locus-tag class description CKF48_00005 PF00884 Sulfatase CKF48_00015 PF07690 Major Facilitator Superfamily CKF48_00020 PF00440 Bacterial regulatory proteins, tetR family CKF48_00025 PF02898 Nitric oxide synthase, oxygenase domain CKF48_00030 PF04030 D-arabinono-1,4-lactone oxidase CKF48_00030 PF01565 FAD binding domain CKF48_00040 PF00474 Sodium:solute symporter family CKF48_00045 PF04341 Protein of unknown function, DUF485 CKF48_00055 PF11084 Protein of unknown function (DUF2621) CKF48_00060 PF07301 Protein of unknown function (DUF1453) CKF48_00065 PF00072 Response regulator receiver domain CKF48_00070 PF02683 Cytochrome C biogenesis protein transmembrane region CKF48_00080 PF03672 Uncharacterised protein family (UPF0154) CKF48_00085 PF10747 Sporulation inhibitor of replication protein SirA CKF48_00090 PF02779 Transketolase, pyrimidine binding domain CKF48_00090 PF02780 Transketolase, C-terminal domain CKF48_00090 PF00456 Transketolase, thiamine diphosphate binding domain CKF48_00095 PF05979 Bacterial protein of unknown function (DUF896) CKF48_00100 PF00239 Resolvase, N terminal domain CKF48_00105 PF01476 LysM domain CKF48_00110 PF01726 LexA DNA binding domain CKF48_00110 PF00717 Peptidase S24-like CKF48_00115 PF14074 Protein of unknown function (DUF4257) CKF48_00140 PF03951 Glutamine synthetase, beta-Grasp domain CKF48_00140 PF00120 Glutamine synthetase, catalytic domain CKF48_00145 PF13411 MerR HTH family regulatory protein CKF48_00150 PF06838 Methionine gamma-lyase CKF48_00160 PF03458 UPF0126 domain CKF48_00165 PF17866 AAA lid domain CKF48_00165 PF00004 ATPase family associated with various cellular activities (AAA) CKF48_00170 PF17209 Hfq protein CKF48_00185 PF08676 MutL C terminal dimerisation domain CKF48_00185 PF01119 DNA mismatch repair protein, C-terminal domain CKF48_00190 PF05192 MutS domain III CKF48_00190 PF01624 MutS domain I CKF48_00190 PF00488 MutS domain V CKF48_00190 PF05190 MutS family domain IV CKF48_00190 PF05188 MutS domain II CKF48_00195 PF10628 Outer spore coat protein E (CotE) CKF48_00200 PF06133 Control of competence regulator ComK, YlbF/YmcA CKF48_00205 PF01938 TRAM domain CKF48_00205 PF04055 Radical SAM superfamily CKF48_00205 PF00919 Uncharacterized protein family UPF0004 CKF48_00210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CKF48_00215 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CKF48_00215 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CKF48_00215 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CKF48_00220 PF01244 Membrane dipeptidase (Peptidase family M19) CKF48_00225 PF04232 Stage V sporulation protein S (SpoVS) CKF48_00230 PF13277 YmdB-like protein CKF48_00235 PF00013 KH domain CKF48_00235 PF01966 HD domain CKF48_00235 PF12072 Domain of unknown function (DUF3552) CKF48_00240 PF00154 recA bacterial DNA recombination protein CKF48_00245 PF18146 Damage-inducible protein CinA KH domain CKF48_00245 PF02464 Competence-damaged protein CKF48_00245 PF00994 Probable molybdopterin binding domain CKF48_00250 PF01066 CDP-alcohol phosphatidyltransferase CKF48_00255 PF13464 Domain of unknown function (DUF4115) CKF48_00260 PF11868 Protein of unknown function (DUF3388) CKF48_00265 PF11588 Protein of unknown function (DUF3243) CKF48_00275 PF00675 Insulinase (Peptidase family M16) CKF48_00275 PF05193 Peptidase M16 inactive domain CKF48_00280 PF05193 Peptidase M16 inactive domain CKF48_00305 PF00392 Bacterial regulatory proteins, gntR family CKF48_00305 PF07702 UTRA domain CKF48_00310 PF01580 FtsK/SpoIIIE family CKF48_00310 PF09397 Ftsk gamma domain CKF48_00310 PF17854 FtsK alpha domain CKF48_00320 PF00574 Clp protease CKF48_00325 PF17770 Ribonuclease J C-terminal domain CKF48_00325 PF00753 Metallo-beta-lactamase superfamily CKF48_00325 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CKF48_00330 PF00701 Dihydrodipicolinate synthetase family CKF48_00335 PF13840 ACT domain CKF48_00335 PF00696 Amino acid kinase family CKF48_00340 PF01118 Semialdehyde dehydrogenase, NAD binding domain CKF48_00340 PF02774 Semialdehyde dehydrogenase, dimerisation domain CKF48_00345 PF02441 Flavoprotein CKF48_00350 PF16924 Dipicolinate synthase subunit A N-terminal domain CKF48_00350 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CKF48_00360 PF00675 Insulinase (Peptidase family M16) CKF48_00360 PF05193 Peptidase M16 inactive domain CKF48_00365 PF01522 Polysaccharide deacetylase CKF48_00370 PF03725 3' exoribonuclease family, domain 2 CKF48_00370 PF00013 KH domain CKF48_00370 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CKF48_00370 PF01138 3' exoribonuclease family, domain 1 CKF48_00370 PF00575 S1 RNA binding domain CKF48_00375 PF00312 Ribosomal protein S15 CKF48_00380 PF01687 Riboflavin kinase CKF48_00380 PF06574 FAD synthetase CKF48_00385 PF16198 tRNA pseudouridylate synthase B C-terminal domain CKF48_00385 PF01509 TruB family pseudouridylate synthase (N terminal domain) CKF48_00390 PF02033 Ribosome-binding factor A CKF48_00395 PF04456 Protein of unknown function (DUF503) CKF48_00400 PF04760 Translation initiation factor IF-2, N-terminal region CKF48_00400 PF11987 Translation-initiation factor 2 CKF48_00400 PF00009 Elongation factor Tu GTP binding domain CKF48_00405 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CKF48_00410 PF04296 Protein of unknown function (DUF448) CKF48_00420 PF17384 RimP C-terminal SH3 domain CKF48_00420 PF02576 RimP N-terminal domain CKF48_00425 PF02811 PHP domain CKF48_00425 PF00929 Exonuclease CKF48_00425 PF14579 Helix-hairpin-helix motif CKF48_00425 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CKF48_00425 PF11490 DNA polymerase III polC-type N-terminus II CKF48_00425 PF14480 DNA polymerase III polC-type N-terminus I CKF48_00425 PF07733 Bacterial DNA polymerase III alpha NTPase domain CKF48_00430 PF04073 Aminoacyl-tRNA editing domain CKF48_00430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CKF48_00430 PF03129 Anticodon binding domain CKF48_00435 PF02163 Peptidase family M50 CKF48_00435 PF13180 PDZ domain CKF48_00440 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CKF48_00440 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CKF48_00440 PF13288 DXP reductoisomerase C-terminal domain CKF48_00450 PF01255 Putative undecaprenyl diphosphate synthase CKF48_00455 PF01765 Ribosome recycling factor CKF48_00460 PF00696 Amino acid kinase family CKF48_00465 PF00889 Elongation factor TS CKF48_00470 PF00318 Ribosomal protein S2 CKF48_00485 PF04539 Sigma-70 region 3 CKF48_00485 PF04545 Sigma-70, region 4 CKF48_00485 PF04542 Sigma-70 region 2 CKF48_00490 PF03975 CheD chemotactic sensory transduction CKF48_00495 PF04509 CheC-like family CKF48_00500 PF01584 CheW-like domain CKF48_00505 PF01584 CheW-like domain CKF48_00505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_00505 PF01627 Hpt domain CKF48_00505 PF02895 Signal transducing histidine kinase, homodimeric domain CKF48_00505 PF07194 P2 response regulator binding domain CKF48_00510 PF00072 Response regulator receiver domain CKF48_00510 PF01339 CheB methylesterase CKF48_00515 PF10609 NUBPL iron-transfer P-loop NTPase CKF48_00520 PF00448 SRP54-type protein, GTPase domain CKF48_00525 PF00771 FHIPEP family CKF48_00530 PF01312 FlhB HrpN YscU SpaS Family CKF48_00535 PF01311 Bacterial export proteins, family 1 CKF48_00540 PF01313 Bacterial export proteins, family 3 CKF48_00545 PF00813 FliP family CKF48_00550 PF04347 Flagellar biosynthesis protein, FliO CKF48_00555 PF00072 Response regulator receiver domain CKF48_00560 PF04509 CheC-like family CKF48_00560 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CKF48_00565 PF02154 Flagellar motor switch protein FliM CKF48_00565 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CKF48_00570 PF03748 Flagellar basal body-associated protein FliL CKF48_00575 PF06289 Flagellar and Swarming motility proteins CKF48_00580 PF00460 Flagella basal body rod protein CKF48_00580 PF07559 Flagellar basal body protein FlaE CKF48_00580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CKF48_00585 PF03963 Flagellar hook capping protein - N-terminal region CKF48_00600 PF02050 Flagellar FliJ protein CKF48_00605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CKF48_00605 PF02874 ATP synthase alpha/beta family, beta-barrel domain CKF48_00605 PF18269 T3SS EscN ATPase C-terminal domain CKF48_00615 PF01706 FliG C-terminal domain CKF48_00615 PF14842 FliG N-terminal domain CKF48_00615 PF14841 FliG middle domain CKF48_00620 PF08345 Flagellar M-ring protein C-terminal CKF48_00620 PF01514 Secretory protein of YscJ/FliF family CKF48_00625 PF02049 Flagellar hook-basal body complex protein FliE CKF48_00630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CKF48_00630 PF00460 Flagella basal body rod protein CKF48_00635 PF00460 Flagella basal body rod protein CKF48_00640 PF06018 CodY GAF-like domain CKF48_00640 PF08222 CodY helix-turn-helix domain CKF48_00645 PF00004 ATPase family associated with various cellular activities (AAA) CKF48_00645 PF07724 AAA domain (Cdc48 subfamily) CKF48_00645 PF10431 C-terminal, D2-small domain, of ClpB protein CKF48_00650 PF00227 Proteasome subunit CKF48_00655 PF02899 Phage integrase, N-terminal SAM-like domain CKF48_00655 PF00589 Phage integrase family CKF48_00660 PF01134 Glucose inhibited division protein A CKF48_00670 PF02481 DNA recombination-mediator protein A CKF48_00675 PF02629 CoA binding domain CKF48_00675 PF00549 CoA-ligase CKF48_00695 PF01351 Ribonuclease HII CKF48_00700 PF01926 50S ribosome-binding GTPase CKF48_00705 PF10502 Signal peptidase, peptidase S26 CKF48_00710 PF01245 Ribosomal protein L19 CKF48_00715 PF01746 tRNA (Guanine-1)-methyltransferase CKF48_00720 PF01782 RimM N-terminal domain CKF48_00720 PF05239 PRC-barrel domain CKF48_00725 PF11068 YlqD protein CKF48_00735 PF00886 Ribosomal protein S16 CKF48_00740 PF02881 SRP54-type protein, helical bundle domain CKF48_00740 PF00448 SRP54-type protein, GTPase domain CKF48_00740 PF02978 Signal peptide binding domain CKF48_00745 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CKF48_00750 PF02881 SRP54-type protein, helical bundle domain CKF48_00750 PF00448 SRP54-type protein, GTPase domain CKF48_00755 PF02463 RecF/RecN/SMC N terminal domain CKF48_00755 PF06470 SMC proteins Flexible Hinge Domain CKF48_00760 PF00035 Double-stranded RNA binding motif CKF48_00760 PF14622 Ribonuclease-III-like CKF48_00765 PF00550 Phosphopantetheine attachment site CKF48_00775 PF00698 Acyl transferase domain CKF48_00780 PF02504 Fatty acid synthesis protein CKF48_00785 PF08279 HTH domain CKF48_00785 PF01575 MaoC like domain CKF48_00790 PF00270 DEAD/DEAH box helicase CKF48_00790 PF00271 Helicase conserved C-terminal domain CKF48_00790 PF17191 RecG wedge domain CKF48_00795 PF13684 Dihydroxyacetone kinase family CKF48_00795 PF02734 DAK2 domain CKF48_00800 PF03780 Asp23 family, cell envelope-related function CKF48_00805 PF00830 Ribosomal L28 family CKF48_00810 PF08183 Stage V sporulation protein family CKF48_00815 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CKF48_00815 PF04263 Thiamin pyrophosphokinase, catalytic domain CKF48_00825 PF03193 RsgA GTPase CKF48_00825 PF16745 RsgA N-terminal domain CKF48_00830 PF00069 Protein kinase domain CKF48_00830 PF03793 PASTA domain CKF48_00840 PF04055 Radical SAM superfamily CKF48_00845 PF01189 16S rRNA methyltransferase RsmB/F CKF48_00845 PF01029 NusB family CKF48_00850 PF00551 Formyl transferase CKF48_00850 PF02911 Formyl transferase, C-terminal domain CKF48_00855 PF01327 Polypeptide deformylase CKF48_00860 PF17764 3′ DNA-binding domain (3′BD) CKF48_00860 PF00271 Helicase conserved C-terminal domain CKF48_00860 PF04851 Type III restriction enzyme, res subunit CKF48_00860 PF18074 Primosomal protein N C-terminal domain CKF48_00860 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CKF48_00865 PF04127 DNA / pantothenate metabolism flavoprotein CKF48_00865 PF02441 Flavoprotein CKF48_00870 PF01192 RNA polymerase Rpb6 CKF48_00875 PF00625 Guanylate kinase CKF48_00880 PF04025 Domain of unknown function (DUF370) CKF48_00885 PF08340 Domain of unknown function (DUF1732) CKF48_00885 PF03755 YicC-like family, N-terminal region CKF48_00910 PF00196 Bacterial regulatory proteins, luxR family CKF48_00910 PF00072 Response regulator receiver domain CKF48_00915 PF00156 Phosphoribosyl transferase domain CKF48_00920 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CKF48_00925 PF01180 Dihydroorotate dehydrogenase CKF48_00930 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CKF48_00930 PF00970 Oxidoreductase FAD-binding domain CKF48_00935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CKF48_00935 PF02142 MGS-like domain CKF48_00935 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CKF48_00940 PF00117 Glutamine amidotransferase class-I CKF48_00940 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CKF48_00945 PF01979 Amidohydrolase family CKF48_00950 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CKF48_00950 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CKF48_00955 PF00860 Permease family CKF48_00960 PF00156 Phosphoribosyl transferase domain CKF48_00965 PF00849 RNA pseudouridylate synthase CKF48_00965 PF01479 S4 domain CKF48_00970 PF01252 Signal peptidase (SPase) II CKF48_00980 PF00133 tRNA synthetases class I (I, L, M and V) CKF48_00980 PF06827 Zinc finger found in FPG and IleRS CKF48_00980 PF08264 Anticodon-binding domain of tRNA CKF48_00985 PF05103 DivIVA protein CKF48_00990 PF17774 Putative RNA-binding domain in YlmH CKF48_00990 PF01479 S4 domain CKF48_00995 PF02325 YGGT family CKF48_01000 PF04472 Cell division protein SepF CKF48_01005 PF01168 Alanine racemase, N-terminal domain CKF48_01015 PF05239 PRC-barrel domain CKF48_01020 PF04539 Sigma-70 region 3 CKF48_01020 PF04542 Sigma-70 region 2 CKF48_01020 PF04545 Sigma-70, region 4 CKF48_01025 PF04545 Sigma-70, region 4 CKF48_01025 PF04542 Sigma-70 region 2 CKF48_01030 PF03419 Sporulation factor SpoIIGA CKF48_01035 PF00091 Tubulin/FtsZ family, GTPase domain CKF48_01035 PF12327 FtsZ family, C-terminal domain CKF48_01040 PF02491 SHS2 domain inserted in FTSA CKF48_01045 PF06947 Protein of unknown function (DUF1290) CKF48_01050 PF05949 Bacterial protein of unknown function (DUF881) CKF48_01055 PF05949 Bacterial protein of unknown function (DUF881) CKF48_01060 PF08478 POTRA domain, FtsQ-type CKF48_01065 PF01565 FAD binding domain CKF48_01065 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CKF48_01070 PF03033 Glycosyltransferase family 28 N-terminal domain CKF48_01070 PF04101 Glycosyltransferase family 28 C-terminal domain CKF48_01075 PF01098 Cell cycle protein CKF48_01085 PF00953 Glycosyl transferase family 4 CKF48_01085 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CKF48_01090 PF01225 Mur ligase family, catalytic domain CKF48_01090 PF02875 Mur ligase family, glutamate ligase domain CKF48_01090 PF08245 Mur ligase middle domain CKF48_01095 PF03793 PASTA domain CKF48_01095 PF03717 Penicillin-binding Protein dimerisation domain CKF48_01095 PF00905 Penicillin binding protein transpeptidase domain CKF48_01105 PF04977 Septum formation initiator CKF48_01110 PF01795 MraW methylase family CKF48_01115 PF02381 MraZ protein, putative antitoxin-like CKF48_01120 PF10079 Bacillithiol biosynthesis BshC CKF48_01130 PF02558 Ketopantoate reductase PanE/ApbA CKF48_01130 PF08546 Ketopantoate reductase PanE/ApbA C terminal CKF48_01145 PF00364 Biotin-requiring enzyme CKF48_01150 PF02785 Biotin carboxylase C-terminal domain CKF48_01150 PF00289 Biotin carboxylase, N-terminal domain CKF48_01150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CKF48_01155 PF13508 Acetyltransferase (GNAT) domain CKF48_01165 PF00378 Enoyl-CoA hydratase/isomerase CKF48_01170 PF01783 Ribosomal L32p protein family CKF48_01175 PF02620 Large ribosomal RNA subunit accumulation protein YceD CKF48_01190 PF13180 PDZ domain CKF48_01190 PF05362 Lon protease (S16) C-terminal proteolytic domain CKF48_01195 PF01734 Patatin-like phospholipase CKF48_01200 PF07670 Nucleoside recognition CKF48_01205 PF01467 Cytidylyltransferase-like CKF48_01225 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CKF48_01230 PF06133 Control of competence regulator ComK, YlbF/YmcA CKF48_01255 PF14504 CAP-associated N-terminal CKF48_01255 PF00188 Cysteine-rich secretory protein family CKF48_01260 PF08868 YugN-like family CKF48_01275 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CKF48_01280 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CKF48_01285 PF00510 Cytochrome c oxidase subunit III CKF48_01290 PF00115 Cytochrome C and Quinol oxidase polypeptide I CKF48_01295 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CKF48_01295 PF00034 Cytochrome c CKF48_01295 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CKF48_01300 PF02628 Cytochrome oxidase assembly protein CKF48_01305 PF02436 Conserved carboxylase domain CKF48_01305 PF02785 Biotin carboxylase C-terminal domain CKF48_01305 PF00289 Biotin carboxylase, N-terminal domain CKF48_01305 PF00364 Biotin-requiring enzyme CKF48_01305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CKF48_01305 PF00682 HMGL-like CKF48_01310 PF01098 Cell cycle protein CKF48_01315 PF07408 Protein of unknown function (DUF1507) CKF48_01320 PF04960 Glutaminase CKF48_01330 PF13638 PIN domain CKF48_01330 PF02562 PhoH-like protein CKF48_01335 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CKF48_01340 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) CKF48_01355 PF14036 YlaH-like protein CKF48_01365 PF17259 Family of unknown function (DUF5325) CKF48_01370 PF00459 Inositol monophosphatase family CKF48_01380 PF06335 Protein of unknown function (DUF1054) CKF48_01385 PF05256 Uncharacterised protein family (UPF0223) CKF48_01390 PF01276 Orn/Lys/Arg decarboxylase, major domain CKF48_01390 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CKF48_01415 PF01522 Polysaccharide deacetylase CKF48_01425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CKF48_01425 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKF48_01430 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CKF48_01430 PF00364 Biotin-requiring enzyme CKF48_01430 PF02817 e3 binding domain CKF48_01435 PF02780 Transketolase, C-terminal domain CKF48_01435 PF02779 Transketolase, pyrimidine binding domain CKF48_01440 PF00676 Dehydrogenase E1 component CKF48_01455 PF01327 Polypeptide deformylase CKF48_01470 PF17770 Ribonuclease J C-terminal domain CKF48_01470 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CKF48_01470 PF00753 Metallo-beta-lactamase superfamily CKF48_01475 PF02254 TrkA-N domain CKF48_01475 PF02080 TrkA-C domain CKF48_01480 PF00578 AhpC/TSA family CKF48_01485 PF10417 C-terminal domain of 1-Cys peroxiredoxin CKF48_01485 PF00578 AhpC/TSA family CKF48_01490 PF01546 Peptidase family M20/M25/M40 CKF48_01490 PF07687 Peptidase dimerisation domain CKF48_01495 PF14602 Hexapeptide repeat of succinyl-transferase CKF48_01495 PF00132 Bacterial transferase hexapeptide (six repeats) CKF48_01495 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CKF48_01500 PF03466 LysR substrate binding domain CKF48_01500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKF48_01515 PF08796 Protein of unknown function (DUF1797) CKF48_01530 PF00563 EAL domain CKF48_01530 PF10388 EAL-domain associated signalling protein domain CKF48_01535 PF10518 TAT (twin-arginine translocation) pathway signal sequence CKF48_01535 PF00149 Calcineurin-like phosphoesterase CKF48_01545 PF14177 YkyB-like protein CKF48_01550 PF01584 CheW-like domain CKF48_01550 PF00072 Response regulator receiver domain CKF48_01560 PF00155 Aminotransferase class I and II CKF48_01565 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CKF48_01565 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CKF48_01575 PF04143 Sulphur transport CKF48_01580 PF01206 Sulfurtransferase TusA CKF48_01585 PF00391 PEP-utilising enzyme, mobile domain CKF48_01585 PF02896 PEP-utilising enzyme, TIM barrel domain CKF48_01585 PF05524 PEP-utilising enzyme, N-terminal CKF48_01590 PF00381 PTS HPr component phosphorylation site CKF48_01600 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) CKF48_01620 PF10431 C-terminal, D2-small domain, of ClpB protein CKF48_01620 PF17871 AAA lid domain CKF48_01620 PF07724 AAA domain (Cdc48 subfamily) CKF48_01620 PF00004 ATPase family associated with various cellular activities (AAA) CKF48_01630 PF01047 MarR family CKF48_01635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_01635 PF00512 His Kinase A (phospho-acceptor) domain CKF48_01635 PF02743 Cache domain CKF48_01640 PF07690 Major Facilitator Superfamily CKF48_01645 PF02535 ZIP Zinc transporter CKF48_01655 PF00795 Carbon-nitrogen hydrolase CKF48_01660 PF01022 Bacterial regulatory protein, arsR family CKF48_01665 PF13426 PAS domain CKF48_01665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_01665 PF00512 His Kinase A (phospho-acceptor) domain CKF48_01665 PF13188 PAS domain CKF48_01665 PF00989 PAS fold CKF48_01670 PF00672 HAMP domain CKF48_01670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKF48_01670 PF12729 Four helix bundle sensory module for signal transduction CKF48_01675 PF01757 Acyltransferase family CKF48_01720 PF00269 Small, acid-soluble spore proteins, alpha/beta type CKF48_01725 PF12791 Anti-sigma factor N-terminus CKF48_01730 PF04542 Sigma-70 region 2 CKF48_01740 PF16658 Class II release factor RF3, C-terminal domain CKF48_01740 PF00009 Elongation factor Tu GTP binding domain CKF48_01740 PF03144 Elongation factor Tu domain 2 CKF48_01745 PF02416 mttA/Hcf106 family CKF48_01750 PF07486 Cell Wall Hydrolase CKF48_01755 PF08281 Sigma-70, region 4 CKF48_01755 PF04542 Sigma-70 region 2 CKF48_01760 PF00082 Subtilase family CKF48_01760 PF05922 Peptidase inhibitor I9 CKF48_01770 PF09680 Family of unknown function CKF48_01780 PF12802 MarR family CKF48_01785 PF00005 ABC transporter CKF48_01785 PF00571 CBS domain CKF48_01790 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_01795 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CKF48_01800 PF01145 SPFH domain / Band 7 family CKF48_01800 PF15975 Flotillin CKF48_01815 PF03009 Glycerophosphoryl diester phosphodiesterase family CKF48_01820 PF01225 Mur ligase family, catalytic domain CKF48_01820 PF02875 Mur ligase family, glutamate ligase domain CKF48_01820 PF08245 Mur ligase middle domain CKF48_01825 PF01225 Mur ligase family, catalytic domain CKF48_01825 PF08245 Mur ligase middle domain CKF48_01825 PF02875 Mur ligase family, glutamate ligase domain CKF48_01835 PF02554 Carbon starvation protein CstA CKF48_01845 PF00072 Response regulator receiver domain CKF48_01845 PF00196 Bacterial regulatory proteins, luxR family CKF48_01850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_01850 PF07730 Histidine kinase CKF48_01860 PF00005 ABC transporter CKF48_01875 PF00909 Ammonium Transporter Family CKF48_01880 PF00269 Small, acid-soluble spore proteins, alpha/beta type CKF48_01895 PF04070 Domain of unknown function (DUF378) CKF48_01905 PF11553 Protein of unknown function (DUF3231) CKF48_01915 PF00756 Putative esterase CKF48_01925 PF13673 Acetyltransferase (GNAT) domain CKF48_01930 PF04239 Protein of unknown function (DUF421) CKF48_01940 PF13361 UvrD-like helicase C-terminal domain CKF48_01940 PF00580 UvrD/REP helicase N-terminal domain CKF48_01945 PF14069 Stage VI sporulation protein F CKF48_01955 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CKF48_01960 PF07451 Stage V sporulation protein AD (SpoVAD) CKF48_01965 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CKF48_01975 PF07098 Protein of unknown function (DUF1360) CKF48_01980 PF10612 Spore coat protein Z CKF48_02000 PF02254 TrkA-N domain CKF48_02000 PF00999 Sodium/hydrogen exchanger family CKF48_02000 PF02080 TrkA-C domain CKF48_02005 PF00149 Calcineurin-like phosphoesterase CKF48_02010 PF00849 RNA pseudouridylate synthase CKF48_02015 PF01513 ATP-NAD kinase CKF48_02020 PF04607 Region found in RelA / SpoT proteins CKF48_02030 PF01928 CYTH domain CKF48_02035 PF01464 Transglycosylase SLT domain CKF48_02035 PF01551 Peptidase family M23 CKF48_02035 PF10145 Phage-related minor tail protein CKF48_02040 PF01152 Bacterial-like globin CKF48_02050 PF01432 Peptidase family M3 CKF48_02050 PF08439 Oligopeptidase F CKF48_02060 PF05389 Negative regulator of genetic competence (MecA) CKF48_02065 PF03960 ArsC family CKF48_02070 PF13508 Acetyltransferase (GNAT) domain CKF48_02085 PF00005 ABC transporter CKF48_02085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_02090 PF00005 ABC transporter CKF48_02090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_02095 PF12911 N-terminal TM domain of oligopeptide transport permease C CKF48_02095 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_02100 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_02105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKF48_02110 PF00579 tRNA synthetases class I (W and Y) CKF48_02115 PF12227 Protein of unknown function (DUF3603) CKF48_02120 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_02120 PF12911 N-terminal TM domain of oligopeptide transport permease C CKF48_02125 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_02130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKF48_02135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_02135 PF00005 ABC transporter CKF48_02140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_02140 PF00005 ABC transporter CKF48_02145 PF10026 Predicted Zn-dependent protease (DUF2268) CKF48_02150 PF00109 Beta-ketoacyl synthase, N-terminal domain CKF48_02150 PF02801 Beta-ketoacyl synthase, C-terminal domain CKF48_02155 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CKF48_02155 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CKF48_02165 PF10815 ComZ CKF48_02170 PF02608 ABC transporter substrate-binding protein PnrA-like CKF48_02190 PF10431 C-terminal, D2-small domain, of ClpB protein CKF48_02190 PF02861 Clp amino terminal domain, pathogenicity island component CKF48_02190 PF17871 AAA lid domain CKF48_02190 PF07724 AAA domain (Cdc48 subfamily) CKF48_02190 PF00004 ATPase family associated with various cellular activities (AAA) CKF48_02195 PF14168 YjzC-like protein CKF48_02200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CKF48_02200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CKF48_02205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CKF48_02205 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CKF48_02210 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CKF48_02210 PF00117 Glutamine amidotransferase class-I CKF48_02215 PF00202 Aminotransferase class-III CKF48_02220 PF00696 Amino acid kinase family CKF48_02225 PF01960 ArgJ family CKF48_02230 PF01118 Semialdehyde dehydrogenase, NAD binding domain CKF48_02230 PF02774 Semialdehyde dehydrogenase, dimerisation domain CKF48_02235 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CKF48_02240 PF03454 MoeA C-terminal region (domain IV) CKF48_02240 PF03453 MoeA N-terminal region (domain I and II) CKF48_02240 PF00994 Probable molybdopterin binding domain CKF48_02245 PF04055 Radical SAM superfamily CKF48_02245 PF06463 Molybdenum Cofactor Synthesis C CKF48_02250 PF01883 Iron-sulfur cluster assembly protein CKF48_02255 PF00326 Prolyl oligopeptidase family CKF48_02270 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CKF48_02270 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CKF48_02275 PF02645 Uncharacterised protein, DegV family COG1307 CKF48_02285 PF13509 S1 domain CKF48_02285 PF17783 CvfB-like winged helix domain CKF48_02290 PF04461 Protein of unknown function (DUF520) CKF48_02300 PF00128 Alpha amylase, catalytic