288_03890 1e69924c8d3f9609dac44a37c8ed4336 562 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 382 400 1.6E-67 T 12-10-2018 N288_03890 1e69924c8d3f9609dac44a37c8ed4336 562 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 461 478 1.6E-67 T 12-10-2018 N288_03890 1e69924c8d3f9609dac44a37c8ed4336 562 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 437 452 1.6E-67 T 12-10-2018 N288_03890 1e69924c8d3f9609dac44a37c8ed4336 562 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 50 75 1.6E-67 T 12-10-2018 N288_03890 1e69924c8d3f9609dac44a37c8ed4336 562 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 406 424 1.6E-67 T 12-10-2018 N288_03890 1e69924c8d3f9609dac44a37c8ed4336 562 Gene3D G3DSA:3.60.20.40 382 560 6.7E-64 T 12-10-2018 N288_03890 1e69924c8d3f9609dac44a37c8ed4336 562 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 29 554 6.3E-175 T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 N288_18520 308d27060d53b182669ae261a0089817 374 SUPERFAMILY SSF53163 4 373 9.59E-133 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily N288_18520 308d27060d53b182669ae261a0089817 374 TIGRFAM TIGR01441 GPR: GPR endopeptidase 10 373 8.7E-183 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 N288_18520 308d27060d53b182669ae261a0089817 374 Hamap MF_00626 Germination protease [gpr]. 1 374 157.037 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 N288_18520 308d27060d53b182669ae261a0089817 374 Pfam PF03418 Germination protease 17 373 5.2E-198 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 N288_18520 308d27060d53b182669ae261a0089817 374 Gene3D G3DSA:3.40.50.1450 1 292 1.4E-112 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily N288_18520 308d27060d53b182669ae261a0089817 374 Gene3D G3DSA:3.40.50.1450 293 374 6.2E-17 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily N288_18520 308d27060d53b182669ae261a0089817 374 ProDom PD041835 PROTEASE GERMINATION HYDROLASE SPORE GPR ENDOPEPTIDASE PROTEINASE ZYMOGEN PRECURSOR PEPTIDASE 10 374 4.0E-159 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 N288_18520 308d27060d53b182669ae261a0089817 374 PIRSF PIRSF019549 3 374 1.0E-183 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 N288_23380 72a99605a518c65bee7b1dd5f601ab80 424 PIRSF PIRSF000124 2 414 3.3E-84 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 N288_23380 72a99605a518c65bee7b1dd5f601ab80 424 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 307 402 4.3E-24 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 N288_23380 72a99605a518c65bee7b1dd5f601ab80 424 SUPERFAMILY SSF51735 3 191 4.35E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_23380 72a99605a518c65bee7b1dd5f601ab80 424 SMART SM00984 307 403 3.8E-32 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 N288_23380 72a99605a518c65bee7b1dd5f601ab80 424 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 284 7.3E-26 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 N288_23380 72a99605a518c65bee7b1dd5f601ab80 424 SUPERFAMILY SSF48179 197 290 2.21E-26 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_23380 72a99605a518c65bee7b1dd5f601ab80 424 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 179 3.3E-56 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 N288_23380 72a99605a518c65bee7b1dd5f601ab80 424 PIRSF PIRSF500136 1 418 1.2E-154 T 12-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 N288_23380 72a99605a518c65bee7b1dd5f601ab80 424 SUPERFAMILY SSF52413 295 404 2.35E-27 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 N288_23380 72a99605a518c65bee7b1dd5f601ab80 424 Gene3D G3DSA:3.40.50.720 196 418 9.0E-68 T 12-10-2018 N288_23380 72a99605a518c65bee7b1dd5f601ab80 424 Gene3D G3DSA:3.40.50.720 1 195 1.9E-69 T 12-10-2018 N288_23380 72a99605a518c65bee7b1dd5f601ab80 424 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 3 399 4.5E-136 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 N288_04945 df946ec07d63e1a9bd2cd6b304ad89fd 301 Pfam PF01636 Phosphotransferase enzyme family 25 261 1.2E-22 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase N288_04945 df946ec07d63e1a9bd2cd6b304ad89fd 301 SUPERFAMILY SSF56112 25 256 4.98E-27 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_04945 df946ec07d63e1a9bd2cd6b304ad89fd 301 Gene3D G3DSA:3.90.1200.10 112 301 4.3E-26 T 12-10-2018 N288_04945 df946ec07d63e1a9bd2cd6b304ad89fd 301 Gene3D G3DSA:3.30.200.20 2 96 1.5E-5 T 12-10-2018 N288_04625 4f70e9bfab779ea23f16501b5db3e845 177 Gene3D G3DSA:3.40.430.10 3 176 8.1E-50 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 N288_04625 4f70e9bfab779ea23f16501b5db3e845 177 Pfam PF01872 RibD C-terminal domain 6 166 2.9E-21 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 N288_04625 4f70e9bfab779ea23f16501b5db3e845 177 SUPERFAMILY SSF53597 6 176 2.49E-37 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 N288_23615 a42d08c541a7c01d1a906e97670dcfc0 435 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 416 1.7E-175 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_23615 a42d08c541a7c01d1a906e97670dcfc0 435 Gene3D G3DSA:3.65.10.10 7 414 2.3E-173 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 N288_23615 a42d08c541a7c01d1a906e97670dcfc0 435 Gene3D G3DSA:3.65.10.10 21 231 2.3E-173 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 N288_23615 a42d08c541a7c01d1a906e97670dcfc0 435 SUPERFAMILY SSF55205 2 417 1.7E-140 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 N288_23615 a42d08c541a7c01d1a906e97670dcfc0 435 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 45.071 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_23615 a42d08c541a7c01d1a906e97670dcfc0 435 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 407 1.3E-114 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 N288_07560 537829ef2494fa3e00792286ddadd5e4 312 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 310 71.778 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 N288_07560 537829ef2494fa3e00792286ddadd5e4 312 Gene3D G3DSA:3.40.47.10 1 312 1.6E-132 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_07560 537829ef2494fa3e00792286ddadd5e4 312 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 310 1.6E-134 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 N288_07560 537829ef2494fa3e00792286ddadd5e4 312 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 221 310 1.3E-35 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 N288_07560 537829ef2494fa3e00792286ddadd5e4 312 SUPERFAMILY SSF53901 3 310 4.8E-69 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_07560 537829ef2494fa3e00792286ddadd5e4 312 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 184 1.2E-31 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 N288_11565 616287339ac00a54f9d15abee21b6fdb 283 Pfam PF02645 Uncharacterised protein, DegV family COG1307 6 281 7.7E-75 T 12-10-2018 IPR003797 DegV N288_11565 616287339ac00a54f9d15abee21b6fdb 283 Gene3D G3DSA:3.40.50.10170 2 153 2.2E-43 T 12-10-2018 N288_11565 616287339ac00a54f9d15abee21b6fdb 283 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 7 280 2.7E-80 T 12-10-2018 IPR003797 DegV N288_11565 616287339ac00a54f9d15abee21b6fdb 283 Gene3D G3DSA:3.30.1180.10 157 280 8.8E-36 T 12-10-2018 N288_11565 616287339ac00a54f9d15abee21b6fdb 283 SUPERFAMILY SSF82549 4 282 4.97E-77 T 12-10-2018 N288_19230 68f929ebe9ef37520af3174eaeb60644 195 Gene3D G3DSA:3.40.50.300 1 195 2.9E-54 T 12-10-2018 N288_19230 68f929ebe9ef37520af3174eaeb60644 195 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 189 5.9E-70 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 N288_19230 68f929ebe9ef37520af3174eaeb60644 195 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 193 28.256 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 N288_19230 68f929ebe9ef37520af3174eaeb60644 195 SUPERFAMILY SSF52540 1 193 1.3E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_19230 68f929ebe9ef37520af3174eaeb60644 195 Pfam PF01926 50S ribosome-binding GTPase 26 143 1.5E-19 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_13240 841b0eddb45d0eef293362b5663169f5 404 SUPERFAMILY SSF46458 2 143 2.99E-41 T 12-10-2018 IPR009050 Globin-like superfamily N288_13240 841b0eddb45d0eef293362b5663169f5 404 Pfam PF00042 Globin 8 103 8.7E-10 T 12-10-2018 IPR000971 Globin GO:0020037 N288_13240 841b0eddb45d0eef293362b5663169f5 404 Gene3D G3DSA:2.40.30.10 152 260 2.3E-37 T 12-10-2018 N288_13240 841b0eddb45d0eef293362b5663169f5 404 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 270 289 1.1E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 N288_13240 841b0eddb45d0eef293362b5663169f5 404 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 206 213 1.1E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 N288_13240 841b0eddb45d0eef293362b5663169f5 404 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 234 243 1.1E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 N288_13240 841b0eddb45d0eef293362b5663169f5 404 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 364 372 1.1E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 N288_13240 841b0eddb45d0eef293362b5663169f5 404 SUPERFAMILY SSF52343 263 398 1.03E-34 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain N288_13240 841b0eddb45d0eef293362b5663169f5 404 Pfam PF00175 Oxidoreductase NAD-binding domain 271 378 2.1E-16 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 N288_13240 841b0eddb45d0eef293362b5663169f5 404 Gene3D G3DSA:3.40.50.80 261 402 8.7E-35 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain N288_13240 841b0eddb45d0eef293362b5663169f5 404 Pfam PF00970 Oxidoreductase FAD-binding domain 157 259 1.3E-9 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 N288_13240 841b0eddb45d0eef293362b5663169f5 404 Hamap MF_01252 Flavohemoprotein [hmp]. 1 402 53.2 T 12-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 N288_13240 841b0eddb45d0eef293362b5663169f5 404 SUPERFAMILY SSF63380 151 261 5.45E-30 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel N288_13240 841b0eddb45d0eef293362b5663169f5 404 Gene3D G3DSA:1.10.490.10 1 145 6.2E-57 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 N288_13240 841b0eddb45d0eef293362b5663169f5 404 PRINTS PR00410 Phenol hydroxylase reductase family signature 364 372 3.4E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 N288_13240 841b0eddb45d0eef293362b5663169f5 404 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 3.4E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 N288_13240 841b0eddb45d0eef293362b5663169f5 404 PRINTS PR00410 Phenol hydroxylase reductase family signature 270 289 3.4E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 N288_17005 cd6f5d3c3d7530fb710480effed5e145 368 SUPERFAMILY SSF55021 291 357 5.12E-9 T 12-10-2018 N288_17005 cd6f5d3c3d7530fb710480effed5e145 368 Pfam PF01842 ACT domain 297 345 1.6E-7 T 12-10-2018 IPR002912 ACT domain N288_17005 cd6f5d3c3d7530fb710480effed5e145 368 SUPERFAMILY SSF48179 175 284 4.08E-33 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_17005 cd6f5d3c3d7530fb710480effed5e145 368 Gene3D G3DSA:1.10.3660.10 182 295 1.4E-36 T 12-10-2018 N288_17005 cd6f5d3c3d7530fb710480effed5e145 368 Gene3D G3DSA:3.40.50.720 2 180 8.7E-50 T 12-10-2018 N288_17005 cd6f5d3c3d7530fb710480effed5e145 368 Pfam PF02153 Prephenate dehydrogenase 17 274 4.8E-76 T 12-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 N288_17005 cd6f5d3c3d7530fb710480effed5e145 368 Gene3D G3DSA:3.30.70.260 296 363 2.2E-5 T 12-10-2018 N288_17005 cd6f5d3c3d7530fb710480effed5e145 368 SUPERFAMILY SSF51735 4 171 6.03E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_00130 838952289e9a026f577c64416d29d9c7 187 Gene3D G3DSA:3.40.50.850 1 173 2.1E-43 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 N288_00130 838952289e9a026f577c64416d29d9c7 187 Pfam PF00857 Isochorismatase family 6 167 1.0E-28 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 N288_00130 838952289e9a026f577c64416d29d9c7 187 SUPERFAMILY SSF52499 4 168 1.31E-43 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 N288_10680 770763fcf3c0bb75f03576e847b67b78 234 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 230 4.0E-75 T 12-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 N288_10680 770763fcf3c0bb75f03576e847b67b78 234 SUPERFAMILY SSF53681 120 228 1.21E-35 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 N288_10680 770763fcf3c0bb75f03576e847b67b78 234 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 192 202 - T 12-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 N288_10680 770763fcf3c0bb75f03576e847b67b78 234 SUPERFAMILY SSF53681 1 116 9.48E-39 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 N288_10680 770763fcf3c0bb75f03576e847b67b78 234 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 1.1E-63 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 N288_10680 770763fcf3c0bb75f03576e847b67b78 234 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 N288_10680 770763fcf3c0bb75f03576e847b67b78 234 Gene3D G3DSA:3.40.50.1860 104 214 1.0E-86 T 12-10-2018 N288_10680 770763fcf3c0bb75f03576e847b67b78 234 Gene3D G3DSA:3.40.50.1860 4 222 1.0E-86 T 12-10-2018 N288_11585 608fdbc413197a7c7f2a501a6714fc49 519 Gene3D G3DSA:3.30.300.310 414 518 1.5E-35 T 12-10-2018 N288_11585 608fdbc413197a7c7f2a501a6714fc49 519 ProSitePatterns PS00455 Putative AMP-binding domain signature. 166 177 - T 12-10-2018 IPR020845 AMP-binding, conserved site N288_11585 608fdbc413197a7c7f2a501a6714fc49 519 SUPERFAMILY SSF56801 3 513 4.84E-152 T 12-10-2018 N288_11585 608fdbc413197a7c7f2a501a6714fc49 519 Gene3D G3DSA:3.40.50.12780 1 411 3.5E-117 T 12-10-2018 N288_11585 608fdbc413197a7c7f2a501a6714fc49 519 Pfam PF00501 AMP-binding enzyme 13 418 6.7E-103 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 N288_11585 608fdbc413197a7c7f2a501a6714fc49 519 Pfam PF13193 AMP-binding enzyme C-terminal domain 427 503 4.9E-20 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain N288_04450 617f5f2415de1f440a8e14211060971b 328 Pfam PF13556 PucR C-terminal helix-turn-helix domain 262 318 3.0E-18 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain N288_04450 617f5f2415de1f440a8e14211060971b 328 Gene3D G3DSA:1.10.10.2840 199 325 3.5E-16 T 12-10-2018 N288_03985 9481529fc9f1a336c3ef7ea32d8c02f9 517 Gene3D G3DSA:3.40.50.300 3 284 3.4E-69 T 12-10-2018 N288_03985 9481529fc9f1a336c3ef7ea32d8c02f9 517 Pfam PF12848 ABC transporter 229 314 1.2E-21 T 12-10-2018 IPR032781 ABC-transporter extension domain N288_03985 9481529fc9f1a336c3ef7ea32d8c02f9 517 Gene3D G3DSA:3.40.50.300 288 515 7.4E-45 T 12-10-2018 N288_03985 9481529fc9f1a336c3ef7ea32d8c02f9 517 SUPERFAMILY SSF52540 309 509 8.08E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_03985 9481529fc9f1a336c3ef7ea32d8c02f9 517 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_03985 9481529fc9f1a336c3ef7ea32d8c02f9 517 Pfam PF00005 ABC transporter 20 190 3.9E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_03985 9481529fc9f1a336c3ef7ea32d8c02f9 517 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_03985 9481529fc9f1a336c3ef7ea32d8c02f9 517 SMART SM00382 348 517 6.1E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_03985 9481529fc9f1a336c3ef7ea32d8c02f9 517 SMART SM00382 28 235 1.4E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_03985 9481529fc9f1a336c3ef7ea32d8c02f9 517 SUPERFAMILY SSF52540 4 244 1.75E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_03985 9481529fc9f1a336c3ef7ea32d8c02f9 517 Pfam PF00005 ABC transporter 341 468 8.3E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_01670 882f3e64e934f14cc59ad91c5202e087 430 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 3.8E-10 T 12-10-2018 N288_01670 882f3e64e934f14cc59ad91c5202e087 430 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 3.8E-10 T 12-10-2018 N288_01670 882f3e64e934f14cc59ad91c5202e087 430 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 3.8E-10 T 12-10-2018 N288_01670 882f3e64e934f14cc59ad91c5202e087 430 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 3.8E-10 T 12-10-2018 N288_01670 882f3e64e934f14cc59ad91c5202e087 430 Gene3D G3DSA:1.10.275.10 1 92 5.3E-41 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal N288_01670 882f3e64e934f14cc59ad91c5202e087 430 SUPERFAMILY SSF48557 2 427 3.3E-141 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 N288_01670 882f3e64e934f14cc59ad91c5202e087 430 Pfam PF00206 Lyase 5 286 3.2E-77 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal N288_01670 882f3e64e934f14cc59ad91c5202e087 430 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.6E-26 T 12-10-2018 IPR000362 Fumarate lyase family N288_01670 882f3e64e934f14cc59ad91c5202e087 430 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 1.6E-26 T 12-10-2018 IPR000362 Fumarate lyase family N288_01670 882f3e64e934f14cc59ad91c5202e087 430 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 1.6E-26 T 12-10-2018 IPR000362 Fumarate lyase family N288_01670 882f3e64e934f14cc59ad91c5202e087 430 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 1.6E-26 T 12-10-2018 IPR000362 Fumarate lyase family N288_01670 882f3e64e934f14cc59ad91c5202e087 430 SMART SM00998 349 429 4.4E-42 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 N288_01670 882f3e64e934f14cc59ad91c5202e087 430 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 N288_01670 882f3e64e934f14cc59ad91c5202e087 430 Gene3D G3DSA:1.10.40.30 349 430 1.1E-35 T 12-10-2018 N288_01670 882f3e64e934f14cc59ad91c5202e087 430 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 427 2.7E-27 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 N288_01670 882f3e64e934f14cc59ad91c5202e087 430 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 2.2E-185 T 12-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 N288_01670 882f3e64e934f14cc59ad91c5202e087 430 Gene3D G3DSA:1.20.200.10 93 348 1.0E-102 T 12-10-2018 N288_11970 20d216846129e9abf6f4423576b949f7 459 Gene3D G3DSA:1.10.1060.10 3 129 5.0E-42 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 N288_11970 20d216846129e9abf6f4423576b949f7 459 Gene3D G3DSA:3.50.50.60 133 257 5.9E-31 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_11970 20d216846129e9abf6f4423576b949f7 459 SUPERFAMILY SSF46548 6 146 6.28E-31 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 N288_11970 20d216846129e9abf6f4423576b949f7 459 Gene3D G3DSA:3.50.50.60 354 458 1.6E-9 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_11970 20d216846129e9abf6f4423576b949f7 459 Gene3D G3DSA:3.50.50.60 258 353 1.5E-12 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_11970 20d216846129e9abf6f4423576b949f7 459 PRINTS PR00419 Adrenodoxin reductase family signature 160 173 1.4E-16 T 12-10-2018 N288_11970 20d216846129e9abf6f4423576b949f7 459 PRINTS PR00419 Adrenodoxin reductase family signature 202 212 1.4E-16 T 12-10-2018 N288_11970 20d216846129e9abf6f4423576b949f7 459 PRINTS PR00419 Adrenodoxin reductase family signature 137 159 1.4E-16 T 12-10-2018 N288_11970 20d216846129e9abf6f4423576b949f7 459 PRINTS PR00419 Adrenodoxin reductase family signature 270 284 1.4E-16 T 12-10-2018 N288_11970 20d216846129e9abf6f4423576b949f7 459 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 137 437 1.3E-34 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 N288_11970 20d216846129e9abf6f4423576b949f7 459 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 16 123 4.0E-38 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 N288_11970 20d216846129e9abf6f4423576b949f7 459 SUPERFAMILY SSF51971 134 381 1.82E-60 T 12-10-2018 N288_10575 c9a2b8d21115ab9c22fe972f828ea065 305 Gene3D G3DSA:3.40.190.10 169 271 6.5E-11 T 12-10-2018 N288_10575 c9a2b8d21115ab9c22fe972f828ea065 305 SUPERFAMILY SSF53850 86 296 5.25E-26 T 12-10-2018 N288_10575 c9a2b8d21115ab9c22fe972f828ea065 305 Gene3D G3DSA:1.10.10.10 1 85 5.1E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_10575 c9a2b8d21115ab9c22fe972f828ea065 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.7E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 N288_10575 c9a2b8d21115ab9c22fe972f828ea065 305 SUPERFAMILY SSF46785 1 100 1.21E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_10575 c9a2b8d21115ab9c22fe972f828ea065 305 Gene3D G3DSA:3.40.190.10 118 293 6.5E-11 T 12-10-2018 N288_10575 c9a2b8d21115ab9c22fe972f828ea065 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 N288_10575 c9a2b8d21115ab9c22fe972f828ea065 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 N288_10575 c9a2b8d21115ab9c22fe972f828ea065 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 N288_10575 c9a2b8d21115ab9c22fe972f828ea065 305 Pfam PF03466 LysR substrate binding domain 117 297 1.1E-9 T 12-10-2018 IPR005119 LysR, substrate-binding N288_23880 6c78696612762163b18399e6c53f63a2 428 Gene3D G3DSA:3.65.10.10 6 412 8.1E-160 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 N288_23880 6c78696612762163b18399e6c53f63a2 428 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 414 2.3E-169 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_23880 6c78696612762163b18399e6c53f63a2 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 405 5.0E-93 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 N288_23880 6c78696612762163b18399e6c53f63a2 428 SUPERFAMILY SSF55205 1 415 3.27E-135 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 N288_23880 6c78696612762163b18399e6c53f63a2 428 Gene3D G3DSA:3.65.10.10 21 229 8.1E-160 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 N288_23880 6c78696612762163b18399e6c53f63a2 428 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 415 42.211 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_04365 8cefda973cdb7905de1a520fedf36632 110 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 82 2.2E-16 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain N288_04365 8cefda973cdb7905de1a520fedf36632 110 Gene3D G3DSA:3.30.70.100 1 110 5.0E-35 T 12-10-2018 N288_04365 8cefda973cdb7905de1a520fedf36632 110 SUPERFAMILY SSF54909 1 109 1.04E-19 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel N288_09965 699205e93cf84316d2c4290c61c4e6b8 318 PIRSF PIRSF004491 2 317 1.6E-98 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 N288_09965 699205e93cf84316d2c4290c61c4e6b8 318 Gene3D G3DSA:2.40.30.30 190 316 3.9E-41 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 N288_09965 699205e93cf84316d2c4290c61c4e6b8 318 SUPERFAMILY SSF52374 23 178 7.7E-28 T 12-10-2018 N288_09965 699205e93cf84316d2c4290c61c4e6b8 318 Gene3D G3DSA:3.40.50.620 6 189 2.7E-52 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_09965 699205e93cf84316d2c4290c61c4e6b8 318 Pfam PF01687 Riboflavin kinase 186 308 1.4E-36 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 N288_09965 699205e93cf84316d2c4290c61c4e6b8 318 SUPERFAMILY SSF82114 176 313 1.2E-44 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 N288_09965 699205e93cf84316d2c4290c61c4e6b8 318 Pfam PF06574 FAD synthetase 19 168 2.2E-47 T 12-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 N288_09965 699205e93cf84316d2c4290c61c4e6b8 318 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 21 312 4.8E-90 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 N288_09965 699205e93cf84316d2c4290c61c4e6b8 318 SMART SM00904 185 312 6.8E-57 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 N288_09965 699205e93cf84316d2c4290c61c4e6b8 318 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 22 68 1.2E-7 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 N288_25790 0d067dbb0d5fdccec0c1ee540ff81323 411 SUPERFAMILY SSF103473 5 397 9.55E-57 T 12-10-2018 IPR036259 MFS transporter superfamily N288_25790 0d067dbb0d5fdccec0c1ee540ff81323 411 Pfam PF07690 Major Facilitator Superfamily 13 229 5.3E-22 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_25790 0d067dbb0d5fdccec0c1ee540ff81323 411 Gene3D G3DSA:1.20.1250.20 209 409 6.2E-25 T 12-10-2018 N288_25790 0d067dbb0d5fdccec0c1ee540ff81323 411 Gene3D G3DSA:1.20.1250.20 3 196 9.5E-22 T 12-10-2018 N288_20350 a48f6cc12953254f609d25cc5453cb19 482 Gene3D G3DSA:3.30.870.10 110 302 5.5E-46 T 12-10-2018 N288_20350 a48f6cc12953254f609d25cc5453cb19 482 Gene3D G3DSA:3.30.870.10 307 451 3.1E-27 T 12-10-2018 N288_20350 a48f6cc12953254f609d25cc5453cb19 482 PIRSF PIRSF000850 100 276 0.058 T 12-10-2018 N288_20350 a48f6cc12953254f609d25cc5453cb19 482 PIRSF PIRSF000850 380 457 0.015 T 12-10-2018 N288_20350 a48f6cc12953254f609d25cc5453cb19 482 PIRSF PIRSF000850 279 394 0.0039 T 12-10-2018 N288_20350 a48f6cc12953254f609d25cc5453cb19 482 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 5 482 1.2E-197 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 N288_20350 a48f6cc12953254f609d25cc5453cb19 482 Pfam PF13091 PLD-like domain 323 447 3.1E-28 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 N288_20350 a48f6cc12953254f609d25cc5453cb19 482 Pfam PF13091 PLD-like domain 135 277 9.5E-16 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 N288_20350 a48f6cc12953254f609d25cc5453cb19 482 SUPERFAMILY SSF56024 78 312 2.79E-58 T 12-10-2018 N288_20350 a48f6cc12953254f609d25cc5453cb19 482 Hamap MF_01916 Cardiolipin synthase. 8 482 47.255 T 12-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 N288_20350 a48f6cc12953254f609d25cc5453cb19 482 SUPERFAMILY SSF56024 269 468 5.16E-52 T 12-10-2018 N288_20350 a48f6cc12953254f609d25cc5453cb19 482 Pfam PF13396 Phospholipase_D-nuclease N-terminal 14 56 1.3E-12 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal N288_20350 a48f6cc12953254f609d25cc5453cb19 482 SMART SM00155 217 244 2.6E-6 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 N288_20350 a48f6cc12953254f609d25cc5453cb19 482 SMART SM00155 395 422 1.9E-5 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 N288_09820 bb4dab4a04c2f17f596c67e317f700ff 154 SUPERFAMILY SSF50341 7 144 1.44E-38 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 N288_09820 bb4dab4a04c2f17f596c67e317f700ff 154 Gene3D G3DSA:2.30.30.40 12 137 1.2E-42 T 12-10-2018 N288_09820 bb4dab4a04c2f17f596c67e317f700ff 154 Gene3D G3DSA:2.40.50.180 29 138 1.2E-42 T 12-10-2018 N288_09820 bb4dab4a04c2f17f596c67e317f700ff 154 SMART SM00260 6 143 1.2E-37 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 N288_09820 bb4dab4a04c2f17f596c67e317f700ff 154 Pfam PF01584 CheW-like domain 11 144 7.5E-37 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 N288_23430 daff5ad6b077af810208598deed5e1c3 333 Pfam PF00395 S-layer homology domain 158 200 1.5E-11 T 12-10-2018 IPR001119 S-layer homology domain N288_23430 daff5ad6b077af810208598deed5e1c3 333 Pfam PF00395 S-layer homology domain 217 259 6.9E-15 T 12-10-2018 IPR001119 S-layer homology domain N288_23430 daff5ad6b077af810208598deed5e1c3 333 Gene3D G3DSA:3.90.1720.10 20 151 2.9E-45 T 12-10-2018 N288_23430 daff5ad6b077af810208598deed5e1c3 333 SUPERFAMILY SSF54001 20 149 1.47E-40 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily N288_23430 daff5ad6b077af810208598deed5e1c3 333 Pfam PF00877 NlpC/P60 family 41 146 1.9E-29 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain N288_23960 8609977721a5ac9bc573b879100aa1af 400 Gene3D G3DSA:3.30.870.10 228 396 1.2E-30 T 12-10-2018 N288_23960 8609977721a5ac9bc573b879100aa1af 400 Pfam PF13091 PLD-like domain 242 367 8.6E-27 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 N288_23960 8609977721a5ac9bc573b879100aa1af 400 Pfam PF13091 PLD-like domain 62 172 3.0E-12 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 N288_23960 8609977721a5ac9bc573b879100aa1af 400 Gene3D G3DSA:3.30.870.10 40 227 9.5E-40 T 12-10-2018 N288_23960 8609977721a5ac9bc573b879100aa1af 400 PIRSF PIRSF000850 302 396 3.1 T 12-10-2018 N288_23960 8609977721a5ac9bc573b879100aa1af 400 PIRSF PIRSF000850 23 133 0.0072 T 12-10-2018 N288_23960 8609977721a5ac9bc573b879100aa1af 400 PIRSF PIRSF000850 230 301 2.4E-4 T 12-10-2018 N288_23960 8609977721a5ac9bc573b879100aa1af 400 SUPERFAMILY SSF56024 39 228 8.52E-43 T 12-10-2018 N288_23960 8609977721a5ac9bc573b879100aa1af 400 SUPERFAMILY SSF56024 193 377 1.39E-39 T 12-10-2018 N288_23960 8609977721a5ac9bc573b879100aa1af 400 SMART SM00155 141 168 0.0085 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 N288_23960 8609977721a5ac9bc573b879100aa1af 400 SMART SM00155 313 340 2.6E-5 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 N288_23960 8609977721a5ac9bc573b879100aa1af 400 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 34 397 5.4E-94 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 N288_06955 faa45f5aaaf82f80118148d828187d57 67 Pfam PF09962 Uncharacterized conserved protein (DUF2196) 5 64 5.8E-31 T 12-10-2018 IPR019240 Protein of unknown function DUF2196 N288_06955 faa45f5aaaf82f80118148d828187d57 67 TIGRFAM TIGR03833 TIGR03833: conserved hypothetical protein 5 64 7.9E-32 T 12-10-2018 IPR019240 Protein of unknown function DUF2196 N288_18530 b81b4e7ab67c5af3c173e11e6c4a210b 346 Gene3D G3DSA:3.40.50.300 1 143 6.9E-43 T 12-10-2018 N288_18530 b81b4e7ab67c5af3c173e11e6c4a210b 346 Gene3D G3DSA:1.20.272.10 216 341 9.4E-40 T 12-10-2018 N288_18530 b81b4e7ab67c5af3c173e11e6c4a210b 346 Pfam PF06144 DNA polymerase III, delta subunit 18 194 1.4E-53 T 12-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 N288_18530 b81b4e7ab67c5af3c173e11e6c4a210b 346 Gene3D G3DSA:1.10.8.60 148 215 2.6E-14 T 12-10-2018 N288_18530 b81b4e7ab67c5af3c173e11e6c4a210b 346 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 15 336 1.5E-92 T 12-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 N288_18530 b81b4e7ab67c5af3c173e11e6c4a210b 346 SUPERFAMILY SSF48019 217 336 1.79E-26 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 N288_18530 b81b4e7ab67c5af3c173e11e6c4a210b 346 SUPERFAMILY SSF52540 3 214 2.39E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_15350 9f7a961f126529da955e4a0d0700feac 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 5.8E-19 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain N288_15350 9f7a961f126529da955e4a0d0700feac 96 Gene3D G3DSA:3.30.70.100 1 93 4.3E-26 T 12-10-2018 N288_15350 9f7a961f126529da955e4a0d0700feac 96 SUPERFAMILY SSF54909 1 92 3.47E-26 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel N288_02080 7d4dfa36adb35cc7e463db4c185be989 436 Gene3D G3DSA:2.60.40.1630 76 173 1.0E-6 T 12-10-2018 N288_02080 7d4dfa36adb35cc7e463db4c185be989 436 Pfam PF13786 Domain of unknown function (DUF4179) 43 135 7.1E-17 T 12-10-2018 IPR025436 Domain of unknown function DUF4179 N288_05070 f251897ba87835fa9a76852bc283a573 373 Gene3D G3DSA:1.10.10.2840 244 373 3.6E-24 T 12-10-2018 N288_05070 f251897ba87835fa9a76852bc283a573 373 Pfam PF05651 Putative sugar diacid recognition 4 137 3.6E-52 T 12-10-2018 IPR008599 Putative sugar diacid recognition N288_05070 f251897ba87835fa9a76852bc283a573 373 Pfam PF13556 PucR C-terminal helix-turn-helix domain 311 367 4.9E-22 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain N288_01965 3b96f21b0d627c98f99b2e49fedc5a1a 309 Gene3D G3DSA:2.60.200.40 130 284 2.3E-43 T 12-10-2018 N288_01965 3b96f21b0d627c98f99b2e49fedc5a1a 309 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 293 3.8E-116 T 12-10-2018 IPR005218 Diacylglycerol/lipid kinase N288_01965 3b96f21b0d627c98f99b2e49fedc5a1a 309 SMART SM00046 3 131 7.6E-12 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 N288_01965 3b96f21b0d627c98f99b2e49fedc5a1a 309 Gene3D G3DSA:3.40.50.10330 1 129 2.9E-49 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 N288_01965 3b96f21b0d627c98f99b2e49fedc5a1a 309 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 126 1.2E-38 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 N288_01965 3b96f21b0d627c98f99b2e49fedc5a1a 309 SUPERFAMILY SSF111331 1 293 5.01E-88 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily N288_12325 464fb92dc510eba99d9c96b36c5ba46d 151 SUPERFAMILY SSF49503 42 151 1.8E-13 T 12-10-2018 IPR008972 Cupredoxin N288_12325 464fb92dc510eba99d9c96b36c5ba46d 151 Gene3D G3DSA:2.60.40.420 35 151 8.6E-13 T 12-10-2018 IPR008972 Cupredoxin N288_09685 de0bd25ccac1fef94809e6c00728c16f 149 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 149 9.6E-53 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 N288_09685 de0bd25ccac1fef94809e6c00728c16f 149 Pfam PF00460 Flagella basal body rod protein 7 36 2.4E-8 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 N288_09685 de0bd25ccac1fef94809e6c00728c16f 149 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site N288_09685 de0bd25ccac1fef94809e6c00728c16f 149 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 99 146 1.2E-12 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain N288_05525 79032b4a3c7905ed852118b005d52528 359 Pfam PF00005 ABC transporter 20 161 1.9E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_05525 79032b4a3c7905ed852118b005d52528 359 SMART SM00382 28 211 2.7E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_05525 79032b4a3c7905ed852118b005d52528 359 Gene3D G3DSA:3.40.50.300 3 221 2.6E-66 T 12-10-2018 N288_05525 79032b4a3c7905ed852118b005d52528 359 Gene3D G3DSA:2.40.50.140 268 327 5.4E-5 T 12-10-2018 N288_05525 79032b4a3c7905ed852118b005d52528 359 Gene3D G3DSA:2.40.50.940 222 246 3.8E-8 T 12-10-2018 N288_05525 79032b4a3c7905ed852118b005d52528 359 SUPERFAMILY SSF52540 4 242 2.93E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_05525 79032b4a3c7905ed852118b005d52528 359 SUPERFAMILY SSF50331 236 339 4.13E-13 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal N288_05525 79032b4a3c7905ed852118b005d52528 359 Gene3D G3DSA:2.40.50.940 255 336 5.4E-5 T 12-10-2018 N288_05525 79032b4a3c7905ed852118b005d52528 359 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_06465 8e7ccd0e538e7fd08cac1a07f6fbe07c 453 SMART SM00116 225 274 0.44 T 12-10-2018 IPR000644 CBS domain N288_06465 8e7ccd0e538e7fd08cac1a07f6fbe07c 453 SMART SM00116 290 338 11.0 T 12-10-2018 IPR000644 CBS domain N288_06465 8e7ccd0e538e7fd08cac1a07f6fbe07c 453 Pfam PF03471 Transporter associated domain 355 430 5.5E-17 T 12-10-2018 IPR005170 Transporter-associated domain N288_06465 8e7ccd0e538e7fd08cac1a07f6fbe07c 453 Pfam PF00571 CBS domain 288 338 4.4E-4 T 12-10-2018 IPR000644 CBS domain N288_06465 8e7ccd0e538e7fd08cac1a07f6fbe07c 453 Pfam PF00571 CBS domain 217 270 1.2E-5 T 12-10-2018 IPR000644 CBS domain N288_06465 8e7ccd0e538e7fd08cac1a07f6fbe07c 453 SUPERFAMILY SSF56176 352 435 7.36E-17 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 N288_06465 8e7ccd0e538e7fd08cac1a07f6fbe07c 453 Pfam PF01595 Domain of unknown function DUF21 8 201 2.4E-49 T 12-10-2018 IPR002550 CNNM, transmembrane domain N288_06465 8e7ccd0e538e7fd08cac1a07f6fbe07c 453 SMART SM01091 354 431 1.4E-21 T 12-10-2018 IPR005170 Transporter-associated domain N288_06465 8e7ccd0e538e7fd08cac1a07f6fbe07c 453 Gene3D G3DSA:3.30.465.10 348 440 2.9E-16 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 N288_06465 8e7ccd0e538e7fd08cac1a07f6fbe07c 453 Gene3D G3DSA:3.10.580.10 195 347 6.0E-48 T 12-10-2018 N288_06465 8e7ccd0e538e7fd08cac1a07f6fbe07c 453 SUPERFAMILY SSF54631 204 341 6.57E-29 T 12-10-2018 N288_04535 885ebfb879b9de606fa9ec66f06d1d9a 290 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 18 221 4.3E-47 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT N288_04535 885ebfb879b9de606fa9ec66f06d1d9a 290 PIRSF PIRSF006483 1 289 2.8E-75 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT N288_04535 885ebfb879b9de606fa9ec66f06d1d9a 290 Gene3D G3DSA:3.30.70.120 199 273 1.2E-13 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal N288_04535 885ebfb879b9de606fa9ec66f06d1d9a 290 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 227 281 2.6E-18 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 N288_12490 9c85ab4100df515b1a3cca5fc1cf5c76 233 Gene3D G3DSA:2.40.100.10 93 233 8.2E-60 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily N288_12490 9c85ab4100df515b1a3cca5fc1cf5c76 233 SUPERFAMILY SSF160467 6 99 7.45E-16 T 12-10-2018 N288_12490 9c85ab4100df515b1a3cca5fc1cf5c76 233 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 217 6.5E-68 T 12-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 N288_12490 9c85ab4100df515b1a3cca5fc1cf5c76 233 SUPERFAMILY SSF50891 95 224 1.06E-47 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily N288_12490 9c85ab4100df515b1a3cca5fc1cf5c76 233 SMART SM00796 3 208 5.4E-94 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D N288_12490 9c85ab4100df515b1a3cca5fc1cf5c76 233 Gene3D G3DSA:3.30.1360.40 1 88 8.1E-22 T 12-10-2018 N288_12490 9c85ab4100df515b1a3cca5fc1cf5c76 233 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 207 1.8E-74 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D N288_13680 7f7608d5ec55b10c2263f06f64d04485 335 Gene3D G3DSA:3.90.25.10 185 319 4.7E-98 T 12-10-2018 N288_13680 7f7608d5ec55b10c2263f06f64d04485 335 SUPERFAMILY SSF51735 8 322 7.2E-86 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_13680 7f7608d5ec55b10c2263f06f64d04485 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 253 1.3E-54 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 N288_13680 7f7608d5ec55b10c2263f06f64d04485 335 Gene3D G3DSA:3.40.50.720 10 307 4.7E-98 T 12-10-2018 N288_13680 7f7608d5ec55b10c2263f06f64d04485 335 PRINTS PR01713 Nucleotide sugar epimerase signature 221 236 9.9E-24 T 12-10-2018 N288_13680 7f7608d5ec55b10c2263f06f64d04485 335 PRINTS PR01713 Nucleotide sugar epimerase signature 286 303 9.9E-24 T 12-10-2018 N288_13680 7f7608d5ec55b10c2263f06f64d04485 335 PRINTS PR01713 Nucleotide sugar epimerase signature 34 50 9.9E-24 T 12-10-2018 N288_13680 7f7608d5ec55b10c2263f06f64d04485 335 PRINTS PR01713 Nucleotide sugar epimerase signature 247 262 9.9E-24 T 12-10-2018 N288_25210 eec7a949166b0f7ff51d9504f7c8f5e4 148 Gene3D G3DSA:3.40.630.30 44 146 1.6E-25 T 12-10-2018 N288_25210 eec7a949166b0f7ff51d9504f7c8f5e4 148 Pfam PF00583 Acetyltransferase (GNAT) family 40 129 1.1E-16 T 12-10-2018 IPR000182 GNAT domain N288_25210 eec7a949166b0f7ff51d9504f7c8f5e4 148 SUPERFAMILY SSF55729 5 137 1.27E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_05715 035210615ed67d060031c80f8067dad9 299 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 74 2.6E-16 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain N288_05715 035210615ed67d060031c80f8067dad9 299 SUPERFAMILY SSF161098 92 284 1.16E-32 T 12-10-2018 IPR035906 MetI-like superfamily N288_05715 035210615ed67d060031c80f8067dad9 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 298 1.4E-32 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_05715 035210615ed67d060031c80f8067dad9 299 Gene3D G3DSA:1.10.3720.10 86 298 1.5E-26 T 12-10-2018 IPR035906 MetI-like superfamily N288_00715 d923aa0f034973cf90ac89cb5ed798a2 82 SUPERFAMILY SSF55315 5 80 3.01E-19 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like N288_00715 d923aa0f034973cf90ac89cb5ed798a2 82 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 5 80 5.9E-14 T 12-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 N288_00715 d923aa0f034973cf90ac89cb5ed798a2 82 Gene3D G3DSA:3.30.1330.30 1 81 7.3E-22 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like N288_12815 a4bf9fe0be2b33b53318871d33969c2f 345 Gene3D G3DSA:3.90.550.10 3 210 9.4E-28 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_12815 a4bf9fe0be2b33b53318871d33969c2f 345 SUPERFAMILY SSF53448 5 186 1.31E-24 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_12815 a4bf9fe0be2b33b53318871d33969c2f 345 Pfam PF00535 Glycosyl transferase family 2 7 177 2.0E-23 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 N288_13150 cf0e85cc9835c06ebcd7539155b9c27b 522 Pfam PF00271 Helicase conserved C-terminal domain 231 335 3.3E-30 T 12-10-2018 IPR001650 Helicase, C-terminal N288_13150 cf0e85cc9835c06ebcd7539155b9c27b 522 Pfam PF00270 DEAD/DEAH box helicase 25 192 1.4E-51 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 N288_13150 cf0e85cc9835c06ebcd7539155b9c27b 522 SMART SM00490 254 335 1.0E-33 T 12-10-2018 IPR001650 Helicase, C-terminal N288_13150 cf0e85cc9835c06ebcd7539155b9c27b 522 Gene3D G3DSA:3.40.50.300 211 395 9.7E-54 T 12-10-2018 N288_13150 cf0e85cc9835c06ebcd7539155b9c27b 522 Gene3D G3DSA:3.40.50.300 1 207 8.8E-76 T 12-10-2018 N288_13150 cf0e85cc9835c06ebcd7539155b9c27b 522 SMART SM00487 20 218 2.0E-62 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain N288_13150 cf0e85cc9835c06ebcd7539155b9c27b 522 SUPERFAMILY SSF52540 70 357 3.44E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_09480 1e15a8d27347dda0ed1f3e9b402c44cd 189 Gene3D G3DSA:1.10.10.10 1 60 1.5E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_09480 1e15a8d27347dda0ed1f3e9b402c44cd 189 SMART SM00420 8 60 0.0055 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 N288_09480 1e15a8d27347dda0ed1f3e9b402c44cd 189 PIRSF PIRSF037733 1 189 1.4E-85 T 12-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 N288_09480 1e15a8d27347dda0ed1f3e9b402c44cd 189 Pfam PF03061 Thioesterase superfamily 114 168 5.2E-5 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 N288_09480 1e15a8d27347dda0ed1f3e9b402c44cd 189 Pfam PF08220 DeoR-like helix-turn-helix domain 8 50 2.6E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 N288_09480 1e15a8d27347dda0ed1f3e9b402c44cd 189 SUPERFAMILY SSF54637 74 182 5.38E-25 T 12-10-2018 IPR029069 HotDog domain superfamily N288_09480 1e15a8d27347dda0ed1f3e9b402c44cd 189 Hamap MF_01814 Transcription factor FapR [fapR]. 1 188 38.911 T 12-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 N288_09480 1e15a8d27347dda0ed1f3e9b402c44cd 189 Gene3D G3DSA:3.10.129.10 68 187 6.2E-38 T 12-10-2018 N288_09480 1e15a8d27347dda0ed1f3e9b402c44cd 189 SUPERFAMILY SSF46785 5 52 1.39E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_22675 bdf5875dffc0d7a6255748b995d9016d 260 Pfam PF00294 pfkB family carbohydrate kinase 15 259 2.2E-40 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB N288_22675 bdf5875dffc0d7a6255748b995d9016d 260 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 23 47 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 N288_22675 bdf5875dffc0d7a6255748b995d9016d 260 Gene3D G3DSA:3.40.1190.20 1 260 6.9E-51 T 12-10-2018 IPR029056 Ribokinase-like N288_22675 bdf5875dffc0d7a6255748b995d9016d 260 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 217 230 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 N288_22675 bdf5875dffc0d7a6255748b995d9016d 260 SUPERFAMILY SSF53613 1 259 4.32E-55 T 12-10-2018 IPR029056 Ribokinase-like N288_04670 f10e9ecafd3ebb0b1eb0d4f301f834c7 417 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 396 415 2.8E-54 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_04670 f10e9ecafd3ebb0b1eb0d4f301f834c7 417 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 162 184 2.8E-54 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_04670 f10e9ecafd3ebb0b1eb0d4f301f834c7 417 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 331 352 2.8E-54 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_04670 f10e9ecafd3ebb0b1eb0d4f301f834c7 417 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 370 392 2.8E-54 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_04670 f10e9ecafd3ebb0b1eb0d4f301f834c7 417 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 252 271 2.8E-54 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_04670 f10e9ecafd3ebb0b1eb0d4f301f834c7 417 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 308 328 2.8E-54 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_04670 f10e9ecafd3ebb0b1eb0d4f301f834c7 417 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 21 38 2.8E-54 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_04670 f10e9ecafd3ebb0b1eb0d4f301f834c7 417 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 86 105 2.8E-54 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_04670 f10e9ecafd3ebb0b1eb0d4f301f834c7 417 Pfam PF02073 Thermophilic metalloprotease (M29) 11 415 5.9E-155 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_04670 f10e9ecafd3ebb0b1eb0d4f301f834c7 417 SUPERFAMILY SSF144052 12 416 9.94E-129 T 12-10-2018 N288_04670 f10e9ecafd3ebb0b1eb0d4f301f834c7 417 Gene3D G3DSA:3.40.1830.10 9 185 4.8E-58 T 12-10-2018 IPR035097 Peptidase M29, N-terminal N288_06710 c3115e3f1f74c3439897bddb782a6853 461 SUPERFAMILY SSF54373 301 407 1.1E-18 T 12-10-2018 N288_06710 c3115e3f1f74c3439897bddb782a6853 461 Gene3D G3DSA:3.90.660.20 40 407 2.1E-118 T 12-10-2018 N288_06710 c3115e3f1f74c3439897bddb782a6853 461 Pfam PF01593 Flavin containing amine oxidoreductase 11 457 1.3E-46 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 N288_06710 c3115e3f1f74c3439897bddb782a6853 461 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 2 457 1.1E-76 T 12-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 N288_06710 c3115e3f1f74c3439897bddb782a6853 461 SUPERFAMILY SSF51905 3 458 4.86E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_06710 c3115e3f1f74c3439897bddb782a6853 461 Gene3D G3DSA:1.10.3110.10 106 199 2.1E-118 T 12-10-2018 N288_06710 c3115e3f1f74c3439897bddb782a6853 461 Gene3D G3DSA:3.50.50.60 5 450 2.1E-118 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_16730 9f343dee8e0612a1ec809f342cfec3d7 384 Pfam PF02926 THUMP domain 19 154 7.2E-16 T 12-10-2018 IPR004114 THUMP domain GO:0003723 N288_16730 9f343dee8e0612a1ec809f342cfec3d7 384 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 300 306 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 N288_16730 9f343dee8e0612a1ec809f342cfec3d7 384 Gene3D G3DSA:3.30.2130.30 8 246 1.4E-124 T 12-10-2018 N288_16730 9f343dee8e0612a1ec809f342cfec3d7 384 SUPERFAMILY SSF53335 143 361 4.71E-41 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_16730 9f343dee8e0612a1ec809f342cfec3d7 384 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 196 207 - T 12-10-2018 IPR000241 Putative RNA methylase domain N288_16730 9f343dee8e0612a1ec809f342cfec3d7 384 SMART SM00981 57 155 1.1E-8 T 12-10-2018 IPR004114 THUMP domain GO:0003723 N288_16730 9f343dee8e0612a1ec809f342cfec3d7 384 Gene3D G3DSA:3.40.50.150 161 366 1.4E-124 T 12-10-2018 N288_16730 9f343dee8e0612a1ec809f342cfec3d7 384 Pfam PF01170 Putative RNA methylase family UPF0020 163 367 2.0E-65 T 12-10-2018 IPR000241 Putative RNA methylase domain N288_04485 c054c20819812eef1b7e962a32fd6636 353 Pfam PF03576 Peptidase family S58 23 337 1.3E-109 T 12-10-2018 IPR005321 Peptidase S58, DmpA N288_04485 c054c20819812eef1b7e962a32fd6636 353 SUPERFAMILY SSF56266 5 336 9.94E-101 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 N288_04485 c054c20819812eef1b7e962a32fd6636 353 Gene3D G3DSA:3.60.70.12 5 349 7.7E-133 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 N288_05485 a50902a9f21ae578ea04d5bd900d904d 409 Gene3D G3DSA:1.20.1250.20 215 408 8.6E-16 T 12-10-2018 N288_05485 a50902a9f21ae578ea04d5bd900d904d 409 Pfam PF07690 Major Facilitator Superfamily 21 356 7.9E-25 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_05485 a50902a9f21ae578ea04d5bd900d904d 409 Gene3D G3DSA:1.20.1250.20 1 195 2.1E-19 T 12-10-2018 N288_05485 a50902a9f21ae578ea04d5bd900d904d 409 PRINTS PR01988 Putative bacilysin exporter bacE signature 135 156 2.3E-10 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 N288_05485 a50902a9f21ae578ea04d5bd900d904d 409 PRINTS PR01988 Putative bacilysin exporter bacE signature 74 92 2.3E-10 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 N288_05485 a50902a9f21ae578ea04d5bd900d904d 409 PRINTS PR01988 Putative bacilysin exporter bacE signature 11 33 2.3E-10 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 N288_05485 a50902a9f21ae578ea04d5bd900d904d 409 PRINTS PR01988 Putative bacilysin exporter bacE signature 254 271 2.3E-10 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 N288_05485 a50902a9f21ae578ea04d5bd900d904d 409 PRINTS PR01988 Putative bacilysin exporter bacE signature 358 381 2.3E-10 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 N288_05485 a50902a9f21ae578ea04d5bd900d904d 409 PRINTS PR01988 Putative bacilysin exporter bacE signature 162 179 2.3E-10 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 N288_05485 a50902a9f21ae578ea04d5bd900d904d 409 SUPERFAMILY SSF103473 2 393 1.03E-47 T 12-10-2018 IPR036259 MFS transporter superfamily N288_08225 61b62d517445ede3f6e4d48de9ab2bb4 240 Gene3D G3DSA:3.30.1600.10 26 158 2.0E-76 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily N288_08225 61b62d517445ede3f6e4d48de9ab2bb4 240 Gene3D G3DSA:3.40.50.1220 8 232 2.0E-76 T 12-10-2018 N288_08225 61b62d517445ede3f6e4d48de9ab2bb4 240 Pfam PF02146 Sir2 family 17 188 3.1E-46 T 12-10-2018 IPR003000 Sirtuin family GO:0070403 N288_08225 61b62d517445ede3f6e4d48de9ab2bb4 240 SUPERFAMILY SSF52467 2 236 1.57E-77 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily N288_08225 61b62d517445ede3f6e4d48de9ab2bb4 240 Hamap MF_01968 NAD-dependent protein deacetylase [cobB]. 1 234 57.42 T 12-10-2018 IPR028628 Sirtuin, class U GO:0034979|GO:0051287 N288_25665 b1086b47f35e3160cd643597662b6487 296 Gene3D G3DSA:3.10.105.10 121 277 1.9E-118 T 12-10-2018 N288_25665 b1086b47f35e3160cd643597662b6487 296 SUPERFAMILY SSF53850 37 189 5.74E-50 T 12-10-2018 N288_25665 b1086b47f35e3160cd643597662b6487 296 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 31 176 3.6E-41 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 N288_25665 b1086b47f35e3160cd643597662b6487 296 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 196 295 4.2E-21 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 N288_25665 b1086b47f35e3160cd643597662b6487 296 SUPERFAMILY SSF53850 193 296 1.4E-29 T 12-10-2018 N288_25665 b1086b47f35e3160cd643597662b6487 296 Gene3D G3DSA:3.40.190.230 39 295 1.9E-118 T 12-10-2018 N288_14580 f378bb353baa48eadc75f989f772aae1 159 SUPERFAMILY SSF53850 25 156 3.44E-13 T 12-10-2018 N288_14580 f378bb353baa48eadc75f989f772aae1 159 Gene3D G3DSA:3.40.190.10 9 149 6.4E-13 T 12-10-2018 N288_14580 f378bb353baa48eadc75f989f772aae1 159 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 44 131 3.3E-9 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain N288_01710 ec5a31de04f93f81a1fb64df6fa991ab 511 Pfam PF01808 AICARFT/IMPCHase bienzyme 135 445 1.0E-119 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 N288_01710 ec5a31de04f93f81a1fb64df6fa991ab 511 SMART SM00851 14 129 1.0E-53 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain N288_01710 ec5a31de04f93f81a1fb64df6fa991ab 511 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 511 44.208 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 N288_01710 ec5a31de04f93f81a1fb64df6fa991ab 511 Gene3D G3DSA:3.40.140.20 203 360 3.8E-61 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 N288_01710 ec5a31de04f93f81a1fb64df6fa991ab 511 Gene3D G3DSA:3.40.140.20 385 511 7.3E-55 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 N288_01710 ec5a31de04f93f81a1fb64df6fa991ab 511 SMART SM00798 134 446 4.7E-199 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 N288_01710 ec5a31de04f93f81a1fb64df6fa991ab 511 SUPERFAMILY SSF53927 207 511 6.22E-125 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 N288_01710 ec5a31de04f93f81a1fb64df6fa991ab 511 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 511 9.2E-229 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 N288_01710 ec5a31de04f93f81a1fb64df6fa991ab 511 SUPERFAMILY SSF52335 2 193 5.36E-69 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily N288_01710 ec5a31de04f93f81a1fb64df6fa991ab 511 Gene3D G3DSA:3.40.50.1380 1 197 1.4E-86 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily N288_01710 ec5a31de04f93f81a1fb64df6fa991ab 511 PIRSF PIRSF000414 1 511 8.0E-212 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 N288_01710 ec5a31de04f93f81a1fb64df6fa991ab 511 Pfam PF02142 MGS-like domain 14 128 3.4E-28 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain N288_22265 3a291407c4f8295a37940aa7969521e6 421 Pfam PF07075 Protein of unknown function (DUF1343) 59 421 1.2E-152 T 12-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 N288_22265 3a291407c4f8295a37940aa7969521e6 421 Gene3D G3DSA:3.90.1150.140 254 406 5.4E-161 T 12-10-2018 N288_22265 3a291407c4f8295a37940aa7969521e6 421 PIRSF PIRSF016719 1 421 1.7E-187 T 12-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 N288_22265 3a291407c4f8295a37940aa7969521e6 421 Gene3D G3DSA:3.40.50.12170 42 421 5.4E-161 T 12-10-2018 N288_02865 d0ec5bbfcf14689710b471fcb60e2ccf 298 Gene3D G3DSA:1.10.600.10 2 288 3.9E-92 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily N288_02865 d0ec5bbfcf14689710b471fcb60e2ccf 298 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 160 186 - T 12-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 N288_02865 d0ec5bbfcf14689710b471fcb60e2ccf 298 SUPERFAMILY SSF48576 9 280 7.92E-76 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily N288_02865 d0ec5bbfcf14689710b471fcb60e2ccf 298 Pfam PF00494 Squalene/phytoene synthase 18 272 7.7E-69 T 12-10-2018 N288_08080 7dfc61cee8704ba13f19eb3d3647e3b1 695 Gene3D G3DSA:3.90.190.20 552 693 4.7E-22 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 N288_08080 7dfc61cee8704ba13f19eb3d3647e3b1 695 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 2 684 5.5E-229 T 12-10-2018 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 N288_08080 7dfc61cee8704ba13f19eb3d3647e3b1 695 Gene3D G3DSA:3.30.470.20 27 163 7.1E-14 T 12-10-2018 N288_08080 7dfc61cee8704ba13f19eb3d3647e3b1 695 Gene3D G3DSA:3.30.470.20 194 296 5.7E-13 T 12-10-2018 N288_08080 7dfc61cee8704ba13f19eb3d3647e3b1 695 SUPERFAMILY SSF53244 544 680 5.49E-23 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 N288_08080 7dfc61cee8704ba13f19eb3d3647e3b1 695 Pfam PF08245 Mur ligase middle domain 307 519 2.1E-23 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 N288_08080 7dfc61cee8704ba13f19eb3d3647e3b1 695 SUPERFAMILY SSF53623 265 547 1.57E-37 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 N288_08080 7dfc61cee8704ba13f19eb3d3647e3b1 695 Pfam PF02875 Mur ligase family, glutamate ligase domain 544 618 7.2E-10 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 N288_08080 7dfc61cee8704ba13f19eb3d3647e3b1 695 Pfam PF02655 ATP-grasp domain 36 267 4.2E-5 T 12-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 N288_08080 7dfc61cee8704ba13f19eb3d3647e3b1 695 SUPERFAMILY SSF56059 36 276 9.48E-28 T 12-10-2018 N288_08080 7dfc61cee8704ba13f19eb3d3647e3b1 695 Gene3D G3DSA:3.40.1190.10 297 541 1.2E-35 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 N288_04420 8906a32b32cb8c4e88db2cc4b56efa91 679 Gene3D G3DSA:2.60.40.1630 293 436 3.7E-6 T 12-10-2018 N288_04420 8906a32b32cb8c4e88db2cc4b56efa91 679 SUPERFAMILY SSF88659 96 159 2.24E-9 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_04420 8906a32b32cb8c4e88db2cc4b56efa91 679 Pfam PF13786 Domain of unknown function (DUF4179) 247 330 2.8E-10 T 12-10-2018 IPR025436 Domain of unknown function DUF4179 N288_04420 8906a32b32cb8c4e88db2cc4b56efa91 679 Pfam PF08281 Sigma-70, region 4 103 148 2.7E-8 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_04420 8906a32b32cb8c4e88db2cc4b56efa91 679 Gene3D G3DSA:1.10.10.10 89 161 7.2E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_21590 7bd323046a3b28ffda40e5a9e945dd77 511 PIRSF PIRSF001492 1 511 2.2E-204 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21590 7bd323046a3b28ffda40e5a9e945dd77 511 SUPERFAMILY SSF64158 77 310 1.26E-92 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21590 7bd323046a3b28ffda40e5a9e945dd77 511 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 509 3.8E-212 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21590 7bd323046a3b28ffda40e5a9e945dd77 511 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 299 1.1E-84 T 12-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21590 7bd323046a3b28ffda40e5a9e945dd77 511 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 510 49.812 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21590 7bd323046a3b28ffda40e5a9e945dd77 511 Gene3D G3DSA:3.40.720.10 5 508 4.6E-232 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 N288_21590 7bd323046a3b28ffda40e5a9e945dd77 511 SUPERFAMILY SSF53649 4 509 1.07E-72 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 N288_21590 7bd323046a3b28ffda40e5a9e945dd77 511 Gene3D G3DSA:3.40.1450.10 77 312 4.6E-232 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 N288_21590 7bd323046a3b28ffda40e5a9e945dd77 511 Pfam PF01676 Metalloenzyme superfamily 5 499 9.3E-79 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 N288_16080 6b8f4bdfcc45fccc165333abdee174fb 133 Gene3D G3DSA:1.10.10.10 2 133 8.6E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_16080 6b8f4bdfcc45fccc165333abdee174fb 133 SMART SM00347 23 122 1.8E-20 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_16080 6b8f4bdfcc45fccc165333abdee174fb 133 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 7.6E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_16080 6b8f4bdfcc45fccc165333abdee174fb 133 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 7.6E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_16080 6b8f4bdfcc45fccc165333abdee174fb 133 PRINTS PR00598 Bacterial regulatory protein MarR family signature 46 62 7.6E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_16080 6b8f4bdfcc45fccc165333abdee174fb 133 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 7.6E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_16080 6b8f4bdfcc45fccc165333abdee174fb 133 Pfam PF01047 MarR family 31 87 8.1E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_16080 6b8f4bdfcc45fccc165333abdee174fb 133 SUPERFAMILY SSF46785 6 132 2.02E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_11035 f15fe77a54786d65c01c9a9584a05b67 123 SUPERFAMILY SSF54593 6 123 2.42E-18 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_11035 f15fe77a54786d65c01c9a9584a05b67 123 Gene3D G3DSA:3.10.180.10 6 122 9.3E-18 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_11035 f15fe77a54786d65c01c9a9584a05b67 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 119 2.4E-7 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_13365 5be046d8c82c620fc0b12161f225d91b 198 ProSitePatterns PS00622 LuxR-type HTH domain signature. 151 178 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_13365 5be046d8c82c620fc0b12161f225d91b 198 Gene3D G3DSA:3.40.50.12740 2 196 4.4E-58 T 12-10-2018 N288_13365 5be046d8c82c620fc0b12161f225d91b 198 SUPERFAMILY SSF46894 119 197 7.48E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_13365 5be046d8c82c620fc0b12161f225d91b 198 SMART SM00448 2 112 3.6E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_13365 5be046d8c82c620fc0b12161f225d91b 198 SMART SM00421 134 191 9.9E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_13365 5be046d8c82c620fc0b12161f225d91b 198 SUPERFAMILY SSF52172 1 128 8.54E-29 T 12-10-2018 IPR011006 CheY-like superfamily N288_13365 5be046d8c82c620fc0b12161f225d91b 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 136 189 3.8E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_13365 5be046d8c82c620fc0b12161f225d91b 198 Pfam PF00072 Response regulator receiver domain 4 111 1.3E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_13365 5be046d8c82c620fc0b12161f225d91b 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 179 1.2E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_13365 5be046d8c82c620fc0b12161f225d91b 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 167 1.2E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_13365 5be046d8c82c620fc0b12161f225d91b 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 137 151 1.2E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_17535 45960c0e7a0f690aa870073b934fb852 395 SUPERFAMILY SSF53901 273 393 5.55E-43 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_17535 45960c0e7a0f690aa870073b934fb852 395 PIRSF PIRSF000429 1 395 2.3E-136 T 12-10-2018 IPR002155 Thiolase GO:0016747 N288_17535 45960c0e7a0f690aa870073b934fb852 395 ProSitePatterns PS00099 Thiolases active site. 376 389 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 N288_17535 45960c0e7a0f690aa870073b934fb852 395 Gene3D G3DSA:3.40.47.10 8 278 2.5E-160 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_17535 45960c0e7a0f690aa870073b934fb852 395 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 N288_17535 45960c0e7a0f690aa870073b934fb852 395 Pfam PF00108 Thiolase, N-terminal domain 6 264 8.1E-109 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 N288_17535 45960c0e7a0f690aa870073b934fb852 395 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 393 4.0E-151 T 12-10-2018 IPR002155 Thiolase GO:0016747 N288_17535 45960c0e7a0f690aa870073b934fb852 395 Pfam PF02803 Thiolase, C-terminal domain 273 393 4.2E-50 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 N288_17535 45960c0e7a0f690aa870073b934fb852 395 SUPERFAMILY SSF53901 5 272 1.92E-92 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_17535 45960c0e7a0f690aa870073b934fb852 395 ProSitePatterns PS00737 Thiolases signature 2. 341 357 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 N288_17535 45960c0e7a0f690aa870073b934fb852 395 Gene3D G3DSA:3.40.47.10 128 392 2.5E-160 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_08520 2846261b989bddcd7c8895c5e00f3b8c 397 Pfam PF01882 Protein of unknown function DUF58 210 288 8.5E-16 T 12-10-2018 IPR002881 Domain of unknown function DUF58 N288_11335 785d1b13eb372951d3fe973419007166 265 SUPERFAMILY SSF51735 2 225 1.05E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_11335 785d1b13eb372951d3fe973419007166 265 Gene3D G3DSA:3.40.50.720 3 204 1.1E-40 T 12-10-2018 N288_11335 785d1b13eb372951d3fe973419007166 265 Gene3D G3DSA:3.90.25.10 152 222 1.1E-40 T 12-10-2018 N288_11335 785d1b13eb372951d3fe973419007166 265 Pfam PF04321 RmlD substrate binding domain 16 211 2.7E-23 T 12-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 N288_06575 288cddc10dd576b2e1e80e78a8c0f96e 118 Pfam PF17280 Family of unknown function (DUF5345) 27 101 2.9E-24 T 12-10-2018 IPR035238 Protein of unknown function DUF5345 N288_14910 09c8820d752949988b9825cc8f2d3a52 152 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 9 146 1.6E-23 T 12-10-2018 IPR009936 Protein of unknown function DUF1468 N288_08690 189499a617048a69e14d9267fd2e0945 294 Pfam PF03466 LysR substrate binding domain 89 289 9.0E-31 T 12-10-2018 IPR005119 LysR, substrate-binding N288_08690 189499a617048a69e14d9267fd2e0945 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 7.8E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 N288_08690 189499a617048a69e14d9267fd2e0945 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 N288_08690 189499a617048a69e14d9267fd2e0945 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 N288_08690 189499a617048a69e14d9267fd2e0945 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 N288_08690 189499a617048a69e14d9267fd2e0945 294 Gene3D G3DSA:1.10.10.10 1 85 1.1E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_08690 189499a617048a69e14d9267fd2e0945 294 SUPERFAMILY SSF46785 7 112 4.86E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_08690 189499a617048a69e14d9267fd2e0945 294 SUPERFAMILY SSF53850 89 291 4.89E-28 T 12-10-2018 N288_08690 189499a617048a69e14d9267fd2e0945 294 Gene3D G3DSA:3.40.190.290 86 288 3.2E-66 T 12-10-2018 N288_11610 95a79b93ae3050c42ee48afb64042351 182 SUPERFAMILY SSF50475 3 164 2.06E-44 T 12-10-2018 N288_11610 95a79b93ae3050c42ee48afb64042351 182 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 16 161 1.5E-24 T 12-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related N288_11610 95a79b93ae3050c42ee48afb64042351 182 Gene3D G3DSA:2.30.110.10 2 163 4.7E-46 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 N288_12475 9752ce287c66080a7e646cd494b892a8 621 Gene3D G3DSA:3.20.20.220 313 599 4.9E-53 T 12-10-2018 N288_12475 9752ce287c66080a7e646cd494b892a8 621 SUPERFAMILY SSF51730 318 602 1.96E-70 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like N288_12475 9752ce287c66080a7e646cd494b892a8 621 Gene3D G3DSA:3.20.20.330 2 294 6.1E-86 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 N288_12475 9752ce287c66080a7e646cd494b892a8 621 Pfam PF02219 Methylenetetrahydrofolate reductase 318 575 9.4E-30 T 12-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 N288_12475 9752ce287c66080a7e646cd494b892a8 621 SUPERFAMILY SSF82282 2 361 4.71E-99 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 N288_12475 9752ce287c66080a7e646cd494b892a8 621 Pfam PF02574 Homocysteine S-methyltransferase 12 279 1.5E-55 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 N288_02900 ddc4918bd0a14ddf599cf3f38bac33a5 329 Pfam PF12833 Helix-turn-helix domain 244 320 8.9E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_02900 ddc4918bd0a14ddf599cf3f38bac33a5 329 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 13 192 1.4E-19 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal N288_02900 ddc4918bd0a14ddf599cf3f38bac33a5 329 SUPERFAMILY SSF46689 272 323 1.21E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_02900 ddc4918bd0a14ddf599cf3f38bac33a5 329 Gene3D G3DSA:1.10.10.60 216 327 1.6E-23 T 12-10-2018 N288_02900 ddc4918bd0a14ddf599cf3f38bac33a5 329 SMART SM00342 237 319 1.4E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_22665 21a85ccc578dbd48484f4dea998563fa 1713 Pfam PF00149 Calcineurin-like phosphoesterase 1167 1365 2.2E-8 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 N288_22665 21a85ccc578dbd48484f4dea998563fa 1713 Pfam PF00932 Lamin Tail Domain 325 436 1.6E-11 T 12-10-2018 IPR001322 Lamin tail domain N288_22665 21a85ccc578dbd48484f4dea998563fa 1713 Gene3D G3DSA:3.60.21.10 1167 1396 1.8E-15 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_22665 21a85ccc578dbd48484f4dea998563fa 1713 SUPERFAMILY SSF56300 1165 1378 3.59E-26 T 12-10-2018 N288_22665 21a85ccc578dbd48484f4dea998563fa 1713 SUPERFAMILY SSF74853 327 410 6.28E-8 T 12-10-2018 IPR036415 Lamin tail domain superfamily N288_22665 21a85ccc578dbd48484f4dea998563fa 1713 Gene3D G3DSA:2.60.40.10 892 977 6.2E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_22665 21a85ccc578dbd48484f4dea998563fa 1713 Pfam PF00395 S-layer homology domain 1548 1588 0.0014 T 12-10-2018 IPR001119 S-layer homology domain N288_22665 21a85ccc578dbd48484f4dea998563fa 1713 Pfam PF00395 S-layer homology domain 1664 1705 6.2E-7 T 12-10-2018 IPR001119 S-layer homology domain N288_22665 21a85ccc578dbd48484f4dea998563fa 1713 Pfam PF00395 S-layer homology domain 1607 1647 2.1E-9 T 12-10-2018 IPR001119 S-layer homology domain N288_13235 c03a677f962ffd498a39aaf780a13cee 158 Gene3D G3DSA:1.10.10.10 1 142 5.2E-43 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_13235 c03a677f962ffd498a39aaf780a13cee 158 SUPERFAMILY SSF46785 2 133 2.12E-38 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_13235 c03a677f962ffd498a39aaf780a13cee 158 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site N288_13235 c03a677f962ffd498a39aaf780a13cee 158 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 5.7E-41 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type N288_13235 c03a677f962ffd498a39aaf780a13cee 158 Pfam PF02082 Transcriptional regulator 1 82 1.1E-27 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type N288_07640 346974606846e94b664d270859f0081a 417 Pfam PF13200 Putative glycosyl hydrolase domain 87 407 5.1E-126 T 12-10-2018 IPR025275 Putative glycosyl hydrolase domain DUF4015 N288_07640 346974606846e94b664d270859f0081a 417 SUPERFAMILY SSF51445 136 409 1.11E-6 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_17795 044b0c6b99059a90278192d450b8fb9c 149 Hamap MF_00173 Arginine repressor [argR]. 1 149 69.047 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 N288_17795 044b0c6b99059a90278192d450b8fb9c 149 Gene3D G3DSA:3.30.1360.40 68 149 1.1E-31 T 12-10-2018 N288_17795 044b0c6b99059a90278192d450b8fb9c 149 PRINTS PR01467 Bacterial arginine repressor signature 118 133 6.1E-27 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 N288_17795 044b0c6b99059a90278192d450b8fb9c 149 PRINTS PR01467 Bacterial arginine repressor signature 21 34 6.1E-27 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 N288_17795 044b0c6b99059a90278192d450b8fb9c 149 PRINTS PR01467 Bacterial arginine repressor signature 88 101 6.1E-27 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 N288_17795 044b0c6b99059a90278192d450b8fb9c 149 PRINTS PR01467 Bacterial arginine repressor signature 37 52 6.1E-27 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 N288_17795 044b0c6b99059a90278192d450b8fb9c 149 Pfam PF01316 Arginine repressor, DNA binding domain 1 70 1.5E-29 T 12-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 N288_17795 044b0c6b99059a90278192d450b8fb9c 149 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 87 149 7.0E-24 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 N288_17795 044b0c6b99059a90278192d450b8fb9c 149 SUPERFAMILY SSF55252 80 149 1.22E-21 T 12-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 N288_17795 044b0c6b99059a90278192d450b8fb9c 149 SUPERFAMILY SSF46785 5 78 5.44E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_17795 044b0c6b99059a90278192d450b8fb9c 149 Pfam PF02863 Arginine repressor, C-terminal domain 81 145 2.8E-26 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 N288_17795 044b0c6b99059a90278192d450b8fb9c 149 Gene3D G3DSA:1.10.10.10 4 67 1.7E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_17795 044b0c6b99059a90278192d450b8fb9c 149 TIGRFAM TIGR01529 argR_whole: arginine repressor 5 148 5.4E-53 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 N288_23640 eade679fa84cc2aa6c42694755b472a8 504 Pfam PF00361 Proton-conducting membrane transporter 139 436 3.8E-66 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23640 eade679fa84cc2aa6c42694755b472a8 504 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 498 3.0E-140 T 12-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23640 eade679fa84cc2aa6c42694755b472a8 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 175 199 6.4E-37 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23640 eade679fa84cc2aa6c42694755b472a8 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 341 360 6.4E-37 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23640 eade679fa84cc2aa6c42694755b472a8 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 393 419 6.4E-37 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23640 eade679fa84cc2aa6c42694755b472a8 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 253 277 6.4E-37 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23640 eade679fa84cc2aa6c42694755b472a8 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 145 164 6.4E-37 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_06420 354a6a3c3989d89486fa291108fa3cda 104 Pfam PF06103 Bacterial protein of unknown function (DUF948) 6 93 4.7E-16 T 12-10-2018 IPR009293 Uncharacterised protein family UPF0478 N288_12620 c6dff3ccb4c802c73ad3185342b79eb7 92 SMART SM00850 3 91 3.5E-21 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 N288_12620 c6dff3ccb4c802c73ad3185342b79eb7 92 Pfam PF04397 LytTr DNA-binding domain 2 90 7.4E-23 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 N288_12620 c6dff3ccb4c802c73ad3185342b79eb7 92 Gene3D G3DSA:2.40.50.40 1 53 8.6E-9 T 12-10-2018 N288_20695 c4817287872572a021943cd7d5cccd75 388 Gene3D G3DSA:3.90.1150.10 31 379 2.8E-135 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_20695 c4817287872572a021943cd7d5cccd75 388 Gene3D G3DSA:3.40.640.10 62 283 2.8E-135 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_20695 c4817287872572a021943cd7d5cccd75 388 Pfam PF00155 Aminotransferase class I and II 31 380 8.3E-75 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 N288_20695 c4817287872572a021943cd7d5cccd75 388 SUPERFAMILY SSF53383 6 386 5.45E-121 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_20695 c4817287872572a021943cd7d5cccd75 388 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 233 246 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 N288_05685 1a2a62ce3d12f3531576763fe95550b8 582 Gene3D G3DSA:1.20.1560.10 4 325 1.5E-109 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_05685 1a2a62ce3d12f3531576763fe95550b8 582 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_05685 1a2a62ce3d12f3531576763fe95550b8 582 Pfam PF00005 ABC transporter 359 508 1.9E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_05685 1a2a62ce3d12f3531576763fe95550b8 582 SUPERFAMILY SSF52540 331 579 1.39E-96 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_05685 1a2a62ce3d12f3531576763fe95550b8 582 SUPERFAMILY SSF90123 5 328 7.72E-79 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_05685 1a2a62ce3d12f3531576763fe95550b8 582 Pfam PF00664 ABC transporter transmembrane region 22 294 1.3E-43 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 N288_05685 1a2a62ce3d12f3531576763fe95550b8 582 SMART SM00382 368 554 2.6E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_05685 1a2a62ce3d12f3531576763fe95550b8 582 Gene3D G3DSA:3.40.50.300 332 582 2.1E-94 T 12-10-2018 N288_13790 011a0a70ffe5338e383c7b18863d21fa 178 Pfam PF00583 Acetyltransferase (GNAT) family 58 147 3.6E-17 T 12-10-2018 IPR000182 GNAT domain N288_13790 011a0a70ffe5338e383c7b18863d21fa 178 Gene3D G3DSA:3.40.630.30 7 175 1.2E-41 T 12-10-2018 N288_13790 011a0a70ffe5338e383c7b18863d21fa 178 SUPERFAMILY SSF55729 9 175 1.59E-33 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_21235 94a4aba952cabb681e4714acbab67a73 305 SUPERFAMILY SSF51730 37 300 4.32E-76 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like N288_21235 94a4aba952cabb681e4714acbab67a73 305 PIRSF PIRSF000196 1 305 2.1E-134 T 12-10-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 N288_21235 94a4aba952cabb681e4714acbab67a73 305 Gene3D G3DSA:3.20.20.530 20 305 1.9E-97 T 12-10-2018 N288_21235 94a4aba952cabb681e4714acbab67a73 305 Pfam PF01619 Proline dehydrogenase 44 298 8.6E-36 T 12-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 N288_00635 90aea79226a81d13460945f7839ac953 216 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 2.0E-78 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 N288_00635 90aea79226a81d13460945f7839ac953 216 Gene3D G3DSA:1.10.3130.10 1 66 2.4E-24 T 12-10-2018 N288_00635 90aea79226a81d13460945f7839ac953 216 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 N288_00635 90aea79226a81d13460945f7839ac953 216 SUPERFAMILY SSF51161 2 168 1.18E-57 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily N288_00635 90aea79226a81d13460945f7839ac953 216 Gene3D G3DSA:2.160.10.10 67 183 5.8E-38 T 12-10-2018 N288_00635 90aea79226a81d13460945f7839ac953 216 Pfam PF06426 Serine acetyltransferase, N-terminal 3 35 2.8E-4 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 N288_00635 90aea79226a81d13460945f7839ac953 216 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 151 1.2E-7 T 12-10-2018 IPR001451 Hexapeptide repeat N288_00635 90aea79226a81d13460945f7839ac953 216 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 4.5E-4 T 12-10-2018 IPR001451 Hexapeptide repeat N288_00635 90aea79226a81d13460945f7839ac953 216 PIRSF PIRSF000441 1 216 3.6E-85 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 N288_08695 2b996bb72079884c93120a0a8c011c71 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 91 118 3.5E-4 T 12-10-2018 IPR001451 Hexapeptide repeat N288_08695 2b996bb72079884c93120a0a8c011c71 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 156 9.1E-10 T 12-10-2018 IPR001451 Hexapeptide repeat N288_08695 2b996bb72079884c93120a0a8c011c71 236 Gene3D G3DSA:3.30.70.250 1 84 6.4E-33 T 12-10-2018 N288_08695 2b996bb72079884c93120a0a8c011c71 236 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 174 202 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 N288_08695 2b996bb72079884c93120a0a8c011c71 236 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 165 198 3.7E-8 T 12-10-2018 IPR001451 Hexapeptide repeat N288_08695 2b996bb72079884c93120a0a8c011c71 236 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 1 235 45.924 T 12-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 N288_08695 2b996bb72079884c93120a0a8c011c71 236 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 6 236 3.6E-119 T 12-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 N288_08695 2b996bb72079884c93120a0a8c011c71 236 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 4 87 7.8E-35 T 12-10-2018 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 N288_08695 2b996bb72079884c93120a0a8c011c71 236 SUPERFAMILY SSF51161 90 225 1.15E-49 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily N288_08695 2b996bb72079884c93120a0a8c011c71 236 Gene3D G3DSA:2.160.10.10 85 236 8.7E-51 T 12-10-2018 N288_13220 f41e1363e2301460763a632e13924060 478 Gene3D G3DSA:2.120.10.30 15 185 6.8E-8 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like N288_13220 f41e1363e2301460763a632e13924060 478 Gene3D G3DSA:2.120.10.30 237 475 3.6E-7 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like N288_13220 f41e1363e2301460763a632e13924060 478 SUPERFAMILY SSF101898 32 460 5.49E-26 T 12-10-2018 N288_08805 f32c86219ac05acd9c0d1d24c1a5bf63 126 Gene3D G3DSA:3.40.30.10 15 126 1.1E-7 T 12-10-2018 N288_08805 f32c86219ac05acd9c0d1d24c1a5bf63 126 SUPERFAMILY SSF52833 23 122 3.03E-5 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_22105 1bb5a8df2a8bd2c9be3d8b8d415d0ef6 50 Pfam PF08970 Sporulation inhibitor A 1 47 7.2E-20 T 12-10-2018 IPR015064 Sporulation inhibitor A N288_22105 1bb5a8df2a8bd2c9be3d8b8d415d0ef6 50 SUPERFAMILY SSF100985 7 45 2.35E-7 T 12-10-2018 IPR036916 Sporulation inhibitor A superfamily N288_22105 1bb5a8df2a8bd2c9be3d8b8d415d0ef6 50 Gene3D G3DSA:1.10.287.1100 7 40 1.7E-5 T 12-10-2018 IPR036916 Sporulation inhibitor A superfamily N288_09225 a22b4fb625098dbee1ec7cbaf8cada25 242 Gene3D G3DSA:3.30.70.1880 84 240 1.5E-18 T 12-10-2018 N288_09225 a22b4fb625098dbee1ec7cbaf8cada25 242 Pfam PF05949 Bacterial protein of unknown function (DUF881) 85 232 4.0E-32 T 12-10-2018 IPR010273 Protein of unknown function DUF881 N288_09355 e9d45154f9f3f20d243b774cef39e275 238 SMART SM00934 4 229 3.0E-90 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_09355 e9d45154f9f3f20d243b774cef39e275 238 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 5 226 3.1E-56 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_09355 e9d45154f9f3f20d243b774cef39e275 238 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 12-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_09355 e9d45154f9f3f20d243b774cef39e275 238 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 4 226 5.3E-45 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_09355 e9d45154f9f3f20d243b774cef39e275 238 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 234 38.362 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_09355 e9d45154f9f3f20d243b774cef39e275 238 SUPERFAMILY SSF51366 1 236 2.06E-68 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 N288_09355 e9d45154f9f3f20d243b774cef39e275 238 Gene3D G3DSA:3.20.20.70 1 236 9.4E-79 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_13035 ee61866e19326554978a254d1e7413ac 335 Pfam PF11553 Protein of unknown function (DUF3231) 4 162 2.3E-54 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_13035 ee61866e19326554978a254d1e7413ac 335 Pfam PF11553 Protein of unknown function (DUF3231) 170 331 3.1E-45 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_13035 ee61866e19326554978a254d1e7413ac 335 Gene3D G3DSA:1.20.1260.10 3 148 1.2E-13 T 12-10-2018 IPR012347 Ferritin-like N288_13785 887f39a11d47a9505cc9be1002406adc 163 SUPERFAMILY SSF55729 1 149 1.06E-33 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_13785 887f39a11d47a9505cc9be1002406adc 163 Pfam PF00583 Acetyltransferase (GNAT) family 47 137 8.2E-18 T 12-10-2018 IPR000182 GNAT domain N288_13785 887f39a11d47a9505cc9be1002406adc 163 Gene3D G3DSA:3.40.630.30 1 160 1.1E-43 T 12-10-2018 N288_13505 0f78242f61c85525d7d7963cade14c8c 135 Gene3D G3DSA:3.90.79.10 2 130 1.3E-23 T 12-10-2018 N288_13505 0f78242f61c85525d7d7963cade14c8c 135 PRINTS PR00502 NUDIX hydrolase family signature 45 60 1.0E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_13505 0f78242f61c85525d7d7963cade14c8c 135 PRINTS PR00502 NUDIX hydrolase family signature 31 45 1.0E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_13505 0f78242f61c85525d7d7963cade14c8c 135 Pfam PF00293 NUDIX domain 7 120 7.3E-13 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_13505 0f78242f61c85525d7d7963cade14c8c 135 SUPERFAMILY SSF55811 6 127 3.79E-22 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_13505 0f78242f61c85525d7d7963cade14c8c 135 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_21640 306b3a4e562e439cef8ae3921202e8b8 201 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 2.3E-107 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 N288_21640 306b3a4e562e439cef8ae3921202e8b8 201 Gene3D G3DSA:3.90.226.10 1 196 1.1E-84 T 12-10-2018 N288_21640 306b3a4e562e439cef8ae3921202e8b8 201 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 12-10-2018 IPR033135 ClpP, histidine active site N288_21640 306b3a4e562e439cef8ae3921202e8b8 201 Pfam PF00574 Clp protease 13 192 1.5E-87 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA N288_21640 306b3a4e562e439cef8ae3921202e8b8 201 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 12-10-2018 IPR018215 ClpP, Ser active site N288_21640 306b3a4e562e439cef8ae3921202e8b8 201 SUPERFAMILY SSF52096 10 191 1.3E-73 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_21640 306b3a4e562e439cef8ae3921202e8b8 201 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 1.1E-53 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 N288_21640 306b3a4e562e439cef8ae3921202e8b8 201 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 1.1E-53 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 N288_21640 306b3a4e562e439cef8ae3921202e8b8 201 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 1.1E-53 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 N288_21640 306b3a4e562e439cef8ae3921202e8b8 201 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 1.1E-53 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 N288_21640 306b3a4e562e439cef8ae3921202e8b8 201 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 1.1E-53 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 N288_21640 306b3a4e562e439cef8ae3921202e8b8 201 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 44.159 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 N288_21705 9994cf517f2aa76d223ff24068c01f07 426 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 1 420 43.504 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 N288_21705 9994cf517f2aa76d223ff24068c01f07 426 PIRSF PIRSF000099 5 423 1.2E-174 T 12-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 N288_21705 9994cf517f2aa76d223ff24068c01f07 426 Pfam PF00815 Histidinol dehydrogenase 20 420 1.8E-176 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 N288_21705 9994cf517f2aa76d223ff24068c01f07 426 SUPERFAMILY SSF53720 21 421 1.29E-88 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 N288_21705 9994cf517f2aa76d223ff24068c01f07 426 Gene3D G3DSA:3.40.50.1980 226 342 1.8E-129 T 12-10-2018 N288_21705 9994cf517f2aa76d223ff24068c01f07 426 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 27 419 1.4E-172 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 N288_21705 9994cf517f2aa76d223ff24068c01f07 426 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 222 254 - T 12-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 N288_21705 9994cf517f2aa76d223ff24068c01f07 426 PRINTS PR00083 Histidinol dehydrogenase signature 27 51 1.5E-92 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 N288_21705 9994cf517f2aa76d223ff24068c01f07 426 PRINTS PR00083 Histidinol dehydrogenase signature 163 189 1.5E-92 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 N288_21705 9994cf517f2aa76d223ff24068c01f07 426 PRINTS PR00083 Histidinol dehydrogenase signature 222 243 1.5E-92 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 N288_21705 9994cf517f2aa76d223ff24068c01f07 426 PRINTS PR00083 Histidinol dehydrogenase signature 354 372 1.5E-92 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 N288_21705 9994cf517f2aa76d223ff24068c01f07 426 PRINTS PR00083 Histidinol dehydrogenase signature 244 263 1.5E-92 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 N288_21705 9994cf517f2aa76d223ff24068c01f07 426 PRINTS PR00083 Histidinol dehydrogenase signature 128 154 1.5E-92 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 N288_21705 9994cf517f2aa76d223ff24068c01f07 426 PRINTS PR00083 Histidinol dehydrogenase signature 193 218 1.5E-92 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 N288_21705 9994cf517f2aa76d223ff24068c01f07 426 PRINTS PR00083 Histidinol dehydrogenase signature 313 338 1.5E-92 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 N288_21705 9994cf517f2aa76d223ff24068c01f07 426 Gene3D G3DSA:3.40.50.1980 26 224 1.8E-129 T 12-10-2018 N288_17630 8a58379fbb1e65d3de05e6e56429844a 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 164 3.2E-53 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 N288_17630 8a58379fbb1e65d3de05e6e56429844a 468 Gene3D G3DSA:3.40.50.720 1 179 1.3E-57 T 12-10-2018 N288_17630 8a58379fbb1e65d3de05e6e56429844a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 9.7E-88 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 N288_17630 8a58379fbb1e65d3de05e6e56429844a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 195 9.7E-88 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 N288_17630 8a58379fbb1e65d3de05e6e56429844a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 9.7E-88 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 N288_17630 8a58379fbb1e65d3de05e6e56429844a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 9.7E-88 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 N288_17630 8a58379fbb1e65d3de05e6e56429844a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 9.7E-88 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 N288_17630 8a58379fbb1e65d3de05e6e56429844a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 9.7E-88 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 N288_17630 8a58379fbb1e65d3de05e6e56429844a 468 PIRSF PIRSF000109 1 468 1.6E-246 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 N288_17630 8a58379fbb1e65d3de05e6e56429844a 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 12-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 N288_17630 8a58379fbb1e65d3de05e6e56429844a 468 SUPERFAMILY SSF48179 176 467 1.26E-133 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_17630 8a58379fbb1e65d3de05e6e56429844a 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 467 1.6E-233 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 N288_17630 8a58379fbb1e65d3de05e6e56429844a 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 178 467 3.6E-138 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 N288_17630 8a58379fbb1e65d3de05e6e56429844a 468 Gene3D G3DSA:1.10.1040.10 180 435 1.3E-112 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 N288_17630 8a58379fbb1e65d3de05e6e56429844a 468 SUPERFAMILY SSF51735 4 176 3.4E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_17630 8a58379fbb1e65d3de05e6e56429844a 468 SMART SM01350 178 468 8.0E-233 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 N288_17630 8a58379fbb1e65d3de05e6e56429844a 468 Gene3D G3DSA:1.20.5.320 436 468 2.2E-21 T 12-10-2018 N288_25805 2022c67733d2bc6f1a5c491e21fdaebc 159 PIRSF PIRSF004505 1 159 6.3E-53 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 N288_25805 2022c67733d2bc6f1a5c491e21fdaebc 159 Pfam PF02590 Predicted SPOUT methyltransferase 2 158 1.1E-58 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 N288_25805 2022c67733d2bc6f1a5c491e21fdaebc 159 SUPERFAMILY SSF75217 2 157 5.43E-61 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases N288_25805 2022c67733d2bc6f1a5c491e21fdaebc 159 Gene3D G3DSA:3.40.1280.10 1 159 2.2E-66 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal N288_25805 2022c67733d2bc6f1a5c491e21fdaebc 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 30.398 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 N288_25805 2022c67733d2bc6f1a5c491e21fdaebc 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 159 6.5E-69 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 N288_23030 681db296c878de1da575ed94a2820dcb 443 SUPERFAMILY SSF53850 22 436 1.35E-62 T 12-10-2018 N288_23030 681db296c878de1da575ed94a2820dcb 443 Gene3D G3DSA:3.40.190.10 41 440 1.2E-65 T 12-10-2018 N288_23030 681db296c878de1da575ed94a2820dcb 443 Pfam PF13416 Bacterial extracellular solute-binding protein 67 368 5.4E-29 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein N288_12470 6c0dbff410fcf8ce764ba9347a6f3930 395 Gene3D G3DSA:3.90.1150.10 251 392 9.5E-46 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_12470 6c0dbff410fcf8ce764ba9347a6f3930 395 SUPERFAMILY SSF53383 17 382 3.75E-111 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_12470 6c0dbff410fcf8ce764ba9347a6f3930 395 Gene3D G3DSA:3.40.640.10 1 250 3.6E-90 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_12470 6c0dbff410fcf8ce764ba9347a6f3930 395 PIRSF PIRSF001434 1 385 7.3E-142 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 N288_12470 6c0dbff410fcf8ce764ba9347a6f3930 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 381 8.5E-142 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 N288_12470 6c0dbff410fcf8ce764ba9347a6f3930 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 192 206 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 N288_06200 6fe391b28f2973b4f619956c1fbdd1ba 132 Pfam PF17326 Family of unknown function (DUF5365) 1 113 7.0E-48 T 12-10-2018 IPR020355 Uncharacterised protein family YhcU N288_06200 6fe391b28f2973b4f619956c1fbdd1ba 132 ProDom PD081567 YHCU 1 95 1.0E-18 T 12-10-2018 IPR020355 Uncharacterised protein family YhcU N288_07255 2c36a05db5ee54b6dca691d98fbbe528 530 Gene3D G3DSA:3.30.300.310 420 523 1.4E-34 T 12-10-2018 N288_07255 2c36a05db5ee54b6dca691d98fbbe528 530 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 12-10-2018 IPR020845 AMP-binding, conserved site N288_07255 2c36a05db5ee54b6dca691d98fbbe528 530 SUPERFAMILY SSF56801 5 520 3.53E-146 T 12-10-2018 N288_07255 2c36a05db5ee54b6dca691d98fbbe528 530 Pfam PF00501 AMP-binding enzyme 12 424 2.1E-101 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 N288_07255 2c36a05db5ee54b6dca691d98fbbe528 530 Pfam PF13193 AMP-binding enzyme C-terminal domain 433 508 2.8E-18 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain N288_07255 2c36a05db5ee54b6dca691d98fbbe528 530 Gene3D G3DSA:3.40.50.12780 1 419 4.3E-121 T 12-10-2018 N288_13825 5e2b491107e00a2b9c02a9b9e4a47ce7 240 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 135 234 3.9E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_13825 5e2b491107e00a2b9c02a9b9e4a47ce7 240 SUPERFAMILY SSF55874 73 234 6.29E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_13825 5e2b491107e00a2b9c02a9b9e4a47ce7 240 PRINTS PR00344 Bacterial sensor protein C-terminal signature 185 195 1.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_13825 5e2b491107e00a2b9c02a9b9e4a47ce7 240 PRINTS PR00344 Bacterial sensor protein C-terminal signature 167 181 1.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_13825 5e2b491107e00a2b9c02a9b9e4a47ce7 240 PRINTS PR00344 Bacterial sensor protein C-terminal signature 220 233 1.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_13825 5e2b491107e00a2b9c02a9b9e4a47ce7 240 PRINTS PR00344 Bacterial sensor protein C-terminal signature 196 214 1.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_13825 5e2b491107e00a2b9c02a9b9e4a47ce7 240 SUPERFAMILY SSF47384 7 82 6.87E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_13825 5e2b491107e00a2b9c02a9b9e4a47ce7 240 SMART SM00388 19 83 3.9E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_13825 5e2b491107e00a2b9c02a9b9e4a47ce7 240 Gene3D G3DSA:3.30.565.10 88 237 1.8E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_13825 5e2b491107e00a2b9c02a9b9e4a47ce7 240 Pfam PF00512 His Kinase A (phospho-acceptor) domain 20 81 1.3E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_13825 5e2b491107e00a2b9c02a9b9e4a47ce7 240 Gene3D G3DSA:1.10.287.130 5 81 6.3E-13 T 12-10-2018 N288_13825 5e2b491107e00a2b9c02a9b9e4a47ce7 240 SMART SM00387 130 236 9.0E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_01455 947093eeba320b829162b0d2489b20e7 83 ProDom PD059965 SASP SPORULATION-SPECIFIC SIGMA-G-DEPENDENT SPORULATION SPECIFIC CSGA 1 82 7.0E-14 T 12-10-2018 IPR020255 Sigma-G-dependent sporulation-specific SASP protein N288_01455 947093eeba320b829162b0d2489b20e7 83 Pfam PF17334 Sigma-G-dependent sporulation-specific SASP protein 1 82 1.3E-33 T 12-10-2018 IPR020255 Sigma-G-dependent sporulation-specific SASP protein N288_09675 6ba1833cf849a19ed3213159bd6c418f 259 Pfam PF06018 CodY GAF-like domain 3 178 9.0E-84 T 12-10-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 N288_09675 6ba1833cf849a19ed3213159bd6c418f 259 Gene3D G3DSA:3.30.450.40 1 159 9.0E-72 T 12-10-2018 IPR029016 GAF-like domain superfamily N288_09675 6ba1833cf849a19ed3213159bd6c418f 259 PIRSF PIRSF011572 1 257 5.1E-126 T 12-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 N288_09675 6ba1833cf849a19ed3213159bd6c418f 259 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 3 253 3.8E-127 T 12-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 N288_09675 6ba1833cf849a19ed3213159bd6c418f 259 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 259 152.565 T 12-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 N288_09675 6ba1833cf849a19ed3213159bd6c418f 259 Pfam PF08222 CodY helix-turn-helix domain 197 257 8.0E-38 T 12-10-2018 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal N288_09675 6ba1833cf849a19ed3213159bd6c418f 259 SUPERFAMILY SSF46785 167 256 2.54E-42 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_09675 6ba1833cf849a19ed3213159bd6c418f 259 Gene3D G3DSA:1.10.10.10 160 259 5.3E-47 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_22775 04ea16760c5c2b02144919fc3dd6337b 469 Pfam PF00232 Glycosyl hydrolase family 1 12 469 1.5E-143 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_22775 04ea16760c5c2b02144919fc3dd6337b 469 SUPERFAMILY SSF51445 9 463 4.66E-168 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_22775 04ea16760c5c2b02144919fc3dd6337b 469 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 368 376 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site N288_22775 04ea16760c5c2b02144919fc3dd6337b 469 Gene3D G3DSA:3.20.20.80 11 468 1.7E-160 T 12-10-2018 N288_22775 04ea16760c5c2b02144919fc3dd6337b 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 392 403 3.3E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_22775 04ea16760c5c2b02144919fc3dd6337b 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 296 310 3.3E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_22775 04ea16760c5c2b02144919fc3dd6337b 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 437 449 3.3E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_22775 04ea16760c5c2b02144919fc3dd6337b 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 413 430 3.3E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_22775 04ea16760c5c2b02144919fc3dd6337b 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 376 3.3E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_22645 e3b5e584768c0ec23a70f0a047c07629 204 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 8 190 7.6E-21 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain N288_22645 e3b5e584768c0ec23a70f0a047c07629 204 Gene3D G3DSA:3.40.50.1110 2 204 4.5E-68 T 12-10-2018 IPR036514 SGNH hydrolase superfamily N288_22645 e3b5e584768c0ec23a70f0a047c07629 204 SUPERFAMILY SSF52266 4 202 1.83E-39 T 12-10-2018 N288_21605 50b34f95e597f317f5b137defa1cf7cf 335 PIRSF PIRSF000149 1 334 1.9E-144 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21605 50b34f95e597f317f5b137defa1cf7cf 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21605 50b34f95e597f317f5b137defa1cf7cf 335 Gene3D G3DSA:3.40.50.720 4 329 8.7E-162 T 12-10-2018 N288_21605 50b34f95e597f317f5b137defa1cf7cf 335 SMART SM00846 3 152 5.6E-99 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21605 50b34f95e597f317f5b137defa1cf7cf 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.9E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21605 50b34f95e597f317f5b137defa1cf7cf 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.9E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21605 50b34f95e597f317f5b137defa1cf7cf 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.9E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21605 50b34f95e597f317f5b137defa1cf7cf 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.9E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21605 50b34f95e597f317f5b137defa1cf7cf 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.9E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21605 50b34f95e597f317f5b137defa1cf7cf 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 1.0E-140 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21605 50b34f95e597f317f5b137defa1cf7cf 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 1.0E-72 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21605 50b34f95e597f317f5b137defa1cf7cf 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 6.1E-40 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21605 50b34f95e597f317f5b137defa1cf7cf 335 SUPERFAMILY SSF55347 152 314 5.36E-75 T 12-10-2018 N288_21605 50b34f95e597f317f5b137defa1cf7cf 335 SUPERFAMILY SSF51735 3 168 6.49E-68 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_21605 50b34f95e597f317f5b137defa1cf7cf 335 Gene3D G3DSA:3.30.360.10 151 315 8.7E-162 T 12-10-2018 N288_03150 b901c66cac2b0bea6dcc83ac20950bd4 391 Pfam PF00872 Transposase, Mutator family 11 366 6.7E-100 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 N288_13450 fa82dd7b1028f7fbf81c8cd026d7c9cf 478 Gene3D G3DSA:1.10.287.130 261 317 1.2E-16 T 12-10-2018 N288_13450 fa82dd7b1028f7fbf81c8cd026d7c9cf 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 471 3.2E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_13450 fa82dd7b1028f7fbf81c8cd026d7c9cf 478 SUPERFAMILY SSF47384 254 321 4.32E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_13450 fa82dd7b1028f7fbf81c8cd026d7c9cf 478 Pfam PF00512 His Kinase A (phospho-acceptor) domain 259 321 6.6E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_13450 fa82dd7b1028f7fbf81c8cd026d7c9cf 478 Gene3D G3DSA:3.30.565.10 318 470 5.1E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_13450 fa82dd7b1028f7fbf81c8cd026d7c9cf 478 SMART SM00387 364 472 1.4E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_13450 fa82dd7b1028f7fbf81c8cd026d7c9cf 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 431 3.0E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_13450 fa82dd7b1028f7fbf81c8cd026d7c9cf 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 3.0E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_13450 fa82dd7b1028f7fbf81c8cd026d7c9cf 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 469 3.0E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_13450 fa82dd7b1028f7fbf81c8cd026d7c9cf 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 417 3.0E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_13450 fa82dd7b1028f7fbf81c8cd026d7c9cf 478 SMART SM00388 258 323 6.5E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_13450 fa82dd7b1028f7fbf81c8cd026d7c9cf 478 SUPERFAMILY SSF55874 317 472 6.29E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_13450 fa82dd7b1028f7fbf81c8cd026d7c9cf 478 Gene3D G3DSA:1.10.1760.20 94 250 1.5E-7 T 12-10-2018 N288_13450 fa82dd7b1028f7fbf81c8cd026d7c9cf 478 Pfam PF07694 5TMR of 5TMR-LYT 88 230 3.9E-14 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 N288_18460 a44a3bcf855172fb8501dcc7c624ea67 223 Pfam PF01791 DeoC/LacD family aldolase 5 212 3.9E-21 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 N288_18460 a44a3bcf855172fb8501dcc7c624ea67 223 Gene3D G3DSA:3.20.20.70 1 221 2.0E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_18460 a44a3bcf855172fb8501dcc7c624ea67 223 SUPERFAMILY SSF51569 3 217 5.23E-87 T 12-10-2018 N288_18460 a44a3bcf855172fb8501dcc7c624ea67 223 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 3 218 38.462 T 12-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 N288_18460 a44a3bcf855172fb8501dcc7c624ea67 223 PIRSF PIRSF001357 1 221 7.0E-81 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 N288_18460 a44a3bcf855172fb8501dcc7c624ea67 223 SMART SM01133 4 216 1.1E-106 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 N288_18460 a44a3bcf855172fb8501dcc7c624ea67 223 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 5 214 3.7E-95 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 N288_23945 816874b1f098bfcdd23beb5914aa0825 283 Gene3D G3DSA:3.40.50.720 1 188 1.0E-72 T 12-10-2018 N288_23945 816874b1f098bfcdd23beb5914aa0825 283 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 183 4.1E-67 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 N288_23945 816874b1f098bfcdd23beb5914aa0825 283 Gene3D G3DSA:1.10.1040.10 193 278 7.9E-36 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 N288_23945 816874b1f098bfcdd23beb5914aa0825 283 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 208 - T 12-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 N288_23945 816874b1f098bfcdd23beb5914aa0825 283 SUPERFAMILY SSF51735 2 185 2.03E-61 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_23945 816874b1f098bfcdd23beb5914aa0825 283 SUPERFAMILY SSF48179 185 283 1.36E-33 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_23945 816874b1f098bfcdd23beb5914aa0825 283 PIRSF PIRSF000105 1 283 5.2E-93 T 12-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 N288_23945 816874b1f098bfcdd23beb5914aa0825 283 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 2.9E-36 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 N288_00620 03b1d525157ecd0a1f1637306912ce6d 230 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 221 1.1E-72 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 N288_00620 03b1d525157ecd0a1f1637306912ce6d 230 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 223 6.4E-72 T 12-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 N288_00620 03b1d525157ecd0a1f1637306912ce6d 230 SUPERFAMILY SSF53448 3 223 7.66E-60 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_00620 03b1d525157ecd0a1f1637306912ce6d 230 Gene3D G3DSA:3.90.550.10 2 229 9.0E-81 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_00620 03b1d525157ecd0a1f1637306912ce6d 230 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 2 222 41.763 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 N288_12415 40e7e1c38081f0413f70ca17edeb7902 244 Pfam PF08241 Methyltransferase domain 50 144 1.6E-18 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 N288_12415 40e7e1c38081f0413f70ca17edeb7902 244 SUPERFAMILY SSF53335 38 237 9.04E-38 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_12415 40e7e1c38081f0413f70ca17edeb7902 244 Gene3D G3DSA:3.40.50.150 30 243 1.8E-54 T 12-10-2018 N288_16265 3059b45f924fb4de1b8ecc9f3a45a8ca 179 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 6 165 38.131 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 N288_16265 3059b45f924fb4de1b8ecc9f3a45a8ca 179 SUPERFAMILY SSF55068 4 170 3.66E-74 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 N288_16265 3059b45f924fb4de1b8ecc9f3a45a8ca 179 Pfam PF01625 Peptide methionine sulfoxide reductase 8 159 1.2E-62 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 N288_16265 3059b45f924fb4de1b8ecc9f3a45a8ca 179 Gene3D G3DSA:3.30.1060.10 1 166 2.8E-68 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 N288_16265 3059b45f924fb4de1b8ecc9f3a45a8ca 179 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 7 158 1.8E-64 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 N288_04735 f9d6f0d0877dd4d988c1ee43809dfe6a 291 Pfam PF07475 HPr Serine kinase C-terminal domain 118 286 1.1E-61 T 12-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 N288_04735 f9d6f0d0877dd4d988c1ee43809dfe6a 291 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 1 289 7.2E-96 T 12-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 N288_04735 f9d6f0d0877dd4d988c1ee43809dfe6a 291 SUPERFAMILY SSF53795 121 286 3.97E-32 T 12-10-2018 N288_04735 f9d6f0d0877dd4d988c1ee43809dfe6a 291 SUPERFAMILY SSF75138 2 117 1.31E-30 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily N288_04735 f9d6f0d0877dd4d988c1ee43809dfe6a 291 Gene3D G3DSA:3.40.50.300 119 291 1.7E-54 T 12-10-2018 N288_04735 f9d6f0d0877dd4d988c1ee43809dfe6a 291 Gene3D G3DSA:3.40.1390.20 1 118 2.8E-34 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily N288_04735 f9d6f0d0877dd4d988c1ee43809dfe6a 291 Pfam PF02603 HPr Serine kinase N terminus 1 115 1.0E-31 T 12-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 N288_04905 3244b28a393da30a516de17ade2904bc 499 SUPERFAMILY SSF53067 2 249 1.13E-78 T 12-10-2018 N288_04905 3244b28a393da30a516de17ade2904bc 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 257 441 1.8E-34 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 N288_04905 3244b28a393da30a516de17ade2904bc 499 PIRSF PIRSF000538 1 495 5.4E-165 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 N288_04905 3244b28a393da30a516de17ade2904bc 499 TIGRFAM TIGR01312 XylB: xylulokinase 5 484 2.8E-188 T 12-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 N288_04905 3244b28a393da30a516de17ade2904bc 499 SUPERFAMILY SSF53067 249 488 4.19E-66 T 12-10-2018 N288_04905 3244b28a393da30a516de17ade2904bc 499 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 355 375 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 N288_04905 3244b28a393da30a516de17ade2904bc 499 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 132 144 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 N288_04905 3244b28a393da30a516de17ade2904bc 499 Gene3D G3DSA:3.30.420.40 249 491 2.1E-75 T 12-10-2018 N288_04905 3244b28a393da30a516de17ade2904bc 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 247 5.0E-73 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 N288_04905 3244b28a393da30a516de17ade2904bc 499 Gene3D G3DSA:3.30.420.40 1 239 4.7E-86 T 12-10-2018 N288_00345 384cbca6c150c4a26e0c0021fea0d06b 187 Pfam PF01195 Peptidyl-tRNA hydrolase 3 185 1.2E-60 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 N288_00345 384cbca6c150c4a26e0c0021fea0d06b 187 SUPERFAMILY SSF53178 1 185 4.84E-72 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 N288_00345 384cbca6c150c4a26e0c0021fea0d06b 187 Gene3D G3DSA:3.40.50.1470 1 187 1.2E-72 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 N288_00345 384cbca6c150c4a26e0c0021fea0d06b 187 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 N288_00345 384cbca6c150c4a26e0c0021fea0d06b 187 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 N288_00345 384cbca6c150c4a26e0c0021fea0d06b 187 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 185 3.6E-71 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 N288_00345 384cbca6c150c4a26e0c0021fea0d06b 187 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 178 37.896 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 N288_19985 a78421ac5a650a676b34c99ac2e7e478 347 Pfam PF13303 Phosphotransferase system, EIIC 19 335 1.1E-104 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 N288_12650 0fc3282ddc540851279b1d509feaf45f 90 ProDom PD064940 YQHV TRANSMEMBRANE MEMBRANE BH2798 6 89 1.0E-10 T 12-10-2018 IPR020390 Uncharacterised protein family YqhV N288_12650 0fc3282ddc540851279b1d509feaf45f 90 Pfam PF10942 Protein of unknown function (DUF2619) 16 84 6.7E-31 T 12-10-2018 IPR020390 Uncharacterised protein family YqhV N288_17985 31ba1973c0cb8b4c20bcb747255e360f 368 Hamap MF_00259 Aminomethyltransferase [gcvT]. 3 365 50.054 T 12-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 N288_17985 31ba1973c0cb8b4c20bcb747255e360f 368 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 365 2.0E-147 T 12-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 N288_17985 31ba1973c0cb8b4c20bcb747255e360f 368 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 269 358 9.0E-31 T 12-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 N288_17985 31ba1973c0cb8b4c20bcb747255e360f 368 Gene3D G3DSA:3.30.70.1400 53 138 1.7E-92 T 12-10-2018 N288_17985 31ba1973c0cb8b4c20bcb747255e360f 368 Pfam PF01571 Aminomethyltransferase folate-binding domain 9 261 2.6E-96 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain N288_17985 31ba1973c0cb8b4c20bcb747255e360f 368 Gene3D G3DSA:3.30.1360.120 6 238 1.7E-92 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 N288_17985 31ba1973c0cb8b4c20bcb747255e360f 368 Gene3D G3DSA:2.40.30.110 283 365 1.7E-34 T 12-10-2018 N288_17985 31ba1973c0cb8b4c20bcb747255e360f 368 PIRSF PIRSF006487 1 368 1.3E-109 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 N288_17985 31ba1973c0cb8b4c20bcb747255e360f 368 SUPERFAMILY SSF103025 3 284 1.91E-99 T 12-10-2018 N288_17985 31ba1973c0cb8b4c20bcb747255e360f 368 Gene3D G3DSA:4.10.1250.10 239 282 1.2E-17 T 12-10-2018 N288_17985 31ba1973c0cb8b4c20bcb747255e360f 368 SUPERFAMILY SSF101790 276 366 8.01E-29 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal N288_15735 6bd7eb919ffa49fb21634b2d370ca8c5 488 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 436 478 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 N288_15735 6bd7eb919ffa49fb21634b2d370ca8c5 488 SMART SM00342 399 482 3.7E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_15735 6bd7eb919ffa49fb21634b2d370ca8c5 488 SUPERFAMILY SSF52172 16 116 6.97E-7 T 12-10-2018 IPR011006 CheY-like superfamily N288_15735 6bd7eb919ffa49fb21634b2d370ca8c5 488 Pfam PF12833 Helix-turn-helix domain 406 483 1.3E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_15735 6bd7eb919ffa49fb21634b2d370ca8c5 488 Gene3D G3DSA:1.10.10.60 382 487 6.9E-28 T 12-10-2018 N288_15735 6bd7eb919ffa49fb21634b2d370ca8c5 488 SUPERFAMILY SSF46689 435 485 1.88E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_03905 1a85a712adf50548b2079d5244d34017 516 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 336 498 1.6E-50 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 N288_03905 1a85a712adf50548b2079d5244d34017 516 Pfam PF05681 Fumarate hydratase (Fumerase) 8 283 1.1E-71 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 N288_03905 1a85a712adf50548b2079d5244d34017 516 SUPERFAMILY SSF117457 329 498 9.02E-52 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 N288_03905 1a85a712adf50548b2079d5244d34017 516 Pfam PF05683 Fumarase C-terminus 294 499 1.7E-61 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 N288_03905 1a85a712adf50548b2079d5244d34017 516 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 7 281 3.1E-62 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 N288_03905 1a85a712adf50548b2079d5244d34017 516 PIRSF PIRSF001394 1 516 2.3E-194 T 12-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 N288_03905 1a85a712adf50548b2079d5244d34017 516 Gene3D G3DSA:3.20.130.10 314 498 4.0E-65 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 N288_14100 656814d37ea43b126758e5944910a231 537 SUPERFAMILY SSF55729 5 166 1.31E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_14100 656814d37ea43b126758e5944910a231 537 SUPERFAMILY SSF53383 193 526 1.47E-58 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_14100 656814d37ea43b126758e5944910a231 537 Pfam PF00266 Aminotransferase class-V 211 392 4.9E-14 T 12-10-2018 IPR000192 Aminotransferase class V domain N288_14100 656814d37ea43b126758e5944910a231 537 Pfam PF13673 Acetyltransferase (GNAT) domain 38 164 4.2E-8 T 12-10-2018 IPR000182 GNAT domain N288_14100 656814d37ea43b126758e5944910a231 537 Gene3D G3DSA:3.40.640.10 200 433 1.1E-66 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_14100 656814d37ea43b126758e5944910a231 537 Gene3D G3DSA:3.40.630.30 3 165 6.0E-19 T 12-10-2018 N288_14100 656814d37ea43b126758e5944910a231 537 Gene3D G3DSA:3.90.1150.10 192 522 1.1E-66 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_23955 83adeb8fdf8610304a0d15ecdc6386fa 703 SUPERFAMILY SSF46548 260 399 1.74E-19 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 N288_23955 83adeb8fdf8610304a0d15ecdc6386fa 703 Pfam PF02754 Cysteine-rich domain 459 537 2.3E-6 T 12-10-2018 IPR004017 Cysteine-rich domain N288_23955 83adeb8fdf8610304a0d15ecdc6386fa 703 Pfam PF02754 Cysteine-rich domain 581 668 1.7E-17 T 12-10-2018 IPR004017 Cysteine-rich domain N288_23955 83adeb8fdf8610304a0d15ecdc6386fa 703 SUPERFAMILY SSF103501 8 239 3.14E-16 T 12-10-2018 IPR036197 NarG-like superfamily N288_23955 83adeb8fdf8610304a0d15ecdc6386fa 703 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 371 382 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site N288_23955 83adeb8fdf8610304a0d15ecdc6386fa 703 Pfam PF13183 4Fe-4S dicluster domain 274 383 2.5E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain N288_06855 ef6f3d764603144a1af764118c036990 139 Gene3D G3DSA:3.30.428.10 1 139 7.3E-50 T 12-10-2018 IPR036265 HIT-like superfamily N288_06855 ef6f3d764603144a1af764118c036990 139 SUPERFAMILY SSF54197 3 138 2.01E-47 T 12-10-2018 IPR036265 HIT-like superfamily N288_06855 ef6f3d764603144a1af764118c036990 139 PRINTS PR00332 Histidine triad family signature 5 21 8.2E-18 T 12-10-2018 IPR001310 Histidine triad (HIT) protein N288_06855 ef6f3d764603144a1af764118c036990 139 PRINTS PR00332 Histidine triad family signature 93 103 8.2E-18 T 12-10-2018 IPR001310 Histidine triad (HIT) protein N288_06855 ef6f3d764603144a1af764118c036990 139 PRINTS PR00332 Histidine triad family signature 26 44 8.2E-18 T 12-10-2018 IPR001310 Histidine triad (HIT) protein N288_06855 ef6f3d764603144a1af764118c036990 139 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 12-10-2018 IPR019808 Histidine triad, conserved site N288_06855 ef6f3d764603144a1af764118c036990 139 Pfam PF01230 HIT domain 12 106 1.7E-26 T 12-10-2018 IPR001310 Histidine triad (HIT) protein N288_01135 40033d4279ed077243ad1b73818e81c0 55 Pfam PF02416 mttA/Hcf106 family 4 54 8.3E-23 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 N288_01135 40033d4279ed077243ad1b73818e81c0 55 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 53 16.542 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 N288_01135 40033d4279ed077243ad1b73818e81c0 55 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.1E-7 T 12-10-2018 N288_01135 40033d4279ed077243ad1b73818e81c0 55 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.1E-7 T 12-10-2018 N288_01135 40033d4279ed077243ad1b73818e81c0 55 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 46 2.4E-19 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 N288_06850 eff473996c5d1475b07ec35cc86c8f72 359 SUPERFAMILY SSF53383 1 357 3.59E-110 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_06850 eff473996c5d1475b07ec35cc86c8f72 359 Pfam PF00266 Aminotransferase class-V 5 347 5.9E-46 T 12-10-2018 IPR000192 Aminotransferase class V domain N288_06850 eff473996c5d1475b07ec35cc86c8f72 359 Gene3D G3DSA:3.90.1150.10 257 359 5.1E-38 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_06850 eff473996c5d1475b07ec35cc86c8f72 359 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 186 205 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site N288_06850 eff473996c5d1475b07ec35cc86c8f72 359 Gene3D G3DSA:3.40.640.10 16 256 1.3E-83 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_06850 eff473996c5d1475b07ec35cc86c8f72 359 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 358 2.7E-147 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 N288_06850 eff473996c5d1475b07ec35cc86c8f72 359 PIRSF PIRSF000525 1 359 4.1E-145 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 N288_06850 eff473996c5d1475b07ec35cc86c8f72 359 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 359 47.242 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 N288_16855 5969710431229edb9c98a172ae70f31f 396 Pfam PF00155 Aminotransferase class I and II 33 387 4.4E-79 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 N288_16855 5969710431229edb9c98a172ae70f31f 396 Gene3D G3DSA:3.40.640.10 64 286 2.5E-138 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_16855 5969710431229edb9c98a172ae70f31f 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 N288_16855 5969710431229edb9c98a172ae70f31f 396 SUPERFAMILY SSF53383 4 392 1.61E-113 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_16855 5969710431229edb9c98a172ae70f31f 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 230 254 1.1E-14 T 12-10-2018 N288_16855 5969710431229edb9c98a172ae70f31f 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 163 187 1.1E-14 T 12-10-2018 N288_16855 5969710431229edb9c98a172ae70f31f 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 116 137 1.1E-14 T 12-10-2018 N288_16855 5969710431229edb9c98a172ae70f31f 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 199 222 1.1E-14 T 12-10-2018 N288_16855 5969710431229edb9c98a172ae70f31f 396 Gene3D G3DSA:3.90.1150.10 27 387 2.5E-138 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_12890 629481d5351e2c1a791020d7b38be850 192 Gene3D G3DSA:3.90.45.10 2 188 2.0E-61 T 12-10-2018 IPR036821 Peptide deformylase superfamily N288_12890 629481d5351e2c1a791020d7b38be850 192 SUPERFAMILY SSF56420 7 181 1.05E-55 T 12-10-2018 IPR036821 Peptide deformylase superfamily N288_12890 629481d5351e2c1a791020d7b38be850 192 PRINTS PR01576 Peptide deformylase signature 115 126 2.3E-28 T 12-10-2018 IPR023635 Peptide deformylase N288_12890 629481d5351e2c1a791020d7b38be850 192 PRINTS PR01576 Peptide deformylase signature 147 176 2.3E-28 T 12-10-2018 IPR023635 Peptide deformylase N288_12890 629481d5351e2c1a791020d7b38be850 192 PRINTS PR01576 Peptide deformylase signature 128 146 2.3E-28 T 12-10-2018 IPR023635 Peptide deformylase N288_12890 629481d5351e2c1a791020d7b38be850 192 PRINTS PR01576 Peptide deformylase signature 54 83 2.3E-28 T 12-10-2018 IPR023635 Peptide deformylase N288_12890 629481d5351e2c1a791020d7b38be850 192 Hamap MF_00163 Peptide deformylase [def]. 10 189 26.191 T 12-10-2018 IPR023635 Peptide deformylase N288_12890 629481d5351e2c1a791020d7b38be850 192 PIRSF PIRSF004749 1 190 2.6E-44 T 12-10-2018 IPR023635 Peptide deformylase N288_12890 629481d5351e2c1a791020d7b38be850 192 Pfam PF01327 Polypeptide deformylase 11 178 8.1E-44 T 12-10-2018 IPR023635 Peptide deformylase N288_12890 629481d5351e2c1a791020d7b38be850 192 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 12 182 1.1E-42 T 12-10-2018 IPR023635 Peptide deformylase N288_20775 8da249da7757dc83b08c68eb19c7d10d 113 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 107 1.7E-32 T 12-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like N288_09320 8a2980ec8efb3a7b4e0449c7c5ec187b 485 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 386 406 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 N288_09320 8a2980ec8efb3a7b4e0449c7c5ec187b 485 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 64 462 1.1E-129 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 N288_09320 8a2980ec8efb3a7b4e0449c7c5ec187b 485 Pfam PF00860 Permease family 67 439 6.6E-108 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 N288_11365 643198c06174657f1fbce3e50101c0c4 318 Gene3D G3DSA:3.40.50.720 3 304 1.4E-119 T 12-10-2018 N288_11365 643198c06174657f1fbce3e50101c0c4 318 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 311 1.5E-138 T 12-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 N288_11365 643198c06174657f1fbce3e50101c0c4 318 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 304 2.4E-78 T 12-10-2018 IPR016040 NAD(P)-binding domain N288_11365 643198c06174657f1fbce3e50101c0c4 318 SUPERFAMILY SSF51735 1 314 6.56E-90 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_11365 643198c06174657f1fbce3e50101c0c4 318 Gene3D G3DSA:3.90.25.10 191 311 1.4E-119 T 12-10-2018 N288_01715 a486bc56cfd49c23b8408138be8d2acb 428 SMART SM01209 102 294 6.2E-128 T 12-10-2018 N288_01715 a486bc56cfd49c23b8408138be8d2acb 428 Gene3D G3DSA:3.90.600.10 326 427 8.3E-32 T 12-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 N288_01715 a486bc56cfd49c23b8408138be8d2acb 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 2 419 42.032 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 N288_01715 a486bc56cfd49c23b8408138be8d2acb 428 SUPERFAMILY SSF51246 325 419 2.9E-27 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 N288_01715 a486bc56cfd49c23b8408138be8d2acb 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 288 295 - T 12-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 N288_01715 a486bc56cfd49c23b8408138be8d2acb 428 Gene3D G3DSA:3.30.1490.20 120 189 1.4E-27 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 N288_01715 a486bc56cfd49c23b8408138be8d2acb 428 Gene3D G3DSA:3.40.50.20 3 94 1.8E-32 T 12-10-2018 N288_01715 a486bc56cfd49c23b8408138be8d2acb 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 3 101 1.1E-30 T 12-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 N288_01715 a486bc56cfd49c23b8408138be8d2acb 428 SUPERFAMILY SSF56059 103 321 7.07E-62 T 12-10-2018 N288_01715 a486bc56cfd49c23b8408138be8d2acb 428 SUPERFAMILY SSF52440 2 102 8.06E-32 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily N288_01715 a486bc56cfd49c23b8408138be8d2acb 428 SMART SM01210 326 419 2.2E-43 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 N288_01715 a486bc56cfd49c23b8408138be8d2acb 428 Gene3D G3DSA:3.30.470.20 190 325 1.1E-55 T 12-10-2018 N288_01715 a486bc56cfd49c23b8408138be8d2acb 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 102 294 2.7E-79 T 12-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 N288_01715 a486bc56cfd49c23b8408138be8d2acb 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 3 419 3.5E-159 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 N288_01715 a486bc56cfd49c23b8408138be8d2acb 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 328 416 2.1E-25 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 N288_21955 31abbafdc03e8d20494d04941370ebde 280 SUPERFAMILY SSF56235 1 216 8.49E-76 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_21955 31abbafdc03e8d20494d04941370ebde 280 Pfam PF08823 Putative peptidoglycan binding domain 206 276 8.9E-16 T 12-10-2018 IPR014927 Putative peptidoglycan binding N288_21955 31abbafdc03e8d20494d04941370ebde 280 Pfam PF06267 Family of unknown function (DUF1028) 2 196 2.2E-80 T 12-10-2018 IPR010430 Protein of unknown function DUF1028 N288_21955 31abbafdc03e8d20494d04941370ebde 280 Gene3D G3DSA:3.60.20.10 1 214 8.7E-83 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_14770 d61caa82bb0b13b33e6cef20d537de62 484 Pfam PF05893 Acyl-CoA reductase (LuxC) 59 464 1.8E-110 T 12-10-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 N288_14770 d61caa82bb0b13b33e6cef20d537de62 484 PIRSF PIRSF009414 1 484 3.0E-109 T 12-10-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 N288_03605 ee47e338c565c4f3f509fb2a0e3d7542 269 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 3 58 1.1E-22 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain N288_03605 ee47e338c565c4f3f509fb2a0e3d7542 269 Gene3D G3DSA:3.30.1330.60 79 269 7.5E-46 T 12-10-2018 IPR036737 OmpA-like domain superfamily N288_03605 ee47e338c565c4f3f509fb2a0e3d7542 269 Pfam PF00691 OmpA family 159 259 2.5E-13 T 12-10-2018 IPR006665 OmpA-like domain N288_03605 ee47e338c565c4f3f509fb2a0e3d7542 269 SUPERFAMILY SSF103088 146 267 9.29E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily N288_09350 66a619a8de14b548c3358a7bac7b0198 313 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 302 2.4E-124 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 N288_09350 66a619a8de14b548c3358a7bac7b0198 313 SUPERFAMILY SSF51395 2 300 1.7E-89 T 12-10-2018 N288_09350 66a619a8de14b548c3358a7bac7b0198 313 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 301 41.908 T 12-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 N288_09350 66a619a8de14b548c3358a7bac7b0198 313 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 40 59 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 N288_09350 66a619a8de14b548c3358a7bac7b0198 313 PIRSF PIRSF000164 1 302 6.6E-87 T 12-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 N288_09350 66a619a8de14b548c3358a7bac7b0198 313 Gene3D G3DSA:3.20.20.70 2 301 1.2E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_09350 66a619a8de14b548c3358a7bac7b0198 313 Pfam PF01180 Dihydroorotate dehydrogenase 3 286 2.5E-93 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 N288_09350 66a619a8de14b548c3358a7bac7b0198 313 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 239 259 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 N288_01350 5566fa22833106fadd7f5d091666b214 135 Pfam PF16291 Domain of unknown function (DUF4937 2 91 2.0E-32 T 12-10-2018 IPR032555 Domain of unknown function DUF4937 N288_01350 5566fa22833106fadd7f5d091666b214 135 SUPERFAMILY SSF54909 1 68 2.68E-8 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel N288_01385 9135f2817acb729223522bf5578f2b10 419 Pfam PF13416 Bacterial extracellular solute-binding protein 61 357 6.5E-43 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein N288_01385 9135f2817acb729223522bf5578f2b10 419 Gene3D G3DSA:3.40.190.10 24 417 8.7E-90 T 12-10-2018 N288_01385 9135f2817acb729223522bf5578f2b10 419 SUPERFAMILY SSF53850 41 413 3.95E-83 T 12-10-2018 N288_15255 e809d66685f5a2a59d66e79257484a5f 296 Gene3D G3DSA:3.40.50.10790 2 164 8.8E-50 T 12-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal N288_15255 e809d66685f5a2a59d66e79257484a5f 296 SUPERFAMILY SSF102522 4 162 1.96E-52 T 12-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal N288_15255 e809d66685f5a2a59d66e79257484a5f 296 SUPERFAMILY SSF101852 172 275 9.55E-25 T 12-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal N288_15255 e809d66685f5a2a59d66e79257484a5f 296 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 6 272 1.7E-72 T 12-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase N288_15255 e809d66685f5a2a59d66e79257484a5f 296 PIRSF PIRSF006779 1 277 2.8E-87 T 12-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase N288_15255 e809d66685f5a2a59d66e79257484a5f 296 Gene3D G3DSA:2.40.30.90 169 285 1.9E-28 T 12-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal N288_06490 7b6437c60580ad09e8b2b45e2687f90a 180 Gene3D G3DSA:3.40.630.30 2 177 2.8E-49 T 12-10-2018 N288_06490 7b6437c60580ad09e8b2b45e2687f90a 180 SUPERFAMILY SSF55729 6 174 1.58E-44 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_06490 7b6437c60580ad09e8b2b45e2687f90a 180 Pfam PF13302 Acetyltransferase (GNAT) domain 11 150 1.7E-22 T 12-10-2018 IPR000182 GNAT domain N288_04155 98f0db61547bb801e1e59eac4f1fcea6 297 Gene3D G3DSA:1.10.287.130 46 145 2.0E-18 T 12-10-2018 N288_04155 98f0db61547bb801e1e59eac4f1fcea6 297 PRINTS PR00344 Bacterial sensor protein C-terminal signature 261 279 6.3E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_04155 98f0db61547bb801e1e59eac4f1fcea6 297 PRINTS PR00344 Bacterial sensor protein C-terminal signature 246 256 6.3E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_04155 98f0db61547bb801e1e59eac4f1fcea6 297 SMART SM00387 193 297 2.2E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_04155 98f0db61547bb801e1e59eac4f1fcea6 297 SMART SM00388 81 147 2.1E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_04155 98f0db61547bb801e1e59eac4f1fcea6 297 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 194 284 6.0E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_04155 98f0db61547bb801e1e59eac4f1fcea6 297 SUPERFAMILY SSF55874 149 284 3.14E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_04155 98f0db61547bb801e1e59eac4f1fcea6 297 Pfam PF00512 His Kinase A (phospho-acceptor) domain 82 146 3.8E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_04155 98f0db61547bb801e1e59eac4f1fcea6 297 SUPERFAMILY SSF47384 77 146 9.22E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_04155 98f0db61547bb801e1e59eac4f1fcea6 297 Gene3D G3DSA:3.30.565.10 152 294 6.4E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_00785 40ad17997e52d3de98a4492d92607dd7 67 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.203 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00785 40ad17997e52d3de98a4492d92607dd7 67 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 6.0E-25 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00785 40ad17997e52d3de98a4492d92607dd7 67 SUPERFAMILY SSF46561 1 64 1.57E-24 T 12-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00785 40ad17997e52d3de98a4492d92607dd7 67 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 12-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00785 40ad17997e52d3de98a4492d92607dd7 67 Gene3D G3DSA:1.10.287.310 1 66 1.9E-31 T 12-10-2018 N288_00785 40ad17997e52d3de98a4492d92607dd7 67 Pfam PF00831 Ribosomal L29 protein 4 60 1.4E-26 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_05940 62b49b307562dc00750299357b539fb9 376 Pfam PF08331 Domain of unknown function (DUF1730) 57 135 5.5E-16 T 12-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 N288_05940 62b49b307562dc00750299357b539fb9 376 SUPERFAMILY SSF48371 286 374 8.06E-12 T 12-10-2018 IPR016024 Armadillo-type fold N288_05940 62b49b307562dc00750299357b539fb9 376 SMART SM00567 E-Z type HEAT repeats 298 327 98.0 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 N288_05940 62b49b307562dc00750299357b539fb9 376 SMART SM00567 E-Z type HEAT repeats 330 359 0.15 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 N288_05940 62b49b307562dc00750299357b539fb9 376 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site N288_05940 62b49b307562dc00750299357b539fb9 376 SUPERFAMILY SSF54862 164 277 5.86E-17 T 12-10-2018 N288_05940 62b49b307562dc00750299357b539fb9 376 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 342 1.9E-128 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 N288_05940 62b49b307562dc00750299357b539fb9 376 Pfam PF13646 HEAT repeats 300 370 1.3E-11 T 12-10-2018 N288_05940 62b49b307562dc00750299357b539fb9 376 Pfam PF13484 4Fe-4S double cluster binding domain 188 250 2.7E-16 T 12-10-2018 N288_05940 62b49b307562dc00750299357b539fb9 376 Gene3D G3DSA:3.30.70.20 183 251 3.5E-5 T 12-10-2018 N288_05940 62b49b307562dc00750299357b539fb9 376 Gene3D G3DSA:1.25.10.10 263 376 1.8E-11 T 12-10-2018 IPR011989 Armadillo-like helical N288_05230 b37a009f2fa29aa79e81318df9b93376 244 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 73 1.5E-13 T 12-10-2018 N288_05230 b37a009f2fa29aa79e81318df9b93376 244 Gene3D G3DSA:3.50.50.60 3 90 2.7E-19 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_05230 b37a009f2fa29aa79e81318df9b93376 244 SUPERFAMILY SSF51905 2 220 1.86E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_14075 fea55dba7eaac23a41a1734487a00989 371 Gene3D G3DSA:3.40.710.10 38 347 8.8E-44 T 12-10-2018 N288_14075 fea55dba7eaac23a41a1734487a00989 371 Pfam PF13354 Beta-lactamase enzyme family 59 278 1.5E-20 T 12-10-2018 N288_14075 fea55dba7eaac23a41a1734487a00989 371 SUPERFAMILY SSF56601 45 335 2.97E-26 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_22420 aafdeffe2f52916adb58605483e7e7ff 513 Pfam PF03806 AbgT putative transporter family 20 509 5.3E-185 T 12-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 N288_10080 5d27d6fbbcc86be5475291d1bcd945c5 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 326 3.8E-46 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 N288_14535 d0424e225f358bdbcf21ff7878206142 180 Gene3D G3DSA:3.40.630.30 1 167 7.4E-50 T 12-10-2018 N288_14535 d0424e225f358bdbcf21ff7878206142 180 Pfam PF13302 Acetyltransferase (GNAT) domain 7 140 1.7E-27 T 12-10-2018 IPR000182 GNAT domain N288_14535 d0424e225f358bdbcf21ff7878206142 180 SUPERFAMILY SSF55729 1 164 1.08E-45 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_02830 1d7e648c4a5473da00f82a94760cd201 373 SUPERFAMILY SSF55874 244 367 1.83E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_02830 1d7e648c4a5473da00f82a94760cd201 373 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 325 9.2E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_02830 1d7e648c4a5473da00f82a94760cd201 373 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 347 9.2E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_02830 1d7e648c4a5473da00f82a94760cd201 373 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 366 9.2E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_02830 1d7e648c4a5473da00f82a94760cd201 373 Gene3D G3DSA:3.30.565.10 240 367 5.8E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_02830 1d7e648c4a5473da00f82a94760cd201 373 SMART SM00387 275 369 3.1E-5 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_02830 1d7e648c4a5473da00f82a94760cd201 373 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 278 367 1.2E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_02830 1d7e648c4a5473da00f82a94760cd201 373 Pfam PF07730 Histidine kinase 176 238 3.7E-17 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 N288_17570 54158d2a7d526217ad38ed4176a80a77 111 Pfam PF08863 YolD-like protein 14 106 1.1E-27 T 12-10-2018 IPR014962 YolD-like protein N288_22465 ac6e67aee8dc9ee549079bd743d4d186 333 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 40 294 6.2E-70 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 N288_22465 ac6e67aee8dc9ee549079bd743d4d186 333 PIRSF PIRSF006470 5 333 1.3E-78 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 N288_22465 ac6e67aee8dc9ee549079bd743d4d186 333 SUPERFAMILY SSF53850 57 282 1.88E-5 T 12-10-2018 N288_22465 ac6e67aee8dc9ee549079bd743d4d186 333 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 316 1.7E-81 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 N288_22465 ac6e67aee8dc9ee549079bd743d4d186 333 Gene3D G3DSA:3.40.190.170 24 332 2.2E-96 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily N288_20630 2bec14ce01dd0c0e1f3ba0437a89d92b 328 SUPERFAMILY SSF55347 126 291 7.19E-29 T 12-10-2018 N288_20630 2bec14ce01dd0c0e1f3ba0437a89d92b 328 Gene3D G3DSA:3.40.50.720 1 133 1.8E-39 T 12-10-2018 N288_20630 2bec14ce01dd0c0e1f3ba0437a89d92b 328 SUPERFAMILY SSF51735 2 152 2.9E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_20630 2bec14ce01dd0c0e1f3ba0437a89d92b 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 6.5E-26 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 N288_20630 2bec14ce01dd0c0e1f3ba0437a89d92b 328 Gene3D G3DSA:3.30.360.10 134 327 5.6E-63 T 12-10-2018 N288_22250 767b829d31eea2430c3bde52c27cca24 286 SUPERFAMILY SSF51695 26 279 1.1E-75 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 N288_22250 767b829d31eea2430c3bde52c27cca24 286 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 32 274 2.1E-56 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 N288_22250 767b829d31eea2430c3bde52c27cca24 286 Gene3D G3DSA:3.20.20.190 15 285 5.9E-103 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 N288_08635 5af3fd91c7d5449b4c3ef4861d1df7bf 247 Gene3D G3DSA:3.90.70.10 50 247 9.7E-65 T 12-10-2018 N288_08635 5af3fd91c7d5449b4c3ef4861d1df7bf 247 PIRSF PIRSF032442 2 247 8.0E-68 T 12-10-2018 IPR016997 Uncharacterised conserved protein UCP032442 N288_08635 5af3fd91c7d5449b4c3ef4861d1df7bf 247 Pfam PF13529 Peptidase_C39 like family 55 218 1.3E-33 T 12-10-2018 IPR039564 Peptidase C39-like N288_03850 b0a90f9e2a0c6792c59f6af7edee1ba2 337 Gene3D G3DSA:3.90.180.10 8 318 2.0E-87 T 12-10-2018 N288_03850 b0a90f9e2a0c6792c59f6af7edee1ba2 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 104 1.2E-7 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 N288_03850 b0a90f9e2a0c6792c59f6af7edee1ba2 337 SUPERFAMILY SSF50129 1 161 4.11E-31 T 12-10-2018 IPR011032 GroES-like superfamily N288_03850 b0a90f9e2a0c6792c59f6af7edee1ba2 337 Pfam PF13602 Zinc-binding dehydrogenase 196 320 3.1E-21 T 12-10-2018 N288_03850 b0a90f9e2a0c6792c59f6af7edee1ba2 337 Gene3D G3DSA:3.40.50.720 138 271 2.0E-87 T 12-10-2018 N288_03850 b0a90f9e2a0c6792c59f6af7edee1ba2 337 SMART SM00829 10 320 9.2E-12 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 N288_03850 b0a90f9e2a0c6792c59f6af7edee1ba2 337 SUPERFAMILY SSF51735 127 297 1.71E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_10910 b7ae2047652d387c7a1db021c5d61d6c 292 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.5E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_10910 b7ae2047652d387c7a1db021c5d61d6c 292 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.5E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_10910 b7ae2047652d387c7a1db021c5d61d6c 292 Gene3D G3DSA:1.10.357.10 1 175 7.3E-29 T 12-10-2018 N288_10910 b7ae2047652d387c7a1db021c5d61d6c 292 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 8.1E-18 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_10910 b7ae2047652d387c7a1db021c5d61d6c 292 ProSitePatterns PS01081 TetR-type HTH domain signature. 19 50 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site N288_10910 b7ae2047652d387c7a1db021c5d61d6c 292 SUPERFAMILY SSF46689 3 67 5.99E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_06020 c0ca6737379dc7896cd2c78d3b0e29db 230 Pfam PF07556 Protein of unknown function (DUF1538) 20 226 1.7E-71 T 12-10-2018 IPR011435 Protein of unknown function DUF1538 N288_06635 da59c49d0fee082221b2b0f2695d0dfe 86 Pfam PF02583 Metal-sensitive transcriptional repressor 5 83 1.8E-26 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 N288_06635 da59c49d0fee082221b2b0f2695d0dfe 86 Gene3D G3DSA:1.20.58.1000 1 85 1.4E-25 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily N288_21610 c814cd28abf7b0e350ffeb09114fad45 340 Gene3D G3DSA:1.10.10.10 19 89 5.8E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_21610 c814cd28abf7b0e350ffeb09114fad45 340 SUPERFAMILY SSF100950 91 338 1.84E-68 T 12-10-2018 IPR037171 NagB/RpiA transferase-like N288_21610 c814cd28abf7b0e350ffeb09114fad45 340 SUPERFAMILY SSF46785 19 84 6.82E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_21610 c814cd28abf7b0e350ffeb09114fad45 340 Pfam PF04198 Putative sugar-binding domain 91 339 1.4E-69 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 N288_21610 c814cd28abf7b0e350ffeb09114fad45 340 Gene3D G3DSA:3.40.50.1360 90 340 3.4E-80 T 12-10-2018 N288_08575 ff4977538d5122f9d3adf6c6f4fa73c0 156 SUPERFAMILY SSF109854 3 149 7.17E-20 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_08575 ff4977538d5122f9d3adf6c6f4fa73c0 156 Gene3D G3DSA:1.20.120.450 1 155 7.2E-25 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_08575 ff4977538d5122f9d3adf6c6f4fa73c0 156 Pfam PF12867 DinB superfamily 19 147 3.2E-12 T 12-10-2018 IPR024775 DinB-like domain N288_07400 ea5ef8755a0aac287c2b9f756730dfd2 168 SUPERFAMILY SSF55729 2 164 1.22E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_07400 ea5ef8755a0aac287c2b9f756730dfd2 168 Gene3D G3DSA:3.40.630.30 1 167 3.2E-39 T 12-10-2018 N288_07400 ea5ef8755a0aac287c2b9f756730dfd2 168 Pfam PF00583 Acetyltransferase (GNAT) family 31 140 2.5E-17 T 12-10-2018 IPR000182 GNAT domain N288_02000 9e427ca45f98f5ba04e9fc81482012b2 224 Pfam PF00881 Nitroreductase family 17 204 1.7E-27 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 N288_02000 9e427ca45f98f5ba04e9fc81482012b2 224 SUPERFAMILY SSF55469 10 221 1.15E-57 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 N288_02000 9e427ca45f98f5ba04e9fc81482012b2 224 Gene3D G3DSA:3.40.109.10 7 223 3.7E-61 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 N288_10005 9832cddf7778e14beb6cab713db85088 302 Gene3D G3DSA:3.40.50.720 7 285 8.7E-106 T 12-10-2018 N288_10005 9832cddf7778e14beb6cab713db85088 302 SUPERFAMILY SSF51735 133 269 1.65E-18 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_10005 9832cddf7778e14beb6cab713db85088 302 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 151 290 1.7E-9 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain N288_10005 9832cddf7778e14beb6cab713db85088 302 TIGRFAM TIGR02853 spore_dpaA: dipicolinic acid synthetase, A subunit 4 289 3.8E-138 T 12-10-2018 IPR014215 Dipicolinic acid synthetase subunit A N288_10005 9832cddf7778e14beb6cab713db85088 302 Pfam PF16924 Dipicolinate synthase subunit A N-terminal domain 6 123 7.6E-30 T 12-10-2018 IPR031629 Dipicolinate synthase subunit A, N-terminal N288_10005 9832cddf7778e14beb6cab713db85088 302 Gene3D G3DSA:3.40.50.720 126 272 8.7E-106 T 12-10-2018 N288_23915 07a75305a6db844ef519c04ae101c311 188 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 186 15.577 T 12-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 N288_23915 07a75305a6db844ef519c04ae101c311 188 Gene3D G3DSA:1.10.10.1250 2 82 1.1E-32 T 12-10-2018 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily N288_23915 07a75305a6db844ef519c04ae101c311 188 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 14 81 1.7E-10 T 12-10-2018 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 N288_23915 07a75305a6db844ef519c04ae101c311 188 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 12 92 3.1E-34 T 12-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 N288_11340 d1354ebb1e9adbeb7f56755d47874e2e 312 SUPERFAMILY SSF51735 5 296 1.85E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_11340 d1354ebb1e9adbeb7f56755d47874e2e 312 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 227 5.3E-40 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 N288_11340 d1354ebb1e9adbeb7f56755d47874e2e 312 Gene3D G3DSA:3.90.25.10 168 284 5.6E-60 T 12-10-2018 N288_11340 d1354ebb1e9adbeb7f56755d47874e2e 312 Gene3D G3DSA:3.40.50.720 7 279 5.6E-60 T 12-10-2018 N288_21745 611e5d532abe290d3a6e6d3f3a344940 391 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 3 382 1.1E-130 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 N288_21745 611e5d532abe290d3a6e6d3f3a344940 391 Gene3D G3DSA:2.30.40.10 11 383 9.9E-153 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_21745 611e5d532abe290d3a6e6d3f3a344940 391 Pfam PF01979 Amidohydrolase family 56 383 7.7E-36 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 N288_21745 611e5d532abe290d3a6e6d3f3a344940 391 SUPERFAMILY SSF51556 59 355 8.66E-105 T 12-10-2018 IPR032466 Metal-dependent hydrolase N288_21745 611e5d532abe290d3a6e6d3f3a344940 391 SUPERFAMILY SSF51338 3 386 7.57E-18 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_21745 611e5d532abe290d3a6e6d3f3a344940 391 PIRSF PIRSF038994 2 388 2.5E-141 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 N288_21745 611e5d532abe290d3a6e6d3f3a344940 391 Gene3D G3DSA:3.20.20.140 59 355 9.9E-153 T 12-10-2018 N288_22755 7cb83255c7856edd10c7580e6ce42935 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 6.0E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22755 7cb83255c7856edd10c7580e6ce42935 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 247 6.0E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22755 7cb83255c7856edd10c7580e6ce42935 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 6.0E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22755 7cb83255c7856edd10c7580e6ce42935 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.0E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22755 7cb83255c7856edd10c7580e6ce42935 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 6.0E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22755 7cb83255c7856edd10c7580e6ce42935 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 6.0E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22755 7cb83255c7856edd10c7580e6ce42935 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 6.7E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22755 7cb83255c7856edd10c7580e6ce42935 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.7E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22755 7cb83255c7856edd10c7580e6ce42935 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 6.7E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22755 7cb83255c7856edd10c7580e6ce42935 266 Gene3D G3DSA:3.40.50.720 4 265 8.9E-77 T 12-10-2018 N288_22755 7cb83255c7856edd10c7580e6ce42935 266 Pfam PF00106 short chain dehydrogenase 11 199 7.0E-57 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_22755 7cb83255c7856edd10c7580e6ce42935 266 SUPERFAMILY SSF51735 9 263 3.04E-74 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_22755 7cb83255c7856edd10c7580e6ce42935 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_01255 e9af6a3554b3c0b5de91991c2d624f00 562 SMART SM01016 10 85 2.8E-15 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 N288_01255 e9af6a3554b3c0b5de91991c2d624f00 562 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 85 1.5E-13 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 N288_01255 e9af6a3554b3c0b5de91991c2d624f00 562 Pfam PF00750 tRNA synthetases class I (R) 96 436 1.4E-92 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 N288_01255 e9af6a3554b3c0b5de91991c2d624f00 562 SMART SM00836 451 562 2.2E-30 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 N288_01255 e9af6a3554b3c0b5de91991c2d624f00 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 115 130 3.6E-20 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 N288_01255 e9af6a3554b3c0b5de91991c2d624f00 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 130 146 3.6E-20 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 N288_01255 e9af6a3554b3c0b5de91991c2d624f00 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 154 167 3.6E-20 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 N288_01255 e9af6a3554b3c0b5de91991c2d624f00 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 298 319 3.6E-20 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 N288_01255 e9af6a3554b3c0b5de91991c2d624f00 562 SUPERFAMILY SSF55190 4 106 1.07E-17 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 N288_01255 e9af6a3554b3c0b5de91991c2d624f00 562 Gene3D G3DSA:1.10.730.10 445 562 7.7E-29 T 12-10-2018 N288_01255 e9af6a3554b3c0b5de91991c2d624f00 562 Gene3D G3DSA:3.30.1360.70 4 106 4.6E-22 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 N288_01255 e9af6a3554b3c0b5de91991c2d624f00 562 SUPERFAMILY SSF47323 445 562 1.57E-28 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_01255 e9af6a3554b3c0b5de91991c2d624f00 562 Hamap MF_00123 Arginine--tRNA ligase [argS]. 2 562 24.441 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 N288_01255 e9af6a3554b3c0b5de91991c2d624f00 562 Pfam PF05746 DALR anticodon binding domain 451 562 6.7E-25 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 N288_01255 e9af6a3554b3c0b5de91991c2d624f00 562 SUPERFAMILY SSF52374 110 445 3.85E-97 T 12-10-2018 N288_01255 e9af6a3554b3c0b5de91991c2d624f00 562 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 9 562 2.1E-138 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 N288_01255 e9af6a3554b3c0b5de91991c2d624f00 562 Gene3D G3DSA:3.40.50.620 108 444 8.4E-122 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_21205 a9d187859678d5b76bea72f81516d7de 594 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 253 415 4.4E-35 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 N288_21205 a9d187859678d5b76bea72f81516d7de 594 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 378 397 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 N288_21205 a9d187859678d5b76bea72f81516d7de 594 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 149 161 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 N288_21205 a9d187859678d5b76bea72f81516d7de 594 Gene3D G3DSA:1.10.540.10 1 145 2.9E-46 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 N288_21205 a9d187859678d5b76bea72f81516d7de 594 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 31 143 1.5E-29 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 N288_21205 a9d187859678d5b76bea72f81516d7de 594 Gene3D G3DSA:1.20.140.10 252 422 1.4E-51 T 12-10-2018 N288_21205 a9d187859678d5b76bea72f81516d7de 594 SUPERFAMILY SSF56645 22 263 2.75E-73 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 N288_21205 a9d187859678d5b76bea72f81516d7de 594 Gene3D G3DSA:1.20.140.10 423 594 2.5E-59 T 12-10-2018 N288_21205 a9d187859678d5b76bea72f81516d7de 594 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 147 239 2.0E-22 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 N288_21205 a9d187859678d5b76bea72f81516d7de 594 SUPERFAMILY SSF47203 257 422 1.06E-43 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 N288_21205 a9d187859678d5b76bea72f81516d7de 594 Gene3D G3DSA:2.40.110.10 146 251 2.1E-35 T 12-10-2018 N288_10675 cc40a02ef303da574fc8133602d3b714 466 Pfam PF00155 Aminotransferase class I and II 104 403 6.2E-26 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 N288_10675 cc40a02ef303da574fc8133602d3b714 466 SUPERFAMILY SSF53383 98 463 1.73E-89 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_10675 cc40a02ef303da574fc8133602d3b714 466 SUPERFAMILY SSF46785 6 83 1.91E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_10675 cc40a02ef303da574fc8133602d3b714 466 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 4.7E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_10675 cc40a02ef303da574fc8133602d3b714 466 Gene3D G3DSA:1.10.10.10 1 77 1.2E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_10675 cc40a02ef303da574fc8133602d3b714 466 SMART SM00345 17 76 2.6E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 N288_10675 cc40a02ef303da574fc8133602d3b714 466 Gene3D G3DSA:3.40.640.10 90 455 3.1E-122 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_08840 9119f8527545a4f3c33d74d1e955e2c3 489 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 221 235 - T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 N288_08840 9119f8527545a4f3c33d74d1e955e2c3 489 Gene3D G3DSA:3.90.105.10 419 475 2.3E-18 T 12-10-2018 N288_08840 9119f8527545a4f3c33d74d1e955e2c3 489 SUPERFAMILY SSF55904 341 487 4.58E-38 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 N288_08840 9119f8527545a4f3c33d74d1e955e2c3 489 SUPERFAMILY SSF53383 6 382 1.29E-100 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_08840 9119f8527545a4f3c33d74d1e955e2c3 489 Gene3D G3DSA:3.40.640.10 6 283 6.7E-97 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_08840 9119f8527545a4f3c33d74d1e955e2c3 489 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 6 370 6.6E-116 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 N288_08840 9119f8527545a4f3c33d74d1e955e2c3 489 Gene3D G3DSA:3.90.1150.10 312 404 6.9E-6 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_08840 9119f8527545a4f3c33d74d1e955e2c3 489 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 398 460 7.6E-11 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 SUPERFAMILY SSF88659 271 372 3.36E-30 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 SUPERFAMILY SSF88946 102 211 1.44E-54 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 SUPERFAMILY SSF88659 214 287 3.11E-23 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 Pfam PF03979 Sigma-70 factor, region 1.1 16 78 5.6E-15 T 12-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 Gene3D G3DSA:1.10.10.10 214 289 5.4E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 137 362 5.0E-40 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 Gene3D G3DSA:1.10.601.10 136 213 4.8E-51 T 12-10-2018 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 Gene3D G3DSA:1.10.601.10 101 135 1.1E-11 T 12-10-2018 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 Gene3D G3DSA:1.10.220.120 16 76 4.5E-8 T 12-10-2018 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 PRINTS PR00046 Major sigma-70 factor signature 165 178 3.1E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 PRINTS PR00046 Major sigma-70 factor signature 349 360 3.1E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 PRINTS PR00046 Major sigma-70 factor signature 313 325 3.1E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 PRINTS PR00046 Major sigma-70 factor signature 189 197 3.1E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 PRINTS PR00046 Major sigma-70 factor signature 334 349 3.1E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 Gene3D G3DSA:1.10.10.10 302 374 2.8E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 137 373 1.1E-125 T 12-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 334 360 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 Pfam PF04542 Sigma-70 region 2 141 210 4.0E-22 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 Pfam PF04539 Sigma-70 region 3 220 296 4.0E-33 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 Pfam PF00140 Sigma-70 factor, region 1.2 103 136 6.5E-18 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 9 374 34.267 T 12-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 Pfam PF04545 Sigma-70, region 4 309 362 5.2E-20 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 N288_18345 65cd687777f1ba9f5ad241ac5405608c 374 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 165 178 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_07580 5a3a60c70d52b515f0b22f9b9c47428f 337 SUPERFAMILY SSF52540 20 270 6.02E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_07580 5a3a60c70d52b515f0b22f9b9c47428f 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 250 315 4.0E-19 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_07580 5a3a60c70d52b515f0b22f9b9c47428f 337 ProSitePatterns PS00211 ABC transporters family signature. 