locus-tag	class	description
BkAM31D_00005	PF08299	Bacterial dnaA protein helix-turn-helix
BkAM31D_00005	PF11638	DnaA N-terminal domain
BkAM31D_00005	PF00308	Bacterial dnaA  protein
BkAM31D_00010	PF02768	DNA polymerase III beta subunit, C-terminal domain
BkAM31D_00010	PF02767	DNA polymerase III beta subunit, central domain
BkAM31D_00010	PF00712	DNA polymerase III beta subunit, N-terminal domain
BkAM31D_00020	PF02463	RecF/RecN/SMC N terminal domain
BkAM31D_00030	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_00030	PF00204	DNA gyrase B
BkAM31D_00030	PF00986	DNA gyrase B subunit, carboxyl terminus
BkAM31D_00030	PF01751	Toprim domain
BkAM31D_00035	PF00521	DNA gyrase/topoisomerase IV, subunit A
BkAM31D_00035	PF03989	DNA gyrase C-terminal domain, beta-propeller
BkAM31D_00040	PF11871	Domain of unknown function (DUF3391)
BkAM31D_00040	PF01966	HD domain
BkAM31D_00060	PF14175	YaaC-like Protein
BkAM31D_00065	PF00478	IMP dehydrogenase / GMP reductase domain
BkAM31D_00065	PF00571	CBS domain
BkAM31D_00070	PF07943	Penicillin-binding protein 5, C-terminal domain
BkAM31D_00070	PF00768	D-alanyl-D-alanine carboxypeptidase
BkAM31D_00075	PF01680	SOR/SNZ family
BkAM31D_00080	PF01174	SNO glutamine amidotransferase family
BkAM31D_00090	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BkAM31D_00090	PF02403	Seryl-tRNA synthetase N-terminal domain
BkAM31D_00095	PF00005	ABC transporter
BkAM31D_00095	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BkAM31D_00100	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BkAM31D_00100	PF00005	ABC transporter
BkAM31D_00115	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BkAM31D_00125	PF14437	MafB19-like deaminase
BkAM31D_00145	PF12169	DNA polymerase III subunits gamma and tau domain III
BkAM31D_00150	PF02575	YbaB/EbfC DNA-binding family
BkAM31D_00155	PF13662	Toprim domain
BkAM31D_00155	PF02132	RecR protein
BkAM31D_00160	PF10704	Protein of unknown function (DUF2508)
BkAM31D_00165	PF07441	SigmaK-factor processing regulatory protein BofA
BkAM31D_00195	PF00106	short chain dehydrogenase
BkAM31D_00200	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
BkAM31D_00200	PF01276	Orn/Lys/Arg decarboxylase, major domain
BkAM31D_00205	PF02223	Thymidylate kinase
BkAM31D_00210	PF06153	Cyclic-di-AMP receptor
BkAM31D_00215	PF09115	DNA polymerase III, delta subunit, C terminal
BkAM31D_00220	PF04468	PSP1 C-terminal conserved region
BkAM31D_00225	PF06156	Initiation control protein YabA
BkAM31D_00230	PF05175	Methyltransferase small domain
BkAM31D_00235	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BkAM31D_00240	PF18277	AbrB C-terminal domain
BkAM31D_00240	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
BkAM31D_00260	PF01588	Putative tRNA binding domain
BkAM31D_00260	PF09334	tRNA synthetases class I (M)
BkAM31D_00260	PF08264	Anticodon-binding domain of tRNA
BkAM31D_00265	PF01026	TatD related DNase
BkAM31D_00270	PF03990	G5-linked-Ubiquitin-like domain
BkAM31D_00270	PF07501	G5 domain
BkAM31D_00270	PF06725	3D domain
BkAM31D_00275	PF13331	Domain of unknown function (DUF4093)
BkAM31D_00275	PF13662	Toprim domain
BkAM31D_00280	PF00398	Ribosomal RNA adenine dimethylase
BkAM31D_00285	PF05582	YabG peptidase U57
BkAM31D_00290	PF06257	Biofilm formation stimulator VEG
BkAM31D_00295	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BkAM31D_00300	PF08544	GHMP kinases C terminal 
BkAM31D_00300	PF00288	GHMP kinases N terminal domain
BkAM31D_00305	PF09182	Bacterial purine repressor, N-terminal
BkAM31D_00305	PF00156	Phosphoribosyl transferase domain
BkAM31D_00310	PF01042	Endoribonuclease L-PSP
BkAM31D_00315	PF04026	SpoVG
BkAM31D_00320	PF00483	Nucleotidyl transferase
BkAM31D_00320	PF00132	Bacterial transferase hexapeptide (six repeats)
BkAM31D_00325	PF14572	Phosphoribosyl synthetase-associated domain
BkAM31D_00325	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
BkAM31D_00330	PF14693	Ribosomal protein TL5, C-terminal domain
BkAM31D_00330	PF01386	Ribosomal L25p family
BkAM31D_00335	PF01195	Peptidyl-tRNA hydrolase
BkAM31D_00340	PF10955	Protein of unknown function (DUF2757)
BkAM31D_00345	PF17757	UvrB interaction domain
BkAM31D_00345	PF03461	TRCF domain
BkAM31D_00345	PF02559	CarD-like/TRCF domain
BkAM31D_00345	PF00270	DEAD/DEAH box helicase
BkAM31D_00345	PF00271	Helicase conserved C-terminal domain
BkAM31D_00350	PF15714	Stage V sporulation protein T C-terminal, transcription factor
BkAM31D_00350	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
BkAM31D_00355	PF01943	Polysaccharide biosynthesis protein
BkAM31D_00355	PF14667	Polysaccharide biosynthesis C-terminal domain
BkAM31D_00360	PF03819	MazG nucleotide pyrophosphohydrolase domain
BkAM31D_00360	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BkAM31D_00365	PF01479	S4 domain
BkAM31D_00370	PF07873	YabP family
BkAM31D_00375	PF09578	Spore cortex protein YabQ (Spore_YabQ)
BkAM31D_00385	PF00575	S1 RNA binding domain
BkAM31D_00395	PF07228	Stage II sporulation protein E (SpoIIE)
BkAM31D_00400	PF00092	von Willebrand factor type A domain
BkAM31D_00430	PF01171	PP-loop family
BkAM31D_00430	PF09179	TilS substrate binding domain
BkAM31D_00430	PF11734	TilS substrate C-terminal domain
BkAM31D_00445	PF03309	Type III pantothenate kinase
BkAM31D_00450	PF03309	Type III pantothenate kinase
BkAM31D_00455	PF01430	Hsp33 protein
BkAM31D_00460	PF00291	Pyridoxal-phosphate dependent enzyme
BkAM31D_00465	PF04239	Protein of unknown function (DUF421)
BkAM31D_00470	PF04715	Anthranilate synthase component I, N terminal region
BkAM31D_00470	PF00425	chorismate binding enzyme
BkAM31D_00475	PF00117	Glutamine amidotransferase class-I
BkAM31D_00480	PF01063	Amino-transferase class IV
BkAM31D_00485	PF00809	Pterin binding enzyme
BkAM31D_00490	PF02152	Dihydroneopterin aldolase
BkAM31D_00495	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
BkAM31D_00500	PF01207	Dihydrouridine synthase (Dus)
BkAM31D_00505	PF00152	tRNA synthetases class II (D, K and N) 
BkAM31D_00505	PF01336	OB-fold nucleic acid binding domain
BkAM31D_00525	PF13276	HTH-like domain
BkAM31D_00525	PF00665	Integrase core domain
BkAM31D_00525	PF13333	Integrase core domain
BkAM31D_00545	PF01348	Type II intron maturase
BkAM31D_00545	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
BkAM31D_00555	PF05848	CtsR N-terminal HTH domain
BkAM31D_00555	PF17727	CtsR C-terminal dimerization domain
BkAM31D_00560	PF02151	UvrB/uvrC motif
BkAM31D_00565	PF00217	ATP:guanido phosphotransferase, C-terminal catalytic domain
BkAM31D_00570	PF10431	C-terminal, D2-small domain, of ClpB protein 
BkAM31D_00570	PF02861	Clp amino terminal domain, pathogenicity island component
BkAM31D_00570	PF17871	AAA lid domain
BkAM31D_00570	PF07724	AAA domain (Cdc48 subfamily)
BkAM31D_00570	PF00004	ATPase family associated with various cellular activities (AAA)
BkAM31D_00575	PF18073	Rubredoxin metal binding domain
BkAM31D_00580	PF10635	DisA bacterial checkpoint controller linker region 
BkAM31D_00580	PF02457	DisA bacterial checkpoint controller nucleotide-binding
BkAM31D_00590	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
BkAM31D_00595	PF02542	YgbB family
BkAM31D_00600	PF00749	tRNA synthetases class I (E and Q), catalytic domain
BkAM31D_00610	PF06426	Serine acetyltransferase, N-terminal 
BkAM31D_00610	PF00132	Bacterial transferase hexapeptide (six repeats)
BkAM31D_00615	PF01406	tRNA synthetases class I (C) catalytic domain
BkAM31D_00615	PF09190	DALR domain
BkAM31D_00620	PF00636	Ribonuclease III domain
BkAM31D_00625	PF08032	RNA 2'-O ribose methyltransferase substrate binding
BkAM31D_00625	PF00588	SpoU rRNA Methylase family
BkAM31D_00630	PF05991	YacP-like NYN domain
BkAM31D_00635	PF04542	Sigma-70 region 2 
BkAM31D_00635	PF08281	Sigma-70, region 4
BkAM31D_00640	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
BkAM31D_00645	PF02357	Transcription termination factor nusG
BkAM31D_00645	PF00467	KOW motif
BkAM31D_00650	PF00298	Ribosomal protein L11, RNA binding domain
BkAM31D_00650	PF03946	Ribosomal protein L11, N-terminal domain
BkAM31D_00655	PF00687	Ribosomal protein L1p/L10e family
BkAM31D_00665	PF00466	Ribosomal protein L10
BkAM31D_00670	PF00542	Ribosomal protein L7/L12 C-terminal domain
BkAM31D_00670	PF16320	Ribosomal protein L7/L12 dimerisation domain
BkAM31D_00675	PF05175	Methyltransferase small domain
BkAM31D_00680	PF04561	RNA polymerase Rpb2, domain 2
BkAM31D_00680	PF04565	RNA polymerase Rpb2, domain 3
BkAM31D_00680	PF04563	RNA polymerase beta subunit
BkAM31D_00680	PF10385	RNA polymerase beta subunit external 1 domain