domain CKF48_02305 PF00733 Asparagine synthase CKF48_02305 PF13537 Glutamine amidotransferase domain CKF48_02315 PF00990 Diguanylate cyclase, GGDEF domain CKF48_02315 PF03707 Bacterial signalling protein N terminal repeat CKF48_02315 PF00563 EAL domain CKF48_02320 PF07457 Protein of unknown function (DUF1516) CKF48_02325 PF01557 Fumarylacetoacetate (FAA) hydrolase family CKF48_02330 PF04235 Protein of unknown function (DUF418) CKF48_02335 PF00501 AMP-binding enzyme CKF48_02335 PF13193 AMP-binding enzyme C-terminal domain CKF48_02340 PF10676 Spore germination protein gerPA/gerPF CKF48_02345 PF10803 Spore germination GerPB CKF48_02350 PF10737 Spore germination protein GerPC CKF48_02365 PF10676 Spore germination protein gerPA/gerPF CKF48_02370 PF00580 UvrD/REP helicase N-terminal domain CKF48_02370 PF12705 PD-(D/E)XK nuclease superfamily CKF48_02370 PF13361 UvrD-like helicase C-terminal domain CKF48_02375 PF13361 UvrD-like helicase C-terminal domain CKF48_02375 PF12705 PD-(D/E)XK nuclease superfamily CKF48_02380 PF09335 SNARE associated Golgi protein CKF48_02385 PF03816 Cell envelope-related transcriptional attenuator domain CKF48_02390 PF07676 WD40-like Beta Propeller Repeat CKF48_02390 PF00326 Prolyl oligopeptidase family CKF48_02400 PF06338 ComK protein CKF48_02410 PF01435 Peptidase family M48 CKF48_02410 PF16491 CAAX prenyl protease N-terminal, five membrane helices CKF48_02420 PF03591 AzlC protein CKF48_02425 PF07883 Cupin domain CKF48_02425 PF01381 Helix-turn-helix CKF48_02430 PF01047 MarR family CKF48_02435 PF01479 S4 domain CKF48_02435 PF00579 tRNA synthetases class I (W and Y) CKF48_02440 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CKF48_02440 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CKF48_02445 PF05995 Cysteine dioxygenase type I CKF48_02450 PF02082 Transcriptional regulator CKF48_02455 PF00005 ABC transporter CKF48_02470 PF00302 Chloramphenicol acetyltransferase CKF48_02480 PF03992 Antibiotic biosynthesis monooxygenase CKF48_02485 PF00005 ABC transporter CKF48_02490 PF01032 FecCD transport family CKF48_02495 PF01497 Periplasmic binding protein CKF48_02500 PF04203 Sortase domain CKF48_02505 PF00005 ABC transporter CKF48_02510 PF01032 FecCD transport family CKF48_02515 PF01497 Periplasmic binding protein CKF48_02520 PF05031 Iron Transport-associated domain CKF48_02530 PF00378 Enoyl-CoA hydratase/isomerase CKF48_02535 PF12697 Alpha/beta hydrolase family CKF48_02540 PF03358 NADPH-dependent FMN reductase CKF48_02545 PF00296 Luciferase-like monooxygenase CKF48_02560 PF12146 Serine aminopeptidase, S33 CKF48_02565 PF03180 NLPA lipoprotein CKF48_02570 PF00296 Luciferase-like monooxygenase CKF48_02575 PF13193 AMP-binding enzyme C-terminal domain CKF48_02575 PF00501 AMP-binding enzyme CKF48_02580 PF10437 Bacterial lipoate protein ligase C-terminus CKF48_02580 PF03099 Biotin/lipoate A/B protein ligase family CKF48_02590 PF14149 YhfH-like protein CKF48_02595 PF17932 Tetracyclin repressor-like, C-terminal domain CKF48_02595 PF00440 Bacterial regulatory proteins, tetR family CKF48_02605 PF01208 Uroporphyrinogen decarboxylase (URO-D) CKF48_02610 PF03992 Antibiotic biosynthesis monooxygenase CKF48_02620 PF12787 EcsC protein family CKF48_02625 PF05975 Bacterial ABC transporter protein EcsB CKF48_02630 PF00005 ABC transporter CKF48_02635 PF01230 HIT domain CKF48_02640 PF00266 Aminotransferase class-V CKF48_02645 PF17099 Tryptophan transporter TrpP CKF48_02655 PF01047 MarR family CKF48_02680 PF05698 Bacterial trigger factor protein (TF) C-terminus CKF48_02690 PF01966 HD domain CKF48_02690 PF01336 OB-fold nucleic acid binding domain CKF48_02695 PF13514 AAA domain CKF48_02700 PF00149 Calcineurin-like phosphoesterase CKF48_02705 PF00196 Bacterial regulatory proteins, luxR family CKF48_02705 PF00072 Response regulator receiver domain CKF48_02710 PF07730 Histidine kinase CKF48_02725 PF00005 ABC transporter CKF48_02745 PF00378 Enoyl-CoA hydratase/isomerase CKF48_02755 PF04055 Radical SAM superfamily CKF48_02765 PF06133 Control of competence regulator ComK, YlbF/YmcA CKF48_02770 PF04286 Protein of unknown function (DUF445) CKF48_02775 PF04286 Protein of unknown function (DUF445) CKF48_02780 PF14398 YheC/D like ATP-grasp CKF48_02785 PF14398 YheC/D like ATP-grasp CKF48_02790 PF14398 YheC/D like ATP-grasp CKF48_02810 PF02583 Metal-sensitive transcriptional repressor CKF48_02815 PF00269 Small, acid-soluble spore proteins, alpha/beta type CKF48_02820 PF10415 Fumarase C C-terminus CKF48_02820 PF00206 Lyase CKF48_02830 PF00905 Penicillin binding protein transpeptidase domain CKF48_02830 PF00912 Transglycosylase CKF48_02835 PF00582 Universal stress protein family CKF48_02845 PF00375 Sodium:dicarboxylate symporter family CKF48_02850 PF13302 Acetyltransferase (GNAT) domain CKF48_02855 PF01595 Cyclin M transmembrane N-terminal domain CKF48_02855 PF00571 CBS domain CKF48_02855 PF03471 Transporter associated domain CKF48_02860 PF00672 HAMP domain CKF48_02860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_02860 PF00512 His Kinase A (phospho-acceptor) domain CKF48_02865 PF00486 Transcriptional regulatory protein, C terminal CKF48_02865 PF00072 Response regulator receiver domain CKF48_02870 PF01022 Bacterial regulatory protein, arsR family CKF48_02875 PF16916 Dimerisation domain of Zinc Transporter CKF48_02875 PF01545 Cation efflux family CKF48_02880 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CKF48_02880 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CKF48_02885 PF04293 SpoVR like protein CKF48_02895 PF14148 YhdB-like protein CKF48_02900 PF00196 Bacterial regulatory proteins, luxR family CKF48_02900 PF00072 Response regulator receiver domain CKF48_02905 PF13185 GAF domain CKF48_02905 PF07730 Histidine kinase CKF48_02910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CKF48_02910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CKF48_02910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CKF48_02910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CKF48_02915 PF00583 Acetyltransferase (GNAT) family CKF48_02915 PF00795 Carbon-nitrogen hydrolase CKF48_02920 PF02600 Disulfide bond formation protein DsbB CKF48_02930 PF17326 Family of unknown function (DUF5365) CKF48_02935 PF01479 S4 domain CKF48_02935 PF00849 RNA pseudouridylate synthase CKF48_02940 PF04226 Transglycosylase associated protein CKF48_02945 PF00248 Aldo/keto reductase family CKF48_02950 PF13538 UvrD-like helicase C-terminal domain CKF48_02955 PF01865 Protein of unknown function DUF47 CKF48_02960 PF01384 Phosphate transporter family CKF48_02965 PF00860 Permease family CKF48_02970 PF00375 Sodium:dicarboxylate symporter family CKF48_02975 PF03807 NADP oxidoreductase coenzyme F420-dependent CKF48_02975 PF14748 Pyrroline-5-carboxylate reductase dimerisation CKF48_02980 PF00873 AcrB/AcrD/AcrF family CKF48_02985 PF00440 Bacterial regulatory proteins, tetR family CKF48_02995 PF03447 Homoserine dehydrogenase, NAD binding domain CKF48_02995 PF00742 Homoserine dehydrogenase CKF48_03000 PF13193 AMP-binding enzyme C-terminal domain CKF48_03000 PF00501 AMP-binding enzyme CKF48_03005 PF00005 ABC transporter CKF48_03010 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_03015 PF09084 NMT1/THI5 like CKF48_03020 PF01053 Cys/Met metabolism PLP-dependent enzyme CKF48_03030 PF00753 Metallo-beta-lactamase superfamily CKF48_03035 PF04285 Protein of unknown function (DUF444) CKF48_03040 PF08298 PrkA AAA domain CKF48_03040 PF06798 PrkA serine protein kinase C-terminal domain CKF48_03045 PF00881 Nitroreductase family CKF48_03050 PF00588 SpoU rRNA Methylase family CKF48_03055 PF12671 Putative amidase domain CKF48_03060 PF08331 Domain of unknown function (DUF1730) CKF48_03070 PF01032 FecCD transport family CKF48_03075 PF01032 FecCD transport family CKF48_03080 PF01497 Periplasmic binding protein CKF48_03085 PF00005 ABC transporter CKF48_03190 PF14540 Nucleotidyltransferase-like CKF48_03190 PF18576 Helix-turn-helix domain CKF48_03195 PF11023 Zinc-ribbon containing domain CKF48_03200 PF01475 Ferric uptake regulator family CKF48_03205 PF00578 AhpC/TSA family CKF48_03210 PF07885 Ion channel CKF48_03215 PF00202 Aminotransferase class-III CKF48_03220 PF01493 GXGXG motif CKF48_03220 PF00310 Glutamine amidotransferases class-II CKF48_03220 PF04898 Glutamate synthase central domain CKF48_03220 PF01645 Conserved region in glutamate synthase CKF48_03225 PF06081 Aromatic acid exporter family member 1 CKF48_03240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKF48_03245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_03245 PF00005 ABC transporter CKF48_03250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_03250 PF00005 ABC transporter CKF48_03255 PF00664 ABC transporter transmembrane region CKF48_03255 PF00005 ABC transporter CKF48_03260 PF04167 Protein of unknown function (DUF402) CKF48_03265 PF14182 YgaB-like protein CKF48_03285 PF04307 LexA-binding, inner membrane-associated putative hydrolase CKF48_03290 PF14043 WVELL protein CKF48_03295 PF08176 Small acid-soluble spore protein K family CKF48_03305 PF08838 Protein of unknown function (DUF1811) CKF48_03310 PF02631 RecX family CKF48_03315 PF08338 Domain of unknown function (DUF1731) CKF48_03315 PF01370 NAD dependent epimerase/dehydratase family CKF48_03330 PF00664 ABC transporter transmembrane region CKF48_03330 PF00005 ABC transporter CKF48_03335 PF00664 ABC transporter transmembrane region CKF48_03335 PF00005 ABC transporter CKF48_03345 PF00893 Small Multidrug Resistance protein CKF48_03350 PF00893 Small Multidrug Resistance protein CKF48_03355 PF00440 Bacterial regulatory proteins, tetR family CKF48_03360 PF00005 ABC transporter CKF48_03365 PF00005 ABC transporter CKF48_03365 PF12399 Branched-chain amino acid ATP-binding cassette transporter CKF48_03370 PF02653 Branched-chain amino acid transport system / permease component CKF48_03370 PF11862 Domain of unknown function (DUF3382) CKF48_03375 PF02653 Branched-chain amino acid transport system / permease component CKF48_03385 PF00474 Sodium:solute symporter family CKF48_03390 PF17853 GGDEF-like domain CKF48_03390 PF13556 PucR C-terminal helix-turn-helix domain CKF48_03395 PF01546 Peptidase family M20/M25/M40 CKF48_03395 PF07687 Peptidase dimerisation domain CKF48_03400 PF07687 Peptidase dimerisation domain CKF48_03400 PF01546 Peptidase family M20/M25/M40 CKF48_03410 PF10720 Protein of unknown function (DUF2515) CKF48_03415 PF13249 Squalene-hopene cyclase N-terminal domain CKF48_03415 PF13243 Squalene-hopene cyclase C-terminal domain CKF48_03420 PF01546 Peptidase family M20/M25/M40 CKF48_03435 PF00551 Formyl transferase CKF48_03435 PF01842 ACT domain CKF48_03460 PF12833 Helix-turn-helix domain CKF48_03460 PF06445 GyrI-like small molecule binding domain CKF48_03465 PF02028 BCCT, betaine/carnitine/choline family transporter CKF48_03475 PF00005 ABC transporter CKF48_03480 PF02687 FtsX-like permease family CKF48_03480 PF12704 MacB-like periplasmic core domain CKF48_03505 PF03301 Tryptophan 2,3-dioxygenase CKF48_03510 PF04199 Putative cyclase CKF48_03515 PF00266 Aminotransferase class-V CKF48_03530 PF01758 Sodium Bile acid symporter family CKF48_03535 PF02913 FAD linked oxidases, C-terminal domain CKF48_03535 PF01565 FAD binding domain CKF48_03540 PF00392 Bacterial regulatory proteins, gntR family CKF48_03540 PF07729 FCD domain CKF48_03545 PF00255 Glutathione peroxidase CKF48_03550 PF01619 Proline dehydrogenase CKF48_03555 PF02589 LUD domain CKF48_03560 PF11870 Domain of unknown function (DUF3390) CKF48_03560 PF02589 LUD domain CKF48_03560 PF13183 4Fe-4S dicluster domain CKF48_03565 PF02754 Cysteine-rich domain CKF48_03585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKF48_03590 PF00005 ABC transporter CKF48_03595 PF12399 Branched-chain amino acid ATP-binding cassette transporter CKF48_03595 PF00005 ABC transporter CKF48_03605 PF02653 Branched-chain amino acid transport system / permease component CKF48_03620 PF00534 Glycosyl transferases group 1 CKF48_03620 PF13439 Glycosyltransferase Family 4 CKF48_03625 PF00534 Glycosyl transferases group 1 CKF48_03625 PF13439 Glycosyltransferase Family 4 CKF48_03630 PF01370 NAD dependent epimerase/dehydratase family CKF48_03635 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CKF48_03635 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CKF48_03635 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CKF48_03640 PF00483 Nucleotidyl transferase CKF48_03645 PF08757 CotH kinase protein CKF48_03655 PF01938 TRAM domain CKF48_03655 PF05958 tRNA (Uracil-5-)-methyltransferase CKF48_03660 PF00730 HhH-GPD superfamily base excision DNA repair protein CKF48_03665 PF01522 Polysaccharide deacetylase CKF48_03670 PF05681 Fumarate hydratase (Fumerase) CKF48_03670 PF05683 Fumarase C-terminus CKF48_03680 PF08756 YfkB-like domain CKF48_03680 PF04055 Radical SAM superfamily CKF48_03685 PF14167 YfkD-like protein CKF48_03690 PF01699 Sodium/calcium exchanger protein CKF48_03695 PF07690 Major Facilitator Superfamily CKF48_03705 PF03631 Virulence factor BrkB CKF48_03715 PF06569 Protein of unknown function (DUF1128) CKF48_03720 PF00557 Metallopeptidase family M24 CKF48_03725 PF01965 DJ-1/PfpI family CKF48_03730 PF01381 Helix-turn-helix CKF48_03730 PF08671 Anti-repressor SinI CKF48_03740 PF04227 Indigoidine synthase A like protein CKF48_03750 PF13677 Membrane MotB of proton-channel complex MotA/MotB CKF48_03750 PF00691 OmpA family CKF48_03755 PF01618 MotA/TolQ/ExbB proton channel family CKF48_03760 PF09350 Domain of unknown function (DUF1992) CKF48_03765 PF00221 Aromatic amino acid lyase CKF48_03770 PF01131 DNA topoisomerase CKF48_03770 PF01751 Toprim domain CKF48_03775 PF02073 Thermophilic metalloprotease (M29) CKF48_03790 PF01741 Large-conductance mechanosensitive channel, MscL CKF48_03795 PF01027 Inhibitor of apoptosis-promoting Bax1 CKF48_03805 PF00732 GMC oxidoreductase CKF48_03805 PF05199 GMC oxidoreductase CKF48_03810 PF02416 mttA/Hcf106 family CKF48_03815 PF00902 Sec-independent protein translocase protein (TatC) CKF48_03825 PF13091 PLD-like domain CKF48_03825 PF13396 Phospholipase_D-nuclease N-terminal CKF48_03840 PF03061 Thioesterase superfamily CKF48_03845 PF01544 CorA-like Mg2+ transporter protein CKF48_03855 PF08281 Sigma-70, region 4 CKF48_03855 PF04542 Sigma-70 region 2 CKF48_03860 PF01943 Polysaccharide biosynthesis protein CKF48_03865 PF12848 ABC transporter CKF48_03865 PF16326 ABC transporter C-terminal domain CKF48_03865 PF00005 ABC transporter CKF48_03870 PF00072 Response regulator receiver domain CKF48_03870 PF00196 Bacterial regulatory proteins, luxR family CKF48_03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_03875 PF07730 Histidine kinase CKF48_03900 PF03737 Aldolase/RraA CKF48_03905 PF01053 Cys/Met metabolism PLP-dependent enzyme CKF48_03910 PF00355 Rieske [2Fe-2S] domain CKF48_03910 PF01266 FAD dependent oxidoreductase CKF48_03915 PF00271 Helicase conserved C-terminal domain CKF48_03915 PF00270 DEAD/DEAH box helicase CKF48_03920 PF07690 Major Facilitator Superfamily CKF48_03925 PF00082 Subtilase family CKF48_03930 PF00107 Zinc-binding dehydrogenase CKF48_03930 PF08240 Alcohol dehydrogenase GroES-like domain CKF48_03935 PF00557 Metallopeptidase family M24 CKF48_03940 PF00313 'Cold-shock' DNA-binding domain CKF48_03945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_03945 PF07694 5TMR of 5TMR-LYT CKF48_03945 PF13492 GAF domain CKF48_03945 PF06580 Histidine kinase CKF48_03950 PF00072 Response regulator receiver domain CKF48_03950 PF04397 LytTr DNA-binding domain CKF48_03955 PF02554 Carbon starvation protein CstA CKF48_03960 PF07733 Bacterial DNA polymerase III alpha NTPase domain CKF48_03960 PF11490 DNA polymerase III polC-type N-terminus II CKF48_03960 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CKF48_03960 PF14579 Helix-hairpin-helix motif CKF48_03960 PF02811 PHP domain CKF48_03960 PF00929 Exonuclease CKF48_03980 PF01266 FAD dependent oxidoreductase CKF48_03990 PF01565 FAD binding domain CKF48_03990 PF02913 FAD linked oxidases, C-terminal domain CKF48_03995 PF07729 FCD domain CKF48_03995 PF00392 Bacterial regulatory proteins, gntR family CKF48_04015 PF00375 Sodium:dicarboxylate symporter family CKF48_04025 PF00067 Cytochrome P450 CKF48_04030 PF00072 Response regulator receiver domain CKF48_04030 PF08279 HTH domain CKF48_04035 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CKF48_04035 PF17203 Single cache domain 3 CKF48_04035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_04040 PF03480 Bacterial extracellular solute-binding protein, family 7 CKF48_04050 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CKF48_04050 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CKF48_04055 PF04397 LytTr DNA-binding domain CKF48_04055 PF00072 Response regulator receiver domain CKF48_04060 PF00860 Permease family CKF48_04065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_04065 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CKF48_04065 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_04070 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_04075 PF09383 NIL domain CKF48_04075 PF00005 ABC transporter CKF48_04100 PF13180 PDZ domain CKF48_04120 PF04072 Leucine carboxyl methyltransferase CKF48_04125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_04125 PF00672 HAMP domain CKF48_04125 PF00512 His Kinase A (phospho-acceptor) domain CKF48_04130 PF00486 Transcriptional regulatory protein, C terminal CKF48_04130 PF00072 Response regulator receiver domain CKF48_04135 PF00248 Aldo/keto reductase family CKF48_04160 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CKF48_04160 PF18277 AbrB C-terminal domain CKF48_04165 PF13344 Haloacid dehalogenase-like hydrolase CKF48_04165 PF00293 NUDIX domain CKF48_04170 PF05504 Spore germination B3/ GerAC like, C-terminal CKF48_04175 PF03323 Bacillus/Clostridium GerA spore germination protein CKF48_04180 PF03845 Spore germination protein CKF48_04185 PF00756 Putative esterase CKF48_04190 PF01032 FecCD transport family CKF48_04195 PF01032 FecCD transport family CKF48_04210 PF01709 Transcriptional regulator CKF48_04220 PF01047 MarR family CKF48_04235 PF00285 Citrate synthase, C-terminal domain CKF48_04240 PF03466 LysR substrate binding domain CKF48_04240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKF48_04245 PF00171 Aldehyde dehydrogenase family CKF48_04250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKF48_04255 PF00152 tRNA synthetases class II (D, K and N) CKF48_04255 PF01336 OB-fold nucleic acid binding domain CKF48_04265 PF13378 Enolase C-terminal domain-like CKF48_04265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CKF48_04275 PF01546 Peptidase family M20/M25/M40 CKF48_04275 PF07687 Peptidase dimerisation domain CKF48_04280 PF00202 Aminotransferase class-III CKF48_04285 PF00171 Aldehyde dehydrogenase family CKF48_04290 PF00158 Sigma-54 interaction domain CKF48_04290 PF13426 PAS domain CKF48_04290 PF02954 Bacterial regulatory protein, Fis family CKF48_04295 PF00664 ABC transporter transmembrane region CKF48_04295 PF00005 ABC transporter CKF48_04300 PF00664 ABC transporter transmembrane region CKF48_04300 PF00005 ABC transporter CKF48_04305 PF01545 Cation efflux family CKF48_04305 PF16916 Dimerisation domain of Zinc Transporter CKF48_04320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_04320 PF16736 Single Cache-like CKF48_04320 PF00512 His Kinase A (phospho-acceptor) domain CKF48_04320 PF00989 PAS fold CKF48_04325 PF00486 Transcriptional regulatory protein, C terminal CKF48_04325 PF00072 Response regulator receiver domain CKF48_04330 PF07563 Protein of unknown function (DUF1541) CKF48_04335 PF00583 Acetyltransferase (GNAT) family CKF48_04345 PF08281 Sigma-70, region 4 CKF48_04345 PF04542 Sigma-70 region 2 CKF48_04350 PF13739 Deacetylase PdaC CKF48_04350 PF11738 Protein of unknown function (DUF3298) CKF48_04355 PF01757 Acyltransferase family CKF48_04375 PF02653 Branched-chain amino acid transport system / permease component CKF48_04380 PF00005 ABC transporter CKF48_04390 PF01008 Initiation factor 2 subunit family CKF48_04395 PF01636 Phosphotransferase enzyme family CKF48_04400 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain CKF48_04400 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain CKF48_04410 PF00596 Class II Aldolase and Adducin N-terminal domain CKF48_04415 PF03079 ARD/ARD' family CKF48_04425 PF00107 Zinc-binding dehydrogenase CKF48_04425 PF08240 Alcohol dehydrogenase GroES-like domain CKF48_04440 PF01804 Penicillin amidase CKF48_04445 PF13302 Acetyltransferase (GNAT) domain CKF48_04460 PF12867 DinB superfamily CKF48_04465 PF13419 Haloacid dehalogenase-like hydrolase CKF48_04480 PF04134 Protein of unknown function, DUF393 CKF48_04505 PF00268 Ribonucleotide reductase, small chain CKF48_04520 PF09335 SNARE associated Golgi protein CKF48_04525 PF03806 AbgT putative transporter family CKF48_04530 PF01546 Peptidase family M20/M25/M40 CKF48_04530 PF07687 Peptidase dimerisation domain CKF48_04545 PF07690 Major Facilitator Superfamily CKF48_04555 PF06508 Queuosine biosynthesis protein QueC CKF48_04565 PF04055 Radical SAM superfamily CKF48_04570 PF13556 PucR C-terminal helix-turn-helix domain CKF48_04570 PF17853 GGDEF-like domain CKF48_04570 PF05651 Putative sugar diacid recognition CKF48_04595 PF14306 PUA-like domain CKF48_04595 PF01747 ATP-sulfurylase CKF48_04600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKF48_04600 PF03466 LysR substrate binding domain CKF48_04605 PF00107 Zinc-binding dehydrogenase CKF48_04605 PF08240 Alcohol dehydrogenase GroES-like domain CKF48_04610 PF01925 Sulfite exporter TauE/SafE CKF48_04635 PF00291 Pyridoxal-phosphate dependent enzyme CKF48_04640 PF02423 Ornithine cyclodeaminase/mu-crystallin family CKF48_04645 PF00583 Acetyltransferase (GNAT) family CKF48_04645 PF14698 Argininosuccinate lyase C-terminal CKF48_04645 PF00206 Lyase CKF48_04670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKF48_04670 PF03466 LysR substrate binding domain CKF48_04675 PF01596 O-methyltransferase CKF48_04680 PF00485 Phosphoribulokinase / Uridine kinase family CKF48_04690 PF00005 ABC transporter CKF48_04710 PF03641 Possible lysine decarboxylase CKF48_04715 PF02566 OsmC-like protein CKF48_04720 PF07690 Major Facilitator Superfamily CKF48_04730 PF00916 Sulfate permease family CKF48_04730 PF01740 STAS domain CKF48_04735 PF02796 Helix-turn-helix domain of resolvase CKF48_04735 PF00239 Resolvase, N terminal domain CKF48_04745 PF00296 Luciferase-like monooxygenase CKF48_04750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CKF48_04755 PF01047 MarR family CKF48_04760 PF00781 Diacylglycerol kinase catalytic domain CKF48_04765 PF00857 Isochorismatase family CKF48_04770 PF07690 Major Facilitator Superfamily CKF48_04775 PF13419 Haloacid dehalogenase-like hydrolase CKF48_04785 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKF48_04790 PF00149 Calcineurin-like phosphoesterase CKF48_04790 PF02872 5'-nucleotidase, C-terminal domain CKF48_04795 PF00512 His Kinase A (phospho-acceptor) domain CKF48_04795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_04795 PF00989 PAS fold CKF48_04795 PF08447 PAS fold CKF48_04810 PF08241 Methyltransferase domain CKF48_04815 PF13649 Methyltransferase domain CKF48_04820 PF02567 Phenazine biosynthesis-like protein CKF48_04835 PF01040 UbiA prenyltransferase family CKF48_04850 PF01266 FAD dependent oxidoreductase CKF48_04860 PF00698 Acyl transferase domain CKF48_04860 PF08240 Alcohol dehydrogenase GroES-like domain CKF48_04860 PF00107 Zinc-binding dehydrogenase CKF48_04860 PF16197 Ketoacyl-synthetase C-terminal extension CKF48_04860 PF14765 Polyketide synthase dehydratase CKF48_04860 PF00109 Beta-ketoacyl synthase, N-terminal domain CKF48_04860 PF02801 Beta-ketoacyl synthase, C-terminal domain CKF48_04860 PF00550 Phosphopantetheine attachment site CKF48_04860 PF08659 KR domain CKF48_04880 PF03972 MmgE/PrpD family CKF48_04885 PF00285 Citrate synthase, C-terminal domain CKF48_04900 PF07690 Major Facilitator Superfamily CKF48_04910 PF01636 Phosphotransferase enzyme family CKF48_04915 PF03180 NLPA lipoprotein CKF48_04920 PF00155 Aminotransferase class I and II CKF48_04925 PF01740 STAS domain CKF48_04925 PF13426 PAS domain CKF48_04945 PF00583 Acetyltransferase (GNAT) family CKF48_04950 PF00440 Bacterial regulatory proteins, tetR family CKF48_04950 PF16925 Tetracyclin repressor-like, C-terminal domain CKF48_04960 PF13411 MerR HTH family regulatory protein CKF48_04965 PF01595 Cyclin M transmembrane N-terminal domain CKF48_04965 PF03471 Transporter associated domain CKF48_04965 PF00571 CBS domain CKF48_04975 PF00108 Thiolase, N-terminal domain CKF48_04975 PF02803 Thiolase, C-terminal domain CKF48_04980 PF01144 Coenzyme A transferase CKF48_04985 PF01144 Coenzyme A transferase CKF48_04995 PF00561 alpha/beta hydrolase fold CKF48_05010 PF00583 Acetyltransferase (GNAT) family CKF48_05020 PF06177 QueT transporter CKF48_05025 PF03741 Integral membrane protein TerC family CKF48_05030 PF01546 Peptidase family M20/M25/M40 CKF48_05035 PF00696 Amino acid kinase family CKF48_05035 PF13840 ACT domain CKF48_05045 PF06207 Protein of unknown function (DUF1002) CKF48_05050 PF01551 Peptidase family M23 CKF48_05065 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CKF48_05065 PF00749 tRNA synthetases class I (E and Q), catalytic domain CKF48_05075 PF13411 MerR HTH family regulatory protein CKF48_05090 PF03009 Glycerophosphoryl diester phosphodiesterase family CKF48_05095 PF00753 Metallo-beta-lactamase superfamily CKF48_05100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CKF48_05100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CKF48_05110 PF02225 PA domain CKF48_05110 PF04389 Peptidase family M28 CKF48_05115 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKF48_05125 PF12728 Helix-turn-helix domain CKF48_05130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_05130 PF13426 PAS domain CKF48_05130 PF13188 PAS domain CKF48_05130 PF00989 PAS fold CKF48_05130 PF00512 His Kinase A (phospho-acceptor) domain CKF48_05135 PF05816 Toxic anion resistance protein (TelA) CKF48_05140 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein CKF48_05145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_05145 PF00512 His Kinase A (phospho-acceptor) domain CKF48_05145 PF00989 PAS fold CKF48_05145 PF13188 PAS domain CKF48_05145 PF13426 PAS domain CKF48_05150 PF08546 Ketopantoate reductase PanE/ApbA C terminal CKF48_05150 PF02558 Ketopantoate reductase PanE/ApbA CKF48_05155 PF04203 Sortase domain CKF48_05165 PF01740 STAS domain CKF48_05170 PF00375 Sodium:dicarboxylate symporter family CKF48_05180 PF03009 Glycerophosphoryl diester phosphodiesterase family CKF48_05185 PF13416 Bacterial extracellular solute-binding protein CKF48_05190 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_05195 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_05200 PF00005 ABC transporter CKF48_05200 PF17912 MalK OB fold domain CKF48_05200 PF03459 TOBE domain CKF48_05220 PF00356 Bacterial regulatory proteins, lacI family CKF48_05225 PF10502 Signal peptidase, peptidase S26 CKF48_05235 PF12833 Helix-turn-helix domain CKF48_05245 PF00155 Aminotransferase class I and II CKF48_05250 PF00005 ABC transporter CKF48_05255 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_05265 PF00465 Iron-containing alcohol dehydrogenase CKF48_05270 PF00294 pfkB family carbohydrate kinase CKF48_05275 PF01925 Sulfite exporter TauE/SafE CKF48_05280 PF00753 Metallo-beta-lactamase superfamily CKF48_05280 PF00581 Rhodanese-like domain CKF48_05285 PF01206 Sulfurtransferase TusA CKF48_05285 PF00581 