171 185 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_07580 5a3a60c70d52b515f0b22f9b9c47428f 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 249 335 5.3E-30 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_07580 5a3a60c70d52b515f0b22f9b9c47428f 337 Gene3D G3DSA:3.40.50.300 18 337 1.5E-105 T 12-10-2018 N288_07580 5a3a60c70d52b515f0b22f9b9c47428f 337 SMART SM00382 56 248 1.7E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_07580 5a3a60c70d52b515f0b22f9b9c47428f 337 Pfam PF00005 ABC transporter 48 198 9.1E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_15340 6c7b8cc23014e40969c7729d7f8d6c02 98 SUPERFAMILY SSF89360 1 91 6.08E-10 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 N288_15340 6c7b8cc23014e40969c7729d7f8d6c02 98 Gene3D G3DSA:2.60.300.12 1 94 5.6E-9 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 N288_14435 4f9de78acbd84e29f988f0e3c85d171d 298 Pfam PF00561 alpha/beta hydrolase fold 24 124 1.4E-18 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_14435 4f9de78acbd84e29f988f0e3c85d171d 298 Gene3D G3DSA:3.40.50.1820 11 288 1.1E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_14435 4f9de78acbd84e29f988f0e3c85d171d 298 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 8.4E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_14435 4f9de78acbd84e29f988f0e3c85d171d 298 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 8.4E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_14435 4f9de78acbd84e29f988f0e3c85d171d 298 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 8.4E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_14435 4f9de78acbd84e29f988f0e3c85d171d 298 SUPERFAMILY SSF53474 3 287 1.85E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_20425 7bf5e5216f7375f4e5196d4c58bd61fd 310 PIRSF PIRSF005355 9 309 6.5E-87 T 12-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 N288_20425 7bf5e5216f7375f4e5196d4c58bd61fd 310 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 26 302 1.5E-35 T 12-10-2018 N288_20425 7bf5e5216f7375f4e5196d4c58bd61fd 310 Pfam PF01040 UbiA prenyltransferase family 34 266 5.8E-36 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 N288_20425 7bf5e5216f7375f4e5196d4c58bd61fd 310 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 17 304 19.696 T 12-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 N288_02660 030c657039a8d0dad2b74dc2265e721a 151 Pfam PF05163 DinB family 7 146 2.8E-15 T 12-10-2018 IPR007837 DNA damage-inducible protein DinB N288_02660 030c657039a8d0dad2b74dc2265e721a 151 SUPERFAMILY SSF109854 1 147 1.18E-34 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_02660 030c657039a8d0dad2b74dc2265e721a 151 Gene3D G3DSA:1.20.120.450 2 141 1.3E-32 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_09230 73edb8c57bbf85e0da13a5cca969fc23 119 PIRSF PIRSF018579 1 113 2.2E-49 T 12-10-2018 IPR009709 Protein of unknown function DUF1290 N288_09230 73edb8c57bbf85e0da13a5cca969fc23 119 Pfam PF06947 Protein of unknown function (DUF1290) 22 107 1.3E-37 T 12-10-2018 IPR009709 Protein of unknown function DUF1290 N288_24930 5cc1d3a8c1178c52dd5ec477a1ffd19a 592 Pfam PF10503 Esterase PHB depolymerase 42 245 2.8E-58 T 12-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 N288_24930 5cc1d3a8c1178c52dd5ec477a1ffd19a 592 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 344 408 1.1E-16 T 12-10-2018 N288_24930 5cc1d3a8c1178c52dd5ec477a1ffd19a 592 SUPERFAMILY SSF53474 130 332 2.14E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_24930 5cc1d3a8c1178c52dd5ec477a1ffd19a 592 TIGRFAM TIGR01840 esterase_phb: esterase, PHB depolymerase family 43 245 6.6E-51 T 12-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 N288_24930 5cc1d3a8c1178c52dd5ec477a1ffd19a 592 Gene3D G3DSA:3.40.50.1820 34 326 5.9E-53 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_24930 5cc1d3a8c1178c52dd5ec477a1ffd19a 592 SUPERFAMILY SSF53474 32 129 7.53E-23 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_09500 9eb3861098b703f60daa86547cffdcd0 77 SUPERFAMILY SSF47336 2 76 2.49E-22 T 12-10-2018 IPR036736 ACP-like superfamily N288_09500 9eb3861098b703f60daa86547cffdcd0 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.671 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 N288_09500 9eb3861098b703f60daa86547cffdcd0 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 2.5E-33 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 N288_09500 9eb3861098b703f60daa86547cffdcd0 77 Gene3D G3DSA:1.10.1200.10 1 75 4.4E-28 T 12-10-2018 IPR036736 ACP-like superfamily N288_09500 9eb3861098b703f60daa86547cffdcd0 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 3.1E-15 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain N288_09500 9eb3861098b703f60daa86547cffdcd0 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 55 74 0.003 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 N288_02215 0e827c18bbf62936778714fa2c84fa39 457 Gene3D G3DSA:3.30.70.2740 336 417 3.3E-9 T 12-10-2018 N288_02215 0e827c18bbf62936778714fa2c84fa39 457 Gene3D G3DSA:3.30.465.40 5 236 2.1E-74 T 12-10-2018 N288_02215 0e827c18bbf62936778714fa2c84fa39 457 Pfam PF01565 FAD binding domain 43 180 9.1E-43 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 N288_02215 0e827c18bbf62936778714fa2c84fa39 457 SUPERFAMILY SSF56176 4 217 1.21E-67 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 N288_02215 0e827c18bbf62936778714fa2c84fa39 457 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 456 1.3E-54 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 N288_02215 0e827c18bbf62936778714fa2c84fa39 457 SUPERFAMILY SSF55103 222 457 7.36E-58 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 N288_02215 0e827c18bbf62936778714fa2c84fa39 457 Gene3D G3DSA:1.10.45.10 418 457 5.5E-7 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 N288_23420 80efb795fd4ec096e398bab306347624 1457 SUPERFAMILY SSF49313 1214 1304 5.02E-6 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 N288_23420 80efb795fd4ec096e398bab306347624 1457 Pfam PF00395 S-layer homology domain 98 139 1.2E-16 T 12-10-2018 IPR001119 S-layer homology domain N288_23420 80efb795fd4ec096e398bab306347624 1457 Pfam PF00395 S-layer homology domain 36 79 1.0E-13 T 12-10-2018 IPR001119 S-layer homology domain N288_23420 80efb795fd4ec096e398bab306347624 1457 Pfam PF00395 S-layer homology domain 157 200 7.1E-11 T 12-10-2018 IPR001119 S-layer homology domain N288_23420 80efb795fd4ec096e398bab306347624 1457 SMART SM00736 1122 1215 0.0018 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 N288_23420 80efb795fd4ec096e398bab306347624 1457 SMART SM00736 1216 1309 0.0055 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 N288_23420 80efb795fd4ec096e398bab306347624 1457 SMART SM00736 1028 1121 0.047 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 N288_23420 80efb795fd4ec096e398bab306347624 1457 SMART SM00736 746 839 0.044 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 N288_23420 80efb795fd4ec096e398bab306347624 1457 SMART SM00736 652 745 0.0026 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 N288_23420 80efb795fd4ec096e398bab306347624 1457 SMART SM00736 934 1027 0.024 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 N288_23420 80efb795fd4ec096e398bab306347624 1457 SMART SM00736 558 651 0.0023 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 N288_23420 80efb795fd4ec096e398bab306347624 1457 SMART SM00736 840 933 0.076 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 N288_23420 80efb795fd4ec096e398bab306347624 1457 SMART SM00635 934 1014 0.013 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 N288_23420 80efb795fd4ec096e398bab306347624 1457 SMART SM00635 1122 1202 2.1 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 N288_23420 80efb795fd4ec096e398bab306347624 1457 SMART SM00635 557 638 7.1 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 N288_23420 80efb795fd4ec096e398bab306347624 1457 SMART SM00635 746 826 6.7E-4 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 N288_23420 80efb795fd4ec096e398bab306347624 1457 SMART SM00635 1215 1296 0.011 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 N288_23420 80efb795fd4ec096e398bab306347624 1457 SMART SM00635 651 732 0.19 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 N288_23420 80efb795fd4ec096e398bab306347624 1457 SMART SM00635 1028 1108 0.017 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 N288_23420 80efb795fd4ec096e398bab306347624 1457 Gene3D G3DSA:2.60.40.10 930 1022 1.4E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_23420 80efb795fd4ec096e398bab306347624 1457 Gene3D G3DSA:2.60.40.10 554 646 4.1E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_23420 80efb795fd4ec096e398bab306347624 1457 Gene3D G3DSA:2.60.40.10 742 833 1.6E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_23420 80efb795fd4ec096e398bab306347624 1457 Gene3D G3DSA:2.60.40.10 1024 1116 4.1E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_23420 80efb795fd4ec096e398bab306347624 1457 Gene3D G3DSA:2.60.40.10 1118 1209 1.8E-9 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_23420 80efb795fd4ec096e398bab306347624 1457 Gene3D G3DSA:2.60.40.10 648 740 5.6E-12 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_23420 80efb795fd4ec096e398bab306347624 1457 Gene3D G3DSA:2.60.40.10 1212 1304 2.7E-12 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_23420 80efb795fd4ec096e398bab306347624 1457 Gene3D G3DSA:2.60.40.10 836 928 5.0E-10 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_23420 80efb795fd4ec096e398bab306347624 1457 SUPERFAMILY SSF49313 651 742 6.12E-7 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 N288_02990 8503c6c4e1d5a4be19893b90f113b17c 179 SUPERFAMILY SSF55729 7 174 2.51E-39 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_02990 8503c6c4e1d5a4be19893b90f113b17c 179 Pfam PF13302 Acetyltransferase (GNAT) domain 8 149 2.7E-23 T 12-10-2018 IPR000182 GNAT domain N288_02990 8503c6c4e1d5a4be19893b90f113b17c 179 Gene3D G3DSA:3.40.630.30 1 178 4.9E-43 T 12-10-2018 N288_12955 77db35eb8cf732f58f329692ab90c963 243 Gene3D G3DSA:1.10.10.1320 5 108 1.4E-13 T 12-10-2018 N288_12955 77db35eb8cf732f58f329692ab90c963 243 Pfam PF13490 Putative zinc-finger 10 36 2.9E-8 T 12-10-2018 IPR027383 Putative zinc-finger N288_12955 77db35eb8cf732f58f329692ab90c963 243 Pfam PF10099 Anti-sigma-K factor rskA 58 239 1.8E-25 T 12-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 N288_01705 82bfad39c63f0755c0c371f1401c295a 197 SUPERFAMILY SSF53328 2 191 2.75E-58 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 N288_01705 82bfad39c63f0755c0c371f1401c295a 197 Pfam PF00551 Formyl transferase 2 181 3.5E-56 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 N288_01705 82bfad39c63f0755c0c371f1401c295a 197 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 N288_01705 82bfad39c63f0755c0c371f1401c295a 197 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.335 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 N288_01705 82bfad39c63f0755c0c371f1401c295a 197 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 188 1.6E-68 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 N288_01705 82bfad39c63f0755c0c371f1401c295a 197 Gene3D G3DSA:3.40.50.170 1 196 2.4E-73 T 12-10-2018 N288_01820 fc7ea558b53c70f7330be2179071f575 96 SUPERFAMILY SSF141000 3 94 6.41E-33 T 12-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 N288_01820 fc7ea558b53c70f7330be2179071f575 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 8.0E-23 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 N288_01820 fc7ea558b53c70f7330be2179071f575 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 25.98 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 N288_01820 fc7ea558b53c70f7330be2179071f575 96 Gene3D G3DSA:1.10.20.60 1 94 6.9E-33 T 12-10-2018 N288_01820 fc7ea558b53c70f7330be2179071f575 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 96 1.4E-33 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 N288_15290 e7b4980316e68af87897aa3010d389c9 185 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 185 12.201 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 N288_15290 e7b4980316e68af87897aa3010d389c9 185 SMART SM01207 8 180 6.2E-33 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 N288_15290 e7b4980316e68af87897aa3010d389c9 185 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 177 3.7E-34 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 N288_09060 341124b89d30b9b3c5280cf56a9fa968 162 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 8.2E-64 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 N288_09060 341124b89d30b9b3c5280cf56a9fa968 162 Gene3D G3DSA:3.40.50.620 1 162 1.9E-57 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_09060 341124b89d30b9b3c5280cf56a9fa968 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.2E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 N288_09060 341124b89d30b9b3c5280cf56a9fa968 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.2E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 N288_09060 341124b89d30b9b3c5280cf56a9fa968 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.2E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 N288_09060 341124b89d30b9b3c5280cf56a9fa968 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.2E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 N288_09060 341124b89d30b9b3c5280cf56a9fa968 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.2E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 N288_09060 341124b89d30b9b3c5280cf56a9fa968 162 Pfam PF01467 Cytidylyltransferase-like 7 134 2.7E-17 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 N288_09060 341124b89d30b9b3c5280cf56a9fa968 162 SUPERFAMILY SSF52374 4 157 4.5E-44 T 12-10-2018 N288_09060 341124b89d30b9b3c5280cf56a9fa968 162 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 4 67 1.0E-4 T 12-10-2018 N288_09060 341124b89d30b9b3c5280cf56a9fa968 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 60 5.2E-17 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 N288_09060 341124b89d30b9b3c5280cf56a9fa968 162 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 36.786 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 N288_07980 8dcfbd144a6fa23fd298e2a74e29a77c 369 Pfam PF13378 Enolase C-terminal domain-like 144 355 4.7E-48 T 12-10-2018 IPR029065 Enolase C-terminal domain-like N288_07980 8dcfbd144a6fa23fd298e2a74e29a77c 369 Gene3D G3DSA:3.20.20.120 116 353 1.3E-116 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily N288_07980 8dcfbd144a6fa23fd298e2a74e29a77c 369 SMART SM00922 141 240 1.6E-26 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal N288_07980 8dcfbd144a6fa23fd298e2a74e29a77c 369 SUPERFAMILY SSF51604 113 355 1.22E-63 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily N288_07980 8dcfbd144a6fa23fd298e2a74e29a77c 369 SUPERFAMILY SSF54826 1 125 9.14E-35 T 12-10-2018 N288_07980 8dcfbd144a6fa23fd298e2a74e29a77c 369 Gene3D G3DSA:3.30.390.10 1 355 1.3E-116 T 12-10-2018 IPR029017 Enolase-like, N-terminal N288_07980 8dcfbd144a6fa23fd298e2a74e29a77c 369 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 8 124 2.8E-23 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain N288_19510 06420348a29448b1f6cd798b93140c50 643 SUPERFAMILY SSF55186 67 243 6.8E-67 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 N288_19510 06420348a29448b1f6cd798b93140c50 643 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 69 643 35.243 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 N288_19510 06420348a29448b1f6cd798b93140c50 643 Gene3D G3DSA:3.30.930.10 227 540 1.1E-119 T 12-10-2018 N288_19510 06420348a29448b1f6cd798b93140c50 643 Gene3D G3DSA:3.30.54.20 133 189 1.9E-65 T 12-10-2018 N288_19510 06420348a29448b1f6cd798b93140c50 643 Gene3D G3DSA:3.10.20.30 2 66 2.9E-26 T 12-10-2018 IPR012675 Beta-grasp domain superfamily N288_19510 06420348a29448b1f6cd798b93140c50 643 Pfam PF03129 Anticodon binding domain 549 639 5.5E-26 T 12-10-2018 IPR004154 Anticodon-binding N288_19510 06420348a29448b1f6cd798b93140c50 643 SUPERFAMILY SSF55681 245 534 1.15E-98 T 12-10-2018 N288_19510 06420348a29448b1f6cd798b93140c50 643 SUPERFAMILY SSF81271 5 64 2.62E-16 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 N288_19510 06420348a29448b1f6cd798b93140c50 643 Gene3D G3DSA:3.40.50.800 541 643 5.2E-34 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily N288_19510 06420348a29448b1f6cd798b93140c50 643 Pfam PF02824 TGS domain 6 64 1.3E-12 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 N288_19510 06420348a29448b1f6cd798b93140c50 643 SMART SM00863 172 221 2.6E-26 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 N288_19510 06420348a29448b1f6cd798b93140c50 643 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 75 640 9.9E-241 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 N288_19510 06420348a29448b1f6cd798b93140c50 643 SUPERFAMILY SSF52954 535 639 2.57E-32 T 12-10-2018 N288_19510 06420348a29448b1f6cd798b93140c50 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 472 500 2.1E-47 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 N288_19510 06420348a29448b1f6cd798b93140c50 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 542 554 2.1E-47 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 N288_19510 06420348a29448b1f6cd798b93140c50 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 366 389 2.1E-47 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 N288_19510 06420348a29448b1f6cd798b93140c50 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 333 361 2.1E-47 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 N288_19510 06420348a29448b1f6cd798b93140c50 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 515 528 2.1E-47 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 N288_19510 06420348a29448b1f6cd798b93140c50 643 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 221 3.0E-17 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 N288_19510 06420348a29448b1f6cd798b93140c50 643 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 326 537 8.7E-35 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_19510 06420348a29448b1f6cd798b93140c50 643 Gene3D G3DSA:3.30.980.10 72 224 1.9E-65 T 12-10-2018 N288_20280 9d46602b8d5dd26234636c104aa410d6 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 N288_20280 9d46602b8d5dd26234636c104aa410d6 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 N288_20280 9d46602b8d5dd26234636c104aa410d6 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 N288_20280 9d46602b8d5dd26234636c104aa410d6 292 SUPERFAMILY SSF53850 88 289 3.48E-28 T 12-10-2018 N288_20280 9d46602b8d5dd26234636c104aa410d6 292 Gene3D G3DSA:3.40.190.10 164 268 9.0E-26 T 12-10-2018 N288_20280 9d46602b8d5dd26234636c104aa410d6 292 Gene3D G3DSA:1.10.10.10 1 91 1.2E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_20280 9d46602b8d5dd26234636c104aa410d6 292 SUPERFAMILY SSF46785 1 111 1.84E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_20280 9d46602b8d5dd26234636c104aa410d6 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.5E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 N288_20280 9d46602b8d5dd26234636c104aa410d6 292 Pfam PF03466 LysR substrate binding domain 87 287 2.5E-33 T 12-10-2018 IPR005119 LysR, substrate-binding N288_20280 9d46602b8d5dd26234636c104aa410d6 292 Gene3D G3DSA:3.40.190.10 92 276 9.0E-26 T 12-10-2018 N288_04455 628fd91021473c2718f37c5ed4d0b8b7 394 Pfam PF01979 Amidohydrolase family 58 390 3.5E-47 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 N288_04455 628fd91021473c2718f37c5ed4d0b8b7 394 SUPERFAMILY SSF51338 7 381 5.26E-17 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_04455 628fd91021473c2718f37c5ed4d0b8b7 394 Gene3D G3DSA:3.20.20.140 64 355 1.6E-120 T 12-10-2018 N288_04455 628fd91021473c2718f37c5ed4d0b8b7 394 SUPERFAMILY SSF51556 62 356 1.7E-83 T 12-10-2018 IPR032466 Metal-dependent hydrolase N288_04455 628fd91021473c2718f37c5ed4d0b8b7 394 Gene3D G3DSA:2.30.40.10 14 391 1.6E-120 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_15360 bbbefbb41babef93724338ccc94d7a7b 453 SUPERFAMILY SSF55604 9 82 2.22E-16 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 N288_15360 bbbefbb41babef93724338ccc94d7a7b 453 Gene3D G3DSA:3.30.1360.60 3 78 5.1E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 N288_15360 bbbefbb41babef93724338ccc94d7a7b 453 Pfam PF00367 phosphotransferase system, EIIB 11 43 3.3E-13 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 N288_15360 bbbefbb41babef93724338ccc94d7a7b 453 Pfam PF02378 Phosphotransferase system, EIIC 118 387 1.8E-39 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 N288_02200 bb5fd2336906692bcc34da2de232c1bd 738 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 645 734 8.6E-24 T 12-10-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 N288_02200 bb5fd2336906692bcc34da2de232c1bd 738 Gene3D G3DSA:3.20.20.70 312 629 5.6E-131 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_02200 bb5fd2336906692bcc34da2de232c1bd 738 SUPERFAMILY SSF51445 326 663 2.59E-109 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_02200 bb5fd2336906692bcc34da2de232c1bd 738 ProSitePatterns PS00512 Alpha-galactosidase signature. 361 376 - T 12-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 N288_02200 bb5fd2336906692bcc34da2de232c1bd 738 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 29 286 4.3E-89 T 12-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 N288_02200 bb5fd2336906692bcc34da2de232c1bd 738 Gene3D G3DSA:2.60.40.1180 630 738 1.2E-27 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_02200 bb5fd2336906692bcc34da2de232c1bd 738 PRINTS PR00743 Glycosyl hydrolase family 36 signature 410 432 9.4E-57 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 N288_02200 bb5fd2336906692bcc34da2de232c1bd 738 PRINTS PR00743 Glycosyl hydrolase family 36 signature 542 558 9.4E-57 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 N288_02200 bb5fd2336906692bcc34da2de232c1bd 738 PRINTS PR00743 Glycosyl hydrolase family 36 signature 360 375 9.4E-57 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 N288_02200 bb5fd2336906692bcc34da2de232c1bd 738 PRINTS PR00743 Glycosyl hydrolase family 36 signature 243 258 9.4E-57 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 N288_02200 bb5fd2336906692bcc34da2de232c1bd 738 PRINTS PR00743 Glycosyl hydrolase family 36 signature 517 533 9.4E-57 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 N288_02200 bb5fd2336906692bcc34da2de232c1bd 738 PRINTS PR00743 Glycosyl hydrolase family 36 signature 332 346 9.4E-57 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 N288_02200 bb5fd2336906692bcc34da2de232c1bd 738 PRINTS PR00743 Glycosyl hydrolase family 36 signature 294 314 9.4E-57 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 N288_02200 bb5fd2336906692bcc34da2de232c1bd 738 Pfam PF02065 Melibiase 291 631 2.7E-157 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 N288_02200 bb5fd2336906692bcc34da2de232c1bd 738 PIRSF PIRSF005536 1 737 3.9E-289 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 N288_02200 bb5fd2336906692bcc34da2de232c1bd 738 Gene3D G3DSA:2.70.98.60 1 311 6.7E-114 T 12-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 N288_00855 30144f76ee846c7e5dac5b176b5abfc6 88 SUPERFAMILY SSF50104 12 68 3.61E-8 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily N288_21730 b2b29189bfd5d6b8008054f0b8fa276f 315 Pfam PF07670 Nucleoside recognition 18 98 6.7E-8 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 N288_21730 b2b29189bfd5d6b8008054f0b8fa276f 315 Pfam PF07670 Nucleoside recognition 176 263 3.9E-7 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 N288_11595 cf5bdf7889fd05d496f28dd382024779 296 SUPERFAMILY SSF47240 1 293 7.91E-96 T 12-10-2018 IPR009078 Ferritin-like superfamily N288_11595 cf5bdf7889fd05d496f28dd382024779 296 Pfam PF05067 Manganese containing catalase 1 292 2.4E-90 T 12-10-2018 IPR007760 Manganese catalase N288_11595 cf5bdf7889fd05d496f28dd382024779 296 Gene3D G3DSA:1.20.1260.130 2 295 3.3E-105 T 12-10-2018 N288_14385 c28972c8612e0f54605fb513d5fb540a 173 SUPERFAMILY SSF109854 3 170 1.53E-34 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_14385 c28972c8612e0f54605fb513d5fb540a 173 Pfam PF04978 Protein of unknown function (DUF664) 19 171 5.9E-14 T 12-10-2018 IPR007061 Protein of unknown function DUF664 N288_14385 c28972c8612e0f54605fb513d5fb540a 173 Gene3D G3DSA:1.20.120.450 3 171 2.6E-40 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_20765 ec40b2b479f9d95d4992e12a6bc46dc1 796 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 153 174 1.3E-46 T 12-10-2018 N288_20765 ec40b2b479f9d95d4992e12a6bc46dc1 796 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 241 267 1.3E-46 T 12-10-2018 N288_20765 ec40b2b479f9d95d4992e12a6bc46dc1 796 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 106 126 1.3E-46 T 12-10-2018 N288_20765 ec40b2b479f9d95d4992e12a6bc46dc1 796 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 309 321 1.3E-46 T 12-10-2018 N288_20765 ec40b2b479f9d95d4992e12a6bc46dc1 796 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 1.3E-46 T 12-10-2018 N288_20765 ec40b2b479f9d95d4992e12a6bc46dc1 796 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 1.3E-46 T 12-10-2018 N288_20765 ec40b2b479f9d95d4992e12a6bc46dc1 796 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 436 455 1.3E-46 T 12-10-2018 N288_20765 ec40b2b479f9d95d4992e12a6bc46dc1 796 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 79 99 5.8E-5 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 N288_20765 ec40b2b479f9d95d4992e12a6bc46dc1 796 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 259 281 5.8E-5 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 N288_20765 ec40b2b479f9d95d4992e12a6bc46dc1 796 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 367 389 5.8E-5 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 N288_20765 ec40b2b479f9d95d4992e12a6bc46dc1 796 Pfam PF00361 Proton-conducting membrane transporter 129 417 2.9E-69 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_20765 ec40b2b479f9d95d4992e12a6bc46dc1 796 TIGRFAM TIGR00940 2a6301s01: monovalent cation:proton antiporter 4 795 0.0 T 12-10-2018 IPR005663 Monovalent cation proton antiporter subunit A GO:0015077|GO:0030004 N288_20765 ec40b2b479f9d95d4992e12a6bc46dc1 796 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 63 116 8.2E-12 T 12-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_20765 ec40b2b479f9d95d4992e12a6bc46dc1 796 Pfam PF13244 Domain of unknown function (DUF4040) 632 697 3.5E-21 T 12-10-2018 IPR025383 Domain of unknown function DUF4040 N288_08705 2137ee91724edb100a84f8a8fee0cd4a 294 SUPERFAMILY SSF82689 189 289 5.1E-24 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 N288_08705 2137ee91724edb100a84f8a8fee0cd4a 294 Gene3D G3DSA:2.30.30.60 141 190 2.5E-21 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily N288_08705 2137ee91724edb100a84f8a8fee0cd4a 294 SUPERFAMILY SSF50182 126 184 8.5E-14 T 12-10-2018 IPR010920 LSM domain superfamily N288_08705 2137ee91724edb100a84f8a8fee0cd4a 294 Gene3D G3DSA:3.30.70.100 191 278 7.5E-30 T 12-10-2018 N288_08705 2137ee91724edb100a84f8a8fee0cd4a 294 Pfam PF00924 Mechanosensitive ion channel 83 280 2.6E-50 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 N288_08705 2137ee91724edb100a84f8a8fee0cd4a 294 SUPERFAMILY SSF82861 43 124 4.45E-15 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 N288_05535 3368f90ba0e4144203edf14b989171db 274 SUPERFAMILY SSF161098 6 274 2.34E-70 T 12-10-2018 IPR035906 MetI-like superfamily N288_05535 3368f90ba0e4144203edf14b989171db 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 265 9.8E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_05535 3368f90ba0e4144203edf14b989171db 274 Gene3D G3DSA:1.10.3720.10 2 266 2.0E-70 T 12-10-2018 IPR035906 MetI-like superfamily N288_19735 c6356507559e2932f3b0b4537b9a2264 401 Hamap MF_00005 Argininosuccinate synthase [argG]. 3 396 55.236 T 12-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 N288_19735 c6356507559e2932f3b0b4537b9a2264 401 Pfam PF00764 Arginosuccinate synthase 7 390 1.6E-181 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 N288_19735 c6356507559e2932f3b0b4537b9a2264 401 Gene3D G3DSA:3.40.50.620 1 173 2.6E-67 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_19735 c6356507559e2932f3b0b4537b9a2264 401 TIGRFAM TIGR00032 argG: argininosuccinate synthase 5 392 1.7E-175 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 N288_19735 c6356507559e2932f3b0b4537b9a2264 401 SUPERFAMILY SSF69864 170 397 1.83E-92 T 12-10-2018 N288_19735 c6356507559e2932f3b0b4537b9a2264 401 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 9 17 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 N288_19735 c6356507559e2932f3b0b4537b9a2264 401 Gene3D G3DSA:3.90.1260.10 174 401 1.1E-92 T 12-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 N288_19735 c6356507559e2932f3b0b4537b9a2264 401 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 116 127 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 N288_19735 c6356507559e2932f3b0b4537b9a2264 401 SUPERFAMILY SSF52402 1 170 3.53E-47 T 12-10-2018 N288_21550 0cf2afb88c6b80b3482bba931a3be90b 299 SMART SM00028 243 276 2.3 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_21550 0cf2afb88c6b80b3482bba931a3be90b 299 SMART SM00028 160 193 37.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_21550 0cf2afb88c6b80b3482bba931a3be90b 299 SMART SM00028 118 151 240.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_21550 0cf2afb88c6b80b3482bba931a3be90b 299 SMART SM00028 203 236 7.5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_21550 0cf2afb88c6b80b3482bba931a3be90b 299 SUPERFAMILY SSF48452 134 280 1.64E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_21550 0cf2afb88c6b80b3482bba931a3be90b 299 Pfam PF01381 Helix-turn-helix 12 65 8.2E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_21550 0cf2afb88c6b80b3482bba931a3be90b 299 SMART SM00530 11 65 5.0E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_21550 0cf2afb88c6b80b3482bba931a3be90b 299 SUPERFAMILY SSF47413 7 66 2.11E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_21550 0cf2afb88c6b80b3482bba931a3be90b 299 Gene3D G3DSA:1.25.40.10 5 299 1.7E-77 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_13925 da96c0b1b1cae207d56b4146c6c9f235 263 Gene3D G3DSA:3.30.750.24 137 252 2.3E-24 T 12-10-2018 IPR036513 STAS domain superfamily N288_13925 da96c0b1b1cae207d56b4146c6c9f235 263 Gene3D G3DSA:3.30.450.20 10 123 9.1E-26 T 12-10-2018 N288_13925 da96c0b1b1cae207d56b4146c6c9f235 263 SUPERFAMILY SSF52091 141 226 2.88E-5 T 12-10-2018 IPR036513 STAS domain superfamily N288_13925 da96c0b1b1cae207d56b4146c6c9f235 263 SUPERFAMILY SSF55785 16 122 3.81E-5 T 12-10-2018 IPR035965 PAS domain superfamily N288_12130 fc28367ba9bf7aaf850aa878b565c729 406 SUPERFAMILY SSF103473 11 393 9.29E-36 T 12-10-2018 IPR036259 MFS transporter superfamily N288_12130 fc28367ba9bf7aaf850aa878b565c729 406 Gene3D G3DSA:1.20.1250.20 5 392 6.4E-31 T 12-10-2018 N288_12130 fc28367ba9bf7aaf850aa878b565c729 406 PRINTS PR01988 Putative bacilysin exporter bacE signature 279 302 7.1E-7 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 N288_12130 fc28367ba9bf7aaf850aa878b565c729 406 PRINTS PR01988 Putative bacilysin exporter bacE signature 156 173 7.1E-7 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 N288_12130 fc28367ba9bf7aaf850aa878b565c729 406 PRINTS PR01988 Putative bacilysin exporter bacE signature 68 86 7.1E-7 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 N288_12130 fc28367ba9bf7aaf850aa878b565c729 406 PRINTS PR01988 Putative bacilysin exporter bacE signature 5 27 7.1E-7 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 N288_12130 fc28367ba9bf7aaf850aa878b565c729 406 PRINTS PR01988 Putative bacilysin exporter bacE signature 129 150 7.1E-7 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 N288_12130 fc28367ba9bf7aaf850aa878b565c729 406 Pfam PF05977 Transmembrane secretion effector 6 393 5.7E-21 T 12-10-2018 IPR010290 Transmembrane secretion effector N288_18935 85f00e8d8327b1693fd66eb763d5b045 290 SUPERFAMILY SSF56112 2 247 2.49E-16 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_18935 85f00e8d8327b1693fd66eb763d5b045 290 Pfam PF01636 Phosphotransferase enzyme family 83 198 2.0E-9 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase N288_18935 85f00e8d8327b1693fd66eb763d5b045 290 Gene3D G3DSA:3.90.1200.10 67 288 2.5E-16 T 12-10-2018 N288_25890 c2241580b98694a376735dc7cd901f48 225 SMART SM00862 146 223 1.5E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_25890 c2241580b98694a376735dc7cd901f48 225 SUPERFAMILY SSF52172 1 178 1.18E-35 T 12-10-2018 IPR011006 CheY-like superfamily N288_25890 c2241580b98694a376735dc7cd901f48 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 222 2.0E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_25890 c2241580b98694a376735dc7cd901f48 225 SMART SM00448 1 113 1.3E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_25890 c2241580b98694a376735dc7cd901f48 225 Gene3D G3DSA:1.10.10.10 122 225 5.6E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_25890 c2241580b98694a376735dc7cd901f48 225 Gene3D G3DSA:3.40.50.2300 1 121 1.2E-31 T 12-10-2018 N288_25890 c2241580b98694a376735dc7cd901f48 225 Pfam PF00072 Response regulator receiver domain 3 114 6.9E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_06215 2da909bb313d93c29032d62f9850d371 182 SUPERFAMILY SSF51735 1 66 1.32E-5 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_08995 2dd190120bf2f7d1d059956314b536d2 119 Pfam PF08868 YugN-like family 6 104 1.9E-14 T 12-10-2018 IPR014967 Uncharacterised protein family, YugN-like N288_08995 2dd190120bf2f7d1d059956314b536d2 119 Gene3D G3DSA:3.30.310.100 1 118 3.4E-47 T 12-10-2018 IPR036491 YugN-like superfamily N288_08995 2dd190120bf2f7d1d059956314b536d2 119 SUPERFAMILY SSF160755 1 113 1.96E-41 T 12-10-2018 IPR036491 YugN-like superfamily N288_15600 d920c1b2aefcf140608de397e138fb83 262 Pfam PF00290 Tryptophan synthase alpha chain 8 255 1.9E-87 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 N288_15600 d920c1b2aefcf140608de397e138fb83 262 SUPERFAMILY SSF51366 1 253 4.95E-85 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 N288_15600 d920c1b2aefcf140608de397e138fb83 262 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 12-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 N288_15600 d920c1b2aefcf140608de397e138fb83 262 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 257 33.655 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 N288_15600 d920c1b2aefcf140608de397e138fb83 262 Gene3D G3DSA:3.20.20.70 1 260 1.1E-95 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_15600 d920c1b2aefcf140608de397e138fb83 262 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 250 5.1E-74 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 N288_05590 f704b363d5773a03d9bc71f982d79138 109 Gene3D G3DSA:1.10.10.10 1 107 2.1E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_05590 f704b363d5773a03d9bc71f982d79138 109 Pfam PF03551 Transcriptional regulator PadR-like family 16 88 1.9E-23 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal N288_05590 f704b363d5773a03d9bc71f982d79138 109 SUPERFAMILY SSF46785 11 102 4.15E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_02745 6bb07c48bf0a4a39806dee1faf5b2cc4 235 SUPERFAMILY SSF55469 32 232 1.44E-56 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 N288_02745 6bb07c48bf0a4a39806dee1faf5b2cc4 235 Pfam PF00881 Nitroreductase family 38 213 2.0E-33 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 N288_02745 6bb07c48bf0a4a39806dee1faf5b2cc4 235 Gene3D G3DSA:3.40.109.10 21 233 3.1E-59 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 N288_08630 b27b285e91f6663413c28ed243ee2bba 253 Gene3D G3DSA:3.40.50.720 1 251 4.3E-80 T 12-10-2018 N288_08630 b27b285e91f6663413c28ed243ee2bba 253 SUPERFAMILY SSF51735 2 248 1.57E-81 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_08630 b27b285e91f6663413c28ed243ee2bba 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.9E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08630 b27b285e91f6663413c28ed243ee2bba 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 5.9E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08630 b27b285e91f6663413c28ed243ee2bba 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.9E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08630 b27b285e91f6663413c28ed243ee2bba 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 1.2E-58 T 12-10-2018 N288_08630 b27b285e91f6663413c28ed243ee2bba 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.7E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08630 b27b285e91f6663413c28ed243ee2bba 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.7E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08630 b27b285e91f6663413c28ed243ee2bba 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.7E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08630 b27b285e91f6663413c28ed243ee2bba 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.7E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08630 b27b285e91f6663413c28ed243ee2bba 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.7E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_08630 b27b285e91f6663413c28ed243ee2bba 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.7E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_00900 b3d7f56d18e6d0cbd54cee6d3ac7381d 289 SUPERFAMILY SSF52540 5 239 9.85E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00900 b3d7f56d18e6d0cbd54cee6d3ac7381d 289 Gene3D G3DSA:3.40.50.300 2 285 3.8E-75 T 12-10-2018 N288_00900 b3d7f56d18e6d0cbd54cee6d3ac7381d 289 Pfam PF00005 ABC transporter 24 174 1.2E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_00900 b3d7f56d18e6d0cbd54cee6d3ac7381d 289 SMART SM00382 32 223 6.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_00900 b3d7f56d18e6d0cbd54cee6d3ac7381d 289 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 279 1.9E-119 T 12-10-2018 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 N288_00900 b3d7f56d18e6d0cbd54cee6d3ac7381d 289 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_12120 02b5fa12038c2dffe227e80291d4c893 745 Gene3D G3DSA:3.40.50.300 146 389 9.4E-42 T 12-10-2018 N288_12120 02b5fa12038c2dffe227e80291d4c893 745 SMART SM00382 158 381 0.0021 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_12120 02b5fa12038c2dffe227e80291d4c893 745 SUPERFAMILY SSF52540 155 592 4.09E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_12120 02b5fa12038c2dffe227e80291d4c893 745 Pfam PF13086 AAA domain 160 369 3.5E-27 T 12-10-2018 N288_12120 02b5fa12038c2dffe227e80291d4c893 745 Gene3D G3DSA:3.40.50.300 409 616 1.1E-30 T 12-10-2018 N288_12120 02b5fa12038c2dffe227e80291d4c893 745 Pfam PF13087 AAA domain 400 584 6.7E-23 T 12-10-2018 N288_14515 ed6432765865c4690555d958e23f97fd 350 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 216 301 1.0E-12 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_14515 ed6432765865c4690555d958e23f97fd 350 Gene3D G3DSA:1.10.287.130 120 167 7.1E-24 T 12-10-2018 N288_14515 ed6432765865c4690555d958e23f97fd 350 SMART SM00387 215 313 2.4E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_14515 ed6432765865c4690555d958e23f97fd 350 SUPERFAMILY SSF55874 161 319 3.01E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_14515 ed6432765865c4690555d958e23f97fd 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 305 4.1E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_14515 ed6432765865c4690555d958e23f97fd 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 271 281 4.1E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_14515 ed6432765865c4690555d958e23f97fd 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 253 267 4.1E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_14515 ed6432765865c4690555d958e23f97fd 350 Gene3D G3DSA:3.30.565.10 168 307 7.1E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_22050 34681917ccd6211bf5d6d429d9611be6 532 Pfam PF00460 Flagella basal body rod protein 8 37 3.3E-7 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 N288_22050 34681917ccd6211bf5d6d429d9611be6 532 SUPERFAMILY SSF64518 119 525 8.76E-19 T 12-10-2018 N288_22050 34681917ccd6211bf5d6d429d9611be6 532 PRINTS PR01005 Flagellar hook-associated protein signature 493 517 3.2E-7 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 N288_22050 34681917ccd6211bf5d6d429d9611be6 532 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 3.2E-7 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 N288_22050 34681917ccd6211bf5d6d429d9611be6 532 PRINTS PR01005 Flagellar hook-associated protein signature 167 191 3.2E-7 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 N288_22050 34681917ccd6211bf5d6d429d9611be6 532 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 472 525 7.2E-14 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain N288_22050 34681917ccd6211bf5d6d429d9611be6 532 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 7 525 2.7E-100 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 N288_08285 729a20f83d2912dd80eec5aa65c68ac0 368 Pfam PF07993 Male sterility protein 9 243 3.4E-45 T 12-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 N288_08285 729a20f83d2912dd80eec5aa65c68ac0 368 SUPERFAMILY SSF51735 3 353 3.62E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_08285 729a20f83d2912dd80eec5aa65c68ac0 368 Gene3D G3DSA:3.40.50.720 1 352 1.4E-56 T 12-10-2018 N288_02845 a4714fdb44bc4e721bbf786e4d2867e3 460 Gene3D G3DSA:3.30.2130.10 294 458 7.5E-58 T 12-10-2018 N288_02845 a4714fdb44bc4e721bbf786e4d2867e3 460 Pfam PF00696 Amino acid kinase family 5 280 7.3E-37 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 N288_02845 a4714fdb44bc4e721bbf786e4d2867e3 460 SUPERFAMILY SSF55021 300 369 3.7E-9 T 12-10-2018 N288_02845 a4714fdb44bc4e721bbf786e4d2867e3 460 ProSitePatterns PS00324 Aspartokinase signature. 8 16 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 N288_02845 a4714fdb44bc4e721bbf786e4d2867e3 460 SUPERFAMILY SSF55021 376 454 1.15E-22 T 12-10-2018 N288_02845 a4714fdb44bc4e721bbf786e4d2867e3 460 SUPERFAMILY SSF53633 5 294 1.85E-61 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily N288_02845 a4714fdb44bc4e721bbf786e4d2867e3 460 Pfam PF13840 ACT domain 384 448 6.1E-9 T 12-10-2018 IPR027795 CASTOR, ACT domain N288_02845 a4714fdb44bc4e721bbf786e4d2867e3 460 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 453 8.8E-74 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 N288_02845 a4714fdb44bc4e721bbf786e4d2867e3 460 Gene3D G3DSA:1.20.120.1320 44 139 1.4E-68 T 12-10-2018 N288_02845 a4714fdb44bc4e721bbf786e4d2867e3 460 Gene3D G3DSA:3.40.1160.10 8 291 1.4E-68 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily N288_02845 a4714fdb44bc4e721bbf786e4d2867e3 460 PIRSF PIRSF000726 4 459 4.0E-72 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 N288_13145 a981234bb25c27ec179724fe563bda2f 174 Gene3D G3DSA:1.10.1740.10 3 111 2.1E-21 T 12-10-2018 N288_13145 a981234bb25c27ec179724fe563bda2f 174 Pfam PF08281 Sigma-70, region 4 109 161 9.6E-18 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_13145 a981234bb25c27ec179724fe563bda2f 174 Pfam PF04542 Sigma-70 region 2 22 87 2.9E-11 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_13145 a981234bb25c27ec179724fe563bda2f 174 SUPERFAMILY SSF88946 7 100 2.28E-20 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_13145 a981234bb25c27ec179724fe563bda2f 174 SUPERFAMILY SSF88659 113 167 8.04E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_13145 a981234bb25c27ec179724fe563bda2f 174 ProSitePatterns PS00622 LuxR-type HTH domain signature. 133 160 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_13145 a981234bb25c27ec179724fe563bda2f 174 Gene3D G3DSA:1.10.10.10 112 169 4.0E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_13145 a981234bb25c27ec179724fe563bda2f 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 165 1.1E-27 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_20065 0acc538c488c2b519835620541b9a33a 310 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 307 1.5E-125 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 N288_20065 0acc538c488c2b519835620541b9a33a 310 Gene3D G3DSA:3.40.50.1100 45 144 2.3E-118 T 12-10-2018 N288_20065 0acc538c488c2b519835620541b9a33a 310 SUPERFAMILY SSF53686 1 307 3.14E-100 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme N288_20065 0acc538c488c2b519835620541b9a33a 310 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 N288_20065 0acc538c488c2b519835620541b9a33a 310 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 307 6.3E-133 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 N288_20065 0acc538c488c2b519835620541b9a33a 310 Gene3D G3DSA:3.40.50.1100 6 303 2.3E-118 T 12-10-2018 N288_20065 0acc538c488c2b519835620541b9a33a 310 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 296 5.6E-71 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme N288_23270 9d8543e478b41aa3d8cdb9e850a73950 337 SUPERFAMILY SSF51735 2 153 9.11E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_23270 9d8543e478b41aa3d8cdb9e850a73950 337 SUPERFAMILY SSF55347 125 304 3.76E-38 T 12-10-2018 N288_23270 9d8543e478b41aa3d8cdb9e850a73950 337 Gene3D G3DSA:3.30.360.10 127 329 2.7E-105 T 12-10-2018 N288_23270 9d8543e478b41aa3d8cdb9e850a73950 337 Gene3D G3DSA:3.40.50.720 2 310 2.7E-105 T 12-10-2018 N288_23270 9d8543e478b41aa3d8cdb9e850a73950 337 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 117 6.8E-28 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 N288_23270 9d8543e478b41aa3d8cdb9e850a73950 337 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 243 1.4E-10 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 N288_22750 5234b7d384def9785283fc6812b3dc87 643 Gene3D G3DSA:3.40.930.10 491 637 1.5E-13 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 N288_22750 5234b7d384def9785283fc6812b3dc87 643 SUPERFAMILY SSF52794 393 475 7.32E-8 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 N288_22750 5234b7d384def9785283fc6812b3dc87 643 Gene3D G3DSA:1.10.10.10 7 67 6.4E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_22750 5234b7d384def9785283fc6812b3dc87 643 SUPERFAMILY SSF55804 493 636 6.28E-21 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 N288_22750 5234b7d384def9785283fc6812b3dc87 643 Gene3D G3DSA:3.40.50.2300 393 476 3.4E-8 T 12-10-2018 N288_22750 5234b7d384def9785283fc6812b3dc87 643 Gene3D G3DSA:1.10.1790.10 282 380 8.0E-18 T 12-10-2018 N288_22750 5234b7d384def9785283fc6812b3dc87 643 SUPERFAMILY SSF63520 163 268 4.58E-9 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 N288_22750 5234b7d384def9785283fc6812b3dc87 643 SUPERFAMILY SSF63520 282 383 4.58E-22 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 N288_22750 5234b7d384def9785283fc6812b3dc87 643 Pfam PF05043 Mga helix-turn-helix domain 94 167 9.7E-7 T 12-10-2018 IPR007737 Mga helix-turn-helix domain N288_22750 5234b7d384def9785283fc6812b3dc87 643 Gene3D G3DSA:1.10.1790.10 177 269 2.5E-5 T 12-10-2018 N288_22750 5234b7d384def9785283fc6812b3dc87 643 Pfam PF00874 PRD domain 292 379 3.9E-19 T 12-10-2018 IPR011608 PRD domain GO:0006355 N288_22750 5234b7d384def9785283fc6812b3dc87 643 Pfam PF00874 PRD domain 186 266 1.2E-6 T 12-10-2018 IPR011608 PRD domain GO:0006355 N288_22750 5234b7d384def9785283fc6812b3dc87 643 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 499 636 4.1E-15 T 12-10-2018 IPR002178 PTS EIIA type-2 domain N288_22750 5234b7d384def9785283fc6812b3dc87 643 Pfam PF08279 HTH domain 9 64 4.8E-7 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 Gene3D G3DSA:3.30.499.10 375 599 3.9E-103 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 Gene3D G3DSA:3.20.19.10 663 901 8.2E-102 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 ProSitePatterns PS01244 Aconitase family signature 2. 502 515 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 Pfam PF00694 Aconitase C-terminal domain 701 828 7.2E-45 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 SUPERFAMILY SSF53732 5 636 2.49E-224 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 Gene3D G3DSA:3.30.499.20 6 374 1.1E-156 T 12-10-2018 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 Pfam PF00330 Aconitase family (aconitate hydratase) 72 571 2.8E-173 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 SUPERFAMILY SSF52016 640 899 9.61E-86 T 12-10-2018 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 PRINTS PR00415 Aconitase family signature 440 451 1.1E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 PRINTS PR00415 Aconitase family signature 147 160 1.1E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 PRINTS PR00415 Aconitase family signature 295 308 1.1E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 PRINTS PR00415 Aconitase family signature 171 179 1.1E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 PRINTS PR00415 Aconitase family signature 374 388 1.1E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 PRINTS PR00415 Aconitase family signature 502 515 1.1E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 PRINTS PR00415 Aconitase family signature 281 294 1.1E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 PRINTS PR00415 Aconitase family signature 205 218 1.1E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 PRINTS PR00415 Aconitase family signature 219 234 1.1E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 ProSitePatterns PS00450 Aconitase family signature 1. 436 452 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 899 0.0 T 12-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 N288_11685 6fb6ec27fe6104621fa8fad6be6393b4 902 Gene3D G3DSA:1.10.1440.20 600 660 1.0E-21 T 12-10-2018 N288_06075 854746eb311de6a10c48ed9f849386c9 956 SUPERFAMILY SSF47384 571 652 1.49E-22 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_06075 854746eb311de6a10c48ed9f849386c9 956 Gene3D G3DSA:3.40.50.12740 825 951 2.3E-29 T 12-10-2018 N288_06075 854746eb311de6a10c48ed9f849386c9 956 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 696 806 2.9E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_06075 854746eb311de6a10c48ed9f849386c9 956 Pfam PF00512 His Kinase A (phospho-acceptor) domain 585 651 2.6E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_06075 854746eb311de6a10c48ed9f849386c9 956 SUPERFAMILY SSF55781 302 467 3.93E-14 T 12-10-2018 N288_06075 854746eb311de6a10c48ed9f849386c9 956 Gene3D G3DSA:1.20.1480.50 170 271 1.0E-8 T 12-10-2018 N288_06075 854746eb311de6a10c48ed9f849386c9 956 Gene3D G3DSA:3.30.565.10 655 813 4.0E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_06075 854746eb311de6a10c48ed9f849386c9 956 SMART SM00065 317 456 0.0044 T 12-10-2018 IPR003018 GAF domain GO:0005515 N288_06075 854746eb311de6a10c48ed9f849386c9 956 SMART SM00448 826 938 8.0E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_06075 854746eb311de6a10c48ed9f849386c9 956 Gene3D G3DSA:3.30.450.20 457 573 1.4E-7 T 12-10-2018 N288_06075 854746eb311de6a10c48ed9f849386c9 956 PRINTS PR00344 Bacterial sensor protein C-terminal signature 792 805 1.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06075 854746eb311de6a10c48ed9f849386c9 956 PRINTS PR00344 Bacterial sensor protein C-terminal signature 733 747 1.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06075 854746eb311de6a10c48ed9f849386c9 956 PRINTS PR00344 Bacterial sensor protein C-terminal signature 751 761 1.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06075 854746eb311de6a10c48ed9f849386c9 956 PRINTS PR00344 Bacterial sensor protein C-terminal signature 768 786 1.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_06075 854746eb311de6a10c48ed9f849386c9 956 Pfam PF00072 Response regulator receiver domain 828 938 7.9E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_06075 854746eb311de6a10c48ed9f849386c9 956 SMART SM00304 212 265 7.2E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_06075 854746eb311de6a10c48ed9f849386c9 956 SMART SM00388 585 651 4.7E-25 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_06075 854746eb311de6a10c48ed9f849386c9 956 SUPERFAMILY SSF52172 824 942 1.71E-28 T 12-10-2018 IPR011006 CheY-like superfamily N288_06075 854746eb311de6a10c48ed9f849386c9 956 Pfam PF13492 GAF domain 317 448 5.6E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 N288_06075 854746eb311de6a10c48ed9f849386c9 956 SUPERFAMILY SSF158472 212 262 1.83E-5 T 12-10-2018 N288_06075 854746eb311de6a10c48ed9f849386c9 956 SUPERFAMILY SSF55874 640 807 4.58E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_06075 854746eb311de6a10c48ed9f849386c9 956 SMART SM00387 696 808 3.9E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_06075 854746eb311de6a10c48ed9f849386c9 956 Gene3D G3DSA:1.10.287.130 574 653 3.0E-27 T 12-10-2018 N288_06075 854746eb311de6a10c48ed9f849386c9 956 Gene3D G3DSA:3.30.450.40 276 456 6.9E-16 T 12-10-2018 IPR029016 GAF-like domain superfamily N288_12055 d0eae775e2214e86ce4a0ffdb259d32e 357 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 143 2.1E-38 T 12-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_12055 d0eae775e2214e86ce4a0ffdb259d32e 357 Gene3D G3DSA:3.40.50.2000 164 320 4.8E-91 T 12-10-2018 N288_12055 d0eae775e2214e86ce4a0ffdb259d32e 357 SUPERFAMILY SSF53756 3 347 3.93E-88 T 12-10-2018 N288_12055 d0eae775e2214e86ce4a0ffdb259d32e 357 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 189 342 1.7E-26 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 N288_12055 d0eae775e2214e86ce4a0ffdb259d32e 357 Gene3D G3DSA:3.40.50.2000 6 163 4.8E-91 T 12-10-2018 N288_12055 d0eae775e2214e86ce4a0ffdb259d32e 357 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 354 27.894 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_18905 98cc47cb3504612d6b71212573ee6a9a 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 202 29.319 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 N288_18905 98cc47cb3504612d6b71212573ee6a9a 203 Gene3D G3DSA:1.10.150.20 66 140 9.6E-25 T 12-10-2018 N288_18905 98cc47cb3504612d6b71212573ee6a9a 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 3 202 2.5E-57 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 N288_18905 98cc47cb3504612d6b71212573ee6a9a 203 SUPERFAMILY SSF50249 2 62 8.0E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_18905 98cc47cb3504612d6b71212573ee6a9a 203 Pfam PF01330 RuvA N terminal domain 2 61 3.2E-19 T 12-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 N288_18905 98cc47cb3504612d6b71212573ee6a9a 203 Gene3D G3DSA:2.40.50.140 1 64 2.3E-17 T 12-10-2018 N288_18905 98cc47cb3504612d6b71212573ee6a9a 203 Pfam PF14520 Helix-hairpin-helix domain 71 128 1.3E-14 T 12-10-2018 N288_18905 98cc47cb3504612d6b71212573ee6a9a 203 SUPERFAMILY SSF47781 65 135 1.59E-20 T 12-10-2018 IPR010994 RuvA domain 2-like N288_18905 98cc47cb3504612d6b71212573ee6a9a 203 SUPERFAMILY SSF46929 158 201 2.62E-9 T 12-10-2018 IPR036267 RuvA, C-terminal domain superfamily N288_18905 98cc47cb3504612d6b71212573ee6a9a 203 Pfam PF07499 RuvA, C-terminal domain 158 201 1.5E-10 T 12-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 N288_18905 98cc47cb3504612d6b71212573ee6a9a 203 SMART SM00278 72 91 0.39 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 N288_18905 98cc47cb3504612d6b71212573ee6a9a 203 SMART SM00278 107 126 4.8 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 N288_14460 482db2187f43e428063565e7a7e42320 147 Pfam PF00571 CBS domain 87 129 4.3E-4 T 12-10-2018 IPR000644 CBS domain N288_14460 482db2187f43e428063565e7a7e42320 147 Pfam PF00571 CBS domain 12 59 2.4E-8 T 12-10-2018 IPR000644 CBS domain N288_14460 482db2187f43e428063565e7a7e42320 147 Gene3D G3DSA:3.10.580.10 1 141 4.9E-41 T 12-10-2018 N288_14460 482db2187f43e428063565e7a7e42320 147 SUPERFAMILY SSF54631 1 131 8.59E-26 T 12-10-2018 N288_17800 0cc40d5acac3397a5b103153f25a9683 281 Gene3D G3DSA:3.10.290.10 1 64 4.4E-23 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 N288_17800 0cc40d5acac3397a5b103153f25a9683 281 Gene3D G3DSA:3.40.50.150 65 281 8.9E-85 T 12-10-2018 N288_17800 0cc40d5acac3397a5b103153f25a9683 281 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 7 239 4.5E-95 T 12-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 N288_17800 0cc40d5acac3397a5b103153f25a9683 281 SMART SM00363 6 71 1.3E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_17800 0cc40d5acac3397a5b103153f25a9683 281 Pfam PF01479 S4 domain 6 48 4.1E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_17800 0cc40d5acac3397a5b103153f25a9683 281 Pfam PF01728 FtsJ-like methyltransferase 62 244 3.5E-19 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 N288_17800 0cc40d5acac3397a5b103153f25a9683 281 SUPERFAMILY SSF55174 5 71 2.21E-12 T 12-10-2018 N288_17800 0cc40d5acac3397a5b103153f25a9683 281 SUPERFAMILY SSF53335 56 246 4.4E-21 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_17800 0cc40d5acac3397a5b103153f25a9683 281 PIRSF PIRSF005578 1 270 7.5E-106 T 12-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 N288_21515 c0423fddabdb95bd348284dd118cfb74 519 SUPERFAMILY SSF55073 357 513 6.83E-45 T 12-10-2018 IPR029787 Nucleotide cyclase N288_21515 c0423fddabdb95bd348284dd118cfb74 519 Pfam PF00990 Diguanylate cyclase, GGDEF domain 353 508 4.1E-40 T 12-10-2018 IPR000160 GGDEF domain N288_21515 c0423fddabdb95bd348284dd118cfb74 519 Pfam PF13188 PAS domain 239 281 3.2E-6 T 12-10-2018 IPR000014 PAS domain N288_21515 c0423fddabdb95bd348284dd118cfb74 519 Gene3D G3DSA:3.30.70.270 343 514 1.3E-51 T 12-10-2018 N288_21515 c0423fddabdb95bd348284dd118cfb74 519 Pfam PF16927 N-terminal 7TM region of histidine kinase 12 231 1.4E-45 T 12-10-2018 IPR031621 Histidine kinase, N-terminal 7TM region N288_21515 c0423fddabdb95bd348284dd118cfb74 519 SMART SM00267 341 512 3.7E-52 T 12-10-2018 IPR000160 GGDEF domain N288_21515 c0423fddabdb95bd348284dd118cfb74 519 Gene3D G3DSA:3.30.450.20 236 341 1.1E-8 T 12-10-2018 N288_21515 c0423fddabdb95bd348284dd118cfb74 519 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 348 511 6.3E-44 T 12-10-2018 IPR000160 GGDEF domain N288_25620 ee91ab8a22c396439cd8b4019a8169a7 274 SUPERFAMILY SSF52091 161 253 1.33E-10 T 12-10-2018 IPR036513 STAS domain superfamily N288_25620 ee91ab8a22c396439cd8b4019a8169a7 274 Gene3D G3DSA:3.30.750.24 158 274 3.7E-31 T 12-10-2018 IPR036513 STAS domain superfamily N288_25620 ee91ab8a22c396439cd8b4019a8169a7 274 Pfam PF01740 STAS domain 165 266 4.8E-6 T 12-10-2018 IPR002645 STAS domain N288_19005 c9e6ccbcbd31dc770d7388ce398816e2 492 Pfam PF10150 Ribonuclease E/G family 123 385 1.3E-81 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 N288_19005 c9e6ccbcbd31dc770d7388ce398816e2 492 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 418 3.5E-114 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 N288_19005 c9e6ccbcbd31dc770d7388ce398816e2 492 Gene3D G3DSA:2.40.50.140 32 126 2.9E-26 T 12-10-2018 N288_19005 c9e6ccbcbd31dc770d7388ce398816e2 492 SMART SM00316 37 120 3.7E-7 T 12-10-2018 IPR022967 RNA-binding domain, S1 N288_19005 c9e6ccbcbd31dc770d7388ce398816e2 492 SUPERFAMILY SSF50249 39 123 2.12E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_26005 6aee02c7f4162f0bad71c20990937b67 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 N288_26005 6aee02c7f4162f0bad71c20990937b67 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 623 42.528 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 N288_26005 6aee02c7f4162f0bad71c20990937b67 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 N288_26005 6aee02c7f4162f0bad71c20990937b67 629 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 1.0E-5 T 12-10-2018 N288_26005 6aee02c7f4162f0bad71c20990937b67 629 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 161 1.0E-5 T 12-10-2018 N288_26005 6aee02c7f4162f0bad71c20990937b67 629 Gene3D G3DSA:1.10.10.1800 459 549 1.2E-25 T 12-10-2018 N288_26005 6aee02c7f4162f0bad71c20990937b67 629 Pfam PF13932 GidA associated domain 401 615 6.6E-80 T 12-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 N288_26005 6aee02c7f4162f0bad71c20990937b67 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 620 1.6E-297 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 N288_26005 6aee02c7f4162f0bad71c20990937b67 629 SUPERFAMILY SSF51905 7 261 1.45E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_26005 6aee02c7f4162f0bad71c20990937b67 629 Gene3D G3DSA:3.50.50.60 296 458 3.5E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_26005 6aee02c7f4162f0bad71c20990937b67 629 Gene3D G3DSA:3.50.50.60 1 221 5.9E-82 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_26005 6aee02c7f4162f0bad71c20990937b67 629 Pfam PF01134 Glucose inhibited division protein A 9 399 2.9E-172 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 N288_26005 6aee02c7f4162f0bad71c20990937b67 629 SMART SM01228 545 616 6.5E-41 T 12-10-2018 N288_26005 6aee02c7f4162f0bad71c20990937b67 629 Gene3D G3DSA:1.10.150.570 568 620 3.0E-24 T 12-10-2018 N288_03965 6b8aa7e9b0a36fb85e99ae23ba2e0cee 370 SUPERFAMILY SSF52540 22 162 2.87E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_03965 6b8aa7e9b0a36fb85e99ae23ba2e0cee 370 Pfam PF05128 Domain of unknown function (DUF697) 238 365 5.3E-6 T 12-10-2018 IPR021147 Protein of unknown function DUF697 N288_03965 6b8aa7e9b0a36fb85e99ae23ba2e0cee 370 Pfam PF01926 50S ribosome-binding GTPase 28 149 8.7E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_03965 6b8aa7e9b0a36fb85e99ae23ba2e0cee 370 Gene3D G3DSA:3.40.50.300 2 227 1.7E-25 T 12-10-2018 N288_00955 fb9ce7782349552b75529c4573325517 250 Pfam PF01522 Polysaccharide deacetylase 51 172 1.9E-24 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 N288_00955 fb9ce7782349552b75529c4573325517 250 Gene3D G3DSA:3.20.20.370 48 250 4.2E-56 T 12-10-2018 N288_00955 fb9ce7782349552b75529c4573325517 250 TIGRFAM TIGR02764 spore_ybaN_pdaB: polysaccharide deacetylase family sporulation protein PdaB 53 239 2.3E-76 T 12-10-2018 IPR014132 Sporulation polysaccharide deacetylase, PdaB N288_00955 fb9ce7782349552b75529c4573325517 250 SUPERFAMILY SSF88713 20 239 5.44E-49 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 N288_26010 46041c64b971e61fd61deb4ccc7069e8 461 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 126 1.8E-40 T 12-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 N288_26010 46041c64b971e61fd61deb4ccc7069e8 461 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 227 373 1.0E-27 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 N288_26010 46041c64b971e61fd61deb4ccc7069e8 461 SUPERFAMILY SSF52540 80 377 1.7E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_26010 46041c64b971e61fd61deb4ccc7069e8 461 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 461 9.0E-131 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 N288_26010 46041c64b971e61fd61deb4ccc7069e8 461 Pfam PF12631 MnmE helical domain 129 458 5.8E-59 T 12-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 N288_26010 46041c64b971e61fd61deb4ccc7069e8 461 PRINTS PR00449 Transforming protein P21 ras signature 224 245 2.4E-6 T 12-10-2018 N288_26010 46041c64b971e61fd61deb4ccc7069e8 461 PRINTS PR00449 Transforming protein P21 ras signature 264 286 2.4E-6 T 12-10-2018 N288_26010 46041c64b971e61fd61deb4ccc7069e8 461 PRINTS PR00449 Transforming protein P21 ras signature 328 341 2.4E-6 T 12-10-2018 N288_26010 46041c64b971e61fd61deb4ccc7069e8 461 Pfam PF01926 50S ribosome-binding GTPase 227 338 1.5E-26 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_26010 46041c64b971e61fd61deb4ccc7069e8 461 Gene3D G3DSA:1.20.120.430 127 461 1.4E-107 T 12-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 N288_26010 46041c64b971e61fd61deb4ccc7069e8 461 Gene3D G3DSA:3.30.1360.120 1 126 2.2E-48 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 N288_26010 46041c64b971e61fd61deb4ccc7069e8 461 Gene3D G3DSA:3.40.50.300 224 389 1.4E-107 T 12-10-2018 N288_26010 46041c64b971e61fd61deb4ccc7069e8 461 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 461 34.455 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 N288_17270 38ae3c2b649190d1d128cd788bc737e5 524 SUPERFAMILY SSF51735 95 279 1.27E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_17270 38ae3c2b649190d1d128cd788bc737e5 524 Gene3D G3DSA:3.40.50.720 95 276 1.0E-115 T 12-10-2018 N288_17270 38ae3c2b649190d1d128cd788bc737e5 524 Gene3D G3DSA:3.40.50.720 5 301 1.0E-115 T 12-10-2018 N288_17270 38ae3c2b649190d1d128cd788bc737e5 524 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 218 234 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site N288_17270 38ae3c2b649190d1d128cd788bc737e5 524 Gene3D G3DSA:3.30.70.260 451 524 6.3E-21 T 12-10-2018 N288_17270 38ae3c2b649190d1d128cd788bc737e5 524 Pfam PF01842 ACT domain 455 499 1.3E-8 T 12-10-2018 IPR002912 ACT domain N288_17270 38ae3c2b649190d1d128cd788bc737e5 524 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 3 523 1.5E-201 T 12-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 N288_17270 38ae3c2b649190d1d128cd788bc737e5 524 SUPERFAMILY SSF52283 2 132 9.26E-33 T 12-10-2018 N288_17270 38ae3c2b649190d1d128cd788bc737e5 524 Gene3D G3DSA:3.30.1330.90 315 450 3.0E-30 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 N288_17270 38ae3c2b649190d1d128cd788bc737e5 524 SUPERFAMILY SSF55021 440 522 9.82E-18 T 12-10-2018 N288_17270 38ae3c2b649190d1d128cd788bc737e5 524 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 278 1.5E-63 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 N288_17270 38ae3c2b649190d1d128cd788bc737e5 524 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 29 310 4.1E-34 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 N288_17270 38ae3c2b649190d1d128cd788bc737e5 524 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 141 168 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 N288_17270 38ae3c2b649190d1d128cd788bc737e5 524 SUPERFAMILY SSF143548 316 446 1.75E-32 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 N288_17270 38ae3c2b649190d1d128cd788bc737e5 524 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 189 211 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site N288_13170 97c67234c5eec32780af73fec4c4ef41 459 Pfam PF00324 Amino acid permease 31 445 1.4E-51 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 N288_13170 97c67234c5eec32780af73fec4c4ef41 459 PIRSF PIRSF006060 7 456 1.9E-53 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 N288_13170 97c67234c5eec32780af73fec4c4ef41 459 Gene3D G3DSA:1.20.1740.10 19 457 4.9E-50 T 12-10-2018 N288_16850 e35062cfd1c614e2094942aa4b5ff134 235 SUPERFAMILY SSF46785 27 87 8.51E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_16850 e35062cfd1c614e2094942aa4b5ff134 235 Gene3D G3DSA:1.10.10.10 1 110 1.3E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_16850 e35062cfd1c614e2094942aa4b5ff134 235 Gene3D G3DSA:1.10.10.630 111 200 3.0E-33 T 12-10-2018 IPR034829 DnaD-like domain superfamily N288_16850 e35062cfd1c614e2094942aa4b5ff134 235 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 128 199 1.7E-26 T 12-10-2018 IPR006343 DnaD domain N288_16850 e35062cfd1c614e2094942aa4b5ff134 235 SUPERFAMILY SSF158499 129 194 1.05E-20 T 12-10-2018 IPR034829 DnaD-like domain superfamily N288_16850 e35062cfd1c614e2094942aa4b5ff134 235 Pfam PF07261 Replication initiation and membrane attachment 132 200 8.5E-27 T 12-10-2018 IPR006343 DnaD domain N288_10185 d514ab1ff3b019d8e4dd5ebcffba3826 182 Pfam PF10628 Outer spore coat protein E (CotE) 3 176 1.2E-70 T 12-10-2018 IPR018901 Spore coat protein CotE N288_24180 9bf43dc40636c372b0c96fc4dd98e57a 361 Gene3D G3DSA:2.120.10.30 21 360 1.6E-100 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like N288_24180 9bf43dc40636c372b0c96fc4dd98e57a 361 SUPERFAMILY SSF50952 45 339 4.05E-36 T 12-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 N288_24180 9bf43dc40636c372b0c96fc4dd98e57a 361 Pfam PF07995 Glucose / Sorbosone dehydrogenase 51 344 1.7E-65 T 12-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase N288_09380 f54066b6e1397a82fd478516b1e85a44 313 Pfam PF03755 YicC-like family, N-terminal region 24 178 7.9E-39 T 12-10-2018 IPR013527 YicC-like, N-terminal N288_09380 f54066b6e1397a82fd478516b1e85a44 313 Pfam PF08340 Domain of unknown function (DUF1732) 230 313 6.9E-37 T 12-10-2018 IPR013551 Domain of unknown function DUF1732 N288_09380 f54066b6e1397a82fd478516b1e85a44 313 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 24 313 9.3E-85 T 12-10-2018 IPR005229 Conserved hypothetical protein CHP00255 N288_09110 cb2cdbc82a4ab6ac37ab9f209cf40e25 458 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 125 332 7.9E-74 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_09110 cb2cdbc82a4ab6ac37ab9f209cf40e25 458 SMART SM00878 346 451 4.7E-40 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 N288_09110 cb2cdbc82a4ab6ac37ab9f209cf40e25 458 SUPERFAMILY SSF52440 11 123 8.63E-47 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily N288_09110 cb2cdbc82a4ab6ac37ab9f209cf40e25 458 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 163 177 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_09110 cb2cdbc82a4ab6ac37ab9f209cf40e25 458 Gene3D G3DSA:3.30.470.130 3 457 5.3E-189 T 12-10-2018 N288_09110 cb2cdbc82a4ab6ac37ab9f209cf40e25 458 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_09110 cb2cdbc82a4ab6ac37ab9f209cf40e25 458 Pfam PF02785 Biotin carboxylase C-terminal domain 346 451 1.6E-33 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 N288_09110 cb2cdbc82a4ab6ac37ab9f209cf40e25 458 SUPERFAMILY SSF56059 93 356 1.03E-67 T 12-10-2018 N288_09110 cb2cdbc82a4ab6ac37ab9f209cf40e25 458 SUPERFAMILY SSF51246 341 452 1.46E-34 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 N288_09110 cb2cdbc82a4ab6ac37ab9f209cf40e25 458 Pfam PF00289 Biotin carboxylase, N-terminal domain 12 120 5.6E-44 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 N288_17700 708aa48e2f63113c5ec42914b1b95fd4 145 Pfam PF06491 Disulphide isomerase 8 142 6.2E-63 T 12-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family N288_17700 708aa48e2f63113c5ec42914b1b95fd4 145 Gene3D G3DSA:3.40.30.10 25 142 4.8E-55 T 12-10-2018 N288_17700 708aa48e2f63113c5ec42914b1b95fd4 145 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 8 142 2.4E-63 T 12-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family N288_25520 99d191d273c5f321bffd32defb8925d6 365 SUPERFAMILY SSF103473 4 356 8.89E-33 T 12-10-2018 IPR036259 MFS transporter superfamily N288_25520 99d191d273c5f321bffd32defb8925d6 365 Pfam PF12832 MFS_1 like family 62 330 1.1E-34 T 12-10-2018 IPR024989 Major facilitator superfamily associated domain N288_25520 99d191d273c5f321bffd32defb8925d6 365 PIRSF PIRSF004925 2 362 6.3E-65 T 12-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter N288_25520 99d191d273c5f321bffd32defb8925d6 365 Gene3D G3DSA:1.20.1250.20 167 360 3.0E-29 T 12-10-2018 N288_25520 99d191d273c5f321bffd32defb8925d6 365 Gene3D G3DSA:1.20.1250.20 1 153 2.9E-9 T 12-10-2018 N288_20870 6dc5d95f5148d4dd4cd2939d37084b32 500 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 345 352 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 N288_20870 6dc5d95f5148d4dd4cd2939d37084b32 500 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 184 489 1.5E-113 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 N288_20870 6dc5d95f5148d4dd4cd2939d37084b32 500 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 2 498 35.261 T 12-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 N288_20870 6dc5d95f5148d4dd4cd2939d37084b32 500 Gene3D G3DSA:3.40.630.10 170 495 1.5E-123 T 12-10-2018 N288_20870 6dc5d95f5148d4dd4cd2939d37084b32 500 SUPERFAMILY SSF52949 14 181 2.0E-36 T 12-10-2018 N288_20870 6dc5d95f5148d4dd4cd2939d37084b32 500 PRINTS PR00481 Cytosol aminopeptidase signature 282 303 5.3E-52 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 N288_20870 6dc5d95f5148d4dd4cd2939d37084b32 500 PRINTS PR00481 Cytosol aminopeptidase signature 369 384 5.3E-52 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 N288_20870 6dc5d95f5148d4dd4cd2939d37084b32 500 PRINTS PR00481 Cytosol aminopeptidase signature 319 340 5.3E-52 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 N288_20870 6dc5d95f5148d4dd4cd2939d37084b32 500 PRINTS PR00481 Cytosol aminopeptidase signature 260 277 5.3E-52 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 N288_20870 6dc5d95f5148d4dd4cd2939d37084b32 500 PRINTS PR00481 Cytosol aminopeptidase signature 341 361 5.3E-52 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 N288_20870 6dc5d95f5148d4dd4cd2939d37084b32 500 SUPERFAMILY SSF53187 180 493 2.32E-110 T 12-10-2018 N288_20870 6dc5d95f5148d4dd4cd2939d37084b32 500 Gene3D G3DSA:3.40.220.10 3 157 2.2E-44 T 12-10-2018 N288_20870 6dc5d95f5148d4dd4cd2939d37084b32 500 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 18 146 1.9E-30 T 12-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 N288_25465 d6d5255b67f397157e48239a52bdb413 157 SUPERFAMILY SSF55729 2 155 4.15E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_25465 d6d5255b67f397157e48239a52bdb413 157 Gene3D G3DSA:3.40.630.30 4 157 1.3E-35 T 12-10-2018 N288_25465 d6d5255b67f397157e48239a52bdb413 157 Pfam PF00583 Acetyltransferase (GNAT) family 27 145 9.3E-15 T 12-10-2018 IPR000182 GNAT domain N288_17055 0ed3de1350a8e6531c728f4bfdf522e9 78 Hamap MF_00798 Transcription attenuation protein MtrB [mtrB]. 3 75 28.417 T 12-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 N288_17055 0ed3de1350a8e6531c728f4bfdf522e9 78 Gene3D G3DSA:2.60.40.50 1 78 1.0E-42 T 12-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily N288_17055 0ed3de1350a8e6531c728f4bfdf522e9 78 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 11 28 1.5E-35 T 12-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 N288_17055 0ed3de1350a8e6531c728f4bfdf522e9 78 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 28 44 1.5E-35 T 12-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 N288_17055 0ed3de1350a8e6531c728f4bfdf522e9 78 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 44 60 1.5E-35 T 12-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 N288_17055 0ed3de1350a8e6531c728f4bfdf522e9 78 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 60 76 1.5E-35 T 12-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 N288_17055 0ed3de1350a8e6531c728f4bfdf522e9 78 SUPERFAMILY SSF51219 10 76 3.66E-35 T 12-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily N288_17055 0ed3de1350a8e6531c728f4bfdf522e9 78 Pfam PF02081 Tryptophan RNA-binding attenuator protein 9 75 3.7E-42 T 12-10-2018 IPR023558 Tryptophan RNA-binding attenuator protein domain N288_00815 4c135790e787109834c01c5a0d333fcb 178 PIRSF PIRSF002162 1 177 3.6E-51 T 12-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00815 4c135790e787109834c01c5a0d333fcb 178 Gene3D G3DSA:3.90.930.12 1 82 1.7E-34 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00815 4c135790e787109834c01c5a0d333fcb 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 39.813 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 N288_00815 4c135790e787109834c01c5a0d333fcb 178 SUPERFAMILY SSF56053 1 82 2.64E-29 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00815 4c135790e787109834c01c5a0d333fcb 178 Pfam PF00347 Ribosomal protein L6 90 164 1.4E-20 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00815 4c135790e787109834c01c5a0d333fcb 178 Pfam PF00347 Ribosomal protein L6 11 82 3.7E-23 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00815 4c135790e787109834c01c5a0d333fcb 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 12-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00815 4c135790e787109834c01c5a0d333fcb 178 Gene3D G3DSA:3.90.930.12 83 178 2.7E-39 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00815 4c135790e787109834c01c5a0d333fcb 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 3.0E-77 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 N288_00815 4c135790e787109834c01c5a0d333fcb 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.3E-34 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 N288_00815 4c135790e787109834c01c5a0d333fcb 178 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.3E-34 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 N288_00815 4c135790e787109834c01c5a0d333fcb 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.3E-34 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 N288_00815 4c135790e787109834c01c5a0d333fcb 178 SUPERFAMILY SSF56053 83 177 5.47E-35 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_06300 a764f1801d7962d1042a81b829b3916f 121 SMART SM00418 34 113 7.8E-34 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_06300 a764f1801d7962d1042a81b829b3916f 121 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 58 76 - T 12-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 N288_06300 a764f1801d7962d1042a81b829b3916f 121 SUPERFAMILY SSF46785 21 115 5.03E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_06300 a764f1801d7962d1042a81b829b3916f 121 Gene3D G3DSA:1.10.10.10 1 120 5.7E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_06300 a764f1801d7962d1042a81b829b3916f 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 51 1.4E-22 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_06300 a764f1801d7962d1042a81b829b3916f 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 67 1.4E-22 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_06300 a764f1801d7962d1042a81b829b3916f 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 84 99 1.4E-22 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_06300 a764f1801d7962d1042a81b829b3916f 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 1.4E-22 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_06300 a764f1801d7962d1042a81b829b3916f 121 Pfam PF01022 Bacterial regulatory protein, arsR family 41 87 1.1E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_06800 a9427ad42132106e8e0a4705e0bcb1f5 27 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 4 26 1.7E-13 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like N288_06800 a9427ad42132106e8e0a4705e0bcb1f5 27 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 2 27 4.1E-15 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like N288_09940 b0b0d5b7b4303f032f2e8931365de07c 100 SUPERFAMILY SSF55315 4 99 1.96E-26 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like N288_09940 b0b0d5b7b4303f032f2e8931365de07c 100 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 5 95 1.2E-19 T 12-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 N288_09940 b0b0d5b7b4303f032f2e8931365de07c 100 ProSitePatterns PS01082 Ribosomal protein L7Ae signature. 56 73 - T 12-10-2018 IPR004037 Ribosomal protein L7Ae conserved site GO:0042254|GO:1990904 Reactome: R-HSA-6791226 N288_09940 b0b0d5b7b4303f032f2e8931365de07c 100 Gene3D G3DSA:3.30.1330.30 1 100 1.3E-38 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like N288_14630 ef701b4af203ece8ae1d717aa79a707b 238 SMART SM00862 154 230 9.8E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_14630 ef701b4af203ece8ae1d717aa79a707b 238 SMART SM00448 5 115 8.5E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_14630 ef701b4af203ece8ae1d717aa79a707b 238 Pfam PF00072 Response regulator receiver domain 8 115 5.8E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_14630 ef701b4af203ece8ae1d717aa79a707b 238 Gene3D G3DSA:1.10.10.10 132 238 8.0E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_14630 ef701b4af203ece8ae1d717aa79a707b 238 SUPERFAMILY SSF46894 137 230 3.06E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_14630 ef701b4af203ece8ae1d717aa79a707b 238 Gene3D G3DSA:3.40.50.2300 1 131 1.8E-37 T 12-10-2018 N288_14630 ef701b4af203ece8ae1d717aa79a707b 238 SUPERFAMILY SSF52172 4 171 8.68E-40 T 12-10-2018 IPR011006 CheY-like superfamily N288_14630 ef701b4af203ece8ae1d717aa79a707b 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 7.2E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_06790 6a525fa58b8c3279d8c67da19a357e8d 61 Pfam PF14147 Sporulation protein YhaL 2 53 1.7E-25 T 12-10-2018 IPR025428 Sporulation protein YhaL N288_14285 4af8d066b0f5e2d4590e40f52744c596 596 Pfam PF01432 Peptidase family M3 203 583 3.4E-66 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 N288_14285 4af8d066b0f5e2d4590e40f52744c596 596 SUPERFAMILY SSF55486 6 579 1.22E-116 T 12-10-2018 N288_14285 4af8d066b0f5e2d4590e40f52744c596 596 Gene3D G3DSA:1.10.287.830 180 225 2.6E-14 T 12-10-2018 N288_14285 4af8d066b0f5e2d4590e40f52744c596 596 Gene3D G3DSA:1.10.1370.20 227 596 8.8E-132 T 12-10-2018 N288_14285 4af8d066b0f5e2d4590e40f52744c596 596 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 7 594 2.2E-191 T 12-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 N288_14285 4af8d066b0f5e2d4590e40f52744c596 596 Pfam PF08439 Oligopeptidase F 114 182 2.3E-18 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain N288_14285 4af8d066b0f5e2d4590e40f52744c596 596 Gene3D G3DSA:1.20.140.70 24 178 5.6E-43 T 12-10-2018 N288_03385 3102f3cf013d5f61472ab13f07a798d1 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 219 3.0E-18 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 N288_03385 3102f3cf013d5f61472ab13f07a798d1 313 Gene3D G3DSA:3.40.50.720 1 310 1.1E-33 T 12-10-2018 N288_03385 3102f3cf013d5f61472ab13f07a798d1 313 SUPERFAMILY SSF51735 1 308 6.57E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_02940 1d5a60e8c06457495f90eae57cf56a08 79 Pfam PF01381 Helix-turn-helix 14 66 1.7E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_02940 1d5a60e8c06457495f90eae57cf56a08 79 SMART SM00530 12 67 7.2E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_02940 1d5a60e8c06457495f90eae57cf56a08 79 SUPERFAMILY SSF47413 8 74 6.44E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_02940 1d5a60e8c06457495f90eae57cf56a08 79 Gene3D G3DSA:1.10.260.40 8 72 6.0E-23 T 12-10-2018 N288_05575 5a24811135d27c000e05507066734c62 351 SUPERFAMILY SSF53187 4 349 3.14E-49 T 12-10-2018 N288_05575 5a24811135d27c000e05507066734c62 351 Pfam PF01546 Peptidase family M20/M25/M40 63 349 3.4E-22 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_05575 5a24811135d27c000e05507066734c62 351 Gene3D G3DSA:3.30.70.360 160 269 6.0E-85 T 12-10-2018 N288_05575 5a24811135d27c000e05507066734c62 351 Pfam PF07687 Peptidase dimerisation domain 159 256 3.2E-21 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain N288_05575 5a24811135d27c000e05507066734c62 351 SUPERFAMILY SSF55031 161 260 7.03E-20 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_05575 5a24811135d27c000e05507066734c62 351 Gene3D G3DSA:3.40.630.10 5 333 6.0E-85 T 12-10-2018 N288_01490 61208e077a627c280dbce48d8a33bba4 476 PIRSF PIRSF026631 1 476 4.2E-123 T 12-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 N288_01490 61208e077a627c280dbce48d8a33bba4 476 Pfam PF03703 Bacterial PH domain 393 472 6.2E-14 T 12-10-2018 IPR005182 Domain of unknown function DUF304 N288_01490 61208e077a627c280dbce48d8a33bba4 476 Pfam PF03703 Bacterial PH domain 63 143 5.9E-19 T 12-10-2018 IPR005182 Domain of unknown function DUF304 N288_01490 61208e077a627c280dbce48d8a33bba4 476 Pfam PF03703 Bacterial PH domain 245 322 6.9E-15 T 12-10-2018 IPR005182 Domain of unknown function DUF304 N288_22485 3d0891012eca1451a7087a8f547c5f4a 336 Gene3D G3DSA:3.40.50.2300 163 292 4.8E-68 T 12-10-2018 N288_22485 3d0891012eca1451a7087a8f547c5f4a 336 SUPERFAMILY SSF53822 61 319 1.28E-56 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_22485 3d0891012eca1451a7087a8f547c5f4a 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 51 7.3E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_22485 3d0891012eca1451a7087a8f547c5f4a 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 12-10-2018 N288_22485 3d0891012eca1451a7087a8f547c5f4a 336 Gene3D G3DSA:3.40.50.2300 65 317 4.8E-68 T 12-10-2018 N288_22485 3d0891012eca1451a7087a8f547c5f4a 336 Pfam PF13377 Periplasmic binding protein-like domain 171 333 2.1E-28 T 12-10-2018 N288_22485 3d0891012eca1451a7087a8f547c5f4a 336 Gene3D G3DSA:1.10.260.40 1 63 7.8E-21 T 12-10-2018 N288_22485 3d0891012eca1451a7087a8f547c5f4a 336 SUPERFAMILY SSF47413 2 62 3.05E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_22485 3d0891012eca1451a7087a8f547c5f4a 336 SMART SM00354 3 74 5.8E-29 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_14430 5ca573bfa1028b2d1ef701cc071380fe 303 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 53 276 1.0E-46 T 12-10-2018 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 N288_14430 5ca573bfa1028b2d1ef701cc071380fe 303 Gene3D G3DSA:3.90.1200.10 121 242 1.4E-5 T 12-10-2018 N288_14430 5ca573bfa1028b2d1ef701cc071380fe 303 SUPERFAMILY SSF56112 25 276 5.98E-28 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_13760 c3e59cfdd2709accdc5199b8d704fa39 255 Gene3D G3DSA:3.30.750.24 145 255 5.0E-33 T 12-10-2018 IPR036513 STAS domain superfamily N288_13760 c3e59cfdd2709accdc5199b8d704fa39 255 Pfam PF01740 STAS domain 152 253 2.0E-11 T 12-10-2018 IPR002645 STAS domain N288_13760 c3e59cfdd2709accdc5199b8d704fa39 255 SUPERFAMILY SSF52091 148 252 1.35E-18 T 12-10-2018 IPR036513 STAS domain superfamily N288_18765 5a67d5c992a68809b643a1dd618143ef 806 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 14 758 29.564 T 12-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 N288_18765 5a67d5c992a68809b643a1dd618143ef 806 SUPERFAMILY SSF52540 339 738 3.88E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_18765 5a67d5c992a68809b643a1dd618143ef 806 Gene3D G3DSA:3.40.50.300 516 745 5.9E-145 T 12-10-2018 N288_18765 5a67d5c992a68809b643a1dd618143ef 806 Gene3D G3DSA:1.10.10.2220 200 307 3.5E-14 T 12-10-2018 N288_18765 5a67d5c992a68809b643a1dd618143ef 806 Gene3D G3DSA:2.30.30.940 602 682 5.9E-145 T 12-10-2018 N288_18765 5a67d5c992a68809b643a1dd618143ef 806 Pfam PF13538 UvrD-like helicase C-terminal domain 682 729 3.5E-16 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain N288_18765 5a67d5c992a68809b643a1dd618143ef 806 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 24 755 2.2E-253 T 12-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 N288_18765 5a67d5c992a68809b643a1dd618143ef 806 Pfam PF14490 Helix-hairpin-helix containing domain 158 249 9.7E-30 T 12-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain N288_18765 5a67d5c992a68809b643a1dd618143ef 806 Pfam PF13604 AAA domain 345 551 5.7E-50 T 12-10-2018 N288_18765 5a67d5c992a68809b643a1dd618143ef 806 Gene3D G3DSA:3.40.50.300 337 751 5.9E-145 T 12-10-2018 N288_01275 58ea4cdee1a30a52ad40344ec946839a 391 Gene3D G3DSA:1.20.1250.20 5 198 3.3E-26 T 12-10-2018 N288_01275 58ea4cdee1a30a52ad40344ec946839a 391 SUPERFAMILY SSF103473 5 375 2.22E-58 T 12-10-2018 IPR036259 MFS transporter superfamily N288_01275 58ea4cdee1a30a52ad40344ec946839a 391 Pfam PF07690 Major Facilitator Superfamily 9 335 2.5E-39 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_01275 58ea4cdee1a30a52ad40344ec946839a 391 PRINTS PR01035 Tetracycline resistance protein signature 40 59 3.6E-6 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 N288_01275 58ea4cdee1a30a52ad40344ec946839a 391 PRINTS PR01035 Tetracycline resistance protein signature 98 119 3.6E-6 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 N288_01275 58ea4cdee1a30a52ad40344ec946839a 391 PRINTS PR01035 Tetracycline resistance protein signature 158 178 3.6E-6 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 N288_01275 58ea4cdee1a30a52ad40344ec946839a 391 Gene3D G3DSA:1.20.1250.20 199 387 9.5E-22 T 12-10-2018 N288_12275 8698aabe80d8fb1c1879daed53548151 642 SUPERFAMILY SSF52540 292 513 9.37E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_12275 8698aabe80d8fb1c1879daed53548151 642 Gene3D G3DSA:3.40.50.300 290 566 1.6E-73 T 12-10-2018 N288_12275 8698aabe80d8fb1c1879daed53548151 642 PIRSF PIRSF005814 514 634 1.6 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 N288_12275 8698aabe80d8fb1c1879daed53548151 642 PIRSF PIRSF005814 1 552 5.6E-181 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 N288_12275 8698aabe80d8fb1c1879daed53548151 642 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 406 422 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 N288_12275 8698aabe80d8fb1c1879daed53548151 642 Pfam PF00488 MutS domain V 327 505 2.9E-35 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 N288_12275 8698aabe80d8fb1c1879daed53548151 642 SMART SM00533 4 311 4.3E-6 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 N288_12275 8698aabe80d8fb1c1879daed53548151 642 SUPERFAMILY SSF48334 64 279 7.85E-12 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily N288_12275 8698aabe80d8fb1c1879daed53548151 642 SMART SM00534 324 509 6.1E-64 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 N288_20875 ceb0a6dbee4abca091f4073dad8c38bc 125 Gene3D G3DSA:1.10.3450.10 5 116 9.8E-21 T 12-10-2018 N288_20875 ceb0a6dbee4abca091f4073dad8c38bc 125 SUPERFAMILY SSF140663 2 120 1.28E-32 T 12-10-2018 IPR023203 TTHA0068-like superfamily N288_20875 ceb0a6dbee4abca091f4073dad8c38bc 125 Pfam PF03745 Domain of unknown function (DUF309) 9 61 1.9E-19 T 12-10-2018 IPR005500 Protein of unknown function DUF309 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 SUPERFAMILY SSF51905 9 369 9.73E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 Gene3D G3DSA:3.30.390.30 349 474 7.7E-31 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 330 1.1E-56 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 457 7.6E-26 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 PIRSF PIRSF000350 2 443 6.3E-80 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 5.1E-30 T 12-10-2018 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 5.1E-30 T 12-10-2018 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 5.1E-30 T 12-10-2018 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 5.1E-30 T 12-10-2018 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 5.1E-30 T 12-10-2018 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 3.3E-57 T 12-10-2018 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 3.3E-57 T 12-10-2018 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 3.3E-57 T 12-10-2018 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 3.3E-57 T 12-10-2018 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 3.3E-57 T 12-10-2018 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 3.3E-57 T 12-10-2018 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 3.3E-57 T 12-10-2018 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 3.3E-57 T 12-10-2018 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 3.3E-57 T 12-10-2018 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 Gene3D G3DSA:3.50.50.60 13 335 6.9E-97 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 SUPERFAMILY SSF55424 345 468 2.41E-30 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 N288_11530 b93e9d6708ed3c143afc4ccfdf585628 476 Gene3D G3DSA:3.50.50.60 152 273 6.9E-97 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_07010 f396c24c784ab35253cdf4ff15a7cbdc 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 1.7E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_07010 f396c24c784ab35253cdf4ff15a7cbdc 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 3.3E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_07010 f396c24c784ab35253cdf4ff15a7cbdc 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 3.3E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_07010 f396c24c784ab35253cdf4ff15a7cbdc 190 SUPERFAMILY SSF46689 4 76 2.04E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_07010 f396c24c784ab35253cdf4ff15a7cbdc 190 SUPERFAMILY SSF48498 82 188 1.21E-15 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily N288_07010 f396c24c784ab35253cdf4ff15a7cbdc 190 Gene3D G3DSA:1.10.10.60 2 49 1.1E-16 T 12-10-2018 N288_07010 f396c24c784ab35253cdf4ff15a7cbdc 190 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 51 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site N288_07010 f396c24c784ab35253cdf4ff15a7cbdc 190 Gene3D G3DSA:1.10.357.10 50 190 8.9E-19 T 12-10-2018 N288_23555 916a7738d62ac82a5f5f4d7f361a76b4 333 SUPERFAMILY SSF53067 3 140 2.33E-39 T 12-10-2018 N288_23555 916a7738d62ac82a5f5f4d7f361a76b4 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 124 143 6.1E-59 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_23555 916a7738d62ac82a5f5f4d7f361a76b4 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 61 84 6.1E-59 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_23555 916a7738d62ac82a5f5f4d7f361a76b4 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 41 59 6.1E-59 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_23555 916a7738d62ac82a5f5f4d7f361a76b4 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 179 199 6.1E-59 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_23555 916a7738d62ac82a5f5f4d7f361a76b4 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 292 318 6.1E-59 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_23555 916a7738d62ac82a5f5f4d7f361a76b4 333 Gene3D G3DSA:3.90.640.10 178 251 8.6E-128 T 12-10-2018 N288_23555 916a7738d62ac82a5f5f4d7f361a76b4 333 Pfam PF06723 MreB/Mbl protein 4 327 2.5E-150 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_23555 916a7738d62ac82a5f5f4d7f361a76b4 333 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 2 327 5.9E-137 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_23555 916a7738d62ac82a5f5f4d7f361a76b4 333 Gene3D G3DSA:3.30.420.40 146 309 8.6E-128 T 12-10-2018 N288_23555 916a7738d62ac82a5f5f4d7f361a76b4 333 SUPERFAMILY SSF53067 142 325 9.88E-49 T 12-10-2018 N288_23555 916a7738d62ac82a5f5f4d7f361a76b4 333 Gene3D G3DSA:3.30.420.40 6 319 8.6E-128 T 12-10-2018 N288_03265 48e43928c33b713327d28518c4dc0bb7 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 213 6.4E-18 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 N288_03265 48e43928c33b713327d28518c4dc0bb7 269 SMART SM01232 129 221 5.3E-28 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 N288_03265 48e43928c33b713327d28518c4dc0bb7 269 SUPERFAMILY SSF57716 226 268 2.04E-12 T 12-10-2018 N288_03265 48e43928c33b713327d28518c4dc0bb7 269 SMART SM00898 2 115 7.1E-27 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 N288_03265 48e43928c33b713327d28518c4dc0bb7 269 SUPERFAMILY SSF81624 2 138 4.84E-28 T 12-10-2018 IPR035937 MutM-like, N-terminal N288_03265 48e43928c33b713327d28518c4dc0bb7 269 Gene3D G3DSA:3.20.190.10 2 129 5.4E-28 T 12-10-2018 IPR035937 MutM-like, N-terminal N288_03265 48e43928c33b713327d28518c4dc0bb7 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 268 5.7E-7 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 N288_03265 48e43928c33b713327d28518c4dc0bb7 269 Gene3D G3DSA:1.10.8.50 131 269 9.5E-40 T 12-10-2018 N288_03265 48e43928c33b713327d28518c4dc0bb7 269 SUPERFAMILY SSF46946 130 218 5.89E-23 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 N288_03265 48e43928c33b713327d28518c4dc0bb7 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 110 8.1E-23 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 N288_24375 36a0d00a414f0c293bbfa1b195e02882 353 Pfam PF13407 Periplasmic binding protein domain 46 318 2.6E-65 T 12-10-2018 IPR025997 Periplasmic binding protein N288_24375 36a0d00a414f0c293bbfa1b195e02882 353 SUPERFAMILY SSF53822 44 346 1.99E-78 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_24375 36a0d00a414f0c293bbfa1b195e02882 353 Gene3D G3DSA:3.40.50.2300 148 297 3.2E-108 T 12-10-2018 N288_24375 36a0d00a414f0c293bbfa1b195e02882 353 Gene3D G3DSA:3.40.50.2300 44 320 3.2E-108 T 12-10-2018 N288_14945 09f792f5c0dd1ae814cc3f67901ad815 129 Pfam PF03788 LrgA family 20 109 1.6E-28 T 12-10-2018 IPR005538 LrgA/CidA family GO:0016021 N288_11545 91ca7fd9af9673d375aa56e9b0c9d2db 206 Pfam PF01613 Flavin reductase like domain 22 173 2.6E-26 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 N288_11545 91ca7fd9af9673d375aa56e9b0c9d2db 206 Gene3D G3DSA:2.30.110.10 1 204 9.9E-65 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 N288_11545 91ca7fd9af9673d375aa56e9b0c9d2db 206 SUPERFAMILY SSF50475 5 190 3.24E-45 T 12-10-2018 N288_11545 91ca7fd9af9673d375aa56e9b0c9d2db 206 SMART SM00903 19 175 3.1E-21 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 N288_02925 4b8de019dc9dc31e7b2d23989630b310 265 Gene3D G3DSA:3.40.190.10 41 261 7.0E-79 T 12-10-2018 N288_02925 4b8de019dc9dc31e7b2d23989630b310 265 Gene3D G3DSA:3.40.190.10 119 224 7.0E-79 T 12-10-2018 N288_02925 4b8de019dc9dc31e7b2d23989630b310 265 Pfam PF13531 Bacterial extracellular solute-binding protein 40 261 8.4E-51 T 12-10-2018 N288_02925 4b8de019dc9dc31e7b2d23989630b310 265 PIRSF PIRSF004846 1 265 4.1E-92 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 N288_02925 4b8de019dc9dc31e7b2d23989630b310 265 SUPERFAMILY SSF53850 38 261 2.37E-69 T 12-10-2018 N288_02925 4b8de019dc9dc31e7b2d23989630b310 265 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 45 260 3.3E-68 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 N288_25670 3bfcf711359380814531dc405c37531c 277 Gene3D G3DSA:1.10.3720.10 84 273 3.8E-36 T 12-10-2018 IPR035906 MetI-like superfamily N288_25670 3bfcf711359380814531dc405c37531c 277 SUPERFAMILY SSF161098 85 269 1.07E-40 T 12-10-2018 IPR035906 MetI-like superfamily N288_25670 3bfcf711359380814531dc405c37531c 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 265 4.3E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_10700 ab6fa78f4fce9e6f265fa1139c68a657 382 Pfam PF07470 Glycosyl Hydrolase Family 88 7 368 9.4E-101 T 12-10-2018 IPR010905 Glycosyl hydrolase, family 88 N288_10700 ab6fa78f4fce9e6f265fa1139c68a657 382 Gene3D G3DSA:1.50.10.10 3 370 1.0E-139 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 N288_10700 ab6fa78f4fce9e6f265fa1139c68a657 382 SUPERFAMILY SSF48208 26 372 2.23E-72 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 N288_12210 bf56220ebb699e1ddd4b122b69bd1e77 416 PIRSF PIRSF036794 14 416 1.1E-74 T 12-10-2018 IPR014622 Uncharacterised conserved protein UCP036794, erythromycin esterase-type N288_12210 bf56220ebb699e1ddd4b122b69bd1e77 416 SUPERFAMILY SSF159501 9 415 5.23E-109 T 12-10-2018 N288_12210 bf56220ebb699e1ddd4b122b69bd1e77 416 Gene3D G3DSA:1.20.1440.30 145 273 1.5E-57 T 12-10-2018 N288_12210 bf56220ebb699e1ddd4b122b69bd1e77 416 Gene3D G3DSA:3.40.1660.10 22 410 1.5E-57 T 12-10-2018 N288_12210 bf56220ebb699e1ddd4b122b69bd1e77 416 Pfam PF05139 Erythromycin esterase 64 409 1.3E-96 T 12-10-2018 IPR007815 Erythromycin esterase GO:0046677 N288_12210 bf56220ebb699e1ddd4b122b69bd1e77 416 Gene3D G3DSA:3.30.1870.10 65 144 1.5E-57 T 12-10-2018 N288_23340 602f122d247a8def0aebcc0b700a30fd 246 Pfam PF02706 Chain length determinant protein 3 93 4.5E-18 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 N288_23340 602f122d247a8def0aebcc0b700a30fd 246 Pfam PF13807 G-rich domain on putative tyrosine kinase 143 194 1.1E-8 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain N288_13115 bed258cbd9f2910b806c4e4cf3837622 402 Gene3D G3DSA:1.10.630.10 6 402 1.7E-141 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 N288_13115 bed258cbd9f2910b806c4e4cf3837622 402 Pfam PF00067 Cytochrome P450 181 371 3.0E-25 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 N288_13115 bed258cbd9f2910b806c4e4cf3837622 402 Pfam PF00067 Cytochrome P450 24 136 3.1E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 N288_13115 bed258cbd9f2910b806c4e4cf3837622 402 SUPERFAMILY SSF48264 16 401 3.54E-103 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 N288_13115 bed258cbd9f2910b806c4e4cf3837622 402 PRINTS PR00359 B-class P450 signature 91 102 1.0E-55 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 N288_13115 bed258cbd9f2910b806c4e4cf3837622 402 PRINTS PR00359 B-class P450 signature 274 285 1.0E-55 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 N288_13115 bed258cbd9f2910b806c4e4cf3837622 402 PRINTS PR00359 B-class P450 signature 320 335 1.0E-55 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 N288_13115 bed258cbd9f2910b806c4e4cf3837622 402 PRINTS PR00359 B-class P450 signature 341 350 1.0E-55 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 N288_13115 bed258cbd9f2910b806c4e4cf3837622 402 PRINTS PR00359 B-class P450 signature 154 169 1.0E-55 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 N288_13115 bed258cbd9f2910b806c4e4cf3837622 402 PRINTS PR00359 B-class P450 signature 137 153 1.0E-55 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 N288_13115 bed258cbd9f2910b806c4e4cf3837622 402 PRINTS PR00359 B-class P450 signature 193 215 1.0E-55 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 N288_13115 bed258cbd9f2910b806c4e4cf3837622 402 PRINTS PR00359 B-class P450 signature 292 319 1.0E-55 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 N288_13115 bed258cbd9f2910b806c4e4cf3837622 402 PRINTS PR00359 B-class P450 signature 350 361 1.0E-55 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 N288_13115 bed258cbd9f2910b806c4e4cf3837622 402 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 343 352 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 N288_08680 49d03045306c4039569a64089286ad71 148 Pfam PF00571 CBS domain 87 138 2.5E-4 T 12-10-2018 IPR000644 CBS domain N288_08680 49d03045306c4039569a64089286ad71 148 Gene3D G3DSA:3.10.580.10 1 148 3.4E-54 T 12-10-2018 N288_08680 49d03045306c4039569a64089286ad71 148 SUPERFAMILY SSF54631 12 140 9.43E-28 T 12-10-2018 N288_01905 9c03b16abda1f9f3011b4247e5f90421 191 SUPERFAMILY SSF88946 10 105 5.69E-25 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_01905 9c03b16abda1f9f3011b4247e5f90421 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 184 3.7E-26 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_01905 9c03b16abda1f9f3011b4247e5f90421 191 Gene3D G3DSA:1.10.10.10 126 187 1.6E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_01905 9c03b16abda1f9f3011b4247e5f90421 191 SUPERFAMILY SSF88659 119 186 3.74E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_01905 9c03b16abda1f9f3011b4247e5f90421 191 Pfam PF08281 Sigma-70, region 4 129 180 1.5E-10 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_01905 9c03b16abda1f9f3011b4247e5f90421 191 Pfam PF04542 Sigma-70 region 2 31 98 4.3E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_01905 9c03b16abda1f9f3011b4247e5f90421 191 Gene3D G3DSA:1.10.1740.10 5 125 1.9E-29 T 12-10-2018 N288_16750 d68cdb5972a8ccf9e31cc0e74cdcd584 186 SUPERFAMILY SSF102405 1 178 6.5E-61 T 12-10-2018 N288_16750 d68cdb5972a8ccf9e31cc0e74cdcd584 186 Pfam PF06908 Protein of unknown function (DUF1273) 5 172 6.9E-69 T 12-10-2018 IPR010697 Protein of unknown function DUF1273 N288_16750 d68cdb5972a8ccf9e31cc0e74cdcd584 186 Hamap MF_01575 UPF0398 protein . 1 178 34.806 T 12-10-2018 IPR010697 Protein of unknown function DUF1273 N288_16750 d68cdb5972a8ccf9e31cc0e74cdcd584 186 PIRSF PIRSF021290 1 180 1.3E-66 T 12-10-2018 IPR010697 Protein of unknown function DUF1273 N288_16750 d68cdb5972a8ccf9e31cc0e74cdcd584 186 Gene3D G3DSA:3.40.50.450 1 181 1.5E-66 T 12-10-2018 N288_18000 74d5cb196ed15d20536d8db12830a6c9 264 Pfam PF11079 Bacterial protein YqhG of unknown function 1 259 6.6E-128 T 12-10-2018 IPR024562 Uncharacterised protein family YqhG N288_18000 74d5cb196ed15d20536d8db12830a6c9 264 ProDom PD123329 YQHG BH2818 1 259 6.0E-93 T 12-10-2018 IPR024562 Uncharacterised protein family YqhG N288_23600 31960c163e3f4def6f59d244da3c6562 321 SUPERFAMILY SSF51261 57 219 3.66E-28 T 12-10-2018 IPR011055 Duplicated hybrid motif N288_23600 31960c163e3f4def6f59d244da3c6562 321 Pfam PF01551 Peptidase family M23 118 216 1.2E-23 T 12-10-2018 IPR016047 Peptidase M23 N288_23600 31960c163e3f4def6f59d244da3c6562 321 Gene3D G3DSA:2.70.70.10 75 232 6.1E-50 T 12-10-2018 IPR011055 Duplicated hybrid motif N288_18555 d6f9fc482cdfdfe0bde4731ac4985d83 274 SUPERFAMILY SSF48179 158 262 1.12E-19 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_18555 d6f9fc482cdfdfe0bde4731ac4985d83 274 SUPERFAMILY SSF51735 1 157 2.77E-29 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_18555 d6f9fc482cdfdfe0bde4731ac4985d83 274 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 261 7.7E-17 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 N288_18555 d6f9fc482cdfdfe0bde4731ac4985d83 274 Gene3D G3DSA:3.40.50.720 1 160 7.6E-36 T 12-10-2018 N288_18555 d6f9fc482cdfdfe0bde4731ac4985d83 274 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 97 1.6E-21 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal N288_18555 d6f9fc482cdfdfe0bde4731ac4985d83 274 Gene3D G3DSA:1.10.3730.10 161 262 1.1E-15 T 12-10-2018 N288_18555 d6f9fc482cdfdfe0bde4731ac4985d83 274 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 220 242 - T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 N288_18555 d6f9fc482cdfdfe0bde4731ac4985d83 274 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 266 17.017 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 N288_18555 d6f9fc482cdfdfe0bde4731ac4985d83 274 PIRSF PIRSF000193 1 266 4.9E-71 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 N288_03785 28dc443219ef50ef7cf0527422175b11 330 Pfam PF11553 Protein of unknown function (DUF3231) 168 326 1.3E-35 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_03785 28dc443219ef50ef7cf0527422175b11 330 Pfam PF11553 Protein of unknown function (DUF3231) 2 157 2.5E-58 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_03785 28dc443219ef50ef7cf0527422175b11 330 Gene3D G3DSA:1.20.1260.10 1 144 2.1E-12 T 12-10-2018 IPR012347 Ferritin-like N288_03785 28dc443219ef50ef7cf0527422175b11 330 Gene3D G3DSA:1.20.1260.10 170 315 1.0E-5 T 12-10-2018 IPR012347 Ferritin-like N288_22825 e505b2eab756a37b7aa9d7eb13ec2822 99 SUPERFAMILY SSF46785 5 86 1.13E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_22825 e505b2eab756a37b7aa9d7eb13ec2822 99 Pfam PF03551 Transcriptional regulator PadR-like family 13 76 2.3E-16 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal N288_22825 e505b2eab756a37b7aa9d7eb13ec2822 99 Gene3D G3DSA:1.10.10.10 2 94 5.4E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_05735 1665f540b1bfa709c272e4a4124e9ab9 335 SMART SM00382 50 234 6.3E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_05735 1665f540b1bfa709c272e4a4124e9ab9 335 Gene3D G3DSA:3.40.50.300 27 291 1.3E-60 T 12-10-2018 N288_05735 1665f540b1bfa709c272e4a4124e9ab9 335 Pfam PF00005 ABC transporter 42 185 1.7E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_05735 1665f540b1bfa709c272e4a4124e9ab9 335 SUPERFAMILY SSF52540 36 248 1.17E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_05755 fd8f19f624777148c3a216d52708817c 134 SUPERFAMILY SSF81324 28 127 2.75E-15 T 12-10-2018 N288_05755 fd8f19f624777148c3a216d52708817c 134 Pfam PF07885 Ion channel 44 127 4.8E-12 T 12-10-2018 IPR013099 Potassium channel domain N288_05755 fd8f19f624777148c3a216d52708817c 134 Gene3D G3DSA:1.10.287.70 27 132 3.4E-15 T 12-10-2018 N288_07735 f66e18e50ed2ea249e58491483ea1293 245 Pfam PF00149 Calcineurin-like phosphoesterase 1 196 1.7E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 N288_07735 f66e18e50ed2ea249e58491483ea1293 245 PRINTS PR00114 Serine/threonine phosphatase family signature 40 67 8.0E-6 T 12-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_07735 f66e18e50ed2ea249e58491483ea1293 245 PRINTS PR00114 Serine/threonine phosphatase family signature 2 29 8.0E-6 T 12-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_07735 f66e18e50ed2ea249e58491483ea1293 245 SUPERFAMILY SSF56300 1 224 2.48E-37 T 12-10-2018 N288_07735 f66e18e50ed2ea249e58491483ea1293 245 Gene3D G3DSA:3.60.21.10 1 242 3.3E-62 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_17490 90eb25be60d6907cf274c74460ab2328 389 SUPERFAMILY SSF47781 310 369 2.48E-7 T 12-10-2018 IPR010994 RuvA domain 2-like N288_17490 90eb25be60d6907cf274c74460ab2328 389 SUPERFAMILY SSF89550 4 245 1.96E-17 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 N288_17490 90eb25be60d6907cf274c74460ab2328 389 Gene3D G3DSA:1.10.150.20 317 369 4.1E-5 T 12-10-2018 N288_17490 90eb25be60d6907cf274c74460ab2328 389 Pfam PF13263 PHP-associated 196 243 6.7E-6 T 12-10-2018 N288_17490 90eb25be60d6907cf274c74460ab2328 389 Gene3D G3DSA:3.20.20.140 2 239 1.9E-19 T 12-10-2018 N288_00775 9e7e219815fc376b720a6cf6492fe02c 218 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 12-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00775 9e7e219815fc376b720a6cf6492fe02c 218 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 1.6E-40 T 12-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00775 9e7e219815fc376b720a6cf6492fe02c 218 SMART SM00322 59 124 1.4E-7 T 12-10-2018 IPR004087 K Homology domain GO:0003676 N288_00775 9e7e219815fc376b720a6cf6492fe02c 218 Gene3D G3DSA:3.30.300.20 17 106 8.1E-32 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta N288_00775 9e7e219815fc376b720a6cf6492fe02c 218 SUPERFAMILY SSF54814 2 105 2.88E-38 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 N288_00775 9e7e219815fc376b720a6cf6492fe02c 218 Gene3D G3DSA:3.30.1140.32 107 207 1.1E-40 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00775 9e7e219815fc376b720a6cf6492fe02c 218 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 9.6E-95 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 N288_00775 9e7e219815fc376b720a6cf6492fe02c 218 SUPERFAMILY SSF54821 107 205 2.49E-38 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00775 9e7e219815fc376b720a6cf6492fe02c 218 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 38.067 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 N288_00775 9e7e219815fc376b720a6cf6492fe02c 218 Pfam PF07650 KH domain 37 108 4.5E-20 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_19680 122910d89e8cf05e2dfe0abfc6c53f99 310 Gene3D G3DSA:3.10.310.30 199 310 1.1E-34 T 12-10-2018 N288_19680 122910d89e8cf05e2dfe0abfc6c53f99 310 Pfam PF02272 DHHA1 domain 178 308 3.2E-13 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 N288_19680 122910d89e8cf05e2dfe0abfc6c53f99 310 SUPERFAMILY SSF64182 12 304 1.7E-69 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily N288_19680 122910d89e8cf05e2dfe0abfc6c53f99 310 Gene3D G3DSA:3.90.1640.10 1 197 1.7E-58 T 12-10-2018 N288_19680 122910d89e8cf05e2dfe0abfc6c53f99 310 Pfam PF01368 DHH family 15 153 1.0E-11 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 N288_21970 f893e503f4588f7a7ab017b2d8b1f683 176 Pfam PF02417 Chromate transporter 5 171 1.1E-36 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 N288_17875 c1d6c8e8146a16c95d20c15dc4d9b553 77 Pfam PF06686 Stage III sporulation protein AC/AD protein family 19 74 2.7E-19 T 12-10-2018 IPR025664 Stage III sporulation protein AC/AD family N288_17875 c1d6c8e8146a16c95d20c15dc4d9b553 77 TIGRFAM TIGR02849 spore_III_AD: stage III sporulation protein AD 1 75 1.5E-28 T 12-10-2018 IPR014211 Stage III sporulation protein AD N288_09330 c632c36efd27be6e17faf498b57d0a31 428 ProSitePatterns PS00483 Dihydroorotase signature 2. 302 313 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09330 c632c36efd27be6e17faf498b57d0a31 428 ProSitePatterns PS00482 Dihydroorotase signature 1. 57 65 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09330 c632c36efd27be6e17faf498b57d0a31 428 SUPERFAMILY SSF51338 1 424 5.17E-29 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_09330 c632c36efd27be6e17faf498b57d0a31 428 Pfam PF01979 Amidohydrolase family 51 420 6.0E-54 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 N288_09330 c632c36efd27be6e17faf498b57d0a31 428 Gene3D G3DSA:2.30.40.10 7 419 2.7E-157 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_09330 c632c36efd27be6e17faf498b57d0a31 428 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 16 422 1.2E-149 T 12-10-2018 N288_09330 c632c36efd27be6e17faf498b57d0a31 428 Gene3D G3DSA:3.20.20.140 54 366 2.7E-157 T 12-10-2018 N288_09330 c632c36efd27be6e17faf498b57d0a31 428 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 423 45.126 T 12-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09330 c632c36efd27be6e17faf498b57d0a31 428 SUPERFAMILY SSF51556 54 368 1.21E-110 T 12-10-2018 IPR032466 Metal-dependent hydrolase N288_23815 59ee3e8cbf6573cb9d5d6beac12dd861 346 Gene3D G3DSA:3.90.870.10 3 219 1.1E-84 T 12-10-2018 N288_23815 59ee3e8cbf6573cb9d5d6beac12dd861 346 Pfam PF03481 Putative GTP-binding controlling metal-binding 205 341 7.0E-28 T 12-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain N288_23815 59ee3e8cbf6573cb9d5d6beac12dd861 346 SUPERFAMILY SSF55821 19 216 3.66E-67 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily N288_23815 59ee3e8cbf6573cb9d5d6beac12dd861 346 PIRSF PIRSF004930 1 346 7.8E-134 T 12-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 N288_23815 59ee3e8cbf6573cb9d5d6beac12dd861 346 Pfam PF01300 Telomere recombination 27 203 5.8E-59 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 N288_23815 59ee3e8cbf6573cb9d5d6beac12dd861 346 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 19 213 2.6E-65 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 N288_23815 59ee3e8cbf6573cb9d5d6beac12dd861 346 Gene3D G3DSA:3.40.50.11030 222 346 4.3E-41 T 12-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily N288_11015 e53e1470fbfbebc30cd6fd8900eb7ed2 656 Pfam PF00884 Sulfatase 254 543 2.5E-42 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 N288_11015 e53e1470fbfbebc30cd6fd8900eb7ed2 656 PIRSF PIRSF005091 1 627 2.9E-189 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like N288_11015 e53e1470fbfbebc30cd6fd8900eb7ed2 656 SUPERFAMILY SSF53649 251 641 2.06E-77 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 N288_11015 e53e1470fbfbebc30cd6fd8900eb7ed2 656 Gene3D G3DSA:3.40.720.10 245 553 6.0E-80 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 N288_18090 7db622ebed18856db3bd837b0dedde9e 57 ProDom PD052097 RELATED ALKALIPHILY YQGW MEMBRANE TRANSMEMBRANE SPANNING 1 57 3.0E-12 T 12-10-2018 IPR024490 Protein of unknown function DUF2759 N288_18090 7db622ebed18856db3bd837b0dedde9e 57 Pfam PF10958 Protein of unknown function (DUF2759) 6 55 8.1E-25 T 12-10-2018 IPR024490 Protein of unknown function DUF2759 N288_16560 706901730e926295fdafec0928ce8851 325 SUPERFAMILY SSF109604 101 261 5.16E-32 T 12-10-2018 N288_16560 706901730e926295fdafec0928ce8851 325 SMART SM00471 106 242 1.1E-7 T 12-10-2018 IPR003607 HD/PDEase domain N288_16560 706901730e926295fdafec0928ce8851 325 Pfam PF01966 HD domain 112 233 1.8E-18 T 12-10-2018 IPR006674 HD domain N288_16560 706901730e926295fdafec0928ce8851 325 Gene3D G3DSA:1.10.3210.10 48 272 2.9E-60 T 12-10-2018 N288_11500 3d4d11ccdb0fb704358e47eb99e5676f 264 SMART SM00382 31 235 3.4E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_11500 3d4d11ccdb0fb704358e47eb99e5676f 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_11500 3d4d11ccdb0fb704358e47eb99e5676f 264 Pfam PF00005 ABC transporter 22 177 4.3E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_11500 3d4d11ccdb0fb704358e47eb99e5676f 264 SUPERFAMILY SSF52540 2 230 2.55E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_11500 3d4d11ccdb0fb704358e47eb99e5676f 264 Gene3D G3DSA:3.40.50.300 1 260 1.8E-59 T 12-10-2018 N288_22740 44087f24e3965d231dd0d75b6210bb2a 181 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 179 1.2E-84 T 12-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 N288_22740 44087f24e3965d231dd0d75b6210bb2a 181 PIRSF PIRSF038321 1 181 8.1E-91 T 12-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 N288_22740 44087f24e3965d231dd0d75b6210bb2a 181 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 4 170 2.6E-78 T 12-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 N288_06975 6c2f343a99699216fa1d1f42b805cb0c 345 PIRSF PIRSF037431 1 345 4.7E-99 T 12-10-2018 IPR017202 Sensor histidine kinase LiaS/VraS GO:0000155|GO:0000160|GO:0004673|GO:0016021 N288_06975 6c2f343a99699216fa1d1f42b805cb0c 345 Gene3D G3DSA:3.30.565.10 212 344 3.1E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_06975 6c2f343a99699216fa1d1f42b805cb0c 345 SUPERFAMILY SSF55874 217 341 9.69E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_06975 6c2f343a99699216fa1d1f42b805cb0c 345 Pfam PF07730 Histidine kinase 147 213 7.7E-21 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 N288_06975 6c2f343a99699216fa1d1f42b805cb0c 345 SMART SM00387 250 343 6.4E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_06975 6c2f343a99699216fa1d1f42b805cb0c 345 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 252 342 3.6E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_00710 47783ffd50f542eccb4daefc1be10a01 1199 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 331 2.6E-88 T 12-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00710 47783ffd50f542eccb4daefc1be10a01 1199 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 663 8.8E-35 T 12-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00710 47783ffd50f542eccb4daefc1be10a01 1199 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1191 18.704 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00710 47783ffd50f542eccb4daefc1be10a01 1199 Pfam PF04998 RNA polymerase Rpb1, domain 5 770 989 5.3E-53 T 12-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00710 47783ffd50f542eccb4daefc1be10a01 1199 SMART SM00663 224 503 9.3E-187 T 12-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00710 47783ffd50f542eccb4daefc1be10a01 1199 Gene3D G3DSA:1.10.40.90 363 405 5.3E-24 T 12-10-2018 N288_00710 47783ffd50f542eccb4daefc1be10a01 1199 Gene3D G3DSA:1.10.132.30 660 794 3.3E-60 T 12-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00710 47783ffd50f542eccb4daefc1be10a01 1199 Pfam PF04998 RNA polymerase Rpb1, domain 5 1004 1129 1.0E-14 T 12-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00710 47783ffd50f542eccb4daefc1be10a01 1199 Gene3D G3DSA:1.10.274.100 479 659 8.7E-48 T 12-10-2018 N288_00710 47783ffd50f542eccb4daefc1be10a01 1199 SUPERFAMILY SSF64484 5 1183 0.0 T 12-10-2018 N288_00710 47783ffd50f542eccb4daefc1be10a01 1199 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1181 0.0 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00710 47783ffd50f542eccb4daefc1be10a01 1199 Gene3D G3DSA:1.10.150.390 1130 1190 9.3E-29 T 12-10-2018 N288_00710 47783ffd50f542eccb4daefc1be10a01 1199 Pfam PF05000 RNA polymerase Rpb1, domain 4 692 759 6.5E-15 T 12-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00710 47783ffd50f542eccb4daefc1be10a01 1199 Gene3D G3DSA:1.10.1790.20 950 1128 1.5E-65 T 12-10-2018 N288_00710 47783ffd50f542eccb4daefc1be10a01 1199 Gene3D G3DSA:2.40.50.100 966 1029 1.5E-65 T 12-10-2018 N288_00710 47783ffd50f542eccb4daefc1be10a01 1199 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 384 2.3E-9 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_00710 47783ffd50f542eccb4daefc1be10a01 1199 Pfam PF00623 RNA polymerase Rpb1, domain 2 378 474 1.1E-29 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_22095 a936f5801fca6d61b70b0bfba6beca67 309 Gene3D G3DSA:3.10.310.20 190 309 2.6E-35 T 12-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 N288_22095 a936f5801fca6d61b70b0bfba6beca67 309 Pfam PF01368 DHH family 3 146 1.7E-30 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 N288_22095 a936f5801fca6d61b70b0bfba6beca67 309 Hamap MF_00207 Probable manganese-dependent inorganic pyrophosphatase [ppaC]. 3 309 44.868 T 12-10-2018 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable GO:0004427 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 N288_22095 a936f5801fca6d61b70b0bfba6beca67 309 Pfam PF02833 DHHA2 domain 183 306 5.0E-18 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 N288_22095 a936f5801fca6d61b70b0bfba6beca67 309 Gene3D G3DSA:3.90.1640.10 1 188 6.3E-79 T 12-10-2018 N288_22095 a936f5801fca6d61b70b0bfba6beca67 309 SUPERFAMILY SSF64182 1 307 1.29E-81 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily N288_22095 a936f5801fca6d61b70b0bfba6beca67 309 SMART SM01131 181 307 1.4E-48 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 N288_01150 75a5ff8103ebc6ec18b377b310e9b707 498 Gene3D G3DSA:1.20.1530.20 7 394 8.5E-27 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily N288_01150 75a5ff8103ebc6ec18b377b310e9b707 498 Gene3D G3DSA:3.30.70.1450 398 487 9.9E-19 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 N288_01150 75a5ff8103ebc6ec18b377b310e9b707 498 Pfam PF00999 Sodium/hydrogen exchanger family 11 389 6.8E-56 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 N288_01150 75a5ff8103ebc6ec18b377b310e9b707 498 Pfam PF02080 TrkA-C domain 418 485 5.6E-13 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 N288_01150 75a5ff8103ebc6ec18b377b310e9b707 498 SUPERFAMILY SSF116726 410 484 1.18E-14 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 N288_22785 8e33fb92186d8d95e9c34e14bcffeddc 640 Gene3D G3DSA:1.10.1790.10 291 391 4.5E-21 T 12-10-2018 N288_22785 8e33fb92186d8d95e9c34e14bcffeddc 640 SUPERFAMILY SSF63520 292 392 6.28E-21 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 N288_22785 8e33fb92186d8d95e9c34e14bcffeddc 640 SUPERFAMILY SSF55804 499 639 1.27E-28 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 N288_22785 8e33fb92186d8d95e9c34e14bcffeddc 640 Pfam PF00874 PRD domain 301 388 6.1E-20 T 12-10-2018 IPR011608 PRD domain GO:0006355 N288_22785 8e33fb92186d8d95e9c34e14bcffeddc 640 Pfam PF00874 PRD domain 191 278 1.2E-11 T 12-10-2018 IPR011608 PRD domain GO:0006355 N288_22785 8e33fb92186d8d95e9c34e14bcffeddc 640 Gene3D G3DSA:1.10.1790.10 183 282 3.7E-11 T 12-10-2018 N288_22785 8e33fb92186d8d95e9c34e14bcffeddc 640 Gene3D G3DSA:3.40.50.2300 401 488 2.1E-10 T 12-10-2018 N288_22785 8e33fb92186d8d95e9c34e14bcffeddc 640 SUPERFAMILY SSF63520 182 280 2.75E-15 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 N288_22785 8e33fb92186d8d95e9c34e14bcffeddc 640 SUPERFAMILY SSF52794 401 479 4.6E-6 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 N288_22785 8e33fb92186d8d95e9c34e14bcffeddc 640 Gene3D G3DSA:1.10.10.10 1 149 1.2E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_22785 8e33fb92186d8d95e9c34e14bcffeddc 640 Pfam PF08279 HTH domain 4 62 5.1E-5 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 N288_22785 8e33fb92186d8d95e9c34e14bcffeddc 640 Gene3D G3DSA:3.40.930.10 499 640 3.7E-26 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 N288_22785 8e33fb92186d8d95e9c34e14bcffeddc 640 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 502 639 1.8E-25 T 12-10-2018 IPR002178 PTS EIIA type-2 domain N288_21880 d940e96170823e8d5cc4677412136753 397 SUPERFAMILY SSF50156 305 388 8.41E-14 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 N288_21880 d940e96170823e8d5cc4677412136753 397 Gene3D G3DSA:2.30.42.10 278 379 4.0E-11 T 12-10-2018 N288_21880 d940e96170823e8d5cc4677412136753 397 Pfam PF13180 PDZ domain 303 350 2.2E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 N288_04045 3fcf95256dbad455547f624ef8fe888d 416 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 78 90 - T 12-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 N288_04045 3fcf95256dbad455547f624ef8fe888d 416 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 7 397 2.8E-74 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 N288_04045 3fcf95256dbad455547f624ef8fe888d 416 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 169 182 4.8E-14 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 N288_04045 3fcf95256dbad455547f624ef8fe888d 416 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 120 134 4.8E-14 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 N288_04045 3fcf95256dbad455547f624ef8fe888d 416 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 6 22 4.8E-14 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 N288_04045 3fcf95256dbad455547f624ef8fe888d 416 Pfam PF00145 C-5 cytosine-specific DNA methylase 6 399 3.8E-76 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 N288_04045 3fcf95256dbad455547f624ef8fe888d 416 SUPERFAMILY SSF53335 4 399 4.82E-70 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_04045 3fcf95256dbad455547f624ef8fe888d 416 Gene3D G3DSA:3.40.50.150 1 226 2.2E-57 T 12-10-2018 N288_05950 6400bab4b6cac68f59e0cc21e6b4c918 157 PIRSF PIRSF029256 2 157 6.0E-67 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 N288_05950 6400bab4b6cac68f59e0cc21e6b4c918 157 Gene3D G3DSA:3.40.1280.10 1 157 3.2E-67 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal N288_05950 6400bab4b6cac68f59e0cc21e6b4c918 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 2 156 4.4E-65 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 N288_05950 6400bab4b6cac68f59e0cc21e6b4c918 157 Pfam PF00588 SpoU rRNA Methylase family 3 145 6.9E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 N288_05950 6400bab4b6cac68f59e0cc21e6b4c918 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 154 34.923 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 N288_05950 6400bab4b6cac68f59e0cc21e6b4c918 157 SUPERFAMILY SSF75217 3 155 1.31E-43 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases N288_06055 078e531f7d06fdbb661f8303b00ea538 348 SUPERFAMILY SSF48371 113 323 9.72E-13 T 12-10-2018 IPR016024 Armadillo-type fold N288_06055 078e531f7d06fdbb661f8303b00ea538 348 Pfam PF13646 HEAT repeats 239 312 6.5E-8 T 12-10-2018 N288_06055 078e531f7d06fdbb661f8303b00ea538 348 Gene3D G3DSA:1.25.10.10 226 346 8.4E-11 T 12-10-2018 IPR011989 Armadillo-like helical N288_01145 6a5341ea1b7f4b207a7c4a7b674ad8f7 407 Pfam PF00375 Sodium:dicarboxylate symporter family 3 396 2.0E-139 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 N288_01145 6a5341ea1b7f4b207a7c4a7b674ad8f7 407 Gene3D G3DSA:1.10.3860.10 1 403 3.2E-145 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 N288_01145 6a5341ea1b7f4b207a7c4a7b674ad8f7 407 SUPERFAMILY SSF118215 3 398 2.88E-128 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 N288_01145 6a5341ea1b7f4b207a7c4a7b674ad8f7 407 PRINTS PR00173 Glutamate-aspartate symporter signature 47 67 1.0E-52 T 12-10-2018 N288_01145 6a5341ea1b7f4b207a7c4a7b674ad8f7 407 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 1.0E-52 T 12-10-2018 N288_01145 6a5341ea1b7f4b207a7c4a7b674ad8f7 407 PRINTS PR00173 Glutamate-aspartate symporter signature 188 207 1.0E-52 T 12-10-2018 N288_01145 6a5341ea1b7f4b207a7c4a7b674ad8f7 407 PRINTS PR00173 Glutamate-aspartate symporter signature 77 102 1.0E-52 T 12-10-2018 N288_01145 6a5341ea1b7f4b207a7c4a7b674ad8f7 407 PRINTS PR00173 Glutamate-aspartate symporter signature 223 242 1.0E-52 T 12-10-2018 N288_01145 6a5341ea1b7f4b207a7c4a7b674ad8f7 407 PRINTS PR00173 Glutamate-aspartate symporter signature 352 372 1.0E-52 T 12-10-2018 N288_01145 6a5341ea1b7f4b207a7c4a7b674ad8f7 407 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 1.0E-52 T 12-10-2018 N288_01145 6a5341ea1b7f4b207a7c4a7b674ad8f7 407 PRINTS PR00173 Glutamate-aspartate symporter signature 1 21 1.0E-52 T 12-10-2018 N288_01070 931c26fc7e048d61025f7c446550a97b 70 Pfam PF01381 Helix-turn-helix 15 65 2.9E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_01070 931c26fc7e048d61025f7c446550a97b 70 SMART SM00530 9 65 4.7E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_01070 931c26fc7e048d61025f7c446550a97b 70 SUPERFAMILY SSF47413 6 69 5.09E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_01070 931c26fc7e048d61025f7c446550a97b 70 Gene3D G3DSA:1.10.260.40 5 70 4.2E-22 T 12-10-2018 N288_17200 706ae3e00d93e1b1464b78756503ebb4 210 Pfam PF00571 CBS domain 4 53 9.7E-7 T 12-10-2018 IPR000644 CBS domain N288_17200 706ae3e00d93e1b1464b78756503ebb4 210 PIRSF PIRSF035040 1 210 6.3E-39 T 12-10-2018 IPR017036 Uncharacterised conserved protein UCP035040, CBS-type N288_17200 706ae3e00d93e1b1464b78756503ebb4 210 SUPERFAMILY SSF54631 1 123 9.32E-21 T 12-10-2018 N288_17200 706ae3e00d93e1b1464b78756503ebb4 210 Gene3D G3DSA:3.10.580.10 1 137 2.4E-23 T 12-10-2018 N288_09395 41bde34f1c25bdbf6fdcd71c7ddabb52 73 Gene3D G3DSA:3.90.940.10 1 73 3.6E-18 T 12-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 N288_09395 41bde34f1c25bdbf6fdcd71c7ddabb52 73 SMART SM01409 8 61 4.4E-13 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 N288_09395 41bde34f1c25bdbf6fdcd71c7ddabb52 73 SUPERFAMILY SSF63562 1 67 4.36E-22 T 12-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 N288_09395 41bde34f1c25bdbf6fdcd71c7ddabb52 73 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 14.085 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_09395 41bde34f1c25bdbf6fdcd71c7ddabb52 73 Pfam PF01192 RNA polymerase Rpb6 9 60 3.5E-13 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 N288_09395 41bde34f1c25bdbf6fdcd71c7ddabb52 73 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.5E-21 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 N288_21290 e97aeeb9224db0f4cc6baca404b29e52 259 Gene3D G3DSA:3.30.428.10 27 131 1.5E-10 T 12-10-2018 IPR036265 HIT-like superfamily N288_21290 e97aeeb9224db0f4cc6baca404b29e52 259 Pfam PF16285 Domain of unknown function (DUF4931) 8 252 8.4E-126 T 12-10-2018 N288_21290 e97aeeb9224db0f4cc6baca404b29e52 259 PIRSF PIRSF031505 1 254 1.6E-96 T 12-10-2018 IPR012361 Galactose-1-phosphate uridylyltransferase, short form, putative N288_21290 e97aeeb9224db0f4cc6baca404b29e52 259 SUPERFAMILY SSF54197 13 130 9.45E-24 T 12-10-2018 IPR036265 HIT-like superfamily N288_25105 243e37da38f47b473bfe55c4d662929d 251 Gene3D G3DSA:3.40.50.720 5 250 4.3E-63 T 12-10-2018 N288_25105 243e37da38f47b473bfe55c4d662929d 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_25105 243e37da38f47b473bfe55c4d662929d 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 248 1.5E-46 T 12-10-2018 N288_25105 243e37da38f47b473bfe55c4d662929d 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.3E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_25105 243e37da38f47b473bfe55c4d662929d 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 1.3E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_25105 243e37da38f47b473bfe55c4d662929d 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.3E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_25105 243e37da38f47b473bfe55c4d662929d 251 SUPERFAMILY SSF51735 6 249 3.97E-68 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_25105 243e37da38f47b473bfe55c4d662929d 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.6E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_25105 243e37da38f47b473bfe55c4d662929d 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.6E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_25105 243e37da38f47b473bfe55c4d662929d 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.6E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_25105 243e37da38f47b473bfe55c4d662929d 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.6E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_25105 243e37da38f47b473bfe55c4d662929d 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.6E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_25105 243e37da38f47b473bfe55c4d662929d 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.6E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_03340 822b0e6f509a7d8a24d3cce6ced677f7 88 PIRSF PIRSF010606 1 88 1.3E-37 T 12-10-2018 IPR016571 Spore coat assembly protein CotJB N288_03340 822b0e6f509a7d8a24d3cce6ced677f7 88 Pfam PF12652 CotJB protein 11 87 9.0E-31 T 12-10-2018 IPR024207 Spore coat assembly protein CotJB, domain N288_12030 b716b91341ef456c77995be7958263a1 494 Gene3D G3DSA:3.40.710.10 283 493 6.8E-52 T 12-10-2018 N288_12030 b716b91341ef456c77995be7958263a1 494 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 67 472 6.1E-128 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 N288_12030 b716b91341ef456c77995be7958263a1 494 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 39 492 1.8E-139 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 N288_12030 b716b91341ef456c77995be7958263a1 494 SUPERFAMILY SSF56601 41 482 2.04E-93 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_12030 b716b91341ef456c77995be7958263a1 494 Gene3D G3DSA:3.50.80.20 103 174 1.3E-22 T 12-10-2018 N288_12030 b716b91341ef456c77995be7958263a1 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 79 98 2.6E-28 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 N288_12030 b716b91341ef456c77995be7958263a1 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 310 332 2.6E-28 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 N288_12030 b716b91341ef456c77995be7958263a1 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 382 396 2.6E-28 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 N288_12030 b716b91341ef456c77995be7958263a1 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 449 462 2.6E-28 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 N288_12030 b716b91341ef456c77995be7958263a1 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 367 381 2.6E-28 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 N288_09945 980b4da4c59c01e705be0d8feeb43efe 748 Gene3D G3DSA:3.40.50.10050 544 651 2.0E-39 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily N288_09945 980b4da4c59c01e705be0d8feeb43efe 748 SUPERFAMILY SSF50447 422 505 3.93E-27 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily N288_09945 980b4da4c59c01e705be0d8feeb43efe 748 Pfam PF11987 Translation-initiation factor 2 536 640 3.6E-37 T 12-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 N288_09945 980b4da4c59c01e705be0d8feeb43efe 748 ProSitePatterns PS01176 Initiation factor 2 signature. 701 723 - T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 N288_09945 980b4da4c59c01e705be0d8feeb43efe 748 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 167 748 4.2E-280 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 N288_09945 980b4da4c59c01e705be0d8feeb43efe 748 Gene3D G3DSA:2.40.30.10 652 748 5.5E-35 T 12-10-2018 N288_09945 980b4da4c59c01e705be0d8feeb43efe 748 SUPERFAMILY SSF50447 651 747 2.7E-33 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily N288_09945 980b4da4c59c01e705be0d8feeb43efe 748 Pfam PF00009 Elongation factor Tu GTP binding domain 255 410 1.5E-36 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 N288_09945 980b4da4c59c01e705be0d8feeb43efe 748 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 748 17.599 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 N288_09945 980b4da4c59c01e705be0d8feeb43efe 748 SUPERFAMILY SSF52540 244 422 3.4E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_09945 980b4da4c59c01e705be0d8feeb43efe 748 SUPERFAMILY SSF52156 528 657 3.27E-39 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily N288_09945 980b4da4c59c01e705be0d8feeb43efe 748 Gene3D G3DSA:1.10.10.2480 1 65 3.7E-16 T 12-10-2018 N288_09945 980b4da4c59c01e705be0d8feeb43efe 748 Gene3D G3DSA:2.40.30.10 422 539 2.0E-42 T 12-10-2018 N288_09945 980b4da4c59c01e705be0d8feeb43efe 748 Gene3D G3DSA:3.40.50.300 247 421 1.3E-73 T 12-10-2018 N288_09945 980b4da4c59c01e705be0d8feeb43efe 748 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 253 409 2.2E-40 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 N288_09945 980b4da4c59c01e705be0d8feeb43efe 748 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 175 224 1.9E-15 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal N288_09945 980b4da4c59c01e705be0d8feeb43efe 748 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 53 2.6E-15 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal N288_18960 f95f4c8ed8312bcf23149efe470d6a45 385 Gene3D G3DSA:3.40.640.10 13 254 9.1E-105 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_18960 f95f4c8ed8312bcf23149efe470d6a45 385 PIRSF PIRSF005572 1 381 1.6E-102 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 N288_18960 f95f4c8ed8312bcf23149efe470d6a45 385 Gene3D G3DSA:3.90.1150.10 3 364 9.1E-105 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_18960 f95f4c8ed8312bcf23149efe470d6a45 385 Pfam PF00266 Aminotransferase class-V 3 366 5.0E-60 T 12-10-2018 IPR000192 Aminotransferase class V domain N288_18960 f95f4c8ed8312bcf23149efe470d6a45 385 SUPERFAMILY SSF53383 2 375 2.5E-84 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_25280 5fe57c0fc9d15f6d9da480e8d01b17c4 567 Pfam PF00672 HAMP domain 212 258 1.2E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_25280 5fe57c0fc9d15f6d9da480e8d01b17c4 567 Pfam PF17202 Single cache domain 3 83 184 1.5E-32 T 12-10-2018 IPR033463 Single cache domain 3 N288_25280 5fe57c0fc9d15f6d9da480e8d01b17c4 567 SUPERFAMILY SSF103190 71 185 3.66E-10 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily N288_25280 5fe57c0fc9d15f6d9da480e8d01b17c4 567 SMART SM00304 210 262 4.8E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_25280 5fe57c0fc9d15f6d9da480e8d01b17c4 567 Gene3D G3DSA:1.20.1480.50 173 262 2.4E-10 T 12-10-2018 N288_25280 5fe57c0fc9d15f6d9da480e8d01b17c4 567 SUPERFAMILY SSF58104 231 566 1.7E-73 T 12-10-2018 N288_25280 5fe57c0fc9d15f6d9da480e8d01b17c4 567 Gene3D G3DSA:1.10.287.950 263 566 1.0E-71 T 12-10-2018 N288_25280 5fe57c0fc9d15f6d9da480e8d01b17c4 567 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 517 1.3E-50 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_25280 5fe57c0fc9d15f6d9da480e8d01b17c4 567 SMART SM00283 291 566 8.8E-83 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_08240 fcbe457b9d39603217dfe79d89f5857a 561 SUPERFAMILY SSF51445 3 477 1.16E-159 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_08240 fcbe457b9d39603217dfe79d89f5857a 561 Pfam PF00128 Alpha amylase, catalytic domain 28 376 2.8E-131 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_08240 fcbe457b9d39603217dfe79d89f5857a 561 SMART SM00642 13 419 1.3E-164 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_08240 fcbe457b9d39603217dfe79d89f5857a 561 SUPERFAMILY SSF51011 480 559 3.74E-18 T 12-10-2018 N288_08240 fcbe457b9d39603217dfe79d89f5857a 561 Gene3D G3DSA:3.90.400.10 105 175 4.9E-202 T 12-10-2018 N288_08240 fcbe457b9d39603217dfe79d89f5857a 561 Gene3D G3DSA:3.20.20.80 5 472 4.9E-202 T 12-10-2018 N288_08240 fcbe457b9d39603217dfe79d89f5857a 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 554 6.6E-8 T 12-10-2018 IPR032091 Maltogenic Amylase, C-terminal N288_08240 fcbe457b9d39603217dfe79d89f5857a 561 Gene3D G3DSA:2.60.40.1180 481 561 2.4E-23 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_08240 fcbe457b9d39603217dfe79d89f5857a 561 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 5 558 1.6E-269 T 12-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 N288_10225 0bd5e361aced505e39504bac8bc2b266 228 Gene3D G3DSA:3.40.50.1000 15 215 1.3E-34 T 12-10-2018 IPR023214 HAD superfamily N288_10225 0bd5e361aced505e39504bac8bc2b266 228 SUPERFAMILY SSF56784 16 215 2.86E-35 T 12-10-2018 IPR036412 HAD-like superfamily N288_10225 0bd5e361aced505e39504bac8bc2b266 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 20 201 6.5E-21 T 12-10-2018 N288_10225 0bd5e361aced505e39504bac8bc2b266 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 100 196 4.0E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_10225 0bd5e361aced505e39504bac8bc2b266 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 165 2.2E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_10225 0bd5e361aced505e39504bac8bc2b266 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 167 187 2.2E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_10225 0bd5e361aced505e39504bac8bc2b266 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 119 132 2.2E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_10225 0bd5e361aced505e39504bac8bc2b266 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 16 27 2.2E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_10225 0bd5e361aced505e39504bac8bc2b266 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 71 203 2.9E-15 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_23135 7f2fef33ddb5335975ac7b4f7d263e1d 214 Pfam PF06054 Competence protein CoiA-like family 20 171 7.5E-32 T 12-10-2018 IPR010330 Competence-induced protein CoiA-like N288_17655 2c790e2ac62603aa615867e9e5d11c4c 516 SUPERFAMILY SSF52096 3 257 1.33E-80 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_17655 2c790e2ac62603aa615867e9e5d11c4c 516 Pfam PF01039 Carboxyl transferase domain 29 514 2.6E-194 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 N288_17655 2c790e2ac62603aa615867e9e5d11c4c 516 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 96 110 8.7E-5 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_17655 2c790e2ac62603aa615867e9e5d11c4c 516 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 195 206 8.7E-5 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_17655 2c790e2ac62603aa615867e9e5d11c4c 516 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 130 148 8.7E-5 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_17655 2c790e2ac62603aa615867e9e5d11c4c 516 Gene3D G3DSA:3.90.226.10 1 259 2.7E-97 T 12-10-2018 N288_17655 2c790e2ac62603aa615867e9e5d11c4c 516 Gene3D G3DSA:3.90.226.10 260 516 6.7E-92 T 12-10-2018 N288_17655 2c790e2ac62603aa615867e9e5d11c4c 516 SUPERFAMILY SSF52096 244 516 2.6E-90 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_13320 45b6384fc9b003c2d3b42cc670534e77 309 Gene3D G3DSA:3.40.50.300 16 181 5.5E-44 T 12-10-2018 N288_13320 45b6384fc9b003c2d3b42cc670534e77 309 SUPERFAMILY SSF52540 7 283 8.5E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_13320 45b6384fc9b003c2d3b42cc670534e77 309 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 165 2.9E-64 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 N288_13320 45b6384fc9b003c2d3b42cc670534e77 309 Gene3D G3DSA:1.10.8.300 197 305 1.8E-31 T 12-10-2018 N288_13320 45b6384fc9b003c2d3b42cc670534e77 309 PIRSF PIRSF002849 1 309 1.7E-123 T 12-10-2018 N288_13320 45b6384fc9b003c2d3b42cc670534e77 309 SMART SM00382 32 173 3.4E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_07750 cfd6f42da0044a5a1758104422d5cee9 257 Gene3D G3DSA:3.40.50.720 1 256 1.1E-61 T 12-10-2018 N288_07750 cfd6f42da0044a5a1758104422d5cee9 257 SUPERFAMILY SSF51735 7 256 3.67E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_07750 cfd6f42da0044a5a1758104422d5cee9 257 PIRSF PIRSF000094 2 257 2.4E-104 T 12-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 N288_07750 cfd6f42da0044a5a1758104422d5cee9 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 254 1.9E-87 T 12-10-2018 N288_07750 cfd6f42da0044a5a1758104422d5cee9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07750 cfd6f42da0044a5a1758104422d5cee9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07750 cfd6f42da0044a5a1758104422d5cee9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07750 cfd6f42da0044a5a1758104422d5cee9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_14410 e0aac25ff437d0393d437771e2111ec6 167 Pfam PF10002 Predicted membrane protein (DUF2243) 22 149 2.2E-46 T 12-10-2018 IPR018719 Protein of unknown function DUF2243, membrane N288_16540 573413db8ef45ffa0fb1a911e9059571 249 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_16540 573413db8ef45ffa0fb1a911e9059571 249 SUPERFAMILY SSF52540 4 224 3.0E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_16540 573413db8ef45ffa0fb1a911e9059571 249 Pfam PF00005 ABC transporter 19 164 1.8E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_16540 573413db8ef45ffa0fb1a911e9059571 249 Gene3D G3DSA:3.40.50.300 2 245 2.5E-66 T 12-10-2018 N288_16540 573413db8ef45ffa0fb1a911e9059571 249 SMART SM00382 28 229 4.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_01215 89acb368355bc8909892eded1c5740f9 184 Gene3D G3DSA:3.40.630.30 2 183 2.7E-45 T 12-10-2018 N288_01215 89acb368355bc8909892eded1c5740f9 184 Pfam PF13302 Acetyltransferase (GNAT) domain 11 148 4.6E-17 T 12-10-2018 IPR000182 GNAT domain N288_01215 89acb368355bc8909892eded1c5740f9 184 SUPERFAMILY SSF55729 5 173 5.59E-41 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_08980 35e923220ba3135b8235825c62764ba1 155 Pfam PF04238 Protein of unknown function (DUF420) 8 136 7.1E-41 T 12-10-2018 IPR007352 Protein of unknown function DUF420 N288_08980 35e923220ba3135b8235825c62764ba1 155 Gene3D G3DSA:1.20.120.80 2 140 1.6E-7 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_04385 13f14c68f483103a304609b63418a9a4 428 SUPERFAMILY SSF51905 1 419 5.96E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_04385 13f14c68f483103a304609b63418a9a4 428 Gene3D G3DSA:3.90.660.50 85 367 8.1E-35 T 12-10-2018 N288_04385 13f14c68f483103a304609b63418a9a4 428 Gene3D G3DSA:3.50.50.60 9 396 8.1E-35 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_04385 13f14c68f483103a304609b63418a9a4 428 Pfam PF01593 Flavin containing amine oxidoreductase 15 266 4.8E-12 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 N288_07335 27e6ea252f06ab42921cdd9eb1e804c6 510 ProSitePatterns PS00982 Bacterial-type phytoene dehydrogenase signature. 459 479 - T 12-10-2018 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site N288_07335 27e6ea252f06ab42921cdd9eb1e804c6 510 PRINTS PR00419 Adrenodoxin reductase family signature 27 40 1.3E-7 T 12-10-2018 N288_07335 27e6ea252f06ab42921cdd9eb1e804c6 510 PRINTS PR00419 Adrenodoxin reductase family signature 4 26 1.3E-7 T 12-10-2018 N288_07335 27e6ea252f06ab42921cdd9eb1e804c6 510 SUPERFAMILY SSF51905 2 489 7.59E-66 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_07335 27e6ea252f06ab42921cdd9eb1e804c6 510 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 5 492 3.7E-144 T 12-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 N288_07335 27e6ea252f06ab42921cdd9eb1e804c6 510 Pfam PF01593 Flavin containing amine oxidoreductase 13 487 7.0E-25 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 N288_07335 27e6ea252f06ab42921cdd9eb1e804c6 510 Gene3D G3DSA:3.50.50.60 201 323 4.4E-15 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_07335 27e6ea252f06ab42921cdd9eb1e804c6 510 Gene3D G3DSA:3.50.50.60 2 112 4.5E-24 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_17715 5a63e6cb08397840a4a9bbfe7fcf7e3c 619 SUPERFAMILY SSF51703 10 517 4.71E-113 T 12-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 N288_17715 5a63e6cb08397840a4a9bbfe7fcf7e3c 619 Pfam PF01642 Methylmalonyl-CoA mutase 39 116 3.7E-14 T 12-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 N288_17715 5a63e6cb08397840a4a9bbfe7fcf7e3c 619 Pfam PF01642 Methylmalonyl-CoA mutase 155 520 3.9E-97 T 12-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 N288_17715 5a63e6cb08397840a4a9bbfe7fcf7e3c 619 Gene3D G3DSA:3.20.20.240 37 463 1.1E-130 T 12-10-2018 N288_17715 5a63e6cb08397840a4a9bbfe7fcf7e3c 619 Gene3D G3DSA:3.40.50.280 485 616 1.7E-22 T 12-10-2018 N288_20455 339bc6ffdd2a34110c14c10d47382f91 636 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 1 609 39.427 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 N288_20455 339bc6ffdd2a34110c14c10d47382f91 636 Pfam PF00128 Alpha amylase, catalytic domain 167 268 4.9E-8 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_20455 339bc6ffdd2a34110c14c10d47382f91 636 Gene3D G3DSA:2.60.40.1180 505 609 3.3E-37 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_20455 339bc6ffdd2a34110c14c10d47382f91 636 Gene3D G3DSA:3.20.20.80 115 504 1.3E-148 T 12-10-2018 N288_20455 339bc6ffdd2a34110c14c10d47382f91 636 SUPERFAMILY SSF51445 78 497 2.45E-107 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_20455 339bc6ffdd2a34110c14c10d47382f91 636 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 16 98 2.0E-21 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 N288_20455 339bc6ffdd2a34110c14c10d47382f91 636 SUPERFAMILY SSF81296 6 112 3.92E-21 T 12-10-2018 IPR014756 Immunoglobulin E-set N288_20455 339bc6ffdd2a34110c14c10d47382f91 636 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 1 607 2.1E-259 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 N288_20455 339bc6ffdd2a34110c14c10d47382f91 636 PIRSF PIRSF000463 1 619 4.6E-254 T 12-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 N288_20455 339bc6ffdd2a34110c14c10d47382f91 636 SMART SM00642 142 494 1.8E-7 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_20455 339bc6ffdd2a34110c14c10d47382f91 636 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 510 608 1.4E-22 T 12-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 N288_20455 339bc6ffdd2a34110c14c10d47382f91 636 SUPERFAMILY SSF51011 506 609 2.01E-33 T 12-10-2018 N288_20455 339bc6ffdd2a34110c14c10d47382f91 636 Gene3D G3DSA:2.60.40.10 1 112 1.7E-38 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_20140 a03503d4680b463487c19503b41a183f 258 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 5 258 9.7E-111 T 12-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 N288_20140 a03503d4680b463487c19503b41a183f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.3E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20140 a03503d4680b463487c19503b41a183f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.3E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20140 a03503d4680b463487c19503b41a183f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.3E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20140 a03503d4680b463487c19503b41a183f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.3E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20140 a03503d4680b463487c19503b41a183f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.3E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20140 a03503d4680b463487c19503b41a183f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.3E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20140 a03503d4680b463487c19503b41a183f 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.0E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20140 a03503d4680b463487c19503b41a183f 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.0E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20140 a03503d4680b463487c19503b41a183f 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.0E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_20140 a03503d4680b463487c19503b41a183f 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_20140 a03503d4680b463487c19503b41a183f 258 SUPERFAMILY SSF51735 3 257 1.94E-83 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_20140 a03503d4680b463487c19503b41a183f 258 Gene3D G3DSA:3.40.50.720 1 258 2.1E-81 T 12-10-2018 N288_20140 a03503d4680b463487c19503b41a183f 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 256 1.5E-65 T 12-10-2018 N288_00395 5e6135d822dd954594d1696ba13e8a3c 156 SUPERFAMILY SSF50249 4 85 4.29E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_00395 5e6135d822dd954594d1696ba13e8a3c 156 SMART SM00316 4 74 1.0E-26 T 12-10-2018 IPR022967 RNA-binding domain, S1 N288_00395 5e6135d822dd954594d1696ba13e8a3c 156 Gene3D G3DSA:2.40.50.140 1 84 2.2E-29 T 12-10-2018 N288_00395 5e6135d822dd954594d1696ba13e8a3c 156 Pfam PF00575 S1 RNA binding domain 4 74 5.5E-22 T 12-10-2018 IPR003029 S1 domain GO:0003676 N288_09280 33c6e420cc3329a9a9aa8dcdf79deb77 87 Pfam PF02325 YGGT family 10 76 6.1E-25 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 N288_18050 aeb9fe17bc1615a7648c2d64e5936ba6 355 Pfam PF00437 Type II/IV secretion system protein 13 275 9.4E-69 T 12-10-2018 IPR001482 Type II/IV secretion system protein N288_18050 aeb9fe17bc1615a7648c2d64e5936ba6 355 SMART SM00382 136 260 0.0025 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_18050 aeb9fe17bc1615a7648c2d64e5936ba6 355 Gene3D G3DSA:3.40.50.300 111 353 9.6E-67 T 12-10-2018 N288_18050 aeb9fe17bc1615a7648c2d64e5936ba6 355 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 204 218 - T 12-10-2018 IPR001482 Type II/IV secretion system protein N288_18050 aeb9fe17bc1615a7648c2d64e5936ba6 355 Gene3D G3DSA:3.30.450.90 1 110 8.5E-27 T 12-10-2018 N288_18050 aeb9fe17bc1615a7648c2d64e5936ba6 355 SUPERFAMILY SSF52540 2 306 3.9E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_24815 df8a1230e3f7bc7e81b5d339a2d50cb0 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 5.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_24815 df8a1230e3f7bc7e81b5d339a2d50cb0 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 5.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_24815 df8a1230e3f7bc7e81b5d339a2d50cb0 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 5.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_24815 df8a1230e3f7bc7e81b5d339a2d50cb0 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 5.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_24815 df8a1230e3f7bc7e81b5d339a2d50cb0 145 SMART SM00347 29 129 1.9E-19 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_24815 df8a1230e3f7bc7e81b5d339a2d50cb0 145 Gene3D G3DSA:1.10.10.10 1 143 2.6E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_24815 df8a1230e3f7bc7e81b5d339a2d50cb0 145 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site N288_24815 df8a1230e3f7bc7e81b5d339a2d50cb0 145 Pfam PF01047 MarR family 37 93 1.4E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_24815 df8a1230e3f7bc7e81b5d339a2d50cb0 145 SUPERFAMILY SSF46785 25 141 2.13E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_06010 0db01714a41888c80a9225f5b8340ca2 222 Gene3D G3DSA:3.30.70.120 2 97 2.8E-8 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal N288_06010 0db01714a41888c80a9225f5b8340ca2 222 Gene3D G3DSA:3.30.70.120 120 222 3.8E-16 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal N288_06010 0db01714a41888c80a9225f5b8340ca2 222 Pfam PF00543 Nitrogen regulatory protein P-II 127 220 1.6E-5 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 N288_06010 0db01714a41888c80a9225f5b8340ca2 222 SUPERFAMILY SSF54913 124 221 1.24E-18 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta N288_06010 0db01714a41888c80a9225f5b8340ca2 222 SUPERFAMILY SSF54913 4 108 1.72E-12 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta N288_06010 0db01714a41888c80a9225f5b8340ca2 222 SMART SM00938 127 221 4.1E-4 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 N288_09755 32b3cc5232d73484ed2ad5ed8df0ac44 332 SUPERFAMILY SSF101801 251 328 2.22E-17 T 12-10-2018 IPR036429 SpoA-like superfamily N288_09755 32b3cc5232d73484ed2ad5ed8df0ac44 332 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 254 323 4.5E-21 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) N288_09755 32b3cc5232d73484ed2ad5ed8df0ac44 332 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 324 2.1E-116 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 N288_09755 32b3cc5232d73484ed2ad5ed8df0ac44 332 Gene3D G3DSA:3.40.1550.10 48 235 4.0E-61 T 12-10-2018 IPR028976 CheC-like superfamily N288_09755 32b3cc5232d73484ed2ad5ed8df0ac44 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 1.6E-29 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 N288_09755 32b3cc5232d73484ed2ad5ed8df0ac44 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 91 107 1.6E-29 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 N288_09755 32b3cc5232d73484ed2ad5ed8df0ac44 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 1.6E-29 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 N288_09755 32b3cc5232d73484ed2ad5ed8df0ac44 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 116 135 1.6E-29 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 N288_09755 32b3cc5232d73484ed2ad5ed8df0ac44 332 PIRSF PIRSF002888 2 332 1.8E-118 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 N288_09755 32b3cc5232d73484ed2ad5ed8df0ac44 332 SUPERFAMILY SSF103039 47 232 4.32E-33 T 12-10-2018 IPR028976 CheC-like superfamily N288_09755 32b3cc5232d73484ed2ad5ed8df0ac44 332 Pfam PF02154 Flagellar motor switch protein FliM 40 230 5.5E-75 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 N288_09755 32b3cc5232d73484ed2ad5ed8df0ac44 332 Gene3D G3DSA:2.30.330.10 239 329 3.1E-9 T 12-10-2018 IPR036429 SpoA-like superfamily N288_12270 55da8bd96e4e528b88eaafefa385300f 405 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 196 404 2.1E-73 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 N288_12270 55da8bd96e4e528b88eaafefa385300f 405 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.8E-24 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 N288_12270 55da8bd96e4e528b88eaafefa385300f 405 Pfam PF07670 Nucleoside recognition 94 187 9.1E-7 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 N288_12270 55da8bd96e4e528b88eaafefa385300f 405 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 404 2.0E-144 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 N288_22590 e8d392a17a772a751bc8624562b10844 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 283 1.2E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_22590 e8d392a17a772a751bc8624562b10844 290 Gene3D G3DSA:1.10.3720.10 2 281 1.3E-73 T 12-10-2018 IPR035906 MetI-like superfamily N288_22590 e8d392a17a772a751bc8624562b10844 290 SUPERFAMILY SSF161098 11 290 2.04E-60 T 12-10-2018 IPR035906 MetI-like superfamily N288_24445 a6ef605f8a6d6228bb5796b31047c10d 471 SUPERFAMILY SSF103473 32 451 1.14E-68 T 12-10-2018 IPR036259 MFS transporter superfamily N288_24445 a6ef605f8a6d6228bb5796b31047c10d 471 ProSitePatterns PS00217 Sugar transport proteins signature 2. 152 177 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_24445 a6ef605f8a6d6228bb5796b31047c10d 471 Gene3D G3DSA:1.20.1250.20 38 463 5.1E-62 T 12-10-2018 N288_24445 a6ef605f8a6d6228bb5796b31047c10d 471 ProSitePatterns PS00216 Sugar transport proteins signature 1. 