BkAM31D_00680	PF04560	RNA polymerase Rpb2, domain 7
BkAM31D_00680	PF00562	RNA polymerase Rpb2, domain 6
BkAM31D_00685	PF05000	RNA polymerase Rpb1, domain 4
BkAM31D_00685	PF04998	RNA polymerase Rpb1, domain 5
BkAM31D_00685	PF00623	RNA polymerase Rpb1, domain 2
BkAM31D_00685	PF04983	RNA polymerase Rpb1, domain 3
BkAM31D_00685	PF04997	RNA polymerase Rpb1, domain 1
BkAM31D_00690	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
BkAM31D_00695	PF00164	Ribosomal protein S12/S23
BkAM31D_00700	PF00177	Ribosomal protein S7p/S5e
BkAM31D_00705	PF00009	Elongation factor Tu GTP binding domain
BkAM31D_00705	PF03144	Elongation factor Tu domain 2
BkAM31D_00705	PF00679	Elongation factor G C-terminus
BkAM31D_00705	PF14492	Elongation Factor G, domain II
BkAM31D_00705	PF03764	Elongation factor G, domain IV
BkAM31D_00710	PF03143	Elongation factor Tu C-terminal domain
BkAM31D_00710	PF03144	Elongation factor Tu domain 2
BkAM31D_00710	PF00009	Elongation factor Tu GTP binding domain
BkAM31D_00720	PF00338	Ribosomal protein S10p/S20e
BkAM31D_00725	PF00297	Ribosomal protein L3
BkAM31D_00730	PF00573	Ribosomal protein L4/L1 family
BkAM31D_00735	PF00276	Ribosomal protein L23
BkAM31D_00740	PF00181	Ribosomal Proteins L2, RNA binding domain
BkAM31D_00740	PF03947	Ribosomal Proteins L2, C-terminal domain
BkAM31D_00745	PF00203	Ribosomal protein S19
BkAM31D_00750	PF00237	Ribosomal protein L22p/L17e
BkAM31D_00755	PF00189	Ribosomal protein S3, C-terminal domain
BkAM31D_00755	PF07650	KH domain
BkAM31D_00760	PF00252	Ribosomal protein L16p/L10e
BkAM31D_00765	PF00831	Ribosomal L29 protein
BkAM31D_00770	PF00366	Ribosomal protein S17
BkAM31D_00775	PF00238	Ribosomal protein L14p/L23e
BkAM31D_00780	PF00467	KOW motif
BkAM31D_00780	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
BkAM31D_00785	PF00673	ribosomal L5P family C-terminus
BkAM31D_00785	PF00281	Ribosomal protein L5
BkAM31D_00790	PF00253	Ribosomal protein S14p/S29e
BkAM31D_00795	PF00410	Ribosomal protein S8
BkAM31D_00800	PF00347	Ribosomal protein L6
BkAM31D_00805	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
BkAM31D_00810	PF00333	Ribosomal protein S5, N-terminal domain
BkAM31D_00810	PF03719	Ribosomal protein S5, C-terminal domain
BkAM31D_00815	PF00327	Ribosomal protein L30p/L7e
BkAM31D_00820	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
BkAM31D_00825	PF00344	SecY translocase
BkAM31D_00830	PF05191	Adenylate kinase, active site lid
BkAM31D_00835	PF00557	Metallopeptidase family M24
BkAM31D_00845	PF01176	Translation initiation factor 1A / IF-1
BkAM31D_00850	PF00444	Ribosomal protein L36
BkAM31D_00855	PF00416	Ribosomal protein S13/S18
BkAM31D_00860	PF00411	Ribosomal protein S11
BkAM31D_00865	PF01000	RNA polymerase Rpb3/RpoA insert domain
BkAM31D_00865	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
BkAM31D_00865	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
BkAM31D_00870	PF01196	Ribosomal protein L17
BkAM31D_00875	PF00005	ABC transporter
BkAM31D_00880	PF00005	ABC transporter
BkAM31D_00885	PF00005	ABC transporter
BkAM31D_00895	PF01416	tRNA pseudouridine synthase
BkAM31D_00900	PF00572	Ribosomal protein L13
BkAM31D_00905	PF00380	Ribosomal protein S9/S16
BkAM31D_00910	PF03480	Bacterial extracellular solute-binding protein, family 7
BkAM31D_00920	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
BkAM31D_00930	PF01520	N-acetylmuramoyl-L-alanine amidase
BkAM31D_00935	PF10609	NUBPL iron-transfer P-loop NTPase
BkAM31D_00940	PF17898	Spore germination GerD central core domain
BkAM31D_00945	PF14089	KinB-signalling pathway activation in sporulation
BkAM31D_00950	PF01522	Polysaccharide deacetylase
BkAM31D_01030	PF04542	Sigma-70 region 2 
BkAM31D_01030	PF08281	Sigma-70, region 4
BkAM31D_01035	PF13490	Putative zinc-finger
BkAM31D_01040	PF02457	DisA bacterial checkpoint controller nucleotide-binding
BkAM31D_01045	PF07949	YbbR-like protein
BkAM31D_01050	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
BkAM31D_01050	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
BkAM31D_01050	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
BkAM31D_01050	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
BkAM31D_01060	PF01380	SIS domain
BkAM31D_01070	PF17934	Tetracyclin repressor-like, C-terminal domain
BkAM31D_01070	PF00440	Bacterial regulatory proteins, tetR family
BkAM31D_01075	PF03358	NADPH-dependent FMN reductase
BkAM31D_01080	PF07556	Protein of unknown function (DUF1538)
BkAM31D_01090	PF07556	Protein of unknown function (DUF1538)
BkAM31D_01100	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BkAM31D_01100	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BkAM31D_01105	PF07690	Major Facilitator Superfamily
BkAM31D_01110	PF00367	phosphotransferase system, EIIB
BkAM31D_01110	PF02378	Phosphotransferase system, EIIC 
BkAM31D_01110	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BkAM31D_01115	PF03372	Endonuclease/Exonuclease/phosphatase family
BkAM31D_01120	PF00561	alpha/beta hydrolase fold
BkAM31D_01125	PF18267	Rubredoxin NAD+ reductase C-terminal domain
BkAM31D_01125	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BkAM31D_01125	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
BkAM31D_01125	PF04324	BFD-like [2Fe-2S] binding domain
BkAM31D_01125	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
BkAM31D_01130	PF00384	Molybdopterin oxidoreductase
BkAM31D_01130	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
BkAM31D_01130	PF01568	Molydopterin dinucleotide binding domain
BkAM31D_01145	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BkAM31D_01150	PF18267	Rubredoxin NAD+ reductase C-terminal domain
BkAM31D_01150	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
BkAM31D_01150	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
BkAM31D_01150	PF04324	BFD-like [2Fe-2S] binding domain
BkAM31D_01150	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BkAM31D_01155	PF00355	Rieske [2Fe-2S] domain
BkAM31D_01160	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BkAM31D_01160	PF02378	Phosphotransferase system, EIIC 
BkAM31D_01175	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BkAM31D_01180	PF08125	Mannitol dehydrogenase C-terminal domain
BkAM31D_01180	PF01232	Mannitol dehydrogenase Rossmann domain
BkAM31D_01185	PF02602	Uroporphyrinogen-III synthase HemD
BkAM31D_01190	PF02682	Carboxyltransferase domain, subdomain C and D
BkAM31D_01195	PF02626	Carboxyltransferase domain, subdomain A and B 
BkAM31D_01200	PF03746	LamB/YcsF family
BkAM31D_01210	PF00223	Photosystem I psaA/psaB protein
BkAM31D_01210	PF00691	OmpA family
BkAM31D_01230	PF01638	HxlR-like helix-turn-helix
BkAM31D_01235	PF00582	Universal stress protein family
BkAM31D_01250	PF03448	MgtE intracellular N domain
BkAM31D_01250	PF01769	Divalent cation transporter
BkAM31D_01250	PF00571	CBS domain
BkAM31D_01270	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_01285	PF01297	Zinc-uptake complex component A periplasmic
BkAM31D_01290	PF01694	Rhomboid family
BkAM31D_01295	PF01648	4'-phosphopantetheinyl transferase superfamily
BkAM31D_01305	PF00842	Alanine racemase, C-terminal domain
BkAM31D_01305	PF01168	Alanine racemase, N-terminal domain
BkAM31D_01310	PF01402	Ribbon-helix-helix protein, copG family
BkAM31D_01315	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system
BkAM31D_01320	PF08678	Rsbr N terminal
BkAM31D_01320	PF01740	STAS domain
BkAM31D_01325	PF01740	STAS domain
BkAM31D_01330	PF13581	Histidine kinase-like ATPase domain
BkAM31D_01335	PF08673	Phosphoserine phosphatase RsbU, N-terminal domain
BkAM31D_01335	PF07228	Stage II sporulation protein E (SpoIIE)
BkAM31D_01340	PF01740	STAS domain
BkAM31D_01345	PF13581	Histidine kinase-like ATPase domain
BkAM31D_01370	PF16921	Tex protein YqgF-like domain
BkAM31D_01370	PF17674	HHH domain
BkAM31D_01370	PF09371	Tex-like protein N-terminal domain
BkAM31D_01370	PF00575	S1 RNA binding domain
BkAM31D_01380	PF17283	SprT-like zinc ribbon domain
BkAM31D_01380	PF10263	SprT-like family
BkAM31D_01460	PF01967	MoaC family
BkAM31D_01465	PF09335	SNARE associated Golgi protein
BkAM31D_01470	PF03448	MgtE intracellular N domain
BkAM31D_01470	PF00571	CBS domain
BkAM31D_01470	PF01769	Divalent cation transporter
BkAM31D_01475	PF01053	Cys/Met metabolism PLP-dependent enzyme
BkAM31D_01490	PF02769	AIR synthase related protein, C-terminal domain
BkAM31D_01490	PF00586	AIR synthase related protein, N-terminal domain
BkAM31D_01495	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
BkAM31D_01500	PF00814	Glycoprotease family
BkAM31D_01505	PF00583	Acetyltransferase (GNAT) family