Rhodanese-like domain CKF48_05290 PF00581 Rhodanese-like domain CKF48_05295 PF00581 Rhodanese-like domain CKF48_05300 PF13686 DsrE/DsrF/DrsH-like family CKF48_05305 PF01206 Sulfurtransferase TusA CKF48_05310 PF02583 Metal-sensitive transcriptional repressor CKF48_05325 PF06445 GyrI-like small molecule binding domain CKF48_05325 PF12833 Helix-turn-helix domain CKF48_05330 PF03352 Methyladenine glycosylase CKF48_05350 PF01740 STAS domain CKF48_05350 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain CKF48_05395 PF00005 ABC transporter CKF48_05400 PF00392 Bacterial regulatory proteins, gntR family CKF48_05410 PF01557 Fumarylacetoacetate (FAA) hydrolase family CKF48_05415 PF05683 Fumarase C-terminus CKF48_05420 PF05681 Fumarate hydratase (Fumerase) CKF48_05425 PF00939 Sodium:sulfate symporter transmembrane region CKF48_05430 PF09335 SNARE associated Golgi protein CKF48_05435 PF00583 Acetyltransferase (GNAT) family CKF48_05450 PF00245 Alkaline phosphatase CKF48_05470 PF01381 Helix-turn-helix CKF48_05475 PF03129 Anticodon binding domain CKF48_05475 PF13393 Histidyl-tRNA synthetase CKF48_05490 PF00293 NUDIX domain CKF48_05510 PF07853 Protein of unknown function (DUF1648) CKF48_05510 PF13630 SdpI/YhfL protein family CKF48_05515 PF00939 Sodium:sulfate symporter transmembrane region CKF48_05525 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CKF48_05525 PF13378 Enolase C-terminal domain-like CKF48_05550 PF01425 Amidase CKF48_05555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_05555 PF00005 ABC transporter CKF48_05560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_05560 PF00005 ABC transporter CKF48_05565 PF12911 N-terminal TM domain of oligopeptide transport permease C CKF48_05565 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_05575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKF48_05595 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CKF48_05595 PF13378 Enolase C-terminal domain-like CKF48_05600 PF07690 Major Facilitator Superfamily CKF48_05605 PF00171 Aldehyde dehydrogenase family CKF48_05610 PF00701 Dihydrodipicolinate synthetase family CKF48_05615 PF00392 Bacterial regulatory proteins, gntR family CKF48_05615 PF07729 FCD domain CKF48_05620 PF08666 SAF domain CKF48_05620 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CKF48_05625 PF00107 Zinc-binding dehydrogenase CKF48_05625 PF08240 Alcohol dehydrogenase GroES-like domain CKF48_05635 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CKF48_05635 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CKF48_05640 PF00230 Major intrinsic protein CKF48_05645 PF04309 Glycerol-3-phosphate responsive antiterminator CKF48_05660 PF00144 Beta-lactamase CKF48_05670 PF02627 Carboxymuconolactone decarboxylase family CKF48_05675 PF10787 Uncharacterised protein from bacillus cereus group CKF48_05685 PF00392 Bacterial regulatory proteins, gntR family CKF48_05685 PF00155 Aminotransferase class I and II CKF48_05695 PF12706 Beta-lactamase superfamily domain CKF48_05705 PF01970 Tripartite tricarboxylate transporter TctA family CKF48_05715 PF03401 Tripartite tricarboxylate transporter family receptor CKF48_05720 PF00072 Response regulator receiver domain CKF48_05720 PF08279 HTH domain CKF48_05720 PF12431 Transcriptional regulator CKF48_05725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_05725 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CKF48_05730 PF00107 Zinc-binding dehydrogenase CKF48_05730 PF08240 Alcohol dehydrogenase GroES-like domain CKF48_05750 PF03466 LysR substrate binding domain CKF48_05750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKF48_05755 PF07969 Amidohydrolase family CKF48_05760 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CKF48_05765 PF00375 Sodium:dicarboxylate symporter family CKF48_05770 PF03060 Nitronate monooxygenase CKF48_05775 PF00132 Bacterial transferase hexapeptide (six repeats) CKF48_05785 PF00378 Enoyl-CoA hydratase/isomerase CKF48_05790 PF02803 Thiolase, C-terminal domain CKF48_05790 PF00108 Thiolase, N-terminal domain CKF48_05795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CKF48_05795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CKF48_05800 PF00171 Aldehyde dehydrogenase family CKF48_05805 PF00378 Enoyl-CoA hydratase/isomerase CKF48_05810 PF00378 Enoyl-CoA hydratase/isomerase CKF48_05835 PF05138 Phenylacetic acid catabolic protein CKF48_05840 PF14535 AMP-binding enzyme C-terminal domain CKF48_05840 PF00501 AMP-binding enzyme CKF48_05855 PF01497 Periplasmic binding protein CKF48_05865 PF00005 ABC transporter CKF48_05875 PF00486 Transcriptional regulatory protein, C terminal CKF48_05875 PF00072 Response regulator receiver domain CKF48_05880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_05880 PF00512 His Kinase A (phospho-acceptor) domain CKF48_05885 PF03741 Integral membrane protein TerC family CKF48_05895 PF00457 Glycosyl hydrolases family 11 CKF48_05895 PF01522 Polysaccharide deacetylase CKF48_05895 PF03422 Carbohydrate binding module (family 6) CKF48_05905 PF01636 Phosphotransferase enzyme family CKF48_05910 PF00005 ABC transporter CKF48_05920 PF01872 RibD C-terminal domain CKF48_05980 PF02743 Cache domain CKF48_05980 PF00672 HAMP domain CKF48_05980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKF48_05985 PF13457 GW (Gly-Tryp) dipeptide domain CKF48_05985 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CKF48_05995 PF05504 Spore germination B3/ GerAC like, C-terminal CKF48_06000 PF03323 Bacillus/Clostridium GerA spore germination protein CKF48_06005 PF03845 Spore germination protein CKF48_06035 PF00005 ABC transporter CKF48_06050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_06050 PF00005 ABC transporter CKF48_06055 PF00005 ABC transporter CKF48_06055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_06060 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_06075 PF01494 FAD binding domain CKF48_06085 PF00440 Bacterial regulatory proteins, tetR family CKF48_06090 PF13673 Acetyltransferase (GNAT) domain CKF48_06090 PF18014 Acetyltransferase (GNAT) domain CKF48_06100 PF13302 Acetyltransferase (GNAT) domain CKF48_06120 PF01381 Helix-turn-helix CKF48_06125 PF13443 Cro/C1-type HTH DNA-binding domain CKF48_06130 PF11188 Protein of unknown function (DUF2975) CKF48_06150 PF00005 ABC transporter CKF48_06150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_06155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_06155 PF00005 ABC transporter CKF48_06160 PF12911 N-terminal TM domain of oligopeptide transport permease C CKF48_06160 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_06165 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_06170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKF48_06180 PF08240 Alcohol dehydrogenase GroES-like domain CKF48_06180 PF00107 Zinc-binding dehydrogenase CKF48_06195 PF00144 Beta-lactamase CKF48_06205 PF01799 [2Fe-2S] binding domain CKF48_06205 PF00111 2Fe-2S iron-sulfur cluster binding domain CKF48_06210 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CKF48_06210 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CKF48_06215 PF00941 FAD binding domain in molybdopterin dehydrogenase CKF48_06220 PF13478 XdhC Rossmann domain CKF48_06220 PF02625 XdhC and CoxI family CKF48_06225 PF01979 Amidohydrolase family CKF48_06230 PF00266 Aminotransferase class-V CKF48_06235 PF01546 Peptidase family M20/M25/M40 CKF48_06240 PF17853 GGDEF-like domain CKF48_06240 PF13556 PucR C-terminal helix-turn-helix domain CKF48_06240 PF07905 Purine catabolism regulatory protein-like family CKF48_06245 PF00860 Permease family CKF48_06250 PF09349 OHCU decarboxylase CKF48_06250 PF01014 Uricase CKF48_06255 PF13454 FAD-NAD(P)-binding CKF48_06260 PF00576 HIUase/Transthyretin family CKF48_06285 PF04231 Endonuclease I CKF48_06290 PF07690 Major Facilitator Superfamily CKF48_06305 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_06310 PF00005 ABC transporter CKF48_06325 PF01425 Amidase CKF48_06330 PF07729 FCD domain CKF48_06330 PF00392 Bacterial regulatory proteins, gntR family CKF48_06340 PF01713 Smr domain CKF48_06340 PF00488 MutS domain V CKF48_06345 PF01207 Dihydrouridine synthase (Dus) CKF48_06375 PF07308 Protein of unknown function (DUF1456) CKF48_06395 PF13419 Haloacid dehalogenase-like hydrolase CKF48_06415 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKF48_06415 PF13192 Thioredoxin domain CKF48_06420 PF00578 AhpC/TSA family CKF48_06430 PF01022 Bacterial regulatory protein, arsR family CKF48_06480 PF02463 RecF/RecN/SMC N terminal domain CKF48_06495 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CKF48_06495 PF12008 Type I restriction and modification enzyme - subunit R C terminal CKF48_06495 PF18766 SWI2/SNF2 ATPase CKF48_06505 PF02384 N-6 DNA Methylase CKF48_06505 PF12161 HsdM N-terminal domain CKF48_06515 PF05958 tRNA (Uracil-5-)-methyltransferase CKF48_06515 PF01938 TRAM domain CKF48_06525 PF00781 Diacylglycerol kinase catalytic domain CKF48_06530 PF00753 Metallo-beta-lactamase superfamily CKF48_06530 PF03772 Competence protein CKF48_06555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKF48_06560 PF07969 Amidohydrolase family CKF48_06565 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CKF48_06575 PF00072 Response regulator receiver domain CKF48_06575 PF04397 LytTr DNA-binding domain CKF48_06580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_06580 PF06580 Histidine kinase CKF48_06580 PF00672 HAMP domain CKF48_06580 PF02743 Cache domain CKF48_06585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_06585 PF00005 ABC transporter CKF48_06590 PF00005 ABC transporter CKF48_06590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_06595 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_06605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKF48_06610 PF07969 Amidohydrolase family CKF48_06615 PF07969 Amidohydrolase family CKF48_06620 PF01098 Cell cycle protein CKF48_06630 PF04542 Sigma-70 region 2 CKF48_06630 PF08281 Sigma-70, region 4 CKF48_06645 PF01209 ubiE/COQ5 methyltransferase family CKF48_06650 PF00583 Acetyltransferase (GNAT) family CKF48_06655 PF03819 MazG nucleotide pyrophosphohydrolase domain CKF48_06660 PF03641 Possible lysine decarboxylase CKF48_06670 PF00881 Nitroreductase family CKF48_06675 PF01638 HxlR-like helix-turn-helix CKF48_06685 PF01037 Lrp/AsnC ligand binding domain CKF48_06690 PF00857 Isochorismatase family CKF48_06720 PF03551 Transcriptional regulator PadR-like family CKF48_06735 PF02687 FtsX-like permease family CKF48_06735 PF12704 MacB-like periplasmic core domain CKF48_06740 PF00005 ABC transporter CKF48_06745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CKF48_06750 PF04893 Yip1 domain CKF48_06760 PF12389 Camelysin metallo-endopeptidase CKF48_06770 PF03413 Peptidase propeptide and YPEB domain CKF48_06770 PF01447 Thermolysin metallopeptidase, catalytic domain CKF48_06770 PF07504 Fungalysin/Thermolysin Propeptide Motif CKF48_06770 PF02868 Thermolysin metallopeptidase, alpha-helical domain CKF48_06780 PF13538 UvrD-like helicase C-terminal domain CKF48_06790 PF07690 Major Facilitator Superfamily CKF48_06870 PF03009 Glycerophosphoryl diester phosphodiesterase family CKF48_06895 PF04542 Sigma-70 region 2 CKF48_06895 PF08281 Sigma-70, region 4 CKF48_06900 PF07486 Cell Wall Hydrolase CKF48_06905 PF02660 Glycerol-3-phosphate acyltransferase CKF48_06915 PF01070 FMN-dependent dehydrogenase CKF48_06930 PF02833 DHHA2 domain CKF48_06930 PF01368 DHH family CKF48_06940 PF08240 Alcohol dehydrogenase GroES-like domain CKF48_06940 PF13823 Alcohol dehydrogenase GroES-associated CKF48_06940 PF00107 Zinc-binding dehydrogenase CKF48_06955 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CKF48_06955 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKF48_06960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKF48_06960 PF03466 LysR substrate binding domain CKF48_06975 PF00067 Cytochrome P450 CKF48_06980 PF04172 LrgB-like family CKF48_06985 PF03788 LrgA family CKF48_07005 PF03060 Nitronate monooxygenase CKF48_07025 PF01266 FAD dependent oxidoreductase CKF48_07035 PF00557 Metallopeptidase family M24 CKF48_07035 PF01321 Creatinase/Prolidase N-terminal domain CKF48_07040 PF01381 Helix-turn-helix CKF48_07045 PF04346 Ethanolamine utilisation protein, EutH CKF48_07055 PF02934 GatB/GatE catalytic domain CKF48_07055 PF02637 GatB domain CKF48_07060 PF01425 Amidase CKF48_07065 PF02686 Glu-tRNAGln amidotransferase C subunit CKF48_07085 PF13302 Acetyltransferase (GNAT) domain CKF48_07100 PF00368 Hydroxymethylglutaryl-coenzyme A reductase CKF48_07105 PF01381 Helix-turn-helix CKF48_07110 PF07997 Protein of unknown function (DUF1694) CKF48_07120 PF00463 Isocitrate lyase family CKF48_07125 PF00171 Aldehyde dehydrogenase family CKF48_07130 PF07690 Major Facilitator Superfamily CKF48_07135 PF00881 Nitroreductase family CKF48_07155 PF08241 Methyltransferase domain CKF48_07160 PF00302 Chloramphenicol acetyltransferase CKF48_07170 PF07537 CamS sex pheromone cAM373 precursor CKF48_07175 PF12826 Helix-hairpin-helix motif CKF48_07175 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CKF48_07175 PF03120 NAD-dependent DNA ligase OB-fold domain CKF48_07175 PF01653 NAD-dependent DNA ligase adenylation domain CKF48_07175 PF00533 BRCA1 C Terminus (BRCT) domain CKF48_07180 PF00580 UvrD/REP helicase N-terminal domain CKF48_07180 PF13361 UvrD-like helicase C-terminal domain CKF48_07185 PF01884 PcrB family CKF48_07200 PF01371 Trp repressor protein CKF48_07205 PF17479 Protein of unknown function (DUF3048) C-terminal domain CKF48_07205 PF11258 Protein of unknown function (DUF3048) N-terminal domain CKF48_07210 PF13382 Adenine deaminase C-terminal domain CKF48_07210 PF01979 Amidohydrolase family CKF48_07220 PF02844 Phosphoribosylglycinamide synthetase, N domain CKF48_07220 PF02843 Phosphoribosylglycinamide synthetase, C domain CKF48_07220 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CKF48_07225 PF01808 AICARFT/IMPCHase bienzyme CKF48_07225 PF02142 MGS-like domain CKF48_07230 PF00551 Formyl transferase CKF48_07235 PF02769 AIR synthase related protein, C-terminal domain CKF48_07235 PF00586 AIR synthase related protein, N-terminal domain CKF48_07240 PF00156 Phosphoribosyl transferase domain CKF48_07245 PF00586 AIR synthase related protein, N-terminal domain CKF48_07245 PF02769 AIR synthase related protein, C-terminal domain CKF48_07245 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CKF48_07255 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CKF48_07260 PF01259 SAICAR synthetase CKF48_07265 PF10397 Adenylosuccinate lyase C-terminus CKF48_07265 PF00206 Lyase CKF48_07270 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CKF48_07270 PF02222 ATP-grasp domain CKF48_07275 PF00731 AIR carboxylase CKF48_07285 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CKF48_07310 PF00860 Permease family CKF48_07320 PF00958 GMP synthase C terminal domain CKF48_07320 PF02540 NAD synthase CKF48_07320 PF00117 Glutamine amidotransferase class-I CKF48_07325 PF13559 Domain of unknown function (DUF4129) CKF48_07325 PF11992 Domain of unknown function (DUF3488) CKF48_07325 PF01841 Transglutaminase-like superfamily CKF48_07330 PF01882 Protein of unknown function DUF58 CKF48_07335 PF17863 AAA lid domain CKF48_07335 PF07726 ATPase family associated with various cellular activities (AAA) CKF48_07340 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CKF48_07345 PF08379 Bacterial transglutaminase-like N-terminal region CKF48_07345 PF01841 Transglutaminase-like superfamily CKF48_07350 PF00092 von Willebrand factor type A domain CKF48_07370 PF00092 von Willebrand factor type A domain CKF48_07415 PF04740 LXG domain of WXG superfamily CKF48_07445 PF12538 DNA transporter CKF48_07445 PF01580 FtsK/SpoIIIE family CKF48_07450 PF10140 WXG100 protein secretion system (Wss), protein YukC CKF48_07455 PF08817 WXG100 protein secretion system (Wss), protein YukD CKF48_07460 PF06013 Proteins of 100 residues with WXG CKF48_07505 PF14489 QueF-like protein CKF48_07510 PF01595 Cyclin M transmembrane N-terminal domain CKF48_07510 PF03471 Transporter associated domain CKF48_07510 PF00571 CBS domain CKF48_07515 PF01595 Cyclin M transmembrane N-terminal domain CKF48_07515 PF03471 Transporter associated domain CKF48_07515 PF00571 CBS domain CKF48_07525 PF01769 Divalent cation transporter CKF48_07525 PF00571 CBS domain CKF48_07525 PF03448 MgtE intracellular N domain CKF48_07530 PF00171 Aldehyde dehydrogenase family CKF48_07540 PF02875 Mur ligase family, glutamate ligase domain CKF48_07540 PF01225 Mur ligase family, catalytic domain CKF48_07540 PF08245 Mur ligase middle domain CKF48_07545 PF13344 Haloacid dehalogenase-like hydrolase CKF48_07545 PF00293 NUDIX domain CKF48_07550 PF07690 Major Facilitator Superfamily CKF48_07560 PF00132 Bacterial transferase hexapeptide (six repeats) CKF48_07560 PF12464 Maltose acetyltransferase CKF48_07565 PF01557 Fumarylacetoacetate (FAA) hydrolase family CKF48_07570 PF12697 Alpha/beta hydrolase family CKF48_07575 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CKF48_07580 PF13556 PucR C-terminal helix-turn-helix domain CKF48_07585 PF00106 short chain dehydrogenase CKF48_07590 PF00355 Rieske [2Fe-2S] domain CKF48_07595 PF00866 Ring hydroxylating beta subunit CKF48_07600 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CKF48_07600 PF00355 Rieske [2Fe-2S] domain CKF48_07605 PF03466 LysR substrate binding domain CKF48_07605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKF48_07620 PF03480 Bacterial extracellular solute-binding protein, family 7 CKF48_07630 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CKF48_07635 PF00106 short chain dehydrogenase CKF48_07725 PF14659 Phage integrase, N-terminal SAM-like domain CKF48_07725 PF00589 Phage integrase family CKF48_07730 PF00118 TCP-1/cpn60 chaperonin family CKF48_07735 PF00166 Chaperonin 10 Kd subunit CKF48_07740 PF02517 CPBP intramembrane metalloprotease CKF48_07750 PF06971 Putative DNA-binding protein N-terminus CKF48_07750 PF02629 CoA binding domain CKF48_07755 PF01967 MoaC family CKF48_07760 PF12848 ABC transporter CKF48_07760 PF16326 ABC transporter C-terminal domain CKF48_07760 PF00005 ABC transporter CKF48_07765 PF00814 Glycoprotease family CKF48_07770 PF00583 Acetyltransferase (GNAT) family CKF48_07775 PF00814 Glycoprotease family CKF48_07780 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CKF48_07865 PF17283 SprT-like zinc ribbon domain CKF48_07865 PF10263 SprT-like family CKF48_07875 PF17674 HHH domain CKF48_07875 PF00575 S1 RNA binding domain CKF48_07875 PF09371 Tex-like protein N-terminal domain CKF48_07875 PF16921 Tex protein YqgF-like domain CKF48_07880 PF07228 Stage II sporulation protein E (SpoIIE) CKF48_07885 PF04545 Sigma-70, region 4 CKF48_07885 PF04539 Sigma-70 region 3 CKF48_07885 PF04542 Sigma-70 region 2 CKF48_07890 PF13581 Histidine kinase-like ATPase domain CKF48_07895 PF01740 STAS domain CKF48_07900 PF07228 Stage II sporulation protein E (SpoIIE) CKF48_07900 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain CKF48_07905 PF13581 Histidine kinase-like ATPase domain CKF48_07910 PF01740 STAS domain CKF48_07915 PF01740 STAS domain CKF48_07915 PF08678 Rsbr N terminal CKF48_07920 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CKF48_07925 PF01402 Ribbon-helix-helix protein, copG family CKF48_07940 PF01648 4'-phosphopantetheinyl transferase superfamily CKF48_07945 PF01694 Rhomboid family CKF48_07950 PF03703 Bacterial PH domain CKF48_07955 PF03703 Bacterial PH domain CKF48_07960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CKF48_07965 PF00271 Helicase conserved C-terminal domain CKF48_07965 PF00270 DEAD/DEAH box helicase CKF48_07970 PF12146 Serine aminopeptidase, S33 CKF48_07975 PF08245 Mur ligase middle domain CKF48_07975 PF02875 Mur ligase family, glutamate ligase domain CKF48_07975 PF01225 Mur ligase family, catalytic domain CKF48_07980 PF01820 D-ala D-ala ligase N-terminus CKF48_07980 PF07478 D-ala D-ala ligase C-terminus CKF48_07985 PF00300 Histidine phosphatase superfamily (branch 1) CKF48_08000 PF01923 Cobalamin adenosyltransferase CKF48_08015 PF02654 Cobalamin-5-phosphate synthase CKF48_08020 PF07685 CobB/CobQ-like glutamine amidotransferase domain CKF48_08025 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CKF48_08030 PF00155 Aminotransferase class I and II CKF48_08035 PF03186 CobD/Cbib protein CKF48_08040 PF00005 ABC transporter CKF48_08045 PF01032 FecCD transport family CKF48_08050 PF01497 Periplasmic binding protein CKF48_08060 PF01769 Divalent cation transporter CKF48_08060 PF00571 CBS domain CKF48_08060 PF03448 MgtE intracellular N domain CKF48_08065 PF01098 Cell cycle protein CKF48_08070 PF00750 tRNA synthetases class I (R) CKF48_08070 PF05746 DALR anticodon binding domain CKF48_08070 PF03485 Arginyl tRNA synthetase N terminal domain CKF48_08075 PF01925 Sulfite exporter TauE/SafE CKF48_08080 PF09335 SNARE associated Golgi protein CKF48_08085 PF00210 Ferritin-like domain CKF48_08100 PF08327 Activator of Hsp90 ATPase homolog 1-like protein CKF48_08105 PF01022 Bacterial regulatory protein, arsR family CKF48_08125 PF01497 Periplasmic binding protein CKF48_08130 PF00005 ABC transporter CKF48_08135 PF01032 FecCD transport family CKF48_08140 PF01032 FecCD transport family CKF48_08150 PF00005 ABC transporter CKF48_08150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_08155 PF00877 NlpC/P60 family CKF48_08160 PF13378 Enolase C-terminal domain-like CKF48_08160 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CKF48_08165 PF02016 LD-carboxypeptidase N-terminal domain CKF48_08165 PF17676 LD-carboxypeptidase C-terminal domain CKF48_08170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKF48_08175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_08175 PF00005 ABC transporter CKF48_08180 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_08180 PF12911 N-terminal TM domain of oligopeptide transport permease C CKF48_08185 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_08190 PF04951 D-aminopeptidase CKF48_08205 PF00291 Pyridoxal-phosphate dependent enzyme CKF48_08215 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) CKF48_08220 PF01872 RibD C-terminal domain CKF48_08220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CKF48_08225 PF00925 GTP cyclohydrolase II CKF48_08225 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CKF48_08230 PF01494 FAD binding domain CKF48_08235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CKF48_08240 PF01638 HxlR-like helix-turn-helix CKF48_08245 PF07849 Protein of unknown function (DUF1641) CKF48_08250 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CKF48_08250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CKF48_08250 PF00384 Molybdopterin oxidoreductase CKF48_08250 PF12838 4Fe-4S dicluster domain CKF48_08250 PF01568 Molydopterin dinucleotide binding domain CKF48_08255 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CKF48_08255 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CKF48_08260 PF01654 Cytochrome bd terminal oxidase subunit I CKF48_08265 PF02322 Cytochrome bd terminal oxidase subunit II CKF48_08275 PF00893 Small Multidrug Resistance protein CKF48_08280 PF00440 Bacterial regulatory proteins, tetR family CKF48_08280 PF17934 Tetracyclin repressor-like, C-terminal domain CKF48_08285 PF00989 PAS fold CKF48_08285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_08285 PF08447 PAS fold CKF48_08285 PF00512 His Kinase A (phospho-acceptor) domain CKF48_08290 PF02801 Beta-ketoacyl synthase, C-terminal domain CKF48_08290 PF00109 Beta-ketoacyl synthase, N-terminal domain CKF48_08295 PF04073 Aminoacyl-tRNA editing domain CKF48_08300 PF10282 Lactonase, 7-bladed beta-propeller CKF48_08320 PF00005 ABC transporter CKF48_08325 PF00005 ABC transporter CKF48_08340 PF01979 Amidohydrolase family CKF48_08340 PF13382 Adenine deaminase C-terminal domain CKF48_08350 PF13419 Haloacid dehalogenase-like hydrolase CKF48_08355 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CKF48_08355 PF05257 CHAP domain CKF48_08380 PF01053 Cys/Met metabolism PLP-dependent enzyme CKF48_08395 PF01614 Bacterial transcriptional regulator CKF48_08395 PF09339 IclR helix-turn-helix domain CKF48_08400 PF01557 Fumarylacetoacetate (FAA) hydrolase family CKF48_08410 PF07883 Cupin domain CKF48_08415 PF01494 FAD binding domain CKF48_08420 PF07690 Major Facilitator Superfamily CKF48_08425 PF12697 Alpha/beta hydrolase family CKF48_08445 PF00535 Glycosyl transferase family 2 CKF48_08450 PF08485 Polysaccharide biosynthesis protein C-terminal CKF48_08450 PF02719 Polysaccharide biosynthesis protein CKF48_08465 PF00535 Glycosyl transferase family 2 CKF48_08470 PF03109 ABC1 family CKF48_08480 PF02600 Disulfide bond formation protein DsbB CKF48_08485 PF13462 Thioredoxin CKF48_08490 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CKF48_08505 PF02517 CPBP intramembrane metalloprotease CKF48_08510 PF06445 GyrI-like small molecule binding domain CKF48_08510 PF13411 MerR HTH family regulatory protein CKF48_08515 PF02386 Cation transport protein CKF48_08520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CKF48_08520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CKF48_08530 PF00296 Luciferase-like monooxygenase CKF48_08540 PF00199 Catalase CKF48_08540 PF06628 Catalase-related immune-responsive CKF48_08540 PF18011 C-terminal domain found in long catalases CKF48_08550 PF00682 HMGL-like CKF48_08550 PF07836 DmpG-like communication domain CKF48_08555 PF01118 Semialdehyde dehydrogenase, NAD binding domain CKF48_08555 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CKF48_08560 PF01614 Bacterial transcriptional regulator CKF48_08560 PF09339 IclR helix-turn-helix domain CKF48_08565 PF07690 Major Facilitator Superfamily CKF48_08570 PF01557 Fumarylacetoacetate (FAA) hydrolase family CKF48_08575 PF00561 alpha/beta hydrolase fold CKF48_08580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CKF48_08585 PF06574 FAD synthetase CKF48_08585 PF01687 Riboflavin kinase CKF48_08590 PF01613 Flavin reductase like domain CKF48_08595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_08595 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CKF48_08615 PF02016 LD-carboxypeptidase N-terminal domain CKF48_08615 PF17676 LD-carboxypeptidase C-terminal domain CKF48_08620 PF10997 Alternate to MurJ CKF48_08630 PF00884 Sulfatase CKF48_08635 PF00266 Aminotransferase class-V CKF48_08640 PF02660 Glycerol-3-phosphate acyltransferase CKF48_08650 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKF48_08665 PF00672 HAMP domain CKF48_08665 PF00512 His Kinase A (phospho-acceptor) domain CKF48_08665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_08670 PF00072 Response regulator receiver domain CKF48_08670 PF00486 Transcriptional regulatory protein, C terminal CKF48_08690 PF00375 Sodium:dicarboxylate symporter family CKF48_08705 PF07690 Major Facilitator Superfamily CKF48_08740 PF04439 Streptomycin adenylyltransferase CKF48_08745 PF09334 tRNA synthetases class I (M) CKF48_08745 PF08264 Anticodon-binding domain of tRNA CKF48_08765 PF02683 Cytochrome C biogenesis protein transmembrane region CKF48_08775 PF08003 Protein of unknown function (DUF1698) CKF48_08795 PF03601 Conserved hypothetical protein 698 CKF48_08800 PF03466 LysR substrate binding domain CKF48_08800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKF48_08805 PF06445 GyrI-like small molecule binding domain CKF48_08805 PF12833 Helix-turn-helix domain CKF48_08810 PF13538 UvrD-like helicase C-terminal domain CKF48_08815 PF13538 UvrD-like helicase C-terminal domain CKF48_08835 PF09515 Thiamine transporter