321 338 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_24445 a6ef605f8a6d6228bb5796b31047c10d 471 Pfam PF07690 Major Facilitator Superfamily 277 443 9.5E-12 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_24445 a6ef605f8a6d6228bb5796b31047c10d 471 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 48 441 4.8E-134 T 12-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 N288_24445 a6ef605f8a6d6228bb5796b31047c10d 471 Pfam PF00083 Sugar (and other) transporter 42 252 4.3E-23 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 N288_05760 ecef299a8e7a582e7cd721f9f9a6aeb2 156 PIRSF PIRSF000239 1 153 4.1E-27 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 N288_05760 ecef299a8e7a582e7cd721f9f9a6aeb2 156 Pfam PF00578 AhpC/TSA family 6 132 2.9E-41 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 N288_05760 ecef299a8e7a582e7cd721f9f9a6aeb2 156 SUPERFAMILY SSF52833 3 153 1.11E-54 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_05760 ecef299a8e7a582e7cd721f9f9a6aeb2 156 Gene3D G3DSA:3.40.30.10 2 154 1.2E-54 T 12-10-2018 N288_01555 ebcd956b2336fc12a1d29ce603f6dd47 264 PRINTS PR00046 Major sigma-70 factor signature 58 71 2.7E-8 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_01555 ebcd956b2336fc12a1d29ce603f6dd47 264 PRINTS PR00046 Major sigma-70 factor signature 206 218 2.7E-8 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_01555 ebcd956b2336fc12a1d29ce603f6dd47 264 PRINTS PR00046 Major sigma-70 factor signature 223 238 2.7E-8 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_01555 ebcd956b2336fc12a1d29ce603f6dd47 264 PRINTS PR00046 Major sigma-70 factor signature 238 249 2.7E-8 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_01555 ebcd956b2336fc12a1d29ce603f6dd47 264 Gene3D G3DSA:1.20.120.1810 1 102 1.3E-15 T 12-10-2018 N288_01555 ebcd956b2336fc12a1d29ce603f6dd47 264 SUPERFAMILY SSF88659 177 255 1.07E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_01555 ebcd956b2336fc12a1d29ce603f6dd47 264 Gene3D G3DSA:1.10.10.10 185 258 9.8E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_01555 ebcd956b2336fc12a1d29ce603f6dd47 264 TIGRFAM TIGR02941 Sigma_B: RNA polymerase sigma-B factor 1 254 1.1E-128 T 12-10-2018 IPR014288 RNA polymerase sigma-B factor GO:0016987 N288_01555 ebcd956b2336fc12a1d29ce603f6dd47 264 SUPERFAMILY SSF88659 107 183 4.23E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_01555 ebcd956b2336fc12a1d29ce603f6dd47 264 Pfam PF04545 Sigma-70, region 4 202 251 1.1E-16 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 N288_01555 ebcd956b2336fc12a1d29ce603f6dd47 264 Pfam PF04539 Sigma-70 region 3 113 187 4.2E-17 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 N288_01555 ebcd956b2336fc12a1d29ce603f6dd47 264 Gene3D G3DSA:1.10.10.10 104 156 3.2E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_01555 ebcd956b2336fc12a1d29ce603f6dd47 264 SUPERFAMILY SSF88946 13 103 9.55E-26 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_01555 ebcd956b2336fc12a1d29ce603f6dd47 264 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 28 253 1.6E-89 T 12-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_01555 ebcd956b2336fc12a1d29ce603f6dd47 264 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 252 3.7E-34 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_01555 ebcd956b2336fc12a1d29ce603f6dd47 264 Pfam PF04542 Sigma-70 region 2 34 103 3.8E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_17185 59839209ce271982f8391b531b021dc2 301 SUPERFAMILY SSF46955 8 76 2.75E-17 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily N288_17185 59839209ce271982f8391b531b021dc2 301 Pfam PF02607 B12 binding domain 98 167 3.4E-13 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_17185 59839209ce271982f8391b531b021dc2 301 Pfam PF13411 MerR HTH family regulatory protein 8 75 4.7E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_17185 59839209ce271982f8391b531b021dc2 301 Gene3D G3DSA:1.10.1240.10 94 170 2.5E-23 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_17185 59839209ce271982f8391b531b021dc2 301 SUPERFAMILY SSF52242 179 282 1.29E-12 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 N288_17185 59839209ce271982f8391b531b021dc2 301 Pfam PF02310 B12 binding domain 180 292 2.1E-14 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 N288_17185 59839209ce271982f8391b531b021dc2 301 SMART SM00422 8 77 1.5E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_17185 59839209ce271982f8391b531b021dc2 301 Gene3D G3DSA:1.10.1660.10 2 75 1.0E-24 T 12-10-2018 N288_17185 59839209ce271982f8391b531b021dc2 301 Gene3D G3DSA:3.40.50.280 178 288 6.7E-16 T 12-10-2018 N288_01895 3f5609febd94d800f4c9fd67f2b12b69 161 SUPERFAMILY SSF69118 13 150 6.89E-18 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 N288_01895 3f5609febd94d800f4c9fd67f2b12b69 161 Gene3D G3DSA:1.20.1290.10 8 150 2.5E-13 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 N288_09265 f91254ec45b295902c2c7eade26c3e4b 275 SUPERFAMILY SSF64438 20 270 1.61E-75 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic N288_09265 f91254ec45b295902c2c7eade26c3e4b 275 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 29 267 2.9E-68 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase N288_09265 f91254ec45b295902c2c7eade26c3e4b 275 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 37 268 9.8E-53 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase N288_09265 f91254ec45b295902c2c7eade26c3e4b 275 Gene3D G3DSA:3.60.140.10 3 273 3.8E-87 T 12-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily N288_15910 86e8313b8a026368ec3ebfef96b72ab3 327 SUPERFAMILY SSF54506 151 284 1.48E-26 T 12-10-2018 N288_15910 86e8313b8a026368ec3ebfef96b72ab3 327 SUPERFAMILY SSF54506 3 137 1.31E-30 T 12-10-2018 N288_15910 86e8313b8a026368ec3ebfef96b72ab3 327 Pfam PF01678 Diaminopimelate epimerase 6 109 3.1E-23 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 N288_15910 86e8313b8a026368ec3ebfef96b72ab3 327 Pfam PF01678 Diaminopimelate epimerase 165 269 1.7E-11 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 N288_15910 86e8313b8a026368ec3ebfef96b72ab3 327 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 289 30.21 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 N288_15910 86e8313b8a026368ec3ebfef96b72ab3 327 Gene3D G3DSA:3.10.310.10 6 283 8.8E-69 T 12-10-2018 N288_15910 86e8313b8a026368ec3ebfef96b72ab3 327 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 68 82 - T 12-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 N288_15910 86e8313b8a026368ec3ebfef96b72ab3 327 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 5 285 4.6E-58 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 N288_15910 86e8313b8a026368ec3ebfef96b72ab3 327 Gene3D G3DSA:3.10.310.10 126 279 8.8E-69 T 12-10-2018 N288_24580 70a96d6800136e73f91c8e0bba9f0f5d 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 192 211 6.8E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24580 70a96d6800136e73f91c8e0bba9f0f5d 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 120 131 6.8E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24580 70a96d6800136e73f91c8e0bba9f0f5d 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 180 6.8E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24580 70a96d6800136e73f91c8e0bba9f0f5d 289 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 53 286 1.1E-62 T 12-10-2018 N288_24580 70a96d6800136e73f91c8e0bba9f0f5d 289 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 179 207 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_24580 70a96d6800136e73f91c8e0bba9f0f5d 289 SUPERFAMILY SSF51735 43 287 4.36E-82 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_24580 70a96d6800136e73f91c8e0bba9f0f5d 289 Gene3D G3DSA:3.40.50.720 2 287 4.4E-89 T 12-10-2018 N288_24580 70a96d6800136e73f91c8e0bba9f0f5d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 131 4.8E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24580 70a96d6800136e73f91c8e0bba9f0f5d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 230 4.8E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24580 70a96d6800136e73f91c8e0bba9f0f5d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 45 62 4.8E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24580 70a96d6800136e73f91c8e0bba9f0f5d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 251 271 4.8E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24580 70a96d6800136e73f91c8e0bba9f0f5d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 182 4.8E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24580 70a96d6800136e73f91c8e0bba9f0f5d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 211 4.8E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_19625 25f0cbb13b4be6d743130012d871d2f9 128 Pfam PF04186 FxsA cytoplasmic membrane protein 6 113 6.1E-35 T 12-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 N288_18985 b89cc440f98ad18dbe2e00d73c8f1f1f 182 SMART SM01317 59 171 9.3E-23 T 12-10-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal N288_18985 b89cc440f98ad18dbe2e00d73c8f1f1f 182 SUPERFAMILY SSF55890 4 173 1.96E-43 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 N288_18985 b89cc440f98ad18dbe2e00d73c8f1f1f 182 Gene3D G3DSA:1.10.287.130 1 57 2.3E-25 T 12-10-2018 N288_18985 b89cc440f98ad18dbe2e00d73c8f1f1f 182 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 7 57 2.0E-20 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain N288_18985 b89cc440f98ad18dbe2e00d73c8f1f1f 182 Gene3D G3DSA:3.30.565.30 58 174 1.5E-33 T 12-10-2018 IPR037100 Sporulation initiation phosphotransferase B, C-terminal domain superfamily N288_18985 b89cc440f98ad18dbe2e00d73c8f1f1f 182 Pfam PF14682 Sporulation initiation phospho-transferase B, C-terminal 60 169 4.7E-37 T 12-10-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal N288_25630 b3a9526148b44f2debd39b3049ba0a1d 149 SUPERFAMILY SSF55729 5 140 4.15E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_25630 b3a9526148b44f2debd39b3049ba0a1d 149 Gene3D G3DSA:3.40.630.30 47 147 7.1E-28 T 12-10-2018 N288_25630 b3a9526148b44f2debd39b3049ba0a1d 149 Pfam PF00583 Acetyltransferase (GNAT) family 44 132 2.0E-19 T 12-10-2018 IPR000182 GNAT domain N288_18590 a54a5417bdb2dbee36ea6ec56aaaba51 367 SUPERFAMILY SSF52540 66 278 4.72E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_18590 a54a5417bdb2dbee36ea6ec56aaaba51 367 Pfam PF01926 50S ribosome-binding GTPase 163 225 3.1E-14 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_18590 a54a5417bdb2dbee36ea6ec56aaaba51 367 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 7 367 2.8E-160 T 12-10-2018 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH N288_18590 a54a5417bdb2dbee36ea6ec56aaaba51 367 Gene3D G3DSA:3.40.50.300 57 225 2.1E-50 T 12-10-2018 N288_19390 ebe6ab471eba34fbe0db8bcbe30c38a0 104 Gene3D G3DSA:3.40.30.10 1 103 1.1E-35 T 12-10-2018 N288_19390 ebe6ab471eba34fbe0db8bcbe30c38a0 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 N288_19390 ebe6ab471eba34fbe0db8bcbe30c38a0 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 103 3.0E-39 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 N288_19390 ebe6ab471eba34fbe0db8bcbe30c38a0 104 SUPERFAMILY SSF52833 3 103 8.68E-37 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_19390 ebe6ab471eba34fbe0db8bcbe30c38a0 104 PRINTS PR00421 Thioredoxin family signature 20 28 1.3E-8 T 12-10-2018 N288_19390 ebe6ab471eba34fbe0db8bcbe30c38a0 104 PRINTS PR00421 Thioredoxin family signature 68 79 1.3E-8 T 12-10-2018 N288_19390 ebe6ab471eba34fbe0db8bcbe30c38a0 104 PRINTS PR00421 Thioredoxin family signature 28 37 1.3E-8 T 12-10-2018 N288_19390 ebe6ab471eba34fbe0db8bcbe30c38a0 104 PIRSF PIRSF000077 1 104 3.2E-42 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 N288_19390 ebe6ab471eba34fbe0db8bcbe30c38a0 104 Pfam PF00085 Thioredoxin 5 103 4.3E-31 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 N288_03255 0da851ff58022513548a5c437143379a 125 SUPERFAMILY SSF56112 16 107 3.06E-7 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_03255 0da851ff58022513548a5c437143379a 125 Pfam PF01636 Phosphotransferase enzyme family 32 108 3.6E-6 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase N288_03255 0da851ff58022513548a5c437143379a 125 Gene3D G3DSA:3.30.200.20 15 103 9.1E-27 T 12-10-2018 N288_07965 62b29b6b713f74c7f009c0df46b810e5 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 300 3.9E-20 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_07965 62b29b6b713f74c7f009c0df46b810e5 333 Gene3D G3DSA:3.40.50.300 2 332 5.2E-107 T 12-10-2018 N288_07965 62b29b6b713f74c7f009c0df46b810e5 333 Pfam PF00005 ABC transporter 26 184 2.4E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_07965 62b29b6b713f74c7f009c0df46b810e5 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 2.9E-27 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_07965 62b29b6b713f74c7f009c0df46b810e5 333 SMART SM00382 34 234 1.5E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_07965 62b29b6b713f74c7f009c0df46b810e5 333 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_07965 62b29b6b713f74c7f009c0df46b810e5 333 SUPERFAMILY SSF52540 5 255 1.66E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_10695 2623181bfbff46fbbf053638df01c0f3 740 SMART SM00342 652 735 3.2E-31 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_10695 2623181bfbff46fbbf053638df01c0f3 740 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 689 731 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 N288_10695 2623181bfbff46fbbf053638df01c0f3 740 SUPERFAMILY SSF46689 688 739 2.96E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_10695 2623181bfbff46fbbf053638df01c0f3 740 Gene3D G3DSA:1.10.10.60 635 684 6.8E-16 T 12-10-2018 N288_10695 2623181bfbff46fbbf053638df01c0f3 740 Gene3D G3DSA:1.10.10.60 685 739 9.5E-18 T 12-10-2018 N288_10695 2623181bfbff46fbbf053638df01c0f3 740 Pfam PF12833 Helix-turn-helix domain 658 736 2.5E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_10695 2623181bfbff46fbbf053638df01c0f3 740 SUPERFAMILY SSF46689 640 686 7.26E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_16400 0491d45b1f8d98c6eda8c23f04bfe851 370 PIRSF PIRSF020979 1 367 5.0E-89 T 12-10-2018 IPR011215 Phosphoribosyl transferase N288_16400 0491d45b1f8d98c6eda8c23f04bfe851 370 Pfam PF11202 Phosphoribosyl transferase (PRTase) 10 257 1.3E-108 T 12-10-2018 IPR011215 Phosphoribosyl transferase N288_16400 0491d45b1f8d98c6eda8c23f04bfe851 370 Pfam PF15608 PELOTA RNA binding domain 286 365 4.4E-34 T 12-10-2018 IPR028157 PELOTA RNA-binding domain N288_13400 5b1323654b29a5d88429fa5a33b98ee3 219 SUPERFAMILY SSF48498 98 172 4.45E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily N288_13400 5b1323654b29a5d88429fa5a33b98ee3 219 Gene3D G3DSA:1.10.357.10 17 199 7.2E-27 T 12-10-2018 N288_13400 5b1323654b29a5d88429fa5a33b98ee3 219 SUPERFAMILY SSF46689 17 82 6.48E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_13400 5b1323654b29a5d88429fa5a33b98ee3 219 ProSitePatterns PS01081 TetR-type HTH domain signature. 41 72 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site N288_13400 5b1323654b29a5d88429fa5a33b98ee3 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 74 5.0E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_13400 5b1323654b29a5d88429fa5a33b98ee3 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 3.1E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_13400 5b1323654b29a5d88429fa5a33b98ee3 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 3.1E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_25495 cae6767471b1d7482b9c50bad3c3c3fb 131 SUPERFAMILY SSF52499 3 115 1.7E-23 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 N288_25495 cae6767471b1d7482b9c50bad3c3c3fb 131 Pfam PF00857 Isochorismatase family 4 114 3.0E-15 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 N288_25495 cae6767471b1d7482b9c50bad3c3c3fb 131 Gene3D G3DSA:3.40.50.850 1 118 9.6E-22 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 N288_24635 204e7326fad6b9b1eae51a465a77141e 143 PIRSF PIRSF030042 6 141 9.0E-42 T 12-10-2018 IPR016942 Uncharacterised conserved protein UCP030042 N288_24635 204e7326fad6b9b1eae51a465a77141e 143 Pfam PF14340 Domain of unknown function (DUF4395) 8 133 1.7E-31 T 12-10-2018 IPR025508 Domain of unknown function DUF4395 N288_24285 31798cf46c63e3c3c8515f86ded656dc 240 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 126 140 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 N288_24285 31798cf46c63e3c3c8515f86ded656dc 240 Pfam PF13649 Methyltransferase domain 40 132 6.8E-24 T 12-10-2018 N288_24285 31798cf46c63e3c3c8515f86ded656dc 240 SUPERFAMILY SSF53335 14 187 1.11E-38 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_24285 31798cf46c63e3c3c8515f86ded656dc 240 Gene3D G3DSA:3.40.50.150 10 240 1.4E-41 T 12-10-2018 N288_23305 c78da1c4b44ad55487da0086217d25a4 393 Pfam PF00534 Glycosyl transferases group 1 209 343 7.3E-25 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 N288_23305 c78da1c4b44ad55487da0086217d25a4 393 Gene3D G3DSA:3.40.50.2000 191 373 4.6E-56 T 12-10-2018 N288_23305 c78da1c4b44ad55487da0086217d25a4 393 Gene3D G3DSA:3.40.50.2000 61 379 4.6E-56 T 12-10-2018 N288_23305 c78da1c4b44ad55487da0086217d25a4 393 Pfam PF13439 Glycosyltransferase Family 4 73 189 2.1E-13 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 N288_23305 c78da1c4b44ad55487da0086217d25a4 393 SUPERFAMILY SSF53756 85 391 4.34E-56 T 12-10-2018 N288_23855 7ee92826fba7faac2c62e3e0904eb00f 206 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 174 187 - T 12-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 N288_23855 7ee92826fba7faac2c62e3e0904eb00f 206 PIRSF PIRSF035805 5 202 7.9E-66 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 N288_23855 7ee92826fba7faac2c62e3e0904eb00f 206 SUPERFAMILY SSF52540 8 142 2.04E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_23855 7ee92826fba7faac2c62e3e0904eb00f 206 SUPERFAMILY SSF57716 142 193 1.24E-16 T 12-10-2018 N288_23855 7ee92826fba7faac2c62e3e0904eb00f 206 Gene3D G3DSA:3.30.60.20 142 205 1.3E-27 T 12-10-2018 N288_23855 7ee92826fba7faac2c62e3e0904eb00f 206 Gene3D G3DSA:3.40.50.300 1 141 5.1E-59 T 12-10-2018 N288_23855 7ee92826fba7faac2c62e3e0904eb00f 206 Hamap MF_00124 Thymidine kinase [tdk]. 7 190 38.203 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 N288_23855 7ee92826fba7faac2c62e3e0904eb00f 206 Pfam PF00265 Thymidine kinase 8 187 3.5E-59 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 N288_18330 ce557b6d0ac1f264f5b3c4de77ce6f26 121 Gene3D G3DSA:1.10.760.10 51 121 9.9E-26 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 N288_18330 ce557b6d0ac1f264f5b3c4de77ce6f26 121 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 50 117 3.6E-13 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_18330 ce557b6d0ac1f264f5b3c4de77ce6f26 121 PIRSF PIRSF000025 1 121 3.2E-38 T 12-10-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 N288_18330 ce557b6d0ac1f264f5b3c4de77ce6f26 121 SUPERFAMILY SSF46626 6 120 4.51E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 N288_06770 ad210f202b42a3a58646d12515ed90bd 1001 SUPERFAMILY SSF52540 1 988 2.16E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_06770 ad210f202b42a3a58646d12515ed90bd 1001 Gene3D G3DSA:3.40.50.300 1 260 2.7E-18 T 12-10-2018 N288_06770 ad210f202b42a3a58646d12515ed90bd 1001 Gene3D G3DSA:3.40.50.300 771 987 6.6E-17 T 12-10-2018 N288_06770 ad210f202b42a3a58646d12515ed90bd 1001 Pfam PF13514 AAA domain 1 206 3.5E-22 T 12-10-2018 IPR038734 Uncharacterized protein YhaN, AAA domain N288_23835 a0e5e5b22975a6d2ba27ac58b7b6d2bf 292 Pfam PF05175 Methyltransferase small domain 104 197 3.0E-15 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 N288_23835 a0e5e5b22975a6d2ba27ac58b7b6d2bf 292 Gene3D G3DSA:1.10.8.10 6 88 6.4E-17 T 12-10-2018 N288_23835 a0e5e5b22975a6d2ba27ac58b7b6d2bf 292 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 30 284 4.8E-81 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 N288_23835 a0e5e5b22975a6d2ba27ac58b7b6d2bf 292 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 191 197 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 N288_23835 a0e5e5b22975a6d2ba27ac58b7b6d2bf 292 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 8 288 41.253 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 N288_23835 a0e5e5b22975a6d2ba27ac58b7b6d2bf 292 SUPERFAMILY SSF53335 8 285 2.62E-46 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_23835 a0e5e5b22975a6d2ba27ac58b7b6d2bf 292 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 7 286 8.9E-71 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 N288_23835 a0e5e5b22975a6d2ba27ac58b7b6d2bf 292 Gene3D G3DSA:3.40.50.150 89 289 5.3E-58 T 12-10-2018 N288_09275 4ac5c412e5d1a824d660c81088597148 146 Hamap MF_01197 Cell division protein SepF [sepF]. 1 136 20.837 T 12-10-2018 IPR023052 Cell division protein SepF GO:0090529 N288_09275 4ac5c412e5d1a824d660c81088597148 146 Gene3D G3DSA:3.30.110.150 50 146 3.1E-36 T 12-10-2018 IPR038594 SepF-like superfamily N288_09275 4ac5c412e5d1a824d660c81088597148 146 Pfam PF04472 Cell division protein SepF 57 128 1.7E-31 T 12-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 N288_04050 27169479b2ccb31be36d4a17bdb1135c 621 Pfam PF03235 Protein of unknown function DUF262 10 276 1.7E-36 T 12-10-2018 IPR004919 Domain of unknown function DUF262 N288_08875 f2aae93990263b6348ad5b292dccc1d6 156 SUPERFAMILY SSF55729 9 152 1.26E-10 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_08875 f2aae93990263b6348ad5b292dccc1d6 156 Pfam PF08445 FR47-like protein 80 138 8.1E-5 T 12-10-2018 IPR013653 FR47-like GO:0016747 N288_08875 f2aae93990263b6348ad5b292dccc1d6 156 Gene3D G3DSA:3.40.630.30 5 152 2.4E-9 T 12-10-2018 N288_14040 31be884253a15cbe6910416b519d2f0d 62 Pfam PF13314 Domain of unknown function (DUF4083) 2 57 1.1E-28 T 12-10-2018 IPR025143 Protein of unknown function DUF4083 N288_16430 9ff88a168ca873bf30c8e93fa29bf304 393 Pfam PF00155 Aminotransferase class I and II 33 381 8.0E-57 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 N288_16430 9ff88a168ca873bf30c8e93fa29bf304 393 Gene3D G3DSA:3.40.640.10 44 283 5.2E-109 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_16430 9ff88a168ca873bf30c8e93fa29bf304 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 235 248 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 N288_16430 9ff88a168ca873bf30c8e93fa29bf304 393 Gene3D G3DSA:3.90.1150.10 19 381 5.2E-109 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_16430 9ff88a168ca873bf30c8e93fa29bf304 393 SUPERFAMILY SSF53383 5 382 2.89E-98 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_06565 d984b6b427cf17d13c77e40c36a0a1ee 397 Pfam PF07690 Major Facilitator Superfamily 10 336 3.6E-13 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_06565 d984b6b427cf17d13c77e40c36a0a1ee 397 Gene3D G3DSA:1.20.1250.20 1 393 2.5E-28 T 12-10-2018 N288_06565 d984b6b427cf17d13c77e40c36a0a1ee 397 SUPERFAMILY SSF103473 4 395 8.76E-31 T 12-10-2018 IPR036259 MFS transporter superfamily N288_01655 1e52f33b4209c6e32ab22b274c3677ee 67 Pfam PF14044 NETI protein 9 64 1.2E-28 T 12-10-2018 IPR025930 NETI protein N288_22020 0f72d8677aa86c95ca6ea4b4ecc19588 735 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 8.2E-37 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 N288_22020 0f72d8677aa86c95ca6ea4b4ecc19588 735 SUPERFAMILY SSF64518 1 735 4.45E-83 T 12-10-2018 N288_22020 0f72d8677aa86c95ca6ea4b4ecc19588 735 Pfam PF00700 Bacterial flagellin C-terminal helical region 650 734 1.0E-22 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 N288_22020 0f72d8677aa86c95ca6ea4b4ecc19588 735 Gene3D G3DSA:1.20.1330.10 42 145 3.7E-44 T 12-10-2018 N288_22020 0f72d8677aa86c95ca6ea4b4ecc19588 735 Gene3D G3DSA:1.10.8.410 687 735 6.2E-25 T 12-10-2018 N288_22020 0f72d8677aa86c95ca6ea4b4ecc19588 735 PRINTS PR00207 Flagellin signature 35 52 8.9E-11 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 N288_22020 0f72d8677aa86c95ca6ea4b4ecc19588 735 PRINTS PR00207 Flagellin signature 110 133 8.9E-11 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 N288_00930 853f9069fd3993631b2d3f5d51c1868f 239 TIGRFAM TIGR02883 spore_cwlD: N-acetylmuramoyl-L-alanine amidase CwlD 42 228 4.5E-84 T 12-10-2018 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD MetaCyc: PWY-7883 N288_00930 853f9069fd3993631b2d3f5d51c1868f 239 SUPERFAMILY SSF53187 42 230 2.89E-49 T 12-10-2018 N288_00930 853f9069fd3993631b2d3f5d51c1868f 239 Gene3D G3DSA:3.40.630.40 40 234 7.1E-54 T 12-10-2018 N288_00930 853f9069fd3993631b2d3f5d51c1868f 239 SMART SM00646 115 226 1.5E-32 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 N288_00930 853f9069fd3993631b2d3f5d51c1868f 239 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 43 226 8.3E-47 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 N288_21370 30c78785813497b12dfdb4df58d36068 282 Gene3D G3DSA:2.160.20.120 28 235 2.6E-9 T 12-10-2018 N288_21370 30c78785813497b12dfdb4df58d36068 282 Pfam PF13349 Putative adhesin 42 281 3.3E-55 T 12-10-2018 IPR025164 Putative adhesin N288_03475 155f0e782943aa3b830e069c0b01c815 139 SUPERFAMILY SSF52833 1 137 3.33E-5 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_03475 155f0e782943aa3b830e069c0b01c815 139 Pfam PF13911 AhpC/TSA antioxidant enzyme 1 120 3.5E-11 T 12-10-2018 IPR032801 Peroxiredoxin-like FAM213/AAED1 N288_24755 231e77b906277f31a2b237e71a793291 453 Pfam PF00672 HAMP domain 182 225 1.7E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_24755 231e77b906277f31a2b237e71a793291 453 SMART SM00387 344 453 1.2E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_24755 231e77b906277f31a2b237e71a793291 453 Gene3D G3DSA:1.20.1480.50 144 232 1.0E-13 T 12-10-2018 N288_24755 231e77b906277f31a2b237e71a793291 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 298 7.2E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_24755 231e77b906277f31a2b237e71a793291 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 452 1.2E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_24755 231e77b906277f31a2b237e71a793291 453 SUPERFAMILY SSF55874 288 453 2.75E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_24755 231e77b906277f31a2b237e71a793291 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 453 7.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_24755 231e77b906277f31a2b237e71a793291 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 7.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_24755 231e77b906277f31a2b237e71a793291 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 7.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_24755 231e77b906277f31a2b237e71a793291 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 7.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_24755 231e77b906277f31a2b237e71a793291 453 SUPERFAMILY SSF47384 218 299 7.46E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_24755 231e77b906277f31a2b237e71a793291 453 Gene3D G3DSA:3.30.565.10 300 453 4.7E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_24755 231e77b906277f31a2b237e71a793291 453 SMART SM00304 180 232 4.1E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_24755 231e77b906277f31a2b237e71a793291 453 SMART SM00388 233 299 1.9E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_24755 231e77b906277f31a2b237e71a793291 453 SUPERFAMILY SSF158472 181 228 4.84E-8 T 12-10-2018 N288_24755 231e77b906277f31a2b237e71a793291 453 Gene3D G3DSA:1.10.287.130 233 299 8.4E-20 T 12-10-2018 N288_16160 e0fa10684fc7fad55252dca8a89aed5a 75 Pfam PF06855 YozE SAM-like fold 4 69 5.5E-28 T 12-10-2018 IPR023089 YozE SAM-like domain N288_16160 e0fa10684fc7fad55252dca8a89aed5a 75 PIRSF PIRSF037262 1 74 4.2E-34 T 12-10-2018 IPR010673 Protein of unknown function UPF0346 N288_16160 e0fa10684fc7fad55252dca8a89aed5a 75 Hamap MF_01538 UPF0346 protein . 1 71 24.925 T 12-10-2018 IPR010673 Protein of unknown function UPF0346 N288_16160 e0fa10684fc7fad55252dca8a89aed5a 75 SUPERFAMILY SSF140652 3 73 4.97E-30 T 12-10-2018 IPR036806 YozE SAM-like superfamily N288_16160 e0fa10684fc7fad55252dca8a89aed5a 75 Gene3D G3DSA:1.10.150.260 2 71 4.4E-28 T 12-10-2018 IPR036806 YozE SAM-like superfamily N288_19705 f396ab9eb7548e3534effa84e90e33cc 364 Pfam PF00557 Metallopeptidase family M24 146 348 3.4E-66 T 12-10-2018 IPR000994 Peptidase M24 N288_19705 f396ab9eb7548e3534effa84e90e33cc 364 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 138 4.9E-28 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 N288_19705 f396ab9eb7548e3534effa84e90e33cc 364 Gene3D G3DSA:3.40.350.10 1 137 1.2E-40 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal N288_19705 f396ab9eb7548e3534effa84e90e33cc 364 Gene3D G3DSA:3.90.230.10 138 364 6.6E-84 T 12-10-2018 N288_19705 f396ab9eb7548e3534effa84e90e33cc 364 PRINTS PR00599 Methionine aminopeptidase-1 signature 218 234 5.5E-9 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_19705 f396ab9eb7548e3534effa84e90e33cc 364 PRINTS PR00599 Methionine aminopeptidase-1 signature 316 328 5.5E-9 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_19705 f396ab9eb7548e3534effa84e90e33cc 364 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 209 5.5E-9 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_19705 f396ab9eb7548e3534effa84e90e33cc 364 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 294 306 - T 12-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site N288_19705 f396ab9eb7548e3534effa84e90e33cc 364 SUPERFAMILY SSF55920 137 363 2.75E-82 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like N288_19705 f396ab9eb7548e3534effa84e90e33cc 364 SUPERFAMILY SSF53092 1 136 3.31E-36 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal N288_11310 cc9257390ccca10f1c7c6ebbfe282307 378 Gene3D G3DSA:3.40.50.620 165 376 4.8E-95 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_11310 cc9257390ccca10f1c7c6ebbfe282307 378 Pfam PF14306 PUA-like domain 5 154 7.3E-46 T 12-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 N288_11310 cc9257390ccca10f1c7c6ebbfe282307 378 Pfam PF01747 ATP-sulfurylase 164 374 1.8E-93 T 12-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 N288_11310 cc9257390ccca10f1c7c6ebbfe282307 378 SUPERFAMILY SSF88697 5 157 6.76E-45 T 12-10-2018 IPR015947 PUA-like superfamily N288_11310 cc9257390ccca10f1c7c6ebbfe282307 378 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 6 374 7.5E-133 T 12-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 N288_11310 cc9257390ccca10f1c7c6ebbfe282307 378 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 21 378 49.014 T 12-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 N288_11310 cc9257390ccca10f1c7c6ebbfe282307 378 Gene3D G3DSA:3.10.400.10 4 154 7.4E-44 T 12-10-2018 N288_11310 cc9257390ccca10f1c7c6ebbfe282307 378 SUPERFAMILY SSF52374 164 374 1.66E-83 T 12-10-2018 N288_22205 27342851212d34361fe3319ed52820f5 702 Pfam PF00395 S-layer homology domain 567 612 6.0E-14 T 12-10-2018 IPR001119 S-layer homology domain N288_22205 27342851212d34361fe3319ed52820f5 702 Pfam PF00395 S-layer homology domain 507 550 5.2E-11 T 12-10-2018 IPR001119 S-layer homology domain N288_22205 27342851212d34361fe3319ed52820f5 702 Pfam PF00395 S-layer homology domain 640 683 1.0E-9 T 12-10-2018 IPR001119 S-layer homology domain N288_24275 f7de9a762a3dd7e16cbd351fb4281336 551 SUPERFAMILY SSF51011 476 550 6.68E-17 T 12-10-2018 N288_24275 f7de9a762a3dd7e16cbd351fb4281336 551 PRINTS PR00110 Alpha-amylase signature 92 103 5.8E-6 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 N288_24275 f7de9a762a3dd7e16cbd351fb4281336 551 PRINTS PR00110 Alpha-amylase signature 193 204 5.8E-6 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 N288_24275 f7de9a762a3dd7e16cbd351fb4281336 551 PRINTS PR00110 Alpha-amylase signature 316 328 5.8E-6 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 N288_24275 f7de9a762a3dd7e16cbd351fb4281336 551 Gene3D G3DSA:3.20.20.80 171 476 2.4E-124 T 12-10-2018 N288_24275 f7de9a762a3dd7e16cbd351fb4281336 551 SMART SM00642 13 415 3.0E-167 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_24275 f7de9a762a3dd7e16cbd351fb4281336 551 Gene3D G3DSA:2.60.40.1180 477 551 7.3E-22 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_24275 f7de9a762a3dd7e16cbd351fb4281336 551 Gene3D G3DSA:3.20.20.80 1 109 3.0E-49 T 12-10-2018 N288_24275 f7de9a762a3dd7e16cbd351fb4281336 551 Pfam PF00128 Alpha amylase, catalytic domain 28 373 1.9E-118 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_24275 f7de9a762a3dd7e16cbd351fb4281336 551 SUPERFAMILY SSF51445 3 473 3.87E-158 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_24275 f7de9a762a3dd7e16cbd351fb4281336 551 Gene3D G3DSA:3.90.400.10 110 170 1.8E-33 T 12-10-2018 N288_24275 f7de9a762a3dd7e16cbd351fb4281336 551 Pfam PF16657 Maltogenic Amylase, C-terminal domain 476 547 2.3E-8 T 12-10-2018 IPR032091 Maltogenic Amylase, C-terminal N288_16650 4781cc77ec907534d7f54521e526a804 149 Pfam PF13690 Chemotaxis phosphatase CheX 44 121 5.6E-13 T 12-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain N288_16650 4781cc77ec907534d7f54521e526a804 149 Gene3D G3DSA:3.40.1550.10 3 149 1.9E-35 T 12-10-2018 IPR028976 CheC-like superfamily N288_16650 4781cc77ec907534d7f54521e526a804 149 SUPERFAMILY SSF103039 10 124 1.05E-18 T 12-10-2018 IPR028976 CheC-like superfamily N288_17305 f1a035f6b81e05b06284dbfb00c24257 395 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 50 393 8.6E-76 T 12-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 N288_17305 f1a035f6b81e05b06284dbfb00c24257 395 Pfam PF01578 Cytochrome C assembly protein 74 390 4.3E-33 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 N288_19880 27ca9f52e7797dfc9bc2fbff442a6d7c 959 Pfam PF00905 Penicillin binding protein transpeptidase domain 417 661 7.7E-28 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 N288_19880 27ca9f52e7797dfc9bc2fbff442a6d7c 959 SUPERFAMILY SSF53955 81 306 5.62E-63 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily N288_19880 27ca9f52e7797dfc9bc2fbff442a6d7c 959 Gene3D G3DSA:1.10.20.80 317 599 1.4E-133 T 12-10-2018 N288_19880 27ca9f52e7797dfc9bc2fbff442a6d7c 959 SUPERFAMILY SSF56601 266 741 1.67E-105 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_19880 27ca9f52e7797dfc9bc2fbff442a6d7c 959 Pfam PF00912 Transglycosylase 97 281 5.4E-55 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_19880 27ca9f52e7797dfc9bc2fbff442a6d7c 959 Gene3D G3DSA:1.10.3810.10 105 312 2.0E-67 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_19880 27ca9f52e7797dfc9bc2fbff442a6d7c 959 Gene3D G3DSA:3.40.710.10 374 704 1.4E-133 T 12-10-2018 N288_24465 834a2b76e1d491e2e6f857330e5bc366 773 Gene3D G3DSA:3.90.1170.50 1 121 6.6E-36 T 12-10-2018 N288_24465 834a2b76e1d491e2e6f857330e5bc366 773 SUPERFAMILY SSF56003 113 768 8.64E-159 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 N288_24465 834a2b76e1d491e2e6f857330e5bc366 773 Gene3D G3DSA:3.30.365.10 190 285 7.2E-61 T 12-10-2018 N288_24465 834a2b76e1d491e2e6f857330e5bc366 773 Gene3D G3DSA:3.30.365.10 126 354 7.2E-61 T 12-10-2018 N288_24465 834a2b76e1d491e2e6f857330e5bc366 773 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 156 703 6.1E-135 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 N288_24465 834a2b76e1d491e2e6f857330e5bc366 773 Gene3D G3DSA:3.30.365.10 451 624 3.9E-96 T 12-10-2018 N288_24465 834a2b76e1d491e2e6f857330e5bc366 773 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 18 121 3.7E-25 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead N288_24465 834a2b76e1d491e2e6f857330e5bc366 773 Gene3D G3DSA:3.30.365.10 372 763 3.9E-96 T 12-10-2018 N288_24465 834a2b76e1d491e2e6f857330e5bc366 773 SMART SM01008 18 121 5.5E-43 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead N288_24465 834a2b76e1d491e2e6f857330e5bc366 773 SUPERFAMILY SSF54665 2 142 1.24E-40 T 12-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily N288_22835 565174e6eccf8c070e64e5b26658e59b 479 SUPERFAMILY SSF51445 6 466 4.29E-139 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_22835 565174e6eccf8c070e64e5b26658e59b 479 Gene3D G3DSA:3.20.20.80 5 469 4.7E-124 T 12-10-2018 N288_22835 565174e6eccf8c070e64e5b26658e59b 479 Pfam PF00232 Glycosyl hydrolase family 1 7 469 1.7E-100 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_22835 565174e6eccf8c070e64e5b26658e59b 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 438 450 2.2E-12 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_22835 565174e6eccf8c070e64e5b26658e59b 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 369 377 2.2E-12 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_22835 565174e6eccf8c070e64e5b26658e59b 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 297 311 2.2E-12 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_22835 565174e6eccf8c070e64e5b26658e59b 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 2.2E-12 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_22835 565174e6eccf8c070e64e5b26658e59b 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 431 2.2E-12 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_07135 f95dd3b38d26aa27b5a1b6bd9148b990 405 Gene3D G3DSA:3.40.50.2300 161 378 1.4E-115 T 12-10-2018 N288_07135 f95dd3b38d26aa27b5a1b6bd9148b990 405 SUPERFAMILY SSF53822 39 396 1.18E-79 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_07135 f95dd3b38d26aa27b5a1b6bd9148b990 405 Gene3D G3DSA:3.40.50.2300 49 371 1.4E-115 T 12-10-2018 N288_07135 f95dd3b38d26aa27b5a1b6bd9148b990 405 Pfam PF13458 Periplasmic binding protein 39 377 2.5E-69 T 12-10-2018 IPR028081 Leucine-binding protein domain N288_18540 532087e7f1bd6761fd67091ef7862d72 775 Pfam PF03772 Competence protein 212 477 3.8E-68 T 12-10-2018 IPR004477 ComEC/Rec2-related protein N288_18540 532087e7f1bd6761fd67091ef7862d72 775 Pfam PF00753 Metallo-beta-lactamase superfamily 514 727 1.5E-18 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_18540 532087e7f1bd6761fd67091ef7862d72 775 SUPERFAMILY SSF56281 508 765 5.88E-50 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_18540 532087e7f1bd6761fd67091ef7862d72 775 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 107 757 1.2E-123 T 12-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 N288_18540 532087e7f1bd6761fd67091ef7862d72 775 SMART SM00849 516 728 1.1E-14 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_18540 532087e7f1bd6761fd67091ef7862d72 775 Pfam PF13567 Domain of unknown function (DUF4131) 26 167 6.7E-12 T 12-10-2018 IPR025405 Domain of unknown function DUF4131 N288_18540 532087e7f1bd6761fd67091ef7862d72 775 Gene3D G3DSA:3.60.15.10 505 771 5.8E-72 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_18540 532087e7f1bd6761fd67091ef7862d72 775 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 233 407 5.6E-37 T 12-10-2018 IPR004477 ComEC/Rec2-related protein N288_19585 3a15e341c05e1008b4c4867d136b3ab5 237 Gene3D G3DSA:3.40.50.2300 1 135 8.8E-40 T 12-10-2018 N288_19585 3a15e341c05e1008b4c4867d136b3ab5 237 Pfam PF00072 Response regulator receiver domain 5 114 3.0E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_19585 3a15e341c05e1008b4c4867d136b3ab5 237 SMART SM00862 156 232 2.7E-31 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_19585 3a15e341c05e1008b4c4867d136b3ab5 237 Gene3D G3DSA:1.10.10.10 136 237 2.5E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_19585 3a15e341c05e1008b4c4867d136b3ab5 237 SUPERFAMILY SSF46894 132 233 9.43E-33 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_19585 3a15e341c05e1008b4c4867d136b3ab5 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 232 2.5E-30 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_19585 3a15e341c05e1008b4c4867d136b3ab5 237 SMART SM00448 3 114 6.7E-47 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_19585 3a15e341c05e1008b4c4867d136b3ab5 237 SUPERFAMILY SSF52172 2 132 1.42E-43 T 12-10-2018 IPR011006 CheY-like superfamily N288_14115 29d7ed03e0bad35dc85ccde3d53782e9 189 Gene3D G3DSA:3.40.630.30 3 180 3.4E-15 T 12-10-2018 N288_14115 29d7ed03e0bad35dc85ccde3d53782e9 189 SUPERFAMILY SSF55729 22 176 1.46E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_14115 29d7ed03e0bad35dc85ccde3d53782e9 189 Pfam PF00583 Acetyltransferase (GNAT) family 56 151 3.5E-8 T 12-10-2018 IPR000182 GNAT domain N288_17830 deb3d02484a46b2e75ff9f38679da883 130 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 2 127 5.2E-45 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 N288_17830 deb3d02484a46b2e75ff9f38679da883 130 Pfam PF01029 NusB family 4 125 6.2E-39 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 N288_17830 deb3d02484a46b2e75ff9f38679da883 130 Gene3D G3DSA:1.10.940.10 1 130 9.5E-46 T 12-10-2018 IPR035926 NusB-like superfamily N288_17830 deb3d02484a46b2e75ff9f38679da883 130 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 1 129 24.837 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 N288_17830 deb3d02484a46b2e75ff9f38679da883 130 SUPERFAMILY SSF48013 2 126 3.79E-41 T 12-10-2018 IPR035926 NusB-like superfamily N288_02240 f947d2b8b8622cb64e7258ac08a40144 188 Pfam PF04542 Sigma-70 region 2 23 89 6.4E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_02240 f947d2b8b8622cb64e7258ac08a40144 188 Gene3D G3DSA:1.10.10.10 98 185 9.0E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_02240 f947d2b8b8622cb64e7258ac08a40144 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 177 2.7E-27 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_02240 f947d2b8b8622cb64e7258ac08a40144 188 SUPERFAMILY SSF88659 114 177 2.24E-11 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_02240 f947d2b8b8622cb64e7258ac08a40144 188 Gene3D G3DSA:1.10.1740.10 2 87 9.4E-21 T 12-10-2018 N288_02240 f947d2b8b8622cb64e7258ac08a40144 188 Pfam PF08281 Sigma-70, region 4 122 173 1.9E-10 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_02240 f947d2b8b8622cb64e7258ac08a40144 188 SUPERFAMILY SSF88946 7 104 2.67E-22 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_13265 5a3bc441c53b83a501beba3d9eac7d7d 72 Pfam PF13046 Protein of unknown function (DUF3906) 2 65 1.2E-30 T 12-10-2018 IPR024998 Protein of unknown function DUF3906 N288_13155 488f2de23c496f6eadb3e613fc46e491 157 Gene3D G3DSA:3.90.79.10 1 150 1.4E-36 T 12-10-2018 N288_13155 488f2de23c496f6eadb3e613fc46e491 157 SUPERFAMILY SSF55811 14 147 3.11E-31 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_13155 488f2de23c496f6eadb3e613fc46e491 157 Pfam PF00293 NUDIX domain 21 144 2.8E-21 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_13155 488f2de23c496f6eadb3e613fc46e491 157 PRINTS PR00502 NUDIX hydrolase family signature 43 57 2.5E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_13155 488f2de23c496f6eadb3e613fc46e491 157 PRINTS PR00502 NUDIX hydrolase family signature 57 72 2.5E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_13155 488f2de23c496f6eadb3e613fc46e491 157 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_12960 d1a29f404a449e455d7f5003cf78d194 186 SUPERFAMILY SSF88659 110 178 1.85E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_12960 d1a29f404a449e455d7f5003cf78d194 186 Pfam PF04545 Sigma-70, region 4 127 175 2.8E-11 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 N288_12960 d1a29f404a449e455d7f5003cf78d194 186 SUPERFAMILY SSF88946 2 103 4.12E-24 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_12960 d1a29f404a449e455d7f5003cf78d194 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 177 2.3E-32 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_12960 d1a29f404a449e455d7f5003cf78d194 186 Gene3D G3DSA:1.10.1740.10 6 88 2.9E-26 T 12-10-2018 N288_12960 d1a29f404a449e455d7f5003cf78d194 186 Gene3D G3DSA:1.10.10.10 92 180 3.5E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_12960 d1a29f404a449e455d7f5003cf78d194 186 Pfam PF04542 Sigma-70 region 2 24 91 2.0E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_21655 3b5c7f44635ea56f693696151c97bf86 327 Gene3D G3DSA:3.40.50.12300 3 323 6.2E-131 T 12-10-2018 IPR038136 Gluconeogenesis factor superfamily N288_21655 3b5c7f44635ea56f693696151c97bf86 327 Pfam PF01933 Uncharacterised protein family UPF0052 9 293 1.4E-109 T 12-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 N288_21655 3b5c7f44635ea56f693696151c97bf86 327 Hamap MF_00973 Gluconeogenesis factor. 5 319 36.525 T 12-10-2018 IPR010119 Gluconeogenesis factor N288_21655 3b5c7f44635ea56f693696151c97bf86 327 SUPERFAMILY SSF142338 6 314 1.05E-110 T 12-10-2018 N288_21655 3b5c7f44635ea56f693696151c97bf86 327 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 316 6.9E-129 T 12-10-2018 IPR010119 Gluconeogenesis factor N288_08275 4ffa4ff584072aa8cf14834e3c9a0110 250 SUPERFAMILY SSF52540 33 222 8.1E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_08275 4ffa4ff584072aa8cf14834e3c9a0110 250 Gene3D G3DSA:3.40.50.300 122 233 5.9E-12 T 12-10-2018 N288_08275 4ffa4ff584072aa8cf14834e3c9a0110 250 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 149 204 2.4E-8 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 N288_08275 4ffa4ff584072aa8cf14834e3c9a0110 250 Pfam PF13476 AAA domain 38 95 6.9E-8 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain N288_08275 4ffa4ff584072aa8cf14834e3c9a0110 250 Gene3D G3DSA:3.40.50.300 31 121 7.9E-9 T 12-10-2018 N288_08275 4ffa4ff584072aa8cf14834e3c9a0110 250 SMART SM00382 41 218 4.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_09790 bd611a872a9cafda5e5f650452d7e2dc 360 SUPERFAMILY SSF160544 250 357 1.7E-41 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal N288_09790 bd611a872a9cafda5e5f650452d7e2dc 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 16 38 8.9E-41 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 N288_09790 bd611a872a9cafda5e5f650452d7e2dc 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 234 251 8.9E-41 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 N288_09790 bd611a872a9cafda5e5f650452d7e2dc 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 308 329 8.9E-41 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 N288_09790 bd611a872a9cafda5e5f650452d7e2dc 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 214 232 8.9E-41 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 N288_09790 bd611a872a9cafda5e5f650452d7e2dc 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 278 293 8.9E-41 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 N288_09790 bd611a872a9cafda5e5f650452d7e2dc 360 Gene3D G3DSA:3.40.1690.10 224 360 1.4E-56 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal N288_09790 bd611a872a9cafda5e5f650452d7e2dc 360 Pfam PF01312 FlhB HrpN YscU SpaS Family 13 353 1.9E-132 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 N288_09790 bd611a872a9cafda5e5f650452d7e2dc 360 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 14 359 9.7E-134 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 N288_15275 1f7a5d36c9c86b49f6de58dfb9b1e038 318 SUPERFAMILY SSF52283 29 127 8.5E-16 T 12-10-2018 N288_15275 1f7a5d36c9c86b49f6de58dfb9b1e038 318 Gene3D G3DSA:3.40.50.720 24 306 1.6E-99 T 12-10-2018 N288_15275 1f7a5d36c9c86b49f6de58dfb9b1e038 318 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 218 234 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site N288_15275 1f7a5d36c9c86b49f6de58dfb9b1e038 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 28 310 8.0E-8 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 N288_15275 1f7a5d36c9c86b49f6de58dfb9b1e038 318 Gene3D G3DSA:3.40.50.720 98 285 1.6E-99 T 12-10-2018 N288_15275 1f7a5d36c9c86b49f6de58dfb9b1e038 318 SUPERFAMILY SSF51735 99 279 2.51E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_15275 1f7a5d36c9c86b49f6de58dfb9b1e038 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 278 1.0E-63 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 N288_12945 a3d013447feeabcf479ee2d758f6e01c 307 Gene3D G3DSA:2.40.260.10 23 224 6.0E-32 T 12-10-2018 IPR023365 Sortase domain superfamily N288_12945 a3d013447feeabcf479ee2d758f6e01c 307 SUPERFAMILY SSF63817 71 212 1.44E-17 T 12-10-2018 IPR023365 Sortase domain superfamily N288_12945 a3d013447feeabcf479ee2d758f6e01c 307 SUPERFAMILY SSF49265 225 305 9.99E-6 T 12-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 N288_12945 a3d013447feeabcf479ee2d758f6e01c 307 Pfam PF04203 Sortase family 74 212 2.4E-20 T 12-10-2018 IPR005754 Sortase family N288_12945 a3d013447feeabcf479ee2d758f6e01c 307 Gene3D G3DSA:2.60.40.10 226 307 1.1E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_10150 f8f0800fd78d43756c6af3b3753bff5f 86 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 84 2.2E-40 T 12-10-2018 IPR007347 Sporulation stage V, protein S N288_10150 f8f0800fd78d43756c6af3b3753bff5f 86 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 3 86 1.0E-32 T 12-10-2018 IPR007347 Sporulation stage V, protein S N288_10150 f8f0800fd78d43756c6af3b3753bff5f 86 Gene3D G3DSA:3.30.110.20 1 86 1.4E-36 T 12-10-2018 IPR036882 Alba-like domain superfamily GO:0003676 N288_11205 e65cc1b582b75c48932c3b8908fbee10 188 Gene3D G3DSA:3.90.1150.10 72 179 3.7E-24 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_11205 e65cc1b582b75c48932c3b8908fbee10 188 Pfam PF00266 Aminotransferase class-V 3 137 1.1E-7 T 12-10-2018 IPR000192 Aminotransferase class V domain N288_11205 e65cc1b582b75c48932c3b8908fbee10 188 Gene3D G3DSA:3.40.640.10 1 71 7.5E-17 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_11205 e65cc1b582b75c48932c3b8908fbee10 188 SUPERFAMILY SSF53383 2 174 9.52E-32 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_05325 855bbd446004d262a214ba70754e087d 238 Gene3D G3DSA:3.40.50.10420 45 236 9.5E-38 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily N288_05325 855bbd446004d262a214ba70754e087d 238 Hamap MF_02104 Lactate utilization protein C [lutC]. 5 235 47.08 T 12-10-2018 IPR022823 Lactate utilization protein C N288_05325 855bbd446004d262a214ba70754e087d 238 SUPERFAMILY SSF100950 46 236 2.3E-44 T 12-10-2018 IPR037171 NagB/RpiA transferase-like N288_05325 855bbd446004d262a214ba70754e087d 238 Pfam PF02589 LUD domain 52 235 8.1E-39 T 12-10-2018 IPR003741 LUD domain N288_03490 089ccc45fec3bda12b048d81e242d53b 129 Gene3D G3DSA:1.10.1200.120 1 127 1.2E-42 T 12-10-2018 IPR036019 Gated mechanosensitive channel N288_03490 089ccc45fec3bda12b048d81e242d53b 129 SUPERFAMILY SSF81330 10 120 1.44E-34 T 12-10-2018 IPR036019 Gated mechanosensitive channel N288_03490 089ccc45fec3bda12b048d81e242d53b 129 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 125 5.5E-50 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 N288_03490 089ccc45fec3bda12b048d81e242d53b 129 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 125 24.09 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 N288_03490 089ccc45fec3bda12b048d81e242d53b 129 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 12-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site N288_03490 089ccc45fec3bda12b048d81e242d53b 129 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 124 3.7E-46 T 12-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L N288_03490 089ccc45fec3bda12b048d81e242d53b 129 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 93 4.0E-12 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 N288_03490 089ccc45fec3bda12b048d81e242d53b 129 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 4.0E-12 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 N288_03490 089ccc45fec3bda12b048d81e242d53b 129 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 75 83 4.0E-12 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 N288_08085 a0f347ef797638458f336f58ee7cfd27 295 ProDom PD119415 TRANSGLUTAMINASE TRANSFERASE ACYLTRANSFERASE GAMMA-GLUTAMYLTRANSFERASE PROTEIN-GLUTAMINE TGASE SPORULATION TGL 69 290 6.0E-56 T 12-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 N288_08085 a0f347ef797638458f336f58ee7cfd27 295 Hamap MF_00727 Protein-glutamine gamma-glutamyltransferase [tgl]. 47 290 35.973 T 12-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 N288_16140 43a7ddb3c542618641acd773d60be5c4 377 Pfam PF10720 Protein of unknown function (DUF2515) 65 369 2.7E-119 T 12-10-2018 IPR019658 Protein of unknown function DUF2515 N288_22015 4b767fe44600c6bf9f8f05bb4e0a47aa 120 Gene3D G3DSA:3.30.160.170 19 116 8.5E-32 T 12-10-2018 IPR035924 FlaG-like superfamily N288_22015 4b767fe44600c6bf9f8f05bb4e0a47aa 120 Pfam PF03646 FlaG protein 35 118 4.9E-27 T 12-10-2018 IPR005186 FlaG protein N288_22015 4b767fe44600c6bf9f8f05bb4e0a47aa 120 SUPERFAMILY SSF160214 36 120 6.41E-28 T 12-10-2018 IPR035924 FlaG-like superfamily N288_17070 5b0c53866cdf0d0edbd5bc95aec5f4e9 492 SUPERFAMILY SSF52540 21 227 1.45E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_17070 5b0c53866cdf0d0edbd5bc95aec5f4e9 492 PIRSF PIRSF007466 1 492 9.0E-267 T 12-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 N288_17070 5b0c53866cdf0d0edbd5bc95aec5f4e9 492 TIGRFAM TIGR02836 spore_IV_A: stage IV sporulation protein A 1 492 8.0E-266 T 12-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 N288_17070 5b0c53866cdf0d0edbd5bc95aec5f4e9 492 Pfam PF09547 Stage IV sporulation protein A (spore_IV_A) 2 492 7.3E-225 T 12-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 N288_17070 5b0c53866cdf0d0edbd5bc95aec5f4e9 492 Gene3D G3DSA:3.40.50.300 12 235 7.7E-10 T 12-10-2018 N288_12400 55ac6d534bebe26171540ea7461fb674 292 Gene3D G3DSA:3.10.490.10 4 126 2.8E-29 T 12-10-2018 N288_12400 55ac6d534bebe26171540ea7461fb674 292 SUPERFAMILY SSF110857 4 129 7.19E-27 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily N288_12400 55ac6d534bebe26171540ea7461fb674 292 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 6 123 1.2E-20 T 12-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like N288_12400 55ac6d534bebe26171540ea7461fb674 292 Gene3D G3DSA:3.10.490.10 128 287 6.6E-54 T 12-10-2018 N288_12400 55ac6d534bebe26171540ea7461fb674 292 SUPERFAMILY SSF110857 136 263 2.75E-17 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily N288_12400 55ac6d534bebe26171540ea7461fb674 292 Pfam PF13772 AIG2-like family 194 274 1.0E-7 T 12-10-2018 N288_11115 a1bd16517ea309ceca89d777a727df22 315 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 116 2.3E-30 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 N288_11115 a1bd16517ea309ceca89d777a727df22 315 Gene3D G3DSA:3.30.360.10 131 315 7.8E-22 T 12-10-2018 N288_11115 a1bd16517ea309ceca89d777a727df22 315 SUPERFAMILY SSF51735 4 152 8.92E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_11115 a1bd16517ea309ceca89d777a727df22 315 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 197 4.8E-4 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 N288_11115 a1bd16517ea309ceca89d777a727df22 315 SUPERFAMILY SSF55347 129 302 2.18E-16 T 12-10-2018 N288_11115 a1bd16517ea309ceca89d777a727df22 315 Gene3D G3DSA:3.40.50.720 2 130 1.3E-38 T 12-10-2018 N288_25535 0bf240f6bee33493b8cc3765c43a3c13 463 Gene3D G3DSA:3.40.980.20 270 454 5.0E-33 T 12-10-2018 N288_25535 0bf240f6bee33493b8cc3765c43a3c13 463 SUPERFAMILY SSF142764 35 453 1.83E-102 T 12-10-2018 N288_25535 0bf240f6bee33493b8cc3765c43a3c13 463 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 280 446 5.4E-31 T 12-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain N288_25535 0bf240f6bee33493b8cc3765c43a3c13 463 Gene3D G3DSA:3.40.50.10840 34 263 3.0E-66 T 12-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily N288_25535 0bf240f6bee33493b8cc3765c43a3c13 463 Pfam PF07005 Putative sugar-binding N-terminal domain 35 256 2.6E-57 T 12-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain N288_15420 7310bf88872c10e7105da294bb25b760 308 SUPERFAMILY SSF161098 87 290 1.77E-17 T 12-10-2018 IPR035906 MetI-like superfamily N288_15420 7310bf88872c10e7105da294bb25b760 308 Gene3D G3DSA:1.10.3720.10 83 297 3.1E-17 T 12-10-2018 IPR035906 MetI-like superfamily N288_15420 7310bf88872c10e7105da294bb25b760 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 302 9.9E-40 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_11570 15390cc683317d8156f7a6c37ce3cd68 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_11570 15390cc683317d8156f7a6c37ce3cd68 255 Pfam PF00106 short chain dehydrogenase 8 205 2.3E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_11570 15390cc683317d8156f7a6c37ce3cd68 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_11570 15390cc683317d8156f7a6c37ce3cd68 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_11570 15390cc683317d8156f7a6c37ce3cd68 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_11570 15390cc683317d8156f7a6c37ce3cd68 255 Gene3D G3DSA:3.40.50.720 1 254 9.8E-73 T 12-10-2018 N288_11570 15390cc683317d8156f7a6c37ce3cd68 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 8.8E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_11570 15390cc683317d8156f7a6c37ce3cd68 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 8.8E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_11570 15390cc683317d8156f7a6c37ce3cd68 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 8.8E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_11570 15390cc683317d8156f7a6c37ce3cd68 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.8E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_11570 15390cc683317d8156f7a6c37ce3cd68 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 8.8E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_11570 15390cc683317d8156f7a6c37ce3cd68 255 SUPERFAMILY SSF51735 3 250 8.11E-61 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_25845 a9d3f7edb1f0d35eaaa376f0fb4de1f5 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 230 9.5E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_25845 a9d3f7edb1f0d35eaaa376f0fb4de1f5 236 Gene3D G3DSA:3.40.50.2300 1 131 2.3E-41 T 12-10-2018 N288_25845 a9d3f7edb1f0d35eaaa376f0fb4de1f5 236 SMART SM00862 154 230 1.7E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_25845 a9d3f7edb1f0d35eaaa376f0fb4de1f5 236 Gene3D G3DSA:1.10.10.10 132 236 2.1E-42 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_25845 a9d3f7edb1f0d35eaaa376f0fb4de1f5 236 SMART SM00448 3 113 4.2E-48 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_25845 a9d3f7edb1f0d35eaaa376f0fb4de1f5 236 SUPERFAMILY SSF46894 131 231 2.27E-32 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_25845 a9d3f7edb1f0d35eaaa376f0fb4de1f5 236 Pfam PF00072 Response regulator receiver domain 5 114 2.2E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_25845 a9d3f7edb1f0d35eaaa376f0fb4de1f5 236 SUPERFAMILY SSF52172 2 125 2.13E-44 T 12-10-2018 IPR011006 CheY-like superfamily N288_10110 d3cbadc537f166502d933e1cbbd35456 87 Pfam PF11588 Protein of unknown function (DUF3243) 3 80 5.2E-36 T 12-10-2018 IPR021637 Protein of unknown function DUF3243 N288_10110 d3cbadc537f166502d933e1cbbd35456 87 PIRSF PIRSF004764 1 85 5.4E-28 T 12-10-2018 IPR024702 Uncharacterised conserved protein YmfJ N288_10110 d3cbadc537f166502d933e1cbbd35456 87 Gene3D G3DSA:1.10.760.20 1 82 3.9E-32 T 12-10-2018 IPR038292 YmfJ/YflH superfamily N288_11705 cd1d7bfd5e190843bc239d41afe1f9d1 43 Pfam PF13040 Fur-regulated basic protein B 2 39 2.5E-17 T 12-10-2018 IPR025004 Transcriptional regulatory protein SenN/SenS N288_23770 93b3dbfe91d0994583b615ad7544a719 234 SUPERFAMILY SSF88659 157 218 5.42E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_23770 93b3dbfe91d0994583b615ad7544a719 234 Gene3D G3DSA:1.10.1740.10 50 133 4.6E-19 T 12-10-2018 N288_23770 93b3dbfe91d0994583b615ad7544a719 234 Gene3D G3DSA:1.10.10.10 151 224 1.9E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_23770 93b3dbfe91d0994583b615ad7544a719 234 TIGRFAM TIGR02950 SigM_subfam: RNA polymerase sigma factor, SigM family 62 219 2.7E-50 T 12-10-2018 IPR014296 RNA polymerase sigma-M, bacillaceae GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_23770 93b3dbfe91d0994583b615ad7544a719 234 Pfam PF08281 Sigma-70, region 4 168 217 9.6E-16 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_23770 93b3dbfe91d0994583b615ad7544a719 234 SUPERFAMILY SSF88946 58 141 1.73E-18 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_23770 93b3dbfe91d0994583b615ad7544a719 234 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 60 218 1.1E-26 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_23770 93b3dbfe91d0994583b615ad7544a719 234 Pfam PF04542 Sigma-70 region 2 65 132 1.6E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_15655 8e4a08d7e026eca5bbe8f9a4bf77b849 254 Gene3D G3DSA:3.40.50.1820 3 248 1.9E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_15655 8e4a08d7e026eca5bbe8f9a4bf77b849 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 3.6E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_15655 8e4a08d7e026eca5bbe8f9a4bf77b849 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 3.6E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_15655 8e4a08d7e026eca5bbe8f9a4bf77b849 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 88 101 3.6E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_15655 8e4a08d7e026eca5bbe8f9a4bf77b849 254 SUPERFAMILY SSF53474 4 248 2.14E-46 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_15655 8e4a08d7e026eca5bbe8f9a4bf77b849 254 Pfam PF12146 Serine aminopeptidase, S33 45 226 5.0E-16 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 N288_18915 f4278a5b3d6d528583a0b66149beb007 174 Pfam PF08955 BofC C-terminal domain 93 165 2.9E-30 T 12-10-2018 IPR015050 Bypass of forespore C, C-terminal N288_18915 f4278a5b3d6d528583a0b66149beb007 174 Gene3D G3DSA:3.30.70.1740 93 169 3.8E-32 T 12-10-2018 IPR038117 Bypass of forespore C, C-terminal domain superfamily N288_18915 f4278a5b3d6d528583a0b66149beb007 174 Gene3D G3DSA:3.10.20.420 38 92 4.2E-27 T 12-10-2018 IPR038118 Bypass-of-forespore C, N-terminal domain superfamily N288_18915 f4278a5b3d6d528583a0b66149beb007 174 Pfam PF08977 Bypass of Forespore C, N terminal 42 91 2.1E-26 T 12-10-2018 IPR015071 Bypass-of-forespore C, N-terminal N288_19220 60d42fff8c70c62810d4e5fb10a6f78b 215 Gene3D G3DSA:1.10.3720.10 5 213 3.5E-58 T 12-10-2018 IPR035906 MetI-like superfamily N288_19220 60d42fff8c70c62810d4e5fb10a6f78b 215 SUPERFAMILY SSF161098 12 203 6.54E-45 T 12-10-2018 IPR035906 MetI-like superfamily N288_19220 60d42fff8c70c62810d4e5fb10a6f78b 215 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 106 1.4E-26 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 N288_19220 60d42fff8c70c62810d4e5fb10a6f78b 215 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 212 1.4E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_17635 daa64833ec4dedbaa72e724cb30f6eb2 432 Hamap MF_01113 DNA polymerase IV [dinB]. 9 361 38.408 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 N288_17635 daa64833ec4dedbaa72e724cb30f6eb2 432 Pfam PF00817 impB/mucB/samB family 15 162 2.4E-51 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 N288_17635 daa64833ec4dedbaa72e724cb30f6eb2 432 SUPERFAMILY SSF56672 6 242 1.33E-83 T 12-10-2018 N288_17635 daa64833ec4dedbaa72e724cb30f6eb2 432 Pfam PF11799 impB/mucB/samB family C-terminal domain 250 354 6.3E-21 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 N288_17635 daa64833ec4dedbaa72e724cb30f6eb2 432 Gene3D G3DSA:2.30.40.20 29 82 4.4E-61 T 12-10-2018 N288_17635 daa64833ec4dedbaa72e724cb30f6eb2 432 Gene3D G3DSA:3.30.70.270 12 172 4.4E-61 T 12-10-2018 N288_17635 daa64833ec4dedbaa72e724cb30f6eb2 432 Gene3D G3DSA:3.30.1490.100 251 358 4.9E-23 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 N288_17635 daa64833ec4dedbaa72e724cb30f6eb2 432 Pfam PF11798 IMS family HHH motif 179 205 1.7E-5 T 12-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 N288_17635 daa64833ec4dedbaa72e724cb30f6eb2 432 Gene3D G3DSA:1.10.150.20 177 243 1.0E-13 T 12-10-2018 N288_17635 daa64833ec4dedbaa72e724cb30f6eb2 432 SUPERFAMILY SSF100879 249 346 1.12E-23 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 N288_01510 f8f1297963c27868e190704da7fafc98 392 SUPERFAMILY SSF50621 243 381 1.4E-49 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 N288_01510 f8f1297963c27868e190704da7fafc98 392 PRINTS PR00992 Alanine racemase signature 131 143 5.7E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 N288_01510 f8f1297963c27868e190704da7fafc98 392 PRINTS PR00992 Alanine racemase signature 206 233 5.7E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 N288_01510 f8f1297963c27868e190704da7fafc98 392 PRINTS PR00992 Alanine racemase signature 36 52 5.7E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 N288_01510 f8f1297963c27868e190704da7fafc98 392 PRINTS PR00992 Alanine racemase signature 72 90 5.7E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 N288_01510 f8f1297963c27868e190704da7fafc98 392 PRINTS PR00992 Alanine racemase signature 281 296 5.7E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 N288_01510 f8f1297963c27868e190704da7fafc98 392 PRINTS PR00992 Alanine racemase signature 166 177 5.7E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 N288_01510 f8f1297963c27868e190704da7fafc98 392 PRINTS PR00992 Alanine racemase signature 264 279 5.7E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 N288_01510 f8f1297963c27868e190704da7fafc98 392 PRINTS PR00992 Alanine racemase signature 301 318 5.7E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 N288_01510 f8f1297963c27868e190704da7fafc98 392 PRINTS PR00992 Alanine racemase signature 355 368 5.7E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 N288_01510 f8f1297963c27868e190704da7fafc98 392 SMART SM01005 248 373 2.9E-67 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 N288_01510 f8f1297963c27868e190704da7fafc98 392 Hamap MF_01201 Alanine racemase. 10 373 35.197 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 N288_01510 f8f1297963c27868e190704da7fafc98 392 TIGRFAM TIGR00492 alr: alanine racemase 11 372 6.5E-122 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 N288_01510 f8f1297963c27868e190704da7fafc98 392 Gene3D G3DSA:2.40.37.10 17 370 1.9E-129 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 N288_01510 f8f1297963c27868e190704da7fafc98 392 SUPERFAMILY SSF51419 17 246 5.56E-64 T 12-10-2018 IPR029066 PLP-binding barrel N288_01510 f8f1297963c27868e190704da7fafc98 392 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 41 51 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 N288_01510 f8f1297963c27868e190704da7fafc98 392 Gene3D G3DSA:3.20.20.10 19 238 1.9E-129 T 12-10-2018 IPR029066 PLP-binding barrel N288_01510 f8f1297963c27868e190704da7fafc98 392 Pfam PF00842 Alanine racemase, C-terminal domain 249 372 2.7E-45 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 N288_01510 f8f1297963c27868e190704da7fafc98 392 Pfam PF01168 Alanine racemase, N-terminal domain 17 233 3.0E-66 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 N288_21690 c0a2caad33309fa211b802a45aa0b19f 243 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 4 240 37.354 T 12-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 N288_21690 c0a2caad33309fa211b802a45aa0b19f 243 SUPERFAMILY SSF51366 4 239 1.65E-72 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 N288_21690 c0a2caad33309fa211b802a45aa0b19f 243 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 5 236 4.2E-86 T 12-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 N288_21690 c0a2caad33309fa211b802a45aa0b19f 243 Pfam PF00977 Histidine biosynthesis protein 5 233 3.7E-79 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 N288_21690 c0a2caad33309fa211b802a45aa0b19f 243 Gene3D G3DSA:3.20.20.70 1 243 1.2E-90 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_07180 e6b85f573b357592c19c71393a92d068 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 245 3.8E-94 T 12-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 N288_07180 e6b85f573b357592c19c71393a92d068 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 185 4.2E-6 T 12-10-2018 N288_07180 e6b85f573b357592c19c71393a92d068 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 2.0E-77 T 12-10-2018 N288_07180 e6b85f573b357592c19c71393a92d068 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.6E-50 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07180 e6b85f573b357592c19c71393a92d068 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.6E-50 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07180 e6b85f573b357592c19c71393a92d068 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.6E-50 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07180 e6b85f573b357592c19c71393a92d068 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.6E-50 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07180 e6b85f573b357592c19c71393a92d068 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.6E-50 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07180 e6b85f573b357592c19c71393a92d068 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.6E-50 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07180 e6b85f573b357592c19c71393a92d068 246 Gene3D G3DSA:3.40.50.720 1 246 1.9E-94 T 12-10-2018 N288_07180 e6b85f573b357592c19c71393a92d068 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_07180 e6b85f573b357592c19c71393a92d068 246 SUPERFAMILY SSF51735 4 246 8.17E-95 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_07180 e6b85f573b357592c19c71393a92d068 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.7E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07180 e6b85f573b357592c19c71393a92d068 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.7E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_07180 e6b85f573b357592c19c71393a92d068 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.7E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_14280 c496dfe674aa935acd517e8af5d60405 332 Gene3D G3DSA:1.20.1260.10 173 317 1.0E-6 T 12-10-2018 IPR012347 Ferritin-like N288_14280 c496dfe674aa935acd517e8af5d60405 332 Gene3D G3DSA:1.20.1260.10 2 146 3.7E-9 T 12-10-2018 IPR012347 Ferritin-like N288_14280 c496dfe674aa935acd517e8af5d60405 332 Pfam PF11553 Protein of unknown function (DUF3231) 3 155 4.9E-44 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_14280 c496dfe674aa935acd517e8af5d60405 332 Pfam PF11553 Protein of unknown function (DUF3231) 168 330 4.4E-59 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_01420 6190d69b0c496f0d06178728ad37b70b 396 PRINTS PR00173 Glutamate-aspartate symporter signature 1 18 1.2E-5 T 12-10-2018 N288_01420 6190d69b0c496f0d06178728ad37b70b 396 PRINTS PR00173 Glutamate-aspartate symporter signature 307 326 1.2E-5 T 12-10-2018 N288_01420 6190d69b0c496f0d06178728ad37b70b 396 PRINTS PR00173 Glutamate-aspartate symporter signature 127 149 1.2E-5 T 12-10-2018 N288_01420 6190d69b0c496f0d06178728ad37b70b 396 PRINTS PR00173 Glutamate-aspartate symporter signature 272 298 1.2E-5 T 12-10-2018 N288_01420 6190d69b0c496f0d06178728ad37b70b 396 Gene3D G3DSA:1.10.3860.10 1 386 2.0E-50 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 N288_01420 6190d69b0c496f0d06178728ad37b70b 396 Pfam PF00375 Sodium:dicarboxylate symporter family 6 380 6.6E-80 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 N288_01420 6190d69b0c496f0d06178728ad37b70b 396 SUPERFAMILY SSF118215 6 380 7.59E-81 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 N288_06220 f058c2c61c05ca0478bf0eaa1ea15fce 512 Gene3D G3DSA:3.40.630.30 6 222 7.0E-61 T 12-10-2018 N288_06220 f058c2c61c05ca0478bf0eaa1ea15fce 512 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 374 394 - T 12-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site N288_06220 f058c2c61c05ca0478bf0eaa1ea15fce 512 SUPERFAMILY SSF55729 15 143 5.49E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_06220 f058c2c61c05ca0478bf0eaa1ea15fce 512 Pfam PF00583 Acetyltransferase (GNAT) family 25 144 1.2E-10 T 12-10-2018 IPR000182 GNAT domain N288_06220 f058c2c61c05ca0478bf0eaa1ea15fce 512 Pfam PF00795 Carbon-nitrogen hydrolase 232 489 6.2E-30 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 N288_06220 f058c2c61c05ca0478bf0eaa1ea15fce 512 SUPERFAMILY SSF56317 226 495 2.62E-58 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily N288_06220 f058c2c61c05ca0478bf0eaa1ea15fce 512 Gene3D G3DSA:3.60.110.10 225 512 6.0E-58 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily N288_15865 67c9b49c4906fc612d4a892464ac035c 165 Gene3D G3DSA:3.60.21.10 2 160 1.4E-39 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_15865 67c9b49c4906fc612d4a892464ac035c 165 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 153 2.8E-28 T 12-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 N288_15865 67c9b49c4906fc612d4a892464ac035c 165 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 3 152 2.8E-27 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 N288_15865 67c9b49c4906fc612d4a892464ac035c 165 SUPERFAMILY SSF56300 2 152 2.63E-32 T 12-10-2018 N288_01480 f8fba81ac8463acd8278ef44dde62687 320 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 4 304 1.1E-64 T 12-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 N288_01480 f8fba81ac8463acd8278ef44dde62687 320 Pfam PF03851 UV-endonuclease UvdE 6 276 1.5E-89 T 12-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 N288_01480 f8fba81ac8463acd8278ef44dde62687 320 Gene3D G3DSA:3.20.20.150 3 309 4.4E-94 T 12-10-2018 N288_01480 f8fba81ac8463acd8278ef44dde62687 320 SUPERFAMILY SSF51658 87 291 5.59E-14 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily N288_08715 b81aeb0e329fc7d49af42d428d4802a2 605 Pfam PF00664 ABC transporter transmembrane region 47 313 3.3E-44 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 N288_08715 b81aeb0e329fc7d49af42d428d4802a2 605 SMART SM00382 388 574 3.7E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_08715 b81aeb0e329fc7d49af42d428d4802a2 605 Pfam PF00005 ABC transporter 379 528 6.2E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_08715 b81aeb0e329fc7d49af42d428d4802a2 605 SUPERFAMILY SSF52540 352 599 1.3E-91 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_08715 b81aeb0e329fc7d49af42d428d4802a2 605 Gene3D G3DSA:1.20.1560.10 15 348 4.5E-90 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_08715 b81aeb0e329fc7d49af42d428d4802a2 605 Gene3D G3DSA:3.40.50.300 359 603 9.3E-93 T 12-10-2018 N288_08715 b81aeb0e329fc7d49af42d428d4802a2 605 ProSitePatterns PS00211 ABC transporters family signature. 500 514 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_08715 b81aeb0e329fc7d49af42d428d4802a2 605 SUPERFAMILY SSF90123 28 349 3.79E-78 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_19940 f2df5d6bd0020c6245567b9f2429271c 166 Pfam PF12732 YtxH-like protein 26 107 5.5E-19 T 12-10-2018 IPR024623 Uncharacterised protein family YtxH N288_14720 e9738e8ea0c02fb7f3f3785cd1a6b70d 223 Gene3D G3DSA:3.40.50.880 8 208 2.8E-40 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_14720 e9738e8ea0c02fb7f3f3785cd1a6b70d 223 SUPERFAMILY SSF52317 10 193 6.87E-30 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_14720 e9738e8ea0c02fb7f3f3785cd1a6b70d 223 Pfam PF03575 Peptidase family S51 2 185 5.5E-51 T 12-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 N288_20745 c408803ce2917270c42c384dff5e6607 682 Pfam PF00905 Penicillin binding protein transpeptidase domain 412 657 1.1E-25 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 N288_20745 c408803ce2917270c42c384dff5e6607 682 SUPERFAMILY SSF53955 125 333 5.62E-69 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily N288_20745 c408803ce2917270c42c384dff5e6607 682 SUPERFAMILY SSF56601 293 681 1.06E-95 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_20745 c408803ce2917270c42c384dff5e6607 682 Gene3D G3DSA:1.10.3810.10 129 326 2.2E-68 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_20745 c408803ce2917270c42c384dff5e6607 682 Gene3D G3DSA:3.40.710.10 347 681 3.4E-93 T 12-10-2018 N288_20745 c408803ce2917270c42c384dff5e6607 682 Pfam PF00912 Transglycosylase 136 309 3.4E-59 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_01900 8bd9b389292002fecfb26da6a0e2f195 182 Gene3D G3DSA:3.40.50.850 1 181 1.5E-53 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 N288_01900 8bd9b389292002fecfb26da6a0e2f195 182 SUPERFAMILY SSF52499 2 180 9.68E-46 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 N288_01900 8bd9b389292002fecfb26da6a0e2f195 182 Pfam PF00857 Isochorismatase family 3 174 5.3E-34 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 N288_20960 47d82fc8ab80c177b7797a565acbf647 109 PIRSF PIRSF010603 2 107 1.9E-43 T 12-10-2018 IPR009190 Protein of unknown function DUF1462 N288_20960 47d82fc8ab80c177b7797a565acbf647 109 Pfam PF07315 Protein of unknown function (DUF1462) 9 101 2.8E-42 T 12-10-2018 IPR009190 Protein of unknown function DUF1462 N288_20960 47d82fc8ab80c177b7797a565acbf647 109 Gene3D G3DSA:3.40.30.30 1 104 5.5E-41 T 12-10-2018 IPR038218 YuzD-like superfamily N288_20960 47d82fc8ab80c177b7797a565acbf647 109 SUPERFAMILY SSF52833 3 106 1.34E-45 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_25825 b97c1312e2a3e396e8bb72d80405ce9e 264 SUPERFAMILY SSF56281 1 230 1.44E-41 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_25825 b97c1312e2a3e396e8bb72d80405ce9e 264 Gene3D G3DSA:3.60.15.10 8 249 3.0E-41 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_25825 b97c1312e2a3e396e8bb72d80405ce9e 264 Pfam PF00753 Metallo-beta-lactamase superfamily 12 218 2.5E-21 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_25825 b97c1312e2a3e396e8bb72d80405ce9e 264 SMART SM00849 13 218 5.4E-12 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_25205 275ff4fda7da9a0c9c4e7af6f0bc553c 153 Gene3D G3DSA:2.30.30.840 1 62 2.7E-26 T 12-10-2018 N288_25205 275ff4fda7da9a0c9c4e7af6f0bc553c 153 Pfam PF02559 CarD-like/TRCF domain 2 110 5.7E-18 T 12-10-2018 IPR003711 CarD-like/TRCF domain N288_25205 275ff4fda7da9a0c9c4e7af6f0bc553c 153 Gene3D G3DSA:1.20.58.1290 63 153 2.0E-27 T 12-10-2018 N288_25205 275ff4fda7da9a0c9c4e7af6f0bc553c 153 SUPERFAMILY SSF141259 2 59 2.22E-12 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily N288_25205 275ff4fda7da9a0c9c4e7af6f0bc553c 153 SMART SM01058 1 111 6.2E-28 T 12-10-2018 IPR003711 CarD-like/TRCF domain N288_18830 7823594741f93ea47b959dd836af5446 146 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 4.3E-61 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 N288_18830 7823594741f93ea47b959dd836af5446 146 Gene3D G3DSA:3.50.80.10 1 146 3.4E-59 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily N288_18830 7823594741f93ea47b959dd836af5446 146 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 6.8E-57 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 N288_18830 7823594741f93ea47b959dd836af5446 146 SUPERFAMILY SSF69500 1 144 1.7E-58 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily N288_18830 7823594741f93ea47b959dd836af5446 146 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 35.681 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 N288_16450 07c2583d81dc9150b28fc2af0fa71706 376 Gene3D G3DSA:1.25.10.10 193 375 5.4E-25 T 12-10-2018 IPR011989 Armadillo-like helical N288_16450 07c2583d81dc9150b28fc2af0fa71706 376 SMART SM00932 4 90 1.2E-27 T 12-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal N288_16450 07c2583d81dc9150b28fc2af0fa71706 376 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 6 87 4.2E-19 T 12-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal N288_16450 07c2583d81dc9150b28fc2af0fa71706 376 SUPERFAMILY SSF48371 213 371 4.34E-32 T 12-10-2018 IPR016024 Armadillo-type fold N288_16450 07c2583d81dc9150b28fc2af0fa71706 376 SMART SM00567 E-Z type HEAT repeats 248 277 0.032 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 N288_16450 07c2583d81dc9150b28fc2af0fa71706 376 SMART SM00567 E-Z type HEAT repeats 310 339 0.18 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 N288_16450 07c2583d81dc9150b28fc2af0fa71706 376 SMART SM00567 E-Z type HEAT repeats 218 246 470.0 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 N288_16450 07c2583d81dc9150b28fc2af0fa71706 376 SMART SM00567 E-Z type HEAT repeats 279 308 1.6 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 N288_16450 07c2583d81dc9150b28fc2af0fa71706 376 Pfam PF13769 Virulence factor 108 188 1.1E-31 T 12-10-2018 IPR025989 Virulence factor domain N288_16450 07c2583d81dc9150b28fc2af0fa71706 376 Pfam PF13646 HEAT repeats 267 342 2.4E-11 T 12-10-2018 N288_16450 07c2583d81dc9150b28fc2af0fa71706 376 Gene3D G3DSA:3.30.1370.70 1 90 2.4E-27 T 12-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily N288_16450 07c2583d81dc9150b28fc2af0fa71706 376 SUPERFAMILY SSF110836 2 87 4.71E-22 T 12-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily N288_08415 3c0a61e05059d143553b9e340721fbd8 137 SUPERFAMILY SSF54593 4 128 6.18E-26 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_08415 3c0a61e05059d143553b9e340721fbd8 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 115 1.6E-11 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_08415 3c0a61e05059d143553b9e340721fbd8 137 Gene3D G3DSA:3.10.180.10 1 134 4.8E-36 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_17475 b3184ebd9dbd0b11101c2f12a6f0d39a 154 Gene3D G3DSA:1.10.10.10 1 88 3.9E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_17475 b3184ebd9dbd0b11101c2f12a6f0d39a 154 Gene3D G3DSA:3.30.1490.190 93 150 3.3E-17 T 12-10-2018 N288_17475 b3184ebd9dbd0b11101c2f12a6f0d39a 154 SUPERFAMILY SSF46785 7 140 5.44E-39 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_17475 b3184ebd9dbd0b11101c2f12a6f0d39a 154 Pfam PF01475 Ferric uptake regulator family 15 136 1.6E-40 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 N288_10210 5cbf56c452145a856c91e80b79710494 179 SMART SM00530 5 60 2.2E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_10210 5cbf56c452145a856c91e80b79710494 179 Pfam PF01381 Helix-turn-helix 8 58 1.8E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_10210 5cbf56c452145a856c91e80b79710494 179 Gene3D G3DSA:1.10.260.40 5 67 2.3E-14 T 12-10-2018 N288_10210 5cbf56c452145a856c91e80b79710494 179 SUPERFAMILY SSF47413 5 65 2.95E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_08245 4d6228eaa18e3e4ac52e6311c28e4107 405 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 6 404 8.1E-146 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 N288_08245 4d6228eaa18e3e4ac52e6311c28e4107 405 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 9 81 7.3E-25 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 N288_08245 4d6228eaa18e3e4ac52e6311c28e4107 405 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 196 404 2.5E-75 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 N288_08245 4d6228eaa18e3e4ac52e6311c28e4107 405 Pfam PF07670 Nucleoside recognition 94 186 2.2E-7 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 N288_20095 742274305a03bc3af1f9ac474114926f 431 SUPERFAMILY SSF48403 307 427 6.06E-35 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily N288_20095 742274305a03bc3af1f9ac474114926f 431 Gene3D G3DSA:3.30.2010.10 69 147 5.0E-9 T 12-10-2018 N288_20095 742274305a03bc3af1f9ac474114926f 431 PIRSF PIRSF000654 295 409 2.0E-14 T 12-10-2018 N288_20095 742274305a03bc3af1f9ac474114926f 431 PIRSF PIRSF000654 358 429 2.4E-6 T 12-10-2018 N288_20095 742274305a03bc3af1f9ac474114926f 431 Pfam PF01435 Peptidase family M48 163 245 6.5E-5 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 N288_20095 742274305a03bc3af1f9ac474114926f 431 SMART SM00248 340 369 1.2E-5 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 N288_20095 742274305a03bc3af1f9ac474114926f 431 SMART SM00248 373 402 0.044 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 N288_20095 742274305a03bc3af1f9ac474114926f 431 SMART SM00248 307 336 7.3 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 N288_20095 742274305a03bc3af1f9ac474114926f 431 Gene3D G3DSA:1.25.40.20 287 430 4.9E-37 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily N288_20095 742274305a03bc3af1f9ac474114926f 431 Pfam PF01435 Peptidase family M48 72 154 7.0E-13 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 N288_20095 742274305a03bc3af1f9ac474114926f 431 Pfam PF12796 Ankyrin repeats (3 copies) 312 403 6.9E-14 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain N288_06530 84f9bea165b244ac7affe145b21f006c 713 Pfam PF08279 HTH domain 27 64 6.9E-7 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 N288_06530 84f9bea165b244ac7affe145b21f006c 713 Pfam PF05043 Mga helix-turn-helix domain 111 186 5.4E-7 T 12-10-2018 IPR007737 Mga helix-turn-helix domain N288_06530 84f9bea165b244ac7affe145b21f006c 713 SUPERFAMILY SSF52794 430 500 4.18E-10 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 N288_06530 84f9bea165b244ac7affe145b21f006c 713 Gene3D G3DSA:3.40.930.10 548 701 8.5E-15 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 N288_06530 84f9bea165b244ac7affe145b21f006c 713 Pfam PF00874 PRD domain 330 417 4.6E-19 T 12-10-2018 IPR011608 PRD domain GO:0006355 N288_06530 84f9bea165b244ac7affe145b21f006c 713 Gene3D G3DSA:1.10.10.10 16 169 3.3E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_06530 84f9bea165b244ac7affe145b21f006c 713 SUPERFAMILY SSF55804 552 700 3.4E-19 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 N288_06530 84f9bea165b244ac7affe145b21f006c 713 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 430 488 2.9E-7 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 N288_06530 84f9bea165b244ac7affe145b21f006c 713 Gene3D G3DSA:1.10.1790.10 324 419 2.7E-18 T 12-10-2018 N288_06530 84f9bea165b244ac7affe145b21f006c 713 Gene3D G3DSA:3.40.50.2300 428 513 7.5E-12 T 12-10-2018 N288_06530 84f9bea165b244ac7affe145b21f006c 713 SUPERFAMILY SSF63520 327 419 3.14E-19 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 N288_06530 84f9bea165b244ac7affe145b21f006c 713 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 565 700 1.3E-14 T 12-10-2018 IPR002178 PTS EIIA type-2 domain N288_00365 267c304fae431dcf264f7c4731078a39 533 PIRSF PIRSF038958 5 523 5.5E-75 T 12-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type N288_00365 267c304fae431dcf264f7c4731078a39 533 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 362 505 1.2E-18 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain N288_00365 267c304fae431dcf264f7c4731078a39 533 Pfam PF01943 Polysaccharide biosynthesis protein 11 309 2.1E-39 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 N288_15530 166ef721070de294ef405a84d033ce02 571 SUPERFAMILY SSF52540 322 569 7.43E-94 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_15530 166ef721070de294ef405a84d033ce02 571 Pfam PF00005 ABC transporter 349 498 9.6E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_15530 166ef721070de294ef405a84d033ce02 571 SUPERFAMILY SSF90123 3 319 4.58E-81 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_15530 166ef721070de294ef405a84d033ce02 571 Gene3D G3DSA:3.40.50.300 329 571 1.7E-92 T 12-10-2018 N288_15530 166ef721070de294ef405a84d033ce02 571 SMART SM00382 358 544 2.8E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_15530 166ef721070de294ef405a84d033ce02 571 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_15530 166ef721070de294ef405a84d033ce02 571 Pfam PF00664 ABC transporter transmembrane region 20 286 1.8E-53 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 N288_15530 166ef721070de294ef405a84d033ce02 571 Gene3D G3DSA:1.20.1560.10 1 315 2.1E-84 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_08965 81a71696ce4686e8114fbbaa20f6c77a 209 Gene3D G3DSA:1.20.120.80 21 208 5.4E-50 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08965 81a71696ce4686e8114fbbaa20f6c77a 209 SUPERFAMILY SSF81452 22 206 3.4E-53 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08965 81a71696ce4686e8114fbbaa20f6c77a 209 Pfam PF00510 Cytochrome c oxidase subunit III 28 206 9.6E-17 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_11775 9d32e0f2eb7b2af54e316a2c0630eefa 478 Gene3D G3DSA:3.30.870.10 266 446 5.6E-22 T 12-10-2018 N288_11775 9d32e0f2eb7b2af54e316a2c0630eefa 478 SUPERFAMILY SSF56024 66 288 5.23E-12 T 12-10-2018 N288_11775 9d32e0f2eb7b2af54e316a2c0630eefa 478 Pfam PF13091 PLD-like domain 299 442 6.0E-22 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 N288_11775 9d32e0f2eb7b2af54e316a2c0630eefa 478 SUPERFAMILY SSF56024 292 470 6.28E-19 T 12-10-2018 N288_24130 f3963f13431670da10b8c3c37f592a6c 303 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_24130 f3963f13431670da10b8c3c37f592a6c 303 SMART SM00382 30 223 1.5E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_24130 f3963f13431670da10b8c3c37f592a6c 303 Gene3D G3DSA:3.40.50.300 2 239 4.8E-59 T 12-10-2018 N288_24130 f3963f13431670da10b8c3c37f592a6c 303 Pfam PF00005 ABC transporter 22 161 1.2E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_24130 f3963f13431670da10b8c3c37f592a6c 303 SUPERFAMILY SSF52540 3 227 3.32E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_17380 d39155b10b671f1685200a7aec6ee9ec 173 Pfam PF03745 Domain of unknown function (DUF309) 7 65 1.7E-21 T 12-10-2018 IPR005500 Protein of unknown function DUF309 N288_17380 d39155b10b671f1685200a7aec6ee9ec 173 SUPERFAMILY SSF140663 1 125 5.49E-33 T 12-10-2018 IPR023203 TTHA0068-like superfamily N288_17380 d39155b10b671f1685200a7aec6ee9ec 173 Gene3D G3DSA:1.20.58.500 3 96 3.1E-15 T 12-10-2018 N288_12305 a788adf67d06ddc90eb67291efa21b10 81 ProDom PD059670 UPF0180 YKUS BA1413/GBAA1413/BAS1304 YKUS-LIKE BT9727_1277 BCE1513 GK1051 BH2667 ABC2430 BCE33L1278 1 48 3.0E-11 T 12-10-2018 IPR005370 Uncharacterised protein family UPF0180 N288_12305 a788adf67d06ddc90eb67291efa21b10 81 Pfam PF03698 Uncharacterised protein family (UPF0180) 3 79 1.3E-31 T 12-10-2018 IPR005370 Uncharacterised protein family UPF0180 N288_12305 a788adf67d06ddc90eb67291efa21b10 81 Hamap MF_00506 UPF0180 protein . 2 80 25.948 T 12-10-2018 IPR005370 Uncharacterised protein family UPF0180 N288_01795 9619d4cf847afcb7b952b9a6a290b84d 152 SUPERFAMILY SSF55811 3 129 1.49E-20 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_01795 9619d4cf847afcb7b952b9a6a290b84d 152 Gene3D G3DSA:3.90.79.10 1 142 6.9E-26 T 12-10-2018 N288_01795 9619d4cf847afcb7b952b9a6a290b84d 152 Pfam PF00293 NUDIX domain 10 122 1.2E-12 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_23145 020ee0fd7c05c7b5f3a7ac87cb4806eb 596 Pfam PF00350 Dynamin family 57 214 1.5E-20 T 12-10-2018 IPR022812 Dynamin superfamily N288_23145 020ee0fd7c05c7b5f3a7ac87cb4806eb 596 Gene3D G3DSA:3.40.50.300 57 295 2.8E-33 T 12-10-2018 N288_23145 020ee0fd7c05c7b5f3a7ac87cb4806eb 596 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 54 247 2.4E-12 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 N288_23145 020ee0fd7c05c7b5f3a7ac87cb4806eb 596 SUPERFAMILY SSF52540 33 278 3.75E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_18365 1f1bd218c6e69a0c5ba57704585debad 211 Pfam PF08279 HTH domain 10 62 2.1E-11 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 N288_18365 1f1bd218c6e69a0c5ba57704585debad 211 PIRSF PIRSF026546 5 211 9.1E-99 T 12-10-2018 IPR016842 Protein of unknown function UCP026546, HtH-CBS N288_18365 1f1bd218c6e69a0c5ba57704585debad 211 Pfam PF00571 CBS domain 82 134 7.4E-6 T 12-10-2018 IPR000644 CBS domain N288_18365 1f1bd218c6e69a0c5ba57704585debad 211 Pfam PF00571 CBS domain 148 204 2.1E-6 T 12-10-2018 IPR000644 CBS domain N288_18365 1f1bd218c6e69a0c5ba57704585debad 211 Gene3D G3DSA:3.10.580.10 65 211 1.2E-58 T 12-10-2018 N288_18365 1f1bd218c6e69a0c5ba57704585debad 211 SUPERFAMILY SSF46785 6 75 8.17E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_18365 1f1bd218c6e69a0c5ba57704585debad 211 SUPERFAMILY SSF54631 71 205 3.79E-23 T 12-10-2018 N288_18365 1f1bd218c6e69a0c5ba57704585debad 211 Gene3D G3DSA:1.10.10.10 2 64 7.1E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_18365 1f1bd218c6e69a0c5ba57704585debad 211 SMART SM00116 154 205 4.1E-4 T 12-10-2018 IPR000644 CBS domain N288_18365 1f1bd218c6e69a0c5ba57704585debad 211 SMART SM00116 87 135 0.046 T 12-10-2018 IPR000644 CBS domain N288_22100 11fcae52e3b0c33082e789eec5800f00 255 Pfam PF02645 Uncharacterised protein, DegV family COG1307 1 254 2.3E-90 T 12-10-2018 IPR003797 DegV N288_22100 11fcae52e3b0c33082e789eec5800f00 255 SUPERFAMILY SSF82549 1 255 8.37E-88 T 12-10-2018 N288_22100 11fcae52e3b0c33082e789eec5800f00 255 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 1 253 5.6E-97 T 12-10-2018 IPR003797 DegV N288_22100 11fcae52e3b0c33082e789eec5800f00 255 Gene3D G3DSA:3.40.50.10170 1 126 2.5E-44 T 12-10-2018 N288_22100 11fcae52e3b0c33082e789eec5800f00 255 Gene3D G3DSA:3.30.1180.10 127 255 9.6E-46 T 12-10-2018 N288_09935 ccce93b84defe30007229afd3a401ec1 95 Gene3D G3DSA:3.30.1230.10 3 95 6.2E-35 T 12-10-2018 IPR035931 YlxR-like superfamily N288_09935 ccce93b84defe30007229afd3a401ec1 95 Pfam PF04296 Protein of unknown function (DUF448) 12 84 3.3E-26 T 12-10-2018 IPR007393 Domain of unknown function DUF448 N288_09935 ccce93b84defe30007229afd3a401ec1 95 SUPERFAMILY SSF64376 7 90 3.01E-27 T 12-10-2018 IPR035931 YlxR-like superfamily N288_11235 fe200ecd6a632294f2a2604c34947b45 458 Gene3D G3DSA:3.40.630.10 13 446 2.7E-174 T 12-10-2018 N288_11235 fe200ecd6a632294f2a2604c34947b45 458 SUPERFAMILY SSF53187 1 454 3.28E-67 T 12-10-2018 N288_11235 fe200ecd6a632294f2a2604c34947b45 458 Pfam PF01546 Peptidase family M20/M25/M40 83 450 1.7E-39 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_11235 fe200ecd6a632294f2a2604c34947b45 458 SUPERFAMILY SSF55031 198 362 1.67E-5 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_11235 fe200ecd6a632294f2a2604c34947b45 458 Gene3D G3DSA:3.30.70.360 197 367 2.7E-174 T 12-10-2018 N288_11235 fe200ecd6a632294f2a2604c34947b45 458 Pfam PF07687 Peptidase dimerisation domain 194 354 1.2E-26 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain N288_22235 761abbd182b1c8494c1b8569f6545439 154 SUPERFAMILY SSF54427 39 151 2.74E-9 T 12-10-2018 IPR032710 NTF2-like domain superfamily N288_19170 bc09605b951dfb93c15e40297a89e97c 356 Gene3D G3DSA:3.90.1200.10 98 328 2.6E-16 T 12-10-2018 N288_19170 bc09605b951dfb93c15e40297a89e97c 356 Pfam PF02958 Ecdysteroid kinase 95 267 5.1E-5 T 12-10-2018 IPR004119 Protein of unknown function DUF227 N288_19170 bc09605b951dfb93c15e40297a89e97c 356 TIGRFAM TIGR02904 spore_ysxE: spore coat protein YsxE 11 315 1.5E-134 T 12-10-2018 IPR014253 Spore coat protein YsxE N288_19170 bc09605b951dfb93c15e40297a89e97c 356 SUPERFAMILY SSF56112 16 319 2.48E-12 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_19170 bc09605b951dfb93c15e40297a89e97c 356 Gene3D G3DSA:3.30.200.20 3 94 7.1E-11 T 12-10-2018 N288_19255 f5bfabd6df6438e64be2072cd80f67e3 341 Pfam PF14559 Tetratricopeptide repeat 33 78 7.3E-7 T 12-10-2018 N288_19255 f5bfabd6df6438e64be2072cd80f67e3 341 SUPERFAMILY SSF116965 109 294 2.22E-7 T 12-10-2018 N288_19255 f5bfabd6df6438e64be2072cd80f67e3 341 SUPERFAMILY SSF48452 17 121 1.14E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_19255 f5bfabd6df6438e64be2072cd80f67e3 341 Gene3D G3DSA:1.25.40.10 19 90 2.4E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_24035 4ce801b8b459148078e18c9f99750472 259 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 2 77 4.2E-43 T 12-10-2018 IPR014243 Transcription factor, RsfA N288_07110 f34cbeb7c6b45772059c549c7a015bca 313 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 86 229 7.3E-47 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain N288_07110 f34cbeb7c6b45772059c549c7a015bca 313 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 85 230 4.4E-32 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain N288_07110 f34cbeb7c6b45772059c549c7a015bca 313 Gene3D G3DSA:1.10.260.150 65 313 4.8E-79 T 12-10-2018 N288_05340 44b40fbdcd63d8fdab0387f708034008 201 Gene3D G3DSA:3.40.50.150 28 164 4.3E-12 T 12-10-2018 N288_05340 44b40fbdcd63d8fdab0387f708034008 201 SUPERFAMILY SSF53335 25 95 7.08E-13 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_09075 9c06c69f07d34a8e174d5a570983f24c 340 Pfam PF13180 PDZ domain 128 196 3.8E-17 T 12-10-2018 IPR001478 PDZ domain GO:0005515 N288_09075 9c06c69f07d34a8e174d5a570983f24c 340 Gene3D G3DSA:2.30.42.10 129 214 1.5E-28 T 12-10-2018 N288_09075 9c06c69f07d34a8e174d5a570983f24c 340 SUPERFAMILY SSF54211 229 334 1.59E-20 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_09075 9c06c69f07d34a8e174d5a570983f24c 340 SMART SM00228 118 187 2.2E-5 T 12-10-2018 IPR001478 PDZ domain GO:0005515 N288_09075 9c06c69f07d34a8e174d5a570983f24c 340 Gene3D G3DSA:3.30.230.10 215 340 8.0E-9 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup N288_09075 9c06c69f07d34a8e174d5a570983f24c 340 SUPERFAMILY SSF50156 129 214 2.63E-17 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 N288_09075 9c06c69f07d34a8e174d5a570983f24c 340 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 193 331 5.1E-10 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 N288_03215 f48d84baa4cc47ac3e1c8328c90a0941 845 ProSitePatterns PS00129 Glycosyl hydrolases family 31 active site. 425 432 - T 12-10-2018 IPR030458 Glycosyl hydrolases family 31, active site N288_03215 f48d84baa4cc47ac3e1c8328c90a0941 845 Pfam PF13802 Galactose mutarotase-like 171 237 1.3E-18 T 12-10-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain N288_03215 f48d84baa4cc47ac3e1c8328c90a0941 845 SUPERFAMILY SSF51445 268 619 2.74E-81 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_03215 f48d84baa4cc47ac3e1c8328c90a0941 845 SUPERFAMILY SSF74650 37 265 2.45E-52 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 N288_03215 f48d84baa4cc47ac3e1c8328c90a0941 845 Gene3D G3DSA:2.60.40.1760 51 278 5.5E-54 T 12-10-2018 N288_03215 f48d84baa4cc47ac3e1c8328c90a0941 845 Gene3D G3DSA:3.20.20.80 448 629 4.6E-67 T 12-10-2018 N288_03215 f48d84baa4cc47ac3e1c8328c90a0941 845 Gene3D G3DSA:3.20.20.80 281 447 1.1E-56 T 12-10-2018 N288_03215 f48d84baa4cc47ac3e1c8328c90a0941 845 SUPERFAMILY SSF51011 621 701 6.33E-25 T 12-10-2018 N288_03215 f48d84baa4cc47ac3e1c8328c90a0941 845 Pfam PF17137 Domain of unknown function (DUF5110) 722 790 3.5E-13 T 12-10-2018 IPR033403 Domain of unknown function DUF5110 N288_03215 f48d84baa4cc47ac3e1c8328c90a0941 845 Gene3D G3DSA:2.60.40.1180 704 845 5.0E-27 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_03215 f48d84baa4cc47ac3e1c8328c90a0941 845 Gene3D G3DSA:2.60.40.1180 630 702 5.7E-31 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta N288_03215 f48d84baa4cc47ac3e1c8328c90a0941 845 Pfam PF01055 Glycosyl hydrolases family 31 259 706 3.2E-156 T 12-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 N288_03215 f48d84baa4cc47ac3e1c8328c90a0941 845 Pfam PF16338 Domain of unknown function (DUF4968) 58 148 6.0E-21 T 12-10-2018 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 N288_10240 eeadf0ae8342d78bad908abcaa2033d9 333 Gene3D G3DSA:3.40.50.300 24 302 3.0E-108 T 12-10-2018 N288_10240 eeadf0ae8342d78bad908abcaa2033d9 333 SUPERFAMILY SSF52540 19 279 6.83E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_10240 eeadf0ae8342d78bad908abcaa2033d9 333 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 20 324 31.233 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 N288_10240 eeadf0ae8342d78bad908abcaa2033d9 333 Gene3D G3DSA:1.10.20.140 127 199 3.0E-108 T 12-10-2018 N288_10240 eeadf0ae8342d78bad908abcaa2033d9 333 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 20 304 1.1E-115 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 N288_10240 eeadf0ae8342d78bad908abcaa2033d9 333 SUPERFAMILY SSF52540 20 165 8.43E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_10240 eeadf0ae8342d78bad908abcaa2033d9 333 Pfam PF01715 IPP transferase 53 298 4.7E-86 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 N288_19885 69e67187fd94c039c172f2793a66f57b 572 Pfam PF00501 AMP-binding enzyme 51 462 9.2E-91 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 N288_19885 69e67187fd94c039c172f2793a66f57b 572 Gene3D G3DSA:3.40.50.12780 16 455 3.3E-119 T 12-10-2018 N288_19885 69e67187fd94c039c172f2793a66f57b 572 Pfam PF13193 AMP-binding enzyme C-terminal domain 471 549 1.6E-25 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain N288_19885 69e67187fd94c039c172f2793a66f57b 572 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 12-10-2018 IPR020845 AMP-binding, conserved site N288_19885 69e67187fd94c039c172f2793a66f57b 572 Gene3D G3DSA:3.30.300.30 458 571 3.0E-28 T 12-10-2018 N288_19885 69e67187fd94c039c172f2793a66f57b 572 SUPERFAMILY SSF56801 12 562 3.53E-162 T 12-10-2018 N288_14920 db2db51c2e60f4abb8cef31af220a18c 225 Gene3D G3DSA:3.40.50.12740 2 214 4.8E-32 T 12-10-2018 N288_14920 db2db51c2e60f4abb8cef31af220a18c 225 SMART SM00448 2 115 1.8E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_14920 db2db51c2e60f4abb8cef31af220a18c 225 PIRSF PIRSF006171 1 225 4.7E-73 T 12-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 N288_14920 db2db51c2e60f4abb8cef31af220a18c 225 SUPERFAMILY SSF52172 1 127 8.68E-31 T 12-10-2018 IPR011006 CheY-like superfamily N288_14920 db2db51c2e60f4abb8cef31af220a18c 225 Pfam PF00072 Response regulator receiver domain 5 116 1.3E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_10610 59f3a21451e151dc5cd345d0be7a5613 376 PRINTS PR00344 Bacterial sensor protein C-terminal signature 295 309 5.8E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_10610 59f3a21451e151dc5cd345d0be7a5613 376 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 348 5.8E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_10610 59f3a21451e151dc5cd345d0be7a5613 376 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 323 5.8E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_10610 59f3a21451e151dc5cd345d0be7a5613 376 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 366 5.8E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_10610 59f3a21451e151dc5cd345d0be7a5613 376 SMART SM00388 144 211 3.4E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_10610 59f3a21451e151dc5cd345d0be7a5613 376 SMART SM00387 258 369 4.9E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_10610 59f3a21451e151dc5cd345d0be7a5613 376 SUPERFAMILY SSF47384 132 210 9.42E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_10610 59f3a21451e151dc5cd345d0be7a5613 376 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 258 367 1.7E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_10610 59f3a21451e151dc5cd345d0be7a5613 376 Pfam PF00512 His Kinase A (phospho-acceptor) domain 145 208 4.4E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_10610 59f3a21451e151dc5cd345d0be7a5613 376 Gene3D G3DSA:1.10.287.130 126 213 1.4E-16 T 12-10-2018 N288_10610 59f3a21451e151dc5cd345d0be7a5613 376 SUPERFAMILY SSF55874 200 370 2.23E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_10610 59f3a21451e151dc5cd345d0be7a5613 376 Gene3D G3DSA:3.30.565.10 215 374 1.6E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_24945 a95358269cf1688f51a9aa76b4d9902c 201 Pfam PF13346 ABC-2 family transporter protein 3 197 7.7E-38 T 12-10-2018 IPR025699 ABC-2 membrane transporter-like N288_01050 70655a74fa1be79b95133f7f42711067 324 PIRSF PIRSF004793 50 319 2.5E-99 T 12-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 N288_01050 70655a74fa1be79b95133f7f42711067 324 SUPERFAMILY SSF143597 89 288 4.71E-72 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily N288_01050 70655a74fa1be79b95133f7f42711067 324 Gene3D G3DSA:3.40.1700.10 150 304 1.1E-63 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily N288_01050 70655a74fa1be79b95133f7f42711067 324 Hamap MF_01499 Diadenylate cyclase [dacA]. 50 303 34.794 T 12-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 N288_01050 70655a74fa1be79b95133f7f42711067 324 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 167 284 9.4E-45 T 12-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal N288_01050 70655a74fa1be79b95133f7f42711067 324 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 52 303 8.9E-104 T 12-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 N288_01765 75286da4e6e6c1c41662d17253c50291 337 Pfam PF08378 Nuclease-related domain 41 155 4.4E-20 T 12-10-2018 IPR011528 Nuclease-related domain, NERD N288_22565 5e839c385532bdfa593852c9f174d090 338 Pfam PF01370 NAD dependent epimerase/dehydratase family 29 196 2.6E-6 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 N288_22565 5e839c385532bdfa593852c9f174d090 338 Gene3D G3DSA:3.40.50.720 23 322 3.8E-25 T 12-10-2018 N288_22565 5e839c385532bdfa593852c9f174d090 338 SUPERFAMILY SSF51735 29 319 4.87E-26 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_01375 867d874c7903cf6d00e146c7f9d121c9 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.2E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_01375 867d874c7903cf6d00e146c7f9d121c9 339 SUPERFAMILY SSF47413 1 59 2.95E-20 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_01375 867d874c7903cf6d00e146c7f9d121c9 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 N288_01375 867d874c7903cf6d00e146c7f9d121c9 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.0E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_01375 867d874c7903cf6d00e146c7f9d121c9 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.0E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_01375 867d874c7903cf6d00e146c7f9d121c9 339 Gene3D G3DSA:1.10.260.40 1 60 1.9E-24 T 12-10-2018 N288_01375 867d874c7903cf6d00e146c7f9d121c9 339 Gene3D G3DSA:3.40.50.2300 76 325 7.5E-82 T 12-10-2018 N288_01375 867d874c7903cf6d00e146c7f9d121c9 339 Gene3D G3DSA:3.40.50.2300 164 331 7.5E-82 T 12-10-2018 N288_01375 867d874c7903cf6d00e146c7f9d121c9 339 Pfam PF13377 Periplasmic binding protein-like domain 173 333 8.9E-41 T 12-10-2018 N288_01375 867d874c7903cf6d00e146c7f9d121c9 339 SUPERFAMILY SSF53822 60 334 5.3E-80 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_01375 867d874c7903cf6d00e146c7f9d121c9 339 SMART SM00354 1 71 1.2E-33 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_24195 c873cb7791714e7616af69ffc02c6de0 505 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 12 497 8.6E-189 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 N288_24195 c873cb7791714e7616af69ffc02c6de0 505 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 50 497 8.7E-157 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 N288_03505 7b190aa53774524651de05d7bbe3c58f 216 Hamap MF_02088 Probable queuosine precursor transporter. 1 205 18.344 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 N288_03505 7b190aa53774524651de05d7bbe3c58f 216 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 4 198 2.1E-53 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 N288_03505 7b190aa53774524651de05d7bbe3c58f 216 Pfam PF02592 Putative vitamin uptake transporter 33 192 4.0E-54 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 N288_03470 cd80d978e27d8370d5c61c1d208d2a06 108 Gene3D G3DSA:1.10.287.1080 6 108 3.6E-10 T 12-10-2018 N288_03470 cd80d978e27d8370d5c61c1d208d2a06 108 SUPERFAMILY SSF101386 48 106 1.18E-5 T 12-10-2018 N288_11780 dddc895fd203ddf866991c9e9ae93c9d 572 Gene3D G3DSA:3.30.457.10 71 141 1.3E-5 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily N288_11780 dddc895fd203ddf866991c9e9ae93c9d 572 SUPERFAMILY SSF55383 70 144 3.53E-7 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily N288_11780 dddc895fd203ddf866991c9e9ae93c9d 572 Gene3D G3DSA:3.20.20.80 279 550 1.5E-75 T 12-10-2018 N288_11780 dddc895fd203ddf866991c9e9ae93c9d 572 Gene3D G3DSA:3.10.50.10 467 526 1.5E-75 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily N288_11780 dddc895fd203ddf866991c9e9ae93c9d 572 Gene3D G3DSA:2.30.30.40 176 229 1.1E-5 T 12-10-2018 N288_11780 dddc895fd203ddf866991c9e9ae93c9d 572 Pfam PF00704 Glycosyl hydrolases family 18 333 551 6.7E-24 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 N288_11780 dddc895fd203ddf866991c9e9ae93c9d 572 SMART SM00636 250 554 4.7E-6 T 12-10-2018 IPR011583 Chitinase II GO:0008061 N288_11780 dddc895fd203ddf866991c9e9ae93c9d 572 Pfam PF07833 Copper amine oxidase N-terminal domain 67 142 9.0E-7 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal N288_11780 dddc895fd203ddf866991c9e9ae93c9d 572 SUPERFAMILY SSF51445 277 561 3.76E-39 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_11780 dddc895fd203ddf866991c9e9ae93c9d 572 ProSitePatterns PS01095 Chitinases family 18 active site. 354 362 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 N288_23565 6839d2174cb53a335f2e427e345f5d54 90 Pfam PF12116 Stage III sporulation protein D 2 82 1.6E-41 T 12-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID N288_23565 6839d2174cb53a335f2e427e345f5d54 90 Gene3D G3DSA:1.10.10.60 1 90 5.6E-44 T 12-10-2018 N288_23565 6839d2174cb53a335f2e427e345f5d54 90 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 41 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 N288_23565 6839d2174cb53a335f2e427e345f5d54 90 TIGRFAM TIGR02844 spore_III_D: sporulation transcriptional regulator SpoIIID 2 81 1.3E-46 T 12-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID N288_21715 0af8c7f3ad2632cc8058df7dc227d1ef 394 Gene3D G3DSA:3.40.50.12590 326 393 2.0E-21 T 12-10-2018 N288_21715 0af8c7f3ad2632cc8058df7dc227d1ef 394 PIRSF PIRSF001549 3 385 2.6E-85 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 N288_21715 0af8c7f3ad2632cc8058df7dc227d1ef 394 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 374 32.814 T 12-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 N288_21715 0af8c7f3ad2632cc8058df7dc227d1ef 394 Pfam PF13393 Histidyl-tRNA synthetase 12 320 4.3E-77 T 12-10-2018 N288_21715 0af8c7f3ad2632cc8058df7dc227d1ef 394 Gene3D G3DSA:3.30.930.10 1 325 1.8E-103 T 12-10-2018 N288_21715 0af8c7f3ad2632cc8058df7dc227d1ef 394 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 14 324 2.6E-99 T 12-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 N288_21715 0af8c7f3ad2632cc8058df7dc227d1ef 394 SUPERFAMILY SSF55681 9 326 4.35E-65 T 12-10-2018 N288_24355 0ac3dee529fd65d6325df9cbec543821 299 SMART SM00450 172 292 2.2E-12 T 12-10-2018 IPR001763 Rhodanese-like domain N288_24355 0ac3dee529fd65d6325df9cbec543821 299 SMART SM00450 8 149 6.8E-18 T 12-10-2018 IPR001763 Rhodanese-like domain N288_24355 0ac3dee529fd65d6325df9cbec543821 299 SUPERFAMILY SSF52821 5 165 1.1E-31 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_24355 0ac3dee529fd65d6325df9cbec543821 299 Pfam PF00581 Rhodanese-like domain 174 288 4.6E-16 T 12-10-2018 IPR001763 Rhodanese-like domain N288_24355 0ac3dee529fd65d6325df9cbec543821 299 Pfam PF00581 Rhodanese-like domain 9 146 8.0E-14 T 12-10-2018 IPR001763 Rhodanese-like domain N288_24355 0ac3dee529fd65d6325df9cbec543821 299 Gene3D G3DSA:3.40.250.10 2 163 9.1E-40 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_24355 0ac3dee529fd65d6325df9cbec543821 299 SUPERFAMILY SSF52821 169 297 3.8E-26 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_24355 0ac3dee529fd65d6325df9cbec543821 299 Gene3D G3DSA:3.40.250.10 165 299 4.6E-30 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_08455 581b29d54df9fb9b8305e4f3f3a36355 564 SUPERFAMILY SSF55486 33 559 1.79E-129 T 12-10-2018 N288_08455 581b29d54df9fb9b8305e4f3f3a36355 564 Gene3D G3DSA:1.10.1370.30 1 564 2.7E-215 T 12-10-2018 N288_08455 581b29d54df9fb9b8305e4f3f3a36355 564 TIGRFAM TIGR02289 M3_not_pepF: oligoendopeptidase, M3 family 15 560 1.3E-227 T 12-10-2018 IPR011976 Peptidase M3B, oligoendopeptidase-related N288_16925 ab62aa4d77dfe626dbd0ef228f2f0ea2 138 Gene3D G3DSA:3.40.50.1380 1 137 3.9E-54 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily N288_16925 ab62aa4d77dfe626dbd0ef228f2f0ea2 138 SUPERFAMILY SSF52335 1 131 6.93E-53 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily N288_16925 ab62aa4d77dfe626dbd0ef228f2f0ea2 138 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 1 120 33.798 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 N288_16925 ab62aa4d77dfe626dbd0ef228f2f0ea2 138 ProSitePatterns PS01335 Methylglyoxal synthase active site. 54 61 - T 12-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 N288_16925 ab62aa4d77dfe626dbd0ef228f2f0ea2 138 Pfam PF02142 MGS-like domain 15 107 5.0E-17 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain N288_16925 ab62aa4d77dfe626dbd0ef228f2f0ea2 138 PIRSF PIRSF006614 1 136 4.7E-61 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 N288_16925 ab62aa4d77dfe626dbd0ef228f2f0ea2 138 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 2 121 4.7E-57 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 N288_16925 ab62aa4d77dfe626dbd0ef228f2f0ea2 138 SMART SM00851 14 107 2.1E-22 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain N288_01395 bfb2d495726e3ef9257d47cc6d8ffae3 274 SUPERFAMILY SSF161098 7 273 2.62E-76 T 12-10-2018 IPR035906 MetI-like superfamily N288_01395 bfb2d495726e3ef9257d47cc6d8ffae3 274 Gene3D G3DSA:1.10.3720.10 2 266 1.4E-72 T 12-10-2018 IPR035906 MetI-like superfamily N288_01395 bfb2d495726e3ef9257d47cc6d8ffae3 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 268 3.8E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_19370 c116bbb35ad6881d087cf6ebd1b73c48 152 Pfam PF10702 Protein of unknown function (DUF2507) 20 142 5.9E-47 T 12-10-2018 IPR019642 Protein of unknown function DUF2507 N288_19370 c116bbb35ad6881d087cf6ebd1b73c48 152 SUPERFAMILY SSF111126 16 128 1.2E-25 T 12-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily N288_19370 c116bbb35ad6881d087cf6ebd1b73c48 152 Gene3D G3DSA:3.30.1380.20 2 149 6.9E-54 T 12-10-2018 N288_12230 a751c46d2e4bd583d45644feebee4c0a 242 SUPERFAMILY SSF160104 13 145 3.4E-10 T 12-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 N288_12230 a751c46d2e4bd583d45644feebee4c0a 242 Pfam PF09844 Uncharacterized conserved protein (COG2071) 22 231 2.9E-61 T 12-10-2018 IPR018644 Protein of unknown function DUF2071 N288_16765 a72922df7ca6a933c0ac7535e148acbf 437 Gene3D G3DSA:1.25.40.10 271 435 4.5E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_16765 a72922df7ca6a933c0ac7535e148acbf 437 SUPERFAMILY SSF53098 104 275 6.79E-27 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily N288_16765 a72922df7ca6a933c0ac7535e148acbf 437 Pfam PF13482 RNase_H superfamily 105 273 2.1E-39 T 12-10-2018 IPR038720 YprB, ribonuclease H-like domain N288_16765 a72922df7ca6a933c0ac7535e148acbf 437 SUPERFAMILY SSF48452 290 388 8.6E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_06795 24cbd91c9bebf076c41b90f33be8437d 289 Gene3D G3DSA:3.10.50.40 141 232 4.2E-40 T 12-10-2018 N288_06795 24cbd91c9bebf076c41b90f33be8437d 289 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 169 190 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 N288_06795 24cbd91c9bebf076c41b90f33be8437d 289 Hamap MF_01145 Foldase protein PrsA [prsA]. 2 286 21.812 T 12-10-2018 IPR023059 Foldase protein PrsA GO:0003755 N288_06795 24cbd91c9bebf076c41b90f33be8437d 289 Pfam PF13616 PPIC-type PPIASE domain 142 232 1.4E-28 T 12-10-2018 N288_06795 24cbd91c9bebf076c41b90f33be8437d 289 Gene3D G3DSA:1.10.4030.30 45 240 4.2E-40 T 12-10-2018 N288_06795 24cbd91c9bebf076c41b90f33be8437d 289 SUPERFAMILY SSF109998 29 170 9.94E-18 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily N288_06795 24cbd91c9bebf076c41b90f33be8437d 289 SUPERFAMILY SSF54534 133 229 2.49E-34 T 12-10-2018 N288_00810 a06dbe888d5b33dbd4222d55cbc657a2 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 32.622 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00810 a06dbe888d5b33dbd4222d55cbc657a2 132 SUPERFAMILY SSF56047 2 132 2.88E-48 T 12-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00810 a06dbe888d5b33dbd4222d55cbc657a2 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00810 a06dbe888d5b33dbd4222d55cbc657a2 132 Gene3D G3DSA:3.30.1490.10 75 132 3.0E-26 T 12-10-2018 N288_00810 a06dbe888d5b33dbd4222d55cbc657a2 132 Pfam PF00410 Ribosomal protein S8 5 132 2.3E-53 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00810 a06dbe888d5b33dbd4222d55cbc657a2 132 Gene3D G3DSA:3.30.1370.30 4 74 6.2E-33 T 12-10-2018 N288_24540 dcae05a450e25378772aada2ccf45c34 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 5.1E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24540 dcae05a450e25378772aada2ccf45c34 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 5.1E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24540 dcae05a450e25378772aada2ccf45c34 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 5.1E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24540 dcae05a450e25378772aada2ccf45c34 255 Gene3D G3DSA:3.40.50.720 1 253 4.5E-56 T 12-10-2018 N288_24540 dcae05a450e25378772aada2ccf45c34 255 PIRSF PIRSF000126 1 254 1.7E-64 T 12-10-2018 N288_24540 dcae05a450e25378772aada2ccf45c34 255 Pfam PF00106 short chain dehydrogenase 3 189 2.9E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24540 dcae05a450e25378772aada2ccf45c34 255 SUPERFAMILY SSF51735 3 249 3.65E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_24540 dcae05a450e25378772aada2ccf45c34 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 3.7E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24540 dcae05a450e25378772aada2ccf45c34 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.7E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24540 dcae05a450e25378772aada2ccf45c34 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 3.7E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24540 dcae05a450e25378772aada2ccf45c34 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 3.7E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24540 dcae05a450e25378772aada2ccf45c34 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 3.7E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_19045 0f548c5036c77f0dd2aefbcd126b3602 288 Pfam PF04085 rod shape-determining protein MreC 123 271 1.9E-44 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 N288_19045 0f548c5036c77f0dd2aefbcd126b3602 288 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 6 277 4.9E-59 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 N288_19045 0f548c5036c77f0dd2aefbcd126b3602 288 Gene3D G3DSA:2.40.10.340 113 186 3.1E-25 T 12-10-2018 N288_19045 0f548c5036c77f0dd2aefbcd126b3602 288 Gene3D G3DSA:2.40.10.350 187 259 1.1E-28 T 12-10-2018 N288_19045 0f548c5036c77f0dd2aefbcd126b3602 288 PIRSF PIRSF038471 1 287 2.6E-69 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 N288_12825 ecb565b06c2c13fde0eabee8569c522c 293 Pfam PF00483 Nucleotidyl transferase 4 263 1.8E-32 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 N288_12825 ecb565b06c2c13fde0eabee8569c522c 293 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 262 3.1E-111 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 N288_12825 ecb565b06c2c13fde0eabee8569c522c 293 SUPERFAMILY SSF53448 1 266 8.35E-68 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_12825 ecb565b06c2c13fde0eabee8569c522c 293 Gene3D G3DSA:3.90.550.10 1 287 2.3E-89 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_11790 1cce307bcea02cfd0b5672a90a9161f2 287 Pfam PF00583 Acetyltransferase (GNAT) family 185 274 1.7E-11 T 12-10-2018 IPR000182 GNAT domain N288_11790 1cce307bcea02cfd0b5672a90a9161f2 287 SUPERFAMILY SSF55729 11 283 1.0E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_11790 1cce307bcea02cfd0b5672a90a9161f2 287 Gene3D G3DSA:3.40.630.30 4 150 5.3E-5 T 12-10-2018 N288_11790 1cce307bcea02cfd0b5672a90a9161f2 287 Gene3D G3DSA:3.40.630.30 157 285 1.8E-18 T 12-10-2018 N288_04940 2c735701fd844da76d6509ab502f7ad5 564 PIRSF PIRSF000106 1 564 1.2E-220 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 N288_04940 2c735701fd844da76d6509ab502f7ad5 564 Pfam PF00390 Malic enzyme, N-terminal domain 82 262 1.1E-69 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 N288_04940 2c735701fd844da76d6509ab502f7ad5 564 Gene3D G3DSA:3.40.50.720 271 564 1.1E-106 T 12-10-2018 N288_04940 2c735701fd844da76d6509ab502f7ad5 564 PRINTS PR00072 Malic enzyme signature 244 262 7.4E-68 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 N288_04940 2c735701fd844da76d6509ab502f7ad5 564 PRINTS PR00072 Malic enzyme signature 411 427 7.4E-68 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 N288_04940 2c735701fd844da76d6509ab502f7ad5 564 PRINTS PR00072 Malic enzyme signature 300 316 7.4E-68 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 N288_04940 2c735701fd844da76d6509ab502f7ad5 564 PRINTS PR00072 Malic enzyme signature 269 285 7.4E-68 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 N288_04940 2c735701fd844da76d6509ab502f7ad5 564 PRINTS PR00072 Malic enzyme signature 185 207 7.4E-68 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 N288_04940 2c735701fd844da76d6509ab502f7ad5 564 PRINTS PR00072 Malic enzyme signature 87 111 7.4E-68 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 N288_04940 2c735701fd844da76d6509ab502f7ad5 564 PRINTS PR00072 Malic enzyme signature 149 178 7.4E-68 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 N288_04940 2c735701fd844da76d6509ab502f7ad5 564 SMART SM00919 273 533 4.5E-114 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 N288_04940 2c735701fd844da76d6509ab502f7ad5 564 Pfam PF03949 Malic enzyme, NAD binding domain 273 532 1.9E-99 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 N288_04940 2c735701fd844da76d6509ab502f7ad5 564 SUPERFAMILY SSF51735 273 561 5.91E-89 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_04940 2c735701fd844da76d6509ab502f7ad5 564 SMART SM01274 81 263 7.7E-90 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 N288_04940 2c735701fd844da76d6509ab502f7ad5 564 ProSitePatterns PS00331 Malic enzymes signature. 269 285 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 N288_04940 2c735701fd844da76d6509ab502f7ad5 564 SUPERFAMILY SSF53223 8 272 1.94E-100 T 12-10-2018 N288_04940 2c735701fd844da76d6509ab502f7ad5 564 Gene3D G3DSA:3.40.50.10380 15 270 1.5E-99 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 N288_01430 bb19ab233a89da88c331e58f91709b47 357 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 98 109 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_01430 bb19ab233a89da88c331e58f91709b47 357 Gene3D G3DSA:3.40.50.20 1 119 1.9E-36 T 12-10-2018 N288_01430 bb19ab233a89da88c331e58f91709b47 357 SUPERFAMILY SSF56059 131 349 1.5E-63 T 12-10-2018 N288_01430 bb19ab233a89da88c331e58f91709b47 357 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 344 42.339 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_01430 bb19ab233a89da88c331e58f91709b47 357 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 286 314 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_01430 bb19ab233a89da88c331e58f91709b47 357 Pfam PF01820 D-ala D-ala ligase N-terminus 4 120 7.2E-30 T 12-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_01430 bb19ab233a89da88c331e58f91709b47 357 PIRSF PIRSF039102 1 352 1.7E-116 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_01430 bb19ab233a89da88c331e58f91709b47 357 Gene3D G3DSA:3.30.470.20 219 357 7.7E-52 T 12-10-2018 N288_01430 bb19ab233a89da88c331e58f91709b47 357 Pfam PF07478 D-ala D-ala ligase C-terminus 139 340 2.9E-83 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_01430 bb19ab233a89da88c331e58f91709b47 357 SUPERFAMILY SSF52440 1 130 5.08E-36 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily N288_01430 bb19ab233a89da88c331e58f91709b47 357 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 343 2.6E-118 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_01430 bb19ab233a89da88c331e58f91709b47 357 Gene3D G3DSA:3.30.1490.20 146 218 2.4E-31 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 N288_20430 f09a08fcddf5a30e540c8edd0cf9607c 252 SUPERFAMILY SSF109635 2 90 2.22E-11 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily N288_20430 f09a08fcddf5a30e540c8edd0cf9607c 252 SUPERFAMILY SSF57716 91 120 1.03E-6 T 12-10-2018 N288_20430 f09a08fcddf5a30e540c8edd0cf9607c 252 Gene3D G3DSA:1.20.120.910 1 127 3.6E-29 T 12-10-2018 N288_20430 f09a08fcddf5a30e540c8edd0cf9607c 252 TIGRFAM TIGR02890 bacill_yteA: regulatory protein, yteA family 6 164 1.8E-50 T 12-10-2018 IPR014240 Regulatory protein, YteA family N288_20430 f09a08fcddf5a30e540c8edd0cf9607c 252 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 89 117 4.4E-9 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 N288_03300 302c63bca7a84e45d95e70fc32b4b322 347 Pfam PF07730 Histidine kinase 145 211 1.0E-15 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 N288_03300 302c63bca7a84e45d95e70fc32b4b322 347 PIRSF PIRSF037431 2 346 1.9E-119 T 12-10-2018 IPR017202 Sensor histidine kinase LiaS/VraS GO:0000155|GO:0000160|GO:0004673|GO:0016021 N288_03300 302c63bca7a84e45d95e70fc32b4b322 347 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 247 337 2.1E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_03300 302c63bca7a84e45d95e70fc32b4b322 347 Gene3D G3DSA:3.30.565.10 209 343 1.8E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_03300 302c63bca7a84e45d95e70fc32b4b322 347 SUPERFAMILY SSF55874 218 337 2.62E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_03300 302c63bca7a84e45d95e70fc32b4b322 347 SMART SM00387 247 340 3.2E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_03425 734a69c5a866458ddea437542867c03f 71 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 3 69 17.325 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 N288_03425 734a69c5a866458ddea437542867c03f 71 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 6 48 3.4E-18 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 N288_03425 734a69c5a866458ddea437542867c03f 71 Pfam PF02416 mttA/Hcf106 family 6 56 8.0E-19 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 N288_03425 734a69c5a866458ddea437542867c03f 71 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 23 42 3.6E-5 T 12-10-2018 N288_03425 734a69c5a866458ddea437542867c03f 71 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 3 23 3.6E-5 T 12-10-2018 N288_03425 734a69c5a866458ddea437542867c03f 71 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 42 60 3.6E-5 T 12-10-2018 N288_25750 445621fb02fad00186ef6ec944ce7bab 123 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 3 113 5.5E-35 T 12-10-2018 IPR018745 Domain of unknown function DUF2294 N288_11865 17a2acce0f30ad3f2bde711eb72b227a 316 SUPERFAMILY SSF55326 6 130 1.31E-36 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily N288_11865 17a2acce0f30ad3f2bde711eb72b227a 316 PIRSF PIRSF036407 1 316 6.0E-116 T 12-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 N288_11865 17a2acce0f30ad3f2bde711eb72b227a 316 SUPERFAMILY SSF56042 133 312 4.64E-52 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily N288_11865 17a2acce0f30ad3f2bde711eb72b227a 316 Gene3D G3DSA:3.90.650.10 132 311 6.4E-61 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily N288_11865 17a2acce0f30ad3f2bde711eb72b227a 316 Hamap MF_00625 Selenide, water dikinase [selD]. 1 316 37.891 T 12-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 N288_11865 17a2acce0f30ad3f2bde711eb72b227a 316 Pfam PF02769 AIR synthase related protein, C-terminal domain 137 312 4.3E-31 T 12-10-2018 IPR010918 PurM-like, C-terminal domain N288_11865 17a2acce0f30ad3f2bde711eb72b227a 316 Pfam PF00586 AIR synthase related protein, N-terminal domain 27 125 7.1E-19 T 12-10-2018 IPR016188 PurM-like, N-terminal domain N288_11865 17a2acce0f30ad3f2bde711eb72b227a 316 Gene3D G3DSA:3.30.1330.10 2 130 1.1E-39 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily N288_11865 17a2acce0f30ad3f2bde711eb72b227a 316 TIGRFAM TIGR00476 selD: selenide, water dikinase 4 284 4.5E-116 T 12-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 N288_07485 c70d963d5001b3a601a4b6433ad3043b 256 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 230 1.3E-76 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 N288_07485 c70d963d5001b3a601a4b6433ad3043b 256 PIRSF PIRSF000728 1 250 3.9E-79 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 N288_07485 c70d963d5001b3a601a4b6433ad3043b 256 SUPERFAMILY SSF53633 1 242 2.62E-63 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily N288_07485 c70d963d5001b3a601a4b6433ad3043b 256 Pfam PF00696 Amino acid kinase family 3 232 5.8E-47 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 N288_07485 c70d963d5001b3a601a4b6433ad3043b 256 Hamap MF_00082 Acetylglutamate kinase [argB]. 1 248 38.533 T 12-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 N288_07485 c70d963d5001b3a601a4b6433ad3043b 256 Gene3D G3DSA:3.40.1160.10 2 237 1.9E-72 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily N288_11415 30eaf36a3ce08a58fa32567c47f4482a 246 Gene3D G3DSA:3.90.550.10 2 241 2.1E-56 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_11415 30eaf36a3ce08a58fa32567c47f4482a 246 SUPERFAMILY SSF53448 10 210 6.75E-48 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_11415 30eaf36a3ce08a58fa32567c47f4482a 246 Pfam PF00535 Glycosyl transferase family 2 12 167 3.1E-27 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 N288_22110 8a39e3f0c270881024845fe8431c25c6 379 Pfam PF02371 Transposase IS116/IS110/IS902 family 254 339 2.6E-25 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 N288_22110 8a39e3f0c270881024845fe8431c25c6 379 Pfam PF01548 Transposase 9 154 3.1E-25 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 N288_09525 d7baffec251da7ce30418dc05990753b 788 Gene3D G3DSA:3.40.50.880 127 330 1.6E-6 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_09525 d7baffec251da7ce30418dc05990753b 788 SUPERFAMILY SSF52317 180 323 3.43E-7 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_08935 6e7e803005cfd32785e436112b5cebd2 402 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 330 354 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_08935 6e7e803005cfd32785e436112b5cebd2 402 Pfam PF01098 Cell cycle protein 13 372 1.6E-105 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_18950 f9b4061493c9599d7781503ffb65e5cd 283 Gene3D G3DSA:3.20.20.70 123 265 1.1E-100 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_18950 f9b4061493c9599d7781503ffb65e5cd 283 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 109 274 2.9E-61 T 12-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 N288_18950 f9b4061493c9599d7781503ffb65e5cd 283 SUPERFAMILY SSF51690 109 275 2.67E-58 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 N288_18950 f9b4061493c9599d7781503ffb65e5cd 283 PIRSF PIRSF006250 1 278 1.3E-92 T 12-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 N288_18950 f9b4061493c9599d7781503ffb65e5cd 283 SUPERFAMILY SSF54675 3 108 4.71E-27 T 12-10-2018 N288_18950 f9b4061493c9599d7781503ffb65e5cd 283 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 10 274 4.0E-99 T 12-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 N288_18950 f9b4061493c9599d7781503ffb65e5cd 283 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 19 107 2.9E-23 T 12-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 N288_18950 f9b4061493c9599d7781503ffb65e5cd 283 Gene3D G3DSA:3.90.1170.20 13 272 1.1E-100 T 12-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 N288_05120 86d72b09f8b2d7477039055299657ba0 415 Pfam PF13416 Bacterial extracellular solute-binding protein 55 358 3.3E-48 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein N288_05120 86d72b09f8b2d7477039055299657ba0 415 Gene3D G3DSA:3.40.190.10 152 408 1.2E-100 T 12-10-2018 N288_05120 86d72b09f8b2d7477039055299657ba0 415 SUPERFAMILY SSF53850 25 413 2.96E-86 T 12-10-2018 N288_05120 86d72b09f8b2d7477039055299657ba0 415 Gene3D G3DSA:3.40.190.10 53 372 1.2E-100 T 12-10-2018 N288_21765 ea82aa6ded28f8548455b53a876f1828 80 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 1 37 4.9E-7 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 N288_21765 ea82aa6ded28f8548455b53a876f1828 80 Gene3D G3DSA:3.30.70.1070 18 80 7.6E-10 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 N288_21765 ea82aa6ded28f8548455b53a876f1828 80 SUPERFAMILY SSF110997 44 78 3.01E-7 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 N288_21765 ea82aa6ded28f8548455b53a876f1828 80 Pfam PF05036 Sporulation related domain 44 77 2.8E-6 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 N288_21765 ea82aa6ded28f8548455b53a876f1828 80 SUPERFAMILY SSF53187 1 42 2.92E-7 T 12-10-2018 N288_25830 6d741fa2ccc9e715ca3f78cfac361201 281 Pfam PF09648 YycH protein 36 255 1.4E-60 T 12-10-2018 IPR018604 Regulatory protein YycH-like GO:0016021 N288_25830 6d741fa2ccc9e715ca3f78cfac361201 281 Gene3D G3DSA:3.10.450.660 47 257 1.3E-51 T 12-10-2018 N288_25830 6d741fa2ccc9e715ca3f78cfac361201 281 Gene3D G3DSA:3.30.310.160 70 186 1.3E-51 T 12-10-2018 N288_20785 6e113cf2ee6fe03aa0b5f3bb0e870ba8 158 Pfam PF01899 Na+/H+ ion antiporter subunit 9 156 1.5E-41 T 12-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 N288_20785 6e113cf2ee6fe03aa0b5f3bb0e870ba8 158 PIRSF PIRSF019239 1 158 4.6E-45 T 12-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 N288_18815 5a3fd3eb10a07c8acc59bee7fef82524 424 SUPERFAMILY SSF52954 329 422 1.21E-25 T 12-10-2018 N288_18815 5a3fd3eb10a07c8acc59bee7fef82524 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 420 34.151 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 N288_18815 5a3fd3eb10a07c8acc59bee7fef82524 424 Pfam PF03129 Anticodon binding domain 331 420 1.3E-16 T 12-10-2018 IPR004154 Anticodon-binding N288_18815 5a3fd3eb10a07c8acc59bee7fef82524 424 Pfam PF13393 Histidyl-tRNA synthetase 8 312 1.2E-46 T 12-10-2018 N288_18815 5a3fd3eb10a07c8acc59bee7fef82524 424 PIRSF PIRSF001549 1 422 1.8E-119 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 N288_18815 5a3fd3eb10a07c8acc59bee7fef82524 424 Gene3D G3DSA:3.30.930.10 2 324 5.6E-116 T 12-10-2018 N288_18815 5a3fd3eb10a07c8acc59bee7fef82524 424 SUPERFAMILY SSF55681 4 318 2.77E-95 T 12-10-2018 N288_18815 5a3fd3eb10a07c8acc59bee7fef82524 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 5 410 3.4E-157 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 N288_18815 5a3fd3eb10a07c8acc59bee7fef82524 424 Gene3D G3DSA:3.40.50.800 328 421 2.4E-27 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily N288_23360 df9960c2e3b7ef7a3bca1ac533ccdb5a 801 Pfam PF00395 S-layer homology domain 151 192 2.3E-7 T 12-10-2018 IPR001119 S-layer homology domain N288_23360 df9960c2e3b7ef7a3bca1ac533ccdb5a 801 Pfam PF00395 S-layer homology domain 104 135 6.6E-7 T 12-10-2018 IPR001119 S-layer homology domain N288_23360 df9960c2e3b7ef7a3bca1ac533ccdb5a 801 Pfam PF00395 S-layer homology domain 37 77 1.1E-8 T 12-10-2018 IPR001119 S-layer homology domain N288_23360 df9960c2e3b7ef7a3bca1ac533ccdb5a 801 Gene3D G3DSA:2.60.40.1220 606 697 4.3E-10 T 12-10-2018 N288_23360 df9960c2e3b7ef7a3bca1ac533ccdb5a 801 Gene3D G3DSA:2.60.40.1220 204 299 4.7E-10 T 12-10-2018 N288_10335 4fc82489fa397f2de86292945a3588ac 207 TIGRFAM TIGR00498 lexA: repressor LexA 1 206 9.5E-81 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 N288_10335 4fc82489fa397f2de86292945a3588ac 207 Pfam PF00717 Peptidase S24-like 124 190 7.0E-18 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C N288_10335 4fc82489fa397f2de86292945a3588ac 207 SUPERFAMILY SSF51306 83 204 3.66E-35 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily N288_10335 4fc82489fa397f2de86292945a3588ac 207 Hamap MF_00015 LexA repressor [lexA]. 3 206 35.119 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 N288_10335 4fc82489fa397f2de86292945a3588ac 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 132 143 9.8E-10 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 N288_10335 4fc82489fa397f2de86292945a3588ac 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 121 131 9.8E-10 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 N288_10335 4fc82489fa397f2de86292945a3588ac 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 161 173 9.8E-10 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 N288_10335 4fc82489fa397f2de86292945a3588ac 207 Gene3D G3DSA:1.10.10.10 3 68 2.8E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_10335 4fc82489fa397f2de86292945a3588ac 207 Gene3D G3DSA:2.10.109.10 89 206 3.1E-43 T 12-10-2018 N288_10335 4fc82489fa397f2de86292945a3588ac 207 SUPERFAMILY SSF46785 3 70 1.09E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_10335 4fc82489fa397f2de86292945a3588ac 207 Pfam PF01726 LexA DNA binding domain 1 65 5.5E-28 T 12-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 N288_01535 82f1254af69305945bff4cdef4a21248 133 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 129 3.8E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_01535 82f1254af69305945bff4cdef4a21248 133 Gene3D G3DSA:3.30.565.10 7 131 2.6E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_01535 82f1254af69305945bff4cdef4a21248 133 SUPERFAMILY SSF55874 21 128 2.36E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_21960 e0f7ce677ee907f97277b6eee1c37369 328 SUPERFAMILY SSF53822 33 272 3.44E-13 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_21960 e0f7ce677ee907f97277b6eee1c37369 328 Gene3D G3DSA:3.40.50.2300 134 321 7.4E-88 T 12-10-2018 N288_21960 e0f7ce677ee907f97277b6eee1c37369 328 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 40 326 1.4E-62 T 12-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 N288_21960 e0f7ce677ee907f97277b6eee1c37369 328 Gene3D G3DSA:3.40.50.2300 37 287 7.4E-88 T 12-10-2018 N288_08815 92626571d4494376d500476df6478a91 510 ProSitePatterns PS01303 BCCT family of transporters signature. 314 323 - T 12-10-2018 IPR018093 BCCT transporter, conserved site N288_08815 92626571d4494376d500476df6478a91 510 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 7 497 1.0E-200 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 N288_08815 92626571d4494376d500476df6478a91 510 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 50 497 4.1E-169 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 N288_24625 afea4a295298b8911a34de1a40debf65 99 Pfam PF07875 Coat F domain 15 74 1.9E-22 T 12-10-2018 IPR012851 Spore coat protein CotF-like N288_13180 fda95fed490c7d135253ef60fdabcec9 247 Pfam PF09929 Putative PD-(D/E)XK phosphodiesterase (DUF2161) 103 224 4.9E-41 T 12-10-2018 IPR018679 Putative PD-(D/E)XK phosphodiesterase (DUF2161) N288_12895 289d8809c7742ec18c9c64c3c1d714db 421 Pfam PF00512 His Kinase A (phospho-acceptor) domain 198 258 1.5E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_12895 289d8809c7742ec18c9c64c3c1d714db 421 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 305 407 3.7E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_12895 289d8809c7742ec18c9c64c3c1d714db 421 SMART SM00387 303 409 2.2E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_12895 289d8809c7742ec18c9c64c3c1d714db 421 SUPERFAMILY SSF55874 252 409 3.8E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_12895 289d8809c7742ec18c9c64c3c1d714db 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 387 1.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_12895 289d8809c7742ec18c9c64c3c1d714db 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 354 1.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_12895 289d8809c7742ec18c9c64c3c1d714db 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 406 1.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_12895 289d8809c7742ec18c9c64c3c1d714db 421 SMART SM00388 196 262 9.8E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 N288_12895 289d8809c7742ec18c9c64c3c1d714db 421 Gene3D G3DSA:1.10.287.130 199 259 5.2E-20 T 12-10-2018 N288_12895 289d8809c7742ec18c9c64c3c1d714db 421 SUPERFAMILY SSF47384 181 259 2.94E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 N288_12895 289d8809c7742ec18c9c64c3c1d714db 421 Gene3D G3DSA:3.30.565.10 263 416 1.1E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_07785 6f04547d3ac598acef08844e7fc2b8de 338 PIRSF PIRSF011570 1 338 3.6E-154 T 12-10-2018 IPR010894 Stage V sporulation AD N288_07785 6f04547d3ac598acef08844e7fc2b8de 338 Gene3D G3DSA:3.40.47.40 1 338 3.4E-145 T 12-10-2018 IPR038369 Stage V sporulation AD superfamily N288_07785 6f04547d3ac598acef08844e7fc2b8de 338 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 4 335 1.3E-154 T 12-10-2018 IPR010894 Stage V sporulation AD N288_07785 6f04547d3ac598acef08844e7fc2b8de 338 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 5 335 4.9E-149 T 12-10-2018 IPR010894 Stage V sporulation AD N288_07785 6f04547d3ac598acef08844e7fc2b8de 338 SUPERFAMILY SSF53901 55 312 1.62E-14 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_07470 838061951be8bfa29cacef5d07a94d51 171 Gene3D G3DSA:3.40.50.300 5 161 8.4E-42 T 12-10-2018 N288_07470 838061951be8bfa29cacef5d07a94d51 171 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 6 133 2.4E-29 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 N288_07470 838061951be8bfa29cacef5d07a94d51 171 SUPERFAMILY SSF52540 4 135 3.33E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_07470 838061951be8bfa29cacef5d07a94d51 171 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 6 136 6.7E-27 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 N288_17730 afc02a6eeb16e77f2952f41c476a9d2d 331 SUPERFAMILY SSF52518 7 330 3.19E-103 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_17730 afc02a6eeb16e77f2952f41c476a9d2d 331 Pfam PF00676 Dehydrogenase E1 component 21 320 2.2E-107 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 N288_17730 afc02a6eeb16e77f2952f41c476a9d2d 331 Gene3D G3DSA:3.40.50.970 2 331 4.5E-119 T 12-10-2018 N288_18185 caa1ae20c39b3f39d08e8b1cf43f6bd8 177 Pfam PF02618 YceG-like family 113 176 2.0E-7 T 12-10-2018 IPR003770 Endolytic murein transglycosylase N288_18185 caa1ae20c39b3f39d08e8b1cf43f6bd8 177 Gene3D G3DSA:1.10.8.1150 110 177 4.5E-13 T 12-10-2018 N288_13370 a1a45a011902149a0ac296153ae71430 378 Pfam PF07730 Histidine kinase 179 242 2.6E-21 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 N288_13370 a1a45a011902149a0ac296153ae71430 378 SMART SM00387 278 369 5.4E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_13370 a1a45a011902149a0ac296153ae71430 378 SUPERFAMILY SSF55874 250 366 1.7E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_13370 a1a45a011902149a0ac296153ae71430 378 Gene3D G3DSA:3.30.565.10 243 368 1.8E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_13370 a1a45a011902149a0ac296153ae71430 378 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 282 366 1.9E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_22680 1f1af705ea501c63ecda0a98b5b29ecc 337 PIRSF PIRSF009290 1 337 5.3E-118 T 12-10-2018 IPR024713 Fructosamine deglycase FrlB N288_22680 1f1af705ea501c63ecda0a98b5b29ecc 337 SUPERFAMILY SSF53697 21 337 7.46E-56 T 12-10-2018 N288_22680 1f1af705ea501c63ecda0a98b5b29ecc 337 Gene3D G3DSA:3.40.50.10490 166 325 5.1E-53 T 12-10-2018 N288_22680 1f1af705ea501c63ecda0a98b5b29ecc 337 Pfam PF01380 SIS domain 38 141 2.2E-11 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 N288_22680 1f1af705ea501c63ecda0a98b5b29ecc 337 Gene3D G3DSA:3.40.50.10490 2 165 3.2E-39 T 12-10-2018 N288_06690 52c7e96444653ec5fdad6312f23bb594 67 Gene3D G3DSA:1.10.8.910 8 67 2.5E-30 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily N288_06690 52c7e96444653ec5fdad6312f23bb594 67 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 62 9.1E-21 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 N288_06690 52c7e96444653ec5fdad6312f23bb594 67 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 N288_06690 52c7e96444653ec5fdad6312f23bb594 67 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 N288_23765 84e14c3d55f54fcc32e693b619f3dba5 332 Pfam PF13800 Sigma factor regulator N-terminal 10 102 1.7E-22 T 12-10-2018 IPR029101 Sigma factor regulator, N-terminal N288_23765 84e14c3d55f54fcc32e693b619f3dba5 332 Pfam PF13791 Sigma factor regulator C-terminal 160 324 4.0E-34 T 12-10-2018 IPR025672 Sigma factor regulator C-terminal domain N288_11965 c4eb03c12fb47b853f12d387114622c2 429 SUPERFAMILY SSF54862 335 409 5.38E-14 T 12-10-2018 N288_11965 c4eb03c12fb47b853f12d387114622c2 429 Pfam PF01180 Dihydroorotate dehydrogenase 85 302 6.3E-30 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 N288_11965 c4eb03c12fb47b853f12d387114622c2 429 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 317 7.7E-57 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 N288_11965 c4eb03c12fb47b853f12d387114622c2 429 Pfam PF14697 4Fe-4S dicluster domain 335 397 5.8E-22 T 12-10-2018 N288_11965 c4eb03c12fb47b853f12d387114622c2 429 Gene3D G3DSA:3.30.70.20 306 415 1.4E-20 T 12-10-2018 N288_11965 c4eb03c12fb47b853f12d387114622c2 429 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 379 390 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site N288_11965 c4eb03c12fb47b853f12d387114622c2 429 Gene3D G3DSA:3.20.20.70 4 305 1.5E-103 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_11965 c4eb03c12fb47b853f12d387114622c2 429 SUPERFAMILY SSF51395 1 318 1.73E-71 T 12-10-2018 N288_17820 1815f7b43924e45d82790f87bad0bbfb 77 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 3 49 8.0E-12 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 N288_17820 1815f7b43924e45d82790f87bad0bbfb 77 Gene3D G3DSA:1.10.287.1040 2 77 2.6E-21 T 12-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 N288_17820 1815f7b43924e45d82790f87bad0bbfb 77 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 8 68 15.365 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 N288_17820 1815f7b43924e45d82790f87bad0bbfb 77 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 8 64 5.1E-23 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 N288_17820 1815f7b43924e45d82790f87bad0bbfb 77 SUPERFAMILY SSF116842 3 67 7.32E-21 T 12-10-2018 N288_17820 1815f7b43924e45d82790f87bad0bbfb 77 Pfam PF02609 Exonuclease VII small subunit 9 59 1.1E-21 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 N288_17820 1815f7b43924e45d82790f87bad0bbfb 77 PIRSF PIRSF006488 1 77 1.7E-19 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 N288_18015 9376246858bedc076698ffae0254bc6b 166 Gene3D G3DSA:3.40.50.300 2 165 1.7E-53 T 12-10-2018 N288_18015 9376246858bedc076698ffae0254bc6b 166 PRINTS PR01100 Shikimate kinase family signature 56 64 3.7E-25 T 12-10-2018 N288_18015 9376246858bedc076698ffae0254bc6b 166 PRINTS PR01100 Shikimate kinase family signature 4 19 3.7E-25 T 12-10-2018 N288_18015 9376246858bedc076698ffae0254bc6b 166 PRINTS PR01100 Shikimate kinase family signature 73 82 3.7E-25 T 12-10-2018 N288_18015 9376246858bedc076698ffae0254bc6b 166 PRINTS PR01100 Shikimate kinase family signature 94 111 3.7E-25 T 12-10-2018 N288_18015 9376246858bedc076698ffae0254bc6b 166 PRINTS PR01100 Shikimate kinase family signature 28 41 3.7E-25 T 12-10-2018 N288_18015 9376246858bedc076698ffae0254bc6b 166 SUPERFAMILY SSF52540 3 158 2.44E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_18015 9376246858bedc076698ffae0254bc6b 166 Pfam PF01202 Shikimate kinase 10 159 4.2E-48 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 N288_18015 9376246858bedc076698ffae0254bc6b 166 Hamap MF_00109 Shikimate kinase [aroK]. 1 165 28.067 T 12-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 N288_03170 4eb9de4ef07da9808cad4666bbb1fad1 492 SUPERFAMILY SSF75304 6 484 9.42E-116 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 N288_03170 4eb9de4ef07da9808cad4666bbb1fad1 492 ProSitePatterns PS00571 Amidases signature. 148 179 - T 12-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 N288_03170 4eb9de4ef07da9808cad4666bbb1fad1 492 Pfam PF01425 Amidase 26 475 3.9E-87 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 N288_03170 4eb9de4ef07da9808cad4666bbb1fad1 492 Gene3D G3DSA:3.90.1300.10 2 492 1.7E-150 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 N288_02725 da0974c7cce052110d280f693d9522da 182 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 12-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 N288_02725 da0974c7cce052110d280f693d9522da 182 PIRSF PIRSF000303 1 182 4.0E-62 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 N288_02725 da0974c7cce052110d280f693d9522da 182 SUPERFAMILY SSF52833 1 181 3.16E-61 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_02725 da0974c7cce052110d280f693d9522da 182 Pfam PF00255 Glutathione peroxidase 3 109 2.5E-42 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 N288_02725 da0974c7cce052110d280f693d9522da 182 Gene3D G3DSA:3.40.30.10 1 182 2.6E-72 T 12-10-2018 N288_02725 da0974c7cce052110d280f693d9522da 182 PRINTS PR01011 Glutathione peroxidase family signature 56 72 7.0E-21 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 N288_02725 da0974c7cce052110d280f693d9522da 182 PRINTS PR01011 Glutathione peroxidase family signature 145 154 7.0E-21 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 N288_02725 da0974c7cce052110d280f693d9522da 182 PRINTS PR01011 Glutathione peroxidase family signature 21 38 7.0E-21 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 N288_02725 da0974c7cce052110d280f693d9522da 182 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 12-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 N288_06070 fbee881f5cadb12388b3b4685739ab0b 123 Gene3D G3DSA:3.40.50.12740 2 123 5.5E-37 T 12-10-2018 N288_06070 fbee881f5cadb12388b3b4685739ab0b 123 SUPERFAMILY SSF52172 2 120 1.99E-34 T 12-10-2018 IPR011006 CheY-like superfamily N288_06070 fbee881f5cadb12388b3b4685739ab0b 123 SMART SM00448 2 115 1.4E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_06070 fbee881f5cadb12388b3b4685739ab0b 123 Pfam PF00072 Response regulator receiver domain 4 115 1.5E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_02555 74c46d7c8d14badff4d3c661f73ceb7c 427 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 24 366 6.8E-130 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase N288_02555 74c46d7c8d14badff4d3c661f73ceb7c 427 Pfam PF08388 Group II intron, maturase-specific domain 302 379 1.7E-17 T 12-10-2018 IPR013597 Group II intron, maturase-specific N288_02555 74c46d7c8d14badff4d3c661f73ceb7c 427 SUPERFAMILY SSF56672 29 377 4.39E-60 T 12-10-2018 N288_02555 74c46d7c8d14badff4d3c661f73ceb7c 427 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 201 214 4.5E-7 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 N288_02555 74c46d7c8d14badff4d3c661f73ceb7c 427 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 143 161 4.5E-7 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 N288_02555 74c46d7c8d14badff4d3c661f73ceb7c 427 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 75 88 4.5E-7 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 N288_02555 74c46d7c8d14badff4d3c661f73ceb7c 427 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 80 286 5.8E-47 T 12-10-2018 IPR000477 Reverse transcriptase domain N288_02125 0ebf4c0b7f0f56782bbd649bfefdd656 329 SUPERFAMILY SSF53822 71 322 6.28E-48 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_02125 0ebf4c0b7f0f56782bbd649bfefdd656 329 Gene3D G3DSA:3.40.50.2300 155 289 1.3E-48 T 12-10-2018 N288_02125 0ebf4c0b7f0f56782bbd649bfefdd656 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.4E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_02125 0ebf4c0b7f0f56782bbd649bfefdd656 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.4E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_02125 0ebf4c0b7f0f56782bbd649bfefdd656 329 SMART SM00354 1 69 8.6E-10 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_02125 0ebf4c0b7f0f56782bbd649bfefdd656 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.0E-15 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_02125 0ebf4c0b7f0f56782bbd649bfefdd656 329 Pfam PF13377 Periplasmic binding protein-like domain 163 328 6.0E-32 T 12-10-2018 N288_02125 0ebf4c0b7f0f56782bbd649bfefdd656 329 SUPERFAMILY SSF47413 3 51 5.25E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_02125 0ebf4c0b7f0f56782bbd649bfefdd656 329 Gene3D G3DSA:3.40.50.2300 72 312 1.3E-48 T 12-10-2018 N288_02125 0ebf4c0b7f0f56782bbd649bfefdd656 329 Gene3D G3DSA:1.10.260.40 1 47 5.4E-17 T 12-10-2018 N288_00425 a40381f2b0f405df5d2b7cb90a761cfe 462 Pfam PF01171 PP-loop family 21 206 9.2E-57 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 N288_00425 a40381f2b0f405df5d2b7cb90a761cfe 462 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 384 429 5.9E-20 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 N288_00425 a40381f2b0f405df5d2b7cb90a761cfe 462 Gene3D G3DSA:3.40.50.620 3 130 4.8E-38 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_00425 a40381f2b0f405df5d2b7cb90a761cfe 462 SUPERFAMILY SSF56037 337 454 5.23E-19 T 12-10-2018 N288_00425 a40381f2b0f405df5d2b7cb90a761cfe 462 Pfam PF09179 TilS substrate binding domain 260 324 5.8E-6 T 12-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 N288_00425 a40381f2b0f405df5d2b7cb90a761cfe 462 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 15 320 24.37 T 12-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 N288_00425 a40381f2b0f405df5d2b7cb90a761cfe 462 SUPERFAMILY SSF52402 11 239 4.92E-59 T 12-10-2018 N288_00425 a40381f2b0f405df5d2b7cb90a761cfe 462 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 209 4.0E-58 T 12-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 N288_00425 a40381f2b0f405df5d2b7cb90a761cfe 462 Pfam PF11734 TilS substrate C-terminal domain 385 444 6.8E-15 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 N288_00425 a40381f2b0f405df5d2b7cb90a761cfe 462 SUPERFAMILY SSF82829 216 325 2.3E-12 T 12-10-2018 N288_00425 a40381f2b0f405df5d2b7cb90a761cfe 462 Gene3D G3DSA:1.20.59.30 246 331 8.5E-30 T 12-10-2018 N288_00425 a40381f2b0f405df5d2b7cb90a761cfe 462 Gene3D G3DSA:1.10.10.1360 131 217 5.5E-28 T 12-10-2018 N288_00425 a40381f2b0f405df5d2b7cb90a761cfe 462 SMART SM00977 384 457 2.5E-21 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 N288_09710 161df11811aa89d7fc2e2e00fd926336 438 SMART SM00382 157 338 8.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_09710 161df11811aa89d7fc2e2e00fd926336 438 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 23 87 5.7E-7 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_09710 161df11811aa89d7fc2e2e00fd926336 438 SUPERFAMILY SSF52540 92 360 9.41E-96 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_09710 161df11811aa89d7fc2e2e00fd926336 438 TIGRFAM TIGR03497 FliI_clade2: flagellar protein export ATPase FliI 20 432 3.9E-206 T 12-10-2018 IPR022425 Flagellar export ATPase FliI, clade 2 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_09710 161df11811aa89d7fc2e2e00fd926336 438 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 145 354 6.2E-75 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_09710 161df11811aa89d7fc2e2e00fd926336 438 Gene3D G3DSA:3.40.50.12240 10 437 1.7E-153 T 12-10-2018 N288_09710 161df11811aa89d7fc2e2e00fd926336 438 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 345 354 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_09710 161df11811aa89d7fc2e2e00fd926336 438 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 7 434 2.1E-196 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 N288_22315 8827498b526ed776b9d1d51f86a49fc4 502 Pfam PF00561 alpha/beta hydrolase fold 22 125 1.4E-11 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_22315 8827498b526ed776b9d1d51f86a49fc4 502 SUPERFAMILY SSF53474 9 252 2.47E-35 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_22315 8827498b526ed776b9d1d51f86a49fc4 502 Gene3D G3DSA:3.40.50.1820 1 254 7.3E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_22315 8827498b526ed776b9d1d51f86a49fc4 502 Gene3D G3DSA:1.10.10.10 286 377 2.8E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_22315 8827498b526ed776b9d1d51f86a49fc4 502 SUPERFAMILY SSF46894 312 369 2.89E-5 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_07590 e201e577928c4e7bf122a6fe25ba3df2 321 Gene3D G3DSA:1.10.3720.10 85 313 1.5E-21 T 12-10-2018 IPR035906 MetI-like superfamily N288_07590 e201e577928c4e7bf122a6fe25ba3df2 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 319 8.1E-46 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_07590 e201e577928c4e7bf122a6fe25ba3df2 321 SUPERFAMILY SSF161098 92 307 1.31E-19 T 12-10-2018 IPR035906 MetI-like superfamily N288_03655 8a61ff711b6e116b645f0b2a22ac6368 197 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 51 66 2.6E-7 T 12-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 N288_03655 8a61ff711b6e116b645f0b2a22ac6368 197 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 111 122 2.6E-7 T 12-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 N288_03655 8a61ff711b6e116b645f0b2a22ac6368 197 TIGRFAM TIGR02228 sigpep_I_arch: signal peptidase I 11 173 5.4E-45 T 12-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 N288_03655 8a61ff711b6e116b645f0b2a22ac6368 197 SUPERFAMILY SSF51306 44 119 7.06E-9 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily N288_03655 8a61ff711b6e116b645f0b2a22ac6368 197 ProSitePatterns PS00501 Signal peptidases I serine active site. 53 60 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 N288_03655 8a61ff711b6e116b645f0b2a22ac6368 197 Pfam PF00717 Peptidase S24-like 50 111 1.5E-9 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C N288_24765 8b5de43797ea2d7f6a1b0797b72ce8fc 150 Pfam PF03713 Domain of unknown function (DUF305) 93 148 6.1E-11 T 12-10-2018 IPR005183 Domain of unknown function DUF305 N288_24765 8b5de43797ea2d7f6a1b0797b72ce8fc 150 Gene3D G3DSA:1.20.1260.10 90 150 1.4E-11 T 12-10-2018 IPR012347 Ferritin-like N288_19455 a098ae7e9e784046b4769b3787beda20 345 Gene3D G3DSA:3.30.930.10 8 344 1.8E-127 T 12-10-2018 N288_19455 a098ae7e9e784046b4769b3787beda20 345 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 88 1.0E-26 T 12-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 N288_19455 a098ae7e9e784046b4769b3787beda20 345 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 341 49.601 T 12-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 N288_19455 a098ae7e9e784046b4769b3787beda20 345 SUPERFAMILY SSF46589 15 99 5.75E-23 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 N288_19455 a098ae7e9e784046b4769b3787beda20 345 SUPERFAMILY SSF55681 93 342 1.14E-83 T 12-10-2018 N288_19455 a098ae7e9e784046b4769b3787beda20 345 Pfam PF01409 tRNA synthetases class II core domain (F) 93 341 4.0E-109 T 12-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 N288_19455 a098ae7e9e784046b4769b3787beda20 345 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 342 6.5E-114 T 12-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 N288_00865 7daf4c47f7f7eb87b15e0b26d32f1de9 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 1.0E-8 T 12-10-2018 N288_00865 7daf4c47f7f7eb87b15e0b26d32f1de9 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 9.2E-24 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00865 7daf4c47f7f7eb87b15e0b26d32f1de9 37 SUPERFAMILY SSF57840 1 37 6.41E-17 T 12-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00865 7daf4c47f7f7eb87b15e0b26d32f1de9 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00865 7daf4c47f7f7eb87b15e0b26d32f1de9 37 Pfam PF00444 Ribosomal protein L36 1 37 5.7E-19 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00865 7daf4c47f7f7eb87b15e0b26d32f1de9 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.778 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18075 077bab690610c4f2d4fc7a7657cc475b 354 SUPERFAMILY SSF53335 13 350 3.32E-74 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_18075 077bab690610c4f2d4fc7a7657cc475b 354 Gene3D G3DSA:3.40.50.12710 2 353 1.8E-91 T 12-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 N288_18075 077bab690610c4f2d4fc7a7657cc475b 354 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 62 282 1.5E-35 T 12-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 N288_24470 f16170b391094481887536841f78f48a 205 Pfam PF12804 MobA-like NTP transferase domain 5 169 1.9E-33 T 12-10-2018 IPR025877 MobA-like NTP transferase N288_24470 f16170b391094481887536841f78f48a 205 Gene3D G3DSA:3.90.550.10 1 202 2.5E-44 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_24470 f16170b391094481887536841f78f48a 205 SUPERFAMILY SSF53448 1 197 2.82E-24 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_06085 70088bfe1722e7e36ee2cc14bffde5dd 248 SUPERFAMILY SSF53335 18 243 2.79E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_06085 70088bfe1722e7e36ee2cc14bffde5dd 248 Gene3D G3DSA:2.20.25.570 140 203 1.6E-57 T 12-10-2018 N288_06085 70088bfe1722e7e36ee2cc14bffde5dd 248 Gene3D G3DSA:3.40.50.150 36 236 1.6E-57 T 12-10-2018 N288_06085 70088bfe1722e7e36ee2cc14bffde5dd 248 Pfam PF13649 Methyltransferase domain 39 132 1.1E-16 T 12-10-2018 N288_01250 6610c045fb6d719f418c931d2505b209 285 Pfam PF01925 Sulfite exporter TauE/SafE 7 245 2.2E-44 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 N288_20250 fe07e7cdd95d9c76f916b84a4d62861f 198 Gene3D G3DSA:1.20.120.80 13 198 1.1E-50 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20250 fe07e7cdd95d9c76f916b84a4d62861f 198 TIGRFAM TIGR02897 QoxC: cytochrome aa3 quinol oxidase, subunit III 11 197 1.8E-72 T 12-10-2018 IPR014246 Quinol oxidase subunit III GO:0015002|GO:0016021|GO:0042773 N288_20250 fe07e7cdd95d9c76f916b84a4d62861f 198 SUPERFAMILY SSF81452 17 195 9.42E-51 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_20250 fe07e7cdd95d9c76f916b84a4d62861f 198 Pfam PF00510 Cytochrome c oxidase subunit III 21 196 5.7E-16 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_08370 7418ead4358db252ab5a1d62821625aa 194 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 4.0E-7 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_08370 7418ead4358db252ab5a1d62821625aa 194 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 4.0E-7 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_08370 7418ead4358db252ab5a1d62821625aa 194 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 4.0E-7 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_08370 7418ead4358db252ab5a1d62821625aa 194 Gene3D G3DSA:1.10.10.10 1 102 5.0E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_08370 7418ead4358db252ab5a1d62821625aa 194 Pfam PF01022 Bacterial regulatory protein, arsR family 15 54 1.1E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_08370 7418ead4358db252ab5a1d62821625aa 194 SMART SM00418 8 86 2.2E-11 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_08370 7418ead4358db252ab5a1d62821625aa 194 SUPERFAMILY SSF46785 1 191 3.08E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_08370 7418ead4358db252ab5a1d62821625aa 194 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 118 183 2.5E-21 T 12-10-2018 IPR018656 Domain of unknown function DUF2087 N288_14620 bb225adfd74953c03b4fee8024e85b37 353 Gene3D G3DSA:2.50.20.10 24 217 5.8E-17 T 12-10-2018 N288_14620 bb225adfd74953c03b4fee8024e85b37 353 SUPERFAMILY SSF89392 55 224 5.49E-11 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX N288_18880 6ebb60de875585417bd9302b65291697 129 Pfam PF12670 Protein of unknown function (DUF3792) 9 119 3.5E-25 T 12-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane N288_18880 6ebb60de875585417bd9302b65291697 129 TIGRFAM TIGR04086 TIGR04086_membr: putative membrane protein, TIGR04086 family 10 122 2.8E-29 T 12-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane N288_16505 6c47561fedea7774c59b722f5e3ebf0b 226 SUPERFAMILY SSF53335 10 188 2.19E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_16505 6c47561fedea7774c59b722f5e3ebf0b 226 Gene3D G3DSA:3.40.50.150 25 226 6.9E-51 T 12-10-2018 N288_16505 6c47561fedea7774c59b722f5e3ebf0b 226 Pfam PF08241 Methyltransferase domain 52 141 8.6E-22 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 N288_09565 1ca0e29ce14de98baa6844e6c208c374 110 Hamap MF_00245 UPF0122 protein . 