BkAM31D_01510	PF00814	Glycoprotease family
BkAM31D_01530	PF00005	ABC transporter
BkAM31D_01530	PF16326	ABC transporter C-terminal domain
BkAM31D_01530	PF12848	ABC transporter
BkAM31D_01535	PF02629	CoA binding domain
BkAM31D_01535	PF06971	Putative DNA-binding protein N-terminus
BkAM31D_01540	PF02416	mttA/Hcf106 family
BkAM31D_01545	PF00902	Sec-independent protein translocase protein (TatC)
BkAM31D_01555	PF07690	Major Facilitator Superfamily
BkAM31D_01565	PF02517	CPBP intramembrane metalloprotease
BkAM31D_01570	PF00166	Chaperonin 10 Kd subunit
BkAM31D_01575	PF00118	TCP-1/cpn60 chaperonin family
BkAM31D_01580	PF00356	Bacterial regulatory proteins, lacI family
BkAM31D_01590	PF03480	Bacterial extracellular solute-binding protein, family 7
BkAM31D_01595	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
BkAM31D_01600	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
BkAM31D_01605	PF02615	Malate/L-lactate dehydrogenase
BkAM31D_01610	PF00465	Iron-containing alcohol dehydrogenase 
BkAM31D_01615	PF00171	Aldehyde dehydrogenase family
BkAM31D_01620	PF03737	Aldolase/RraA
BkAM31D_01625	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BkAM31D_01625	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BkAM31D_01635	PF02595	Glycerate kinase family
BkAM31D_01640	PF02595	Glycerate kinase family
BkAM31D_01645	PF02595	Glycerate kinase family
BkAM31D_01650	PF00311	Phosphoenolpyruvate carboxylase
BkAM31D_01680	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_01695	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BkAM31D_01695	PF00005	ABC transporter
BkAM31D_01700	PF00005	ABC transporter
BkAM31D_01700	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BkAM31D_01705	PF01554	MatE
BkAM31D_01720	PF00884	Sulfatase
BkAM31D_01720	PF16347	Domain of unknown function (DUF4976)
BkAM31D_01725	PF07478	D-ala D-ala ligase C-terminus
BkAM31D_01725	PF01820	D-ala D-ala ligase N-terminus
BkAM31D_01730	PF02875	Mur ligase family, glutamate ligase domain
BkAM31D_01730	PF01225	Mur ligase family, catalytic domain
BkAM31D_01730	PF08245	Mur ligase middle domain
BkAM31D_01740	PF02743	Cache domain
BkAM31D_01740	PF06580	Histidine kinase
BkAM31D_01740	PF00672	HAMP domain
BkAM31D_01740	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_01745	PF12833	Helix-turn-helix domain
BkAM31D_01745	PF00072	Response regulator receiver domain
BkAM31D_01760	PF00884	Sulfatase
BkAM31D_01765	PF02875	Mur ligase family, glutamate ligase domain
BkAM31D_01765	PF08245	Mur ligase middle domain
BkAM31D_01770	PF18030	RimK PreATP-grasp domain
BkAM31D_01770	PF08443	RimK-like ATP-grasp domain
BkAM31D_01785	PF00989	PAS fold
BkAM31D_01785	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_01785	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
BkAM31D_01785	PF17203	Single cache domain 3
BkAM31D_01790	PF12431	Transcriptional regulator 
BkAM31D_01790	PF00072	Response regulator receiver domain
BkAM31D_01795	PF03600	Citrate transporter
BkAM31D_01800	PF01048	Phosphorylase superfamily
BkAM31D_01805	PF02621	Menaquinone biosynthesis
BkAM31D_01810	PF02621	Menaquinone biosynthesis
BkAM31D_01825	PF07726	ATPase family associated with various cellular activities (AAA)
BkAM31D_01825	PF17863	AAA lid domain
BkAM31D_01830	PF01882	Protein of unknown function DUF58
BkAM31D_01835	PF11992	Domain of unknown function (DUF3488)
BkAM31D_01835	PF13559	Domain of unknown function (DUF4129)
BkAM31D_01835	PF01841	Transglutaminase-like superfamily
BkAM31D_01845	PF00117	Glutamine amidotransferase class-I
BkAM31D_01845	PF00958	GMP synthase C terminal domain
BkAM31D_01845	PF02540	NAD synthase
BkAM31D_01855	PF00860	Permease family
BkAM31D_01885	PF02797	Chalcone and stilbene synthases, C-terminal domain
BkAM31D_01885	PF00195	Chalcone and stilbene synthases, N-terminal domain
BkAM31D_01890	PF04140	Isoprenylcysteine carboxyl methyltransferase (ICMT) family 
BkAM31D_01895	PF14044	NETI protein
BkAM31D_01905	PF00731	AIR carboxylase
BkAM31D_01910	PF02222	ATP-grasp domain
BkAM31D_01910	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
BkAM31D_01915	PF00206	Lyase
BkAM31D_01915	PF10397	Adenylosuccinate lyase C-terminus
BkAM31D_01920	PF01259	SAICAR synthetase
BkAM31D_01925	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
BkAM31D_01935	PF02769	AIR synthase related protein, C-terminal domain
BkAM31D_01935	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
BkAM31D_01935	PF00586	AIR synthase related protein, N-terminal domain
BkAM31D_01940	PF00156	Phosphoribosyl transferase domain
BkAM31D_01945	PF00586	AIR synthase related protein, N-terminal domain
BkAM31D_01945	PF02769	AIR synthase related protein, C-terminal domain
BkAM31D_01950	PF00551	Formyl transferase
BkAM31D_01955	PF01808	AICARFT/IMPCHase bienzyme
BkAM31D_01955	PF02142	MGS-like domain
BkAM31D_01960	PF02843	Phosphoribosylglycinamide synthetase, C domain
BkAM31D_01960	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
BkAM31D_01960	PF02844	Phosphoribosylglycinamide synthetase, N domain
BkAM31D_01975	PF01979	Amidohydrolase family
BkAM31D_01975	PF13382	Adenine deaminase C-terminal domain
BkAM31D_01980	PF17479	Protein of unknown function (DUF3048) C-terminal domain
BkAM31D_01980	PF11258	Protein of unknown function (DUF3048) N-terminal domain
BkAM31D_01985	PF01371	Trp repressor protein
BkAM31D_01990	PF13382	Adenine deaminase C-terminal domain
BkAM31D_01990	PF01979	Amidohydrolase family
BkAM31D_01995	PF17853	GGDEF-like domain
BkAM31D_01995	PF06018	CodY GAF-like domain
BkAM31D_01995	PF13556	PucR C-terminal helix-turn-helix domain
BkAM31D_02015	PF01906	Putative heavy-metal-binding
BkAM31D_02025	PF03477	ATP cone domain
BkAM31D_02025	PF02867	Ribonucleotide reductase, barrel domain
BkAM31D_02025	PF00317	Ribonucleotide reductase, all-alpha domain
BkAM31D_02030	PF00268	Ribonucleotide reductase, small chain
BkAM31D_02045	PF00580	UvrD/REP helicase N-terminal domain
BkAM31D_02045	PF13361	UvrD-like helicase C-terminal domain
BkAM31D_02050	PF12826	Helix-hairpin-helix motif
BkAM31D_02050	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
BkAM31D_02050	PF03120	NAD-dependent DNA ligase OB-fold domain
BkAM31D_02050	PF01653	NAD-dependent DNA ligase adenylation domain
BkAM31D_02050	PF00533	BRCA1 C Terminus (BRCT) domain
BkAM31D_02055	PF07537	CamS sex pheromone cAM373 precursor
BkAM31D_02060	PF02608	ABC transporter substrate-binding protein PnrA-like
BkAM31D_02085	PF00474	Sodium:solute symporter family
BkAM31D_02090	PF00474	Sodium:solute symporter family
BkAM31D_02095	PF02686	Glu-tRNAGln amidotransferase C subunit
BkAM31D_02100	PF01425	Amidase
BkAM31D_02105	PF02637	GatB domain
BkAM31D_02105	PF02934	GatB/GatE catalytic domain
BkAM31D_02110	PF00781	Diacylglycerol kinase catalytic domain
BkAM31D_02115	PF01938	TRAM domain
BkAM31D_02115	PF05958	tRNA (Uracil-5-)-methyltransferase
BkAM31D_02120	PF14659	Phage integrase, N-terminal SAM-like domain
BkAM31D_02120	PF00589	Phage integrase family
BkAM31D_02135	PF01381	Helix-turn-helix
BkAM31D_02200	PF02511	Thymidylate synthase complementing protein
BkAM31D_02230	PF08346	AntA/AntB antirepressor
BkAM31D_02230	PF10548	P22AR C-terminal domain
BkAM31D_02290	PF00436	Single-strand binding protein family
BkAM31D_02360	PF03592	Terminase small subunit 
BkAM31D_02360	PF10668	Phage terminase small subunit
BkAM31D_02505	PF13443	Cro/C1-type HTH DNA-binding domain
BkAM31D_02510	PF00589	Phage integrase family
BkAM31D_02510	PF02899	Phage integrase, N-terminal SAM-like domain
BkAM31D_02575	PF00107	Zinc-binding dehydrogenase
BkAM31D_02575	PF08240	Alcohol dehydrogenase GroES-like domain
BkAM31D_02585	PF00356	Bacterial regulatory proteins, lacI family
BkAM31D_02590	PF00128	Alpha amylase, catalytic domain
BkAM31D_02590	PF16657	Maltogenic Amylase, C-terminal domain
BkAM31D_02595	PF02378	Phosphotransferase system, EIIC 
BkAM31D_02595	PF00367	phosphotransferase system, EIIB
BkAM31D_02600	PF02378	Phosphotransferase system, EIIC 
BkAM31D_02600	PF00367	phosphotransferase system, EIIB
BkAM31D_02605	PF00171	Aldehyde dehydrogenase family
BkAM31D_02610	PF00474	Sodium:solute symporter family
BkAM31D_02620	PF02954	Bacterial regulatory protein, Fis family
BkAM31D_02620	PF13426	PAS domain
BkAM31D_02620	PF00158	Sigma-54 interaction domain
BkAM31D_02635	PF02583	Metal-sensitive transcriptional repressor
BkAM31D_02640	PF13686	DsrE/DsrF/DrsH-like family
BkAM31D_02655	PF00581	Rhodanese-like domain
BkAM31D_02655	PF01206	Sulfurtransferase TusA
BkAM31D_02660	PF00753	Metallo-beta-lactamase superfamily
BkAM31D_02660	PF00581	Rhodanese-like domain
BkAM31D_02665	PF01206	Sulfurtransferase TusA