protein (Thia_YuaJ) CKF48_08845 PF08281 Sigma-70, region 4 CKF48_08845 PF04542 Sigma-70 region 2 CKF48_08860 PF01906 Putative heavy-metal-binding CKF48_08870 PF00067 Cytochrome P450 CKF48_08885 PF10415 Fumarase C C-terminus CKF48_08885 PF00206 Lyase CKF48_08905 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_08905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_08905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_08910 PF00501 AMP-binding enzyme CKF48_08910 PF13193 AMP-binding enzyme C-terminal domain CKF48_08915 PF09278 MerR, DNA binding CKF48_08915 PF00376 MerR family regulatory protein CKF48_08970 PF13649 Methyltransferase domain CKF48_09010 PF00535 Glycosyl transferase family 2 CKF48_09015 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CKF48_09015 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CKF48_09015 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CKF48_09025 PF08267 Cobalamin-independent synthase, N-terminal domain CKF48_09025 PF01717 Cobalamin-independent synthase, Catalytic domain CKF48_09050 PF14537 Cytochrome c3 CKF48_09050 PF00890 FAD binding domain CKF48_09060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKF48_09060 PF03466 LysR substrate binding domain CKF48_09115 PF00005 ABC transporter CKF48_09120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_09120 PF00512 His Kinase A (phospho-acceptor) domain CKF48_09125 PF00072 Response regulator receiver domain CKF48_09125 PF00486 Transcriptional regulatory protein, C terminal CKF48_09130 PF00248 Aldo/keto reductase family CKF48_09135 PF07690 Major Facilitator Superfamily CKF48_09140 PF01638 HxlR-like helix-turn-helix CKF48_09145 PF01381 Helix-turn-helix CKF48_09155 PF00155 Aminotransferase class I and II CKF48_09155 PF00392 Bacterial regulatory proteins, gntR family CKF48_09160 PF01810 LysE type translocator CKF48_09165 PF00485 Phosphoribulokinase / Uridine kinase family CKF48_09180 PF08281 Sigma-70, region 4 CKF48_09180 PF04542 Sigma-70 region 2 CKF48_09185 PF01381 Helix-turn-helix CKF48_09200 PF00248 Aldo/keto reductase family CKF48_09205 PF01380 SIS domain CKF48_09210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CKF48_09210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CKF48_09210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CKF48_09210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CKF48_09215 PF07949 YbbR-like protein CKF48_09220 PF02457 DisA bacterial checkpoint controller nucleotide-binding CKF48_09225 PF13490 Putative zinc-finger CKF48_09230 PF04542 Sigma-70 region 2 CKF48_09230 PF08281 Sigma-70, region 4 CKF48_09240 PF00491 Arginase family CKF48_09305 PF01522 Polysaccharide deacetylase CKF48_09310 PF14089 KinB-signalling pathway activation in sporulation CKF48_09315 PF17898 Spore germination GerD central core domain CKF48_09320 PF10609 NUBPL iron-transfer P-loop NTPase CKF48_09325 PF01520 N-acetylmuramoyl-L-alanine amidase CKF48_09335 PF14748 Pyrroline-5-carboxylate reductase dimerisation CKF48_09335 PF03807 NADP oxidoreductase coenzyme F420-dependent CKF48_09345 PF01061 ABC-2 type transporter CKF48_09370 PF05569 BlaR1 peptidase M56 CKF48_09370 PF00905 Penicillin binding protein transpeptidase domain CKF48_09375 PF03965 Penicillinase repressor CKF48_09405 PF12679 ABC-2 family transporter protein CKF48_09410 PF00005 ABC transporter CKF48_09410 PF13732 Domain of unknown function (DUF4162) CKF48_09415 PF13396 Phospholipase_D-nuclease N-terminal CKF48_09430 PF04542 Sigma-70 region 2 CKF48_09430 PF08281 Sigma-70, region 4 CKF48_09435 PF00486 Transcriptional regulatory protein, C terminal CKF48_09435 PF00072 Response regulator receiver domain CKF48_09440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_09440 PF00512 His Kinase A (phospho-acceptor) domain CKF48_09445 PF07690 Major Facilitator Superfamily CKF48_09450 PF00005 ABC transporter CKF48_09490 PF13419 Haloacid dehalogenase-like hydrolase CKF48_09510 PF00589 Phage integrase family CKF48_09510 PF02899 Phage integrase, N-terminal SAM-like domain CKF48_09530 PF04542 Sigma-70 region 2 CKF48_09530 PF08281 Sigma-70, region 4 CKF48_09590 PF00005 ABC transporter CKF48_09620 PF04002 RadC-like JAB domain CKF48_09625 PF00380 Ribosomal protein S9/S16 CKF48_09675 PF01520 N-acetylmuramoyl-L-alanine amidase CKF48_09675 PF05036 Sporulation related domain CKF48_09785 PF10668 Phage terminase small subunit CKF48_09880 PF01695 IstB-like ATP binding protein CKF48_09890 PF03837 RecT family CKF48_09895 PF09588 YqaJ-like viral recombinase domain CKF48_09900 PF09466 Hypothetical protein Yqai CKF48_09910 PF09669 Phage regulatory protein Rha (Phage_pRha) CKF48_09910 PF03374 Phage antirepressor protein KilAC domain CKF48_09930 PF01381 Helix-turn-helix CKF48_09945 PF14659 Phage integrase, N-terminal SAM-like domain CKF48_09945 PF00589 Phage integrase family CKF48_09950 PF00380 Ribosomal protein S9/S16 CKF48_09955 PF00572 Ribosomal protein L13 CKF48_09960 PF01416 tRNA pseudouridine synthase CKF48_09965 PF02361 Cobalt transport protein CKF48_09970 PF00005 ABC transporter CKF48_09975 PF00005 ABC transporter CKF48_09985 PF01196 Ribosomal protein L17 CKF48_09990 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CKF48_09990 PF01000 RNA polymerase Rpb3/RpoA insert domain CKF48_09990 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CKF48_09995 PF00411 Ribosomal protein S11 CKF48_10000 PF00416 Ribosomal protein S13/S18 CKF48_10005 PF00444 Ribosomal protein L36 CKF48_10010 PF01176 Translation initiation factor 1A / IF-1 CKF48_10015 PF00557 Metallopeptidase family M24 CKF48_10020 PF05191 Adenylate kinase, active site lid CKF48_10025 PF00344 SecY translocase CKF48_10030 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CKF48_10035 PF00327 Ribosomal protein L30p/L7e CKF48_10040 PF03719 Ribosomal protein S5, C-terminal domain CKF48_10040 PF00333 Ribosomal protein S5, N-terminal domain CKF48_10045 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CKF48_10050 PF00347 Ribosomal protein L6 CKF48_10055 PF00410 Ribosomal protein S8 CKF48_10060 PF00253 Ribosomal protein S14p/S29e CKF48_10065 PF00673 ribosomal L5P family C-terminus CKF48_10065 PF00281 Ribosomal protein L5 CKF48_10070 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CKF48_10070 PF00467 KOW motif CKF48_10075 PF00238 Ribosomal protein L14p/L23e CKF48_10080 PF00366 Ribosomal protein S17 CKF48_10085 PF00831 Ribosomal L29 protein CKF48_10090 PF00252 Ribosomal protein L16p/L10e CKF48_10095 PF00189 Ribosomal protein S3, C-terminal domain CKF48_10095 PF07650 KH domain CKF48_10100 PF00237 Ribosomal protein L22p/L17e CKF48_10105 PF00203 Ribosomal protein S19 CKF48_10110 PF00181 Ribosomal Proteins L2, RNA binding domain CKF48_10110 PF03947 Ribosomal Proteins L2, C-terminal domain CKF48_10115 PF00276 Ribosomal protein L23 CKF48_10120 PF00573 Ribosomal protein L4/L1 family CKF48_10125 PF00297 Ribosomal protein L3 CKF48_10130 PF00338 Ribosomal protein S10p/S20e CKF48_10135 PF02574 Homocysteine S-methyltransferase CKF48_10135 PF02219 Methylenetetrahydrofolate reductase CKF48_10140 PF02607 B12 binding domain CKF48_10140 PF00809 Pterin binding enzyme CKF48_10140 PF02574 Homocysteine S-methyltransferase CKF48_10140 PF02965 Vitamin B12 dependent methionine synthase, activation domain CKF48_10140 PF02310 B12 binding domain CKF48_10145 PF03144 Elongation factor Tu domain 2 CKF48_10145 PF03143 Elongation factor Tu C-terminal domain CKF48_10145 PF00009 Elongation factor Tu GTP binding domain CKF48_10150 PF00009 Elongation factor Tu GTP binding domain CKF48_10150 PF03144 Elongation factor Tu domain 2 CKF48_10150 PF03764 Elongation factor G, domain IV CKF48_10150 PF14492 Elongation Factor G, domain II CKF48_10150 PF00679 Elongation factor G C-terminus CKF48_10155 PF00177 Ribosomal protein S7p/S5e CKF48_10160 PF00164 Ribosomal protein S12/S23 CKF48_10165 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CKF48_10170 PF04983 RNA polymerase Rpb1, domain 3 CKF48_10170 PF00623 RNA polymerase Rpb1, domain 2 CKF48_10170 PF04998 RNA polymerase Rpb1, domain 5 CKF48_10170 PF05000 RNA polymerase Rpb1, domain 4 CKF48_10170 PF04997 RNA polymerase Rpb1, domain 1 CKF48_10175 PF04561 RNA polymerase Rpb2, domain 2 CKF48_10175 PF04563 RNA polymerase beta subunit CKF48_10175 PF04565 RNA polymerase Rpb2, domain 3 CKF48_10175 PF00562 RNA polymerase Rpb2, domain 6 CKF48_10175 PF04560 RNA polymerase Rpb2, domain 7 CKF48_10175 PF10385 RNA polymerase beta subunit external 1 domain CKF48_10180 PF05175 Methyltransferase small domain CKF48_10185 PF16320 Ribosomal protein L7/L12 dimerisation domain CKF48_10185 PF00542 Ribosomal protein L7/L12 C-terminal domain CKF48_10190 PF00466 Ribosomal protein L10 CKF48_10195 PF00687 Ribosomal protein L1p/L10e family CKF48_10200 PF03946 Ribosomal protein L11, N-terminal domain CKF48_10200 PF00298 Ribosomal protein L11, RNA binding domain CKF48_10205 PF00467 KOW motif CKF48_10205 PF02357 Transcription termination factor nusG CKF48_10210 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CKF48_10215 PF00471 Ribosomal protein L33 CKF48_10220 PF08281 Sigma-70, region 4 CKF48_10220 PF04542 Sigma-70 region 2 CKF48_10225 PF05991 YacP-like NYN domain CKF48_10230 PF00588 SpoU rRNA Methylase family CKF48_10230 PF08032 RNA 2'-O ribose methyltransferase substrate binding CKF48_10235 PF00636 Ribonuclease III domain CKF48_10240 PF01406 tRNA synthetases class I (C) catalytic domain CKF48_10240 PF09190 DALR domain CKF48_10245 PF06426 Serine acetyltransferase, N-terminal CKF48_10245 PF00132 Bacterial transferase hexapeptide (six repeats) CKF48_10250 PF00749 tRNA synthetases class I (E and Q), catalytic domain CKF48_10255 PF02542 YgbB family CKF48_10260 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CKF48_10270 PF02457 DisA bacterial checkpoint controller nucleotide-binding CKF48_10270 PF10635 DisA bacterial checkpoint controller linker region CKF48_10275 PF18073 Rubredoxin metal binding domain CKF48_10280 PF02861 Clp amino terminal domain, pathogenicity island component CKF48_10280 PF10431 C-terminal, D2-small domain, of ClpB protein CKF48_10280 PF17871 AAA lid domain CKF48_10280 PF07724 AAA domain (Cdc48 subfamily) CKF48_10280 PF00004 ATPase family associated with various cellular activities (AAA) CKF48_10285 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CKF48_10290 PF02151 UvrB/uvrC motif CKF48_10295 PF05848 CtsR N-terminal HTH domain CKF48_10295 PF17727 CtsR C-terminal dimerization domain CKF48_10385 PF00152 tRNA synthetases class II (D, K and N) CKF48_10385 PF01336 OB-fold nucleic acid binding domain CKF48_10390 PF01207 Dihydrouridine synthase (Dus) CKF48_10395 PF01381 Helix-turn-helix CKF48_10400 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CKF48_10405 PF02152 Dihydroneopterin aldolase CKF48_10410 PF00809 Pterin binding enzyme CKF48_10415 PF01063 Amino-transferase class IV CKF48_10420 PF00117 Glutamine amidotransferase class-I CKF48_10425 PF00425 chorismate binding enzyme CKF48_10425 PF04715 Anthranilate synthase component I, N terminal region CKF48_10430 PF00291 Pyridoxal-phosphate dependent enzyme CKF48_10435 PF13145 PPIC-type PPIASE domain CKF48_10440 PF01430 Hsp33 protein CKF48_10445 PF03309 Type III pantothenate kinase CKF48_10450 PF00004 ATPase family associated with various cellular activities (AAA) CKF48_10450 PF17862 AAA+ lid domain CKF48_10450 PF01434 Peptidase family M41 CKF48_10450 PF06480 FtsH Extracellular CKF48_10460 PF01171 PP-loop family CKF48_10460 PF09179 TilS substrate binding domain CKF48_10460 PF11734 TilS substrate C-terminal domain CKF48_10465 PF00069 Protein kinase domain CKF48_10470 PF00092 von Willebrand factor type A domain CKF48_10475 PF07228 Stage II sporulation protein E (SpoIIE) CKF48_10490 PF00575 S1 RNA binding domain CKF48_10495 PF04977 Septum formation initiator CKF48_10500 PF09578 Spore cortex protein YabQ (Spore_YabQ) CKF48_10505 PF07873 YabP family CKF48_10510 PF01479 S4 domain CKF48_10515 PF03819 MazG nucleotide pyrophosphohydrolase domain CKF48_10515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CKF48_10520 PF01943 Polysaccharide biosynthesis protein CKF48_10520 PF14667 Polysaccharide biosynthesis C-terminal domain CKF48_10525 PF15714 Stage V sporulation protein T C-terminal, transcription factor CKF48_10525 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CKF48_10540 PF01195 Peptidyl-tRNA hydrolase CKF48_10545 PF14693 Ribosomal protein TL5, C-terminal domain CKF48_10545 PF01386 Ribosomal L25p family CKF48_10550 PF14572 Phosphoribosyl synthetase-associated domain CKF48_10550 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CKF48_10555 PF00483 Nucleotidyl transferase CKF48_10555 PF00132 Bacterial transferase hexapeptide (six repeats) CKF48_10560 PF04026 SpoVG CKF48_10565 PF01042 Endoribonuclease L-PSP CKF48_10570 PF00156 Phosphoribosyl transferase domain CKF48_10570 PF09182 Bacterial purine repressor, N-terminal CKF48_10575 PF08544 GHMP kinases C terminal CKF48_10575 PF00288 GHMP kinases N terminal domain CKF48_10580 PF00269 Small, acid-soluble spore proteins, alpha/beta type CKF48_10585 PF06257 Biofilm formation stimulator VEG CKF48_10590 PF05582 YabG peptidase U57 CKF48_10595 PF00398 Ribosomal RNA adenine dimethylase CKF48_10600 PF13331 Domain of unknown function (DUF4093) CKF48_10600 PF13662 Toprim domain CKF48_10605 PF06725 3D domain CKF48_10605 PF07501 G5 domain CKF48_10605 PF03990 G5-linked-Ubiquitin-like domain CKF48_10610 PF01026 TatD related DNase CKF48_10615 PF08264 Anticodon-binding domain of tRNA CKF48_10615 PF09334 tRNA synthetases class I (M) CKF48_10615 PF01588 Putative tRNA binding domain CKF48_10625 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CKF48_10625 PF18277 AbrB C-terminal domain CKF48_10630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CKF48_10635 PF01541 GIY-YIG catalytic domain CKF48_10640 PF05175 Methyltransferase small domain CKF48_10645 PF06156 Initiation control protein YabA CKF48_10650 PF04468 PSP1 C-terminal conserved region CKF48_10655 PF09115 DNA polymerase III, delta subunit, C terminal CKF48_10660 PF03885 Protein of unknown function (DUF327) CKF48_10665 PF06153 Cyclic-di-AMP receptor CKF48_10670 PF02223 Thymidylate kinase CKF48_10675 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CKF48_10675 PF01276 Orn/Lys/Arg decarboxylase, major domain CKF48_10680 PF10764 Inhibitor of sigma-G Gin CKF48_10700 PF07441 SigmaK-factor processing regulatory protein BofA CKF48_10705 PF10704 Protein of unknown function (DUF2508) CKF48_10710 PF13662 Toprim domain CKF48_10710 PF02132 RecR protein CKF48_10720 PF12169 DNA polymerase III subunits gamma and tau domain III CKF48_10730 PF14437 MafB19-like deaminase CKF48_10735 PF00857 Isochorismatase family CKF48_10740 PF00704 Glycosyl hydrolases family 18 CKF48_10740 PF01476 LysM domain CKF48_10745 PF01712 Deoxynucleoside kinase CKF48_10750 PF01712 Deoxynucleoside kinase CKF48_10760 PF02403 Seryl-tRNA synthetase N-terminal domain CKF48_10760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CKF48_10765 PF07943 Penicillin-binding protein 5, C-terminal domain CKF48_10765 PF00768 D-alanyl-D-alanine carboxypeptidase CKF48_10770 PF00571 CBS domain CKF48_10770 PF00478 IMP dehydrogenase / GMP reductase domain CKF48_10775 PF14175 YaaC-like Protein CKF48_10805 PF00521 DNA gyrase/topoisomerase IV, subunit A CKF48_10805 PF03989 DNA gyrase C-terminal domain, beta-propeller CKF48_10810 PF00204 DNA gyrase B CKF48_10810 PF00986 DNA gyrase B subunit, carboxyl terminus CKF48_10810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_10810 PF01751 Toprim domain CKF48_10815 PF04025 Domain of unknown function (DUF370) CKF48_10820 PF02463 RecF/RecN/SMC N terminal domain CKF48_10830 PF02768 DNA polymerase III beta subunit, C-terminal domain CKF48_10830 PF02767 DNA polymerase III beta subunit, central domain CKF48_10830 PF00712 DNA polymerase III beta subunit, N-terminal domain CKF48_10835 PF08299 Bacterial dnaA protein helix-turn-helix CKF48_10835 PF00308 Bacterial dnaA protein CKF48_10835 PF11638 DnaA N-terminal domain CKF48_10840 PF00468 Ribosomal protein L34 CKF48_10845 PF00825 Ribonuclease P CKF48_10850 PF02096 60Kd inner membrane protein CKF48_10855 PF01424 R3H domain CKF48_10855 PF14804 Jag N-terminus CKF48_10860 PF01926 50S ribosome-binding GTPase CKF48_10860 PF10396 GTP-binding protein TrmE N-terminus CKF48_10860 PF12631 MnmE helical domain CKF48_10865 PF13932 GidA associated domain CKF48_10865 PF01134 Glucose inhibited division protein A CKF48_10870 PF02527 rRNA small subunit methyltransferase G CKF48_10875 PF17762 HTH domain found in ParB protein CKF48_10875 PF02195 ParB-like nuclease domain CKF48_10880 PF13614 AAA domain CKF48_10885 PF17762 HTH domain found in ParB protein CKF48_10885 PF02195 ParB-like nuclease domain CKF48_10895 PF06866 Protein of unknown function (DUF1256) CKF48_10900 PF06107 Bacterial protein of unknown function (DUF951) CKF48_10905 PF06071 Protein of unknown function (DUF933) CKF48_10905 PF01926 50S ribosome-binding GTPase CKF48_10910 PF01250 Ribosomal protein S6 CKF48_10915 PF00436 Single-strand binding protein family CKF48_10920 PF01084 Ribosomal protein S18 CKF48_10940 PF09991 Predicted membrane protein (DUF2232) CKF48_10945 PF01368 DHH family CKF48_10945 PF02272 DHHA1 domain CKF48_10950 PF03948 Ribosomal protein L9, C-terminal domain CKF48_10950 PF01281 Ribosomal protein L9, N-terminal domain CKF48_10955 PF03796 DnaB-like helicase C terminal domain CKF48_10955 PF00772 DnaB-like helicase N terminal domain CKF48_10960 PF00709 Adenylosuccinate synthetase CKF48_10995 PF01464 Transglycosylase SLT domain CKF48_10995 PF10145 Phage-related minor tail protein CKF48_10995 PF01551 Peptidase family M23 CKF48_11000 PF00486 Transcriptional regulatory protein, C terminal CKF48_11000 PF00072 Response regulator receiver domain CKF48_11005 PF00512 His Kinase A (phospho-acceptor) domain CKF48_11005 PF13426 PAS domain CKF48_11005 PF00672 HAMP domain CKF48_11005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_11015 PF09648 YycH protein CKF48_11020 PF00753 Metallo-beta-lactamase superfamily CKF48_11025 PF13180 PDZ domain CKF48_11030 PF14116 YyzF-like protein CKF48_11050 PF08281 Sigma-70, region 4 CKF48_11050 PF04542 Sigma-70 region 2 CKF48_11055 PF02590 Predicted SPOUT methyltransferase CKF48_11065 PF00989 PAS fold CKF48_11065 PF00512 His Kinase A (phospho-acceptor) domain CKF48_11065 PF00672 HAMP domain CKF48_11065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_11070 PF00072 Response regulator receiver domain CKF48_11070 PF00486 Transcriptional regulatory protein, C terminal CKF48_11075 PF12796 Ankyrin repeats (3 copies) CKF48_11085 PF00881 Nitroreductase family CKF48_11090 PF13411 MerR HTH family regulatory protein CKF48_11090 PF06445 GyrI-like small molecule binding domain CKF48_11110 PF00293 NUDIX domain CKF48_11120 PF04740 LXG domain of WXG superfamily CKF48_11120 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH CKF48_11155 PF01479 S4 domain CKF48_11155 PF00849 RNA pseudouridylate synthase CKF48_11165 PF00270 DEAD/DEAH box helicase CKF48_11165 PF03880 DbpA RNA binding domain CKF48_11165 PF00271 Helicase conserved C-terminal domain CKF48_11180 PF00392 Bacterial regulatory proteins, gntR family CKF48_11180 PF00155 Aminotransferase class I and II CKF48_11210 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CKF48_11235 PF00486 Transcriptional regulatory protein, C terminal CKF48_11235 PF00072 Response regulator receiver domain CKF48_11240 PF00005 ABC transporter CKF48_11245 PF02687 FtsX-like permease family CKF48_11255 PF06039 Malate:quinone oxidoreductase (Mqo) CKF48_11265 PF00005 ABC transporter CKF48_11265 PF09383 NIL domain CKF48_11270 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_11275 PF03180 NLPA lipoprotein CKF48_11285 PF02447 GntP family permease CKF48_11290 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CKF48_11290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CKF48_11295 PF00392 Bacterial regulatory proteins, gntR family CKF48_11295 PF07729 FCD domain CKF48_11310 PF01235 Sodium:alanine symporter family CKF48_11315 PF13426 PAS domain CKF48_11315 PF01740 STAS domain CKF48_11320 PF08447 PAS fold CKF48_11320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKF48_11320 PF13426 PAS domain CKF48_11325 PF17853 GGDEF-like domain CKF48_11325 PF13556 PucR C-terminal helix-turn-helix domain CKF48_11325 PF05651 Putative sugar diacid recognition CKF48_11330 PF02595 Glycerate kinase family CKF48_11335 PF02447 GntP family permease CKF48_11340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKF48_11340 PF03466 LysR substrate binding domain CKF48_11350 PF02682 Carboxyltransferase domain, subdomain C and D CKF48_11355 PF02626 Carboxyltransferase domain, subdomain A and B CKF48_11360 PF03746 LamB/YcsF family CKF48_11365 PF01566 Natural resistance-associated macrophage protein CKF48_11370 PF07286 Protein of unknown function (DUF1445) CKF48_11375 PF13021 Domain of unknown function (DUF3885) CKF48_11380 PF02557 D-alanyl-D-alanine carboxypeptidase CKF48_11385 PF00512 His Kinase A (phospho-acceptor) domain CKF48_11385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_11390 PF00486 Transcriptional regulatory protein, C terminal CKF48_11390 PF00072 Response regulator receiver domain CKF48_11400 PF01810 LysE type translocator CKF48_11420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKF48_11420 PF00672 HAMP domain CKF48_11420 PF17202 Single cache domain 3 CKF48_11430 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_11435 PF00005 ABC transporter CKF48_11440 PF00465 Iron-containing alcohol dehydrogenase CKF48_11445 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CKF48_11445 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CKF48_11450 PF00881 Nitroreductase family CKF48_11455 PF03471 Transporter associated domain CKF48_11455 PF00571 CBS domain CKF48_11455 PF01595 Cyclin M transmembrane N-terminal domain CKF48_11460 PF00085 Thioredoxin CKF48_11465 PF02687 FtsX-like permease family CKF48_11470 PF00005 ABC transporter CKF48_11475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_11480 PF00486 Transcriptional regulatory protein, C terminal CKF48_11480 PF00072 Response regulator receiver domain CKF48_11485 PF03992 Antibiotic biosynthesis monooxygenase CKF48_11490 PF07702 UTRA domain CKF48_11490 PF00392 Bacterial regulatory proteins, gntR family CKF48_11510 PF05861 Bacterial phosphonate metabolism protein (PhnI) CKF48_11515 PF06007 Phosphonate metabolism protein PhnJ CKF48_11520 PF00005 ABC transporter CKF48_11525 PF07969 Amidohydrolase family CKF48_11530 PF00005 ABC transporter CKF48_11535 PF02811 PHP domain CKF48_11545 PF00005 ABC transporter CKF48_11550 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_11555 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_11560 PF07690 Major Facilitator Superfamily CKF48_11565 PF07690 Major Facilitator Superfamily CKF48_11565 PF00083 Sugar (and other) transporter CKF48_11570 PF02423 Ornithine cyclodeaminase/mu-crystallin family CKF48_11575 PF00854 POT family CKF48_11595 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKF48_11600 PF00128 Alpha amylase, catalytic domain CKF48_11600 PF16657 Maltogenic Amylase, C-terminal domain CKF48_11605 PF04073 Aminoacyl-tRNA editing domain CKF48_11630 PF00005 ABC transporter CKF48_11635 PF00005 ABC transporter CKF48_11635 PF00664 ABC transporter transmembrane region CKF48_11640 PF13411 MerR HTH family regulatory protein CKF48_11640 PF07739 TipAS antibiotic-recognition domain CKF48_11645 PF02667 Short chain fatty acid transporter CKF48_11650 PF07995 Glucose / Sorbosone dehydrogenase CKF48_11660 PF02585 GlcNAc-PI de-N-acetylase CKF48_11665 PF08830 Protein of unknown function (DUF1806) CKF48_11670 PF08543 Phosphomethylpyrimidine kinase CKF48_11675 PF01327 Polypeptide deformylase CKF48_11685 PF12804 MobA-like NTP transferase domain CKF48_11690 PF02391 MoaE protein CKF48_11695 PF02597 ThiS family CKF48_11700 PF00899 ThiF family CKF48_11720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKF48_11725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_11725 PF00005 ABC transporter CKF48_11730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_11730 PF00005 ABC transporter CKF48_11740 PF02417 Chromate transporter CKF48_11745 PF02417 Chromate transporter CKF48_11750 PF11181 Heat induced stress protein YflT CKF48_11755 PF00989 PAS fold CKF48_11755 PF00512 His Kinase A (phospho-acceptor) domain CKF48_11755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_11760 PF02954 Bacterial regulatory protein, Fis family CKF48_11760 PF00072 Response regulator receiver domain CKF48_11760 PF00158 Sigma-54 interaction domain CKF48_11780 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_11785 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_11800 PF00376 MerR family regulatory protein CKF48_11800 PF09278 MerR, DNA binding CKF48_11815 PF12704 MacB-like periplasmic core domain CKF48_11815 PF02687 FtsX-like permease family CKF48_11820 PF02687 FtsX-like permease family CKF48_11820 PF00005 ABC transporter CKF48_11820 PF12704 MacB-like periplasmic core domain CKF48_11830 PF00999 Sodium/hydrogen exchanger family CKF48_11835 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKF48_11840 PF02801 Beta-ketoacyl synthase, C-terminal domain CKF48_11840 PF00109 Beta-ketoacyl synthase, N-terminal domain CKF48_11845 PF00501 AMP-binding enzyme CKF48_11845 PF00975 Thioesterase domain CKF48_11845 PF00550 Phosphopantetheine attachment site CKF48_11845 PF00668 Condensation domain CKF48_11845 PF13193 AMP-binding enzyme C-terminal domain CKF48_11850 PF00501 AMP-binding enzyme CKF48_11850 PF00550 Phosphopantetheine attachment site CKF48_11850 PF07993 Male sterility protein CKF48_11850 PF00668 Condensation domain CKF48_11850 PF13193 AMP-binding enzyme C-terminal domain CKF48_11855 PF00206 Lyase CKF48_11855 PF14698 Argininosuccinate lyase C-terminal CKF48_11865 PF00291 Pyridoxal-phosphate dependent enzyme CKF48_11870 PF02655 ATP-grasp domain CKF48_11870 PF00206 Lyase CKF48_11875 PF01212 Beta-eliminating lyase CKF48_11885 PF00196 Bacterial regulatory proteins, luxR family CKF48_11885 PF00072 Response regulator receiver domain CKF48_11910 PF13193 AMP-binding enzyme C-terminal domain CKF48_11910 PF00501 AMP-binding enzyme CKF48_11920 PF00205 Thiamine pyrophosphate enzyme, central domain CKF48_11920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CKF48_11920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CKF48_11925 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CKF48_11925 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CKF48_11935 PF07977 FabA-like domain CKF48_11940 PF00873 AcrB/AcrD/AcrF family CKF48_11955 PF03167 Uracil DNA glycosylase superfamily CKF48_11970 PF04241 Protein of unknown function (DUF423) CKF48_11975 PF09671 Spore coat protein (Spore_GerQ) CKF48_11980 PF07486 Cell Wall Hydrolase CKF48_11990 PF01515 Phosphate acetyl/butaryl transferase CKF48_11995 PF03099 Biotin/lipoate A/B protein ligase family CKF48_12010 PF01966 HD domain CKF48_12030 PF01361 Tautomerase enzyme CKF48_12035 PF02163 Peptidase family M50 CKF48_12040 PF08741 YwhD family CKF48_12045 PF00912 Transglycosylase CKF48_12045 PF00905 Penicillin binding protein transpeptidase domain CKF48_12055 PF00491 Arginase family CKF48_12060 PF09148 Domain of unknown function (DUF1934) CKF48_12065 PF05746 DALR anticodon binding domain CKF48_12065 PF03485 Arginyl tRNA synthetase N terminal domain CKF48_12065 PF00750 tRNA synthetases class I (R) CKF48_12080 PF03851 UV-endonuclease UvdE CKF48_12085 PF13091 PLD-like domain CKF48_12090 PF13183 4Fe-4S dicluster domain CKF48_12090 PF02754 