2 103 21.447 T 12-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like N288_09565 1ca0e29ce14de98baa6844e6c208c374 110 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 2 89 2.0E-40 T 12-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like N288_09565 1ca0e29ce14de98baa6844e6c208c374 110 Gene3D G3DSA:1.10.10.10 1 110 1.9E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_09565 1ca0e29ce14de98baa6844e6c208c374 110 SUPERFAMILY SSF88659 1 97 2.62E-35 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_09115 9629012ef76ee6ca07fc0a9855a68f4e 70 SUPERFAMILY SSF51230 3 70 2.09E-20 T 12-10-2018 IPR011053 Single hybrid motif N288_09115 9629012ef76ee6ca07fc0a9855a68f4e 70 Pfam PF00364 Biotin-requiring enzyme 2 69 6.6E-18 T 12-10-2018 IPR000089 Biotin/lipoyl attachment N288_09115 9629012ef76ee6ca07fc0a9855a68f4e 70 Gene3D G3DSA:2.40.50.100 3 70 9.6E-23 T 12-10-2018 N288_11180 ed16bb821a9d224a156887709dc7c2ac 141 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 119 9.7E-21 T 12-10-2018 N288_11180 ed16bb821a9d224a156887709dc7c2ac 141 Gene3D G3DSA:3.10.180.10 3 134 2.9E-34 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_11180 ed16bb821a9d224a156887709dc7c2ac 141 SUPERFAMILY SSF54593 5 138 1.65E-27 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_15435 44cad6d9513c264b84bab86473cecbe2 148 Pfam PF01037 Lrp/AsnC ligand binding domain 70 139 5.7E-10 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain N288_15435 44cad6d9513c264b84bab86473cecbe2 148 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 1.4E-8 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 N288_15435 44cad6d9513c264b84bab86473cecbe2 148 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 1.4E-8 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 N288_15435 44cad6d9513c264b84bab86473cecbe2 148 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 1.4E-8 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 N288_15435 44cad6d9513c264b84bab86473cecbe2 148 SMART SM00344 5 110 3.7E-23 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 N288_15435 44cad6d9513c264b84bab86473cecbe2 148 Gene3D G3DSA:1.10.10.10 1 54 8.5E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_15435 44cad6d9513c264b84bab86473cecbe2 148 Pfam PF13404 AsnC-type helix-turn-helix domain 5 45 2.3E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 N288_15435 44cad6d9513c264b84bab86473cecbe2 148 Gene3D G3DSA:3.30.70.920 56 147 4.0E-15 T 12-10-2018 N288_15435 44cad6d9513c264b84bab86473cecbe2 148 SUPERFAMILY SSF54909 68 144 8.04E-12 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel N288_15435 44cad6d9513c264b84bab86473cecbe2 148 SUPERFAMILY SSF46785 3 63 3.1E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_10510 e37c631ab670cdf37bae98ba037ea32d 426 Pfam PF13416 Bacterial extracellular solute-binding protein 57 358 1.6E-33 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein N288_10510 e37c631ab670cdf37bae98ba037ea32d 426 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 148 165 - T 12-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 N288_10510 e37c631ab670cdf37bae98ba037ea32d 426 SUPERFAMILY SSF53850 19 422 7.39E-72 T 12-10-2018 N288_10510 e37c631ab670cdf37bae98ba037ea32d 426 Gene3D G3DSA:3.40.190.10 153 415 1.1E-86 T 12-10-2018 N288_10510 e37c631ab670cdf37bae98ba037ea32d 426 Gene3D G3DSA:3.40.190.10 53 382 1.1E-86 T 12-10-2018 N288_03415 54c54169e629058ea2d9f1895d956aa3 114 Pfam PF11588 Protein of unknown function (DUF3243) 34 110 1.8E-28 T 12-10-2018 IPR021637 Protein of unknown function DUF3243 N288_03415 54c54169e629058ea2d9f1895d956aa3 114 Gene3D G3DSA:1.10.760.20 30 112 2.1E-29 T 12-10-2018 IPR038292 YmfJ/YflH superfamily N288_21345 53fc6ed75e276e88e432058e90fafd06 243 Pfam PF00929 Exonuclease 60 217 3.4E-25 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III N288_21345 53fc6ed75e276e88e432058e90fafd06 243 Gene3D G3DSA:3.30.420.10 54 228 2.2E-40 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 N288_21345 53fc6ed75e276e88e432058e90fafd06 243 SUPERFAMILY SSF53098 50 231 1.82E-43 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily N288_21345 53fc6ed75e276e88e432058e90fafd06 243 SMART SM00479 58 227 3.4E-33 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III N288_10245 97e47a52e4c850f5ddb9a0016aabd117 77 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 29.862 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 N288_10245 97e47a52e4c850f5ddb9a0016aabd117 77 Gene3D G3DSA:2.30.30.100 1 74 4.2E-34 T 12-10-2018 N288_10245 97e47a52e4c850f5ddb9a0016aabd117 77 Pfam PF17209 Hfq protein 7 69 2.4E-32 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 N288_10245 97e47a52e4c850f5ddb9a0016aabd117 77 SUPERFAMILY SSF50182 6 64 1.72E-23 T 12-10-2018 IPR010920 LSM domain superfamily N288_10245 97e47a52e4c850f5ddb9a0016aabd117 77 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 65 6.8E-32 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 N288_22745 235e6411a82b59c36e45bb4fa052d6cb 146 Pfam PF06923 Glucitol operon activator protein (GutM) 5 110 1.7E-39 T 12-10-2018 IPR009693 Glucitol operon activator N288_22745 235e6411a82b59c36e45bb4fa052d6cb 146 PIRSF PIRSF011474 1 145 2.6E-50 T 12-10-2018 IPR009693 Glucitol operon activator N288_18600 eabbaf0ea9e14cce957a3dcb53737cc4 46 SUPERFAMILY SSF100985 1 45 9.68E-18 T 12-10-2018 IPR036916 Sporulation inhibitor A superfamily N288_18600 eabbaf0ea9e14cce957a3dcb53737cc4 46 Pfam PF08970 Sporulation inhibitor A 1 44 3.3E-25 T 12-10-2018 IPR015064 Sporulation inhibitor A N288_18600 eabbaf0ea9e14cce957a3dcb53737cc4 46 Gene3D G3DSA:1.10.287.1100 4 37 5.6E-21 T 12-10-2018 IPR036916 Sporulation inhibitor A superfamily N288_11140 eff678cb09b2f69a01fc419b0fced824 419 SUPERFAMILY SSF103473 17 401 9.68E-35 T 12-10-2018 IPR036259 MFS transporter superfamily N288_11140 eff678cb09b2f69a01fc419b0fced824 419 Pfam PF07690 Major Facilitator Superfamily 276 408 3.2E-8 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_11140 eff678cb09b2f69a01fc419b0fced824 419 Pfam PF07690 Major Facilitator Superfamily 22 246 3.2E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_11140 eff678cb09b2f69a01fc419b0fced824 419 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 85 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_11140 eff678cb09b2f69a01fc419b0fced824 419 Gene3D G3DSA:1.20.1250.20 16 202 8.0E-21 T 12-10-2018 N288_11140 eff678cb09b2f69a01fc419b0fced824 419 Gene3D G3DSA:1.20.1250.20 212 412 2.4E-10 T 12-10-2018 N288_17805 6dda0c991334a56959f89d217073611d 630 SUPERFAMILY SSF52518 15 344 5.9E-71 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_17805 6dda0c991334a56959f89d217073611d 630 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 N288_17805 6dda0c991334a56959f89d217073611d 630 SUPERFAMILY SSF52922 489 621 1.19E-30 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 N288_17805 6dda0c991334a56959f89d217073611d 630 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 4 620 4.3E-291 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 N288_17805 6dda0c991334a56959f89d217073611d 630 Gene3D G3DSA:3.40.50.970 316 488 1.0E-64 T 12-10-2018 N288_17805 6dda0c991334a56959f89d217073611d 630 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 2 624 44.498 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 N288_17805 6dda0c991334a56959f89d217073611d 630 Gene3D G3DSA:3.40.50.920 493 628 3.1E-38 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 N288_17805 6dda0c991334a56959f89d217073611d 630 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 5 278 7.2E-118 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 N288_17805 6dda0c991334a56959f89d217073611d 630 Pfam PF02780 Transketolase, C-terminal domain 493 613 1.2E-31 T 12-10-2018 IPR033248 Transketolase, C-terminal domain N288_17805 6dda0c991334a56959f89d217073611d 630 ProSitePatterns PS00801 Transketolase signature 1. 28 47 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 N288_17805 6dda0c991334a56959f89d217073611d 630 SMART SM00861 316 481 4.4E-63 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain N288_17805 6dda0c991334a56959f89d217073611d 630 Pfam PF02779 Transketolase, pyrimidine binding domain 316 477 1.1E-38 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain N288_17805 6dda0c991334a56959f89d217073611d 630 SUPERFAMILY SSF52518 305 477 1.87E-57 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_19460 1342c87a94b2b41732bf867f75db7b07 249 Pfam PF00588 SpoU rRNA Methylase family 107 245 1.9E-37 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 N288_19460 1342c87a94b2b41732bf867f75db7b07 249 Gene3D G3DSA:3.30.1330.30 2 96 1.1E-23 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like N288_19460 1342c87a94b2b41732bf867f75db7b07 249 SUPERFAMILY SSF75217 92 247 1.37E-41 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases N288_19460 1342c87a94b2b41732bf867f75db7b07 249 SMART SM00967 31 99 2.8E-12 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 N288_19460 1342c87a94b2b41732bf867f75db7b07 249 SUPERFAMILY SSF55315 2 94 2.47E-24 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like N288_19460 1342c87a94b2b41732bf867f75db7b07 249 Gene3D G3DSA:3.40.1280.10 97 249 1.2E-51 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal N288_19460 1342c87a94b2b41732bf867f75db7b07 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 31 97 2.1E-9 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 N288_11320 cfd22a02bf75a4b02b89b131bc23d489 587 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 536 552 - T 12-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 N288_11320 cfd22a02bf75a4b02b89b131bc23d489 587 Pfam PF02080 TrkA-C domain 308 366 2.3E-7 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 N288_11320 cfd22a02bf75a4b02b89b131bc23d489 587 Pfam PF02080 TrkA-C domain 220 279 1.9E-8 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 N288_11320 cfd22a02bf75a4b02b89b131bc23d489 587 SUPERFAMILY SSF116726 304 368 3.27E-12 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 N288_11320 cfd22a02bf75a4b02b89b131bc23d489 587 Gene3D G3DSA:3.30.70.1450 307 369 3.1E-11 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 N288_11320 cfd22a02bf75a4b02b89b131bc23d489 587 Pfam PF03600 Citrate transporter 17 532 1.2E-37 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 N288_11320 cfd22a02bf75a4b02b89b131bc23d489 587 Gene3D G3DSA:3.30.70.1450 214 286 1.3E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 N288_11320 cfd22a02bf75a4b02b89b131bc23d489 587 SUPERFAMILY SSF116726 206 291 1.44E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 N288_25040 8c4dc488e51245f6e89c5ef3c1c87b3d 243 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 3.0E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_25040 8c4dc488e51245f6e89c5ef3c1c87b3d 243 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 3.0E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_25040 8c4dc488e51245f6e89c5ef3c1c87b3d 243 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 3.0E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_25040 8c4dc488e51245f6e89c5ef3c1c87b3d 243 Pfam PF00561 alpha/beta hydrolase fold 33 150 3.8E-12 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_25040 8c4dc488e51245f6e89c5ef3c1c87b3d 243 SUPERFAMILY SSF53474 3 237 9.2E-33 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_25040 8c4dc488e51245f6e89c5ef3c1c87b3d 243 Gene3D G3DSA:3.40.50.1820 14 238 7.2E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_00375 306a893a9b21c3e9c36b0cbbc835e3a3 89 PIRSF PIRSF038881 1 89 4.2E-31 T 12-10-2018 IPR025490 RNA-binding protein, HP1423 type N288_00375 306a893a9b21c3e9c36b0cbbc835e3a3 89 Pfam PF01479 S4 domain 1 47 7.5E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00375 306a893a9b21c3e9c36b0cbbc835e3a3 89 SMART SM00363 1 61 4.4E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00375 306a893a9b21c3e9c36b0cbbc835e3a3 89 SUPERFAMILY SSF55174 1 77 9.55E-21 T 12-10-2018 N288_00375 306a893a9b21c3e9c36b0cbbc835e3a3 89 Gene3D G3DSA:3.10.290.10 1 89 3.2E-25 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 N288_10350 c4c3f23711f38d4b9d3d36bf7bfb97d2 79 Hamap MF_01103 UPF0291 protein . 2 60 15.354 T 12-10-2018 IPR009242 Protein of unknown function DUF896 N288_10350 c4c3f23711f38d4b9d3d36bf7bfb97d2 79 Pfam PF05979 Bacterial protein of unknown function (DUF896) 6 68 2.5E-30 T 12-10-2018 IPR009242 Protein of unknown function DUF896 N288_10350 c4c3f23711f38d4b9d3d36bf7bfb97d2 79 Gene3D G3DSA:1.10.287.540 1 57 5.2E-22 T 12-10-2018 N288_10350 c4c3f23711f38d4b9d3d36bf7bfb97d2 79 SUPERFAMILY SSF158221 1 42 1.31E-13 T 12-10-2018 N288_09270 723c14a711ef7db85564172eff4bad31 223 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 3 223 3.6E-52 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 N288_09270 723c14a711ef7db85564172eff4bad31 223 SUPERFAMILY SSF51419 2 222 9.32E-71 T 12-10-2018 IPR029066 PLP-binding barrel N288_09270 723c14a711ef7db85564172eff4bad31 223 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 223 27.868 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 N288_09270 723c14a711ef7db85564172eff4bad31 223 PIRSF PIRSF004848 1 223 1.3E-65 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 N288_09270 723c14a711ef7db85564172eff4bad31 223 Pfam PF01168 Alanine racemase, N-terminal domain 7 222 2.1E-17 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 N288_09270 723c14a711ef7db85564172eff4bad31 223 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 74 88 - T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 N288_09270 723c14a711ef7db85564172eff4bad31 223 Gene3D G3DSA:3.20.20.10 1 223 5.8E-75 T 12-10-2018 IPR029066 PLP-binding barrel N288_24615 b9741f09b8db5c33d63fbab6d4f34209 378 Gene3D G3DSA:3.90.180.10 4 365 1.6E-129 T 12-10-2018 N288_24615 b9741f09b8db5c33d63fbab6d4f34209 378 SUPERFAMILY SSF51735 157 340 1.77E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_24615 b9741f09b8db5c33d63fbab6d4f34209 378 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 139 2.7E-29 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 N288_24615 b9741f09b8db5c33d63fbab6d4f34209 378 Gene3D G3DSA:3.40.50.720 169 338 1.6E-129 T 12-10-2018 N288_24615 b9741f09b8db5c33d63fbab6d4f34209 378 SUPERFAMILY SSF50129 1 186 6.99E-62 T 12-10-2018 IPR011032 GroES-like superfamily N288_24615 b9741f09b8db5c33d63fbab6d4f34209 378 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 N288_24615 b9741f09b8db5c33d63fbab6d4f34209 378 Pfam PF00107 Zinc-binding dehydrogenase 189 257 2.5E-9 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 N288_24615 b9741f09b8db5c33d63fbab6d4f34209 378 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 1.6E-13 T 12-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated N288_02835 9e8724b6032dd044316f8d4e05c16b7b 201 Gene3D G3DSA:3.40.50.12740 2 200 1.1E-56 T 12-10-2018 N288_02835 9e8724b6032dd044316f8d4e05c16b7b 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 139 192 2.2E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_02835 9e8724b6032dd044316f8d4e05c16b7b 201 SUPERFAMILY SSF52172 1 128 7.54E-28 T 12-10-2018 IPR011006 CheY-like superfamily N288_02835 9e8724b6032dd044316f8d4e05c16b7b 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 3.9E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_02835 9e8724b6032dd044316f8d4e05c16b7b 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 3.9E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_02835 9e8724b6032dd044316f8d4e05c16b7b 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 3.9E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_02835 9e8724b6032dd044316f8d4e05c16b7b 201 SMART SM00448 2 115 1.2E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_02835 9e8724b6032dd044316f8d4e05c16b7b 201 SMART SM00421 137 194 4.3E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_02835 9e8724b6032dd044316f8d4e05c16b7b 201 SUPERFAMILY SSF46894 126 200 2.31E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_02835 9e8724b6032dd044316f8d4e05c16b7b 201 Pfam PF00072 Response regulator receiver domain 6 115 2.5E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_22495 9a1413e484f3c2b937c7266936c1b44d 449 Gene3D G3DSA:3.90.550.10 26 296 2.1E-44 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_22495 9a1413e484f3c2b937c7266936c1b44d 449 SUPERFAMILY SSF53448 38 336 4.42E-49 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_22495 9a1413e484f3c2b937c7266936c1b44d 449 Pfam PF13641 Glycosyltransferase like family 2 44 304 8.8E-23 T 12-10-2018 N288_03405 41eff51b038e2d67ce9c6ee484aec57b 153 SUPERFAMILY SSF55729 4 143 1.52E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_03405 41eff51b038e2d67ce9c6ee484aec57b 153 Gene3D G3DSA:3.40.630.30 4 153 9.5E-36 T 12-10-2018 N288_03405 41eff51b038e2d67ce9c6ee484aec57b 153 Pfam PF00583 Acetyltransferase (GNAT) family 42 142 3.2E-14 T 12-10-2018 IPR000182 GNAT domain N288_02145 d7fc4513977bcceeef110eec8e90e2c9 348 PIRSF PIRSF005096 1 348 1.4E-136 T 12-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 N288_02145 d7fc4513977bcceeef110eec8e90e2c9 348 SUPERFAMILY SSF74650 9 346 9.42E-119 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 N288_02145 d7fc4513977bcceeef110eec8e90e2c9 348 Pfam PF01263 Aldose 1-epimerase 19 344 8.2E-98 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 N288_02145 d7fc4513977bcceeef110eec8e90e2c9 348 Gene3D G3DSA:2.70.98.10 7 348 5.5E-126 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 N288_02145 d7fc4513977bcceeef110eec8e90e2c9 348 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 175 184 - T 12-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 N288_10805 1b396a0c06eebec77fbd4bd2b2116cfd 276 PIRSF PIRSF006625 1 276 7.0E-140 T 12-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 N288_10805 1b396a0c06eebec77fbd4bd2b2116cfd 276 SUPERFAMILY SSF51182 1 260 9.37E-111 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily N288_10805 1b396a0c06eebec77fbd4bd2b2116cfd 276 Pfam PF04962 KduI/IolB family 33 271 2.4E-32 T 12-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 N288_10805 1b396a0c06eebec77fbd4bd2b2116cfd 276 Gene3D G3DSA:2.60.120.520 30 142 1.2E-122 T 12-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 N288_10805 1b396a0c06eebec77fbd4bd2b2116cfd 276 Gene3D G3DSA:2.60.120.10 10 261 1.2E-122 T 12-10-2018 IPR014710 RmlC-like jelly roll fold N288_10805 1b396a0c06eebec77fbd4bd2b2116cfd 276 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 276 57.033 T 12-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 N288_19040 9120725dee8f7c4b8be70e232f2c221d 174 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 7 158 5.5E-27 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 N288_19040 9120725dee8f7c4b8be70e232f2c221d 174 Pfam PF04093 rod shape-determining protein MreD 2 164 1.0E-30 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 N288_02485 2a7814e97b147d2e274b4d5a46f49184 315 Gene3D G3DSA:3.40.50.720 1 148 9.2E-60 T 12-10-2018 N288_02485 2a7814e97b147d2e274b4d5a46f49184 315 SUPERFAMILY SSF51735 4 146 3.54E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_02485 2a7814e97b147d2e274b4d5a46f49184 315 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 149 312 3.2E-37 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 N288_02485 2a7814e97b147d2e274b4d5a46f49184 315 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 6 315 46.942 T 12-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 N288_02485 2a7814e97b147d2e274b4d5a46f49184 315 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 176 182 - T 12-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 N288_02485 2a7814e97b147d2e274b4d5a46f49184 315 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 8 146 6.3E-49 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 N288_02485 2a7814e97b147d2e274b4d5a46f49184 315 SUPERFAMILY SSF56327 147 312 4.76E-55 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 N288_02485 2a7814e97b147d2e274b4d5a46f49184 315 Gene3D G3DSA:3.90.110.10 149 315 4.3E-61 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 N288_02485 2a7814e97b147d2e274b4d5a46f49184 315 PIRSF PIRSF000102 3 314 1.1E-113 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 N288_02485 2a7814e97b147d2e274b4d5a46f49184 315 PRINTS PR00086 L-lactate dehydrogenase signature 120 140 1.5E-47 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 N288_02485 2a7814e97b147d2e274b4d5a46f49184 315 PRINTS PR00086 L-lactate dehydrogenase signature 8 32 1.5E-47 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 N288_02485 2a7814e97b147d2e274b4d5a46f49184 315 PRINTS PR00086 L-lactate dehydrogenase signature 174 187 1.5E-47 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 N288_02485 2a7814e97b147d2e274b4d5a46f49184 315 PRINTS PR00086 L-lactate dehydrogenase signature 144 162 1.5E-47 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 N288_02485 2a7814e97b147d2e274b4d5a46f49184 315 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 1.5E-47 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 N288_02485 2a7814e97b147d2e274b4d5a46f49184 315 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 11 309 7.4E-131 T 12-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 N288_14060 ed5f51e4ec6c788aae30c6d57dc7613c 258 Pfam PF03567 Sulfotransferase family 22 253 1.0E-10 T 12-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 N288_24215 1f6fb1a9f1f5746b8cb77029479ba70c 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 223 1.9E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24215 1f6fb1a9f1f5746b8cb77029479ba70c 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 143 1.9E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24215 1f6fb1a9f1f5746b8cb77029479ba70c 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 242 1.9E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24215 1f6fb1a9f1f5746b8cb77029479ba70c 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 194 1.9E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24215 1f6fb1a9f1f5746b8cb77029479ba70c 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 259 279 1.9E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24215 1f6fb1a9f1f5746b8cb77029479ba70c 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 57 74 1.9E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24215 1f6fb1a9f1f5746b8cb77029479ba70c 299 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 65 294 2.2E-62 T 12-10-2018 N288_24215 1f6fb1a9f1f5746b8cb77029479ba70c 299 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 204 223 2.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24215 1f6fb1a9f1f5746b8cb77029479ba70c 299 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 184 192 2.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24215 1f6fb1a9f1f5746b8cb77029479ba70c 299 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 143 2.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_24215 1f6fb1a9f1f5746b8cb77029479ba70c 299 SUPERFAMILY SSF51735 54 296 6.62E-83 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_24215 1f6fb1a9f1f5746b8cb77029479ba70c 299 Gene3D G3DSA:3.40.50.720 11 297 1.6E-87 T 12-10-2018 N288_24215 1f6fb1a9f1f5746b8cb77029479ba70c 299 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 191 219 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_06540 de82bc211085ab91a913efaf6ed57077 425 SUPERFAMILY SSF103473 6 411 4.58E-32 T 12-10-2018 IPR036259 MFS transporter superfamily N288_06540 de82bc211085ab91a913efaf6ed57077 425 Pfam PF07690 Major Facilitator Superfamily 16 368 4.6E-20 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_06540 de82bc211085ab91a913efaf6ed57077 425 Gene3D G3DSA:1.20.1250.20 6 406 5.6E-28 T 12-10-2018 N288_05625 4e9176a015d6ad9a7d02f96c584318d1 154 SUPERFAMILY SSF101697 41 145 3.27E-45 T 12-10-2018 IPR036289 Hypothetical protein YfhH N288_05625 4e9176a015d6ad9a7d02f96c584318d1 154 Pfam PF08838 Protein of unknown function (DUF1811) 45 144 2.2E-45 T 12-10-2018 IPR014938 Protein of unknown function DUF1811 N288_05625 4e9176a015d6ad9a7d02f96c584318d1 154 Gene3D G3DSA:1.10.287.880 37 92 3.8E-29 T 12-10-2018 N288_05625 4e9176a015d6ad9a7d02f96c584318d1 154 Gene3D G3DSA:2.30.30.340 93 151 5.7E-27 T 12-10-2018 N288_17615 6ffe10711fc9ac6eaea4ef56cd523c2a 181 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 177 7.6E-25 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 N288_17615 6ffe10711fc9ac6eaea4ef56cd523c2a 181 SUPERFAMILY SSF53254 2 176 5.72E-31 T 12-10-2018 IPR029033 Histidine phosphatase superfamily N288_17615 6ffe10711fc9ac6eaea4ef56cd523c2a 181 Gene3D G3DSA:3.40.50.1240 2 175 2.1E-30 T 12-10-2018 IPR029033 Histidine phosphatase superfamily N288_17615 6ffe10711fc9ac6eaea4ef56cd523c2a 181 SMART SM00855 3 141 3.1E-7 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 N288_17615 6ffe10711fc9ac6eaea4ef56cd523c2a 181 PIRSF PIRSF000709 2 162 0.0017 T 12-10-2018 N288_14295 7c17030ad846b61893f3411594124201 153 ProDom PD076312 INHIBITOR INTRACELLULAR PROTEINASE PRECURSOR SIGNAL DOMAIN SLH S-LAYER PROTEASE BSUPI 56 133 1.0E-4 T 12-10-2018 IPR020481 Intracellular proteinase inhibitor BsuPI N288_14295 7c17030ad846b61893f3411594124201 153 Pfam PF12690 Intracellular proteinase inhibitor 57 131 1.3E-17 T 12-10-2018 IPR020481 Intracellular proteinase inhibitor BsuPI N288_14295 7c17030ad846b61893f3411594124201 153 Gene3D G3DSA:2.60.40.2360 41 153 4.9E-24 T 12-10-2018 IPR038144 Intracellular proteinase inhibitor N288_21790 bebc0c5a269a8befe12c5f796466560f 238 Gene3D G3DSA:3.40.50.1110 31 235 4.0E-44 T 12-10-2018 IPR036514 SGNH hydrolase superfamily N288_21790 bebc0c5a269a8befe12c5f796466560f 238 SUPERFAMILY SSF52266 31 231 2.11E-38 T 12-10-2018 N288_21790 bebc0c5a269a8befe12c5f796466560f 238 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 37 223 4.8E-28 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain N288_25640 a10ed05967707bb0b0e0f0d77e763cd8 245 Pfam PF00005 ABC transporter 20 168 1.2E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_25640 a10ed05967707bb0b0e0f0d77e763cd8 245 PIRSF PIRSF039085 1 244 1.6E-115 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 N288_25640 a10ed05967707bb0b0e0f0d77e763cd8 245 SMART SM00382 29 216 2.6E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_25640 a10ed05967707bb0b0e0f0d77e763cd8 245 Gene3D G3DSA:3.40.50.300 1 245 3.5E-78 T 12-10-2018 N288_25640 a10ed05967707bb0b0e0f0d77e763cd8 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_25640 a10ed05967707bb0b0e0f0d77e763cd8 245 SUPERFAMILY SSF52540 4 238 2.78E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_18930 1fad25f1e685a45475201716a31b2f66 205 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 15 196 8.5E-41 T 12-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like N288_15575 79df1ed17ffb1640e10c297d175cc3c0 202 Pfam PF13649 Methyltransferase domain 47 142 3.2E-10 T 12-10-2018 N288_15575 79df1ed17ffb1640e10c297d175cc3c0 202 Gene3D G3DSA:3.40.50.150 21 187 3.9E-18 T 12-10-2018 N288_15575 79df1ed17ffb1640e10c297d175cc3c0 202 SUPERFAMILY SSF53335 31 179 2.63E-19 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_23085 b399e24417c81987d83bdfb88cb4ae08 213 Pfam PF04854 Protein of unknown function, DUF624 18 94 3.3E-27 T 12-10-2018 IPR006938 Protein of unknown function DUF624 N288_19015 ec58fb31c28636f48121864fe7e7c4ad 258 SUPERFAMILY SSF51261 77 254 1.26E-12 T 12-10-2018 IPR011055 Duplicated hybrid motif N288_19015 ec58fb31c28636f48121864fe7e7c4ad 258 Pfam PF01551 Peptidase family M23 161 251 1.0E-13 T 12-10-2018 IPR016047 Peptidase M23 N288_19015 ec58fb31c28636f48121864fe7e7c4ad 258 Gene3D G3DSA:2.70.70.10 126 256 5.6E-15 T 12-10-2018 IPR011055 Duplicated hybrid motif N288_21250 721b569e70826d9b0b0f4285584eb0f9 275 SMART SM00382 31 228 1.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_21250 721b569e70826d9b0b0f4285584eb0f9 275 Gene3D G3DSA:3.40.50.300 2 252 1.4E-66 T 12-10-2018 N288_21250 721b569e70826d9b0b0f4285584eb0f9 275 Pfam PF00005 ABC transporter 23 170 1.4E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_21250 721b569e70826d9b0b0f4285584eb0f9 275 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_21250 721b569e70826d9b0b0f4285584eb0f9 275 SUPERFAMILY SSF52540 6 232 1.7E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_24485 f7d030a564f95a35838e756d4740e419 334 Gene3D G3DSA:3.30.565.10 174 323 9.2E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_24485 f7d030a564f95a35838e756d4740e419 334 SUPERFAMILY SSF55874 175 323 2.23E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_24485 f7d030a564f95a35838e756d4740e419 334 SMART SM00387 216 326 2.0E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_24485 f7d030a564f95a35838e756d4740e419 334 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 217 325 8.1E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_24485 f7d030a564f95a35838e756d4740e419 334 Gene3D G3DSA:1.10.287.130 124 169 9.2E-28 T 12-10-2018 N288_01310 5da49419f5325db6605beb16b8eefda1 501 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 4 488 2.1E-159 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 N288_01310 5da49419f5325db6605beb16b8eefda1 501 Gene3D G3DSA:3.40.50.880 251 400 2.8E-20 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_01310 5da49419f5325db6605beb16b8eefda1 501 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 228 1.4E-21 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain N288_01310 5da49419f5325db6605beb16b8eefda1 501 Gene3D G3DSA:3.40.50.300 1 239 6.9E-55 T 12-10-2018 N288_01310 5da49419f5325db6605beb16b8eefda1 501 SUPERFAMILY SSF52317 254 453 2.96E-32 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_01310 5da49419f5325db6605beb16b8eefda1 501 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 499 170.392 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 N288_01310 5da49419f5325db6605beb16b8eefda1 501 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 253 445 7.8E-49 T 12-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 N288_01310 5da49419f5325db6605beb16b8eefda1 501 SUPERFAMILY SSF52540 1 237 1.5E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_04685 056416ff69ab3f1524a0612da0fe5155 272 SMART SM00860 15 143 2.1E-6 T 12-10-2018 IPR018958 Knr4/Smi1-like domain N288_04685 056416ff69ab3f1524a0612da0fe5155 272 Pfam PF14568 SMI1-KNR4 cell-wall 18 141 2.5E-19 T 12-10-2018 N288_04685 056416ff69ab3f1524a0612da0fe5155 272 SUPERFAMILY SSF160631 11 154 4.45E-19 T 12-10-2018 N288_04685 056416ff69ab3f1524a0612da0fe5155 272 Gene3D G3DSA:3.40.1580.10 3 155 2.2E-21 T 12-10-2018 IPR037883 Knr4/Smi1-like domain superfamily N288_13810 53e444f920372a3e9d26c1c1bc6b9312 585 SUPERFAMILY SSF90123 7 319 8.11E-55 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_13810 53e444f920372a3e9d26c1c1bc6b9312 585 Pfam PF00664 ABC transporter transmembrane region 17 293 2.4E-29 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 N288_13810 53e444f920372a3e9d26c1c1bc6b9312 585 Gene3D G3DSA:1.20.1560.10 2 320 8.0E-66 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 N288_13810 53e444f920372a3e9d26c1c1bc6b9312 585 Pfam PF00005 ABC transporter 356 504 2.0E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_13810 53e444f920372a3e9d26c1c1bc6b9312 585 SMART SM00382 365 558 4.0E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_13810 53e444f920372a3e9d26c1c1bc6b9312 585 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_13810 53e444f920372a3e9d26c1c1bc6b9312 585 Gene3D G3DSA:3.40.50.300 326 578 3.9E-83 T 12-10-2018 N288_13810 53e444f920372a3e9d26c1c1bc6b9312 585 SUPERFAMILY SSF52540 336 576 2.18E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_12350 7d96e6448453082209808e4fffc8a4fa 181 Gene3D G3DSA:3.40.50.850 1 181 3.3E-50 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 N288_12350 7d96e6448453082209808e4fffc8a4fa 181 SUPERFAMILY SSF52499 2 174 1.57E-49 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 N288_12350 7d96e6448453082209808e4fffc8a4fa 181 Pfam PF00857 Isochorismatase family 4 175 1.3E-36 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 N288_04460 44dbdaf5129b5dda4676c1538f711e7c 470 Gene3D G3DSA:1.20.1730.10 20 469 7.9E-77 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily N288_04460 44dbdaf5129b5dda4676c1538f711e7c 470 Pfam PF00474 Sodium:solute symporter family 33 415 1.8E-44 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 N288_06735 3302ec511bf2af4823e89dddfe6c7f82 417 Pfam PF12698 ABC-2 family transporter protein 19 387 2.7E-57 T 12-10-2018 N288_00805 708c0d2be0a79f09cf286675996f0278 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 12-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00805 708c0d2be0a79f09cf286675996f0278 179 PIRSF PIRSF002161 1 179 2.4E-69 T 12-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00805 708c0d2be0a79f09cf286675996f0278 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.8E-42 T 12-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00805 708c0d2be0a79f09cf286675996f0278 179 Gene3D G3DSA:3.30.1440.10 1 179 1.8E-84 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00805 708c0d2be0a79f09cf286675996f0278 179 Pfam PF00281 Ribosomal protein L5 25 80 8.6E-28 T 12-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00805 708c0d2be0a79f09cf286675996f0278 179 SUPERFAMILY SSF55282 3 178 1.25E-78 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00805 708c0d2be0a79f09cf286675996f0278 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.445 T 12-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_01165 ace0762c314ddf934d451f3f09f87e1a 348 Pfam PF10282 Lactonase, 7-bladed beta-propeller 9 347 6.2E-134 T 12-10-2018 IPR019405 Lactonase, 7-bladed beta propeller N288_01165 ace0762c314ddf934d451f3f09f87e1a 348 SUPERFAMILY SSF51004 13 347 8.11E-48 T 12-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily N288_01165 ace0762c314ddf934d451f3f09f87e1a 348 Gene3D G3DSA:2.130.10.10 7 348 2.0E-128 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 N288_14240 522d697a556c730ecb8a06c731aa98f9 166 Gene3D G3DSA:3.90.79.10 2 149 1.5E-30 T 12-10-2018 N288_14240 522d697a556c730ecb8a06c731aa98f9 166 Pfam PF00293 NUDIX domain 6 133 8.9E-16 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_14240 522d697a556c730ecb8a06c731aa98f9 166 SUPERFAMILY SSF55811 4 142 1.49E-26 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_19835 b1668911d413ad23579d55d5fd79984d 265 Gene3D G3DSA:3.20.20.140 3 261 1.0E-63 T 12-10-2018 N288_19835 b1668911d413ad23579d55d5fd79984d 265 Pfam PF02811 PHP domain 4 170 7.7E-13 T 12-10-2018 IPR004013 PHP domain GO:0003824 N288_19835 b1668911d413ad23579d55d5fd79984d 265 SUPERFAMILY SSF89550 1 254 6.93E-35 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 N288_19835 b1668911d413ad23579d55d5fd79984d 265 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 3 260 2.0E-65 T 12-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 N288_22605 5fbbd28a4d05dac76a69953b97a466d9 762 Pfam PF07940 Heparinase II/III-like protein 368 527 1.1E-19 T 12-10-2018 IPR012480 Heparinase II/III-like GO:0016829 N288_22605 5fbbd28a4d05dac76a69953b97a466d9 762 SUPERFAMILY SSF48230 88 349 5.04E-20 T 12-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 N288_22605 5fbbd28a4d05dac76a69953b97a466d9 762 Gene3D G3DSA:2.70.98.70 367 622 4.2E-44 T 12-10-2018 N288_22605 5fbbd28a4d05dac76a69953b97a466d9 762 Gene3D G3DSA:1.50.10.100 11 350 1.4E-59 T 12-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 N288_16125 7f6458cef52766b9ec772fe1fc69f60c 104 ProDom PD030115 YODL GK1575 5 104 5.0E-27 T 12-10-2018 N288_16125 7f6458cef52766b9ec772fe1fc69f60c 104 Pfam PF14191 YodL-like 27 89 1.4E-7 T 12-10-2018 IPR025923 YodL-like N288_03735 de17242d2b3289eb16d1cf64ba6c6b72 171 Gene3D G3DSA:3.40.50.880 2 170 6.1E-51 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_03735 de17242d2b3289eb16d1cf64ba6c6b72 171 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 3 169 1.1E-54 T 12-10-2018 IPR006286 Deglycase PfpI N288_03735 de17242d2b3289eb16d1cf64ba6c6b72 171 Pfam PF01965 DJ-1/PfpI family 3 166 3.7E-50 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 N288_03735 de17242d2b3289eb16d1cf64ba6c6b72 171 SUPERFAMILY SSF52317 3 169 6.36E-43 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_18400 719f6c89ae87172b63ab605e11b46b76 131 Gene3D G3DSA:1.10.3830.10 10 127 5.8E-35 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 N288_18400 719f6c89ae87172b63ab605e11b46b76 131 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 75 86 - T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 N288_18400 719f6c89ae87172b63ab605e11b46b76 131 Pfam PF01219 Prokaryotic diacylglycerol kinase 22 122 3.7E-32 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 N288_14420 3953a6bcf9f6038348fdd69c7219fce7 282 SUPERFAMILY SSF52091 168 276 5.3E-17 T 12-10-2018 IPR036513 STAS domain superfamily N288_14420 3953a6bcf9f6038348fdd69c7219fce7 282 Gene3D G3DSA:3.30.750.24 162 281 4.0E-37 T 12-10-2018 IPR036513 STAS domain superfamily N288_14420 3953a6bcf9f6038348fdd69c7219fce7 282 Pfam PF01740 STAS domain 169 259 5.7E-12 T 12-10-2018 IPR002645 STAS domain N288_05550 e621f04eba18072c33b1152ff3d1752a 136 Pfam PF04138 GtrA-like protein 10 118 1.9E-16 T 12-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 N288_10345 132be19ea879c8cfb7038eb2921596fd 215 Pfam PF00239 Resolvase, N terminal domain 3 147 2.7E-26 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 N288_10345 132be19ea879c8cfb7038eb2921596fd 215 Gene3D G3DSA:3.40.50.1390 1 154 5.9E-28 T 12-10-2018 N288_10345 132be19ea879c8cfb7038eb2921596fd 215 SMART SM00857 3 149 7.1E-34 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 N288_10345 132be19ea879c8cfb7038eb2921596fd 215 SUPERFAMILY SSF53041 1 148 2.88E-26 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 N288_04960 4f3cbe280d802f0295eedcccecfe271d 344 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 184 337 2.3E-40 T 12-10-2018 IPR000160 GGDEF domain N288_04960 4f3cbe280d802f0295eedcccecfe271d 344 SUPERFAMILY SSF55073 192 340 2.43E-40 T 12-10-2018 IPR029787 Nucleotide cyclase N288_04960 4f3cbe280d802f0295eedcccecfe271d 344 Gene3D G3DSA:3.30.70.270 175 340 4.8E-47 T 12-10-2018 N288_04960 4f3cbe280d802f0295eedcccecfe271d 344 SMART SM00267 173 339 2.7E-47 T 12-10-2018 IPR000160 GGDEF domain N288_04960 4f3cbe280d802f0295eedcccecfe271d 344 Pfam PF00990 Diguanylate cyclase, GGDEF domain 187 335 1.8E-37 T 12-10-2018 IPR000160 GGDEF domain N288_10705 093e7243caad4e8643a6192d44355a67 443 SMART SM00710 189 210 3.3 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_10705 093e7243caad4e8643a6192d44355a67 443 SMART SM00710 394 416 1000.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_10705 093e7243caad4e8643a6192d44355a67 443 SMART SM00710 248 269 1.1 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_10705 093e7243caad4e8643a6192d44355a67 443 SMART SM00710 221 242 15.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_10705 093e7243caad4e8643a6192d44355a67 443 SMART SM00710 162 188 79.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_10705 093e7243caad4e8643a6192d44355a67 443 SUPERFAMILY SSF51126 16 369 3.67E-96 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor N288_10705 093e7243caad4e8643a6192d44355a67 443 Gene3D G3DSA:2.160.20.10 12 374 2.1E-123 T 12-10-2018 IPR012334 Pectin lyase fold N288_10705 093e7243caad4e8643a6192d44355a67 443 Pfam PF00295 Glycosyl hydrolases family 28 36 367 1.0E-51 T 12-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 N288_13445 7f2af7ed032351fb45e98d7d08fdc22f 300 Pfam PF01636 Phosphotransferase enzyme family 25 228 4.2E-20 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase N288_13445 7f2af7ed032351fb45e98d7d08fdc22f 300 Gene3D G3DSA:3.90.1200.10 102 291 1.5E-17 T 12-10-2018 N288_13445 7f2af7ed032351fb45e98d7d08fdc22f 300 SUPERFAMILY SSF56112 15 294 7.79E-40 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_23575 0867f76424d97a46b445e474b7bba17a 556 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 10 536 1.0E-220 T 12-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily N288_23575 0867f76424d97a46b445e474b7bba17a 556 Pfam PF00474 Sodium:solute symporter family 359 474 1.0E-18 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 N288_23575 0867f76424d97a46b445e474b7bba17a 556 Pfam PF00474 Sodium:solute symporter family 34 290 1.2E-38 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 N288_23575 0867f76424d97a46b445e474b7bba17a 556 Gene3D G3DSA:1.20.1730.10 22 547 4.3E-67 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily N288_23575 0867f76424d97a46b445e474b7bba17a 556 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 474 5.1E-56 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 N288_11980 c82a6185e048c1bdfa407a7dddc1a0fa 271 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 271 159.52 T 12-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 N288_11980 c82a6185e048c1bdfa407a7dddc1a0fa 271 Pfam PF02675 S-adenosylmethionine decarboxylase 42 175 1.1E-29 T 12-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 N288_11980 c82a6185e048c1bdfa407a7dddc1a0fa 271 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 8 267 1.3E-140 T 12-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 N288_11980 c82a6185e048c1bdfa407a7dddc1a0fa 271 SUPERFAMILY SSF56276 48 179 6.67E-24 T 12-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 N288_11980 c82a6185e048c1bdfa407a7dddc1a0fa 271 PIRSF PIRSF001356 3 269 4.4E-137 T 12-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 N288_11980 c82a6185e048c1bdfa407a7dddc1a0fa 271 Gene3D G3DSA:3.60.90.10 110 188 2.6E-7 T 12-10-2018 N288_22290 d5505175fd3fb74bc4e5be0f2634b0df 218 Pfam PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein 9 198 2.4E-64 T 12-10-2018 IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein N288_20195 4165dcb82a2e567c4f5f6fb4cf50b473 363 Pfam PF10776 Protein of unknown function (DUF2600) 20 348 1.7E-147 T 12-10-2018 IPR019712 Protein of unknown function DUF2600 N288_17240 92570ee358de5aaa9c74dabc1ce01551 194 Pfam PF12822 ECF transporter, substrate-specific component 7 176 1.1E-24 T 12-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 N288_17240 92570ee358de5aaa9c74dabc1ce01551 194 PIRSF PIRSF037778 2 189 2.6E-47 T 12-10-2018 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 N288_17240 92570ee358de5aaa9c74dabc1ce01551 194 Gene3D G3DSA:1.10.1760.20 4 191 7.5E-51 T 12-10-2018 N288_21660 e16fb60262e98c4284e33692c0191f20 297 Pfam PF03668 P-loop ATPase protein family 10 292 4.4E-130 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 N288_21660 e16fb60262e98c4284e33692c0191f20 297 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 9 291 41.95 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 N288_21660 e16fb60262e98c4284e33692c0191f20 297 Gene3D G3DSA:3.40.50.300 6 177 4.7E-6 T 12-10-2018 N288_21660 e16fb60262e98c4284e33692c0191f20 297 PIRSF PIRSF005052 9 294 9.2E-108 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 N288_21660 e16fb60262e98c4284e33692c0191f20 297 SUPERFAMILY SSF52540 11 164 2.41E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_17500 b5af3c3987870117b96503b62cd405bb 55 Pfam PF13072 Protein of unknown function (DUF3936) 2 37 5.5E-19 T 12-10-2018 IPR025177 Cell division inhibitor MciZ N288_15405 b6766861ecad3010a862d411f35dbbaf 320 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 231 297 1.5E-18 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_15405 b6766861ecad3010a862d411f35dbbaf 320 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 230 317 3.1E-29 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_15405 b6766861ecad3010a862d411f35dbbaf 320 Gene3D G3DSA:3.40.50.300 5 320 2.1E-103 T 12-10-2018 N288_15405 b6766861ecad3010a862d411f35dbbaf 320 SMART SM00382 37 229 9.8E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_15405 b6766861ecad3010a862d411f35dbbaf 320 Pfam PF00005 ABC transporter 29 179 5.8E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_15405 b6766861ecad3010a862d411f35dbbaf 320 SUPERFAMILY SSF52540 36 315 4.96E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_15405 b6766861ecad3010a862d411f35dbbaf 320 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_21260 703bfc5cb987c2e0b4f3d4aff6f9f8a7 333 SUPERFAMILY SSF81345 6 329 1.05E-80 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_21260 703bfc5cb987c2e0b4f3d4aff6f9f8a7 333 Gene3D G3DSA:1.10.3470.10 8 332 5.7E-91 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_21260 703bfc5cb987c2e0b4f3d4aff6f9f8a7 333 Pfam PF01032 FecCD transport family 19 329 1.9E-92 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 N288_23570 59a6c8eedf3c61026669a35f124c56e0 226 Pfam PF01476 LysM domain 58 100 1.9E-14 T 12-10-2018 IPR018392 LysM domain N288_23570 59a6c8eedf3c61026669a35f124c56e0 226 Pfam PF01476 LysM domain 122 163 5.1E-14 T 12-10-2018 IPR018392 LysM domain N288_23570 59a6c8eedf3c61026669a35f124c56e0 226 SUPERFAMILY SSF54106 121 163 2.35E-11 T 12-10-2018 N288_23570 59a6c8eedf3c61026669a35f124c56e0 226 SUPERFAMILY SSF54106 56 100 1.2E-12 T 12-10-2018 N288_23570 59a6c8eedf3c61026669a35f124c56e0 226 SMART SM00257 121 164 6.9E-14 T 12-10-2018 IPR018392 LysM domain N288_23570 59a6c8eedf3c61026669a35f124c56e0 226 SMART SM00257 57 100 8.9E-16 T 12-10-2018 IPR018392 LysM domain N288_23570 59a6c8eedf3c61026669a35f124c56e0 226 Gene3D G3DSA:3.10.350.10 118 168 5.2E-16 T 12-10-2018 IPR036779 LysM domain superfamily N288_23570 59a6c8eedf3c61026669a35f124c56e0 226 Gene3D G3DSA:3.10.350.10 53 106 8.1E-20 T 12-10-2018 IPR036779 LysM domain superfamily N288_08905 b66d16b4dc1da93b255c5ffa1da57dba 66 Pfam PF09963 Uncharacterized protein conserved in bacteria (DUF2197) 1 56 8.7E-33 T 12-10-2018 IPR019241 Protein of unknown function DUF2197 N288_22990 1517c11ac4703aaa18a413107e0e9bf5 227 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 3 225 41.344 T 12-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 N288_22990 1517c11ac4703aaa18a413107e0e9bf5 227 SUPERFAMILY SSF51366 3 220 1.84E-64 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 N288_22990 1517c11ac4703aaa18a413107e0e9bf5 227 Gene3D G3DSA:3.20.20.70 3 225 1.5E-94 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_22990 1517c11ac4703aaa18a413107e0e9bf5 227 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 27 224 1.4E-69 T 12-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 N288_13750 7193500f82b954cc5d1477a22917d030 219 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 22 219 3.3E-79 T 12-10-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent N288_13750 7193500f82b954cc5d1477a22917d030 219 SUPERFAMILY SSF50475 38 187 3.93E-19 T 12-10-2018 N288_13750 7193500f82b954cc5d1477a22917d030 219 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 44 137 9.2E-15 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 N288_13750 7193500f82b954cc5d1477a22917d030 219 Gene3D G3DSA:2.30.110.10 40 162 1.3E-24 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 N288_11210 b6add1305e5f60561b80ec7f5a62e2e3 207 TIGRFAM TIGR03035 trp_arylform: arylformamidase 2 204 2.2E-75 T 12-10-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 N288_11210 b6add1305e5f60561b80ec7f5a62e2e3 207 SUPERFAMILY SSF102198 2 203 5.89E-55 T 12-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 N288_11210 b6add1305e5f60561b80ec7f5a62e2e3 207 Pfam PF04199 Putative cyclase 3 148 1.7E-21 T 12-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 N288_11210 b6add1305e5f60561b80ec7f5a62e2e3 207 Hamap MF_01969 Kynurenine formamidase [kynB]. 1 205 41.256 T 12-10-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 N288_11210 b6add1305e5f60561b80ec7f5a62e2e3 207 Gene3D G3DSA:3.50.30.50 1 205 9.7E-72 T 12-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 N288_05145 d79e5d7487c10a32a03f943dd8a22066 473 Pfam PF03553 Na+/H+ antiporter family 160 453 5.1E-50 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 N288_05145 d79e5d7487c10a32a03f943dd8a22066 473 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 6 456 7.9E-148 T 12-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 N288_20770 58f9842fa89588bf6e0b71457a7db0f0 140 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 7 131 8.0E-32 T 12-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein N288_03520 22d79aec755c6775d935964987d508fa 98 Gene3D G3DSA:3.30.70.100 1 97 2.5E-29 T 12-10-2018 N288_03520 22d79aec755c6775d935964987d508fa 98 Pfam PF00708 Acylphosphatase 12 96 9.5E-28 T 12-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 N288_03520 22d79aec755c6775d935964987d508fa 98 ProSitePatterns PS00151 Acylphosphatase signature 2. 39 55 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 N288_03520 22d79aec755c6775d935964987d508fa 98 SUPERFAMILY SSF54975 8 97 3.27E-27 T 12-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 N288_03520 22d79aec755c6775d935964987d508fa 98 ProSitePatterns PS00150 Acylphosphatase signature 1. 15 25 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 N288_09340 da7f67065599ea255de09209c27941ab 1070 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_09340 da7f67065599ea255de09209c27941ab 1070 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 1.7E-41 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09340 da7f67065599ea255de09209c27941ab 1070 Gene3D G3DSA:3.30.470.20 659 929 8.3E-108 T 12-10-2018 N288_09340 da7f67065599ea255de09209c27941ab 1070 SMART SM01096 420 540 2.6E-60 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09340 da7f67065599ea255de09209c27941ab 1070 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1057 13.226 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09340 da7f67065599ea255de09209c27941ab 1070 SUPERFAMILY SSF48108 395 546 1.05E-49 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09340 da7f67065599ea255de09209c27941ab 1070 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 5.2E-81 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_09340 da7f67065599ea255de09209c27941ab 1070 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 866 1.9E-37 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_09340 da7f67065599ea255de09209c27941ab 1070 Gene3D G3DSA:3.40.50.20 547 655 6.2E-45 T 12-10-2018 N288_09340 da7f67065599ea255de09209c27941ab 1070 Pfam PF02142 MGS-like domain 950 1036 1.7E-18 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain N288_09340 da7f67065599ea255de09209c27941ab 1070 SUPERFAMILY SSF52440 549 668 3.6E-48 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily N288_09340 da7f67065599ea255de09209c27941ab 1070 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_09340 da7f67065599ea255de09209c27941ab 1070 SUPERFAMILY SSF56059 128 399 2.65E-110 T 12-10-2018 N288_09340 da7f67065599ea255de09209c27941ab 1070 Gene3D G3DSA:3.40.50.1380 931 1061 4.4E-35 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily N288_09340 da7f67065599ea255de09209c27941ab 1070 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_09340 da7f67065599ea255de09209c27941ab 1070 SMART SM00851 949 1036 9.2E-28 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain N288_09340 da7f67065599ea255de09209c27941ab 1070 Gene3D G3DSA:3.40.50.20 1 116 5.0E-49 T 12-10-2018 N288_09340 da7f67065599ea255de09209c27941ab 1070 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 N288_09340 da7f67065599ea255de09209c27941ab 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.3E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09340 da7f67065599ea255de09209c27941ab 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.3E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09340 da7f67065599ea255de09209c27941ab 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 1.3E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09340 da7f67065599ea255de09209c27941ab 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.3E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09340 da7f67065599ea255de09209c27941ab 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.3E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09340 da7f67065599ea255de09209c27941ab 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 1.3E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09340 da7f67065599ea255de09209c27941ab 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.3E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09340 da7f67065599ea255de09209c27941ab 1070 Gene3D G3DSA:3.30.470.20 120 401 1.6E-127 T 12-10-2018 N288_09340 da7f67065599ea255de09209c27941ab 1070 SUPERFAMILY SSF56059 666 927 2.3E-100 T 12-10-2018 N288_09340 da7f67065599ea255de09209c27941ab 1070 SUPERFAMILY SSF52440 1 127 8.06E-50 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily N288_09340 da7f67065599ea255de09209c27941ab 1070 Gene3D G3DSA:1.10.1030.10 403 546 3.6E-45 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09340 da7f67065599ea255de09209c27941ab 1070 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1047 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09340 da7f67065599ea255de09209c27941ab 1070 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.569 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 N288_09340 da7f67065599ea255de09209c27941ab 1070 SUPERFAMILY SSF52335 935 1053 4.19E-32 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily N288_02755 89b1b4c272f80385c86871aec3b94490 141 SUPERFAMILY SSF46785 13 139 2.3E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_02755 89b1b4c272f80385c86871aec3b94490 141 Pfam PF02082 Transcriptional regulator 14 86 1.4E-18 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type N288_02755 89b1b4c272f80385c86871aec3b94490 141 Gene3D G3DSA:1.10.10.10 5 141 3.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_02755 89b1b4c272f80385c86871aec3b94490 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 54 72 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site N288_13995 4474e91116b8b42834fee7911f8b5bc0 70 SUPERFAMILY SSF47413 1 68 2.82E-19 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_13995 4474e91116b8b42834fee7911f8b5bc0 70 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 65 1.6E-23 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_13995 4474e91116b8b42834fee7911f8b5bc0 70 Gene3D G3DSA:1.10.260.40 1 68 2.1E-9 T 12-10-2018 N288_13995 4474e91116b8b42834fee7911f8b5bc0 70 SMART SM00530 6 62 3.6E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_18080 af80ab5d1426e632b7efbc4aff081c25 210 Pfam PF00753 Metallo-beta-lactamase superfamily 9 191 3.8E-33 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_18080 af80ab5d1426e632b7efbc4aff081c25 210 SUPERFAMILY SSF56281 1 208 2.1E-50 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_18080 af80ab5d1426e632b7efbc4aff081c25 210 Gene3D G3DSA:3.60.15.10 1 210 1.0E-63 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_18080 af80ab5d1426e632b7efbc4aff081c25 210 SMART SM00849 12 191 2.5E-43 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_23290 34f0a8bf713523f06f7010a82d5e77f1 420 Pfam PF13440 Polysaccharide biosynthesis protein 33 324 8.0E-15 T 12-10-2018 N288_23440 c7736b84eb99d603b25642dedf46c11e 463 SUPERFAMILY SSF53187 273 452 1.7E-58 T 12-10-2018 N288_23440 c7736b84eb99d603b25642dedf46c11e 463 Pfam PF00395 S-layer homology domain 88 130 4.8E-16 T 12-10-2018 IPR001119 S-layer homology domain N288_23440 c7736b84eb99d603b25642dedf46c11e 463 Pfam PF00395 S-layer homology domain 27 70 1.1E-11 T 12-10-2018 IPR001119 S-layer homology domain N288_23440 c7736b84eb99d603b25642dedf46c11e 463 Gene3D G3DSA:3.40.630.40 270 455 4.9E-65 T 12-10-2018 N288_23440 c7736b84eb99d603b25642dedf46c11e 463 Pfam PF08239 Bacterial SH3 domain 206 255 5.4E-10 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type N288_23440 c7736b84eb99d603b25642dedf46c11e 463 Gene3D G3DSA:2.30.30.40 198 259 1.7E-12 T 12-10-2018 N288_23440 c7736b84eb99d603b25642dedf46c11e 463 SMART SM00646 332 447 2.4E-44 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 N288_23440 c7736b84eb99d603b25642dedf46c11e 463 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 274 447 3.2E-55 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 N288_23440 c7736b84eb99d603b25642dedf46c11e 463 SMART SM00287 197 258 5.0E-5 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type N288_11215 401fe3c50f27402a4fda988664d22dfb 232 Pfam PF03301 Tryptophan 2,3-dioxygenase 8 118 9.4E-14 T 12-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 N288_11215 401fe3c50f27402a4fda988664d22dfb 232 Gene3D G3DSA:1.20.58.480 9 225 1.4E-40 T 12-10-2018 N288_11215 401fe3c50f27402a4fda988664d22dfb 232 SUPERFAMILY SSF140959 10 219 1.16E-48 T 12-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 N288_01835 d572341879fab3bdee07317639e9358f 183 SUPERFAMILY SSF52833 34 137 8.31E-9 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_01835 d572341879fab3bdee07317639e9358f 183 Pfam PF14595 Thioredoxin 10 136 5.9E-44 T 12-10-2018 N288_01835 d572341879fab3bdee07317639e9358f 183 Gene3D G3DSA:3.40.30.10 1 170 4.9E-20 T 12-10-2018 N288_02350 e1491c9813e343fc47b4f94335b55d23 216 Pfam PF04012 PspA/IM30 family 2 184 5.7E-35 T 12-10-2018 IPR007157 PspA/IM30 N288_20600 92abbf70f51a8edbc3a54bdb47e6aad2 305 SUPERFAMILY SSF103481 37 141 1.16E-16 T 12-10-2018 N288_20600 92abbf70f51a8edbc3a54bdb47e6aad2 305 Pfam PF00892 EamA-like transporter family 149 283 4.5E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_20600 92abbf70f51a8edbc3a54bdb47e6aad2 305 Pfam PF00892 EamA-like transporter family 9 137 4.9E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_20600 92abbf70f51a8edbc3a54bdb47e6aad2 305 SUPERFAMILY SSF103481 187 287 3.92E-13 T 12-10-2018 N288_08625 96f9d99673684d867cceb7963664c405 288 SUPERFAMILY SSF56300 56 286 2.05E-33 T 12-10-2018 N288_08625 96f9d99673684d867cceb7963664c405 288 Gene3D G3DSA:3.60.21.10 57 251 1.7E-21 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_08625 96f9d99673684d867cceb7963664c405 288 Pfam PF00149 Calcineurin-like phosphoesterase 59 161 1.6E-7 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 N288_22625 692307c52978386d6a1fa92822645ab5 410 PIRSF PIRSF000390 14 407 3.3E-83 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase N288_22625 692307c52978386d6a1fa92822645ab5 410 Gene3D G3DSA:3.90.1150.10 263 408 4.5E-27 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_22625 692307c52978386d6a1fa92822645ab5 410 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 27 402 1.5E-82 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase N288_22625 692307c52978386d6a1fa92822645ab5 410 Gene3D G3DSA:3.40.640.10 9 262 2.9E-73 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_22625 692307c52978386d6a1fa92822645ab5 410 SUPERFAMILY SSF53383 24 405 4.21E-85 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_09385 6feb020770069c77870bd1a3d6a29757 87 Hamap MF_01503 UPF0296 protein . 3 87 29.56 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A N288_09385 6feb020770069c77870bd1a3d6a29757 87 Pfam PF04025 Domain of unknown function (DUF370) 5 77 1.8E-37 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A N288_09385 6feb020770069c77870bd1a3d6a29757 87 ProDom PD063023 UPF0296 YLZA BA4010/GBAA4010/BAS3723 BLI01788/BL02292 BT9727_3613 BC3870 TM1690 CBDBA43 SYC0519_C BCE33L3631 5 78 4.0E-33 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A N288_17660 7b0a105c3f2f0b7080aafda8bc30229c 138 SUPERFAMILY SSF54593 1 134 1.1E-33 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_17660 7b0a105c3f2f0b7080aafda8bc30229c 138 Gene3D G3DSA:3.10.180.10 1 133 1.6E-42 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_17660 7b0a105c3f2f0b7080aafda8bc30229c 138 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 4 131 1.1E-46 T 12-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 N288_17660 7b0a105c3f2f0b7080aafda8bc30229c 138 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 116 5.0E-24 T 12-10-2018 N288_17660 7b0a105c3f2f0b7080aafda8bc30229c 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 7 28 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 N288_19420 9f01a14b598e35a8d38e72ad6a430c6d 134 Pfam PF03994 Domain of Unknown Function (DUF350) 80 134 1.6E-14 T 12-10-2018 IPR007140 Protein of unknown function DUF350 N288_19420 9f01a14b598e35a8d38e72ad6a430c6d 134 Pfam PF03994 Domain of Unknown Function (DUF350) 15 68 1.6E-14 T 12-10-2018 IPR007140 Protein of unknown function DUF350 N288_17110 062e4029dcf921fbcab98ff8fc9a9775 202 PIRSF PIRSF036710 1 202 7.9E-43 T 12-10-2018 IPR014617 Predicted membrane protein, Bacillus YphA type N288_13430 552c0c40976b9cfbf3735b015bc5782f 337 Pfam PF11553 Protein of unknown function (DUF3231) 170 330 2.2E-51 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_13430 552c0c40976b9cfbf3735b015bc5782f 337 Pfam PF11553 Protein of unknown function (DUF3231) 2 156 4.4E-48 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_13430 552c0c40976b9cfbf3735b015bc5782f 337 Gene3D G3DSA:1.20.1260.10 1 145 8.1E-10 T 12-10-2018 IPR012347 Ferritin-like N288_22805 534cf314c73577a1c9bfa9508ff5f3f9 294 Pfam PF13185 GAF domain 13 152 5.5E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 N288_22805 534cf314c73577a1c9bfa9508ff5f3f9 294 Pfam PF01740 STAS domain 171 258 5.2E-5 T 12-10-2018 IPR002645 STAS domain N288_22805 534cf314c73577a1c9bfa9508ff5f3f9 294 Gene3D G3DSA:3.30.750.24 162 277 1.4E-27 T 12-10-2018 IPR036513 STAS domain superfamily N288_22805 534cf314c73577a1c9bfa9508ff5f3f9 294 SUPERFAMILY SSF55781 13 162 3.05E-17 T 12-10-2018 N288_22805 534cf314c73577a1c9bfa9508ff5f3f9 294 SMART SM00065 13 161 6.2E-4 T 12-10-2018 IPR003018 GAF domain GO:0005515 N288_22805 534cf314c73577a1c9bfa9508ff5f3f9 294 Gene3D G3DSA:3.30.450.40 3 154 2.9E-13 T 12-10-2018 IPR029016 GAF-like domain superfamily N288_22805 534cf314c73577a1c9bfa9508ff5f3f9 294 SUPERFAMILY SSF52091 168 275 1.9E-10 T 12-10-2018 IPR036513 STAS domain superfamily N288_12200 6b05999f1c6fdbbf3c62b5c96cdbd87c 44 Pfam PF14149 YhfH-like protein 2 38 6.0E-21 T 12-10-2018 IPR025432 YhfH-like protein N288_25055 649e0fb37d71d77809243cf119ea83d0 150 SUPERFAMILY SSF46785 4 142 5.86E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_25055 649e0fb37d71d77809243cf119ea83d0 150 SMART SM00347 21 121 3.8E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_25055 649e0fb37d71d77809243cf119ea83d0 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 2.3E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_25055 649e0fb37d71d77809243cf119ea83d0 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 2.3E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_25055 649e0fb37d71d77809243cf119ea83d0 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 2.3E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_25055 649e0fb37d71d77809243cf119ea83d0 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 2.3E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_25055 649e0fb37d71d77809243cf119ea83d0 150 Pfam PF01047 MarR family 28 85 1.2E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_25055 649e0fb37d71d77809243cf119ea83d0 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site N288_25055 649e0fb37d71d77809243cf119ea83d0 150 Gene3D G3DSA:1.10.10.10 2 145 5.0E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_09805 d8800e226c7c9bbe7817e5f31a1fb953 290 PIRSF PIRSF003092 1 289 3.5E-79 T 12-10-2018 IPR025501 ATP binding protein MinD N288_09805 d8800e226c7c9bbe7817e5f31a1fb953 290 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 259 3.7E-21 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 N288_09805 d8800e226c7c9bbe7817e5f31a1fb953 290 SUPERFAMILY SSF52540 21 269 5.76E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_09805 d8800e226c7c9bbe7817e5f31a1fb953 290 Gene3D G3DSA:3.40.50.300 20 260 3.7E-57 T 12-10-2018 N288_15550 e7846ba680f29cd581c6d86dfd10f0fd 154 Pfam PF01740 STAS domain 32 134 3.1E-5 T 12-10-2018 IPR002645 STAS domain N288_15550 e7846ba680f29cd581c6d86dfd10f0fd 154 SUPERFAMILY SSF52091 29 141 1.22E-9 T 12-10-2018 IPR036513 STAS domain superfamily N288_15550 e7846ba680f29cd581c6d86dfd10f0fd 154 Gene3D G3DSA:3.30.750.24 22 148 1.6E-35 T 12-10-2018 IPR036513 STAS domain superfamily N288_15935 fcc52c1bbabced9fa998cdc6da87e379 397 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 1 197 4.1E-79 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 N288_15935 fcc52c1bbabced9fa998cdc6da87e379 397 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 1 393 55.833 T 12-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 N288_15935 fcc52c1bbabced9fa998cdc6da87e379 397 Gene3D G3DSA:3.40.50.10990 204 374 6.9E-80 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 N288_15935 fcc52c1bbabced9fa998cdc6da87e379 397 Gene3D G3DSA:3.90.870.10 1 203 5.5E-88 T 12-10-2018 N288_15935 fcc52c1bbabced9fa998cdc6da87e379 397 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 6 196 6.1E-84 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 N288_15935 fcc52c1bbabced9fa998cdc6da87e379 397 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 202 397 42.44 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 N288_15935 fcc52c1bbabced9fa998cdc6da87e379 397 SUPERFAMILY SSF142695 202 373 1.7E-75 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 N288_15935 fcc52c1bbabced9fa998cdc6da87e379 397 Pfam PF00925 GTP cyclohydrolase II 206 371 3.6E-77 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 N288_15935 fcc52c1bbabced9fa998cdc6da87e379 397 PIRSF PIRSF001259 1 397 3.3E-185 T 12-10-2018 N288_15935 fcc52c1bbabced9fa998cdc6da87e379 397 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 201 38.776 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 N288_15935 fcc52c1bbabced9fa998cdc6da87e379 397 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 206 395 1.3E-81 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 N288_15935 fcc52c1bbabced9fa998cdc6da87e379 397 SUPERFAMILY SSF55821 2 204 1.69E-84 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily N288_03660 c0e09f091934eaa8372ec1d6431ed3cf 197 Pfam PF12389 Camelysin metallo-endopeptidase 3 195 4.7E-93 T 12-10-2018 IPR022121 Peptidase M73, camelysin N288_03660 c0e09f091934eaa8372ec1d6431ed3cf 197 TIGRFAM TIGR04088 cognate_SipW: SipW-cognate class signal peptide 11 44 1.1E-12 T 12-10-2018 IPR023833 Signal peptide, camelysin N288_10095 4a5c5c8093100dc160e84fe831699b0b 426 Gene3D G3DSA:3.30.830.10 7 235 2.0E-61 T 12-10-2018 N288_10095 4a5c5c8093100dc160e84fe831699b0b 426 SUPERFAMILY SSF63411 251 413 3.33E-32 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 N288_10095 4a5c5c8093100dc160e84fe831699b0b 426 SUPERFAMILY SSF63411 13 231 1.34E-22 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 N288_10095 4a5c5c8093100dc160e84fe831699b0b 426 Gene3D G3DSA:3.30.830.10 242 425 3.1E-44 T 12-10-2018 N288_10095 4a5c5c8093100dc160e84fe831699b0b 426 Pfam PF05193 Peptidase M16 inactive domain 184 357 2.1E-28 T 12-10-2018 IPR007863 Peptidase M16, C-terminal N288_16545 459658cce9cfd6fb34c5ab8a7f1ecf92 307 Gene3D G3DSA:3.40.50.1980 30 174 5.4E-45 T 12-10-2018 N288_16545 459658cce9cfd6fb34c5ab8a7f1ecf92 307 PRINTS PR00690 Adhesin family signature 32 50 4.1E-43 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 N288_16545 459658cce9cfd6fb34c5ab8a7f1ecf92 307 PRINTS PR00690 Adhesin family signature 241 259 4.1E-43 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 N288_16545 459658cce9cfd6fb34c5ab8a7f1ecf92 307 PRINTS PR00690 Adhesin family signature 76 93 4.1E-43 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 N288_16545 459658cce9cfd6fb34c5ab8a7f1ecf92 307 PRINTS PR00690 Adhesin family signature 63 76 4.1E-43 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 N288_16545 459658cce9cfd6fb34c5ab8a7f1ecf92 307 PRINTS PR00690 Adhesin family signature 188 209 4.1E-43 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 N288_16545 459658cce9cfd6fb34c5ab8a7f1ecf92 307 PRINTS PR00690 Adhesin family signature 272 291 4.1E-43 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 N288_16545 459658cce9cfd6fb34c5ab8a7f1ecf92 307 SUPERFAMILY SSF53807 32 307 6.87E-81 T 12-10-2018 N288_16545 459658cce9cfd6fb34c5ab8a7f1ecf92 307 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 305 1.1E-71 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 N288_16545 459658cce9cfd6fb34c5ab8a7f1ecf92 307 Gene3D G3DSA:3.40.50.1980 177 307 6.2E-48 T 12-10-2018 N288_16545 459658cce9cfd6fb34c5ab8a7f1ecf92 307 PRINTS PR00691 Adhesin B signature 57 75 5.7E-26 T 12-10-2018 IPR006129 Adhesin B GO:0007155 N288_16545 459658cce9cfd6fb34c5ab8a7f1ecf92 307 PRINTS PR00691 Adhesin B signature 188 205 5.7E-26 T 12-10-2018 IPR006129 Adhesin B GO:0007155 N288_16545 459658cce9cfd6fb34c5ab8a7f1ecf92 307 PRINTS PR00691 Adhesin B signature 76 95 5.7E-26 T 12-10-2018 IPR006129 Adhesin B GO:0007155 N288_16545 459658cce9cfd6fb34c5ab8a7f1ecf92 307 PRINTS PR00691 Adhesin B signature 264 282 5.7E-26 T 12-10-2018 IPR006129 Adhesin B GO:0007155 N288_16545 459658cce9cfd6fb34c5ab8a7f1ecf92 307 PRINTS PR00691 Adhesin B signature 285 303 5.7E-26 T 12-10-2018 IPR006129 Adhesin B GO:0007155 N288_16545 459658cce9cfd6fb34c5ab8a7f1ecf92 307 PRINTS PR00691 Adhesin B signature 32 53 5.7E-26 T 12-10-2018 IPR006129 Adhesin B GO:0007155 N288_08210 b203641562637c506067ad9f0b21b4ae 332 Pfam PF09084 NMT1/THI5 like 47 260 2.1E-76 T 12-10-2018 IPR015168 SsuA/THI5-like N288_08210 b203641562637c506067ad9f0b21b4ae 332 SUPERFAMILY SSF53850 39 321 2.57E-54 T 12-10-2018 N288_08210 b203641562637c506067ad9f0b21b4ae 332 Gene3D G3DSA:3.40.190.10 42 329 5.9E-108 T 12-10-2018 N288_08210 b203641562637c506067ad9f0b21b4ae 332 Gene3D G3DSA:3.40.190.10 118 220 5.9E-108 T 12-10-2018 N288_05095 d388abd6d5684cea7ac53f1c6718e27e 232 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 7 106 1.8E-17 T 12-10-2018 IPR018745 Domain of unknown function DUF2294 N288_05095 d388abd6d5684cea7ac53f1c6718e27e 232 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 133 228 3.6E-5 T 12-10-2018 IPR018745 Domain of unknown function DUF2294 N288_19650 6c0d6b2bd5bf82e733a10f57896265d3 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 6.3E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_19650 6c0d6b2bd5bf82e733a10f57896265d3 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 6.3E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_19650 6c0d6b2bd5bf82e733a10f57896265d3 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 6.3E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_19650 6c0d6b2bd5bf82e733a10f57896265d3 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 6.3E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_19650 6c0d6b2bd5bf82e733a10f57896265d3 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 6.3E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_19650 6c0d6b2bd5bf82e733a10f57896265d3 288 Pfam PF01039 Carboxyl transferase domain 65 243 2.6E-19 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 N288_19650 6c0d6b2bd5bf82e733a10f57896265d3 288 Gene3D G3DSA:3.90.226.10 30 284 1.3E-87 T 12-10-2018 N288_19650 6c0d6b2bd5bf82e733a10f57896265d3 288 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 18 282 1.0E-127 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_19650 6c0d6b2bd5bf82e733a10f57896265d3 288 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 283 38.967 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_19650 6c0d6b2bd5bf82e733a10f57896265d3 288 SUPERFAMILY SSF52096 30 284 1.6E-79 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_02790 fbb63a835c8a1862b65a22340317de93 247 Gene3D G3DSA:3.40.50.1820 1 246 5.3E-60 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_02790 fbb63a835c8a1862b65a22340317de93 247 PIRSF PIRSF017388 5 247 1.3E-75 T 12-10-2018 IPR012354 Esterase/lipase GO:0052689 N288_02790 fbb63a835c8a1862b65a22340317de93 247 Pfam PF12146 Serine aminopeptidase, S33 23 229 1.0E-21 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 N288_02790 fbb63a835c8a1862b65a22340317de93 247 SUPERFAMILY SSF53474 18 246 2.79E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_11265 06111ff59e1f11e884483272272a5b45 121 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 7 94 3.1E-32 T 12-10-2018 IPR009359 Phenylacetic acid degradation B N288_11265 06111ff59e1f11e884483272272a5b45 121 Gene3D G3DSA:3.10.20.520 3 66 9.5E-16 T 12-10-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B N288_11265 06111ff59e1f11e884483272272a5b45 121 Pfam PF06243 Phenylacetic acid degradation B 7 93 1.8E-27 T 12-10-2018 IPR009359 Phenylacetic acid degradation B N288_11000 8650654a772fafae315492ff61e1b0d7 348 Gene3D G3DSA:3.20.20.30 1 347 1.1E-138 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 N288_11000 8650654a772fafae315492ff61e1b0d7 348 Pfam PF00296 Luciferase-like monooxygenase 1 316 2.6E-81 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 N288_11000 8650654a772fafae315492ff61e1b0d7 348 SUPERFAMILY SSF51679 1 341 2.49E-91 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 N288_22530 d8ce1f8f43b6c75b0fe1a1f194bd3fb9 403 SMART SM00631 46 324 1.6E-5 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 N288_22530 d8ce1f8f43b6c75b0fe1a1f194bd3fb9 403 Pfam PF00246 Zinc carboxypeptidase 54 279 1.4E-23 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 N288_22530 d8ce1f8f43b6c75b0fe1a1f194bd3fb9 403 Gene3D G3DSA:3.40.630.10 41 323 1.2E-35 T 12-10-2018 N288_22530 d8ce1f8f43b6c75b0fe1a1f194bd3fb9 403 SUPERFAMILY SSF53187 46 374 8.93E-39 T 12-10-2018 N288_09580 3f3a6931ade57cf73c69be4d7642769b 76 Gene3D G3DSA:3.30.300.20 1 62 4.5E-6 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta N288_09580 3f3a6931ade57cf73c69be4d7642769b 76 Hamap MF_00088 UPF0109 protein . 1 75 22.464 T 12-10-2018 IPR020627 Uncharacterised protein family UPF0109 N288_09580 3f3a6931ade57cf73c69be4d7642769b 76 Pfam PF13083 KH domain 2 74 3.8E-24 T 12-10-2018 N288_09580 3f3a6931ade57cf73c69be4d7642769b 76 SUPERFAMILY SSF54814 15 59 6.02E-7 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 N288_11220 5258fb3f89ed08930daf2cf8a89bc0e6 773 Pfam PF13538 UvrD-like helicase C-terminal domain 707 750 1.4E-7 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain N288_11220 5258fb3f89ed08930daf2cf8a89bc0e6 773 Gene3D G3DSA:3.40.50.300 463 603 3.1E-8 T 12-10-2018 N288_11220 5258fb3f89ed08930daf2cf8a89bc0e6 773 Gene3D G3DSA:3.40.50.300 202 340 1.4E-10 T 12-10-2018 N288_11220 5258fb3f89ed08930daf2cf8a89bc0e6 773 SUPERFAMILY SSF52540 205 758 5.18E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_11220 5258fb3f89ed08930daf2cf8a89bc0e6 773 Pfam PF13245 AAA domain 217 583 3.9E-9 T 12-10-2018 N288_11220 5258fb3f89ed08930daf2cf8a89bc0e6 773 Gene3D G3DSA:3.40.50.300 605 773 2.5E-50 T 12-10-2018 N288_01750 9f1228eba90a79878f57d94cea60fb6d 746 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 275 2.0E-85 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 N288_01750 9f1228eba90a79878f57d94cea60fb6d 746 Gene3D G3DSA:1.10.486.10 386 549 7.5E-131 T 12-10-2018 N288_01750 9f1228eba90a79878f57d94cea60fb6d 746 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 8 743 0.0 T 12-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 N288_01750 9f1228eba90a79878f57d94cea60fb6d 746 SUPERFAMILY SSF52540 1 645 5.94E-190 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_01750 9f1228eba90a79878f57d94cea60fb6d 746 Gene3D G3DSA:3.40.50.300 283 636 7.5E-131 T 12-10-2018 N288_01750 9f1228eba90a79878f57d94cea60fb6d 746 Gene3D G3DSA:1.10.10.160 116 190 3.3E-111 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily N288_01750 9f1228eba90a79878f57d94cea60fb6d 746 Gene3D G3DSA:3.40.50.300 12 277 3.3E-111 T 12-10-2018 N288_01750 9f1228eba90a79878f57d94cea60fb6d 746 Pfam PF13361 UvrD-like helicase C-terminal domain 280 618 4.7E-76 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 N288_15080 cf7008280e734559854f1cc2335b08a7 269 Gene3D G3DSA:3.60.40.10 31 251 2.0E-5 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_15080 cf7008280e734559854f1cc2335b08a7 269 SUPERFAMILY SSF81606 37 249 9.81E-8 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_15080 cf7008280e734559854f1cc2335b08a7 269 Pfam PF13672 Protein phosphatase 2C 33 216 1.2E-11 T 12-10-2018 N288_00695 eec21c9446b8dcc8d436af20d0b66da9 200 SUPERFAMILY SSF53335 11 198 1.61E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_00695 eec21c9446b8dcc8d436af20d0b66da9 200 Gene3D G3DSA:3.40.50.150 6 200 1.9E-44 T 12-10-2018 N288_00695 eec21c9446b8dcc8d436af20d0b66da9 200 Pfam PF05175 Methyltransferase small domain 28 196 1.1E-48 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 N288_19415 ce61fda0b57889bbb8d1bb50d90af60c 567 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 12-10-2018 IPR020845 AMP-binding, conserved site N288_19415 ce61fda0b57889bbb8d1bb50d90af60c 567 Pfam PF00501 AMP-binding enzyme 31 460 4.3E-114 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 N288_19415 ce61fda0b57889bbb8d1bb50d90af60c 567 SUPERFAMILY SSF56801 18 556 1.27E-161 T 12-10-2018 N288_19415 ce61fda0b57889bbb8d1bb50d90af60c 567 Gene3D G3DSA:3.40.50.12780 13 452 1.7E-131 T 12-10-2018 N288_19415 ce61fda0b57889bbb8d1bb50d90af60c 567 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 545 2.1E-20 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain N288_19415 ce61fda0b57889bbb8d1bb50d90af60c 567 Gene3D G3DSA:3.30.300.310 457 561 3.6E-33 T 12-10-2018 N288_25960 4cee0c26f4110991e18d3eadd135a64c 65 Pfam PF06107 Bacterial protein of unknown function (DUF951) 6 60 9.9E-30 T 12-10-2018 IPR009296 Protein of unknown function DUF951 N288_25960 4cee0c26f4110991e18d3eadd135a64c 65 PIRSF PIRSF037263 1 65 1.5E-34 T 12-10-2018 IPR009296 Protein of unknown function DUF951 N288_15150 ce04139e4c43dcaa45cae631400dc63b 529 Gene3D G3DSA:1.10.1370.30 1 510 9.4E-49 T 12-10-2018 N288_15150 ce04139e4c43dcaa45cae631400dc63b 529 SUPERFAMILY SSF55486 2 522 4.4E-96 T 12-10-2018 N288_15150 ce04139e4c43dcaa45cae631400dc63b 529 Pfam PF01432 Peptidase family M3 129 522 1.6E-13 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 N288_16940 379209609682a481a5115a5dd4a02be5 290 PIRSF PIRSF006483 2 284 2.5E-93 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT N288_16940 379209609682a481a5115a5dd4a02be5 290 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 222 276 1.0E-21 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 N288_16940 379209609682a481a5115a5dd4a02be5 290 Gene3D G3DSA:3.30.70.120 194 269 2.9E-27 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal N288_16940 379209609682a481a5115a5dd4a02be5 290 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 9 216 2.3E-63 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT N288_23690 12b877173b347a06e1eaabc0e3c8c56b 135 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 132 2.0E-14 T 12-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain N288_23690 12b877173b347a06e1eaabc0e3c8c56b 135 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 132 1.4E-40 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23690 12b877173b347a06e1eaabc0e3c8c56b 135 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 24.049 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23690 12b877173b347a06e1eaabc0e3c8c56b 135 SUPERFAMILY SSF46604 87 133 2.17E-6 T 12-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23690 12b877173b347a06e1eaabc0e3c8c56b 135 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 82 2.4E-29 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23690 12b877173b347a06e1eaabc0e3c8c56b 135 SUPERFAMILY SSF51344 2 83 2.49E-24 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23690 12b877173b347a06e1eaabc0e3c8c56b 135 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 88 5.0E-32 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23690 12b877173b347a06e1eaabc0e3c8c56b 135 Gene3D G3DSA:2.60.15.10 1 88 2.8E-33 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23690 12b877173b347a06e1eaabc0e3c8c56b 135 Gene3D G3DSA:1.20.5.440 89 133 1.6E-15 T 12-10-2018 N288_00210 7ba7cb632f7d5f3394647305adacbf02 109 SUPERFAMILY SSF54913 1 107 2.7E-12 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta N288_00210 7ba7cb632f7d5f3394647305adacbf02 109 Gene3D G3DSA:3.30.70.120 1 103 2.9E-43 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal N288_00210 7ba7cb632f7d5f3394647305adacbf02 109 Pfam PF06153 Cyclic-di-AMP receptor 1 109 2.1E-54 T 12-10-2018 IPR010375 Cyclic-di-AMP receptor N288_18630 222347f7b5c85d8b0389dc83fb0dbc50 322 Pfam PF15902 Sortilin, neurotensin receptor 3, 124 253 1.6E-9 T 12-10-2018 IPR031778 Sortilin, N-terminal N288_18630 222347f7b5c85d8b0389dc83fb0dbc50 322 SUPERFAMILY SSF110296 71 315 2.62E-24 T 12-10-2018 N288_18630 222347f7b5c85d8b0389dc83fb0dbc50 322 Gene3D G3DSA:2.130.10.10 83 320 2.9E-14 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 N288_08750 3d7b5e6ac466767fce6b08c580a6f42e 69 Gene3D G3DSA:3.10.20.730 1 58 3.2E-24 T 12-10-2018 N288_08750 3d7b5e6ac466767fce6b08c580a6f42e 69 Pfam PF07288 Protein of unknown function (DUF1447) 2 68 2.3E-27 T 12-10-2018 IPR009907 Protein of unknown function DUF1447 N288_08750 3d7b5e6ac466767fce6b08c580a6f42e 69 Hamap MF_01553 UPF0356 protein . 1 69 20.94 T 12-10-2018 IPR009907 Protein of unknown function DUF1447 N288_08750 3d7b5e6ac466767fce6b08c580a6f42e 69 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 1 68 1.0E-18 T 12-10-2018 IPR009907 Protein of unknown function DUF1447 N288_20740 c76180371d787d6d43f259d80c7c8189 206 Pfam PF00929 Exonuclease 8 174 7.2E-21 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III N288_20740 c76180371d787d6d43f259d80c7c8189 206 SMART SM00479 6 183 8.2E-22 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III N288_20740 c76180371d787d6d43f259d80c7c8189 206 Gene3D G3DSA:3.30.420.10 2 200 1.8E-38 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 N288_20740 c76180371d787d6d43f259d80c7c8189 206 SUPERFAMILY SSF53098 6 181 1.11E-27 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily N288_14875 b98dc796a9baabcb20d6f12f04e294d2 288 Gene3D G3DSA:1.10.3720.10 64 288 1.4E-8 T 12-10-2018 IPR035906 MetI-like superfamily N288_14875 b98dc796a9baabcb20d6f12f04e294d2 288 SUPERFAMILY SSF161098 70 270 7.36E-11 T 12-10-2018 IPR035906 MetI-like superfamily N288_14875 b98dc796a9baabcb20d6f12f04e294d2 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 284 2.4E-7 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_13375 6e33e7a0aeee84a6b4eeeffa26884585 344 Pfam PF00487 Fatty acid desaturase 57 293 1.6E-34 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 N288_02950 d62978fda0d13bba9b018df9f80c314d 289 Pfam PF00005 ABC transporter 16 146 1.1E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_02950 d62978fda0d13bba9b018df9f80c314d 289 SMART SM00382 25 195 2.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_02950 d62978fda0d13bba9b018df9f80c314d 289 SUPERFAMILY SSF52540 3 201 4.7E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_02950 d62978fda0d13bba9b018df9f80c314d 289 Gene3D G3DSA:3.40.50.300 1 227 2.5E-53 T 12-10-2018 N288_02950 d62978fda0d13bba9b018df9f80c314d 289 ProSitePatterns PS00211 ABC transporters family signature. 118 132 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_03700 6a83b2a3094c22ed33f7bea23118d035 557 SUPERFAMILY SSF56645 72 283 4.58E-40 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 N288_03700 6a83b2a3094c22ed33f7bea23118d035 557 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 262 4.3E-21 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 N288_03700 6a83b2a3094c22ed33f7bea23118d035 557 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 273 429 5.2E-31 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 N288_03700 6a83b2a3094c22ed33f7bea23118d035 557 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 390 409 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 N288_03700 6a83b2a3094c22ed33f7bea23118d035 557 SUPERFAMILY SSF47203 273 434 7.73E-36 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 N288_03700 6a83b2a3094c22ed33f7bea23118d035 557 Gene3D G3DSA:1.20.140.10 274 432 2.0E-36 T 12-10-2018 N288_03700 6a83b2a3094c22ed33f7bea23118d035 557 Gene3D G3DSA:2.40.110.20 120 272 9.7E-40 T 12-10-2018 N288_12340 c5e61b32622d0b8c404597423bd3f8ae 274 SUPERFAMILY SSF52402 3 273 1.47E-81 T 12-10-2018 N288_12340 c5e61b32622d0b8c404597423bd3f8ae 274 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 18 267 49.051 T 12-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 N288_12340 c5e61b32622d0b8c404597423bd3f8ae 274 TIGRFAM TIGR00552 nadE: NAD+ synthetase 17 274 5.6E-77 T 12-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 N288_12340 c5e61b32622d0b8c404597423bd3f8ae 274 Gene3D G3DSA:3.40.50.620 1 274 4.5E-85 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_12340 c5e61b32622d0b8c404597423bd3f8ae 274 Pfam PF02540 NAD synthase 23 264 1.3E-71 T 12-10-2018 IPR022310 NAD/GMP synthase N288_00750 1b7c76d1118b294a263f24a992078df9 207 Gene3D G3DSA:3.40.1370.10 3 207 9.5E-85 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 N288_00750 1b7c76d1118b294a263f24a992078df9 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 38.077 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00750 1b7c76d1118b294a263f24a992078df9 207 Pfam PF00573 Ribosomal protein L4/L1 family 17 204 4.6E-76 T 12-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 N288_00750 1b7c76d1118b294a263f24a992078df9 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 204 1.3E-83 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00750 1b7c76d1118b294a263f24a992078df9 207 SUPERFAMILY SSF52166 1 206 2.35E-86 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 N288_20660 8de3bb13fc1d705358521648f3e12f16 449 Gene3D G3DSA:3.40.50.10490 58 226 1.4E-151 T 12-10-2018 N288_20660 8de3bb13fc1d705358521648f3e12f16 449 Pfam PF00342 Phosphoglucose isomerase 76 296 1.0E-19 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_20660 8de3bb13fc1d705358521648f3e12f16 449 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 202 215 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_20660 8de3bb13fc1d705358521648f3e12f16 449 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 408 425 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_20660 8de3bb13fc1d705358521648f3e12f16 449 Gene3D G3DSA:3.40.50.10490 1 57 1.2E-19 T 12-10-2018 N288_20660 8de3bb13fc1d705358521648f3e12f16 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 408 421 8.7E-28 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_20660 8de3bb13fc1d705358521648f3e12f16 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 76 95 8.7E-28 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_20660 8de3bb13fc1d705358521648f3e12f16 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 198 216 8.7E-28 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_20660 8de3bb13fc1d705358521648f3e12f16 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 394 408 8.7E-28 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_20660 8de3bb13fc1d705358521648f3e12f16 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 273 294 8.7E-28 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_20660 8de3bb13fc1d705358521648f3e12f16 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 376 394 8.7E-28 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_20660 8de3bb13fc1d705358521648f3e12f16 449 Gene3D G3DSA:3.40.50.10490 227 417 1.4E-151 T 12-10-2018 N288_20660 8de3bb13fc1d705358521648f3e12f16 449 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 435 26.83 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_20660 8de3bb13fc1d705358521648f3e12f16 449 SUPERFAMILY SSF53697 5 447 1.0E-146 T 12-10-2018 N288_21830 ce6c4ba5b12d1ec5d1efdadf072e6293 343 Pfam PF09383 NIL domain 266 336 3.4E-21 T 12-10-2018 IPR018449 NIL domain N288_21830 ce6c4ba5b12d1ec5d1efdadf072e6293 343 Gene3D G3DSA:3.40.50.300 1 232 1.1E-75 T 12-10-2018 N288_21830 ce6c4ba5b12d1ec5d1efdadf072e6293 343 Gene3D G3DSA:3.30.70.260 233 339 1.4E-29 T 12-10-2018 N288_21830 ce6c4ba5b12d1ec5d1efdadf072e6293 343 Pfam PF00005 ABC transporter 21 169 2.6E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_21830 ce6c4ba5b12d1ec5d1efdadf072e6293 343 SMART SM00382 30 226 6.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_21830 ce6c4ba5b12d1ec5d1efdadf072e6293 343 SMART SM00930 263 338 3.8E-26 T 12-10-2018 IPR018449 NIL domain N288_21830 ce6c4ba5b12d1ec5d1efdadf072e6293 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_21830 ce6c4ba5b12d1ec5d1efdadf072e6293 343 SUPERFAMILY SSF52540 1 240 5.58E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_21830 ce6c4ba5b12d1ec5d1efdadf072e6293 343 SUPERFAMILY SSF55021 252 339 1.83E-21 T 12-10-2018 N288_25060 e67b3f321f581a69ed0dc5736c88c992 147 Gene3D G3DSA:3.40.630.30 2 136 8.9E-23 T 12-10-2018 N288_25060 e67b3f321f581a69ed0dc5736c88c992 147 SUPERFAMILY SSF55729 3 133 1.72E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_25060 e67b3f321f581a69ed0dc5736c88c992 147 Pfam PF13673 Acetyltransferase (GNAT) domain 25 130 2.3E-15 T 12-10-2018 IPR000182 GNAT domain N288_04430 90504c611539719f32530275d531cfb1 189 Gene3D G3DSA:1.10.357.10 5 184 1.9E-39 T 12-10-2018 N288_04430 90504c611539719f32530275d531cfb1 189 Pfam PF14278 Transcriptional regulator C-terminal region 88 163 2.4E-14 T 12-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type N288_04430 90504c611539719f32530275d531cfb1 189 SUPERFAMILY SSF46689 7 75 1.54E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_07920 6415d9ca3bceee6c535d79183dd64704 275 SMART SM00382 30 201 2.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_07920 6415d9ca3bceee6c535d79183dd64704 275 Gene3D G3DSA:3.40.50.300 1 224 3.2E-47 T 12-10-2018 N288_07920 6415d9ca3bceee6c535d79183dd64704 275 Pfam PF00005 ABC transporter 21 153 4.5E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_07920 6415d9ca3bceee6c535d79183dd64704 275 SUPERFAMILY SSF52540 4 205 2.07E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_01365 cfc39b44739626243790e4e810e9929b 114 Gene3D G3DSA:1.10.3730.20 1 109 9.6E-33 T 12-10-2018 N288_01365 cfc39b44739626243790e4e810e9929b 114 Pfam PF00893 Small Multidrug Resistance protein 1 93 2.6E-28 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 N288_01365 cfc39b44739626243790e4e810e9929b 114 SUPERFAMILY SSF103481 4 105 3.79E-20 T 12-10-2018 N288_13655 2e5fb1f668e0d56a4d078ed2874e11d1 177 SUPERFAMILY SSF55729 2 174 1.64E-52 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_13655 2e5fb1f668e0d56a4d078ed2874e11d1 177 Gene3D G3DSA:3.40.630.30 3 174 6.7E-51 T 12-10-2018 N288_13655 2e5fb1f668e0d56a4d078ed2874e11d1 177 Pfam PF13302 Acetyltransferase (GNAT) domain 9 149 1.7E-31 T 12-10-2018 IPR000182 GNAT domain N288_16210 f41d7718f9e28515d768a70502270c3d 220 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 211 6.6E-88 T 12-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 N288_16210 f41d7718f9e28515d768a70502270c3d 220 Pfam PF01144 Coenzyme A transferase 10 203 1.5E-34 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 N288_16210 f41d7718f9e28515d768a70502270c3d 220 SUPERFAMILY SSF100950 6 217 3.59E-65 T 12-10-2018 IPR037171 NagB/RpiA transferase-like N288_16210 f41d7718f9e28515d768a70502270c3d 220 SMART SM00882 9 205 8.1E-55 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 N288_16210 f41d7718f9e28515d768a70502270c3d 220 Gene3D G3DSA:3.40.1080.10 5 217 4.2E-86 T 12-10-2018 N288_16960 b66c9318cf3bba42051b4a0571ddc1a8 255 PIRSF PIRSF036636 1 255 7.1E-146 T 12-10-2018 IPR012049 Menaquinone:cytochrome c reductase, cytochrome b/c subunit GO:0005506|GO:0009055|GO:0016021|GO:0020037 N288_16960 b66c9318cf3bba42051b4a0571ddc1a8 255 Gene3D G3DSA:1.10.760.10 181 252 9.5E-15 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 N288_16960 b66c9318cf3bba42051b4a0571ddc1a8 255 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 71 159 1.2E-9 T 12-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 N288_16960 b66c9318cf3bba42051b4a0571ddc1a8 255 Gene3D G3DSA:1.20.810.10 14 173 3.3E-26 T 12-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 N288_16960 b66c9318cf3bba42051b4a0571ddc1a8 255 SUPERFAMILY SSF81648 21 156 4.58E-31 T 12-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 N288_16960 b66c9318cf3bba42051b4a0571ddc1a8 255 SUPERFAMILY SSF46626 137 252 9.05E-14 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 N288_16960 b66c9318cf3bba42051b4a0571ddc1a8 255 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 181 249 1.3E-13 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_11045 b69479d6d25adacaee6588dfd1805e1b 394 SMART SM00863 181 223 1.4E-10 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 N288_11045 b69479d6d25adacaee6588dfd1805e1b 394 SUPERFAMILY SSF50447 2 73 2.93E-17 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily N288_11045 b69479d6d25adacaee6588dfd1805e1b 394 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 181 221 4.1E-8 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 N288_11045 b69479d6d25adacaee6588dfd1805e1b 394 Gene3D G3DSA:3.10.310.40 290 394 4.1E-14 T 12-10-2018 N288_11045 b69479d6d25adacaee6588dfd1805e1b 394 Gene3D G3DSA:2.40.30.130 1 85 7.9E-30 T 12-10-2018 N288_11045 b69479d6d25adacaee6588dfd1805e1b 394 SUPERFAMILY SSF55186 89 229 1.09E-34 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 N288_11045 b69479d6d25adacaee6588dfd1805e1b 394 Gene3D G3DSA:3.30.980.10 86 240 2.3E-45 T 12-10-2018 N288_11045 b69479d6d25adacaee6588dfd1805e1b 394 Pfam PF02272 DHHA1 domain 261 390 2.9E-11 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 N288_11045 b69479d6d25adacaee6588dfd1805e1b 394 Pfam PF01411 tRNA synthetases class II (A) 25 87 2.7E-7 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 N288_02140 1e3d090c79671dfc9c67645d3be39a2e 499 ProSitePatterns PS01163 Galactose-1-phosphate uridyl transferase family 2 signature. 259 276 - T 12-10-2018 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 N288_02140 1e3d090c79671dfc9c67645d3be39a2e 499 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 19 230 3.0E-37 T 12-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 N288_02140 1e3d090c79671dfc9c67645d3be39a2e 499 Hamap MF_00571 Galactose-1-phosphate uridylyltransferase [galT]. 1 499 247.649 T 12-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 N288_02140 1e3d090c79671dfc9c67645d3be39a2e 499 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 247 440 1.9E-33 T 12-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 N288_02140 1e3d090c79671dfc9c67645d3be39a2e 499 PIRSF PIRSF006005 1 497 9.1E-215 T 12-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 N288_02140 1e3d090c79671dfc9c67645d3be39a2e 499 TIGRFAM TIGR01239 galT_2: galactose-1-phosphate uridylyltransferase 7 494 4.7E-206 T 12-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 N288_10750 7a2f4f8cb518a670baeeb54e2e1df78e 330 Gene3D G3DSA:2.160.20.10 1 329 4.4E-103 T 12-10-2018 IPR012334 Pectin lyase fold N288_10750 7a2f4f8cb518a670baeeb54e2e1df78e 330 ProSitePatterns PS00800 Pectinesterase signature 1. 25 44 - T 12-10-2018 IPR018040 Pectinesterase, Tyr active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 N288_10750 7a2f4f8cb518a670baeeb54e2e1df78e 330 SUPERFAMILY SSF51126 2 327 1.8E-77 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor N288_10750 7a2f4f8cb518a670baeeb54e2e1df78e 330 Pfam PF01095 Pectinesterase 150 310 1.4E-38 T 12-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 N288_10750 7a2f4f8cb518a670baeeb54e2e1df78e 330 Pfam PF01095 Pectinesterase 2 138 1.1E-28 T 12-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 N288_10750 7a2f4f8cb518a670baeeb54e2e1df78e 330 ProSitePatterns PS00503 Pectinesterase signature 2. 172 181 - T 12-10-2018 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 N288_21030 f7084fc872f840ddd5a43d5578f44f06 434 Pfam PF00563 EAL domain 199 424 3.7E-52 T 12-10-2018 IPR001633 EAL domain N288_21030 f7084fc872f840ddd5a43d5578f44f06 434 SUPERFAMILY SSF141868 196 424 9.15E-58 T 12-10-2018 IPR035919 EAL domain superfamily N288_21030 f7084fc872f840ddd5a43d5578f44f06 434 SMART SM00052 187 429 1.7E-45 T 12-10-2018 IPR001633 EAL domain N288_21030 f7084fc872f840ddd5a43d5578f44f06 434 Gene3D G3DSA:3.20.20.450 190 429 5.3E-59 T 12-10-2018 IPR035919 EAL domain superfamily N288_12160 c7cb847c5e2a064f182af2dd8b3d3ce3 300 Gene3D G3DSA:3.20.20.100 2 300 7.5E-103 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily N288_12160 c7cb847c5e2a064f182af2dd8b3d3ce3 300 SUPERFAMILY SSF51430 3 295 8.38E-78 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily N288_12160 c7cb847c5e2a064f182af2dd8b3d3ce3 300 PRINTS PR00069 Aldo-keto reductase signature 143 160 3.4E-7 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_12160 c7cb847c5e2a064f182af2dd8b3d3ce3 300 PRINTS PR00069 Aldo-keto reductase signature 112 130 3.4E-7 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_12160 c7cb847c5e2a064f182af2dd8b3d3ce3 300 Pfam PF00248 Aldo/keto reductase family 14 290 1.2E-61 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain N288_03640 3559c1d25aafde044ef4e17ddb70935d 303 SUPERFAMILY SSF110581 4 301 1.07E-118 T 12-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 N288_03640 3559c1d25aafde044ef4e17ddb70935d 303 Gene3D G3DSA:3.40.1790.10 2 303 2.1E-139 T 12-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 N288_03640 3559c1d25aafde044ef4e17ddb70935d 303 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 10 303 44.252 T 12-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 N288_03640 3559c1d25aafde044ef4e17ddb70935d 303 Pfam PF04227 Indigoidine synthase A like protein 11 299 2.0E-134 T 12-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 N288_05740 4c123810b7caa2e61d69aad436f8a606 263 Pfam PF06182 ABC-2 family transporter protein 31 262 4.4E-19 T 12-10-2018 IPR010390 Protein of unknown function DUF990 N288_00665 2d17f7f4a84356baad81480bfa228fbf 47 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 47 16.584 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00665 2d17f7f4a84356baad81480bfa228fbf 47 Pfam PF00471 Ribosomal protein L33 3 47 1.0E-18 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00665 2d17f7f4a84356baad81480bfa228fbf 47 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 47 2.6E-16 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00665 2d17f7f4a84356baad81480bfa228fbf 47 Gene3D G3DSA:2.20.28.120 1 47 2.5E-18 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00665 2d17f7f4a84356baad81480bfa228fbf 47 SUPERFAMILY SSF57829 1 47 1.4E-15 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 N288_09810 e24c7a5a68c26253c4f8df49c59f280f 363 Gene3D G3DSA:3.40.50.2300 2 140 6.5E-33 T 12-10-2018 N288_09810 e24c7a5a68c26253c4f8df49c59f280f 363 SUPERFAMILY SSF52172 1 109 9.68E-28 T 12-10-2018 IPR011006 CheY-like superfamily N288_09810 e24c7a5a68c26253c4f8df49c59f280f 363 Gene3D G3DSA:3.40.50.180 172 363 2.0E-67 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal N288_09810 e24c7a5a68c26253c4f8df49c59f280f 363 Pfam PF00072 Response regulator receiver domain 6 110 9.0E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_09810 e24c7a5a68c26253c4f8df49c59f280f 363 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 363 37.341 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 N288_09810 e24c7a5a68c26253c4f8df49c59f280f 363 Pfam PF01339 CheB methylesterase 179 359 2.4E-56 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 N288_09810 e24c7a5a68c26253c4f8df49c59f280f 363 SUPERFAMILY SSF52738 177 362 7.19E-60 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal N288_09810 e24c7a5a68c26253c4f8df49c59f280f 363 PIRSF PIRSF000876 1 363 1.6E-129 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 N288_09810 e24c7a5a68c26253c4f8df49c59f280f 363 SMART SM00448 4 127 9.2E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_07985 6a3e40d499d9a45488f825f3566e4262 309 Gene3D G3DSA:2.30.30.40 2 114 1.2E-38 T 12-10-2018 N288_07985 6a3e40d499d9a45488f825f3566e4262 309 Pfam PF00877 NlpC/P60 family 195 302 3.0E-24 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain N288_07985 6a3e40d499d9a45488f825f3566e4262 309 SUPERFAMILY SSF54001 179 304 8.83E-38 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily N288_07985 6a3e40d499d9a45488f825f3566e4262 309 Gene3D G3DSA:3.90.1720.10 176 309 1.1E-36 T 12-10-2018 N288_07985 6a3e40d499d9a45488f825f3566e4262 309 Gene3D G3DSA:2.30.30.40 115 175 3.8E-5 T 12-10-2018 N288_17280 0b9ed3c93973752096550cd9cf328379 306 Gene3D G3DSA:2.70.70.10 26 167 2.8E-40 T 12-10-2018 IPR011055 Duplicated hybrid motif N288_17280 0b9ed3c93973752096550cd9cf328379 306 Pfam PF01476 LysM domain 264 303 6.8E-12 T 12-10-2018 IPR018392 LysM domain N288_17280 0b9ed3c93973752096550cd9cf328379 306 SMART SM00257 263 306 2.3E-11 T 12-10-2018 IPR018392 LysM domain N288_17280 0b9ed3c93973752096550cd9cf328379 306 Gene3D G3DSA:3.10.350.10 260 305 3.6E-14 T 12-10-2018 IPR036779 LysM domain superfamily N288_17280 0b9ed3c93973752096550cd9cf328379 306 SUPERFAMILY SSF51261 39 162 1.94E-44 T 12-10-2018 IPR011055 Duplicated hybrid motif N288_17280 0b9ed3c93973752096550cd9cf328379 306 Pfam PF01551 Peptidase family M23 60 159 1.7E-32 T 12-10-2018 IPR016047 Peptidase M23 N288_17280 0b9ed3c93973752096550cd9cf328379 306 SUPERFAMILY SSF54106 263 303 1.7E-9 T 12-10-2018 N288_12995 1cfb847e2e1846d3bc4f1dc1ed12ff11 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 1 247 2.4E-85 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_12995 1cfb847e2e1846d3bc4f1dc1ed12ff11 248 Pfam PF00557 Metallopeptidase family M24 11 240 8.0E-44 T 12-10-2018 IPR000994 Peptidase M24 N288_12995 1cfb847e2e1846d3bc4f1dc1ed12ff11 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 1.4E-18 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_12995 1cfb847e2e1846d3bc4f1dc1ed12ff11 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 88 104 1.4E-18 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_12995 1cfb847e2e1846d3bc4f1dc1ed12ff11 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 1.4E-18 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_12995 1cfb847e2e1846d3bc4f1dc1ed12ff11 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 1.4E-18 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_12995 1cfb847e2e1846d3bc4f1dc1ed12ff11 248 Hamap MF_01974 Methionine aminopeptidase [map]. 1 248 33.665 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 N288_12995 1cfb847e2e1846d3bc4f1dc1ed12ff11 248 SUPERFAMILY SSF55920 2 247 5.63E-70 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like N288_12995 1cfb847e2e1846d3bc4f1dc1ed12ff11 248 Gene3D G3DSA:3.90.230.10 1 248 3.1E-86 T 12-10-2018 N288_13575 5c2f2abc9bded53e6bf7ec697429bd99 115 SUPERFAMILY SSF52172 1 111 5.96E-5 T 12-10-2018 IPR011006 CheY-like superfamily N288_07755 88ce99bf92b18eb3e2f7893dcc87dbfa 182 Pfam PF14153 Spore coat protein CotO 3 180 1.4E-59 T 12-10-2018 IPR025439 Spore coat protein CotO N288_06695 2eab02868875a1519eb7779d96e17d9d 304 Pfam PF08338 Domain of unknown function (DUF1731) 254 303 2.3E-12 T 12-10-2018 IPR013549 Domain of unknown function DUF1731 N288_06695 2eab02868875a1519eb7779d96e17d9d 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 133 6.3E-10 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 N288_06695 2eab02868875a1519eb7779d96e17d9d 304 Gene3D G3DSA:3.40.50.720 1 294 6.2E-64 T 12-10-2018 N288_06695 2eab02868875a1519eb7779d96e17d9d 304 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 5 300 1.3E-72 T 12-10-2018 IPR010099 Epimerase family protein SDR39U1 N288_06695 2eab02868875a1519eb7779d96e17d9d 304 SUPERFAMILY SSF51735 1 303 2.26E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_17705 106c4fa8710244057947a466823f07ab 373 Gene3D G3DSA:3.40.50.300 94 303 6.2E-80 T 12-10-2018 N288_17705 106c4fa8710244057947a466823f07ab 373 Gene3D G3DSA:1.10.287.130 306 371 5.4E-17 T 12-10-2018 N288_17705 106c4fa8710244057947a466823f07ab 373 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 60 363 2.2E-101 T 12-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 N288_17705 106c4fa8710244057947a466823f07ab 373 Pfam PF03308 ArgK protein 65 335 2.5E-104 T 12-10-2018 N288_17705 106c4fa8710244057947a466823f07ab 373 SUPERFAMILY SSF52540 49 368 8.31E-90 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_17705 106c4fa8710244057947a466823f07ab 373 Gene3D G3DSA:1.20.5.170 49 93 9.5E-16 T 12-10-2018 N288_13990 a8b2afeba133eb83fad91afd4d3dc5fa 68 SMART SM00530 4 59 3.3E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_13990 a8b2afeba133eb83fad91afd4d3dc5fa 68 SUPERFAMILY SSF47413 2 63 3.1E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_13990 a8b2afeba133eb83fad91afd4d3dc5fa 68 Pfam PF01381 Helix-turn-helix 5 58 1.2E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_13990 a8b2afeba133eb83fad91afd4d3dc5fa 68 Gene3D G3DSA:1.10.260.40 1 65 3.2E-25 T 12-10-2018 N288_12915 fb83619f4d3c03d7a788c1e497c69d6c 165 Gene3D G3DSA:3.30.479.10 34 110 4.9E-24 T 12-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 N288_12915 fb83619f4d3c03d7a788c1e497c69d6c 165 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 39 160 1.5E-35 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 N288_12915 fb83619f4d3c03d7a788c1e497c69d6c 165 SUPERFAMILY SSF55620 33 160 1.11E-38 T 12-10-2018 N288_12915 fb83619f4d3c03d7a788c1e497c69d6c 165 PIRSF PIRSF006113 34 160 2.3E-25 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 N288_12915 fb83619f4d3c03d7a788c1e497c69d6c 165 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 39 128 3.2E-30 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 N288_12915 fb83619f4d3c03d7a788c1e497c69d6c 165 Gene3D G3DSA:3.30.479.10 111 165 1.2E-9 T 12-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 N288_22160 d0111f75814e42eee8854a50b5997cbc 305 TIGRFAM TIGR04399 acc_Sec_SLAP: accessory Sec system S-layer assembly protein 4 297 3.9E-124 T 12-10-2018 IPR030911 Accessory Sec system S-layer assembly protein N288_22160 d0111f75814e42eee8854a50b5997cbc 305 TIGRFAM TIGR04398 SLAP_DUP: SLAP domain 44 165 7.8E-38 T 12-10-2018 IPR030910 SLAP domain, Bacillus-type N288_22160 d0111f75814e42eee8854a50b5997cbc 305 TIGRFAM TIGR04398 SLAP_DUP: SLAP domain 174 295 6.2E-44 T 12-10-2018 IPR030910 SLAP domain, Bacillus-type N288_21105 baa8bc6754feb4d9f77dac8c574ec8a6 281 Pfam PF01904 Protein of unknown function DUF72 16 264 1.8E-58 T 12-10-2018 IPR002763 Protein of unknown function DUF72 N288_21105 baa8bc6754feb4d9f77dac8c574ec8a6 281 SUPERFAMILY SSF117396 1 268 1.57E-84 T 12-10-2018 IPR036520 UPF0759 superfamily N288_21105 baa8bc6754feb4d9f77dac8c574ec8a6 281 Gene3D G3DSA:3.20.20.410 1 281 1.2E-96 T 12-10-2018 IPR036520 UPF0759 superfamily N288_18500 9e517254d6c90ca4a8bbd43b91d5b198 379 SMART SM00729 2 222 4.2E-61 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 N288_18500 9e517254d6c90ca4a8bbd43b91d5b198 379 Pfam PF04055 Radical SAM superfamily 7 176 1.3E-25 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 N288_18500 9e517254d6c90ca4a8bbd43b91d5b198 379 Gene3D G3DSA:3.80.30.20 3 301 1.7E-105 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe N288_18500 9e517254d6c90ca4a8bbd43b91d5b198 379 Pfam PF06969 HemN C-terminal domain 302 366 2.8E-15 T 12-10-2018 IPR010723 HemN, C-terminal N288_18500 9e517254d6c90ca4a8bbd43b91d5b198 379 SUPERFAMILY SSF102114 5 376 8.63E-123 T 12-10-2018 N288_18500 9e517254d6c90ca4a8bbd43b91d5b198 379 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 4 358 1.0E-128 T 12-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 N288_17980 a185b5db64e0dbbee4ca886e745323bf 448 PIRSF PIRSF006815 3 447 1.4E-187 T 12-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 N288_17980 a185b5db64e0dbbee4ca886e745323bf 448 Pfam PF02347 Glycine cleavage system P-protein 3 442 1.6E-160 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 N288_17980 a185b5db64e0dbbee4ca886e745323bf 448 SUPERFAMILY SSF53383 3 443 1.11E-118 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_17980 a185b5db64e0dbbee4ca886e745323bf 448 Gene3D G3DSA:3.40.640.10 84 349 7.5E-165 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_17980 a185b5db64e0dbbee4ca886e745323bf 448 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 3 446 50.448 T 12-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 N288_17980 a185b5db64e0dbbee4ca886e745323bf 448 Gene3D G3DSA:3.90.1150.10 73 443 7.5E-165 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_25965 3a37bf216a15d0ca3dc4b23821035f1e 296 Gene3D G3DSA:3.30.70.100 185 272 1.5E-25 T 12-10-2018 N288_25965 3a37bf216a15d0ca3dc4b23821035f1e 296 SUPERFAMILY SSF82861 30 118 1.96E-14 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 N288_25965 3a37bf216a15d0ca3dc4b23821035f1e 296 Gene3D G3DSA:2.30.30.60 135 183 7.1E-24 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily N288_25965 3a37bf216a15d0ca3dc4b23821035f1e 296 SUPERFAMILY SSF82689 186 284 5.1E-19 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 N288_25965 3a37bf216a15d0ca3dc4b23821035f1e 296 Pfam PF00924 Mechanosensitive ion channel 77 274 1.5E-51 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 N288_25965 3a37bf216a15d0ca3dc4b23821035f1e 296 SUPERFAMILY SSF50182 119 181 2.42E-16 T 12-10-2018 IPR010920 LSM domain superfamily N288_25410 e61aadd924bdaa201d532e6b9e0d6360 193 PIRSF PIRSF001296 4 193 1.6E-71 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 N288_25410 e61aadd924bdaa201d532e6b9e0d6360 193 Pfam PF02669 K+-transporting ATPase, c chain 12 189 2.5E-71 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 N288_25410 e61aadd924bdaa201d532e6b9e0d6360 193 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 5 191 32.235 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 N288_25410 e61aadd924bdaa201d532e6b9e0d6360 193 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 12 191 3.0E-56 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 N288_23630 1f6c4b5b4c8b12918b3941716cc5db68 78 TIGRFAM TIGR02327 int_mem_ywzB: conserved hypothetical integral membrane protein 11 73 2.0E-24 T 12-10-2018 IPR009526 Protein of unknown function DUF1146 N288_23630 1f6c4b5b4c8b12918b3941716cc5db68 78 Pfam PF06612 Protein of unknown function (DUF1146) 17 64 5.7E-22 T 12-10-2018 IPR009526 Protein of unknown function DUF1146 N288_13935 87770a385a63713ce42a6498c239378c 251 Gene3D G3DSA:3.40.50.720 2 251 8.9E-82 T 12-10-2018 N288_13935 87770a385a63713ce42a6498c239378c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.8E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13935 87770a385a63713ce42a6498c239378c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.8E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13935 87770a385a63713ce42a6498c239378c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 5.8E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13935 87770a385a63713ce42a6498c239378c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.8E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13935 87770a385a63713ce42a6498c239378c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.8E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13935 87770a385a63713ce42a6498c239378c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.8E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13935 87770a385a63713ce42a6498c239378c 251 SUPERFAMILY SSF51735 4 248 3.89E-80 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_13935 87770a385a63713ce42a6498c239378c 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.2E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13935 87770a385a63713ce42a6498c239378c 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.2E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13935 87770a385a63713ce42a6498c239378c 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.2E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13935 87770a385a63713ce42a6498c239378c 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 248 9.0E-67 T 12-10-2018 N288_06290 6408ac7edce477f64bce917cd0d64b5e 405 Pfam PF07690 Major Facilitator Superfamily 12 346 8.3E-23 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_06290 6408ac7edce477f64bce917cd0d64b5e 405 Gene3D G3DSA:1.20.1250.20 1 397 9.3E-39 T 12-10-2018 N288_06290 6408ac7edce477f64bce917cd0d64b5e 405 SUPERFAMILY SSF103473 5 399 3.27E-39 T 12-10-2018 IPR036259 MFS transporter superfamily N288_00830 a7d2487e0ded8a2c910c97431a101d41 60 Gene3D G3DSA:3.30.1390.20 1 59 1.5E-29 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily N288_00830 a7d2487e0ded8a2c910c97431a101d41 60 SUPERFAMILY SSF55129 3 59 5.23E-22 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily N288_00830 a7d2487e0ded8a2c910c97431a101d41 60 PIRSF PIRSF002211 1 60 1.6E-31 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00830 a7d2487e0ded8a2c910c97431a101d41 60 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 12-10-2018 IPR018038 Ribosomal protein L30, conserved site N288_00830 a7d2487e0ded8a2c910c97431a101d41 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 1.5E-29 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00830 a7d2487e0ded8a2c910c97431a101d41 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 20.627 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00830 a7d2487e0ded8a2c910c97431a101d41 60 Pfam PF00327 Ribosomal protein L30p/L7e 6 55 5.2E-23 T 12-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain N288_10815 1a72b9c6f9a0b696193bd4e3200b503b 286 Gene3D G3DSA:3.20.20.150 2 275 2.5E-42 T 12-10-2018 N288_10815 1a72b9c6f9a0b696193bd4e3200b503b 286 Pfam PF01261 Xylose isomerase-like TIM barrel 24 221 1.1E-25 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain N288_10815 1a72b9c6f9a0b696193bd4e3200b503b 286 SUPERFAMILY SSF51658 1 257 2.07E-33 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily N288_13250 75737909ebf9d8082ef0c771b80b6d60 213 SUPERFAMILY SSF75615 111 185 1.96E-16 T 12-10-2018 N288_13250 75737909ebf9d8082ef0c771b80b6d60 213 Gene3D G3DSA:1.10.8.610 128 202 3.6E-18 T 12-10-2018 N288_13250 75737909ebf9d8082ef0c771b80b6d60 213 SUPERFAMILY SSF51735 2 101 6.26E-18 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_13250 75737909ebf9d8082ef0c771b80b6d60 213 Gene3D G3DSA:3.40.50.720 1 127 7.8E-33 T 12-10-2018 N288_13250 75737909ebf9d8082ef0c771b80b6d60 213 Pfam PF14824 Sirohaem biosynthesis protein central 116 141 7.7E-11 T 12-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 N288_13250 75737909ebf9d8082ef0c771b80b6d60 213 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 3 194 1.5E-34 T 12-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 N288_13250 75737909ebf9d8082ef0c771b80b6d60 213 Pfam PF13241 Putative NAD(P)-binding 4 112 8.0E-22 T 12-10-2018 N288_01330 42e7693a55054d44942ae7dbb5d0d141 193 Pfam PF01923 Cobalamin adenosyltransferase 3 167 2.4E-55 T 12-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 N288_01330 42e7693a55054d44942ae7dbb5d0d141 193 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 180 4.0E-60 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 N288_01330 42e7693a55054d44942ae7dbb5d0d141 193 Gene3D G3DSA:1.20.1200.10 12 193 2.7E-64 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 N288_01330 42e7693a55054d44942ae7dbb5d0d141 193 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 178 7.6E-61 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 N288_01330 42e7693a55054d44942ae7dbb5d0d141 193 SUPERFAMILY SSF89028 1 179 2.35E-62 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 N288_25715 0e0f516d6243ef32f0049eb3c71edcaf 272 Gene3D G3DSA:3.40.50.300 3 257 2.8E-70 T 12-10-2018 N288_25715 0e0f516d6243ef32f0049eb3c71edcaf 272 SUPERFAMILY SSF52540 7 233 2.09E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_25715 0e0f516d6243ef32f0049eb3c71edcaf 272 SMART SM00382 31 220 1.5E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_25715 0e0f516d6243ef32f0049eb3c71edcaf 272 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_25715 0e0f516d6243ef32f0049eb3c71edcaf 272 Pfam PF00005 ABC transporter 22 170 1.0E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_07705 b2739bbdfb330f1e999d8dd0bbf21253 206 Gene3D G3DSA:1.10.530.10 71 204 1.3E-45 T 12-10-2018 N288_07705 b2739bbdfb330f1e999d8dd0bbf21253 206 SUPERFAMILY SSF53955 84 201 2.97E-46 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily N288_07705 b2739bbdfb330f1e999d8dd0bbf21253 206 Pfam PF01464 Transglycosylase SLT domain 88 186 6.6E-29 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 N288_07705 b2739bbdfb330f1e999d8dd0bbf21253 206 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 106 134 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 N288_10770 eeeaa7c639cd8882aceebbbb2b21e598 316 PRINTS PR00069 Aldo-keto reductase signature 40 64 1.2E-5 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_10770 eeeaa7c639cd8882aceebbbb2b21e598 316 PRINTS PR00069 Aldo-keto reductase signature 246 270 1.2E-5 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_10770 eeeaa7c639cd8882aceebbbb2b21e598 316 PRINTS PR00069 Aldo-keto reductase signature 105 123 1.2E-5 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_10770 eeeaa7c639cd8882aceebbbb2b21e598 316 Gene3D G3DSA:3.20.20.100 1 316 4.4E-121 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily N288_10770 eeeaa7c639cd8882aceebbbb2b21e598 316 SUPERFAMILY SSF51430 1 313 9.43E-102 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily N288_10770 eeeaa7c639cd8882aceebbbb2b21e598 316 Pfam PF00248 Aldo/keto reductase family 15 313 9.3E-83 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain N288_20255 21904ff65dad9b6af70bd45bb3677e73 70 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 3 58 4.7E-7 T 12-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 N288_20255 21904ff65dad9b6af70bd45bb3677e73 70 TIGRFAM TIGR02901 QoxD: cytochrome aa3 quinol oxidase, subunit IV 2 69 3.2E-25 T 12-10-2018 IPR014250 Quinol oxidase subunit IV GO:0016021|GO:0016682|GO:0042773 N288_16755 45c22d3219cffeea203bb6d6f79b58c7 107 ProDom PD057197 SPORE COAT CAPSID D INNER D COTD SPORULATION 6 65 2.0E-5 T 12-10-2018 IPR020108 Spore coat protein CotD N288_16755 45c22d3219cffeea203bb6d6f79b58c7 107 Pfam PF11122 Inner spore coat protein D 11 96 7.3E-26 T 12-10-2018 IPR020108 Spore coat protein CotD N288_23335 5604032bfda7e24589b6d054d6fcf60f 234 Gene3D G3DSA:3.40.50.300 3 234 2.7E-76 T 12-10-2018 N288_23335 5604032bfda7e24589b6d054d6fcf60f 234 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 30 232 7.1E-70 T 12-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 N288_23335 5604032bfda7e24589b6d054d6fcf60f 234 Pfam PF13614 AAA domain 52 178 2.1E-15 T 12-10-2018 IPR025669 AAA domain N288_23335 5604032bfda7e24589b6d054d6fcf60f 234 SUPERFAMILY SSF52540 49 228 1.69E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_06080 83998197eba852b1d785b5db771cdf40 462 PRINTS PR00173 Glutamate-aspartate symporter signature 233 252 1.5E-14 T 12-10-2018 N288_06080 83998197eba852b1d785b5db771cdf40 462 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 1.5E-14 T 12-10-2018 N288_06080 83998197eba852b1d785b5db771cdf40 462 PRINTS PR00173 Glutamate-aspartate symporter signature 76 96 1.5E-14 T 12-10-2018 N288_06080 83998197eba852b1d785b5db771cdf40 462 PRINTS PR00173 Glutamate-aspartate symporter signature 106 131 1.5E-14 T 12-10-2018 N288_06080 83998197eba852b1d785b5db771cdf40 462 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 1.5E-14 T 12-10-2018 N288_06080 83998197eba852b1d785b5db771cdf40 462 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 1.1E-96 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 N288_06080 83998197eba852b1d785b5db771cdf40 462 Gene3D G3DSA:1.10.3860.10 3 460 2.9E-97 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 N288_06080 83998197eba852b1d785b5db771cdf40 462 SUPERFAMILY SSF118215 30 441 4.97E-91 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 N288_19000 24b468c3a426690f2f1fd58291b0a4ef 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 3.3E-41 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_19000 24b468c3a426690f2f1fd58291b0a4ef 102 SUPERFAMILY SSF141091 1 101 3.79E-39 T 12-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_19000 24b468c3a426690f2f1fd58291b0a4ef 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 12-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_19000 24b468c3a426690f2f1fd58291b0a4ef 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 27.518 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_19000 24b468c3a426690f2f1fd58291b0a4ef 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 6.1E-41 T 12-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_21810 664eaabc829296ea015d04d798e32307 92 Gene3D G3DSA:1.10.8.910 35 92 1.5E-9 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily N288_21810 664eaabc829296ea015d04d798e32307 92 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 6 88 1.8E-22 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 N288_06255 c45a415af9506918eaf84146e2f4c3ca 106 Pfam PF13028 Protein of unknown function (DUF3889) 12 104 4.8E-29 T 12-10-2018 IPR024987 Protein of unknown function DUF3889 N288_06255 c45a415af9506918eaf84146e2f4c3ca 106 Gene3D G3DSA:3.10.450.390 21 106 3.6E-12 T 12-10-2018 N288_15070 dd5e8bc627d0bb5f2c9489ac062295e9 726 Gene3D G3DSA:1.20.1220.12 583 725 6.5E-70 T 12-10-2018 N288_15070 dd5e8bc627d0bb5f2c9489ac062295e9 726 Gene3D G3DSA:2.170.170.11 134 263 1.7E-262 T 12-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 N288_15070 dd5e8bc627d0bb5f2c9489ac062295e9 726 Pfam PF01274 Malate synthase 18 696 2.2E-161 T 12-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 N288_15070 dd5e8bc627d0bb5f2c9489ac062295e9 726 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 5 721 0.0 T 12-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 N288_15070 dd5e8bc627d0bb5f2c9489ac062295e9 726 Hamap MF_00641 Malate synthase G [glcB]. 1 726 356.087 T 12-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 N288_15070 dd5e8bc627d0bb5f2c9489ac062295e9 726 Gene3D G3DSA:3.20.20.360 7 579 1.7E-262 T 12-10-2018 N288_15070 dd5e8bc627d0bb5f2c9489ac062295e9 726 SUPERFAMILY SSF51645 3 721 4.05E-285 T 12-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 N288_09150 7cb446a05d14892e2a1922deaf47c1bb 310 PIRSF PIRSF004486 1 310 3.9E-110 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 N288_09150 7cb446a05d14892e2a1922deaf47c1bb 310 Gene3D G3DSA:1.10.150.170 111 215 6.0E-106 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 N288_09150 7cb446a05d14892e2a1922deaf47c1bb 310 SUPERFAMILY SSF81799 113 214 1.57E-36 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 N288_09150 7cb446a05d14892e2a1922deaf47c1bb 310 Pfam PF01795 MraW methylase family 2 309 1.1E-135 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 N288_09150 7cb446a05d14892e2a1922deaf47c1bb 310 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 310 39.779 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 N288_09150 7cb446a05d14892e2a1922deaf47c1bb 310 SUPERFAMILY SSF53335 4 310 5.3E-47 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_09150 7cb446a05d14892e2a1922deaf47c1bb 310 Gene3D G3DSA:3.40.50.150 7 309 6.0E-106 T 12-10-2018 N288_09150 7cb446a05d14892e2a1922deaf47c1bb 310 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 309 9.8E-129 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 N288_16490 c20471efab8f6972af31c1a81559316e 562 Gene3D G3DSA:3.10.410.10 449 538 3.7E-35 T 12-10-2018 N288_16490 c20471efab8f6972af31c1a81559316e 562 Gene3D G3DSA:3.40.50.300 12 444 1.2E-198 T 12-10-2018 N288_16490 c20471efab8f6972af31c1a81559316e 562 Gene3D G3DSA:3.30.1510.10 135 253 1.2E-198 T 12-10-2018 N288_16490 c20471efab8f6972af31c1a81559316e 562 Pfam PF01268 Formate--tetrahydrofolate ligase 8 562 3.1E-264 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 N288_16490 c20471efab8f6972af31c1a81559316e 562 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 7 562 48.795 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 N288_16490 c20471efab8f6972af31c1a81559316e 562 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 334 345 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 N288_16490 c20471efab8f6972af31c1a81559316e 562 SUPERFAMILY SSF52540 10 560 3.87E-241 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_16490 c20471efab8f6972af31c1a81559316e 562 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 109 119 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 N288_06510 0c861f78c1b99aab2b926cbf67b1081e 642 Gene3D G3DSA:1.10.3810.10 14 210 2.4E-78 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_06510 0c861f78c1b99aab2b926cbf67b1081e 642 SUPERFAMILY SSF53955 2 209 7.03E-74 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily N288_06510 0c861f78c1b99aab2b926cbf67b1081e 642 SUPERFAMILY SSF56601 168 574 1.51E-115 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_06510 0c861f78c1b99aab2b926cbf67b1081e 642 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 27 564 5.1E-192 T 12-10-2018 N288_06510 0c861f78c1b99aab2b926cbf67b1081e 642 Pfam PF00905 Penicillin binding protein transpeptidase domain 283 559 9.2E-40 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 N288_06510 0c861f78c1b99aab2b926cbf67b1081e 642 Pfam PF00912 Transglycosylase 16 186 9.6E-65 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_06510 0c861f78c1b99aab2b926cbf67b1081e 642 Gene3D G3DSA:3.40.710.10 214 566 2.6E-133 T 12-10-2018 N288_03715 f97a597e1e3ae084a1c71b521fd522d0 329 SUPERFAMILY SSF53335 95 314 1.91E-30 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_03715 f97a597e1e3ae084a1c71b521fd522d0 329 Gene3D G3DSA:3.40.50.150 123 304 2.9E-26 T 12-10-2018 N288_03715 f97a597e1e3ae084a1c71b521fd522d0 329 Pfam PF13649 Methyltransferase domain 164 258 2.5E-15 T 12-10-2018 N288_08765 8393023fab4425ea2ef5f2e39c322bc7 256 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 248 4.0E-60 T 12-10-2018 N288_08765 8393023fab4425ea2ef5f2e39c322bc7 256 Gene3D G3DSA:3.40.50.1000 3 247 1.7E-81 T 12-10-2018 IPR023214 HAD superfamily N288_08765 8393023fab4425ea2ef5f2e39c322bc7 256 Gene3D G3DSA:3.30.1240.10 80 179 1.7E-81 T 12-10-2018 N288_08765 8393023fab4425ea2ef5f2e39c322bc7 256 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 223 4.5E-26 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 N288_08765 8393023fab4425ea2ef5f2e39c322bc7 256 SUPERFAMILY SSF56784 1 254 3.13E-68 T 12-10-2018 IPR036412 HAD-like superfamily N288_08765 8393023fab4425ea2ef5f2e39c322bc7 256 ProSitePatterns PS01229 Hypothetical cof family signature 2. 204 226 - T 12-10-2018 N288_08765 8393023fab4425ea2ef5f2e39c322bc7 256 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 249 7.8E-62 T 12-10-2018 IPR000150 Cof family GO:0016787 N288_03775 32c2635cd8331def1fcd7cbe6a22cf83 270 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 8 264 3.5E-63 T 12-10-2018 IPR017039 Virulence factor BrkB N288_03775 32c2635cd8331def1fcd7cbe6a22cf83 270 PIRSF PIRSF035875 5 270 1.2E-79 T 12-10-2018 IPR017039 Virulence factor BrkB N288_03775 32c2635cd8331def1fcd7cbe6a22cf83 270 Pfam PF03631 Virulence factor BrkB 14 265 2.1E-69 T 12-10-2018 IPR017039 Virulence factor BrkB N288_14655 ea9d8b8fe0449502bd5e905a9d3c85d8 294 Gene3D G3DSA:3.40.630.30 1 145 2.9E-22 T 12-10-2018 N288_14655 ea9d8b8fe0449502bd5e905a9d3c85d8 294 SUPERFAMILY SSF55729 1 291 1.03E-30 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_14655 ea9d8b8fe0449502bd5e905a9d3c85d8 294 Pfam PF00583 Acetyltransferase (GNAT) family 46 133 1.5E-10 T 12-10-2018 IPR000182 GNAT domain N288_19485 231d32e4289f561a0c37ad057eceaf8b 190 Pfam PF09335 SNARE associated Golgi protein 35 148 1.1E-10 T 12-10-2018 IPR032816 SNARE associated Golgi protein N288_07845 499178da1e8d4582029aa5a9dc92edb9 247 Pfam PF04029 2-phosphosulpholactate phosphatase 10 237 7.9E-60 T 12-10-2018 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 N288_07845 499178da1e8d4582029aa5a9dc92edb9 247 Gene3D G3DSA:3.90.1560.10 1 241 2.8E-66 T 12-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 N288_07845 499178da1e8d4582029aa5a9dc92edb9 247 SUPERFAMILY SSF142823 7 240 6.02E-53 T 12-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 N288_02735 4a7e81800b051a37ea48708e2cab85be 144 Gene3D G3DSA:1.20.1260.10 4 143 2.9E-31 T 12-10-2018 IPR012347 Ferritin-like N288_02735 4a7e81800b051a37ea48708e2cab85be 144 Pfam PF09537 Domain of unknown function (DUF2383) 6 103 9.8E-18 T 12-10-2018 IPR019052 Domain of unknown function DUF2383 N288_02735 4a7e81800b051a37ea48708e2cab85be 144 SUPERFAMILY SSF47240 3 143 5.77E-14 T 12-10-2018 IPR009078 Ferritin-like superfamily N288_13730 d7ee20c57081b0cdc82c63bc75078926 142 Pfam PF00583 Acetyltransferase (GNAT) family 24 131 5.3E-11 T 12-10-2018 IPR000182 GNAT domain N288_13730 d7ee20c57081b0cdc82c63bc75078926 142 SUPERFAMILY SSF55729 1 133 3.27E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_13730 d7ee20c57081b0cdc82c63bc75078926 142 Gene3D G3DSA:3.40.630.30 1 142 1.2E-31 T 12-10-2018 N288_19850 715c3c185cd9bf3fe19e02b2d8961534 141 Pfam PF02566 OsmC-like protein 33 130 7.9E-18 T 12-10-2018 IPR003718 OsmC/Ohr family N288_19850 715c3c185cd9bf3fe19e02b2d8961534 141 Gene3D G3DSA:2.20.25.10 1 36 1.4E-6 T 12-10-2018 N288_19850 715c3c185cd9bf3fe19e02b2d8961534 141 Gene3D G3DSA:3.30.300.20 39 133 2.5E-32 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta N288_19850 715c3c185cd9bf3fe19e02b2d8961534 141 SUPERFAMILY SSF82784 1 132 1.7E-40 T 12-10-2018 IPR036102 OsmC/Ohr superfamily N288_08200 07cd52cff365d7d03e4196397e0003a8 254 Gene3D G3DSA:1.10.3720.10 50 245 1.3E-22 T 12-10-2018 IPR035906 MetI-like superfamily N288_08200 07cd52cff365d7d03e4196397e0003a8 254 SUPERFAMILY SSF161098 52 232 1.57E-28 T 12-10-2018 IPR035906 MetI-like superfamily N288_08200 07cd52cff365d7d03e4196397e0003a8 254 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 237 2.2E-28 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_07620 217e5b2d5f437c692b9a66d84353896f 311 Gene3D G3DSA:1.10.3720.10 83 299 6.5E-22 T 12-10-2018 IPR035906 MetI-like superfamily N288_07620 217e5b2d5f437c692b9a66d84353896f 311 SUPERFAMILY SSF161098 88 291 1.8E-19 T 12-10-2018 IPR035906 MetI-like superfamily N288_07620 217e5b2d5f437c692b9a66d84353896f 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 5.0E-38 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_24885 7079def69fbf9757b629e9758b350d05 461 Pfam PF00367 phosphotransferase system, EIIB 8 40 8.5E-15 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 N288_24885 7079def69fbf9757b629e9758b350d05 461 Gene3D G3DSA:3.30.1360.60 2 76 1.5E-22 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 N288_24885 7079def69fbf9757b629e9758b350d05 461 Pfam PF02378 Phosphotransferase system, EIIC 109 383 2.8E-34 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 N288_24885 7079def69fbf9757b629e9758b350d05 461 SUPERFAMILY SSF55604 6 81 1.7E-21 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 N288_24885 7079def69fbf9757b629e9758b350d05 461 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 N288_00420 e6cc8153dfa2c8257162779b14d5b79e 330 SMART SM00220 27 262 6.2E-7 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 N288_00420 e6cc8153dfa2c8257162779b14d5b79e 330 Pfam PF00069 Protein kinase domain 27 239 1.4E-12 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 N288_00420 e6cc8153dfa2c8257162779b14d5b79e 330 Gene3D G3DSA:3.30.200.20 19 107 6.7E-27 T 12-10-2018 N288_00420 e6cc8153dfa2c8257162779b14d5b79e 330 SUPERFAMILY SSF56112 12 233 1.5E-24 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_00420 e6cc8153dfa2c8257162779b14d5b79e 330 Gene3D G3DSA:1.10.510.10 108 261 6.7E-27 T 12-10-2018 N288_00420 e6cc8153dfa2c8257162779b14d5b79e 330 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 33 54 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 N288_13405 96454fbe84390f6b167e77b692fc204c 58 Pfam PF09953 Uncharacterized protein conserved in bacteria (DUF2187) 2 58 3.7E-23 T 12-10-2018 IPR018690 Protein of unknown function DUF2187 N288_08740 dc353709ce288fddbf5de8b7ea778f7b 219 Gene3D G3DSA:3.30.70.1450 137 217 9.1E-27 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 N288_08740 dc353709ce288fddbf5de8b7ea778f7b 219 Pfam PF02254 TrkA-N domain 5 120 6.1E-31 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 N288_08740 dc353709ce288fddbf5de8b7ea778f7b 219 Pfam PF02080 TrkA-C domain 150 217 1.5E-13 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 N288_08740 dc353709ce288fddbf5de8b7ea778f7b 219 Gene3D G3DSA:3.40.50.720 1 136 1.2E-39 T 12-10-2018 N288_08740 dc353709ce288fddbf5de8b7ea778f7b 219 SUPERFAMILY SSF51735 4 134 1.82E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_08740 dc353709ce288fddbf5de8b7ea778f7b 219 SUPERFAMILY SSF116726 131 215 3.01E-20 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 N288_25975 a0020cc6fe79fb52cc85fcbe8ed1f44b 237 Pfam PF04474 Protein of unknown function (DUF554) 4 227 1.4E-73 T 12-10-2018 IPR007563 Protein of unknown function DUF554 N288_25355 22db9ade0606073febac62a3777a7ca3 256 SUPERFAMILY SSF52266 50 247 1.07E-28 T 12-10-2018 N288_25355 22db9ade0606073febac62a3777a7ca3 256 Gene3D G3DSA:3.40.50.1110 32 255 3.3E-31 T 12-10-2018 IPR036514 SGNH hydrolase superfamily N288_25355 22db9ade0606073febac62a3777a7ca3 256 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 56 240 2.9E-26 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain N288_09135 41a95320d6a9bd1a6cd6369f81cd7f09 544 Pfam PF10079 Bacillithiol biosynthesis BshC 1 540 1.2E-173 T 12-10-2018 IPR011199 Bacillithiol biosynthesis BshC N288_09135 41a95320d6a9bd1a6cd6369f81cd7f09 544 TIGRFAM TIGR03998 thiol_BshC: bacillithiol biosynthesis cysteine-adding enzyme BshC 11 542 1.5E-169 T 12-10-2018 IPR011199 Bacillithiol biosynthesis BshC N288_09135 41a95320d6a9bd1a6cd6369f81cd7f09 544 Hamap MF_01867 Putative cysteine ligase BshC [bshC]. 1 544 30.197 T 12-10-2018 IPR011199 Bacillithiol biosynthesis BshC N288_09135 41a95320d6a9bd1a6cd6369f81cd7f09 544 PIRSF PIRSF012535 1 544 3.8E-182 T 12-10-2018 IPR011199 Bacillithiol biosynthesis BshC N288_19945 a8bd9a876f7a0e476d2edf69d3dd289f 171 Pfam PF06103 Bacterial protein of unknown function (DUF948) 8 94 1.7E-26 T 12-10-2018 IPR009293 Uncharacterised protein family UPF0478 N288_20205 e9a1805076f7f77dd1a713814c035ed6 170 SUPERFAMILY SSF51161 2 168 1.15E-49 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily N288_20205 e9a1805076f7f77dd1a713814c035ed6 170 Gene3D G3DSA:2.160.10.10 1 170 8.2E-76 T 12-10-2018 N288_20205 e9a1805076f7f77dd1a713814c035ed6 170 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 121 1.3E-7 T 12-10-2018 IPR001451 Hexapeptide repeat N288_20205 e9a1805076f7f77dd1a713814c035ed6 170 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 44 4.1E-5 T 12-10-2018 IPR001451 Hexapeptide repeat N288_25685 1425f63eeb3a84929c488e60757bf50b 463 SUPERFAMILY SSF48452 393 459 5.55E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_25685 1425f63eeb3a84929c488e60757bf50b 463 Gene3D G3DSA:1.25.40.10 358 462 3.1E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_06175 83e2d32fe24f912cadaea04c5591e4c4 205 Pfam PF01865 Protein of unknown function DUF47 7 202 8.9E-25 T 12-10-2018 IPR018445 Putative phosphate transport regulator N288_06175 83e2d32fe24f912cadaea04c5591e4c4 205 Gene3D G3DSA:1.20.58.220 9 205 8.2E-57 T 12-10-2018 IPR038078 PhoU-like domain superfamily N288_06175 83e2d32fe24f912cadaea04c5591e4c4 205 SUPERFAMILY SSF109755 75 197 9.68E-6 T 12-10-2018 N288_16145 99cc52152aff3b7740507ea2112cb250 56 ProDom PD052277 YOZD 1 55 7.0E-16 T 12-10-2018 N288_16145 99cc52152aff3b7740507ea2112cb250 56 Pfam PF14162 YozD-like protein 2 55 2.1E-32 T 12-10-2018 IPR025545 YozD-like protein N288_12155 8a3f04ed1d2bb502a9a6fa6232fe6fc7 320 SUPERFAMILY SSF53098 6 181 5.76E-25 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily N288_12155 8a3f04ed1d2bb502a9a6fa6232fe6fc7 320 Pfam PF00929 Exonuclease 8 177 3.5E-14 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III N288_12155 8a3f04ed1d2bb502a9a6fa6232fe6fc7 320 Gene3D G3DSA:3.30.420.10 1 183 1.2E-33 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 N288_12155 8a3f04ed1d2bb502a9a6fa6232fe6fc7 320 SMART SM00479 6 186 8.9E-15 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III N288_25850 aeaea47b6435abcdb172b0c8816f5959 492 Gene3D G3DSA:2.70.70.10 362 491 9.6E-41 T 12-10-2018 IPR011055 Duplicated hybrid motif N288_25850 aeaea47b6435abcdb172b0c8816f5959 492 Gene3D G3DSA:2.20.230.10 283 361 1.5E-15 T 12-10-2018 N288_25850 aeaea47b6435abcdb172b0c8816f5959 492 Pfam PF01551 Peptidase family M23 391 486 1.0E-31 T 12-10-2018 IPR016047 Peptidase M23 N288_25850 aeaea47b6435abcdb172b0c8816f5959 492 SUPERFAMILY SSF54106 230 275 1.31E-6 T 12-10-2018 N288_25850 aeaea47b6435abcdb172b0c8816f5959 492 SUPERFAMILY SSF51261 286 489 2.82E-47 T 12-10-2018 IPR011055 Duplicated hybrid motif N288_25850 aeaea47b6435abcdb172b0c8816f5959 492 Pfam PF01476 LysM domain 232 275 2.2E-8 T 12-10-2018 IPR018392 LysM domain N288_25850 aeaea47b6435abcdb172b0c8816f5959 492 Gene3D G3DSA:3.10.350.10 229 276 1.9E-10 T 12-10-2018 IPR036779 LysM domain superfamily N288_25850 aeaea47b6435abcdb172b0c8816f5959 492 SMART SM00257 231 276 1.9E-9 T 12-10-2018 IPR018392 LysM domain N288_25850 aeaea47b6435abcdb172b0c8816f5959 492 SMART SM01208 284 362 4.6E-21 T 12-10-2018 IPR011098 G5 domain N288_25850 aeaea47b6435abcdb172b0c8816f5959 492 Pfam PF07501 G5 domain 287 361 6.8E-20 T 12-10-2018 IPR011098 G5 domain N288_12935 68eaa6741ef5bab9c1daea34eae45ccb 204 SMART SM00563 34 145 1.6E-26 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 N288_12935 68eaa6741ef5bab9c1daea34eae45ccb 204 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 22 142 1.7E-31 T 12-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 N288_12935 68eaa6741ef5bab9c1daea34eae45ccb 204 SUPERFAMILY SSF69593 12 183 4.84E-39 T 12-10-2018 N288_12935 68eaa6741ef5bab9c1daea34eae45ccb 204 Pfam PF01553 Acyltransferase 21 141 1.5E-23 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 N288_06180 1d9c7464dd7f2f467694408ffb2a172e 752 SUPERFAMILY SSF52540 192 744 2.05E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_06180 1d9c7464dd7f2f467694408ffb2a172e 752 Gene3D G3DSA:3.40.50.300 504 564 5.8E-5 T 12-10-2018 N288_06180 1d9c7464dd7f2f467694408ffb2a172e 752 Gene3D G3DSA:1.10.10.160 436 503 5.8E-5 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily N288_06180 1d9c7464dd7f2f467694408ffb2a172e 752 Pfam PF13538 UvrD-like helicase C-terminal domain 692 740 5.6E-7 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain N288_06180 1d9c7464dd7f2f467694408ffb2a172e 752 Pfam PF13245 AAA domain 202 561 1.5E-11 T 12-10-2018 N288_06180 1d9c7464dd7f2f467694408ffb2a172e 752 Gene3D G3DSA:3.40.50.300 585 752 6.1E-42 T 12-10-2018 N288_21645 92fe1fde8f9b673c85b39fbaf6189059 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.0E-30 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like N288_21645 92fe1fde8f9b673c85b39fbaf6189059 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.5E-20 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like N288_21645 92fe1fde8f9b673c85b39fbaf6189059 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.5E-20 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like N288_21645 92fe1fde8f9b673c85b39fbaf6189059 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.5E-20 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like N288_21645 92fe1fde8f9b673c85b39fbaf6189059 85 SUPERFAMILY SSF55594 3 83 3.93E-28 T 12-10-2018 IPR035895 HPr-like superfamily N288_21645 92fe1fde8f9b673c85b39fbaf6189059 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.8E-30 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like N288_21645 92fe1fde8f9b673c85b39fbaf6189059 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site N288_21645 92fe1fde8f9b673c85b39fbaf6189059 85 Gene3D G3DSA:3.30.1340.10 1 85 5.2E-36 T 12-10-2018 IPR035895 HPr-like superfamily N288_00120 0a333fb1f4f4d03e4d3e09488fd473a1 215 PIRSF PIRSF000705 3 209 1.2E-53 T 12-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 N288_00120 0a333fb1f4f4d03e4d3e09488fd473a1 215 SUPERFAMILY SSF52540 5 202 1.34E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_00120 0a333fb1f4f4d03e4d3e09488fd473a1 215 Gene3D G3DSA:3.40.50.300 6 203 4.1E-46 T 12-10-2018 N288_00120 0a333fb1f4f4d03e4d3e09488fd473a1 215 Pfam PF01712 Deoxynucleoside kinase 7 201 1.5E-46 T 12-10-2018 IPR031314 Deoxynucleoside kinase domain N288_00160 f93a8add27bfc0a2278da074b575b25d 89 TIGRFAM TIGR02862 spore_BofA: pro-sigmaK processing inhibitor BofA 7 88 1.4E-25 T 12-10-2018 IPR010001 SigmaK-factor processing regulatory BofA N288_00160 f93a8add27bfc0a2278da074b575b25d 89 Pfam PF07441 SigmaK-factor processing regulatory protein BofA 14 86 2.6E-20 T 12-10-2018 IPR010001 SigmaK-factor processing regulatory BofA N288_03005 0e304283531b0d1d6377f186c6d06c50 301 Pfam PF13732 Domain of unknown function (DUF4162) 211 299 4.4E-12 T 12-10-2018 IPR025302 Domain of unknown function DUF4162 N288_03005 0e304283531b0d1d6377f186c6d06c50 301 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_03005 0e304283531b0d1d6377f186c6d06c50 301 Gene3D G3DSA:3.40.50.300 1 231 2.1E-66 T 12-10-2018 N288_03005 0e304283531b0d1d6377f186c6d06c50 301 Pfam PF00005 ABC transporter 20 158 1.3E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_03005 0e304283531b0d1d6377f186c6d06c50 301 SUPERFAMILY SSF52540 3 220 4.31E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_03005 0e304283531b0d1d6377f186c6d06c50 301 SMART SM00382 28 206 2.3E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_07550 f696e38625d37d5c90ae5f4cd7f3c5b4 63 Pfam PF10815 ComZ 5 59 9.9E-33 T 12-10-2018 IPR024558 ComZ N288_07550 f696e38625d37d5c90ae5f4cd7f3c5b4 63 ProDom PD027277 REPRESSOR COMZ COMG OPERON TRANSCRIPTION POSSIBLE COMPETENCE PROTEIN-RELATED BH2888 REGULATION 4 58 2.0E-17 T 12-10-2018 IPR024558 ComZ N288_03075 5510c6368f0e3738c410fc3741bab089 430 Gene3D G3DSA:1.20.1530.20 24 420 8.3E-16 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily N288_03075 5510c6368f0e3738c410fc3741bab089 430 Pfam PF00999 Sodium/hydrogen exchanger family 31 417 2.7E-66 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 N288_02020 601f6cb0062899677e147e0b9e5a93c4 217 Pfam PF14285 Domain of unknown function (DUF4367) 95 216 1.0E-22 T 12-10-2018 IPR025377 Domain of unknown function DUF4367 N288_10640 58e7f08cc94750485df07b3905d61460 329 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 2 311 1.3E-55 T 12-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal N288_10640 58e7f08cc94750485df07b3905d61460 329 SUPERFAMILY SSF56235 2 316 5.4E-69 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_10640 58e7f08cc94750485df07b3905d61460 329 Gene3D G3DSA:3.60.60.10 2 328 1.7E-82 T 12-10-2018 N288_10645 cb7c4ba160c3b866eddfe403e9b43aca 448 Pfam PF03929 PepSY-associated TM region 16 387 1.4E-71 T 12-10-2018 IPR005625 PepSY-associated TM protein N288_11145 5506e21405be951f161df9ee8d3138da 159 ProSitePatterns PS00893 Nudix box signature. 44 65 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_11145 5506e21405be951f161df9ee8d3138da 159 SUPERFAMILY SSF55811 10 141 2.57E-26 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_11145 5506e21405be951f161df9ee8d3138da 159 PRINTS PR00502 NUDIX hydrolase family signature 53 68 9.0E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_11145 5506e21405be951f161df9ee8d3138da 159 PRINTS PR00502 NUDIX hydrolase family signature 39 53 9.0E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_11145 5506e21405be951f161df9ee8d3138da 159 Pfam PF00293 NUDIX domain 13 123 5.6E-20 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_11145 5506e21405be951f161df9ee8d3138da 159 Gene3D G3DSA:3.90.79.10 7 145 1.3E-26 T 12-10-2018 N288_03625 96a5fb7bdc3b2c03f3cd7f53fb686065 139 Gene3D G3DSA:1.10.10.10 1 137 7.5E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_03625 96a5fb7bdc3b2c03f3cd7f53fb686065 139 Pfam PF01047 MarR family 32 87 1.6E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_03625 96a5fb7bdc3b2c03f3cd7f53fb686065 139 SMART SM00347 24 123 3.0E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_03625 96a5fb7bdc3b2c03f3cd7f53fb686065 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 2.3E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_03625 96a5fb7bdc3b2c03f3cd7f53fb686065 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 2.3E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_03625 96a5fb7bdc3b2c03f3cd7f53fb686065 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 2.3E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_03625 96a5fb7bdc3b2c03f3cd7f53fb686065 139 SUPERFAMILY SSF46785 5 136 8.91E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_02280 30c8463b300e82e1f72c0480d7788ee7 281 Pfam PF04228 Putative neutral zinc metallopeptidase 1 276 1.5E-113 T 12-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative N288_21975 0a5c9d40a800d532771014c37bdd0672 190 Pfam PF02417 Chromate transporter 5 171 5.2E-39 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 N288_10070 96e458cdad19642369ec70f18f9b9e7c 365 SUPERFAMILY SSF53822 59 274 1.28E-11 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_10070 96e458cdad19642369ec70f18f9b9e7c 365 Gene3D G3DSA:3.40.50.2300 47 315 4.5E-106 T 12-10-2018 N288_10070 96e458cdad19642369ec70f18f9b9e7c 365 Gene3D G3DSA:3.40.50.2300 151 350 4.5E-106 T 12-10-2018 N288_10070 96e458cdad19642369ec70f18f9b9e7c 365 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 45 345 8.4E-81 T 12-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 N288_19440 b89ca8923869eae10f7ede5314d01093 86 Pfam PF05164 Cell division protein ZapA 10 82 3.0E-14 T 12-10-2018 IPR007838 Cell division protein ZapA-like N288_19440 b89ca8923869eae10f7ede5314d01093 86 SUPERFAMILY SSF102829 10 84 3.14E-17 T 12-10-2018 IPR036192 Cell division protein ZapA-like superfamily N288_02585 bced7cee3446f18f24d87c35598a5954 272 Pfam PF04321 RmlD substrate binding domain 3 236 6.5E-21 T 12-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 N288_02585 bced7cee3446f18f24d87c35598a5954 272 Gene3D G3DSA:3.90.25.10 158 235 3.0E-32 T 12-10-2018 N288_02585 bced7cee3446f18f24d87c35598a5954 272 SUPERFAMILY SSF51735 1 235 5.0E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_02585 bced7cee3446f18f24d87c35598a5954 272 Gene3D G3DSA:3.40.50.720 5 211 3.0E-32 T 12-10-2018 N288_12875 3b134375ff9dd17629b411e6d296876a 307 Pfam PF00892 EamA-like transporter family 9 140 4.3E-20 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_12875 3b134375ff9dd17629b411e6d296876a 307 Pfam PF00892 EamA-like transporter family 154 289 3.8E-26 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_12875 3b134375ff9dd17629b411e6d296876a 307 SUPERFAMILY SSF103481 41 141 6.15E-14 T 12-10-2018 N288_12875 3b134375ff9dd17629b411e6d296876a 307 SUPERFAMILY SSF103481 188 290 1.05E-14 T 12-10-2018 N288_03125 7ae49f0b22bd68034493ca6b343a1b83 218 Gene3D G3DSA:3.20.20.70 14 210 2.4E-56 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_03125 7ae49f0b22bd68034493ca6b343a1b83 218 SUPERFAMILY SSF51391 31 204 5.1E-47 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 N288_03125 7ae49f0b22bd68034493ca6b343a1b83 218 Pfam PF02581 Thiamine monophosphate synthase 29 190 5.8E-41 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 N288_16040 6e6e51a5ff5e691d0c2509d7a3f3c555 165 Gene3D G3DSA:3.40.630.30 1 164 2.7E-46 T 12-10-2018 N288_16040 6e6e51a5ff5e691d0c2509d7a3f3c555 165 Pfam PF00583 Acetyltransferase (GNAT) family 23 144 1.7E-15 T 12-10-2018 IPR000182 GNAT domain N288_16040 6e6e51a5ff5e691d0c2509d7a3f3c555 165 SUPERFAMILY SSF55729 1 160 1.49E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_03970 0384fc67e02d37256547562ba8b01c88 339 SUPERFAMILY SSF88697 81 219 2.4E-16 T 12-10-2018 IPR015947 PUA-like superfamily N288_03970 0384fc67e02d37256547562ba8b01c88 339 Pfam PF01844 HNH endonuclease 264 320 1.9E-9 T 12-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 N288_17155 76ef3c61566bddc13323ae49d28fda8a 285 TIGRFAM TIGR02869 spore_SleB: spore cortex-lytic enzyme 32 284 1.0E-98 T 12-10-2018 IPR014224 Spore cortex-lytic enzyme SleB GO:0003824|GO:0009847 N288_17155 76ef3c61566bddc13323ae49d28fda8a 285 Pfam PF07486 Cell Wall Hydrolase 186 284 1.4E-28 T 12-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 N288_17155 76ef3c61566bddc13323ae49d28fda8a 285 Gene3D G3DSA:1.10.101.10 28 110 6.7E-20 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 N288_17155 76ef3c61566bddc13323ae49d28fda8a 285 Gene3D G3DSA:1.10.10.2520 170 249 1.0E-32 T 12-10-2018 N288_17155 76ef3c61566bddc13323ae49d28fda8a 285 SUPERFAMILY SSF47090 35 99 1.31E-19 T 12-10-2018 IPR036365 PGBD-like superfamily N288_17155 76ef3c61566bddc13323ae49d28fda8a 285 Gene3D G3DSA:2.40.10.420 250 285 4.9E-22 T 12-10-2018 N288_17155 76ef3c61566bddc13323ae49d28fda8a 285 Pfam PF01471 Putative peptidoglycan binding domain 44 99 1.4E-16 T 12-10-2018 IPR002477 Peptidoglycan binding-like N288_11720 73aa8fbc4bee1b35cedbccaea2b6c08b 787 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 281 402 1.3E-18 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 N288_11720 73aa8fbc4bee1b35cedbccaea2b6c08b 787 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 556 685 7.0E-15 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 N288_11720 73aa8fbc4bee1b35cedbccaea2b6c08b 787 Gene3D G3DSA:1.10.8.60 419 496 2.8E-13 T 12-10-2018 N288_11720 73aa8fbc4bee1b35cedbccaea2b6c08b 787 Gene3D G3DSA:1.10.8.60 687 774 3.9E-10 T 12-10-2018 N288_11720 73aa8fbc4bee1b35cedbccaea2b6c08b 787 Gene3D G3DSA:3.40.50.300 216 416 2.7E-55 T 12-10-2018 N288_11720 73aa8fbc4bee1b35cedbccaea2b6c08b 787 Gene3D G3DSA:3.40.50.300 497 686 1.7E-52 T 12-10-2018 N288_11720 73aa8fbc4bee1b35cedbccaea2b6c08b 787 SMART SM00382 277 419 1.6E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_11720 73aa8fbc4bee1b35cedbccaea2b6c08b 787 SMART SM00382 551 689 8.2E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_11720 73aa8fbc4bee1b35cedbccaea2b6c08b 787 PRINTS PR00819 CbxX/CfqX superfamily signature 592 606 6.5E-48 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 N288_11720 73aa8fbc4bee1b35cedbccaea2b6c08b 787 PRINTS PR00819 CbxX/CfqX superfamily signature 554 569 6.5E-48 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 N288_11720 73aa8fbc4bee1b35cedbccaea2b6c08b 787 PRINTS PR00819 CbxX/CfqX superfamily signature 514 528 6.5E-48 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 N288_11720 73aa8fbc4bee1b35cedbccaea2b6c08b 787 PRINTS PR00819 CbxX/CfqX superfamily signature 657 674 6.5E-48 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 N288_11720 73aa8fbc4bee1b35cedbccaea2b6c08b 787 PRINTS PR00819 CbxX/CfqX superfamily signature 728 740 6.5E-48 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 N288_11720 73aa8fbc4bee1b35cedbccaea2b6c08b 787 PRINTS PR00819 CbxX/CfqX superfamily signature 674 693 6.5E-48 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 N288_11720 73aa8fbc4bee1b35cedbccaea2b6c08b 787 PRINTS PR00819 CbxX/CfqX superfamily signature 606 625 6.5E-48 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 N288_11720 73aa8fbc4bee1b35cedbccaea2b6c08b 787 PRINTS PR00819 CbxX/CfqX superfamily signature 636 648 6.5E-48 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 N288_11720 73aa8fbc4bee1b35cedbccaea2b6c08b 787 SUPERFAMILY SSF52540 507 749 5.05E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_11720 73aa8fbc4bee1b35cedbccaea2b6c08b 787 SUPERFAMILY SSF52540 239 476 1.27E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_09325 a18878d55a88aee0f07d2694341e3d16 354 Gene3D G3DSA:3.40.50.1370 169 313 9.2E-99 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 N288_09325 a18878d55a88aee0f07d2694341e3d16 354 PRINTS PR00101 Aspartate carbamoyltransferase signature 315 329 1.4E-30 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_09325 a18878d55a88aee0f07d2694341e3d16 354 PRINTS PR00101 Aspartate carbamoyltransferase signature 113 122 1.4E-30 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_09325 a18878d55a88aee0f07d2694341e3d16 354 PRINTS PR00101 Aspartate carbamoyltransferase signature 75 97 1.4E-30 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_09325 a18878d55a88aee0f07d2694341e3d16 354 PRINTS PR00101 Aspartate carbamoyltransferase signature 168 185 1.4E-30 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_09325 a18878d55a88aee0f07d2694341e3d16 354 PRINTS PR00101 Aspartate carbamoyltransferase signature 291 296 1.4E-30 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_09325 a18878d55a88aee0f07d2694341e3d16 354 PRINTS PR00101 Aspartate carbamoyltransferase signature 250 259 1.4E-30 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_09325 a18878d55a88aee0f07d2694341e3d16 354 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 44 333 4.9E-95 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_09325 a18878d55a88aee0f07d2694341e3d16 354 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 44 181 1.1E-38 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 N288_09325 a18878d55a88aee0f07d2694341e3d16 354 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 85 104 1.7E-22 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 N288_09325 a18878d55a88aee0f07d2694341e3d16 354 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 1.7E-22 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 N288_09325 a18878d55a88aee0f07d2694341e3d16 354 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 169 180 1.7E-22 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 N288_09325 a18878d55a88aee0f07d2694341e3d16 354 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 287 296 1.7E-22 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 N288_09325 a18878d55a88aee0f07d2694341e3d16 354 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 85 92 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 N288_09325 a18878d55a88aee0f07d2694341e3d16 354 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 43 336 39.294 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_09325 a18878d55a88aee0f07d2694341e3d16 354 SUPERFAMILY SSF53671 42 335 4.98E-93 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 N288_09325 a18878d55a88aee0f07d2694341e3d16 354 Gene3D G3DSA:3.40.50.1370 48 330 9.2E-99 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 N288_09325 a18878d55a88aee0f07d2694341e3d16 354 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 189 330 5.2E-24 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 N288_05610 90d79c5fd7c157fd1921e1eabf7cb90e 300 SUPERFAMILY SSF51735 1 299 2.0E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_05610 90d79c5fd7c157fd1921e1eabf7cb90e 300 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 128 3.1E-16 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 N288_05610 90d79c5fd7c157fd1921e1eabf7cb90e 300 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 1.2E-111 T 12-10-2018 IPR010099 Epimerase family protein SDR39U1 N288_05610 90d79c5fd7c157fd1921e1eabf7cb90e 300 Gene3D G3DSA:3.40.50.720 2 300 2.7E-80 T 12-10-2018 N288_05610 90d79c5fd7c157fd1921e1eabf7cb90e 300 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 2.4E-23 T 12-10-2018 IPR013549 Domain of unknown function DUF1731 N288_13070 212c8e7e6054c775e6222248e96d07f1 277 Pfam PF08543 Phosphomethylpyrimidine kinase 13 259 1.7E-98 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 N288_13070 212c8e7e6054c775e6222248e96d07f1 277 SUPERFAMILY SSF53613 1 263 3.59E-85 T 12-10-2018 IPR029056 Ribokinase-like N288_13070 212c8e7e6054c775e6222248e96d07f1 277 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 261 3.2E-104 T 12-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 N288_13070 212c8e7e6054c775e6222248e96d07f1 277 Gene3D G3DSA:3.40.1190.20 1 273 6.6E-106 T 12-10-2018 IPR029056 Ribokinase-like N288_04355 95b71ba6f702f7046a764101042565d3 342 Gene3D G3DSA:3.40.50.12260 214 317 7.6E-83 T 12-10-2018 N288_04355 95b71ba6f702f7046a764101042565d3 342 SUPERFAMILY SSF53807 73 328 1.37E-58 T 12-10-2018 N288_04355 95b71ba6f702f7046a764101042565d3 342 Gene3D G3DSA:3.40.50.1980 76 330 7.6E-83 T 12-10-2018 N288_04355 95b71ba6f702f7046a764101042565d3 342 Pfam PF01497 Periplasmic binding protein 84 316 2.1E-30 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain N288_16830 07382520ee838669efaa56d647881a0a 203 TIGRFAM TIGR00648 recU: recombination protein U 31 198 3.5E-79 T 12-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 N288_16830 07382520ee838669efaa56d647881a0a 203 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 203 97.007 T 12-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 N288_16830 07382520ee838669efaa56d647881a0a 203 Pfam PF03838 Recombination protein U 32 197 3.2E-67 T 12-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 N288_16830 07382520ee838669efaa56d647881a0a 203 SUPERFAMILY SSF52980 34 200 2.17E-68 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 N288_16830 07382520ee838669efaa56d647881a0a 203 PIRSF PIRSF037785 23 203 3.0E-79 T 12-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 N288_16830 07382520ee838669efaa56d647881a0a 203 Gene3D G3DSA:3.40.1350.10 35 203 1.3E-67 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 N288_00660 c4182cabf90bfdad35655458b99fa098 219 TIGRFAM TIGR02859 spore_sigH: RNA polymerase sigma-H factor 17 213 3.3E-114 T 12-10-2018 IPR014218 RNA polymerase sigma-H type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_00660 c4182cabf90bfdad35655458b99fa098 219 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 63 76 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_00660 c4182cabf90bfdad35655458b99fa098 219 Pfam PF08281 Sigma-70, region 4 164 208 1.1E-9 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_00660 c4182cabf90bfdad35655458b99fa098 219 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 34 212 1.6E-27 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_00660 c4182cabf90bfdad35655458b99fa098 219 Pfam PF04542 Sigma-70 region 2 39 108 3.4E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_00660 c4182cabf90bfdad35655458b99fa098 219 SUPERFAMILY SSF88946 20 108 1.96E-23 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_00660 c4182cabf90bfdad35655458b99fa098 219 SUPERFAMILY SSF88659 126 213 4.58E-11 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_00660 c4182cabf90bfdad35655458b99fa098 219 SMART SM00421 163 217 0.0056 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_00660 c4182cabf90bfdad35655458b99fa098 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 180 207 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_00660 c4182cabf90bfdad35655458b99fa098 219 PIRSF PIRSF002939 5 219 2.0E-111 T 12-10-2018 IPR016371 RNA polymerase sigma-H factor GO:0003677|GO:0006351|GO:0016987 N288_00910 fbdb82daaef3007e6649c994d27fcebf 245 Gene3D G3DSA:3.30.70.580 1 106 1.5E-36 T 12-10-2018 N288_00910 fbdb82daaef3007e6649c994d27fcebf 245 Pfam PF01416 tRNA pseudouridine synthase 9 105 1.6E-8 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_00910 fbdb82daaef3007e6649c994d27fcebf 245 Pfam PF01416 tRNA pseudouridine synthase 144 245 1.0E-27 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_00910 fbdb82daaef3007e6649c994d27fcebf 245 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 36.811 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_00910 fbdb82daaef3007e6649c994d27fcebf 245 SUPERFAMILY SSF55120 1 245 1.73E-84 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_00910 fbdb82daaef3007e6649c994d27fcebf 245 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 240 1.8E-67 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_00910 fbdb82daaef3007e6649c994d27fcebf 245 Gene3D G3DSA:3.30.70.660 107 243 1.5E-50 T 12-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 N288_00910 fbdb82daaef3007e6649c994d27fcebf 245 PIRSF PIRSF001430 1 245 6.0E-83 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_05330 ddef9bfd9231523bdd22f1a05cf890c3 354 Gene3D G3DSA:3.60.60.10 87 324 3.2E-30 T 12-10-2018 N288_05330 ddef9bfd9231523bdd22f1a05cf890c3 354 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 105 310 4.5E-62 T 12-10-2018 IPR005079 Peptidase C45 N288_05330 ddef9bfd9231523bdd22f1a05cf890c3 354 SUPERFAMILY SSF56235 107 228 2.62E-10 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal N288_17420 5a5f1dbc6779cc683c95da673270f1f1 206 Gene3D G3DSA:2.60.480.10 1 96 4.3E-11 T 12-10-2018 IPR038548 Stage V sporulation protein AA, N-terminal domain superfamily N288_17420 5a5f1dbc6779cc683c95da673270f1f1 206 Pfam PF12164 Stage V sporulation protein AA 3 90 5.1E-19 T 12-10-2018 IPR021997 Stage V sporulation protein AA N288_10555 27810b3168a826b0819121c957ee727e 247 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 2 238 39.239 T 12-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 N288_10555 27810b3168a826b0819121c957ee727e 247 Pfam PF04794 YdjC-like protein 3 228 5.3E-63 T 12-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like N288_10555 27810b3168a826b0819121c957ee727e 247 Gene3D G3DSA:3.20.20.370 1 243 4.4E-84 T 12-10-2018 N288_10555 27810b3168a826b0819121c957ee727e 247 SUPERFAMILY SSF88713 1 241 1.82E-77 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 N288_22930 fca89a5f1d040a81d8a82601dee95d1a 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 4.0E-30 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 N288_22930 fca89a5f1d040a81d8a82601dee95d1a 320 Gene3D G3DSA:3.40.50.720 4 312 1.8E-123 T 12-10-2018 N288_22930 fca89a5f1d040a81d8a82601dee95d1a 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 227 243 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site N288_22930 fca89a5f1d040a81d8a82601dee95d1a 320 SUPERFAMILY SSF52283 2 136 6.8E-34 T 12-10-2018 N288_22930 fca89a5f1d040a81d8a82601dee95d1a 320 Gene3D G3DSA:3.40.50.720 99 288 1.8E-123 T 12-10-2018 N288_22930 fca89a5f1d040a81d8a82601dee95d1a 320 SUPERFAMILY SSF51735 105 289 5.36E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_22930 fca89a5f1d040a81d8a82601dee95d1a 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 288 8.8E-63 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 N288_05630 47e9db55861d54fa5c105eaa8134b510 52 Pfam PF14139 YpzG-like protein 1 51 1.5E-24 T 12-10-2018 IPR025413 YpzG-like protein N288_14735 9ac24911b1c71410190c7d33bb8a335c 166 Gene3D G3DSA:3.40.630.30 1 166 2.7E-39 T 12-10-2018 N288_14735 9ac24911b1c71410190c7d33bb8a335c 166 Pfam PF13420 Acetyltransferase (GNAT) domain 3 159 2.3E-14 T 12-10-2018 N288_14735 9ac24911b1c71410190c7d33bb8a335c 166 SUPERFAMILY SSF55729 1 164 4.63E-33 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_17010 91a950999b5fa842cd4a38be5be14f01 366 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 359 60.365 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 N288_17010 91a950999b5fa842cd4a38be5be14f01 366 Gene3D G3DSA:3.40.640.10 43 267 5.3E-113 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_17010 91a950999b5fa842cd4a38be5be14f01 366 Gene3D G3DSA:3.90.1150.10 21 348 5.3E-113 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_17010 91a950999b5fa842cd4a38be5be14f01 366 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 5 357 1.8E-110 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 N288_17010 91a950999b5fa842cd4a38be5be14f01 366 SUPERFAMILY SSF53383 1 361 4.26E-85 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_17010 91a950999b5fa842cd4a38be5be14f01 366 Pfam PF00155 Aminotransferase class I and II 30 353 1.5E-60 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 N288_07430 e47fd44b6b498b2467a86c7a3d87a455 252 Gene3D G3DSA:2.60.40.2360 25 144 8.4E-26 T 12-10-2018 IPR038144 Intracellular proteinase inhibitor N288_07430 e47fd44b6b498b2467a86c7a3d87a455 252 Pfam PF12690 Intracellular proteinase inhibitor 42 118 3.8E-20 T 12-10-2018 IPR020481 Intracellular proteinase inhibitor BsuPI N288_07430 e47fd44b6b498b2467a86c7a3d87a455 252 ProDom PD076312 INHIBITOR INTRACELLULAR PROTEINASE PRECURSOR SIGNAL DOMAIN SLH S-LAYER PROTEASE BSUPI 30 107 5.0E-10 T 12-10-2018 IPR020481 Intracellular proteinase inhibitor BsuPI N288_18550 26c9275535622289599b9dc594ae4d6d 216 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 151 214 3.2E-24 T 12-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain N288_18550 26c9275535622289599b9dc594ae4d6d 216 Pfam PF12836 Helix-hairpin-helix motif 154 213 8.0E-24 T 12-10-2018 N288_18550 26c9275535622289599b9dc594ae4d6d 216 SMART SM00278 193 212 0.0031 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 N288_18550 26c9275535622289599b9dc594ae4d6d 216 SMART SM00278 163 182 9.3E-4 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 N288_18550 26c9275535622289599b9dc594ae4d6d 216 Pfam PF10531 SLBB domain 74 125 3.0E-14 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_18550 26c9275535622289599b9dc594ae4d6d 216 SUPERFAMILY SSF142984 75 109 3.4E-5 T 12-10-2018 N288_18550 26c9275535622289599b9dc594ae4d6d 216 SUPERFAMILY SSF47781 131 213 3.56E-32 T 12-10-2018 IPR010994 RuvA domain 2-like N288_18550 26c9275535622289599b9dc594ae4d6d 216 Gene3D G3DSA:3.10.560.10 62 139 4.0E-10 T 12-10-2018 N288_18550 26c9275535622289599b9dc594ae4d6d 216 Gene3D G3DSA:1.10.150.320 140 214 1.1E-24 T 12-10-2018 N288_02800 1f9d9f4671f2dbcb1d3019a21d08ef60 398 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 105 378 2.7E-28 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 N288_02800 1f9d9f4671f2dbcb1d3019a21d08ef60 398 Gene3D G3DSA:3.40.50.150 182 397 2.5E-54 T 12-10-2018 N288_02800 1f9d9f4671f2dbcb1d3019a21d08ef60 398 SUPERFAMILY SSF88697 5 74 5.22E-18 T 12-10-2018 IPR015947 PUA-like superfamily N288_02800 1f9d9f4671f2dbcb1d3019a21d08ef60 398 Gene3D G3DSA:3.30.750.80 75 179 1.5E-36 T 12-10-2018 N288_02800 1f9d9f4671f2dbcb1d3019a21d08ef60 398 Gene3D G3DSA:2.30.130.10 5 73 1.2E-19 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 N288_02800 1f9d9f4671f2dbcb1d3019a21d08ef60 398 SUPERFAMILY SSF53335 81 393 1.71E-61 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_22425 83736917671b8518993d3cc7d045a6bb 751 PRINTS PR00834 HtrA/DegQ protease family signature 249 261 6.6E-16 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_22425 83736917671b8518993d3cc7d045a6bb 751 PRINTS PR00834 HtrA/DegQ protease family signature 368 385 6.6E-16 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_22425 83736917671b8518993d3cc7d045a6bb 751 PRINTS PR00834 HtrA/DegQ protease family signature 346 363 6.6E-16 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_22425 83736917671b8518993d3cc7d045a6bb 751 PRINTS PR00834 HtrA/DegQ protease family signature 312 336 6.6E-16 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_22425 83736917671b8518993d3cc7d045a6bb 751 Gene3D G3DSA:2.40.10.120 208 406 1.5E-43 T 12-10-2018 N288_22425 83736917671b8518993d3cc7d045a6bb 751 SUPERFAMILY SSF50494 216 401 5.61E-39 T 12-10-2018 IPR009003 Peptidase S1, PA clan N288_22425 83736917671b8518993d3cc7d045a6bb 751 SUPERFAMILY SSF50969 471 730 3.3E-14 T 12-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like N288_22425 83736917671b8518993d3cc7d045a6bb 751 Pfam PF13365 Trypsin-like peptidase domain 241 375 5.9E-24 T 12-10-2018 N288_22425 83736917671b8518993d3cc7d045a6bb 751 Pfam PF00395 S-layer homology domain 148 191 8.1E-12 T 12-10-2018 IPR001119 S-layer homology domain N288_22425 83736917671b8518993d3cc7d045a6bb 751 Pfam PF00395 S-layer homology domain 38 70 1.4E-8 T 12-10-2018 IPR001119 S-layer homology domain N288_22425 83736917671b8518993d3cc7d045a6bb 751 Pfam PF00395 S-layer homology domain 89 132 2.9E-11 T 12-10-2018 IPR001119 S-layer homology domain N288_22425 83736917671b8518993d3cc7d045a6bb 751 Gene3D G3DSA:2.130.10.10 494 744 5.3E-7 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 N288_06195 e7a51440eb9cc3b5dfe0f645d3f5d748 285 Pfam PF00849 RNA pseudouridylate synthase 73 225 1.4E-34 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_06195 e7a51440eb9cc3b5dfe0f645d3f5d748 285 SUPERFAMILY SSF55120 59 272 2.56E-65 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_06195 e7a51440eb9cc3b5dfe0f645d3f5d748 285 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 3 271 3.4E-67 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_06195 e7a51440eb9cc3b5dfe0f645d3f5d748 285 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 116 130 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_06195 e7a51440eb9cc3b5dfe0f645d3f5d748 285 Gene3D G3DSA:3.30.2350.10 56 271 1.7E-65 T 12-10-2018 N288_02040 a74b0ee95a841da28cf5a5c4dcbffe27 511 PIRSF PIRSF026631 1 510 1.8E-92 T 12-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 N288_02040 a74b0ee95a841da28cf5a5c4dcbffe27 511 Pfam PF03703 Bacterial PH domain 420 499 6.8E-11 T 12-10-2018 IPR005182 Domain of unknown function DUF304 N288_02040 a74b0ee95a841da28cf5a5c4dcbffe27 511 Pfam PF03703 Bacterial PH domain 268 347 2.0E-11 T 12-10-2018 IPR005182 Domain of unknown function DUF304 N288_02040 a74b0ee95a841da28cf5a5c4dcbffe27 511 Pfam PF03703 Bacterial PH domain 64 143 2.8E-17 T 12-10-2018 IPR005182 Domain of unknown function DUF304 N288_02635 f75c20eb56b7fc00edf689948f24f626 469 Gene3D G3DSA:3.30.70.360 186 383 5.7E-155 T 12-10-2018 N288_02635 f75c20eb56b7fc00edf689948f24f626 469 SUPERFAMILY SSF53187 2 468 1.31E-67 T 12-10-2018 N288_02635 f75c20eb56b7fc00edf689948f24f626 469 Gene3D G3DSA:3.30.70.360 208 295 5.7E-155 T 12-10-2018 N288_02635 f75c20eb56b7fc00edf689948f24f626 469 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 12 464 1.1E-148 T 12-10-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 N288_02635 f75c20eb56b7fc00edf689948f24f626 469 SUPERFAMILY SSF55031 204 380 2.26E-49 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_02635 f75c20eb56b7fc00edf689948f24f626 469 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 116 155 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 N288_02635 f75c20eb56b7fc00edf689948f24f626 469 Pfam PF01546 Peptidase family M20/M25/M40 86 465 6.7E-41 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_02635 f75c20eb56b7fc00edf689948f24f626 469 Gene3D G3DSA:3.40.630.10 14 467 5.7E-155 T 12-10-2018 N288_15085 bd434c1b68ee6b1350668e6bbe69b11d 150 Pfam PF01230 HIT domain 36 107 1.8E-7 T 12-10-2018 IPR001310 Histidine triad (HIT) protein N288_15085 bd434c1b68ee6b1350668e6bbe69b11d 150 SUPERFAMILY SSF54197 1 146 1.39E-30 T 12-10-2018 IPR036265 HIT-like superfamily N288_15085 bd434c1b68ee6b1350668e6bbe69b11d 150 Gene3D G3DSA:3.30.428.10 1 149 1.1E-30 T 12-10-2018 IPR036265 HIT-like superfamily N288_15460 a833f40ae30ba26e3ffe21a1d024eb49 149 Pfam PF02566 OsmC-like protein 39 141 4.7E-16 T 12-10-2018 IPR003718 OsmC/Ohr family N288_15460 a833f40ae30ba26e3ffe21a1d024eb49 149 TIGRFAM TIGR03563 perox_SACOL1771: peroxiredoxin, SACOL1771 subfamily 4 141 5.1E-64 T 12-10-2018 IPR019905 Peroxiredoxin OsmC-like protein, Firmicutes N288_15460 a833f40ae30ba26e3ffe21a1d024eb49 149 Gene3D G3DSA:3.30.300.20 6 144 1.8E-29 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta N288_15460 a833f40ae30ba26e3ffe21a1d024eb49 149 SUPERFAMILY SSF82784 3 140 6.41E-31 T 12-10-2018 IPR036102 OsmC/Ohr superfamily N288_15650 317ea68b5ff3550fe07b7d568697da68 482 SUPERFAMILY SSF58104 216 480 7.72E-57 T 12-10-2018 N288_15650 317ea68b5ff3550fe07b7d568697da68 482 Gene3D G3DSA:1.10.287.950 170 482 1.0E-56 T 12-10-2018 N288_15650 317ea68b5ff3550fe07b7d568697da68 482 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 281 407 3.1E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_15650 317ea68b5ff3550fe07b7d568697da68 482 SMART SM00283 210 471 1.4E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_21090 b429eb9fa48a516ea442cf3dfd486c6c 368 Pfam PF01966 HD domain 136 257 3.6E-17 T 12-10-2018 IPR006674 HD domain N288_21090 b429eb9fa48a516ea442cf3dfd486c6c 368 SMART SM00471 131 267 1.3E-9 T 12-10-2018 IPR003607 HD/PDEase domain N288_21090 b429eb9fa48a516ea442cf3dfd486c6c 368 SUPERFAMILY SSF109604 123 295 4.45E-38 T 12-10-2018 N288_21090 b429eb9fa48a516ea442cf3dfd486c6c 368 Gene3D G3DSA:1.10.3210.10 3 299 3.6E-76 T 12-10-2018 N288_21090 b429eb9fa48a516ea442cf3dfd486c6c 368 TIGRFAM TIGR00277 HDIG: HDIG domain 132 212 9.6E-8 T 12-10-2018 IPR006675 HDIG domain N288_11410 7484b333b1f56797c2b5447db741210f 286 Pfam PF00535 Glycosyl transferase family 2 7 132 3.6E-21 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 N288_11410 7484b333b1f56797c2b5447db741210f 286 Gene3D G3DSA:3.90.550.10 1 234 2.7E-41 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_11410 7484b333b1f56797c2b5447db741210f 286 SUPERFAMILY SSF53448 4 224 1.69E-40 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_03335 f025ca54d692e4a9661c47b023985540 189 SUPERFAMILY SSF47240 1 186 1.34E-69 T 12-10-2018 IPR009078 Ferritin-like superfamily N288_03335 f025ca54d692e4a9661c47b023985540 189 Pfam PF05067 Manganese containing catalase 1 184 8.9E-80 T 12-10-2018 IPR007760 Manganese catalase N288_03335 f025ca54d692e4a9661c47b023985540 189 Gene3D G3DSA:1.20.1260.10 1 184 6.3E-65 T 12-10-2018 IPR012347 Ferritin-like N288_00445 5efe84bb923b6a2e9467b75ce66ea06a 292 SUPERFAMILY SSF64397 2 241 5.49E-79 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 N288_00445 5efe84bb923b6a2e9467b75ce66ea06a 292 Pfam PF01430 Hsp33 protein 3 279 9.2E-92 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 N288_00445 5efe84bb923b6a2e9467b75ce66ea06a 292 Gene3D G3DSA:3.90.1280.10 237 291 1.0E-22 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 N288_00445 5efe84bb923b6a2e9467b75ce66ea06a 292 SUPERFAMILY SSF118352 231 289 7.59E-21 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 N288_00445 5efe84bb923b6a2e9467b75ce66ea06a 292 Gene3D G3DSA:3.55.30.10 2 236 1.5E-96 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 N288_00445 5efe84bb923b6a2e9467b75ce66ea06a 292 Hamap MF_00117 33 kDa chaperonin [hslO]. 