BkAM31D_02670	PF01925	Sulfite exporter TauE/SafE
BkAM31D_02675	PF01207	Dihydrouridine synthase (Dus)
BkAM31D_02680	PF02080	TrkA-C domain
BkAM31D_02680	PF03600	Citrate transporter
BkAM31D_02685	PF00483	Nucleotidyl transferase
BkAM31D_02710	PF00141	Peroxidase
BkAM31D_02730	PF02696	Uncharacterized ACR, YdiU/UPF0061 family
BkAM31D_02735	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
BkAM31D_02735	PF00749	tRNA synthetases class I (E and Q), catalytic domain
BkAM31D_02740	PF03744	6-carboxyhexanoate--CoA ligase
BkAM31D_02745	PF00202	Aminotransferase class-III
BkAM31D_02750	PF00155	Aminotransferase class I and II
BkAM31D_02760	PF00067	Cytochrome P450
BkAM31D_02770	PF00487	Fatty acid desaturase
BkAM31D_02775	PF07730	Histidine kinase
BkAM31D_02780	PF00196	Bacterial regulatory proteins, luxR family
BkAM31D_02780	PF00072	Response regulator receiver domain
BkAM31D_02785	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BkAM31D_02785	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BkAM31D_02785	PF00205	Thiamine pyrophosphate enzyme, central domain
BkAM31D_02790	PF03466	LysR substrate binding domain
BkAM31D_02790	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BkAM31D_02795	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
BkAM31D_02795	PF13378	Enolase C-terminal domain-like
BkAM31D_02800	PF03401	Tripartite tricarboxylate transporter family receptor
BkAM31D_02810	PF01970	Tripartite tricarboxylate transporter TctA family
BkAM31D_02815	PF00072	Response regulator receiver domain
BkAM31D_02820	PF00989	PAS fold
BkAM31D_02820	PF17203	Single cache domain 3
BkAM31D_02820	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
BkAM31D_02820	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_02825	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BkAM31D_02825	PF00056	lactate/malate dehydrogenase, NAD binding domain
BkAM31D_02830	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
BkAM31D_02830	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
BkAM31D_02855	PF13193	AMP-binding enzyme C-terminal domain
BkAM31D_02855	PF00501	AMP-binding enzyme
BkAM31D_02870	PF13556	PucR C-terminal helix-turn-helix domain
BkAM31D_02870	PF17853	GGDEF-like domain
BkAM31D_02870	PF05651	Putative sugar diacid recognition
BkAM31D_02880	PF03594	Benzoate membrane transport protein
BkAM31D_02885	PF00753	Metallo-beta-lactamase superfamily
BkAM31D_02895	PF02653	Branched-chain amino acid transport system / permease component
BkAM31D_02900	PF02653	Branched-chain amino acid transport system / permease component
BkAM31D_02900	PF11862	Domain of unknown function (DUF3382)
BkAM31D_02905	PF00005	ABC transporter
BkAM31D_02905	PF12399	Branched-chain amino acid ATP-binding cassette transporter
BkAM31D_02910	PF00005	ABC transporter
BkAM31D_02925	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BkAM31D_02930	PF00378	Enoyl-CoA hydratase/isomerase
BkAM31D_02950	PF01144	Coenzyme A transferase
BkAM31D_02965	PF00378	Enoyl-CoA hydratase/isomerase
BkAM31D_02970	PF03060	Nitronate monooxygenase
BkAM31D_02975	PF00378	Enoyl-CoA hydratase/isomerase
BkAM31D_02980	PF00753	Metallo-beta-lactamase superfamily
BkAM31D_03010	PF18321	3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain
BkAM31D_03010	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
BkAM31D_03010	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
BkAM31D_03015	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
BkAM31D_03015	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
BkAM31D_03020	PF00108	Thiolase, N-terminal domain
BkAM31D_03020	PF02803	Thiolase, C-terminal domain
BkAM31D_03030	PF00378	Enoyl-CoA hydratase/isomerase
BkAM31D_03035	PF00501	AMP-binding enzyme
BkAM31D_03035	PF13193	AMP-binding enzyme C-terminal domain
BkAM31D_03040	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
BkAM31D_03040	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
BkAM31D_03045	PF01416	tRNA pseudouridine synthase
BkAM31D_03050	PF00440	Bacterial regulatory proteins, tetR family
BkAM31D_03055	PF07690	Major Facilitator Superfamily
BkAM31D_03060	PF12389	Camelysin metallo-endopeptidase
BkAM31D_03080	PF00990	Diguanylate cyclase, GGDEF domain
BkAM31D_03080	PF07694	5TMR of 5TMR-LYT
BkAM31D_03085	PF01654	Cytochrome bd terminal oxidase subunit I
BkAM31D_03090	PF02322	Cytochrome bd terminal oxidase subunit II
BkAM31D_03100	PF00664	ABC transporter transmembrane region
BkAM31D_03100	PF00005	ABC transporter
BkAM31D_03105	PF00005	ABC transporter
BkAM31D_03105	PF00664	ABC transporter transmembrane region
BkAM31D_03115	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
BkAM31D_03115	PF06827	Zinc finger found in FPG and IleRS
BkAM31D_03115	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
BkAM31D_03120	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BkAM31D_03125	PF00990	Diguanylate cyclase, GGDEF domain
BkAM31D_03125	PF03707	Bacterial signalling protein N terminal repeat
BkAM31D_03125	PF00563	EAL domain
BkAM31D_03135	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
BkAM31D_03135	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BkAM31D_03140	PF01799	[2Fe-2S] binding domain
BkAM31D_03140	PF00111	2Fe-2S iron-sulfur cluster binding domain
BkAM31D_03145	PF13478	XdhC Rossmann domain
BkAM31D_03145	PF02625	XdhC and CoxI family
BkAM31D_03155	PF13556	PucR C-terminal helix-turn-helix domain
BkAM31D_03155	PF17853	GGDEF-like domain
BkAM31D_03155	PF07905	Purine catabolism regulatory protein-like family
BkAM31D_03160	PF09349	OHCU decarboxylase
BkAM31D_03160	PF01014	Uricase
BkAM31D_03165	PF00576	HIUase/Transthyretin family
BkAM31D_03170	PF09084	NMT1/THI5 like
BkAM31D_03175	PF07687	Peptidase dimerisation domain
BkAM31D_03175	PF01546	Peptidase family M20/M25/M40
BkAM31D_03180	PF00266	Aminotransferase class-V
BkAM31D_03205	PF00005	ABC transporter
BkAM31D_03210	PF02653	Branched-chain amino acid transport system / permease component
BkAM31D_03215	PF00005	ABC transporter
BkAM31D_03215	PF00664	ABC transporter transmembrane region
BkAM31D_03220	PF00664	ABC transporter transmembrane region
BkAM31D_03220	PF00005	ABC transporter
BkAM31D_03235	PF02417	Chromate transporter
BkAM31D_03240	PF02417	Chromate transporter
BkAM31D_03245	PF01476	LysM domain
BkAM31D_03245	PF00246	Zinc carboxypeptidase
BkAM31D_03250	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_03250	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_03255	PF01943	Polysaccharide biosynthesis protein
BkAM31D_03260	PF02378	Phosphotransferase system, EIIC 
BkAM31D_03260	PF00367	phosphotransferase system, EIIB
BkAM31D_03265	PF00128	Alpha amylase, catalytic domain
BkAM31D_03265	PF16657	Maltogenic Amylase, C-terminal domain
BkAM31D_03270	PF00128	Alpha amylase, catalytic domain
BkAM31D_03270	PF16657	Maltogenic Amylase, C-terminal domain
BkAM31D_03275	PF00128	Alpha amylase, catalytic domain
BkAM31D_03275	PF16657	Maltogenic Amylase, C-terminal domain
BkAM31D_03280	PF00392	Bacterial regulatory proteins, gntR family
BkAM31D_03280	PF07702	UTRA domain
BkAM31D_03285	PF00255	Glutathione peroxidase
BkAM31D_03290	PF02898	Nitric oxide synthase, oxygenase domain
BkAM31D_03295	PF16326	ABC transporter C-terminal domain
BkAM31D_03295	PF12848	ABC transporter
BkAM31D_03295	PF00005	ABC transporter
BkAM31D_03300	PF08220	DeoR-like helix-turn-helix domain
BkAM31D_03300	PF00455	DeoR C terminal sensor domain
BkAM31D_03305	PF00294	pfkB family carbohydrate kinase
BkAM31D_03310	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BkAM31D_03310	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BkAM31D_03320	PF01425	Amidase
BkAM31D_03335	PF09515	Thiamine transporter protein (Thia_YuaJ)
BkAM31D_03345	PF00795	Carbon-nitrogen hydrolase
BkAM31D_03355	PF00367	phosphotransferase system, EIIB
BkAM31D_03355	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BkAM31D_03355	PF02378	Phosphotransferase system, EIIC 
BkAM31D_03360	PF03123	CAT RNA binding domain
BkAM31D_03360	PF00874	PRD domain
BkAM31D_03390	PF01693	Caulimovirus viroplasmin
BkAM31D_03405	PF13404	AsnC-type helix-turn-helix domain
BkAM31D_03405	PF01037	Lrp/AsnC ligand binding domain
BkAM31D_03410	PF08439	Oligopeptidase F
BkAM31D_03410	PF01432	Peptidase family M3
BkAM31D_03415	PF01709	Transcriptional regulator
BkAM31D_03420	PF02322	Cytochrome bd terminal oxidase subunit II
BkAM31D_03425	PF01654	Cytochrome bd terminal oxidase subunit I
BkAM31D_03440	PF00753	Metallo-beta-lactamase superfamily
BkAM31D_03450	PF07690	Major Facilitator Superfamily