Cysteine-rich domain CKF48_12095 PF02803 Thiolase, C-terminal domain CKF48_12095 PF00108 Thiolase, N-terminal domain CKF48_12100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CKF48_12100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CKF48_12105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_12105 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_12105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_12110 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_12110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_12110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_12120 PF01642 Methylmalonyl-CoA mutase CKF48_12120 PF02310 B12 binding domain CKF48_12125 PF05066 HB1, ASXL, restriction endonuclease HTH domain CKF48_12130 PF00117 Glutamine amidotransferase class-I CKF48_12130 PF06418 CTP synthase N-terminus CKF48_12135 PF10740 Domain of unknown function (DUF2529) CKF48_12140 PF00072 Response regulator receiver domain CKF48_12145 PF01116 Fructose-bisphosphate aldolase class-II CKF48_12150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CKF48_12155 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CKF48_12160 PF07498 Rho termination factor, N-terminal domain CKF48_12160 PF07497 Rho termination factor, RNA-binding domain CKF48_12160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CKF48_12165 PF01197 Ribosomal protein L31 CKF48_12170 PF00265 Thymidine kinase CKF48_12180 PF13536 Putative multidrug resistance efflux transporter CKF48_12185 PF00472 RF-1 domain CKF48_12185 PF03462 PCRF domain CKF48_12190 PF13847 Methyltransferase domain CKF48_12190 PF17827 PrmC N-terminal domain CKF48_12195 PF09551 Stage II sporulation protein R (spore_II_R) CKF48_12205 PF03481 Putative GTP-binding controlling metal-binding CKF48_12205 PF01300 Telomere recombination CKF48_12215 PF02659 Putative manganese efflux pump CKF48_12220 PF01451 Low molecular weight phosphotyrosine protein phosphatase CKF48_12225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKF48_12225 PF02743 Cache domain CKF48_12225 PF00672 HAMP domain CKF48_12230 PF02502 Ribose/Galactose Isomerase CKF48_12235 PF04260 Protein of unknown function (DUF436) CKF48_12240 PF00464 Serine hydroxymethyltransferase CKF48_12250 PF02350 UDP-N-acetylglucosamine 2-epimerase CKF48_12255 PF05922 Peptidase inhibitor I9 CKF48_12255 PF02225 PA domain CKF48_12255 PF00082 Subtilase family CKF48_12255 PF13860 FlgD Ig-like domain CKF48_12265 PF03899 ATP synthase I chain CKF48_12270 PF00119 ATP synthase A chain CKF48_12275 PF00137 ATP synthase subunit C CKF48_12280 PF00430 ATP synthase B/B' CF(0) CKF48_12285 PF00213 ATP synthase delta (OSCP) subunit CKF48_12290 PF00306 ATP synthase alpha/beta chain, C terminal domain CKF48_12290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CKF48_12290 PF02874 ATP synthase alpha/beta family, beta-barrel domain CKF48_12295 PF00231 ATP synthase CKF48_12300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CKF48_12300 PF02874 ATP synthase alpha/beta family, beta-barrel domain CKF48_12305 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CKF48_12305 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CKF48_12310 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CKF48_12315 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CKF48_12320 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CKF48_12325 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CKF48_12330 PF00146 NADH dehydrogenase CKF48_12335 PF00037 4Fe-4S binding domain CKF48_12340 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CKF48_12345 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CKF48_12350 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CKF48_12350 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CKF48_12350 PF00361 Proton-conducting membrane transporter CKF48_12355 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CKF48_12355 PF00361 Proton-conducting membrane transporter CKF48_12360 PF00361 Proton-conducting membrane transporter CKF48_12365 PF06612 Protein of unknown function (DUF1146) CKF48_12370 PF08680 TATA-box binding CKF48_12375 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CKF48_12380 PF08486 Stage II sporulation protein CKF48_12385 PF01551 Peptidase family M23 CKF48_12390 PF00877 NlpC/P60 family CKF48_12390 PF01476 LysM domain CKF48_12395 PF12116 Stage III sporulation protein D CKF48_12405 PF00460 Flagella basal body rod protein CKF48_12405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CKF48_12410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CKF48_12410 PF00460 Flagella basal body rod protein CKF48_12420 PF07977 FabA-like domain CKF48_12430 PF14183 YwpF-like protein CKF48_12440 PF00436 Single-strand binding protein family CKF48_12445 PF06280 Fn3-like domain CKF48_12445 PF00082 Subtilase family CKF48_12445 PF02225 PA domain CKF48_12445 PF00746 LPXTG cell wall anchor motif CKF48_12460 PF12419 SNF2 Helicase protein CKF48_12460 PF00271 Helicase conserved C-terminal domain CKF48_12460 PF00176 SNF2 family N-terminal domain CKF48_12480 PF05675 Protein of unknown function (DUF817) CKF48_12530 PF03600 Citrate transporter CKF48_12535 PF12431 Transcriptional regulator CKF48_12535 PF00072 Response regulator receiver domain CKF48_12540 PF00072 Response regulator receiver domain CKF48_12540 PF12431 Transcriptional regulator CKF48_12545 PF17203 Single cache domain 3 CKF48_12545 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CKF48_12545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_12545 PF00989 PAS fold CKF48_12550 PF02082 Transcriptional regulator CKF48_12555 PF13460 NAD(P)H-binding CKF48_12560 PF02768 DNA polymerase III beta subunit, C-terminal domain CKF48_12560 PF02767 DNA polymerase III beta subunit, central domain CKF48_12560 PF00712 DNA polymerase III beta subunit, N-terminal domain CKF48_12585 PF01476 LysM domain CKF48_12585 PF00877 NlpC/P60 family CKF48_12625 PF01554 MatE CKF48_12630 PF05223 NTF2-like N-terminal transpeptidase domain CKF48_12630 PF03717 Penicillin-binding Protein dimerisation domain CKF48_12630 PF00905 Penicillin binding protein transpeptidase domain CKF48_12645 PF02595 Glycerate kinase family CKF48_12655 PF00857 Isochorismatase family CKF48_12695 PF00892 EamA-like transporter family CKF48_12705 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CKF48_12705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_12710 PF00005 ABC transporter CKF48_12710 PF09383 NIL domain CKF48_12715 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_12720 PF03180 NLPA lipoprotein CKF48_12725 PF00296 Luciferase-like monooxygenase CKF48_12730 PF00248 Aldo/keto reductase family CKF48_12735 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CKF48_12735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_12740 PF01546 Peptidase family M20/M25/M40 CKF48_12740 PF07687 Peptidase dimerisation domain CKF48_12750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKF48_12755 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_12760 PF12911 N-terminal TM domain of oligopeptide transport permease C CKF48_12760 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_12765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_12765 PF00005 ABC transporter CKF48_12770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_12770 PF00005 ABC transporter CKF48_12775 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CKF48_12775 PF13378 Enolase C-terminal domain-like CKF48_12785 PF00005 ABC transporter CKF48_12785 PF12848 ABC transporter CKF48_12785 PF16326 ABC transporter C-terminal domain CKF48_12790 PF04397 LytTr DNA-binding domain CKF48_12790 PF00072 Response regulator receiver domain CKF48_12820 PF03600 Citrate transporter CKF48_12825 PF00989 PAS fold CKF48_12825 PF02954 Bacterial regulatory protein, Fis family CKF48_12825 PF00158 Sigma-54 interaction domain CKF48_12830 PF13302 Acetyltransferase (GNAT) domain CKF48_12840 PF01557 Fumarylacetoacetate (FAA) hydrolase family CKF48_12845 PF01557 Fumarylacetoacetate (FAA) hydrolase family CKF48_12850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKF48_12850 PF03466 LysR substrate binding domain CKF48_12855 PF00701 Dihydrodipicolinate synthetase family CKF48_12860 PF00171 Aldehyde dehydrogenase family CKF48_12865 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CKF48_12865 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CKF48_12870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CKF48_12885 PF02667 Short chain fatty acid transporter CKF48_12890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKF48_12890 PF00005 ABC transporter CKF48_12900 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_12900 PF12911 N-terminal TM domain of oligopeptide transport permease C CKF48_12930 PF05360 yiaA/B two helix domain CKF48_12950 PF03551 Transcriptional regulator PadR-like family CKF48_12955 PF01791 DeoC/LacD family aldolase CKF48_12965 PF03611 PTS system sugar-specific permease component CKF48_12970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CKF48_12970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CKF48_12980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CKF48_12980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CKF48_12985 PF05036 Sporulation related domain CKF48_12985 PF01520 N-acetylmuramoyl-L-alanine amidase CKF48_12990 PF01740 STAS domain CKF48_12990 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain CKF48_12995 PF00313 'Cold-shock' DNA-binding domain CKF48_13000 PF00005 ABC transporter CKF48_13005 PF01032 FecCD transport family CKF48_13010 PF01032 FecCD transport family CKF48_13015 PF01497 Periplasmic binding protein CKF48_13025 PF00465 Iron-containing alcohol dehydrogenase CKF48_13030 PF00171 Aldehyde dehydrogenase family CKF48_13040 PF00356 Bacterial regulatory proteins, lacI family CKF48_13070 PF00255 Glutathione peroxidase CKF48_13075 PF01047 MarR family CKF48_13095 PF01047 MarR family CKF48_13105 PF16123 Hydroxyacylglutathione hydrolase C-terminus CKF48_13105 PF00753 Metallo-beta-lactamase superfamily CKF48_13110 PF00300 Histidine phosphatase superfamily (branch 1) CKF48_13130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_13130 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_13130 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CKF48_13140 PF00005 ABC transporter CKF48_13145 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKF48_13150 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_13155 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_13160 PF03551 Transcriptional regulator PadR-like family CKF48_13180 PF07687 Peptidase dimerisation domain CKF48_13180 PF01546 Peptidase family M20/M25/M40 CKF48_13190 PF00465 Iron-containing alcohol dehydrogenase CKF48_13200 PF00171 Aldehyde dehydrogenase family CKF48_13205 PF02627 Carboxymuconolactone decarboxylase family CKF48_13215 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CKF48_13230 PF01425 Amidase CKF48_13255 PF00881 Nitroreductase family CKF48_13260 PF01638 HxlR-like helix-turn-helix CKF48_13270 PF01451 Low molecular weight phosphotyrosine protein phosphatase CKF48_13290 PF08245 Mur ligase middle domain CKF48_13295 PF14102 Capsule biosynthesis CapC CKF48_13300 PF09587 Bacterial capsule synthesis protein PGA_cap CKF48_13310 PF05159 Capsule polysaccharide biosynthesis protein CKF48_13315 PF02348 Cytidylyltransferase CKF48_13320 PF00793 DAHP synthetase I family CKF48_13325 PF00571 CBS domain CKF48_13325 PF01380 SIS domain CKF48_13340 PF05159 Capsule polysaccharide biosynthesis protein CKF48_13345 PF05159 Capsule polysaccharide biosynthesis protein CKF48_13355 PF05159 Capsule polysaccharide biosynthesis protein CKF48_13360 PF02348 Cytidylyltransferase CKF48_13365 PF00793 DAHP synthetase I family CKF48_13370 PF00571 CBS domain CKF48_13370 PF01380 SIS domain CKF48_13390 PF05159 Capsule polysaccharide biosynthesis protein CKF48_13400 PF00483 Nucleotidyl transferase CKF48_13405 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CKF48_13410 PF01061 ABC-2 type transporter CKF48_13415 PF08239 Bacterial SH3 domain CKF48_13415 PF00005 ABC transporter CKF48_13420 PF08239 Bacterial SH3 domain CKF48_13420 PF00005 ABC transporter CKF48_13425 PF03816 Cell envelope-related transcriptional attenuator domain CKF48_13430 PF05036 Sporulation related domain CKF48_13430 PF01520 N-acetylmuramoyl-L-alanine amidase CKF48_13435 PF01757 Acyltransferase family CKF48_13440 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CKF48_13445 PF01467 Cytidylyltransferase-like CKF48_13450 PF00535 Glycosyl transferase family 2 CKF48_13450 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CKF48_13455 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CKF48_13460 PF01473 Putative cell wall binding repeat CKF48_13460 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CKF48_13460 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain CKF48_13460 PF17890 Peptidoglycan hydrolase LytB WW-like domain CKF48_13470 PF03023 Lipid II flippase MurJ CKF48_13475 PF03808 Glycosyl transferase WecB/TagA/CpsF family CKF48_13480 PF00534 Glycosyl transferases group 1 CKF48_13480 PF13439 Glycosyltransferase Family 4 CKF48_13485 PF00953 Glycosyl transferase family 4 CKF48_13500 PF09186 Domain of unknown function (DUF1949) CKF48_13500 PF01205 Uncharacterized protein family UPF0029 CKF48_13505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_13505 PF07730 Histidine kinase CKF48_13505 PF05384 Sensor protein DegS CKF48_13515 PF02645 Uncharacterised protein, DegV family COG1307 CKF48_13520 PF04851 Type III restriction enzyme, res subunit CKF48_13520 PF00271 Helicase conserved C-terminal domain CKF48_13525 PF00156 Phosphoribosyl transferase domain CKF48_13535 PF04316 Anti-sigma-28 factor, FlgM CKF48_13545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CKF48_13545 PF00460 Flagella basal body rod protein CKF48_13550 PF00700 Bacterial flagellin C-terminal helical region CKF48_13550 PF00669 Bacterial flagellin N-terminal helical region CKF48_13560 PF02623 FliW protein CKF48_13570 PF00700 Bacterial flagellin C-terminal helical region CKF48_13570 PF00669 Bacterial flagellin N-terminal helical region CKF48_13575 PF03646 FlaG protein CKF48_13580 PF02465 Flagellar hook-associated protein 2 N-terminus CKF48_13580 PF07195 Flagellar hook-associated protein 2 C-terminus CKF48_13585 PF02561 Flagellar protein FliS CKF48_13600 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CKF48_13600 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CKF48_13605 PF07729 FCD domain CKF48_13605 PF00392 Bacterial regulatory proteins, gntR family CKF48_13620 PF00149 Calcineurin-like phosphoesterase CKF48_13630 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_13630 PF14785 Maltose transport system permease protein MalF P2 domain CKF48_13635 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_13640 PF08402 TOBE domain CKF48_13640 PF00005 ABC transporter CKF48_13655 PF02810 SEC-C motif CKF48_13655 PF05225 helix-turn-helix, Psq domain CKF48_13660 PF02810 SEC-C motif CKF48_13660 PF01043 SecA preprotein cross-linking domain CKF48_13660 PF07517 SecA DEAD-like domain CKF48_13660 PF07516 SecA Wing and Scaffold domain CKF48_13680 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CKF48_13680 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CKF48_13685 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CKF48_13690 PF00005 ABC transporter CKF48_13695 PF02687 FtsX-like permease family CKF48_13695 PF18075 FtsX extracellular domain CKF48_13700 PF04225 Opacity-associated protein A LysM-like domain CKF48_13700 PF01551 Peptidase family M23 CKF48_13705 PF01471 Putative peptidoglycan binding domain CKF48_13705 PF03572 Peptidase family S41 CKF48_13705 PF17820 PDZ domain CKF48_13710 PF17820 PDZ domain CKF48_13715 PF12848 ABC transporter CKF48_13715 PF00005 ABC transporter CKF48_13720 PF01047 MarR family CKF48_13725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CKF48_13730 PF01613 Flavin reductase like domain CKF48_13735 PF01738 Dienelactone hydrolase family CKF48_13740 PF03358 NADPH-dependent FMN reductase CKF48_13745 PF03358 NADPH-dependent FMN reductase CKF48_13750 PF01594 AI-2E family transporter CKF48_13760 PF17757 UvrB interaction domain CKF48_13760 PF02151 UvrB/uvrC motif CKF48_13760 PF04851 Type III restriction enzyme, res subunit CKF48_13760 PF00271 Helicase conserved C-terminal domain CKF48_13760 PF12344 Ultra-violet resistance protein B CKF48_13765 PF17755 UvrA DNA-binding domain CKF48_13765 PF17760 UvrA interaction domain CKF48_13765 PF00005 ABC transporter CKF48_13775 PF13349 Putative adhesin CKF48_13780 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CKF48_13785 PF00440 Bacterial regulatory proteins, tetR family CKF48_13795 PF01979 Amidohydrolase family CKF48_13800 PF02603 HPr Serine kinase N terminus CKF48_13800 PF07475 HPr Serine kinase C-terminal domain CKF48_13805 PF01790 Prolipoprotein diacylglyceryl transferase CKF48_13810 PF07670 Nucleoside recognition CKF48_13815 PF13419 Haloacid dehalogenase-like hydrolase CKF48_13820 PF14602 Hexapeptide repeat of succinyl-transferase CKF48_13825 PF13393 Histidyl-tRNA synthetase CKF48_13830 PF01634 ATP phosphoribosyltransferase CKF48_13835 PF00815 Histidinol dehydrogenase CKF48_13840 PF00475 Imidazoleglycerol-phosphate dehydratase CKF48_13845 PF00117 Glutamine amidotransferase class-I CKF48_13850 PF00977 Histidine biosynthesis protein CKF48_13855 PF00977 Histidine biosynthesis protein CKF48_13860 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CKF48_13860 PF01502 Phosphoribosyl-AMP cyclohydrolase CKF48_13870 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKF48_13880 PF00293 NUDIX domain CKF48_13885 PF03668 P-loop ATPase protein family CKF48_13890 PF01933 Uncharacterised protein family UPF0052 CKF48_13895 PF10298 WhiA N-terminal LAGLIDADG-like domain CKF48_13895 PF02650 WhiA C-terminal HTH domain CKF48_13895 PF14527 WhiA LAGLIDADG-like domain CKF48_13900 PF00381 PTS HPr component phosphorylation site CKF48_13910 PF00574 Clp protease CKF48_13945 PF00082 Subtilase family CKF48_13945 PF02225 PA domain CKF48_13945 PF05922 Peptidase inhibitor I9 CKF48_13945 PF13860 FlgD Ig-like domain CKF48_13975 PF04198 Putative sugar-binding domain CKF48_13980 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CKF48_13980 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CKF48_13985 PF00162 Phosphoglycerate kinase CKF48_13990 PF00121 Triosephosphate isomerase CKF48_13995 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CKF48_13995 PF01676 Metalloenzyme superfamily CKF48_14000 PF03952 Enolase, N-terminal domain CKF48_14000 PF00113 Enolase, C-terminal TIM barrel domain CKF48_14005 PF03840 Preprotein translocase SecG subunit CKF48_14010 PF12146 Serine aminopeptidase, S33 CKF48_14015 PF17876 Cold shock domain CKF48_14015 PF08206 Ribonuclease B OB domain CKF48_14015 PF00575 S1 RNA binding domain CKF48_14015 PF00773 RNB domain CKF48_14020 PF01668 SmpB protein CKF48_14035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CKF48_14040 PF01022 Bacterial regulatory protein, arsR family CKF48_14045 PF01022 Bacterial regulatory protein, arsR family CKF48_14050 PF02040 Arsenical pump membrane protein CKF48_14055 PF01451 Low molecular weight phosphotyrosine protein phosphatase CKF48_14070 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CKF48_14070 PF02142 MGS-like domain CKF48_14070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CKF48_14075 PF13452 N-terminal half of MaoC dehydratase CKF48_14085 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CKF48_14085 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CKF48_14095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_14095 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_14095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_14100 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_14100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_14100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_14105 PF00171 Aldehyde dehydrogenase family CKF48_14110 PF07690 Major Facilitator Superfamily CKF48_14115 PF09335 SNARE associated Golgi protein CKF48_14120 PF07690 Major Facilitator Superfamily CKF48_14130 PF01638 HxlR-like helix-turn-helix CKF48_14135 PF01965 DJ-1/PfpI family CKF48_14140 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKF48_14145 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_14150 PF00005 ABC transporter CKF48_14155 PF00037 4Fe-4S binding domain CKF48_14160 PF01022 Bacterial regulatory protein, arsR family CKF48_14165 PF00403 Heavy-metal-associated domain CKF48_14175 PF00293 NUDIX domain CKF48_14175 PF09297 NADH pyrophosphatase zinc ribbon domain CKF48_14185 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_14195 PF03459 TOBE domain CKF48_14195 PF17912 MalK OB fold domain CKF48_14195 PF00005 ABC transporter CKF48_14200 PF12727 PBP superfamily domain CKF48_14200 PF12728 Helix-turn-helix domain CKF48_14225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CKF48_14225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CKF48_14230 PF00158 Sigma-54 interaction domain CKF48_14230 PF02954 Bacterial regulatory protein, Fis family CKF48_14230 PF00989 PAS fold CKF48_14240 PF01144 Coenzyme A transferase CKF48_14245 PF01144 Coenzyme A transferase CKF48_14250 PF16295 Tetracyclin repressor-like, C-terminal domain CKF48_14250 PF00440 Bacterial regulatory proteins, tetR family CKF48_14255 PF03176 MMPL family CKF48_14260 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_14265 PF00005 ABC transporter CKF48_14265 PF09383 NIL domain CKF48_14270 PF03180 NLPA lipoprotein CKF48_14275 PF00465 Iron-containing alcohol dehydrogenase CKF48_14300 PF02028 BCCT, betaine/carnitine/choline family transporter CKF48_14315 PF00924 Mechanosensitive ion channel CKF48_14320 PF01470 Pyroglutamyl peptidase CKF48_14325 PF03176 MMPL family CKF48_14335 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKF48_14340 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_14345 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_14350 PF00005 ABC transporter CKF48_14500 PF01098 Cell cycle protein CKF48_14515 PF03323 Bacillus/Clostridium GerA spore germination protein CKF48_14520 PF10835 Protein of unknown function (DUF2573) CKF48_14525 PF07875 Coat F domain CKF48_14535 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CKF48_14535 PF00378 Enoyl-CoA hydratase/isomerase CKF48_14535 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CKF48_14540 PF02803 Thiolase, C-terminal domain CKF48_14540 PF00108 Thiolase, N-terminal domain CKF48_14545 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_14545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_14545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_14550 PF03960 ArsC family CKF48_14555 PF01597 Glycine cleavage H-protein CKF48_14560 PF01751 Toprim domain CKF48_14565 PF00085 Thioredoxin CKF48_14575 PF01053 Cys/Met metabolism PLP-dependent enzyme CKF48_14580 PF00005 ABC transporter CKF48_14580 PF09383 NIL domain CKF48_14585 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_14590 PF03180 NLPA lipoprotein CKF48_14595 PF00005 ABC transporter CKF48_14600 PF01458 Uncharacterized protein family (UPF0051) CKF48_14605 PF00266 Aminotransferase class-V CKF48_14610 PF01592 NifU-like N terminal domain CKF48_14615 PF01458 Uncharacterized protein family (UPF0051) CKF48_14620 PF01471 Putative peptidoglycan binding domain CKF48_14620 PF01510 N-acetylmuramoyl-L-alanine amidase CKF48_14625 PF00440 Bacterial regulatory proteins, tetR family CKF48_14635 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CKF48_14640 PF01497 Periplasmic binding protein CKF48_14645 PF01032 FecCD transport family CKF48_14650 PF01904 Protein of unknown function DUF72 CKF48_14655 PF08827 Domain of unknown function (DUF1805) CKF48_14660 PF03553 Na+/H+ antiporter family CKF48_14665 PF13458 Periplasmic binding protein CKF48_14670 PF02653 Branched-chain amino acid transport system / permease component CKF48_14675 PF02653 Branched-chain amino acid transport system / permease component CKF48_14675 PF11862 Domain of unknown function (DUF3382) CKF48_14680 PF12399 Branched-chain amino acid ATP-binding cassette transporter CKF48_14680 PF00005 ABC transporter CKF48_14685 PF00005 ABC transporter CKF48_14690 PF01551 Peptidase family M23 CKF48_14695 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CKF48_14695 PF04055 Radical SAM superfamily CKF48_14700 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CKF48_14705 PF06265 Protein of unknown function (DUF1027) CKF48_14720 PF01934 Protein of unknown function DUF86 CKF48_14725 PF13344 Haloacid dehalogenase-like hydrolase CKF48_14730 PF04608 Phosphatidylglycerophosphatase A CKF48_14740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CKF48_14740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CKF48_14745 PF08220 DeoR-like helix-turn-helix domain CKF48_14745 PF05573 NosL CKF48_14755 PF03447 Homoserine dehydrogenase, NAD binding domain CKF48_14755 PF00742 Homoserine dehydrogenase CKF48_14755 PF01842 ACT domain CKF48_14760 PF00291 Pyridoxal-phosphate dependent enzyme CKF48_14765 PF00288 GHMP kinases N terminal domain CKF48_14765 PF08544 GHMP kinases C terminal CKF48_14770 PF01106 NifU-like domain CKF48_14775 PF07315 Protein of unknown function (DUF1462) CKF48_14780 PF03806 AbgT putative transporter family CKF48_14805 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKF48_14810 PF07293 Protein of unknown function (DUF1450) CKF48_14815 PF01521 Iron-sulphur cluster biosynthesis CKF48_14820 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKF48_14825 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKF48_14830 PF00293 NUDIX domain CKF48_14830 PF13344 Haloacid dehalogenase-like hydrolase CKF48_14835 PF00392 Bacterial regulatory proteins, gntR family CKF48_14835 PF07729 FCD domain CKF48_14850 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CKF48_14850 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CKF48_14855 PF00676 Dehydrogenase E1 component CKF48_14860 PF02780 Transketolase, C-terminal domain CKF48_14860 PF02779 Transketolase, pyrimidine binding domain CKF48_14865 PF00364 Biotin-requiring enzyme CKF48_14865 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CKF48_14865 PF02817 e3 binding domain CKF48_14870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CKF48_14870 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKF48_14875 PF14068 Putative membrane protein CKF48_14890 PF06725 3D domain CKF48_14895 PF01497 Periplasmic binding protein CKF48_14900 PF02681 Divergent PAP2 family CKF48_14905 PF00883 Cytosol aminopeptidase family, catalytic domain CKF48_14905 PF02789 Cytosol aminopeptidase family, N-terminal domain CKF48_14910 PF03553 Na+/H+ antiporter family CKF48_14910 PF13726 Na+-H+ antiporter family CKF48_14915 PF13411 MerR HTH family regulatory protein CKF48_14925 PF01235 Sodium:alanine symporter family CKF48_14930 PF17853 GGDEF-like domain CKF48_14930 PF06018 CodY GAF-like domain CKF48_14930 PF13556 PucR C-terminal helix-turn-helix domain CKF48_14935 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CKF48_14935 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CKF48_14940 PF03129 Anticodon binding domain CKF48_14940 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CKF48_14940 PF09180 Prolyl-tRNA synthetase, C-terminal CKF48_14950 PF00574 Clp protease CKF48_14965 PF03061 Thioesterase superfamily CKF48_14970 PF03334 Na+/H+ antiporter subunit CKF48_14975 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CKF48_14980 PF01899 Na+/H+ ion antiporter subunit CKF48_14985 PF00361 