2 291 41.693 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 N288_00445 5efe84bb923b6a2e9467b75ce66ea06a 292 PIRSF PIRSF005261 1 292 5.6E-79 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 N288_18065 b15ad7c34e8ae43e68164c19387ff5bb 233 Pfam PF12840 Helix-turn-helix domain 7 60 1.6E-8 T 12-10-2018 N288_18065 b15ad7c34e8ae43e68164c19387ff5bb 233 Gene3D G3DSA:1.10.10.10 2 92 8.6E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_18065 b15ad7c34e8ae43e68164c19387ff5bb 233 SMART SM00418 6 88 0.0048 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_18065 b15ad7c34e8ae43e68164c19387ff5bb 233 SUPERFAMILY SSF46785 1 204 2.04E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_02290 0d36b28af333fc7665e4d0e7d4aeb629 125 Pfam PF02656 Domain of unknown function (DUF202) 15 84 5.8E-18 T 12-10-2018 IPR003807 Domain of unknown function DUF202 N288_18375 152c0b3d7c7ca58313cf9304eeae75ff 298 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 1 287 4.7E-166 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 N288_18375 152c0b3d7c7ca58313cf9304eeae75ff 298 Gene3D G3DSA:3.30.930.10 1 204 4.0E-108 T 12-10-2018 N288_18375 152c0b3d7c7ca58313cf9304eeae75ff 298 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 280 2.3E-147 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 N288_18375 152c0b3d7c7ca58313cf9304eeae75ff 298 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 281 58.067 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 N288_18375 152c0b3d7c7ca58313cf9304eeae75ff 298 SUPERFAMILY SSF55681 1 280 1.57E-132 T 12-10-2018 N288_18375 152c0b3d7c7ca58313cf9304eeae75ff 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 1.9E-67 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 N288_18375 152c0b3d7c7ca58313cf9304eeae75ff 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 1.9E-67 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 N288_18375 152c0b3d7c7ca58313cf9304eeae75ff 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 1.9E-67 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 N288_18375 152c0b3d7c7ca58313cf9304eeae75ff 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 1.9E-67 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 N288_18375 152c0b3d7c7ca58313cf9304eeae75ff 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 1.9E-67 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 N288_18375 152c0b3d7c7ca58313cf9304eeae75ff 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 241 257 1.9E-67 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 N288_18375 152c0b3d7c7ca58313cf9304eeae75ff 298 Gene3D G3DSA:1.20.58.180 205 285 2.1E-35 T 12-10-2018 N288_22060 1c4aa6a6535d5a7c2bd2c8ba7e878c6b 88 SUPERFAMILY SSF101498 1 85 7.45E-20 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily N288_22060 1c4aa6a6535d5a7c2bd2c8ba7e878c6b 88 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 85 3.3E-17 T 12-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 N288_22060 1c4aa6a6535d5a7c2bd2c8ba7e878c6b 88 Pfam PF04316 Anti-sigma-28 factor, FlgM 33 83 5.3E-15 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal N288_25735 3fe6b7681a9e53ec2f13251d0633170c 177 SUPERFAMILY SSF110391 5 177 1.57E-61 T 12-10-2018 IPR035928 GlpP-like superfamily N288_25735 3fe6b7681a9e53ec2f13251d0633170c 177 PIRSF PIRSF016897 2 177 1.9E-65 T 12-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 N288_25735 3fe6b7681a9e53ec2f13251d0633170c 177 Gene3D G3DSA:3.20.20.400 2 177 7.7E-71 T 12-10-2018 IPR035928 GlpP-like superfamily N288_25735 3fe6b7681a9e53ec2f13251d0633170c 177 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 5 177 3.7E-66 T 12-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 N288_16495 27aae8e00f694ea4f4c52d3e4593a10f 301 PIRSF PIRSF000450 1 301 1.7E-144 T 12-10-2018 IPR033752 MetA family N288_16495 27aae8e00f694ea4f4c52d3e4593a10f 301 Gene3D G3DSA:3.40.50.880 1 301 1.3E-125 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_16495 27aae8e00f694ea4f4c52d3e4593a10f 301 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 42.604 T 12-10-2018 IPR033752 MetA family N288_16495 27aae8e00f694ea4f4c52d3e4593a10f 301 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 300 1.7E-132 T 12-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 N288_16495 27aae8e00f694ea4f4c52d3e4593a10f 301 SUPERFAMILY SSF52317 17 297 7.94E-103 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_16495 27aae8e00f694ea4f4c52d3e4593a10f 301 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 6.0E-97 T 12-10-2018 N288_16495 27aae8e00f694ea4f4c52d3e4593a10f 301 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.4E-137 T 12-10-2018 IPR033752 MetA family N288_11535 25a026bb3f308cad378afc988cf89750 371 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 177 325 3.7E-18 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_11535 25a026bb3f308cad378afc988cf89750 371 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 23 152 2.0E-6 T 12-10-2018 N288_11535 25a026bb3f308cad378afc988cf89750 371 SUPERFAMILY SSF54593 13 358 5.23E-92 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_11535 25a026bb3f308cad378afc988cf89750 371 Gene3D G3DSA:3.10.180.10 173 371 1.1E-82 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_11535 25a026bb3f308cad378afc988cf89750 371 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 20 371 1.5E-142 T 12-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 N288_11535 25a026bb3f308cad378afc988cf89750 371 Gene3D G3DSA:3.10.180.10 4 171 6.8E-54 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_11535 25a026bb3f308cad378afc988cf89750 371 PIRSF PIRSF009283 7 371 4.1E-138 T 12-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 N288_05480 f029118e2bf5902cb78afe92b43b76eb 258 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 12 250 3.4E-89 T 12-10-2018 IPR022493 Integral membrane YkoY N288_05480 f029118e2bf5902cb78afe92b43b76eb 258 Pfam PF03741 Integral membrane protein TerC family 16 207 3.8E-51 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 N288_10125 79b128af0d0bece324ee62d9266425c7 192 PIRSF PIRSF000847 1 191 9.4E-53 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 N288_10125 79b128af0d0bece324ee62d9266425c7 192 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 187 6.5E-63 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 N288_10125 79b128af0d0bece324ee62d9266425c7 192 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 81 1.2E-17 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 N288_10125 79b128af0d0bece324ee62d9266425c7 192 Gene3D G3DSA:1.20.120.1760 3 185 7.0E-10 T 12-10-2018 N288_10125 79b128af0d0bece324ee62d9266425c7 192 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 59 81 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 N288_19700 0249b7679f1aa7ad15678a7dae1b9069 226 SMART SM00849 7 192 1.3E-8 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_19700 0249b7679f1aa7ad15678a7dae1b9069 226 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 226 37.687 T 12-10-2018 IPR022877 Protein of unknown funcion UPF0173 N288_19700 0249b7679f1aa7ad15678a7dae1b9069 226 Gene3D G3DSA:3.60.15.10 1 226 1.0E-73 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_19700 0249b7679f1aa7ad15678a7dae1b9069 226 SUPERFAMILY SSF56281 1 210 5.96E-37 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_19700 0249b7679f1aa7ad15678a7dae1b9069 226 Pfam PF13483 Beta-lactamase superfamily domain 2 192 5.3E-24 T 12-10-2018 N288_00145 d3c7a8daf2ddbe3e71cd6ea009256b5d 106 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 105 3.9E-32 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family N288_00145 d3c7a8daf2ddbe3e71cd6ea009256b5d 106 Gene3D G3DSA:3.30.1310.10 1 106 2.1E-39 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily N288_00145 d3c7a8daf2ddbe3e71cd6ea009256b5d 106 PIRSF PIRSF004555 3 106 2.3E-40 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family N288_00145 d3c7a8daf2ddbe3e71cd6ea009256b5d 106 Pfam PF02575 YbaB/EbfC DNA-binding family 11 101 7.3E-35 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family N288_00145 d3c7a8daf2ddbe3e71cd6ea009256b5d 106 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 99 22.868 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family N288_00145 d3c7a8daf2ddbe3e71cd6ea009256b5d 106 SUPERFAMILY SSF82607 11 105 3.01E-34 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily N288_11315 1b6ad3a9d8d18d66041c57afb8a9131c 204 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 8 192 2.0E-82 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 N288_11315 1b6ad3a9d8d18d66041c57afb8a9131c 204 Gene3D G3DSA:3.40.50.300 3 199 7.8E-82 T 12-10-2018 N288_11315 1b6ad3a9d8d18d66041c57afb8a9131c 204 Pfam PF01583 Adenylylsulphate kinase 25 179 2.4E-72 T 12-10-2018 N288_11315 1b6ad3a9d8d18d66041c57afb8a9131c 204 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 24 196 38.571 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 N288_11315 1b6ad3a9d8d18d66041c57afb8a9131c 204 SUPERFAMILY SSF52540 24 194 6.65E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_14530 02a304715b8a17e9fdb98aca518ee666 377 Pfam PF08874 Domain of unknown function (DUF1835) 103 218 1.0E-28 T 12-10-2018 IPR014973 Protein of unknown function DUF1835 N288_14530 02a304715b8a17e9fdb98aca518ee666 377 Pfam PF12395 Protein of unknown function 253 363 2.0E-30 T 12-10-2018 IPR022123 Protein of unknown function DUF3658 N288_05980 a27baa8e3bde33ab0129aa408a6f2d9b 389 TIGRFAM TIGR02877 spore_yhbH: sporulation protein YhbH 9 380 1.5E-183 T 12-10-2018 IPR014230 Sporulation protein YhbH N288_05980 a27baa8e3bde33ab0129aa408a6f2d9b 389 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 7 385 31.903 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 N288_05980 a27baa8e3bde33ab0129aa408a6f2d9b 389 Pfam PF04285 Protein of unknown function (DUF444) 11 187 3.6E-35 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 N288_05980 a27baa8e3bde33ab0129aa408a6f2d9b 389 Pfam PF04285 Protein of unknown function (DUF444) 192 383 3.5E-67 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 N288_17595 e5c5092eed67c0c4f5811d678636123e 281 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 263 1.3E-79 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 N288_17595 e5c5092eed67c0c4f5811d678636123e 281 SUPERFAMILY SSF51735 2 160 4.41E-31 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_17595 e5c5092eed67c0c4f5811d678636123e 281 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 N288_17595 e5c5092eed67c0c4f5811d678636123e 281 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 99 4.4E-20 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal N288_17595 e5c5092eed67c0c4f5811d678636123e 281 PIRSF PIRSF000193 1 269 2.2E-76 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 N288_17595 e5c5092eed67c0c4f5811d678636123e 281 Gene3D G3DSA:1.10.3730.10 165 270 6.5E-38 T 12-10-2018 N288_17595 e5c5092eed67c0c4f5811d678636123e 281 SUPERFAMILY SSF48179 161 268 3.74E-32 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_17595 e5c5092eed67c0c4f5811d678636123e 281 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 266 25.243 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 N288_17595 e5c5092eed67c0c4f5811d678636123e 281 Gene3D G3DSA:3.40.50.720 1 164 8.0E-47 T 12-10-2018 N288_17595 e5c5092eed67c0c4f5811d678636123e 281 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 263 4.7E-35 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 N288_21525 9f412a1e6a1567e53565ea3aa9a64b62 505 SUPERFAMILY SSF161098 13 200 1.05E-42 T 12-10-2018 IPR035906 MetI-like superfamily N288_21525 9f412a1e6a1567e53565ea3aa9a64b62 505 Gene3D G3DSA:1.10.3720.10 11 230 6.4E-34 T 12-10-2018 IPR035906 MetI-like superfamily N288_21525 9f412a1e6a1567e53565ea3aa9a64b62 505 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 205 5.6E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_21525 9f412a1e6a1567e53565ea3aa9a64b62 505 SUPERFAMILY SSF53850 235 504 6.51E-72 T 12-10-2018 N288_21525 9f412a1e6a1567e53565ea3aa9a64b62 505 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 235 500 4.9E-64 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 N288_21525 9f412a1e6a1567e53565ea3aa9a64b62 505 Gene3D G3DSA:3.40.190.120 339 442 1.1E-97 T 12-10-2018 N288_21525 9f412a1e6a1567e53565ea3aa9a64b62 505 Gene3D G3DSA:3.40.190.10 246 504 1.1E-97 T 12-10-2018 N288_11755 ec05fe553afbee545ecf780851d95b27 195 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 184 8.3E-54 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 N288_11755 ec05fe553afbee545ecf780851d95b27 195 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 5 194 5.9E-63 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 N288_11755 ec05fe553afbee545ecf780851d95b27 195 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 193 20.355 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 N288_11755 ec05fe553afbee545ecf780851d95b27 195 SMART SM01207 8 185 1.5E-83 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 N288_11850 c002c6ab91524ae5f402f40818ef28d0 623 Gene3D G3DSA:3.30.565.10 2 228 2.9E-70 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_11850 c002c6ab91524ae5f402f40818ef28d0 623 Gene3D G3DSA:3.40.50.11260 403 489 9.1E-27 T 12-10-2018 N288_11850 c002c6ab91524ae5f402f40818ef28d0 623 SUPERFAMILY SSF55874 3 210 1.64E-59 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_11850 c002c6ab91524ae5f402f40818ef28d0 623 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 623 26.67 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 N288_11850 c002c6ab91524ae5f402f40818ef28d0 623 Pfam PF00183 Hsp90 protein 224 622 1.2E-109 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 N288_11850 c002c6ab91524ae5f402f40818ef28d0 623 SUPERFAMILY SSF54211 236 488 2.88E-82 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_11850 c002c6ab91524ae5f402f40818ef28d0 623 Gene3D G3DSA:1.20.120.790 490 623 1.0E-34 T 12-10-2018 IPR037196 HSP90, C-terminal domain N288_11850 c002c6ab91524ae5f402f40818ef28d0 623 SUPERFAMILY SSF110942 509 622 2.09E-28 T 12-10-2018 IPR037196 HSP90, C-terminal domain N288_11850 c002c6ab91524ae5f402f40818ef28d0 623 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 150 1.1E-13 T 12-10-2018 N288_11850 c002c6ab91524ae5f402f40818ef28d0 623 PIRSF PIRSF002583 1 623 7.5E-198 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 N288_11850 c002c6ab91524ae5f402f40818ef28d0 623 Gene3D G3DSA:3.30.230.80 235 402 6.9E-56 T 12-10-2018 N288_11850 c002c6ab91524ae5f402f40818ef28d0 623 PRINTS PR00775 90kDa heat shock protein signature 2 22 9.5E-51 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal N288_11850 c002c6ab91524ae5f402f40818ef28d0 623 PRINTS PR00775 90kDa heat shock protein signature 23 45 9.5E-51 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal N288_11850 c002c6ab91524ae5f402f40818ef28d0 623 PRINTS PR00775 90kDa heat shock protein signature 165 182 9.5E-51 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal N288_11850 c002c6ab91524ae5f402f40818ef28d0 623 PRINTS PR00775 90kDa heat shock protein signature 72 89 9.5E-51 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal N288_11850 c002c6ab91524ae5f402f40818ef28d0 623 PRINTS PR00775 90kDa heat shock protein signature 188 206 9.5E-51 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal N288_11850 c002c6ab91524ae5f402f40818ef28d0 623 PRINTS PR00775 90kDa heat shock protein signature 90 107 9.5E-51 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal N288_11850 c002c6ab91524ae5f402f40818ef28d0 623 PRINTS PR00775 90kDa heat shock protein signature 115 137 9.5E-51 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal N288_20310 96114e8a603fbfb22288b41e9fe7aa4a 267 SUPERFAMILY SSF161098 71 257 4.32E-30 T 12-10-2018 IPR035906 MetI-like superfamily N288_20310 96114e8a603fbfb22288b41e9fe7aa4a 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 264 3.8E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_20310 96114e8a603fbfb22288b41e9fe7aa4a 267 Gene3D G3DSA:1.10.3720.10 71 266 2.7E-23 T 12-10-2018 IPR035906 MetI-like superfamily N288_02565 a7b9e6f4f159ad37822b73a033e753f5 246 Pfam PF04536 TPM domain 39 161 9.0E-35 T 12-10-2018 IPR007621 TPM domain N288_02565 a7b9e6f4f159ad37822b73a033e753f5 246 Gene3D G3DSA:3.10.310.50 26 170 1.7E-45 T 12-10-2018 N288_10235 c6055a542e872cb584e3fbc77d3ba6a9 335 Gene3D G3DSA:3.90.640.10 181 254 2.1E-122 T 12-10-2018 N288_10235 c6055a542e872cb584e3fbc77d3ba6a9 335 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 5 331 8.8E-135 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_10235 c6055a542e872cb584e3fbc77d3ba6a9 335 Gene3D G3DSA:3.30.420.40 149 312 2.1E-122 T 12-10-2018 N288_10235 c6055a542e872cb584e3fbc77d3ba6a9 335 Pfam PF06723 MreB/Mbl protein 5 331 1.1E-141 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_10235 c6055a542e872cb584e3fbc77d3ba6a9 335 Gene3D G3DSA:3.30.420.40 7 322 2.1E-122 T 12-10-2018 N288_10235 c6055a542e872cb584e3fbc77d3ba6a9 335 SUPERFAMILY SSF53067 144 328 6.49E-46 T 12-10-2018 N288_10235 c6055a542e872cb584e3fbc77d3ba6a9 335 SUPERFAMILY SSF53067 6 143 1.66E-40 T 12-10-2018 N288_10235 c6055a542e872cb584e3fbc77d3ba6a9 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 62 85 2.2E-55 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_10235 c6055a542e872cb584e3fbc77d3ba6a9 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 295 321 2.2E-55 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_10235 c6055a542e872cb584e3fbc77d3ba6a9 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 127 146 2.2E-55 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_10235 c6055a542e872cb584e3fbc77d3ba6a9 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 182 202 2.2E-55 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_10235 c6055a542e872cb584e3fbc77d3ba6a9 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 42 60 2.2E-55 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_17870 57228178a82924fddc3f4597f89f2e49 399 Pfam PF09546 Stage III sporulation protein AE (spore_III_AE) 78 392 4.9E-105 T 12-10-2018 IPR014194 Sporulation stage III, protein AE N288_17870 57228178a82924fddc3f4597f89f2e49 399 TIGRFAM TIGR02829 spore_III_AE: stage III sporulation protein AE 4 392 3.5E-145 T 12-10-2018 IPR014194 Sporulation stage III, protein AE N288_12675 f94713180e829db8ff2862fe4dc0fd6c 364 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 7 360 3.2E-59 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 N288_12675 f94713180e829db8ff2862fe4dc0fd6c 364 Gene3D G3DSA:1.20.1740.10 4 359 1.9E-10 T 12-10-2018 N288_12675 f94713180e829db8ff2862fe4dc0fd6c 364 Pfam PF03845 Spore germination protein 7 325 6.5E-62 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 N288_16580 0e8aaf84fc62ffb2b6bd582787857691 233 Hamap MF_02088 Probable queuosine precursor transporter. 26 229 17.318 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 N288_16580 0e8aaf84fc62ffb2b6bd582787857691 233 Pfam PF02592 Putative vitamin uptake transporter 57 217 1.9E-53 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 N288_16580 0e8aaf84fc62ffb2b6bd582787857691 233 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 26 223 2.9E-70 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 N288_08670 b0db1100e1f57297075fde10144cd2d3 78 Gene3D G3DSA:3.30.720.20 1 78 4.4E-31 T 12-10-2018 IPR038073 YkuJ-like superfamily N288_08670 b0db1100e1f57297075fde10144cd2d3 78 SUPERFAMILY SSF143567 2 78 3.27E-28 T 12-10-2018 IPR038073 YkuJ-like superfamily N288_08670 b0db1100e1f57297075fde10144cd2d3 78 PIRSF PIRSF037356 1 78 2.1E-30 T 12-10-2018 IPR014904 Protein of unknown function DUF1797 N288_08670 b0db1100e1f57297075fde10144cd2d3 78 Pfam PF08796 Protein of unknown function (DUF1797) 7 77 2.5E-27 T 12-10-2018 IPR014904 Protein of unknown function DUF1797 N288_00125 99eba4c6fb776c8e6f4f1e363495b6e5 428 Pfam PF00704 Glycosyl hydrolases family 18 152 408 8.7E-24 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 N288_00125 99eba4c6fb776c8e6f4f1e363495b6e5 428 SUPERFAMILY SSF54106 2 47 8.76E-10 T 12-10-2018 N288_00125 99eba4c6fb776c8e6f4f1e363495b6e5 428 Gene3D G3DSA:3.10.350.10 52 96 7.9E-12 T 12-10-2018 IPR036779 LysM domain superfamily N288_00125 99eba4c6fb776c8e6f4f1e363495b6e5 428 SMART SM00257 3 47 6.8E-14 T 12-10-2018 IPR018392 LysM domain N288_00125 99eba4c6fb776c8e6f4f1e363495b6e5 428 SMART SM00257 52 96 2.0E-9 T 12-10-2018 IPR018392 LysM domain N288_00125 99eba4c6fb776c8e6f4f1e363495b6e5 428 Gene3D G3DSA:3.10.350.10 1 51 3.6E-13 T 12-10-2018 IPR036779 LysM domain superfamily N288_00125 99eba4c6fb776c8e6f4f1e363495b6e5 428 Gene3D G3DSA:3.10.50.10 323 381 1.2E-101 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily N288_00125 99eba4c6fb776c8e6f4f1e363495b6e5 428 SUPERFAMILY SSF54106 51 96 1.7E-9 T 12-10-2018 N288_00125 99eba4c6fb776c8e6f4f1e363495b6e5 428 SMART SM00636 103 410 1.1E-26 T 12-10-2018 IPR011583 Chitinase II GO:0008061 N288_00125 99eba4c6fb776c8e6f4f1e363495b6e5 428 SUPERFAMILY SSF51445 126 422 2.71E-44 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_00125 99eba4c6fb776c8e6f4f1e363495b6e5 428 Pfam PF01476 LysM domain 4 47 2.9E-11 T 12-10-2018 IPR018392 LysM domain N288_00125 99eba4c6fb776c8e6f4f1e363495b6e5 428 Pfam PF01476 LysM domain 53 96 1.3E-9 T 12-10-2018 IPR018392 LysM domain N288_00125 99eba4c6fb776c8e6f4f1e363495b6e5 428 Gene3D G3DSA:3.20.20.80 130 415 1.2E-101 T 12-10-2018 N288_04215 dae989b283a423b6beb8bc43c3d5e835 114 SMART SM00418 13 89 4.3E-22 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_04215 dae989b283a423b6beb8bc43c3d5e835 114 Pfam PF01022 Bacterial regulatory protein, arsR family 20 65 3.6E-15 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_04215 dae989b283a423b6beb8bc43c3d5e835 114 SUPERFAMILY SSF46785 6 80 2.2E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_04215 dae989b283a423b6beb8bc43c3d5e835 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 3.0E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_04215 dae989b283a423b6beb8bc43c3d5e835 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 3.0E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_04215 dae989b283a423b6beb8bc43c3d5e835 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 34 45 3.0E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_04215 dae989b283a423b6beb8bc43c3d5e835 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 3.0E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_04215 dae989b283a423b6beb8bc43c3d5e835 114 Gene3D G3DSA:1.10.10.10 1 97 6.1E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_09590 04f2ef4e0b54448c3dbbf1236f775f24 172 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 170 9.5E-52 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 N288_09590 04f2ef4e0b54448c3dbbf1236f775f24 172 Pfam PF01782 RimM N-terminal domain 7 91 4.8E-24 T 12-10-2018 IPR002676 RimM, N-terminal GO:0006364 N288_09590 04f2ef4e0b54448c3dbbf1236f775f24 172 SUPERFAMILY SSF50346 100 170 6.67E-20 T 12-10-2018 IPR011033 PRC-barrel-like superfamily N288_09590 04f2ef4e0b54448c3dbbf1236f775f24 172 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 170 25.242 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 N288_09590 04f2ef4e0b54448c3dbbf1236f775f24 172 Pfam PF05239 PRC-barrel domain 97 171 2.6E-12 T 12-10-2018 IPR027275 PRC-barrel domain N288_09590 04f2ef4e0b54448c3dbbf1236f775f24 172 SUPERFAMILY SSF50447 3 92 8.03E-23 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily N288_09590 04f2ef4e0b54448c3dbbf1236f775f24 172 Gene3D G3DSA:2.30.30.240 95 172 4.6E-22 T 12-10-2018 N288_09590 04f2ef4e0b54448c3dbbf1236f775f24 172 Gene3D G3DSA:2.40.30.60 5 93 4.8E-22 T 12-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 N288_19180 a60ee1621e55d6898e075fb7c7ca7532 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 1.9E-200 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 N288_19180 a60ee1621e55d6898e075fb7c7ca7532 429 Gene3D G3DSA:3.40.640.10 72 319 2.8E-182 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_19180 a60ee1621e55d6898e075fb7c7ca7532 429 SUPERFAMILY SSF53383 4 426 6.93E-131 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_19180 a60ee1621e55d6898e075fb7c7ca7532 429 Gene3D G3DSA:3.90.1150.10 10 421 2.8E-182 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_19180 a60ee1621e55d6898e075fb7c7ca7532 429 Pfam PF00202 Aminotransferase class-III 34 397 6.2E-76 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_19180 a60ee1621e55d6898e075fb7c7ca7532 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 427 104.748 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 N288_19180 a60ee1621e55d6898e075fb7c7ca7532 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_08910 60202af23d53c103b30842290c413f5f 151 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 15 90 2.3E-10 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 N288_08910 60202af23d53c103b30842290c413f5f 151 SUPERFAMILY SSF50475 10 89 1.15E-11 T 12-10-2018 N288_08910 60202af23d53c103b30842290c413f5f 151 Gene3D G3DSA:2.30.110.10 1 150 1.2E-64 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 N288_11515 41f6551614be23c22b32a4a565f4e5a4 352 SUPERFAMILY SSF52518 23 345 6.28E-103 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold N288_11515 41f6551614be23c22b32a4a565f4e5a4 352 Pfam PF00676 Dehydrogenase E1 component 37 322 3.6E-87 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 N288_11515 41f6551614be23c22b32a4a565f4e5a4 352 Gene3D G3DSA:3.40.50.970 1 349 6.7E-116 T 12-10-2018 N288_11515 41f6551614be23c22b32a4a565f4e5a4 352 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 8 344 9.7E-140 T 12-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 N288_21470 6c75a5315b8ae89733a353443fef0106 313 Gene3D G3DSA:3.40.50.300 2 234 4.5E-59 T 12-10-2018 N288_21470 6c75a5315b8ae89733a353443fef0106 313 SMART SM00382 30 211 4.9E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_21470 6c75a5315b8ae89733a353443fef0106 313 SUPERFAMILY SSF52540 5 228 1.16E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_21470 6c75a5315b8ae89733a353443fef0106 313 Pfam PF00005 ABC transporter 21 162 3.6E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_21470 6c75a5315b8ae89733a353443fef0106 313 Pfam PF13732 Domain of unknown function (DUF4162) 216 297 3.2E-11 T 12-10-2018 IPR025302 Domain of unknown function DUF4162 N288_07210 a74461a3b24d7afb0c0263ef28481d36 1163 Gene3D G3DSA:3.40.50.300 1 140 9.8E-35 T 12-10-2018 N288_07210 a74461a3b24d7afb0c0263ef28481d36 1163 Gene3D G3DSA:3.40.50.300 141 276 3.5E-29 T 12-10-2018 N288_07210 a74461a3b24d7afb0c0263ef28481d36 1163 Hamap MF_01452 ATP-dependent helicase/deoxyribonuclease subunit B [addB]. 1 1161 61.775 T 12-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 N288_07210 a74461a3b24d7afb0c0263ef28481d36 1163 Gene3D G3DSA:3.40.50.300 279 426 3.0E-28 T 12-10-2018 N288_07210 a74461a3b24d7afb0c0263ef28481d36 1163 Gene3D G3DSA:3.40.50.300 542 696 1.3E-39 T 12-10-2018 N288_07210 a74461a3b24d7afb0c0263ef28481d36 1163 Pfam PF12705 PD-(D/E)XK nuclease superfamily 789 1130 1.0E-58 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type N288_07210 a74461a3b24d7afb0c0263ef28481d36 1163 TIGRFAM TIGR02773 addB_Gpos: helicase-exonuclease AddAB, AddB subunit 1 1162 0.0 T 12-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 N288_07210 a74461a3b24d7afb0c0263ef28481d36 1163 SUPERFAMILY SSF52540 307 749 8.76E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_25125 42f6c9329579532b3184fdefa61aaa89 489 ProSitePatterns PS00217 Sugar transport proteins signature 2. 134 159 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_25125 42f6c9329579532b3184fdefa61aaa89 489 Pfam PF07690 Major Facilitator Superfamily 36 391 4.5E-37 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_25125 42f6c9329579532b3184fdefa61aaa89 489 Gene3D G3DSA:1.20.1250.20 23 450 4.3E-66 T 12-10-2018 N288_25125 42f6c9329579532b3184fdefa61aaa89 489 SUPERFAMILY SSF103473 18 441 4.45E-72 T 12-10-2018 IPR036259 MFS transporter superfamily N288_19790 34d29d9fceba89d8fd19917b0dcd6486 265 Hamap MF_00361 NAD kinase [nadK]. 3 265 20.913 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 N288_19790 34d29d9fceba89d8fd19917b0dcd6486 265 Gene3D G3DSA:3.40.50.10330 33 265 9.3E-76 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 N288_19790 34d29d9fceba89d8fd19917b0dcd6486 265 Pfam PF01513 ATP-NAD kinase 39 185 1.4E-16 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 N288_19790 34d29d9fceba89d8fd19917b0dcd6486 265 SUPERFAMILY SSF111331 7 264 1.7E-58 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily N288_19790 34d29d9fceba89d8fd19917b0dcd6486 265 Gene3D G3DSA:2.60.200.30 107 243 9.3E-76 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 N288_12355 880c3bd3d38114a0b1d28cde9b2cb379 258 SUPERFAMILY SSF51445 46 255 1.79E-35 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_12355 880c3bd3d38114a0b1d28cde9b2cb379 258 Gene3D G3DSA:3.20.20.80 45 257 1.3E-63 T 12-10-2018 N288_12355 880c3bd3d38114a0b1d28cde9b2cb379 258 Pfam PF08924 Domain of unknown function (DUF1906) 72 173 5.9E-9 T 12-10-2018 IPR015020 Protein of unknown function DUF1906 N288_07725 be86b85a60a0e060ae04386aeb433b4b 265 Gene3D G3DSA:2.60.200.30 102 240 2.1E-98 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 N288_07725 be86b85a60a0e060ae04386aeb433b4b 265 SUPERFAMILY SSF111331 15 261 8.63E-63 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily N288_07725 be86b85a60a0e060ae04386aeb433b4b 265 Gene3D G3DSA:3.40.50.10330 16 262 2.1E-98 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 N288_07725 be86b85a60a0e060ae04386aeb433b4b 265 Hamap MF_00361 NAD kinase [nadK]. 1 263 23.555 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 N288_07725 be86b85a60a0e060ae04386aeb433b4b 265 Pfam PF01513 ATP-NAD kinase 34 184 3.6E-21 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 N288_20145 2aeebce7ad389fde1d8230ccbddf296c 439 Pfam PF02447 GntP family permease 4 433 2.2E-8 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 N288_25540 ed816553f961fc176c35c91063845b1c 326 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 319 2.0E-106 T 12-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 N288_25540 ed816553f961fc176c35c91063845b1c 326 Pfam PF03812 2-keto-3-deoxygluconate permease 3 312 4.5E-111 T 12-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 N288_19950 3b769a8146cc1353d849f7ca976d5a1d 371 Gene3D G3DSA:3.40.1830.10 2 165 1.2E-12 T 12-10-2018 IPR035097 Peptidase M29, N-terminal N288_19950 3b769a8146cc1353d849f7ca976d5a1d 371 Pfam PF02073 Thermophilic metalloprotease (M29) 3 356 5.8E-60 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 N288_19950 3b769a8146cc1353d849f7ca976d5a1d 371 SUPERFAMILY SSF144052 1 360 2.49E-114 T 12-10-2018 N288_08570 50d658bde6b2d6283d76f15b9057973c 177 Pfam PF06271 RDD family 16 171 2.3E-26 T 12-10-2018 IPR010432 RDD N288_22365 d1df1a7032cfd3b083cb99985195f309 489 PIRSF PIRSF003059 1 488 2.4E-139 T 12-10-2018 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related N288_22365 d1df1a7032cfd3b083cb99985195f309 489 Gene3D G3DSA:3.20.20.80 9 416 1.7E-118 T 12-10-2018 N288_22365 d1df1a7032cfd3b083cb99985195f309 489 SUPERFAMILY SSF51445 4 433 1.08E-66 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_22365 d1df1a7032cfd3b083cb99985195f309 489 SMART SM00642 25 431 4.7E-4 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_22365 d1df1a7032cfd3b083cb99985195f309 489 Gene3D G3DSA:3.90.400.10 88 176 1.7E-118 T 12-10-2018 N288_22365 d1df1a7032cfd3b083cb99985195f309 489 Pfam PF00128 Alpha amylase, catalytic domain 39 207 9.2E-12 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 N288_22365 d1df1a7032cfd3b083cb99985195f309 489 TIGRFAM TIGR03852 sucrose_gtfA: sucrose phosphorylase 5 476 2.5E-156 T 12-10-2018 IPR022527 Sucrose phosphorylase GO:0004645|GO:0044262 N288_07295 eabbf0365f7b7dff6be19979a09986d6 368 SUPERFAMILY SSF55874 270 358 7.31E-5 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_07295 eabbf0365f7b7dff6be19979a09986d6 368 Pfam PF07730 Histidine kinase 177 235 2.6E-12 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 N288_07295 eabbf0365f7b7dff6be19979a09986d6 368 Gene3D G3DSA:3.30.565.10 242 363 2.2E-14 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_12010 0240a3f13c914484768582511d52ed01 321 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 3 318 5.2E-105 T 12-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 N288_12010 0240a3f13c914484768582511d52ed01 321 SUPERFAMILY SSF51679 1 319 1.24E-70 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 N288_12010 0240a3f13c914484768582511d52ed01 321 Gene3D G3DSA:3.20.20.30 1 321 2.6E-96 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 N288_12010 0240a3f13c914484768582511d52ed01 321 Pfam PF00296 Luciferase-like monooxygenase 1 293 1.5E-34 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 N288_22170 7a364629fb0921c4c174efbd14f49047 1170 Pfam PF00082 Subtilase family 160 406 8.0E-54 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 N288_22170 7a364629fb0921c4c174efbd14f49047 1170 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 200 210 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site N288_22170 7a364629fb0921c4c174efbd14f49047 1170 SUPERFAMILY SSF52743 143 416 4.19E-89 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 N288_22170 7a364629fb0921c4c174efbd14f49047 1170 Gene3D G3DSA:2.60.120.380 1044 1167 1.5E-12 T 12-10-2018 N288_22170 7a364629fb0921c4c174efbd14f49047 1170 PRINTS PR00723 Subtilisin serine protease family (S8) signature 159 178 3.0E-14 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_22170 7a364629fb0921c4c174efbd14f49047 1170 PRINTS PR00723 Subtilisin serine protease family (S8) signature 355 371 3.0E-14 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_22170 7a364629fb0921c4c174efbd14f49047 1170 PRINTS PR00723 Subtilisin serine protease family (S8) signature 196 209 3.0E-14 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related N288_22170 7a364629fb0921c4c174efbd14f49047 1170 Gene3D G3DSA:2.60.120.380 776 892 1.7E-6 T 12-10-2018 N288_22170 7a364629fb0921c4c174efbd14f49047 1170 Gene3D G3DSA:3.40.50.200 104 422 4.7E-94 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 N288_22170 7a364629fb0921c4c174efbd14f49047 1170 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 356 366 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site N288_23005 345af6096db1332d179de3114ec2cca6 559 Gene3D G3DSA:1.10.10.10 297 373 1.9E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_23005 345af6096db1332d179de3114ec2cca6 559 Gene3D G3DSA:3.40.50.10490 387 559 3.3E-26 T 12-10-2018 N288_23005 345af6096db1332d179de3114ec2cca6 559 SUPERFAMILY SSF53697 392 542 9.1E-21 T 12-10-2018 N288_23005 345af6096db1332d179de3114ec2cca6 559 Gene3D G3DSA:3.30.420.40 5 285 2.1E-74 T 12-10-2018 N288_23005 345af6096db1332d179de3114ec2cca6 559 SUPERFAMILY SSF46689 299 371 7.17E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_23005 345af6096db1332d179de3114ec2cca6 559 Gene3D G3DSA:3.30.420.40 125 275 2.1E-74 T 12-10-2018 N288_23005 345af6096db1332d179de3114ec2cca6 559 Pfam PF01380 SIS domain 418 522 6.4E-13 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 N288_23005 345af6096db1332d179de3114ec2cca6 559 Pfam PF00480 ROK family 5 286 6.9E-47 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 N288_23005 345af6096db1332d179de3114ec2cca6 559 SUPERFAMILY SSF53067 1 290 3.11E-58 T 12-10-2018 N288_23005 345af6096db1332d179de3114ec2cca6 559 Pfam PF01418 Helix-turn-helix domain, rpiR family 301 368 1.7E-16 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 N288_19995 267ddb9daf7e6e53d61e4d143dad1c70 148 TIGRFAM TIGR03646 YtoQ_fam: YtoQ family protein 3 146 1.8E-66 T 12-10-2018 IPR019884 YtoQ family protein N288_19995 267ddb9daf7e6e53d61e4d143dad1c70 148 Pfam PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ 6 145 4.7E-65 T 12-10-2018 IPR019884 YtoQ family protein N288_24530 5b5516bd37e1d1a722f374cc16921e0b 370 SUPERFAMILY SSF56300 6 200 2.22E-33 T 12-10-2018 N288_24530 5b5516bd37e1d1a722f374cc16921e0b 370 Gene3D G3DSA:3.60.21.10 3 251 9.1E-38 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_24530 5b5516bd37e1d1a722f374cc16921e0b 370 Pfam PF00149 Calcineurin-like phosphoesterase 14 207 2.3E-14 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 N288_21905 5bd9976dfc14e9e02565dc630093c4a1 228 SUPERFAMILY SSF52540 1 222 4.36E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_21905 5bd9976dfc14e9e02565dc630093c4a1 228 Pfam PF00005 ABC transporter 19 165 5.8E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_21905 5bd9976dfc14e9e02565dc630093c4a1 228 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_21905 5bd9976dfc14e9e02565dc630093c4a1 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 2.4E-88 T 12-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 N288_21905 5bd9976dfc14e9e02565dc630093c4a1 228 SMART SM00382 27 222 1.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_21905 5bd9976dfc14e9e02565dc630093c4a1 228 Gene3D G3DSA:3.40.50.300 1 224 1.9E-65 T 12-10-2018 N288_23425 91c6aace5b0bf6b188bef7d375c2d34d 656 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 460 574 9.9E-16 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 N288_23425 91c6aace5b0bf6b188bef7d375c2d34d 656 Gene3D G3DSA:2.30.30.40 590 651 1.1E-6 T 12-10-2018 N288_23425 91c6aace5b0bf6b188bef7d375c2d34d 656 Pfam PF00395 S-layer homology domain 84 127 6.0E-11 T 12-10-2018 IPR001119 S-layer homology domain N288_23425 91c6aace5b0bf6b188bef7d375c2d34d 656 Pfam PF00395 S-layer homology domain 147 195 0.0017 T 12-10-2018 IPR001119 S-layer homology domain N288_23425 91c6aace5b0bf6b188bef7d375c2d34d 656 Pfam PF00395 S-layer homology domain 30 69 5.3E-7 T 12-10-2018 IPR001119 S-layer homology domain N288_23425 91c6aace5b0bf6b188bef7d375c2d34d 656 SMART SM00047 447 582 2.5E-5 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 N288_23425 91c6aace5b0bf6b188bef7d375c2d34d 656 Gene3D G3DSA:1.10.530.10 454 577 1.1E-11 T 12-10-2018 N288_16590 6bb280db0f2039abf7288f87d0daa17c 307 SUPERFAMILY SSF103481 42 144 9.81E-10 T 12-10-2018 N288_16590 6bb280db0f2039abf7288f87d0daa17c 307 Pfam PF00892 EamA-like transporter family 8 141 1.2E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_16590 6bb280db0f2039abf7288f87d0daa17c 307 Pfam PF00892 EamA-like transporter family 150 288 9.6E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_16590 6bb280db0f2039abf7288f87d0daa17c 307 SUPERFAMILY SSF103481 214 296 6.02E-13 T 12-10-2018 N288_23375 ba9515eb331f513ac2dd8410702c9ffa 237 Hamap MF_02070 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase. 2 237 58.417 T 12-10-2018 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase GO:0047244 MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 N288_23375 ba9515eb331f513ac2dd8410702c9ffa 237 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 55 229 4.1E-62 T 12-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 N288_23375 ba9515eb331f513ac2dd8410702c9ffa 237 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 61 223 1.4E-61 T 12-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 N288_10660 ef14faafc79c3fcc0ef439597dc36f08 98 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 6 96 2.2E-14 T 12-10-2018 N288_10660 ef14faafc79c3fcc0ef439597dc36f08 98 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 22 39 5.2E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10660 ef14faafc79c3fcc0ef439597dc36f08 98 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 59 79 5.2E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_10660 ef14faafc79c3fcc0ef439597dc36f08 98 Gene3D G3DSA:3.40.50.720 5 98 4.6E-15 T 12-10-2018 N288_10660 ef14faafc79c3fcc0ef439597dc36f08 98 SUPERFAMILY SSF51735 6 97 2.8E-15 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_17845 5d2a3783671370d67b731848ed4bb8db 166 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 3 164 3.6E-56 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 N288_17845 5d2a3783671370d67b731848ed4bb8db 166 SUPERFAMILY SSF51230 87 163 9.29E-24 T 12-10-2018 IPR011053 Single hybrid motif N288_17845 5d2a3783671370d67b731848ed4bb8db 166 Gene3D G3DSA:2.40.50.100 85 163 1.1E-29 T 12-10-2018 N288_17845 5d2a3783671370d67b731848ed4bb8db 166 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 125 138 2.7E-16 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 N288_17845 5d2a3783671370d67b731848ed4bb8db 166 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 110 124 2.7E-16 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 N288_17845 5d2a3783671370d67b731848ed4bb8db 166 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 93 106 2.7E-16 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 N288_17845 5d2a3783671370d67b731848ed4bb8db 166 Pfam PF00364 Biotin-requiring enzyme 90 161 1.5E-23 T 12-10-2018 IPR000089 Biotin/lipoyl attachment N288_23910 be30a72e2cec4feb942f1518362f77aa 535 Pfam PF00117 Glutamine amidotransferase class-I 302 525 5.8E-58 T 12-10-2018 IPR017926 Glutamine amidotransferase N288_23910 be30a72e2cec4feb942f1518362f77aa 535 TIGRFAM TIGR00337 PyrG: CTP synthase 1 527 1.6E-262 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 N288_23910 be30a72e2cec4feb942f1518362f77aa 535 Gene3D G3DSA:3.40.50.880 288 535 2.2E-102 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_23910 be30a72e2cec4feb942f1518362f77aa 535 Hamap MF_01227 CTP synthase [pyrG]. 2 532 52.483 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 N288_23910 be30a72e2cec4feb942f1518362f77aa 535 SUPERFAMILY SSF52317 290 533 7.34E-84 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_23910 be30a72e2cec4feb942f1518362f77aa 535 Pfam PF06418 CTP synthase N-terminus 3 267 8.7E-130 T 12-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 N288_23910 be30a72e2cec4feb942f1518362f77aa 535 Gene3D G3DSA:3.40.50.300 1 286 7.2E-135 T 12-10-2018 N288_23910 be30a72e2cec4feb942f1518362f77aa 535 SUPERFAMILY SSF52540 1 269 7.5E-127 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_24430 4f00d3bef69a55adcb79394cb086b833 451 Pfam PF02056 Family 4 glycosyl hydrolase 5 185 1.8E-52 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 N288_24430 4f00d3bef69a55adcb79394cb086b833 451 Gene3D G3DSA:3.90.110.10 168 447 6.7E-87 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 N288_24430 4f00d3bef69a55adcb79394cb086b833 451 Gene3D G3DSA:3.40.50.720 2 167 8.7E-53 T 12-10-2018 N288_24430 4f00d3bef69a55adcb79394cb086b833 451 SUPERFAMILY SSF56327 169 441 8.63E-79 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 N288_24430 4f00d3bef69a55adcb79394cb086b833 451 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 195 416 7.3E-46 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 N288_24430 4f00d3bef69a55adcb79394cb086b833 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 2.9E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 N288_24430 4f00d3bef69a55adcb79394cb086b833 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 109 129 2.9E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 N288_24430 4f00d3bef69a55adcb79394cb086b833 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 2.9E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 N288_24430 4f00d3bef69a55adcb79394cb086b833 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 95 108 2.9E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 N288_24430 4f00d3bef69a55adcb79394cb086b833 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 191 203 2.9E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 N288_24430 4f00d3bef69a55adcb79394cb086b833 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 165 176 2.9E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 N288_24430 4f00d3bef69a55adcb79394cb086b833 451 SUPERFAMILY SSF51735 3 166 9.57E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_04530 322ba8a60a410f45389bf8b4bff9d2b0 311 Pfam PF12833 Helix-turn-helix domain 30 109 4.7E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_04530 322ba8a60a410f45389bf8b4bff9d2b0 311 SUPERFAMILY SSF46689 61 112 1.21E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_04530 322ba8a60a410f45389bf8b4bff9d2b0 311 SMART SM00342 24 108 6.2E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_04530 322ba8a60a410f45389bf8b4bff9d2b0 311 Gene3D G3DSA:1.10.10.60 58 111 6.5E-15 T 12-10-2018 N288_04530 322ba8a60a410f45389bf8b4bff9d2b0 311 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 61 104 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 N288_04530 322ba8a60a410f45389bf8b4bff9d2b0 311 SMART SM00871 151 309 1.2E-5 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding N288_04530 322ba8a60a410f45389bf8b4bff9d2b0 311 Gene3D G3DSA:3.20.80.10 152 310 9.8E-22 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily N288_04530 322ba8a60a410f45389bf8b4bff9d2b0 311 Pfam PF06445 GyrI-like small molecule binding domain 169 281 2.9E-13 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain N288_04530 322ba8a60a410f45389bf8b4bff9d2b0 311 SUPERFAMILY SSF55136 155 283 1.05E-15 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily N288_04530 322ba8a60a410f45389bf8b4bff9d2b0 311 SUPERFAMILY SSF46689 9 58 4.12E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_04530 322ba8a60a410f45389bf8b4bff9d2b0 311 Gene3D G3DSA:1.10.10.60 2 57 2.3E-17 T 12-10-2018 N288_04530 322ba8a60a410f45389bf8b4bff9d2b0 311 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 77 92 2.9E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 N288_04530 322ba8a60a410f45389bf8b4bff9d2b0 311 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 92 108 2.9E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 N288_09315 73b681e7222e3c01f6d7b6d174fdf03a 180 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 4 179 39.391 T 12-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 N288_09315 73b681e7222e3c01f6d7b6d174fdf03a 180 SUPERFAMILY SSF53271 6 174 7.74E-42 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like N288_09315 73b681e7222e3c01f6d7b6d174fdf03a 180 Pfam PF00156 Phosphoribosyl transferase domain 7 155 8.7E-21 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 N288_09315 73b681e7222e3c01f6d7b6d174fdf03a 180 Gene3D G3DSA:3.40.50.2020 1 180 3.8E-61 T 12-10-2018 N288_00645 a578ff07c53def9ab25faa768b455b0a 141 PIRSF PIRSF005520 1 139 1.2E-53 T 12-10-2018 IPR008226 Mini-ribonuclease 3 family N288_00645 a578ff07c53def9ab25faa768b455b0a 141 SUPERFAMILY SSF69065 9 130 1.74E-43 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 N288_00645 a578ff07c53def9ab25faa768b455b0a 141 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 7 133 30.809 T 12-10-2018 IPR008226 Mini-ribonuclease 3 family N288_00645 a578ff07c53def9ab25faa768b455b0a 141 Pfam PF00636 Ribonuclease III domain 17 115 9.5E-17 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 N288_00645 a578ff07c53def9ab25faa768b455b0a 141 SMART SM00535 2 136 1.5E-5 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 N288_00645 a578ff07c53def9ab25faa768b455b0a 141 Gene3D G3DSA:1.10.1520.10 5 140 1.5E-50 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 N288_18440 4ff22c10c952282c2ed17f8d48871c43 446 Pfam PF01972 Serine dehydrogenase proteinase 65 125 5.7E-7 T 12-10-2018 IPR002825 Peptidase S49, serine-peptidase prokaryotes GO:0016021 N288_18440 4ff22c10c952282c2ed17f8d48871c43 446 Gene3D G3DSA:3.90.226.10 27 235 3.6E-44 T 12-10-2018 N288_18440 4ff22c10c952282c2ed17f8d48871c43 446 Pfam PF01957 NfeD-like C-terminal, partner-binding 289 436 4.3E-17 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain N288_18440 4ff22c10c952282c2ed17f8d48871c43 446 SUPERFAMILY SSF52096 16 192 3.93E-19 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_18440 4ff22c10c952282c2ed17f8d48871c43 446 Gene3D G3DSA:2.40.50.140 377 445 9.0E-6 T 12-10-2018 N288_13110 5c05f09c88907e78c0952aff3cd9d3fd 307 SMART SM00422 9 79 4.7E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_13110 5c05f09c88907e78c0952aff3cd9d3fd 307 Gene3D G3DSA:1.10.1660.10 2 150 6.7E-16 T 12-10-2018 N288_13110 5c05f09c88907e78c0952aff3cd9d3fd 307 SUPERFAMILY SSF46955 9 82 2.38E-12 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily N288_13110 5c05f09c88907e78c0952aff3cd9d3fd 307 Pfam PF13411 MerR HTH family regulatory protein 9 77 8.3E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_25950 ce68f4aaff4cb212550db377bbcd170e 366 SUPERFAMILY SSF52540 3 304 7.32E-88 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_25950 ce68f4aaff4cb212550db377bbcd170e 366 Gene3D G3DSA:3.40.50.300 4 281 1.1E-157 T 12-10-2018 N288_25950 ce68f4aaff4cb212550db377bbcd170e 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.4E-35 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_25950 ce68f4aaff4cb212550db377bbcd170e 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.4E-35 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_25950 ce68f4aaff4cb212550db377bbcd170e 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.4E-35 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_25950 ce68f4aaff4cb212550db377bbcd170e 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.4E-35 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_25950 ce68f4aaff4cb212550db377bbcd170e 366 Gene3D G3DSA:1.10.150.300 113 200 1.1E-157 T 12-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 N288_25950 ce68f4aaff4cb212550db377bbcd170e 366 SUPERFAMILY SSF81271 282 363 1.42E-36 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 N288_25950 ce68f4aaff4cb212550db377bbcd170e 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 1.2E-40 T 12-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 N288_25950 ce68f4aaff4cb212550db377bbcd170e 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 46.281 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 N288_25950 ce68f4aaff4cb212550db377bbcd170e 366 Gene3D G3DSA:3.10.20.30 48 364 1.1E-157 T 12-10-2018 IPR012675 Beta-grasp domain superfamily N288_25950 ce68f4aaff4cb212550db377bbcd170e 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 4.3E-161 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 N288_25950 ce68f4aaff4cb212550db377bbcd170e 366 PIRSF PIRSF006641 1 366 1.4E-168 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 N288_25950 ce68f4aaff4cb212550db377bbcd170e 366 Pfam PF01926 50S ribosome-binding GTPase 5 125 1.5E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 N288_19915 ae31bf32161e2de25583f659d2465bbd 272 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 190 207 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site N288_19915 ae31bf32161e2de25583f659d2465bbd 272 Pfam PF01618 MotA/TolQ/ExbB proton channel family 106 220 7.9E-24 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel N288_13550 79c28cdabb111c77c5c77aca344b19d8 124 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 119 17.281 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 N288_13550 79c28cdabb111c77c5c77aca344b19d8 124 TIGRFAM TIGR00494 crcB: protein CrcB 5 118 8.5E-24 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 N288_13550 79c28cdabb111c77c5c77aca344b19d8 124 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 4 114 5.2E-22 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 N288_06205 9187d6bbee37a3f69091ccc00466285b 156 SUPERFAMILY SSF52833 47 152 2.16E-24 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_06205 9187d6bbee37a3f69091ccc00466285b 156 Pfam PF00085 Thioredoxin 63 152 3.7E-13 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 N288_06205 9187d6bbee37a3f69091ccc00466285b 156 Gene3D G3DSA:3.40.30.10 48 152 2.2E-20 T 12-10-2018 N288_03065 0371d651ce55b36565877a8ecb7d4367 141 Gene3D G3DSA:2.30.130.30 1 141 2.4E-24 T 12-10-2018 N288_03065 0371d651ce55b36565877a8ecb7d4367 141 SUPERFAMILY SSF88697 2 141 7.95E-22 T 12-10-2018 IPR015947 PUA-like superfamily N288_15710 6fdddb623070ae1f73249340d33a386c 347 SUPERFAMILY SSF47240 22 346 1.07E-81 T 12-10-2018 IPR009078 Ferritin-like superfamily N288_15710 6fdddb623070ae1f73249340d33a386c 347 PIRSF PIRSF000355 1 347 1.4E-118 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_15710 6fdddb623070ae1f73249340d33a386c 347 Pfam PF00268 Ribonucleotide reductase, small chain 32 309 6.5E-67 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_15710 6fdddb623070ae1f73249340d33a386c 347 Gene3D G3DSA:1.10.620.20 26 315 6.6E-87 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 N288_16835 7a0345f68779b23b4d7b95c6e4652477 920 Gene3D G3DSA:3.40.710.10 325 653 2.5E-216 T 12-10-2018 N288_16835 7a0345f68779b23b4d7b95c6e4652477 920 Pfam PF00905 Penicillin binding protein transpeptidase domain 353 637 6.7E-45 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 N288_16835 7a0345f68779b23b4d7b95c6e4652477 920 SUPERFAMILY SSF53955 72 279 1.38E-72 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily N288_16835 7a0345f68779b23b4d7b95c6e4652477 920 Gene3D G3DSA:2.60.40.10 696 785 8.3E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold N288_16835 7a0345f68779b23b4d7b95c6e4652477 920 Pfam PF00912 Transglycosylase 82 256 2.1E-62 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_16835 7a0345f68779b23b4d7b95c6e4652477 920 Gene3D G3DSA:3.90.1310.20 77 535 2.5E-216 T 12-10-2018 N288_16835 7a0345f68779b23b4d7b95c6e4652477 920 SUPERFAMILY SSF56601 238 698 6.64E-109 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_16835 7a0345f68779b23b4d7b95c6e4652477 920 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 92 642 4.1E-178 T 12-10-2018 N288_16835 7a0345f68779b23b4d7b95c6e4652477 920 SUPERFAMILY SSF49265 695 784 1.19E-6 T 12-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 N288_16835 7a0345f68779b23b4d7b95c6e4652477 920 Gene3D G3DSA:1.10.3810.10 92 284 2.5E-216 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_18110 07dfc93d87bd020ff38e8cc4bdeba6b5 625 PIRSF PIRSF005091 3 616 2.8E-191 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like N288_18110 07dfc93d87bd020ff38e8cc4bdeba6b5 625 Pfam PF00884 Sulfatase 245 533 1.8E-36 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 N288_18110 07dfc93d87bd020ff38e8cc4bdeba6b5 625 Gene3D G3DSA:3.40.720.10 237 543 6.4E-78 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 N288_18110 07dfc93d87bd020ff38e8cc4bdeba6b5 625 SUPERFAMILY SSF53649 243 620 1.16E-71 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 N288_13900 a943831e97b68f503ba4fff73faac85f 207 SUPERFAMILY SSF52218 4 187 6.55E-49 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_13900 a943831e97b68f503ba4fff73faac85f 207 Gene3D G3DSA:3.40.50.360 1 206 2.7E-66 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_13900 a943831e97b68f503ba4fff73faac85f 207 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 198 1.7E-53 T 12-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 N288_13900 a943831e97b68f503ba4fff73faac85f 207 Pfam PF03358 NADPH-dependent FMN reductase 12 148 2.1E-18 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 N288_09080 4cc4aa10fb84a1cc601ceefc16706b6e 408 Gene3D G3DSA:3.40.50.620 1 242 9.8E-43 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_09080 4cc4aa10fb84a1cc601ceefc16706b6e 408 Hamap MF_01539 UPF0348 protein . 2 402 40.472 T 12-10-2018 IPR008513 Uncharacterised protein family UPF0348 N288_09080 4cc4aa10fb84a1cc601ceefc16706b6e 408 Pfam PF05636 HIGH Nucleotidyl Transferase 1 385 3.2E-140 T 12-10-2018 IPR008513 Uncharacterised protein family UPF0348 N288_09080 4cc4aa10fb84a1cc601ceefc16706b6e 408 SUPERFAMILY SSF52374 1 238 4.5E-22 T 12-10-2018 N288_24455 1c225e067c6a579a8ffe206a9d029486 166 SUPERFAMILY SSF47741 77 151 1.24E-28 T 12-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily N288_24455 1c225e067c6a579a8ffe206a9d029486 166 SUPERFAMILY SSF54292 9 82 1.3E-19 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 N288_24455 1c225e067c6a579a8ffe206a9d029486 166 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 43 51 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 N288_24455 1c225e067c6a579a8ffe206a9d029486 166 Gene3D G3DSA:3.10.20.30 3 78 3.5E-26 T 12-10-2018 IPR012675 Beta-grasp domain superfamily N288_24455 1c225e067c6a579a8ffe206a9d029486 166 Pfam PF01799 [2Fe-2S] binding domain 77 145 2.3E-26 T 12-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 N288_24455 1c225e067c6a579a8ffe206a9d029486 166 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 55 2.9E-4 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 N288_24455 1c225e067c6a579a8ffe206a9d029486 166 Gene3D G3DSA:1.10.150.120 79 164 1.5E-26 T 12-10-2018 N288_16865 f47e114d8a36cf68798e59bf48368b8c 56 PIRSF PIRSF036698 1 56 1.4E-35 T 12-10-2018 IPR012190 Uncharacterised conserved protein UCP036698, YpmA N288_16865 f47e114d8a36cf68798e59bf48368b8c 56 Pfam PF14084 Protein of unknown function (DUF4264) 4 56 2.5E-25 T 12-10-2018 IPR012190 Uncharacterised conserved protein UCP036698, YpmA N288_17865 d4fc305a636730bfe488a103068bc811 206 Pfam PF09581 Stage III sporulation protein AF (Spore_III_AF) 12 198 9.6E-40 T 12-10-2018 IPR014245 Sporulation stage III, protein AF N288_17865 d4fc305a636730bfe488a103068bc811 206 TIGRFAM TIGR02896 spore_III_AF: stage III sporulation protein AF 2 111 3.8E-35 T 12-10-2018 IPR014245 Sporulation stage III, protein AF N288_17550 fc9113e7c3f915cae6e80f724caff1c1 310 Gene3D G3DSA:3.40.50.1820 55 306 1.5E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_17550 fc9113e7c3f915cae6e80f724caff1c1 310 SUPERFAMILY SSF53474 12 299 4.23E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_17550 fc9113e7c3f915cae6e80f724caff1c1 310 Pfam PF12146 Serine aminopeptidase, S33 81 202 1.5E-11 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 N288_13485 8153c4040f50e1814996babbe28ccebd 196 SUPERFAMILY SSF46689 4 77 1.05E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_13485 8153c4040f50e1814996babbe28ccebd 196 Gene3D G3DSA:1.10.357.10 4 189 1.1E-31 T 12-10-2018 N288_13485 8153c4040f50e1814996babbe28ccebd 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 4.4E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_13485 8153c4040f50e1814996babbe28ccebd 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 4.4E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_13485 8153c4040f50e1814996babbe28ccebd 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 3.9E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_21420 f333c660627255c2ddd09f53d07574f9 375 SUPERFAMILY SSF52821 3 110 6.42E-18 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_21420 f333c660627255c2ddd09f53d07574f9 375 Gene3D G3DSA:3.60.15.10 119 355 1.7E-45 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_21420 f333c660627255c2ddd09f53d07574f9 375 SMART SM00450 7 109 7.0E-10 T 12-10-2018 IPR001763 Rhodanese-like domain N288_21420 f333c660627255c2ddd09f53d07574f9 375 SMART SM00849 130 294 2.8E-25 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_21420 f333c660627255c2ddd09f53d07574f9 375 Pfam PF00581 Rhodanese-like domain 7 105 2.3E-7 T 12-10-2018 IPR001763 Rhodanese-like domain N288_21420 f333c660627255c2ddd09f53d07574f9 375 Gene3D G3DSA:3.40.250.10 2 111 1.2E-17 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily N288_21420 f333c660627255c2ddd09f53d07574f9 375 Pfam PF00753 Metallo-beta-lactamase superfamily 131 294 5.5E-11 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_21420 f333c660627255c2ddd09f53d07574f9 375 SUPERFAMILY SSF56281 124 370 1.03E-38 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_11560 7fbff39ddc5e3603af73f7ec95859678 248 PIRSF PIRSF000883 1 244 1.1E-46 T 12-10-2018 IPR011152 Phosphoesterase MJ0912 N288_11560 7fbff39ddc5e3603af73f7ec95859678 248 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 193 6.0E-20 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 N288_11560 7fbff39ddc5e3603af73f7ec95859678 248 SUPERFAMILY SSF56300 1 235 5.01E-43 T 12-10-2018 N288_11560 7fbff39ddc5e3603af73f7ec95859678 248 Gene3D G3DSA:3.60.21.10 1 248 4.6E-52 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_17675 c35c2a8f0de72d4fa81f0ee100199251 322 Gene3D G3DSA:1.20.120.940 142 315 1.6E-54 T 12-10-2018 IPR038323 Putative aromatic acid exporter, C-terminal domain superfamily N288_17675 c35c2a8f0de72d4fa81f0ee100199251 322 Pfam PF11728 Putative aromatic acid exporter C-terminal domain 147 311 5.9E-58 T 12-10-2018 IPR021062 Putative aromatic acid exporter, C-terminal N288_17675 c35c2a8f0de72d4fa81f0ee100199251 322 Pfam PF06081 Aromatic acid exporter family member 1 4 143 1.2E-49 T 12-10-2018 IPR010343 Aromatic acid exporter family member 1 N288_06395 befe9d3c077e84bd01c8c04a77ac4aa4 249 Pfam PF00005 ABC transporter 21 165 2.1E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_06395 befe9d3c077e84bd01c8c04a77ac4aa4 249 SUPERFAMILY SSF52540 2 230 1.85E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_06395 befe9d3c077e84bd01c8c04a77ac4aa4 249 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_06395 befe9d3c077e84bd01c8c04a77ac4aa4 249 Gene3D G3DSA:3.40.50.300 1 246 8.9E-68 T 12-10-2018 N288_06395 befe9d3c077e84bd01c8c04a77ac4aa4 249 SMART SM00382 30 222 7.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_12425 0891e02d19344a91919e932a32e7a826 259 Pfam PF13468 Glyoxalase-like domain 5 192 2.4E-39 T 12-10-2018 IPR025870 Glyoxalase-like domain N288_12425 0891e02d19344a91919e932a32e7a826 259 Gene3D G3DSA:3.10.180.10 2 158 4.4E-48 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_12255 1d495555721206de90be84ab0165b430 35 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 8 31 7.5E-13 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like N288_12255 1d495555721206de90be84ab0165b430 35 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 6 31 8.6E-15 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like N288_14265 6524e3d1e4f2436350ef758f8cedbf56 289 Pfam PF13673 Acetyltransferase (GNAT) domain 51 126 1.2E-5 T 12-10-2018 IPR000182 GNAT domain N288_14265 6524e3d1e4f2436350ef758f8cedbf56 289 Gene3D G3DSA:3.40.630.30 2 133 4.0E-13 T 12-10-2018 N288_14265 6524e3d1e4f2436350ef758f8cedbf56 289 Gene3D G3DSA:3.40.630.90 134 289 1.1E-6 T 12-10-2018 N288_14265 6524e3d1e4f2436350ef758f8cedbf56 289 SUPERFAMILY SSF55729 8 267 6.68E-34 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_25460 5e1c09770c2abf92000b8fcf1fd572ba 63 ProDom PD028561 MEMBRANE IMMUNITY SUPERINFECTION GP66 PROTEIN IMM GP75 IMM RB69 INTEGRAL 4 49 2.0E-6 T 12-10-2018 IPR016410 Bacteriophage-associated immunity protein N288_25460 5e1c09770c2abf92000b8fcf1fd572ba 63 Pfam PF14373 Superinfection immunity protein 12 53 1.2E-17 T 12-10-2018 IPR016410 Bacteriophage-associated immunity protein N288_22440 f2143b89ee390e2789ce3987f9ba8fe8 362 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 351 6.6E-157 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 N288_22440 f2143b89ee390e2789ce3987f9ba8fe8 362 PIRSF PIRSF016049 1 356 5.5E-124 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 N288_22440 f2143b89ee390e2789ce3987f9ba8fe8 362 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 350 1.1E-158 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 N288_22440 f2143b89ee390e2789ce3987f9ba8fe8 362 Gene3D G3DSA:3.20.20.150 1 355 1.7E-142 T 12-10-2018 N288_22440 f2143b89ee390e2789ce3987f9ba8fe8 362 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 362 160.704 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 N288_22440 f2143b89ee390e2789ce3987f9ba8fe8 362 SUPERFAMILY SSF51658 1 347 1.8E-88 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily N288_02285 cdea31ac64d2b1cac178256536af88d9 166 Pfam PF07883 Cupin domain 59 107 2.0E-8 T 12-10-2018 IPR013096 Cupin 2, conserved barrel N288_02285 cdea31ac64d2b1cac178256536af88d9 166 Gene3D G3DSA:2.60.120.10 32 130 3.3E-14 T 12-10-2018 IPR014710 RmlC-like jelly roll fold N288_02285 cdea31ac64d2b1cac178256536af88d9 166 SUPERFAMILY SSF51182 20 124 2.97E-22 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily N288_02285 cdea31ac64d2b1cac178256536af88d9 166 PIRSF PIRSF019307 1 166 9.0E-62 T 12-10-2018 IPR014500 Uncharacterised conserved protein UCP019307, cupin-type N288_15470 f67c0373686ba3b92d3567966d6fd80d 311 Gene3D G3DSA:3.60.15.10 27 307 2.6E-82 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_15470 f67c0373686ba3b92d3567966d6fd80d 311 SMART SM00849 63 264 0.0064 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_15470 f67c0373686ba3b92d3567966d6fd80d 311 Pfam PF12706 Beta-lactamase superfamily domain 75 265 2.0E-44 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_15470 f67c0373686ba3b92d3567966d6fd80d 311 PIRSF PIRSF038896 3 306 1.5E-93 T 12-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 N288_15470 f67c0373686ba3b92d3567966d6fd80d 311 SUPERFAMILY SSF56281 57 287 1.7E-38 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_25400 9cec6dc67a2214cf5da8c1bbe6ab819e 146 Pfam PF06713 Bacterial PH domain 63 139 1.2E-20 T 12-10-2018 IPR009589 Sublancin immunity protein SunI GO:0030153 N288_25730 aa655416fe715d926376d6923201f73c 672 Gene3D G3DSA:3.40.50.1820 25 259 1.3E-20 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_25730 aa655416fe715d926376d6923201f73c 672 Pfam PF12146 Serine aminopeptidase, S33 62 165 1.0E-8 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 N288_25730 aa655416fe715d926376d6923201f73c 672 SUPERFAMILY SSF53474 32 166 4.79E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_13260 1ecb69f3081ffcc24ea373514b972c67 259 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 3 239 3.3E-98 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 N288_13260 1ecb69f3081ffcc24ea373514b972c67 259 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 N288_13260 1ecb69f3081ffcc24ea373514b972c67 259 Gene3D G3DSA:3.40.1010.10 1 118 7.3E-45 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 N288_13260 1ecb69f3081ffcc24ea373514b972c67 259 Gene3D G3DSA:3.30.950.10 119 256 1.3E-48 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 N288_13260 1ecb69f3081ffcc24ea373514b972c67 259 SUPERFAMILY SSF53790 1 247 1.27E-81 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 N288_13260 1ecb69f3081ffcc24ea373514b972c67 259 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 215 1.8E-47 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 N288_08780 1aa1a7b3198f6796d466defc46be5c1d 221 Pfam PF10368 Putative cell-wall binding lipoprotein 15 215 7.4E-73 T 12-10-2018 IPR019454 Putative cell-wall binding lipoprotein YkyA-like N288_08780 1aa1a7b3198f6796d466defc46be5c1d 221 Gene3D G3DSA:1.20.120.570 15 210 5.5E-57 T 12-10-2018 IPR036785 YkyA-like superfamily N288_08780 1aa1a7b3198f6796d466defc46be5c1d 221 SUPERFAMILY SSF140423 26 214 9.42E-55 T 12-10-2018 IPR036785 YkyA-like superfamily N288_19215 acefca71f9ea056d207f562cdd8f1f00 245 PIRSF PIRSF039085 3 245 5.4E-118 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 N288_19215 acefca71f9ea056d207f562cdd8f1f00 245 SMART SM00382 31 218 3.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_19215 acefca71f9ea056d207f562cdd8f1f00 245 SUPERFAMILY SSF52540 6 240 5.7E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_19215 acefca71f9ea056d207f562cdd8f1f00 245 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_19215 acefca71f9ea056d207f562cdd8f1f00 245 Pfam PF00005 ABC transporter 22 170 1.8E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_19215 acefca71f9ea056d207f562cdd8f1f00 245 Gene3D G3DSA:3.40.50.300 4 245 3.5E-78 T 12-10-2018 N288_12645 3592411ac621d14241813c0792392c84 198 PIRSF PIRSF016661 1 186 1.6E-39 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 N288_12645 3592411ac621d14241813c0792392c84 198 Pfam PF02632 BioY family 36 182 7.2E-31 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 N288_12645 3592411ac621d14241813c0792392c84 198 Gene3D G3DSA:1.10.1760.20 1 188 1.8E-41 T 12-10-2018 N288_13800 43afa14c26c0e8aa0206c9645284a44c 84 Pfam PF13133 Protein of unknown function (DUF3949) 20 82 5.6E-32 T 12-10-2018 IPR025032 Protein of unknown function DUF3949 N288_07090 2c9bc333377e04ab2cc9955bbfe54da8 78 Pfam PF08858 IDEAL domain 34 69 1.7E-11 T 12-10-2018 IPR014957 IDEAL domain N288_07090 2c9bc333377e04ab2cc9955bbfe54da8 78 SMART SM00914 33 69 1.7E-4 T 12-10-2018 IPR014957 IDEAL domain N288_07090 2c9bc333377e04ab2cc9955bbfe54da8 78 Gene3D G3DSA:4.10.810.10 18 77 4.3E-10 T 12-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 N288_19660 69af9f0299cf4aeec116cc15b087127d 412 SUPERFAMILY SSF53223 6 158 8.63E-57 T 12-10-2018 N288_19660 69af9f0299cf4aeec116cc15b087127d 412 PIRSF PIRSF000106 45 115 4.0E-14 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 N288_19660 69af9f0299cf4aeec116cc15b087127d 412 PIRSF PIRSF000106 109 407 6.5E-74 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 N288_19660 69af9f0299cf4aeec116cc15b087127d 412 SUPERFAMILY SSF51735 160 401 7.89E-84 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_19660 69af9f0299cf4aeec116cc15b087127d 412 ProSitePatterns PS00331 Malic enzymes signature. 156 172 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 N288_19660 69af9f0299cf4aeec116cc15b087127d 412 SMART SM01274 15 148 3.1E-85 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 N288_19660 69af9f0299cf4aeec116cc15b087127d 412 Pfam PF00390 Malic enzyme, N-terminal domain 16 148 3.6E-30 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 N288_19660 69af9f0299cf4aeec116cc15b087127d 412 SMART SM00919 160 384 1.0E-130 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 N288_19660 69af9f0299cf4aeec116cc15b087127d 412 PRINTS PR00072 Malic enzyme signature 156 172 2.0E-8 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 N288_19660 69af9f0299cf4aeec116cc15b087127d 412 PRINTS PR00072 Malic enzyme signature 187 203 2.0E-8 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 N288_19660 69af9f0299cf4aeec116cc15b087127d 412 PRINTS PR00072 Malic enzyme signature 77 99 2.0E-8 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 N288_19660 69af9f0299cf4aeec116cc15b087127d 412 Pfam PF03949 Malic enzyme, NAD binding domain 162 383 3.0E-26 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 N288_19660 69af9f0299cf4aeec116cc15b087127d 412 Gene3D G3DSA:3.40.50.10380 1 157 1.2E-75 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 N288_19660 69af9f0299cf4aeec116cc15b087127d 412 Gene3D G3DSA:3.40.50.720 158 411 2.5E-88 T 12-10-2018 N288_15465 42a9cacfe7bdf3c47ff2d3306bc2bfab 254 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 88 2.5E-15 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 N288_15465 42a9cacfe7bdf3c47ff2d3306bc2bfab 254 SUPERFAMILY SSF56784 9 249 6.59E-66 T 12-10-2018 IPR036412 HAD-like superfamily N288_15465 42a9cacfe7bdf3c47ff2d3306bc2bfab 254 Gene3D G3DSA:3.30.1240.10 90 123 5.6E-25 T 12-10-2018 N288_15465 42a9cacfe7bdf3c47ff2d3306bc2bfab 254 ProSitePatterns PS01228 Hypothetical cof family signature 1. 12 23 - T 12-10-2018 N288_15465 42a9cacfe7bdf3c47ff2d3306bc2bfab 254 Gene3D G3DSA:3.30.1240.10 139 173 2.7E-35 T 12-10-2018 N288_15465 42a9cacfe7bdf3c47ff2d3306bc2bfab 254 Pfam PF08282 haloacid dehalogenase-like hydrolase 127 244 3.3E-31 T 12-10-2018 N288_15465 42a9cacfe7bdf3c47ff2d3306bc2bfab 254 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 122 1.7E-22 T 12-10-2018 N288_15465 42a9cacfe7bdf3c47ff2d3306bc2bfab 254 Gene3D G3DSA:3.40.50.1000 174 244 2.7E-35 T 12-10-2018 IPR023214 HAD superfamily N288_15465 42a9cacfe7bdf3c47ff2d3306bc2bfab 254 Gene3D G3DSA:3.40.50.1000 11 89 5.6E-25 T 12-10-2018 IPR023214 HAD superfamily N288_18730 e3ae6f2cee35e02d078c5e874131e93b 88 PIRSF PIRSF037258 1 88 2.2E-46 T 12-10-2018 IPR009309 Uncharacterised protein family UPF0297 N288_18730 e3ae6f2cee35e02d078c5e874131e93b 88 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 83 7.5E-38 T 12-10-2018 IPR009309 Uncharacterised protein family UPF0297 N288_18730 e3ae6f2cee35e02d078c5e874131e93b 88 Hamap MF_01507 UPF0297 protein . 1 85 28.981 T 12-10-2018 IPR009309 Uncharacterised protein family UPF0297 N288_24835 aa238331d61f30172eb0133f085fccbd 202 Pfam PF07007 Lysozyme inhibitor LprI 116 196 1.9E-13 T 12-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal N288_18535 8b162e2d309c778694b2167c710b680b 44 Pfam PF14141 YqzM-like protein 2 43 1.3E-25 T 12-10-2018 IPR025416 YqzM-like protein N288_25985 ee4bb868e546b3643845d46290f24b6a 253 Pfam PF13614 AAA domain 2 178 6.9E-72 T 12-10-2018 IPR025669 AAA domain N288_25985 ee4bb868e546b3643845d46290f24b6a 253 SUPERFAMILY SSF52540 2 251 4.99E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_25985 ee4bb868e546b3643845d46290f24b6a 253 PRINTS PR00091 Nitrogenase component II signature 31 46 7.2E-5 T 12-10-2018 N288_25985 ee4bb868e546b3643845d46290f24b6a 253 PRINTS PR00091 Nitrogenase component II signature 9 22 7.2E-5 T 12-10-2018 N288_25985 ee4bb868e546b3643845d46290f24b6a 253 Gene3D G3DSA:3.40.50.300 1 252 2.0E-83 T 12-10-2018 N288_23685 6717d6c0d69f78fff2b6238b08fdeadc 124 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 19.486 T 12-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 N288_23685 6717d6c0d69f78fff2b6238b08fdeadc 124 Gene3D G3DSA:1.20.58.1610 3 124 2.4E-43 T 12-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23685 6717d6c0d69f78fff2b6238b08fdeadc 124 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 26 123 2.2E-38 T 12-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_11855 94c31b0644ef341ac24a3d2d8e825c8f 331 Gene3D G3DSA:3.40.50.2000 48 142 9.2E-6 T 12-10-2018 N288_11855 94c31b0644ef341ac24a3d2d8e825c8f 331 SUPERFAMILY SSF53756 12 329 1.84E-46 T 12-10-2018 N288_11855 94c31b0644ef341ac24a3d2d8e825c8f 331 Gene3D G3DSA:3.40.50.2000 143 329 4.0E-33 T 12-10-2018 N288_11855 94c31b0644ef341ac24a3d2d8e825c8f 331 Pfam PF00534 Glycosyl transferases group 1 147 304 6.4E-25 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 N288_12320 3b2fef444eed06ece7f9137c97de02db 405 SUPERFAMILY SSF64182 3 304 3.27E-29 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily N288_12320 3b2fef444eed06ece7f9137c97de02db 405 Gene3D G3DSA:3.10.310.30 254 305 3.6E-8 T 12-10-2018 N288_21965 314fafa4850d6ba76b07710ccb66a046 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 402 431 1.1E-17 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 N288_21965 314fafa4850d6ba76b07710ccb66a046 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 373 400 1.1E-17 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 N288_21965 314fafa4850d6ba76b07710ccb66a046 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 13 1.1E-17 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 N288_21965 314fafa4850d6ba76b07710ccb66a046 552 SMART SM00304 191 246 1.0E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_21965 314fafa4850d6ba76b07710ccb66a046 552 SUPERFAMILY SSF58104 222 550 6.8E-63 T 12-10-2018 N288_21965 314fafa4850d6ba76b07710ccb66a046 552 Gene3D G3DSA:1.10.287.950 190 550 5.5E-60 T 12-10-2018 N288_21965 314fafa4850d6ba76b07710ccb66a046 552 SMART SM00283 275 536 1.5E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_21965 314fafa4850d6ba76b07710ccb66a046 552 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 353 504 1.0E-33 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_24290 ad85a77b700a315122c4ad0c8393400d 301 Gene3D G3DSA:3.50.50.60 4 289 1.5E-77 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_24290 ad85a77b700a315122c4ad0c8393400d 301 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 9.4E-15 T 12-10-2018 N288_24290 ad85a77b700a315122c4ad0c8393400d 301 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 9.4E-15 T 12-10-2018 N288_24290 ad85a77b700a315122c4ad0c8393400d 301 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 9.4E-15 T 12-10-2018 N288_24290 ad85a77b700a315122c4ad0c8393400d 301 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 249 271 9.4E-15 T 12-10-2018 N288_24290 ad85a77b700a315122c4ad0c8393400d 301 SUPERFAMILY SSF51905 1 295 1.08E-35 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_24290 ad85a77b700a315122c4ad0c8393400d 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 4.0E-19 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_24290 ad85a77b700a315122c4ad0c8393400d 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 259 277 4.0E-19 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_24290 ad85a77b700a315122c4ad0c8393400d 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 124 136 4.0E-19 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_24290 ad85a77b700a315122c4ad0c8393400d 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 56 66 4.0E-19 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_24290 ad85a77b700a315122c4ad0c8393400d 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 139 163 4.0E-19 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_24290 ad85a77b700a315122c4ad0c8393400d 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 102 110 4.0E-19 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 N288_24290 ad85a77b700a315122c4ad0c8393400d 301 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 284 1.8E-31 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 N288_24290 ad85a77b700a315122c4ad0c8393400d 301 Gene3D G3DSA:3.50.50.60 115 226 1.5E-77 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_07015 72b75aae19b50e9ae2da641515b120f4 719 SUPERFAMILY SSF58104 173 410 3.66E-7 T 12-10-2018 N288_07015 72b75aae19b50e9ae2da641515b120f4 719 Pfam PF12698 ABC-2 family transporter protein 23 165 1.8E-12 T 12-10-2018 N288_07015 72b75aae19b50e9ae2da641515b120f4 719 Pfam PF12698 ABC-2 family transporter protein 507 701 5.1E-13 T 12-10-2018 N288_07015 72b75aae19b50e9ae2da641515b120f4 719 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 433 460 2.3E-4 T 12-10-2018 IPR023908 xxxLxxG heptad repeat N288_07015 72b75aae19b50e9ae2da641515b120f4 719 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 440 467 6.5E-6 T 12-10-2018 IPR023908 xxxLxxG heptad repeat N288_07015 72b75aae19b50e9ae2da641515b120f4 719 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 430 453 2.7E-4 T 12-10-2018 IPR023908 xxxLxxG heptad repeat N288_07015 72b75aae19b50e9ae2da641515b120f4 719 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 350 376 3.5E-5 T 12-10-2018 IPR023908 xxxLxxG heptad repeat N288_07015 72b75aae19b50e9ae2da641515b120f4 719 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 507 710 9.0E-67 T 12-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal N288_07015 72b75aae19b50e9ae2da641515b120f4 719 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 9 171 5.1E-61 T 12-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal N288_21890 1cc10e84c3486f098474b6e7912cdc09 345 Gene3D G3DSA:3.30.1380.20 36 172 6.4E-6 T 12-10-2018 N288_21890 1cc10e84c3486f098474b6e7912cdc09 345 SUPERFAMILY SSF52091 220 328 9.61E-10 T 12-10-2018 IPR036513 STAS domain superfamily N288_21890 1cc10e84c3486f098474b6e7912cdc09 345 Gene3D G3DSA:3.30.750.24 217 335 8.4E-27 T 12-10-2018 IPR036513 STAS domain superfamily N288_21890 1cc10e84c3486f098474b6e7912cdc09 345 SUPERFAMILY SSF111126 48 151 3.03E-5 T 12-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily N288_22955 17beff3bd5a9226654e01c3cde32fca7 340 Gene3D G3DSA:3.40.50.2300 64 326 1.4E-77 T 12-10-2018 N288_22955 17beff3bd5a9226654e01c3cde32fca7 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 12-10-2018 N288_22955 17beff3bd5a9226654e01c3cde32fca7 340 SUPERFAMILY SSF47413 2 62 1.1E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_22955 17beff3bd5a9226654e01c3cde32fca7 340 SUPERFAMILY SSF53822 63 336 2.36E-70 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_22955 17beff3bd5a9226654e01c3cde32fca7 340 Gene3D G3DSA:3.40.50.2300 162 331 1.4E-77 T 12-10-2018 N288_22955 17beff3bd5a9226654e01c3cde32fca7 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 50 1.8E-16 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_22955 17beff3bd5a9226654e01c3cde32fca7 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 1.2E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_22955 17beff3bd5a9226654e01c3cde32fca7 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 1.2E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_22955 17beff3bd5a9226654e01c3cde32fca7 340 Pfam PF13377 Periplasmic binding protein-like domain 170 334 1.9E-28 T 12-10-2018 N288_22955 17beff3bd5a9226654e01c3cde32fca7 340 Gene3D G3DSA:1.10.260.40 1 61 1.0E-21 T 12-10-2018 N288_22955 17beff3bd5a9226654e01c3cde32fca7 340 SMART SM00354 2 73 8.9E-29 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 N288_16600 b8fe042b25c1afdc991f503b1dfcd247 165 Pfam PF02681 Divergent PAP2 family 2 141 1.2E-43 T 12-10-2018 IPR003832 Protein of unknown function DUF212 N288_15305 6272d859143dab2969bbb04a4d97f0fb 419 Pfam PF07687 Peptidase dimerisation domain 200 295 5.2E-15 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain N288_15305 6272d859143dab2969bbb04a4d97f0fb 419 Gene3D G3DSA:3.30.70.360 199 313 2.3E-66 T 12-10-2018 N288_15305 6272d859143dab2969bbb04a4d97f0fb 419 SUPERFAMILY SSF55031 200 308 2.24E-15 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_15305 6272d859143dab2969bbb04a4d97f0fb 419 Gene3D G3DSA:3.40.630.10 45 379 2.3E-66 T 12-10-2018 N288_15305 6272d859143dab2969bbb04a4d97f0fb 419 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 95 104 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 N288_15305 6272d859143dab2969bbb04a4d97f0fb 419 Pfam PF01546 Peptidase family M20/M25/M40 98 385 6.8E-24 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_15305 6272d859143dab2969bbb04a4d97f0fb 419 SUPERFAMILY SSF53187 36 398 3.55E-47 T 12-10-2018 N288_05235 2c7c50a08f46dd9ad1a487e55980ee4f 237 SUPERFAMILY SSF51905 3 235 2.29E-7 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_07045 9f7f28d66e9012441f0ca5be2f0365aa 258 Gene3D G3DSA:1.10.12.10 200 258 8.3E-25 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal N288_07045 9f7f28d66e9012441f0ca5be2f0365aa 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 N288_07045 9f7f28d66e9012441f0ca5be2f0365aa 258 SUPERFAMILY SSF52096 2 258 4.66E-86 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_07045 9f7f28d66e9012441f0ca5be2f0365aa 258 Gene3D G3DSA:3.90.226.10 1 199 1.2E-71 T 12-10-2018 N288_07045 9f7f28d66e9012441f0ca5be2f0365aa 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 257 1.7E-68 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 N288_00300 8cf59133b287445a7e225b2169cb8002 56 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 13 22 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 N288_00300 8cf59133b287445a7e225b2169cb8002 56 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 11 54 2.0E-4 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 N288_00415 0ae97e437a5fadddf6b55b9e75d7cf37 245 Pfam PF13519 von Willebrand factor type A domain 135 227 1.9E-7 T 12-10-2018 IPR002035 von Willebrand factor, type A N288_00415 0ae97e437a5fadddf6b55b9e75d7cf37 245 Pfam PF00092 von Willebrand factor type A domain 3 73 1.6E-6 T 12-10-2018 IPR002035 von Willebrand factor, type A N288_00415 0ae97e437a5fadddf6b55b9e75d7cf37 245 SUPERFAMILY SSF53300 133 225 6.53E-13 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_00415 0ae97e437a5fadddf6b55b9e75d7cf37 245 SUPERFAMILY SSF53300 4 85 1.63E-8 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_00415 0ae97e437a5fadddf6b55b9e75d7cf37 245 Gene3D G3DSA:3.40.50.410 1 238 4.6E-58 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_05465 156818a32885052edfc61fa97b768e94 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 123 3.8E-9 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_05465 156818a32885052edfc61fa97b768e94 133 Gene3D G3DSA:3.10.180.10 5 129 1.8E-20 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_05465 156818a32885052edfc61fa97b768e94 133 SUPERFAMILY SSF54593 5 127 1.09E-19 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_17650 5cc8bf793988a755c0d9ccd5f8206fa0 374 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 105 143 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 N288_17650 5cc8bf793988a755c0d9ccd5f8206fa0 374 Gene3D G3DSA:3.30.70.360 177 288 2.9E-133 T 12-10-2018 N288_17650 5cc8bf793988a755c0d9ccd5f8206fa0 374 PIRSF PIRSF001123 4 96 0.0037 T 12-10-2018 IPR008007 Peptidase M42 N288_17650 5cc8bf793988a755c0d9ccd5f8206fa0 374 PIRSF PIRSF001123 81 183 8.4E-6 T 12-10-2018 IPR008007 Peptidase M42 N288_17650 5cc8bf793988a755c0d9ccd5f8206fa0 374 PIRSF PIRSF001123 258 374 3.2E-4 T 12-10-2018 IPR008007 Peptidase M42 N288_17650 5cc8bf793988a755c0d9ccd5f8206fa0 374 SUPERFAMILY SSF53187 5 369 3.52E-62 T 12-10-2018 N288_17650 5cc8bf793988a755c0d9ccd5f8206fa0 374 SUPERFAMILY SSF55031 180 285 4.19E-20 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain N288_17650 5cc8bf793988a755c0d9ccd5f8206fa0 374 Gene3D G3DSA:3.40.630.10 14 363 2.9E-133 T 12-10-2018 N288_17650 5cc8bf793988a755c0d9ccd5f8206fa0 374 Pfam PF01546 Peptidase family M20/M25/M40 74 368 1.0E-21 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_17650 5cc8bf793988a755c0d9ccd5f8206fa0 374 Pfam PF07687 Peptidase dimerisation domain 182 274 1.1E-15 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain N288_17650 5cc8bf793988a755c0d9ccd5f8206fa0 374 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 6 367 2.0E-164 T 12-10-2018 IPR010162 Peptidase M20B, peptidase T-like N288_17650 5cc8bf793988a755c0d9ccd5f8206fa0 374 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 72 81 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 N288_15020 76f51850b3774218300e214b16e567ec 294 Pfam PF02585 GlcNAc-PI de-N-acetylase 56 184 5.7E-25 T 12-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 N288_15020 76f51850b3774218300e214b16e567ec 294 Gene3D G3DSA:3.40.50.10320 29 284 2.0E-36 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 N288_15020 76f51850b3774218300e214b16e567ec 294 SUPERFAMILY SSF102588 52 289 6.67E-36 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 N288_21300 10bf671dfa7381fb3c8bb05bdfbb4dbd 169 Pfam PF07552 Spore Coat Protein X and V domain 111 168 1.0E-19 T 12-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 N288_21300 10bf671dfa7381fb3c8bb05bdfbb4dbd 169 Pfam PF07552 Spore Coat Protein X and V domain 49 104 4.9E-18 T 12-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 N288_24060 0453d607cdd5c89d5ca505a0e2796e5b 140 Gene3D G3DSA:1.10.10.2520 8 92 6.2E-11 T 12-10-2018 N288_24060 0453d607cdd5c89d5ca505a0e2796e5b 140 Pfam PF07486 Cell Wall Hydrolase 24 129 4.2E-17 T 12-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 N288_20290 964fed2e164df0168f102151475fd412 80 SUPERFAMILY SSF88697 1 80 5.96E-31 T 12-10-2018 IPR015947 PUA-like superfamily N288_20290 964fed2e164df0168f102151475fd412 80 Gene3D G3DSA:2.40.240.20 1 77 1.6E-33 T 12-10-2018 N288_20290 964fed2e164df0168f102151475fd412 80 Pfam PF10763 Protein of unknown function (DUF2584) 1 80 3.5E-38 T 12-10-2018 IPR019699 Protein of unknown function DUF2584 N288_00625 eb60bd104a41fcfcc778e03137a6a69d 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 36.852 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 N288_00625 eb60bd104a41fcfcc778e03137a6a69d 159 SUPERFAMILY SSF69765 1 157 8.76E-67 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 N288_00625 eb60bd104a41fcfcc778e03137a6a69d 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 1.4E-71 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 N288_00625 eb60bd104a41fcfcc778e03137a6a69d 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 12-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 N288_00625 eb60bd104a41fcfcc778e03137a6a69d 159 Pfam PF02542 YgbB family 2 156 3.3E-65 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 N288_00625 eb60bd104a41fcfcc778e03137a6a69d 159 Gene3D G3DSA:3.30.1330.50 1 159 9.9E-69 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 N288_07730 50958b3a8e02995d757cbcb434179e0d 295 SUPERFAMILY SSF55120 75 294 1.53E-63 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_07730 50958b3a8e02995d757cbcb434179e0d 295 Pfam PF00849 RNA pseudouridylate synthase 91 241 3.0E-26 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_07730 50958b3a8e02995d757cbcb434179e0d 295 Gene3D G3DSA:3.30.2350.10 82 295 2.4E-60 T 12-10-2018 N288_07730 50958b3a8e02995d757cbcb434179e0d 295 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 133 147 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_07730 50958b3a8e02995d757cbcb434179e0d 295 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 295 8.0E-65 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 N288_07660 4b31edfc3bc147064ded8a43ffd2e2e7 222 Hamap MF_01124 Adapter protein MecA [mecA]. 1 221 27.672 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA N288_07660 4b31edfc3bc147064ded8a43ffd2e2e7 222 PIRSF PIRSF029008 1 222 3.6E-77 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA N288_07660 4b31edfc3bc147064ded8a43ffd2e2e7 222 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 214 2.1E-52 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA N288_07660 4b31edfc3bc147064ded8a43ffd2e2e7 222 Gene3D G3DSA:3.30.70.1950 122 222 3.6E-30 T 12-10-2018 IPR038471 MecA, C-terminal domain superfamily N288_25265 8a154dae223c4d3e6cc4687475799702 159 SUPERFAMILY SSF109854 28 156 1.14E-24 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_25265 8a154dae223c4d3e6cc4687475799702 159 Pfam PF12867 DinB superfamily 28 146 5.5E-11 T 12-10-2018 IPR024775 DinB-like domain N288_25265 8a154dae223c4d3e6cc4687475799702 159 Gene3D G3DSA:1.20.120.450 25 154 2.6E-19 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_03585 3213624a34086572552ec7024975baef 610 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 38 439 2.1E-85 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 N288_03585 3213624a34086572552ec7024975baef 610 Pfam PF00474 Sodium:solute symporter family 38 433 8.2E-51 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 N288_03585 3213624a34086572552ec7024975baef 610 Gene3D G3DSA:1.20.1730.10 25 545 3.4E-114 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily N288_19605 cd7173683f7a8754e7ffeab6fbf01fdd 372 Gene3D G3DSA:1.10.230.10 220 318 1.5E-128 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain N288_19605 cd7173683f7a8754e7ffeab6fbf01fdd 372 PRINTS PR00143 Citrate synthase signature 304 320 1.1E-43 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 N288_19605 cd7173683f7a8754e7ffeab6fbf01fdd 372 PRINTS PR00143 Citrate synthase signature 247 267 1.1E-43 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 N288_19605 cd7173683f7a8754e7ffeab6fbf01fdd 372 PRINTS PR00143 Citrate synthase signature 123 136 1.1E-43 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 N288_19605 cd7173683f7a8754e7ffeab6fbf01fdd 372 PRINTS PR00143 Citrate synthase signature 324 338 1.1E-43 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 N288_19605 cd7173683f7a8754e7ffeab6fbf01fdd 372 PRINTS PR00143 Citrate synthase signature 172 187 1.1E-43 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 N288_19605 cd7173683f7a8754e7ffeab6fbf01fdd 372 PRINTS PR00143 Citrate synthase signature 194 222 1.1E-43 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 N288_19605 cd7173683f7a8754e7ffeab6fbf01fdd 372 PIRSF PIRSF001369 1 372 3.4E-158 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type N288_19605 cd7173683f7a8754e7ffeab6fbf01fdd 372 Gene3D G3DSA:1.10.580.10 25 351 1.5E-128 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 N288_19605 cd7173683f7a8754e7ffeab6fbf01fdd 372 ProSitePatterns PS00480 Citrate synthase signature. 254 266 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 N288_19605 cd7173683f7a8754e7ffeab6fbf01fdd 372 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 5 371 7.1E-165 T 12-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 N288_19605 cd7173683f7a8754e7ffeab6fbf01fdd 372 Pfam PF00285 Citrate synthase, C-terminal domain 6 354 1.2E-132 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 N288_19605 cd7173683f7a8754e7ffeab6fbf01fdd 372 SUPERFAMILY SSF48256 2 371 5.1E-137 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 N288_23995 038f233bfb5b047e5c50b0f76793343a 275 Pfam PF01564 Spermine/spermidine synthase domain 58 236 1.3E-69 T 12-10-2018 N288_23995 038f233bfb5b047e5c50b0f76793343a 275 Gene3D G3DSA:3.40.50.150 57 275 2.3E-76 T 12-10-2018 N288_23995 038f233bfb5b047e5c50b0f76793343a 275 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 79 92 - T 12-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 N288_23995 038f233bfb5b047e5c50b0f76793343a 275 TIGRFAM TIGR00417 speE: spermidine synthase 4 269 1.8E-120 T 12-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 N288_23995 038f233bfb5b047e5c50b0f76793343a 275 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 3 275 41.321 T 12-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 N288_23995 038f233bfb5b047e5c50b0f76793343a 275 SUPERFAMILY SSF53335 2 274 1.45E-86 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_23995 038f233bfb5b047e5c50b0f76793343a 275 Gene3D G3DSA:2.30.140.10 2 52 6.9E-24 T 12-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 N288_23995 038f233bfb5b047e5c50b0f76793343a 275 Pfam PF17284 Spermidine synthase tetramerisation domain 3 53 5.1E-18 T 12-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 N288_06440 88e899329c4117fda619af858eeabe2c 247 Gene3D G3DSA:3.30.750.24 133 246 1.2E-18 T 12-10-2018 IPR036513 STAS domain superfamily N288_06440 88e899329c4117fda619af858eeabe2c 247 SUPERFAMILY SSF52091 135 224 4.12E-10 T 12-10-2018 IPR036513 STAS domain superfamily N288_01995 cfab91ad6e13ce17b6ea420bdf2a7229 514 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 15 487 1.1E-127 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 N288_01995 cfab91ad6e13ce17b6ea420bdf2a7229 514 Gene3D G3DSA:1.20.1720.10 15 223 2.1E-38 T 12-10-2018 N288_01995 cfab91ad6e13ce17b6ea420bdf2a7229 514 SUPERFAMILY SSF103473 8 492 2.35E-68 T 12-10-2018 IPR036259 MFS transporter superfamily N288_01995 cfab91ad6e13ce17b6ea420bdf2a7229 514 Pfam PF07690 Major Facilitator Superfamily 19 410 1.9E-51 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_01995 cfab91ad6e13ce17b6ea420bdf2a7229 514 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 1.1E-10 T 12-10-2018 N288_01995 cfab91ad6e13ce17b6ea420bdf2a7229 514 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 1.1E-10 T 12-10-2018 N288_01995 cfab91ad6e13ce17b6ea420bdf2a7229 514 PRINTS PR01036 Tetracycline resistance protein TetB signature 78 100 1.1E-10 T 12-10-2018 N288_01995 cfab91ad6e13ce17b6ea420bdf2a7229 514 PRINTS PR01036 Tetracycline resistance protein TetB signature 303 327 1.1E-10 T 12-10-2018 N288_22890 e231c19db4297452af31d195d2a53d4d 258 SUPERFAMILY SSF100950 16 251 5.98E-56 T 12-10-2018 IPR037171 NagB/RpiA transferase-like N288_22890 e231c19db4297452af31d195d2a53d4d 258 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 21 239 7.7E-19 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 N288_22890 e231c19db4297452af31d195d2a53d4d 258 Gene3D G3DSA:3.40.50.1360 15 252 7.0E-66 T 12-10-2018 N288_05510 b503a25ae75151bdd42b9f6a6b468a14 209 Gene3D G3DSA:3.20.20.400 12 199 3.6E-52 T 12-10-2018 IPR035928 GlpP-like superfamily N288_05510 b503a25ae75151bdd42b9f6a6b468a14 209 SUPERFAMILY SSF110391 20 194 6.54E-47 T 12-10-2018 IPR035928 GlpP-like superfamily N288_05510 b503a25ae75151bdd42b9f6a6b468a14 209 PIRSF PIRSF016897 8 199 1.4E-49 T 12-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 N288_05510 b503a25ae75151bdd42b9f6a6b468a14 209 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 20 193 3.9E-50 T 12-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 N288_06645 6785ea80c7fc94aeea071f0c2b2e53a3 71 ProDom PD056348 YHEE BH1143 1 69 2.0E-18 T 12-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 N288_06645 6785ea80c7fc94aeea071f0c2b2e53a3 71 Pfam PF17277 Family of unknown function (DUF5342) 1 69 2.1E-35 T 12-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 N288_06645 6785ea80c7fc94aeea071f0c2b2e53a3 71 PIRSF PIRSF037692 1 71 7.8E-38 T 12-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 N288_14595 ff6edd911d2923599ed3656537a0e9ea 230 Gene3D G3DSA:3.40.50.2300 1 126 1.3E-39 T 12-10-2018 N288_14595 ff6edd911d2923599ed3656537a0e9ea 230 Pfam PF00072 Response regulator receiver domain 6 115 2.5E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_14595 ff6edd911d2923599ed3656537a0e9ea 230 SUPERFAMILY SSF46894 133 229 5.67E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_14595 ff6edd911d2923599ed3656537a0e9ea 230 SMART SM00862 152 228 3.4E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_14595 ff6edd911d2923599ed3656537a0e9ea 230 Gene3D G3DSA:1.10.10.10 128 230 2.4E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_14595 ff6edd911d2923599ed3656537a0e9ea 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 2.3E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 N288_14595 ff6edd911d2923599ed3656537a0e9ea 230 SUPERFAMILY SSF52172 2 124 4.7E-42 T 12-10-2018 IPR011006 CheY-like superfamily N288_14595 ff6edd911d2923599ed3656537a0e9ea 230 SMART SM00448 4 114 2.2E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_20945 1602eaaeb2a249135ea4c2392e8d0297 230 Pfam PF09986 Uncharacterized protein conserved in bacteria (DUF2225) 7 222 1.4E-72 T 12-10-2018 IPR018708 Protein of unknown function DUF2225 N288_19120 9c154fcb2eea16ac32f2fb417834c9fe 250 Pfam PF05239 PRC-barrel domain 93 155 1.6E-4 T 12-10-2018 IPR027275 PRC-barrel domain N288_19120 9c154fcb2eea16ac32f2fb417834c9fe 250 Pfam PF05239 PRC-barrel domain 4 72 1.1E-6 T 12-10-2018 IPR027275 PRC-barrel domain N288_19120 9c154fcb2eea16ac32f2fb417834c9fe 250 SUPERFAMILY SSF50346 93 152 4.12E-7 T 12-10-2018 IPR011033 PRC-barrel-like superfamily N288_19120 9c154fcb2eea16ac32f2fb417834c9fe 250 SUPERFAMILY SSF50346 3 67 1.67E-8 T 12-10-2018 IPR011033 PRC-barrel-like superfamily N288_06060 8b67d4ff67ceef967a9a994e9045b32c 470 SUPERFAMILY SSF53448 58 374 3.0E-48 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_06060 8b67d4ff67ceef967a9a994e9045b32c 470 Pfam PF13632 Glycosyl transferase family group 2 237 382 6.5E-12 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 N288_06060 8b67d4ff67ceef967a9a994e9045b32c 470 Pfam PF00535 Glycosyl transferase family 2 64 197 4.2E-19 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 N288_06060 8b67d4ff67ceef967a9a994e9045b32c 470 Gene3D G3DSA:3.90.550.10 42 321 1.3E-43 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_05050 1e351c1f8e14c52d75ae6107254febd8 298 SUPERFAMILY SSF51735 1 185 2.66E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_05050 1e351c1f8e14c52d75ae6107254febd8 298 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 184 5.4E-48 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 N288_05050 1e351c1f8e14c52d75ae6107254febd8 298 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 285 6.9E-20 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 N288_05050 1e351c1f8e14c52d75ae6107254febd8 298 Gene3D G3DSA:3.40.50.720 1 189 1.1E-57 T 12-10-2018 N288_05050 1e351c1f8e14c52d75ae6107254febd8 298 Gene3D G3DSA:1.10.1040.10 190 295 1.3E-24 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 N288_05050 1e351c1f8e14c52d75ae6107254febd8 298 PIRSF PIRSF000105 1 296 5.0E-86 T 12-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 N288_05050 1e351c1f8e14c52d75ae6107254febd8 298 SUPERFAMILY SSF48179 187 290 4.85E-20 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_15205 5d6cbdbc9b8b9d0825b0fe7d2e4a5e9b 407 Pfam PF07690 Major Facilitator Superfamily 29 235 9.8E-20 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_15205 5d6cbdbc9b8b9d0825b0fe7d2e4a5e9b 407 SUPERFAMILY SSF103473 10 386 2.22E-39 T 12-10-2018 IPR036259 MFS transporter superfamily N288_15205 5d6cbdbc9b8b9d0825b0fe7d2e4a5e9b 407 Gene3D G3DSA:1.20.1250.20 10 385 6.6E-34 T 12-10-2018 N288_21530 f2137041c774542762902f117e424c69 318 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 13 298 2.0E-104 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 N288_21530 f2137041c774542762902f117e424c69 318 SMART SM00382 27 214 2.8E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_21530 f2137041c774542762902f117e424c69 318 Pfam PF00005 ABC transporter 19 164 2.0E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_21530 f2137041c774542762902f117e424c69 318 SUPERFAMILY SSF52540 1 239 4.26E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_21530 f2137041c774542762902f117e424c69 318 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_21530 f2137041c774542762902f117e424c69 318 Gene3D G3DSA:3.40.50.300 1 290 2.9E-80 T 12-10-2018 N288_11700 60beb5b02a960abd96bc2290a437a433 168 SUPERFAMILY SSF52833 8 160 3.57E-42 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_11700 60beb5b02a960abd96bc2290a437a433 168 Pfam PF00578 AhpC/TSA family 35 149 3.5E-35 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 N288_11700 60beb5b02a960abd96bc2290a437a433 168 Gene3D G3DSA:3.40.30.10 23 168 1.2E-45 T 12-10-2018 N288_11700 60beb5b02a960abd96bc2290a437a433 168 ProSitePatterns PS00194 Thioredoxin family active site. 63 81 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 N288_22185 dbe7c56a8a57256b640316c6737faca1 567 Pfam PF00395 S-layer homology domain 458 498 1.1E-6 T 12-10-2018 IPR001119 S-layer homology domain N288_22185 dbe7c56a8a57256b640316c6737faca1 567 Pfam PF00395 S-layer homology domain 287 326 0.016 T 12-10-2018 IPR001119 S-layer homology domain N288_22185 dbe7c56a8a57256b640316c6737faca1 567 Pfam PF00395 S-layer homology domain 227 266 2.8E-9 T 12-10-2018 IPR001119 S-layer homology domain N288_22185 dbe7c56a8a57256b640316c6737faca1 567 Pfam PF00395 S-layer homology domain 398 439 4.5E-15 T 12-10-2018 IPR001119 S-layer homology domain N288_22185 dbe7c56a8a57256b640316c6737faca1 567 Pfam PF00395 S-layer homology domain 344 385 1.1E-15 T 12-10-2018 IPR001119 S-layer homology domain N288_22185 dbe7c56a8a57256b640316c6737faca1 567 Pfam PF00395 S-layer homology domain 516 558 1.0E-11 T 12-10-2018 IPR001119 S-layer homology domain N288_22185 dbe7c56a8a57256b640316c6737faca1 567 Pfam PF13529 Peptidase_C39 like family 31 191 1.9E-32 T 12-10-2018 IPR039564 Peptidase C39-like N288_22185 dbe7c56a8a57256b640316c6737faca1 567 Gene3D G3DSA:3.90.70.10 27 230 4.3E-72 T 12-10-2018 N288_03575 34db135d8fe00371669c1252710f4b8e 63 Gene3D G3DSA:3.40.30.10 18 63 4.1E-14 T 12-10-2018 N288_03575 34db135d8fe00371669c1252710f4b8e 63 Pfam PF00578 AhpC/TSA family 22 63 1.2E-9 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 N288_03575 34db135d8fe00371669c1252710f4b8e 63 SUPERFAMILY SSF52833 20 63 4.43E-13 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_05165 88e9a7245a94f340291ca44860eeb998 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 307 321 2.6E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_05165 88e9a7245a94f340291ca44860eeb998 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 2.6E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_05165 88e9a7245a94f340291ca44860eeb998 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 373 381 2.6E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_05165 88e9a7245a94f340291ca44860eeb998 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 394 405 2.6E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_05165 88e9a7245a94f340291ca44860eeb998 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 2.6E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_05165 88e9a7245a94f340291ca44860eeb998 478 SUPERFAMILY SSF51445 4 475 5.22E-165 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_05165 88e9a7245a94f340291ca44860eeb998 478 Pfam PF00232 Glycosyl hydrolase family 1 5 475 7.8E-140 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 N288_05165 88e9a7245a94f340291ca44860eeb998 478 Gene3D G3DSA:3.20.20.80 1 478 1.6E-157 T 12-10-2018 N288_05165 88e9a7245a94f340291ca44860eeb998 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site N288_05165 88e9a7245a94f340291ca44860eeb998 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 373 381 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site N288_17580 7e448b04628615b409dd9c099a9583dd 68 Pfam PF14164 YqzH-like protein 1 64 1.0E-28 T 12-10-2018 IPR025546 YqzH-like protein N288_17105 287100c84653e00dc1e38d6a6080dc32 296 Pfam PF14045 YIEGIA protein 8 287 1.9E-128 T 12-10-2018 IPR025918 YIEGIA protein N288_17105 287100c84653e00dc1e38d6a6080dc32 296 ProDom PD128584 YPHB BH1976 TRANSMEMBRANE MEMBRANE SEAA 1 291 3.0E-124 T 12-10-2018 N288_11345 5f77a0449c81b6f1ed4be5069866a6b7 234 Gene3D G3DSA:3.90.550.10 1 232 9.7E-57 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_11345 5f77a0449c81b6f1ed4be5069866a6b7 234 Pfam PF00535 Glycosyl transferase family 2 7 160 7.5E-25 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 N288_11345 5f77a0449c81b6f1ed4be5069866a6b7 234 SUPERFAMILY SSF53448 4 215 6.44E-51 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_07265 0516a690fc5c4aa017764fe67895fde5 395 Pfam PF04235 Protein of unknown function (DUF418) 233 386 8.1E-46 T 12-10-2018 IPR007349 Domain of unknown function DUF418 N288_06555 4414789b49011ea375a46edae03516d9 206 SUPERFAMILY SSF56784 2 204 2.27E-34 T 12-10-2018 IPR036412 HAD-like superfamily N288_06555 4414789b49011ea375a46edae03516d9 206 Gene3D G3DSA:1.10.150.240 15 85 7.2E-31 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 N288_06555 4414789b49011ea375a46edae03516d9 206 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 67 175 9.6E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 N288_06555 4414789b49011ea375a46edae03516d9 206 Gene3D G3DSA:3.40.50.1000 4 193 7.2E-31 T 12-10-2018 IPR023214 HAD superfamily N288_06555 4414789b49011ea375a46edae03516d9 206 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 179 2.8E-25 T 12-10-2018 N288_15430 6e9533657ac9330096c7d60f0392440e 353 SUPERFAMILY SSF53187 1 348 9.43E-69 T 12-10-2018 N288_15430 6e9533657ac9330096c7d60f0392440e 353 Gene3D G3DSA:3.40.630.10 5 337 4.7E-115 T 12-10-2018 N288_15430 6e9533657ac9330096c7d60f0392440e 353 Pfam PF05343 M42 glutamyl aminopeptidase 42 337 4.7E-96 T 12-10-2018 IPR008007 Peptidase M42 N288_15430 6e9533657ac9330096c7d60f0392440e 353 Gene3D G3DSA:2.40.30.40 66 158 4.7E-115 T 12-10-2018 IPR023367 Peptidase M42, domain 2 N288_15430 6e9533657ac9330096c7d60f0392440e 353 SUPERFAMILY SSF101821 67 178 1.68E-24 T 12-10-2018 N288_15430 6e9533657ac9330096c7d60f0392440e 353 PIRSF PIRSF001123 1 352 3.7E-108 T 12-10-2018 IPR008007 Peptidase M42 N288_11190 e3f4080d7036adb54fc4b9292a5e67b8 132 SUPERFAMILY SSF46785 28 131 2.57E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_11190 e3f4080d7036adb54fc4b9292a5e67b8 132 SMART SM00347 16 121 1.3E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_11190 e3f4080d7036adb54fc4b9292a5e67b8 132 Gene3D G3DSA:1.10.10.10 1 132 1.0E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_11190 e3f4080d7036adb54fc4b9292a5e67b8 132 Pfam PF01047 MarR family 31 86 3.3E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_11190 e3f4080d7036adb54fc4b9292a5e67b8 132 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 1.1E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_11190 e3f4080d7036adb54fc4b9292a5e67b8 132 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 1.1E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_11190 e3f4080d7036adb54fc4b9292a5e67b8 132 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 1.1E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_11190 e3f4080d7036adb54fc4b9292a5e67b8 132 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 1.1E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_01955 3d9303fcf08cf922de957ca57ef187af 204 SUPERFAMILY SSF46689 7 84 1.23E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_01955 3d9303fcf08cf922de957ca57ef187af 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.4E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_01955 3d9303fcf08cf922de957ca57ef187af 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.4E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_01955 3d9303fcf08cf922de957ca57ef187af 204 Gene3D G3DSA:1.10.357.10 55 203 1.9E-29 T 12-10-2018 N288_01955 3d9303fcf08cf922de957ca57ef187af 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site N288_01955 3d9303fcf08cf922de957ca57ef187af 204 SUPERFAMILY SSF48498 85 202 4.45E-16 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily N288_01955 3d9303fcf08cf922de957ca57ef187af 204 Gene3D G3DSA:1.10.10.60 2 54 9.1E-23 T 12-10-2018 N288_01955 3d9303fcf08cf922de957ca57ef187af 204 Pfam PF08359 YsiA-like protein, C-terminal region 108 174 2.3E-5 T 12-10-2018 IPR013570 Transcription regulator YsiA, C-terminal N288_01955 3d9303fcf08cf922de957ca57ef187af 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 60 9.3E-17 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_19895 1d3b9ab6e91bc7e998f46180d2f1cd3f 215 Gene3D G3DSA:3.10.580.10 1 142 2.6E-41 T 12-10-2018 N288_19895 1d3b9ab6e91bc7e998f46180d2f1cd3f 215 SMART SM00116 81 128 3.6E-10 T 12-10-2018 IPR000644 CBS domain N288_19895 1d3b9ab6e91bc7e998f46180d2f1cd3f 215 SMART SM00116 10 58 5.0E-13 T 12-10-2018 IPR000644 CBS domain N288_19895 1d3b9ab6e91bc7e998f46180d2f1cd3f 215 Gene3D G3DSA:3.30.70.260 143 201 1.8E-6 T 12-10-2018 N288_19895 1d3b9ab6e91bc7e998f46180d2f1cd3f 215 SUPERFAMILY SSF55021 138 207 1.12E-10 T 12-10-2018 N288_19895 1d3b9ab6e91bc7e998f46180d2f1cd3f 215 Pfam PF00571 CBS domain 3 56 4.0E-14 T 12-10-2018 IPR000644 CBS domain N288_19895 1d3b9ab6e91bc7e998f46180d2f1cd3f 215 Pfam PF00571 CBS domain 75 127 2.3E-8 T 12-10-2018 IPR000644 CBS domain N288_19895 1d3b9ab6e91bc7e998f46180d2f1cd3f 215 SUPERFAMILY SSF54631 1 130 8.72E-32 T 12-10-2018 N288_19895 1d3b9ab6e91bc7e998f46180d2f1cd3f 215 Pfam PF01842 ACT domain 139 201 3.4E-10 T 12-10-2018 IPR002912 ACT domain N288_16375 2900ada2b671e46e08aa4ac382f50fcd 203 Pfam PF02342 TerD domain 1 202 3.6E-79 T 12-10-2018 IPR003325 TerD domain N288_16375 2900ada2b671e46e08aa4ac382f50fcd 203 Gene3D G3DSA:2.60.60.30 19 200 8.8E-66 T 12-10-2018 N288_25160 4fed92dc166e22f4393d43545568769b 222 Gene3D G3DSA:3.40.50.880 1 222 7.7E-32 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_25160 4fed92dc166e22f4393d43545568769b 222 Pfam PF03575 Peptidase family S51 3 211 2.0E-17 T 12-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 N288_25160 4fed92dc166e22f4393d43545568769b 222 SUPERFAMILY SSF52317 4 220 6.87E-11 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like N288_09770 c8551b9ab9c6617fd64e07c4df4807ba 229 Pfam PF04347 Flagellar biosynthesis protein, FliO 89 160 4.0E-11 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 N288_14585 8e36f1bef32f34fd54cd3421a13e363f 171 Pfam PF08281 Sigma-70, region 4 110 161 3.7E-12 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_14585 8e36f1bef32f34fd54cd3421a13e363f 171 Gene3D G3DSA:1.10.1740.10 2 78 9.2E-15 T 12-10-2018 N288_14585 8e36f1bef32f34fd54cd3421a13e363f 171 SUPERFAMILY SSF88659 99 163 3.05E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_14585 8e36f1bef32f34fd54cd3421a13e363f 171 Pfam PF04542 Sigma-70 region 2 10 76 2.7E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_14585 8e36f1bef32f34fd54cd3421a13e363f 171 Gene3D G3DSA:1.10.10.10 88 167 4.9E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_14585 8e36f1bef32f34fd54cd3421a13e363f 171 SUPERFAMILY SSF88946 10 85 6.67E-16 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_14585 8e36f1bef32f34fd54cd3421a13e363f 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 162 1.2E-23 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_11120 e48f6a957e05ff95ce3083364340b6a6 282 Gene3D G3DSA:3.40.630.30 50 280 5.0E-13 T 12-10-2018 N288_11120 e48f6a957e05ff95ce3083364340b6a6 282 Pfam PF08445 FR47-like protein 216 273 2.2E-7 T 12-10-2018 IPR013653 FR47-like GO:0016747 N288_11120 e48f6a957e05ff95ce3083364340b6a6 282 SUPERFAMILY SSF55729 31 274 2.74E-10 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_20185 e7ccc8934ab61cd6832a16d49fed8fbe 323 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 15 314 8.4E-134 T 12-10-2018 IPR005911 Protein YhcC-like GO:0051536 N288_20185 e7ccc8934ab61cd6832a16d49fed8fbe 323 Gene3D G3DSA:3.20.20.70 51 269 1.6E-14 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_20185 e7ccc8934ab61cd6832a16d49fed8fbe 323 Pfam PF04055 Radical SAM superfamily 52 214 5.2E-15 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 N288_20185 e7ccc8934ab61cd6832a16d49fed8fbe 323 SUPERFAMILY SSF102114 10 314 8.5E-55 T 12-10-2018 N288_20185 e7ccc8934ab61cd6832a16d49fed8fbe 323 Pfam PF16199 Radical_SAM C-terminal domain 220 304 3.0E-25 T 12-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 N288_20185 e7ccc8934ab61cd6832a16d49fed8fbe 323 SMART SM00729 32 259 1.7E-41 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 N288_12005 e967e2cd262fe3091e9fd62c864b4f92 330 SUPERFAMILY SSF51679 1 327 4.12E-70 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 N288_12005 e967e2cd262fe3091e9fd62c864b4f92 330 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 3 327 2.1E-119 T 12-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 N288_12005 e967e2cd262fe3091e9fd62c864b4f92 330 Pfam PF00296 Luciferase-like monooxygenase 1 297 1.1E-32 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 N288_12005 e967e2cd262fe3091e9fd62c864b4f92 330 Gene3D G3DSA:3.20.20.30 1 330 6.1E-94 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 N288_23755 f51984e6a7e1e3fb4811a024be411345 209 SUPERFAMILY SSF53271 4 207 8.0E-74 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like N288_23755 f51984e6a7e1e3fb4811a024be411345 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 209 5.9E-93 T 12-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 N288_23755 f51984e6a7e1e3fb4811a024be411345 209 Gene3D G3DSA:3.40.50.2020 1 209 1.6E-83 T 12-10-2018 N288_23755 f51984e6a7e1e3fb4811a024be411345 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 1.9E-75 T 12-10-2018 N288_23755 f51984e6a7e1e3fb4811a024be411345 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 48.794 T 12-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 N288_01530 94e56014577897f44548860a63e522df 118 Pfam PF01740 STAS domain 9 94 5.9E-13 T 12-10-2018 IPR002645 STAS domain N288_01530 94e56014577897f44548860a63e522df 118 SUPERFAMILY SSF52091 3 113 4.51E-20 T 12-10-2018 IPR036513 STAS domain superfamily N288_01530 94e56014577897f44548860a63e522df 118 Gene3D G3DSA:3.30.750.24 1 116 1.5E-32 T 12-10-2018 IPR036513 STAS domain superfamily N288_15740 a8a7fbf807eddb73178c4d6ad8d1a858 374 Pfam PF06081 Aromatic acid exporter family member 1 21 159 4.1E-38 T 12-10-2018 IPR010343 Aromatic acid exporter family member 1 N288_22035 2962f1fca96417499288a620aa5734e1 143 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 140 26.17 T 12-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 N288_22035 2962f1fca96417499288a620aa5734e1 143 Pfam PF02623 FliW protein 19 137 5.4E-40 T 12-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 N288_22035 2962f1fca96417499288a620aa5734e1 143 SUPERFAMILY SSF141457 1 139 1.83E-48 T 12-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily N288_22035 2962f1fca96417499288a620aa5734e1 143 Gene3D G3DSA:2.30.290.10 1 143 1.2E-53 T 12-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily N288_21265 6b6ea832ff132c6768c63afbfad347a3 323 Gene3D G3DSA:3.40.50.1980 151 323 1.6E-66 T 12-10-2018 N288_21265 6b6ea832ff132c6768c63afbfad347a3 323 Gene3D G3DSA:3.40.50.1980 45 150 1.4E-33 T 12-10-2018 N288_21265 6b6ea832ff132c6768c63afbfad347a3 323 Pfam PF01497 Periplasmic binding protein 64 298 6.1E-33 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain N288_21265 6b6ea832ff132c6768c63afbfad347a3 323 SUPERFAMILY SSF53807 47 317 6.48E-67 T 12-10-2018 N288_19315 8f90b37135ecb77c923d42c59bb3f2c0 247 Pfam PF03725 3' exoribonuclease family, domain 2 160 225 4.4E-11 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 N288_19315 8f90b37135ecb77c923d42c59bb3f2c0 247 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 237 1.2E-117 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 N288_19315 8f90b37135ecb77c923d42c59bb3f2c0 247 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 12-10-2018 IPR018336 Ribonuclease PH, conserved site N288_19315 8f90b37135ecb77c923d42c59bb3f2c0 247 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.3E-23 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 N288_19315 8f90b37135ecb77c923d42c59bb3f2c0 247 SUPERFAMILY SSF55666 151 238 1.01E-22 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 N288_19315 8f90b37135ecb77c923d42c59bb3f2c0 247 SUPERFAMILY SSF54211 1 182 1.67E-45 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold N288_19315 8f90b37135ecb77c923d42c59bb3f2c0 247 Hamap MF_00564 Ribonuclease PH [rph]. 11 238 44.387 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 N288_19315 8f90b37135ecb77c923d42c59bb3f2c0 247 Gene3D G3DSA:3.30.230.70 14 243 1.8E-62 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 N288_18650 56acd1858a745604ddfeb869f2ec68a3 86 ProDom PD057834 YRHC TRANSMEMBRANE MEMBRANE 12 78 2.0E-7 T 12-10-2018 IPR025418 YrhC-like protein N288_18650 56acd1858a745604ddfeb869f2ec68a3 86 Pfam PF14143 YrhC-like protein 6 77 8.3E-28 T 12-10-2018 IPR025418 YrhC-like protein N288_16255 55082a59e2caf6b56ebf2fa7ebf9dfd3 164 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 18 137 1.0E-47 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 N288_16255 55082a59e2caf6b56ebf2fa7ebf9dfd3 164 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 17 139 1.1E-53 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 N288_16255 55082a59e2caf6b56ebf2fa7ebf9dfd3 164 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 79 91 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 N288_16255 55082a59e2caf6b56ebf2fa7ebf9dfd3 164 SUPERFAMILY SSF51261 6 162 3.14E-58 T 12-10-2018 IPR011055 Duplicated hybrid motif N288_16255 55082a59e2caf6b56ebf2fa7ebf9dfd3 164 Gene3D G3DSA:2.70.70.10 5 164 6.5E-62 T 12-10-2018 IPR011055 Duplicated hybrid motif N288_14340 0e9204fbc1a43fd26a634a98d71aae49 403 Pfam PF07676 WD40-like Beta Propeller Repeat 45 78 0.16 T 12-10-2018 IPR011659 WD40-like Beta Propeller N288_14340 0e9204fbc1a43fd26a634a98d71aae49 403 SUPERFAMILY SSF82171 41 370 3.66E-27 T 12-10-2018 N288_14340 0e9204fbc1a43fd26a634a98d71aae49 403 Gene3D G3DSA:2.120.10.30 183 402 1.0E-8 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like N288_14340 0e9204fbc1a43fd26a634a98d71aae49 403 Gene3D G3DSA:2.120.10.30 13 172 6.7E-15 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like N288_10360 7e6ac5dc4cae24f8692b31e2422ffa2d 145 Pfam PF10747 Sporulation inhibitor of replication protein SirA 2 140 3.6E-48 T 12-10-2018 IPR019683 Sporulation inhibitor of replication protein SirA N288_10360 7e6ac5dc4cae24f8692b31e2422ffa2d 145 Gene3D G3DSA:3.30.310.250 1 145 1.2E-51 T 12-10-2018 IPR038449 SirA superfamily N288_06590 91ce58868c5f0f1da4d34caff1698559 104 Pfam PF01906 Putative heavy-metal-binding 1 102 3.3E-38 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 N288_06590 91ce58868c5f0f1da4d34caff1698559 104 SUPERFAMILY SSF117782 1 104 4.97E-38 T 12-10-2018 IPR035439 UPF0145 domain superfamily N288_06590 91ce58868c5f0f1da4d34caff1698559 104 Gene3D G3DSA:3.30.110.70 1 104 1.3E-29 T 12-10-2018 N288_06590 91ce58868c5f0f1da4d34caff1698559 104 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 24.763 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 N288_09490 1430a52e677d190583dc62f8ccf007f0 315 Gene3D G3DSA:3.40.366.10 6 286 2.1E-98 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 N288_09490 1430a52e677d190583dc62f8ccf007f0 315 PIRSF PIRSF000446 1 311 3.5E-121 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 N288_09490 1430a52e677d190583dc62f8ccf007f0 315 SUPERFAMILY SSF55048 128 193 8.63E-16 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding N288_09490 1430a52e677d190583dc62f8ccf007f0 315 Gene3D G3DSA:3.30.70.250 126 199 2.1E-98 T 12-10-2018 N288_09490 1430a52e677d190583dc62f8ccf007f0 315 SUPERFAMILY SSF52151 4 310 1.67E-78 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase N288_09490 1430a52e677d190583dc62f8ccf007f0 315 Pfam PF00698 Acyl transferase domain 6 293 1.9E-43 T 12-10-2018 IPR014043 Acyl transferase N288_09490 1430a52e677d190583dc62f8ccf007f0 315 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 290 1.1E-113 T 12-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 N288_09490 1430a52e677d190583dc62f8ccf007f0 315 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 314 6.9E-49 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain N288_08685 a16c7287b9c7865cd9d20180cf693594 243 Pfam PF01925 Sulfite exporter TauE/SafE 6 236 2.7E-33 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 N288_05215 0e0cbf11782bd56d19a655b99948fc34 344 PIRSF PIRSF015753 8 326 8.8E-102 T 12-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 N288_05215 0e0cbf11782bd56d19a655b99948fc34 344 Gene3D G3DSA:3.40.30.130 8 177 3.0E-51 T 12-10-2018 N288_05215 0e0cbf11782bd56d19a655b99948fc34 344 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 272 1.0E-10 T 12-10-2018 N288_05215 0e0cbf11782bd56d19a655b99948fc34 344 SUPERFAMILY SSF52833 44 158 8.95E-5 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_05215 0e0cbf11782bd56d19a655b99948fc34 344 SUPERFAMILY SSF47616 164 295 1.21E-27 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily N288_05215 0e0cbf11782bd56d19a655b99948fc34 344 Gene3D G3DSA:1.20.1050.10 178 342 3.5E-64 T 12-10-2018 N288_05215 0e0cbf11782bd56d19a655b99948fc34 344 Pfam PF13409 Glutathione S-transferase, N-terminal domain 59 157 5.6E-11 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 N288_22470 4c4ff42788aa0329b9f4c64d6a0f2e14 336 Pfam PF02615 Malate/L-lactate dehydrogenase 6 334 2.0E-126 T 12-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 N288_22470 4c4ff42788aa0329b9f4c64d6a0f2e14 336 SUPERFAMILY SSF89733 4 335 1.44E-117 T 12-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 N288_22470 4c4ff42788aa0329b9f4c64d6a0f2e14 336 Gene3D G3DSA:3.30.1370.60 70 308 2.6E-124 T 12-10-2018 N288_22470 4c4ff42788aa0329b9f4c64d6a0f2e14 336 Gene3D G3DSA:1.10.1530.10 13 327 2.6E-124 T 12-10-2018 N288_03820 43a32a77668c4e23d70f4651c295d9d3 273 Pfam PF14167 YfkD-like protein 42 273 9.7E-125 T 12-10-2018 IPR025548 YfkD-like protein N288_16175 f8b8623937053deb7e4d6f3906cacdcc 301 Gene3D G3DSA:3.30.420.40 7 294 3.2E-74 T 12-10-2018 N288_16175 f8b8623937053deb7e4d6f3906cacdcc 301 SUPERFAMILY SSF53067 6 129 1.54E-29 T 12-10-2018 N288_16175 f8b8623937053deb7e4d6f3906cacdcc 301 Pfam PF02541 Ppx/GppA phosphatase family 23 298 3.6E-52 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 N288_16175 f8b8623937053deb7e4d6f3906cacdcc 301 SUPERFAMILY SSF53067 132 299 1.1E-34 T 12-10-2018 N288_16175 f8b8623937053deb7e4d6f3906cacdcc 301 Gene3D G3DSA:3.30.420.150 112 286 3.2E-74 T 12-10-2018 N288_05290 203f295d4b70b1e575f382f04ed6f1b0 451 Pfam PF13786 Domain of unknown function (DUF4179) 39 130 3.6E-13 T 12-10-2018 IPR025436 Domain of unknown function DUF4179 N288_05290 203f295d4b70b1e575f382f04ed6f1b0 451 Gene3D G3DSA:2.60.40.1630 70 220 3.4E-15 T 12-10-2018 N288_12730 afd1d86d577f9bc7284de50f89104d69 283 SUPERFAMILY SSF52091 167 274 9.42E-15 T 12-10-2018 IPR036513 STAS domain superfamily N288_12730 afd1d86d577f9bc7284de50f89104d69 283 Pfam PF01740 STAS domain 168 270 4.3E-12 T 12-10-2018 IPR002645 STAS domain N288_12730 afd1d86d577f9bc7284de50f89104d69 283 Gene3D G3DSA:3.30.750.24 163 279 4.6E-34 T 12-10-2018 IPR036513 STAS domain superfamily N288_21095 6cec7076e27c1b48dea5432889d603a5 100 SUPERFAMILY SSF102891 1 99 2.75E-34 T 12-10-2018 IPR036493 Hypothetical protein YunC superfamily N288_21095 6cec7076e27c1b48dea5432889d603a5 100 Pfam PF08827 Domain of unknown function (DUF1805) 37 99 4.0E-25 T 12-10-2018 IPR014931 Protein of unknown function DUF1805 N288_21095 6cec7076e27c1b48dea5432889d603a5 100 Gene3D G3DSA:3.30.1980.10 1 100 5.9E-25 T 12-10-2018 IPR036493 Hypothetical protein YunC superfamily N288_07055 d9d4230a64a7d896dcdc8d01d16f0792 342 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 279 1.8E-30 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 N288_04675 06e87a7f2fedddf72632637356dcef65 173 Pfam PF14568 SMI1-KNR4 cell-wall 52 163 4.3E-18 T 12-10-2018 N288_04675 06e87a7f2fedddf72632637356dcef65 173 SUPERFAMILY SSF160631 31 172 1.44E-19 T 12-10-2018 N288_04675 06e87a7f2fedddf72632637356dcef65 173 SMART SM00860 47 165 3.7E-6 T 12-10-2018 IPR018958 Knr4/Smi1-like domain N288_04675 06e87a7f2fedddf72632637356dcef65 173 Gene3D G3DSA:3.40.1580.10 35 171 2.9E-16 T 12-10-2018 IPR037883 Knr4/Smi1-like domain superfamily N288_06705 bc2fc6ded259bd3b262617eab2fb55b7 501 TIGRFAM TIGR03994 rSAM_HemZ: coproporphyrinogen dehydrogenase HemZ 92 491 1.7E-148 T 12-10-2018 IPR023995 Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ N288_06705 bc2fc6ded259bd3b262617eab2fb55b7 501 SUPERFAMILY SSF102114 169 483 3.27E-69 T 12-10-2018 N288_06705 bc2fc6ded259bd3b262617eab2fb55b7 501 Gene3D G3DSA:3.80.30.20 124 490 3.5E-68 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe N288_06705 bc2fc6ded259bd3b262617eab2fb55b7 501 Pfam PF04055 Radical SAM superfamily 180 352 9.6E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 N288_06705 bc2fc6ded259bd3b262617eab2fb55b7 501 SMART SM00729 172 396 8.6E-49 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 N288_10595 7ef08fe0444f5b0a465182630f8376bd 154 SUPERFAMILY SSF55811 1 148 7.58E-30 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_10595 7ef08fe0444f5b0a465182630f8376bd 154 PRINTS PR00502 NUDIX hydrolase family signature 56 71 9.3E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_10595 7ef08fe0444f5b0a465182630f8376bd 154 PRINTS PR00502 NUDIX hydrolase family signature 42 56 9.3E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_10595 7ef08fe0444f5b0a465182630f8376bd 154 Gene3D G3DSA:3.90.79.10 1 148 1.8E-35 T 12-10-2018 N288_10595 7ef08fe0444f5b0a465182630f8376bd 154 ProSitePatterns PS00893 Nudix box signature. 47 68 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_10595 7ef08fe0444f5b0a465182630f8376bd 154 Pfam PF00293 NUDIX domain 20 143 3.7E-20 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_19770 8d88b3d11a775c104ec8f81a3280198b 162 TIGRFAM TIGR02874 spore_ytfJ: sporulation protein YtfJ 3 130 2.9E-56 T 12-10-2018 IPR014229 Sporulation protein YtfJ N288_19770 8d88b3d11a775c104ec8f81a3280198b 162 PIRSF PIRSF021377 1 160 1.7E-63 T 12-10-2018 IPR014229 Sporulation protein YtfJ N288_19770 8d88b3d11a775c104ec8f81a3280198b 162 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 31 120 6.9E-29 T 12-10-2018 IPR014229 Sporulation protein YtfJ N288_09005 30476f4ffb7eb0937862c406a009bd31 305 SUPERFAMILY SSF55797 183 298 5.23E-21 T 12-10-2018 IPR035940 CAP superfamily N288_09005 30476f4ffb7eb0937862c406a009bd31 305 Pfam PF14504 CAP-associated N-terminal 18 157 6.0E-51 T 12-10-2018 IPR029410 CAP-associated domain N288_09005 30476f4ffb7eb0937862c406a009bd31 305 Pfam PF00188 Cysteine-rich secretory protein family 192 298 3.8E-16 T 12-10-2018 IPR014044 CAP domain N288_09005 30476f4ffb7eb0937862c406a009bd31 305 Gene3D G3DSA:3.40.33.10 2 302 2.6E-100 T 12-10-2018 IPR035940 CAP superfamily N288_14255 5285234c26f95776baa73c96a64fa01e 184 Gene3D G3DSA:3.40.630.30 4 181 1.9E-41 T 12-10-2018 N288_14255 5285234c26f95776baa73c96a64fa01e 184 SUPERFAMILY SSF55729 7 180 9.87E-40 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_14255 5285234c26f95776baa73c96a64fa01e 184 Pfam PF13302 Acetyltransferase (GNAT) domain 12 159 3.2E-24 T 12-10-2018 IPR000182 GNAT domain N288_16915 2aad17ef6e1b37eebd41ad578353a5b9 378 SUPERFAMILY SSF53756 8 376 2.32E-84 T 12-10-2018 N288_16915 2aad17ef6e1b37eebd41ad578353a5b9 378 Pfam PF13439 Glycosyltransferase Family 4 15 179 3.7E-22 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 N288_16915 2aad17ef6e1b37eebd41ad578353a5b9 378 Gene3D G3DSA:3.40.50.2000 177 358 1.4E-117 T 12-10-2018 N288_16915 2aad17ef6e1b37eebd41ad578353a5b9 378 Pfam PF00534 Glycosyl transferases group 1 190 350 6.2E-41 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 N288_16915 2aad17ef6e1b37eebd41ad578353a5b9 378 Gene3D G3DSA:3.40.50.2000 24 371 1.4E-117 T 12-10-2018 N288_16915 2aad17ef6e1b37eebd41ad578353a5b9 378 TIGRFAM TIGR03999 thiol_BshA: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 5 375 3.8E-177 T 12-10-2018 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA GO:0016757|GO:0071793 N288_03730 06c8550a85752a54568c4b2e3053c2ec 439 SUPERFAMILY SSF51905 2 234 7.13E-16 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_03730 06c8550a85752a54568c4b2e3053c2ec 439 Gene3D G3DSA:3.50.50.60 1 430 3.2E-112 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_03730 06c8550a85752a54568c4b2e3053c2ec 439 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 3 341 2.0E-122 T 12-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase N288_07765 32edce97261b53bdcd72ffa788d86af4 111 Pfam PF07098 Protein of unknown function (DUF1360) 10 106 3.7E-32 T 12-10-2018 IPR010773 Mycobacterium phage PG1, Gp7 N288_20780 8e541fc56b9584edc0d2968f5748f454 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 3.4E-18 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_20780 8e541fc56b9584edc0d2968f5748f454 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 3.4E-18 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_20780 8e541fc56b9584edc0d2968f5748f454 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 3.4E-18 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_20780 8e541fc56b9584edc0d2968f5748f454 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 3.4E-18 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_20780 8e541fc56b9584edc0d2968f5748f454 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 3.4E-18 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_20780 8e541fc56b9584edc0d2968f5748f454 493 Pfam PF00361 Proton-conducting membrane transporter 128 414 2.4E-49 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_09125 402f9e387c28ad725d4e1ca31366b5ec 297 Gene3D G3DSA:3.40.50.720 1 173 1.6E-48 T 12-10-2018 N288_09125 402f9e387c28ad725d4e1ca31366b5ec 297 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 294 1.1E-62 T 12-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 N288_09125 402f9e387c28ad725d4e1ca31366b5ec 297 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 150 2.3E-25 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain N288_09125 402f9e387c28ad725d4e1ca31366b5ec 297 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 176 294 1.5E-27 T 12-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain N288_09125 402f9e387c28ad725d4e1ca31366b5ec 297 SUPERFAMILY SSF48179 178 294 2.31E-23 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 N288_09125 402f9e387c28ad725d4e1ca31366b5ec 297 Gene3D G3DSA:1.10.1040.10 174 296 1.2E-38 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 N288_09125 402f9e387c28ad725d4e1ca31366b5ec 297 SUPERFAMILY SSF51735 1 155 4.19E-22 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_09460 d4bf7bb4dacfdbc80d3f9023f7e0c12a 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 18.67 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_09460 d4bf7bb4dacfdbc80d3f9023f7e0c12a 62 Gene3D G3DSA:2.30.170.40 19 62 2.7E-18 T 12-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09460 d4bf7bb4dacfdbc80d3f9023f7e0c12a 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 3.4E-22 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_09460 d4bf7bb4dacfdbc80d3f9023f7e0c12a 62 Pfam PF00830 Ribosomal L28 family 3 58 3.6E-20 T 12-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09460 d4bf7bb4dacfdbc80d3f9023f7e0c12a 62 SUPERFAMILY SSF143800 1 61 1.43E-22 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_24385 0b355806bfd14233d859ae9927e9c39d 525 SMART SM00448 2 116 3.5E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_24385 0b355806bfd14233d859ae9927e9c39d 525 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 476 518 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 N288_24385 0b355806bfd14233d859ae9927e9c39d 525 Gene3D G3DSA:3.40.50.12740 2 162 7.8E-36 T 12-10-2018 N288_24385 0b355806bfd14233d859ae9927e9c39d 525 SMART SM00342 439 522 4.8E-32 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_24385 0b355806bfd14233d859ae9927e9c39d 525 Gene3D G3DSA:1.10.10.60 473 525 5.6E-21 T 12-10-2018 N288_24385 0b355806bfd14233d859ae9927e9c39d 525 SUPERFAMILY SSF46689 475 524 3.76E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_24385 0b355806bfd14233d859ae9927e9c39d 525 SUPERFAMILY SSF46689 423 473 6.72E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_24385 0b355806bfd14233d859ae9927e9c39d 525 Gene3D G3DSA:1.10.10.60 421 472 1.2E-16 T 12-10-2018 N288_24385 0b355806bfd14233d859ae9927e9c39d 525 Pfam PF00072 Response regulator receiver domain 4 116 4.9E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_24385 0b355806bfd14233d859ae9927e9c39d 525 SUPERFAMILY SSF52172 2 166 2.28E-33 T 12-10-2018 IPR011006 CheY-like superfamily N288_24385 0b355806bfd14233d859ae9927e9c39d 525 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 506 522 1.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 N288_24385 0b355806bfd14233d859ae9927e9c39d 525 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 491 506 1.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 N288_24385 0b355806bfd14233d859ae9927e9c39d 525 Pfam PF12833 Helix-turn-helix domain 446 523 3.2E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_06570 d7d026951fe4bf22c16fe65863534945 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_06570 d7d026951fe4bf22c16fe65863534945 187 SUPERFAMILY SSF88659 113 173 6.35E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_06570 d7d026951fe4bf22c16fe65863534945 187 Gene3D G3DSA:1.10.1740.10 1 115 5.4E-23 T 12-10-2018 N288_06570 d7d026951fe4bf22c16fe65863534945 187 SUPERFAMILY SSF88946 1 95 3.92E-26 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_06570 d7d026951fe4bf22c16fe65863534945 187 Gene3D G3DSA:1.10.10.10 116 176 1.7E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_06570 d7d026951fe4bf22c16fe65863534945 187 Pfam PF08281 Sigma-70, region 4 120 168 4.8E-10 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_06570 d7d026951fe4bf22c16fe65863534945 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 173 1.6E-25 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_06570 d7d026951fe4bf22c16fe65863534945 187 Pfam PF04542 Sigma-70 region 2 24 91 2.3E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_18305 e9126e23281c32e231e0c0a7570d2260 190 Pfam PF14181 YqfQ-like protein 43 190 9.2E-51 T 12-10-2018 IPR025571 YqfQ-like protein N288_19515 45fd200300f02b60cebd47ba5b48057b 288 TIGRFAM TIGR02834 spo_ytxC: putative sporulation protein YtxC 3 266 9.5E-62 T 12-10-2018 IPR014199 Sporulation protein YtxC N288_19515 45fd200300f02b60cebd47ba5b48057b 288 Pfam PF08812 YtxC-like family 53 265 2.0E-56 T 12-10-2018 IPR014199 Sporulation protein YtxC N288_19540 f9bea8b291e41996e04e5f2cb5d10f58 126 Pfam PF02675 S-adenosylmethionine decarboxylase 7 112 1.1E-36 T 12-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 N288_19540 f9bea8b291e41996e04e5f2cb5d10f58 126 SUPERFAMILY SSF56276 2 113 4.32E-40 T 12-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 N288_19540 f9bea8b291e41996e04e5f2cb5d10f58 126 Gene3D G3DSA:3.30.360.110 1 62 1.1E-25 T 12-10-2018 N288_19540 f9bea8b291e41996e04e5f2cb5d10f58 126 Gene3D G3DSA:3.30.160.750 63 125 3.8E-18 T 12-10-2018 N288_19540 f9bea8b291e41996e04e5f2cb5d10f58 126 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 1 116 31.851 T 12-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 N288_19540 f9bea8b291e41996e04e5f2cb5d10f58 126 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 3 112 1.7E-41 T 12-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 N288_25165 b2a5e5b353278beaad95fdd7e1f95011 142 Gene3D G3DSA:3.10.180.10 9 142 3.2E-43 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_25165 b2a5e5b353278beaad95fdd7e1f95011 142 SUPERFAMILY SSF54593 2 136 2.08E-33 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_25165 b2a5e5b353278beaad95fdd7e1f95011 142 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 135 8.2E-9 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_17645 effbe873a03a020c904f1d1b98b8df28 211 Gene3D G3DSA:2.30.30.40 60 184 2.9E-28 T 12-10-2018 N288_17645 effbe873a03a020c904f1d1b98b8df28 211 Gene3D G3DSA:2.40.50.180 77 185 2.9E-28 T 12-10-2018 N288_17645 effbe873a03a020c904f1d1b98b8df28 211 Pfam PF01584 CheW-like domain 59 193 3.3E-28 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 N288_17645 effbe873a03a020c904f1d1b98b8df28 211 SUPERFAMILY SSF50341 58 193 3.4E-28 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 N288_17645 effbe873a03a020c904f1d1b98b8df28 211 SMART SM00260 54 190 4.8E-22 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 N288_22080 0795546662e51f5f9559f95342c14b90 198 Pfam PF00872 Transposase, Mutator family 2 173 1.0E-43 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 N288_12805 9391c9a2b6c6824a11d8a9b8bee6d8ec 225 Gene3D G3DSA:1.10.150.240 18 84 3.0E-63 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 N288_12805 9391c9a2b6c6824a11d8a9b8bee6d8ec 225 Gene3D G3DSA:3.40.50.1000 7 208 3.0E-63 T 12-10-2018 IPR023214 HAD superfamily N288_12805 9391c9a2b6c6824a11d8a9b8bee6d8ec 225 SUPERFAMILY SSF56784 1 214 7.76E-50 T 12-10-2018 IPR036412 HAD-like superfamily N288_12805 9391c9a2b6c6824a11d8a9b8bee6d8ec 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 186 1.1E-28 T 12-10-2018 N288_18700 0f135b94bd0d1b8fbcc7310c6d3cf093 422 Gene3D G3DSA:2.40.30.10 334 422 1.5E-37 T 12-10-2018 N288_18700 0f135b94bd0d1b8fbcc7310c6d3cf093 422 Pfam PF01136 Peptidase family U32 94 323 4.3E-87 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 N288_18700 0f135b94bd0d1b8fbcc7310c6d3cf093 422 ProSitePatterns PS01276 Peptidase family U32 signature. 179 197 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 N288_18700 0f135b94bd0d1b8fbcc7310c6d3cf093 422 Pfam PF16325 Peptidase family U32 C-terminal domain 339 419 1.2E-24 T 12-10-2018 IPR032525 Peptidase family U32, C-terminal N288_09995 882944009ed0de9e173b72adf22ca0e8 81 SUPERFAMILY SSF50346 2 75 1.1E-12 T 12-10-2018 IPR011033 PRC-barrel-like superfamily N288_09995 882944009ed0de9e173b72adf22ca0e8 81 Pfam PF05239 PRC-barrel domain 2 79 1.0E-15 T 12-10-2018 IPR027275 PRC-barrel domain N288_09995 882944009ed0de9e173b72adf22ca0e8 81 Gene3D G3DSA:2.30.30.240 2 78 1.2E-9 T 12-10-2018 N288_09995 882944009ed0de9e173b72adf22ca0e8 81 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 2 76 6.8E-28 T 12-10-2018 IPR014238 Sporulation protein YlmC/YmxH N288_17135 78ad6eeac6fc49dfd901273b82b20169 226 Hamap MF_00238 Cytidylate kinase [cmk]. 