BkAM31D_03460	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BkAM31D_03470	PF14748	Pyrroline-5-carboxylate reductase dimerisation
BkAM31D_03470	PF03807	NADP oxidoreductase coenzyme F420-dependent
BkAM31D_03475	PF14167	YfkD-like protein
BkAM31D_03480	PF08756	YfkB-like domain
BkAM31D_03480	PF04055	Radical SAM superfamily
BkAM31D_03490	PF00300	Histidine phosphatase superfamily (branch 1)
BkAM31D_03495	PF05681	Fumarate hydratase (Fumerase)
BkAM31D_03495	PF05683	Fumarase C-terminus
BkAM31D_03500	PF01522	Polysaccharide deacetylase
BkAM31D_03510	PF05958	tRNA (Uracil-5-)-methyltransferase
BkAM31D_03510	PF01938	TRAM domain
BkAM31D_03525	PF00248	Aldo/keto reductase family
BkAM31D_03535	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BkAM31D_03535	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BkAM31D_03540	PF01152	Bacterial-like globin
BkAM31D_03545	PF06339	Ectoine synthase
BkAM31D_03550	PF00202	Aminotransferase class-III
BkAM31D_03555	PF00583	Acetyltransferase (GNAT) family
BkAM31D_03570	PF08338	Domain of unknown function (DUF1731)
BkAM31D_03570	PF01370	NAD dependent epimerase/dehydratase family
BkAM31D_03575	PF02631	RecX family
BkAM31D_03580	PF02652	L-lactate permease
BkAM31D_03585	PF08838	Protein of unknown function (DUF1811)
BkAM31D_03595	PF08176	Small acid-soluble spore protein K family
BkAM31D_03605	PF04307	LexA-binding, inner membrane-associated putative hydrolase
BkAM31D_03615	PF14815	NUDIX domain
BkAM31D_03615	PF00730	HhH-GPD superfamily base excision DNA repair protein
BkAM31D_03630	PF08240	Alcohol dehydrogenase GroES-like domain
BkAM31D_03630	PF02801	Beta-ketoacyl synthase, C-terminal domain
BkAM31D_03630	PF00107	Zinc-binding dehydrogenase
BkAM31D_03630	PF00550	Phosphopantetheine attachment site
BkAM31D_03630	PF00698	Acyl transferase domain
BkAM31D_03630	PF14765	Polyketide synthase dehydratase
BkAM31D_03630	PF16197	Ketoacyl-synthetase C-terminal extension
BkAM31D_03630	PF08659	KR domain
BkAM31D_03630	PF00109	Beta-ketoacyl synthase, N-terminal domain
BkAM31D_03645	PF04167	Protein of unknown function (DUF402)
BkAM31D_03650	PF00005	ABC transporter
BkAM31D_03650	PF00664	ABC transporter transmembrane region
BkAM31D_03655	PF06081	Aromatic acid exporter family member 1
BkAM31D_03660	PF00202	Aminotransferase class-III
BkAM31D_03665	PF07885	Ion channel
BkAM31D_03670	PF00578	AhpC/TSA family
BkAM31D_03675	PF06153	Cyclic-di-AMP receptor
BkAM31D_03680	PF01475	Ferric uptake regulator family
BkAM31D_03685	PF11023	Zinc-ribbon containing domain
BkAM31D_03690	PF18576	Helix-turn-helix domain
BkAM31D_03690	PF14540	Nucleotidyltransferase-like
BkAM31D_03795	PF00589	Phage integrase family
BkAM31D_03795	PF02899	Phage integrase, N-terminal SAM-like domain
BkAM31D_03825	PF04860	Phage portal protein
BkAM31D_03890	PF03050	Transposase IS66 family 
BkAM31D_03890	PF13007	Transposase C of IS166 homeodomain
BkAM31D_03890	PF13005	zinc-finger binding domain of transposase IS66 
BkAM31D_03890	PF13817	IS66 C-terminal element
BkAM31D_03905	PF13276	HTH-like domain
BkAM31D_03905	PF00665	Integrase core domain
BkAM31D_03905	PF13333	Integrase core domain
BkAM31D_03910	PF09339	IclR helix-turn-helix domain
BkAM31D_03910	PF01614	Bacterial transcriptional regulator
BkAM31D_03915	PF01557	Fumarylacetoacetate (FAA) hydrolase family
BkAM31D_03935	PF01494	FAD binding domain
BkAM31D_03940	PF00392	Bacterial regulatory proteins, gntR family
BkAM31D_03940	PF07702	UTRA domain
BkAM31D_03945	PF01773	Na+ dependent nucleoside transporter N-terminus
BkAM31D_03945	PF07662	Na+ dependent nucleoside transporter C-terminus
BkAM31D_03950	PF02885	Glycosyl transferase family, helical bundle domain
BkAM31D_03950	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
BkAM31D_03950	PF00591	Glycosyl transferase family, a/b domain
BkAM31D_03960	PF01676	Metalloenzyme superfamily
BkAM31D_03965	PF01048	Phosphorylase superfamily
BkAM31D_03970	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BkAM31D_03975	PF01791	DeoC/LacD family aldolase
BkAM31D_03985	PF04203	Sortase domain
BkAM31D_03990	PF12804	MobA-like NTP transferase domain
BkAM31D_03995	PF00994	Probable molybdopterin binding domain
BkAM31D_04000	PF06463	Molybdenum Cofactor Synthesis C
BkAM31D_04000	PF04055	Radical SAM superfamily
BkAM31D_04005	PF03454	MoeA C-terminal region (domain IV)
BkAM31D_04005	PF03453	MoeA N-terminal region (domain I and II)
BkAM31D_04005	PF00994	Probable molybdopterin binding domain
BkAM31D_04010	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
BkAM31D_04015	PF02391	MoaE protein
BkAM31D_04020	PF02597	ThiS family
BkAM31D_04030	PF02634	FdhD/NarQ family
BkAM31D_04035	PF07690	Major Facilitator Superfamily
BkAM31D_04040	PF10057	Uncharacterized conserved protein (DUF2294)
BkAM31D_04045	PF01568	Molydopterin dinucleotide binding domain
BkAM31D_04045	PF00384	Molybdopterin oxidoreductase
BkAM31D_04050	PF04309	Glycerol-3-phosphate responsive antiterminator
BkAM31D_04055	PF00230	Major intrinsic protein
BkAM31D_04060	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BkAM31D_04060	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BkAM31D_04075	PF00210	Ferritin-like domain
BkAM31D_04085	PF00210	Ferritin-like domain
BkAM31D_04095	PF08331	Domain of unknown function (DUF1730)
BkAM31D_04100	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
BkAM31D_04100	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
BkAM31D_04105	PF12671	Putative amidase domain
BkAM31D_04110	PF00588	SpoU rRNA Methylase family
BkAM31D_04120	PF17328	Family of unknown function (DUF5366)
BkAM31D_04130	PF00905	Penicillin binding protein transpeptidase domain
BkAM31D_04130	PF00912	Transglycosylase
BkAM31D_04135	PF06798	PrkA serine protein kinase C-terminal domain
BkAM31D_04135	PF08298	PrkA AAA domain
BkAM31D_04140	PF10502	Signal peptidase, peptidase S26 
BkAM31D_04145	PF04285	Protein of unknown function (DUF444)
BkAM31D_04155	PF13188	PAS domain
BkAM31D_04155	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_04155	PF00989	PAS fold
BkAM31D_04155	PF13426	PAS domain
BkAM31D_04155	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_04160	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BkAM31D_04160	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BkAM31D_04165	PF01619	Proline dehydrogenase
BkAM31D_04170	PF00491	Arginase family
BkAM31D_04180	PF01047	MarR family
BkAM31D_04185	PF01032	FecCD transport family
BkAM31D_04190	PF01032	FecCD transport family
BkAM31D_04195	PF00005	ABC transporter
BkAM31D_04200	PF01497	Periplasmic binding protein
BkAM31D_04205	PF00881	Nitroreductase family
BkAM31D_04210	PF00155	Aminotransferase class I and II
BkAM31D_04215	PF05067	Manganese containing catalase
BkAM31D_04220	PF03009	Glycerophosphoryl diester phosphodiesterase family
BkAM31D_04230	PF00343	Carbohydrate phosphorylase
BkAM31D_04235	PF00534	Glycosyl transferases group 1
BkAM31D_04235	PF08323	Starch synthase catalytic domain
BkAM31D_04240	PF00483	Nucleotidyl transferase
BkAM31D_04245	PF00483	Nucleotidyl transferase
BkAM31D_04255	PF00795	Carbon-nitrogen hydrolase
BkAM31D_04255	PF00583	Acetyltransferase (GNAT) family
BkAM31D_04265	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
BkAM31D_04265	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
BkAM31D_04265	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
BkAM31D_04265	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
BkAM31D_04270	PF04293	SpoVR like protein
BkAM31D_04275	PF00072	Response regulator receiver domain
BkAM31D_04275	PF00486	Transcriptional regulatory protein, C terminal
BkAM31D_04280	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_04280	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_04280	PF00672	HAMP domain
BkAM31D_04285	PF03413	Peptidase propeptide and YPEB domain
BkAM31D_04290	PF00155	Aminotransferase class I and II
BkAM31D_04295	PF00209	Sodium:neurotransmitter symporter family
BkAM31D_04300	PF01435	Peptidase family M48
BkAM31D_04305	PF04011	LemA family
BkAM31D_04310	PF01979	Amidohydrolase family
BkAM31D_04315	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BkAM31D_04315	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BkAM31D_04315	PF02770	Acyl-CoA dehydrogenase, middle domain
BkAM31D_04320	PF00289	Biotin carboxylase, N-terminal domain
BkAM31D_04320	PF02785	Biotin carboxylase C-terminal domain
BkAM31D_04320	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BkAM31D_04325	PF00364	Biotin-requiring enzyme
BkAM31D_04330	PF00682	HMGL-like
BkAM31D_04335	PF00378	Enoyl-CoA hydratase/isomerase
BkAM31D_04340	PF01039	Carboxyl transferase domain
BkAM31D_04345	PF01039	Carboxyl transferase domain