Proton-conducting membrane transporter CKF48_14990 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CKF48_14995 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CKF48_15000 PF13244 Domain of unknown function (DUF4040) CKF48_15000 PF00361 Proton-conducting membrane transporter CKF48_15000 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CKF48_15010 PF00929 Exonuclease CKF48_15015 PF08810 Kinase associated protein B CKF48_15020 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CKF48_15030 PF00080 Copper/zinc superoxide dismutase (SODC) CKF48_15040 PF00155 Aminotransferase class I and II CKF48_15050 PF00561 alpha/beta hydrolase fold CKF48_15050 PF08386 TAP-like protein CKF48_15060 PF00575 S1 RNA binding domain CKF48_15065 PF00465 Iron-containing alcohol dehydrogenase CKF48_15070 PF00342 Phosphoglucose isomerase CKF48_15075 PF02915 Rubrerythrin CKF48_15110 PF02254 TrkA-N domain CKF48_15110 PF07885 Ion channel CKF48_15115 PF13460 NAD(P)H-binding CKF48_15120 PF04231 Endonuclease I CKF48_15150 PF02706 Chain length determinant protein CKF48_15150 PF13807 G-rich domain on putative tyrosine kinase CKF48_15155 PF13614 AAA domain CKF48_15160 PF02719 Polysaccharide biosynthesis protein CKF48_15165 PF00483 Nucleotidyl transferase CKF48_15170 PF13439 Glycosyltransferase Family 4 CKF48_15170 PF00534 Glycosyl transferases group 1 CKF48_15175 PF01501 Glycosyl transferase family 8 CKF48_15175 PF00535 Glycosyl transferase family 2 CKF48_15180 PF00534 Glycosyl transferases group 1 CKF48_15180 PF13439 Glycosyltransferase Family 4 CKF48_15185 PF00535 Glycosyl transferase family 2 CKF48_15185 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CKF48_15195 PF16363 GDP-mannose 4,6 dehydratase CKF48_15200 PF02397 Bacterial sugar transferase CKF48_15210 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CKF48_15215 PF08671 Anti-repressor SinI CKF48_15215 PF01381 Helix-turn-helix CKF48_15225 PF00534 Glycosyl transferases group 1 CKF48_15230 PF00535 Glycosyl transferase family 2 CKF48_15260 PF00041 Fibronectin type III domain CKF48_15260 PF00704 Glycosyl hydrolases family 18 CKF48_15265 PF00664 ABC transporter transmembrane region CKF48_15265 PF00005 ABC transporter CKF48_15285 PF13181 Tetratricopeptide repeat CKF48_15285 PF00535 Glycosyl transferase family 2 CKF48_15305 PF02096 60Kd inner membrane protein CKF48_15320 PF05504 Spore germination B3/ GerAC like, C-terminal CKF48_15335 PF01638 HxlR-like helix-turn-helix CKF48_15350 PF02082 Transcriptional regulator CKF48_15355 PF02525 Flavodoxin-like fold CKF48_15375 PF02308 MgtC family CKF48_15510 PF00128 Alpha amylase, catalytic domain CKF48_15510 PF02806 Alpha amylase, C-terminal all-beta domain CKF48_15510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CKF48_15515 PF00483 Nucleotidyl transferase CKF48_15520 PF00483 Nucleotidyl transferase CKF48_15525 PF00534 Glycosyl transferases group 1 CKF48_15525 PF08323 Starch synthase catalytic domain CKF48_15530 PF00343 Carbohydrate phosphorylase CKF48_15540 PF01040 UbiA prenyltransferase family CKF48_15545 PF00425 chorismate binding enzyme CKF48_15550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CKF48_15550 PF16582 Middle domain of thiamine pyrophosphate CKF48_15550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CKF48_15555 PF00561 alpha/beta hydrolase fold CKF48_15560 PF00378 Enoyl-CoA hydratase/isomerase CKF48_15565 PF13193 AMP-binding enzyme C-terminal domain CKF48_15565 PF00501 AMP-binding enzyme CKF48_15580 PF03193 RsgA GTPase CKF48_15585 PF07561 Domain of Unknown Function (DUF1540) CKF48_15590 PF01297 Zinc-uptake complex component A periplasmic CKF48_15590 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CKF48_15595 PF00484 Carbonic anhydrase CKF48_15600 PF01809 Putative membrane protein insertion efficiency factor CKF48_15605 PF02664 S-Ribosylhomocysteinase (LuxS) CKF48_15615 PF13396 Phospholipase_D-nuclease N-terminal CKF48_15615 PF13091 PLD-like domain CKF48_15625 PF00210 Ferritin-like domain CKF48_15640 PF00293 NUDIX domain CKF48_15645 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_15650 PF00005 ABC transporter CKF48_15660 PF00326 Prolyl oligopeptidase family CKF48_15665 PF10763 Protein of unknown function (DUF2584) CKF48_15675 PF02773 S-adenosylmethionine synthetase, C-terminal domain CKF48_15675 PF00438 S-adenosylmethionine synthetase, N-terminal domain CKF48_15675 PF02772 S-adenosylmethionine synthetase, central domain CKF48_15680 PF00733 Asparagine synthase CKF48_15680 PF13537 Glutamine amidotransferase domain CKF48_15685 PF13529 Peptidase_C39 like family CKF48_15690 PF00132 Bacterial transferase hexapeptide (six repeats) CKF48_15695 PF12146 Serine aminopeptidase, S33 CKF48_15700 PF10776 Protein of unknown function (DUF2600) CKF48_15705 PF06962 Putative rRNA methylase CKF48_15710 PF16199 Radical_SAM C-terminal domain CKF48_15710 PF04055 Radical SAM superfamily CKF48_15715 PF10732 Protein of unknown function (DUF2524) CKF48_15725 PF07690 Major Facilitator Superfamily CKF48_15735 PF08264 Anticodon-binding domain of tRNA CKF48_15735 PF00133 tRNA synthetases class I (I, L, M and V) CKF48_15735 PF13603 Leucyl-tRNA synthetase, Domain 2 CKF48_15735 PF09334 tRNA synthetases class I (M) CKF48_15740 PF00581 Rhodanese-like domain CKF48_15760 PF00005 ABC transporter CKF48_15780 PF10957 Sporulation protein Cse60 CKF48_15790 PF01943 Polysaccharide biosynthesis protein CKF48_15790 PF14667 Polysaccharide biosynthesis C-terminal domain CKF48_15800 PF03600 Citrate transporter CKF48_15805 PF02515 CoA-transferase family III CKF48_15810 PF07729 FCD domain CKF48_15810 PF00392 Bacterial regulatory proteins, gntR family CKF48_15825 PF00849 RNA pseudouridylate synthase CKF48_15825 PF01479 S4 domain CKF48_15830 PF08220 DeoR-like helix-turn-helix domain CKF48_15835 PF00571 CBS domain CKF48_15835 PF00005 ABC transporter CKF48_15840 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_15845 PF01546 Peptidase family M20/M25/M40 CKF48_15850 PF01063 Amino-transferase class IV CKF48_15855 PF01594 AI-2E family transporter CKF48_15890 PF07690 Major Facilitator Superfamily CKF48_15900 PF07690 Major Facilitator Superfamily CKF48_15905 PF00291 Pyridoxal-phosphate dependent enzyme CKF48_15910 PF02834 LigT like Phosphoesterase CKF48_15920 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CKF48_15920 PF00128 Alpha amylase, catalytic domain CKF48_15920 PF17999 Pullulanase N1-terminal domain CKF48_15925 PF01636 Phosphotransferase enzyme family CKF48_15935 PF02390 Putative methyltransferase CKF48_15940 PF00753 Metallo-beta-lactamase superfamily CKF48_15950 PF05343 M42 glutamyl aminopeptidase CKF48_15955 PF01931 Protein of unknown function DUF84 CKF48_15960 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ CKF48_15970 PF00085 Thioredoxin CKF48_15975 PF07285 Protein of unknown function (DUF1444) CKF48_15980 PF09397 Ftsk gamma domain CKF48_15980 PF17854 FtsK alpha domain CKF48_15980 PF01580 FtsK/SpoIIIE family CKF48_15990 PF08245 Mur ligase middle domain CKF48_15990 PF01225 Mur ligase family, catalytic domain CKF48_15990 PF02875 Mur ligase family, glutamate ligase domain CKF48_16000 PF02073 Thermophilic metalloprotease (M29) CKF48_16010 PF12732 YtxH-like protein CKF48_16015 PF11009 Protein of unknown function (DUF2847) CKF48_16020 PF02491 SHS2 domain inserted in FTSA CKF48_16025 PF00793 DAHP synthetase I family CKF48_16025 PF01817 Chorismate mutase type II CKF48_16030 PF00356 Bacterial regulatory proteins, lacI family CKF48_16035 PF01618 MotA/TolQ/ExbB proton channel family CKF48_16040 PF00691 OmpA family CKF48_16040 PF13677 Membrane MotB of proton-channel complex MotA/MotB CKF48_16050 PF13673 Acetyltransferase (GNAT) domain CKF48_16050 PF04229 GrpB protein CKF48_16055 PF03466 LysR substrate binding domain CKF48_16055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKF48_16060 PF07690 Major Facilitator Superfamily CKF48_16065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKF48_16065 PF03466 LysR substrate binding domain CKF48_16070 PF03358 NADPH-dependent FMN reductase CKF48_16075 PF07883 Cupin domain CKF48_16095 PF00850 Histone deacetylase domain CKF48_16100 PF00571 CBS domain CKF48_16105 PF00583 Acetyltransferase (GNAT) family CKF48_16110 PF13193 AMP-binding enzyme C-terminal domain CKF48_16110 PF00501 AMP-binding enzyme CKF48_16125 PF00912 Transglycosylase CKF48_16125 PF00905 Penicillin binding protein transpeptidase domain CKF48_16130 PF00579 tRNA synthetases class I (W and Y) CKF48_16130 PF01479 S4 domain CKF48_16140 PF00535 Glycosyl transferase family 2 CKF48_16145 PF01593 Flavin containing amine oxidoreductase CKF48_16155 PF01593 Flavin containing amine oxidoreductase CKF48_16160 PF00158 Sigma-54 interaction domain CKF48_16165 PF00202 Aminotransferase class-III CKF48_16170 PF00171 Aldehyde dehydrogenase family CKF48_16185 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CKF48_16185 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CKF48_16195 PF08240 Alcohol dehydrogenase GroES-like domain CKF48_16195 PF00107 Zinc-binding dehydrogenase CKF48_16200 PF13411 MerR HTH family regulatory protein CKF48_16210 PF01479 S4 domain CKF48_16210 PF00163 Ribosomal protein S4/S9 N-terminal domain CKF48_16215 PF00990 Diguanylate cyclase, GGDEF domain CKF48_16220 PF01053 Cys/Met metabolism PLP-dependent enzyme CKF48_16225 PF13185 GAF domain CKF48_16230 PF00440 Bacterial regulatory proteins, tetR family CKF48_16235 PF02811 PHP domain CKF48_16240 PF06160 Septation ring formation regulator, EzrA CKF48_16245 PF05525 Branched-chain amino acid transport protein CKF48_16250 PF00266 Aminotransferase class-V CKF48_16255 PF02568 Thiamine biosynthesis protein (ThiI) CKF48_16255 PF02926 THUMP domain CKF48_16260 PF00269 Small, acid-soluble spore proteins, alpha/beta type CKF48_16265 PF03466 LysR substrate binding domain CKF48_16265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKF48_16270 PF00491 Arginase family CKF48_16275 PF03616 Sodium/glutamate symporter CKF48_16280 PF00501 AMP-binding enzyme CKF48_16280 PF13193 AMP-binding enzyme C-terminal domain CKF48_16285 PF07969 Amidohydrolase family CKF48_16290 PF00892 EamA-like transporter family CKF48_16295 PF01513 ATP-NAD kinase CKF48_16305 PF06271 RDD family CKF48_16310 PF11167 Protein of unknown function (DUF2953) CKF48_16315 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CKF48_16320 PF08534 Redoxin CKF48_16325 PF02384 N-6 DNA Methylase CKF48_16330 PF00871 Acetokinase family CKF48_16340 PF00994 Probable molybdopterin binding domain CKF48_16350 PF00144 Beta-lactamase CKF48_16355 PF00764 Arginosuccinate synthase CKF48_16360 PF00206 Lyase CKF48_16360 PF14698 Argininosuccinate lyase C-terminal CKF48_16365 PF00582 Universal stress protein family CKF48_16370 PF06196 Protein of unknown function (DUF997) CKF48_16375 PF00474 Sodium:solute symporter family CKF48_16380 PF00939 Sodium:sulfate symporter transmembrane region CKF48_16390 PF00557 Metallopeptidase family M24 CKF48_16390 PF01321 Creatinase/Prolidase N-terminal domain CKF48_16405 PF03061 Thioesterase superfamily CKF48_16405 PF00571 CBS domain CKF48_16405 PF07085 DRTGG domain CKF48_16405 PF00392 Bacterial regulatory proteins, gntR family CKF48_16410 PF14007 YtpI-like protein CKF48_16415 PF02272 DHHA1 domain CKF48_16415 PF01368 DHH family CKF48_16425 PF14034 Sporulation protein YtrH CKF48_16430 PF02811 PHP domain CKF48_16430 PF07733 Bacterial DNA polymerase III alpha NTPase domain CKF48_16430 PF01336 OB-fold nucleic acid binding domain CKF48_16430 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CKF48_16430 PF14579 Helix-hairpin-helix motif CKF48_16435 PF00390 Malic enzyme, N-terminal domain CKF48_16435 PF03949 Malic enzyme, NAD binding domain CKF48_16440 PF00392 Bacterial regulatory proteins, gntR family CKF48_16445 PF01039 Carboxyl transferase domain CKF48_16445 PF17848 Acetyl-coA carboxylase zinc finger domain CKF48_16450 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CKF48_16455 PF00365 Phosphofructokinase CKF48_16460 PF02887 Pyruvate kinase, alpha/beta domain CKF48_16460 PF00391 PEP-utilising enzyme, mobile domain CKF48_16460 PF00224 Pyruvate kinase, barrel domain CKF48_16465 PF00939 Sodium:sulfate symporter transmembrane region CKF48_16470 PF04186 FxsA cytoplasmic membrane protein CKF48_16475 PF01594 AI-2E family transporter CKF48_16480 PF04284 Protein of unknown function (DUF441) CKF48_16485 PF00285 Citrate synthase, C-terminal domain CKF48_16490 PF00180 Isocitrate/isopropylmalate dehydrogenase CKF48_16495 PF00056 lactate/malate dehydrogenase, NAD binding domain CKF48_16495 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CKF48_16510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_16510 PF00512 His Kinase A (phospho-acceptor) domain CKF48_16510 PF00989 PAS fold CKF48_16510 PF16736 Single Cache-like CKF48_16515 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CKF48_16515 PF01367 5'-3' exonuclease, C-terminal SAM fold CKF48_16515 PF00476 DNA polymerase family A CKF48_16520 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CKF48_16520 PF06827 Zinc finger found in FPG and IleRS CKF48_16520 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CKF48_16525 PF02659 Putative manganese efflux pump CKF48_16530 PF01121 Dephospho-CoA kinase CKF48_16535 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CKF48_16535 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CKF48_16540 PF02675 S-adenosylmethionine decarboxylase CKF48_16545 PF03477 ATP cone domain CKF48_16555 PF07319 Primosomal protein DnaI N-terminus CKF48_16555 PF01695 IstB-like ATP binding protein CKF48_16560 PF08812 YtxC-like family CKF48_16565 PF03129 Anticodon binding domain CKF48_16565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CKF48_16565 PF02824 TGS domain CKF48_16565 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CKF48_16570 PF00707 Translation initiation factor IF-3, C-terminal domain CKF48_16570 PF05198 Translation initiation factor IF-3, N-terminal domain CKF48_16575 PF01632 Ribosomal protein L35 CKF48_16580 PF00453 Ribosomal protein L20 CKF48_16585 PF06961 Protein of unknown function (DUF1294) CKF48_16590 PF09335 SNARE associated Golgi protein CKF48_16600 PF00692 dUTPase CKF48_16605 PF05343 M42 glutamyl aminopeptidase CKF48_16610 PF14098 Small, acid-soluble spore protein I CKF48_16615 PF08032 RNA 2'-O ribose methyltransferase substrate binding CKF48_16615 PF00588 SpoU rRNA Methylase family CKF48_16620 PF01409 tRNA synthetases class II core domain (F) CKF48_16620 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CKF48_16625 PF03483 B3/4 domain CKF48_16625 PF03484 tRNA synthetase B5 domain CKF48_16625 PF03147 Ferredoxin-fold anticodon binding domain CKF48_16625 PF01588 Putative tRNA binding domain CKF48_16625 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CKF48_16630 PF01351 Ribonuclease HII CKF48_16630 PF11858 Domain of unknown function (DUF3378) CKF48_16635 PF05164 Cell division protein ZapA CKF48_16640 PF02674 Colicin V production protein CKF48_16645 PF14791 DNA polymerase beta thumb CKF48_16645 PF14716 Helix-hairpin-helix domain CKF48_16645 PF02811 PHP domain CKF48_16655 PF03994 Domain of Unknown Function (DUF350) CKF48_16660 PF13193 AMP-binding enzyme C-terminal domain CKF48_16660 PF00501 AMP-binding enzyme CKF48_16665 PF00440 Bacterial regulatory proteins, tetR family CKF48_16665 PF08359 YsiA-like protein, C-terminal region CKF48_16670 PF00378 Enoyl-CoA hydratase/isomerase CKF48_16675 PF01012 Electron transfer flavoprotein domain CKF48_16680 PF00766 Electron transfer flavoprotein FAD-binding domain CKF48_16680 PF01012 Electron transfer flavoprotein domain CKF48_16685 PF00085 Thioredoxin CKF48_16690 PF08459 UvrC Helix-hairpin-helix N-terminal CKF48_16690 PF01541 GIY-YIG catalytic domain CKF48_16690 PF02151 UvrB/uvrC motif CKF48_16695 PF00696 Amino acid kinase family CKF48_16695 PF13840 ACT domain CKF48_16700 PF10702 Protein of unknown function (DUF2507) CKF48_16705 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CKF48_16710 PF02910 Fumarate reductase flavoprotein C-term CKF48_16710 PF00890 FAD binding domain CKF48_16715 PF13183 4Fe-4S dicluster domain CKF48_16715 PF13085 2Fe-2S iron-sulfur cluster binding domain CKF48_16720 PF02872 5'-nucleotidase, C-terminal domain CKF48_16720 PF00149 Calcineurin-like phosphoesterase CKF48_16725 PF03061 Thioesterase superfamily CKF48_16730 PF00196 Bacterial regulatory proteins, luxR family CKF48_16735 PF01047 MarR family CKF48_16740 PF01177 Asp/Glu/Hydantoin racemase CKF48_16745 PF00270 DEAD/DEAH box helicase CKF48_16745 PF09382 RQC domain CKF48_16745 PF16124 RecQ zinc-binding CKF48_16745 PF00271 Helicase conserved C-terminal domain CKF48_16745 PF00570 HRDC domain CKF48_16750 PF10646 Sporulation and spore germination CKF48_16755 PF01725 Ham1 family CKF48_16760 PF12850 Calcineurin-like phosphoesterase superfamily domain CKF48_16770 PF00205 Thiamine pyrophosphate enzyme, central domain CKF48_16770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CKF48_16770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CKF48_16775 PF01842 ACT domain CKF48_16775 PF10369 Small subunit of acetolactate synthase CKF48_16780 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CKF48_16780 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CKF48_16785 PF00682 HMGL-like CKF48_16785 PF08502 LeuA allosteric (dimerisation) domain CKF48_16790 PF00180 Isocitrate/isopropylmalate dehydrogenase CKF48_16795 PF00330 Aconitase family (aconitate hydratase) CKF48_16800 PF00694 Aconitase C-terminal domain CKF48_16810 PF05697 Bacterial trigger factor protein (TF) CKF48_16810 PF05698 Bacterial trigger factor protein (TF) C-terminus CKF48_16810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CKF48_16815 PF10431 C-terminal, D2-small domain, of ClpB protein CKF48_16815 PF07724 AAA domain (Cdc48 subfamily) CKF48_16815 PF06689 ClpX C4-type zinc finger CKF48_16820 PF00004 ATPase family associated with various cellular activities (AAA) CKF48_16820 PF05362 Lon protease (S16) C-terminal proteolytic domain CKF48_16825 PF05362 Lon protease (S16) C-terminal proteolytic domain CKF48_16825 PF00004 ATPase family associated with various cellular activities (AAA) CKF48_16825 PF02190 ATP-dependent protease La (LON) substrate-binding domain CKF48_16830 PF01926 50S ribosome-binding GTPase CKF48_16835 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKF48_16840 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_16845 PF00005 ABC transporter CKF48_16855 PF01488 Shikimate / quinate 5-dehydrogenase CKF48_16855 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CKF48_16855 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CKF48_16860 PF01578 Cytochrome C assembly protein CKF48_16865 PF03900 Porphobilinogen deaminase, C-terminal domain CKF48_16865 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CKF48_16875 PF00490 Delta-aminolevulinic acid dehydratase CKF48_16880 PF00202 Aminotransferase class-III CKF48_16885 PF01476 LysM domain CKF48_16885 PF01476 LysM domain CKF48_16895 PF10458 Valyl tRNA synthetase tRNA binding arm CKF48_16895 PF00133 tRNA synthetases class I (I, L, M and V) CKF48_16895 PF08264 Anticodon-binding domain of tRNA CKF48_16900 PF02875 Mur ligase family, glutamate ligase domain CKF48_16900 PF08245 Mur ligase middle domain CKF48_16925 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CKF48_16925 PF00437 Type II/IV secretion system protein CKF48_16930 PF00437 Type II/IV secretion system protein CKF48_16935 PF00482 Type II secretion system (T2SS), protein F CKF48_16940 PF07963 Prokaryotic N-terminal methylation motif CKF48_16940 PF14245 Type IV pilin PilA CKF48_16945 PF06750 Bacterial Peptidase A24 N-terminal domain CKF48_16945 PF01478 Type IV leader peptidase family CKF48_16970 PF02545 Maf-like protein CKF48_16975 PF04002 RadC-like JAB domain CKF48_16985 PF04085 rod shape-determining protein MreC CKF48_16990 PF04093 rod shape-determining protein MreD CKF48_16995 PF03775 Septum formation inhibitor MinC, C-terminal domain CKF48_17000 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CKF48_17005 PF01551 Peptidase family M23 CKF48_17010 PF02163 Peptidase family M50 CKF48_17015 PF10150 Ribonuclease E/G family CKF48_17015 PF00575 S1 RNA binding domain CKF48_17020 PF00829 Ribosomal prokaryotic L21 protein CKF48_17025 PF04327 Cysteine protease Prp CKF48_17030 PF01016 Ribosomal L27 protein CKF48_17035 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CKF48_17035 PF14682 Sporulation initiation phospho-transferase B, C-terminal CKF48_17040 PF01018 GTP1/OBG CKF48_17040 PF09269 Domain of unknown function (DUF1967) CKF48_17040 PF01926 50S ribosome-binding GTPase CKF48_17045 PF01842 ACT domain CKF48_17050 PF00800 Prephenate dehydratase CKF48_17050 PF01842 ACT domain CKF48_17055 PF02829 3H domain CKF48_17055 PF08279 HTH domain CKF48_17060 PF00266 Aminotransferase class-V CKF48_17065 PF00890 FAD binding domain CKF48_17065 PF02910 Fumarate reductase flavoprotein C-term CKF48_17070 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CKF48_17070 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CKF48_17075 PF02445 Quinolinate synthetase A protein CKF48_17080 PF01476 LysM domain CKF48_17095 PF08977 Bypass of Forespore C, N terminal CKF48_17095 PF08955 BofC C-terminal domain CKF48_17100 PF00589 Phage integrase family CKF48_17125 PF00361 Proton-conducting membrane transporter CKF48_17130 PF01899 Na+/H+ ion antiporter subunit CKF48_17135 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CKF48_17140 PF03334 Na+/H+ antiporter subunit CKF48_17145 PF01330 RuvA N terminal domain CKF48_17145 PF07499 RuvA, C-terminal domain CKF48_17150 PF17864 RuvB AAA lid domain CKF48_17150 PF05496 Holliday junction DNA helicase RuvB P-loop domain CKF48_17150 PF05491 RuvB C-terminal winged helix domain CKF48_17155 PF11146 Protein of unknown function (DUF2905) CKF48_17165 PF01702 Queuine tRNA-ribosyltransferase CKF48_17170 PF02699 Preprotein translocase subunit CKF48_17175 PF12670 Protein of unknown function (DUF3792) CKF48_17180 PF04239 Protein of unknown function (DUF421) CKF48_17185 PF14667 Polysaccharide biosynthesis C-terminal domain CKF48_17185 PF01943 Polysaccharide biosynthesis protein CKF48_17190 PF13797 Post-transcriptional regulator CKF48_17195 PF07549 SecD/SecF GG Motif CKF48_17195 PF02355 Protein export membrane protein CKF48_17200 PF16916 Dimerisation domain of Zinc Transporter CKF48_17200 PF01545 Cation efflux family CKF48_17205 PF06305 Lipopolysaccharide assembly protein A domain CKF48_17210 PF01368 DHH family CKF48_17210 PF02272 DHHA1 domain CKF48_17210 PF17768 RecJ OB domain CKF48_17210 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CKF48_17215 PF00156 Phosphoribosyl transferase domain CKF48_17220 PF02824 TGS domain CKF48_17220 PF04607 Region found in RelA / SpoT proteins CKF48_17220 PF13291 ACT domain CKF48_17225 PF02580 D-Tyr-tRNA(Tyr) deacylase CKF48_17230 PF01520 N-acetylmuramoyl-L-alanine amidase CKF48_17230 PF08239 Bacterial SH3 domain CKF48_17235 PF03129 Anticodon binding domain CKF48_17235 PF13393 Histidyl-tRNA synthetase CKF48_17240 PF02938 GAD domain CKF48_17240 PF00152 tRNA synthetases class II (D, K and N) CKF48_17240 PF01336 OB-fold nucleic acid binding domain CKF48_17260 PF00899 ThiF family CKF48_17275 PF00392 Bacterial regulatory proteins, gntR family CKF48_17280 PF00005 ABC transporter CKF48_17285 PF00005 ABC transporter CKF48_17290 PF12679 ABC-2 family transporter protein CKF48_17295 PF01522 Polysaccharide deacetylase CKF48_17300 PF12002 MgsA AAA+ ATPase C terminal CKF48_17300 PF16193 AAA C-terminal domain CKF48_17300 PF05496 Holliday junction DNA helicase RuvB P-loop domain CKF48_17310 PF02082 Transcriptional regulator CKF48_17315 PF00266 Aminotransferase class-V CKF48_17330 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CKF48_17330 PF13538 UvrD-like helicase C-terminal domain CKF48_17330 PF14490 Helix-hairpin-helix containing domain CKF48_17345 PF13056 Protein of unknown function (DUF3918) CKF48_17350 PF01594 AI-2E family transporter CKF48_17355 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CKF48_17355 PF01411 tRNA synthetases class II (A) CKF48_17355 PF02272 DHHA1 domain CKF48_17360 PF06135 IreB regulatory phosphoprotein CKF48_17365 PF03652 Holliday junction resolvase CKF48_17370 PF06949 Protein of unknown function (DUF1292) CKF48_17375 PF02618 YceG-like family CKF48_17385 PF00485 Phosphoribulokinase / Uridine kinase family CKF48_17390 PF03449 Transcription elongation factor, N-terminal CKF48_17390 PF01272 Transcription elongation factor, GreA/GreB, C-term CKF48_17395 PF00905 Penicillin binding protein transpeptidase domain CKF48_17395 PF03717 Penicillin-binding Protein dimerisation domain CKF48_17400 PF07423 Domain of unknown function (DUF1510) CKF48_17405 PF10750 Protein of unknown function (DUF2536) CKF48_17410 PF08241 Methyltransferase domain CKF48_17415 PF01048 Phosphorylase superfamily CKF48_17420 PF00291 Pyridoxal-phosphate dependent enzyme CKF48_17425 PF01053 Cys/Met metabolism PLP-dependent enzyme CKF48_17435 PF04545 Sigma-70, region 4 CKF48_17435 PF04542 Sigma-70 region 2 CKF48_17440 PF03992 Antibiotic biosynthesis monooxygenase CKF48_17450 PF02666 Phosphatidylserine decarboxylase CKF48_17455 PF08970 Sporulation inhibitor A CKF48_17465 PF01926 50S ribosome-binding GTPase CKF48_17470 PF01488 Shikimate / quinate 5-dehydrogenase CKF48_17470 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CKF48_17470 PF08501 Shikimate dehydrogenase substrate binding domain CKF48_17475 PF01985 CRS1 / YhbY (CRM) domain CKF48_17480 PF01467 Cytidylyltransferase-like CKF48_17485 PF01966 HD domain CKF48_17495 PF13649 Methyltransferase domain CKF48_17500 PF14748 Pyrroline-5-carboxylate reductase dimerisation CKF48_17500 PF03807 NADP oxidoreductase coenzyme F420-dependent CKF48_17505 PF10531 SLBB domain CKF48_17510 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CKF48_17515 PF03772 Competence protein CKF48_17515 PF00753 Metallo-beta-lactamase superfamily CKF48_17515 PF13567 Domain of unknown function (DUF4131) CKF48_17520 PF14141 YqzM-like protein CKF48_17525 PF06144 DNA polymerase III, delta subunit CKF48_17530 PF01649 Ribosomal protein S20 CKF48_17535 PF03418 Germination protease CKF48_17540 PF12438 Protein of unknown function (DUF3679) CKF48_17545 PF00679 Elongation factor G C-terminus CKF48_17545 PF03144 Elongation factor Tu domain 2 CKF48_17545 PF06421 GTP-binding protein LepA C-terminus CKF48_17545 PF00009 Elongation factor Tu GTP binding domain CKF48_17550 PF04055 Radical SAM superfamily CKF48_17550 PF06969 HemN C-terminal domain CKF48_17555 PF01628 HrcA protein C terminal domain CKF48_17560 PF01025 GrpE CKF48_17565 PF00012 Hsp70 protein CKF48_17580 PF04452 RNA methyltransferase CKF48_17585 PF00919 Uncharacterized protein family UPF0004 CKF48_17585 PF01938 TRAM domain CKF48_17585 PF04055 Radical SAM superfamily CKF48_17595 PF01381 Helix-turn-helix CKF48_17600 PF01791 DeoC/LacD family aldolase CKF48_17605 PF02690 Na+/Pi-cotransporter CKF48_17610 PF01165 Ribosomal protein S21 CKF48_17615 PF09424 Yqey-like protein CKF48_17620 PF01957 NfeD-like C-terminal, partner-binding CKF48_17620 PF01972 Serine dehydrogenase proteinase CKF48_17625 PF12127 SigmaW regulon antibacterial CKF48_17635 PF07873 YabP family CKF48_17640 PF06898 Putative stage IV sporulation protein YqfD CKF48_17645 PF02562 PhoH-like protein CKF48_17650 PF07698 7TM receptor with intracellular HD hydrolase CKF48_17650 PF01966 HD domain CKF48_17650 PF07697 7TM-HD extracellular CKF48_17655 PF02130 Uncharacterized protein family UPF0054 CKF48_17660 PF01219 Prokaryotic diacylglycerol kinase