5 223 32.359 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 N288_17135 78ad6eeac6fc49dfd901273b82b20169 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 216 4.5E-80 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 N288_17135 78ad6eeac6fc49dfd901273b82b20169 226 Pfam PF02224 Cytidylate kinase 7 219 9.4E-74 T 12-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 N288_17135 78ad6eeac6fc49dfd901273b82b20169 226 SUPERFAMILY SSF52540 4 222 2.37E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_17135 78ad6eeac6fc49dfd901273b82b20169 226 Gene3D G3DSA:3.40.50.300 1 226 3.2E-81 T 12-10-2018 N288_01790 c9be9ad3164c5334cc2d1dce0831fe59 148 Pfam PF07997 Protein of unknown function (DUF1694) 3 118 1.6E-42 T 12-10-2018 IPR012543 Protein of unknown function DUF1694 N288_01790 c9be9ad3164c5334cc2d1dce0831fe59 148 PIRSF PIRSF034303 1 146 2.1E-47 T 12-10-2018 IPR012543 Protein of unknown function DUF1694 N288_01790 c9be9ad3164c5334cc2d1dce0831fe59 148 SUPERFAMILY SSF160515 3 121 1.06E-42 T 12-10-2018 N288_01790 c9be9ad3164c5334cc2d1dce0831fe59 148 Gene3D G3DSA:3.30.1330.30 2 128 3.8E-47 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like N288_03225 fce2bc4d6ea960973b37f4efbc7eac7b 507 SUPERFAMILY SSF50022 416 504 2.36E-24 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 N288_03225 fce2bc4d6ea960973b37f4efbc7eac7b 507 Gene3D G3DSA:3.50.50.60 32 378 6.0E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_03225 fce2bc4d6ea960973b37f4efbc7eac7b 507 Pfam PF00355 Rieske [2Fe-2S] domain 428 504 4.8E-13 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 N288_03225 fce2bc4d6ea960973b37f4efbc7eac7b 507 Gene3D G3DSA:3.30.9.10 125 336 6.0E-49 T 12-10-2018 N288_03225 fce2bc4d6ea960973b37f4efbc7eac7b 507 Gene3D G3DSA:2.102.10.10 407 507 3.4E-24 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 N288_03225 fce2bc4d6ea960973b37f4efbc7eac7b 507 PRINTS PR00162 Rieske 2Fe-2S subunit signature 489 501 6.3E-8 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 N288_03225 fce2bc4d6ea960973b37f4efbc7eac7b 507 PRINTS PR00162 Rieske 2Fe-2S subunit signature 456 467 6.3E-8 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 N288_03225 fce2bc4d6ea960973b37f4efbc7eac7b 507 PRINTS PR00162 Rieske 2Fe-2S subunit signature 477 489 6.3E-8 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 N288_03225 fce2bc4d6ea960973b37f4efbc7eac7b 507 SUPERFAMILY SSF51905 29 384 4.4E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_03225 fce2bc4d6ea960973b37f4efbc7eac7b 507 Pfam PF01266 FAD dependent oxidoreductase 32 374 4.4E-46 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 N288_09720 01246be67149a79e1393f8a77f8d792b 201 SUPERFAMILY SSF158791 90 191 2.88E-7 T 12-10-2018 N288_09720 01246be67149a79e1393f8a77f8d792b 201 Pfam PF03448 MgtE intracellular N domain 137 194 2.2E-6 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain N288_09720 01246be67149a79e1393f8a77f8d792b 201 Gene3D G3DSA:1.25.60.10 118 192 1.0E-5 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily N288_03515 e3b05d8dd753da0a34531f6d36aedc85 482 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 156 181 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site N288_03515 e3b05d8dd753da0a34531f6d36aedc85 482 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 37 432 3.9E-92 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 N288_03515 e3b05d8dd753da0a34531f6d36aedc85 482 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site N288_03515 e3b05d8dd753da0a34531f6d36aedc85 482 Gene3D G3DSA:1.20.1730.10 25 481 1.2E-87 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily N288_03515 e3b05d8dd753da0a34531f6d36aedc85 482 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 469 3.8E-221 T 12-10-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0036376 N288_03515 e3b05d8dd753da0a34531f6d36aedc85 482 Pfam PF00474 Sodium:solute symporter family 37 432 2.5E-100 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 N288_20405 ddc01c059a80604bb5f404721a65a27f 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 267 3.2E-92 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 N288_20405 ddc01c059a80604bb5f404721a65a27f 272 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 5 271 56.861 T 12-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 N288_20405 ddc01c059a80604bb5f404721a65a27f 272 TIGRFAM TIGR01929 menB: naphthoate synthase 11 268 3.3E-133 T 12-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 N288_20405 ddc01c059a80604bb5f404721a65a27f 272 Gene3D G3DSA:3.90.226.10 1 209 5.3E-78 T 12-10-2018 N288_20405 ddc01c059a80604bb5f404721a65a27f 272 SUPERFAMILY SSF52096 5 267 3.13E-80 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_20405 ddc01c059a80604bb5f404721a65a27f 272 Gene3D G3DSA:1.10.12.10 210 260 4.3E-29 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal N288_04305 590b1691f60f0ab017e71f38e65ceada 680 SUPERFAMILY SSF53474 417 675 4.1E-47 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_04305 590b1691f60f0ab017e71f38e65ceada 680 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 4 403 5.0E-108 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 N288_04305 590b1691f60f0ab017e71f38e65ceada 680 SUPERFAMILY SSF50993 1 411 8.11E-80 T 12-10-2018 N288_04305 590b1691f60f0ab017e71f38e65ceada 680 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 509 539 - T 12-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 N288_04305 590b1691f60f0ab017e71f38e65ceada 680 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 532 552 1.7E-53 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 N288_04305 590b1691f60f0ab017e71f38e65ceada 680 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 448 466 1.7E-53 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 N288_04305 590b1691f60f0ab017e71f38e65ceada 680 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 474 498 1.7E-53 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 N288_04305 590b1691f60f0ab017e71f38e65ceada 680 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 502 521 1.7E-53 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 N288_04305 590b1691f60f0ab017e71f38e65ceada 680 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 608 630 1.7E-53 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 N288_04305 590b1691f60f0ab017e71f38e65ceada 680 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 590 605 1.7E-53 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 N288_04305 590b1691f60f0ab017e71f38e65ceada 680 Gene3D G3DSA:3.40.50.1820 22 674 5.1E-244 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_04305 590b1691f60f0ab017e71f38e65ceada 680 Pfam PF00326 Prolyl oligopeptidase family 464 678 1.8E-65 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 N288_04305 590b1691f60f0ab017e71f38e65ceada 680 Gene3D G3DSA:2.130.10.120 71 406 5.1E-244 T 12-10-2018 N288_19845 50852a43c6a0df5a5c8fe8fc68105380 159 Pfam PF13185 GAF domain 53 153 2.1E-11 T 12-10-2018 IPR003018 GAF domain GO:0005515 N288_19845 50852a43c6a0df5a5c8fe8fc68105380 159 SMART SM00065 31 158 0.0062 T 12-10-2018 IPR003018 GAF domain GO:0005515 N288_19845 50852a43c6a0df5a5c8fe8fc68105380 159 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 98 115 - T 12-10-2018 IPR000614 Free Met sulfoxide reductase conserved site N288_19845 50852a43c6a0df5a5c8fe8fc68105380 159 Gene3D G3DSA:3.30.450.40 3 159 1.3E-65 T 12-10-2018 IPR029016 GAF-like domain superfamily N288_19845 50852a43c6a0df5a5c8fe8fc68105380 159 SUPERFAMILY SSF55781 15 157 1.26E-44 T 12-10-2018 N288_15000 4aa11931d2cc9db1791d8dd57e76553e 271 SMART SM00342 176 259 9.6E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_15000 4aa11931d2cc9db1791d8dd57e76553e 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 213 255 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 N288_15000 4aa11931d2cc9db1791d8dd57e76553e 271 SUPERFAMILY SSF51215 6 147 7.06E-13 T 12-10-2018 IPR037923 Transcription regulator HTH-like N288_15000 4aa11931d2cc9db1791d8dd57e76553e 271 Pfam PF02311 AraC-like ligand binding domain 13 138 6.8E-7 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 N288_15000 4aa11931d2cc9db1791d8dd57e76553e 271 Pfam PF12833 Helix-turn-helix domain 183 260 3.7E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 N288_15000 4aa11931d2cc9db1791d8dd57e76553e 271 SUPERFAMILY SSF46689 212 260 6.14E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_15000 4aa11931d2cc9db1791d8dd57e76553e 271 Gene3D G3DSA:1.10.10.60 158 263 4.2E-25 T 12-10-2018 N288_15000 4aa11931d2cc9db1791d8dd57e76553e 271 SUPERFAMILY SSF46689 160 209 1.8E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_04590 38fdafa5a3f303cf84f7e9b0f71a31d8 157 Pfam PF00293 NUDIX domain 11 119 1.1E-15 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_04590 38fdafa5a3f303cf84f7e9b0f71a31d8 157 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_04590 38fdafa5a3f303cf84f7e9b0f71a31d8 157 Gene3D G3DSA:3.90.79.10 9 147 8.2E-30 T 12-10-2018 N288_04590 38fdafa5a3f303cf84f7e9b0f71a31d8 157 SUPERFAMILY SSF55811 7 132 1.06E-24 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_11625 f7eda8cdd0db3bf7a716d2324134e079 298 SMART SM00471 128 265 0.0062 T 12-10-2018 IPR003607 HD/PDEase domain N288_11625 f7eda8cdd0db3bf7a716d2324134e079 298 SUPERFAMILY SSF51182 14 110 5.15E-6 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily N288_11625 f7eda8cdd0db3bf7a716d2324134e079 298 Gene3D G3DSA:1.10.3210.10 115 298 1.8E-61 T 12-10-2018 N288_11625 f7eda8cdd0db3bf7a716d2324134e079 298 SUPERFAMILY SSF109604 123 294 8.79E-35 T 12-10-2018 N288_11625 f7eda8cdd0db3bf7a716d2324134e079 298 Pfam PF01966 HD domain 148 256 2.4E-15 T 12-10-2018 IPR006674 HD domain N288_00090 d40f299422b09131026e15ba078f69ee 293 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 3 293 53.831 T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 N288_00090 d40f299422b09131026e15ba078f69ee 293 PIRSF PIRSF029271 1 293 6.6E-152 T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 N288_00090 d40f299422b09131026e15ba078f69ee 293 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 8 293 8.4E-155 T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 N288_00090 d40f299422b09131026e15ba078f69ee 293 Pfam PF01680 SOR/SNZ family 7 211 1.8E-105 T 12-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 N288_00090 d40f299422b09131026e15ba078f69ee 293 SUPERFAMILY SSF51366 17 268 2.73E-71 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 N288_00090 d40f299422b09131026e15ba078f69ee 293 Gene3D G3DSA:3.20.20.70 1 293 1.3E-146 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_00090 d40f299422b09131026e15ba078f69ee 293 ProSitePatterns PS01235 PdxS/SNZ family signature. 204 222 - T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 N288_22970 1bb113d77774710d840f766fbfb0ad91 433 Gene3D G3DSA:3.40.190.10 150 426 1.4E-119 T 12-10-2018 N288_22970 1bb113d77774710d840f766fbfb0ad91 433 SUPERFAMILY SSF53850 19 432 4.35E-71 T 12-10-2018 N288_22970 1bb113d77774710d840f766fbfb0ad91 433 Pfam PF01547 Bacterial extracellular solute-binding protein 47 342 2.0E-32 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein N288_22970 1bb113d77774710d840f766fbfb0ad91 433 Gene3D G3DSA:3.40.190.10 40 380 1.4E-119 T 12-10-2018 N288_06675 7ae6b6a5a152ef071c85972267d82a61 118 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 7 108 1.4E-24 T 12-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA N288_06675 7ae6b6a5a152ef071c85972267d82a61 118 Gene3D G3DSA:1.20.1500.10 2 113 2.9E-38 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily N288_06675 7ae6b6a5a152ef071c85972267d82a61 118 Hamap MF_01526 UPF0342 protein . 2 113 19.253 T 12-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA N288_06675 7ae6b6a5a152ef071c85972267d82a61 118 SUPERFAMILY SSF158622 3 114 8.24E-39 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily N288_10960 7ba50eb58558977cb2548a4a1b61c01d 192 SUPERFAMILY SSF55166 50 173 7.85E-31 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 N288_10960 7ba50eb58558977cb2548a4a1b61c01d 192 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 102 173 1.3E-20 T 12-10-2018 IPR039561 Peptidase M15C GO:0008233 N288_10960 7ba50eb58558977cb2548a4a1b61c01d 192 Gene3D G3DSA:3.30.1380.10 45 172 1.6E-39 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 N288_18010 e7b016c68f30dff375fd107daccefa01 64 Pfam PF14038 YqzE-like protein 2 52 2.8E-29 T 12-10-2018 IPR025622 YqzE-like protein N288_12310 273023073191a342bee055c75aff824c 387 SUPERFAMILY SSF56601 1 274 1.33E-59 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_12310 273023073191a342bee055c75aff824c 387 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 59 70 1.2E-8 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 N288_12310 273023073191a342bee055c75aff824c 387 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 107 124 1.2E-8 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 N288_12310 273023073191a342bee055c75aff824c 387 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 25 254 7.4E-48 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 N288_12310 273023073191a342bee055c75aff824c 387 Gene3D G3DSA:3.40.710.10 11 295 6.0E-81 T 12-10-2018 N288_03760 eed27aa140cd965ec310e75c2b0d96e8 74 Hamap MF_00829 UPF0435 protein . 6 73 20.484 T 12-10-2018 IPR009507 Protein of unknown function UPF0435 N288_03760 eed27aa140cd965ec310e75c2b0d96e8 74 Pfam PF06569 Protein of unknown function (DUF1128) 3 73 5.2E-33 T 12-10-2018 IPR009507 Protein of unknown function UPF0435 N288_15140 066eb95c7ecdebc21389ff0e3d33d760 216 Pfam PF08281 Sigma-70, region 4 161 205 8.3E-8 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_15140 066eb95c7ecdebc21389ff0e3d33d760 216 SUPERFAMILY SSF88946 16 105 4.97E-21 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_15140 066eb95c7ecdebc21389ff0e3d33d760 216 SUPERFAMILY SSF46894 154 206 7.82E-9 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_15140 066eb95c7ecdebc21389ff0e3d33d760 216 Pfam PF04542 Sigma-70 region 2 36 105 8.7E-11 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_15140 066eb95c7ecdebc21389ff0e3d33d760 216 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 32 209 1.2E-23 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_15140 066eb95c7ecdebc21389ff0e3d33d760 216 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 60 73 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 N288_15140 066eb95c7ecdebc21389ff0e3d33d760 216 TIGRFAM TIGR02859 spore_sigH: RNA polymerase sigma-H factor 13 210 1.2E-93 T 12-10-2018 IPR014218 RNA polymerase sigma-H type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_15140 066eb95c7ecdebc21389ff0e3d33d760 216 PIRSF PIRSF002939 2 216 7.0E-93 T 12-10-2018 IPR016371 RNA polymerase sigma-H factor GO:0003677|GO:0006351|GO:0016987 N288_07020 c7c812c782f9c95b8f758565505c7d6a 42 Pfam PF14149 YhfH-like protein 2 38 1.1E-21 T 12-10-2018 IPR025432 YhfH-like protein N288_17560 2cc0c713aa7c15c88d66927f059b8b39 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 15 118 2.1E-26 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 N288_17560 2cc0c713aa7c15c88d66927f059b8b39 122 SUPERFAMILY SSF89360 15 119 2.75E-28 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 N288_17560 2cc0c713aa7c15c88d66927f059b8b39 122 Gene3D G3DSA:2.60.300.12 13 121 1.9E-7 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 N288_04815 c9764ed952aeea49b5d720d495527a03 154 SUPERFAMILY SSF55729 5 147 1.25E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_04815 c9764ed952aeea49b5d720d495527a03 154 Gene3D G3DSA:3.40.630.30 1 153 4.6E-42 T 12-10-2018 N288_04815 c9764ed952aeea49b5d720d495527a03 154 Pfam PF00583 Acetyltransferase (GNAT) family 26 142 1.4E-18 T 12-10-2018 IPR000182 GNAT domain N288_18360 3f03639581e82d8c4054bcc988c568c7 272 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 5 267 60.7 T 12-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein N288_18360 3f03639581e82d8c4054bcc988c568c7 272 Pfam PF03618 Kinase/pyrophosphorylase 7 261 3.1E-98 T 12-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 N288_05670 424a02c7135b787326684a976c07c3cd 65 Pfam PF04259 Small, acid-soluble spore protein, gamma-type 11 63 9.0E-18 T 12-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 N288_05670 424a02c7135b787326684a976c07c3cd 65 TIGRFAM TIGR01442 SASP_gamma: small, acid-soluble spore protein, gamma-type 11 63 1.4E-16 T 12-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 N288_06385 97f6fc959457f3071329e4591b593e75 330 Gene3D G3DSA:3.30.565.10 175 328 1.1E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_06385 97f6fc959457f3071329e4591b593e75 330 Pfam PF14501 GHKL domain 216 327 2.7E-14 T 12-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain N288_06385 97f6fc959457f3071329e4591b593e75 330 SUPERFAMILY SSF55874 185 327 4.02E-10 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_06670 f29997eceb3277502c6e8f7c39152986 352 Pfam PF04286 Protein of unknown function (DUF445) 2 351 9.0E-69 T 12-10-2018 IPR007383 Protein of unknown function DUF445 N288_06670 f29997eceb3277502c6e8f7c39152986 352 PIRSF PIRSF032178 1 352 7.4E-112 T 12-10-2018 IPR016991 Protein of unknown function UCP032178 N288_21380 1ee93fe8dfa50d451ac7a800438408ff 232 Pfam PF13529 Peptidase_C39 like family 41 200 3.5E-35 T 12-10-2018 IPR039564 Peptidase C39-like N288_21380 1ee93fe8dfa50d451ac7a800438408ff 232 Gene3D G3DSA:3.90.70.10 35 232 1.9E-72 T 12-10-2018 N288_21380 1ee93fe8dfa50d451ac7a800438408ff 232 PIRSF PIRSF032442 16 229 3.6E-73 T 12-10-2018 IPR016997 Uncharacterised conserved protein UCP032442 N288_23925 10a83fddaf12116656d1d366390c9af0 1088 Pfam PF03308 ArgK protein 168 405 2.6E-46 T 12-10-2018 N288_23925 10a83fddaf12116656d1d366390c9af0 1088 SUPERFAMILY SSF52540 126 466 2.13E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_23925 10a83fddaf12116656d1d366390c9af0 1088 Gene3D G3DSA:3.40.50.280 8 151 3.4E-60 T 12-10-2018 N288_23925 10a83fddaf12116656d1d366390c9af0 1088 Pfam PF02310 B12 binding domain 14 112 4.2E-11 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 N288_23925 10a83fddaf12116656d1d366390c9af0 1088 Pfam PF01642 Methylmalonyl-CoA mutase 563 1082 7.4E-141 T 12-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 N288_23925 10a83fddaf12116656d1d366390c9af0 1088 Gene3D G3DSA:3.20.20.240 489 1088 6.4E-187 T 12-10-2018 N288_23925 10a83fddaf12116656d1d366390c9af0 1088 SUPERFAMILY SSF51703 507 1084 7.85E-151 T 12-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 N288_23925 10a83fddaf12116656d1d366390c9af0 1088 Gene3D G3DSA:3.40.50.300 201 409 7.4E-62 T 12-10-2018 N288_23925 10a83fddaf12116656d1d366390c9af0 1088 Hamap MF_02050 Fused isobutyryl-CoA mutase [icmF]. 12 1088 17.19 T 12-10-2018 IPR033669 Fused isobutyryl-CoA mutase GO:0003924|GO:0005525|GO:0006637|GO:0031419|GO:0034784|GO:0047727 N288_23925 10a83fddaf12116656d1d366390c9af0 1088 SUPERFAMILY SSF52242 6 144 5.1E-42 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 N288_21270 7ab5597c299b44a3da29d73d7e70633f 499 PIRSF PIRSF005690 4 491 4.5E-150 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 N288_21270 7ab5597c299b44a3da29d73d7e70633f 499 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 40 476 2.6E-158 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 N288_25645 c8b3648d7a4ec60bf39590356d5815e0 243 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 122 5.4E-20 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 N288_25645 c8b3648d7a4ec60bf39590356d5815e0 243 Gene3D G3DSA:1.10.3720.10 5 229 7.9E-59 T 12-10-2018 IPR035906 MetI-like superfamily N288_25645 c8b3648d7a4ec60bf39590356d5815e0 243 SUPERFAMILY SSF161098 14 213 1.02E-45 T 12-10-2018 IPR035906 MetI-like superfamily N288_25645 c8b3648d7a4ec60bf39590356d5815e0 243 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 63 227 2.7E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_08830 01138135d562e8d5be4cf1f082f13cd1 144 Pfam PF08968 Domain of unknown function (DUF1885) 4 141 2.0E-61 T 12-10-2018 IPR015062 Protein of unknown function DUF1885 N288_08830 01138135d562e8d5be4cf1f082f13cd1 144 SUPERFAMILY SSF111171 5 140 8.5E-41 T 12-10-2018 IPR036294 Rbstp2229-like superfamily N288_08830 01138135d562e8d5be4cf1f082f13cd1 144 Gene3D G3DSA:3.30.310.120 51 143 2.0E-28 T 12-10-2018 N288_08830 01138135d562e8d5be4cf1f082f13cd1 144 Gene3D G3DSA:1.20.5.850 6 50 4.0E-21 T 12-10-2018 N288_12555 0bb1844b755f4cadfe5bd5c55f8d1ef0 192 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 7 185 1.8E-38 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT N288_13945 c70dd95e54c471625ad391d8b2e2fcd7 138 Gene3D G3DSA:1.10.10.10 1 138 2.5E-40 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_13945 c70dd95e54c471625ad391d8b2e2fcd7 138 Pfam PF02082 Transcriptional regulator 2 79 2.2E-20 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type N288_13945 c70dd95e54c471625ad391d8b2e2fcd7 138 SUPERFAMILY SSF46785 2 131 1.36E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_00610 a7e1fbae3222d600cba37017513ccd7f 357 Pfam PF10635 DisA bacterial checkpoint controller linker region 143 279 2.0E-46 T 12-10-2018 IPR018906 DNA integrity scanning, DisA, linker region N288_00610 a7e1fbae3222d600cba37017513ccd7f 357 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 26 137 4.0E-26 T 12-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal N288_00610 a7e1fbae3222d600cba37017513ccd7f 357 SUPERFAMILY SSF47781 284 344 1.3E-11 T 12-10-2018 IPR010994 RuvA domain 2-like N288_00610 a7e1fbae3222d600cba37017513ccd7f 357 SUPERFAMILY SSF143597 18 142 6.41E-28 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily N288_00610 a7e1fbae3222d600cba37017513ccd7f 357 Gene3D G3DSA:1.10.150.20 290 353 1.5E-23 T 12-10-2018 N288_00610 a7e1fbae3222d600cba37017513ccd7f 357 Hamap MF_01438 DNA integrity scanning protein DisA [disA]. 1 354 43.504 T 12-10-2018 IPR023763 DNA integrity scanning protein, DisA N288_00610 a7e1fbae3222d600cba37017513ccd7f 357 Gene3D G3DSA:1.20.1260.110 144 286 6.7E-41 T 12-10-2018 IPR038331 DisA, linker domain superfamily N288_00610 a7e1fbae3222d600cba37017513ccd7f 357 Gene3D G3DSA:3.40.1700.10 8 143 2.6E-55 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily N288_05965 2a3720196c414b20962b689bdcf90aa6 631 PIRSF PIRSF000549 1 631 1.2E-264 T 12-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 N288_05965 2a3720196c414b20962b689bdcf90aa6 631 SUPERFAMILY SSF52540 67 459 8.87E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_05965 2a3720196c414b20962b689bdcf90aa6 631 Pfam PF08298 PrkA AAA domain 22 370 5.4E-152 T 12-10-2018 IPR013153 PrkA AAA domain N288_05965 2a3720196c414b20962b689bdcf90aa6 631 SMART SM00763 21 371 5.9E-196 T 12-10-2018 IPR013153 PrkA AAA domain N288_05965 2a3720196c414b20962b689bdcf90aa6 631 Pfam PF06798 PrkA serine protein kinase C-terminal domain 375 624 1.3E-93 T 12-10-2018 IPR010650 PrkA C-terminal domain N288_13045 cf7228ccccec203a5e9a32151a24bc46 110 SUPERFAMILY SSF102462 3 109 1.92E-29 T 12-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 N288_13045 cf7228ccccec203a5e9a32151a24bc46 110 Gene3D G3DSA:3.40.1490.10 3 110 2.3E-26 T 12-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 N288_13045 cf7228ccccec203a5e9a32151a24bc46 110 Pfam PF01981 Peptidyl-tRNA hydrolase PTH2 5 109 1.2E-23 T 12-10-2018 IPR002833 Peptidyl-tRNA hydrolase, PTH2 GO:0004045 MetaCyc: PWY-6308 N288_06155 f516c06f809ff71c5f3bd65a6b9c95a6 447 PIRSF PIRSF002746 1 447 3.1E-175 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 N288_06155 f516c06f809ff71c5f3bd65a6b9c95a6 447 Pfam PF02447 GntP family permease 5 442 2.8E-163 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 N288_06155 f516c06f809ff71c5f3bd65a6b9c95a6 447 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 6 445 3.1E-154 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 N288_12590 dd1e54c52f960cc40b88fe280ea3eda4 159 Pfam PF14039 YusW-like protein 60 151 1.0E-25 T 12-10-2018 IPR025623 YusW-like protein N288_10390 2fc3f82076f7e8f0a031fb84522a4a44 57 Pfam PF09388 Spo0E like sporulation regulatory protein 7 48 2.9E-15 T 12-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 N288_10390 2fc3f82076f7e8f0a031fb84522a4a44 57 SUPERFAMILY SSF140500 4 54 1.83E-15 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 N288_10390 2fc3f82076f7e8f0a031fb84522a4a44 57 Gene3D G3DSA:1.20.58.990 4 57 1.5E-13 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 N288_03460 7e023dfa26e7de52f5291c1902dfea74 163 Pfam PF00293 NUDIX domain 16 137 8.8E-14 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_03460 7e023dfa26e7de52f5291c1902dfea74 163 Gene3D G3DSA:3.90.79.10 3 156 1.3E-21 T 12-10-2018 N288_03460 7e023dfa26e7de52f5291c1902dfea74 163 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_03460 7e023dfa26e7de52f5291c1902dfea74 163 SUPERFAMILY SSF55811 5 140 2.98E-19 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_18515 31e3d67461f40e4f0007f1cf988a37a6 396 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 104 376 2.0E-70 T 12-10-2018 IPR010897 Sporulation stage II, protein P N288_18515 31e3d67461f40e4f0007f1cf988a37a6 396 SUPERFAMILY SSF53187 256 380 5.02E-6 T 12-10-2018 N288_18515 31e3d67461f40e4f0007f1cf988a37a6 396 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 177 380 7.8E-70 T 12-10-2018 IPR010897 Sporulation stage II, protein P N288_05730 84dabcb6ab6d271c0d34d67f0968f187 431 Pfam PF00202 Aminotransferase class-III 35 402 2.3E-69 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_05730 84dabcb6ab6d271c0d34d67f0968f187 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 428 92.99 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 N288_05730 84dabcb6ab6d271c0d34d67f0968f187 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_05730 84dabcb6ab6d271c0d34d67f0968f187 431 Gene3D G3DSA:3.90.1150.10 9 423 3.7E-169 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_05730 84dabcb6ab6d271c0d34d67f0968f187 431 SUPERFAMILY SSF53383 1 425 1.09E-123 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_05730 84dabcb6ab6d271c0d34d67f0968f187 431 Gene3D G3DSA:3.40.640.10 72 320 3.7E-169 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_05730 84dabcb6ab6d271c0d34d67f0968f187 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 1.0E-168 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 N288_23820 c844a285afaffa9ce66624782baecee5 146 Gene3D G3DSA:3.40.630.30 4 136 3.2E-7 T 12-10-2018 N288_23820 c844a285afaffa9ce66624782baecee5 146 SUPERFAMILY SSF55729 1 116 2.29E-5 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_06230 85db8cce17f60ae67a0293af6d9000bb 372 SUPERFAMILY SSF55874 248 371 3.46E-12 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_06230 85db8cce17f60ae67a0293af6d9000bb 372 Pfam PF13185 GAF domain 24 166 6.3E-16 T 12-10-2018 IPR003018 GAF domain GO:0005515 N288_06230 85db8cce17f60ae67a0293af6d9000bb 372 Gene3D G3DSA:3.30.450.40 2 179 3.2E-19 T 12-10-2018 IPR029016 GAF-like domain superfamily N288_06230 85db8cce17f60ae67a0293af6d9000bb 372 Pfam PF07730 Histidine kinase 183 247 5.9E-17 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 N288_06230 85db8cce17f60ae67a0293af6d9000bb 372 Gene3D G3DSA:3.30.565.10 242 372 1.5E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_06230 85db8cce17f60ae67a0293af6d9000bb 372 SUPERFAMILY SSF55781 25 179 2.14E-18 T 12-10-2018 N288_18275 bf428a56584fc0bfef592f66a7499036 137 SUPERFAMILY SSF46785 5 134 2.11E-34 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_18275 bf428a56584fc0bfef592f66a7499036 137 Pfam PF01475 Ferric uptake regulator family 12 129 3.1E-29 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 N288_18275 bf428a56584fc0bfef592f66a7499036 137 Gene3D G3DSA:3.30.1490.190 85 137 1.4E-13 T 12-10-2018 N288_18275 bf428a56584fc0bfef592f66a7499036 137 Gene3D G3DSA:1.10.10.10 1 83 2.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_21175 179c42660bb2e8ed97f7ac105ac73a4f 103 SUPERFAMILY SSF52833 10 100 2.89E-15 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_21175 179c42660bb2e8ed97f7ac105ac73a4f 103 Gene3D G3DSA:3.40.30.10 5 101 3.6E-13 T 12-10-2018 N288_21175 179c42660bb2e8ed97f7ac105ac73a4f 103 Pfam PF00085 Thioredoxin 14 85 2.7E-8 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 N288_11835 14fe1055ed2b0f83ad8a3462ff722c81 156 Gene3D G3DSA:3.40.140.10 2 156 1.2E-62 T 12-10-2018 N288_11835 14fe1055ed2b0f83ad8a3462ff722c81 156 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 101 7.1E-24 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain N288_11835 14fe1055ed2b0f83ad8a3462ff722c81 156 SUPERFAMILY SSF53927 4 147 1.1E-46 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 N288_11835 14fe1055ed2b0f83ad8a3462ff722c81 156 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 N288_02690 31a1504c5600a8664f9d76766ecfe6e2 89 Pfam PF08858 IDEAL domain 63 83 3.0E-7 T 12-10-2018 IPR014957 IDEAL domain N288_03835 13b2e32279667de48122f21345553a45 161 Pfam PF00583 Acetyltransferase (GNAT) family 52 142 2.4E-5 T 12-10-2018 IPR000182 GNAT domain N288_03835 13b2e32279667de48122f21345553a45 161 SUPERFAMILY SSF55729 1 149 1.8E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_03835 13b2e32279667de48122f21345553a45 161 Gene3D G3DSA:3.40.630.30 1 157 3.6E-33 T 12-10-2018 N288_19025 d93db1aaf954f2b445b690ab37118ce2 267 SUPERFAMILY SSF52540 5 262 2.42E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_19025 d93db1aaf954f2b445b690ab37118ce2 267 PIRSF PIRSF003092 1 267 1.1E-97 T 12-10-2018 IPR025501 ATP binding protein MinD N288_19025 d93db1aaf954f2b445b690ab37118ce2 267 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 264 1.0E-126 T 12-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 N288_19025 d93db1aaf954f2b445b690ab37118ce2 267 Pfam PF13614 AAA domain 4 169 1.7E-26 T 12-10-2018 IPR025669 AAA domain N288_19025 d93db1aaf954f2b445b690ab37118ce2 267 Gene3D G3DSA:3.40.50.300 3 255 4.7E-72 T 12-10-2018 N288_24995 e80b0990e81ee2beea39b3198be3c615 282 SUPERFAMILY SSF63829 21 188 1.18E-5 T 12-10-2018 N288_19810 52aa2a02cbb9416a4de3c2aba93775d1 67 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 62 2.6E-23 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 N288_19810 52aa2a02cbb9416a4de3c2aba93775d1 67 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 N288_19810 52aa2a02cbb9416a4de3c2aba93775d1 67 Gene3D G3DSA:1.10.8.910 8 67 9.2E-31 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily N288_19810 52aa2a02cbb9416a4de3c2aba93775d1 67 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 N288_06100 2dffed7332bad88036567ca6948c7631 433 Pfam PF00860 Permease family 14 394 5.8E-64 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 N288_06100 2dffed7332bad88036567ca6948c7631 433 PIRSF PIRSF005353 1 433 5.6E-169 T 12-10-2018 IPR026033 Purine permease PbuG-like N288_17930 afb0aab550a8ad65f052a7e76401fe4b 171 ProDom PD101610 MEMBRANE YQHR BH2802 TRANSMEMBRANE IG 7 160 3.0E-44 T 12-10-2018 IPR024563 Uncharacterised protein family YqhR N288_17930 afb0aab550a8ad65f052a7e76401fe4b 171 Pfam PF11085 Conserved membrane protein YqhR 3 166 1.2E-77 T 12-10-2018 IPR024563 Uncharacterised protein family YqhR N288_02915 29e4e5182e0e0d069d3dbe0fc8faf60c 412 Pfam PF01391 Collagen triple helix repeat (20 copies) 162 219 5.2E-9 T 12-10-2018 IPR008160 Collagen triple helix repeat N288_02915 29e4e5182e0e0d069d3dbe0fc8faf60c 412 Pfam PF01391 Collagen triple helix repeat (20 copies) 119 174 9.5E-9 T 12-10-2018 IPR008160 Collagen triple helix repeat N288_02915 29e4e5182e0e0d069d3dbe0fc8faf60c 412 Pfam PF01391 Collagen triple helix repeat (20 copies) 210 268 4.6E-9 T 12-10-2018 IPR008160 Collagen triple helix repeat N288_10435 3c43e4dc9e0c71ca494caab5355c4b42 292 SUPERFAMILY SSF161098 73 275 1.77E-7 T 12-10-2018 IPR035906 MetI-like superfamily N288_02860 f90eeb1cdc3e47eab94d5b59068287a3 295 Gene3D G3DSA:3.40.50.1820 8 291 5.2E-69 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_02860 f90eeb1cdc3e47eab94d5b59068287a3 295 Pfam PF07859 alpha/beta hydrolase fold 62 267 7.6E-55 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 N288_02860 f90eeb1cdc3e47eab94d5b59068287a3 295 SUPERFAMILY SSF53474 45 287 5.16E-54 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_04610 e43940567ec5e50bb413c404518d2bc8 153 Pfam PF07833 Copper amine oxidase N-terminal domain 62 136 1.9E-4 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal N288_04610 e43940567ec5e50bb413c404518d2bc8 153 SUPERFAMILY SSF55383 29 85 2.22E-6 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily N288_16215 a9e6b32f2091c07564f45ac3669df8dd 230 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 20 35 - T 12-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 N288_16215 a9e6b32f2091c07564f45ac3669df8dd 230 SMART SM00882 8 220 1.6E-77 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 N288_16215 a9e6b32f2091c07564f45ac3669df8dd 230 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 8 220 1.6E-66 T 12-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 N288_16215 a9e6b32f2091c07564f45ac3669df8dd 230 SUPERFAMILY SSF100950 6 222 3.98E-74 T 12-10-2018 IPR037171 NagB/RpiA transferase-like N288_16215 a9e6b32f2091c07564f45ac3669df8dd 230 Gene3D G3DSA:3.40.1080.10 3 224 1.0E-75 T 12-10-2018 N288_16215 a9e6b32f2091c07564f45ac3669df8dd 230 Pfam PF01144 Coenzyme A transferase 10 218 1.8E-65 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 N288_10365 5fcde4de3c2fc8f5f8876dafecbdac54 71 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 1 39 1.0E-13 T 12-10-2018 IPR005359 Protein with unknown function UPF0154 N288_10365 5fcde4de3c2fc8f5f8876dafecbdac54 71 Pfam PF03672 Uncharacterised protein family (UPF0154) 9 67 8.7E-30 T 12-10-2018 IPR005359 Protein with unknown function UPF0154 N288_24745 1a4765513b5fd768c270aab669f61a2a 484 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 N288_24745 1a4765513b5fd768c270aab669f61a2a 484 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 465 1.7E-219 T 12-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 N288_24745 1a4765513b5fd768c270aab669f61a2a 484 Pfam PF02378 Phosphotransferase system, EIIC 111 409 2.9E-38 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 N288_24745 1a4765513b5fd768c270aab669f61a2a 484 Gene3D G3DSA:3.30.1360.60 1 78 5.0E-25 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 N288_24745 1a4765513b5fd768c270aab669f61a2a 484 SUPERFAMILY SSF55604 8 81 1.7E-21 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 N288_24745 1a4765513b5fd768c270aab669f61a2a 484 Pfam PF00367 phosphotransferase system, EIIB 10 42 2.3E-14 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 N288_24745 1a4765513b5fd768c270aab669f61a2a 484 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 29 106 1.5E-16 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 N288_10460 49664efbe79bc46ddc0da051e4b5f719 354 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 197 349 7.5E-16 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 N288_10460 49664efbe79bc46ddc0da051e4b5f719 354 Gene3D G3DSA:3.30.300.210 228 353 1.6E-7 T 12-10-2018 IPR038501 Spore germination GerAC superfamily N288_10460 49664efbe79bc46ddc0da051e4b5f719 354 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 5 349 4.8E-50 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 N288_24475 c7c4fba08acdf1ca0174d8b46b5b8d24 334 Pfam PF02625 XdhC and CoxI family 14 79 1.8E-15 T 12-10-2018 IPR003777 XdhC- CoxI N288_24475 c7c4fba08acdf1ca0174d8b46b5b8d24 334 Pfam PF13478 XdhC Rossmann domain 191 326 4.0E-30 T 12-10-2018 IPR027051 XdhC Rossmann domain N288_24475 c7c4fba08acdf1ca0174d8b46b5b8d24 334 Gene3D G3DSA:3.40.50.720 190 334 1.6E-48 T 12-10-2018 N288_17540 74037087ce96686e7848a749e0fd98c2 308 Pfam PF00682 HMGL-like 10 281 3.3E-48 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 N288_17540 74037087ce96686e7848a749e0fd98c2 308 Gene3D G3DSA:3.20.20.70 2 299 5.0E-112 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_17540 74037087ce96686e7848a749e0fd98c2 308 SUPERFAMILY SSF51569 4 291 6.04E-70 T 12-10-2018 N288_14395 76a2a19d20f2f367ea22f8a9b6d0bc05 62 Gene3D G3DSA:3.40.50.150 2 62 1.0E-5 T 12-10-2018 N288_12070 d8bd2c4a3911d78aba30f932f9022646 179 SUPERFAMILY SSF52141 5 164 3.6E-37 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 N288_12070 d8bd2c4a3911d78aba30f932f9022646 179 Pfam PF03167 Uracil DNA glycosylase superfamily 8 151 1.3E-21 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 N288_12070 d8bd2c4a3911d78aba30f932f9022646 179 Gene3D G3DSA:3.40.470.10 5 171 7.5E-60 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 N288_06865 4c7d14af1fdc4826510add84d496fa9b 252 Pfam PF00005 ABC transporter 25 168 2.6E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_06865 4c7d14af1fdc4826510add84d496fa9b 252 SMART SM00382 34 219 1.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_06865 4c7d14af1fdc4826510add84d496fa9b 252 Gene3D G3DSA:3.40.50.300 7 251 6.9E-65 T 12-10-2018 N288_06865 4c7d14af1fdc4826510add84d496fa9b 252 SUPERFAMILY SSF52540 9 235 6.07E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_03365 15f24845b1baa9cc1859b6f4b62bae3e 188 Pfam PF04542 Sigma-70 region 2 29 96 7.1E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_03365 15f24845b1baa9cc1859b6f4b62bae3e 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 185 6.9E-28 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 N288_03365 15f24845b1baa9cc1859b6f4b62bae3e 188 SUPERFAMILY SSF88659 118 186 1.08E-12 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like N288_03365 15f24845b1baa9cc1859b6f4b62bae3e 188 Pfam PF08281 Sigma-70, region 4 128 181 7.4E-8 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 N288_03365 15f24845b1baa9cc1859b6f4b62bae3e 188 Gene3D G3DSA:1.10.10.10 98 187 7.6E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_03365 15f24845b1baa9cc1859b6f4b62bae3e 188 Gene3D G3DSA:1.10.1740.10 16 97 1.3E-21 T 12-10-2018 N288_03365 15f24845b1baa9cc1859b6f4b62bae3e 188 SUPERFAMILY SSF88946 21 110 1.77E-23 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_24270 5c51e6b4ac5e0ff2e1de70bb94477988 295 SUPERFAMILY SSF53448 2 275 2.92E-66 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_24270 5c51e6b4ac5e0ff2e1de70bb94477988 295 Pfam PF00483 Nucleotidyl transferase 5 266 7.4E-30 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 N288_24270 5c51e6b4ac5e0ff2e1de70bb94477988 295 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 264 6.3E-107 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 N288_24270 5c51e6b4ac5e0ff2e1de70bb94477988 295 Gene3D G3DSA:3.90.550.10 1 290 2.2E-85 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_15950 328b57db12744a497496265562138f2d 278 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 9 260 7.0E-71 T 12-10-2018 N288_15950 328b57db12744a497496265562138f2d 278 Pfam PF12787 EcsC protein family 10 256 8.3E-76 T 12-10-2018 IPR024787 EcsC protein N288_17130 72f7605d30c3e4a3986c199c2d67888a 193 SMART SM00563 35 147 5.5E-34 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 N288_17130 72f7605d30c3e4a3986c199c2d67888a 193 Pfam PF01553 Acyltransferase 21 144 4.6E-26 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 N288_17130 72f7605d30c3e4a3986c199c2d67888a 193 SUPERFAMILY SSF69593 3 191 3.92E-50 T 12-10-2018 N288_18720 ee75e9332a419a0d0c3d41abbc670fb3 95 Pfam PF06949 Protein of unknown function (DUF1292) 13 89 5.7E-18 T 12-10-2018 IPR009711 Uncharacterised protein family UPF0473 N288_18720 ee75e9332a419a0d0c3d41abbc670fb3 95 Hamap MF_01448 UPF0473 protein . 4 90 21.897 T 12-10-2018 IPR009711 Uncharacterised protein family UPF0473 N288_11260 dbfaff8c0c35fc9abdad4d980bb2932b 318 SUPERFAMILY SSF47240 38 285 8.92E-66 T 12-10-2018 IPR009078 Ferritin-like superfamily N288_11260 dbfaff8c0c35fc9abdad4d980bb2932b 318 Gene3D G3DSA:1.20.1260.10 11 318 7.4E-116 T 12-10-2018 IPR012347 Ferritin-like N288_11260 dbfaff8c0c35fc9abdad4d980bb2932b 318 Pfam PF05138 Phenylacetic acid catabolic protein 28 308 1.2E-82 T 12-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 N288_11260 dbfaff8c0c35fc9abdad4d980bb2932b 318 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 18 312 1.4E-135 T 12-10-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149 N288_17950 2136eec84ebbc560cced427d07d09abf 341 Gene3D G3DSA:3.40.50.12110 2 114 8.3E-47 T 12-10-2018 N288_17950 2136eec84ebbc560cced427d07d09abf 341 Gene3D G3DSA:3.80.30.30 115 341 8.0E-93 T 12-10-2018 N288_17950 2136eec84ebbc560cced427d07d09abf 341 TIGRFAM TIGR04070 photo_TT_lyase: spore photoproduct lyase 4 341 1.5E-156 T 12-10-2018 IPR023897 Spore photoproduct lyase GO:0003913 N288_05555 0269ed653449832ffafce40d40e838cb 885 Pfam PF09586 Bacterial membrane protein YfhO 29 858 1.7E-150 T 12-10-2018 IPR018580 Uncharacterised protein family YfhO N288_10760 b375bcb51321c2f439dc01b79aeca1a9 265 Pfam PF07859 alpha/beta hydrolase fold 43 162 8.3E-12 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 N288_10760 b375bcb51321c2f439dc01b79aeca1a9 265 SUPERFAMILY SSF53474 13 261 3.78E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_10760 b375bcb51321c2f439dc01b79aeca1a9 265 Gene3D G3DSA:3.40.50.1820 21 264 5.6E-63 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_22430 78ce79221153ccea37923c5495099b98 210 SMART SM00934 2 202 4.7E-31 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_22430 78ce79221153ccea37923c5495099b98 210 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 2 197 9.6E-24 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_22430 78ce79221153ccea37923c5495099b98 210 Gene3D G3DSA:3.20.20.70 1 208 8.2E-67 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_22430 78ce79221153ccea37923c5495099b98 210 SUPERFAMILY SSF51366 2 206 3.33E-32 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 N288_00450 96566829cb35043edf6a47f5cacd0a50 296 Gene3D G3DSA:3.10.50.40 154 255 2.4E-31 T 12-10-2018 N288_00450 96566829cb35043edf6a47f5cacd0a50 296 Gene3D G3DSA:1.10.4030.30 48 268 2.4E-31 T 12-10-2018 N288_00450 96566829cb35043edf6a47f5cacd0a50 296 Pfam PF13145 PPIC-type PPIASE domain 134 258 2.9E-20 T 12-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 N288_00450 96566829cb35043edf6a47f5cacd0a50 296 SUPERFAMILY SSF54534 150 247 2.35E-19 T 12-10-2018 N288_00450 96566829cb35043edf6a47f5cacd0a50 296 Pfam PF13624 SurA N-terminal domain 6 119 1.8E-7 T 12-10-2018 N288_00450 96566829cb35043edf6a47f5cacd0a50 296 SUPERFAMILY SSF109998 37 181 9.02E-24 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily N288_21285 3c263f9990cfcc3fccee6e8505cad920 390 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_21285 3c263f9990cfcc3fccee6e8505cad920 390 Pfam PF01098 Cell cycle protein 15 381 5.0E-92 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_00315 7bb3dfb3db7ed0184d2f3890ef5f91b3 124 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 122 1.8E-55 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 N288_00315 7bb3dfb3db7ed0184d2f3890ef5f91b3 124 Pfam PF01042 Endoribonuclease L-PSP 7 122 2.4E-47 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 N288_00315 7bb3dfb3db7ed0184d2f3890ef5f91b3 124 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 99 117 - T 12-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 N288_00315 7bb3dfb3db7ed0184d2f3890ef5f91b3 124 SUPERFAMILY SSF55298 3 123 4.4E-48 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 N288_00315 7bb3dfb3db7ed0184d2f3890ef5f91b3 124 Gene3D G3DSA:3.30.1330.40 1 124 2.9E-55 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 N288_01805 72dcc31c632b9e4b4f64a62d9aecb2ce 162 Pfam PF04294 VanW like protein 5 91 4.0E-21 T 12-10-2018 IPR007391 Vancomycin resistance VanW N288_18705 4384d4849159be8864a346cb9e795c1c 309 Pfam PF01136 Peptidase family U32 75 306 1.3E-65 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 N288_07205 89dd8ebcd655a05dabd4bc5dd28503e7 375 Gene3D G3DSA:1.20.1720.10 9 368 6.5E-44 T 12-10-2018 N288_07205 89dd8ebcd655a05dabd4bc5dd28503e7 375 SUPERFAMILY SSF103473 10 368 1.31E-44 T 12-10-2018 IPR036259 MFS transporter superfamily N288_07205 89dd8ebcd655a05dabd4bc5dd28503e7 375 Pfam PF07690 Major Facilitator Superfamily 13 224 1.0E-28 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_05975 71fa6275427d571d866f4fd2e674a9f1 372 SUPERFAMILY SSF88713 163 354 4.45E-46 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 N288_05975 71fa6275427d571d866f4fd2e674a9f1 372 Pfam PF01522 Polysaccharide deacetylase 164 285 3.1E-24 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 N288_05975 71fa6275427d571d866f4fd2e674a9f1 372 Pfam PF07833 Copper amine oxidase N-terminal domain 54 135 7.3E-6 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal N288_05975 71fa6275427d571d866f4fd2e674a9f1 372 Gene3D G3DSA:3.20.20.370 139 361 1.4E-51 T 12-10-2018 N288_07800 a885b9d52844410a8a606f0852417eaa 43 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 16 42 2.8E-12 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like N288_07800 a885b9d52844410a8a606f0852417eaa 43 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 19 42 2.6E-10 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like N288_13840 d2dde5c57393e8d01a1f4030180f4cea 87 Pfam PF11122 Inner spore coat protein D 16 82 2.4E-15 T 12-10-2018 IPR020108 Spore coat protein CotD N288_14310 b0893bae3c30fe9a004a45cc50fdfcef 674 SUPERFAMILY SSF53649 251 641 4.74E-77 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 N288_14310 b0893bae3c30fe9a004a45cc50fdfcef 674 Gene3D G3DSA:3.40.720.10 244 551 1.7E-78 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 N288_14310 b0893bae3c30fe9a004a45cc50fdfcef 674 Pfam PF00884 Sulfatase 253 541 2.9E-38 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 N288_14310 b0893bae3c30fe9a004a45cc50fdfcef 674 PIRSF PIRSF005091 1 627 1.9E-192 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like N288_24105 714cb5811a0dfed3394c6e0c720f2e8f 76 SUPERFAMILY SSF54285 3 76 2.18E-16 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp N288_24105 714cb5811a0dfed3394c6e0c720f2e8f 76 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 3 76 1.2E-21 T 12-10-2018 N288_24105 714cb5811a0dfed3394c6e0c720f2e8f 76 Gene3D G3DSA:3.10.20.30 1 76 2.6E-21 T 12-10-2018 IPR012675 Beta-grasp domain superfamily N288_24105 714cb5811a0dfed3394c6e0c720f2e8f 76 TIGRFAM TIGR01687 moaD_arch: MoaD family protein 3 76 1.0E-13 T 12-10-2018 IPR010038 MoaD, archaeal-type N288_24105 714cb5811a0dfed3394c6e0c720f2e8f 76 Pfam PF02597 ThiS family 4 76 7.9E-17 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 N288_01030 418546f6aead6f22785a1760b01e6501 298 PIRSF PIRSF036979 1 294 5.2E-37 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 N288_01030 418546f6aead6f22785a1760b01e6501 298 Pfam PF00491 Arginase family 3 293 2.3E-81 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 N288_01030 418546f6aead6f22785a1760b01e6501 298 Gene3D G3DSA:3.40.800.10 1 298 8.5E-117 T 12-10-2018 N288_01030 418546f6aead6f22785a1760b01e6501 298 PRINTS PR00116 Arginase signature 255 269 5.7E-42 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 N288_01030 418546f6aead6f22785a1760b01e6501 298 PRINTS PR00116 Arginase signature 94 109 5.7E-42 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 N288_01030 418546f6aead6f22785a1760b01e6501 298 PRINTS PR00116 Arginase signature 220 249 5.7E-42 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 N288_01030 418546f6aead6f22785a1760b01e6501 298 PRINTS PR00116 Arginase signature 117 144 5.7E-42 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 N288_01030 418546f6aead6f22785a1760b01e6501 298 PRINTS PR00116 Arginase signature 171 189 5.7E-42 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 N288_01030 418546f6aead6f22785a1760b01e6501 298 TIGRFAM TIGR01229 rocF_arginase: arginase 5 298 3.9E-105 T 12-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 N288_01030 418546f6aead6f22785a1760b01e6501 298 ProSitePatterns PS01053 Arginase family signature. 223 244 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 N288_01030 418546f6aead6f22785a1760b01e6501 298 SUPERFAMILY SSF52768 3 295 1.8E-94 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily N288_07065 d8c7e6e970649e8de51ffc245df72a22 183 SUPERFAMILY SSF51182 59 182 7.34E-25 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily N288_07065 d8c7e6e970649e8de51ffc245df72a22 183 Pfam PF01381 Helix-turn-helix 12 64 3.8E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_07065 d8c7e6e970649e8de51ffc245df72a22 183 SUPERFAMILY SSF47413 2 70 2.44E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_07065 d8c7e6e970649e8de51ffc245df72a22 183 SMART SM00530 11 66 1.4E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_07065 d8c7e6e970649e8de51ffc245df72a22 183 Gene3D G3DSA:1.10.260.40 1 83 1.6E-21 T 12-10-2018 N288_07065 d8c7e6e970649e8de51ffc245df72a22 183 Gene3D G3DSA:2.60.120.10 91 183 1.5E-29 T 12-10-2018 IPR014710 RmlC-like jelly roll fold N288_07065 d8c7e6e970649e8de51ffc245df72a22 183 Pfam PF07883 Cupin domain 110 179 3.5E-14 T 12-10-2018 IPR013096 Cupin 2, conserved barrel N288_14975 18af7193748d897c0fa081db4b970f38 301 Gene3D G3DSA:3.30.420.40 6 291 2.1E-59 T 12-10-2018 N288_14975 18af7193748d897c0fa081db4b970f38 301 Gene3D G3DSA:3.30.420.40 126 279 2.1E-59 T 12-10-2018 N288_14975 18af7193748d897c0fa081db4b970f38 301 SUPERFAMILY SSF53067 4 299 1.22E-44 T 12-10-2018 N288_14975 18af7193748d897c0fa081db4b970f38 301 Pfam PF00480 ROK family 6 296 1.4E-40 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 N288_05430 85c66440e3cdd182d17928c475073962 118 SMART SM00418 9 87 3.7E-22 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_05430 85c66440e3cdd182d17928c475073962 118 Gene3D G3DSA:1.10.10.10 4 109 8.1E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_05430 85c66440e3cdd182d17928c475073962 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 6.9E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_05430 85c66440e3cdd182d17928c475073962 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 6.9E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_05430 85c66440e3cdd182d17928c475073962 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 6.9E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_05430 85c66440e3cdd182d17928c475073962 118 Pfam PF12840 Helix-turn-helix domain 9 67 1.3E-13 T 12-10-2018 N288_05430 85c66440e3cdd182d17928c475073962 118 SUPERFAMILY SSF46785 7 96 1.06E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_16105 5b9987d9e7f7f9f425c2d44ddd4d8499 284 Gene3D G3DSA:3.30.1380.10 72 284 1.1E-84 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 N288_16105 5b9987d9e7f7f9f425c2d44ddd4d8499 284 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 133 261 9.8E-46 T 12-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 N288_16105 5b9987d9e7f7f9f425c2d44ddd4d8499 284 SUPERFAMILY SSF55166 126 267 9.68E-38 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 N288_25030 36b9159ca265e0b1f870b0041ee5fa54 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 1.3E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_25030 36b9159ca265e0b1f870b0041ee5fa54 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 202 216 1.3E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_25030 36b9159ca265e0b1f870b0041ee5fa54 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 1.3E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_25030 36b9159ca265e0b1f870b0041ee5fa54 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 40 55 1.3E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_25030 36b9159ca265e0b1f870b0041ee5fa54 263 SUPERFAMILY SSF53474 3 258 4.52E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_25030 36b9159ca265e0b1f870b0041ee5fa54 263 Gene3D G3DSA:3.40.50.1820 1 262 6.9E-55 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_25030 36b9159ca265e0b1f870b0041ee5fa54 263 Pfam PF12146 Serine aminopeptidase, S33 14 244 1.1E-13 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 N288_16870 aee8b06bd0df8e12a61cefaaf904b0b4 282 Gene3D G3DSA:3.60.15.10 37 277 4.2E-16 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_16870 aee8b06bd0df8e12a61cefaaf904b0b4 282 SUPERFAMILY SSF56281 39 275 3.65E-5 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_21900 89a6da58733f46d29f3db9f4f09741d9 297 Pfam PF02687 FtsX-like permease family 200 288 1.1E-6 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 N288_21900 89a6da58733f46d29f3db9f4f09741d9 297 PIRSF PIRSF003097 1 297 7.0E-88 T 12-10-2018 IPR004513 Cell division protein FtsX GO:0016021 N288_21900 89a6da58733f46d29f3db9f4f09741d9 297 Gene3D G3DSA:3.30.70.3040 49 153 4.6E-5 T 12-10-2018 N288_04025 b29a5b7a45389c1a69f2021ab303d54e 236 SUPERFAMILY SSF52980 14 234 2.63E-21 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 N288_04025 b29a5b7a45389c1a69f2021ab303d54e 236 Gene3D G3DSA:3.40.600.10 8 236 9.1E-40 T 12-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 N288_08220 4acdcb594e887eb7c56d80bc6934008b 148 Pfam PF06803 Protein of unknown function (DUF1232) 79 113 2.0E-11 T 12-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 N288_03615 fec7ca50799ffc21ba8ba9749343fff2 391 Pfam PF00872 Transposase, Mutator family 11 366 5.4E-100 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 N288_19500 b70a259c1fbb01b7adebc9a494f385cd 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 2.9E-26 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 N288_19500 b70a259c1fbb01b7adebc9a494f385cd 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 19.103 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 N288_19500 b70a259c1fbb01b7adebc9a494f385cd 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.1E-23 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 N288_19500 b70a259c1fbb01b7adebc9a494f385cd 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.1E-23 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 N288_19500 b70a259c1fbb01b7adebc9a494f385cd 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.1E-23 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 N288_19500 b70a259c1fbb01b7adebc9a494f385cd 66 SUPERFAMILY SSF143034 2 62 3.79E-22 T 12-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_19500 b70a259c1fbb01b7adebc9a494f385cd 66 Gene3D G3DSA:2.40.50.530 1 63 7.0E-22 T 12-10-2018 N288_19500 b70a259c1fbb01b7adebc9a494f385cd 66 Pfam PF01632 Ribosomal protein L35 2 62 7.5E-26 T 12-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_08850 3c42d6abebb9caffe094cfd7e1d64bf6 90 Gene3D G3DSA:1.10.220.80 12 90 7.8E-30 T 12-10-2018 IPR023324 BH2638-like superfamily N288_08850 3c42d6abebb9caffe094cfd7e1d64bf6 90 SUPERFAMILY SSF158504 4 83 2.88E-34 T 12-10-2018 IPR023324 BH2638-like superfamily N288_08850 3c42d6abebb9caffe094cfd7e1d64bf6 90 PIRSF PIRSF037260 1 90 1.4E-38 T 12-10-2018 IPR007920 Protein of unknown function UPF0223 N288_08850 3c42d6abebb9caffe094cfd7e1d64bf6 90 Hamap MF_01041 UPF0223 protein . 1 89 25.922 T 12-10-2018 IPR007920 Protein of unknown function UPF0223 N288_08850 3c42d6abebb9caffe094cfd7e1d64bf6 90 ProDom PD062738 UPF0223 FAMILY UNCHARACTERISED CYTOSOLIC SUPERFAMILY YKTA LMO1058/LIN1050 INOSITOL MW0980 M6_SPY0948 3 89 7.0E-30 T 12-10-2018 IPR007920 Protein of unknown function UPF0223 N288_08850 3c42d6abebb9caffe094cfd7e1d64bf6 90 Pfam PF05256 Uncharacterised protein family (UPF0223) 2 84 4.7E-39 T 12-10-2018 IPR007920 Protein of unknown function UPF0223 N288_14120 d0d2e3d0ba90d0857caea8887bd3f849 156 Pfam PF13527 Acetyltransferase (GNAT) domain 29 145 8.3E-15 T 12-10-2018 N288_14120 d0d2e3d0ba90d0857caea8887bd3f849 156 SUPERFAMILY SSF55729 1 152 1.25E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_14120 d0d2e3d0ba90d0857caea8887bd3f849 156 Gene3D G3DSA:3.40.630.30 1 153 1.3E-32 T 12-10-2018 N288_14140 df7ed66ae4d918fd2a1a943211dc9b92 125 Pfam PF13789 Domain of unknown function (DUF4181) 16 119 8.8E-22 T 12-10-2018 IPR025441 Protein of unknown function DUF4181 N288_20000 4c42b5188db08b9ad9462b324dc47249 174 Pfam PF01931 Protein of unknown function DUF84 6 158 1.1E-47 T 12-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 N288_20000 4c42b5188db08b9ad9462b324dc47249 174 Hamap MF_00648 Non-canonical purine NTP phosphatase. 1 170 27.165 T 12-10-2018 IPR002786 Non-canonical purine NTP phosphatase N288_20000 4c42b5188db08b9ad9462b324dc47249 174 SUPERFAMILY SSF52972 1 165 1.53E-48 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like N288_20000 4c42b5188db08b9ad9462b324dc47249 174 Gene3D G3DSA:3.90.950.10 1 173 2.5E-55 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like N288_23370 b9f5079e4f1e077ea732e1932e939ee7 487 Pfam PF04932 O-Antigen ligase 242 418 8.0E-31 T 12-10-2018 IPR007016 O-antigen ligase-related N288_18425 7ca4838c56ba579cd0cced61310bd654 94 Pfam PF07873 YabP family 28 91 3.1E-18 T 12-10-2018 IPR022476 Sporulation protein YabP/YqfC N288_18425 7ca4838c56ba579cd0cced61310bd654 94 TIGRFAM TIGR02856 spore_yqfC: sporulation protein YqfC 9 92 4.7E-37 T 12-10-2018 IPR022477 Sporulation protein YqfC N288_02380 1855e1ee6122d9378229fb3432dbb488 207 Gene3D G3DSA:3.40.50.1820 5 198 2.1E-8 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_02380 1855e1ee6122d9378229fb3432dbb488 207 PIRSF PIRSF033634 1 206 2.0E-39 T 12-10-2018 IPR017018 Uncharacterised conserved protein UCP033634 N288_02380 1855e1ee6122d9378229fb3432dbb488 207 SUPERFAMILY SSF53474 23 198 4.73E-11 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_02425 c783eea0be29168696d31563e170b8fd 243 SUPERFAMILY SSF53474 57 242 1.09E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_02425 c783eea0be29168696d31563e170b8fd 243 Gene3D G3DSA:3.40.50.1820 49 242 6.2E-18 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_02425 c783eea0be29168696d31563e170b8fd 243 Pfam PF12695 Alpha/beta hydrolase family 65 228 1.5E-53 T 12-10-2018 IPR029059 Alpha/beta hydrolase fold-5 N288_16815 07e7a6394fb618d5b877cbf22cb90914 87 SUPERFAMILY SSF116842 8 72 6.67E-5 T 12-10-2018 N288_10855 f165c8aea7315b1ee32183a9d0ef5d4f 317 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 11 304 7.8E-79 T 12-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 N288_10855 f165c8aea7315b1ee32183a9d0ef5d4f 317 Gene3D G3DSA:3.40.50.300 2 315 1.2E-80 T 12-10-2018 N288_10855 f165c8aea7315b1ee32183a9d0ef5d4f 317 SUPERFAMILY SSF52540 8 290 5.02E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_10855 f165c8aea7315b1ee32183a9d0ef5d4f 317 Pfam PF02374 Anion-transporting ATPase 8 308 7.0E-77 T 12-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 N288_09070 f8b9ffdbbc639182856c04c4b625f148 266 ProSitePatterns PS01237 Uncharacterized protein family UPF0028 signature. 11 43 - T 12-10-2018 IPR001423 Lysophospholipase patatin, conserved site GO:0004622|GO:0046470 Reactome: R-HSA-6814848 N288_09070 f8b9ffdbbc639182856c04c4b625f148 266 Gene3D G3DSA:3.40.1090.10 1 99 3.9E-25 T 12-10-2018 N288_09070 f8b9ffdbbc639182856c04c4b625f148 266 Gene3D G3DSA:3.40.1090.10 100 219 2.7E-22 T 12-10-2018 N288_09070 f8b9ffdbbc639182856c04c4b625f148 266 Pfam PF01734 Patatin-like phospholipase 8 164 1.8E-21 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 N288_09070 f8b9ffdbbc639182856c04c4b625f148 266 SUPERFAMILY SSF52151 1 257 1.96E-57 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase N288_10895 e9b4947851de875885ae4f421b4e57ba 1046 Pfam PF13558 Putative exonuclease SbcCD, C subunit 940 1001 8.1E-12 T 12-10-2018 N288_10895 e9b4947851de875885ae4f421b4e57ba 1046 SUPERFAMILY SSF52540 26 1030 1.52E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_10895 e9b4947851de875885ae4f421b4e57ba 1046 Gene3D G3DSA:3.40.50.300 754 1042 1.1E-27 T 12-10-2018 N288_10895 e9b4947851de875885ae4f421b4e57ba 1046 Gene3D G3DSA:3.40.50.300 1 232 6.5E-40 T 12-10-2018 N288_10895 e9b4947851de875885ae4f421b4e57ba 1046 SUPERFAMILY SSF52540 772 1036 9.08E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_22550 f0e7b4eb96b781e5e7293f1f2a72ad17 423 Gene3D G3DSA:3.20.20.140 52 359 1.2E-183 T 12-10-2018 N288_22550 f0e7b4eb96b781e5e7293f1f2a72ad17 423 SUPERFAMILY SSF51338 2 404 1.05E-6 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_22550 f0e7b4eb96b781e5e7293f1f2a72ad17 423 Gene3D G3DSA:2.30.40.10 6 405 1.2E-183 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 N288_22550 f0e7b4eb96b781e5e7293f1f2a72ad17 423 Pfam PF07969 Amidohydrolase family 39 400 2.3E-49 T 12-10-2018 IPR013108 Amidohydrolase 3 N288_22550 f0e7b4eb96b781e5e7293f1f2a72ad17 423 SUPERFAMILY SSF51556 51 370 3.28E-106 T 12-10-2018 IPR032466 Metal-dependent hydrolase N288_24905 ce165db8239f978e7597f3215530b3f1 427 SUPERFAMILY SSF52096 3 419 5.47E-27 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_24905 ce165db8239f978e7597f3215530b3f1 427 Pfam PF03572 Peptidase family S41 186 398 2.4E-15 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 N288_24905 ce165db8239f978e7597f3215530b3f1 427 Gene3D G3DSA:3.90.226.10 290 416 1.0E-13 T 12-10-2018 N288_24905 ce165db8239f978e7597f3215530b3f1 427 Gene3D G3DSA:3.30.750.44 359 377 1.0E-13 T 12-10-2018 N288_22985 bec0fb11a0de732ec68e972532cfb10d 243 Gene3D G3DSA:3.50.30.100 1 222 4.9E-38 T 12-10-2018 N288_22985 bec0fb11a0de732ec68e972532cfb10d 243 Pfam PF03737 Aldolase/RraA 28 199 2.8E-19 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein N288_22985 bec0fb11a0de732ec68e972532cfb10d 243 SUPERFAMILY SSF89562 24 210 6.28E-23 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily N288_20950 3ea3f70c9dac545d06dae21e3364d960 79 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 4 78 5.0E-29 T 12-10-2018 N288_20950 3ea3f70c9dac545d06dae21e3364d960 79 Pfam PF07293 Protein of unknown function (DUF1450) 2 76 3.0E-37 T 12-10-2018 IPR009910 Protein of unknown function DUF1450 N288_20950 3ea3f70c9dac545d06dae21e3364d960 79 Hamap MF_01542 UPF0349 protein . 2 78 30.151 T 12-10-2018 IPR022916 Protein of unknown function UPF0349 N288_25600 48566acc624c6ea1d3d8fd0c52b2933d 487 Pfam PF12704 MacB-like periplasmic core domain 54 287 2.8E-10 T 12-10-2018 IPR025857 MacB-like periplasmic core domain N288_25600 48566acc624c6ea1d3d8fd0c52b2933d 487 Pfam PF02687 FtsX-like permease family 348 479 3.2E-15 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 N288_18560 4b453c20adb62b4ab22f1a8561d65afb 248 SUPERFAMILY SSF53335 3 247 3.58E-50 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_18560 4b453c20adb62b4ab22f1a8561d65afb 248 Gene3D G3DSA:3.40.50.150 5 245 6.5E-83 T 12-10-2018 N288_18560 4b453c20adb62b4ab22f1a8561d65afb 248 Pfam PF13649 Methyltransferase domain 41 135 9.8E-20 T 12-10-2018 N288_18560 4b453c20adb62b4ab22f1a8561d65afb 248 Gene3D G3DSA:2.20.25.110 143 206 6.5E-83 T 12-10-2018 N288_25655 e46266e1545e4878932c4e278104fe0a 228 ProDom PD114754 YWBB 1 223 2.0E-56 T 12-10-2018 IPR024250 Protein of unknown function DUF2711 N288_25655 e46266e1545e4878932c4e278104fe0a 228 Pfam PF10924 Protein of unknown function (DUF2711) 9 223 2.7E-107 T 12-10-2018 IPR024250 Protein of unknown function DUF2711 N288_16780 0edae57e7c0d368bf9251d92d7b5be3c 305 SUPERFAMILY SSF161098 79 233 3.27E-9 T 12-10-2018 IPR035906 MetI-like superfamily N288_16780 0edae57e7c0d368bf9251d92d7b5be3c 305 Gene3D G3DSA:1.10.3720.10 73 303 3.6E-7 T 12-10-2018 IPR035906 MetI-like superfamily N288_18840 80b9fea5b7d470281639c1af7823590c 170 Pfam PF00156 Phosphoribosyl transferase domain 32 148 1.8E-15 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 N288_18840 80b9fea5b7d470281639c1af7823590c 170 Gene3D G3DSA:3.40.50.2020 1 170 3.2E-59 T 12-10-2018 N288_18840 80b9fea5b7d470281639c1af7823590c 170 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 38.352 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 N288_18840 80b9fea5b7d470281639c1af7823590c 170 SUPERFAMILY SSF53271 2 163 2.13E-49 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like N288_18840 80b9fea5b7d470281639c1af7823590c 170 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 4.5E-71 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 N288_15825 59377839209f8f164e42dcb2f2f1e7c5 218 Gene3D G3DSA:3.40.50.1110 1 210 2.3E-25 T 12-10-2018 IPR036514 SGNH hydrolase superfamily N288_15825 59377839209f8f164e42dcb2f2f1e7c5 218 SUPERFAMILY SSF52266 5 209 1.36E-26 T 12-10-2018 N288_15825 59377839209f8f164e42dcb2f2f1e7c5 218 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 12 201 1.7E-22 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain N288_14960 b7a220a88637fc6c11a12b901ff520c3 572 Gene3D G3DSA:3.10.620.30 391 556 2.8E-36 T 12-10-2018 N288_14960 b7a220a88637fc6c11a12b901ff520c3 572 SMART SM00460 475 535 2.2E-18 T 12-10-2018 IPR002931 Transglutaminase-like N288_14960 b7a220a88637fc6c11a12b901ff520c3 572 Pfam PF01841 Transglutaminase-like superfamily 426 533 8.2E-26 T 12-10-2018 IPR002931 Transglutaminase-like N288_14960 b7a220a88637fc6c11a12b901ff520c3 572 SUPERFAMILY SSF54001 412 544 5.47E-31 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily N288_09065 294d4a24bfeaf18ffc38151f00c914b4 370 Pfam PF07670 Nucleoside recognition 6 102 4.8E-6 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 N288_09065 294d4a24bfeaf18ffc38151f00c914b4 370 TIGRFAM TIGR02871 spore_ylbJ: sporulation integral membrane protein YlbJ 1 331 4.8E-118 T 12-10-2018 IPR014226 Sporulation integral membrane protein YlbJ N288_24505 df6ec7a1cb2f0898b64d719541e1c3e0 187 Gene3D G3DSA:3.40.30.10 1 186 2.6E-59 T 12-10-2018 N288_24505 df6ec7a1cb2f0898b64d719541e1c3e0 187 SUPERFAMILY SSF52833 1 187 1.77E-55 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_24505 df6ec7a1cb2f0898b64d719541e1c3e0 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 1.2E-103 T 12-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 N288_24505 df6ec7a1cb2f0898b64d719541e1c3e0 187 Pfam PF00578 AhpC/TSA family 4 133 9.8E-34 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 N288_24505 df6ec7a1cb2f0898b64d719541e1c3e0 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 1.6E-4 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 N288_24505 df6ec7a1cb2f0898b64d719541e1c3e0 187 PIRSF PIRSF000239 1 187 2.6E-50 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 N288_07900 795eafa4d7314ff834b4137eda32c65d 332 SUPERFAMILY SSF53850 42 329 3.98E-77 T 12-10-2018 N288_07900 795eafa4d7314ff834b4137eda32c65d 332 Gene3D G3DSA:3.40.190.10 48 328 2.9E-99 T 12-10-2018 N288_07900 795eafa4d7314ff834b4137eda32c65d 332 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 328 8.5E-109 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family N288_07900 795eafa4d7314ff834b4137eda32c65d 332 Gene3D G3DSA:3.40.190.10 131 267 2.9E-99 T 12-10-2018 N288_07900 795eafa4d7314ff834b4137eda32c65d 332 Pfam PF16868 NMT1-like family 48 328 4.4E-86 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family N288_16795 247cd726c7ea2b57bc96eac4e68585e2 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 281 1.7E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_16795 247cd726c7ea2b57bc96eac4e68585e2 287 Gene3D G3DSA:1.10.3720.10 73 283 7.3E-8 T 12-10-2018 IPR035906 MetI-like superfamily N288_16795 247cd726c7ea2b57bc96eac4e68585e2 287 SUPERFAMILY SSF161098 73 276 2.62E-9 T 12-10-2018 IPR035906 MetI-like superfamily N288_12715 3eacaad26e8b0387927db1e8026bb9e1 305 Pfam PF01545 Cation efflux family 22 214 4.8E-49 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 N288_12715 3eacaad26e8b0387927db1e8026bb9e1 305 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 294 5.3E-93 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 N288_12715 3eacaad26e8b0387927db1e8026bb9e1 305 SUPERFAMILY SSF160240 218 293 2.62E-7 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 N288_12715 3eacaad26e8b0387927db1e8026bb9e1 305 Gene3D G3DSA:1.20.1510.10 18 214 1.2E-45 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily N288_12715 3eacaad26e8b0387927db1e8026bb9e1 305 SUPERFAMILY SSF161111 16 215 5.75E-58 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily N288_19305 bb5cfd44548eacdbed3760b3ac66e8d2 174 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 3 150 1.4E-31 T 12-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 N288_19305 bb5cfd44548eacdbed3760b3ac66e8d2 174 Gene3D G3DSA:3.60.21.10 1 170 2.3E-47 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_19305 bb5cfd44548eacdbed3760b3ac66e8d2 174 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 3 146 1.5E-28 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 N288_19305 bb5cfd44548eacdbed3760b3ac66e8d2 174 SUPERFAMILY SSF56300 1 164 8.3E-44 T 12-10-2018 N288_03540 d68731a2ae4b3c8f6f5cf3a8b2703138 698 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 296 311 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 N288_03540 d68731a2ae4b3c8f6f5cf3a8b2703138 698 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 679 2.2E-197 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 N288_03540 d68731a2ae4b3c8f6f5cf3a8b2703138 698 SMART SM00436 125 215 3.3E-39 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 N288_03540 d68731a2ae4b3c8f6f5cf3a8b2703138 698 Gene3D G3DSA:1.10.290.10 268 398 1.9E-132 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 N288_03540 d68731a2ae4b3c8f6f5cf3a8b2703138 698 SUPERFAMILY SSF56712 1 596 1.83E-174 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain N288_03540 d68731a2ae4b3c8f6f5cf3a8b2703138 698 Pfam PF01131 DNA topoisomerase 154 557 2.7E-130 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 N288_03540 d68731a2ae4b3c8f6f5cf3a8b2703138 698 SMART SM00437 259 522 1.6E-69 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 N288_03540 d68731a2ae4b3c8f6f5cf3a8b2703138 698 Gene3D G3DSA:2.70.20.10 209 468 1.9E-132 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 N288_03540 d68731a2ae4b3c8f6f5cf3a8b2703138 698 Gene3D G3DSA:1.10.460.10 159 566 1.9E-132 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 N288_03540 d68731a2ae4b3c8f6f5cf3a8b2703138 698 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 185 203 3.5E-28 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 N288_03540 d68731a2ae4b3c8f6f5cf3a8b2703138 698 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 384 400 3.5E-28 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 N288_03540 d68731a2ae4b3c8f6f5cf3a8b2703138 698 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 302 311 3.5E-28 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 N288_03540 d68731a2ae4b3c8f6f5cf3a8b2703138 698 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.5E-28 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 N288_03540 d68731a2ae4b3c8f6f5cf3a8b2703138 698 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 484 498 3.5E-28 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 N288_03540 d68731a2ae4b3c8f6f5cf3a8b2703138 698 Gene3D G3DSA:3.40.50.140 2 153 1.3E-52 T 12-10-2018 N288_03540 d68731a2ae4b3c8f6f5cf3a8b2703138 698 Pfam PF01751 Toprim domain 4 133 1.9E-15 T 12-10-2018 IPR006171 TOPRIM domain N288_03540 d68731a2ae4b3c8f6f5cf3a8b2703138 698 SMART SM00493 2 125 7.3E-18 T 12-10-2018 IPR006171 TOPRIM domain N288_04270 a7f2759b4bd826368b5870c80ce5950a 159 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 5 144 8.4E-50 T 12-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain N288_04270 a7f2759b4bd826368b5870c80ce5950a 159 Gene3D G3DSA:2.30.110.10 2 141 7.2E-42 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 N288_04270 a7f2759b4bd826368b5870c80ce5950a 159 SUPERFAMILY SSF50475 7 130 7.86E-30 T 12-10-2018 N288_22065 4ae61aec9d8adee022bd7c440e21d5fe 138 TIGRFAM TIGR03826 YvyF: flagellar operon protein TIGR03826 2 137 2.3E-49 T 12-10-2018 IPR022258 Flagellar operon protein YvyF N288_15475 808b2068dca556bd25d9a45bd2fc8371 476 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 39 471 2.9E-91 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 N288_15475 808b2068dca556bd25d9a45bd2fc8371 476 Pfam PF00939 Sodium:sulfate symporter transmembrane region 33 472 4.8E-82 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 N288_15475 808b2068dca556bd25d9a45bd2fc8371 476 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 422 438 - T 12-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 N288_00260 e270da7d8949a8673c47083a43c7246d 256 Pfam PF01026 TatD related DNase 3 253 5.8E-92 T 12-10-2018 IPR001130 TatD family GO:0016788 N288_00260 e270da7d8949a8673c47083a43c7246d 256 SUPERFAMILY SSF51556 2 255 1.63E-99 T 12-10-2018 IPR032466 Metal-dependent hydrolase N288_00260 e270da7d8949a8673c47083a43c7246d 256 PIRSF PIRSF005902 1 256 1.2E-90 T 12-10-2018 IPR001130 TatD family GO:0016788 N288_00260 e270da7d8949a8673c47083a43c7246d 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 N288_00260 e270da7d8949a8673c47083a43c7246d 256 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 N288_00260 e270da7d8949a8673c47083a43c7246d 256 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 1.1E-102 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 N288_00260 e270da7d8949a8673c47083a43c7246d 256 Gene3D G3DSA:3.20.20.140 1 256 8.7E-114 T 12-10-2018 N288_18450 ef7a20c3544d21eefb2c27bab708b8e0 57 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 56 1.8E-21 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18450 ef7a20c3544d21eefb2c27bab708b8e0 57 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.633 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18450 ef7a20c3544d21eefb2c27bab708b8e0 57 Pfam PF01165 Ribosomal protein S21 5 57 1.5E-21 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18450 ef7a20c3544d21eefb2c27bab708b8e0 57 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.3E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18450 ef7a20c3544d21eefb2c27bab708b8e0 57 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.3E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18450 ef7a20c3544d21eefb2c27bab708b8e0 57 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.3E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18450 ef7a20c3544d21eefb2c27bab708b8e0 57 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.3E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18450 ef7a20c3544d21eefb2c27bab708b8e0 57 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 12-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_18450 ef7a20c3544d21eefb2c27bab708b8e0 57 Gene3D G3DSA:1.20.5.1150 16 56 1.7E-18 T 12-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_18450 ef7a20c3544d21eefb2c27bab708b8e0 57 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 7.0E-9 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_26020 5cfe41d5142c942061deeedb6db6526f 258 PRINTS PR01900 YidC translocation/secretion protein signature 197 221 3.3E-6 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 N288_26020 5cfe41d5142c942061deeedb6db6526f 258 PRINTS PR01900 YidC translocation/secretion protein signature 175 190 3.3E-6 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 N288_26020 5cfe41d5142c942061deeedb6db6526f 258 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 58 241 5.1E-68 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_26020 5cfe41d5142c942061deeedb6db6526f 258 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 2 246 32.699 T 12-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 N288_26020 5cfe41d5142c942061deeedb6db6526f 258 Pfam PF02096 60Kd inner membrane protein 59 241 6.3E-63 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 N288_17850 afe78eaf82fa2f7287a8babab00d103c 493 Gene3D G3DSA:1.10.287.950 166 493 2.2E-51 T 12-10-2018 N288_17850 afe78eaf82fa2f7287a8babab00d103c 493 SUPERFAMILY SSF58104 197 489 2.01E-48 T 12-10-2018 N288_17850 afe78eaf82fa2f7287a8babab00d103c 493 SMART SM00283 220 481 1.8E-35 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_17850 afe78eaf82fa2f7287a8babab00d103c 493 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 292 448 7.1E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_07425 369fe496661fa243dc5d50570c6bd88e 276 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 9 211 3.7E-61 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT N288_07425 369fe496661fa243dc5d50570c6bd88e 276 Gene3D G3DSA:3.30.70.120 188 264 5.3E-19 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal N288_07425 369fe496661fa243dc5d50570c6bd88e 276 PIRSF PIRSF006483 1 276 1.3E-95 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT N288_07425 369fe496661fa243dc5d50570c6bd88e 276 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 217 271 1.2E-17 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 N288_08675 789173ece65d37798ff6f54b3278caa8 47 SUPERFAMILY SSF57783 4 40 1.87E-5 T 12-10-2018 N288_15155 34467221b8d2225f9085c38224fffa56 218 SUPERFAMILY SSF161098 4 215 1.22E-48 T 12-10-2018 IPR035906 MetI-like superfamily N288_15155 34467221b8d2225f9085c38224fffa56 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 27 216 8.9E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_15155 34467221b8d2225f9085c38224fffa56 218 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 217 2.0E-72 T 12-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 N288_15155 34467221b8d2225f9085c38224fffa56 218 Gene3D G3DSA:1.10.3720.10 1 218 7.0E-52 T 12-10-2018 IPR035906 MetI-like superfamily N288_04580 c28ad83ab05aa785c6b457adf534a78e 152 Gene3D G3DSA:1.20.120.450 1 152 1.2E-11 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_04580 c28ad83ab05aa785c6b457adf534a78e 152 SUPERFAMILY SSF109854 1 152 1.39E-22 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_04580 c28ad83ab05aa785c6b457adf534a78e 152 Pfam PF12867 DinB superfamily 11 143 6.4E-12 T 12-10-2018 IPR024775 DinB-like domain N288_22685 f032a912f3276df1311d1e64715cc998 446 Pfam PF13520 Amino acid permease 10 406 9.7E-57 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 N288_22685 f032a912f3276df1311d1e64715cc998 446 PIRSF PIRSF006060 1 444 2.1E-85 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 N288_22685 f032a912f3276df1311d1e64715cc998 446 Gene3D G3DSA:1.20.1740.10 5 446 1.9E-90 T 12-10-2018 N288_17885 79523a9bd2d6375d2c489e4bb3649c42 68 Pfam PF06686 Stage III sporulation protein AC/AD protein family 8 62 1.1E-17 T 12-10-2018 IPR025664 Stage III sporulation protein AC/AD family N288_17885 79523a9bd2d6375d2c489e4bb3649c42 68 TIGRFAM TIGR02848 spore_III_AC: stage III sporulation protein AC 3 66 3.3E-31 T 12-10-2018 IPR009570 Stage III sporulation protein AC N288_03180 3d45aa3905f89b808711d31f1398f4d7 506 Pfam PF01425 Amidase 51 487 1.3E-94 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 N288_03180 3d45aa3905f89b808711d31f1398f4d7 506 Gene3D G3DSA:3.90.1300.10 2 506 1.0E-190 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 N288_03180 3d45aa3905f89b808711d31f1398f4d7 506 SUPERFAMILY SSF75304 30 502 3.4E-113 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 N288_02985 13c32748a061903bee8edcfe3c871776 185 SUPERFAMILY SSF53254 2 184 6.21E-31 T 12-10-2018 IPR029033 Histidine phosphatase superfamily N288_02985 13c32748a061903bee8edcfe3c871776 185 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 167 7.9E-23 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 N288_02985 13c32748a061903bee8edcfe3c871776 185 Gene3D G3DSA:3.40.50.1240 2 181 1.3E-27 T 12-10-2018 IPR029033 Histidine phosphatase superfamily N288_02985 13c32748a061903bee8edcfe3c871776 185 SMART SM00855 4 145 8.5E-6 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 N288_13025 1d7e5514fe49986594835ad992e8d8bb 288 Gene3D G3DSA:1.10.600.10 14 287 1.6E-60 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily N288_13025 1d7e5514fe49986594835ad992e8d8bb 288 Pfam PF00494 Squalene/phytoene synthase 31 217 1.4E-18 T 12-10-2018 N288_13025 1d7e5514fe49986594835ad992e8d8bb 288 SUPERFAMILY SSF48576 26 272 2.01E-42 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily N288_05695 d9f5bae3d56e0e31ae6098cf390c041f 336 SMART SM00382 35 243 2.2E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_05695 d9f5bae3d56e0e31ae6098cf390c041f 336 Pfam PF00005 ABC transporter 27 185 8.8E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_05695 d9f5bae3d56e0e31ae6098cf390c041f 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 322 5.9E-27 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_05695 d9f5bae3d56e0e31ae6098cf390c041f 336 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_05695 d9f5bae3d56e0e31ae6098cf390c041f 336 SUPERFAMILY SSF52540 34 315 3.01E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_05695 d9f5bae3d56e0e31ae6098cf390c041f 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 301 1.1E-20 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 N288_05695 d9f5bae3d56e0e31ae6098cf390c041f 336 Gene3D G3DSA:3.40.50.300 4 333 8.5E-98 T 12-10-2018 N288_16635 47e50a84b2ff1d878c56c1855de65687 1230 SUPERFAMILY SSF52540 34 260 2.03E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_16635 47e50a84b2ff1d878c56c1855de65687 1230 SUPERFAMILY SSF52540 612 926 7.71E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_16635 47e50a84b2ff1d878c56c1855de65687 1230 Pfam PF00350 Dynamin family 50 204 2.6E-26 T 12-10-2018 IPR022812 Dynamin superfamily N288_16635 47e50a84b2ff1d878c56c1855de65687 1230 Pfam PF00350 Dynamin family 633 855 4.2E-41 T 12-10-2018 IPR022812 Dynamin superfamily N288_16635 47e50a84b2ff1d878c56c1855de65687 1230 Gene3D G3DSA:3.40.50.300 50 286 3.0E-39 T 12-10-2018 N288_16530 b4c91d69483c81e438d3119027094ae6 293 Gene3D G3DSA:1.10.3470.10 9 277 3.2E-6 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_16530 b4c91d69483c81e438d3119027094ae6 293 Pfam PF00950 ABC 3 transport family 7 273 1.4E-44 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 N288_16530 b4c91d69483c81e438d3119027094ae6 293 SUPERFAMILY SSF81345 6 274 3.27E-32 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_24315 950ab92d6f881884395d68e823b36657 552 SUPERFAMILY SSF53187 7 532 1.61E-31 T 12-10-2018 N288_24315 950ab92d6f881884395d68e823b36657 552 PIRSF PIRSF010386 1 552 3.7E-176 T 12-10-2018 IPR012166 Uncharacterised protein family RocB N288_24315 950ab92d6f881884395d68e823b36657 552 Pfam PF01546 Peptidase family M20/M25/M40 85 477 1.3E-12 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 N288_24315 950ab92d6f881884395d68e823b36657 552 Gene3D G3DSA:3.40.630.10 5 235 3.3E-35 T 12-10-2018 N288_23650 6c5d762b4ca82aae80afad2f69827034 104 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 9 99 5.2E-26 T 12-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like N288_23650 6c5d762b4ca82aae80afad2f69827034 104 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 104 20.511 T 12-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 N288_11680 fa55cab08a3ce573b1de963ab7d5e997 61 TIGRFAM TIGR02864 spore_sspO: small, acid-soluble spore protein O 14 61 6.9E-27 T 12-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 N288_11680 fa55cab08a3ce573b1de963ab7d5e997 61 Hamap MF_00665 Small, acid-soluble spore protein O [sspO]. 13 61 21.04 T 12-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 N288_11680 fa55cab08a3ce573b1de963ab7d5e997 61 Pfam PF08175 Small acid-soluble spore protein O family 14 61 2.3E-26 T 12-10-2018 N288_11680 fa55cab08a3ce573b1de963ab7d5e997 61 ProDom PD050103 O SPORE SMALL ACID-SOLUBLE SASP SPORULATION CAPSID COAT K SEQUENCING 15 49 2.0E-11 T 12-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 N288_16410 e815cd23aa5578a56cb0f6e5d925dc5d 398 Pfam PF15617 C-C_Bond_Lyase of the TIM-Barrel fold 31 378 3.0E-130 T 12-10-2018 IPR039480 C-C bond lyase-like N288_16410 e815cd23aa5578a56cb0f6e5d925dc5d 398 Gene3D G3DSA:3.20.20.60 264 383 1.3E-7 T 12-10-2018 N288_16410 e815cd23aa5578a56cb0f6e5d925dc5d 398 SUPERFAMILY SSF51621 34 322 3.77E-23 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 N288_16410 e815cd23aa5578a56cb0f6e5d925dc5d 398 Gene3D G3DSA:3.20.20.60 35 234 2.1E-5 T 12-10-2018 N288_07095 369c7edbf36710e81e3c085c8701a902 190 PIRSF PIRSF011560 4 190 5.8E-60 T 12-10-2018 IPR010461 Competence protein ComK GO:0030420 N288_07095 369c7edbf36710e81e3c085c8701a902 190 Pfam PF06338 ComK protein 10 158 2.9E-59 T 12-10-2018 IPR010461 Competence protein ComK GO:0030420 N288_18100 856ff85a982d32c4ae9fd622b1899bc7 386 SUPERFAMILY SSF69322 83 226 4.71E-9 T 12-10-2018 N288_22480 f58574e3885d20375a2cf0a060219868 318 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 N288_22480 f58574e3885d20375a2cf0a060219868 318 Gene3D G3DSA:3.40.1190.20 5 317 2.5E-88 T 12-10-2018 IPR029056 Ribokinase-like N288_22480 f58574e3885d20375a2cf0a060219868 318 Pfam PF00294 pfkB family carbohydrate kinase 5 301 3.5E-50 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB N288_22480 f58574e3885d20375a2cf0a060219868 318 SUPERFAMILY SSF53613 4 310 1.36E-81 T 12-10-2018 IPR029056 Ribokinase-like N288_20800 0d6807ac232a2860a6aec620892796b6 128 SUPERFAMILY SSF54637 6 127 3.9E-33 T 12-10-2018 IPR029069 HotDog domain superfamily N288_20800 0d6807ac232a2860a6aec620892796b6 128 Pfam PF03061 Thioesterase superfamily 38 116 4.1E-17 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 N288_20800 0d6807ac232a2860a6aec620892796b6 128 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 8 124 1.5E-38 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 N288_20800 0d6807ac232a2860a6aec620892796b6 128 Gene3D G3DSA:3.10.129.10 2 128 6.5E-54 T 12-10-2018 N288_12285 05f90e5e312ce4dc111367c8ae8221c4 199 Pfam PF02630 SCO1/SenC 29 180 1.8E-24 T 12-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_12285 05f90e5e312ce4dc111367c8ae8221c4 199 SUPERFAMILY SSF52833 34 193 1.67E-34 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_12285 05f90e5e312ce4dc111367c8ae8221c4 199 Gene3D G3DSA:3.40.30.10 26 199 5.2E-44 T 12-10-2018 N288_16455 69dcf3d5172f940b44d5bdf5111a98f5 626 Gene3D G3DSA:1.10.287.380 551 626 1.5E-9 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 N288_16455 69dcf3d5172f940b44d5bdf5111a98f5 626 SUPERFAMILY SSF52540 314 517 1.15E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_16455 69dcf3d5172f940b44d5bdf5111a98f5 626 Pfam PF00005 ABC transporter 20 187 3.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_16455 69dcf3d5172f940b44d5bdf5111a98f5 626 Gene3D G3DSA:3.40.50.300 282 550 1.2E-60 T 12-10-2018 N288_16455 69dcf3d5172f940b44d5bdf5111a98f5 626 SMART SM00382 28 231 1.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_16455 69dcf3d5172f940b44d5bdf5111a98f5 626 SMART SM00382 344 515 3.9E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_16455 69dcf3d5172f940b44d5bdf5111a98f5 626 Pfam PF16326 ABC transporter C-terminal domain 556 622 7.4E-14 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 N288_16455 69dcf3d5172f940b44d5bdf5111a98f5 626 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_16455 69dcf3d5172f940b44d5bdf5111a98f5 626 Gene3D G3DSA:3.40.50.300 1 281 2.5E-73 T 12-10-2018 N288_16455 69dcf3d5172f940b44d5bdf5111a98f5 626 Pfam PF12848 ABC transporter 226 296 6.9E-15 T 12-10-2018 IPR032781 ABC-transporter extension domain N288_16455 69dcf3d5172f940b44d5bdf5111a98f5 626 SUPERFAMILY SSF52540 3 235 1.99E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_16455 69dcf3d5172f940b44d5bdf5111a98f5 626 Pfam PF00005 ABC transporter 335 470 2.4E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_00320 ac603948d7d21c1e1a8fe8cd5565fdfe 96 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 92 28.093 T 12-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 N288_00320 ac603948d7d21c1e1a8fe8cd5565fdfe 96 Pfam PF04026 SpoVG 1 81 1.1E-35 T 12-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 N288_00320 ac603948d7d21c1e1a8fe8cd5565fdfe 96 SUPERFAMILY SSF160537 1 89 1.07E-33 T 12-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 N288_00320 ac603948d7d21c1e1a8fe8cd5565fdfe 96 Gene3D G3DSA:3.30.1120.40 1 96 1.4E-38 T 12-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 N288_06560 7f7c3550362095ea420695c9bbf6b4d8 183 SUPERFAMILY SSF55729 2 171 1.59E-43 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_06560 7f7c3550362095ea420695c9bbf6b4d8 183 Gene3D G3DSA:3.40.630.30 1 178 2.6E-43 T 12-10-2018 N288_06560 7f7c3550362095ea420695c9bbf6b4d8 183 Pfam PF13302 Acetyltransferase (GNAT) domain 5 146 8.0E-31 T 12-10-2018 IPR000182 GNAT domain N288_23320 7613a428c1d51e4f42ebc34f3aa5bfb6 376 Gene3D G3DSA:3.90.1150.10 254 374 2.3E-41 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_23320 7613a428c1d51e4f42ebc34f3aa5bfb6 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 23 370 2.3E-100 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase N288_23320 7613a428c1d51e4f42ebc34f3aa5bfb6 376 SUPERFAMILY SSF53383 9 372 4.08E-105 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_23320 7613a428c1d51e4f42ebc34f3aa5bfb6 376 Gene3D G3DSA:3.40.640.10 1 252 4.7E-86 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_23320 7613a428c1d51e4f42ebc34f3aa5bfb6 376 PIRSF PIRSF000390 5 374 1.1E-106 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase N288_14195 ee3e1ccce746a235f8b06489732cd6f7 202 Pfam PF01738 Dienelactone hydrolase family 79 190 6.6E-10 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 N288_14195 ee3e1ccce746a235f8b06489732cd6f7 202 Gene3D G3DSA:3.40.50.1820 1 202 2.9E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_14195 ee3e1ccce746a235f8b06489732cd6f7 202 SUPERFAMILY SSF53474 2 198 2.59E-56 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_11150 96d4d528d86e1b38fccf12386a3284b9 159 SUPERFAMILY SSF55811 8 141 1.35E-24 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_11150 96d4d528d86e1b38fccf12386a3284b9 159 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_11150 96d4d528d86e1b38fccf12386a3284b9 159 Gene3D G3DSA:3.90.79.10 1 133 1.7E-21 T 12-10-2018 N288_11150 96d4d528d86e1b38fccf12386a3284b9 159 Pfam PF00293 NUDIX domain 6 109 6.3E-15 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_20015 0cff489db50808e41f221fc1ba387e37 279 SUPERFAMILY SSF56281 4 261 4.85E-44 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_20015 0cff489db50808e41f221fc1ba387e37 279 SMART SM00849 50 256 4.2E-21 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_20015 0cff489db50808e41f221fc1ba387e37 279 Pfam PF00753 Metallo-beta-lactamase superfamily 54 243 6.1E-16 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_20015 0cff489db50808e41f221fc1ba387e37 279 Gene3D G3DSA:3.60.15.10 4 268 9.3E-81 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_16500 4a70e7106e077bd88de0af0e21466c73 230 Pfam PF01987 Mitochondrial biogenesis AIM24 27 220 3.6E-38 T 12-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 N288_16500 4a70e7106e077bd88de0af0e21466c73 230 SUPERFAMILY SSF51219 28 224 3.66E-56 T 12-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily N288_16500 4a70e7106e077bd88de0af0e21466c73 230 Gene3D G3DSA:3.60.160.10 14 227 3.4E-32 T 12-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily N288_00670 fc3ce35fb160586e5330b6156207e37c 56 Hamap MF_00422 Protein translocase subunit SecE [secE]. 1 53 12.4 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 N288_00670 fc3ce35fb160586e5330b6156207e37c 56 Gene3D G3DSA:1.20.5.1030 1 54 7.3E-19 T 12-10-2018 IPR038379 SecE superfamily N288_00670 fc3ce35fb160586e5330b6156207e37c 56 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 1 54 1.2E-21 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 N288_00670 fc3ce35fb160586e5330b6156207e37c 56 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 1 55 2.1E-23 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 N288_00670 fc3ce35fb160586e5330b6156207e37c 56 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 3 31 - T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 N288_25740 5f2d5ade8c5e70fada41584de9c5946a 235 SUPERFAMILY SSF48371 1 235 5.47E-63 T 12-10-2018 IPR016024 Armadillo-type fold N288_25740 5f2d5ade8c5e70fada41584de9c5946a 235 Pfam PF08713 DNA alkylation repair enzyme 6 192 6.6E-19 T 12-10-2018 IPR014825 DNA alkylation repair enzyme N288_05375 aba9e52663af8ab58766f62facfe94b5 181 Gene3D G3DSA:3.40.50.360 1 174 5.0E-45 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_05375 aba9e52663af8ab58766f62facfe94b5 181 Pfam PF03358 NADPH-dependent FMN reductase 45 104 5.9E-9 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 N288_05375 aba9e52663af8ab58766f62facfe94b5 181 SUPERFAMILY SSF52218 2 172 6.16E-41 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_15790 ef050b655c746fad53915b6c09ce979c 59 Pfam PF08141 Small acid-soluble spore protein H family 1 58 2.7E-20 T 12-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 N288_15790 ef050b655c746fad53915b6c09ce979c 59 ProDom PD052450 H SPORE ACID-SOLUBLE SMALL SASP SPORULATION SMALL PROTEIN-RELATED SOLUBLE RBL04815 1 58 9.0E-6 T 12-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 N288_16200 56149f50c38ee178e78d59061c79824e 473 Gene3D G3DSA:3.40.605.10 25 458 3.3E-159 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 N288_16200 56149f50c38ee178e78d59061c79824e 473 Gene3D G3DSA:3.40.309.10 250 438 3.3E-159 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 N288_16200 56149f50c38ee178e78d59061c79824e 473 Pfam PF00171 Aldehyde dehydrogenase family 18 468 3.1E-163 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 N288_16200 56149f50c38ee178e78d59061c79824e 473 SUPERFAMILY SSF53720 3 472 1.57E-152 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 N288_25405 9900e9c7284e6909570df2c619edaa39 382 SUPERFAMILY SSF52402 253 371 2.02E-12 T 12-10-2018 N288_25405 9900e9c7284e6909570df2c619edaa39 382 Gene3D G3DSA:3.40.50.300 22 232 6.8E-92 T 12-10-2018 N288_25405 9900e9c7284e6909570df2c619edaa39 382 Gene3D G3DSA:3.40.50.620 251 380 3.3E-11 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_25405 9900e9c7284e6909570df2c619edaa39 382 SUPERFAMILY SSF52540 32 144 7.97E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_25405 9900e9c7284e6909570df2c619edaa39 382 Pfam PF00582 Universal stress protein family 253 370 6.0E-10 T 12-10-2018 IPR006016 UspA N288_25405 9900e9c7284e6909570df2c619edaa39 382 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 25 233 8.9E-92 T 12-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 N288_10195 1dd4a4d05aec99ab2e53930038ed57ce 346 Gene3D G3DSA:3.10.180.10 1 206 2.6E-47 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_10195 1dd4a4d05aec99ab2e53930038ed57ce 346 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 226 338 3.1E-6 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_10195 1dd4a4d05aec99ab2e53930038ed57ce 346 Gene3D G3DSA:3.10.180.10 215 346 3.1E-44 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_10195 1dd4a4d05aec99ab2e53930038ed57ce 346 SUPERFAMILY SSF54593 1 112 1.13E-16 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_10195 1dd4a4d05aec99ab2e53930038ed57ce 346 SUPERFAMILY SSF54593 225 342 2.55E-17 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_03030 40f1b906f3819ee652bced641c5886b2 188 SUPERFAMILY SSF53597 8 185 2.23E-35 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 N288_03030 40f1b906f3819ee652bced641c5886b2 188 Pfam PF01872 RibD C-terminal domain 8 180 2.3E-25 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 N288_03030 40f1b906f3819ee652bced641c5886b2 188 Gene3D G3DSA:3.40.430.10 8 184 3.2E-53 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 N288_21860 a0ba3b444b31fa9b6d7085b2d68bb146 257 Gene3D G3DSA:3.40.50.150 3 257 4.5E-41 T 12-10-2018 N288_21860 a0ba3b444b31fa9b6d7085b2d68bb146 257 Pfam PF08241 Methyltransferase domain 39 134 1.4E-22 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 N288_21860 a0ba3b444b31fa9b6d7085b2d68bb146 257 SUPERFAMILY SSF53335 16 257 6.66E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_10980 d2a8702d3c0048e4ca3a4a13154e58b1 344 SUPERFAMILY SSF50182 174 239 1.9E-15 T 12-10-2018 IPR010920 LSM domain superfamily N288_10980 d2a8702d3c0048e4ca3a4a13154e58b1 344 Pfam PF00924 Mechanosensitive ion channel 132 331 3.8E-35 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 N288_10980 d2a8702d3c0048e4ca3a4a13154e58b1 344 SUPERFAMILY SSF82861 91 171 3.01E-10 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 N288_10980 d2a8702d3c0048e4ca3a4a13154e58b1 344 Gene3D G3DSA:2.30.30.60 189 237 3.4E-9 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily N288_14940 2469dafbed80be246b7eb7f855dcc5e9 230 Pfam PF04172 LrgB-like family 12 224 7.3E-68 T 12-10-2018 IPR007300 CidB/LrgB family N288_25505 f358058e4e3a32414587e0fd6c5c7ae0 340 Gene3D G3DSA:3.40.710.10 7 332 3.5E-61 T 12-10-2018 N288_25505 f358058e4e3a32414587e0fd6c5c7ae0 340 SUPERFAMILY SSF56601 9 324 8.23E-59 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_25505 f358058e4e3a32414587e0fd6c5c7ae0 340 Pfam PF00144 Beta-lactamase 8 324 6.8E-40 T 12-10-2018 IPR001466 Beta-lactamase-related N288_06425 1275f99e740e467c8d991439d1649358 431 Pfam PF00860 Permease family 15 393 2.1E-42 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 N288_06425 1275f99e740e467c8d991439d1649358 431 PIRSF PIRSF005353 1 431 5.6E-163 T 12-10-2018 IPR026033 Purine permease PbuG-like N288_15325 0e08ca46cac71e0587574b3319ca3c76 114 Gene3D G3DSA:1.20.58.1000 13 113 3.1E-30 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily N288_15325 0e08ca46cac71e0587574b3319ca3c76 114 Pfam PF02583 Metal-sensitive transcriptional repressor 32 109 1.7E-28 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 N288_10745 7467cf60989b60a2b06f0414cbb50fe2 506 Gene3D G3DSA:3.40.190.10 162 502 1.1E-64 T 12-10-2018 N288_10745 7467cf60989b60a2b06f0414cbb50fe2 506 Pfam PF13416 Bacterial extracellular solute-binding protein 65 369 3.1E-20 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein N288_10745 7467cf60989b60a2b06f0414cbb50fe2 506 Gene3D G3DSA:3.40.190.10 65 418 1.1E-64 T 12-10-2018 N288_10745 7467cf60989b60a2b06f0414cbb50fe2 506 SUPERFAMILY SSF53850 25 503 5.51E-83 T 12-10-2018 N288_08270 f0dcdb29058f50ba7441501cca97512c 462 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 17 458 8.9E-117 T 12-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 N288_08270 f0dcdb29058f50ba7441501cca97512c 462 Pfam PF03553 Na+/H+ antiporter family 162 454 6.3E-53 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 N288_25370 e1bad9dcb714d64bc437ebd203b4f748 138 Pfam PF12120 Rifampin ADP-ribosyl transferase 13 110 8.2E-47 T 12-10-2018 IPR021975 Rifampin ADP-ribosyltransferase N288_25370 e1bad9dcb714d64bc437ebd203b4f748 138 Gene3D G3DSA:3.20.170.40 1 138 2.3E-62 T 12-10-2018 IPR038611 Rifampin ADP-ribosyltransferase superfamily N288_20750 09ded4f226ff5206a96bd35c12fe7698 185 Pfam PF17328 Family of unknown function (DUF5366) 28 184 2.0E-63 T 12-10-2018 IPR035289 Protein of unknown function DUF5366 N288_20750 09ded4f226ff5206a96bd35c12fe7698 185 ProDom PD108804 YUFK TRANSMEMBRANE MEMBRANE PRECURSOR SIGNAL 1 185 4.0E-29 T 12-10-2018 IPR035289 Protein of unknown function DUF5366 N288_12745 a118bf7c210fb48033d519202e067bba 157 SUPERFAMILY SSF54637 6 152 2.23E-45 T 12-10-2018 IPR029069 HotDog domain superfamily N288_12745 a118bf7c210fb48033d519202e067bba 157 Gene3D G3DSA:3.10.129.10 1 156 1.1E-52 T 12-10-2018 N288_12745 a118bf7c210fb48033d519202e067bba 157 Pfam PF03061 Thioesterase superfamily 27 98 4.5E-17 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 N288_15135 c4ed045569a466dc1b473da67d820a79 151 Pfam PF11181 Heat induced stress protein YflT 6 116 1.7E-20 T 12-10-2018 IPR025889 General stress protein 17M-like domain N288_07115 09f3f2ef49ee12ea03dc89a23ab4d34a 204 Pfam PF09335 SNARE associated Golgi protein 43 161 7.3E-23 T 12-10-2018 IPR032816 SNARE associated Golgi protein N288_19115 0bb68ce18aa0310367d0abcf2b975900 465 Pfam PF04294 VanW like protein 227 295 2.7E-6 T 12-10-2018 IPR007391 Vancomycin resistance VanW N288_19115 0bb68ce18aa0310367d0abcf2b975900 465 Pfam PF07501 G5 domain 313 375 9.4E-7 T 12-10-2018 IPR011098 G5 domain N288_19115 0bb68ce18aa0310367d0abcf2b975900 465 SMART SM01208 304 381 7.4E-6 T 12-10-2018 IPR011098 G5 domain N288_19115 0bb68ce18aa0310367d0abcf2b975900 465 Gene3D G3DSA:2.20.230.10 308 377 1.0E-7 T 12-10-2018 N288_06350 d22f58c146548a67f2aa53ccbb87a667 102 Gene3D G3DSA:1.10.10.10 1 102 7.6E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_06350 d22f58c146548a67f2aa53ccbb87a667 102 SUPERFAMILY SSF46785 3 100 1.01E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_06350 d22f58c146548a67f2aa53ccbb87a667 102 Pfam PF03551 Transcriptional regulator PadR-like family 18 88 1.1E-19 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal N288_20120 1610c1693f4f3ec91d0eafbe7e94b241 60 ProDom PD052690 CSE60 CYTOSOLIC YTEV LJ928 SPORULATION ORF85 PROPHAGE 1 60 5.0E-11 T 12-10-2018 IPR020296 Sporulation protein Cse60 N288_20120 1610c1693f4f3ec91d0eafbe7e94b241 60 Pfam PF10957 Sporulation protein Cse60 1 60 4.0E-36 T 12-10-2018 IPR020296 Sporulation protein Cse60 N288_24100 a624148788ec12661146dd66aa118869 339 Pfam PF00899 ThiF family 5 241 1.1E-53 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 N288_24100 a624148788ec12661146dd66aa118869 339 SUPERFAMILY SSF69572 3 332 4.58E-77 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 N288_24100 a624148788ec12661146dd66aa118869 339 Gene3D G3DSA:3.40.50.720 2 250 5.9E-69 T 12-10-2018 N288_21865 ac00bc35b5d9f38b9d4ee39a0fd2603d 157 SUPERFAMILY SSF55729 46 156 4.18E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_21865 ac00bc35b5d9f38b9d4ee39a0fd2603d 157 Gene3D G3DSA:3.40.630.30 30 151 5.0E-16 T 12-10-2018 N288_21865 ac00bc35b5d9f38b9d4ee39a0fd2603d 157 Pfam PF13673 Acetyltransferase (GNAT) domain 52 156 2.0E-13 T 12-10-2018 IPR000182 GNAT domain N288_18180 8f75e6523e8811bda1b8dfa653fa8366 123 Gene3D G3DSA:1.10.10.60 79 115 1.9E-5 T 12-10-2018 N288_14865 68a59e943bc90dc4cb2e922d01c9f715 164 Gene3D G3DSA:1.10.357.10 1 163 5.1E-41 T 12-10-2018 N288_14865 68a59e943bc90dc4cb2e922d01c9f715 164 SUPERFAMILY SSF48498 63 160 4.89E-18 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily N288_14865 68a59e943bc90dc4cb2e922d01c9f715 164 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 29 1.8E-4 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_14865 68a59e943bc90dc4cb2e922d01c9f715 164 SUPERFAMILY SSF46689 2 43 1.39E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_25245 2ce9e75d8656f645082cace97f8218fc 187 ProSitePatterns PS00893 Nudix box signature. 73 94 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_25245 2ce9e75d8656f645082cace97f8218fc 187 Gene3D G3DSA:3.90.79.10 37 172 1.4E-27 T 12-10-2018 N288_25245 2ce9e75d8656f645082cace97f8218fc 187 SUPERFAMILY SSF55811 17 144 1.1E-27 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_25245 2ce9e75d8656f645082cace97f8218fc 187 PRINTS PR00502 NUDIX hydrolase family signature 68 82 1.0E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_25245 2ce9e75d8656f645082cace97f8218fc 187 PRINTS PR00502 NUDIX hydrolase family signature 82 97 1.0E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 N288_25245 2ce9e75d8656f645082cace97f8218fc 187 Pfam PF00293 NUDIX domain 42 145 1.4E-17 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_21190 5178c45c3c0d66933b030ee0e5bf8d40 79 Pfam PF10830 Protein of unknown function (DUF2553) 6 79 5.9E-31 T 12-10-2018 IPR020140 Uncharacterised protein family YusG N288_21190 5178c45c3c0d66933b030ee0e5bf8d40 79 ProDom PD058325 YUSG BH3483 7 79 2.0E-12 T 12-10-2018 IPR020140 Uncharacterised protein family YusG N288_24030 d7289e91bbde508019f159dd32746647 74 Pfam PF07293 Protein of unknown function (DUF1450) 23 73 4.8E-7 T 12-10-2018 IPR009910 Protein of unknown function DUF1450 N288_24030 d7289e91bbde508019f159dd32746647 74 Hamap MF_01863 UPF0741 protein . 1 74 30.43 T 12-10-2018 IPR020880 Protein of unknown function UPF0741 N288_07885 4a26f4442777be213438fa110ac7113e 141 Pfam PF13673 Acetyltransferase (GNAT) domain 23 140 3.8E-20 T 12-10-2018 IPR000182 GNAT domain N288_07885 4a26f4442777be213438fa110ac7113e 141 Gene3D G3DSA:3.40.630.30 2 140 1.7E-37 T 12-10-2018 N288_07885 4a26f4442777be213438fa110ac7113e 141 SUPERFAMILY SSF55729 3 141 8.33E-32 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_09455 1564beab0c182ba91832c07e6a96517e 26 Pfam PF08183 Stage V sporulation protein family 1 25 9.6E-17 T 12-10-2018 IPR012609 Sporulation stage V, protein M N288_22540 9f705f5f6c7b09c99bed89c71aa576b2 233 Gene3D G3DSA:3.40.50.2020 1 143 5.2E-17 T 12-10-2018 N288_22540 9f705f5f6c7b09c99bed89c71aa576b2 233 Pfam PF00156 Phosphoribosyl transferase domain 71 126 8.9E-7 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 N288_22540 9f705f5f6c7b09c99bed89c71aa576b2 233 SUPERFAMILY SSF53271 2 127 2.13E-14 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like N288_17770 bdd2a5a4b5517a2b221c6bd01d3d1223 556 Pfam PF03961 Flagellar Assembly Protein A 104 547 2.6E-98 T 12-10-2018 IPR005646 Flagellar assembly protein A N288_04975 7d469f3a5f40c07a2d8f168c561d093d 166 Pfam PF12867 DinB superfamily 14 156 1.0E-12 T 12-10-2018 IPR024775 DinB-like domain N288_04975 7d469f3a5f40c07a2d8f168c561d093d 166 SUPERFAMILY SSF109854 6 156 4.4E-18 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_05780 f3369f08823378a48e8406599c647e5a 145 SUPERFAMILY SSF46785 8 138 1.51E-42 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_05780 f3369f08823378a48e8406599c647e5a 145 Gene3D G3DSA:3.30.1490.190 88 145 1.4E-24 T 12-10-2018 N288_05780 f3369f08823378a48e8406599c647e5a 145 Pfam PF01475 Ferric uptake regulator family 16 133 9.8E-41 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 N288_05780 f3369f08823378a48e8406599c647e5a 145 Gene3D G3DSA:1.10.10.10 1 87 3.0E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_00885 7244cead2b097a8ee4d336c9aa8e2c45 120 Pfam PF01196 Ribosomal protein L17 16 120 1.5E-39 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00885 7244cead2b097a8ee4d336c9aa8e2c45 120 Gene3D G3DSA:3.90.1030.10 1 120 3.9E-51 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00885 7244cead2b097a8ee4d336c9aa8e2c45 120 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 120 28.915 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00885 7244cead2b097a8ee4d336c9aa8e2c45 120 TIGRFAM TIGR00059 L17: ribosomal protein bL17 2 120 8.2E-49 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00885 7244cead2b097a8ee4d336c9aa8e2c45 120 SUPERFAMILY SSF64263 2 120 4.06E-45 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00885 7244cead2b097a8ee4d336c9aa8e2c45 120 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_10320 32cf30e4f55f6cd0766e4ac3eaa71de3 180 Pfam PF16800 IseA DL-endopeptidase inhibitor 27 178 6.9E-55 T 12-10-2018 IPR031841 DL-endopeptidase inhibitor IseA N288_10320 32cf30e4f55f6cd0766e4ac3eaa71de3 180 Gene3D G3DSA:3.10.450.420 23 180 1.1E-57 T 12-10-2018 N288_03525 10c1ca177e6e99f33c46b25b2f716499 393 Pfam PF14172 Domain of unknown function (DUF4309) 272 380 1.1E-6 T 12-10-2018 IPR025453 Protein of unknown function DUF4309 N288_20965 36632cc50cd0019c6f8c822f599358b0 77 Gene3D G3DSA:3.30.300.130 1 77 3.3E-32 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily N288_20965 36632cc50cd0019c6f8c822f599358b0 77 Pfam PF01106 NifU-like domain 9 74 4.3E-28 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 N288_20965 36632cc50cd0019c6f8c822f599358b0 77 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 13 64 2.0E-22 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 N288_20965 36632cc50cd0019c6f8c822f599358b0 77 SUPERFAMILY SSF117916 4 76 3.43E-26 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily N288_13625 5c3f2928c2d35ae77cc10d50eb6ddf60 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 1.2E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_13625 5c3f2928c2d35ae77cc10d50eb6ddf60 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 1.2E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_13625 5c3f2928c2d35ae77cc10d50eb6ddf60 213 Gene3D G3DSA:1.10.10.60 14 61 2.1E-15 T 12-10-2018 N288_13625 5c3f2928c2d35ae77cc10d50eb6ddf60 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 1.8E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 N288_13625 5c3f2928c2d35ae77cc10d50eb6ddf60 213 SUPERFAMILY SSF48498 127 196 3.0E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily N288_13625 5c3f2928c2d35ae77cc10d50eb6ddf60 213 Gene3D G3DSA:1.10.357.10 62 203 8.7E-9 T 12-10-2018 N288_13625 5c3f2928c2d35ae77cc10d50eb6ddf60 213 SUPERFAMILY SSF46689 14 76 2.82E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_07225 8c87ca3d1f3bcce2a1fdab1d5a8f8466 72 Pfam PF10676 Spore germination protein gerPA/gerPF 1 71 1.7E-27 T 12-10-2018 IPR019618 Spore germination protein GerPA/GerPF N288_20110 1a014afccbb4e63894a6ed34b52dfd6c 538 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 370 518 1.3E-28 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain N288_20110 1a014afccbb4e63894a6ed34b52dfd6c 538 Pfam PF01943 Polysaccharide biosynthesis protein 5 318 7.2E-49 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 N288_20110 1a014afccbb4e63894a6ed34b52dfd6c 538 PIRSF PIRSF038958 1 535 9.1E-126 T 12-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type N288_16910 c2d23a1b4440b862d187b743ed11b9d9 396 Gene3D G3DSA:1.10.110.30 145 239 3.6E-28 T 12-10-2018 N288_16910 c2d23a1b4440b862d187b743ed11b9d9 396 Hamap MF_01263 CCA-adding enzyme [cca]. 2 395 40.126 T 12-10-2018 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 N288_16910 c2d23a1b4440b862d187b743ed11b9d9 396 Gene3D G3DSA:1.20.58.560 245 338 1.1E-15 T 12-10-2018 N288_16910 c2d23a1b4440b862d187b743ed11b9d9 396 SUPERFAMILY SSF81301 7 139 4.14E-40 T 12-10-2018 N288_16910 c2d23a1b4440b862d187b743ed11b9d9 396 Pfam PF01743 Poly A polymerase head domain 22 141 3.8E-35 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 N288_16910 c2d23a1b4440b862d187b743ed11b9d9 396 Gene3D G3DSA:1.10.246.80 339 396 7.5E-22 T 12-10-2018 N288_16910 c2d23a1b4440b862d187b743ed11b9d9 396 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 170 227 2.1E-12 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 N288_16910 c2d23a1b4440b862d187b743ed11b9d9 396 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 247 388 6.0E-36 T 12-10-2018 IPR032810 CCA-adding enzyme, C-terminal N288_16910 c2d23a1b4440b862d187b743ed11b9d9 396 SUPERFAMILY SSF81891 140 392 4.84E-47 T 12-10-2018 N288_16910 c2d23a1b4440b862d187b743ed11b9d9 396 Gene3D G3DSA:3.30.460.10 2 144 4.7E-51 T 12-10-2018 N288_08775 41e5384452d5f61897591b2797f55242 44 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 19 42 1.8E-14 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like N288_08775 41e5384452d5f61897591b2797f55242 44 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 17 40 4.3E-14 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like N288_18335 2385da07cccc63cf924caa6e3c3cf9d7 379 PIRSF PIRSF016578 4 110 8.9E-8 T 12-10-2018 N288_18335 2385da07cccc63cf924caa6e3c3cf9d7 379 PIRSF PIRSF016578 134 378 2.4E-19 T 12-10-2018 N288_18335 2385da07cccc63cf924caa6e3c3cf9d7 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 2.0E-24 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 N288_18335 2385da07cccc63cf924caa6e3c3cf9d7 379 SUPERFAMILY SSF56645 1 242 3.93E-80 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 N288_18335 2385da07cccc63cf924caa6e3c3cf9d7 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 1.8E-56 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 N288_18335 2385da07cccc63cf924caa6e3c3cf9d7 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 N288_18335 2385da07cccc63cf924caa6e3c3cf9d7 379 Gene3D G3DSA:1.20.140.10 235 378 2.2E-59 T 12-10-2018 N288_18335 2385da07cccc63cf924caa6e3c3cf9d7 379 Gene3D G3DSA:2.40.110.10 121 234 2.0E-36 T 12-10-2018 N288_18335 2385da07cccc63cf924caa6e3c3cf9d7 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 N288_18335 2385da07cccc63cf924caa6e3c3cf9d7 379 Gene3D G3DSA:1.10.540.10 1 119 3.2E-43 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 N288_18335 2385da07cccc63cf924caa6e3c3cf9d7 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 2.2E-36 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 N288_18335 2385da07cccc63cf924caa6e3c3cf9d7 379 SUPERFAMILY SSF47203 228 377 5.09E-62 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 N288_18315 945e45fbc1bd6992f2bdb2a995390d33 313 Gene3D G3DSA:3.40.1010.20 104 197 8.7E-94 T 12-10-2018 N288_18315 945e45fbc1bd6992f2bdb2a995390d33 313 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 32.228 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 N288_18315 945e45fbc1bd6992f2bdb2a995390d33 313 Gene3D G3DSA:3.40.1010.20 7 284 8.7E-94 T 12-10-2018 N288_18315 945e45fbc1bd6992f2bdb2a995390d33 313 Gene3D G3DSA:3.40.50.11270 12 103 8.7E-94 T 12-10-2018 N288_18315 945e45fbc1bd6992f2bdb2a995390d33 313 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 287 9.7E-89 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 N288_18315 945e45fbc1bd6992f2bdb2a995390d33 313 Pfam PF02401 LytB protein 5 284 2.6E-79 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 N288_08945 f616a230136e6e481bc78d87d33ddde0 325 Pfam PF02628 Cytochrome oxidase assembly protein 7 286 3.2E-35 T 12-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 N288_08945 f616a230136e6e481bc78d87d33ddde0 325 Hamap MF_01664 Heme A synthase [ctaA]. 1 302 30.778 T 12-10-2018 IPR023755 Heme A synthase, type 1 GO:0006784|GO:0016020|GO:0016627|GO:0055114 N288_13200 9faf031c8b238c1711d402d8701e6d9a 215 Pfam PF03006 Haemolysin-III related 4 207 6.8E-44 T 12-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 N288_13200 9faf031c8b238c1711d402d8701e6d9a 215 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 7 214 2.9E-60 T 12-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 N288_24440 7f4a0b5e7a9c7116f4b49b015451b48e 266 Pfam PF01380 SIS domain 125 252 1.9E-16 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 N288_24440 7f4a0b5e7a9c7116f4b49b015451b48e 266 Pfam PF01418 Helix-turn-helix domain, rpiR family 15 73 1.7E-11 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 N288_24440 7f4a0b5e7a9c7116f4b49b015451b48e 266 SUPERFAMILY SSF53697 100 263 1.44E-27 T 12-10-2018 N288_24440 7f4a0b5e7a9c7116f4b49b015451b48e 266 Gene3D G3DSA:1.10.10.10 10 79 3.0E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_24440 7f4a0b5e7a9c7116f4b49b015451b48e 266 SUPERFAMILY SSF46689 16 75 1.04E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_24440 7f4a0b5e7a9c7116f4b49b015451b48e 266 Gene3D G3DSA:3.40.50.10490 95 265 3.2E-31 T 12-10-2018 N288_02910 a879caed4581a4760a53d860c0731f49 274 Gene3D G3DSA:3.40.50.150 6 265 2.5E-70 T 12-10-2018 N288_02910 a879caed4581a4760a53d860c0731f49 274 Pfam PF13649 Methyltransferase domain 48 150 2.1E-9 T 12-10-2018 N288_02910 a879caed4581a4760a53d860c0731f49 274 SUPERFAMILY SSF53335 22 235 1.86E-24 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_00820 c9f99ab35b5cbfb8c45a900c4010f760 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 120 30.264 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_00820 c9f99ab35b5cbfb8c45a900c4010f760 120 Gene3D G3DSA:3.30.420.100 5 120 9.5E-47 T 12-10-2018 N288_00820 c9f99ab35b5cbfb8c45a900c4010f760 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 120 6.2E-52 T 12-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_00820 c9f99ab35b5cbfb8c45a900c4010f760 120 SUPERFAMILY SSF53137 7 118 7.63E-55 T 12-10-2018 N288_00820 c9f99ab35b5cbfb8c45a900c4010f760 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 120 6.8E-48 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 N288_13420 e058f9dd014db689d161cf745922d0cf 540 SUPERFAMILY SSF53850 38 533 4.52E-136 T 12-10-2018 N288_13420 e058f9dd014db689d161cf745922d0cf 540 Gene3D G3DSA:3.90.76.10 70 192 3.5E-170 T 12-10-2018 N288_13420 e058f9dd014db689d161cf745922d0cf 540 Gene3D G3DSA:3.10.105.10 293 511 3.5E-170 T 12-10-2018 N288_13420 e058f9dd014db689d161cf745922d0cf 540 PIRSF PIRSF002741 1 539 4.9E-125 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 N288_13420 e058f9dd014db689d161cf745922d0cf 540 Gene3D G3DSA:3.40.190.10 50 523 3.5E-170 T 12-10-2018 N288_13420 e058f9dd014db689d161cf745922d0cf 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 461 3.5E-81 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain N288_01205 5af47231d1c9745b8f57508003418e68 440 Gene3D G3DSA:2.60.40.1630 78 226 1.4E-6 T 12-10-2018 N288_01205 5af47231d1c9745b8f57508003418e68 440 Pfam PF13786 Domain of unknown function (DUF4179) 47 139 3.7E-19 T 12-10-2018 IPR025436 Domain of unknown function DUF4179 N288_25025 25f93bb51d70035c30ca5f3bbf1aa1d3 182 Pfam PF13302 Acetyltransferase (GNAT) domain 47 159 8.0E-11 T 12-10-2018 IPR000182 GNAT domain N288_25025 25f93bb51d70035c30ca5f3bbf1aa1d3 182 Gene3D G3DSA:3.40.630.30 21 161 4.6E-21 T 12-10-2018 N288_25025 25f93bb51d70035c30ca5f3bbf1aa1d3 182 SUPERFAMILY SSF55729 45 165 3.99E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_05505 889b154a2baf69347144b55069f99294 280 Pfam PF00149 Calcineurin-like phosphoesterase 1 196 1.8E-14 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 N288_05505 889b154a2baf69347144b55069f99294 280 Gene3D G3DSA:3.60.21.10 1 247 8.6E-25 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_05505 889b154a2baf69347144b55069f99294 280 SUPERFAMILY SSF56300 1 241 5.32E-38 T 12-10-2018 N288_21200 05860a33938507fd7ae1f736fa27cc14 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 117 1.6E-35 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR N288_21200 05860a33938507fd7ae1f736fa27cc14 118 Gene3D G3DSA:3.40.30.10 2 116 9.8E-47 T 12-10-2018 N288_21200 05860a33938507fd7ae1f736fa27cc14 118 SUPERFAMILY SSF52833 5 117 1.24E-36 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_21200 05860a33938507fd7ae1f736fa27cc14 118 Pfam PF03960 ArsC family 6 115 1.8E-16 T 12-10-2018 IPR006660 Arsenate reductase-like N288_14180 3bc05d5a8d10b22a9f45f5604de8645d 431 Pfam PF13416 Bacterial extracellular solute-binding protein 55 363 8.8E-34 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein N288_14180 3bc05d5a8d10b22a9f45f5604de8645d 431 Gene3D G3DSA:3.40.190.10 153 413 1.8E-73 T 12-10-2018 N288_14180 3bc05d5a8d10b22a9f45f5604de8645d 431 SUPERFAMILY SSF53850 24 430 7.91E-53 T 12-10-2018 N288_14180 3bc05d5a8d10b22a9f45f5604de8645d 431 Gene3D G3DSA:3.40.190.10 58 357 1.8E-73 T 12-10-2018 N288_10120 ddb8ba8e1850ca6e4e6b30baa3d1983b 301 Gene3D G3DSA:1.10.260.40 1 102 3.0E-29 T 12-10-2018 N288_10120 ddb8ba8e1850ca6e4e6b30baa3d1983b 301 SUPERFAMILY SSF47413 2 76 4.1E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_10120 ddb8ba8e1850ca6e4e6b30baa3d1983b 301 Pfam PF13413 Helix-turn-helix domain 8 68 1.8E-20 T 12-10-2018 N288_10120 ddb8ba8e1850ca6e4e6b30baa3d1983b 301 Pfam PF13464 Domain of unknown function (DUF4115) 216 283 2.2E-7 T 12-10-2018 IPR025194 Domain of unknown function DUF4115 N288_19175 751b1fe1296134f2dd486bc8a08f788f 429 SUPERFAMILY SSF54106 379 424 2.35E-8 T 12-10-2018 N288_19175 751b1fe1296134f2dd486bc8a08f788f 429 SMART SM00257 379 423 9.4E-6 T 12-10-2018 IPR018392 LysM domain N288_19175 751b1fe1296134f2dd486bc8a08f788f 429 Gene3D G3DSA:3.10.350.10 367 429 3.1E-12 T 12-10-2018 IPR036779 LysM domain superfamily N288_19175 751b1fe1296134f2dd486bc8a08f788f 429 TIGRFAM TIGR02907 spore_VI_D: stage VI sporulation protein D 9 199 1.0E-51 T 12-10-2018 IPR014256 Sporulation stage VI, protein D N288_19175 751b1fe1296134f2dd486bc8a08f788f 429 Pfam PF01476 LysM domain 381 423 5.1E-7 T 12-10-2018 IPR018392 LysM domain N288_18940 40bc0baecb863382707214d050521836 504 Gene3D G3DSA:3.10.350.10 1 56 4.9E-17 T 12-10-2018 IPR036779 LysM domain superfamily N288_18940 40bc0baecb863382707214d050521836 504 Pfam PF01476 LysM domain 4 48 2.3E-16 T 12-10-2018 IPR018392 LysM domain N288_18940 40bc0baecb863382707214d050521836 504 TIGRFAM TIGR02899 spore_safA: spore coat assembly protein SafA 6 49 8.9E-27 T 12-10-2018 IPR014248 Spore coat assembly protein SafA N288_18940 40bc0baecb863382707214d050521836 504 SMART SM00257 3 48 1.5E-18 T 12-10-2018 IPR018392 LysM domain N288_18940 40bc0baecb863382707214d050521836 504 SUPERFAMILY SSF54106 2 48 2.35E-12 T 12-10-2018 N288_03805 0e09df1e96e583e3be36ea77d24ed42e 153 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 18 143 7.4E-12 T 12-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain N288_03805 0e09df1e96e583e3be36ea77d24ed42e 153 Gene3D G3DSA:2.30.110.10 17 151 4.4E-31 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 N288_03805 0e09df1e96e583e3be36ea77d24ed42e 153 SUPERFAMILY SSF50475 16 141 8.23E-26 T 12-10-2018 N288_15800 c827737d2573779544c94d3ca5627397 207 Pfam PF01810 LysE type translocator 12 201 1.2E-38 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 N288_18270 2e040896c5e5efa44b69f36f041b6925 189 SUPERFAMILY SSF56784 2 161 1.59E-17 T 12-10-2018 IPR036412 HAD-like superfamily N288_18270 2e040896c5e5efa44b69f36f041b6925 189 PIRSF PIRSF021362 1 189 8.1E-68 T 12-10-2018 IPR009206 Nucleotidase, putative N288_18270 2e040896c5e5efa44b69f36f041b6925 189 Gene3D G3DSA:3.40.50.1000 1 156 1.6E-9 T 12-10-2018 IPR023214 HAD superfamily N288_11580 18c0bfabbb46b373a2a9967c0c8738cc 382 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 380 5.7E-139 T 12-10-2018 IPR002155 Thiolase GO:0016747 N288_11580 18c0bfabbb46b373a2a9967c0c8738cc 382 Pfam PF00108 Thiolase, N-terminal domain 5 252 5.0E-78 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 N288_11580 18c0bfabbb46b373a2a9967c0c8738cc 382 Pfam PF02803 Thiolase, C-terminal domain 261 381 3.9E-42 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 N288_11580 18c0bfabbb46b373a2a9967c0c8738cc 382 Gene3D G3DSA:3.40.47.10 127 379 5.4E-149 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_11580 18c0bfabbb46b373a2a9967c0c8738cc 382 SUPERFAMILY SSF53901 1 256 3.51E-78 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_11580 18c0bfabbb46b373a2a9967c0c8738cc 382 Gene3D G3DSA:3.40.47.10 6 265 5.4E-149 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_11580 18c0bfabbb46b373a2a9967c0c8738cc 382 ProSitePatterns PS00737 Thiolases signature 2. 328 344 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 N288_11580 18c0bfabbb46b373a2a9967c0c8738cc 382 PIRSF PIRSF000429 1 382 4.8E-130 T 12-10-2018 IPR002155 Thiolase GO:0016747 N288_11580 18c0bfabbb46b373a2a9967c0c8738cc 382 SUPERFAMILY SSF53901 261 381 6.47E-42 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_19065 0731e9201c9521e7ac7cdcb0557522cb 371 Gene3D G3DSA:3.30.70.1070 190 258 2.2E-5 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 N288_19065 0731e9201c9521e7ac7cdcb0557522cb 371 SUPERFAMILY SSF110997 190 255 4.58E-6 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 N288_13545 6d4883f4639d0589c5f7eb38b5633906 120 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 118 16.852 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 N288_13545 6d4883f4639d0589c5f7eb38b5633906 120 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 113 1.3E-23 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 N288_09420 e4f36ab3db839484c1aa479c1ab8812b 448 SUPERFAMILY SSF48013 4 129 8.63E-36 T 12-10-2018 IPR035926 NusB-like superfamily N288_09420 e4f36ab3db839484c1aa479c1ab8812b 448 Pfam PF01029 NusB family 5 128 7.1E-31 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 N288_09420 e4f36ab3db839484c1aa479c1ab8812b 448 Gene3D G3DSA:1.10.940.10 1 144 6.9E-41 T 12-10-2018 IPR035926 NusB-like superfamily N288_09420 e4f36ab3db839484c1aa479c1ab8812b 448 Pfam PF01189 16S rRNA methyltransferase RsmB/F 245 444 3.7E-61 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 N288_09420 e4f36ab3db839484c1aa479c1ab8812b 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 374 390 2.0E-32 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase N288_09420 e4f36ab3db839484c1aa479c1ab8812b 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 227 241 2.0E-32 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase N288_09420 e4f36ab3db839484c1aa479c1ab8812b 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 256 266 2.0E-32 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase N288_09420 e4f36ab3db839484c1aa479c1ab8812b 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 428 445 2.0E-32 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase N288_09420 e4f36ab3db839484c1aa479c1ab8812b 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 324 336 2.0E-32 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase N288_09420 e4f36ab3db839484c1aa479c1ab8812b 448 Gene3D G3DSA:3.40.50.150 145 445 1.3E-83 T 12-10-2018 N288_09420 e4f36ab3db839484c1aa479c1ab8812b 448 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 7 446 9.0E-154 T 12-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 N288_09420 e4f36ab3db839484c1aa479c1ab8812b 448 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 323 334 - T 12-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 N288_09420 e4f36ab3db839484c1aa479c1ab8812b 448 SUPERFAMILY SSF53335 139 446 4.56E-72 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_07515 e7cbc8c7e5cb2ce182a34e4ea42f01aa 59 Pfam PF14168 YjzC-like protein 1 55 1.7E-28 T 12-10-2018 IPR025549 YjzC-like protein N288_25525 d380cfa11ff9ade6b4f577f4bf950dbe 154 Pfam PF04892 VanZ like family 13 145 4.2E-24 T 12-10-2018 IPR006976 VanZ-like N288_08385 e39dd5243ce1b93d4026ae34e21983d8 258 SUPERFAMILY SSF56317 1 258 1.83E-76 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily N288_08385 e39dd5243ce1b93d4026ae34e21983d8 258 Pfam PF00795 Carbon-nitrogen hydrolase 3 244 2.1E-47 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 N288_08385 e39dd5243ce1b93d4026ae34e21983d8 258 Gene3D G3DSA:3.60.110.10 1 258 1.4E-92 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily N288_14095 1b3c768c7ae338f27b6ea2fc806191e6 622 Pfam PF00884 Sulfatase 253 541 1.1E-31 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 N288_14095 1b3c768c7ae338f27b6ea2fc806191e6 622 PIRSF PIRSF005091 6 622 4.8E-156 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like N288_14095 1b3c768c7ae338f27b6ea2fc806191e6 622 SUPERFAMILY SSF53649 251 620 1.8E-58 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 N288_14095 1b3c768c7ae338f27b6ea2fc806191e6 622 Gene3D G3DSA:3.40.720.10 244 550 2.4E-67 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 N288_01280 6b5f9ce4024dd5e5ac36c1bfddcc332a 323 Gene3D G3DSA:3.40.50.1980 29 184 2.9E-37 T 12-10-2018 N288_01280 6b5f9ce4024dd5e5ac36c1bfddcc332a 323 Pfam PF01497 Periplasmic binding protein 69 297 9.7E-42 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain N288_01280 6b5f9ce4024dd5e5ac36c1bfddcc332a 323 SUPERFAMILY SSF53807 46 319 2.18E-70 T 12-10-2018 N288_01280 6b5f9ce4024dd5e5ac36c1bfddcc332a 323 Gene3D G3DSA:3.40.50.1980 188 320 3.0E-43 T 12-10-2018 N288_23745 cfc6a7edea55627a7f806cad6f7bc705 328 Pfam PF08378 Nuclease-related domain 41 152 1.4E-18 T 12-10-2018 IPR011528 Nuclease-related domain, NERD N288_22245 2294603effd3d9e4a8ac77780862ab99 243 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 9 234 7.1E-46 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 N288_22245 2294603effd3d9e4a8ac77780862ab99 243 Gene3D G3DSA:3.20.20.190 1 242 2.1E-89 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 N288_22245 2294603effd3d9e4a8ac77780862ab99 243 SUPERFAMILY SSF51695 3 240 4.45E-77 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 N288_04055 9284816b0adf14c0c0a83385fd029696 139 Gene3D G3DSA:3.40.960.10 21 139 6.8E-38 T 12-10-2018 N288_04055 9284816b0adf14c0c0a83385fd029696 139 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 4 116 7.5E-36 T 12-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 N288_04055 9284816b0adf14c0c0a83385fd029696 139 PIRSF PIRSF018267 1 139 1.2E-43 T 12-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 N288_04055 9284816b0adf14c0c0a83385fd029696 139 SUPERFAMILY SSF52980 6 134 1.47E-40 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 N288_04055 9284816b0adf14c0c0a83385fd029696 139 Pfam PF03852 DNA mismatch endonuclease Vsr 7 68 6.5E-18 T 12-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 N288_02615 d2048f58e2d26d96c214507dcb073332 243 Pfam PF02535 ZIP Zinc transporter 101 237 3.2E-15 T 12-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 N288_05935 16883e4be7284487192c26a8fa7038e5 221 Pfam PF03483 B3/4 domain 64 182 5.4E-18 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 N288_05935 16883e4be7284487192c26a8fa7038e5 221 SUPERFAMILY SSF56037 60 215 1.41E-28 T 12-10-2018 N288_05935 16883e4be7284487192c26a8fa7038e5 221 SMART SM00873 62 212 2.2E-10 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 N288_05935 16883e4be7284487192c26a8fa7038e5 221 Gene3D G3DSA:3.50.40.10 73 202 1.8E-8 T 12-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 N288_07840 dc3f2f9f0cfb8677746a7a16df7c6166 355 Pfam PF01636 Phosphotransferase enzyme family 39 266 1.2E-34 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase N288_07840 dc3f2f9f0cfb8677746a7a16df7c6166 355 SUPERFAMILY SSF56112 15 341 5.39E-53 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_07840 dc3f2f9f0cfb8677746a7a16df7c6166 355 Gene3D G3DSA:3.30.200.20 15 116 1.0E-25 T 12-10-2018 N288_07840 dc3f2f9f0cfb8677746a7a16df7c6166 355 Gene3D G3DSA:3.90.1200.10 120 354 1.4E-59 T 12-10-2018 N288_16275 3f49a93de6573be15d1ae92008d34b81 254 Pfam PF14344 Domain of unknown function (DUF4397) 65 178 1.9E-38 T 12-10-2018 IPR025510 Domain of unknown function DUF4397 N288_03465 d49230986e84d638246edaf763bd6da8 160 Pfam PF13673 Acetyltransferase (GNAT) domain 43 140 1.9E-13 T 12-10-2018 IPR000182 GNAT domain N288_03465 d49230986e84d638246edaf763bd6da8 160 Gene3D G3DSA:3.40.630.30 1 142 4.1E-24 T 12-10-2018 N288_03465 d49230986e84d638246edaf763bd6da8 160 SUPERFAMILY SSF55729 1 157 1.34E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_15590 026b21a0fc5649ce445661544f7a07b0 253 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 241 6.2E-26 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_15590 026b21a0fc5649ce445661544f7a07b0 253 Gene3D G3DSA:1.10.3720.10 47 245 1.7E-30 T 12-10-2018 IPR035906 MetI-like superfamily N288_15590 026b21a0fc5649ce445661544f7a07b0 253 SUPERFAMILY SSF161098 49 232 4.32E-32 T 12-10-2018 IPR035906 MetI-like superfamily N288_22390 2266a4c6a659111777b80698d3355022 438 SUPERFAMILY SSF53850 27 434 1.43E-38 T 12-10-2018 N288_22390 2266a4c6a659111777b80698d3355022 438 Gene3D G3DSA:3.40.190.10 59 379 5.7E-50 T 12-10-2018 N288_22390 2266a4c6a659111777b80698d3355022 438 Gene3D G3DSA:3.40.190.10 151 398 5.7E-50 T 12-10-2018 N288_01125 bd1a219e9c237f28fc268cf8aa7aaff4 207 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 196 7.5E-42 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 N288_01125 bd1a219e9c237f28fc268cf8aa7aaff4 207 PIRSF PIRSF000709 3 152 2.9E-13 T 12-10-2018 N288_01125 bd1a219e9c237f28fc268cf8aa7aaff4 207 SMART SM00855 3 158 9.7E-19 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 N288_01125 bd1a219e9c237f28fc268cf8aa7aaff4 207 Gene3D G3DSA:3.40.50.1240 1 206 9.8E-46 T 12-10-2018 IPR029033 Histidine phosphatase superfamily N288_01125 bd1a219e9c237f28fc268cf8aa7aaff4 207 SUPERFAMILY SSF53254 1 203 1.44E-45 T 12-10-2018 IPR029033 Histidine phosphatase superfamily N288_13385 b7c65ca4de09157dd365224f07d6f23f 284 Pfam PF06800 Sugar transport protein 5 281 8.4E-97 T 12-10-2018 IPR010651 Sugar transport protein GO:0015144|GO:0016021|GO:0034219 N288_13385 b7c65ca4de09157dd365224f07d6f23f 284 SUPERFAMILY SSF103481 38 139 1.28E-8 T 12-10-2018 N288_13385 b7c65ca4de09157dd365224f07d6f23f 284 SUPERFAMILY SSF103481 204 281 2.09E-5 T 12-10-2018 N288_02995 b38c3412abc24c81bdd94eb1b48640d5 170 Gene3D G3DSA:3.40.630.30 1 147 4.0E-11 T 12-10-2018 N288_02995 b38c3412abc24c81bdd94eb1b48640d5 170 Pfam PF00583 Acetyltransferase (GNAT) family 47 139 7.4E-7 T 12-10-2018 IPR000182 GNAT domain N288_02995 b38c3412abc24c81bdd94eb1b48640d5 170 SUPERFAMILY SSF55729 11 139 2.13E-11 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 Gene3D G3DSA:2.30.210.10 572 588 9.2E-280 T 12-10-2018 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 Pfam PF08264 Anticodon-binding domain of tRNA 656 764 2.3E-21 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 Gene3D G3DSA:1.10.730.10 599 741 1.3E-48 T 12-10-2018 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 3.3E-58 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 PRINTS PR00985 Leucyl-tRNA synthetase signature 152 168 3.3E-58 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 3.3E-58 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 PRINTS PR00985 Leucyl-tRNA synthetase signature 184 197 3.3E-58 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 3.3E-58 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 PRINTS PR00985 Leucyl-tRNA synthetase signature 213 232 3.3E-58 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 3.3E-58 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 SUPERFAMILY SSF47323 618 804 9.16E-41 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 412 603 3.3E-19 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 804 23.422 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 Gene3D G3DSA:3.90.740.10 226 410 9.2E-280 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 Gene3D G3DSA:3.40.50.620 33 571 9.2E-280 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 Gene3D G3DSA:3.10.20.590 745 804 2.3E-21 T 12-10-2018 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 219 399 3.0E-69 T 12-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 Pfam PF09334 tRNA synthetases class I (M) 39 169 2.6E-18 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 SUPERFAMILY SSF52374 2 625 2.35E-145 T 12-10-2018 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 804 0.0 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 N288_20130 b51ab900ffdf424c9b39da7a6a1207e8 805 SUPERFAMILY SSF50677 224 410 7.01E-57 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 N288_23725 e31d9f78a811b903766567487794d12b 236 PRINTS PR00123 ATP synthase A subunit signature 162 184 3.0E-16 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23725 e31d9f78a811b903766567487794d12b 236 PRINTS PR00123 ATP synthase A subunit signature 215 230 3.0E-16 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23725 e31d9f78a811b903766567487794d12b 236 PRINTS PR00123 ATP synthase A subunit signature 78 94 3.0E-16 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23725 e31d9f78a811b903766567487794d12b 236 Gene3D G3DSA:1.20.120.220 72 236 9.0E-42 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23725 e31d9f78a811b903766567487794d12b 236 ProSitePatterns PS00449 ATP synthase a subunit signature. 165 174 - T 12-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23725 e31d9f78a811b903766567487794d12b 236 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 15 231 1.4E-48 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23725 e31d9f78a811b903766567487794d12b 236 Hamap MF_01393 ATP synthase subunit a [atpB]. 8 235 13.531 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23725 e31d9f78a811b903766567487794d12b 236 Pfam PF00119 ATP synthase A chain 20 229 3.4E-58 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_23725 e31d9f78a811b903766567487794d12b 236 SUPERFAMILY SSF81336 70 229 5.49E-41 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 N288_02640 645cceacd196a9bbd8694721b53f233d 479 Pfam PF12849 PBP superfamily domain 225 460 4.0E-20 T 12-10-2018 IPR024370 PBP domain N288_02640 645cceacd196a9bbd8694721b53f233d 479 SUPERFAMILY SSF53850 223 475 5.35E-50 T 12-10-2018 N288_02640 645cceacd196a9bbd8694721b53f233d 479 Gene3D G3DSA:3.40.190.10 302 438 1.4E-58 T 12-10-2018 N288_02640 645cceacd196a9bbd8694721b53f233d 479 Gene3D G3DSA:3.40.190.10 223 474 1.4E-58 T 12-10-2018 N288_11915 0015e67aecc7def2304cacac688e813b 470 SUPERFAMILY SSF54373 300 408 1.64E-14 T 12-10-2018 N288_11915 0015e67aecc7def2304cacac688e813b 470 Gene3D G3DSA:3.90.660.10 46 406 5.4E-94 T 12-10-2018 N288_11915 0015e67aecc7def2304cacac688e813b 470 PRINTS PR00757 Flavin-containing amine oxidase signature 439 456 3.1E-7 T 12-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 N288_11915 0015e67aecc7def2304cacac688e813b 470 PRINTS PR00757 Flavin-containing amine oxidase signature 10 29 3.1E-7 T 12-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 N288_11915 0015e67aecc7def2304cacac688e813b 470 PRINTS PR00757 Flavin-containing amine oxidase signature 304 323 3.1E-7 T 12-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 N288_11915 0015e67aecc7def2304cacac688e813b 470 Pfam PF01593 Flavin containing amine oxidoreductase 18 456 3.7E-53 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 N288_11915 0015e67aecc7def2304cacac688e813b 470 SUPERFAMILY SSF51905 6 457 2.29E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_11915 0015e67aecc7def2304cacac688e813b 470 Gene3D G3DSA:1.10.405.10 115 206 5.4E-94 T 12-10-2018 N288_11915 0015e67aecc7def2304cacac688e813b 470 Gene3D G3DSA:3.50.50.60 11 454 5.4E-94 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_02300 e4ad710c18ab6306bd5719ed7807cc76 160 Pfam PF12867 DinB superfamily 20 146 9.1E-9 T 12-10-2018 IPR024775 DinB-like domain N288_02300 e4ad710c18ab6306bd5719ed7807cc76 160 SUPERFAMILY SSF109854 16 149 3.82E-15 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_02300 e4ad710c18ab6306bd5719ed7807cc76 160 Gene3D G3DSA:1.20.120.450 7 156 4.5E-20 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_08260 3a94b75f7f04708dc292de151f2193ed 307 Pfam PF00563 EAL domain 64 295 3.4E-55 T 12-10-2018 IPR001633 EAL domain N288_08260 3a94b75f7f04708dc292de151f2193ed 307 SMART SM00052 58 300 2.5E-44 T 12-10-2018 IPR001633 EAL domain N288_08260 3a94b75f7f04708dc292de151f2193ed 307 SUPERFAMILY SSF141868 63 296 1.83E-65 T 12-10-2018 IPR035919 EAL domain superfamily N288_08260 3a94b75f7f04708dc292de151f2193ed 307 Gene3D G3DSA:3.20.20.450 47 306 5.4E-66 T 12-10-2018 IPR035919 EAL domain superfamily N288_09360 e3e9c16e26ca996176ce88d3d3a4ce12 211 SUPERFAMILY SSF53271 2 205 1.04E-51 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like N288_09360 e3e9c16e26ca996176ce88d3d3a4ce12 211 Pfam PF00156 Phosphoribosyl transferase domain 45 150 1.9E-18 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 N288_09360 e3e9c16e26ca996176ce88d3d3a4ce12 211 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 8 176 6.1E-49 T 12-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_09360 e3e9c16e26ca996176ce88d3d3a4ce12 211 Gene3D G3DSA:3.40.50.2020 1 211 3.3E-65 T 12-10-2018 N288_09360 e3e9c16e26ca996176ce88d3d3a4ce12 211 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 211 30.17 T 12-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 N288_02275 b3749406f6798c67183dd12f003c7ed1 352 Gene3D G3DSA:3.90.420.10 1 240 2.5E-69 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 N288_02275 b3749406f6798c67183dd12f003c7ed1 352 Pfam PF00174 Oxidoreductase molybdopterin binding domain 42 214 7.6E-50 T 12-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 N288_02275 b3749406f6798c67183dd12f003c7ed1 352 Gene3D G3DSA:2.60.40.650 241 352 8.8E-35 T 12-10-2018 N288_02275 b3749406f6798c67183dd12f003c7ed1 352 SUPERFAMILY SSF81296 239 351 2.31E-31 T 12-10-2018 IPR014756 Immunoglobulin E-set N288_02275 b3749406f6798c67183dd12f003c7ed1 352 PRINTS PR00407 Eukaryotic molybdopterin domain signature 106 121 5.6E-20 T 12-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 N288_02275 b3749406f6798c67183dd12f003c7ed1 352 PRINTS PR00407 Eukaryotic molybdopterin domain signature 319 331 5.6E-20 T 12-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 N288_02275 b3749406f6798c67183dd12f003c7ed1 352 PRINTS PR00407 Eukaryotic molybdopterin domain signature 195 208 5.6E-20 T 12-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 N288_02275 b3749406f6798c67183dd12f003c7ed1 352 PRINTS PR00407 Eukaryotic molybdopterin domain signature 274 286 5.6E-20 T 12-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 N288_02275 b3749406f6798c67183dd12f003c7ed1 352 PRINTS PR00407 Eukaryotic molybdopterin domain signature 162 178 5.6E-20 T 12-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 N288_02275 b3749406f6798c67183dd12f003c7ed1 352 PRINTS PR00407 Eukaryotic molybdopterin domain signature 10 24 5.6E-20 T 12-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 N288_02275 b3749406f6798c67183dd12f003c7ed1 352 PRINTS PR00407 Eukaryotic molybdopterin domain signature 30 46 5.6E-20 T 12-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 N288_02275 b3749406f6798c67183dd12f003c7ed1 352 PRINTS PR00407 Eukaryotic molybdopterin domain signature 179 192 5.6E-20 T 12-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 N288_02275 b3749406f6798c67183dd12f003c7ed1 352 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 236 338 1.2E-14 T 12-10-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 N288_02275 b3749406f6798c67183dd12f003c7ed1 352 SUPERFAMILY SSF56524 7 227 4.71E-62 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 N288_12045 db2c6713fca6e1d74fe42ad1b586d779 269 SUPERFAMILY SSF54060 116 259 4.71E-38 T 12-10-2018 N288_12045 db2c6713fca6e1d74fe42ad1b586d779 269 Pfam PF04231 Endonuclease I 51 259 2.7E-32 T 12-10-2018 IPR007346 Endonuclease I GO:0004518 N288_04570 deb6bfe7b84130fe9de963961279d8f5 256 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 12 248 4.0E-82 T 12-10-2018 IPR022493 Integral membrane YkoY N288_04570 deb6bfe7b84130fe9de963961279d8f5 256 Pfam PF03741 Integral membrane protein TerC family 15 207 2.7E-47 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 N288_02475 f66a28f6af4064453bf1273302a75f91 237 Gene3D G3DSA:2.60.120.620 21 233 2.4E-9 T 12-10-2018 N288_02475 f66a28f6af4064453bf1273302a75f91 237 Pfam PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA 65 236 3.3E-79 T 12-10-2018 IPR018655 Protein of unknown function DUF2086 N288_05130 36d3db632826d3bf4842559b401717e9 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 265 2.3E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_05130 36d3db632826d3bf4842559b401717e9 273 SUPERFAMILY SSF161098 5 273 1.12E-72 T 12-10-2018 IPR035906 MetI-like superfamily N288_05130 36d3db632826d3bf4842559b401717e9 273 Gene3D G3DSA:1.10.3720.10 1 265 2.1E-68 T 12-10-2018 IPR035906 MetI-like superfamily N288_07855 49d19f0728dee111f7f59924424d9b85 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 N288_07855 49d19f0728dee111f7f59924424d9b85 259 SUPERFAMILY SSF52096 1 258 5.86E-85 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_07855 49d19f0728dee111f7f59924424d9b85 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 258 3.2E-67 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 N288_07855 49d19f0728dee111f7f59924424d9b85 259 Gene3D G3DSA:3.90.226.10 1 200 1.3E-67 T 12-10-2018 N288_07855 49d19f0728dee111f7f59924424d9b85 259 Gene3D G3DSA:1.10.12.10 202 259 4.0E-20 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal N288_19930 a12e117817d37f1aae413670b75b82f6 719 Gene3D G3DSA:3.30.1490.110 81 176 8.2E-38 T 12-10-2018 N288_19930 a12e117817d37f1aae413670b75b82f6 719 SUPERFAMILY SSF53067 6 199 1.75E-23 T 12-10-2018 N288_19930 a12e117817d37f1aae413670b75b82f6 719 SMART SM00842 6 203 1.2E-53 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 N288_19930 a12e117817d37f1aae413670b75b82f6 719 Pfam PF14450 Cell division protein FtsA 214 342 1.7E-8 T 12-10-2018 N288_19930 a12e117817d37f1aae413670b75b82f6 719 SUPERFAMILY SSF53067 210 382 3.21E-30 T 12-10-2018 N288_19930 a12e117817d37f1aae413670b75b82f6 719 Gene3D G3DSA:3.30.420.40 204 350 8.2E-38 T 12-10-2018 N288_19930 a12e117817d37f1aae413670b75b82f6 719 Gene3D G3DSA:3.30.420.40 9 352 8.2E-38 T 12-10-2018 N288_19930 a12e117817d37f1aae413670b75b82f6 719 Gene3D G3DSA:3.90.640.10 242 298 8.2E-38 T 12-10-2018 N288_23020 757b036337a626026f8f041dca0cf8fa 274 Gene3D G3DSA:1.10.3720.10 1 265 3.5E-63 T 12-10-2018 IPR035906 MetI-like superfamily N288_23020 757b036337a626026f8f041dca0cf8fa 274 SUPERFAMILY SSF161098 6 274 1.31E-68 T 12-10-2018 IPR035906 MetI-like superfamily N288_23020 757b036337a626026f8f041dca0cf8fa 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 264 9.4E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_13015 740e03c727d46f06acde2f8930a650cb 138 Gene3D G3DSA:3.10.180.10 2 115 3.7E-10 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_07890 be774314dee54718154ade6db9fc03a0 172 Gene3D G3DSA:3.90.1140.10 1 172 2.2E-43 T 12-10-2018 N288_07890 be774314dee54718154ade6db9fc03a0 172 Pfam PF13563 2'-5' RNA ligase superfamily 13 154 8.3E-26 T 12-10-2018 N288_07890 be774314dee54718154ade6db9fc03a0 172 Hamap MF_01444 Putative phosphoesterase . 1 169 39.103 T 12-10-2018 IPR022932 Putative phosphoesterase YjcG N288_07890 be774314dee54718154ade6db9fc03a0 172 SUPERFAMILY SSF55144 1 169 2.44E-33 T 12-10-2018 IPR009097 Cyclic phosphodiesterase N288_03825 2fb3654bb1ba254785a02655039c57b8 325 Gene3D G3DSA:3.10.180.10 66 217 3.8E-111 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_03825 2fb3654bb1ba254785a02655039c57b8 325 Gene3D G3DSA:3.10.180.10 5 309 3.8E-111 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_03825 2fb3654bb1ba254785a02655039c57b8 325 SUPERFAMILY SSF54593 3 302 5.57E-47 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_03825 2fb3654bb1ba254785a02655039c57b8 325 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 264 1.1E-15 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_14800 4f553348aeb6734b4836a8180b7d7086 281 Pfam PF05067 Manganese containing catalase 1 269 3.2E-120 T 12-10-2018 IPR007760 Manganese catalase N288_14800 4f553348aeb6734b4836a8180b7d7086 281 SUPERFAMILY SSF47240 1 272 8.12E-102 T 12-10-2018 IPR009078 Ferritin-like superfamily N288_14800 4f553348aeb6734b4836a8180b7d7086 281 Gene3D G3DSA:1.20.1260.10 1 198 1.8E-73 T 12-10-2018 IPR012347 Ferritin-like N288_14800 4f553348aeb6734b4836a8180b7d7086 281 Gene3D G3DSA:3.30.1530.10 207 270 1.8E-9 T 12-10-2018 IPR027407 Manganese catalase, C-terminal N288_19010 e6ca8a006c06667778ad2fe5fc0f9297 288 Pfam PF02163 Peptidase family M50 33 105 1.1E-9 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 N288_19010 e6ca8a006c06667778ad2fe5fc0f9297 288 Pfam PF02163 Peptidase family M50 113 170 8.7E-8 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 N288_14575 8c6dc73663c43170daaed3f3a73ee885 370 Gene3D G3DSA:3.10.105.10 121 340 3.0E-30 T 12-10-2018 N288_14575 8c6dc73663c43170daaed3f3a73ee885 370 Gene3D G3DSA:3.40.190.10 45 346 3.0E-30 T 12-10-2018 N288_14575 8c6dc73663c43170daaed3f3a73ee885 370 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 45 247 7.8E-19 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain N288_14575 8c6dc73663c43170daaed3f3a73ee885 370 SUPERFAMILY SSF53850 7 346 1.05E-32 T 12-10-2018 N288_25690 aa46d3f6abdbaa5b210f589a8f4af969 463 Pfam PF07602 Protein of unknown function (DUF1565) 40 239 3.2E-9 T 12-10-2018 IPR011459 Domain of unknown function DUF1565 N288_25690 aa46d3f6abdbaa5b210f589a8f4af969 463 SUPERFAMILY SSF51126 47 457 5.64E-64 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor N288_25690 aa46d3f6abdbaa5b210f589a8f4af969 463 SMART SM00710 287 308 48.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_25690 aa46d3f6abdbaa5b210f589a8f4af969 463 SMART SM00710 252 286 530.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_25690 aa46d3f6abdbaa5b210f589a8f4af969 463 SMART SM00710 374 395 1100.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_25690 aa46d3f6abdbaa5b210f589a8f4af969 463 SMART SM00710 154 183 490.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_25690 aa46d3f6abdbaa5b210f589a8f4af969 463 SMART SM00710 315 337 10.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_25690 aa46d3f6abdbaa5b210f589a8f4af969 463 SMART SM00710 123 152 5400.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_25690 aa46d3f6abdbaa5b210f589a8f4af969 463 SMART SM00710 217 239 2300.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_06830 c4f22159caf7ebc699ca9eb49cf56acd 191 SMART SM00347 35 135 3.8E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_06830 c4f22159caf7ebc699ca9eb49cf56acd 191 ProSitePatterns PS01117 MarR-type HTH domain signature. 74 108 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site N288_06830 c4f22159caf7ebc699ca9eb49cf56acd 191 SUPERFAMILY SSF46785 6 129 2.95E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_06830 c4f22159caf7ebc699ca9eb49cf56acd 191 Pfam PF01047 MarR family 42 99 6.6E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_06830 c4f22159caf7ebc699ca9eb49cf56acd 191 Hamap MF_01911 HTH-type transcriptional regulator Hpr [hpr]. 1 183 48.566 T 12-10-2018 IPR023488 HTH-type transcriptional regulator Hpr N288_06830 c4f22159caf7ebc699ca9eb49cf56acd 191 Gene3D G3DSA:1.10.10.10 1 165 4.0E-46 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_12855 a642763872cc3b8c645ef7d308251973 255 Gene3D G3DSA:3.40.50.1820 1 252 3.3E-46 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_12855 a642763872cc3b8c645ef7d308251973 255 Pfam PF12146 Serine aminopeptidase, S33 19 133 1.6E-12 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 N288_12855 a642763872cc3b8c645ef7d308251973 255 SUPERFAMILY SSF53474 3 244 6.62E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_13100 e0e6f098de29e7e348e5a249f5fb951e 362 PIRSF PIRSF038991 1 358 1.9E-89 T 12-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 N288_13100 e0e6f098de29e7e348e5a249f5fb951e 362 Pfam PF05145 Transition state regulatory protein AbrB 33 349 7.6E-83 T 12-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 N288_13100 e0e6f098de29e7e348e5a249f5fb951e 362 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 196 348 6.5E-36 T 12-10-2018 IPR017516 AbrB duplication N288_13100 e0e6f098de29e7e348e5a249f5fb951e 362 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 11 164 1.0E-39 T 12-10-2018 IPR017516 AbrB duplication N288_11455 d739d064dd36d70120a9d3ebbc449ae6 297 Gene3D G3DSA:3.90.550.10 1 284 5.9E-50 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_11455 d739d064dd36d70120a9d3ebbc449ae6 297 Pfam PF00535 Glycosyl transferase family 2 8 176 1.2E-26 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 N288_11455 d739d064dd36d70120a9d3ebbc449ae6 297 SUPERFAMILY SSF53448 6 250 2.06E-46 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_16240 6ac397c9c073e30a159b1613f543bc6a 56 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 30 51 2.7E-12 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like N288_16240 6ac397c9c073e30a159b1613f543bc6a 56 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 30 53 6.3E-12 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like N288_08950 a2d7207776f69629fd6f5db1b3780544 312 Gene3D G3DSA:1.10.357.140 40 194 4.0E-18 T 12-10-2018 N288_08950 a2d7207776f69629fd6f5db1b3780544 312 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 88 110 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site N288_08950 a2d7207776f69629fd6f5db1b3780544 312 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 30 309 3.0E-94 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 N288_08950 a2d7207776f69629fd6f5db1b3780544 312 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 28 311 18.436 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 N288_08950 a2d7207776f69629fd6f5db1b3780544 312 Pfam PF01040 UbiA prenyltransferase family 46 295 2.1E-59 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 N288_08930 a1477c09c038d0434f2a50307fd5e445 93 Pfam PF07408 Protein of unknown function (DUF1507) 9 90 9.5E-41 T 12-10-2018 IPR009983 Uncharacterised protein family UPF0358 N288_08930 a1477c09c038d0434f2a50307fd5e445 93 Hamap MF_01560 UPF0358 protein . 3 93 27.043 T 12-10-2018 IPR009983 Uncharacterised protein family UPF0358 N288_08930 a1477c09c038d0434f2a50307fd5e445 93 SUPERFAMILY SSF140404 7 84 6.15E-36 T 12-10-2018 IPR036270 UPF0358 superfamily N288_08930 a1477c09c038d0434f2a50307fd5e445 93 Gene3D G3DSA:1.10.287.750 5 92 6.5E-36 T 12-10-2018 IPR036270 UPF0358 superfamily N288_03690 6f1d1f47a8e00baca32b08c1fcc73089 86 Gene3D G3DSA:3.40.50.980 1 86 1.4E-29 T 12-10-2018 N288_03690 6f1d1f47a8e00baca32b08c1fcc73089 86 SUPERFAMILY SSF56801 3 85 2.49E-25 T 12-10-2018 N288_03690 6f1d1f47a8e00baca32b08c1fcc73089 86 Pfam PF00501 AMP-binding enzyme 8 86 1.6E-23 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 N288_20890 56af8315c41ef8169947240728885e1c 236 SUPERFAMILY SSF50685 142 183 3.0E-6 T 12-10-2018 IPR036908 RlpA-like domain superfamily N288_20890 56af8315c41ef8169947240728885e1c 236 Pfam PF06725 3D domain 142 203 1.0E-17 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 N288_01175 1bfc798fd03a9122ab05d80c170a1810 280 Pfam PF01740 STAS domain 166 266 4.2E-14 T 12-10-2018 IPR002645 STAS domain N288_01175 1bfc798fd03a9122ab05d80c170a1810 280 SUPERFAMILY SSF52091 163 269 5.49E-17 T 12-10-2018 IPR036513 STAS domain superfamily N288_01175 1bfc798fd03a9122ab05d80c170a1810 280 Gene3D G3DSA:3.30.750.24 159 277 4.2E-37 T 12-10-2018 IPR036513 STAS domain superfamily N288_10075 d8f44853f60c1e714c1fc78f847102c5 511 SUPERFAMILY SSF52540 257 490 6.77E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_10075 d8f44853f60c1e714c1fc78f847102c5 511 Gene3D G3DSA:3.40.50.300 1 228 2.9E-56 T 12-10-2018 N288_10075 d8f44853f60c1e714c1fc78f847102c5 511 SMART SM00382 29 217 8.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_10075 d8f44853f60c1e714c1fc78f847102c5 511 Pfam PF00005 ABC transporter 21 169 1.0E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_10075 d8f44853f60c1e714c1fc78f847102c5 511 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_10075 d8f44853f60c1e714c1fc78f847102c5 511 SUPERFAMILY SSF52540 3 226 2.42E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_10075 d8f44853f60c1e714c1fc78f847102c5 511 Gene3D G3DSA:3.40.50.300 255 510 4.2E-42 T 12-10-2018 N288_10075 d8f44853f60c1e714c1fc78f847102c5 511 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_10075 d8f44853f60c1e714c1fc78f847102c5 511 Pfam PF00005 ABC transporter 273 429 1.1E-17 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_09735 c3b4cb36348fb95992982c72120d2ba3 128 TIGRFAM TIGR02530 flg_new: flagellar operon protein 31 127 2.2E-31 T 12-10-2018 IPR013367 Flagellar, putative N288_09735 c3b4cb36348fb95992982c72120d2ba3 128 Pfam PF12611 Putative flagellar 103 126 2.3E-11 T 12-10-2018 IPR013367 Flagellar, putative N288_03630 97a1fdbe63361f7b77518d04d5fb613a 461 PRINTS PR00175 Sodium/alanine symporter signature 211 230 7.1E-50 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_03630 97a1fdbe63361f7b77518d04d5fb613a 461 PRINTS PR00175 Sodium/alanine symporter signature 353 375 7.1E-50 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_03630 97a1fdbe63361f7b77518d04d5fb613a 461 PRINTS PR00175 Sodium/alanine symporter signature 183 201 7.1E-50 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_03630 97a1fdbe63361f7b77518d04d5fb613a 461 PRINTS PR00175 Sodium/alanine symporter signature 412 432 7.1E-50 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_03630 97a1fdbe63361f7b77518d04d5fb613a 461 PRINTS PR00175 Sodium/alanine symporter signature 93 115 7.1E-50 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_03630 97a1fdbe63361f7b77518d04d5fb613a 461 PRINTS PR00175 Sodium/alanine symporter signature 306 324 7.1E-50 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_03630 97a1fdbe63361f7b77518d04d5fb613a 461 Pfam PF01235 Sodium:alanine symporter family 56 448 1.5E-133 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_03630 97a1fdbe63361f7b77518d04d5fb613a 461 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 442 3.1E-141 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_03630 97a1fdbe63361f7b77518d04d5fb613a 461 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 93 108 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 N288_25445 d3c6606fe07163de2756b49f45ce31ad 121 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 5 114 1.1E-37 T 12-10-2018 IPR018745 Domain of unknown function DUF2294 N288_09550 1f9aa0766eeeb55162807b1c775284ce 288 Pfam PF01882 Protein of unknown function DUF58 39 118 3.1E-17 T 12-10-2018 IPR002881 Domain of unknown function DUF58 N288_21035 bf19c8bc3b715850fcf97a6c3e4a01e1 88 Pfam PF11256 Protein of unknown function (DUF3055) 7 86 9.5E-38 T 12-10-2018 IPR021415 Protein of unknown function DUF3055 N288_14560 d495ad7a2ab4b244e4b09185e72e9cf6 312 SMART SM01060 7 312 2.2E-8 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_14560 d495ad7a2ab4b244e4b09185e72e9cf6 312 SUPERFAMILY SSF56634 11 306 1.83E-71 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_14560 d495ad7a2ab4b244e4b09185e72e9cf6 312 PIRSF PIRSF000296 3 308 2.2E-88 T 12-10-2018 IPR024168 Catalase, SrpA-type, predicted N288_14560 d495ad7a2ab4b244e4b09185e72e9cf6 312 Gene3D G3DSA:1.20.1280.120 13 301 2.1E-98 T 12-10-2018 N288_14560 d495ad7a2ab4b244e4b09185e72e9cf6 312 PRINTS PR00067 Catalase signature 58 76 1.8E-9 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_14560 d495ad7a2ab4b244e4b09185e72e9cf6 312 PRINTS PR00067 Catalase signature 21 43 1.8E-9 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_14560 d495ad7a2ab4b244e4b09185e72e9cf6 312 PRINTS PR00067 Catalase signature 280 306 1.8E-9 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_14560 d495ad7a2ab4b244e4b09185e72e9cf6 312 PRINTS PR00067 Catalase signature 99 117 1.8E-9 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_14560 d495ad7a2ab4b244e4b09185e72e9cf6 312 Gene3D G3DSA:2.40.180.20 34 287 2.1E-98 T 12-10-2018 N288_14560 d495ad7a2ab4b244e4b09185e72e9cf6 312 Pfam PF00199 Catalase 29 304 2.0E-29 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 N288_23310 637ecd6fa152371ffadfd1880ab66f3c 375 Gene3D G3DSA:3.40.50.2000 173 357 1.6E-78 T 12-10-2018 N288_23310 637ecd6fa152371ffadfd1880ab66f3c 375 Pfam PF00534 Glycosyl transferases group 1 190 350 8.5E-39 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 N288_23310 637ecd6fa152371ffadfd1880ab66f3c 375 Gene3D G3DSA:3.40.50.2000 23 370 1.6E-78 T 12-10-2018 N288_23310 637ecd6fa152371ffadfd1880ab66f3c 375 SUPERFAMILY SSF53756 2 370 1.22E-74 T 12-10-2018 N288_23310 637ecd6fa152371ffadfd1880ab66f3c 375 Pfam PF13477 Glycosyl transferase 4-like 2 147 3.7E-20 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 N288_23670 8069380f1fe3398ea24168fbdc326a1f 366 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 290 365 2.0E-25 T 12-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23670 8069380f1fe3398ea24168fbdc326a1f 366 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 291 2.8E-67 T 12-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23670 8069380f1fe3398ea24168fbdc326a1f 366 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 366 46.705 T 12-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23670 8069380f1fe3398ea24168fbdc326a1f 366 SUPERFAMILY SSF56762 16 365 2.49E-119 T 12-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23670 8069380f1fe3398ea24168fbdc326a1f 366 Gene3D G3DSA:1.10.645.20 4 366 7.8E-153 T 12-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_17075 151beea65ec9534ac98eae030f78063a 237 ProDom PD119161 YPHF BH1644 PROTEINS PRECURSOR ORF1 RBL05088 SIGNAL SIMILAR 17 234 3.0E-74 T 12-10-2018 N288_11275 5e3276e607eaeac381538864cc17ce10 166 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 19 162 4.4E-53 T 12-10-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit N288_11275 5e3276e607eaeac381538864cc17ce10 166 Gene3D G3DSA:3.30.300.130 3 103 1.6E-24 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily N288_11275 5e3276e607eaeac381538864cc17ce10 166 Pfam PF01883 Iron-sulfur cluster assembly protein 10 81 8.6E-15 T 12-10-2018 IPR002744 MIP18 family-like N288_11275 5e3276e607eaeac381538864cc17ce10 166 SUPERFAMILY SSF117916 9 102 1.96E-21 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily N288_25795 1110995a15ddbcc2c829bb3b5bf55fb6 242 Gene3D G3DSA:2.40.50.40 135 203 1.9E-18 T 12-10-2018 N288_25795 1110995a15ddbcc2c829bb3b5bf55fb6 242 SUPERFAMILY SSF52172 1 132 2.7E-23 T 12-10-2018 IPR011006 CheY-like superfamily N288_25795 1110995a15ddbcc2c829bb3b5bf55fb6 242 SMART SM00448 1 112 7.7E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_25795 1110995a15ddbcc2c829bb3b5bf55fb6 242 Pfam PF00072 Response regulator receiver domain 4 112 3.8E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_25795 1110995a15ddbcc2c829bb3b5bf55fb6 242 Gene3D G3DSA:3.40.50.2300 1 134 1.3E-28 T 12-10-2018 N288_25795 1110995a15ddbcc2c829bb3b5bf55fb6 242 Pfam PF04397 LytTr DNA-binding domain 144 240 1.4E-28 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 N288_25795 1110995a15ddbcc2c829bb3b5bf55fb6 242 SMART SM00850 143 241 2.2E-32 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 N288_22150 e0c60a5604d096898f962c6576f0f859 353 ProSitePatterns PS01348 MraY family signature 2. 