BkAM31D_04350	PF16177	Acetyl-coenzyme A synthetase N-terminus
BkAM31D_04350	PF00501	AMP-binding enzyme
BkAM31D_04350	PF13193	AMP-binding enzyme C-terminal domain
BkAM31D_04355	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BkAM31D_04370	PF17277	Family of unknown function (DUF5342)
BkAM31D_04400	PF00884	Sulfatase
BkAM31D_04420	PF00072	Response regulator receiver domain
BkAM31D_04420	PF00486	Transcriptional regulatory protein, C terminal
BkAM31D_04425	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_04425	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_04425	PF00672	HAMP domain
BkAM31D_04430	PF01336	OB-fold nucleic acid binding domain
BkAM31D_04430	PF01966	HD domain
BkAM31D_04460	PF01047	MarR family
BkAM31D_04480	PF00266	Aminotransferase class-V
BkAM31D_04485	PF01230	HIT domain
BkAM31D_04490	PF00005	ABC transporter
BkAM31D_04495	PF05975	Bacterial ABC transporter protein EcsB
BkAM31D_04500	PF12787	EcsC protein family
BkAM31D_04505	PF02683	Cytochrome C biogenesis protein transmembrane region
BkAM31D_04515	PF04012	PspA/IM30 family
BkAM31D_04525	PF09922	Cell wall-active antibiotics response 4TMS YvqF
BkAM31D_04530	PF00672	HAMP domain
BkAM31D_04530	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_04530	PF07730	Histidine kinase
BkAM31D_04535	PF00072	Response regulator receiver domain
BkAM31D_04535	PF00196	Bacterial regulatory proteins, luxR family
BkAM31D_04540	PF03992	Antibiotic biosynthesis monooxygenase
BkAM31D_04545	PF00905	Penicillin binding protein transpeptidase domain
BkAM31D_04545	PF00912	Transglycosylase
BkAM31D_04550	PF01208	Uroporphyrinogen decarboxylase (URO-D)
BkAM31D_04580	PF00497	Bacterial extracellular solute-binding proteins, family 3
BkAM31D_04585	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_04590	PF00005	ABC transporter
BkAM31D_04595	PF14682	Sporulation initiation phospho-transferase B, C-terminal
BkAM31D_04595	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
BkAM31D_04600	PF09269	Domain of unknown function (DUF1967)
BkAM31D_04600	PF01926	50S ribosome-binding GTPase
BkAM31D_04600	PF01018	GTP1/OBG
BkAM31D_04605	PF01842	ACT domain
BkAM31D_04610	PF01842	ACT domain
BkAM31D_04610	PF00800	Prephenate dehydratase
BkAM31D_04615	PF08279	HTH domain
BkAM31D_04615	PF02829	3H domain
BkAM31D_04620	PF00266	Aminotransferase class-V
BkAM31D_04625	PF00890	FAD binding domain
BkAM31D_04625	PF02910	Fumarate reductase flavoprotein C-term
BkAM31D_04630	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
BkAM31D_04630	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
BkAM31D_04635	PF02445	Quinolinate synthetase A protein
BkAM31D_04640	PF01476	LysM domain
BkAM31D_04650	PF08977	Bypass of Forespore C, N terminal
BkAM31D_04650	PF08955	BofC C-terminal domain
BkAM31D_04655	PF07499	RuvA, C-terminal domain
BkAM31D_04655	PF01330	RuvA N terminal domain
BkAM31D_04660	PF05496	Holliday junction DNA helicase RuvB P-loop domain
BkAM31D_04660	PF05491	RuvB C-terminal winged helix domain
BkAM31D_04660	PF17864	RuvB AAA lid domain
BkAM31D_04665	PF11146	Protein of unknown function (DUF2905)
BkAM31D_04670	PF02547	Queuosine biosynthesis protein
BkAM31D_04675	PF01702	Queuine tRNA-ribosyltransferase
BkAM31D_04685	PF02699	Preprotein translocase subunit
BkAM31D_04690	PF12670	Protein of unknown function (DUF3792)
BkAM31D_04695	PF03600	Citrate transporter
BkAM31D_04700	PF04239	Protein of unknown function (DUF421)
BkAM31D_04705	PF14667	Polysaccharide biosynthesis C-terminal domain
BkAM31D_04705	PF01943	Polysaccharide biosynthesis protein
BkAM31D_04730	PF02355	Protein export membrane protein
BkAM31D_04730	PF07549	SecD/SecF GG Motif
BkAM31D_04735	PF16916	Dimerisation domain of Zinc Transporter
BkAM31D_04735	PF01545	Cation efflux family
BkAM31D_04740	PF06305	Lipopolysaccharide assembly protein A domain
BkAM31D_04745	PF02272	DHHA1 domain
BkAM31D_04745	PF17768	RecJ OB domain
BkAM31D_04745	PF01368	DHH family
BkAM31D_04745	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
BkAM31D_04750	PF00156	Phosphoribosyl transferase domain
BkAM31D_04755	PF04607	Region found in RelA / SpoT proteins
BkAM31D_04755	PF13291	ACT domain
BkAM31D_04755	PF02824	TGS domain
BkAM31D_04760	PF02580	D-Tyr-tRNA(Tyr) deacylase
BkAM31D_04775	PF13393	Histidyl-tRNA synthetase
BkAM31D_04775	PF03129	Anticodon binding domain
BkAM31D_04780	PF02938	GAD domain
BkAM31D_04780	PF00152	tRNA synthetases class II (D, K and N) 
BkAM31D_04780	PF01336	OB-fold nucleic acid binding domain
BkAM31D_04790	PF03447	Homoserine dehydrogenase, NAD binding domain
BkAM31D_04790	PF00742	Homoserine dehydrogenase
BkAM31D_04805	PF00899	ThiF family
BkAM31D_04810	PF02652	L-lactate permease
BkAM31D_04815	PF02754	Cysteine-rich domain
BkAM31D_04820	PF13183	4Fe-4S dicluster domain
BkAM31D_04820	PF11870	Domain of unknown function (DUF3390)
BkAM31D_04820	PF02589	LUD domain
BkAM31D_04825	PF02589	LUD domain
BkAM31D_04850	PF02082	Transcriptional regulator
BkAM31D_04855	PF00266	Aminotransferase class-V
BkAM31D_04875	PF13538	UvrD-like helicase C-terminal domain
BkAM31D_04875	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
BkAM31D_04875	PF14490	Helix-hairpin-helix containing domain
BkAM31D_04890	PF01594	AI-2E family transporter
BkAM31D_04900	PF02272	DHHA1 domain
BkAM31D_04900	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BkAM31D_04900	PF01411	tRNA synthetases class II (A)
BkAM31D_04905	PF06135	IreB regulatory phosphoprotein
BkAM31D_04910	PF03652	Holliday junction resolvase
BkAM31D_04915	PF06949	Protein of unknown function (DUF1292)
BkAM31D_04920	PF02618	YceG-like family
BkAM31D_04940	PF00485	Phosphoribulokinase / Uridine kinase family
BkAM31D_04945	PF01272	Transcription elongation factor, GreA/GreB, C-term
BkAM31D_04945	PF03449	Transcription elongation factor, N-terminal
BkAM31D_04955	PF01979	Amidohydrolase family
BkAM31D_04960	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
BkAM31D_04960	PF05221	S-adenosyl-L-homocysteine hydrolase
BkAM31D_04970	PF00293	NUDIX domain
BkAM31D_04975	PF07687	Peptidase dimerisation domain
BkAM31D_04975	PF01546	Peptidase family M20/M25/M40
BkAM31D_04990	PF04542	Sigma-70 region 2 
BkAM31D_04990	PF04545	Sigma-70, region 4
BkAM31D_04995	PF03448	MgtE intracellular N domain
BkAM31D_04995	PF01769	Divalent cation transporter
BkAM31D_04995	PF00571	CBS domain
BkAM31D_05000	PF02308	MgtC family
BkAM31D_05005	PF00571	CBS domain
BkAM31D_05005	PF03448	MgtE intracellular N domain
BkAM31D_05005	PF01769	Divalent cation transporter
BkAM31D_05025	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
BkAM31D_05030	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
BkAM31D_05045	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_05045	PF08447	PAS fold
BkAM31D_05045	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_05045	PF00989	PAS fold
BkAM31D_05055	PF02554	Carbon starvation protein CstA
BkAM31D_05065	PF00216	Bacterial DNA-binding protein
BkAM31D_05075	PF02666	Phosphatidylserine decarboxylase
BkAM31D_05080	PF17853	GGDEF-like domain
BkAM31D_05080	PF13556	PucR C-terminal helix-turn-helix domain
BkAM31D_05080	PF05651	Putative sugar diacid recognition
BkAM31D_05095	PF02754	Cysteine-rich domain
BkAM31D_05095	PF13183	4Fe-4S dicluster domain
BkAM31D_05140	PF08970	Sporulation inhibitor A
BkAM31D_05145	PF01926	50S ribosome-binding GTPase
BkAM31D_05150	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
BkAM31D_05150	PF01488	Shikimate / quinate 5-dehydrogenase
BkAM31D_05150	PF08501	Shikimate dehydrogenase substrate binding domain
BkAM31D_05155	PF01985	CRS1 / YhbY (CRM) domain
BkAM31D_05160	PF01467	Cytidylyltransferase-like
BkAM31D_05165	PF01966	HD domain
BkAM31D_05180	PF13649	Methyltransferase domain
BkAM31D_05185	PF14748	Pyrroline-5-carboxylate reductase dimerisation
BkAM31D_05185	PF03807	NADP oxidoreductase coenzyme F420-dependent
BkAM31D_05190	PF10752	Protein of unknown function (DUF2533) 
BkAM31D_05195	PF10531	SLBB domain
BkAM31D_05200	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BkAM31D_05215	PF14141	YqzM-like protein
BkAM31D_05220	PF06144	DNA polymerase III, delta subunit
BkAM31D_05225	PF01649	Ribosomal protein S20
BkAM31D_05230	PF03418	Germination protease
BkAM31D_05235	PF07454	Stage II sporulation protein P (SpoIIP)
BkAM31D_05250	PF03144	Elongation factor Tu domain 2
BkAM31D_05250	PF00679	Elongation factor G C-terminus
BkAM31D_05250	PF14492	Elongation Factor G, domain II
BkAM31D_05250	PF00009	Elongation factor Tu GTP binding domain
BkAM31D_05250	PF06421	GTP-binding protein LepA C-terminus
BkAM31D_05255	PF04055	Radical SAM superfamily