CKF48_17665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CKF48_17670 PF07650 KH domain CKF48_17670 PF01926 50S ribosome-binding GTPase CKF48_17675 PF14006 YqzL-like protein CKF48_17680 PF02565 Recombination protein O C terminal CKF48_17680 PF11967 Recombination protein O N terminal CKF48_17685 PF02091 Glycyl-tRNA synthetase alpha subunit CKF48_17690 PF02092 Glycyl-tRNA synthetase beta subunit CKF48_17695 PF00571 CBS domain CKF48_17695 PF08279 HTH domain CKF48_17700 PF03618 Kinase/pyrophosphorylase CKF48_17705 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CKF48_17710 PF08275 DNA primase catalytic core, N-terminal domain CKF48_17710 PF10410 DnaB-helicase binding domain of primase CKF48_17710 PF01807 CHC2 zinc finger CKF48_17715 PF04542 Sigma-70 region 2 CKF48_17715 PF00140 Sigma-70 factor, region 1.2 CKF48_17715 PF03979 Sigma-70 factor, region 1.1 CKF48_17715 PF04545 Sigma-70, region 4 CKF48_17715 PF04539 Sigma-70 region 3 CKF48_17720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_17720 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_17720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_17725 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CKF48_17730 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CKF48_17735 PF01784 NIF3 (NGG1p interacting factor 3) CKF48_17740 PF02401 LytB protein CKF48_17750 PF00270 DEAD/DEAH box helicase CKF48_17750 PF00271 Helicase conserved C-terminal domain CKF48_17755 PF01261 Xylose isomerase-like TIM barrel CKF48_17760 PF11116 Protein of unknown function (DUF2624) CKF48_17765 PF00005 ABC transporter CKF48_17770 PF00950 ABC 3 transport family CKF48_17775 PF01475 Ferric uptake regulator family CKF48_17780 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) CKF48_17790 PF04551 GcpE protein CKF48_17800 PF06691 Protein of unknown function (DUF1189) CKF48_17805 PF02690 Na+/Pi-cotransporter CKF48_17810 PF04306 Protein of unknown function (DUF456) CKF48_17815 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CKF48_17815 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CKF48_17820 PF07690 Major Facilitator Superfamily CKF48_17830 PF12849 PBP superfamily domain CKF48_17835 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_17840 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_17845 PF00005 ABC transporter CKF48_17850 PF01895 PhoU domain CKF48_17880 PF00534 Glycosyl transferases group 1 CKF48_17880 PF13439 Glycosyltransferase Family 4 CKF48_17890 PF00471 Ribosomal protein L33 CKF48_17895 PF01812 5-formyltetrahydrofolate cyclo-ligase family CKF48_17910 PF01694 Rhomboid family CKF48_17915 PF03323 Bacillus/Clostridium GerA spore germination protein CKF48_17920 PF06014 Bacterial protein of unknown function (DUF910) CKF48_17925 PF00480 ROK family CKF48_17930 PF01476 LysM domain CKF48_17930 PF00246 Zinc carboxypeptidase CKF48_17940 PF01910 Thiamine-binding protein CKF48_17945 PF10958 Protein of unknown function (DUF2759) CKF48_17950 PF00753 Metallo-beta-lactamase superfamily CKF48_17960 PF11117 Protein of unknown function (DUF2626) CKF48_17970 PF00437 Type II/IV secretion system protein CKF48_17975 PF00482 Type II secretion system (T2SS), protein F CKF48_17980 PF07963 Prokaryotic N-terminal methylation motif CKF48_17985 PF07963 Prokaryotic N-terminal methylation motif CKF48_18005 PF14038 YqzE-like protein CKF48_18010 PF11079 Bacterial protein YqhG of unknown function CKF48_18015 PF00176 SNF2 family N-terminal domain CKF48_18015 PF00271 Helicase conserved C-terminal domain CKF48_18020 PF01571 Aminomethyltransferase folate-binding domain CKF48_18020 PF08669 Glycine cleavage T-protein C-terminal barrel domain CKF48_18025 PF02347 Glycine cleavage system P-protein CKF48_18030 PF02347 Glycine cleavage system P-protein CKF48_18035 PF00581 Rhodanese-like domain CKF48_18040 PF03099 Biotin/lipoate A/B protein ligase family CKF48_18050 PF00317 Ribonucleotide reductase, all-alpha domain CKF48_18050 PF02867 Ribonucleotide reductase, barrel domain CKF48_18050 PF03477 ATP cone domain CKF48_18055 PF01734 Patatin-like phospholipase CKF48_18070 PF01220 Dehydroquinase class II CKF48_18075 PF00557 Metallopeptidase family M24 CKF48_18075 PF01321 Creatinase/Prolidase N-terminal domain CKF48_18080 PF09285 Elongation factor P, C-terminal CKF48_18080 PF08207 Elongation factor P (EF-P) KOW-like domain CKF48_18080 PF01132 Elongation factor P (EF-P) OB domain CKF48_18090 PF00245 Alkaline phosphatase CKF48_18100 PF09548 Stage III sporulation protein AB (spore_III_AB) CKF48_18105 PF06686 Stage III sporulation protein AC/AD protein family CKF48_18110 PF06686 Stage III sporulation protein AC/AD protein family CKF48_18115 PF09546 Stage III sporulation protein AE (spore_III_AE) CKF48_18120 PF09581 Stage III sporulation protein AF (Spore_III_AF) CKF48_18130 PF12685 SpoIIIAH-like protein CKF48_18135 PF00364 Biotin-requiring enzyme CKF48_18140 PF00289 Biotin carboxylase, N-terminal domain CKF48_18140 PF02785 Biotin carboxylase C-terminal domain CKF48_18140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CKF48_18145 PF03780 Asp23 family, cell envelope-related function CKF48_18150 PF01029 NusB family CKF48_18155 PF13742 OB-fold nucleic acid binding domain CKF48_18155 PF02601 Exonuclease VII, large subunit CKF48_18160 PF02609 Exonuclease VII small subunit CKF48_18165 PF00348 Polyprenyl synthetase CKF48_18170 PF02780 Transketolase, C-terminal domain CKF48_18170 PF02779 Transketolase, pyrimidine binding domain CKF48_18170 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CKF48_18175 PF01728 FtsJ-like methyltransferase CKF48_18175 PF01479 S4 domain CKF48_18180 PF01316 Arginine repressor, DNA binding domain CKF48_18180 PF02863 Arginine repressor, C-terminal domain CKF48_18185 PF13476 AAA domain CKF48_18190 PF05580 SpoIVB peptidase S55 CKF48_18190 PF17820 PDZ domain CKF48_18195 PF00072 Response regulator receiver domain CKF48_18195 PF08769 Sporulation initiation factor Spo0A C terminal CKF48_18200 PF00589 Phage integrase family CKF48_18200 PF02899 Phage integrase, N-terminal SAM-like domain CKF48_18230 PF00589 Phage integrase family CKF48_18295 PF11118 Protein of unknown function (DUF2627) CKF48_18300 PF00989 PAS fold CKF48_18300 PF02954 Bacterial regulatory protein, Fis family CKF48_18300 PF00158 Sigma-54 interaction domain CKF48_18305 PF01515 Phosphate acetyl/butaryl transferase CKF48_18310 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CKF48_18310 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CKF48_18315 PF00871 Acetokinase family CKF48_18320 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKF48_18320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CKF48_18325 PF00676 Dehydrogenase E1 component CKF48_18330 PF02780 Transketolase, C-terminal domain CKF48_18330 PF02779 Transketolase, pyrimidine binding domain CKF48_18335 PF00364 Biotin-requiring enzyme CKF48_18335 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CKF48_18335 PF02817 e3 binding domain CKF48_18340 PF01642 Methylmalonyl-CoA mutase CKF48_18345 PF02310 B12 binding domain CKF48_18345 PF01642 Methylmalonyl-CoA mutase CKF48_18355 PF06491 Disulphide isomerase CKF48_18360 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKF48_18365 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_18370 PF00005 ABC transporter CKF48_18375 PF11728 Putative aromatic acid exporter C-terminal domain CKF48_18375 PF06081 Aromatic acid exporter family member 1 CKF48_18380 PF03734 L,D-transpeptidase catalytic domain CKF48_18390 PF01039 Carboxyl transferase domain CKF48_18395 PF01546 Peptidase family M20/M25/M40 CKF48_18395 PF07687 Peptidase dimerisation domain CKF48_18405 PF00817 impB/mucB/samB family CKF48_18405 PF11799 impB/mucB/samB family C-terminal domain CKF48_18405 PF11798 IMS family HHH motif CKF48_18410 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CKF48_18410 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CKF48_18415 PF00753 Metallo-beta-lactamase superfamily CKF48_18415 PF12706 Beta-lactamase superfamily domain CKF48_18420 PF00209 Sodium:neurotransmitter symporter family CKF48_18425 PF14748 Pyrroline-5-carboxylate reductase dimerisation CKF48_18425 PF03807 NADP oxidoreductase coenzyme F420-dependent CKF48_18430 PF00753 Metallo-beta-lactamase superfamily CKF48_18435 PF00106 short chain dehydrogenase CKF48_18440 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CKF48_18445 PF00817 impB/mucB/samB family CKF48_18445 PF11799 impB/mucB/samB family C-terminal domain CKF48_18445 PF11798 IMS family HHH motif CKF48_18450 PF08863 YolD-like protein CKF48_18455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKF48_18455 PF03466 LysR substrate binding domain CKF48_18495 PF12146 Serine aminopeptidase, S33 CKF48_18500 PF00682 HMGL-like CKF48_18505 PF02803 Thiolase, C-terminal domain CKF48_18505 PF00108 Thiolase, N-terminal domain CKF48_18515 PF00248 Aldo/keto reductase family CKF48_18520 PF13072 Mother cell inhibitor of FtsZ CKF48_18525 PF00293 NUDIX domain CKF48_18535 PF00892 EamA-like transporter family CKF48_18545 PF01944 Stage II sporulation protein M CKF48_18550 PF01475 Ferric uptake regulator family CKF48_18555 PF14004 Protein of unknown function (DUF4227) CKF48_18560 PF02899 Phage integrase, N-terminal SAM-like domain CKF48_18560 PF00589 Phage integrase family CKF48_18565 PF01676 Metalloenzyme superfamily CKF48_18570 PF01048 Phosphorylase superfamily CKF48_18575 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CKF48_18575 PF00591 Glycosyl transferase family, a/b domain CKF48_18575 PF02885 Glycosyl transferase family, helical bundle domain CKF48_18580 PF00768 D-alanyl-D-alanine carboxypeptidase CKF48_18580 PF07943 Penicillin-binding protein 5, C-terminal domain CKF48_18585 PF01740 STAS domain CKF48_18590 PF13581 Histidine kinase-like ATPase domain CKF48_18595 PF04545 Sigma-70, region 4 CKF48_18595 PF04539 Sigma-70 region 3 CKF48_18595 PF04542 Sigma-70 region 2 CKF48_18600 PF12164 Stage V sporulation protein AA CKF48_18605 PF13782 Stage V sporulation protein AB CKF48_18610 PF14097 Stage V sporulation protein AE1 CKF48_18615 PF03323 Bacillus/Clostridium GerA spore germination protein CKF48_18620 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CKF48_18620 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CKF48_18625 PF00583 Acetyltransferase (GNAT) family CKF48_18630 PF03745 Domain of unknown function (DUF309) CKF48_18640 PF02616 Segregation and condensation protein ScpA CKF48_18645 PF04079 Segregation and condensation complex subunit ScpB CKF48_18660 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CKF48_18660 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CKF48_18665 PF00768 D-alanyl-D-alanine carboxypeptidase CKF48_18665 PF07943 Penicillin-binding protein 5, C-terminal domain CKF48_18670 PF07670 Nucleoside recognition CKF48_18675 PF07670 Nucleoside recognition CKF48_18680 PF01479 S4 domain CKF48_18680 PF00849 RNA pseudouridylate synthase CKF48_18690 PF05140 ResB-like family CKF48_18695 PF01578 Cytochrome C assembly protein CKF48_18700 PF00486 Transcriptional regulatory protein, C terminal CKF48_18700 PF00072 Response regulator receiver domain CKF48_18705 PF00512 His Kinase A (phospho-acceptor) domain CKF48_18705 PF18698 Histidine kinase sensor domain CKF48_18705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_18705 PF00672 HAMP domain CKF48_18705 PF00989 PAS fold CKF48_18710 PF04542 Sigma-70 region 2 CKF48_18710 PF08281 Sigma-70, region 4 CKF48_18720 PF01551 Peptidase family M23 CKF48_18725 PF02811 PHP domain CKF48_18730 PF01842 ACT domain CKF48_18730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CKF48_18730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CKF48_18735 PF12822 ECF transporter, substrate-specific component CKF48_18745 PF14493 Helix-turn-helix domain CKF48_18755 PF02517 CPBP intramembrane metalloprotease CKF48_18760 PF01476 LysM domain CKF48_18760 PF00877 NlpC/P60 family CKF48_18765 PF10864 Protein of unknown function (DUF2663) CKF48_18770 PF00149 Calcineurin-like phosphoesterase CKF48_18775 PF05389 Negative regulator of genetic competence (MecA) CKF48_18780 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CKF48_18780 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CKF48_18790 PF00710 Asparaginase, N-terminal CKF48_18790 PF17763 Glutaminase/Asparaginase C-terminal domain CKF48_18795 PF13367 PrsW family intramembrane metalloprotease CKF48_18800 PF07486 Cell Wall Hydrolase CKF48_18800 PF01471 Putative peptidoglycan binding domain CKF48_18805 PF14620 YpeB sporulation CKF48_18805 PF03413 Peptidase propeptide and YPEB domain CKF48_18820 PF02224 Cytidylate kinase CKF48_18825 PF01553 Acyltransferase CKF48_18830 PF00575 S1 RNA binding domain CKF48_18835 PF01070 FMN-dependent dehydrogenase CKF48_18840 PF14140 YpzI-like protein CKF48_18850 PF14045 YIEGIA protein CKF48_18860 PF01926 50S ribosome-binding GTPase CKF48_18860 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CKF48_18865 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CKF48_18865 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CKF48_18870 PF10966 Protein of unknown function (DUF2768) CKF48_18880 PF09547 Stage IV sporulation protein A (spore_IV_A) CKF48_18885 PF00216 Bacterial DNA-binding protein CKF48_18890 PF01227 GTP cyclohydrolase I CKF48_18895 PF02081 Tryptophan RNA-binding attenuator protein CKF48_18900 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 CKF48_18905 PF01209 ubiE/COQ5 methyltransferase family CKF48_18910 PF00348 Polyprenyl synthetase CKF48_18915 PF00334 Nucleoside diphosphate kinase CKF48_18920 PF01739 CheR methyltransferase, SAM binding domain CKF48_18920 PF03705 CheR methyltransferase, all-alpha domain CKF48_18925 PF01264 Chorismate synthase CKF48_18930 PF01761 3-dehydroquinate synthase CKF48_18935 PF07736 Chorismate mutase type I CKF48_18940 PF00155 Aminotransferase class I and II CKF48_18945 PF01842 ACT domain CKF48_18945 PF02153 Prephenate dehydrogenase CKF48_18950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CKF48_18965 PF08858 IDEAL domain CKF48_18965 PF08864 UPF0302 domain CKF48_18975 PF00355 Rieske [2Fe-2S] domain CKF48_18980 PF00033 Cytochrome b/b6/petB CKF48_18985 PF00032 Cytochrome b(C-terminal)/b6/petD CKF48_18985 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CKF48_18990 PF07187 Protein of unknown function (DUF1405) CKF48_19005 PF09577 Sporulation protein YpjB (SpoYpjB) CKF48_19010 PF04298 Putative neutral zinc metallopeptidase CKF48_19015 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CKF48_19015 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CKF48_19020 PF03819 MazG nucleotide pyrophosphohydrolase domain CKF48_19025 PF01113 Dihydrodipicolinate reductase, N-terminus CKF48_19025 PF05173 Dihydrodipicolinate reductase, C-terminus CKF48_19030 PF02142 MGS-like domain CKF48_19035 PF02585 GlcNAc-PI de-N-acetylase CKF48_19040 PF13439 Glycosyltransferase Family 4 CKF48_19040 PF00534 Glycosyl transferases group 1 CKF48_19045 PF13735 tRNA nucleotidyltransferase domain 2 putative CKF48_19045 PF12627 Probable RNA and SrmB- binding site of polymerase A CKF48_19045 PF01743 Poly A polymerase head domain CKF48_19050 PF08279 HTH domain CKF48_19050 PF02237 Biotin protein ligase C terminal domain CKF48_19050 PF03099 Biotin/lipoate A/B protein ligase family CKF48_19060 PF02569 Pantoate-beta-alanine ligase CKF48_19065 PF02261 Aspartate decarboxylase CKF48_19070 PF00092 von Willebrand factor type A domain CKF48_19075 PF13307 Helicase C-terminal domain CKF48_19075 PF00929 Exonuclease CKF48_19075 PF04851 Type III restriction enzyme, res subunit CKF48_19080 PF14084 Protein of unknown function (DUF4264) CKF48_19090 PF00155 Aminotransferase class I and II CKF48_19095 PF00152 tRNA synthetases class II (D, K and N) CKF48_19095 PF01336 OB-fold nucleic acid binding domain CKF48_19100 PF07261 Replication initiation and membrane attachment CKF48_19105 PF10576 Iron-sulfur binding domain of endonuclease III CKF48_19105 PF00633 Helix-hairpin-helix motif CKF48_19105 PF00730 HhH-GPD superfamily base excision DNA repair protein CKF48_19115 PF00905 Penicillin binding protein transpeptidase domain CKF48_19115 PF00912 Transglycosylase CKF48_19120 PF03838 Recombination protein U CKF48_19145 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_19150 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_19150 PF12911 N-terminal TM domain of oligopeptide transport permease C CKF48_19155 PF00011 Hsp20/alpha crystallin family CKF48_19160 PF00270 DEAD/DEAH box helicase CKF48_19160 PF09369 Domain of unknown function (DUF1998) CKF48_19160 PF00271 Helicase conserved C-terminal domain CKF48_19165 PF13482 RNase_H superfamily CKF48_19180 PF06908 YspA SLOG family CKF48_19185 PF05103 DivIVA protein CKF48_19195 PF01170 Putative RNA methylase family UPF0020 CKF48_19195 PF02926 THUMP domain CKF48_19200 PF13307 Helicase C-terminal domain CKF48_19205 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CKF48_19210 PF00892 EamA-like transporter family CKF48_19215 PF00156 Phosphoribosyl transferase domain CKF48_19220 PF00860 Permease family CKF48_19225 PF11724 YvbH-like oligomerisation region CKF48_19225 PF08000 Bacterial PH domain CKF48_19230 PF07454 Stage II sporulation protein P (SpoIIP) CKF48_19240 PF07849 Protein of unknown function (DUF1641) CKF48_19245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CKF48_19245 PF00037 4Fe-4S binding domain CKF48_19245 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CKF48_19245 PF00384 Molybdopterin oxidoreductase CKF48_19245 PF01568 Molydopterin dinucleotide binding domain CKF48_19250 PF10057 Uncharacterized conserved protein (DUF2294) CKF48_19255 PF02634 FdhD/NarQ family CKF48_19260 PF01226 Formate/nitrite transporter CKF48_19265 PF02797 Chalcone and stilbene synthases, C-terminal domain CKF48_19265 PF00195 Chalcone and stilbene synthases, N-terminal domain CKF48_19270 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CKF48_19275 PF00350 Dynamin family CKF48_19285 PF00581 Rhodanese-like domain CKF48_19290 PF01367 5'-3' exonuclease, C-terminal SAM fold CKF48_19290 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CKF48_19295 PF11132 Transcriptional regulator protein (SplA) CKF48_19310 PF00892 EamA-like transporter family CKF48_19315 PF13456 Reverse transcriptase-like CKF48_19320 PF13456 Reverse transcriptase-like CKF48_19325 PF10782 Zinc-finger CKF48_19330 PF00313 'Cold-shock' DNA-binding domain CKF48_19340 PF01297 Zinc-uptake complex component A periplasmic CKF48_19350 PF00950 ABC 3 transport family CKF48_19355 PF00950 ABC 3 transport family CKF48_19365 PF01325 Iron dependent repressor, N-terminal DNA binding domain CKF48_19365 PF02742 Iron dependent repressor, metal binding and dimerisation domain CKF48_19370 PF08241 Methyltransferase domain CKF48_19380 PF04204 Homoserine O-succinyltransferase CKF48_19385 PF01268 Formate--tetrahydrofolate ligase CKF48_19395 PF12848 ABC transporter CKF48_19395 PF00005 ABC transporter CKF48_19395 PF16326 ABC transporter C-terminal domain CKF48_19400 PF08712 Scaffold protein Nfu/NifU N terminal CKF48_19400 PF13769 Virulence factor CKF48_19415 PF06491 Disulphide isomerase CKF48_19420 PF04445 Putative SAM-dependent methyltransferase CKF48_19425 PF00155 Aminotransferase class I and II CKF48_19430 PF14005 YpjP-like protein CKF48_19435 PF03741 Integral membrane protein TerC family CKF48_19460 PF14266 Putative component of 'biosynthetic module' CKF48_19465 PF05816 Toxic anion resistance protein (TelA) CKF48_19470 PF02342 TerD domain CKF48_19480 PF00303 Thymidylate synthase CKF48_19485 PF00186 Dihydrofolate reductase CKF48_19490 PF00291 Pyridoxal-phosphate dependent enzyme CKF48_19490 PF00585 C-terminal regulatory domain of Threonine dehydratase CKF48_19495 PF02416 mttA/Hcf106 family CKF48_19510 PF02645 Uncharacterised protein, DegV family COG1307 CKF48_19520 PF13472 GDSL-like Lipase/Acylhydrolase family CKF48_19535 PF01625 Peptide methionine sulfoxide reductase CKF48_19540 PF01641 SelR domain CKF48_19565 PF17676 LD-carboxypeptidase C-terminal domain CKF48_19565 PF02016 LD-carboxypeptidase N-terminal domain CKF48_19570 PF00202 Aminotransferase class-III CKF48_19575 PF01144 Coenzyme A transferase CKF48_19580 PF01144 Coenzyme A transferase CKF48_19585 PF01546 Peptidase family M20/M25/M40 CKF48_19585 PF07687 Peptidase dimerisation domain CKF48_19590 PF00171 Aldehyde dehydrogenase family CKF48_19600 PF02954 Bacterial regulatory protein, Fis family CKF48_19600 PF13426 PAS domain CKF48_19600 PF00158 Sigma-54 interaction domain CKF48_19605 PF12544 Lysine-2,3-aminomutase CKF48_19610 PF14122 YokU-like protein, putative antitoxin CKF48_19615 PF06855 YozE SAM-like fold CKF48_19635 PF01970 Tripartite tricarboxylate transporter TctA family CKF48_19640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_19640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_19640 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_19645 PF00501 AMP-binding enzyme CKF48_19645 PF13193 AMP-binding enzyme C-terminal domain CKF48_19650 PF14864 Alkyl sulfatase C-terminal CKF48_19650 PF00753 Metallo-beta-lactamase superfamily CKF48_19650 PF14863 Alkyl sulfatase dimerisation CKF48_19655 PF01740 STAS domain CKF48_19655 PF00916 Sulfate permease family CKF48_19665 PF14162 YozD-like protein CKF48_19670 PF03009 Glycerophosphoryl diester phosphodiesterase family CKF48_19675 PF14191 YodL-like CKF48_19680 PF01048 Phosphorylase superfamily CKF48_19685 PF02557 D-alanyl-D-alanine carboxypeptidase CKF48_19695 PF01471 Putative peptidoglycan binding domain CKF48_19695 PF03572 Peptidase family S41 CKF48_19695 PF17820 PDZ domain CKF48_19700 PF07690 Major Facilitator Superfamily CKF48_19705 PF07690 Major Facilitator Superfamily CKF48_19710 PF03816 Cell envelope-related transcriptional attenuator domain CKF48_19720 PF07683 Cobalamin synthesis protein cobW C-terminal domain CKF48_19720 PF02492 CobW/HypB/UreG, nucleotide-binding domain CKF48_19745 PF00072 Response regulator receiver domain CKF48_19745 PF00486 Transcriptional regulatory protein, C terminal CKF48_19750 PF00672 HAMP domain CKF48_19750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_19750 PF00512 His Kinase A (phospho-acceptor) domain CKF48_19755 PF00188 Cysteine-rich secretory protein family CKF48_19770 PF01593 Flavin containing amine oxidoreductase CKF48_19795 PF01979 Amidohydrolase family CKF48_19800 PF02673 Bacitracin resistance protein BacA CKF48_19810 PF04239 Protein of unknown function (DUF421) CKF48_19815 PF05163 DinB family CKF48_19830 PF00578 AhpC/TSA family CKF48_19850 PF00356 Bacterial regulatory proteins, lacI family CKF48_19855 PF00294 pfkB family carbohydrate kinase CKF48_19870 PF02653 Branched-chain amino acid transport system / permease component CKF48_19875 PF13407 Periplasmic binding protein domain CKF48_19900 PF00677 Lumazine binding domain CKF48_19905 PF00925 GTP cyclohydrolase II CKF48_19905 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CKF48_19910 PF00885 6,7-dimethyl-8-ribityllumazine synthase CKF48_19915 PF01678 Diaminopimelate epimerase CKF48_19925 PF01068 ATP dependent DNA ligase domain CKF48_19930 PF04679 ATP dependent DNA ligase C terminal region CKF48_19930 PF01068 ATP dependent DNA ligase domain CKF48_19930 PF04675 DNA ligase N terminus CKF48_19940 PF02735 Ku70/Ku80 beta-barrel domain CKF48_19945 PF01569 PAP2 superfamily CKF48_19950 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CKF48_19950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CKF48_19955 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CKF48_19955 PF01266 FAD dependent oxidoreductase CKF48_19960 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CKF48_19960 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CKF48_19965 PF00313 'Cold-shock' DNA-binding domain CKF48_19970 PF00271 Helicase conserved C-terminal domain CKF48_19970 PF00270 DEAD/DEAH box helicase CKF48_19975 PF00313 'Cold-shock' DNA-binding domain CKF48_20000 PF01235 Sodium:alanine symporter family CKF48_20005 PF02082 Transcriptional regulator CKF48_20010 PF00042 Globin CKF48_20010 PF00175 Oxidoreductase NAD-binding domain CKF48_20010 PF00970 Oxidoreductase FAD-binding domain CKF48_20015 PF08141 Small acid-soluble spore protein H family CKF48_20025 PF00403 Heavy-metal-associated domain CKF48_20030 PF00403 Heavy-metal-associated domain CKF48_20035 PF02867 Ribonucleotide reductase, barrel domain CKF48_20035 PF03477 ATP cone domain CKF48_20035 PF00317 Ribonucleotide reductase, all-alpha domain CKF48_20040 PF00268 Ribonucleotide reductase, small chain CKF48_20045 PF00486 Transcriptional regulatory protein, C terminal CKF48_20045 PF00072 Response regulator receiver domain CKF48_20050 PF00512 His Kinase A (phospho-acceptor) domain CKF48_20050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_20050 PF00672 HAMP domain CKF48_20065 PF06081 Aromatic acid exporter family member 1 CKF48_20070 PF00326 Prolyl oligopeptidase family CKF48_20075 PF00158 Sigma-54 interaction domain CKF48_20080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_20080 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_20080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_20085 PF13193 AMP-binding enzyme C-terminal domain CKF48_20085 PF00501 AMP-binding enzyme CKF48_20090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CKF48_20090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CKF48_20095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_20095 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_20095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_20100 PF00108 Thiolase, N-terminal domain CKF48_20100 PF02803 Thiolase, C-terminal domain CKF48_20105 PF00378 Enoyl-CoA hydratase/isomerase CKF48_20110 PF00478 IMP dehydrogenase / GMP reductase domain CKF48_20115 PF00501 AMP-binding enzyme CKF48_20115 PF13193 AMP-binding enzyme C-terminal domain CKF48_20130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CKF48_20130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CKF48_20135 PF07690 Major Facilitator Superfamily CKF48_20150 PF00591 Glycosyl transferase family, a/b domain CKF48_20150 PF00117 Glutamine amidotransferase class-I CKF48_20150 PF02885 Glycosyl transferase family, helical bundle domain CKF48_20155 PF02885 Glycosyl transferase family, helical bundle domain CKF48_20155 PF00591 Glycosyl transferase family, a/b domain CKF48_20160 PF00218 Indole-3-glycerol phosphate synthase CKF48_20165 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CKF48_20170 PF00291 Pyridoxal-phosphate dependent enzyme CKF48_20175 PF00290 Tryptophan synthase alpha chain CKF48_20180 PF10372 Bacterial membrane-spanning protein N-terminus CKF48_20180 PF02457 DisA bacterial checkpoint controller nucleotide-binding CKF48_20185 PF00199 Catalase CKF48_20185 PF06628 Catalase-related immune-responsive CKF48_20190 PF02586 SOS response associated peptidase (SRAP) CKF48_20200 PF13411 MerR HTH family regulatory protein CKF48_20205 PF06738 Putative threonine/serine exporter CKF48_20215 PF00933 Glycosyl hydrolase family 3 N terminal domain CKF48_20215 PF01915 Glycosyl hydrolase family 3 C-terminal domain CKF48_20220 PF00664 ABC transporter transmembrane region CKF48_20220 PF00005 ABC transporter CKF48_20225 PF00583 Acetyltransferase (GNAT) family CKF48_20225 PF00795 Carbon-nitrogen hydrolase CKF48_20240 PF04434 SWIM zinc finger CKF48_20240 PF00271 Helicase conserved C-terminal domain CKF48_20240 PF00176 SNF2 family N-terminal domain CKF48_20245 PF00877 NlpC/P60 family CKF48_20250 PF00392 Bacterial regulatory proteins, gntR family CKF48_20250 PF07729 FCD domain CKF48_20255 PF01565 FAD binding domain CKF48_20255 PF02913 FAD linked oxidases, C-terminal domain