145 156 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_22150 e0c60a5604d096898f962c6576f0f859 353 Pfam PF00953 Glycosyl transferase family 4 71 225 2.4E-39 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 N288_19555 abc1e644c22d55065a2b0ad0e6f087ea 211 Pfam PF02659 Putative manganese efflux pump 4 83 8.7E-13 T 12-10-2018 IPR003810 Putative manganese efflux pump N288_19555 abc1e644c22d55065a2b0ad0e6f087ea 211 Pfam PF02659 Putative manganese efflux pump 127 208 5.0E-9 T 12-10-2018 IPR003810 Putative manganese efflux pump N288_19555 abc1e644c22d55065a2b0ad0e6f087ea 211 TIGRFAM TIGR02840 spore_YtaF: putative sporulation protein YtaF 5 211 1.7E-74 T 12-10-2018 IPR014205 Sporulation protein YtaF N288_21070 14862efb0ef6b09558687d22e7954c15 489 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 375 395 8.6E-17 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 N288_21070 14862efb0ef6b09558687d22e7954c15 489 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 71 97 8.6E-17 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 N288_21070 14862efb0ef6b09558687d22e7954c15 489 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 298 317 8.6E-17 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 N288_21070 14862efb0ef6b09558687d22e7954c15 489 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 416 436 8.6E-17 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 N288_21070 14862efb0ef6b09558687d22e7954c15 489 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 27 46 8.6E-17 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 N288_21070 14862efb0ef6b09558687d22e7954c15 489 Pfam PF00209 Sodium:neurotransmitter symporter family 1 105 9.2E-33 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 N288_21070 14862efb0ef6b09558687d22e7954c15 489 Pfam PF00209 Sodium:neurotransmitter symporter family 112 464 2.2E-74 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 N288_21070 14862efb0ef6b09558687d22e7954c15 489 SUPERFAMILY SSF161070 1 473 3.66E-139 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 N288_15415 80813fac7105f74511436a0f693a4890 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 130 314 5.7E-29 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_15415 80813fac7105f74511436a0f693a4890 314 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 30 82 6.0E-10 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain N288_15415 80813fac7105f74511436a0f693a4890 314 Gene3D G3DSA:1.10.3720.10 94 314 4.3E-24 T 12-10-2018 IPR035906 MetI-like superfamily N288_15415 80813fac7105f74511436a0f693a4890 314 SUPERFAMILY SSF161098 98 296 5.36E-27 T 12-10-2018 IPR035906 MetI-like superfamily N288_03755 572c7bc35b6aa948302fbcf81b7de14f 273 SMART SM00849 18 207 1.0E-10 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_03755 572c7bc35b6aa948302fbcf81b7de14f 273 Gene3D G3DSA:3.60.15.10 4 228 7.8E-32 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_03755 572c7bc35b6aa948302fbcf81b7de14f 273 Pfam PF00753 Metallo-beta-lactamase superfamily 18 192 1.5E-14 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_03755 572c7bc35b6aa948302fbcf81b7de14f 273 SUPERFAMILY SSF56281 19 242 1.05E-36 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_16440 4f76f82be7297eb02423eb5ce16be9cb 144 Pfam PF06491 Disulphide isomerase 8 144 4.2E-63 T 12-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family N288_16440 4f76f82be7297eb02423eb5ce16be9cb 144 Gene3D G3DSA:3.40.30.10 25 144 1.2E-53 T 12-10-2018 N288_16440 4f76f82be7297eb02423eb5ce16be9cb 144 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 8 144 2.5E-66 T 12-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family N288_00795 881ec4916ae5b88f9a9ff0129f373944 122 SUPERFAMILY SSF50193 1 122 3.66E-50 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 N288_00795 881ec4916ae5b88f9a9ff0129f373944 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.3E-53 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 N288_00795 881ec4916ae5b88f9a9ff0129f373944 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 12-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_00795 881ec4916ae5b88f9a9ff0129f373944 122 Gene3D G3DSA:2.40.150.20 1 122 3.3E-53 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 N288_00795 881ec4916ae5b88f9a9ff0129f373944 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.2E-58 T 12-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 N288_00795 881ec4916ae5b88f9a9ff0129f373944 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.943 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 N288_00795 881ec4916ae5b88f9a9ff0129f373944 122 SMART SM01374 1 122 4.0E-85 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 N288_09215 08fe101bd540e901b267a82d0195f0f5 265 Hamap MF_00912 Cell division protein DivIB [divIB]. 9 253 28.951 T 12-10-2018 IPR026580 Cell division protein DivIB N288_09215 08fe101bd540e901b267a82d0195f0f5 265 Gene3D G3DSA:3.40.50.10960 117 232 3.6E-42 T 12-10-2018 N288_09215 08fe101bd540e901b267a82d0195f0f5 265 Pfam PF03799 Cell division protein FtsQ 122 238 2.3E-9 T 12-10-2018 IPR005548 Cell division protein FtsQ/DivIB N288_09215 08fe101bd540e901b267a82d0195f0f5 265 Gene3D G3DSA:3.10.20.310 50 116 6.1E-6 T 12-10-2018 N288_09215 08fe101bd540e901b267a82d0195f0f5 265 Pfam PF08478 POTRA domain, FtsQ-type 50 118 4.5E-19 T 12-10-2018 IPR013685 POTRA domain, FtsQ-type N288_06720 46e808a430e3253da6458ed216f43c8a 263 Gene3D G3DSA:1.10.12.10 206 263 3.1E-18 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal N288_06720 46e808a430e3253da6458ed216f43c8a 263 SUPERFAMILY SSF52096 5 262 2.28E-67 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_06720 46e808a430e3253da6458ed216f43c8a 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 262 1.6E-56 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 N288_06720 46e808a430e3253da6458ed216f43c8a 263 Gene3D G3DSA:3.90.226.10 2 199 7.1E-53 T 12-10-2018 N288_12430 4f299301c57cb50bd646df0187dd5ecc 276 SUPERFAMILY SSF110710 8 266 5.23E-94 T 12-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like N288_12430 4f299301c57cb50bd646df0187dd5ecc 276 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 35 264 3.2E-81 T 12-10-2018 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 N288_14050 50efe8b24267c17e598aa5bd5833127f 135 SUPERFAMILY SSF46785 45 119 1.45E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_14050 50efe8b24267c17e598aa5bd5833127f 135 Gene3D G3DSA:1.10.10.10 22 134 1.3E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_14050 50efe8b24267c17e598aa5bd5833127f 135 Pfam PF03551 Transcriptional regulator PadR-like family 50 116 1.5E-13 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal N288_20440 8d2a1323ce48c156efc287187024f5d7 478 Hamap MF_00484 Glycogen synthase [glgA]. 1 474 46.623 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 N288_20440 8d2a1323ce48c156efc287187024f5d7 478 Gene3D G3DSA:3.40.50.2000 3 472 1.0E-183 T 12-10-2018 N288_20440 8d2a1323ce48c156efc287187024f5d7 478 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 473 1.2E-176 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 N288_20440 8d2a1323ce48c156efc287187024f5d7 478 Pfam PF00534 Glycosyl transferases group 1 289 438 4.2E-15 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 N288_20440 8d2a1323ce48c156efc287187024f5d7 478 Pfam PF08323 Starch synthase catalytic domain 2 236 4.8E-86 T 12-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 N288_20440 8d2a1323ce48c156efc287187024f5d7 478 SUPERFAMILY SSF53756 2 476 3.28E-126 T 12-10-2018 N288_20440 8d2a1323ce48c156efc287187024f5d7 478 Gene3D G3DSA:3.40.50.2000 250 458 1.0E-183 T 12-10-2018 N288_09210 2a4c49534454c7e72e6f2ff3d56f4603 302 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 302 89.949 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_09210 2a4c49534454c7e72e6f2ff3d56f4603 302 SUPERFAMILY SSF56194 197 300 2.35E-36 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_09210 2a4c49534454c7e72e6f2ff3d56f4603 302 Pfam PF01565 FAD binding domain 35 164 7.6E-22 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 N288_09210 2a4c49534454c7e72e6f2ff3d56f4603 302 Gene3D G3DSA:3.90.78.10 217 302 4.1E-34 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_09210 2a4c49534454c7e72e6f2ff3d56f4603 302 Gene3D G3DSA:3.30.43.10 1 88 4.1E-31 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 N288_09210 2a4c49534454c7e72e6f2ff3d56f4603 302 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 22 300 4.9E-98 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_09210 2a4c49534454c7e72e6f2ff3d56f4603 302 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 201 299 6.6E-29 T 12-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 N288_09210 2a4c49534454c7e72e6f2ff3d56f4603 302 SUPERFAMILY SSF56176 8 194 1.07E-40 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 N288_09210 2a4c49534454c7e72e6f2ff3d56f4603 302 Gene3D G3DSA:3.30.465.10 89 216 1.2E-46 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 N288_00460 ab01eebc5d2cc44795c69c5cdd805113 471 Pfam PF04715 Anthranilate synthase component I, N terminal region 21 150 6.8E-30 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 N288_00460 ab01eebc5d2cc44795c69c5cdd805113 471 Pfam PF00425 chorismate binding enzyme 199 452 1.7E-99 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal N288_00460 ab01eebc5d2cc44795c69c5cdd805113 471 SUPERFAMILY SSF56322 8 459 4.45E-148 T 12-10-2018 IPR005801 ADC synthase GO:0009058 N288_00460 ab01eebc5d2cc44795c69c5cdd805113 471 Gene3D G3DSA:3.60.120.10 2 468 7.6E-162 T 12-10-2018 IPR005801 ADC synthase GO:0009058 N288_00460 ab01eebc5d2cc44795c69c5cdd805113 471 PRINTS PR00095 Anthranilate synthase component I signature 394 408 1.9E-20 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 N288_00460 ab01eebc5d2cc44795c69c5cdd805113 471 PRINTS PR00095 Anthranilate synthase component I signature 409 423 1.9E-20 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 N288_00460 ab01eebc5d2cc44795c69c5cdd805113 471 PRINTS PR00095 Anthranilate synthase component I signature 314 327 1.9E-20 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 N288_00460 ab01eebc5d2cc44795c69c5cdd805113 471 PRINTS PR00095 Anthranilate synthase component I signature 300 313 1.9E-20 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 N288_24005 e72a1033d0790b96bd19db229fef3b8c 170 Pfam PF08741 YwhD family 6 167 1.1E-84 T 12-10-2018 IPR014852 Uncharacterised protein YwhD N288_19665 f33c6effafe254b51edda5a128b92eaa 1119 SUPERFAMILY SSF89550 3 257 2.16E-13 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 N288_19665 f33c6effafe254b51edda5a128b92eaa 1119 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 286 705 4.0E-175 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_19665 f33c6effafe254b51edda5a128b92eaa 1119 Pfam PF14579 Helix-hairpin-helix motif 780 866 5.7E-20 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_19665 f33c6effafe254b51edda5a128b92eaa 1119 Gene3D G3DSA:1.10.10.1600 417 494 1.1E-20 T 12-10-2018 N288_19665 f33c6effafe254b51edda5a128b92eaa 1119 Gene3D G3DSA:3.20.20.140 1 264 4.2E-84 T 12-10-2018 N288_19665 f33c6effafe254b51edda5a128b92eaa 1119 Pfam PF01336 OB-fold nucleic acid binding domain 966 1030 8.0E-7 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 N288_19665 f33c6effafe254b51edda5a128b92eaa 1119 Pfam PF02811 PHP domain 5 167 3.0E-36 T 12-10-2018 IPR004013 PHP domain GO:0003824 N288_19665 f33c6effafe254b51edda5a128b92eaa 1119 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 3 994 0.0 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 N288_19665 f33c6effafe254b51edda5a128b92eaa 1119 SMART SM00481 4 71 6.8E-19 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal N288_17520 2c59a475787767d8075d3f94dea63f16 123 Gene3D G3DSA:3.10.180.10 9 121 1.4E-29 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_17520 2c59a475787767d8075d3f94dea63f16 123 SUPERFAMILY SSF54593 4 121 1.48E-20 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_17520 2c59a475787767d8075d3f94dea63f16 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 118 1.2E-7 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_13055 77e24cdf92e15ecfd6bd5caffde05ef1 227 Pfam PF13398 Peptidase M50B-like 14 215 9.7E-36 T 12-10-2018 N288_21510 6af812ccd02f68a48cf954ed12b187e1 381 Pfam PF00005 ABC transporter 18 164 7.2E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_21510 6af812ccd02f68a48cf954ed12b187e1 381 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 16 366 4.1E-127 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 N288_21510 6af812ccd02f68a48cf954ed12b187e1 381 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_21510 6af812ccd02f68a48cf954ed12b187e1 381 Pfam PF00571 CBS domain 314 365 3.6E-6 T 12-10-2018 IPR000644 CBS domain N288_21510 6af812ccd02f68a48cf954ed12b187e1 381 Pfam PF00571 CBS domain 253 302 2.2E-8 T 12-10-2018 IPR000644 CBS domain N288_21510 6af812ccd02f68a48cf954ed12b187e1 381 Gene3D G3DSA:3.40.50.300 1 249 1.3E-77 T 12-10-2018 N288_21510 6af812ccd02f68a48cf954ed12b187e1 381 SUPERFAMILY SSF52540 1 241 3.5E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_21510 6af812ccd02f68a48cf954ed12b187e1 381 SUPERFAMILY SSF54631 252 366 4.57E-22 T 12-10-2018 N288_21510 6af812ccd02f68a48cf954ed12b187e1 381 SMART SM00382 27 214 2.5E-22 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_21510 6af812ccd02f68a48cf954ed12b187e1 381 Gene3D G3DSA:3.10.580.10 250 366 7.3E-21 T 12-10-2018 N288_21510 6af812ccd02f68a48cf954ed12b187e1 381 SMART SM00116 320 366 37.0 T 12-10-2018 IPR000644 CBS domain N288_21510 6af812ccd02f68a48cf954ed12b187e1 381 SMART SM00116 259 307 1.2E-5 T 12-10-2018 IPR000644 CBS domain N288_19340 56099b8fafb5beb402b9e330717e5167 74 ProSitePatterns PS00622 LuxR-type HTH domain signature. 26 53 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_19340 56099b8fafb5beb402b9e330717e5167 74 Gene3D G3DSA:1.10.10.10 1 74 3.7E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_19340 56099b8fafb5beb402b9e330717e5167 74 SUPERFAMILY SSF46894 8 72 5.44E-23 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 N288_19340 56099b8fafb5beb402b9e330717e5167 74 SMART SM00421 9 66 4.9E-25 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_19340 56099b8fafb5beb402b9e330717e5167 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 26 42 2.6E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_19340 56099b8fafb5beb402b9e330717e5167 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 42 54 2.6E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_19340 56099b8fafb5beb402b9e330717e5167 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 12 26 2.6E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_19340 56099b8fafb5beb402b9e330717e5167 74 Pfam PF00196 Bacterial regulatory proteins, luxR family 12 64 6.3E-24 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 N288_01235 dadb24d25c692a1e1ccb9087d01f3d31 193 Pfam PF09335 SNARE associated Golgi protein 33 148 3.0E-19 T 12-10-2018 IPR032816 SNARE associated Golgi protein N288_17695 fc2afd708de6c7560dcf6bd77dbfc4fd 267 SUPERFAMILY SSF53850 1 265 9.75E-69 T 12-10-2018 N288_17695 fc2afd708de6c7560dcf6bd77dbfc4fd 267 SMART SM00062 44 266 3.2E-71 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF N288_17695 fc2afd708de6c7560dcf6bd77dbfc4fd 267 SMART SM00079 44 265 5.2E-5 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 N288_17695 fc2afd708de6c7560dcf6bd77dbfc4fd 267 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 69 82 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site N288_17695 fc2afd708de6c7560dcf6bd77dbfc4fd 267 Gene3D G3DSA:3.40.190.10 46 264 3.6E-67 T 12-10-2018 N288_17695 fc2afd708de6c7560dcf6bd77dbfc4fd 267 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 264 3.1E-62 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF N288_17695 fc2afd708de6c7560dcf6bd77dbfc4fd 267 Gene3D G3DSA:3.40.190.10 132 223 3.6E-67 T 12-10-2018 N288_10625 66f0452c84ca2f11ba26a877e5baea13 191 SUPERFAMILY SSF53335 19 175 1.84E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_10625 66f0452c84ca2f11ba26a877e5baea13 191 Pfam PF08241 Methyltransferase domain 44 141 3.9E-18 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 N288_10625 66f0452c84ca2f11ba26a877e5baea13 191 Gene3D G3DSA:3.40.50.150 4 189 6.8E-44 T 12-10-2018 N288_06125 93cd41e418c4652fe0e376a19c3b1ad3 566 SUPERFAMILY SSF69318 60 145 3.4E-6 T 12-10-2018 N288_06125 93cd41e418c4652fe0e376a19c3b1ad3 566 Pfam PF16800 IseA DL-endopeptidase inhibitor 418 563 5.5E-42 T 12-10-2018 IPR031841 DL-endopeptidase inhibitor IseA N288_06125 93cd41e418c4652fe0e376a19c3b1ad3 566 Gene3D G3DSA:3.10.450.420 415 564 2.9E-37 T 12-10-2018 N288_05425 6ecd9c1780267f81cc00b66c5076257e 138 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 15 137 2.2E-14 T 12-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like N288_05425 6ecd9c1780267f81cc00b66c5076257e 138 Gene3D G3DSA:3.30.530.20 1 138 1.1E-40 T 12-10-2018 IPR023393 START-like domain superfamily N288_05425 6ecd9c1780267f81cc00b66c5076257e 138 SUPERFAMILY SSF55961 3 137 3.93E-41 T 12-10-2018 N288_19190 d962d732625cd6dc7e1fd8cb92f29a9e 259 Pfam PF02602 Uroporphyrinogen-III synthase HemD 25 247 2.0E-60 T 12-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 N288_19190 d962d732625cd6dc7e1fd8cb92f29a9e 259 SUPERFAMILY SSF69618 10 256 1.01E-64 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 N288_19190 d962d732625cd6dc7e1fd8cb92f29a9e 259 Gene3D G3DSA:3.40.50.10090 128 257 8.5E-24 T 12-10-2018 N288_19190 d962d732625cd6dc7e1fd8cb92f29a9e 259 Gene3D G3DSA:3.40.50.10090 5 127 5.9E-23 T 12-10-2018 N288_02655 b82570c132d289ce564d48481beca882 239 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 56.687 T 12-10-2018 IPR026562 Probable transcriptional regulatory protein YeeN N288_02655 b82570c132d289ce564d48481beca882 239 Pfam PF01709 Transcriptional regulator 4 235 6.9E-80 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_02655 b82570c132d289ce564d48481beca882 239 Gene3D G3DSA:3.30.70.980 131 201 3.1E-46 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_02655 b82570c132d289ce564d48481beca882 239 Gene3D G3DSA:1.10.10.200 2 79 1.6E-23 T 12-10-2018 IPR017856 Integrase-like, N-terminal N288_02655 b82570c132d289ce564d48481beca882 239 SUPERFAMILY SSF75625 1 238 1.09E-79 T 12-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_02655 b82570c132d289ce564d48481beca882 239 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 31.124 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_02655 b82570c132d289ce564d48481beca882 239 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 235 3.4E-69 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_02655 b82570c132d289ce564d48481beca882 239 Gene3D G3DSA:3.30.70.980 83 234 3.1E-46 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_07795 b4e5febec79ba5fb45489d7d4d240827 235 Gene3D G3DSA:3.30.240.20 82 155 1.7E-22 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily N288_07795 b4e5febec79ba5fb45489d7d4d240827 235 Pfam PF04239 Protein of unknown function (DUF421) 91 157 6.3E-21 T 12-10-2018 IPR007353 Protein of unknown function DUF421 N288_04565 6a917bdc98869129f2b7c2b0481cd8e2 258 SUPERFAMILY SSF50814 76 258 6.59E-76 T 12-10-2018 IPR012674 Calycin N288_04565 6a917bdc98869129f2b7c2b0481cd8e2 258 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 78 258 1.6E-82 T 12-10-2018 IPR015304 ZinT domain GO:0008270 N288_04565 6a917bdc98869129f2b7c2b0481cd8e2 258 Gene3D G3DSA:2.40.128.20 72 258 2.4E-80 T 12-10-2018 IPR012674 Calycin N288_15585 20d0db83d4bfff84b16137e2e93970e6 331 Pfam PF13379 NMT1-like family 31 266 1.0E-29 T 12-10-2018 N288_15585 20d0db83d4bfff84b16137e2e93970e6 331 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 35 330 1.5E-66 T 12-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 N288_15585 20d0db83d4bfff84b16137e2e93970e6 331 SUPERFAMILY SSF53850 32 263 8.71E-45 T 12-10-2018 N288_15585 20d0db83d4bfff84b16137e2e93970e6 331 SMART SM00062 34 259 5.5E-4 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF N288_15585 20d0db83d4bfff84b16137e2e93970e6 331 Gene3D G3DSA:3.40.190.10 151 331 2.9E-28 T 12-10-2018 N288_15585 20d0db83d4bfff84b16137e2e93970e6 331 Gene3D G3DSA:3.40.190.10 31 150 1.9E-22 T 12-10-2018 N288_09760 8266cf4ab144160e60ba28c696a0debe 408 Pfam PF04509 CheC-like family 37 73 2.3E-15 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 N288_09760 8266cf4ab144160e60ba28c696a0debe 408 Pfam PF04509 CheC-like family 134 169 1.9E-14 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 N288_09760 8266cf4ab144160e60ba28c696a0debe 408 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 328 398 4.6E-25 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) N288_09760 8266cf4ab144160e60ba28c696a0debe 408 PRINTS PR00956 Flagellar motor switch protein FliN signature 328 344 1.1E-29 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 N288_09760 8266cf4ab144160e60ba28c696a0debe 408 PRINTS PR00956 Flagellar motor switch protein FliN signature 345 361 1.1E-29 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 N288_09760 8266cf4ab144160e60ba28c696a0debe 408 PRINTS PR00956 Flagellar motor switch protein FliN signature 374 389 1.1E-29 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 N288_09760 8266cf4ab144160e60ba28c696a0debe 408 PRINTS PR00956 Flagellar motor switch protein FliN signature 361 374 1.1E-29 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 N288_09760 8266cf4ab144160e60ba28c696a0debe 408 SUPERFAMILY SSF101801 325 406 2.62E-25 T 12-10-2018 IPR036429 SpoA-like superfamily N288_09760 8266cf4ab144160e60ba28c696a0debe 408 Gene3D G3DSA:3.40.1550.10 32 228 3.8E-55 T 12-10-2018 IPR028976 CheC-like superfamily N288_09760 8266cf4ab144160e60ba28c696a0debe 408 Gene3D G3DSA:2.30.330.10 315 408 8.0E-36 T 12-10-2018 IPR036429 SpoA-like superfamily N288_09760 8266cf4ab144160e60ba28c696a0debe 408 SUPERFAMILY SSF103039 32 222 2.62E-50 T 12-10-2018 IPR028976 CheC-like superfamily N288_09760 8266cf4ab144160e60ba28c696a0debe 408 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 325 400 7.6E-32 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 N288_25310 2181f3d564a530a7f4f1c1a78b43c13b 141 SUPERFAMILY SSF46785 8 137 7.23E-33 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_25310 2181f3d564a530a7f4f1c1a78b43c13b 141 SMART SM00347 24 124 2.7E-27 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_25310 2181f3d564a530a7f4f1c1a78b43c13b 141 Pfam PF01047 MarR family 31 88 1.3E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_25310 2181f3d564a530a7f4f1c1a78b43c13b 141 Gene3D G3DSA:1.10.10.10 3 135 3.3E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_25310 2181f3d564a530a7f4f1c1a78b43c13b 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 1.6E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_25310 2181f3d564a530a7f4f1c1a78b43c13b 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 1.6E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_25310 2181f3d564a530a7f4f1c1a78b43c13b 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 1.6E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_16680 298e74fb651a9fdb217569015c46a3f7 435 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 332 352 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 N288_16680 298e74fb651a9fdb217569015c46a3f7 435 TIGRFAM TIGR03173 pbuX: xanthine permease 11 417 5.0E-169 T 12-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 N288_16680 298e74fb651a9fdb217569015c46a3f7 435 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 6 415 3.4E-140 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 N288_16680 298e74fb651a9fdb217569015c46a3f7 435 Pfam PF00860 Permease family 7 384 2.0E-121 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 N288_18435 2a2a4a9d80a6e68589e725baa358cd4d 332 Pfam PF12127 SigmaW regulon antibacterial 10 320 9.1E-166 T 12-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity N288_18435 2a2a4a9d80a6e68589e725baa358cd4d 332 Hamap MF_01562 UPF0365 protein . 4 324 49.539 T 12-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity N288_25925 b3885e1cc1b786e5d8918eda98b63291 81 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 9 80 22.826 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_25925 b3885e1cc1b786e5d8918eda98b63291 81 ProSitePatterns PS00057 Ribosomal protein S18 signature. 28 51 - T 12-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_25925 b3885e1cc1b786e5d8918eda98b63291 81 SUPERFAMILY SSF46911 9 79 1.28E-31 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_25925 b3885e1cc1b786e5d8918eda98b63291 81 Pfam PF01084 Ribosomal protein S18 25 75 4.1E-28 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_25925 b3885e1cc1b786e5d8918eda98b63291 81 PRINTS PR00974 Ribosomal protein S18 family signature 35 45 6.1E-22 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_25925 b3885e1cc1b786e5d8918eda98b63291 81 PRINTS PR00974 Ribosomal protein S18 family signature 53 67 6.1E-22 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_25925 b3885e1cc1b786e5d8918eda98b63291 81 PRINTS PR00974 Ribosomal protein S18 family signature 67 77 6.1E-22 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_25925 b3885e1cc1b786e5d8918eda98b63291 81 PRINTS PR00974 Ribosomal protein S18 family signature 45 52 6.1E-22 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_25925 b3885e1cc1b786e5d8918eda98b63291 81 Gene3D G3DSA:4.10.640.10 5 80 2.1E-31 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_25925 b3885e1cc1b786e5d8918eda98b63291 81 TIGRFAM TIGR00165 S18: ribosomal protein bS18 12 79 5.2E-38 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_25925 b3885e1cc1b786e5d8918eda98b63291 81 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 27 79 3.0E-22 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_09620 eef268a1c36dd4f91f9c3b82742d29b4 255 Gene3D G3DSA:3.30.420.10 51 255 7.5E-75 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 N288_09620 eef268a1c36dd4f91f9c3b82742d29b4 255 Hamap MF_00052_B Ribonuclease HII [rnhB]. 73 251 35.522 T 12-10-2018 IPR022898 Ribonuclease HII GO:0004523 N288_09620 eef268a1c36dd4f91f9c3b82742d29b4 255 SUPERFAMILY SSF53098 62 254 1.52E-66 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily N288_09620 eef268a1c36dd4f91f9c3b82742d29b4 255 Pfam PF01351 Ribonuclease HII 75 249 3.7E-33 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain N288_02180 ea6621ca452c1b3ec28e2b945bf4db53 429 Pfam PF13416 Bacterial extracellular solute-binding protein 56 362 1.9E-35 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein N288_02180 ea6621ca452c1b3ec28e2b945bf4db53 429 Gene3D G3DSA:3.40.190.10 149 393 1.8E-58 T 12-10-2018 N288_02180 ea6621ca452c1b3ec28e2b945bf4db53 429 Gene3D G3DSA:3.40.190.10 56 358 1.8E-58 T 12-10-2018 N288_02180 ea6621ca452c1b3ec28e2b945bf4db53 429 SUPERFAMILY SSF53850 16 428 3.26E-60 T 12-10-2018 N288_00240 93c49ad81c95cd1ef11be79bfa7551f6 95 Pfam PF01541 GIY-YIG catalytic domain 6 77 6.3E-18 T 12-10-2018 IPR000305 GIY-YIG endonuclease N288_00240 93c49ad81c95cd1ef11be79bfa7551f6 95 Gene3D G3DSA:3.40.1440.10 1 94 7.6E-34 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 N288_00240 93c49ad81c95cd1ef11be79bfa7551f6 95 SUPERFAMILY SSF82771 6 76 4.05E-14 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 N288_23680 5f63c55a5c2468449c9aa7c68c11ba45 170 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 46 155 4.2E-26 T 12-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23680 5f63c55a5c2468449c9aa7c68c11ba45 170 SUPERFAMILY SSF56770 18 163 1.27E-66 T 12-10-2018 N288_23680 5f63c55a5c2468449c9aa7c68c11ba45 170 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 20 161 1.7E-73 T 12-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23680 5f63c55a5c2468449c9aa7c68c11ba45 170 Gene3D G3DSA:3.40.50.12280 3 169 4.7E-78 T 12-10-2018 N288_23680 5f63c55a5c2468449c9aa7c68c11ba45 170 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 9 160 42.96 T 12-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_03395 08c24ee49d516269a144f54faf7e88ce 175 Pfam PF03061 Thioesterase superfamily 26 98 5.2E-16 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 N288_03395 08c24ee49d516269a144f54faf7e88ce 175 Gene3D G3DSA:3.10.129.10 1 164 1.2E-55 T 12-10-2018 N288_03395 08c24ee49d516269a144f54faf7e88ce 175 SUPERFAMILY SSF54637 6 155 3.1E-47 T 12-10-2018 IPR029069 HotDog domain superfamily N288_24660 764999e19d5cb8769ee95869014f3a48 153 Gene3D G3DSA:1.20.1260.50 1 151 2.9E-55 T 12-10-2018 N288_13975 b05ef8260fbe9893a2f45da65aae6d6b 151 Pfam PF13273 Protein of unknown function (DUF4064) 7 123 3.2E-20 T 12-10-2018 IPR025273 Domain of unknown function DUF4064 N288_09195 d6b40d7de323c21fd0972197968dcc56 366 TIGRFAM TIGR02615 spoVE: stage V sporulation protein E 9 362 1.7E-179 T 12-10-2018 IPR013438 Sporulation stage V, protein E N288_09195 d6b40d7de323c21fd0972197968dcc56 366 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 9 364 6.0E-102 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_09195 d6b40d7de323c21fd0972197968dcc56 366 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 322 346 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_09195 d6b40d7de323c21fd0972197968dcc56 366 Pfam PF01098 Cell cycle protein 12 365 7.7E-129 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_09195 d6b40d7de323c21fd0972197968dcc56 366 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 9 363 2.0E-133 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_18255 1435c15fdc7e5b19a6d079c02e2e5ad9 112 ProDom PD067165 YQFZ MEMBRANE WALL BH1402 TRANSMEMBRANE OB1935 CELL 1 107 6.0E-10 T 12-10-2018 IPR020506 Uncharacterised protein family YqfZ N288_16570 e9c4c1ec9cbd769b2294fbdd66ffadc1 58 Pfam PF10782 Zinc-finger 2 58 1.8E-25 T 12-10-2018 IPR019718 Protein of unknown function DUF2602 N288_25155 18b8b9f03f9d25c8df822d68cf94db62 114 Gene3D G3DSA:1.10.10.10 1 114 2.4E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_25155 18b8b9f03f9d25c8df822d68cf94db62 114 Pfam PF03551 Transcriptional regulator PadR-like family 16 87 6.6E-24 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal N288_25155 18b8b9f03f9d25c8df822d68cf94db62 114 SUPERFAMILY SSF46785 5 104 4.06E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_17600 3ce05cc9f76ae70da65df1678933758a 380 Pfam PF00535 Glycosyl transferase family 2 43 214 1.0E-20 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 N288_17600 3ce05cc9f76ae70da65df1678933758a 380 Gene3D G3DSA:3.90.550.10 25 255 7.5E-30 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_17600 3ce05cc9f76ae70da65df1678933758a 380 SUPERFAMILY SSF53448 37 245 2.03E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_23105 b47df31972a0e3a5c1b6f521911c5a3f 455 Gene3D G3DSA:1.10.8.80 131 261 1.3E-51 T 12-10-2018 N288_23105 b47df31972a0e3a5c1b6f521911c5a3f 455 SUPERFAMILY SSF52540 40 442 3.19E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_23105 b47df31972a0e3a5c1b6f521911c5a3f 455 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 57 394 2.5E-46 T 12-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain N288_23105 b47df31972a0e3a5c1b6f521911c5a3f 455 Gene3D G3DSA:3.40.50.300 54 441 1.3E-51 T 12-10-2018 N288_15445 44371d89f4d592595ed46bdc7efab521 419 Gene3D G3DSA:1.20.1250.20 1 407 1.9E-51 T 12-10-2018 N288_15445 44371d89f4d592595ed46bdc7efab521 419 SUPERFAMILY SSF103473 5 412 4.97E-59 T 12-10-2018 IPR036259 MFS transporter superfamily N288_15445 44371d89f4d592595ed46bdc7efab521 419 Pfam PF07690 Major Facilitator Superfamily 25 366 3.4E-39 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_15270 6311f51af7ec36bda332353ac0689451 509 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 300 316 1.0E-73 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_15270 6311f51af7ec36bda332353ac0689451 509 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 156 176 1.0E-73 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_15270 6311f51af7ec36bda332353ac0689451 509 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 387 404 1.0E-73 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_15270 6311f51af7ec36bda332353ac0689451 509 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 455 473 1.0E-73 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_15270 6311f51af7ec36bda332353ac0689451 509 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 273 292 1.0E-73 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_15270 6311f51af7ec36bda332353ac0689451 509 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 410 431 1.0E-73 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_15270 6311f51af7ec36bda332353ac0689451 509 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 253 272 1.0E-73 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_15270 6311f51af7ec36bda332353ac0689451 509 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 236 252 1.0E-73 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_15270 6311f51af7ec36bda332353ac0689451 509 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 341 360 1.0E-73 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_15270 6311f51af7ec36bda332353ac0689451 509 PIRSF PIRSF006615 9 509 6.7E-191 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_15270 6311f51af7ec36bda332353ac0689451 509 SUPERFAMILY SSF55486 12 503 4.76E-112 T 12-10-2018 N288_15270 6311f51af7ec36bda332353ac0689451 509 Gene3D G3DSA:1.10.1370.30 8 509 1.1E-205 T 12-10-2018 N288_15270 6311f51af7ec36bda332353ac0689451 509 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 14 503 6.0E-158 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 N288_03195 df6344350ca28642ece27448b71cc6fc 109 Pfam PF03551 Transcriptional regulator PadR-like family 14 82 9.2E-21 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal N288_03195 df6344350ca28642ece27448b71cc6fc 109 Gene3D G3DSA:1.10.10.10 1 104 8.9E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_03195 df6344350ca28642ece27448b71cc6fc 109 SUPERFAMILY SSF46785 10 101 2.73E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_21310 487311af3494fef085f70c8ad238c321 211 SUPERFAMILY SSF52402 3 116 3.27E-7 T 12-10-2018 N288_21310 487311af3494fef085f70c8ad238c321 211 Gene3D G3DSA:3.40.50.620 1 119 2.7E-5 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_24875 fb2401a9184e7c2790eeba34564606e3 334 SUPERFAMILY SSF53613 1 325 1.11E-68 T 12-10-2018 IPR029056 Ribokinase-like N288_24875 fb2401a9184e7c2790eeba34564606e3 334 Gene3D G3DSA:3.40.1190.20 1 334 2.6E-115 T 12-10-2018 IPR029056 Ribokinase-like N288_24875 fb2401a9184e7c2790eeba34564606e3 334 Pfam PF00294 pfkB family carbohydrate kinase 1 312 4.3E-33 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB N288_12375 b9cad9126b7f9d34dcec34647090c40e 262 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 4 250 29.377 T 12-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 N288_12375 b9cad9126b7f9d34dcec34647090c40e 262 PRINTS PR00701 60kDa inner membrane protein signature 130 153 1.3E-6 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 N288_12375 b9cad9126b7f9d34dcec34647090c40e 262 PRINTS PR00701 60kDa inner membrane protein signature 213 236 1.3E-6 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 N288_12375 b9cad9126b7f9d34dcec34647090c40e 262 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 58 244 5.9E-54 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 N288_12375 b9cad9126b7f9d34dcec34647090c40e 262 Pfam PF02096 60Kd inner membrane protein 59 245 7.7E-49 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 N288_18850 5f47fc63cc9005f280acaae842b48f3f 106 Pfam PF06305 Lipopolysaccharide assembly protein A domain 24 83 2.3E-16 T 12-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 N288_07955 c3ea14edb9dc4d2f0ae671183840c080 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 5.0E-41 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_07955 c3ea14edb9dc4d2f0ae671183840c080 310 Gene3D G3DSA:1.10.3720.10 83 299 2.6E-22 T 12-10-2018 IPR035906 MetI-like superfamily N288_07955 c3ea14edb9dc4d2f0ae671183840c080 310 SUPERFAMILY SSF161098 88 291 2.62E-19 T 12-10-2018 IPR035906 MetI-like superfamily N288_25365 0bb70a988bcafb5d4410c05248029590 277 Gene3D G3DSA:3.30.70.120 187 262 2.6E-23 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal N288_25365 0bb70a988bcafb5d4410c05248029590 277 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 8 209 2.5E-61 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT N288_25365 0bb70a988bcafb5d4410c05248029590 277 PIRSF PIRSF006483 1 276 7.7E-84 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT N288_25365 0bb70a988bcafb5d4410c05248029590 277 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 215 269 4.7E-22 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 N288_12940 ce30f531307a4f33323d9780399c984f 240 Gene3D G3DSA:3.10.580.10 86 237 2.6E-10 T 12-10-2018 N288_12940 ce30f531307a4f33323d9780399c984f 240 SUPERFAMILY SSF54631 105 235 1.77E-9 T 12-10-2018 N288_19820 690c28415e6a1e81b5b7dd1ffdf8fc74 380 Gene3D G3DSA:3.40.640.10 13 255 3.5E-131 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_19820 690c28415e6a1e81b5b7dd1ffdf8fc74 380 SUPERFAMILY SSF53383 1 374 2.66E-101 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_19820 690c28415e6a1e81b5b7dd1ffdf8fc74 380 PIRSF PIRSF005572 1 379 2.6E-115 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 N288_19820 690c28415e6a1e81b5b7dd1ffdf8fc74 380 Gene3D G3DSA:3.90.1150.10 2 370 3.5E-131 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_19820 690c28415e6a1e81b5b7dd1ffdf8fc74 380 Pfam PF00266 Aminotransferase class-V 2 363 1.8E-76 T 12-10-2018 IPR000192 Aminotransferase class V domain N288_07445 62d26d202fd2fe23d22aa781918435f8 273 Gene3D G3DSA:3.30.1240.10 86 192 1.3E-62 T 12-10-2018 N288_07445 62d26d202fd2fe23d22aa781918435f8 273 SUPERFAMILY SSF56784 3 267 2.96E-68 T 12-10-2018 IPR036412 HAD-like superfamily N288_07445 62d26d202fd2fe23d22aa781918435f8 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 236 1.6E-25 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 N288_07445 62d26d202fd2fe23d22aa781918435f8 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 262 1.0E-63 T 12-10-2018 N288_07445 62d26d202fd2fe23d22aa781918435f8 273 Gene3D G3DSA:3.40.50.1000 7 262 1.3E-62 T 12-10-2018 IPR023214 HAD superfamily N288_07445 62d26d202fd2fe23d22aa781918435f8 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 263 8.5E-59 T 12-10-2018 IPR000150 Cof family GO:0016787 N288_02470 510b9f8d096dcb26909d00ee06ff5e9c 273 Pfam PF04055 Radical SAM superfamily 29 192 2.6E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 N288_02470 510b9f8d096dcb26909d00ee06ff5e9c 273 SUPERFAMILY SSF102114 28 201 9.29E-12 T 12-10-2018 N288_02470 510b9f8d096dcb26909d00ee06ff5e9c 273 SMART SM00729 24 244 0.0097 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 N288_02470 510b9f8d096dcb26909d00ee06ff5e9c 273 Gene3D G3DSA:3.80.30.30 68 196 1.2E-7 T 12-10-2018 N288_09085 c5d1d2560e7b94124f523760bbbe17a9 173 Pfam PF02620 Uncharacterized ACR, COG1399 56 164 7.2E-23 T 12-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD N288_14605 2eeb77a87ac953d4ce477e162a8f7536 104 Gene3D G3DSA:1.10.10.10 6 104 2.3E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_14605 2eeb77a87ac953d4ce477e162a8f7536 104 Pfam PF03551 Transcriptional regulator PadR-like family 18 84 2.7E-13 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal N288_14605 2eeb77a87ac953d4ce477e162a8f7536 104 SUPERFAMILY SSF46785 6 100 4.88E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_22135 7824fb358d239af14f4ce3e58630d46a 292 SUPERFAMILY SSF48452 135 284 6.13E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_22135 7824fb358d239af14f4ce3e58630d46a 292 Pfam PF12844 Helix-turn-helix domain 7 65 9.8E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_22135 7824fb358d239af14f4ce3e58630d46a 292 Gene3D G3DSA:1.25.40.10 1 289 3.6E-86 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_22135 7824fb358d239af14f4ce3e58630d46a 292 Pfam PF13181 Tetratricopeptide repeat 200 227 0.057 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_22135 7824fb358d239af14f4ce3e58630d46a 292 SMART SM00530 9 63 2.8E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_22135 7824fb358d239af14f4ce3e58630d46a 292 SMART SM00028 239 272 160.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_22135 7824fb358d239af14f4ce3e58630d46a 292 SMART SM00028 199 234 35.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_22135 7824fb358d239af14f4ce3e58630d46a 292 SMART SM00028 156 189 28.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 N288_22135 7824fb358d239af14f4ce3e58630d46a 292 SUPERFAMILY SSF47413 6 65 1.38E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_22285 071a643e5fe6dc0134bb15531330bf32 389 PIRSF PIRSF026508 29 389 3.4E-119 T 12-10-2018 IPR008863 Toxic anion resistance N288_22285 071a643e5fe6dc0134bb15531330bf32 389 Pfam PF05816 Toxic anion resistance protein (TelA) 58 385 4.7E-126 T 12-10-2018 IPR008863 Toxic anion resistance N288_07745 c3e16de9e14e141e158d6e318cb2abe0 619 Gene3D G3DSA:3.30.70.1450 534 616 4.4E-20 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 N288_07745 c3e16de9e14e141e158d6e318cb2abe0 619 SUPERFAMILY SSF51735 404 516 2.66E-9 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_07745 c3e16de9e14e141e158d6e318cb2abe0 619 Gene3D G3DSA:3.40.50.720 404 532 2.0E-9 T 12-10-2018 N288_07745 c3e16de9e14e141e158d6e318cb2abe0 619 Gene3D G3DSA:1.20.1530.20 5 402 2.7E-70 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily N288_07745 c3e16de9e14e141e158d6e318cb2abe0 619 Pfam PF00999 Sodium/hydrogen exchanger family 11 389 1.2E-74 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 N288_07745 c3e16de9e14e141e158d6e318cb2abe0 619 SUPERFAMILY SSF116726 541 612 7.32E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 N288_07745 c3e16de9e14e141e158d6e318cb2abe0 619 Pfam PF02080 TrkA-C domain 549 613 1.3E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 N288_07745 c3e16de9e14e141e158d6e318cb2abe0 619 Pfam PF02254 TrkA-N domain 406 514 8.0E-6 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 N288_24785 552ffb3dedf9575f4f21c368108015ed 190 Pfam PF13649 Methyltransferase domain 43 144 1.3E-7 T 12-10-2018 N288_24785 552ffb3dedf9575f4f21c368108015ed 190 Gene3D G3DSA:3.40.50.150 15 182 1.1E-16 T 12-10-2018 N288_24785 552ffb3dedf9575f4f21c368108015ed 190 SUPERFAMILY SSF53335 6 159 8.52E-25 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_18420 e64bde6f4eac66eca083c5be89189b39 397 TIGRFAM TIGR02876 spore_yqfD: sporulation protein YqfD 6 387 2.9E-126 T 12-10-2018 IPR010690 Putative stage IV sporulation YqfD N288_18420 e64bde6f4eac66eca083c5be89189b39 397 PIRSF PIRSF029895 1 397 1.0E-174 T 12-10-2018 IPR010690 Putative stage IV sporulation YqfD N288_18420 e64bde6f4eac66eca083c5be89189b39 397 Pfam PF06898 Putative stage IV sporulation protein YqfD 8 385 3.0E-126 T 12-10-2018 IPR010690 Putative stage IV sporulation YqfD N288_25305 77829dd6989406422d8d315e53c18531 197 Gene3D G3DSA:3.40.50.360 4 197 1.3E-41 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_25305 77829dd6989406422d8d315e53c18531 197 Pfam PF03358 NADPH-dependent FMN reductase 22 152 5.5E-29 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 N288_25305 77829dd6989406422d8d315e53c18531 197 SUPERFAMILY SSF52218 18 185 2.48E-31 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_02230 47299f07fcd92307c54b5e59762f1b04 246 Pfam PF08876 Domain of unknown function (DUF1836) 71 163 2.1E-15 T 12-10-2018 IPR014975 Protein of unknown function DUF1836 N288_17900 3cc9251752307d183a4d7a7eebff36b9 241 SUPERFAMILY SSF52141 36 236 6.1E-15 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 N288_17900 3cc9251752307d183a4d7a7eebff36b9 241 ProDom PD315856 ORF119 CPE0798 YOXB 6 240 5.0E-56 T 12-10-2018 IPR020530 Uncharacterised protein family, YoxB N288_00390 ee82bc2b94a1a6970855ac71145c996b 135 Pfam PF04977 Septum formation initiator 47 122 1.9E-14 T 12-10-2018 IPR007060 Septum formation initiator FtsL/DivIC N288_05265 beab831991837fbc29ca60439f5a3109 208 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 208 28.962 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 N288_05265 beab831991837fbc29ca60439f5a3109 208 SUPERFAMILY SSF52218 1 208 2.68E-50 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_05265 beab831991837fbc29ca60439f5a3109 208 Pfam PF02525 Flavodoxin-like fold 3 203 4.8E-42 T 12-10-2018 IPR003680 Flavodoxin-like fold N288_05265 beab831991837fbc29ca60439f5a3109 208 Gene3D G3DSA:3.40.50.360 1 208 1.7E-59 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_01080 e898cab8e2803057d382d54373e6808f 92 PIRSF PIRSF037672 1 92 2.0E-41 T 12-10-2018 IPR017259 Uncharacterised conserved protein UCP037672 N288_01080 e898cab8e2803057d382d54373e6808f 92 Pfam PF12650 Domain of unknown function (DUF3784) 6 86 9.7E-14 T 12-10-2018 IPR017259 Uncharacterised conserved protein UCP037672 N288_17205 b2403e897ae265ac743b734a2fdee69d 152 Pfam PF10864 Protein of unknown function (DUF2663) 19 150 4.6E-51 T 12-10-2018 IPR020210 Uncharacterised protein family, YpbF, transmembrane N288_17205 b2403e897ae265ac743b734a2fdee69d 152 ProDom PD089241 YPBF MEMBRANE BH1610 TRANSMEMBRANE 17 150 5.0E-15 T 12-10-2018 IPR020210 Uncharacterised protein family, YpbF, transmembrane N288_05930 ca19da1aceb609f22beed49130ef8fe9 346 Gene3D G3DSA:3.30.360.10 128 341 5.3E-98 T 12-10-2018 N288_05930 ca19da1aceb609f22beed49130ef8fe9 346 Gene3D G3DSA:3.40.50.720 7 319 5.3E-98 T 12-10-2018 N288_05930 ca19da1aceb609f22beed49130ef8fe9 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 123 7.3E-32 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 N288_05930 ca19da1aceb609f22beed49130ef8fe9 346 SUPERFAMILY SSF55347 132 311 6.38E-28 T 12-10-2018 N288_05930 ca19da1aceb609f22beed49130ef8fe9 346 SUPERFAMILY SSF51735 2 183 5.01E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_05930 ca19da1aceb609f22beed49130ef8fe9 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 225 3.1E-9 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 N288_15560 b2ee5310fef45293ecf4254606be4eaa 287 Pfam PF05067 Manganese containing catalase 1 271 5.4E-125 T 12-10-2018 IPR007760 Manganese catalase N288_15560 b2ee5310fef45293ecf4254606be4eaa 287 SUPERFAMILY SSF47240 1 272 3.2E-101 T 12-10-2018 IPR009078 Ferritin-like superfamily N288_15560 b2ee5310fef45293ecf4254606be4eaa 287 Gene3D G3DSA:1.20.1260.10 1 198 5.2E-72 T 12-10-2018 IPR012347 Ferritin-like N288_15560 b2ee5310fef45293ecf4254606be4eaa 287 Gene3D G3DSA:3.30.1530.10 207 270 4.2E-13 T 12-10-2018 IPR027407 Manganese catalase, C-terminal N288_14355 f2e7e44688aa8a2b4db455dc609bb328 160 Pfam PF12688 Tetratrico peptide repeat 36 155 3.9E-15 T 12-10-2018 N288_14355 f2e7e44688aa8a2b4db455dc609bb328 160 Gene3D G3DSA:1.25.40.10 45 153 5.7E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_14355 f2e7e44688aa8a2b4db455dc609bb328 160 SUPERFAMILY SSF48452 5 141 5.22E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_02265 79ad6da9e6e788aa2884ab9bccd29325 142 Pfam PF04542 Sigma-70 region 2 20 87 6.2E-12 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 N288_02265 79ad6da9e6e788aa2884ab9bccd29325 142 SUPERFAMILY SSF88946 5 101 1.26E-22 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 N288_02265 79ad6da9e6e788aa2884ab9bccd29325 142 Gene3D G3DSA:1.10.1740.10 4 87 2.7E-19 T 12-10-2018 N288_02265 79ad6da9e6e788aa2884ab9bccd29325 142 Gene3D G3DSA:1.10.10.10 88 141 1.9E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_09610 7ef1fa86048804debd2babe12ae6f958 183 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 11 176 1.2E-56 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 N288_09610 7ef1fa86048804debd2babe12ae6f958 183 ProSitePatterns PS00761 Signal peptidases I signature 3. 141 154 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 N288_09610 7ef1fa86048804debd2babe12ae6f958 183 SUPERFAMILY SSF51306 26 182 6.02E-54 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily N288_09610 7ef1fa86048804debd2babe12ae6f958 183 ProSitePatterns PS00501 Signal peptidases I serine active site. 37 44 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 N288_09610 7ef1fa86048804debd2babe12ae6f958 183 Gene3D G3DSA:2.10.109.10 58 182 1.4E-45 T 12-10-2018 N288_09610 7ef1fa86048804debd2babe12ae6f958 183 ProSitePatterns PS00760 Signal peptidases I lysine active site. 80 92 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 N288_09610 7ef1fa86048804debd2babe12ae6f958 183 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 28 44 8.0E-22 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 N288_09610 7ef1fa86048804debd2babe12ae6f958 183 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 136 155 8.0E-22 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 N288_09610 7ef1fa86048804debd2babe12ae6f958 183 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 78 90 8.0E-22 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 N288_09610 7ef1fa86048804debd2babe12ae6f958 183 Pfam PF00717 Peptidase S24-like 35 102 5.0E-22 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C N288_01140 2dee537f41517c7bdc67d410862b37cf 273 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 272 18.039 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 N288_01140 2dee537f41517c7bdc67d410862b37cf 273 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 265 8.5E-96 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 N288_01140 2dee537f41517c7bdc67d410862b37cf 273 Pfam PF02673 Bacitracin resistance protein BacA 7 267 9.1E-83 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 N288_06920 276652150267ff58bbcee65a542867f1 503 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 38 503 1.6E-142 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 N288_06920 276652150267ff58bbcee65a542867f1 503 Hamap MF_01916 Cardiolipin synthase. 34 503 39.509 T 12-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 N288_06920 276652150267ff58bbcee65a542867f1 503 SUPERFAMILY SSF56024 104 333 2.86E-51 T 12-10-2018 N288_06920 276652150267ff58bbcee65a542867f1 503 SMART SM00155 416 443 2.0E-5 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 N288_06920 276652150267ff58bbcee65a542867f1 503 SMART SM00155 237 264 3.6E-4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 N288_06920 276652150267ff58bbcee65a542867f1 503 Gene3D G3DSA:3.30.870.10 132 330 1.9E-43 T 12-10-2018 N288_06920 276652150267ff58bbcee65a542867f1 503 Gene3D G3DSA:3.30.870.10 331 473 3.9E-29 T 12-10-2018 N288_06920 276652150267ff58bbcee65a542867f1 503 SUPERFAMILY SSF56024 289 489 1.48E-46 T 12-10-2018 N288_06920 276652150267ff58bbcee65a542867f1 503 Pfam PF13396 Phospholipase_D-nuclease N-terminal 41 81 9.6E-6 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal N288_06920 276652150267ff58bbcee65a542867f1 503 Pfam PF13091 PLD-like domain 154 277 2.0E-13 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 N288_06920 276652150267ff58bbcee65a542867f1 503 Pfam PF13091 PLD-like domain 346 470 2.7E-28 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 N288_01400 73e4ea409e21061c1922eab872b5dec2 127 Pfam PF12681 Glyoxalase-like domain 6 125 1.7E-31 T 12-10-2018 IPR025870 Glyoxalase-like domain N288_01400 73e4ea409e21061c1922eab872b5dec2 127 SUPERFAMILY SSF54593 4 125 6.18E-27 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_01400 73e4ea409e21061c1922eab872b5dec2 127 Gene3D G3DSA:3.10.180.10 8 127 2.6E-27 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_11795 27c218aafb96b15e219ab14c6b659490 137 Pfam PF13380 CoA binding domain 19 133 1.3E-37 T 12-10-2018 IPR003781 CoA-binding GO:0048037 N288_11795 27c218aafb96b15e219ab14c6b659490 137 SUPERFAMILY SSF51735 10 136 4.92E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_11795 27c218aafb96b15e219ab14c6b659490 137 SMART SM00881 15 107 3.6E-15 T 12-10-2018 IPR003781 CoA-binding GO:0048037 N288_11795 27c218aafb96b15e219ab14c6b659490 137 Gene3D G3DSA:3.40.50.720 1 137 1.4E-37 T 12-10-2018 N288_21015 5e1d3985e9531986b035ac7421a2ef23 409 Pfam PF13180 PDZ domain 328 402 1.8E-16 T 12-10-2018 IPR001478 PDZ domain GO:0005515 N288_21015 5e1d3985e9531986b035ac7421a2ef23 409 Gene3D G3DSA:2.40.10.10 190 306 8.7E-42 T 12-10-2018 N288_21015 5e1d3985e9531986b035ac7421a2ef23 409 Pfam PF13365 Trypsin-like peptidase domain 125 269 3.6E-31 T 12-10-2018 N288_21015 5e1d3985e9531986b035ac7421a2ef23 409 SMART SM00228 280 393 7.4E-11 T 12-10-2018 IPR001478 PDZ domain GO:0005515 N288_21015 5e1d3985e9531986b035ac7421a2ef23 409 Gene3D G3DSA:2.40.10.10 75 187 1.0E-26 T 12-10-2018 N288_21015 5e1d3985e9531986b035ac7421a2ef23 409 SUPERFAMILY SSF50494 88 304 3.81E-56 T 12-10-2018 IPR009003 Peptidase S1, PA clan N288_21015 5e1d3985e9531986b035ac7421a2ef23 409 PRINTS PR00834 HtrA/DegQ protease family signature 199 223 4.8E-42 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_21015 5e1d3985e9531986b035ac7421a2ef23 409 PRINTS PR00834 HtrA/DegQ protease family signature 240 257 4.8E-42 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_21015 5e1d3985e9531986b035ac7421a2ef23 409 PRINTS PR00834 HtrA/DegQ protease family signature 262 279 4.8E-42 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_21015 5e1d3985e9531986b035ac7421a2ef23 409 PRINTS PR00834 HtrA/DegQ protease family signature 350 362 4.8E-42 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_21015 5e1d3985e9531986b035ac7421a2ef23 409 PRINTS PR00834 HtrA/DegQ protease family signature 158 178 4.8E-42 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_21015 5e1d3985e9531986b035ac7421a2ef23 409 PRINTS PR00834 HtrA/DegQ protease family signature 137 149 4.8E-42 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 N288_21015 5e1d3985e9531986b035ac7421a2ef23 409 Gene3D G3DSA:2.30.42.10 307 407 1.4E-22 T 12-10-2018 N288_21015 5e1d3985e9531986b035ac7421a2ef23 409 SUPERFAMILY SSF50156 292 401 5.65E-21 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 N288_25775 fa033ef668578d74eb6b90070db693ef 415 Gene3D G3DSA:2.60.60.30 18 167 2.1E-22 T 12-10-2018 N288_25775 fa033ef668578d74eb6b90070db693ef 415 Pfam PF02342 TerD domain 19 168 2.7E-20 T 12-10-2018 IPR003325 TerD domain N288_24405 e7bd178eee11d98b3b2c36371f2c2afd 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 114 8.2E-15 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_24405 e7bd178eee11d98b3b2c36371f2c2afd 125 ProSitePatterns PS00934 Glyoxalase I signature 1. 9 30 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 N288_24405 e7bd178eee11d98b3b2c36371f2c2afd 125 SUPERFAMILY SSF54593 3 122 2.82E-27 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_24405 e7bd178eee11d98b3b2c36371f2c2afd 125 Gene3D G3DSA:3.10.180.10 4 124 1.3E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_02965 2ebfb8cdc40deb090f837435c8ecad68 144 Pfam PF13789 Domain of unknown function (DUF4181) 24 136 1.2E-31 T 12-10-2018 IPR025441 Protein of unknown function DUF4181 N288_08045 6e5e1762631000db96857006044cf508 448 PIRSF PIRSF005690 5 447 1.4E-121 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 N288_08045 6e5e1762631000db96857006044cf508 448 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 15 441 1.8E-121 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 N288_05665 0c8fefbe82981b64be3742b0f835bd2a 261 SUPERFAMILY SSF51735 15 259 4.54E-80 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_05665 0c8fefbe82981b64be3742b0f835bd2a 261 Gene3D G3DSA:3.40.50.720 14 261 2.2E-79 T 12-10-2018 N288_05665 0c8fefbe82981b64be3742b0f835bd2a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 2.7E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05665 0c8fefbe82981b64be3742b0f835bd2a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 2.7E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05665 0c8fefbe82981b64be3742b0f835bd2a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 2.7E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05665 0c8fefbe82981b64be3742b0f835bd2a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 2.7E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05665 0c8fefbe82981b64be3742b0f835bd2a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 2.7E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05665 0c8fefbe82981b64be3742b0f835bd2a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 2.7E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05665 0c8fefbe82981b64be3742b0f835bd2a 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 2.9E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05665 0c8fefbe82981b64be3742b0f835bd2a 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 2.9E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05665 0c8fefbe82981b64be3742b0f835bd2a 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 2.9E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05665 0c8fefbe82981b64be3742b0f835bd2a 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 258 6.1E-68 T 12-10-2018 N288_07060 d23fd396456cf34ab7fcca1965568246 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_07060 d23fd396456cf34ab7fcca1965568246 264 Pfam PF00005 ABC transporter 22 177 1.1E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_07060 d23fd396456cf34ab7fcca1965568246 264 SUPERFAMILY SSF52540 2 232 1.97E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_07060 d23fd396456cf34ab7fcca1965568246 264 Gene3D G3DSA:3.40.50.300 1 261 1.8E-60 T 12-10-2018 N288_07060 d23fd396456cf34ab7fcca1965568246 264 SMART SM00382 31 233 8.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_22620 6f2004d6d9d86fb48a2a2fb580e14108 612 SUPERFAMILY SSF63829 112 366 2.88E-5 T 12-10-2018 N288_22620 6f2004d6d9d86fb48a2a2fb580e14108 612 SUPERFAMILY SSF69322 288 528 5.23E-5 T 12-10-2018 N288_15980 e854fe32dbe5ad3b6304ec379b2ab6ea 260 Pfam PF02673 Bacitracin resistance protein BacA 7 249 1.3E-67 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 N288_15980 e854fe32dbe5ad3b6304ec379b2ab6ea 260 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 255 16.056 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 N288_05175 25088ddc9b95dba99a7c126e8a756131 788 Pfam PF00348 Polyprenyl synthetase 528 746 4.5E-45 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 N288_05175 25088ddc9b95dba99a7c126e8a756131 788 SUPERFAMILY SSF48576 280 394 5.44E-5 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily N288_05175 25088ddc9b95dba99a7c126e8a756131 788 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 578 594 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site N288_05175 25088ddc9b95dba99a7c126e8a756131 788 Gene3D G3DSA:1.10.600.10 498 785 6.4E-71 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily N288_05175 25088ddc9b95dba99a7c126e8a756131 788 SUPERFAMILY SSF48576 504 768 2.24E-62 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily N288_04525 61277b993e21d3a7549795149f1698ed 133 Pfam PF08570 Protein of unknown function (DUF1761) 12 129 1.1E-16 T 12-10-2018 IPR013879 Protein of unknown function DUF1761 N288_17160 9c6c45a24fdc24dcc10bab3c6f14559d 229 PIRSF PIRSF016933 1 220 2.1E-86 T 12-10-2018 IPR023596 Peptidase PrsW, archaeal/bacterial GO:0008233 N288_17160 9c6c45a24fdc24dcc10bab3c6f14559d 229 Pfam PF13367 Protease prsW family 28 199 1.6E-35 T 12-10-2018 IPR026898 Protease PrsW GO:0008233 N288_13670 9875cdbed2e706f034f1341a550476c3 148 Gene3D G3DSA:3.30.428.10 3 142 1.6E-30 T 12-10-2018 IPR036265 HIT-like superfamily N288_13670 9875cdbed2e706f034f1341a550476c3 148 PRINTS PR00332 Histidine triad family signature 7 23 6.8E-6 T 12-10-2018 IPR001310 Histidine triad (HIT) protein N288_13670 9875cdbed2e706f034f1341a550476c3 148 PRINTS PR00332 Histidine triad family signature 93 103 6.8E-6 T 12-10-2018 IPR001310 Histidine triad (HIT) protein N288_13670 9875cdbed2e706f034f1341a550476c3 148 PRINTS PR00332 Histidine triad family signature 28 46 6.8E-6 T 12-10-2018 IPR001310 Histidine triad (HIT) protein N288_13670 9875cdbed2e706f034f1341a550476c3 148 SUPERFAMILY SSF54197 3 111 1.7E-29 T 12-10-2018 IPR036265 HIT-like superfamily N288_13670 9875cdbed2e706f034f1341a550476c3 148 Pfam PF01230 HIT domain 16 107 1.7E-17 T 12-10-2018 IPR001310 Histidine triad (HIT) protein N288_15775 dcbc3be08229fc33c0388ef6756616c4 404 SMART SM00448 1 122 4.9E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_15775 dcbc3be08229fc33c0388ef6756616c4 404 SUPERFAMILY SSF52172 1 132 1.17E-35 T 12-10-2018 IPR011006 CheY-like superfamily N288_15775 dcbc3be08229fc33c0388ef6756616c4 404 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 190 379 1.7E-32 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_15775 dcbc3be08229fc33c0388ef6756616c4 404 SMART SM00331 163 379 1.6E-22 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_15775 dcbc3be08229fc33c0388ef6756616c4 404 Gene3D G3DSA:3.60.40.10 133 380 6.5E-46 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_15775 dcbc3be08229fc33c0388ef6756616c4 404 Gene3D G3DSA:3.40.50.2300 1 132 4.8E-37 T 12-10-2018 N288_15775 dcbc3be08229fc33c0388ef6756616c4 404 SUPERFAMILY SSF81606 179 378 1.12E-8 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_15775 dcbc3be08229fc33c0388ef6756616c4 404 Pfam PF00072 Response regulator receiver domain 3 122 2.0E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_16180 182b1921fdebf5b3ac686badd8b65bd4 91 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 3 49 2.0E-11 T 12-10-2018 IPR022453 Zinc finger, MqsA-type N288_16180 182b1921fdebf5b3ac686badd8b65bd4 91 Pfam PF14122 YokU-like protein, putative antitoxin 2 88 1.7E-43 T 12-10-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU N288_16180 182b1921fdebf5b3ac686badd8b65bd4 91 TIGRFAM TIGR03829 YokU_near_AblA: uncharacterized protein, YokU family 2 90 3.0E-41 T 12-10-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU N288_07570 2d564d247a8414e071e12091413918f1 261 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 65 254 1.1E-63 T 12-10-2018 IPR018728 Domain of unknown function DUF2268 N288_02820 076944f75b76368fc2ae38b46ba901b0 307 SMART SM00382 31 207 4.9E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_02820 076944f75b76368fc2ae38b46ba901b0 307 Gene3D G3DSA:3.40.50.300 1 232 5.7E-62 T 12-10-2018 N288_02820 076944f75b76368fc2ae38b46ba901b0 307 SUPERFAMILY SSF52540 4 226 6.38E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_02820 076944f75b76368fc2ae38b46ba901b0 307 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_02820 076944f75b76368fc2ae38b46ba901b0 307 Pfam PF00005 ABC transporter 22 158 4.5E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_20230 3b1878a301025829920112b60206e9fc 124 Pfam PF04134 Protein of unknown function, DUF393 6 115 2.0E-19 T 12-10-2018 IPR007263 Protein of unknown function DUF393 N288_05540 e299ff285645743bc9d38fd25453beb4 249 Gene3D G3DSA:3.20.20.190 2 242 1.1E-69 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 N288_05540 e299ff285645743bc9d38fd25453beb4 249 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 9 234 6.7E-31 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 N288_05540 e299ff285645743bc9d38fd25453beb4 249 SUPERFAMILY SSF51695 6 238 1.83E-64 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 N288_18805 495a2e36f8a276fb0d848bc6ec5ecb2c 254 SUPERFAMILY SSF69572 4 245 2.88E-64 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 N288_18805 495a2e36f8a276fb0d848bc6ec5ecb2c 254 Gene3D G3DSA:3.40.50.720 1 254 1.2E-82 T 12-10-2018 N288_18805 495a2e36f8a276fb0d848bc6ec5ecb2c 254 Pfam PF00899 ThiF family 6 158 9.7E-41 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 N288_22560 3a278440e1a347eaa257a177065b04b7 415 Pfam PF01566 Natural resistance-associated macrophage protein 46 387 1.8E-73 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 N288_14415 965374ac3a06ab1377e9a752f314963a 241 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 17 227 6.2E-52 T 12-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related N288_13010 092371867ac9915255367b713684db96 283 SUPERFAMILY SSF54593 6 169 6.06E-38 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_13010 092371867ac9915255367b713684db96 283 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 170 259 9.3E-5 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_13010 092371867ac9915255367b713684db96 283 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 124 1.3E-12 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain N288_13010 092371867ac9915255367b713684db96 283 ProSitePatterns PS00934 Glyoxalase I signature 1. 172 193 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 N288_13010 092371867ac9915255367b713684db96 283 Gene3D G3DSA:3.10.180.10 168 283 1.9E-20 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_13010 092371867ac9915255367b713684db96 283 Gene3D G3DSA:3.10.180.10 11 135 1.8E-28 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_13010 092371867ac9915255367b713684db96 283 SUPERFAMILY SSF54593 170 279 4.95E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_00030 f75dc8266dcc2b0155acce14f3eb68a8 81 Pfam PF04025 Domain of unknown function (DUF370) 3 72 1.1E-13 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A N288_12280 f7080bb0275cc45d9c4c7c090fe6e348 494 Gene3D G3DSA:3.40.605.10 24 487 1.1E-203 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 N288_12280 f7080bb0275cc45d9c4c7c090fe6e348 494 Gene3D G3DSA:3.40.309.10 270 459 1.1E-203 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 N288_12280 f7080bb0275cc45d9c4c7c090fe6e348 494 SUPERFAMILY SSF53720 19 492 1.57E-184 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 N288_12280 f7080bb0275cc45d9c4c7c090fe6e348 494 Pfam PF00171 Aldehyde dehydrogenase family 28 489 9.1E-192 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 N288_12280 f7080bb0275cc45d9c4c7c090fe6e348 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 N288_23410 2ea2554c8c3becfe8c82391310e878c8 491 Pfam PF00395 S-layer homology domain 318 353 0.003 T 12-10-2018 IPR001119 S-layer homology domain N288_23410 2ea2554c8c3becfe8c82391310e878c8 491 Pfam PF00395 S-layer homology domain 380 418 0.0024 T 12-10-2018 IPR001119 S-layer homology domain N288_23410 2ea2554c8c3becfe8c82391310e878c8 491 SUPERFAMILY SSF53955 46 185 3.84E-9 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily N288_18245 e709dce22909c63bcb415c806968b6a1 257 Pfam PF06691 Protein of unknown function (DUF1189) 4 247 1.5E-78 T 12-10-2018 IPR009574 Protein of unknown function DUF1189 N288_19795 f0fef059f82318ac595690e526d89e07 308 SUPERFAMILY SSF103481 215 291 3.66E-8 T 12-10-2018 N288_19795 f0fef059f82318ac595690e526d89e07 308 SUPERFAMILY SSF103481 42 150 6.15E-12 T 12-10-2018 N288_19795 f0fef059f82318ac595690e526d89e07 308 Pfam PF00892 EamA-like transporter family 157 287 4.3E-7 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_19795 f0fef059f82318ac595690e526d89e07 308 Pfam PF00892 EamA-like transporter family 9 148 1.2E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_19795 f0fef059f82318ac595690e526d89e07 308 TIGRFAM TIGR00688 rarD: protein RarD 8 265 1.1E-81 T 12-10-2018 IPR004626 RarD protein GO:0005887 N288_21460 35fadf8a6c99afd57e7ee16d04bf3d4f 213 Pfam PF04116 Fatty acid hydroxylase superfamily 47 186 2.3E-20 T 12-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 N288_22320 ff5174f802666cb5beace4294ddaae6c 426 Gene3D G3DSA:1.10.287.950 100 423 3.7E-66 T 12-10-2018 N288_22320 ff5174f802666cb5beace4294ddaae6c 426 SUPERFAMILY SSF58104 96 423 3.4E-62 T 12-10-2018 N288_22320 ff5174f802666cb5beace4294ddaae6c 426 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 194 374 8.8E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_22320 ff5174f802666cb5beace4294ddaae6c 426 SMART SM00283 148 423 2.7E-50 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_01650 bb288d2f7e3a6c425f169594e8af8624 180 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 114 166 3.5E-8 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 N288_01650 bb288d2f7e3a6c425f169594e8af8624 180 Hamap MF_01515 UPF0316 protein . 6 174 31.939 T 12-10-2018 IPR022930 Protein of unknown function UPF0316 N288_11270 7a4ef9ca74254447c3ba8aa0933023c6 272 Gene3D G3DSA:1.20.1260.10 7 272 1.7E-80 T 12-10-2018 IPR012347 Ferritin-like N288_11270 7a4ef9ca74254447c3ba8aa0933023c6 272 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 25 272 1.3E-65 T 12-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 N288_11270 7a4ef9ca74254447c3ba8aa0933023c6 272 SUPERFAMILY SSF47240 17 266 1.62E-55 T 12-10-2018 IPR009078 Ferritin-like superfamily N288_11270 7a4ef9ca74254447c3ba8aa0933023c6 272 Pfam PF05138 Phenylacetic acid catabolic protein 8 272 4.1E-68 T 12-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 N288_11270 7a4ef9ca74254447c3ba8aa0933023c6 272 PIRSF PIRSF037834 7 272 1.2E-92 T 12-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 N288_00230 8c5e662050320700024cec3dcf4b6254 122 PIRSF PIRSF021439 1 122 5.0E-43 T 12-10-2018 IPR010377 Initiation control protein YabA GO:0006260 N288_00230 8c5e662050320700024cec3dcf4b6254 122 Pfam PF06156 Initiation control protein YabA 2 117 4.2E-36 T 12-10-2018 IPR010377 Initiation control protein YabA GO:0006260 N288_00230 8c5e662050320700024cec3dcf4b6254 122 Hamap MF_01159 Initiation-control protein YabA. 1 121 25.254 T 12-10-2018 IPR010377 Initiation control protein YabA GO:0006260 N288_04440 b24f9217368048560beaa1129f4a3ade 608 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 260 285 6.5E-7 T 12-10-2018 IPR023908 xxxLxxG heptad repeat N288_04440 b24f9217368048560beaa1129f4a3ade 608 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 499 525 3.4E-4 T 12-10-2018 IPR023908 xxxLxxG heptad repeat N288_24015 b17e5d86335d654b883010c7a914566d 62 Gene3D G3DSA:3.30.429.10 1 60 4.3E-27 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily N288_24015 b17e5d86335d654b883010c7a914566d 62 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 60 2.9E-27 T 12-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 N288_24015 b17e5d86335d654b883010c7a914566d 62 Pfam PF01361 Tautomerase enzyme 2 60 1.2E-23 T 12-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 N288_24015 b17e5d86335d654b883010c7a914566d 62 SUPERFAMILY SSF55331 2 60 3.66E-19 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily N288_04265 9ffd3e5576b1de987bca6d3e6abc5e72 565 SUPERFAMILY SSF55486 34 535 4.08E-70 T 12-10-2018 N288_04265 9ffd3e5576b1de987bca6d3e6abc5e72 565 Gene3D G3DSA:1.10.1370.30 12 565 1.3E-135 T 12-10-2018 N288_04265 9ffd3e5576b1de987bca6d3e6abc5e72 565 TIGRFAM TIGR02289 M3_not_pepF: oligoendopeptidase, M3 family 21 564 2.4E-176 T 12-10-2018 IPR011976 Peptidase M3B, oligoendopeptidase-related N288_04265 9ffd3e5576b1de987bca6d3e6abc5e72 565 Pfam PF01432 Peptidase family M3 172 533 6.0E-31 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 N288_06740 112bfb3c7935b006a99eecd589861f37 210 Pfam PF01810 LysE type translocator 14 204 5.5E-35 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 N288_13535 2428ee1c429c3035decf709621140828 117 Pfam PF01541 GIY-YIG catalytic domain 18 106 4.2E-7 T 12-10-2018 IPR000305 GIY-YIG endonuclease N288_13535 2428ee1c429c3035decf709621140828 117 Gene3D G3DSA:3.40.1440.10 16 117 2.9E-17 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 N288_13535 2428ee1c429c3035decf709621140828 117 SUPERFAMILY SSF82771 18 107 3.4E-8 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 N288_24350 f36dfb52a6b61577036bd560c5a0c176 329 Pfam PF00535 Glycosyl transferase family 2 8 163 1.8E-30 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 N288_24350 f36dfb52a6b61577036bd560c5a0c176 329 Gene3D G3DSA:3.90.550.10 1 258 2.8E-49 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_24350 f36dfb52a6b61577036bd560c5a0c176 329 SUPERFAMILY SSF53448 5 227 8.44E-50 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_16955 9818c69af0c1598ed0ea2b738194f1b1 197 Pfam PF07187 Protein of unknown function (DUF1405) 24 181 7.8E-57 T 12-10-2018 IPR009845 Protein of unknown function DUF1405 N288_12695 ddea31c1ab89e484e55cfbeae80552b0 83 Pfam PF10719 Late competence development protein ComFB 1 81 3.3E-19 T 12-10-2018 IPR019657 Late competence development protein ComFB N288_10615 667cd31399aa91880cea41eaf27e69fc 133 SUPERFAMILY SSF46785 2 128 2.16E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_10615 667cd31399aa91880cea41eaf27e69fc 133 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 125 6.3E-34 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type N288_10615 667cd31399aa91880cea41eaf27e69fc 133 Pfam PF02082 Transcriptional regulator 1 83 5.8E-27 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type N288_10615 667cd31399aa91880cea41eaf27e69fc 133 Gene3D G3DSA:1.10.10.10 1 133 1.2E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_10615 667cd31399aa91880cea41eaf27e69fc 133 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site N288_01210 39123c2e8e9949ba779689b5d1d93228 439 Pfam PF02386 Cation transport protein 41 427 3.9E-65 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 N288_01210 39123c2e8e9949ba779689b5d1d93228 439 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 28 410 1.1E-118 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 N288_22475 b0d8c40c16fb9cac0e02e626ae01acc2 181 SUPERFAMILY SSF53697 3 161 9.51E-26 T 12-10-2018 N288_22475 b0d8c40c16fb9cac0e02e626ae01acc2 181 Pfam PF01380 SIS domain 33 113 7.1E-8 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 N288_22475 b0d8c40c16fb9cac0e02e626ae01acc2 181 Gene3D G3DSA:3.40.50.10490 1 181 8.1E-40 T 12-10-2018 N288_25610 0adc06c758a79a8153d0cbcace1c5554 592 Pfam PF00999 Sodium/hydrogen exchanger family 3 387 1.8E-33 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 N288_25610 0adc06c758a79a8153d0cbcace1c5554 592 Gene3D G3DSA:1.20.1530.20 1 390 5.3E-16 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily N288_14000 d59419e6b040d8f6101aa8a0b702577a 158 Pfam PF11188 Protein of unknown function (DUF2975) 31 158 8.0E-36 T 12-10-2018 IPR021354 Protein of unknown function DUF2975 N288_19335 3713162a15fbd62bb1286dedf251c3c9 153 Gene3D G3DSA:1.10.10.10 6 152 6.6E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_19335 3713162a15fbd62bb1286dedf251c3c9 153 SMART SM00347 36 136 2.5E-27 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_19335 3713162a15fbd62bb1286dedf251c3c9 153 SUPERFAMILY SSF46785 10 151 1.2E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_19335 3713162a15fbd62bb1286dedf251c3c9 153 Pfam PF01047 MarR family 43 101 1.0E-19 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_19335 3713162a15fbd62bb1286dedf251c3c9 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 77 92 1.5E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_19335 3713162a15fbd62bb1286dedf251c3c9 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 126 146 1.5E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_19335 3713162a15fbd62bb1286dedf251c3c9 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 96 112 1.5E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_12105 9bd5cfec6fd9fba8d3919f602b8a355b 689 Pfam PF00905 Penicillin binding protein transpeptidase domain 338 614 9.9E-40 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 N288_12105 9bd5cfec6fd9fba8d3919f602b8a355b 689 SUPERFAMILY SSF56601 222 622 1.02E-110 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like N288_12105 9bd5cfec6fd9fba8d3919f602b8a355b 689 SUPERFAMILY SSF53955 56 262 4.22E-73 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily N288_12105 9bd5cfec6fd9fba8d3919f602b8a355b 689 Gene3D G3DSA:3.40.710.10 268 620 1.9E-129 T 12-10-2018 N288_12105 9bd5cfec6fd9fba8d3919f602b8a355b 689 Gene3D G3DSA:1.10.3810.10 59 257 1.2E-75 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_12105 9bd5cfec6fd9fba8d3919f602b8a355b 689 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 80 617 9.8E-189 T 12-10-2018 N288_12105 9bd5cfec6fd9fba8d3919f602b8a355b 689 Pfam PF00912 Transglycosylase 75 241 2.5E-61 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_14525 d7f515a6c5d4e6a4f10c35b1be86fe04 175 Pfam PF06695 Putative small multi-drug export protein 31 143 2.8E-12 T 12-10-2018 IPR009577 Putative small multi-drug export N288_21110 d7a41f743a738143cfebb5bf07884425 465 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 10 456 5.9E-233 T 12-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 N288_21110 d7a41f743a738143cfebb5bf07884425 465 SUPERFAMILY SSF101960 32 462 2.88E-141 T 12-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily N288_21110 d7a41f743a738143cfebb5bf07884425 465 Pfam PF01458 Uncharacterized protein family (UPF0051) 211 436 1.0E-75 T 12-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 N288_23280 de7681a659c5e9bbaf899e7e64db31e7 187 Gene3D G3DSA:2.160.10.10 2 153 2.5E-42 T 12-10-2018 N288_23280 de7681a659c5e9bbaf899e7e64db31e7 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 5 30 0.0011 T 12-10-2018 IPR001451 Hexapeptide repeat N288_23280 de7681a659c5e9bbaf899e7e64db31e7 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 33 65 1.1E-8 T 12-10-2018 IPR001451 Hexapeptide repeat N288_23280 de7681a659c5e9bbaf899e7e64db31e7 187 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 111 137 0.14 T 12-10-2018 IPR001451 Hexapeptide repeat N288_23280 de7681a659c5e9bbaf899e7e64db31e7 187 SUPERFAMILY SSF51161 3 159 1.83E-43 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily N288_00350 c5d602e95e026ab629b712c1a22e5e14 76 Pfam PF10955 Protein of unknown function (DUF2757) 1 76 1.9E-35 T 12-10-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 N288_00350 c5d602e95e026ab629b712c1a22e5e14 76 ProDom PD057826 YABK 4 75 2.0E-21 T 12-10-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 N288_03590 7901fe9684c571c08f58d71773bb8553 125 Pfam PF09350 Domain of unknown function (DUF1992) 8 73 1.6E-19 T 12-10-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain N288_16935 107ef616e21e643147db88751605812a 111 SUPERFAMILY SSF101386 4 106 1.8E-26 T 12-10-2018 N288_16935 107ef616e21e643147db88751605812a 111 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 106 1.2E-18 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core N288_16935 107ef616e21e643147db88751605812a 111 Gene3D G3DSA:1.10.287.1080 3 111 1.3E-34 T 12-10-2018 N288_16935 107ef616e21e643147db88751605812a 111 PIRSF PIRSF029904 3 111 3.7E-53 T 12-10-2018 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD N288_25515 6d2ba0a5e030e223a410ff46cd91405a 231 Gene3D G3DSA:2.60.120.1460 25 218 9.9E-22 T 12-10-2018 N288_25515 6d2ba0a5e030e223a410ff46cd91405a 231 SMART SM00100 14 132 4.0E-13 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain N288_25515 6d2ba0a5e030e223a410ff46cd91405a 231 SUPERFAMILY SSF51206 28 139 6.28E-24 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like N288_25515 6d2ba0a5e030e223a410ff46cd91405a 231 Pfam PF00027 Cyclic nucleotide-binding domain 33 117 3.7E-16 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain N288_10580 28e0be5c8e36ce8d5665bdc43d2b45bf 367 SUPERFAMILY SSF51726 12 367 1.7E-78 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 N288_10580 28e0be5c8e36ce8d5665bdc43d2b45bf 367 Gene3D G3DSA:3.20.20.210 6 367 1.8E-118 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 N288_10580 28e0be5c8e36ce8d5665bdc43d2b45bf 367 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 15 362 1.3E-12 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 N288_22895 19b6fbe11b7f82f10e220f4ebb391320 421 Pfam PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal 5 237 4.6E-10 T 12-10-2018 IPR031329 Neutral/alkaline non-lysosomal ceramidase, N-terminal KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119|Reactome: R-HSA-1660662 N288_05475 fe0d9b13cb174d80856abbb06834857a 91 PIRSF PIRSF029962 1 91 4.5E-32 T 12-10-2018 IPR016941 Uncharacterised conserved protein UCP029962 N288_05475 fe0d9b13cb174d80856abbb06834857a 91 Pfam PF06803 Protein of unknown function (DUF1232) 38 69 1.4E-8 T 12-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 N288_04325 78fc1fea3906abd5badf60c5ec549bfc 443 Gene3D G3DSA:2.160.20.10 1 443 9.9E-163 T 12-10-2018 IPR012334 Pectin lyase fold N288_04325 78fc1fea3906abd5badf60c5ec549bfc 443 SUPERFAMILY SSF51126 4 375 5.89E-20 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor N288_04325 78fc1fea3906abd5badf60c5ec549bfc 443 Pfam PF05048 Periplasmic copper-binding protein (NosD) 160 305 2.0E-9 T 12-10-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 N288_18510 46f09958c198e5e002128dbdd4ad81ee 118 ProDom PD072942 YQXA ORF79 14 116 6.0E-14 T 12-10-2018 IPR020534 Uncharacterised protein family YqxA N288_18510 46f09958c198e5e002128dbdd4ad81ee 118 Pfam PF12438 Protein of unknown function (DUF3679) 13 68 7.3E-25 T 12-10-2018 IPR020534 Uncharacterised protein family YqxA N288_20385 87e590ad1590792b29f790e1b31d3805 51 Pfam PF07561 Domain of Unknown Function (DUF1540) 5 47 4.4E-16 T 12-10-2018 IPR011437 Domain of unknown function DUF1540 N288_23080 2eb073866c35ffb1d5261c1959794b8d 588 SMART SM00387 467 582 0.001 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_23080 2eb073866c35ffb1d5261c1959794b8d 588 SUPERFAMILY SSF158472 314 364 7.06E-10 T 12-10-2018 N288_23080 2eb073866c35ffb1d5261c1959794b8d 588 SMART SM00304 313 365 3.9E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_23080 2eb073866c35ffb1d5261c1959794b8d 588 Gene3D G3DSA:1.20.1480.50 280 370 5.3E-11 T 12-10-2018 N288_23080 2eb073866c35ffb1d5261c1959794b8d 588 Gene3D G3DSA:3.30.565.10 435 585 4.0E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_23080 2eb073866c35ffb1d5261c1959794b8d 588 Pfam PF06580 Histidine kinase 377 456 2.7E-25 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 N288_23080 2eb073866c35ffb1d5261c1959794b8d 588 Pfam PF00672 HAMP domain 314 360 1.3E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 N288_23080 2eb073866c35ffb1d5261c1959794b8d 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 522 3.0E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_23080 2eb073866c35ffb1d5261c1959794b8d 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 3.0E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_23080 2eb073866c35ffb1d5261c1959794b8d 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 579 3.0E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 N288_23080 2eb073866c35ffb1d5261c1959794b8d 588 SUPERFAMILY SSF55874 434 579 7.33E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_20620 6f68ecf791191495229d36a9352b6a37 269 PIRSF PIRSF006483 1 269 5.1E-89 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT N288_20620 6f68ecf791191495229d36a9352b6a37 269 Gene3D G3DSA:3.30.70.120 182 257 3.8E-21 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal N288_20620 6f68ecf791191495229d36a9352b6a37 269 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 210 264 1.3E-23 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 N288_20620 6f68ecf791191495229d36a9352b6a37 269 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 4 204 9.6E-60 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT N288_04540 292c8db12036569e16b3d04203d7c43f 131 SUPERFAMILY SSF54593 4 126 3.49E-20 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_04540 292c8db12036569e16b3d04203d7c43f 131 Gene3D G3DSA:3.10.180.10 3 129 1.1E-26 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase N288_15860 f977e52f9d24b88403e26ccfd117d75f 274 Pfam PF00583 Acetyltransferase (GNAT) family 29 96 7.5E-6 T 12-10-2018 IPR000182 GNAT domain N288_15860 f977e52f9d24b88403e26ccfd117d75f 274 Pfam PF00583 Acetyltransferase (GNAT) family 176 260 2.8E-13 T 12-10-2018 IPR000182 GNAT domain N288_15860 f977e52f9d24b88403e26ccfd117d75f 274 SUPERFAMILY SSF55729 125 269 2.53E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_15860 f977e52f9d24b88403e26ccfd117d75f 274 SUPERFAMILY SSF55729 6 125 4.91E-12 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_15860 f977e52f9d24b88403e26ccfd117d75f 274 Gene3D G3DSA:3.40.630.30 1 271 4.3E-36 T 12-10-2018 N288_03675 a462762f74e9bd7c1db725ae586f3bdc 46 SUPERFAMILY SSF47406 7 34 7.46E-7 T 12-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 N288_03675 a462762f74e9bd7c1db725ae586f3bdc 46 Pfam PF08671 Anti-repressor SinI 8 34 3.9E-13 T 12-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 N288_21475 ed76a169c3d026cb0ca0f70b1102f46c 290 SUPERFAMILY SSF52540 18 223 5.92E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_21475 ed76a169c3d026cb0ca0f70b1102f46c 290 SMART SM00382 27 205 5.8E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_21475 ed76a169c3d026cb0ca0f70b1102f46c 290 Pfam PF00005 ABC transporter 20 156 4.1E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_21475 ed76a169c3d026cb0ca0f70b1102f46c 290 Gene3D G3DSA:3.40.50.300 3 225 3.2E-43 T 12-10-2018 N288_11445 2238600584b764bdd34b6dc54bc4f930 546 Pfam PF01391 Collagen triple helix repeat (20 copies) 162 218 3.4E-7 T 12-10-2018 IPR008160 Collagen triple helix repeat N288_11445 2238600584b764bdd34b6dc54bc4f930 546 Pfam PF01391 Collagen triple helix repeat (20 copies) 119 174 2.2E-8 T 12-10-2018 IPR008160 Collagen triple helix repeat N288_11445 2238600584b764bdd34b6dc54bc4f930 546 Pfam PF01391 Collagen triple helix repeat (20 copies) 195 252 1.5E-6 T 12-10-2018 IPR008160 Collagen triple helix repeat N288_11445 2238600584b764bdd34b6dc54bc4f930 546 SUPERFAMILY SSF51126 274 531 1.6E-6 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor N288_00285 faf980543ad0c98f41b7273b9476b83a 291 Pfam PF05582 YabG peptidase U57 6 285 2.7E-117 T 12-10-2018 IPR008764 Peptidase U57, YabG N288_00285 faf980543ad0c98f41b7273b9476b83a 291 ProDom PD127708 YABG PROTEASE SPORULATION-SPECIFIC PEPTIDASE U57 BH0058 ORTHOLOG SPORE FAMILY B.SUBTILIS 3 280 4.0E-117 T 12-10-2018 IPR008764 Peptidase U57, YabG N288_00285 faf980543ad0c98f41b7273b9476b83a 291 PIRSF PIRSF011575 2 289 3.3E-117 T 12-10-2018 IPR008764 Peptidase U57, YabG N288_00285 faf980543ad0c98f41b7273b9476b83a 291 TIGRFAM TIGR02855 spore_yabG: sporulation peptidase YabG 6 286 1.1E-138 T 12-10-2018 IPR008764 Peptidase U57, YabG N288_09145 6ebd3c7388fde8b9c2b29f6920d77156 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 120 1.0E-57 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 N288_09145 6ebd3c7388fde8b9c2b29f6920d77156 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 58.407 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 N288_09145 6ebd3c7388fde8b9c2b29f6920d77156 143 Gene3D G3DSA:2.40.330.20 1 141 1.0E-53 T 12-10-2018 IPR038619 MraZ superfamily N288_09145 6ebd3c7388fde8b9c2b29f6920d77156 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 4.4E-22 T 12-10-2018 IPR020603 MraZ domain N288_09145 6ebd3c7388fde8b9c2b29f6920d77156 143 Pfam PF02381 MraZ protein, putative antitoxin-like 72 141 3.3E-27 T 12-10-2018 IPR020603 MraZ domain N288_09145 6ebd3c7388fde8b9c2b29f6920d77156 143 SUPERFAMILY SSF89447 1 136 1.78E-52 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily N288_09145 6ebd3c7388fde8b9c2b29f6920d77156 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 143 1.1E-60 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 N288_19750 26ea9a95dcf401a0d9ebc92b86d20645 279 Pfam PF12787 EcsC protein family 9 272 1.0E-56 T 12-10-2018 IPR024787 EcsC protein N288_19750 26ea9a95dcf401a0d9ebc92b86d20645 279 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 8 174 1.0E-5 T 12-10-2018 N288_21445 57b20202495cb5a992b503760303df77 87 Pfam PF02583 Metal-sensitive transcriptional repressor 8 84 1.5E-25 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 N288_21445 57b20202495cb5a992b503760303df77 87 Gene3D G3DSA:1.20.58.1000 3 87 1.3E-23 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily N288_21445 57b20202495cb5a992b503760303df77 87 ProSitePatterns PS00018 EF-hand calcium-binding domain. 63 75 - T 12-10-2018 IPR018247 EF-Hand 1, calcium-binding site N288_21520 ce2c5dbf7961a02a44e80101e7cf502f 50 Pfam PF07561 Domain of Unknown Function (DUF1540) 5 47 2.9E-13 T 12-10-2018 IPR011437 Domain of unknown function DUF1540 N288_24090 bfc088eae266a41e301d93c9d6b36f2f 258 Pfam PF14014 Protein of unknown function (DUF4230) 91 248 1.5E-29 T 12-10-2018 IPR025324 Protein of unknown function DUF4230 N288_21060 e98f2bd51c76dfbd95e2fed415432d94 330 Gene3D G3DSA:2.70.70.10 150 327 4.2E-55 T 12-10-2018 IPR011055 Duplicated hybrid motif N288_21060 e98f2bd51c76dfbd95e2fed415432d94 330 Pfam PF01551 Peptidase family M23 204 302 8.3E-19 T 12-10-2018 IPR016047 Peptidase M23 N288_21060 e98f2bd51c76dfbd95e2fed415432d94 330 SUPERFAMILY SSF51261 120 315 1.05E-31 T 12-10-2018 IPR011055 Duplicated hybrid motif N288_03950 1a15e72fa0213d9a6cee765cb3f42b90 511 Gene3D G3DSA:3.40.50.300 265 509 1.2E-43 T 12-10-2018 N288_03950 1a15e72fa0213d9a6cee765cb3f42b90 511 SMART SM00382 30 222 5.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_03950 1a15e72fa0213d9a6cee765cb3f42b90 511 SMART SM00382 281 475 1.1E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_03950 1a15e72fa0213d9a6cee765cb3f42b90 511 SUPERFAMILY SSF52540 271 487 4.09E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_03950 1a15e72fa0213d9a6cee765cb3f42b90 511 SUPERFAMILY SSF52540 5 233 1.69E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_03950 1a15e72fa0213d9a6cee765cb3f42b90 511 Pfam PF00005 ABC transporter 272 426 1.0E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_03950 1a15e72fa0213d9a6cee765cb3f42b90 511 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_03950 1a15e72fa0213d9a6cee765cb3f42b90 511 Gene3D G3DSA:3.40.50.300 3 260 2.3E-56 T 12-10-2018 N288_03950 1a15e72fa0213d9a6cee765cb3f42b90 511 Pfam PF00005 ABC transporter 21 174 5.7E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_14325 3802786c804203a3db363e01582e02e7 505 Pfam PF02517 CAAX protease self-immunity 389 495 2.0E-9 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 N288_25100 06f67889233725a5b42195d243bd669d 184 Pfam PF14417 MEDS: MEthanogen/methylotroph, DcmR Sensory domain 19 171 6.7E-28 T 12-10-2018 IPR025847 MEDS domain N288_04930 d8b6e1798f37060370e295a8c32d34df 235 Pfam PF08279 HTH domain 171 208 2.7E-5 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 N288_04930 d8b6e1798f37060370e295a8c32d34df 235 PIRSF PIRSF006171 1 227 5.5E-82 T 12-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 N288_04930 d8b6e1798f37060370e295a8c32d34df 235 Gene3D G3DSA:3.40.50.2300 1 148 1.7E-30 T 12-10-2018 N288_04930 d8b6e1798f37060370e295a8c32d34df 235 SUPERFAMILY SSF46785 168 227 1.45E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_04930 d8b6e1798f37060370e295a8c32d34df 235 Pfam PF00072 Response regulator receiver domain 4 115 8.8E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_04930 d8b6e1798f37060370e295a8c32d34df 235 SUPERFAMILY SSF52172 1 135 1.35E-32 T 12-10-2018 IPR011006 CheY-like superfamily N288_04930 d8b6e1798f37060370e295a8c32d34df 235 SMART SM00448 2 115 6.4E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 N288_00905 b67983461dd9bd8c224cb95802dcb6cf 265 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 2 265 37.986 T 12-10-2018 IPR024919 ECF transporter transmembrane protein EcfT GO:0016021|GO:0022857|GO:0055085 N288_00905 b67983461dd9bd8c224cb95802dcb6cf 265 Pfam PF02361 Cobalt transport protein 15 237 7.1E-60 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component N288_16370 046ec75d1c2da186f0bb09a52c2ef343 192 Pfam PF02342 TerD domain 1 188 4.2E-86 T 12-10-2018 IPR003325 TerD domain N288_16370 046ec75d1c2da186f0bb09a52c2ef343 192 Gene3D G3DSA:2.60.60.30 19 187 2.8E-73 T 12-10-2018 N288_16965 3310abdc7c4c77b853cff03ff8e6ce7e 224 Pfam PF00033 Cytochrome b/b6/petB 40 219 2.1E-48 T 12-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 N288_16965 3310abdc7c4c77b853cff03ff8e6ce7e 224 SUPERFAMILY SSF81342 6 224 2.09E-59 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 N288_16965 3310abdc7c4c77b853cff03ff8e6ce7e 224 PIRSF PIRSF000032 2 224 1.6E-100 T 12-10-2018 N288_16965 3310abdc7c4c77b853cff03ff8e6ce7e 224 Gene3D G3DSA:1.20.810.10 1 224 1.7E-86 T 12-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 N288_22950 f27f4c0a909909988063b0cb2be186e5 230 SUPERFAMILY SSF89562 26 186 6.67E-50 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily N288_22950 f27f4c0a909909988063b0cb2be186e5 230 Gene3D G3DSA:3.50.30.100 6 199 9.8E-60 T 12-10-2018 N288_22950 f27f4c0a909909988063b0cb2be186e5 230 Pfam PF03737 Aldolase/RraA 28 176 8.7E-47 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein N288_19465 a713083446708c2f63739da9489cc399 68 TIGRFAM TIGR03092 SASP_sspI: small, acid-soluble spore protein I 4 68 2.7E-33 T 12-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 N288_19465 a713083446708c2f63739da9489cc399 68 Pfam PF14098 Small, acid-soluble spore protein I 3 67 2.1E-31 T 12-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 N288_19465 a713083446708c2f63739da9489cc399 68 Hamap MF_00669 Small, acid-soluble spore protein I [sspI]. 1 68 22.077 T 12-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 N288_12790 d73e9c6050bf3aa5a71d08df0dcb3da8 78 Pfam PF01381 Helix-turn-helix 6 58 3.0E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_12790 d73e9c6050bf3aa5a71d08df0dcb3da8 78 SUPERFAMILY SSF47413 4 60 1.1E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_12790 d73e9c6050bf3aa5a71d08df0dcb3da8 78 SMART SM00530 5 60 1.5E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_12790 d73e9c6050bf3aa5a71d08df0dcb3da8 78 Gene3D G3DSA:1.10.260.40 3 71 4.6E-11 T 12-10-2018 N288_02405 cc33cfe919ce0048ffe719a0e67a53e8 149 SUPERFAMILY SSF46785 9 143 2.1E-34 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_02405 cc33cfe919ce0048ffe719a0e67a53e8 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 3.0E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_02405 cc33cfe919ce0048ffe719a0e67a53e8 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 3.0E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_02405 cc33cfe919ce0048ffe719a0e67a53e8 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 3.0E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_02405 cc33cfe919ce0048ffe719a0e67a53e8 149 Gene3D G3DSA:1.10.10.10 1 147 5.1E-39 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_02405 cc33cfe919ce0048ffe719a0e67a53e8 149 SMART SM00347 31 129 1.4E-23 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_02405 cc33cfe919ce0048ffe719a0e67a53e8 149 Pfam PF01047 MarR family 39 96 7.6E-19 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 N288_10990 498d4f1fc337fd3605d54720ea713cc0 148 Gene3D G3DSA:3.90.1720.10 29 148 2.2E-45 T 12-10-2018 N288_10990 498d4f1fc337fd3605d54720ea713cc0 148 SUPERFAMILY SSF54001 30 148 2.78E-44 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily N288_10990 498d4f1fc337fd3605d54720ea713cc0 148 Pfam PF00877 NlpC/P60 family 43 146 2.2E-34 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain N288_03610 13d3226fbcada7394fa8ede25eef501d 405 Pfam PF07690 Major Facilitator Superfamily 19 348 5.1E-47 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_03610 13d3226fbcada7394fa8ede25eef501d 405 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 85 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_03610 13d3226fbcada7394fa8ede25eef501d 405 Gene3D G3DSA:1.20.1250.20 9 389 1.6E-59 T 12-10-2018 N288_03610 13d3226fbcada7394fa8ede25eef501d 405 SUPERFAMILY SSF103473 12 389 3.4E-63 T 12-10-2018 IPR036259 MFS transporter superfamily N288_04475 e1725c3f78bee0bbef8e09eee7e7677e 89 SMART SM00894 33 88 1.5E-4 T 12-10-2018 IPR008613 Excalibur calcium-binding domain N288_04475 e1725c3f78bee0bbef8e09eee7e7677e 89 Pfam PF05901 Excalibur calcium-binding domain 34 88 6.3E-14 T 12-10-2018 IPR008613 Excalibur calcium-binding domain N288_01505 e2e4b125c4f44ec71c348ad9c34bc1ad 338 Gene3D G3DSA:2.50.20.10 23 215 8.3E-14 T 12-10-2018 N288_01505 e2e4b125c4f44ec71c348ad9c34bc1ad 338 SUPERFAMILY SSF89392 28 203 7.45E-20 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX N288_11485 8fb9dc42da9bb36b483aa790f7efb06d 322 SUPERFAMILY SSF51412 3 307 6.56E-63 T 12-10-2018 N288_11485 8fb9dc42da9bb36b483aa790f7efb06d 322 Gene3D G3DSA:3.20.20.70 1 315 4.4E-95 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_11485 8fb9dc42da9bb36b483aa790f7efb06d 322 Pfam PF03060 Nitronate monooxygenase 3 300 1.6E-56 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 N288_00950 27a08914b399f0b21c10c56238704c2b 208 PIRSF PIRSF029886 1 197 1.8E-79 T 12-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 N288_00950 27a08914b399f0b21c10c56238704c2b 208 Pfam PF14089 KinB-signalling pathway activation in sporulation 17 193 4.4E-80 T 12-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 N288_00950 27a08914b399f0b21c10c56238704c2b 208 SMART SM01251 17 194 1.2E-111 T 12-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 N288_11380 ce861599209bef4951acd1c77cb3b0c8 373 Gene3D G3DSA:3.40.640.10 1 371 6.2E-97 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_11380 ce861599209bef4951acd1c77cb3b0c8 373 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 367 2.1E-61 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase N288_11380 ce861599209bef4951acd1c77cb3b0c8 373 SUPERFAMILY SSF53383 4 369 2.21E-60 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_11380 ce861599209bef4951acd1c77cb3b0c8 373 PIRSF PIRSF000390 1 371 3.2E-69 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase N288_23395 03b3020749550a02c8808f8d9181acfd 514 Pfam PF03023 MviN-like protein 34 475 9.8E-64 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ N288_23395 03b3020749550a02c8808f8d9181acfd 514 PRINTS PR01806 Virulence factor MviN signature 259 285 1.2E-6 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ N288_23395 03b3020749550a02c8808f8d9181acfd 514 PRINTS PR01806 Virulence factor MviN signature 135 159 1.2E-6 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ N288_23395 03b3020749550a02c8808f8d9181acfd 514 PRINTS PR01806 Virulence factor MviN signature 407 424 1.2E-6 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ N288_23395 03b3020749550a02c8808f8d9181acfd 514 PRINTS PR01806 Virulence factor MviN signature 39 58 1.2E-6 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ N288_24120 ac35924a30b318a64960acdc275135b1 244 Pfam PF12730 ABC-2 family transporter protein 4 180 1.4E-32 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 N288_19550 691477e77c656a5a458df650e9eb167f 184 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 1 169 4.9E-54 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 N288_19550 691477e77c656a5a458df650e9eb167f 184 Gene3D G3DSA:3.40.50.300 1 179 4.7E-64 T 12-10-2018 N288_19550 691477e77c656a5a458df650e9eb167f 184 Pfam PF01121 Dephospho-CoA kinase 2 163 5.7E-51 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 N288_19550 691477e77c656a5a458df650e9eb167f 184 SUPERFAMILY SSF52540 1 174 8.37E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_19550 691477e77c656a5a458df650e9eb167f 184 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 179 19.725 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 N288_13965 0ca10a41292397ab89569d4039a926a8 213 SMART SM00835 21 158 1.9E-13 T 12-10-2018 IPR006045 Cupin 1 GO:0045735 N288_13965 0ca10a41292397ab89569d4039a926a8 213 Gene3D G3DSA:2.60.120.10 29 190 1.7E-26 T 12-10-2018 IPR014710 RmlC-like jelly roll fold N288_13965 0ca10a41292397ab89569d4039a926a8 213 SUPERFAMILY SSF51182 26 166 5.57E-28 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily N288_13965 0ca10a41292397ab89569d4039a926a8 213 Pfam PF00190 Cupin 45 156 1.6E-11 T 12-10-2018 IPR006045 Cupin 1 GO:0045735 N288_18235 e5b4a723f0fbb0c86a8d6a79ec76e647 160 Pfam PF04306 Protein of unknown function (DUF456) 21 157 6.5E-39 T 12-10-2018 IPR007403 Protein of unknown function DUF456 N288_23790 3a9b301f869ac3e9415c867bc9c68de3 210 Pfam PF00293 NUDIX domain 27 138 6.5E-10 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_23790 3a9b301f869ac3e9415c867bc9c68de3 210 Gene3D G3DSA:3.90.79.10 4 203 2.8E-43 T 12-10-2018 N288_23790 3a9b301f869ac3e9415c867bc9c68de3 210 SUPERFAMILY SSF55811 28 196 1.6E-26 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_10215 2a8a67029ee2e208f6530153efdfecdc 134 Gene3D G3DSA:3.40.50.450 2 125 1.9E-8 T 12-10-2018 N288_10215 2a8a67029ee2e208f6530153efdfecdc 134 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 12 90 1.0E-8 T 12-10-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase Reactome: R-HSA-74259 N288_10215 2a8a67029ee2e208f6530153efdfecdc 134 SUPERFAMILY SSF52309 1 92 5.8E-9 T 12-10-2018 N288_12560 4afac875b5198c5cb0044f8f3b111eca 289 Pfam PF02274 Amidinotransferase 79 282 5.1E-42 T 12-10-2018 N288_12560 4afac875b5198c5cb0044f8f3b111eca 289 SUPERFAMILY SSF55909 9 283 1.96E-75 T 12-10-2018 N288_12560 4afac875b5198c5cb0044f8f3b111eca 289 Gene3D G3DSA:3.75.10.10 6 284 3.0E-78 T 12-10-2018 N288_16220 32e6583bc28061c31bc4f0e77ce2b43a 454 Gene3D G3DSA:3.40.640.10 51 328 9.5E-152 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_16220 32e6583bc28061c31bc4f0e77ce2b43a 454 Pfam PF00202 Aminotransferase class-III 18 437 1.3E-110 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_16220 32e6583bc28061c31bc4f0e77ce2b43a 454 SUPERFAMILY SSF53383 12 439 1.87E-126 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_16220 32e6583bc28061c31bc4f0e77ce2b43a 454 PIRSF PIRSF000521 11 403 5.4E-39 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_16220 32e6583bc28061c31bc4f0e77ce2b43a 454 Gene3D G3DSA:3.90.1150.10 18 437 9.5E-152 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 N288_16220 32e6583bc28061c31bc4f0e77ce2b43a 454 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 N288_01110 fed72dbbaf90c08d57c0f313c52f01ee 92 SUPERFAMILY SSF46689 1 89 1.38E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_08065 f5323ecbfc3d9c11a9a54c36840001d8 332 Pfam PF11553 Protein of unknown function (DUF3231) 169 330 6.6E-53 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_08065 f5323ecbfc3d9c11a9a54c36840001d8 332 Pfam PF11553 Protein of unknown function (DUF3231) 2 158 3.6E-27 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_08065 f5323ecbfc3d9c11a9a54c36840001d8 332 Gene3D G3DSA:1.20.1260.10 2 146 2.3E-6 T 12-10-2018 IPR012347 Ferritin-like N288_23715 a8deedde2e01cfb3d0b26af210f8edf4 177 Hamap MF_01398 ATP synthase subunit b [atpF]. 18 155 13.623 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 N288_23715 a8deedde2e01cfb3d0b26af210f8edf4 177 SUPERFAMILY SSF81573 80 138 5.75E-10 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily N288_23715 a8deedde2e01cfb3d0b26af210f8edf4 177 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 27 172 1.6E-43 T 12-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 N288_23715 a8deedde2e01cfb3d0b26af210f8edf4 177 Pfam PF00430 ATP synthase B/B' CF(0) 24 154 3.1E-38 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 N288_00925 b4f37a7d8e9cd6e41d0aac85543f44df 147 Pfam PF10730 Protein of unknown function (DUF2521) 2 147 8.4E-62 T 12-10-2018 IPR019667 Uncharacterised protein family YbaK N288_11640 38d5a1c5928037a9700a16c076952b5f 316 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 241 8.9E-26 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 N288_11640 38d5a1c5928037a9700a16c076952b5f 316 SUPERFAMILY SSF51735 1 310 5.19E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_11640 38d5a1c5928037a9700a16c076952b5f 316 Gene3D G3DSA:3.40.50.720 1 311 5.5E-106 T 12-10-2018 N288_05085 7e1d2834c2f807ab8fe8acf4ceae7cd5 140 SMART SM00387 34 134 1.9E-5 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_05085 7e1d2834c2f807ab8fe8acf4ceae7cd5 140 Pfam PF13581 Histidine kinase-like ATPase domain 18 130 6.1E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_05085 7e1d2834c2f807ab8fe8acf4ceae7cd5 140 Gene3D G3DSA:3.30.565.10 4 134 9.5E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_05085 7e1d2834c2f807ab8fe8acf4ceae7cd5 140 SUPERFAMILY SSF55874 24 128 9.72E-14 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_07835 071f013c34fd5baf45fc73f87a57fd67 138 Pfam PF13279 Thioesterase-like superfamily 8 124 5.6E-19 T 12-10-2018 N288_07835 071f013c34fd5baf45fc73f87a57fd67 138 SUPERFAMILY SSF54637 3 130 2.16E-36 T 12-10-2018 IPR029069 HotDog domain superfamily N288_07835 071f013c34fd5baf45fc73f87a57fd67 138 Gene3D G3DSA:3.10.129.10 1 131 7.7E-38 T 12-10-2018 N288_16785 068744e3c4c28780418ac125d1a011e0 159 Pfam PF00011 Hsp20/alpha crystallin family 59 151 1.3E-16 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain N288_16785 068744e3c4c28780418ac125d1a011e0 159 SUPERFAMILY SSF49764 43 152 7.32E-24 T 12-10-2018 IPR008978 HSP20-like chaperone N288_16785 068744e3c4c28780418ac125d1a011e0 159 Gene3D G3DSA:2.60.40.790 9 156 5.3E-28 T 12-10-2018 IPR008978 HSP20-like chaperone N288_08145 2a852649896f69352e921e9a07fa21ad 215 Gene3D G3DSA:3.40.50.280 86 207 3.1E-28 T 12-10-2018 N288_08145 2a852649896f69352e921e9a07fa21ad 215 SUPERFAMILY SSF52242 88 183 7.06E-21 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 N288_08145 2a852649896f69352e921e9a07fa21ad 215 Pfam PF02310 B12 binding domain 91 176 1.8E-16 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 N288_08145 2a852649896f69352e921e9a07fa21ad 215 Gene3D G3DSA:1.10.1240.10 4 78 7.9E-8 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 N288_16000 10756795e41b02f61871bb5b6216725a 199 Gene3D G3DSA:3.40.630.30 10 179 2.2E-23 T 12-10-2018 N288_16000 10756795e41b02f61871bb5b6216725a 199 Pfam PF13302 Acetyltransferase (GNAT) domain 19 144 2.1E-14 T 12-10-2018 IPR000182 GNAT domain N288_16000 10756795e41b02f61871bb5b6216725a 199 SUPERFAMILY SSF55729 14 147 7.54E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_16285 81f18b5d401fcdbb5b406cf830f48489 194 Pfam PF09911 Uncharacterized protein conserved in bacteria (DUF2140) 5 191 4.3E-63 T 12-10-2018 IPR018672 Protein of unknown function DUF2140 N288_03535 f5fb816b7e93b254b5fcb67f9d576060 426 Pfam PF07690 Major Facilitator Superfamily 270 416 7.4E-11 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_03535 f5fb816b7e93b254b5fcb67f9d576060 426 Pfam PF07690 Major Facilitator Superfamily 19 255 1.5E-35 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_03535 f5fb816b7e93b254b5fcb67f9d576060 426 Gene3D G3DSA:1.20.1250.20 12 195 4.9E-30 T 12-10-2018 N288_03535 f5fb816b7e93b254b5fcb67f9d576060 426 Gene3D G3DSA:1.20.1250.20 255 425 2.7E-16 T 12-10-2018 N288_03535 f5fb816b7e93b254b5fcb67f9d576060 426 ProSitePatterns PS00216 Sugar transport proteins signature 1. 62 79 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 N288_03535 f5fb816b7e93b254b5fcb67f9d576060 426 SUPERFAMILY SSF103473 6 417 5.75E-58 T 12-10-2018 IPR036259 MFS transporter superfamily N288_21390 2cae90876d963a22f1a9d8dbfd364522 121 SUPERFAMILY SSF46785 8 110 3.87E-34 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_21390 2cae90876d963a22f1a9d8dbfd364522 121 Gene3D G3DSA:1.10.10.10 3 119 3.5E-39 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_21390 2cae90876d963a22f1a9d8dbfd364522 121 Pfam PF01638 HxlR-like helix-turn-helix 19 108 1.2E-39 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type N288_04910 0bf81354ecf7e0138e67040aa0e73f56 352 Gene3D G3DSA:3.20.20.100 25 349 1.7E-85 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily N288_04910 0bf81354ecf7e0138e67040aa0e73f56 352 Pfam PF00248 Aldo/keto reductase family 40 338 2.6E-63 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain N288_04910 0bf81354ecf7e0138e67040aa0e73f56 352 PRINTS PR00069 Aldo-keto reductase signature 67 91 2.0E-6 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_04910 0bf81354ecf7e0138e67040aa0e73f56 352 PRINTS PR00069 Aldo-keto reductase signature 130 148 2.0E-6 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_04910 0bf81354ecf7e0138e67040aa0e73f56 352 PRINTS PR00069 Aldo-keto reductase signature 162 179 2.0E-6 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_04910 0bf81354ecf7e0138e67040aa0e73f56 352 SUPERFAMILY SSF51430 26 343 3.8E-81 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily N288_17375 968b8af74fc1cbe1323c3acb2505973b 33 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 9 32 1.2E-13 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like N288_17375 968b8af74fc1cbe1323c3acb2505973b 33 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 7 32 7.4E-16 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like N288_03055 c53cbf35c244095e430386a1fefec186 401 Pfam PF04235 Protein of unknown function (DUF418) 226 379 2.4E-38 T 12-10-2018 IPR007349 Domain of unknown function DUF418 N288_10920 1ddf2f3067fdef5529881ee23877242f 235 TIGRFAM TIGR02206 intg_mem_TP0381: conserved hypothetical integral membrane protein TIGR02206 13 230 1.3E-52 T 12-10-2018 IPR011737 Conserved hypothetical protein CHP02206, TP0381 N288_10920 1ddf2f3067fdef5529881ee23877242f 235 Pfam PF09529 Integral membrane protein (intg_mem_TP0381) 17 225 1.7E-49 T 12-10-2018 IPR011737 Conserved hypothetical protein CHP02206, TP0381 N288_08435 1e5870d0f6c4846f729f9fdaf13d9f55 335 SUPERFAMILY SSF56112 24 302 9.91E-49 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_08435 1e5870d0f6c4846f729f9fdaf13d9f55 335 Gene3D G3DSA:3.90.1200.10 122 314 1.2E-18 T 12-10-2018 N288_08435 1e5870d0f6c4846f729f9fdaf13d9f55 335 Pfam PF01636 Phosphotransferase enzyme family 34 277 2.0E-25 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase N288_08615 ae4dd5df43ef691a9a859434567c95d2 203 Pfam PF10400 Virulence activator alpha C-term 92 171 2.7E-5 T 12-10-2018 IPR018309 Transcription regulator PadR, C-terminal N288_08615 ae4dd5df43ef691a9a859434567c95d2 203 Pfam PF03551 Transcriptional regulator PadR-like family 7 81 3.1E-17 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal N288_08615 ae4dd5df43ef691a9a859434567c95d2 203 Gene3D G3DSA:1.10.10.10 1 88 6.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_08615 ae4dd5df43ef691a9a859434567c95d2 203 SUPERFAMILY SSF46785 2 172 7.64E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_01785 5b51f596f0f5c0ece63e85e563430680 427 PIRSF PIRSF001362 1 426 3.7E-242 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 N288_01785 5b51f596f0f5c0ece63e85e563430680 427 ProSitePatterns PS00161 Isocitrate lyase signature. 184 189 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 N288_01785 5b51f596f0f5c0ece63e85e563430680 427 Gene3D G3DSA:3.20.20.60 3 406 4.1E-175 T 12-10-2018 N288_01785 5b51f596f0f5c0ece63e85e563430680 427 Pfam PF00463 Isocitrate lyase family 11 250 9.7E-61 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 N288_01785 5b51f596f0f5c0ece63e85e563430680 427 SUPERFAMILY SSF51621 4 423 5.38E-162 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 N288_01785 5b51f596f0f5c0ece63e85e563430680 427 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 247 423 7.5E-83 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 N288_01785 5b51f596f0f5c0ece63e85e563430680 427 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 7 248 5.7E-109 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 N288_22880 d275ff62e834e5e8622841458ce51326 250 SUPERFAMILY SSF53697 2 148 2.83E-17 T 12-10-2018 N288_22880 d275ff62e834e5e8622841458ce51326 250 Gene3D G3DSA:3.40.50.10490 2 246 4.4E-77 T 12-10-2018 N288_22880 d275ff62e834e5e8622841458ce51326 250 Pfam PF13580 SIS domain 6 142 3.2E-38 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 N288_15615 19ce34fdf910b058ce128782a1c92573 262 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 47 63 - T 12-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 N288_15615 19ce34fdf910b058ce128782a1c92573 262 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 254 34.015 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 N288_15615 19ce34fdf910b058ce128782a1c92573 262 Gene3D G3DSA:3.20.20.70 1 258 6.6E-93 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_15615 19ce34fdf910b058ce128782a1c92573 262 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 248 2.9E-85 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 N288_15615 19ce34fdf910b058ce128782a1c92573 262 SUPERFAMILY SSF51366 1 250 1.6E-79 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 N288_22905 36c5693f97cf54fe3d8d8011838f3f4f 503 Gene3D G3DSA:1.20.1730.10 7 501 1.8E-84 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily N288_22905 36c5693f97cf54fe3d8d8011838f3f4f 503 Pfam PF00474 Sodium:solute symporter family 33 433 1.8E-35 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 N288_08490 1a45c7d9013471a88bdd33d23030b316 62 Pfam PF09953 Uncharacterized protein conserved in bacteria (DUF2187) 2 57 1.7E-30 T 12-10-2018 IPR018690 Protein of unknown function DUF2187 N288_00155 7bd28f60fa4bf60a3050b2738581c54d 71 Pfam PF10704 Protein of unknown function (DUF2508) 1 69 2.0E-27 T 12-10-2018 IPR019644 Protein of unknown function DUF2508 N288_24415 abf952527499021d109ca7d2526935fe 115 Pfam PF03551 Transcriptional regulator PadR-like family 19 89 8.5E-19 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal N288_24415 abf952527499021d109ca7d2526935fe 115 Gene3D G3DSA:1.10.10.10 1 114 8.1E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_24415 abf952527499021d109ca7d2526935fe 115 SUPERFAMILY SSF46785 10 106 6.17E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_25085 bfc91becebb7fbc56cf13385bcf0692a 476 Gene3D G3DSA:1.20.200.10 143 410 1.3E-116 T 12-10-2018 N288_25085 bfc91becebb7fbc56cf13385bcf0692a 476 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 N288_25085 bfc91becebb7fbc56cf13385bcf0692a 476 Gene3D G3DSA:1.10.275.10 9 142 3.4E-57 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal N288_25085 bfc91becebb7fbc56cf13385bcf0692a 476 SUPERFAMILY SSF48557 8 465 1.88E-150 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 N288_25085 bfc91becebb7fbc56cf13385bcf0692a 476 Pfam PF00206 Lyase 17 345 3.1E-110 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal N288_25085 bfc91becebb7fbc56cf13385bcf0692a 476 Gene3D G3DSA:1.10.40.30 411 462 5.8E-21 T 12-10-2018 N288_25085 bfc91becebb7fbc56cf13385bcf0692a 476 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 2.7E-32 T 12-10-2018 IPR000362 Fumarate lyase family N288_25085 bfc91becebb7fbc56cf13385bcf0692a 476 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 2.7E-32 T 12-10-2018 IPR000362 Fumarate lyase family N288_25085 bfc91becebb7fbc56cf13385bcf0692a 476 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 2.7E-32 T 12-10-2018 IPR000362 Fumarate lyase family N288_25085 bfc91becebb7fbc56cf13385bcf0692a 476 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 2.7E-32 T 12-10-2018 IPR000362 Fumarate lyase family N288_25085 bfc91becebb7fbc56cf13385bcf0692a 476 Pfam PF10415 Fumarase C C-terminus 411 464 4.6E-19 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 N288_25085 bfc91becebb7fbc56cf13385bcf0692a 476 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 1.6E-7 T 12-10-2018 N288_25085 bfc91becebb7fbc56cf13385bcf0692a 476 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 1.6E-7 T 12-10-2018 N288_25085 bfc91becebb7fbc56cf13385bcf0692a 476 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 1.6E-7 T 12-10-2018 N288_25085 bfc91becebb7fbc56cf13385bcf0692a 476 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 9 470 5.0E-237 T 12-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 N288_16010 0eaf5195a842f00b090cf731c6b385f3 51 Pfam PF11121 Protein of unknown function (DUF2639) 3 41 3.0E-22 T 12-10-2018 IPR022580 Protein of unknown function DUF2639 N288_16010 0eaf5195a842f00b090cf731c6b385f3 51 ProDom PD049467 YFLJ 5 40 0.006 T 12-10-2018 IPR022580 Protein of unknown function DUF2639 N288_11710 99627af77710a66e8f583355b20f4769 47 Hamap MF_01505 Small, acid-soluble spore protein N [sspN]. 1 47 17.791 T 12-10-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 N288_11710 99627af77710a66e8f583355b20f4769 47 Pfam PF08177 Small acid-soluble spore protein N family 1 46 3.5E-26 T 12-10-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 N288_05310 02738c209e7d48bfce616fd9f286052a 594 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 5 546 1.7E-106 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 N288_05310 02738c209e7d48bfce616fd9f286052a 594 Pfam PF02652 L-lactate permease 7 546 4.7E-112 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 N288_11110 6abc54ffb0f1cf88c6d5a7d643478612 296 Pfam PF01636 Phosphotransferase enzyme family 66 250 2.3E-13 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase N288_11110 6abc54ffb0f1cf88c6d5a7d643478612 296 Gene3D G3DSA:3.90.1200.10 102 277 2.1E-14 T 12-10-2018 N288_11110 6abc54ffb0f1cf88c6d5a7d643478612 296 SUPERFAMILY SSF56112 18 238 1.99E-19 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_25255 94ec4250adf3589a83c72907b7218afc 302 SUPERFAMILY SSF53850 87 293 2.95E-45 T 12-10-2018 N288_25255 94ec4250adf3589a83c72907b7218afc 302 Gene3D G3DSA:3.40.190.10 164 265 6.9E-40 T 12-10-2018 N288_25255 94ec4250adf3589a83c72907b7218afc 302 Pfam PF03466 LysR substrate binding domain 87 293 1.3E-46 T 12-10-2018 IPR005119 LysR, substrate-binding N288_25255 94ec4250adf3589a83c72907b7218afc 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.0E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 N288_25255 94ec4250adf3589a83c72907b7218afc 302 SUPERFAMILY SSF46785 1 85 3.6E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_25255 94ec4250adf3589a83c72907b7218afc 302 Gene3D G3DSA:3.40.190.10 90 287 6.9E-40 T 12-10-2018 N288_25255 94ec4250adf3589a83c72907b7218afc 302 Gene3D G3DSA:1.10.10.10 1 89 4.9E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_15895 3dab68ed9531bc3f97eb5dac5e334c02 217 Gene3D G3DSA:1.20.144.10 12 124 9.1E-10 T 12-10-2018 N288_15895 3dab68ed9531bc3f97eb5dac5e334c02 217 Gene3D G3DSA:1.20.144.10 125 216 2.6E-23 T 12-10-2018 N288_15895 3dab68ed9531bc3f97eb5dac5e334c02 217 SMART SM00014 92 205 2.1E-23 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase N288_15895 3dab68ed9531bc3f97eb5dac5e334c02 217 SUPERFAMILY SSF48317 13 213 6.67E-40 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily N288_15895 3dab68ed9531bc3f97eb5dac5e334c02 217 Pfam PF01569 PAP2 superfamily 102 207 1.3E-22 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase N288_09750 16e5f1df52987fcbe030dee8372dfd3e 142 Pfam PF03748 Flagellar basal body-associated protein FliL 50 142 2.5E-17 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 N288_24420 a69ed66c334f472578a8e48abdafd999 302 SUPERFAMILY SSF51735 1 139 6.15E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_24420 a69ed66c334f472578a8e48abdafd999 302 Gene3D G3DSA:3.30.360.10 119 301 7.6E-59 T 12-10-2018 N288_24420 a69ed66c334f472578a8e48abdafd999 302 Gene3D G3DSA:3.40.50.720 1 118 1.6E-28 T 12-10-2018 N288_24420 a69ed66c334f472578a8e48abdafd999 302 SUPERFAMILY SSF55347 121 258 5.89E-40 T 12-10-2018 N288_24420 a69ed66c334f472578a8e48abdafd999 302 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 6.1E-18 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 N288_01155 62ab1f546264367dbacfb465c4d60e9a 185 Gene3D G3DSA:1.10.443.10 7 170 2.1E-24 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 N288_01155 62ab1f546264367dbacfb465c4d60e9a 185 Pfam PF00589 Phage integrase family 15 169 2.5E-19 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 N288_01155 62ab1f546264367dbacfb465c4d60e9a 185 SUPERFAMILY SSF56349 16 173 4.71E-29 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 N288_07175 3b794b6c615aac5b68ed70974ede2ccc 305 Gene3D G3DSA:3.40.50.1820 8 301 3.5E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_07175 3b794b6c615aac5b68ed70974ede2ccc 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 110 1.3E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_07175 3b794b6c615aac5b68ed70974ede2ccc 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 111 124 1.3E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_07175 3b794b6c615aac5b68ed70974ede2ccc 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 53 68 1.3E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_07175 3b794b6c615aac5b68ed70974ede2ccc 305 SUPERFAMILY SSF53474 14 299 6.31E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_07175 3b794b6c615aac5b68ed70974ede2ccc 305 Pfam PF12146 Serine aminopeptidase, S33 29 284 4.9E-18 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 N288_05595 3691d32ced2f4ba46e5d1775e443d0f9 169 Pfam PF07681 DoxX 13 109 1.2E-6 T 12-10-2018 IPR032808 DoxX family N288_21005 f1114a25765d69e2639b62f25d4ea04c 200 SUPERFAMILY SSF52540 17 193 4.68E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_21005 f1114a25765d69e2639b62f25d4ea04c 200 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 20 156 6.6E-7 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 N288_21005 f1114a25765d69e2639b62f25d4ea04c 200 Gene3D G3DSA:3.40.50.300 2 195 4.0E-51 T 12-10-2018 N288_00045 70983d352f6f5a1dec33365370d7d67b 362 Pfam PF13487 HD domain 198 247 2.1E-11 T 12-10-2018 N288_00045 70983d352f6f5a1dec33365370d7d67b 362 Gene3D G3DSA:1.10.3210.10 1 307 3.1E-61 T 12-10-2018 N288_00045 70983d352f6f5a1dec33365370d7d67b 362 SUPERFAMILY SSF109604 139 291 1.6E-24 T 12-10-2018 N288_00045 70983d352f6f5a1dec33365370d7d67b 362 SMART SM00471 142 277 9.0E-7 T 12-10-2018 IPR003607 HD/PDEase domain N288_15185 402bbf653ef8caa2d1fa1fd8e1461907 166 SUPERFAMILY SSF55729 1 165 1.53E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_15185 402bbf653ef8caa2d1fa1fd8e1461907 166 Pfam PF00583 Acetyltransferase (GNAT) family 46 139 6.4E-16 T 12-10-2018 IPR000182 GNAT domain N288_15185 402bbf653ef8caa2d1fa1fd8e1461907 166 Gene3D G3DSA:3.40.630.30 1 166 3.0E-41 T 12-10-2018 N288_23015 ceb56def0e3d7a1c07173f0a8d25dd99 451 SUPERFAMILY SSF51905 17 421 2.53E-17 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_23015 ceb56def0e3d7a1c07173f0a8d25dd99 451 Gene3D G3DSA:3.50.50.60 15 196 8.8E-15 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily N288_23015 ceb56def0e3d7a1c07173f0a8d25dd99 451 Pfam PF12831 FAD dependent oxidoreductase 18 445 1.7E-97 T 12-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal N288_10845 5eaaa1748d6ef3a8e7aa0f8886696e49 581 Pfam PF02554 Carbon starvation protein CstA 1 380 5.4E-130 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 N288_10845 5eaaa1748d6ef3a8e7aa0f8886696e49 581 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 403 525 1.7E-33 T 12-10-2018 IPR025299 CstA, C-terminal domain N288_22355 d7b979b304210694de68d366753dc349 558 Pfam PF16147 Domain of unknown function (DUF4855) 256 550 3.5E-75 T 12-10-2018 IPR032329 Protein of unknown function DUF4855 N288_22355 d7b979b304210694de68d366753dc349 558 Pfam PF00395 S-layer homology domain 146 189 6.8E-11 T 12-10-2018 IPR001119 S-layer homology domain N288_22355 d7b979b304210694de68d366753dc349 558 Pfam PF00395 S-layer homology domain 29 70 1.8E-6 T 12-10-2018 IPR001119 S-layer homology domain N288_04710 c4d99f4ec8be7c1653200b7472683c65 402 SMART SM00283 96 357 3.5E-11 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_04710 c4d99f4ec8be7c1653200b7472683c65 402 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 189 323 8.0E-23 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 N288_04710 c4d99f4ec8be7c1653200b7472683c65 402 SUPERFAMILY SSF58104 89 372 4.05E-41 T 12-10-2018 N288_04710 c4d99f4ec8be7c1653200b7472683c65 402 Gene3D G3DSA:1.10.287.950 75 377 9.3E-42 T 12-10-2018 N288_08870 87fde3e9a028648df67093bb0a5568c9 266 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 12-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 N288_08870 87fde3e9a028648df67093bb0a5568c9 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 6.8E-37 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 N288_08870 87fde3e9a028648df67093bb0a5568c9 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 6.8E-37 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 N288_08870 87fde3e9a028648df67093bb0a5568c9 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 6.8E-37 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 N288_08870 87fde3e9a028648df67093bb0a5568c9 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 6.8E-37 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 N288_08870 87fde3e9a028648df67093bb0a5568c9 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 6.8E-37 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 N288_08870 87fde3e9a028648df67093bb0a5568c9 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 6.8E-37 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 N288_08870 87fde3e9a028648df67093bb0a5568c9 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 12-10-2018 IPR020583 Inositol monophosphatase, metal-binding site N288_08870 87fde3e9a028648df67093bb0a5568c9 266 Gene3D G3DSA:3.40.190.80 145 264 2.1E-31 T 12-10-2018 N288_08870 87fde3e9a028648df67093bb0a5568c9 266 Gene3D G3DSA:3.30.540.10 1 143 8.2E-44 T 12-10-2018 N288_08870 87fde3e9a028648df67093bb0a5568c9 266 SUPERFAMILY SSF56655 3 258 1.02E-72 T 12-10-2018 N288_08870 87fde3e9a028648df67093bb0a5568c9 266 Pfam PF00459 Inositol monophosphatase family 5 259 5.2E-64 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 N288_23775 baba610bd01391640e1a68005362cb59 187 PIRSF PIRSF007510 1 181 2.4E-78 T 12-10-2018 IPR006340 Protein of unknown function DUF436 N288_23775 baba610bd01391640e1a68005362cb59 187 Hamap MF_00800 UPF0340 protein . 1 187 89.875 T 12-10-2018 IPR006340 Protein of unknown function DUF436 N288_23775 baba610bd01391640e1a68005362cb59 187 Pfam PF04260 Protein of unknown function (DUF436) 9 178 3.3E-76 T 12-10-2018 IPR006340 Protein of unknown function DUF436 N288_23775 baba610bd01391640e1a68005362cb59 187 Gene3D G3DSA:3.40.50.10360 2 186 1.5E-78 T 12-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like N288_23775 baba610bd01391640e1a68005362cb59 187 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 13 178 1.0E-62 T 12-10-2018 IPR006340 Protein of unknown function DUF436 N288_23775 baba610bd01391640e1a68005362cb59 187 SUPERFAMILY SSF110710 3 182 2.12E-75 T 12-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like N288_23775 baba610bd01391640e1a68005362cb59 187 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 8 178 2.8E-73 T 12-10-2018 IPR006340 Protein of unknown function DUF436 N288_19900 a7ff6a9d1941ad23957cdb33f76f89a5 390 SUPERFAMILY SSF52768 6 374 1.77E-105 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily N288_19900 a7ff6a9d1941ad23957cdb33f76f89a5 390 Gene3D G3DSA:3.40.800.20 3 345 6.0E-103 T 12-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 N288_19900 a7ff6a9d1941ad23957cdb33f76f89a5 390 PRINTS PR01270 Histone deacetylase superfamily signature 130 153 1.8E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 N288_19900 a7ff6a9d1941ad23957cdb33f76f89a5 390 PRINTS PR01270 Histone deacetylase superfamily signature 163 178 1.8E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 N288_19900 a7ff6a9d1941ad23957cdb33f76f89a5 390 PRINTS PR01270 Histone deacetylase superfamily signature 249 259 1.8E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 N288_19900 a7ff6a9d1941ad23957cdb33f76f89a5 390 PRINTS PR01272 Acetoin utilisation ACUC protein signature 16 36 7.3E-47 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 N288_19900 a7ff6a9d1941ad23957cdb33f76f89a5 390 PRINTS PR01272 Acetoin utilisation ACUC protein signature 274 290 7.3E-47 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 N288_19900 a7ff6a9d1941ad23957cdb33f76f89a5 390 PRINTS PR01272 Acetoin utilisation ACUC protein signature 334 350 7.3E-47 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 N288_19900 a7ff6a9d1941ad23957cdb33f76f89a5 390 PRINTS PR01272 Acetoin utilisation ACUC protein signature 351 370 7.3E-47 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 N288_19900 a7ff6a9d1941ad23957cdb33f76f89a5 390 PRINTS PR01272 Acetoin utilisation ACUC protein signature 107 120 7.3E-47 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 N288_19900 a7ff6a9d1941ad23957cdb33f76f89a5 390 PRINTS PR01272 Acetoin utilisation ACUC protein signature 313 332 7.3E-47 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 N288_19900 a7ff6a9d1941ad23957cdb33f76f89a5 390 PRINTS PR01272 Acetoin utilisation ACUC protein signature 86 100 7.3E-47 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 N288_19900 a7ff6a9d1941ad23957cdb33f76f89a5 390 Pfam PF00850 Histone deacetylase domain 22 316 3.2E-75 T 12-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 N288_11200 dcc70dccddfc56e548198561457c37fe 235 Gene3D G3DSA:3.40.640.10 43 221 8.2E-42 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 N288_11200 dcc70dccddfc56e548198561457c37fe 235 Pfam PF00266 Aminotransferase class-V 83 215 6.8E-8 T 12-10-2018 IPR000192 Aminotransferase class V domain N288_11200 dcc70dccddfc56e548198561457c37fe 235 SUPERFAMILY SSF53383 5 216 5.02E-37 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase N288_19620 8dc11609b6ac4aeaece92dbba15e0f1b 375 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 11 359 2.4E-107 T 12-10-2018 IPR014227 Putative transport protein YtvI-like N288_19620 8dc11609b6ac4aeaece92dbba15e0f1b 375 Pfam PF01594 AI-2E family transporter 15 356 4.8E-59 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like N288_24610 b6966d16499acc112c67d74263f42605 123 Pfam PF07875 Coat F domain 19 79 1.8E-16 T 12-10-2018 IPR012851 Spore coat protein CotF-like N288_04505 4de8ba07fa66704fe60a4bcb1bd463d3 298 Pfam PF00892 EamA-like transporter family 156 295 3.9E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_04505 4de8ba07fa66704fe60a4bcb1bd463d3 298 Pfam PF00892 EamA-like transporter family 1 137 6.8E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_04505 4de8ba07fa66704fe60a4bcb1bd463d3 298 SUPERFAMILY SSF103481 194 297 4.18E-7 T 12-10-2018 N288_04505 4de8ba07fa66704fe60a4bcb1bd463d3 298 SUPERFAMILY SSF103481 62 141 1.57E-10 T 12-10-2018 N288_13630 45662db4a68539ad9aa037a8e334dc58 66 SUPERFAMILY SSF47406 6 33 8.5E-6 T 12-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 N288_13630 45662db4a68539ad9aa037a8e334dc58 66 Pfam PF08671 Anti-repressor SinI 7 33 2.2E-11 T 12-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 N288_09035 ced09c267d6362b404a5f04c5a489647 146 Gene3D G3DSA:1.20.1500.10 3 126 7.1E-28 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily N288_09035 ced09c267d6362b404a5f04c5a489647 146 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 11 116 2.8E-19 T 12-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA N288_09035 ced09c267d6362b404a5f04c5a489647 146 SUPERFAMILY SSF158622 4 126 2.35E-32 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily N288_06715 90e5a292660f90390d286391e4c16b33 538 SUPERFAMILY SSF56801 6 534 1.57E-136 T 12-10-2018 N288_06715 90e5a292660f90390d286391e4c16b33 538 Gene3D G3DSA:3.30.300.310 432 537 6.9E-33 T 12-10-2018 N288_06715 90e5a292660f90390d286391e4c16b33 538 Pfam PF13193 AMP-binding enzyme C-terminal domain 446 521 3.4E-18 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain N288_06715 90e5a292660f90390d286391e4c16b33 538 Pfam PF00501 AMP-binding enzyme 17 436 7.9E-93 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 N288_06715 90e5a292660f90390d286391e4c16b33 538 Gene3D G3DSA:3.40.50.12780 1 431 9.1E-125 T 12-10-2018 N288_06630 17503ab09abc6e03b0e1bce8375b8fe0 298 Pfam PF13556 PucR C-terminal helix-turn-helix domain 235 292 1.2E-19 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain N288_06630 17503ab09abc6e03b0e1bce8375b8fe0 298 SUPERFAMILY SSF46689 190 270 4.26E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 N288_06630 17503ab09abc6e03b0e1bce8375b8fe0 298 Gene3D G3DSA:1.10.10.2840 174 298 8.9E-21 T 12-10-2018 N288_25660 46e93d11e47ab8a8e51b7c762559383e 468 SUPERFAMILY SSF51126 5 345 9.61E-38 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor N288_25660 46e93d11e47ab8a8e51b7c762559383e 468 SMART SM00710 78 104 1600.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_25660 46e93d11e47ab8a8e51b7c762559383e 468 SMART SM00710 181 208 480.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_25660 46e93d11e47ab8a8e51b7c762559383e 468 SMART SM00710 210 232 590.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_25660 46e93d11e47ab8a8e51b7c762559383e 468 SMART SM00710 113 144 2900.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_25660 46e93d11e47ab8a8e51b7c762559383e 468 SMART SM00710 241 263 3000.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat N288_25660 46e93d11e47ab8a8e51b7c762559383e 468 Gene3D G3DSA:2.160.20.10 5 333 5.1E-22 T 12-10-2018 IPR012334 Pectin lyase fold N288_25660 46e93d11e47ab8a8e51b7c762559383e 468 Pfam PF13229 Right handed beta helix region 149 319 2.1E-9 T 12-10-2018 IPR039448 Right handed beta helix domain N288_21415 b42e1c4b5710de370de3ffc38cb08dcc 258 Pfam PF01925 Sulfite exporter TauE/SafE 9 252 4.3E-41 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 N288_04865 141b1fe4b15476ae1f79dfdf4209afb3 71 Gene3D G3DSA:3.90.20.10 1 68 4.2E-5 T 12-10-2018 N288_13610 e7ad62bda9be6e6f37549889e8c246c2 295 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 187 215 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 N288_13610 e7ad62bda9be6e6f37549889e8c246c2 295 Gene3D G3DSA:3.40.50.720 3 293 2.9E-90 T 12-10-2018 N288_13610 e7ad62bda9be6e6f37549889e8c246c2 295 SUPERFAMILY SSF51735 49 292 4.17E-77 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_13610 e7ad62bda9be6e6f37549889e8c246c2 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 219 5.3E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13610 e7ad62bda9be6e6f37549889e8c246c2 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 139 5.3E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13610 e7ad62bda9be6e6f37549889e8c246c2 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 256 276 5.3E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13610 e7ad62bda9be6e6f37549889e8c246c2 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 52 69 5.3E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13610 e7ad62bda9be6e6f37549889e8c246c2 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 190 5.3E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13610 e7ad62bda9be6e6f37549889e8c246c2 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 238 5.3E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13610 e7ad62bda9be6e6f37549889e8c246c2 295 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 60 292 1.0E-58 T 12-10-2018 N288_13610 e7ad62bda9be6e6f37549889e8c246c2 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 180 188 9.0E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13610 e7ad62bda9be6e6f37549889e8c246c2 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 200 219 9.0E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13610 e7ad62bda9be6e6f37549889e8c246c2 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 139 9.0E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_13770 65c2e17c1ce339ee83c5944dfeddc4ee 166 SUPERFAMILY SSF53254 1 138 4.28E-23 T 12-10-2018 IPR029033 Histidine phosphatase superfamily N288_13770 65c2e17c1ce339ee83c5944dfeddc4ee 166 Gene3D G3DSA:3.40.50.1240 1 145 1.2E-25 T 12-10-2018 IPR029033 Histidine phosphatase superfamily N288_13770 65c2e17c1ce339ee83c5944dfeddc4ee 166 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 1 131 4.8E-22 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 N288_19570 94dea72d41931a3111b6113b3a857d17 311 TIGRFAM TIGR01932 hflC: HflC protein 26 305 4.1E-64 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 N288_19570 94dea72d41931a3111b6113b3a857d17 311 SUPERFAMILY SSF117892 72 213 6.54E-22 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily N288_19570 94dea72d41931a3111b6113b3a857d17 311 Gene3D G3DSA:3.30.479.30 69 209 1.0E-22 T 12-10-2018 N288_19570 94dea72d41931a3111b6113b3a857d17 311 Pfam PF01145 SPFH domain / Band 7 family 44 225 4.5E-29 T 12-10-2018 IPR001107 Band 7 domain N288_19570 94dea72d41931a3111b6113b3a857d17 311 SMART SM00244 40 208 5.4E-26 T 12-10-2018 IPR001107 Band 7 domain N288_19570 94dea72d41931a3111b6113b3a857d17 311 PIRSF PIRSF005651 16 311 5.6E-99 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 N288_24545 aff4a18db9b4ea9d802a484d3be499bf 100 Gene3D G3DSA:1.10.10.10 3 98 9.7E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_24545 aff4a18db9b4ea9d802a484d3be499bf 100 SMART SM00418 14 93 9.2E-22 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_24545 aff4a18db9b4ea9d802a484d3be499bf 100 SUPERFAMILY SSF46785 10 94 4.22E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_24545 aff4a18db9b4ea9d802a484d3be499bf 100 SMART SM00419 28 78 8.8E-4 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 N288_24545 aff4a18db9b4ea9d802a484d3be499bf 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 1.2E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_24545 aff4a18db9b4ea9d802a484d3be499bf 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 1.2E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_24545 aff4a18db9b4ea9d802a484d3be499bf 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 1.2E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_24545 aff4a18db9b4ea9d802a484d3be499bf 100 Pfam PF01022 Bacterial regulatory protein, arsR family 21 66 1.2E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 N288_20650 feb3e3e79b580c775448750d269552e1 135 SUPERFAMILY SSF160755 1 132 6.41E-39 T 12-10-2018 IPR036491 YugN-like superfamily N288_20650 feb3e3e79b580c775448750d269552e1 135 Pfam PF08868 YugN-like family 3 131 4.6E-57 T 12-10-2018 IPR014967 Uncharacterised protein family, YugN-like N288_20650 feb3e3e79b580c775448750d269552e1 135 Gene3D G3DSA:3.30.310.100 4 110 9.5E-29 T 12-10-2018 IPR036491 YugN-like superfamily N288_19320 a718a9ec70df514a22a77135ecf97e92 361 SMART SM00909 102 191 1.6E-23 T 12-10-2018 IPR019606 GerMN domain N288_19320 a718a9ec70df514a22a77135ecf97e92 361 SMART SM00909 252 341 4.1E-19 T 12-10-2018 IPR019606 GerMN domain N288_19320 a718a9ec70df514a22a77135ecf97e92 361 Pfam PF10646 Sporulation and spore germination 224 335 2.2E-15 T 12-10-2018 IPR019606 GerMN domain N288_19320 a718a9ec70df514a22a77135ecf97e92 361 Pfam PF10646 Sporulation and spore germination 79 187 1.8E-22 T 12-10-2018 IPR019606 GerMN domain N288_07650 eaec99b84ea6545679a22b7c3d8f8eec 191 Gene3D G3DSA:3.40.630.30 1 135 8.1E-24 T 12-10-2018 N288_07650 eaec99b84ea6545679a22b7c3d8f8eec 191 Pfam PF13508 Acetyltransferase (GNAT) domain 49 110 1.9E-9 T 12-10-2018 IPR000182 GNAT domain N288_07650 eaec99b84ea6545679a22b7c3d8f8eec 191 SUPERFAMILY SSF55729 13 113 4.71E-10 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_25930 50bacba6ed381fc2363688182c1d0ae4 173 Pfam PF00436 Single-strand binding protein family 2 103 6.7E-38 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 N288_25930 50bacba6ed381fc2363688182c1d0ae4 173 SUPERFAMILY SSF50249 1 173 2.34E-57 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold N288_25930 50bacba6ed381fc2363688182c1d0ae4 173 Gene3D G3DSA:2.40.50.140 1 110 1.7E-46 T 12-10-2018 N288_25930 50bacba6ed381fc2363688182c1d0ae4 173 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 37.26 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 N288_25930 50bacba6ed381fc2363688182c1d0ae4 173 PIRSF PIRSF002070 1 165 1.5E-40 T 12-10-2018 N288_25930 50bacba6ed381fc2363688182c1d0ae4 173 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 173 4.6E-50 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 N288_07235 478611baac442061af7fd55645449d22 58 PIRSF PIRSF037666 1 58 1.3E-35 T 12-10-2018 IPR017257 Spore germination protein GerPD, predicted N288_19830 a30b1805192d5e46ebe5a7e848325f9c 565 Hamap MF_00728 Septation ring formation regulator EzrA [ezrA]. 1 562 21.533 T 12-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 N288_19830 a30b1805192d5e46ebe5a7e848325f9c 565 Pfam PF06160 Septation ring formation regulator, EzrA 3 558 9.8E-184 T 12-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 N288_05125 d262a4cfe3c72206e719ff205382fc32 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 285 2.9E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_05125 d262a4cfe3c72206e719ff205382fc32 295 Gene3D G3DSA:1.10.3720.10 52 294 2.0E-72 T 12-10-2018 IPR035906 MetI-like superfamily N288_05125 d262a4cfe3c72206e719ff205382fc32 295 SUPERFAMILY SSF160964 6 68 6.02E-5 T 12-10-2018 N288_05125 d262a4cfe3c72206e719ff205382fc32 295 SUPERFAMILY SSF161098 57 283 6.67E-61 T 12-10-2018 IPR035906 MetI-like superfamily N288_07080 f983745d70824f4eff7e6e4232a4fd93 427 Pfam PF01435 Peptidase family M48 208 416 1.4E-33 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 N288_07080 f983745d70824f4eff7e6e4232a4fd93 427 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 54 204 5.1E-19 T 12-10-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 N288_07080 f983745d70824f4eff7e6e4232a4fd93 427 Gene3D G3DSA:3.30.2010.10 204 285 1.0E-22 T 12-10-2018 N288_13215 625c356c6d954834421639a1b2b6aa5c 260 Pfam PF08892 YqcI/YcgG family 26 240 4.7E-72 T 12-10-2018 IPR014988 Uncharacterised protein family, YqcI/YcgG N288_18135 85565f76982e13de97d52b6018962e78 485 PIRSF PIRSF005690 4 485 1.1E-137 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 N288_18135 85565f76982e13de97d52b6018962e78 485 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 18 476 5.4E-162 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 N288_05345 7d6930b541d4f8ecc2dc30c4956f550d 323 Gene3D G3DSA:3.40.50.1820 72 323 3.2E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_05345 7d6930b541d4f8ecc2dc30c4956f550d 323 SUPERFAMILY SSF53474 78 320 5.85E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_05345 7d6930b541d4f8ecc2dc30c4956f550d 323 Pfam PF12146 Serine aminopeptidase, S33 103 214 2.5E-13 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 N288_05345 7d6930b541d4f8ecc2dc30c4956f550d 323 Pfam PF12146 Serine aminopeptidase, S33 240 298 1.8E-6 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 N288_17510 a986951fcf9b63a7642764b13e84a240 184 Gene3D G3DSA:3.30.460.10 4 174 1.5E-50 T 12-10-2018 N288_17510 a986951fcf9b63a7642764b13e84a240 184 Pfam PF04229 GrpB protein 8 165 1.1E-48 T 12-10-2018 IPR007344 GrpB/Dephospho-CoA kinase N288_17510 a986951fcf9b63a7642764b13e84a240 184 SUPERFAMILY SSF81301 10 173 2.65E-47 T 12-10-2018 N288_00295 be7c2e74f76fdb398cd0fce65a4dbac3 87 Gene3D G3DSA:2.30.30.100 1 78 2.5E-26 T 12-10-2018 N288_00295 be7c2e74f76fdb398cd0fce65a4dbac3 87 Pfam PF06257 Biofilm formation stimulator VEG 4 74 6.2E-31 T 12-10-2018 IPR009366 Protein Veg GO:0006355 N288_00295 be7c2e74f76fdb398cd0fce65a4dbac3 87 PIRSF PIRSF037257 1 85 3.1E-36 T 12-10-2018 IPR009366 Protein Veg GO:0006355 N288_19685 cc398afe42a90c2de11699d832b5ec6c 103 Pfam PF14007 YtpI-like protein 5 90 1.6E-37 T 12-10-2018 IPR025618 YtpI-like protein N288_12700 f4ff8f1dce766e6a59452c86f3cca19e 111 Pfam PF13028 Protein of unknown function (DUF3889) 17 108 1.6E-36 T 12-10-2018 IPR024987 Protein of unknown function DUF3889 N288_12700 f4ff8f1dce766e6a59452c86f3cca19e 111 Gene3D G3DSA:3.10.450.390 26 110 2.4E-30 T 12-10-2018 N288_23185 625f8994fd8dcd0c520c6f85cb473866 409 SUPERFAMILY SSF103473 3 393 2.62E-65 T 12-10-2018 IPR036259 MFS transporter superfamily N288_23185 625f8994fd8dcd0c520c6f85cb473866 409 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 390 8.5E-107 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 N288_23185 625f8994fd8dcd0c520c6f85cb473866 409 Gene3D G3DSA:1.20.1720.10 11 389 6.0E-99 T 12-10-2018 N288_23185 625f8994fd8dcd0c520c6f85cb473866 409 Pfam PF07690 Major Facilitator Superfamily 18 355 1.4E-46 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_24825 f84d12aa34081e49422db404d0764695 230 Pfam PF04172 LrgB-like family 14 225 3.4E-70 T 12-10-2018 IPR007300 CidB/LrgB family N288_21555 eb5e8c7325eb61320a78cd7c9a6d38ec 152 Pfam PF10027 Predicted integral membrane protein (DUF2269) 6 151 8.0E-33 T 12-10-2018 IPR018729 Protein of unknown function DUF2269, transmembrane N288_24490 99268ae96a160bbe234a5625a8713fe6 253 SUPERFAMILY SSF52540 3 229 1.05E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_24490 99268ae96a160bbe234a5625a8713fe6 253 SMART SM00382 32 220 1.5E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_24490 99268ae96a160bbe234a5625a8713fe6 253 Gene3D G3DSA:3.40.50.300 1 250 2.5E-65 T 12-10-2018 N288_24490 99268ae96a160bbe234a5625a8713fe6 253 Pfam PF00005 ABC transporter 23 171 3.3E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_16225 406f7af595632547b759a384908c1ec6 87 Pfam PF10842 Protein of unknown function (DUF2642) 25 86 2.9E-30 T 12-10-2018 IPR020139 Protein of unknown function DUF2642 N288_16225 406f7af595632547b759a384908c1ec6 87 ProDom PD058323 YUZF BH2251 22 86 2.0E-13 T 12-10-2018 IPR020139 Protein of unknown function DUF2642 N288_02590 1b3872f7d85b51a8d4e0ff77e6f88272 478 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 316 427 1.7E-21 T 12-10-2018 IPR025299 CstA, C-terminal domain N288_02590 1b3872f7d85b51a8d4e0ff77e6f88272 478 Pfam PF02554 Carbon starvation protein CstA 5 201 1.2E-29 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 N288_08110 9add20a24120e07b6f377b298d280fd6 515 SMART SM00244 118 300 3.9E-8 T 12-10-2018 IPR001107 Band 7 domain N288_08110 9add20a24120e07b6f377b298d280fd6 515 Pfam PF15975 Flotillin 367 460 6.3E-13 T 12-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 N288_08110 9add20a24120e07b6f377b298d280fd6 515 Pfam PF01145 SPFH domain / Band 7 family 29 218 3.3E-24 T 12-10-2018 IPR001107 Band 7 domain N288_08110 9add20a24120e07b6f377b298d280fd6 515 Gene3D G3DSA:3.30.479.30 76 192 8.0E-38 T 12-10-2018 N288_08110 9add20a24120e07b6f377b298d280fd6 515 SUPERFAMILY SSF117892 67 209 3.01E-34 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily N288_12985 5faa9c682893b77ed9612b5829a6a05e 148 Pfam PF00583 Acetyltransferase (GNAT) family 20 113 2.6E-14 T 12-10-2018 IPR000182 GNAT domain N288_12985 5faa9c682893b77ed9612b5829a6a05e 148 Gene3D G3DSA:3.40.630.30 6 148 5.4E-39 T 12-10-2018 N288_12985 5faa9c682893b77ed9612b5829a6a05e 148 SUPERFAMILY SSF55729 3 146 8.61E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_01560 02e4b417938cd9de7d408df8a731b256 198 SMART SM00331 8 197 3.9E-25 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_01560 02e4b417938cd9de7d408df8a731b256 198 Gene3D G3DSA:3.60.40.10 2 197 2.9E-35 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_01560 02e4b417938cd9de7d408df8a731b256 198 SUPERFAMILY SSF81606 10 194 4.97E-11 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_01560 02e4b417938cd9de7d408df8a731b256 198 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 35 157 6.4E-6 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 N288_24805 cadb45005f72670a54eea394273c09ff 211 Pfam PF13021 Domain of unknown function (DUF3885) 177 211 1.3E-11 T 12-10-2018 IPR024976 Domain of unknown function DUF3885 N288_20080 d874b140881912f6026f0dbbdaa561c6 395 Pfam PF05975 Bacterial ABC transporter protein EcsB 6 381 2.4E-40 T 12-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 N288_09740 c9f431f22906e3b47d64d683fa19c279 270 SUPERFAMILY SSF117143 98 230 1.14E-32 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like N288_09740 c9f431f22906e3b47d64d683fa19c279 270 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 11 249 1.1E-54 T 12-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 N288_09740 c9f431f22906e3b47d64d683fa19c279 270 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 17 37 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site N288_09740 c9f431f22906e3b47d64d683fa19c279 270 Pfam PF00460 Flagella basal body rod protein 11 41 5.9E-12 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 N288_09740 c9f431f22906e3b47d64d683fa19c279 270 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 191 268 2.8E-24 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain N288_09740 c9f431f22906e3b47d64d683fa19c279 270 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 9 144 8.2E-41 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G N288_09740 c9f431f22906e3b47d64d683fa19c279 270 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 154 251 1.2E-29 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G N288_04120 004f6c80466de5c8f53d99ff7906dc65 175 SUPERFAMILY SSF52980 63 171 1.13E-25 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 N288_04120 004f6c80466de5c8f53d99ff7906dc65 175 Gene3D G3DSA:3.40.1350.10 62 172 9.5E-13 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 N288_04120 004f6c80466de5c8f53d99ff7906dc65 175 Pfam PF04471 Restriction endonuclease 59 168 3.3E-30 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 N288_17435 a4c5787e74ed1de8ecbc956f90af9c5d 116 TIGRFAM TIGR02886 spore_II_AA: anti-sigma F factor antagonist 7 110 9.3E-46 T 12-10-2018 IPR014237 Anti-sigma F factor antagonist GO:0006355|GO:0030435|GO:0045152 N288_17435 a4c5787e74ed1de8ecbc956f90af9c5d 116 Pfam PF01740 STAS domain 7 107 4.4E-23 T 12-10-2018 IPR002645 STAS domain N288_17435 a4c5787e74ed1de8ecbc956f90af9c5d 116 Gene3D G3DSA:3.30.750.24 2 116 8.7E-33 T 12-10-2018 IPR036513 STAS domain superfamily N288_17435 a4c5787e74ed1de8ecbc956f90af9c5d 116 SUPERFAMILY SSF52091 5 111 1.49E-30 T 12-10-2018 IPR036513 STAS domain superfamily N288_17435 a4c5787e74ed1de8ecbc956f90af9c5d 116 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 107 3.9E-38 T 12-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 N288_12975 50b75c397911dc92fb74d56a75b98860 254 SUPERFAMILY SSF103473 5 247 7.06E-5 T 12-10-2018 IPR036259 MFS transporter superfamily N288_12975 50b75c397911dc92fb74d56a75b98860 254 Pfam PF02517 CAAX protease self-immunity 136 238 6.7E-12 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 N288_03360 15503fedfd9896c2e9668c81247d334d 145 Pfam PF06935 Protein of unknown function (DUF1284) 20 126 1.9E-22 T 12-10-2018 IPR009702 Protein of unknown function DUF1284 N288_16465 e1ba5c22942c7ac5be9a542b68de4a0c 282 Gene3D G3DSA:3.40.50.10170 1 151 6.1E-41 T 12-10-2018 N288_16465 e1ba5c22942c7ac5be9a542b68de4a0c 282 SUPERFAMILY SSF82549 3 278 2.88E-71 T 12-10-2018 N288_16465 e1ba5c22942c7ac5be9a542b68de4a0c 282 Gene3D G3DSA:3.30.1180.10 153 279 8.6E-30 T 12-10-2018 N288_16465 e1ba5c22942c7ac5be9a542b68de4a0c 282 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 278 7.6E-70 T 12-10-2018 IPR003797 DegV N288_16465 e1ba5c22942c7ac5be9a542b68de4a0c 282 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 6 277 4.4E-73 T 12-10-2018 IPR003797 DegV N288_13330 781dd77139f2174e2e9dfa936531e8a7 219 Pfam PF13559 Domain of unknown function (DUF4129) 129 194 2.8E-6 T 12-10-2018 IPR025403 Domain of unknown function DUF4129 N288_20595 bc5dbbb7d18647b3856f78fa7d73afe1 194 SUPERFAMILY SSF55729 12 183 3.96E-47 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_20595 bc5dbbb7d18647b3856f78fa7d73afe1 194 Gene3D G3DSA:3.40.630.30 6 189 1.8E-45 T 12-10-2018 N288_20595 bc5dbbb7d18647b3856f78fa7d73afe1 194 Pfam PF13302 Acetyltransferase (GNAT) domain 19 159 1.2E-30 T 12-10-2018 IPR000182 GNAT domain N288_07455 2ef1cccf23899a21f1eaf410d7509aa3 102 SUPERFAMILY SSF117916 2 100 1.57E-32 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily N288_07455 2ef1cccf23899a21f1eaf410d7509aa3 102 Pfam PF01883 Iron-sulfur cluster assembly protein 6 80 9.9E-22 T 12-10-2018 IPR002744 MIP18 family-like N288_07455 2ef1cccf23899a21f1eaf410d7509aa3 102 Gene3D G3DSA:3.30.300.130 1 102 3.2E-36 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily N288_07945 f225a2daf32e6f342b26ea328fef31f6 109 Pfam PF12986 Domain of unknown function (DUF3870) 8 100 1.4E-32 T 12-10-2018 IPR024617 Domain of unknown function DUF3870 N288_22690 6dc4150fd5a6699d8b2b2ba06c022bf5 283 Gene3D G3DSA:3.20.20.150 1 272 8.1E-48 T 12-10-2018 N288_22690 6dc4150fd5a6699d8b2b2ba06c022bf5 283 SUPERFAMILY SSF51658 2 270 7.33E-49 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily N288_22690 6dc4150fd5a6699d8b2b2ba06c022bf5 283 Pfam PF01261 Xylose isomerase-like TIM barrel 26 224 3.7E-21 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain N288_12670 55526845ee82b76d06a0949df9d1f837 367 Gene3D G3DSA:3.30.300.210 219 367 3.1E-16 T 12-10-2018 IPR038501 Spore germination GerAC superfamily N288_12670 55526845ee82b76d06a0949df9d1f837 367 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 3 366 4.4E-71 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 N288_12670 55526845ee82b76d06a0949df9d1f837 367 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 202 358 1.2E-19 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 N288_02010 52a410ca361f5397cf87b61b46a99337 207 PIRSF PIRSF006324 1 206 4.7E-60 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 N288_02010 52a410ca361f5397cf87b61b46a99337 207 Pfam PF01810 LysE type translocator 12 204 3.1E-37 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 N288_18020 eefa0f637bac8180eea273b251932bc7 129 Pfam PF14173 ComG operon protein 7 32 127 2.1E-26 T 12-10-2018 IPR020372 Competence operon G protein 7, ComGG N288_15100 4cc13f9d48149bb3b699636d9112d84e 65 Gene3D G3DSA:3.40.50.300 1 65 5.0E-18 T 12-10-2018 N288_15100 4cc13f9d48149bb3b699636d9112d84e 65 SUPERFAMILY SSF52540 2 65 2.18E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_15100 4cc13f9d48149bb3b699636d9112d84e 65 Pfam PF00005 ABC transporter 21 62 4.8E-11 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_21825 17e9e2e714f87ebb749059c4efd89a5c 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 211 1.7E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_21825 17e9e2e714f87ebb749059c4efd89a5c 216 SUPERFAMILY SSF161098 7 200 1.83E-45 T 12-10-2018 IPR035906 MetI-like superfamily N288_21825 17e9e2e714f87ebb749059c4efd89a5c 216 Gene3D G3DSA:1.10.3720.10 4 216 1.4E-47 T 12-10-2018 IPR035906 MetI-like superfamily N288_01195 38b0ee48fd3afab40899697fc322e10e 554 Pfam PF05552 Conserved TM helix 194 241 5.3E-17 T 12-10-2018 IPR008910 Conserved TM helix N288_01195 38b0ee48fd3afab40899697fc322e10e 554 Pfam PF05552 Conserved TM helix 12 53 3.9E-10 T 12-10-2018 IPR008910 Conserved TM helix N288_01195 38b0ee48fd3afab40899697fc322e10e 554 Pfam PF05552 Conserved TM helix 97 143 3.7E-8 T 12-10-2018 IPR008910 Conserved TM helix N288_01195 38b0ee48fd3afab40899697fc322e10e 554 Pfam PF05552 Conserved TM helix 383 425 3.0E-7 T 12-10-2018 IPR008910 Conserved TM helix N288_01195 38b0ee48fd3afab40899697fc322e10e 554 Pfam PF05552 Conserved TM helix 288 336 3.8E-11 T 12-10-2018 IPR008910 Conserved TM helix N288_21575 fab66aa87aeb34bd1c6f0f1f5f983112 77 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 75 2.9E-24 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 N288_21575 fab66aa87aeb34bd1c6f0f1f5f983112 77 Pfam PF03840 Preprotein translocase SecG subunit 4 74 6.5E-23 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 N288_21575 fab66aa87aeb34bd1c6f0f1f5f983112 77 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 9.8E-15 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 N288_21575 fab66aa87aeb34bd1c6f0f1f5f983112 77 PRINTS PR01651 Protein-export SecG membrane protein signature 56 77 9.8E-15 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 N288_21575 fab66aa87aeb34bd1c6f0f1f5f983112 77 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 9.8E-15 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 N288_17495 93ac670292ceef55cdf83539e9c88224 184 ProSitePatterns PS00893 Nudix box signature. 