BkAM31D_05255	PF06969	HemN C-terminal domain
BkAM31D_05260	PF01628	HrcA protein C terminal domain
BkAM31D_05260	PF03444	Winged helix-turn-helix transcription repressor, HrcA DNA-binding
BkAM31D_05265	PF01025	GrpE
BkAM31D_05270	PF00012	Hsp70 protein
BkAM31D_05275	PF00226	DnaJ domain
BkAM31D_05275	PF00684	DnaJ central domain
BkAM31D_05275	PF01556	DnaJ C terminal domain
BkAM31D_05285	PF04452	RNA methyltransferase
BkAM31D_05290	PF04055	Radical SAM superfamily
BkAM31D_05290	PF01938	TRAM domain
BkAM31D_05290	PF00919	Uncharacterized protein family UPF0004
BkAM31D_05295	PF01791	DeoC/LacD family aldolase
BkAM31D_05300	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_05300	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_05315	PF02690	Na+/Pi-cotransporter
BkAM31D_05320	PF17932	Tetracyclin repressor-like, C-terminal domain
BkAM31D_05320	PF00440	Bacterial regulatory proteins, tetR family
BkAM31D_05325	PF01165	Ribosomal protein S21
BkAM31D_05330	PF09424	Yqey-like protein
BkAM31D_05345	PF12127	SigmaW regulon antibacterial
BkAM31D_05355	PF07873	YabP family
BkAM31D_05360	PF06898	Putative stage IV sporulation protein YqfD
BkAM31D_05365	PF02562	PhoH-like protein
BkAM31D_05370	PF07697	7TM-HD extracellular
BkAM31D_05370	PF01966	HD domain
BkAM31D_05370	PF07698	7TM receptor with intracellular HD hydrolase
BkAM31D_05375	PF02130	Uncharacterized protein family UPF0054
BkAM31D_05380	PF01219	Prokaryotic diacylglycerol kinase
BkAM31D_05390	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BkAM31D_05395	PF07650	KH domain
BkAM31D_05395	PF01926	50S ribosome-binding GTPase
BkAM31D_05400	PF14006	YqzL-like protein
BkAM31D_05405	PF11967	Recombination protein O N terminal
BkAM31D_05405	PF02565	Recombination protein O C terminal
BkAM31D_05415	PF02091	Glycyl-tRNA synthetase alpha subunit
BkAM31D_05420	PF02092	Glycyl-tRNA synthetase beta subunit
BkAM31D_05420	PF05746	DALR anticodon binding domain
BkAM31D_05425	PF08279	HTH domain
BkAM31D_05425	PF00571	CBS domain
BkAM31D_05430	PF03618	Kinase/pyrophosphorylase
BkAM31D_05435	PF02639	Uncharacterized BCR, YaiI/YqxD family COG1671
BkAM31D_05440	PF10410	DnaB-helicase binding domain of primase
BkAM31D_05440	PF01807	CHC2 zinc finger
BkAM31D_05440	PF08275	DNA primase catalytic core, N-terminal domain
BkAM31D_05445	PF03979	Sigma-70 factor, region 1.1
BkAM31D_05445	PF04545	Sigma-70, region 4
BkAM31D_05445	PF04539	Sigma-70 region 3
BkAM31D_05445	PF04542	Sigma-70 region 2 
BkAM31D_05445	PF00140	Sigma-70 factor, region 1.2
BkAM31D_05455	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
BkAM31D_05460	PF04816	tRNA (adenine(22)-N(1))-methyltransferase
BkAM31D_05465	PF01784	NIF3 (NGG1p interacting factor 3)
BkAM31D_05470	PF02401	LytB protein
BkAM31D_05490	PF00270	DEAD/DEAH box helicase
BkAM31D_05490	PF00271	Helicase conserved C-terminal domain
BkAM31D_05495	PF01261	Xylose isomerase-like TIM barrel
BkAM31D_05505	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_05505	PF13426	PAS domain
BkAM31D_05505	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_05505	PF00989	PAS fold
BkAM31D_05505	PF13188	PAS domain
BkAM31D_05525	PF13089	Polyphosphate kinase N-terminal domain
BkAM31D_05525	PF13090	Polyphosphate kinase C-terminal domain 2
BkAM31D_05525	PF02503	Polyphosphate kinase middle domain
BkAM31D_05525	PF17941	Polyphosphate kinase C-terminal domain 1
BkAM31D_05530	PF02541	Ppx/GppA phosphatase family
BkAM31D_05535	PF00005	ABC transporter
BkAM31D_05540	PF00950	ABC 3 transport family
BkAM31D_05545	PF00950	ABC 3 transport family
BkAM31D_05550	PF01475	Ferric uptake regulator family
BkAM31D_05575	PF04551	GcpE protein
BkAM31D_05585	PF07690	Major Facilitator Superfamily
BkAM31D_05590	PF06207	Protein of unknown function (DUF1002)
BkAM31D_05605	PF02690	Na+/Pi-cotransporter
BkAM31D_05635	PF02673	Bacitracin resistance protein BacA
BkAM31D_05640	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
BkAM31D_05640	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
BkAM31D_05645	PF07690	Major Facilitator Superfamily
BkAM31D_05675	PF09210	Domain of unknown function (DUF1957)
BkAM31D_05675	PF03065	Glycosyl hydrolase family 57
BkAM31D_05680	PF00483	Nucleotidyl transferase
BkAM31D_05690	PF00471	Ribosomal protein L33
BkAM31D_05695	PF01812	5-formyltetrahydrofolate cyclo-ligase family
BkAM31D_05705	PF00899	ThiF family
BkAM31D_05710	PF00056	lactate/malate dehydrogenase, NAD binding domain
BkAM31D_05710	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BkAM31D_05720	PF01694	Rhomboid family
BkAM31D_05730	PF03323	Bacillus/Clostridium GerA spore germination protein
BkAM31D_05750	PF00480	ROK family
BkAM31D_05755	PF10415	Fumarase C C-terminus
BkAM31D_05755	PF00206	Lyase
BkAM31D_05770	PF02581	Thiamine monophosphate synthase
BkAM31D_05780	PF05690	Thiazole biosynthesis protein ThiG
BkAM31D_05785	PF01266	FAD dependent oxidoreductase
BkAM31D_05790	PF08543	Phosphomethylpyrimidine kinase
BkAM31D_05800	PF01910	Thiamine-binding protein
BkAM31D_05805	PF13673	Acetyltransferase (GNAT) domain
BkAM31D_05815	PF00756	Putative esterase
BkAM31D_05825	PF01641	SelR domain
BkAM31D_05830	PF01625	Peptide methionine sulfoxide reductase
BkAM31D_05860	PF07552	Spore Coat Protein X and V domain
BkAM31D_05870	PF05067	Manganese containing catalase
BkAM31D_05875	PF01925	Sulfite exporter TauE/SafE
BkAM31D_05885	PF00497	Bacterial extracellular solute-binding proteins, family 3
BkAM31D_05890	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_05895	PF00005	ABC transporter
BkAM31D_05900	PF11728	Putative aromatic acid exporter C-terminal domain
BkAM31D_05900	PF06081	Aromatic acid exporter family member 1
BkAM31D_05905	PF03734	L,D-transpeptidase catalytic domain
BkAM31D_05920	PF01546	Peptidase family M20/M25/M40
BkAM31D_05920	PF07687	Peptidase dimerisation domain
BkAM31D_05925	PF11799	impB/mucB/samB family C-terminal domain
BkAM31D_05925	PF00817	impB/mucB/samB family
BkAM31D_05935	PF01312	FlhB HrpN YscU SpaS Family
BkAM31D_05945	PF00669	Bacterial flagellin N-terminal helical region
BkAM31D_05945	PF00700	Bacterial flagellin C-terminal helical region
BkAM31D_05950	PF00700	Bacterial flagellin C-terminal helical region
BkAM31D_05950	PF00669	Bacterial flagellin N-terminal helical region
BkAM31D_05955	PF03885	Protein of unknown function (DUF327)
BkAM31D_05990	PF01507	Phosphoadenosine phosphosulfate reductase family
BkAM31D_05995	PF01747	ATP-sulfurylase
BkAM31D_05995	PF14306	PUA-like domain
BkAM31D_06000	PF01384	Phosphate transporter family
BkAM31D_06010	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
BkAM31D_06010	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
BkAM31D_06020	PF00082	Subtilase family
BkAM31D_06030	PF04748	Divergent polysaccharide deacetylase
BkAM31D_06035	PF13411	MerR HTH family regulatory protein
BkAM31D_06040	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BkAM31D_06045	PF01903	CbiX
BkAM31D_06055	PF02277	Phosphoribosyltransferase
BkAM31D_06060	PF02649	Type I GTP cyclohydrolase folE2
BkAM31D_06070	PF00696	Amino acid kinase family
BkAM31D_06070	PF13840	ACT domain 
BkAM31D_06085	PF03807	NADP oxidoreductase coenzyme F420-dependent
BkAM31D_06085	PF14748	Pyrroline-5-carboxylate reductase dimerisation
BkAM31D_06090	PF00171	Aldehyde dehydrogenase family
BkAM31D_06095	PF00696	Amino acid kinase family
BkAM31D_06095	PF01472	PUA domain
BkAM31D_06105	PF00106	short chain dehydrogenase
BkAM31D_06110	PF00106	short chain dehydrogenase
BkAM31D_06130	PF00733	Asparagine synthase
BkAM31D_06130	PF13537	Glutamine amidotransferase domain
BkAM31D_06150	PF00156	Phosphoribosyl transferase domain
BkAM31D_06165	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BkAM31D_06170	PF00874	PRD domain
BkAM31D_06170	PF03123	CAT RNA binding domain
BkAM31D_06175	PF00294	pfkB family carbohydrate kinase
BkAM31D_06185	PF13722	5TM C-terminal transporter carbon starvation CstA
BkAM31D_06185	PF02554	Carbon starvation protein CstA
BkAM31D_06195	PF03773	Predicted permease
BkAM31D_06205	PF02492	CobW/HypB/UreG, nucleotide-binding domain
BkAM31D_06205	PF07683	Cobalamin synthesis protein cobW C-terminal domain
BkAM31D_06210	PF13460	NAD(P)H-binding 
BkAM31D_06220	PF02673	Bacitracin resistance protein BacA
BkAM31D_06225	PF00578	AhpC/TSA family
BkAM31D_06235	PF13072	Mother cell inhibitor of FtsZ
BkAM31D_06240	PF00293	NUDIX domain
BkAM31D_06250	PF01944	Stage II sporulation protein M
BkAM31D_06255	PF01475	Ferric uptake regulator family
BkAM31D_06260	PF14004	Protein of unknown function (DUF4227)
BkAM31D_06265	PF00589	Phage integrase family
BkAM31D_06265	PF02899	Phage integrase, N-terminal SAM-like domain