CKF48_20260 PF13183 4Fe-4S dicluster domain CKF48_20260 PF02754 Cysteine-rich domain CKF48_20265 PF02913 FAD linked oxidases, C-terminal domain CKF48_20265 PF01565 FAD binding domain CKF48_20270 PF01274 Malate synthase CKF48_20275 PF01557 Fumarylacetoacetate (FAA) hydrolase family CKF48_20280 PF01614 Bacterial transcriptional regulator CKF48_20280 PF09339 IclR helix-turn-helix domain CKF48_20285 PF02652 L-lactate permease CKF48_20295 PF08241 Methyltransferase domain CKF48_20300 PF01047 MarR family CKF48_20305 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_20305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_20305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_20310 PF02803 Thiolase, C-terminal domain CKF48_20310 PF00108 Thiolase, N-terminal domain CKF48_20315 PF00501 AMP-binding enzyme CKF48_20315 PF13193 AMP-binding enzyme C-terminal domain CKF48_20320 PF02515 CoA-transferase family III CKF48_20325 PF01066 CDP-alcohol phosphatidyltransferase CKF48_20330 PF01541 GIY-YIG catalytic domain CKF48_20335 PF12849 PBP superfamily domain CKF48_20340 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_20345 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_20355 PF01568 Molydopterin dinucleotide binding domain CKF48_20355 PF00384 Molybdopterin oxidoreductase CKF48_20355 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CKF48_20375 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CKF48_20375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CKF48_20380 PF00923 Transaldolase/Fructose-6-phosphate aldolase CKF48_20390 PF03741 Integral membrane protein TerC family CKF48_20395 PF01497 Periplasmic binding protein CKF48_20400 PF01032 FecCD transport family CKF48_20405 PF01032 FecCD transport family CKF48_20415 PF00149 Calcineurin-like phosphoesterase CKF48_20425 PF03176 MMPL family CKF48_20430 PF02146 Sir2 family CKF48_20435 PF04229 GrpB protein CKF48_20435 PF13673 Acetyltransferase (GNAT) domain CKF48_20440 PF00300 Histidine phosphatase superfamily (branch 1) CKF48_20445 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CKF48_20445 PF12833 Helix-turn-helix domain CKF48_20445 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CKF48_20445 PF02805 Metal binding domain of Ada CKF48_20450 PF07687 Peptidase dimerisation domain CKF48_20450 PF01546 Peptidase family M20/M25/M40 CKF48_20455 PF07687 Peptidase dimerisation domain CKF48_20455 PF01546 Peptidase family M20/M25/M40 CKF48_20465 PF03806 AbgT putative transporter family CKF48_20475 PF03006 Haemolysin-III related CKF48_20480 PF03070 TENA/THI-4/PQQC family CKF48_20495 PF18030 RimK PreATP-grasp domain CKF48_20495 PF08443 RimK-like ATP-grasp domain CKF48_20505 PF00202 Aminotransferase class-III CKF48_20510 PF01380 SIS domain CKF48_20520 PF00183 Hsp90 protein CKF48_20530 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CKF48_20530 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKF48_20535 PF01180 Dihydroorotate dehydrogenase CKF48_20540 PF01979 Amidohydrolase family CKF48_20545 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CKF48_20555 PF01546 Peptidase family M20/M25/M40 CKF48_20555 PF07687 Peptidase dimerisation domain CKF48_20560 PF00106 short chain dehydrogenase CKF48_20565 PF00425 chorismate binding enzyme CKF48_20570 PF13193 AMP-binding enzyme C-terminal domain CKF48_20570 PF00501 AMP-binding enzyme CKF48_20575 PF00550 Phosphopantetheine attachment site CKF48_20575 PF00857 Isochorismatase family CKF48_20580 PF00975 Thioesterase domain CKF48_20580 PF00550 Phosphopantetheine attachment site CKF48_20580 PF00668 Condensation domain CKF48_20580 PF13193 AMP-binding enzyme C-terminal domain CKF48_20580 PF00501 AMP-binding enzyme CKF48_20585 PF03621 MbtH-like protein CKF48_20590 PF07690 Major Facilitator Superfamily CKF48_20595 PF01648 4'-phosphopantetheinyl transferase superfamily CKF48_20600 PF05651 Putative sugar diacid recognition CKF48_20600 PF17853 GGDEF-like domain CKF48_20600 PF13556 PucR C-terminal helix-turn-helix domain CKF48_20605 PF00171 Aldehyde dehydrogenase family CKF48_20610 PF00202 Aminotransferase class-III CKF48_20615 PF11514 Protein of unknown function (DUF3219) CKF48_20620 PF01758 Sodium Bile acid symporter family CKF48_20625 PF07690 Major Facilitator Superfamily CKF48_20635 PF03576 Peptidase family S58 CKF48_20650 PF12802 MarR family CKF48_20655 PF00571 CBS domain CKF48_20655 PF00005 ABC transporter CKF48_20660 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_20665 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CKF48_20670 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_20680 PF00171 Aldehyde dehydrogenase family CKF48_20685 PF03006 Haemolysin-III related CKF48_20695 PF00296 Luciferase-like monooxygenase CKF48_20715 PF02463 RecF/RecN/SMC N terminal domain CKF48_20730 PF13478 XdhC Rossmann domain CKF48_20730 PF02625 XdhC and CoxI family CKF48_20735 PF12804 MobA-like NTP transferase domain CKF48_20745 PF00941 FAD binding domain in molybdopterin dehydrogenase CKF48_20745 PF03450 CO dehydrogenase flavoprotein C-terminal domain CKF48_20750 PF00111 2Fe-2S iron-sulfur cluster binding domain CKF48_20750 PF01799 [2Fe-2S] binding domain CKF48_20755 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CKF48_20755 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CKF48_20760 PF07690 Major Facilitator Superfamily CKF48_20775 PF03466 LysR substrate binding domain CKF48_20775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKF48_20780 PF02566 OsmC-like protein CKF48_20785 PF03372 Endonuclease/Exonuclease/phosphatase family CKF48_20790 PF04239 Protein of unknown function (DUF421) CKF48_20800 PF04101 Glycosyltransferase family 28 C-terminal domain CKF48_20800 PF03033 Glycosyltransferase family 28 N-terminal domain CKF48_20815 PF00293 NUDIX domain CKF48_20820 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CKF48_20820 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CKF48_20830 PF00753 Metallo-beta-lactamase superfamily CKF48_20835 PF12389 Camelysin metallo-endopeptidase CKF48_20840 PF01447 Thermolysin metallopeptidase, catalytic domain CKF48_20840 PF03413 Peptidase propeptide and YPEB domain CKF48_20840 PF07504 Fungalysin/Thermolysin Propeptide Motif CKF48_20840 PF02868 Thermolysin metallopeptidase, alpha-helical domain CKF48_20855 PF01594 AI-2E family transporter CKF48_20865 PF00149 Calcineurin-like phosphoesterase CKF48_20865 PF02872 5'-nucleotidase, C-terminal domain CKF48_20870 PF03323 Bacillus/Clostridium GerA spore germination protein CKF48_20875 PF03845 Spore germination protein CKF48_20880 PF00005 ABC transporter CKF48_20880 PF08402 TOBE domain CKF48_20885 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_20890 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_20895 PF13416 Bacterial extracellular solute-binding protein CKF48_20915 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CKF48_20915 PF13378 Enolase C-terminal domain-like CKF48_20925 PF04748 Divergent polysaccharide deacetylase CKF48_20930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_20930 PF00512 His Kinase A (phospho-acceptor) domain CKF48_20935 PF17862 AAA+ lid domain CKF48_20935 PF06480 FtsH Extracellular CKF48_20935 PF00004 ATPase family associated with various cellular activities (AAA) CKF48_20935 PF01434 Peptidase family M41 CKF48_20945 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CKF48_20950 PF00510 Cytochrome c oxidase subunit III CKF48_20960 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CKF48_20960 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CKF48_20975 PF16870 2-oxoglutarate dehydrogenase C-terminal CKF48_20975 PF00676 Dehydrogenase E1 component CKF48_20975 PF02779 Transketolase, pyrimidine binding domain CKF48_20980 PF02817 e3 binding domain CKF48_20980 PF00364 Biotin-requiring enzyme CKF48_20980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CKF48_21025 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CKF48_21030 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CKF48_21045 PF02632 BioY family CKF48_21055 PF00293 NUDIX domain CKF48_21060 PF00857 Isochorismatase family CKF48_21065 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CKF48_21065 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CKF48_21065 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CKF48_21070 PF02540 NAD synthase CKF48_21075 PF01569 PAP2 superfamily CKF48_21080 PF00188 Cysteine-rich secretory protein family CKF48_21095 PF12833 Helix-turn-helix domain CKF48_21095 PF02311 AraC-like ligand binding domain CKF48_21100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CKF48_21100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CKF48_21105 PF17391 Urocanase N-terminal domain CKF48_21105 PF17392 Urocanase C-terminal domain CKF48_21105 PF01175 Urocanase Rossmann-like domain CKF48_21110 PF01979 Amidohydrolase family CKF48_21130 PF07943 Penicillin-binding protein 5, C-terminal domain CKF48_21130 PF00768 D-alanyl-D-alanine carboxypeptidase CKF48_21135 PF04463 Protein of unknown function (DUF523) CKF48_21140 PF12848 ABC transporter CKF48_21140 PF00005 ABC transporter CKF48_21150 PF13411 MerR HTH family regulatory protein CKF48_21150 PF07739 TipAS antibiotic-recognition domain CKF48_21155 PF00171 Aldehyde dehydrogenase family CKF48_21180 PF01476 LysM domain CKF48_21180 PF06725 3D domain CKF48_21190 PF02342 TerD domain CKF48_21195 PF02342 TerD domain CKF48_21215 PF01966 HD domain CKF48_21220 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CKF48_21235 PF03480 Bacterial extracellular solute-binding protein, family 7 CKF48_21245 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CKF48_21250 PF08220 DeoR-like helix-turn-helix domain CKF48_21250 PF00455 DeoR C terminal sensor domain CKF48_21255 PF08402 TOBE domain CKF48_21255 PF00005 ABC transporter CKF48_21270 PF00266 Aminotransferase class-V CKF48_21275 PF13419 Haloacid dehalogenase-like hydrolase CKF48_21280 PF00202 Aminotransferase class-III CKF48_21285 PF03167 Uracil DNA glycosylase superfamily CKF48_21290 PF00082 Subtilase family CKF48_21300 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CKF48_21305 PF04264 YceI-like domain CKF48_21315 PF00296 Luciferase-like monooxygenase CKF48_21335 PF00487 Fatty acid desaturase CKF48_21345 PF00196 Bacterial regulatory proteins, luxR family CKF48_21345 PF00072 Response regulator receiver domain CKF48_21350 PF01063 Amino-transferase class IV CKF48_21365 PF01202 Shikimate kinase CKF48_21375 PF02581 Thiamine monophosphate synthase CKF48_21375 PF08543 Phosphomethylpyrimidine kinase CKF48_21380 PF02110 Hydroxyethylthiazole kinase family CKF48_21390 PF02525 Flavodoxin-like fold CKF48_21400 PF08439 Oligopeptidase F CKF48_21400 PF01432 Peptidase family M3 CKF48_21405 PF01266 FAD dependent oxidoreductase CKF48_21410 PF00248 Aldo/keto reductase family CKF48_21440 PF01258 Prokaryotic dksA/traR C4-type zinc finger CKF48_21445 PF00797 N-acetyltransferase CKF48_21455 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CKF48_21455 PF01565 FAD binding domain CKF48_21460 PF01613 Flavin reductase like domain CKF48_21465 PF00005 ABC transporter CKF48_21470 PF00005 ABC transporter CKF48_21470 PF00664 ABC transporter transmembrane region CKF48_21475 PF00664 ABC transporter transmembrane region CKF48_21475 PF00005 ABC transporter CKF48_21490 PF01638 HxlR-like helix-turn-helix CKF48_21495 PF03358 NADPH-dependent FMN reductase CKF48_21515 PF00471 Ribosomal protein L33 CKF48_21520 PF00253 Ribosomal protein S14p/S29e CKF48_21525 PF02492 CobW/HypB/UreG, nucleotide-binding domain CKF48_21525 PF07683 Cobalamin synthesis protein cobW C-terminal domain CKF48_21530 PF01595 Cyclin M transmembrane N-terminal domain CKF48_21530 PF00571 CBS domain CKF48_21530 PF03471 Transporter associated domain CKF48_21535 PF00571 CBS domain CKF48_21535 PF03471 Transporter associated domain CKF48_21535 PF01595 Cyclin M transmembrane N-terminal domain CKF48_21545 PF12833 Helix-turn-helix domain CKF48_21555 PF05163 DinB family CKF48_21575 PF00950 ABC 3 transport family CKF48_21585 PF01297 Zinc-uptake complex component A periplasmic CKF48_21590 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CKF48_21595 PF07690 Major Facilitator Superfamily CKF48_21610 PF00072 Response regulator receiver domain CKF48_21610 PF00196 Bacterial regulatory proteins, luxR family CKF48_21615 PF07859 alpha/beta hydrolase fold CKF48_21625 PF00171 Aldehyde dehydrogenase family CKF48_21630 PF08240 Alcohol dehydrogenase GroES-like domain CKF48_21630 PF00107 Zinc-binding dehydrogenase CKF48_21635 PF08241 Methyltransferase domain CKF48_21640 PF01699 Sodium/calcium exchanger protein CKF48_21645 PF00486 Transcriptional regulatory protein, C terminal CKF48_21645 PF00072 Response regulator receiver domain CKF48_21650 PF00512 His Kinase A (phospho-acceptor) domain CKF48_21650 PF02702 Osmosensitive K+ channel His kinase sensor domain CKF48_21650 PF13493 Domain of unknown function (DUF4118) CKF48_21650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_21655 PF00005 ABC transporter CKF48_21655 PF12704 MacB-like periplasmic core domain CKF48_21655 PF02687 FtsX-like permease family CKF48_21690 PF00293 NUDIX domain CKF48_21705 PF01174 SNO glutamine amidotransferase family CKF48_21710 PF01680 SOR/SNZ family CKF48_21715 PF00155 Aminotransferase class I and II CKF48_21715 PF00392 Bacterial regulatory proteins, gntR family CKF48_21720 PF02361 Cobalt transport protein CKF48_21725 PF00005 ABC transporter CKF48_21730 PF09819 ABC-type cobalt transport system, permease component CKF48_21755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_21755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_21755 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_21760 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CKF48_21760 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CKF48_21765 PF00171 Aldehyde dehydrogenase family CKF48_21770 PF00378 Enoyl-CoA hydratase/isomerase CKF48_21775 PF10057 Uncharacterized conserved protein (DUF2294) CKF48_21785 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKF48_21785 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CKF48_21790 PF00581 Rhodanese-like domain CKF48_21795 PF00392 Bacterial regulatory proteins, gntR family CKF48_21795 PF07729 FCD domain CKF48_21800 PF00920 Dehydratase family CKF48_21810 PF01636 Phosphotransferase enzyme family CKF48_21825 PF01773 Na+ dependent nucleoside transporter N-terminus CKF48_21825 PF07662 Na+ dependent nucleoside transporter C-terminus CKF48_21835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKF48_21835 PF00672 HAMP domain CKF48_21835 PF02203 Tar ligand binding domain homologue CKF48_21845 PF08442 ATP-grasp domain CKF48_21845 PF00549 CoA-ligase CKF48_21860 PF00378 Enoyl-CoA hydratase/isomerase CKF48_21875 PF00296 Luciferase-like monooxygenase CKF48_21890 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CKF48_21895 PF02126 Phosphotriesterase family CKF48_21900 PF00158 Sigma-54 interaction domain CKF48_21900 PF00989 PAS fold CKF48_21900 PF02954 Bacterial regulatory protein, Fis family CKF48_21905 PF03358 NADPH-dependent FMN reductase CKF48_21910 PF00589 Phage integrase family CKF48_21910 PF02899 Phage integrase, N-terminal SAM-like domain CKF48_21915 PF01507 Phosphoadenosine phosphosulfate reductase family CKF48_21930 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CKF48_21930 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CKF48_21940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CKF48_21945 PF01903 CbiX CKF48_21950 PF14824 Sirohaem biosynthesis protein central CKF48_21955 PF01925 Sulfite exporter TauE/SafE CKF48_21965 PF03466 LysR substrate binding domain CKF48_21965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKF48_21970 PF02774 Semialdehyde dehydrogenase, dimerisation domain CKF48_21970 PF01118 Semialdehyde dehydrogenase, NAD binding domain CKF48_21980 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CKF48_21980 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKF48_21985 PF00141 Peroxidase CKF48_22000 PF00158 Sigma-54 interaction domain CKF48_22000 PF00072 Response regulator receiver domain CKF48_22000 PF02954 Bacterial regulatory protein, Fis family CKF48_22015 PF01177 Asp/Glu/Hydantoin racemase CKF48_22030 PF05378 Hydantoinase/oxoprolinase N-terminal region CKF48_22030 PF01968 Hydantoinase/oxoprolinase CKF48_22045 PF02334 Replication terminator protein CKF48_22065 PF07859 alpha/beta hydrolase fold CKF48_22085 PF00204 DNA gyrase B CKF48_22085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_22085 PF01751 Toprim domain CKF48_22085 PF00986 DNA gyrase B subunit, carboxyl terminus CKF48_22090 PF13380 CoA binding domain CKF48_22095 PF02660 Glycerol-3-phosphate acyltransferase CKF48_22100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKF48_22100 PF00989 PAS fold CKF48_22100 PF00512 His Kinase A (phospho-acceptor) domain CKF48_22100 PF08447 PAS fold CKF48_22105 PF05525 Branched-chain amino acid transport protein CKF48_22110 PF05525 Branched-chain amino acid transport protein CKF48_22115 PF00392 Bacterial regulatory proteins, gntR family CKF48_22115 PF07729 FCD domain CKF48_22130 PF03061 Thioesterase superfamily CKF48_22135 PF00004 ATPase family associated with various cellular activities (AAA) CKF48_22135 PF17866 AAA lid domain CKF48_22140 PF08177 Small acid-soluble spore protein N family CKF48_22150 PF00578 AhpC/TSA family CKF48_22160 PF00330 Aconitase family (aconitate hydratase) CKF48_22160 PF00694 Aconitase C-terminal domain CKF48_22180 PF01370 NAD dependent epimerase/dehydratase family CKF48_22185 PF00155 Aminotransferase class I and II CKF48_22190 PF03358 NADPH-dependent FMN reductase CKF48_22190 PF04205 FMN-binding domain CKF48_22190 PF00890 FAD binding domain CKF48_22195 PF01475 Ferric uptake regulator family CKF48_22200 PF00149 Calcineurin-like phosphoesterase CKF48_22210 PF12848 ABC transporter CKF48_22210 PF00005 ABC transporter CKF48_22225 PF13538 UvrD-like helicase C-terminal domain CKF48_22230 PF00753 Metallo-beta-lactamase superfamily CKF48_22230 PF16123 Hydroxyacylglutathione hydrolase C-terminus CKF48_22240 PF00171 Aldehyde dehydrogenase family CKF48_22245 PF01472 PUA domain CKF48_22245 PF00696 Amino acid kinase family CKF48_22250 PF02515 CoA-transferase family III CKF48_22255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_22255 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_22255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_22260 PF00378 Enoyl-CoA hydratase/isomerase CKF48_22265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_22265 PF18158 Adaptive response protein AidB N-terminal domain CKF48_22265 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_22310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKF48_22310 PF03466 LysR substrate binding domain CKF48_22320 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CKF48_22330 PF03480 Bacterial extracellular solute-binding protein, family 7 CKF48_22335 PF02515 CoA-transferase family III CKF48_22340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_22340 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_22340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_22350 PF05683 Fumarase C-terminus CKF48_22355 PF05681 Fumarate hydratase (Fumerase) CKF48_22365 PF07729 FCD domain CKF48_22365 PF00392 Bacterial regulatory proteins, gntR family CKF48_22375 PF00180 Isocitrate/isopropylmalate dehydrogenase CKF48_22380 PF00005 ABC transporter CKF48_22385 PF03649 Uncharacterised protein family (UPF0014) CKF48_22405 PF03313 Serine dehydratase alpha chain CKF48_22410 PF01842 ACT domain CKF48_22410 PF03315 Serine dehydratase beta chain CKF48_22425 PF00884 Sulfatase CKF48_22450 PF05343 M42 glutamyl aminopeptidase CKF48_22455 PF00535 Glycosyl transferase family 2 CKF48_22465 PF00535 Glycosyl transferase family 2 CKF48_22480 PF00534 Glycosyl transferases group 1 CKF48_22485 PF16363 GDP-mannose 4,6 dehydratase CKF48_22490 PF13439 Glycosyltransferase Family 4 CKF48_22490 PF00534 Glycosyl transferases group 1 CKF48_22500 PF02719 Polysaccharide biosynthesis protein CKF48_22515 PF02811 PHP domain CKF48_22520 PF13539 D-alanyl-D-alanine carboxypeptidase CKF48_22530 PF00583 Acetyltransferase (GNAT) family CKF48_22535 PF14158 YndJ-like protein CKF48_22550 PF09084 NMT1/THI5 like CKF48_22555 PF00005 ABC transporter CKF48_22560 PF00528 Binding-protein-dependent transport system inner membrane component CKF48_22565 PF00107 Zinc-binding dehydrogenase CKF48_22565 PF08240 Alcohol dehydrogenase GroES-like domain CKF48_22570 PF07070 SpoOM protein CKF48_22575 PF02515 CoA-transferase family III CKF48_22580 PF00378 Enoyl-CoA hydratase/isomerase CKF48_22590 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_22590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_22590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_22595 PF00877 NlpC/P60 family CKF48_22595 PF01476 LysM domain CKF48_22600 PF09529 Integral membrane protein (intg_mem_TP0381) CKF48_22605 PF16884 N-terminal domain of oxidoreductase CKF48_22605 PF00107 Zinc-binding dehydrogenase CKF48_22615 PF00005 ABC transporter CKF48_22620 PF12399 Branched-chain amino acid ATP-binding cassette transporter CKF48_22620 PF00005 ABC transporter CKF48_22625 PF02653 Branched-chain amino acid transport system / permease component CKF48_22625 PF11862 Domain of unknown function (DUF3382) CKF48_22630 PF02653 Branched-chain amino acid transport system / permease component CKF48_22635 PF00501 AMP-binding enzyme CKF48_22635 PF13193 AMP-binding enzyme C-terminal domain CKF48_22640 PF00378 Enoyl-CoA hydratase/isomerase CKF48_22645 PF04029 2-phosphosulpholactate phosphatase CKF48_22660 PF00440 Bacterial regulatory proteins, tetR family CKF48_22660 PF16925 Tetracyclin repressor-like, C-terminal domain CKF48_22665 PF00108 Thiolase, N-terminal domain CKF48_22665 PF02803 Thiolase, C-terminal domain CKF48_22675 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_22675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_22675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_22695 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_22695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_22695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_22705 PF08546 Ketopantoate reductase PanE/ApbA C terminal CKF48_22705 PF02558 Ketopantoate reductase PanE/ApbA CKF48_22720 PF00583 Acetyltransferase (GNAT) family CKF48_22725 PF07690 Major Facilitator Superfamily CKF48_22735 PF12320 Type 5 capsule protein repressor C-terminal domain CKF48_22735 PF00149 Calcineurin-like phosphoesterase CKF48_22740 PF00313 'Cold-shock' DNA-binding domain CKF48_22765 PF03949 Malic enzyme, NAD binding domain CKF48_22765 PF00390 Malic enzyme, N-terminal domain CKF48_22775 PF00106 short chain dehydrogenase CKF48_22785 PF00355 Rieske [2Fe-2S] domain CKF48_22785 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CKF48_22790 PF03447 Homoserine dehydrogenase, NAD binding domain CKF48_22790 PF01958 Domain of unknown function DUF108 CKF48_22795 PF00171 Aldehyde dehydrogenase family CKF48_22800 PF00205 Thiamine pyrophosphate enzyme, central domain CKF48_22800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CKF48_22800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CKF48_22810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CKF48_22820 PF07690 Major Facilitator Superfamily CKF48_22825 PF01614 Bacterial transcriptional regulator CKF48_22825 PF09339 IclR helix-turn-helix domain CKF48_22830 PF12146 Serine aminopeptidase, S33 CKF48_22835 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) CKF48_22845 PF13193 AMP-binding enzyme C-terminal domain CKF48_22845 PF00501 AMP-binding enzyme CKF48_22850 PF00378 Enoyl-CoA hydratase/isomerase CKF48_22855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_22855 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_22855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_22860 PF00158 Sigma-54 interaction domain CKF48_22860 PF00072 Response regulator receiver domain CKF48_22860 PF02954 Bacterial regulatory protein, Fis family CKF48_22875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKF48_22875 PF02770 Acyl-CoA dehydrogenase, middle domain CKF48_22875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKF48_22920 PF08708 Primase C terminal 1 (PriCT-1) CKF48_22965 PF00877 NlpC/P60 family CKF48_23025 PF01580 FtsK/SpoIIIE family CKF48_23025 PF17854 FtsK alpha domain CKF48_23025 PF09397 Ftsk gamma domain CKF48_23025 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CKF48_23035 PF18277 AbrB C-terminal domain CKF48_23035 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CKF48_23045 PF04002 RadC-like JAB domain CKF48_23100 PF13977 BetI-type transcriptional repressor, C-terminal CKF48_23100 PF00440 Bacterial regulatory proteins, tetR family CKF48_23105 PF02796 Helix-turn-helix domain of resolvase CKF48_23105 PF00239 Resolvase, N terminal domain CKF48_23110 PF13700 Domain of unknown function (DUF4158) CKF48_23110 PF01526 Tn3 transposase DDE domain CKF48_23125 PF04542 Sigma-70 region 2 CKF48_23125 PF08281 Sigma-70, region 4 CKF48_23135 PF04055 Radical SAM superfamily CKF48_23135 PF06969 HemN C-terminal domain CKF48_23165 PF00589 Phage integrase family CKF48_23165 PF02899 Phage integrase, N-terminal SAM-like domain CKF48_23190 PF00005 ABC transporter CKF48_23215 PF09313 Domain of unknown function (DUF1971) CKF48_23215 PF03848 Tellurite resistance protein TehB CKF48_23225 PF00756 Putative esterase CKF48_23250 PF00005 ABC transporter CKF48_23250 PF00664 ABC transporter transmembrane region CKF48_23300 PF04002 RadC-like JAB domain CKF48_23320 PF07516 SecA Wing and Scaffold domain CKF48_23320 PF01043 SecA preprotein cross-linking domain CKF48_23320 PF07517 SecA DEAD-like domain CKF48_23320 PF00271 Helicase conserved C-terminal domain CKF48_23320 PF02810 SEC-C motif CKF48_23325 PF00144 Beta-lactamase CKF48_23355 PF01526 Tn3 transposase DDE domain CKF48_23355 PF13700 Domain of unknown function (DUF4158) CKF48_23365 PF00300 Histidine phosphatase superfamily (branch 1) CKF48_23375 PF00561 alpha/beta hydrolase fold CKF48_23390 PF01638 HxlR-like helix-turn-helix CKF48_23395 PF01915 Glycosyl hydrolase family 3 C-terminal domain CKF48_23395 PF00933 Glycosyl hydrolase family 3 N terminal domain CKF48_23405 PF00561 alpha/beta hydrolase fold CKF48_23410 PF01047 MarR family CKF48_23420 PF03358 NADPH-dependent FMN reductase CKF48_23420 PF04205 FMN-binding domain CKF48_23420 PF00890 FAD binding domain CKF48_23430 PF01638 HxlR-like helix-turn-helix CKF48_23440 PF13700 Domain of unknown function (DUF4158) CKF48_23440 PF01526 Tn3 transposase DDE domain CKF48_23445 PF02796 Helix-turn-helix domain of resolvase CKF48_23445 PF00239 Resolvase, N terminal domain CKF48_23470 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CKF48_23470 PF18277 AbrB C-terminal domain CKF48_23495 PF08281 Sigma-70, region 4 CKF48_23495 PF04542 Sigma-70 region 2 CKF48_23510 PF01526 Tn3 transposase DDE domain CKF48_23510 PF13700 Domain of unknown function (DUF4158) CKF48_23520 PF03845 Spore germination protein CKF48_23530 PF03323 Bacillus/Clostridium GerA spore germination protein CKF48_23535 PF02796 Helix-turn-helix domain of resolvase CKF48_23535 PF00239 Resolvase, N terminal domain CKF48_23555 PF06146 Phosphate-starvation-inducible E CKF48_23560 PF07849 Protein of unknown function (DUF1641) CKF48_23565 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CKF48_23565 PF00384 Molybdopterin oxidoreductase CKF48_23565 PF01568 Molydopterin dinucleotide binding domain CKF48_23565 PF00037 4Fe-4S binding domain CKF48_23565 PF04879 Molybdopterin oxidoreductase Fe4S4 domain