78 99 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_17495 93ac670292ceef55cdf83539e9c88224 184 Gene3D G3DSA:3.90.79.10 5 183 8.5E-58 T 12-10-2018 N288_17495 93ac670292ceef55cdf83539e9c88224 184 Pfam PF00293 NUDIX domain 43 158 1.4E-19 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_17495 93ac670292ceef55cdf83539e9c88224 184 SUPERFAMILY SSF55811 8 178 1.62E-50 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_11355 86865ed7db9b3dcd8556f89fabd7c15f 152 SUPERFAMILY SSF51182 2 149 8.92E-44 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily N288_11355 86865ed7db9b3dcd8556f89fabd7c15f 152 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 3 148 9.0E-29 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 N288_11355 86865ed7db9b3dcd8556f89fabd7c15f 152 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 2 148 2.4E-27 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 N288_11355 86865ed7db9b3dcd8556f89fabd7c15f 152 Gene3D G3DSA:2.60.120.10 1 151 5.6E-57 T 12-10-2018 IPR014710 RmlC-like jelly roll fold N288_00225 621da8e558e29d88354e0c7e11f2219b 275 Pfam PF04468 PSP1 C-terminal conserved region 61 146 2.2E-31 T 12-10-2018 IPR007557 PSP1, C-terminal N288_24950 6c13136be43d86cf5cf4fec18e77a7e4 288 SMART SM00382 28 207 2.1E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_24950 6c13136be43d86cf5cf4fec18e77a7e4 288 Gene3D G3DSA:3.40.50.300 4 225 2.2E-46 T 12-10-2018 N288_24950 6c13136be43d86cf5cf4fec18e77a7e4 288 Pfam PF00005 ABC transporter 20 158 5.8E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_24950 6c13136be43d86cf5cf4fec18e77a7e4 288 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_24950 6c13136be43d86cf5cf4fec18e77a7e4 288 SUPERFAMILY SSF52540 3 222 3.45E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_03020 d038af77731d33428ffafb459d73a143 189 Gene3D G3DSA:3.40.50.1820 2 189 8.2E-20 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_03020 d038af77731d33428ffafb459d73a143 189 SUPERFAMILY SSF53474 4 188 1.24E-18 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_03020 d038af77731d33428ffafb459d73a143 189 Pfam PF01738 Dienelactone hydrolase family 4 188 1.1E-16 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 N288_09690 0d5175e361b39a2ef5396ab3894a2794 102 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 22 102 3.9E-29 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 N288_09690 0d5175e361b39a2ef5396ab3894a2794 102 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 102 1.5E-30 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 N288_09690 0d5175e361b39a2ef5396ab3894a2794 102 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 87 100 6.0E-18 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 N288_09690 0d5175e361b39a2ef5396ab3894a2794 102 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 66 82 6.0E-18 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 N288_09690 0d5175e361b39a2ef5396ab3894a2794 102 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 6.0E-18 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 N288_09690 0d5175e361b39a2ef5396ab3894a2794 102 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 7 102 18.713 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 N288_19100 b49262bf2b3854f0785d0137e37706d8 401 Pfam PF00482 Type II secretion system (T2SS), protein F 271 392 4.5E-30 T 12-10-2018 IPR018076 Type II secretion system F domain N288_19100 b49262bf2b3854f0785d0137e37706d8 401 Pfam PF00482 Type II secretion system (T2SS), protein F 67 190 5.9E-33 T 12-10-2018 IPR018076 Type II secretion system F domain N288_19100 b49262bf2b3854f0785d0137e37706d8 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 365 379 3.3E-19 T 12-10-2018 IPR003004 GspF/PilC family N288_19100 b49262bf2b3854f0785d0137e37706d8 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 63 75 3.3E-19 T 12-10-2018 IPR003004 GspF/PilC family N288_19100 b49262bf2b3854f0785d0137e37706d8 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 381 400 3.3E-19 T 12-10-2018 IPR003004 GspF/PilC family N288_19100 b49262bf2b3854f0785d0137e37706d8 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 162 190 3.3E-19 T 12-10-2018 IPR003004 GspF/PilC family N288_19100 b49262bf2b3854f0785d0137e37706d8 401 Gene3D G3DSA:1.20.81.30 253 364 1.7E-32 T 12-10-2018 N288_19100 b49262bf2b3854f0785d0137e37706d8 401 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 162 190 - T 12-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 N288_19100 b49262bf2b3854f0785d0137e37706d8 401 Gene3D G3DSA:1.20.81.30 55 169 1.2E-30 T 12-10-2018 N288_17080 5eabb97bcf3052e0ad146af8c38f4d2b 67 ProDom PD054986 YPHE TRANSMEMBRANE MEMBRANE PRECURSOR BH1643 SIGNAL 1 67 2.0E-17 T 12-10-2018 IPR020076 Protein of unknown function DUF2768 N288_17080 5eabb97bcf3052e0ad146af8c38f4d2b 67 Pfam PF10966 Protein of unknown function (DUF2768) 7 64 4.5E-27 T 12-10-2018 IPR020076 Protein of unknown function DUF2768 N288_14190 5d03ec3c810bfe457184a068e8c46b3a 193 Pfam PF13302 Acetyltransferase (GNAT) domain 12 151 5.2E-22 T 12-10-2018 IPR000182 GNAT domain N288_14190 5d03ec3c810bfe457184a068e8c46b3a 193 SUPERFAMILY SSF55729 8 177 3.78E-43 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_14190 5d03ec3c810bfe457184a068e8c46b3a 193 Gene3D G3DSA:3.40.630.30 2 178 1.7E-46 T 12-10-2018 N288_23610 ff4b1ba7602a7c066e561388d88e6889 342 TIGRFAM TIGR02870 spore_II_D: stage II sporulation protein D 7 330 8.1E-126 T 12-10-2018 IPR014225 Sporulation stage II, protein D firmicutes N288_23610 ff4b1ba7602a7c066e561388d88e6889 342 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 70 329 5.9E-72 T 12-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 N288_23610 ff4b1ba7602a7c066e561388d88e6889 342 Pfam PF08486 Stage II sporulation protein 67 170 1.3E-25 T 12-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal N288_01680 6589f7549106dadc82a661fd12f947c6 84 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 3 78 4.7E-32 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 N288_01680 6589f7549106dadc82a661fd12f947c6 84 Gene3D G3DSA:3.30.1280.10 1 84 1.9E-36 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 N288_01680 6589f7549106dadc82a661fd12f947c6 84 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 10 80 1.0E-28 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 N288_01680 6589f7549106dadc82a661fd12f947c6 84 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 78 21.66 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 N288_01680 6589f7549106dadc82a661fd12f947c6 84 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 2 80 7.7E-34 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 N288_01680 6589f7549106dadc82a661fd12f947c6 84 SUPERFAMILY SSF82697 1 80 5.76E-29 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 N288_10875 ddba887690b1ab70bbfe1dfbb6aa80e4 55 Pfam PF12841 YvrJ protein family 7 40 5.8E-17 T 12-10-2018 IPR024419 Protein of unknown function YvrJ N288_13500 a621a52ea164df7cc056e4b745ddfe94 171 SUPERFAMILY SSF52540 5 131 1.7E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_13500 a621a52ea164df7cc056e4b745ddfe94 171 Pfam PF13238 AAA domain 7 105 1.1E-7 T 12-10-2018 N288_13500 a621a52ea164df7cc056e4b745ddfe94 171 Gene3D G3DSA:3.40.50.300 1 170 2.0E-17 T 12-10-2018 N288_24250 2b316c7565e0a9bcc5a7af6388d95f9d 370 SUPERFAMILY SSF52540 215 314 7.31E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_24250 2b316c7565e0a9bcc5a7af6388d95f9d 370 SUPERFAMILY SSF52540 28 76 4.1E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_24250 2b316c7565e0a9bcc5a7af6388d95f9d 370 Gene3D G3DSA:3.40.50.300 214 251 3.1E-6 T 12-10-2018 N288_15715 bb3e5fb7f7119885419df4f8399e665c 443 Pfam PF07670 Nucleoside recognition 133 231 2.8E-8 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 N288_16250 f193894e4aba39152e90d44842442bfb 196 Pfam PF04367 Protein of unknown function (DUF502) 56 157 2.7E-26 T 12-10-2018 IPR007462 Protein of unknown function DUF502 N288_02440 ec193f917c0a43b8e8f1de156ce886db 164 Pfam PF00583 Acetyltransferase (GNAT) family 45 143 3.0E-11 T 12-10-2018 IPR000182 GNAT domain N288_02440 ec193f917c0a43b8e8f1de156ce886db 164 Gene3D G3DSA:3.40.630.30 7 163 4.8E-18 T 12-10-2018 N288_02440 ec193f917c0a43b8e8f1de156ce886db 164 SUPERFAMILY SSF55729 11 151 6.69E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_04515 c72bd66f2ee6a735c991aded2e3ef3fe 242 Gene3D G3DSA:3.20.20.450 8 242 7.6E-54 T 12-10-2018 IPR035919 EAL domain superfamily N288_04515 c72bd66f2ee6a735c991aded2e3ef3fe 242 SMART SM00052 10 241 2.4E-15 T 12-10-2018 IPR001633 EAL domain N288_04515 c72bd66f2ee6a735c991aded2e3ef3fe 242 SUPERFAMILY SSF141868 18 238 3.14E-52 T 12-10-2018 IPR035919 EAL domain superfamily N288_04515 c72bd66f2ee6a735c991aded2e3ef3fe 242 Pfam PF00563 EAL domain 18 238 1.4E-46 T 12-10-2018 IPR001633 EAL domain N288_10830 352506401a1979508ab765c76b32aa40 101 Gene3D G3DSA:2.40.30.80 1 96 3.2E-31 T 12-10-2018 IPR023105 YkvR-like superfamily N288_10830 352506401a1979508ab765c76b32aa40 101 SUPERFAMILY SSF159173 3 101 1.02E-41 T 12-10-2018 IPR023105 YkvR-like superfamily N288_10830 352506401a1979508ab765c76b32aa40 101 Pfam PF11514 Protein of unknown function (DUF3219) 4 101 9.7E-48 T 12-10-2018 IPR021596 Protein of unknown function DUF3219 N288_13275 260553f69f8c85e7fafce0cdf781dc1f 200 Gene3D G3DSA:3.40.50.300 3 200 1.2E-85 T 12-10-2018 N288_13275 260553f69f8c85e7fafce0cdf781dc1f 200 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 9 192 3.9E-84 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 N288_13275 260553f69f8c85e7fafce0cdf781dc1f 200 SUPERFAMILY SSF52540 25 197 5.04E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_13275 260553f69f8c85e7fafce0cdf781dc1f 200 Pfam PF01583 Adenylylsulphate kinase 27 180 1.6E-73 T 12-10-2018 N288_13275 260553f69f8c85e7fafce0cdf781dc1f 200 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 25 198 39.096 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 N288_10710 44716479ea085758bf766f6b1d289271 300 Pfam PF05448 Acetyl xylan esterase (AXE1) 50 190 7.6E-6 T 12-10-2018 IPR008391 Acetyl xylan esterase N288_10710 44716479ea085758bf766f6b1d289271 300 SUPERFAMILY SSF53474 32 300 2.52E-29 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_10710 44716479ea085758bf766f6b1d289271 300 Gene3D G3DSA:3.40.50.1820 2 298 2.6E-54 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_03440 d1170cad9bc92e079b147544d2ba396d 109 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 38 105 1.5E-12 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_03440 d1170cad9bc92e079b147544d2ba396d 109 Gene3D G3DSA:1.10.760.10 39 109 3.4E-28 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 N288_03440 d1170cad9bc92e079b147544d2ba396d 109 PIRSF PIRSF000025 1 109 8.2E-31 T 12-10-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 N288_03440 d1170cad9bc92e079b147544d2ba396d 109 SUPERFAMILY SSF46626 36 107 1.43E-14 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 N288_11550 d7ee9d00c48d5cb9fee7999b28b57d11 305 SUPERFAMILY SSF56529 82 303 1.57E-70 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 N288_11550 d7ee9d00c48d5cb9fee7999b28b57d11 305 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 83 303 7.3E-63 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 N288_11550 d7ee9d00c48d5cb9fee7999b28b57d11 305 Gene3D G3DSA:3.90.850.10 21 298 2.4E-91 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 N288_06005 2209a02ff130267d3853b777cc453ac2 276 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 230 245 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 N288_06005 2209a02ff130267d3853b777cc453ac2 276 SUPERFAMILY SSF51430 7 270 1.83E-98 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily N288_06005 2209a02ff130267d3853b777cc453ac2 276 PIRSF PIRSF000097 116 274 3.8E-55 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_06005 2209a02ff130267d3853b777cc453ac2 276 PIRSF PIRSF000097 3 121 2.3E-39 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_06005 2209a02ff130267d3853b777cc453ac2 276 Pfam PF00248 Aldo/keto reductase family 29 262 5.5E-54 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain N288_06005 2209a02ff130267d3853b777cc453ac2 276 Gene3D G3DSA:3.20.20.100 1 276 3.5E-127 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily N288_06005 2209a02ff130267d3853b777cc453ac2 276 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 126 143 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 N288_06005 2209a02ff130267d3853b777cc453ac2 276 PRINTS PR00069 Aldo-keto reductase signature 197 221 2.0E-54 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_06005 2209a02ff130267d3853b777cc453ac2 276 PRINTS PR00069 Aldo-keto reductase signature 40 64 2.0E-54 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_06005 2209a02ff130267d3853b777cc453ac2 276 PRINTS PR00069 Aldo-keto reductase signature 160 189 2.0E-54 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_06005 2209a02ff130267d3853b777cc453ac2 276 PRINTS PR00069 Aldo-keto reductase signature 96 114 2.0E-54 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_06005 2209a02ff130267d3853b777cc453ac2 276 PRINTS PR00069 Aldo-keto reductase signature 126 143 2.0E-54 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 N288_09290 bbf8881b0eb8822b5c3944ebd98d399b 171 Pfam PF05103 DivIVA protein 3 133 2.1E-52 T 12-10-2018 IPR007793 DivIVA family N288_09290 bbf8881b0eb8822b5c3944ebd98d399b 171 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 36 3.0E-18 T 12-10-2018 IPR019933 DivIVA domain N288_15510 bf0c68aae460f4d91551bf2ed82a7d1a 223 SUPERFAMILY SSF55729 1 69 2.51E-5 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_15510 bf0c68aae460f4d91551bf2ed82a7d1a 223 Gene3D G3DSA:3.40.630.30 1 80 3.0E-7 T 12-10-2018 N288_10690 7825256ac7306bf314d74297fec76b3d 228 SUPERFAMILY SSF52266 5 226 4.83E-49 T 12-10-2018 N288_10690 7825256ac7306bf314d74297fec76b3d 228 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 11 206 1.1E-16 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain N288_10690 7825256ac7306bf314d74297fec76b3d 228 Gene3D G3DSA:3.40.50.1110 5 228 6.5E-68 T 12-10-2018 IPR036514 SGNH hydrolase superfamily N288_09055 f4758993cea7feaf0aeba720ab328f2d 189 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 N288_09055 f4758993cea7feaf0aeba720ab328f2d 189 SUPERFAMILY SSF53335 1 180 6.38E-51 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_09055 f4758993cea7feaf0aeba720ab328f2d 189 PIRSF PIRSF004553 1 184 3.0E-49 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 N288_09055 f4758993cea7feaf0aeba720ab328f2d 189 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 178 7.1E-55 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 N288_09055 f4758993cea7feaf0aeba720ab328f2d 189 Pfam PF03602 Conserved hypothetical protein 95 1 180 1.8E-58 T 12-10-2018 N288_09055 f4758993cea7feaf0aeba720ab328f2d 189 Gene3D G3DSA:3.40.50.150 1 187 1.7E-57 T 12-10-2018 N288_12385 5976f0ac2ab9bec5c76755aa4670df62 200 Gene3D G3DSA:3.40.630.30 2 196 2.6E-45 T 12-10-2018 N288_12385 5976f0ac2ab9bec5c76755aa4670df62 200 Pfam PF13302 Acetyltransferase (GNAT) domain 16 153 8.3E-16 T 12-10-2018 IPR000182 GNAT domain N288_12385 5976f0ac2ab9bec5c76755aa4670df62 200 SUPERFAMILY SSF55729 5 180 1.17E-38 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_10585 1774349d8138a9c34d9a13460a1b513b 146 Pfam PF07486 Cell Wall Hydrolase 24 133 1.4E-16 T 12-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 N288_10585 1774349d8138a9c34d9a13460a1b513b 146 Gene3D G3DSA:1.10.10.2520 8 96 2.0E-11 T 12-10-2018 N288_20010 575e9a638f7d458b6df1086950858bcc 104 Pfam PF03413 Peptidase propeptide and YPEB domain 30 100 4.4E-9 T 12-10-2018 IPR025711 PepSY domain N288_17330 3825630713b8488c0fa855f38bea0581 195 Pfam PF07670 Nucleoside recognition 43 150 2.2E-11 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 N288_14980 9165c275965ff234be76b68d09a34f69 220 SUPERFAMILY SSF46785 150 203 2.9E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_14980 9165c275965ff234be76b68d09a34f69 220 Gene3D G3DSA:3.40.960.10 29 140 4.4E-8 T 12-10-2018 N288_24675 6cb947c3c13c4716bd6f3a560a3d4d0d 129 Pfam PF04463 Protein of unknown function (DUF523) 5 119 9.7E-32 T 12-10-2018 IPR007553 Domain of unknown function DUF523 N288_00480 4f215fe6d8ef7c212266c2f296fdc1a3 119 Pfam PF02152 Dihydroneopterin aldolase 4 116 2.1E-37 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 N288_00480 4f215fe6d8ef7c212266c2f296fdc1a3 119 Gene3D G3DSA:3.30.1130.10 1 119 9.7E-48 T 12-10-2018 N288_00480 4f215fe6d8ef7c212266c2f296fdc1a3 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 118 1.5E-38 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 N288_00480 4f215fe6d8ef7c212266c2f296fdc1a3 119 SUPERFAMILY SSF55620 2 119 1.61E-41 T 12-10-2018 N288_00480 4f215fe6d8ef7c212266c2f296fdc1a3 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 117 3.0E-42 T 12-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 N288_00480 4f215fe6d8ef7c212266c2f296fdc1a3 119 SMART SM00905 4 117 1.8E-52 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 N288_00075 3062f2548107b5ee941fb4aebbfac0c3 319 Pfam PF14175 YaaC-like Protein 11 313 1.5E-112 T 12-10-2018 IPR026988 YaaC-like protein N288_17035 b6fc64f49193b14bd67c60e9089a5e23 148 Pfam PF00334 Nucleoside diphosphate kinase 2 135 9.3E-59 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 N288_17035 b6fc64f49193b14bd67c60e9089a5e23 148 SMART SM00562 1 138 3.1E-93 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 N288_17035 b6fc64f49193b14bd67c60e9089a5e23 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 9.4E-53 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 N288_17035 b6fc64f49193b14bd67c60e9089a5e23 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 9.4E-53 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 N288_17035 b6fc64f49193b14bd67c60e9089a5e23 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 9.4E-53 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 N288_17035 b6fc64f49193b14bd67c60e9089a5e23 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 9.4E-53 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 N288_17035 b6fc64f49193b14bd67c60e9089a5e23 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 9.4E-53 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 N288_17035 b6fc64f49193b14bd67c60e9089a5e23 148 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 12-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 N288_17035 b6fc64f49193b14bd67c60e9089a5e23 148 SUPERFAMILY SSF54919 1 146 8.9E-62 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 N288_17035 b6fc64f49193b14bd67c60e9089a5e23 148 Gene3D G3DSA:3.30.70.141 1 148 2.4E-63 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 N288_17035 b6fc64f49193b14bd67c60e9089a5e23 148 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 38.018 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 N288_08250 c97f496d416140d64df7cc940e8ee313 335 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 43 215 2.9E-24 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase N288_08760 50739525bf1c9a4fb07fb856672fc692 298 SUPERFAMILY SSF103481 209 285 6.15E-12 T 12-10-2018 N288_08760 50739525bf1c9a4fb07fb856672fc692 298 Pfam PF00892 EamA-like transporter family 6 136 1.9E-28 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_08760 50739525bf1c9a4fb07fb856672fc692 298 Pfam PF00892 EamA-like transporter family 149 285 1.4E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 N288_08760 50739525bf1c9a4fb07fb856672fc692 298 SUPERFAMILY SSF103481 38 137 3.14E-15 T 12-10-2018 N288_03200 4ba405e942d23db8b646f11daac12dc1 187 Pfam PF08006 Protein of unknown function (DUF1700) 3 181 1.8E-68 T 12-10-2018 IPR012963 Protein of unknown function DUF1700 N288_06660 48228f50e49bbd25d40cbc495f2154c3 367 Pfam PF14398 YheC/D like ATP-grasp 98 349 4.0E-65 T 12-10-2018 IPR026838 Endospore coat-associated protein YheC/D N288_06660 48228f50e49bbd25d40cbc495f2154c3 367 SUPERFAMILY SSF56059 120 330 6.42E-14 T 12-10-2018 N288_25800 0cc654311f0cd50b2558b6c7da23d749 555 Pfam PF07694 5TMR of 5TMR-LYT 31 193 2.7E-44 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 N288_25800 0cc654311f0cd50b2558b6c7da23d749 555 SUPERFAMILY SSF55781 228 347 1.09E-5 T 12-10-2018 N288_25800 0cc654311f0cd50b2558b6c7da23d749 555 SMART SM00387 448 554 6.3E-4 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_25800 0cc654311f0cd50b2558b6c7da23d749 555 Pfam PF06580 Histidine kinase 361 439 5.4E-25 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 N288_25800 0cc654311f0cd50b2558b6c7da23d749 555 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 456 550 6.2E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase N288_25800 0cc654311f0cd50b2558b6c7da23d749 555 SUPERFAMILY SSF55874 416 549 1.24E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_25800 0cc654311f0cd50b2558b6c7da23d749 555 Gene3D G3DSA:1.10.1760.20 45 205 4.7E-11 T 12-10-2018 N288_25800 0cc654311f0cd50b2558b6c7da23d749 555 Gene3D G3DSA:3.30.565.10 413 554 3.9E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily N288_22925 0ee27ca5cc0fd1cd4cf0bcddbd16f865 111 Pfam PF11518 Protein of unknown function (DUF3221) 12 110 7.2E-13 T 12-10-2018 IPR021598 Protein of unknown function DUF3221 N288_22945 7bf6d40a15721cb7c00ac61334ffec75 364 Gene3D G3DSA:3.30.1370.60 71 320 3.4E-132 T 12-10-2018 N288_22945 7bf6d40a15721cb7c00ac61334ffec75 364 Pfam PF02615 Malate/L-lactate dehydrogenase 8 337 1.8E-127 T 12-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 N288_22945 7bf6d40a15721cb7c00ac61334ffec75 364 SUPERFAMILY SSF89733 6 347 4.19E-114 T 12-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 N288_22945 7bf6d40a15721cb7c00ac61334ffec75 364 Gene3D G3DSA:1.10.1530.10 13 340 3.4E-132 T 12-10-2018 N288_06615 712d8678210b78f6981f0c0db1b62e65 67 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 62 1.2E-23 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 N288_06615 712d8678210b78f6981f0c0db1b62e65 67 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 N288_06615 712d8678210b78f6981f0c0db1b62e65 67 Gene3D G3DSA:1.10.8.910 8 67 2.8E-31 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily N288_06615 712d8678210b78f6981f0c0db1b62e65 67 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 N288_21980 babbd6ee2a2c8f7d6adb5020824cf7a7 129 Pfam PF07070 SpoOM protein 4 127 2.2E-17 T 12-10-2018 IPR009776 Sporulation stage 0, protein M N288_19715 384e7b1833543377e7faab04b2e4d1ad 441 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 23 422 4.2E-24 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 N288_19715 384e7b1833543377e7faab04b2e4d1ad 441 Gene3D G3DSA:1.10.4160.10 15 438 3.2E-44 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily N288_25080 b4d0cece2f30d1545fde00671b67a138 350 Gene3D G3DSA:3.20.20.30 1 349 1.2E-91 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 N288_25080 b4d0cece2f30d1545fde00671b67a138 350 Pfam PF00296 Luciferase-like monooxygenase 1 307 3.5E-50 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 N288_25080 b4d0cece2f30d1545fde00671b67a138 350 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 2 339 2.5E-158 T 12-10-2018 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative N288_25080 b4d0cece2f30d1545fde00671b67a138 350 SUPERFAMILY SSF51679 1 340 2.83E-82 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 N288_16745 9558e013a031a658bbc836d2626b4121 100 Hamap MF_02011 Cell cycle protein GpsB [gpsB]. 3 96 24.746 T 12-10-2018 IPR011229 Cell cycle protein GpsB N288_16745 9558e013a031a658bbc836d2626b4121 100 Pfam PF05103 DivIVA protein 8 68 9.8E-18 T 12-10-2018 IPR007793 DivIVA family N288_16745 9558e013a031a658bbc836d2626b4121 100 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 8 41 3.5E-15 T 12-10-2018 IPR019933 DivIVA domain N288_16745 9558e013a031a658bbc836d2626b4121 100 PIRSF PIRSF029938 1 100 7.7E-41 T 12-10-2018 IPR011229 Cell cycle protein GpsB N288_01035 892314f2d548df031a2f5a455b52fba9 52 SUPERFAMILY SSF140500 1 51 2.88E-14 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 N288_01035 892314f2d548df031a2f5a455b52fba9 52 Pfam PF09388 Spo0E like sporulation regulatory protein 6 46 5.8E-15 T 12-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 N288_01035 892314f2d548df031a2f5a455b52fba9 52 Gene3D G3DSA:1.20.58.990 1 52 1.8E-11 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 N288_05190 72ad36d92d92780b990adf75c26b6055 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.8E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05190 72ad36d92d92780b990adf75c26b6055 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.8E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05190 72ad36d92d92780b990adf75c26b6055 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.8E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05190 72ad36d92d92780b990adf75c26b6055 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.8E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05190 72ad36d92d92780b990adf75c26b6055 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.8E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05190 72ad36d92d92780b990adf75c26b6055 261 Gene3D G3DSA:3.40.50.720 2 260 2.7E-51 T 12-10-2018 N288_05190 72ad36d92d92780b990adf75c26b6055 261 Pfam PF00106 short chain dehydrogenase 3 188 4.4E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR N288_05190 72ad36d92d92780b990adf75c26b6055 261 SUPERFAMILY SSF51735 2 235 8.36E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_22490 182cad3f9e0e36b192d5e2ca151ef183 319 SUPERFAMILY SSF88713 102 284 4.08E-30 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 N288_22490 182cad3f9e0e36b192d5e2ca151ef183 319 Pfam PF01522 Polysaccharide deacetylase 140 281 5.5E-21 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 N288_22490 182cad3f9e0e36b192d5e2ca151ef183 319 Gene3D G3DSA:3.20.20.370 68 318 5.1E-64 T 12-10-2018 N288_05035 9c562523c3ebcff21359598c1ac719b1 171 Pfam PF07308 Protein of unknown function (DUF1456) 103 170 1.9E-25 T 12-10-2018 IPR009921 Domain of unknown function DUF1456 N288_05035 9c562523c3ebcff21359598c1ac719b1 171 Pfam PF07308 Protein of unknown function (DUF1456) 3 80 5.7E-25 T 12-10-2018 IPR009921 Domain of unknown function DUF1456 N288_07605 5240277e6a7d68c4d9178b906886e91c 248 Pfam PF12227 Protein of unknown function (DUF3603) 35 248 4.8E-114 T 12-10-2018 IPR020909 UPF0736 N288_07605 5240277e6a7d68c4d9178b906886e91c 248 Hamap MF_01860 UPF0736 protein . 1 248 49.273 T 12-10-2018 IPR020909 UPF0736 N288_10940 edce618189527c99aeb30ec14370d181 278 Gene3D G3DSA:3.30.420.40 70 263 4.6E-82 T 12-10-2018 N288_10940 edce618189527c99aeb30ec14370d181 278 SUPERFAMILY SSF53067 2 276 4.44E-47 T 12-10-2018 N288_10940 edce618189527c99aeb30ec14370d181 278 Gene3D G3DSA:3.30.420.40 2 274 4.6E-82 T 12-10-2018 N288_10940 edce618189527c99aeb30ec14370d181 278 PIRSF PIRSF036940 1 278 3.5E-66 T 12-10-2018 IPR011602 Type II pantothenate kinase, bacterial GO:0004594|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 N288_10940 edce618189527c99aeb30ec14370d181 278 Pfam PF03630 Fumble 92 276 1.4E-26 T 12-10-2018 IPR004567 Type II pantothenate kinase GO:0004594|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|Reactome: R-HSA-196783 N288_12240 356aa775754ea6562fbd6701f0cc7cda 408 Gene3D G3DSA:1.20.1250.20 13 402 1.6E-34 T 12-10-2018 N288_12240 356aa775754ea6562fbd6701f0cc7cda 408 Pfam PF07690 Major Facilitator Superfamily 17 362 1.6E-26 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_12240 356aa775754ea6562fbd6701f0cc7cda 408 SUPERFAMILY SSF103473 15 399 3.01E-44 T 12-10-2018 IPR036259 MFS transporter superfamily N288_02710 374d72c2bc8638550ce9fdba966bbd69 403 Pfam PF07690 Major Facilitator Superfamily 16 325 3.4E-42 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_02710 374d72c2bc8638550ce9fdba966bbd69 403 Gene3D G3DSA:1.20.1250.20 6 383 3.5E-49 T 12-10-2018 N288_02710 374d72c2bc8638550ce9fdba966bbd69 403 SUPERFAMILY SSF103473 9 387 1.7E-60 T 12-10-2018 IPR036259 MFS transporter superfamily N288_19050 4c11d0cf44f27ce065438806ff9e6960 339 Gene3D G3DSA:3.30.420.40 9 323 5.0E-130 T 12-10-2018 N288_19050 4c11d0cf44f27ce065438806ff9e6960 339 Gene3D G3DSA:3.90.640.10 182 255 5.0E-130 T 12-10-2018 N288_19050 4c11d0cf44f27ce065438806ff9e6960 339 Pfam PF06723 MreB/Mbl protein 7 330 1.2E-149 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_19050 4c11d0cf44f27ce065438806ff9e6960 339 Gene3D G3DSA:3.30.420.40 150 313 5.0E-130 T 12-10-2018 N288_19050 4c11d0cf44f27ce065438806ff9e6960 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 183 203 5.9E-61 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_19050 4c11d0cf44f27ce065438806ff9e6960 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 64 87 5.9E-61 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_19050 4c11d0cf44f27ce065438806ff9e6960 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 44 62 5.9E-61 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_19050 4c11d0cf44f27ce065438806ff9e6960 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 296 322 5.9E-61 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_19050 4c11d0cf44f27ce065438806ff9e6960 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 128 147 5.9E-61 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_19050 4c11d0cf44f27ce065438806ff9e6960 339 SUPERFAMILY SSF53067 8 143 2.07E-37 T 12-10-2018 N288_19050 4c11d0cf44f27ce065438806ff9e6960 339 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 7 332 5.5E-159 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 N288_19050 4c11d0cf44f27ce065438806ff9e6960 339 SUPERFAMILY SSF53067 146 328 1.87E-50 T 12-10-2018 N288_08375 8edf6963bdcf2b5f6b89b8bdc9bd6db8 248 Pfam PF12746 GNAT acetyltransferase 31 242 1.1E-37 T 12-10-2018 IPR027365 GNAT acetyltransferase YdfB-like N288_08375 8edf6963bdcf2b5f6b89b8bdc9bd6db8 248 SUPERFAMILY SSF55729 100 235 4.4E-13 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_08375 8edf6963bdcf2b5f6b89b8bdc9bd6db8 248 Gene3D G3DSA:3.40.630.30 112 233 6.0E-28 T 12-10-2018 N288_07190 92c317388144f85eb3332c6b29460da8 188 SUPERFAMILY SSF52499 8 187 3.14E-44 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 N288_07190 92c317388144f85eb3332c6b29460da8 188 Pfam PF00857 Isochorismatase family 9 180 1.5E-34 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 N288_07190 92c317388144f85eb3332c6b29460da8 188 Gene3D G3DSA:3.40.50.850 2 188 2.7E-50 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 N288_05370 d1334a105746ebc9c0063263c761582a 211 Gene3D G3DSA:2.40.30.170 113 211 7.1E-19 T 12-10-2018 N288_05370 d1334a105746ebc9c0063263c761582a 211 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 81 159 6.0E-13 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain N288_05370 d1334a105746ebc9c0063263c761582a 211 Gene3D G3DSA:2.40.50.100 40 112 2.1E-8 T 12-10-2018 N288_05370 d1334a105746ebc9c0063263c761582a 211 SUPERFAMILY SSF51230 40 113 2.22E-9 T 12-10-2018 IPR011053 Single hybrid motif N288_23215 6b8be3dec0a1b23986cacece9b3e6e3d 295 SUPERFAMILY SSF51735 1 294 8.0E-83 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_23215 6b8be3dec0a1b23986cacece9b3e6e3d 295 Gene3D G3DSA:3.90.25.10 194 295 3.2E-121 T 12-10-2018 N288_23215 6b8be3dec0a1b23986cacece9b3e6e3d 295 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 260 1.0E-52 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 N288_23215 6b8be3dec0a1b23986cacece9b3e6e3d 295 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 295 1.2E-117 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 N288_23215 6b8be3dec0a1b23986cacece9b3e6e3d 295 Gene3D G3DSA:3.40.50.720 4 272 3.2E-121 T 12-10-2018 N288_25240 8ef4151739d730cb40a59b8f06766745 187 Pfam PF11667 Putative zincin peptidase 66 166 2.8E-18 T 12-10-2018 IPR021683 Putative zincin peptidase N288_13865 1763f13237a3b287f90b827aff8badf5 161 Pfam PF14526 Integron-associated effector binding protein 10 156 9.8E-17 T 12-10-2018 IPR029441 Integron-associated effector binding protein N288_13865 1763f13237a3b287f90b827aff8badf5 161 SUPERFAMILY SSF55136 8 157 7.15E-17 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily N288_13865 1763f13237a3b287f90b827aff8badf5 161 SMART SM00871 7 161 2.4E-16 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding N288_13865 1763f13237a3b287f90b827aff8badf5 161 Gene3D G3DSA:3.20.80.10 8 161 1.5E-19 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily N288_07305 f8b66598a545a5dd6b510fdf5d7abe2b 310 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_07305 f8b66598a545a5dd6b510fdf5d7abe2b 310 Gene3D G3DSA:3.40.50.300 1 238 9.7E-70 T 12-10-2018 N288_07305 f8b66598a545a5dd6b510fdf5d7abe2b 310 Pfam PF13732 Domain of unknown function (DUF4162) 215 303 1.7E-6 T 12-10-2018 IPR025302 Domain of unknown function DUF4162 N288_07305 f8b66598a545a5dd6b510fdf5d7abe2b 310 SUPERFAMILY SSF52540 2 221 2.33E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_07305 f8b66598a545a5dd6b510fdf5d7abe2b 310 Pfam PF00005 ABC transporter 18 160 1.0E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_07305 f8b66598a545a5dd6b510fdf5d7abe2b 310 SMART SM00382 26 210 4.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_10545 7e4325486f3ce4c90853539165cf113f 101 SUPERFAMILY SSF52794 2 100 1.54E-34 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 N288_10545 7e4325486f3ce4c90853539165cf113f 101 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 1 94 2.1E-34 T 12-10-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 N288_10545 7e4325486f3ce4c90853539165cf113f 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 93 6.1E-20 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 N288_10545 7e4325486f3ce4c90853539165cf113f 101 Gene3D G3DSA:3.40.50.2300 1 101 1.5E-35 T 12-10-2018 N288_09585 29c1e45f1f3fc15c663033dcb9864f3f 128 Pfam PF11068 YlqD protein 2 128 4.7E-35 T 12-10-2018 IPR021297 YlqD protein N288_11175 e1ccc6b8bf188d7e8d048c0a982322d0 524 SUPERFAMILY SSF55073 355 514 1.73E-42 T 12-10-2018 IPR029787 Nucleotide cyclase N288_11175 e1ccc6b8bf188d7e8d048c0a982322d0 524 Gene3D G3DSA:3.30.70.270 345 518 6.1E-51 T 12-10-2018 N288_11175 e1ccc6b8bf188d7e8d048c0a982322d0 524 SUPERFAMILY SSF55785 245 348 6.46E-8 T 12-10-2018 IPR035965 PAS domain superfamily N288_11175 e1ccc6b8bf188d7e8d048c0a982322d0 524 Pfam PF16927 N-terminal 7TM region of histidine kinase 12 233 1.4E-45 T 12-10-2018 IPR031621 Histidine kinase, N-terminal 7TM region N288_11175 e1ccc6b8bf188d7e8d048c0a982322d0 524 Pfam PF00990 Diguanylate cyclase, GGDEF domain 350 511 9.3E-41 T 12-10-2018 IPR000160 GGDEF domain N288_11175 e1ccc6b8bf188d7e8d048c0a982322d0 524 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 346 513 2.6E-47 T 12-10-2018 IPR000160 GGDEF domain N288_11175 e1ccc6b8bf188d7e8d048c0a982322d0 524 SMART SM00267 339 515 3.1E-53 T 12-10-2018 IPR000160 GGDEF domain N288_11175 e1ccc6b8bf188d7e8d048c0a982322d0 524 Gene3D G3DSA:3.30.450.20 235 344 1.8E-9 T 12-10-2018 N288_17395 caade33a2cb13bd1646c41e599e5fe84 290 Pfam PF06207 Protein of unknown function (DUF1002) 36 253 1.1E-77 T 12-10-2018 IPR009343 Protein of unknown function DUF1002 N288_08205 948e27cf742a748e5278617d77ce083c 96 SUPERFAMILY SSF89957 2 96 1.7E-26 T 12-10-2018 IPR029756 MTH1187/YkoF-like N288_08205 948e27cf742a748e5278617d77ce083c 96 Pfam PF01910 Thiamine-binding protein 7 95 1.2E-25 T 12-10-2018 IPR002767 Thiamine-binding protein N288_08205 948e27cf742a748e5278617d77ce083c 96 Gene3D G3DSA:3.30.70.930 1 96 1.6E-30 T 12-10-2018 IPR029756 MTH1187/YkoF-like N288_16640 f227597a49087d8bf56e91a500f96920 191 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 75 164 7.6E-25 T 12-10-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 N288_16640 f227597a49087d8bf56e91a500f96920 191 Gene3D G3DSA:1.20.120.1630 1 182 9.0E-20 T 12-10-2018 N288_05605 99dff2c94f74b6cdfecf4676fb242b7d 41 Pfam PF14152 YfhE-like protein 2 37 1.6E-20 T 12-10-2018 IPR025437 YfhE-like protein N288_01720 fe0821bf5c1996b88c23c5fce6f43191 116 Pfam PF11127 Protein of unknown function (DUF2892) 4 65 7.3E-12 T 12-10-2018 IPR021309 Protein of unknown function DUF2892 N288_14175 2566490c49e55345d04c7d9567d5adf2 321 SUPERFAMILY SSF161098 73 302 4.97E-56 T 12-10-2018 IPR035906 MetI-like superfamily N288_14175 2566490c49e55345d04c7d9567d5adf2 321 Gene3D G3DSA:1.10.3720.10 69 312 6.8E-62 T 12-10-2018 IPR035906 MetI-like superfamily N288_14175 2566490c49e55345d04c7d9567d5adf2 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 309 1.9E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_06025 b7538a25c165ab7b2b3f7e5385433c10 215 Pfam PF07875 Coat F domain 122 183 1.8E-17 T 12-10-2018 IPR012851 Spore coat protein CotF-like N288_15570 6c0eca9ab1ba0e41160149795a228153 269 SUPERFAMILY SSF56281 8 246 5.05E-46 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_15570 6c0eca9ab1ba0e41160149795a228153 269 Pfam PF00753 Metallo-beta-lactamase superfamily 26 236 2.4E-32 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_15570 6c0eca9ab1ba0e41160149795a228153 269 Gene3D G3DSA:3.60.15.10 1 265 1.7E-43 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like N288_15570 6c0eca9ab1ba0e41160149795a228153 269 SMART SM00849 24 236 2.0E-30 T 12-10-2018 IPR001279 Metallo-beta-lactamase N288_17325 95d7dc133e715e7b185434152f39d279 176 Pfam PF07670 Nucleoside recognition 47 146 1.8E-5 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 N288_09785 b37da2d12d28c3dc7670b8a5eac051f1 260 Pfam PF01311 Bacterial export proteins, family 1 9 243 8.4E-73 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 N288_09785 b37da2d12d28c3dc7670b8a5eac051f1 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 10 251 3.2E-66 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 N288_09785 b37da2d12d28c3dc7670b8a5eac051f1 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 199 218 1.4E-27 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 N288_09785 b37da2d12d28c3dc7670b8a5eac051f1 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 74 93 1.4E-27 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 N288_09785 b37da2d12d28c3dc7670b8a5eac051f1 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 17 38 1.4E-27 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 N288_09785 b37da2d12d28c3dc7670b8a5eac051f1 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 177 199 1.4E-27 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 N288_19645 300a252ce8c96b671fdcfae591010009 325 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 50.565 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_19645 300a252ce8c96b671fdcfae591010009 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 1.0E-46 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_19645 300a252ce8c96b671fdcfae591010009 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 1.0E-46 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_19645 300a252ce8c96b671fdcfae591010009 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 1.0E-46 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_19645 300a252ce8c96b671fdcfae591010009 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 1.0E-46 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_19645 300a252ce8c96b671fdcfae591010009 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 1.0E-46 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_19645 300a252ce8c96b671fdcfae591010009 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 1.0E-46 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_19645 300a252ce8c96b671fdcfae591010009 325 Gene3D G3DSA:3.90.226.10 2 317 1.2E-125 T 12-10-2018 N288_19645 300a252ce8c96b671fdcfae591010009 325 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 147 5.9E-68 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_19645 300a252ce8c96b671fdcfae591010009 325 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 4 315 1.7E-159 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 N288_19645 300a252ce8c96b671fdcfae591010009 325 SUPERFAMILY SSF52096 6 315 2.99E-102 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily N288_23875 d77201b63bdd54191287cca6bf3fda45 320 SUPERFAMILY SSF56655 1 312 6.41E-111 T 12-10-2018 N288_23875 d77201b63bdd54191287cca6bf3fda45 320 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 309 3.7E-142 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 N288_23875 d77201b63bdd54191287cca6bf3fda45 320 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 319 2.0E-154 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 N288_23875 d77201b63bdd54191287cca6bf3fda45 320 Gene3D G3DSA:3.40.190.90 122 283 2.8E-133 T 12-10-2018 N288_23875 d77201b63bdd54191287cca6bf3fda45 320 Gene3D G3DSA:3.30.540.10 7 309 2.8E-133 T 12-10-2018 N288_23875 d77201b63bdd54191287cca6bf3fda45 320 PIRSF PIRSF004532 1 320 5.4E-150 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 N288_15110 aa781a57ebd5285c744710a7a062ccd1 291 Pfam PF10978 Protein of unknown function (DUF2785) 85 260 7.9E-55 T 12-10-2018 IPR021247 Protein of unknown function DUF2785 N288_22595 eca9bccb8f11ad9ee9179eb75e91ed1d 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 319 1.5E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_22595 eca9bccb8f11ad9ee9179eb75e91ed1d 325 Gene3D G3DSA:1.10.3720.10 77 325 2.8E-61 T 12-10-2018 IPR035906 MetI-like superfamily N288_22595 eca9bccb8f11ad9ee9179eb75e91ed1d 325 SUPERFAMILY SSF161098 81 311 3.66E-50 T 12-10-2018 IPR035906 MetI-like superfamily N288_15750 8d9d86e10ff2ac0f5319a0f5f11a894b 247 Gene3D G3DSA:3.40.50.1110 1 229 1.5E-41 T 12-10-2018 IPR036514 SGNH hydrolase superfamily N288_15750 8d9d86e10ff2ac0f5319a0f5f11a894b 247 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 5 218 3.4E-19 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain N288_15750 8d9d86e10ff2ac0f5319a0f5f11a894b 247 SUPERFAMILY SSF52266 1 228 4.73E-39 T 12-10-2018 N288_25605 df80774d78d1f6786c2db3e29f863eb9 231 SUPERFAMILY SSF52540 3 220 2.54E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_25605 df80774d78d1f6786c2db3e29f863eb9 231 SMART SM00382 32 218 3.7E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_25605 df80774d78d1f6786c2db3e29f863eb9 231 Gene3D G3DSA:3.40.50.300 1 230 1.3E-61 T 12-10-2018 N288_25605 df80774d78d1f6786c2db3e29f863eb9 231 Pfam PF00005 ABC transporter 23 169 8.5E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_25605 df80774d78d1f6786c2db3e29f863eb9 231 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_13980 6320acf44cfa41be1448a9667fe8bbff 155 SUPERFAMILY SSF52309 10 154 2.11E-44 T 12-10-2018 N288_13980 6320acf44cfa41be1448a9667fe8bbff 155 Gene3D G3DSA:3.40.50.450 4 154 5.5E-42 T 12-10-2018 N288_13980 6320acf44cfa41be1448a9667fe8bbff 155 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 12 117 2.9E-18 T 12-10-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase Reactome: R-HSA-74259 N288_23170 08619707eb0e12ccb23ac90ab4712fe2 309 Gene3D G3DSA:3.40.960.10 196 307 1.7E-7 T 12-10-2018 N288_08610 b3d1bc18ac8ed2039ccc7b4dcecc3fd1 424 Pfam PF05977 Transmembrane secretion effector 5 415 3.2E-25 T 12-10-2018 IPR010290 Transmembrane secretion effector N288_08610 b3d1bc18ac8ed2039ccc7b4dcecc3fd1 424 Gene3D G3DSA:1.20.1250.20 6 410 5.7E-39 T 12-10-2018 N288_08610 b3d1bc18ac8ed2039ccc7b4dcecc3fd1 424 SUPERFAMILY SSF103473 10 412 8.76E-43 T 12-10-2018 IPR036259 MFS transporter superfamily N288_11975 6f9e621bc193dcb2d492f86e8228bb7f 296 Pfam PF00795 Carbon-nitrogen hydrolase 7 274 5.3E-59 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 N288_11975 6f9e621bc193dcb2d492f86e8228bb7f 296 SUPERFAMILY SSF56317 4 291 7.98E-76 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily N288_11975 6f9e621bc193dcb2d492f86e8228bb7f 296 Gene3D G3DSA:3.60.110.10 2 294 4.9E-109 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily N288_11370 982ede115004457228b5b20a62f15bd4 295 Gene3D G3DSA:3.90.550.10 1 293 2.5E-84 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_11370 982ede115004457228b5b20a62f15bd4 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 4.4E-147 T 12-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 N288_11370 982ede115004457228b5b20a62f15bd4 295 Pfam PF00483 Nucleotidyl transferase 2 238 4.5E-70 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 N288_11370 982ede115004457228b5b20a62f15bd4 295 SUPERFAMILY SSF53448 1 286 9.46E-88 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_09885 4263f35d7b242a054f74adb134f5be45 265 Pfam PF01148 Cytidylyltransferase family 2 261 1.8E-70 T 12-10-2018 N288_09885 4263f35d7b242a054f74adb134f5be45 265 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 223 249 - T 12-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 N288_07245 670cc025dd6d16b871c133ab7fe6ffbb 76 ProDom PD027559 GERMINATION SPORE GERPB PROBABLE PB SPORULATION PB-RELATED 19 56 3.0E-6 T 12-10-2018 IPR024255 Spore germination GerPB N288_07245 670cc025dd6d16b871c133ab7fe6ffbb 76 Pfam PF10803 Spore germination GerPB 1 52 1.8E-30 T 12-10-2018 IPR024255 Spore germination GerPB N288_07760 4d7af6bb7017f7ebaf72874af9c8a0dc 165 Pfam PF10612 Spore coat protein Z 1 158 8.9E-53 T 12-10-2018 IPR019593 Spore coat protein Z/Y N288_24690 03c8ae8fdbe29984d5f5b3265f547409 389 Pfam PF01757 Acyltransferase family 12 353 2.8E-27 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 N288_10520 68cf07c5f6f728c41f4a05d9f7e5bb13 295 Gene3D G3DSA:1.10.3720.10 17 286 1.5E-55 T 12-10-2018 IPR035906 MetI-like superfamily N288_10520 68cf07c5f6f728c41f4a05d9f7e5bb13 295 SUPERFAMILY SSF161098 23 295 4.11E-66 T 12-10-2018 IPR035906 MetI-like superfamily N288_10520 68cf07c5f6f728c41f4a05d9f7e5bb13 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 288 3.3E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_19825 e27ddfe52872d3b01bf27cf39082a3d9 441 Pfam PF05525 Branched-chain amino acid transport protein 8 433 2.2E-155 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 N288_19825 e27ddfe52872d3b01bf27cf39082a3d9 441 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 15 421 5.1E-147 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 N288_03800 e83da01e12a8f52b36ba4495bd22b4cd 128 Gene3D G3DSA:3.30.300.20 3 126 7.4E-30 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta N288_03800 e83da01e12a8f52b36ba4495bd22b4cd 128 SUPERFAMILY SSF82784 20 126 2.36E-26 T 12-10-2018 IPR036102 OsmC/Ohr superfamily N288_03800 e83da01e12a8f52b36ba4495bd22b4cd 128 Pfam PF02566 OsmC-like protein 26 120 3.7E-20 T 12-10-2018 IPR003718 OsmC/Ohr family N288_16435 ab7b2ec76f4ffb526f5e1400c09df096 274 Pfam PF04445 Putative SAM-dependent methyltransferase 64 249 1.4E-12 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 N288_16435 ab7b2ec76f4ffb526f5e1400c09df096 274 Gene3D G3DSA:3.40.50.150 84 272 9.6E-36 T 12-10-2018 N288_16435 ab7b2ec76f4ffb526f5e1400c09df096 274 SUPERFAMILY SSF53335 19 271 3.59E-50 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_18025 659dda662e099b25d6d6ddba48eeea2a 160 Pfam PF15980 Putative Competence protein ComGF 56 143 1.2E-16 T 12-10-2018 IPR016977 Competence operon G, ComGF N288_10515 57dc1ac5032fb9d183842883020099a6 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 283 2.0E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_10515 57dc1ac5032fb9d183842883020099a6 294 Gene3D G3DSA:1.10.3720.10 48 293 4.8E-65 T 12-10-2018 IPR035906 MetI-like superfamily N288_10515 57dc1ac5032fb9d183842883020099a6 294 SUPERFAMILY SSF161098 53 282 2.49E-53 T 12-10-2018 IPR035906 MetI-like superfamily N288_11040 e6a147cb791cce5848c877c135068012 240 Gene3D G3DSA:3.30.460.10 1 118 1.2E-9 T 12-10-2018 N288_11040 e6a147cb791cce5848c877c135068012 240 SUPERFAMILY SSF81301 3 110 1.22E-10 T 12-10-2018 N288_14600 f4e0408c41764f36e1d61f97076d47fc 209 Pfam PF11193 Protein of unknown function (DUF2812) 9 119 7.4E-29 T 12-10-2018 IPR021359 Protein of unknown function DUF2812 N288_21465 704bc51b33c33de17c696f5d23b4b659 402 Pfam PF12698 ABC-2 family transporter protein 19 371 7.6E-28 T 12-10-2018 N288_02795 dbad271783beea9fcb3563360602accf 399 Gene3D G3DSA:1.20.1250.20 6 384 3.1E-54 T 12-10-2018 N288_02795 dbad271783beea9fcb3563360602accf 399 SUPERFAMILY SSF103473 5 392 3.4E-62 T 12-10-2018 IPR036259 MFS transporter superfamily N288_02795 dbad271783beea9fcb3563360602accf 399 Pfam PF07690 Major Facilitator Superfamily 17 250 1.0E-27 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_02795 dbad271783beea9fcb3563360602accf 399 Pfam PF07690 Major Facilitator Superfamily 254 384 1.0E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_22535 4f1d62da44c926e9b127a6e86f2d485e 88 Pfam PF01476 LysM domain 42 82 1.3E-15 T 12-10-2018 IPR018392 LysM domain N288_22535 4f1d62da44c926e9b127a6e86f2d485e 88 Gene3D G3DSA:3.10.350.10 40 84 4.0E-18 T 12-10-2018 IPR036779 LysM domain superfamily N288_22535 4f1d62da44c926e9b127a6e86f2d485e 88 SUPERFAMILY SSF54106 40 83 1.06E-12 T 12-10-2018 N288_22535 4f1d62da44c926e9b127a6e86f2d485e 88 SMART SM00257 41 85 3.7E-13 T 12-10-2018 IPR018392 LysM domain N288_04275 baf6c2c0833027f713daf6ccd893eb1e 408 Pfam PF05684 Protein of unknown function (DUF819) 16 405 1.7E-104 T 12-10-2018 IPR008537 Protein of unknown function DUF819 N288_15005 3eb9caaa8dea813873b2e13d7cb41844 271 Gene3D G3DSA:3.60.21.10 44 246 4.5E-26 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like N288_15005 3eb9caaa8dea813873b2e13d7cb41844 271 SUPERFAMILY SSF56300 46 270 8.16E-34 T 12-10-2018 N288_15005 3eb9caaa8dea813873b2e13d7cb41844 271 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 47 210 4.1E-12 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 N288_06940 b77171c5dbda2dfb368892a19a8e474d 259 Gene3D G3DSA:3.20.20.370 24 248 2.9E-73 T 12-10-2018 N288_06940 b77171c5dbda2dfb368892a19a8e474d 259 SUPERFAMILY SSF88713 28 247 8.45E-65 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 N288_06940 b77171c5dbda2dfb368892a19a8e474d 259 Pfam PF04748 Divergent polysaccharide deacetylase 31 246 1.1E-67 T 12-10-2018 IPR006837 Divergent polysaccharide deacetylase N288_04835 bd59c0feba31dae2c4ad6c549d195ecf 153 ProDom PD091678 YNCE 3 146 3.0E-32 T 12-10-2018 IPR020216 Uncharacterised protein family, YncE N288_04835 bd59c0feba31dae2c4ad6c549d195ecf 153 Pfam PF10903 Protein of unknown function (DUF2691) 3 150 7.2E-66 T 12-10-2018 IPR020216 Uncharacterised protein family, YncE N288_14505 853dab99cb0434f1b84d4054d0964d19 626 Pfam PF02687 FtsX-like permease family 84 176 4.1E-8 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 N288_14505 853dab99cb0434f1b84d4054d0964d19 626 PIRSF PIRSF018968 1 625 1.6E-131 T 12-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 N288_07690 a0f2ef9ae22c3a60d1ece742fa812457 292 SUPERFAMILY SSF52833 23 226 6.26E-31 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_07690 a0f2ef9ae22c3a60d1ece742fa812457 292 Gene3D G3DSA:1.10.472.60 64 188 1.8E-34 T 12-10-2018 N288_07690 a0f2ef9ae22c3a60d1ece742fa812457 292 Pfam PF13743 Thioredoxin 27 219 6.4E-79 T 12-10-2018 N288_07690 a0f2ef9ae22c3a60d1ece742fa812457 292 Gene3D G3DSA:3.40.30.10 29 217 1.8E-34 T 12-10-2018 N288_11440 15d8e6db97d12ff96f0a8c246cc266bf 247 Pfam PF00535 Glycosyl transferase family 2 15 168 4.5E-28 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 N288_11440 15d8e6db97d12ff96f0a8c246cc266bf 247 SUPERFAMILY SSF53448 13 222 2.75E-52 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_11440 15d8e6db97d12ff96f0a8c246cc266bf 247 Gene3D G3DSA:3.90.550.10 1 241 9.8E-58 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_09285 1e4dc709bed3e43ff20c9749a93036a2 257 Gene3D G3DSA:3.10.290.10 180 233 2.0E-6 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 N288_09285 1e4dc709bed3e43ff20c9749a93036a2 257 Gene3D G3DSA:3.30.70.330 80 166 1.4E-30 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily N288_09285 1e4dc709bed3e43ff20c9749a93036a2 257 Gene3D G3DSA:3.30.1370.160 2 79 2.8E-30 T 12-10-2018 N288_09285 1e4dc709bed3e43ff20c9749a93036a2 257 Pfam PF01479 S4 domain 182 226 4.2E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_09285 1e4dc709bed3e43ff20c9749a93036a2 257 SMART SM00363 181 243 3.6E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 N288_09285 1e4dc709bed3e43ff20c9749a93036a2 257 SUPERFAMILY SSF55174 35 252 1.7E-35 T 12-10-2018 N288_12360 a75c4acc66f4d4491216dfed7c59939e 192 Pfam PF02632 BioY family 33 171 3.5E-36 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 N288_12360 a75c4acc66f4d4491216dfed7c59939e 192 Gene3D G3DSA:1.10.1760.20 1 180 3.1E-50 T 12-10-2018 N288_12360 a75c4acc66f4d4491216dfed7c59939e 192 PIRSF PIRSF016661 1 181 6.2E-48 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 N288_18580 1fe3daf75dee61d67d084df83927213b 96 Gene3D G3DSA:3.30.110.60 1 96 1.5E-38 T 12-10-2018 IPR035920 YhbY-like superfamily N288_18580 1fe3daf75dee61d67d084df83927213b 96 SMART SM01103 2 85 1.3E-42 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 N288_18580 1fe3daf75dee61d67d084df83927213b 96 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 2 96 5.5E-43 T 12-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 N288_18580 1fe3daf75dee61d67d084df83927213b 96 SUPERFAMILY SSF75471 1 95 1.03E-32 T 12-10-2018 IPR035920 YhbY-like superfamily N288_18580 1fe3daf75dee61d67d084df83927213b 96 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 8 96 6.0E-37 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 N288_18580 1fe3daf75dee61d67d084df83927213b 96 Pfam PF01985 CRS1 / YhbY (CRM) domain 2 85 3.4E-23 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 N288_25320 8bb1509a49b3da2c8c6d09480e6d0ac3 156 Pfam PF12867 DinB superfamily 25 142 5.6E-6 T 12-10-2018 IPR024775 DinB-like domain N288_25320 8bb1509a49b3da2c8c6d09480e6d0ac3 156 Gene3D G3DSA:1.20.120.450 14 150 1.7E-10 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_25320 8bb1509a49b3da2c8c6d09480e6d0ac3 156 SUPERFAMILY SSF109854 20 153 1.79E-15 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_20380 d9392b54cccfbacb4d65a1d399f7c59c 349 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 6 333 1.4E-32 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 N288_07960 785f883d8e882dcc08d29e408984a051 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 317 8.2E-30 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_07960 785f883d8e882dcc08d29e408984a051 317 Gene3D G3DSA:1.10.3720.10 103 317 4.8E-21 T 12-10-2018 IPR035906 MetI-like superfamily N288_07960 785f883d8e882dcc08d29e408984a051 317 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 39 91 9.9E-20 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain N288_07960 785f883d8e882dcc08d29e408984a051 317 SUPERFAMILY SSF161098 109 316 2.88E-26 T 12-10-2018 IPR035906 MetI-like superfamily N288_23785 1c7e71100242f0ae4e87de56429f949d 171 Gene3D G3DSA:3.90.1720.10 39 171 3.7E-37 T 12-10-2018 N288_23785 1c7e71100242f0ae4e87de56429f949d 171 SUPERFAMILY SSF54001 55 171 8.83E-33 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily N288_23785 1c7e71100242f0ae4e87de56429f949d 171 Pfam PF00877 NlpC/P60 family 64 168 1.7E-26 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain N288_04805 455957e50fc63fa4c2a089d3d6f849ae 342 Pfam PF00487 Fatty acid desaturase 53 293 1.3E-34 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 N288_10340 7e4961a8650dabe6af1b3381d6a459ef 110 Pfam PF01476 LysM domain 41 90 5.5E-6 T 12-10-2018 IPR018392 LysM domain N288_10340 7e4961a8650dabe6af1b3381d6a459ef 110 Gene3D G3DSA:3.10.350.10 33 102 5.8E-8 T 12-10-2018 IPR036779 LysM domain superfamily N288_14345 2321299a461ae68c41633ef90f14912e 148 SUPERFAMILY SSF55961 1 138 8.1E-21 T 12-10-2018 N288_14345 2321299a461ae68c41633ef90f14912e 148 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 136 1.8E-10 T 12-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like N288_14345 2321299a461ae68c41633ef90f14912e 148 Gene3D G3DSA:3.30.530.20 1 146 3.3E-25 T 12-10-2018 IPR023393 START-like domain superfamily N288_02225 e794d10a7af58383b45f197d84771f47 292 Pfam PF01435 Peptidase family M48 85 291 8.5E-38 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 N288_02225 e794d10a7af58383b45f197d84771f47 292 Gene3D G3DSA:3.30.2010.10 77 168 2.6E-31 T 12-10-2018 N288_05905 d20954eda92c559767f527b93fd6059e 427 SUPERFAMILY SSF53850 19 426 1.55E-68 T 12-10-2018 N288_05905 d20954eda92c559767f527b93fd6059e 427 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 148 165 - T 12-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 N288_05905 d20954eda92c559767f527b93fd6059e 427 Pfam PF13416 Bacterial extracellular solute-binding protein 60 364 1.1E-41 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein N288_05905 d20954eda92c559767f527b93fd6059e 427 Gene3D G3DSA:3.40.190.10 152 408 7.8E-90 T 12-10-2018 N288_05905 d20954eda92c559767f527b93fd6059e 427 Gene3D G3DSA:3.40.190.10 56 365 7.8E-90 T 12-10-2018 N288_24935 ecea46bf52e70981ab6dd4e205055f11 152 SUPERFAMILY SSF118196 1 151 1.96E-45 T 12-10-2018 IPR036413 YaeB-like superfamily N288_24935 ecea46bf52e70981ab6dd4e205055f11 152 Gene3D G3DSA:2.40.30.70 2 132 6.7E-33 T 12-10-2018 IPR036414 YaeB, N-terminal domain superfamily N288_24935 ecea46bf52e70981ab6dd4e205055f11 152 Pfam PF01980 Uncharacterised protein family UPF0066 24 130 1.2E-30 T 12-10-2018 IPR023370 YaeB-like, N-terminal domain N288_08915 b13b61075ff41f9715bc6ac244473ac0 195 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 29 150 2.8E-15 T 12-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like N288_08915 b13b61075ff41f9715bc6ac244473ac0 195 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 9 152 6.1E-36 T 12-10-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 N288_17140 7fac7d63f9eb9254ce35f29a2a7cb016 59 Pfam PF17313 Family of unknown function (DUF5359) 1 56 9.3E-23 T 12-10-2018 IPR035281 Protein of unknown function DUF5359 N288_13285 28ae233a48f5491a731926f66a1a9f9a 359 Pfam PF01384 Phosphate transporter family 17 308 6.0E-47 T 12-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 N288_24125 744f2efeebdda339a14afe374bfe477f 235 Pfam PF12730 ABC-2 family transporter protein 5 183 2.3E-18 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 N288_22850 bf06def0f54c82517182204bff7aad41 291 SUPERFAMILY SSF161098 21 291 1.21E-73 T 12-10-2018 IPR035906 MetI-like superfamily N288_22850 bf06def0f54c82517182204bff7aad41 291 Gene3D G3DSA:1.10.3720.10 14 278 5.5E-67 T 12-10-2018 IPR035906 MetI-like superfamily N288_22850 bf06def0f54c82517182204bff7aad41 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 276 1.2E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_03165 9b5db03f483a4ab1eefffaba34511701 377 SUPERFAMILY SSF50129 1 176 2.28E-62 T 12-10-2018 IPR011032 GroES-like superfamily N288_03165 9b5db03f483a4ab1eefffaba34511701 377 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 1.9E-12 T 12-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated N288_03165 9b5db03f483a4ab1eefffaba34511701 377 Gene3D G3DSA:3.90.180.10 4 364 2.7E-129 T 12-10-2018 N288_03165 9b5db03f483a4ab1eefffaba34511701 377 SUPERFAMILY SSF51735 154 338 6.57E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_03165 9b5db03f483a4ab1eefffaba34511701 377 Gene3D G3DSA:3.40.50.720 168 337 2.7E-129 T 12-10-2018 N288_03165 9b5db03f483a4ab1eefffaba34511701 377 Pfam PF00107 Zinc-binding dehydrogenase 188 255 1.8E-9 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 N288_03165 9b5db03f483a4ab1eefffaba34511701 377 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 142 1.9E-31 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 N288_03165 9b5db03f483a4ab1eefffaba34511701 377 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 N288_01880 2d7bb06f98683e9f6ce88829d593cb48 54 Pfam PF13070 Protein of unknown function (DUF3934) 1 41 1.8E-16 T 12-10-2018 IPR025175 Protein of unknown function DUF3934 N288_04720 baa54d450b4c8083ab30d6c3dea78bf1 182 Pfam PF10069 Sensory domain in DIguanylate Cyclases and Two-component system 41 138 3.0E-13 T 12-10-2018 IPR019278 DICT domain N288_06505 7668b7cd2f605a65f2faee14b8e4774f 171 Pfam PF00582 Universal stress protein family 4 171 1.1E-28 T 12-10-2018 IPR006016 UspA N288_06505 7668b7cd2f605a65f2faee14b8e4774f 171 SUPERFAMILY SSF52402 3 171 1.93E-28 T 12-10-2018 N288_06505 7668b7cd2f605a65f2faee14b8e4774f 171 PRINTS PR01438 Universal stress protein signature 4 22 2.5E-18 T 12-10-2018 IPR006015 Universal stress protein A N288_06505 7668b7cd2f605a65f2faee14b8e4774f 171 PRINTS PR01438 Universal stress protein signature 149 171 2.5E-18 T 12-10-2018 IPR006015 Universal stress protein A N288_06505 7668b7cd2f605a65f2faee14b8e4774f 171 PRINTS PR01438 Universal stress protein signature 131 143 2.5E-18 T 12-10-2018 IPR006015 Universal stress protein A N288_06505 7668b7cd2f605a65f2faee14b8e4774f 171 Gene3D G3DSA:3.40.50.620 2 171 5.3E-35 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold N288_23675 391f7eaf55027df5f30e9b5c89a545c2 470 Gene3D G3DSA:3.30.460.80 296 447 5.7E-32 T 12-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23675 391f7eaf55027df5f30e9b5c89a545c2 470 SUPERFAMILY SSF143243 325 467 6.15E-38 T 12-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23675 391f7eaf55027df5f30e9b5c89a545c2 470 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 401 448 2.0E-15 T 12-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23675 391f7eaf55027df5f30e9b5c89a545c2 470 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 351 464 4.8E-36 T 12-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_15120 8cb7d5c377933fd50bd05a538b5983c2 369 Pfam PF01594 AI-2E family transporter 18 349 1.5E-79 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like N288_01295 12c5fa3afea3355effa6f4c8379a5245 321 Pfam PF03186 CobD/Cbib protein 9 295 2.2E-102 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 N288_01295 12c5fa3afea3355effa6f4c8379a5245 321 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 321 98.087 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 N288_01295 12c5fa3afea3355effa6f4c8379a5245 321 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 8 304 4.3E-83 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 N288_14135 ad4a121b1c25d2f2c938be5a7af8fa4c 407 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 393 7.4E-125 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 N288_14135 ad4a121b1c25d2f2c938be5a7af8fa4c 407 Gene3D G3DSA:1.20.1720.10 13 393 2.4E-97 T 12-10-2018 N288_14135 ad4a121b1c25d2f2c938be5a7af8fa4c 407 Pfam PF07690 Major Facilitator Superfamily 20 361 1.2E-38 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_14135 ad4a121b1c25d2f2c938be5a7af8fa4c 407 SUPERFAMILY SSF103473 4 397 6.54E-58 T 12-10-2018 IPR036259 MFS transporter superfamily N288_14025 2c28b6dd281271785aeffbf0fb8d41e4 184 Pfam PF13671 AAA domain 5 147 1.1E-9 T 12-10-2018 N288_14025 2c28b6dd281271785aeffbf0fb8d41e4 184 SUPERFAMILY SSF52540 4 179 3.05E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_14025 2c28b6dd281271785aeffbf0fb8d41e4 184 Gene3D G3DSA:3.40.50.300 3 182 4.6E-10 T 12-10-2018 N288_11160 f3d02d721ddc853753d2bdeb2487338d 152 Gene3D G3DSA:3.30.530.20 2 151 4.2E-12 T 12-10-2018 IPR023393 START-like domain superfamily N288_11160 f3d02d721ddc853753d2bdeb2487338d 152 SUPERFAMILY SSF55961 1 136 1.34E-20 T 12-10-2018 N288_20175 0be772c38205aa8daf7992c9762722c7 87 Pfam PF10732 Protein of unknown function (DUF2524) 1 84 1.0E-37 T 12-10-2018 IPR019668 Uncharacterised protein family YtzC N288_18140 e4d27d8862d32d3a02471a871a3750ad 511 Gene3D G3DSA:1.25.40.10 383 509 3.3E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_18140 e4d27d8862d32d3a02471a871a3750ad 511 SUPERFAMILY SSF48452 394 502 1.61E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 N288_18140 e4d27d8862d32d3a02471a871a3750ad 511 SUPERFAMILY SSF144091 175 359 4.97E-44 T 12-10-2018 N288_18140 e4d27d8862d32d3a02471a871a3750ad 511 Pfam PF01694 Rhomboid family 219 354 7.8E-34 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 N288_18140 e4d27d8862d32d3a02471a871a3750ad 511 Gene3D G3DSA:1.20.1540.10 170 382 1.1E-47 T 12-10-2018 IPR035952 Rhomboid-like superfamily N288_24725 095c0908adbed559d0bd67e5a934c762 431 PIRSF PIRSF006066 4 431 2.1E-154 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 N288_24725 095c0908adbed559d0bd67e5a934c762 431 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 426 1.1E-131 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 N288_24725 095c0908adbed559d0bd67e5a934c762 431 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 421 4.5E-119 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit N288_20040 798f178f3b1103c2ad09a16c586b3e63 259 Pfam PF01636 Phosphotransferase enzyme family 14 214 4.0E-24 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase N288_20040 798f178f3b1103c2ad09a16c586b3e63 259 Gene3D G3DSA:3.90.1200.10 77 255 5.2E-20 T 12-10-2018 N288_20040 798f178f3b1103c2ad09a16c586b3e63 259 SUPERFAMILY SSF56112 2 227 6.01E-32 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_21335 0afd9d1f026d1fc31eb0c3f570919151 190 Gene3D G3DSA:3.40.630.30 1 182 4.8E-32 T 12-10-2018 N288_21335 0afd9d1f026d1fc31eb0c3f570919151 190 Pfam PF13302 Acetyltransferase (GNAT) domain 8 147 1.1E-17 T 12-10-2018 IPR000182 GNAT domain N288_21335 0afd9d1f026d1fc31eb0c3f570919151 190 SUPERFAMILY SSF55729 2 172 3.6E-30 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_09535 539a4cb0ba0abeb469511ebf0115dec0 279 Pfam PF12679 ABC-2 family transporter protein 76 265 1.6E-9 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 N288_00195 082966595e764e01a96f7bb0db3269e2 67 Pfam PF10764 Inhibitor of sigma-G Gin 14 58 3.6E-20 T 12-10-2018 IPR019700 Anti-sigma-G factor Gin N288_10445 d52dd54a76c2d76e2947059d134c77c1 364 Gene3D G3DSA:2.120.10.30 9 359 9.0E-121 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like N288_10445 d52dd54a76c2d76e2947059d134c77c1 364 SUPERFAMILY SSF101898 19 328 1.8E-22 T 12-10-2018 N288_10445 d52dd54a76c2d76e2947059d134c77c1 364 Pfam PF03022 Major royal jelly protein 80 339 8.9E-37 T 12-10-2018 IPR017996 Major royal jelly protein/protein yellow N288_11420 3a7bd9bde836b225ec751bda1fc6b5bb 280 SUPERFAMILY SSF57997 8 178 7.19E-5 T 12-10-2018 N288_17515 b19e76e533569a49db25db1920145c17 81 Pfam PF13025 Protein of unknown function (DUF3886) 12 79 1.9E-25 T 12-10-2018 IPR024980 Protein of unknown function DUF3886 N288_24225 44b5a497c359a7de4d58154d97c4b5eb 255 SUPERFAMILY SSF46955 5 124 1.28E-26 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily N288_24225 44b5a497c359a7de4d58154d97c4b5eb 255 Gene3D G3DSA:1.10.1660.10 3 137 5.7E-33 T 12-10-2018 N288_24225 44b5a497c359a7de4d58154d97c4b5eb 255 Pfam PF13411 MerR HTH family regulatory protein 5 73 9.7E-20 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_24225 44b5a497c359a7de4d58154d97c4b5eb 255 SMART SM00422 5 74 6.8E-21 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 N288_05745 df580d0d0fd9b2a4bb1864c2c104ff55 261 Pfam PF06182 ABC-2 family transporter protein 33 260 1.3E-53 T 12-10-2018 IPR010390 Protein of unknown function DUF990 N288_04020 fd05d4ee18742cbbcbf7066294fc674f 306 Pfam PF13930 DNA/RNA non-specific endonuclease 104 218 5.5E-7 T 12-10-2018 N288_04510 09e4648dabc57db31d5bbe0c5e12fe94 91 Gene3D G3DSA:3.30.360.10 2 89 6.1E-7 T 12-10-2018 N288_10220 5cfc30c97a01b7ffd38f0cee623a4ee4 179 SUPERFAMILY SSF81301 12 172 8.17E-38 T 12-10-2018 N288_10220 5cfc30c97a01b7ffd38f0cee623a4ee4 179 Gene3D G3DSA:3.30.460.10 6 176 1.5E-38 T 12-10-2018 N288_10220 5cfc30c97a01b7ffd38f0cee623a4ee4 179 Pfam PF04229 GrpB protein 10 172 9.5E-39 T 12-10-2018 IPR007344 GrpB/Dephospho-CoA kinase N288_11670 a0490105467aec2384df0eadb313c8d1 47 Hamap MF_00666 Small, acid-soluble spore protein P [sspP]. 1 47 18.215 T 12-10-2018 IPR012614 Small acid-soluble spore protein, SspP GO:0030435 N288_11670 a0490105467aec2384df0eadb313c8d1 47 Pfam PF08179 Small acid-soluble spore protein P family 1 42 8.4E-22 T 12-10-2018 IPR012614 Small acid-soluble spore protein, SspP GO:0030435 N288_09680 7d6a477fbb5498520bf27551dce1256a 132 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 4 129 7.3E-36 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 N288_09680 7d6a477fbb5498520bf27551dce1256a 132 PIRSF PIRSF002889 2 131 3.2E-34 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 N288_09680 7d6a477fbb5498520bf27551dce1256a 132 Pfam PF00460 Flagella basal body rod protein 9 38 2.4E-8 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 N288_22180 184e7f01c853ac1f5600f96a73ea3ac1 481 PIRSF PIRSF500217 1 481 3.7E-143 T 12-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 N288_22180 184e7f01c853ac1f5600f96a73ea3ac1 481 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 65 375 5.7E-29 T 12-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT N288_22180 184e7f01c853ac1f5600f96a73ea3ac1 481 PIRSF PIRSF016636 1 481 7.6E-146 T 12-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB N288_16420 bdeb85add82a2f941c60e74ac2947fed 193 Gene3D G3DSA:2.60.60.30 19 187 1.3E-69 T 12-10-2018 N288_16420 bdeb85add82a2f941c60e74ac2947fed 193 Pfam PF02342 TerD domain 1 188 2.5E-83 T 12-10-2018 IPR003325 TerD domain N288_06090 c25bfae7f57fb1c6cbf071745eb2a141 193 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 5 180 3.4E-37 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT N288_09130 256919a46083d592f62cc0d4c997665e 131 Pfam PF11877 Protein of unknown function (DUF3397) 10 119 3.9E-30 T 12-10-2018 IPR024515 Protein of unknown function DUF3397 N288_09130 256919a46083d592f62cc0d4c997665e 131 PIRSF PIRSF030092 1 128 8.1E-30 T 12-10-2018 IPR016945 Uncharacterised conserved protein UCP030092 N288_12640 a87d52eab0d7da3415ab75d2da9c0798 146 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 N288_12640 a87d52eab0d7da3415ab75d2da9c0798 146 Pfam PF00293 NUDIX domain 12 126 5.7E-10 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 N288_12640 a87d52eab0d7da3415ab75d2da9c0798 146 Gene3D G3DSA:3.90.79.10 3 145 1.5E-22 T 12-10-2018 N288_12640 a87d52eab0d7da3415ab75d2da9c0798 146 SUPERFAMILY SSF55811 3 128 1.34E-18 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 N288_21150 922cbd2ac8d10e39d3e7c1b4a2e13844 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 222 5.9E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_21150 922cbd2ac8d10e39d3e7c1b4a2e13844 222 Gene3D G3DSA:1.10.3720.10 10 222 4.7E-48 T 12-10-2018 IPR035906 MetI-like superfamily N288_21150 922cbd2ac8d10e39d3e7c1b4a2e13844 222 SUPERFAMILY SSF161098 11 209 9.03E-46 T 12-10-2018 IPR035906 MetI-like superfamily N288_05060 f4c53289cc4d31f92e8dad0f9ea9e0d3 485 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 13 454 1.0E-117 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 N288_05060 f4c53289cc4d31f92e8dad0f9ea9e0d3 485 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 7 471 44.921 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 N288_20895 ae27c87c93cff5242b9dc55ce6f84afe 107 Pfam PF14068 Putative membrane protein 8 107 1.3E-42 T 12-10-2018 IPR025917 Putative membrane protein YuiB N288_14380 e23527e5a1105178c5deeed6699faa37 330 Pfam PF09323 Domain of unknown function (DUF1980) 9 233 8.9E-52 T 12-10-2018 IPR015402 Protein of unknown function DUF1980 N288_14380 e23527e5a1105178c5deeed6699faa37 330 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 26 321 4.0E-52 T 12-10-2018 IPR015402 Protein of unknown function DUF1980 N288_24010 5ed468fb315e994b9863552e31a73fd4 223 Pfam PF02163 Peptidase family M50 122 189 1.9E-8 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 N288_14715 4a7279509227cd5e9904ccf4cd32845b 196 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 14 193 1.8E-35 T 12-10-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 N288_14715 4a7279509227cd5e9904ccf4cd32845b 196 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 14 192 1.2E-30 T 12-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like N288_05075 ccdc59c60d01489a0e04e9c4c1a71ad4 424 Pfam PF02447 GntP family permease 12 417 6.6E-18 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 N288_20165 3a7df620dbbe82b737f8ac0b98899cdf 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 1.1E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_20165 3a7df620dbbe82b737f8ac0b98899cdf 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 209 223 1.1E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_20165 3a7df620dbbe82b737f8ac0b98899cdf 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 102 1.1E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_20165 3a7df620dbbe82b737f8ac0b98899cdf 267 Gene3D G3DSA:3.40.50.1820 4 264 1.7E-53 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_20165 3a7df620dbbe82b737f8ac0b98899cdf 267 Pfam PF12697 Alpha/beta hydrolase family 23 256 2.1E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 N288_20165 3a7df620dbbe82b737f8ac0b98899cdf 267 SUPERFAMILY SSF53474 8 265 4.4E-52 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_16325 69a10c31fe840af800d1d3a0cf2179c9 83 Pfam PF10751 Protein of unknown function (DUF2535) 1 83 2.5E-40 T 12-10-2018 IPR019687 Protein of unknown function DUF2535 N288_24685 b9604407771b8a68d68eda74f997cb5e 183 SUPERFAMILY SSF55729 9 178 1.7E-46 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_24685 b9604407771b8a68d68eda74f997cb5e 183 Pfam PF13302 Acetyltransferase (GNAT) domain 14 154 3.9E-33 T 12-10-2018 IPR000182 GNAT domain N288_24685 b9604407771b8a68d68eda74f997cb5e 183 Gene3D G3DSA:3.40.630.30 4 179 3.6E-47 T 12-10-2018 N288_02120 44549d4c7e45a2308c7d36b57f6586bf 104 Pfam PF14145 YrhK-like protein 27 82 1.5E-15 T 12-10-2018 IPR025424 YrhK domain N288_02120 44549d4c7e45a2308c7d36b57f6586bf 104 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 9 86 2.0E-9 T 12-10-2018 N288_06485 89a67e0334c6189f8877806a8941c03d 345 SUPERFAMILY SSF52091 223 329 6.08E-6 T 12-10-2018 IPR036513 STAS domain superfamily N288_06485 89a67e0334c6189f8877806a8941c03d 345 Gene3D G3DSA:3.30.750.24 222 341 1.5E-26 T 12-10-2018 IPR036513 STAS domain superfamily N288_22380 814104fa665ed3c020c92158b60a0a4d 278 Gene3D G3DSA:1.10.3720.10 1 266 8.4E-55 T 12-10-2018 IPR035906 MetI-like superfamily N288_22380 814104fa665ed3c020c92158b60a0a4d 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 264 7.7E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_22380 814104fa665ed3c020c92158b60a0a4d 278 SUPERFAMILY SSF161098 4 278 3.36E-63 T 12-10-2018 IPR035906 MetI-like superfamily N288_10865 b21daca949c5037e1f6b3c379efb4e50 72 Pfam PF07872 Protein of unknown function (DUF1659) 8 50 9.0E-19 T 12-10-2018 IPR012454 Protein of unknown function DUF1659 N288_10650 ad4896a571092dcc683b845f1ff028b0 153 Pfam PF13115 YtkA-like 31 111 2.4E-14 T 12-10-2018 IPR032693 YtkA-like domain N288_03595 961fa2a5a1c6abdd635ceadf418dd5da 231 Pfam PF04239 Protein of unknown function (DUF421) 88 202 1.9E-31 T 12-10-2018 IPR007353 Protein of unknown function DUF421 N288_03595 961fa2a5a1c6abdd635ceadf418dd5da 231 Gene3D G3DSA:3.30.240.20 167 229 3.0E-16 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily N288_03595 961fa2a5a1c6abdd635ceadf418dd5da 231 Gene3D G3DSA:3.30.240.20 78 153 2.1E-22 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily N288_14710 164b9bbfed84afb22d1782a6a64d3e68 70 Pfam PF01381 Helix-turn-helix 7 61 1.2E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_14710 164b9bbfed84afb22d1782a6a64d3e68 70 SUPERFAMILY SSF47413 1 67 4.02E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_14710 164b9bbfed84afb22d1782a6a64d3e68 70 SMART SM00530 6 61 6.9E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_14710 164b9bbfed84afb22d1782a6a64d3e68 70 Gene3D G3DSA:1.10.260.40 3 67 1.6E-23 T 12-10-2018 N288_20790 1f4b375b2194cd40afdf655483fb6b41 94 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 83 2.7E-20 T 12-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 N288_20790 1f4b375b2194cd40afdf655483fb6b41 94 PIRSF PIRSF028784 1 92 1.5E-34 T 12-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 N288_25810 9045d3a15fe3500a1c0e9a05e7782a98 52 Pfam PF14116 YyzF-like protein 4 50 1.9E-21 T 12-10-2018 IPR025626 YyzF-like protein N288_25810 9045d3a15fe3500a1c0e9a05e7782a98 52 TIGRFAM TIGR04129 CxxH_BA5709: CxxH/CxxC protein, BA_5709 family 2 49 1.7E-22 T 12-10-2018 IPR025626 YyzF-like protein N288_13560 769b0c903eac76c449d2fe2420d63c1e 82 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 5 74 6.0E-19 T 12-10-2018 N288_13560 769b0c903eac76c449d2fe2420d63c1e 82 Pfam PF07293 Protein of unknown function (DUF1450) 4 75 1.0E-22 T 12-10-2018 IPR009910 Protein of unknown function DUF1450 N288_13490 0a16bf4d6bcfe09f6464fb603a27837f 342 Pfam PF07854 Protein of unknown function (DUF1646) 4 339 5.5E-119 T 12-10-2018 IPR012443 Protein of unknown function DUF1646 N288_13490 0a16bf4d6bcfe09f6464fb603a27837f 342 PIRSF PIRSF019205 1 339 1.0E-126 T 12-10-2018 IPR012443 Protein of unknown function DUF1646 N288_06410 a5dd2f9d837fa9a6984e500f40236878 791 SUPERFAMILY SSF55486 243 423 4.3E-16 T 12-10-2018 N288_06410 a5dd2f9d837fa9a6984e500f40236878 791 PIRSF PIRSF007519 2 790 1.8E-284 T 12-10-2018 IPR012300 Peptidase M6, InhA N288_06410 a5dd2f9d837fa9a6984e500f40236878 791 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 175 479 2.5E-79 T 12-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 N288_06410 a5dd2f9d837fa9a6984e500f40236878 791 Pfam PF05547 Immune inhibitor A peptidase M6 139 787 2.8E-260 T 12-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 N288_05765 39abc803265da6c1c80ff2906089a450 195 Gene3D G3DSA:3.90.1720.10 7 168 2.2E-8 T 12-10-2018 N288_05765 39abc803265da6c1c80ff2906089a450 195 SUPERFAMILY SSF54001 7 169 7.06E-8 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily N288_10440 9c2fa7411e72af40b17a8a14dff6848f 308 SUPERFAMILY SSF161098 75 286 2.13E-7 T 12-10-2018 IPR035906 MetI-like superfamily N288_10440 9c2fa7411e72af40b17a8a14dff6848f 308 Gene3D G3DSA:1.10.3720.10 70 299 2.8E-8 T 12-10-2018 IPR035906 MetI-like superfamily N288_12180 58099e06e4bca70fe1709207982e40c9 67 ProDom PD054650 YYCD 2 59 3.0E-7 T 12-10-2018 IPR020086 Uncharacterised protein family YycD N288_12180 58099e06e4bca70fe1709207982e40c9 67 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 5 64 3.8E-11 T 12-10-2018 IPR018691 Protein of unknown function DUF2188 N288_08730 c0b993cc9224559c5b93c09f349c1bc1 448 PIRSF PIRSF006446 1 446 8.6E-139 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 N288_08730 c0b993cc9224559c5b93c09f349c1bc1 448 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 431 1.1E-130 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 N288_07350 f0571b9f5d3e18150c651f16724a49ca 455 TIGRFAM TIGR00797 matE: MATE efflux family protein 16 415 1.1E-62 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 N288_07350 f0571b9f5d3e18150c651f16724a49ca 455 Pfam PF01554 MatE 241 402 2.1E-30 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 N288_07350 f0571b9f5d3e18150c651f16724a49ca 455 Pfam PF01554 MatE 16 176 2.5E-31 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 N288_07350 f0571b9f5d3e18150c651f16724a49ca 455 PIRSF PIRSF006603 2 451 8.4E-86 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 N288_09950 1aa90bab25ff6d8534509aa27de3545b 93 SUPERFAMILY SSF103007 1 93 1.19E-29 T 12-10-2018 IPR036746 TT1725-like superfamily N288_09950 1aa90bab25ff6d8534509aa27de3545b 93 Gene3D G3DSA:3.30.70.1120 1 93 9.2E-23 T 12-10-2018 IPR036746 TT1725-like superfamily N288_09950 1aa90bab25ff6d8534509aa27de3545b 93 Pfam PF04456 Protein of unknown function (DUF503) 3 88 5.6E-29 T 12-10-2018 IPR007546 Protein of unknown function DUF503 N288_17230 871ca5be0b1048245095bf9c3c14bdac 354 Pfam PF14493 Helix-turn-helix domain 258 345 1.0E-18 T 12-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 N288_17230 871ca5be0b1048245095bf9c3c14bdac 354 PIRSF PIRSF021350 4 354 8.1E-93 T 12-10-2018 IPR008308 Uncharacterised conserved protein UCP021350 N288_02550 f9b699e4d39657a6d8ab02fc618f3dd7 208 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 206 5.7E-20 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase N288_22815 77f571e7ef3750bdafe705de298a3035 423 Pfam PF13240 zinc-ribbon domain 2 24 1.3E-6 T 12-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 N288_14320 dd797373105bac0d194e470b184d9fca 198 SUPERFAMILY SSF56112 8 151 2.73E-5 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily N288_21325 61525f2900003eca935c6588e22cf6ba 187 SUPERFAMILY SSF54001 8 149 6.08E-7 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily N288_06065 ea1c8bca5b96db7ca7a3756f8427d618 1084 SUPERFAMILY SSF51445 405 761 1.35E-12 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily N288_21400 fa00562172cbf46d41f1c0e0c6289ef4 186 Gene3D G3DSA:3.40.50.10490 2 186 2.3E-56 T 12-10-2018 N288_21400 fa00562172cbf46d41f1c0e0c6289ef4 186 Pfam PF01380 SIS domain 35 156 4.9E-16 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 N288_21400 fa00562172cbf46d41f1c0e0c6289ef4 186 TIGRFAM TIGR03127 RuMP_HxlB: 6-phospho 3-hexuloisomerase 9 186 1.7E-71 T 12-10-2018 IPR017552 3-hexulose-6-phosphate isomerase GO:0016853 N288_21400 fa00562172cbf46d41f1c0e0c6289ef4 186 SUPERFAMILY SSF53697 5 185 5.06E-41 T 12-10-2018 N288_10600 7b1da233090ff2a977096314d112a5ce 200 Pfam PF04892 VanZ like family 48 168 1.1E-23 T 12-10-2018 IPR006976 VanZ-like N288_21025 e4d85f24b66af783a8318048d8dc0eff 145 Pfam PF01934 Protein of unknown function DUF86 25 126 9.5E-21 T 12-10-2018 IPR008201 Protein of unknown function DUF86 N288_21025 e4d85f24b66af783a8318048d8dc0eff 145 Gene3D G3DSA:1.20.120.580 1 144 5.1E-55 T 12-10-2018 IPR037038 Bsu32300-like superfamily N288_06095 ae2beab28bf5545dbac31b58deb407ce 251 Pfam PF13624 SurA N-terminal domain 61 179 3.8E-16 T 12-10-2018 N288_06095 ae2beab28bf5545dbac31b58deb407ce 251 Gene3D G3DSA:1.10.4030.30 54 250 1.0E-27 T 12-10-2018 N288_06095 ae2beab28bf5545dbac31b58deb407ce 251 SUPERFAMILY SSF109998 62 220 5.3E-30 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily N288_16970 86dc8212589c88c2d027d04bf1365f10 168 SUPERFAMILY SSF50022 4 159 7.73E-31 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 N288_16970 86dc8212589c88c2d027d04bf1365f10 168 Gene3D G3DSA:2.102.10.10 52 166 3.6E-24 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 N288_16970 86dc8212589c88c2d027d04bf1365f10 168 Pfam PF08802 Cytochrome B6-F complex Fe-S subunit 7 36 3.7E-6 T 12-10-2018 IPR014909 Cytochrome b6-f complex Fe-S subunit GO:0009496|GO:0042651|GO:0051537|GO:0055114 KEGG: 00195+1.10.9.1|MetaCyc: PWY-101 N288_16970 86dc8212589c88c2d027d04bf1365f10 168 Pfam PF00355 Rieske [2Fe-2S] domain 80 149 3.6E-14 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 N288_03370 55e038e4bae09e06104089d66ea27152 230 SUPERFAMILY SSF116726 138 216 1.11E-12 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 N288_03370 55e038e4bae09e06104089d66ea27152 230 Pfam PF02080 TrkA-C domain 153 215 4.2E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 N288_03370 55e038e4bae09e06104089d66ea27152 230 Gene3D G3DSA:3.30.70.1450 143 217 2.6E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 N288_16305 d726b825c520fedb7ba1c7e1ed703f00 376 Pfam PF03845 Spore germination protein 17 326 1.4E-75 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 N288_16305 d726b825c520fedb7ba1c7e1ed703f00 376 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 20 364 6.6E-61 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 N288_19200 a46035629286202e2100ccb73cab75d4 277 Pfam PF01578 Cytochrome C assembly protein 69 266 7.0E-30 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 N288_12015 54279f83610b74370216a8ed3e404f24 128 Gene3D G3DSA:4.10.810.10 70 105 2.1E-5 T 12-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 N288_12015 54279f83610b74370216a8ed3e404f24 128 Pfam PF08858 IDEAL domain 74 97 1.3E-6 T 12-10-2018 IPR014957 IDEAL domain N288_16035 922224c4d5f35c083b6d81ca8b54baef 155 Gene3D G3DSA:2.60.40.790 29 149 1.6E-19 T 12-10-2018 IPR008978 HSP20-like chaperone N288_16035 922224c4d5f35c083b6d81ca8b54baef 155 SUPERFAMILY SSF49764 39 146 2.69E-18 T 12-10-2018 IPR008978 HSP20-like chaperone N288_16035 922224c4d5f35c083b6d81ca8b54baef 155 Pfam PF00011 Hsp20/alpha crystallin family 56 145 3.2E-12 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain N288_05415 c731cf9fbe93e3bbfb9ceae85a3acc8e 114 SMART SM01022 18 113 2.9E-5 T 12-10-2018 IPR007374 ASCH domain N288_05415 c731cf9fbe93e3bbfb9ceae85a3acc8e 114 SUPERFAMILY SSF88697 24 110 3.23E-14 T 12-10-2018 IPR015947 PUA-like superfamily N288_05415 c731cf9fbe93e3bbfb9ceae85a3acc8e 114 Pfam PF04266 ASCH domain 26 111 2.0E-6 T 12-10-2018 IPR007374 ASCH domain N288_21455 34bc9869bf087eaf872cc7ddba9bcdc5 396 Pfam PF00999 Sodium/hydrogen exchanger family 8 389 1.6E-63 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 N288_21455 34bc9869bf087eaf872cc7ddba9bcdc5 396 Gene3D G3DSA:1.20.1530.20 4 395 4.0E-16 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily N288_11505 318dda317f3ac06da502ddbe6fea9f8c 132 Gene3D G3DSA:3.10.129.10 3 131 5.3E-31 T 12-10-2018 N288_11505 318dda317f3ac06da502ddbe6fea9f8c 132 SUPERFAMILY SSF54637 3 128 3.12E-33 T 12-10-2018 IPR029069 HotDog domain superfamily N288_11505 318dda317f3ac06da502ddbe6fea9f8c 132 Pfam PF03061 Thioesterase superfamily 65 106 3.4E-4 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 N288_05150 aced9fb1bd8605b20706f6745c5b78f8 136 Pfam PF07885 Ion channel 43 122 5.2E-13 T 12-10-2018 IPR013099 Potassium channel domain N288_05150 aced9fb1bd8605b20706f6745c5b78f8 136 SUPERFAMILY SSF81324 24 120 6.54E-13 T 12-10-2018 N288_05150 aced9fb1bd8605b20706f6745c5b78f8 136 Gene3D G3DSA:1.10.287.70 23 129 1.9E-12 T 12-10-2018 N288_06240 e21eb21c1008f320d33743b43b8c812e 176 SUPERFAMILY SSF52218 1 167 2.01E-41 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_06240 e21eb21c1008f320d33743b43b8c812e 176 Pfam PF03358 NADPH-dependent FMN reductase 1 135 2.3E-31 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 N288_06240 e21eb21c1008f320d33743b43b8c812e 176 Gene3D G3DSA:3.40.50.360 1 170 4.9E-45 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_12220 6efcb8bd3bd69510e21a779cf28a5886 78 ProDom PD028055 SPLA TRANSCRIPTIONAL TRANSCRIPTION REGULATOR REGULATION 10 75 4.0E-12 T 12-10-2018 N288_12220 6efcb8bd3bd69510e21a779cf28a5886 78 Pfam PF11132 Transcriptional regulator protein (SplA) 6 78 2.8E-36 T 12-10-2018 IPR022608 Transcription regulator SplA N288_03080 b885fbe72606744f10a76e43b68eaf73 255 Pfam PF06738 Putative threonine/serine exporter 14 252 2.9E-80 T 12-10-2018 IPR010619 Putative threonine/serine exporter N288_24595 22016447495b3f6672b662e10280e0d0 178 Pfam PF14417 MEDS: MEthanogen/methylotroph, DcmR Sensory domain 19 171 4.0E-24 T 12-10-2018 IPR025847 MEDS domain N288_06545 9bc24c1fa99a31aea5dad5a89c0cdace 121 Gene3D G3DSA:2.60.120.10 2 101 1.7E-35 T 12-10-2018 IPR014710 RmlC-like jelly roll fold N288_06545 9bc24c1fa99a31aea5dad5a89c0cdace 121 Pfam PF07883 Cupin domain 35 87 6.0E-13 T 12-10-2018 IPR013096 Cupin 2, conserved barrel N288_06545 9bc24c1fa99a31aea5dad5a89c0cdace 121 SUPERFAMILY SSF51182 1 107 3.37E-28 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily N288_13000 daef34bf62bf7a83de5648f05b5ec939 71 SUPERFAMILY SSF57938 24 63 1.7E-5 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily N288_14400 8dc4bb3ccd41e626e678e55c7c84db53 69 Pfam PF13314 Domain of unknown function (DUF4083) 17 65 5.5E-15 T 12-10-2018 IPR025143 Protein of unknown function DUF4083 N288_24575 b9ddb35566b81825fe1d9a04711dd40f 159 Pfam PF11188 Protein of unknown function (DUF2975) 42 159 1.2E-35 T 12-10-2018 IPR021354 Protein of unknown function DUF2975 N288_06295 7e17806f044e5e018bf680f218d9d2f8 116 Pfam PF13798 Protein of unknown function with PCYCGC motif 12 103 3.6E-17 T 12-10-2018 IPR025673 Protein of unknown function with PCYCGC motif N288_05645 dffce68f3882f1367143267dbd619b58 326 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 2 178 1.5E-27 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase N288_06870 05824eef0f1cdff00d9468281d237686 403 Pfam PF05975 Bacterial ABC transporter protein EcsB 6 386 7.4E-132 T 12-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 N288_06870 05824eef0f1cdff00d9468281d237686 403 PIRSF PIRSF037259 2 403 1.1E-124 T 12-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 N288_04445 9175b1a0e4139bf6b3fa27b223f23837 199 Pfam PF07905 Purine catabolism regulatory protein-like family 16 120 1.7E-14 T 12-10-2018 IPR012914 Purine catabolism PurC-like domain N288_02270 f916274443d478af351377f167fce202 436 Pfam PF13786 Domain of unknown function (DUF4179) 41 131 1.5E-18 T 12-10-2018 IPR025436 Domain of unknown function DUF4179 N288_02270 f916274443d478af351377f167fce202 436 Gene3D G3DSA:2.60.40.1630 72 208 3.9E-14 T 12-10-2018 N288_05545 fde33e4ccfeb4f1bcce407e12f3398ed 323 Gene3D G3DSA:3.90.550.10 1 195 1.3E-37 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_05545 fde33e4ccfeb4f1bcce407e12f3398ed 323 SUPERFAMILY SSF53448 3 246 6.75E-38 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_05545 fde33e4ccfeb4f1bcce407e12f3398ed 323 Pfam PF00535 Glycosyl transferase family 2 7 168 2.8E-31 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 N288_17410 b8c188eb48fcff94cb0a7b469cddadb6 191 Pfam PF14097 Stage V sporulation protein AE1 6 185 5.1E-84 T 12-10-2018 IPR025914 Stage V sporulation protein AE N288_00585 0488500ab1b2f35b91277c6925c16129 153 Gene3D G3DSA:1.10.1200.150 73 153 4.6E-31 T 12-10-2018 N288_00585 0488500ab1b2f35b91277c6925c16129 153 PIRSF PIRSF010607 1 153 1.9E-65 T 12-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 N288_00585 0488500ab1b2f35b91277c6925c16129 153 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 3 150 4.0E-57 T 12-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 N288_00585 0488500ab1b2f35b91277c6925c16129 153 Gene3D G3DSA:1.10.10.1240 2 72 1.1E-35 T 12-10-2018 N288_04920 d0006314402ef681a3f2c5293d3c58c6 246 Pfam PF01925 Sulfite exporter TauE/SafE 5 239 9.3E-41 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 N288_11095 ea76d2d5ff74baa2a4e8ec545674498e 290 Pfam PF03313 Serine dehydratase alpha chain 16 275 1.4E-77 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit N288_11095 ea76d2d5ff74baa2a4e8ec545674498e 290 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 2 289 6.6E-143 T 12-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 N288_07310 7bfde2c541e5fa736f4c3b515930f0e1 420 Pfam PF12698 ABC-2 family transporter protein 20 410 6.9E-23 T 12-10-2018 N288_17285 8a9cff87e5eab963c090aaa2c855ad08 427 ProDom PD136539 TRANSCRIPTION SIGMA-X NEGATIVE ACTIVITY RSIX REPRESSOR MEMBRANE EFFECTOR REGULATION REGULATOR 4 422 7.0E-18 T 12-10-2018 N288_21350 692496bbc274d4ae3878613d96198013 324 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 178 318 1.2E-29 T 12-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding N288_21350 692496bbc274d4ae3878613d96198013 324 Pfam PF03445 Putative nucleotidyltransferase DUF294 24 139 4.5E-31 T 12-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 N288_02390 b2eebcfa0ac1f88ce4fc5a915de99f0b 69 SMART SM00530 4 59 1.0E-18 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_02390 b2eebcfa0ac1f88ce4fc5a915de99f0b 69 Pfam PF01381 Helix-turn-helix 5 59 1.4E-18 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 N288_02390 b2eebcfa0ac1f88ce4fc5a915de99f0b 69 SUPERFAMILY SSF47413 3 62 8.58E-20 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 N288_02390 b2eebcfa0ac1f88ce4fc5a915de99f0b 69 Gene3D G3DSA:1.10.260.40 1 64 7.6E-28 T 12-10-2018 N288_23605 64a577264bb41a2012e107f824361df0 139 Pfam PF04892 VanZ like family 10 116 1.7E-9 T 12-10-2018 IPR006976 VanZ-like N288_06995 dc099d3a36d9756bf136ee2eefc34539 418 Gene3D G3DSA:2.60.40.4170 62 243 2.9E-26 T 12-10-2018 N288_06995 dc099d3a36d9756bf136ee2eefc34539 418 Pfam PF16781 Domain of unknown function (DUF5068) 58 243 4.7E-99 T 12-10-2018 IPR031888 Protein of unknown function DUF5068 N288_23055 5c8c6410cddadf39d0c75a8248e1479a 311 SUPERFAMILY SSF161098 73 300 2.22E-67 T 12-10-2018 IPR035906 MetI-like superfamily N288_23055 5c8c6410cddadf39d0c75a8248e1479a 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 300 5.1E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_23055 5c8c6410cddadf39d0c75a8248e1479a 311 Gene3D G3DSA:1.10.3720.10 69 308 8.7E-76 T 12-10-2018 IPR035906 MetI-like superfamily N288_06190 b9d114f1afd72b7c98f875cde3435244 85 Pfam PF04226 Transglycosylase associated protein 34 79 7.1E-12 T 12-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 N288_16060 774f22887770aa08da5333cd38c2129f 328 Gene3D G3DSA:2.130.10.10 33 243 7.8E-11 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 N288_16060 774f22887770aa08da5333cd38c2129f 328 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 281 320 6.6E-8 T 12-10-2018 IPR011964 YVTN beta-propeller repeat N288_16060 774f22887770aa08da5333cd38c2129f 328 Gene3D G3DSA:2.130.10.10 244 324 9.0E-7 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 N288_16060 774f22887770aa08da5333cd38c2129f 328 SUPERFAMILY SSF51004 35 319 1.96E-28 T 12-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily N288_13585 6231191ed060d59654ec72ea2658b998 108 Pfam PF12728 Helix-turn-helix domain 46 100 2.5E-6 T 12-10-2018 N288_25755 c09aa8c4f70d4b9c4cb4deefd4437a2e 159 Pfam PF07849 Protein of unknown function (DUF1641) 118 154 5.9E-16 T 12-10-2018 IPR012440 Protein of unknown function DUF1641 N288_18470 01ba968cfa1644062e55e3264078dd3c 248 SUPERFAMILY SSF88697 2 66 2.98E-13 T 12-10-2018 IPR015947 PUA-like superfamily N288_18470 01ba968cfa1644062e55e3264078dd3c 248 PIRSF PIRSF015601 1 247 4.9E-62 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 N288_18470 01ba968cfa1644062e55e3264078dd3c 248 SUPERFAMILY SSF75217 71 247 5.67E-54 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases N288_18470 01ba968cfa1644062e55e3264078dd3c 248 Gene3D G3DSA:3.40.1280.10 1 248 8.8E-88 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal N288_18470 01ba968cfa1644062e55e3264078dd3c 248 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 10 247 4.5E-67 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 N288_18470 01ba968cfa1644062e55e3264078dd3c 248 Pfam PF04452 RNA methyltransferase 16 242 2.0E-73 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 N288_14125 4aa21ee81921bb4ccad867950bdc42c7 140 Gene3D G3DSA:1.20.120.450 2 140 1.1E-36 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_14125 4aa21ee81921bb4ccad867950bdc42c7 140 Pfam PF05163 DinB family 4 136 8.9E-25 T 12-10-2018 IPR007837 DNA damage-inducible protein DinB N288_14125 4aa21ee81921bb4ccad867950bdc42c7 140 SUPERFAMILY SSF109854 4 124 1.78E-27 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes N288_03860 8b4eca2743567fc543fd53fc1b0a4f69 111 SUPERFAMILY SSF54909 30 102 9.12E-11 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel N288_23655 0458d9abc940ded3e12c8df34d618e39 174 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 21 161 2.5E-36 T 12-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 N288_23655 0458d9abc940ded3e12c8df34d618e39 174 Gene3D G3DSA:1.20.120.1200 7 164 1.0E-39 T 12-10-2018 N288_25990 feaa2d4cd8140fc0d365ae75958ae72f 185 Pfam PF14066 Protein of unknown function (DUF4256) 13 185 5.8E-93 T 12-10-2018 IPR025352 Protein of unknown function DUF4256 N288_20210 a2bee25af3862e1fe28f5c435a5ac3e1 291 Gene3D G3DSA:3.90.70.10 90 291 9.3E-73 T 12-10-2018 N288_20210 a2bee25af3862e1fe28f5c435a5ac3e1 291 Pfam PF13529 Peptidase_C39 like family 95 260 2.2E-38 T 12-10-2018 IPR039564 Peptidase C39-like N288_16425 8702a170df5c0d29598f6f74d2202fc0 196 Pfam PF14005 YpjP-like protein 63 194 3.1E-61 T 12-10-2018 IPR025616 YpjP-like protein N288_25140 d0ebb090e4af9a3054bb8f4633fed758 249 Pfam PF01061 ABC-2 type transporter 5 214 1.9E-24 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 N288_25140 d0ebb090e4af9a3054bb8f4633fed758 249 PIRSF PIRSF006648 1 249 1.8E-65 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 N288_08265 3aa4918c02d3c15abd8e9eae6118cc74 158 Pfam PF00583 Acetyltransferase (GNAT) family 20 118 1.2E-10 T 12-10-2018 IPR000182 GNAT domain N288_08265 3aa4918c02d3c15abd8e9eae6118cc74 158 SUPERFAMILY SSF55729 1 127 1.61E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_08265 3aa4918c02d3c15abd8e9eae6118cc74 158 Gene3D G3DSA:3.40.630.30 9 158 3.7E-21 T 12-10-2018 N288_22555 998b7e56a807df43ff5fe54b2599ccc6 420 Gene3D G3DSA:1.10.4160.10 8 418 2.4E-46 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily N288_22555 998b7e56a807df43ff5fe54b2599ccc6 420 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 13 397 2.4E-54 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 N288_06820 41c44868bdb0be9c0452b8560d2bb582 180 Pfam PF11667 Putative zincin peptidase 59 164 6.7E-23 T 12-10-2018 IPR021683 Putative zincin peptidase N288_23535 451196ecbc5d5e50a43b3d6cff540843 88 Pfam PF11772 DNA-directed RNA polymerase subunit beta 42 87 8.3E-18 T 12-10-2018 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA N288_07270 991c6c43da234c6f8b3fed31a99e86b5 169 SUPERFAMILY SSF52540 5 132 1.14E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_07270 991c6c43da234c6f8b3fed31a99e86b5 169 Gene3D G3DSA:3.40.50.300 2 168 9.9E-13 T 12-10-2018 N288_13125 45736c772687ff07f7bc29975ec79ddc 186 Gene3D G3DSA:3.30.460.40 5 177 1.5E-12 T 12-10-2018 N288_21230 b4b54e66e47270bfdc118cb43007b9e9 391 Pfam PF00872 Transposase, Mutator family 11 366 4.6E-98 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 N288_18125 e38873b547da27b207cd15d2fad7ef75 67 Pfam PF06014 Bacterial protein of unknown function (DUF910) 1 60 2.4E-28 T 12-10-2018 IPR009256 Protein of unknown function DUF910 N288_18125 e38873b547da27b207cd15d2fad7ef75 67 Gene3D G3DSA:1.10.287.760 1 67 1.8E-26 T 12-10-2018 IPR023164 YqgQ-like superfamily N288_18125 e38873b547da27b207cd15d2fad7ef75 67 SUPERFAMILY SSF158379 1 61 9.55E-23 T 12-10-2018 IPR023164 YqgQ-like superfamily N288_06650 f7581ad85d559b8998b6b23381e339a3 372 SUPERFAMILY SSF56059 158 346 1.35E-11 T 12-10-2018 N288_06650 f7581ad85d559b8998b6b23381e339a3 372 Gene3D G3DSA:3.30.470.20 248 368 5.4E-5 T 12-10-2018 N288_06650 f7581ad85d559b8998b6b23381e339a3 372 Pfam PF14398 YheC/D like ATP-grasp 131 369 3.1E-51 T 12-10-2018 IPR026838 Endospore coat-associated protein YheC/D N288_25875 0e701fe7ae0f864aad0e19c5582d8b37 845 Pfam PF02687 FtsX-like permease family 745 835 1.2E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 N288_25875 0e701fe7ae0f864aad0e19c5582d8b37 845 Pfam PF02687 FtsX-like permease family 310 407 2.6E-8 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 N288_23830 77d5d4f72a2f9e3952afb42a801e6f73 232 Pfam PF09551 Stage II sporulation protein R (spore_II_R) 39 164 9.6E-49 T 12-10-2018 IPR014202 Sporulation stage II, protein R N288_23830 77d5d4f72a2f9e3952afb42a801e6f73 232 TIGRFAM TIGR02837 spore_II_R: stage II sporulation protein R 6 169 6.6E-64 T 12-10-2018 IPR014202 Sporulation stage II, protein R N288_13605 7f821ece649afaf2ca7372aafd577c61 195 Pfam PF04892 VanZ like family 69 188 1.8E-19 T 12-10-2018 IPR006976 VanZ-like N288_22630 2945d30bebfbd421c1fe4f7d0403c8a3 567 SUPERFAMILY SSF88713 283 501 2.7E-8 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 N288_22630 2945d30bebfbd421c1fe4f7d0403c8a3 567 Gene3D G3DSA:3.20.20.370 258 512 4.3E-12 T 12-10-2018 N288_02220 98be5b27c1b4f19d9f37ce1279bbc9d8 327 Gene3D G3DSA:1.20.1530.20 1 307 2.0E-109 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily N288_02220 98be5b27c1b4f19d9f37ce1279bbc9d8 327 Pfam PF01758 Sodium Bile acid symporter family 41 220 9.1E-42 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 N288_08105 0fc03b7a08708120a13403e64ca99bcf 174 Pfam PF01957 NfeD-like C-terminal, partner-binding 57 170 2.1E-5 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain N288_08105 0fc03b7a08708120a13403e64ca99bcf 174 Gene3D G3DSA:2.40.50.140 93 174 1.0E-29 T 12-10-2018 N288_02825 618bc9e1c8e388e37462f641e2b042bf 246 PIRSF PIRSF006648 4 245 3.3E-20 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 N288_02825 618bc9e1c8e388e37462f641e2b042bf 246 Pfam PF12698 ABC-2 family transporter protein 53 237 2.4E-18 T 12-10-2018 N288_14615 c1de4c4d7ae667c4a9901ef0a70130e2 567 Gene3D G3DSA:3.30.2010.10 322 412 6.8E-11 T 12-10-2018 N288_14615 c1de4c4d7ae667c4a9901ef0a70130e2 567 Pfam PF01435 Peptidase family M48 330 545 4.0E-19 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 N288_11405 dab6f026ab10523fab06c4d38f60e30a 511 Gene3D G3DSA:3.90.550.10 101 391 9.6E-40 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_11405 dab6f026ab10523fab06c4d38f60e30a 511 Pfam PF00535 Glycosyl transferase family 2 126 253 4.8E-17 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 N288_11405 dab6f026ab10523fab06c4d38f60e30a 511 SUPERFAMILY SSF53448 123 360 4.58E-36 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_07530 c2ae91f3f25833d832aa7bb5c20a315f 245 SUPERFAMILY SSF53474 42 189 2.76E-11 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_07530 c2ae91f3f25833d832aa7bb5c20a315f 245 Gene3D G3DSA:3.40.50.1820 26 195 1.0E-10 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold N288_08725 1e398f8924527eee78339a65385889f2 301 Pfam PF14257 Domain of unknown function (DUF4349) 17 287 3.2E-79 T 12-10-2018 IPR025645 Domain of unknown function DUF4349 N288_03290 86edd054ce61de8e994091d464c13be3 215 Pfam PF04012 PspA/IM30 family 3 208 5.8E-19 T 12-10-2018 IPR007157 PspA/IM30 N288_13960 1dc797ffe547b26a4cd1a2cdcc6d1a8a 170 SUPERFAMILY SSF55961 9 167 2.75E-34 T 12-10-2018 N288_13960 1dc797ffe547b26a4cd1a2cdcc6d1a8a 170 Gene3D G3DSA:3.30.530.20 2 169 2.9E-44 T 12-10-2018 IPR023393 START-like domain superfamily N288_13960 1dc797ffe547b26a4cd1a2cdcc6d1a8a 170 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 21 165 6.2E-23 T 12-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like N288_09300 ee6e8f4ee211cd1177cec42e652a9e52 113 Gene3D G3DSA:1.20.120.910 13 78 2.4E-8 T 12-10-2018 N288_12810 b035a909ed2dd92e5bc6defe2ed625a4 140 Pfam PF04138 GtrA-like protein 20 138 1.2E-17 T 12-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 N288_16805 0415538214cbcb7068ab520ea4c8b85b 68 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 54 1.0E-7 T 12-10-2018 N288_16805 0415538214cbcb7068ab520ea4c8b85b 68 Pfam PF14178 YppF-like protein 1 58 2.4E-30 T 12-10-2018 IPR025553 YppF-like protein N288_19145 dbbfa04f23e07c67b0615f58dfcb98a6 939 SMART SM00327 76 318 6.3E-19 T 12-10-2018 IPR002035 von Willebrand factor, type A N288_19145 dbbfa04f23e07c67b0615f58dfcb98a6 939 SMART SM00635 745 822 2.9E-4 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 N288_19145 dbbfa04f23e07c67b0615f58dfcb98a6 939 SUPERFAMILY SSF53300 76 304 6.47E-22 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_19145 dbbfa04f23e07c67b0615f58dfcb98a6 939 Pfam PF13519 von Willebrand factor type A domain 79 194 2.0E-13 T 12-10-2018 IPR002035 von Willebrand factor, type A N288_19145 dbbfa04f23e07c67b0615f58dfcb98a6 939 SUPERFAMILY SSF49373 746 826 4.87E-6 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments N288_19145 dbbfa04f23e07c67b0615f58dfcb98a6 939 Gene3D G3DSA:2.60.40.1080 744 827 5.9E-12 T 12-10-2018 N288_19145 dbbfa04f23e07c67b0615f58dfcb98a6 939 Gene3D G3DSA:3.40.50.410 69 328 3.5E-42 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily N288_24695 c5f5f19f78374c0fa2c6a403025b479d 344 Pfam PF11553 Protein of unknown function (DUF3231) 180 341 1.2E-38 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_24695 c5f5f19f78374c0fa2c6a403025b479d 344 Pfam PF11553 Protein of unknown function (DUF3231) 10 172 1.5E-54 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_24695 c5f5f19f78374c0fa2c6a403025b479d 344 Gene3D G3DSA:1.20.1260.10 11 158 9.5E-11 T 12-10-2018 IPR012347 Ferritin-like N288_15385 41e6b2bdce97e9ca1944092c8f9a8d87 317 Pfam PF08378 Nuclease-related domain 36 142 2.3E-17 T 12-10-2018 IPR011528 Nuclease-related domain, NERD N288_09015 56f1d71db238299121db645eb4cf7654 161 SUPERFAMILY SSF54637 53 160 7.48E-28 T 12-10-2018 IPR029069 HotDog domain superfamily N288_09015 56f1d71db238299121db645eb4cf7654 161 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 53 154 2.6E-16 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 N288_09015 56f1d71db238299121db645eb4cf7654 161 Pfam PF03061 Thioesterase superfamily 73 148 7.8E-15 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 N288_09015 56f1d71db238299121db645eb4cf7654 161 Gene3D G3DSA:3.10.129.10 1 161 1.6E-47 T 12-10-2018 N288_07370 c34bdc109b7e5740e9351e9c7a38a2c7 426 SUPERFAMILY SSF160964 121 175 1.23E-7 T 12-10-2018 N288_07370 c34bdc109b7e5740e9351e9c7a38a2c7 426 Gene3D G3DSA:1.10.3720.10 169 426 5.1E-64 T 12-10-2018 IPR035906 MetI-like superfamily N288_07370 c34bdc109b7e5740e9351e9c7a38a2c7 426 SUPERFAMILY SSF161098 173 409 1.57E-53 T 12-10-2018 IPR035906 MetI-like superfamily N288_07370 c34bdc109b7e5740e9351e9c7a38a2c7 426 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 208 412 1.4E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_15960 92d005d7c9fe19256f2d15bfd694012a 108 Gene3D G3DSA:1.20.1270.360 1 108 2.3E-24 T 12-10-2018 N288_03010 1ec22e63ea1985c1ae9f3d3bdbae70d3 259 Pfam PF13346 ABC-2 family transporter protein 77 253 2.3E-6 T 12-10-2018 IPR025699 ABC-2 membrane transporter-like N288_00485 e4c7e87220d3af7d549b1dfac819f440 175 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 132 8.3E-40 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 N288_00485 e4c7e87220d3af7d549b1dfac819f440 175 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 132 4.7E-47 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 N288_00485 e4c7e87220d3af7d549b1dfac819f440 175 SUPERFAMILY SSF55083 3 157 5.1E-55 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 N288_00485 e4c7e87220d3af7d549b1dfac819f440 175 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 N288_00485 e4c7e87220d3af7d549b1dfac819f440 175 Gene3D G3DSA:3.30.70.560 2 170 5.6E-59 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 N288_14740 407120c6993ff2edeef95d5ff20473ed 453 PIRSF PIRSF006603 1 451 3.5E-67 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 N288_14740 407120c6993ff2edeef95d5ff20473ed 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 421 7.7E-95 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 N288_14740 407120c6993ff2edeef95d5ff20473ed 453 Pfam PF01554 MatE 20 180 1.0E-28 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 N288_14740 407120c6993ff2edeef95d5ff20473ed 453 Pfam PF01554 MatE 247 407 1.6E-33 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 N288_12040 0f244201e66a4ee16108fe450685f6cb 109 Gene3D G3DSA:1.10.10.10 1 108 1.3E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_12040 0f244201e66a4ee16108fe450685f6cb 109 SUPERFAMILY SSF46767 2 85 2.62E-20 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 N288_12040 0f244201e66a4ee16108fe450685f6cb 109 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 3 84 1.4E-22 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 N288_14065 f7667ef8c2d33e28b4e88b35cec96fb3 217 SMART SM00702 39 213 3.6E-44 T 12-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 N288_14065 f7667ef8c2d33e28b4e88b35cec96fb3 217 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 115 213 1.4E-16 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 N288_14065 f7667ef8c2d33e28b4e88b35cec96fb3 217 Gene3D G3DSA:2.60.120.620 20 214 4.8E-65 T 12-10-2018 N288_06170 e68488b9ccbea9ef0eaad56b0bf7d8c8 332 Pfam PF01384 Phosphate transporter family 22 321 1.5E-89 T 12-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 N288_11885 08e574a587b7ffe766e3113001dda668 215 SUPERFAMILY SSF88713 21 203 6.01E-47 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 N288_11885 08e574a587b7ffe766e3113001dda668 215 Pfam PF01522 Polysaccharide deacetylase 23 140 6.3E-27 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 N288_11885 08e574a587b7ffe766e3113001dda668 215 Gene3D G3DSA:3.20.20.370 8 212 1.0E-49 T 12-10-2018 N288_25920 3062b8ee3bd0f47e6ebdef98d4c3be17 313 Pfam PF09991 Predicted membrane protein (DUF2232) 15 301 3.2E-75 T 12-10-2018 IPR018710 Protein of unknown function DUF2232 N288_03435 fc401107ee41c0bf1fd73d02863d40e2 251 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 71 224 4.1E-34 T 12-10-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 N288_07940 18dd0a92e34ac0e7b290881c6880e385 196 Pfam PF00174 Oxidoreductase molybdopterin binding domain 22 178 1.3E-25 T 12-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 N288_07940 18dd0a92e34ac0e7b290881c6880e385 196 SUPERFAMILY SSF56524 4 195 2.09E-42 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 N288_07940 18dd0a92e34ac0e7b290881c6880e385 196 Gene3D G3DSA:3.90.420.10 9 195 9.6E-32 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 N288_22010 4d986700a3000a41369fed762d455010 698 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 425 686 2.4E-52 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 N288_22010 4d986700a3000a41369fed762d455010 698 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 9 105 4.3E-25 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 N288_22305 0f1f60a312e33f25e60f771528c9dfb3 49 SUPERFAMILY SSF47406 6 33 2.22E-7 T 12-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 N288_22305 0f1f60a312e33f25e60f771528c9dfb3 49 Pfam PF08671 Anti-repressor SinI 9 33 1.4E-10 T 12-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 N288_21615 57c563c750353d9de68b57c3592efd55 69 Pfam PF05768 Glutaredoxin-like domain (DUF836) 1 48 1.1E-10 T 12-10-2018 IPR008554 Glutaredoxin-like N288_21615 57c563c750353d9de68b57c3592efd55 69 Gene3D G3DSA:3.40.30.10 1 64 3.3E-16 T 12-10-2018 N288_21615 57c563c750353d9de68b57c3592efd55 69 SUPERFAMILY SSF52833 1 64 2.85E-12 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_20900 8fbce35eec9585ebcb7b0e4feac5f1c0 41 Pfam PF17302 Family of unknown function (DUF5351) 11 39 8.5E-17 T 12-10-2018 IPR035272 Protein of unknown function DUF5351 N288_20900 8fbce35eec9585ebcb7b0e4feac5f1c0 41 ProDom PD049837 YUIA BH3406 3 38 9.0E-7 T 12-10-2018 IPR035272 Protein of unknown function DUF5351 N288_14610 9c0d69806dd2b1392e00823f36282d45 257 Pfam PF13649 Methyltransferase domain 59 127 3.3E-12 T 12-10-2018 N288_14610 9c0d69806dd2b1392e00823f36282d45 257 SUPERFAMILY SSF53335 17 199 1.27E-22 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_14610 9c0d69806dd2b1392e00823f36282d45 257 Gene3D G3DSA:3.40.50.150 11 196 1.6E-38 T 12-10-2018 N288_24500 6f14b3a52fcbde921803db42181b06bb 202 Pfam PF01810 LysE type translocator 14 198 4.0E-24 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 N288_08880 a518cc6ec83a9bf3dc882ab4b1c8b4c6 61 Pfam PF17259 Family of unknown function (DUF5325) 2 61 9.3E-31 T 12-10-2018 IPR035211 Protein of unknown function DUF5325 N288_08880 a518cc6ec83a9bf3dc882ab4b1c8b4c6 61 ProDom PD699877 YLAF TRANSMEMBRANE MEMBRANE BH2633 1 56 8.0E-7 T 12-10-2018 IPR035211 Protein of unknown function DUF5325 N288_23220 3188d987f7cb1345c26b6df8c5b8d4b6 138 Gene3D G3DSA:3.40.960.10 1 117 3.4E-5 T 12-10-2018 N288_12300 ed31bf77dbc7924de21fe2d852f1349f 45 Pfam PF14115 YuzL-like protein 3 42 1.9E-20 T 12-10-2018 IPR025625 YuzL-like protein N288_13520 94c127793a9611f397e24f45052e5dac 343 Pfam PF01594 AI-2E family transporter 18 328 2.3E-48 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like N288_13305 bc4699adef7f0c817303f3641f2d5987 270 Pfam PF06271 RDD family 20 156 2.1E-23 T 12-10-2018 IPR010432 RDD N288_21545 08302186949166140505619e48e7632d 179 Pfam PF03358 NADPH-dependent FMN reductase 1 126 3.8E-19 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 N288_21545 08302186949166140505619e48e7632d 179 Gene3D G3DSA:3.40.50.360 1 176 9.7E-49 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_21545 08302186949166140505619e48e7632d 179 SUPERFAMILY SSF52218 1 177 2.17E-41 T 12-10-2018 IPR029039 Flavoprotein-like superfamily N288_01810 873e8c01a79e72de8532356792d318b3 116 SUPERFAMILY SSF51182 17 103 2.52E-10 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily N288_01810 873e8c01a79e72de8532356792d318b3 116 Gene3D G3DSA:2.60.120.10 14 112 7.0E-9 T 12-10-2018 IPR014710 RmlC-like jelly roll fold N288_12260 2210ecb2bd83e64e58797d4f8109a5f6 94 ProDom PD710533 YODI TRANSMEMBRANE MEMBRANE 5 43 8.0E-4 T 12-10-2018 N288_23480 3de6ec91c0cf3a0e2893b3a8de63972b 540 Pfam PF04434 SWIM zinc finger 75 98 6.8E-4 T 12-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 N288_22445 bc4c7529119e8030d26da44438e9ea65 211 Gene3D G3DSA:3.20.20.70 2 211 3.4E-70 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_22445 bc4c7529119e8030d26da44438e9ea65 211 Pfam PF01081 KDPG and KHG aldolase 9 190 1.1E-41 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 N288_22445 bc4c7529119e8030d26da44438e9ea65 211 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 203 7.9E-54 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 N288_22445 bc4c7529119e8030d26da44438e9ea65 211 SUPERFAMILY SSF51569 4 204 6.96E-61 T 12-10-2018 N288_17760 05d0ed201da0c605e4c7bc60f83f5345 86 ProDom PD058321 YQZF GSC13 TRANSMEMBRANE IG GKC13 MEMBRANE PROTEINS BH2767 RBL05544 SIMILAR 1 77 1.0E-10 T 12-10-2018 IPR020138 Uncharacterised protein family YqzF N288_17760 05d0ed201da0c605e4c7bc60f83f5345 86 Pfam PF11118 Protein of unknown function (DUF2627) 3 77 8.3E-36 T 12-10-2018 IPR020138 Uncharacterised protein family YqzF N288_00235 6ff269665159c57399164e5abbce7705 246 SUPERFAMILY SSF53335 17 198 3.52E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_00235 6ff269665159c57399164e5abbce7705 246 Pfam PF05175 Methyltransferase small domain 18 133 8.6E-10 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 N288_00235 6ff269665159c57399164e5abbce7705 246 Gene3D G3DSA:3.40.50.150 8 246 7.6E-73 T 12-10-2018 N288_13615 d1cf365c79cfde798f0b564c4bbe2bc9 160 SUPERFAMILY SSF53901 69 124 1.15E-5 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 N288_16800 f81e2f08a1d40cb7e4a8cdcfc2dd9057 181 Pfam PF14179 YppG-like protein 80 179 1.4E-37 T 12-10-2018 IPR025555 YppG-like protein N288_21760 188eb3cb19650a07df65689a1b5e2f37 103 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 3 96 5.8E-23 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 N288_21760 188eb3cb19650a07df65689a1b5e2f37 103 Gene3D G3DSA:3.40.630.40 1 103 1.2E-26 T 12-10-2018 N288_21760 188eb3cb19650a07df65689a1b5e2f37 103 SUPERFAMILY SSF53187 1 97 3.45E-24 T 12-10-2018 N288_15035 6db4b6c5094af82dd10e0e0ea43cf9a1 55 Pfam PF13217 Protein of unknown function (DUF4025) 6 54 1.5E-23 T 12-10-2018 IPR025100 Protein of unknown function DUF4025 N288_20050 4ceb20d6a50a10446785718c980ff25c 317 PIRSF PIRSF012560 1 317 6.0E-111 T 12-10-2018 IPR012397 Pullulan 6-glucanohydrolase N288_15975 795c3cf55a45ae4a5f055ea483b276bd 112 Pfam PF09685 Domain of unknown function (DUF4870) 11 111 1.1E-31 T 12-10-2018 IPR019109 Protein of unknown function DUF4870 N288_22920 3ac157d525479b714a66cc232a8ec375 113 Pfam PF11518 Protein of unknown function (DUF3221) 14 111 6.7E-26 T 12-10-2018 IPR021598 Protein of unknown function DUF3221 N288_25680 c0851ccd5ac7bf782323c73e1ba9f5c7 181 Gene3D G3DSA:1.10.10.10 6 89 6.9E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily N288_25680 c0851ccd5ac7bf782323c73e1ba9f5c7 181 PIRSF PIRSF006707 1 181 3.9E-51 T 12-10-2018 IPR026282 DNA-binding protein, MJ1563 type N288_25680 c0851ccd5ac7bf782323c73e1ba9f5c7 181 SUPERFAMILY SSF46785 7 158 2.18E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily N288_10410 86b8585fa0adff0765e9556ef6c9047f 144 Pfam PF11084 Protein of unknown function (DUF2621) 7 144 4.9E-74 T 12-10-2018 IPR020203 Uncharacterised protein family, YneK N288_10410 86b8585fa0adff0765e9556ef6c9047f 144 ProDom PD086666 YNEK BH2332 25 144 2.0E-49 T 12-10-2018 IPR020203 Uncharacterised protein family, YneK N288_21360 a69d7d0b8e73f4abf45b5670e7aa1ae0 179 Pfam PF07849 Protein of unknown function (DUF1641) 122 155 5.3E-13 T 12-10-2018 IPR012440 Protein of unknown function DUF1641 N288_01515 e8993e2daabcbd3904e9549f72e858d2 95 Gene3D G3DSA:1.10.1220.10 2 95 6.3E-42 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 N288_12615 446e7bbec2f3fa761b16bf0e87c0a0e6 481 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 317 427 7.7E-22 T 12-10-2018 IPR025299 CstA, C-terminal domain N288_12615 446e7bbec2f3fa761b16bf0e87c0a0e6 481 Pfam PF02554 Carbon starvation protein CstA 163 286 1.0E-14 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 N288_12615 446e7bbec2f3fa761b16bf0e87c0a0e6 481 Pfam PF02554 Carbon starvation protein CstA 4 158 4.8E-33 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 N288_14145 a88839ec6e822932c7b983ccd8fdd478 205 Pfam PF04239 Protein of unknown function (DUF421) 84 197 5.8E-28 T 12-10-2018 IPR007353 Protein of unknown function DUF421 N288_14145 a88839ec6e822932c7b983ccd8fdd478 205 Gene3D G3DSA:3.30.240.20 76 150 1.3E-21 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily N288_07240 897e6834c0093dc1b69e28d550eb7a10 205 Pfam PF10737 Spore germination protein GerPC 23 196 8.3E-58 T 12-10-2018 IPR019673 Spore germination protein GerPC N288_07230 362f6aa6dc1867906f54072672af610d 125 Pfam PF10970 Spore germination protein GerPE 5 120 3.4E-50 T 12-10-2018 IPR024496 Spore germination protein GerPE N288_07230 362f6aa6dc1867906f54072672af610d 125 ProDom PD031981 GERMINATION SPORE GERPE PE PROBABLE SPORULATION 6 119 3.0E-12 T 12-10-2018 IPR024496 Spore germination protein GerPE N288_01190 5f4ca19982dec966dbb60f483f11c1e7 268 Pfam PF08892 YqcI/YcgG family 58 266 3.8E-72 T 12-10-2018 IPR014988 Uncharacterised protein family, YqcI/YcgG N288_24395 0016f3714a1f22488ec0d7abf724413b 332 Pfam PF13407 Periplasmic binding protein domain 49 302 1.7E-56 T 12-10-2018 IPR025997 Periplasmic binding protein N288_24395 0016f3714a1f22488ec0d7abf724413b 332 SUPERFAMILY SSF53822 49 318 2.02E-64 T 12-10-2018 IPR028082 Periplasmic binding protein-like I N288_24395 0016f3714a1f22488ec0d7abf724413b 332 Gene3D G3DSA:3.40.50.2300 56 311 6.3E-76 T 12-10-2018 N288_24395 0016f3714a1f22488ec0d7abf724413b 332 Gene3D G3DSA:3.40.50.2300 149 317 6.3E-76 T 12-10-2018 N288_21595 a0959500004b28efd47800959eac491f 253 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 61.252 T 12-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21595 a0959500004b28efd47800959eac491f 253 Pfam PF00121 Triosephosphate isomerase 5 246 2.9E-94 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21595 a0959500004b28efd47800959eac491f 253 Gene3D G3DSA:3.20.20.70 2 253 7.8E-103 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 N288_21595 a0959500004b28efd47800959eac491f 253 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 1.3E-60 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21595 a0959500004b28efd47800959eac491f 253 SUPERFAMILY SSF51351 1 248 5.63E-94 T 12-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_21595 a0959500004b28efd47800959eac491f 253 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 12-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 N288_18740 6a776bf6d3c161dd9acf862e256d560c 356 Pfam PF01594 AI-2E family transporter 20 340 1.3E-71 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like N288_19980 01fa4ec8d8806db764e68ed588fb3d92 105 Gene3D G3DSA:3.40.30.10 1 102 1.5E-24 T 12-10-2018 N288_19980 01fa4ec8d8806db764e68ed588fb3d92 105 Pfam PF00085 Thioredoxin 10 100 3.7E-16 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 N288_19980 01fa4ec8d8806db764e68ed588fb3d92 105 SUPERFAMILY SSF52833 2 101 2.29E-26 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_03240 d50869f56cc2b4f41df62587df094ddb 529 PIRSF PIRSF005690 27 517 1.3E-174 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 N288_03240 d50869f56cc2b4f41df62587df094ddb 529 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 41 503 1.0E-181 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 N288_09025 c9e4d21eaa186b4c31f732d42e988394 80 Pfam PF14003 YlbE-like protein 14 73 2.0E-28 T 12-10-2018 IPR025613 YlbE-like protein N288_02960 748a033ab8f3fb77e5d2da555032428a 133 Pfam PF14275 Domain of unknown function (DUF4362) 24 114 2.6E-33 T 12-10-2018 IPR025372 Protein of unknown function DUF4362 N288_12380 42dcbac87648ba3415c103e156339a72 180 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 14 173 6.5E-21 T 12-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like N288_12660 fccce058789fc91aad08e767469ad32b 191 ProDom PD102989 YKOP PLASMID 11 184 3.0E-38 T 12-10-2018 N288_06140 909d7ea5f8efbf631d980631ab3ea10d 188 Pfam PF06042 Nucleotidyltransferase 25 184 6.3E-53 T 12-10-2018 IPR009267 Putative nucleotidyltransferase N288_04345 4fd3f3151c6220baabaced249b92990f 318 Gene3D G3DSA:1.10.3470.10 4 317 1.8E-53 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_04345 4fd3f3151c6220baabaced249b92990f 318 SUPERFAMILY SSF81345 6 312 3.4E-54 T 12-10-2018 IPR037294 ABC transporter, BtuC-like N288_04345 4fd3f3151c6220baabaced249b92990f 318 Pfam PF01032 FecCD transport family 36 312 1.4E-46 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 N288_05105 4f03ad69cd03774bd9a781f5cebbfae2 134 Pfam PF10694 Protein of unknown function (DUF2500) 21 126 5.2E-36 T 12-10-2018 IPR019635 Protein of unknown function DUF2500 N288_05105 4f03ad69cd03774bd9a781f5cebbfae2 134 Gene3D G3DSA:2.40.50.660 46 134 5.5E-13 T 12-10-2018 N288_02465 0f74f9030932f1f075fc18daf62202a5 60 Pfam PF06906 Protein of unknown function (DUF1272) 3 56 6.3E-25 T 12-10-2018 IPR010696 Protein of unknown function DUF1272 N288_15925 5372df528471747d4d6c12233652b73a 431 Pfam PF00860 Permease family 19 389 9.1E-37 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 N288_11785 5b7268ac5ede76097eead4e08f5dfd91 433 Pfam PF00860 Permease family 5 388 1.5E-68 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 N288_18290 d70a133f6e004d12bd306438d77594e2 84 ProDom PD060869 YQFT IG BH1387 1 73 8.0E-13 T 12-10-2018 IPR020277 Protein of unknown function DUF2624 N288_18290 d70a133f6e004d12bd306438d77594e2 84 Pfam PF11116 Protein of unknown function (DUF2624) 1 83 1.4E-33 T 12-10-2018 IPR020277 Protein of unknown function DUF2624 N288_09730 3ce7a8a3acd5f8669555a86343a4e392 211 Pfam PF03963 Flagellar hook capping protein - N-terminal region 14 74 4.5E-20 T 12-10-2018 IPR005648 Flagellar hook capping protein N288_17935 868cd1abcede1f2587ebe8ae717da281 314 ProDom PD131510 MEMBRANE METAL-DEPENDENT ENZYME YQHQ SPANNING SIMILAR LIPOPROTEIN LIPOPROTEIN PROTEIN HYP001 56 291 2.0E-91 T 12-10-2018 IPR010787 Protein of unknown function DUF1385 N288_17935 868cd1abcede1f2587ebe8ae717da281 314 Pfam PF07136 Protein of unknown function (DUF1385) 56 299 2.8E-79 T 12-10-2018 IPR010787 Protein of unknown function DUF1385 N288_06400 97a8bd0b4f6931d3a21ccc0f2f7190a9 388 Pfam PF12679 ABC-2 family transporter protein 4 384 9.3E-65 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 N288_24820 66ad792691e0d5f5a4a1402077ad80fe 136 Pfam PF03788 LrgA family 21 112 1.4E-25 T 12-10-2018 IPR005538 LrgA/CidA family GO:0016021 N288_14425 5520d83cd0477361b7ef321b7562d4b0 277 Pfam PF01740 STAS domain 174 262 1.7E-13 T 12-10-2018 IPR002645 STAS domain N288_14425 5520d83cd0477361b7ef321b7562d4b0 277 SUPERFAMILY SSF52091 166 276 4.32E-16 T 12-10-2018 IPR036513 STAS domain superfamily N288_14425 5520d83cd0477361b7ef321b7562d4b0 277 Gene3D G3DSA:3.30.750.24 163 277 4.7E-33 T 12-10-2018 IPR036513 STAS domain superfamily N288_04405 fd9b8db5418ecd2f00c81d204ea32965 292 Pfam PF12395 Protein of unknown function 170 279 3.4E-32 T 12-10-2018 IPR022123 Protein of unknown function DUF3658 N288_04405 fd9b8db5418ecd2f00c81d204ea32965 292 Pfam PF08874 Domain of unknown function (DUF1835) 10 132 3.5E-39 T 12-10-2018 IPR014973 Protein of unknown function DUF1835 N288_04235 0481bdcc6de9abd3e704ae3f0fde248e 193 SUPERFAMILY SSF160631 45 189 4.51E-9 T 12-10-2018 N288_04235 0481bdcc6de9abd3e704ae3f0fde248e 193 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 45 179 1.5E-11 T 12-10-2018 IPR018958 Knr4/Smi1-like domain N288_18150 31c7aa2c8b5aa2268bbc2aea219879d6 262 Pfam PF01940 Integral membrane protein DUF92 10 249 2.7E-60 T 12-10-2018 IPR002794 Protein of unknown function DUF92, TMEM19 GO:0016021 N288_05090 a8d53cbe5312080edf7b28c4b79554c1 232 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 4 107 1.3E-13 T 12-10-2018 IPR018745 Domain of unknown function DUF2294 N288_09850 26adbbfc4cfeac3fc1fdf849c0c1d4bf 204 ProDom PD177368 TRANSCRIPTION DNA-BINDING MOTILITY SWRB SWARMING YLXL REGULATION BH2428 163 199 0.001 T 12-10-2018 N288_09850 26adbbfc4cfeac3fc1fdf849c0c1d4bf 204 ProDom PD177368 TRANSCRIPTION DNA-BINDING MOTILITY SWRB SWARMING YLXL REGULATION BH2428 1 80 1.0E-8 T 12-10-2018 N288_04490 ad8732759c8bfca875b4421dae521807 400 Pfam PF13315 Protein of unknown function (DUF4085) 6 209 4.0E-89 T 12-10-2018 IPR025144 Protein of unknown function DUF4085 N288_07525 d0fdbf1d233d17583296bab01c11e912 63 Pfam PF11151 Protein of unknown function (DUF2929) 2 55 2.8E-19 T 12-10-2018 IPR021324 Protein of unknown function DUF2929 N288_25345 ed92e97d7b3154a936c4e30b31b835a3 332 Pfam PF12679 ABC-2 family transporter protein 9 331 3.1E-27 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 N288_19490 583991560c2b72a9ffa59ab363a5ef77 89 Pfam PF06961 Protein of unknown function (DUF1294) 12 66 2.9E-22 T 12-10-2018 IPR010718 Protein of unknown function DUF1294 N288_11495 e76052c9613518745f4c48b134a27061 340 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 298 9.7E-28 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 N288_24985 ee56869500f413a22bf9a45e061e4d78 337 Pfam PF11553 Protein of unknown function (DUF3231) 169 330 5.8E-51 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_24985 ee56869500f413a22bf9a45e061e4d78 337 Pfam PF11553 Protein of unknown function (DUF3231) 5 158 1.8E-21 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_05520 31c139d52c8de363e8312952eaf522ed 275 Gene3D G3DSA:3.40.50.1000 119 272 7.1E-16 T 12-10-2018 IPR023214 HAD superfamily N288_05520 31c139d52c8de363e8312952eaf522ed 275 Pfam PF00702 haloacid dehalogenase-like hydrolase 7 225 2.9E-8 T 12-10-2018 N288_05520 31c139d52c8de363e8312952eaf522ed 275 SUPERFAMILY SSF56784 3 270 8.67E-24 T 12-10-2018 IPR036412 HAD-like superfamily N288_10840 4f2f2a77f6f3d3bd8e76d44f49e62495 94 Pfam PF16079 Phage holin family Hol44, in holin superfamily V 14 78 1.4E-15 T 12-10-2018 IPR032111 Clostridium phage holin N288_07365 827728d9137da1bde217b95c7e154c5c 424 Pfam PF13416 Bacterial extracellular solute-binding protein 60 358 2.7E-54 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein N288_07365 827728d9137da1bde217b95c7e154c5c 424 Gene3D G3DSA:3.40.190.10 152 409 7.1E-111 T 12-10-2018 N288_07365 827728d9137da1bde217b95c7e154c5c 424 SUPERFAMILY SSF53850 40 414 2.68E-88 T 12-10-2018 N288_07365 827728d9137da1bde217b95c7e154c5c 424 Gene3D G3DSA:3.40.190.10 60 376 7.1E-111 T 12-10-2018 N288_21410 1c2a2839d5130116284a95dc52f8d495 355 SUPERFAMILY SSF75005 69 314 3.8E-11 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily N288_21410 1c2a2839d5130116284a95dc52f8d495 355 Gene3D G3DSA:2.115.10.20 14 234 6.2E-7 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily N288_14390 fa2a5a3031d42edf1efc8d6abbc1dc9a 125 Gene3D G3DSA:3.40.50.150 1 122 2.6E-6 T 12-10-2018 N288_14390 fa2a5a3031d42edf1efc8d6abbc1dc9a 125 SUPERFAMILY SSF53335 2 93 1.79E-8 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_21275 3c2d8f9e36d4c1050436f49e5d850d4f 362 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 10 350 2.3E-47 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 N288_21275 3c2d8f9e36d4c1050436f49e5d850d4f 362 Pfam PF03845 Spore germination protein 10 326 9.4E-83 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 N288_11735 43a7494103754f634ffae6b118094b4d 96 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 92 1.7E-7 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 N288_11735 43a7494103754f634ffae6b118094b4d 96 PIRSF PIRSF034852 1 96 1.1E-38 T 12-10-2018 IPR008326 Uncharacterised conserved protein UCP034852 N288_11735 43a7494103754f634ffae6b118094b4d 96 SUPERFAMILY SSF89360 1 77 7.59E-12 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 N288_10395 1ab20918f0e90811dd1db2e7f3c7fd53 235 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 10 214 4.1E-64 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 N288_20605 21ca9076522df13a71fc0ac4289ea808 233 Pfam PF02308 MgtC family 17 144 6.8E-31 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 N288_20605 21ca9076522df13a71fc0ac4289ea808 233 PRINTS PR01837 MgtC/SapB protein signature 20 39 2.6E-38 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 N288_20605 21ca9076522df13a71fc0ac4289ea808 233 PRINTS PR01837 MgtC/SapB protein signature 101 125 2.6E-38 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 N288_20605 21ca9076522df13a71fc0ac4289ea808 233 PRINTS PR01837 MgtC/SapB protein signature 73 95 2.6E-38 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 N288_20605 21ca9076522df13a71fc0ac4289ea808 233 PRINTS PR01837 MgtC/SapB protein signature 39 57 2.6E-38 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 N288_11820 1f75ab4fd693e9f28c316d18c7619d67 158 Pfam PF12638 Staygreen protein 3 149 3.8E-54 T 12-10-2018 IPR024438 Staygreen protein N288_03235 98ab23582060c8f090c57201d2055f81 372 Pfam PF03845 Spore germination protein 6 319 4.3E-59 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 N288_03235 98ab23582060c8f090c57201d2055f81 372 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 5 361 4.6E-59 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 N288_06355 20629c8b1b42775bc3f8d376351e3d3e 105 Pfam PF10925 Protein of unknown function (DUF2680) 35 91 2.5E-22 T 12-10-2018 IPR024485 Protein of unknown function DUF2680 N288_06355 20629c8b1b42775bc3f8d376351e3d3e 105 ProDom PD673109 PRECURSOR SIGNAL YCKD ORF4 DOMAIN 2 99 2.0E-13 T 12-10-2018 IPR024485 Protein of unknown function DUF2680 N288_25785 e5d830d5ce44516b94b0cbcbfea5eafd 416 Pfam PF10011 Predicted membrane protein (DUF2254) 12 370 4.8E-110 T 12-10-2018 IPR018723 Protein of unknown function DUF2254, membrane N288_05640 d3ec778433ab753395678d4177c893d3 91 Pfam PF14043 WVELL protein 4 76 6.0E-38 T 12-10-2018 IPR026952 WVELL protein N288_12365 e909c5a7fe0dc09c872d40917921efea 298 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 10 287 4.4E-12 T 12-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD N288_16585 d640add86717d7777165af78e970faf7 135 SUPERFAMILY SSF53098 1 122 8.22E-29 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily N288_16585 d640add86717d7777165af78e970faf7 135 Gene3D G3DSA:3.30.420.10 1 132 2.1E-29 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 N288_16585 d640add86717d7777165af78e970faf7 135 Pfam PF13456 Reverse transcriptase-like 7 124 3.0E-16 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 N288_20670 920d4f0de1fd930018bd86d6b0027bb4 76 Pfam PF04070 Domain of unknown function (DUF378) 3 61 4.4E-27 T 12-10-2018 IPR007211 Protein of unknown function DUF378 N288_08300 8abccbbeb4d77ac7515005b1a25f23ac 372 Pfam PF12791 Anti-sigma factor N-terminus 7 60 2.6E-12 T 12-10-2018 IPR024449 Anti-sigma factor RsgI, N-terminal N288_16295 ef44941b2d0ea84fbc0417a5cd43b987 194 Pfam PF02630 SCO1/SenC 13 176 4.7E-40 T 12-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 N288_16295 ef44941b2d0ea84fbc0417a5cd43b987 194 SUPERFAMILY SSF52833 31 193 2.52E-40 T 12-10-2018 IPR036249 Thioredoxin-like superfamily N288_16295 ef44941b2d0ea84fbc0417a5cd43b987 194 Gene3D G3DSA:3.40.30.10 23 194 2.0E-53 T 12-10-2018 N288_12860 e6f579c384f6afc67a582a156eb49eeb 90 Pfam PF13076 Fur-regulated basic protein A 48 82 2.7E-14 T 12-10-2018 IPR025072 Fur-regulated basic protein A N288_07160 6180fafe7ebf4f4a39a37fa772aa8efc 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 33 282 4.3E-40 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 N288_10405 463661ffc20be84331bdfb300b81b6c7 164 Pfam PF07301 Protein of unknown function (DUF1453) 6 149 1.9E-63 T 12-10-2018 IPR009916 Protein of unknown function DUF1453 N288_10405 463661ffc20be84331bdfb300b81b6c7 164 PIRSF PIRSF021441 1 161 4.9E-71 T 12-10-2018 IPR031306 CcdC protein N288_23515 cc49dc2f453bdf6f69762b458f3b0a15 143 Pfam PF14183 YwpF-like protein 2 131 1.6E-48 T 12-10-2018 IPR025573 YwpF-like protein N288_05315 2367da258b1e07e6f9c2e526c0272756 238 Pfam PF02754 Cysteine-rich domain 132 215 1.3E-14 T 12-10-2018 IPR004017 Cysteine-rich domain N288_05315 2367da258b1e07e6f9c2e526c0272756 238 Pfam PF02754 Cysteine-rich domain 3 84 2.2E-16 T 12-10-2018 IPR004017 Cysteine-rich domain N288_05315 2367da258b1e07e6f9c2e526c0272756 238 Hamap MF_02105 Lactate utilization protein A [lutA]. 1 238 63.891 T 12-10-2018 IPR022822 Lactate utilization protein A GO:0006089 N288_08425 ed22f80e3d88dfee81ace9f55437d290 243 Pfam PF02535 ZIP Zinc transporter 94 238 1.6E-14 T 12-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 N288_20880 63529a194903c2a2796ab463aa4d5581 159 Pfam PF02681 Divergent PAP2 family 6 148 2.7E-50 T 12-10-2018 IPR003832 Protein of unknown function DUF212 N288_09745 912f3304681cababd8493b85e9c633e3 73 Pfam PF06289 Flagellar protein (FlbD) 1 58 5.8E-26 T 12-10-2018 IPR009384 Swarming motility protein SwrD-like N288_11815 4291bbbe2aa68769360d32a790a9be33 251 SUPERFAMILY SSF69318 36 117 5.23E-5 T 12-10-2018 N288_10430 8fd6efc12acaa10bfa9865d3036e42ea 416 SUPERFAMILY SSF103473 5 399 3.92E-31 T 12-10-2018 IPR036259 MFS transporter superfamily N288_10430 8fd6efc12acaa10bfa9865d3036e42ea 416 Pfam PF07690 Major Facilitator Superfamily 9 358 7.1E-21 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 N288_10430 8fd6efc12acaa10bfa9865d3036e42ea 416 Gene3D G3DSA:1.20.1250.20 1 389 5.1E-28 T 12-10-2018 N288_02890 6d36086eb7c13fb54abc7d0776ab186d 368 SUPERFAMILY SSF53448 37 237 3.05E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_02890 6d36086eb7c13fb54abc7d0776ab186d 368 Gene3D G3DSA:3.90.550.10 29 186 2.1E-31 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases N288_02890 6d36086eb7c13fb54abc7d0776ab186d 368 Pfam PF00535 Glycosyl transferase family 2 43 158 1.4E-21 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 N288_17835 13e86b957335b9444725b8975452afd5 134 Pfam PF03780 Asp23 family, cell envelope-related function 15 119 2.6E-36 T 12-10-2018 IPR005531 Alkaline shock protein Asp23 N288_19525 4ab61c746270838d8e384a13ac7f9f4e 493 Pfam PF07261 Replication initiation and membrane attachment 360 421 5.2E-10 T 12-10-2018 IPR006343 DnaD domain N288_03935 7760a2500d6d500534b2f90449ac82ff 554 Gene3D G3DSA:3.40.50.300 1 296 1.3E-5 T 12-10-2018 N288_09105 d74df7e9a38752b8f013c4d072f8e13a 160 PIRSF PIRSF037732 1 160 1.6E-83 T 12-10-2018 IPR017274 Putative N-acetyltransferase YlbP N288_09105 d74df7e9a38752b8f013c4d072f8e13a 160 SUPERFAMILY SSF55729 31 140 5.32E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_09105 d74df7e9a38752b8f013c4d072f8e13a 160 Gene3D G3DSA:3.40.630.30 2 159 4.1E-59 T 12-10-2018 N288_09105 d74df7e9a38752b8f013c4d072f8e13a 160 Hamap MF_00824 Uncharacterized N-acetyltransferase . 2 149 42.29 T 12-10-2018 IPR017274 Putative N-acetyltransferase YlbP N288_09105 d74df7e9a38752b8f013c4d072f8e13a 160 Pfam PF13508 Acetyltransferase (GNAT) domain 81 130 1.1E-8 T 12-10-2018 IPR000182 GNAT domain N288_04245 9e3d3d5c57238d52b113c0d353c14923 154 SUPERFAMILY SSF58100 7 124 6.54E-5 T 12-10-2018 N288_14935 578fb380a678863488cc7d14c6260e54 67 Pfam PF06150 ChaB 9 65 3.5E-26 T 12-10-2018 IPR009317 ChaB N288_14935 578fb380a678863488cc7d14c6260e54 67 SUPERFAMILY SSF140376 2 65 2.35E-25 T 12-10-2018 IPR037205 ChaB superfamily N288_14935 578fb380a678863488cc7d14c6260e54 67 Gene3D G3DSA:1.10.1740.70 2 66 3.9E-27 T 12-10-2018 N288_02605 4e32c7c6ccaba4b9eb267ef58ddb7a43 131 Pfam PF10710 Protein of unknown function (DUF2512) 1 128 6.3E-35 T 12-10-2018 IPR019649 Protein of unknown function DUF2512 N288_17050 fc4bf492dde0ecbc033309d1215b866c 273 Pfam PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 21 231 1.0E-82 T 12-10-2018 IPR009920 Heptaprenyl diphosphate synthase subunit 1 GO:0009234 KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 N288_05945 991b5b11038e9c78069c38682a62fe97 293 Pfam PF12671 Putative amidase domain 133 286 3.0E-41 T 12-10-2018 IPR024301 Putative amidase domain N288_15335 e873bdcee39057968ddbc72748b044e5 303 Pfam PF03547 Membrane transport protein 6 137 1.5E-9 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 N288_15335 e873bdcee39057968ddbc72748b044e5 303 Pfam PF03547 Membrane transport protein 153 295 1.1E-16 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 N288_14820 114a0426dc7a921fc51f16f6cfe1f2c2 249 SUPERFAMILY SSF54001 14 230 5.89E-20 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily N288_25560 b2713f1dcfe439bd81c161de166e7b24 210 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 1 210 27.415 T 12-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 N288_25560 b2713f1dcfe439bd81c161de166e7b24 210 SUPERFAMILY SSF110395 1 209 8.89E-59 T 12-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 N288_25560 b2713f1dcfe439bd81c161de166e7b24 210 Gene3D G3DSA:3.20.20.380 1 210 3.0E-75 T 12-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 N288_25560 b2713f1dcfe439bd81c161de166e7b24 210 Pfam PF03932 CutC family 1 207 8.4E-66 T 12-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 N288_24940 699ad68554d439ed3e7188db6467721c 239 Gene3D G3DSA:3.40.630.30 50 220 7.2E-7 T 12-10-2018 N288_24940 699ad68554d439ed3e7188db6467721c 239 SUPERFAMILY SSF55729 121 227 2.17E-8 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_02115 c905f5d7b7f3b94a0b936a5682243ae3 112 Pfam PF09350 Domain of unknown function (DUF1992) 15 66 4.6E-11 T 12-10-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain N288_24840 63beabd6c3e028bc8d533fe1a9c5fc64 258 Pfam PF00005 ABC transporter 21 165 5.0E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 N288_24840 63beabd6c3e028bc8d533fe1a9c5fc64 258 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 N288_24840 63beabd6c3e028bc8d533fe1a9c5fc64 258 SMART SM00382 30 213 9.5E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain N288_24840 63beabd6c3e028bc8d533fe1a9c5fc64 258 SUPERFAMILY SSF52540 3 226 1.01E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_24840 63beabd6c3e028bc8d533fe1a9c5fc64 258 Gene3D G3DSA:3.40.50.300 2 244 3.1E-62 T 12-10-2018 N288_13735 0f8b0add64915de26a95f717f3b7b43f 523 Gene3D G3DSA:1.10.10.1320 2 94 9.0E-5 T 12-10-2018 N288_13735 0f8b0add64915de26a95f717f3b7b43f 523 Pfam PF13786 Domain of unknown function (DUF4179) 80 170 3.5E-11 T 12-10-2018 IPR025436 Domain of unknown function DUF4179 N288_08735 2632db5b2cd0689dee16f3574a8caf8b 337 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 326 2.5E-40 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 N288_06925 6f760d8cbdc02b0a2adc5882d0f4f0c4 302 Pfam PF04294 VanW like protein 147 274 1.5E-49 T 12-10-2018 IPR007391 Vancomycin resistance VanW N288_14905 ec369f675afb557df668c90f57ed7799 502 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 439 9.7E-151 T 12-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane N288_20275 de58266c2e17e86dd0848f33aa9d1aa8 148 Pfam PF14328 Domain of unknown function (DUF4385) 4 145 3.6E-69 T 12-10-2018 IPR025494 Protein of unknown function DUF4385 N288_13085 368cc27186e6792e70b0b7f5d839949e 47 Pfam PF08671 Anti-repressor SinI 16 39 1.9E-11 T 12-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 N288_13085 368cc27186e6792e70b0b7f5d839949e 47 SUPERFAMILY SSF47406 16 40 9.94E-7 T 12-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 N288_10465 1df3652f5f1e99824cc0131978d39d80 374 Pfam PF03845 Spore germination protein 47 307 2.9E-23 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 N288_16945 ea29b3bd84f806eec7cf66c9bb95db6c 225 Pfam PF04298 Putative neutral zinc metallopeptidase 4 218 4.7E-93 T 12-10-2018 IPR007395 Putative neutral zinc metallopeptidase N288_24495 fe016b83f48a95dd48ff4423f5567585 648 PIRSF PIRSF018968 1 648 4.0E-153 T 12-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 N288_24495 fe016b83f48a95dd48ff4423f5567585 648 Pfam PF02687 FtsX-like permease family 85 170 1.8E-6 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 N288_09725 fd4f6b3ac1b11a8485a9bf56e2c40597 420 Gene3D G3DSA:3.30.750.140 272 401 6.3E-11 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily N288_09725 fd4f6b3ac1b11a8485a9bf56e2c40597 420 Pfam PF02120 Flagellar hook-length control protein FliK 297 375 1.4E-17 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal N288_08990 ed26d33001e3d34111d92f35a9a81b2f 352 Pfam PF01594 AI-2E family transporter 14 343 2.2E-64 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like N288_08990 ed26d33001e3d34111d92f35a9a81b2f 352 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 11 346 4.2E-102 T 12-10-2018 IPR014227 Putative transport protein YtvI-like N288_05255 03fb0b8dafb9a6d60e332b413468d430 204 Pfam PF01184 GPR1/FUN34/yaaH family 6 193 3.9E-21 T 12-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 N288_07075 a1c62a9ba1b132c6a9a6b8c73519c33b 101 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 95 2.4E-22 T 12-10-2018 IPR008407 Branched-chain amino acid transport, AzlD N288_13210 f0edbd0a2f4cca670c2fb50526c2c566 323 Pfam PF13536 Putative multidrug resistance efflux transporter 38 300 1.7E-106 T 12-10-2018 IPR032713 Putative multidrug resistance efflux transporter N288_10045 efd319b2e9d5667e004d5d38707e1b76 72 Pfam PF14035 YlzJ-like protein 3 69 4.0E-21 T 12-10-2018 IPR025619 YlzJ-like protein N288_03250 8672726bd6f11622a9244a0760c202cd 204 Pfam PF11181 Heat induced stress protein YflT 9 58 2.8E-12 T 12-10-2018 IPR025889 General stress protein 17M-like domain N288_07200 f0277fa23878f622e6e0196582200989 182 Gene3D G3DSA:3.40.630.30 3 180 4.7E-42 T 12-10-2018 N288_07200 f0277fa23878f622e6e0196582200989 182 SUPERFAMILY SSF55729 3 174 1.21E-43 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_07200 f0277fa23878f622e6e0196582200989 182 Pfam PF13302 Acetyltransferase (GNAT) domain 16 149 5.6E-21 T 12-10-2018 IPR000182 GNAT domain N288_07435 51fe109960cf6490281c7d15b637f1fe 63 Pfam PF12758 Protein of unknown function (DUF3813) 1 60 3.6E-26 T 12-10-2018 IPR024217 Protein of unknown function DUF3813 N288_10420 b9246b32613ff257da87d7e36109bf09 542 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 122 265 5.2E-10 T 12-10-2018 IPR000477 Reverse transcriptase domain N288_16605 b69bdadfc26cfa0d6a34bfd410b42df4 45 TIGRFAM TIGR03093 SASP_sspL: small, acid-soluble spore protein L 9 45 1.2E-18 T 12-10-2018 IPR017526 Small acid-soluble spore protein, SspL N288_01170 ef87fd01ab8b880c867b16a276916b06 271 Pfam PF11181 Heat induced stress protein YflT 9 58 6.3E-11 T 12-10-2018 IPR025889 General stress protein 17M-like domain N288_02415 53e0e584ab03486ede5cb1c3db58dee8 281 SUPERFAMILY SSF52540 1 210 8.09E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase N288_08890 dea4e7d99fbf9fe04bb8210bb223b5a5 102 Pfam PF14036 YlaH-like protein 17 92 4.4E-31 T 12-10-2018 IPR025620 YlaH-like protein N288_04395 3ee73186124e1eb2750e7a892570b895 355 Pfam PF04434 SWIM zinc finger 48 85 2.1E-5 T 12-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 N288_18865 cbbf3ddcf877279bfd6ea689e85b0a6c 97 Pfam PF13797 Post-transcriptional regulator 7 83 1.7E-29 T 12-10-2018 IPR025716 Post-transcriptional regulator N288_10155 c38ecadb8d25164e39883f97dd8a60cb 308 SUPERFAMILY SSF51556 1 305 2.04E-72 T 12-10-2018 IPR032466 Metal-dependent hydrolase N288_10155 c38ecadb8d25164e39883f97dd8a60cb 308 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 2 302 3.0E-85 T 12-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 N288_10155 c38ecadb8d25164e39883f97dd8a60cb 308 Gene3D G3DSA:3.20.20.140 1 306 8.7E-101 T 12-10-2018 N288_10735 35520b6e200cf6ec5ae3eabe9edeb126 327 Gene3D G3DSA:1.10.3720.10 79 327 3.8E-59 T 12-10-2018 IPR035906 MetI-like superfamily N288_10735 35520b6e200cf6ec5ae3eabe9edeb126 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 315 2.3E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 N288_10735 35520b6e200cf6ec5ae3eabe9edeb126 327 SUPERFAMILY SSF161098 83 311 8.9E-49 T 12-10-2018 IPR035906 MetI-like superfamily N288_22360 d88403f9dbc1947888487c659805c112 284 Pfam PF00953 Glycosyl transferase family 4 54 176 4.6E-5 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 N288_22460 21fcc009dac2176535d198492a183056 164 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 150 1.6E-29 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ N288_25110 76e30a8571970d90d3aa8a68e46883b6 335 Pfam PF11553 Protein of unknown function (DUF3231) 170 331 1.8E-49 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_25110 76e30a8571970d90d3aa8a68e46883b6 335 Pfam PF11553 Protein of unknown function (DUF3231) 6 161 2.2E-48 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 N288_25110 76e30a8571970d90d3aa8a68e46883b6 335 Gene3D G3DSA:1.20.1260.10 1 148 1.4E-11 T 12-10-2018 IPR012347 Ferritin-like N288_05675 ff3996dbe32f2d0380e4d3d913ab62b8 84 Pfam PF14182 YgaB-like protein 3 78 1.2E-35 T 12-10-2018 IPR025572 YgaB-like protein N288_21220 a01989d459fc00b9b43ee39a3b4f6223 42 Pfam PF14115 YuzL-like protein 2 42 4.3E-23 T 12-10-2018 IPR025625 YuzL-like protein N288_25075 8b140505b18c52f952bc7734e92ad786 93 Pfam PF14150 YesK-like protein 7 85 5.1E-24 T 12-10-2018 IPR025434 YesK-like protein N288_16630 2c39d12f86eefe59e7f969f9aa860331 249 Pfam PF10127 Predicted nucleotidyltransferase 2 169 2.6E-38 T 12-10-2018 IPR018775 Nucleotidyltransferase, predicted N288_13195 67609728fb36343ade6f262f1bc33ac4 196 Pfam PF08876 Domain of unknown function (DUF1836) 22 124 1.8E-34 T 12-10-2018 IPR014975 Protein of unknown function DUF1836 N288_15755 9223d16981d2e337e3fd665c1b9e3172 87 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 25 85 8.8E-19 T 12-10-2018 IPR018691 Protein of unknown function DUF2188 N288_20035 496b04615399e6ab4b7a0f1ad7701455 92 Pfam PF14165 YtzH-like protein 3 88 1.3E-37 T 12-10-2018 IPR025547 YtzH-like protein N288_14375 94808fc2265bb4be47e6d8623f877629 331 Pfam PF03773 Predicted permease 41 328 3.2E-68 T 12-10-2018 IPR005524 Predicted permease DUF318 N288_16135 f437a7a17b515ff657434ebc1c3d5e90 256 Pfam PF07070 SpoOM protein 4 214 4.9E-80 T 12-10-2018 IPR009776 Sporulation stage 0, protein M N288_07880 579ba5439b54abcd5f5704dff3f69c23 224 Pfam PF04239 Protein of unknown function (DUF421) 87 199 1.0E-29 T 12-10-2018 IPR007353 Protein of unknown function DUF421 N288_07880 579ba5439b54abcd5f5704dff3f69c23 224 Gene3D G3DSA:3.30.240.20 167 224 1.6E-12 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily N288_07880 579ba5439b54abcd5f5704dff3f69c23 224 Gene3D G3DSA:3.30.240.20 79 154 2.2E-25 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily N288_13860 bc2353ed1c08a014559f0412930fdbf6 81 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 3 75 8.4E-28 T 12-10-2018 IPR018680 Protein of unknown function DUF2164 N288_09020 2067594fe59d91c54b061bb1014b9bbf 132 Pfam PF14071 Putative coat protein 12 132 8.2E-39 T 12-10-2018 IPR025953 Putative coat protein YlbD N288_07535 fd55a43e80396463ac24c618fb048dd6 268 SUPERFAMILY SSF51735 1 195 2.87E-5 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily N288_08600 58ad4677561d6fd8a48244c8e21b51d5 155 Pfam PF14177 YkyB-like protein 14 152 1.4E-67 T 12-10-2018 IPR025552 YkyB-like protein N288_16825 e9887d6eea3888529f91f361f2a24aad 328 Pfam PF10720 Protein of unknown function (DUF2515) 18 317 2.0E-129 T 12-10-2018 IPR019658 Protein of unknown function DUF2515 N288_03085 11c365cbde45e90f1639dda48e14e47f 146 Pfam PF12821 Threonine/Serine exporter, ThrE 6 134 7.2E-39 T 12-10-2018 IPR024528 Threonine/Serine exporter, ThrE N288_22650 5bf27bf1dd2b78a7769ead161a572d1e 89 Gene3D G3DSA:2.60.120.10 1 84 5.5E-18 T 12-10-2018 IPR014710 RmlC-like jelly roll fold N288_22650 5bf27bf1dd2b78a7769ead161a572d1e 89 Pfam PF07883 Cupin domain 5 68 4.0E-17 T 12-10-2018 IPR013096 Cupin 2, conserved barrel N288_22650 5bf27bf1dd2b78a7769ead161a572d1e 89 SUPERFAMILY SSF51182 2 77 3.24E-19 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily N288_07315 e129732900cb5abbb89332b0061b637b 364 Pfam PF12698 ABC-2 family transporter protein 21 356 2.4E-34 T 12-10-2018 N288_13295 edde34b91e848cf4e79abf509b55e7dd 43 Pfam PF10055 Uncharacterized small protein (DUF2292) 3 37 1.1E-18 T 12-10-2018 IPR018743 Protein of unknown function DUF2292 N288_15390 c2d497c638b6b6682a077a4a5828997a 251 Pfam PF01925 Sulfite exporter TauE/SafE 5 245 1.5E-38 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 N288_09465 6405a91152e25400abed6455518f754b 120 Pfam PF03780 Asp23 family, cell envelope-related function 10 116 1.3E-36 T 12-10-2018 IPR005531 Alkaline shock protein Asp23 N288_17180 26f9cfa6bcbfde5b30de5084cb73efda 195 PIRSF PIRSF029008 1 195 2.7E-46 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA N288_17180 26f9cfa6bcbfde5b30de5084cb73efda 195 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 89 6.7E-21 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA N288_17180 26f9cfa6bcbfde5b30de5084cb73efda 195 Pfam PF05389 Negative regulator of genetic competence (MecA) 105 191 5.8E-12 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA N288_17180 26f9cfa6bcbfde5b30de5084cb73efda 195 Hamap MF_01124 Adapter protein MecA [mecA]. 1 195 21.617 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA N288_17180 26f9cfa6bcbfde5b30de5084cb73efda 195 Gene3D G3DSA:3.30.70.1950 106 195 1.5E-26 T 12-10-2018 IPR038471 MecA, C-terminal domain superfamily N288_18675 ecb5d805037a126fb975601071a13964 69 Pfam PF10750 Protein of unknown function (DUF2536) 1 67 5.6E-35 T 12-10-2018 IPR019686 Protein of unknown function DUF2536 N288_22545 6784388c32ee78f6d4cbb636b99dcc52 144 Pfam PF04892 VanZ like family 8 127 1.9E-7 T 12-10-2018 IPR006976 VanZ-like N288_13665 621fb86a4593d94aeb3b6d72399aabc2 96 Pfam PF17247 Family of unknown function (DUF5316) 26 94 3.3E-16 T 12-10-2018 IPR035167 Protein of unknown function DUF5316 N288_01355 1c20e5ccde8a81aa965defcf57c3cae2 272 SUPERFAMILY SSF55729 170 266 4.75E-11 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase N288_01355 1c20e5ccde8a81aa965defcf57c3cae2 272 Pfam PF12746 GNAT acetyltransferase 21 266 4.9E-53 T 12-10-2018 IPR027365 GNAT acetyltransferase YdfB-like N288_01355 1c20e5ccde8a81aa965defcf57c3cae2 272 Gene3D G3DSA:3.40.630.30 130 258 2.5E-32 T 12-10-2018 N288_09155 5cc9967ab67add68e3fd74bea0305ad1 119 Hamap MF_00910 Cell division protein FtsL [ftsL]. 36 117 12.828 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 N288_09155 5cc9967ab67add68e3fd74bea0305ad1 119 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 41 112 8.5E-17 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 N288_09155 5cc9967ab67add68e3fd74bea0305ad1 119 Pfam PF04977 Septum formation initiator 45 109 1.7E-10 T 12-10-2018 IPR007060 Septum formation initiator FtsL/DivIC N288_12245 1a35ff8d71cb888b46e8d9359b32bbb3 343 SUPERFAMILY SSF53335 147 333 1.55E-17 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase N288_12245 1a35ff8d71cb888b46e8d9359b32bbb3 343 Pfam PF13489 Methyltransferase domain 160 328 3.5E-8 T 12-10-2018 N288_08925 5cd76920003ecf1941db6c72e915f1d4 165 ProDom PD094668 YLAL SIMILAR MW0994 BH2628 SE0810 SA0960 4 164 5.0E-47 T 12-10-2018 IPR020229 Uncharacterised protein YlaL N288_21050 c02121650ccc9ffb74bca29c6a1c141e 232 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 13 184 4.0E-30 T 12-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like N288_17465 1cb2320ede024749f231125af921de6d 75 Pfam PF14004 Protein of unknown function (DUF4227) 8 75 2.8E-32 T 12-10-2018 IPR025321 Protein of unknown function DUF4227 N288_06835 56fe9f88b20ed16b63c3a92dab8d7013 123 Pfam PF12732 YtxH-like protein 7 85 3.5E-11 T 12-10-2018 IPR024623 Uncharacterised protein family YtxH N288_05600 297563c927b3326dcc2348387e0c2b2d 60 Pfam PF14151 YfhD-like protein 1 58 1.4E-30 T 12-10-2018 IPR025435 YfhD-like protein N288_05600 297563c927b3326dcc2348387e0c2b2d 60 ProDom PD053407 YFHD 1 44 4.0E-13 T 12-10-2018 N288_01930 20aa8e399e8e53ad7c07087a8b4d73a3 451 Pfam PF02386 Cation transport protein 38 431 1.7E-61 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 N288_07415 e767f5889e2b551902e4b36dc5c1076a 43 Pfam PF13081 Domain of unknown function (DUF3941) 18 41 4.4E-12 T 12-10-2018 IPR025077 Protein of unknown function DUF3941 N288_01260 2172e4257fba8d3f5421fe12df2b588c 390 Pfam PF01098 Cell cycle protein 15 380 2.9E-91 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_04895 f77c2451cb0f15161012fd6fd7343956 209 Pfam PF04854 Protein of unknown function, DUF624 16 91 1.0E-27 T 12-10-2018 IPR006938 Protein of unknown function DUF624 N288_06260 2b35b4872b8e03a1e057694022efc7cc 471 Pfam PF04293 SpoVR like protein 5 409 2.6E-164 T 12-10-2018 IPR007390 Sporulation stage V, protein R N288_24855 df39f1b5fde391449c1298554428c793 234 Pfam PF02517 CAAX protease self-immunity 139 225 2.6E-21 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 N288_08350 b17d6e320d7812b980f74d4e2bd5bce4 346 Pfam PF01757 Acyltransferase family 6 307 1.5E-20 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 N288_16975 6e5c086c82d33ab789dc4677d659e866 155 Pfam PF10673 Protein of unknown function (DUF2487) 9 151 3.1E-56 T 12-10-2018 IPR019615 Protein of unknown function DUF2487 N288_21580 37233299b6834901312b5c9fd9a3ca36 322 Pfam PF08378 Nuclease-related domain 41 154 1.2E-20 T 12-10-2018 IPR011528 Nuclease-related domain, NERD N288_04150 a73f14d34c5918223b97a6818210d579 249 Pfam PF12730 ABC-2 family transporter protein 4 179 1.4E-11 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 N288_22085 7edbb8cc884b0b343910b41c8770f793 190 Pfam PF00872 Transposase, Mutator family 11 178 3.4E-42 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 N288_03485 238ab6edaae34ca17c0e8bbf57e8512d 212 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 10 205 1.7E-40 T 12-10-2018 IPR006214 Bax inhibitor 1-related N288_14055 7beabddac42a0a2cfe32ee697c7f478a 428 Pfam PF01098 Cell cycle protein 90 419 5.9E-29 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 N288_06250 5a8d6782cc54d5cf7d161bbfe3f3f402 82 Pfam PF14148 YhdB-like protein 1 70 4.6E-40 T 12-10-2018 IPR025431 YhdB-like protein N288_10870 bcbc045327f07dea5733b916162be9f0 72 Pfam PF11148 Protein of unknown function (DUF2922) 3 68 1.1E-24 T 12-10-2018 IPR021321 Protein of unknown function DUF2922 N288_08330 75645691b43c905b7ffbdecd7d370df0 111 Pfam PF13045 Protein of unknown function (DUF3905) 5 88 4.4E-45 T 12-10-2018 IPR024999 Protein of unknown function DUF3905 N288_01045 a7e77b7324c83374f27530ed7d883260 231 Pfam PF13490 Putative zinc-finger 24 57 5.3E-9 T 12-10-2018 IPR027383 Putative zinc-finger N288_01045 a7e77b7324c83374f27530ed7d883260 231 Gene3D G3DSA:1.10.10.1320 26 112 3.7E-5 T 12-10-2018 N288_17765 f69f252680f751d6c59c9e7173f04785 44 Pfam PF14174 YycC-like protein 1 44 4.7E-26 T 12-10-2018 IPR025550 YycC-like protein N288_11930 a7487944400951e8740bf823771283fc 178 Pfam PF04308 Ribonuclease H-like 23 178 3.5E-51 T 12-10-2018 IPR007405 Bacteriophage KVP40, Orf299 N288_19780 81a97fe92c03022bdce841eb5e50ac3a 167 Pfam PF06271 RDD family 34 158 5.3E-24 T 12-10-2018 IPR010432 RDD N288_12575 ae23d043f8751500fe4dab165d6aef0d 369 Pfam PF01594 AI-2E family transporter 30 349 2.8E-82 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like N288_14790 556ae533d7e1cda3048a6da466454a49 201 Pfam PF09335 SNARE associated Golgi protein 30 160 4.2E-21 T 12-10-2018 IPR032816 SNARE associated Golgi protein N288_23825 16562278029a858e0c46111ac266769e 128 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 86 103 2.8E-6 T 12-10-2018 IPR019626 Stress-induced protein, KGG, repeat N288_23825 16562278029a858e0c46111ac266769e 128 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 66 83 2.8E-6 T 12-10-2018 IPR019626 Stress-induced protein, KGG, repeat N288_23825 16562278029a858e0c46111ac266769e 128 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 46 62 4.6E-6 T 12-10-2018 IPR019626 Stress-induced protein, KGG, repeat N288_23825 16562278029a858e0c46111ac266769e 128 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 106 120 2.1E-4 T 12-10-2018 IPR019626 Stress-induced protein, KGG, repeat N288_23825 16562278029a858e0c46111ac266769e 128 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 26 43 1.8E-6 T 12-10-2018 IPR019626 Stress-induced protein, KGG, repeat N288_13310 9df26bf1ca14d5817f12065a88eb9655 326 Pfam PF01944 Stage II sporulation protein M 109 283 1.3E-41 T 12-10-2018 IPR002798 Stage II sporulation protein M-like N288_03400 97b3ebecb96201e0848bb17c1dfa8863 159 Pfam PF14285 Domain of unknown function (DUF4367) 55 157 1.5E-7 T 12-10-2018 IPR025377 Domain of unknown function DUF4367 N288_00655 b45f7b67cf88408a8e4d1addd1cba5db 169 Pfam PF05991 YacP-like NYN domain 4 166 4.0E-58 T 12-10-2018 IPR010298 Protein of unknown function DUF901 N288_10740 f2a38760abbe2828f31c0a5ab7b8892d 221 Pfam PF04854 Protein of unknown function, DUF624 18 94 7.4E-25 T 12-10-2018 IPR006938 Protein of unknown function DUF624 N288_17855 da819a75c3877fc69caf6346b5e6872b 187 Gene3D G3DSA:3.30.300.270 72 187 8.4E-35 T 12-10-2018 IPR038503 Stage III sporulation protein AH-like superfamily N288_17855 da819a75c3877fc69caf6346b5e6872b 187 Pfam PF12685 SpoIIIAH-like protein 6 172 4.5E-28 T 12-10-2018 IPR024232 Stage III sporulation protein AH-like N288_13540 3007e3f8432ca235c6a12279bbf456ff 252 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 183 249 2.8E-23 T 12-10-2018 IPR018656 Domain of unknown function DUF2087 N288_22995 d67dfb7bad2e5ec9f7e7605215c4f25e 511 Pfam PF13552 Protein of unknown function (DUF4127) 3 499 5.8E-170 T 12-10-2018 IPR025394 Protein of unknown function DUF4127 N288_17115 82c0f2dc4c39055e062247e57f303f6b 47 Pfam PF14140 YpzI-like protein 1 42 1.3E-27 T 12-10-2018 IPR025414 YpzI-like protein N288_07905 7af52c5dbfcaeb73e7a8af83e9c337f8 165 Pfam PF08905 Domain of unknown function (DUF1850) 44 134 1.7E-20 T 12-10-2018 IPR015001 Protein of unknown function DUF1850 N288_19435 2da1f88ef453d4f6387c599fc3abd6b2 179 Pfam PF02674 Colicin V production protein 1 163 2.1E-36 T 12-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 N288_24365 a5e0d76312c7ca2266a71cbaec0cfaee 339 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 328 6.4E-43 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 N288_14015 1a7e3da7fd13fc3afc99f378b6510fad 185 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 23 185 1.5E-52 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT N288_02580 ed0e8a283b0cad5846e84252365ad52a 319 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 124 303 1.5E-43 T 12-10-2018 IPR018728 Domain of unknown function DUF2268 N288_22600 0d897e866265e4f05542ca4705d9923a 211 Pfam PF04854 Protein of unknown function, DUF624 20 97 2.5E-25 T 12-10-2018 IPR006938 Protein of unknown function DUF624 N288_24220 088a17b38d2223b3ca758dd74b5fe447 439 Pfam PF02667 Short chain fatty acid transporter 5 439 8.0E-162 T 12-10-2018 IPR006160 Short chain fatty acid transporter AtoE N288_07070 59cb8e2ee8ca558d7825527ae4640bdb 242 Pfam PF03591 AzlC protein 23 158 3.1E-42 T 12-10-2018 IPR011606 Branched-chain amino acid transport, permease N288_03205 7b69a1fa74ad8e2e77962daef8ba8f23 317 Pfam PF13349 Putative adhesin 47 316 2.4E-56 T 12-10-2018 IPR025164 Putative adhesin N288_24240 c3110eb1c24117eb7f412044ab1ec2f1 438 Pfam PF07670 Nucleoside recognition 125 219 2.0E-8 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 N288_02015 30733cd749cdb9a219cfae5cc417348a 76 Pfam PF12728 Helix-turn-helix domain 2 50 1.0E-7 T 12-10-2018 N288_02015 30733cd749cdb9a219cfae5cc417348a 76 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 2 50 4.3E-14 T 12-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 N288_25010 983b66709182246751ac15e4570a961d 88 Pfam PF10882 Bacterial PH domain 9 71 1.8E-5 T 12-10-2018 IPR027783 Bacterial Pleckstrin homology domain-related N288_17860 29dcb5de594faad62a2fda14e2f6842a 221 TIGRFAM TIGR02830 spore_III_AG: stage III sporulation protein AG 26 216 2.2E-67 T 12-10-2018 IPR014195 Sporulation stage III, protein AG N288_22820 e870a7472b30656e5590724d6b8e63b7 395 Pfam PF11193 Protein of unknown function (DUF2812) 18 119 2.1E-24 T 12-10-2018 IPR021359 Protein of unknown function DUF2812 N288_12025 adcfa19ee1c555ab6143254f37476148 85 Pfam PF10752 Protein of unknown function (DUF2533) 1 83 9.2E-38 T 12-10-2018 IPR019688 Protein of unknown function DUF2533 N288_03550 ac899dbb53baf6800c33da87a701bb42 54 Pfam PF12841 YvrJ protein family 10 44 2.8E-16 T 12-10-2018 IPR024419 Protein of unknown function YvrJ N288_11170 4ddc4c7f1169b897e1dbf5fe8fc2f406 305 Pfam PF08378 Nuclease-related domain 37 143 1.3E-17 T 12-10-2018 IPR011528 Nuclease-related domain, NERD N288_03955 467478c1a08d41745c766a65232c162f 339 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 316 1.4E-49 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 N288_07250 2db413e1a295242dbf75c6f574c4b9d5 73 Pfam PF10676 Spore germination protein gerPA/gerPF 1 72 8.6E-30 T 12-10-2018 IPR019618 Spore germination protein GerPA/GerPF N288_20810 a751463698d71c016f0a0a7038fa1a2d 201 Pfam PF09335 SNARE associated Golgi protein 31 157 2.4E-19 T 12-10-2018 IPR032816 SNARE associated Golgi protein N288_08480 137f2633df40d8310fc9153079e70319 203 Pfam PF02517 CAAX protease self-immunity 106 194 1.2E-16 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 N288_23160 7ffabc6dcfedc7909e9f890f47f81b25 287 Pfam PF16127 Domain of unknown function (DUF4839) 164 286 2.3E-55 T 12-10-2018 IPR032290 Protein of unknown function DUF4839 N288_12720 70eecf839fdd0122c24b5476b3180ecf 242 Pfam PF04519 Polymer-forming cytoskeletal 6 89 1.9E-7 T 12-10-2018 IPR007607 Bactofilin A/B N288_22660 916fc644aaa39369ca37d0574e365ed9 204 Pfam PF00395 S-layer homology domain 89 131 3.5E-13 T 12-10-2018 IPR001119 S-layer homology domain N288_22660 916fc644aaa39369ca37d0574e365ed9 204 Pfam PF00395 S-layer homology domain 150 192 4.1E-13 T 12-10-2018 IPR001119 S-layer homology domain N288_22660 916fc644aaa39369ca37d0574e365ed9 204 Pfam PF00395 S-layer homology domain 30 72 8.9E-18 T 12-10-2018 IPR001119 S-layer homology domain N288_19210 eaba18031d537ca418d92899727836d7 205 ProDom PD104119 YSXD OB2071 ORFY 45 189 3.0E-19 T 12-10-2018