BkAM31D_06270	PF01676	Metalloenzyme superfamily
BkAM31D_06275	PF01048	Phosphorylase superfamily
BkAM31D_06280	PF02885	Glycosyl transferase family, helical bundle domain
BkAM31D_06280	PF00591	Glycosyl transferase family, a/b domain
BkAM31D_06280	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
BkAM31D_06290	PF10057	Uncharacterized conserved protein (DUF2294)
BkAM31D_06300	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
BkAM31D_06300	PF02770	Acyl-CoA dehydrogenase, middle domain
BkAM31D_06300	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BkAM31D_06305	PF01476	LysM domain
BkAM31D_06305	PF03734	L,D-transpeptidase catalytic domain
BkAM31D_06310	PF14174	YycC-like protein
BkAM31D_06325	PF00486	Transcriptional regulatory protein, C terminal
BkAM31D_06325	PF00072	Response regulator receiver domain
BkAM31D_06330	PF14827	Double sensory domain of two-component sensor kinase
BkAM31D_06330	PF00672	HAMP domain
BkAM31D_06330	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_06330	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_06330	PF13426	PAS domain
BkAM31D_06335	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BkAM31D_06340	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BkAM31D_06345	PF02566	OsmC-like protein
BkAM31D_06355	PF00175	Oxidoreductase NAD-binding domain 
BkAM31D_06355	PF00970	Oxidoreductase FAD-binding domain
BkAM31D_06355	PF00042	Globin
BkAM31D_06360	PF07943	Penicillin-binding protein 5, C-terminal domain
BkAM31D_06360	PF00768	D-alanyl-D-alanine carboxypeptidase
BkAM31D_06365	PF01740	STAS domain
BkAM31D_06370	PF13581	Histidine kinase-like ATPase domain
BkAM31D_06375	PF04539	Sigma-70 region 3
BkAM31D_06375	PF04545	Sigma-70, region 4
BkAM31D_06375	PF04542	Sigma-70 region 2 
BkAM31D_06380	PF01008	Initiation factor 2 subunit family
BkAM31D_06385	PF01636	Phosphotransferase enzyme family
BkAM31D_06395	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
BkAM31D_06395	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
BkAM31D_06405	PF00596	Class II Aldolase and Adducin N-terminal domain
BkAM31D_06410	PF03079	ARD/ARD' family
BkAM31D_06415	PF13537	Glutamine amidotransferase domain
BkAM31D_06415	PF00733	Asparagine synthase
BkAM31D_06420	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
BkAM31D_06425	PF07451	Stage V sporulation protein AD (SpoVAD)
BkAM31D_06430	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
BkAM31D_06435	PF14097	Stage V sporulation protein AE1
BkAM31D_06440	PF03323	Bacillus/Clostridium GerA spore germination protein
BkAM31D_06445	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
BkAM31D_06445	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
BkAM31D_06465	PF04962	KduI/IolB family
BkAM31D_06470	PF02614	Glucuronate isomerase
BkAM31D_06475	PF01370	NAD dependent epimerase/dehydratase family
BkAM31D_06480	PF13472	GDSL-like Lipase/Acylhydrolase family
BkAM31D_06485	PF00295	Glycosyl hydrolases family 28
BkAM31D_06495	PF12833	Helix-turn-helix domain
BkAM31D_06495	PF17853	GGDEF-like domain
BkAM31D_06505	PF13416	Bacterial extracellular solute-binding protein
BkAM31D_06510	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_06515	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_06525	PF07690	Major Facilitator Superfamily
BkAM31D_06535	PF00295	Glycosyl hydrolases family 28
BkAM31D_06545	PF17851	Beta xylosidase C-terminal Concanavalin A-like domain 
BkAM31D_06545	PF04616	Glycosyl hydrolases family 43
BkAM31D_06550	PF07470	Glycosyl Hydrolase Family 88
BkAM31D_06560	PF04854	Protein of unknown function, DUF624
BkAM31D_06565	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BkAM31D_06565	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BkAM31D_06570	PF00294	pfkB family carbohydrate kinase
BkAM31D_06575	PF00356	Bacterial regulatory proteins, lacI family
BkAM31D_06580	PF01758	Sodium Bile acid symporter family
BkAM31D_06585	PF04295	D-galactarate dehydratase / Altronate hydrolase, C terminus
BkAM31D_06585	PF08666	SAF domain
BkAM31D_06590	PF08125	Mannitol dehydrogenase C-terminal domain
BkAM31D_06590	PF01232	Mannitol dehydrogenase Rossmann domain
BkAM31D_06595	PF01081	KDPG and KHG aldolase
BkAM31D_06600	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
BkAM31D_06605	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BkAM31D_06620	PF09680	Family of unknown function
BkAM31D_06625	PF14069	Stage VI sporulation protein F
BkAM31D_06635	PF07694	5TMR of 5TMR-LYT
BkAM31D_06635	PF13492	GAF domain
BkAM31D_06635	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_06635	PF06580	Histidine kinase
BkAM31D_06640	PF04397	LytTr DNA-binding domain
BkAM31D_06640	PF00072	Response regulator receiver domain
BkAM31D_06645	PF02554	Carbon starvation protein CstA
BkAM31D_06680	PF04542	Sigma-70 region 2 
BkAM31D_06685	PF12791	Anti-sigma factor N-terminus
BkAM31D_06690	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BkAM31D_06690	PF00672	HAMP domain
BkAM31D_06690	PF02743	Cache domain
BkAM31D_06705	PF13460	NAD(P)H-binding 
BkAM31D_06715	PF01323	DSBA-like thioredoxin domain
BkAM31D_06725	PF07690	Major Facilitator Superfamily
BkAM31D_06735	PF06725	3D domain
BkAM31D_06735	PF01476	LysM domain
BkAM31D_06760	PF07070	SpoOM protein
BkAM31D_06770	PF00005	ABC transporter
BkAM31D_06775	PF02653	Branched-chain amino acid transport system / permease component
BkAM31D_06785	PF00501	AMP-binding enzyme
BkAM31D_06785	PF13193	AMP-binding enzyme C-terminal domain
BkAM31D_06790	PF01266	FAD dependent oxidoreductase
BkAM31D_06795	PF01266	FAD dependent oxidoreductase
BkAM31D_06805	PF02525	Flavodoxin-like fold
BkAM31D_06850	PF07690	Major Facilitator Superfamily
BkAM31D_06875	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BkAM31D_06900	PF13419	Haloacid dehalogenase-like hydrolase
BkAM31D_06915	PF00892	EamA-like transporter family
BkAM31D_06920	PF07690	Major Facilitator Superfamily
BkAM31D_06930	PF13302	Acetyltransferase (GNAT) domain
BkAM31D_06955	PF00072	Response regulator receiver domain
BkAM31D_06955	PF00486	Transcriptional regulatory protein, C terminal
BkAM31D_06960	PF02146	Sir2 family
BkAM31D_06970	PF01047	MarR family
BkAM31D_06975	PF07690	Major Facilitator Superfamily
BkAM31D_06990	PF01751	Toprim domain
BkAM31D_07000	PF04073	Aminoacyl-tRNA editing domain
BkAM31D_07005	PF17956	Nicotinate phosphoribosyltransferase C-terminal domain
BkAM31D_07005	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
BkAM31D_07005	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
BkAM31D_07010	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
BkAM31D_07010	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BkAM31D_07015	PF00582	Universal stress protein family
BkAM31D_07040	PF00478	IMP dehydrogenase / GMP reductase domain
BkAM31D_07045	PF02016	LD-carboxypeptidase N-terminal domain
BkAM31D_07045	PF17676	LD-carboxypeptidase C-terminal domain
BkAM31D_07050	PF00392	Bacterial regulatory proteins, gntR family
BkAM31D_07055	PF00005	ABC transporter
BkAM31D_07080	PF00877	NlpC/P60 family
BkAM31D_07115	PF01380	SIS domain
BkAM31D_07120	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
BkAM31D_07125	PF01638	HxlR-like helix-turn-helix
BkAM31D_07130	PF01526	Tn3 transposase DDE domain
BkAM31D_07130	PF13700	Domain of unknown function (DUF4158)
BkAM31D_07135	PF02796	Helix-turn-helix domain of resolvase
BkAM31D_07135	PF00239	Resolvase, N terminal domain
BkAM31D_07145	PF01520	N-acetylmuramoyl-L-alanine amidase
BkAM31D_07145	PF05036	Sporulation related domain
BkAM31D_07150	PF03845	Spore germination protein
BkAM31D_07155	PF03845	Spore germination protein
BkAM31D_07190	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
BkAM31D_07195	PF07451	Stage V sporulation protein AD (SpoVAD)
BkAM31D_07200	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
BkAM31D_07215	PF04239	Protein of unknown function (DUF421)
BkAM31D_07240	PF13700	Domain of unknown function (DUF4158)
BkAM31D_07240	PF01526	Tn3 transposase DDE domain
BkAM31D_07250	PF00011	Hsp20/alpha crystallin family
BkAM31D_07255	PF03323	Bacillus/Clostridium GerA spore germination protein
BkAM31D_07265	PF05504	Spore germination B3/ GerAC like, C-terminal 
BkAM31D_07270	PF07486	Cell Wall Hydrolase
BkAM31D_07275	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
BkAM31D_07275	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
BkAM31D_07280	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
BkAM31D_07280	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BkAM31D_07290	PF00342	Phosphoglucose isomerase
BkAM31D_07300	PF02796	Helix-turn-helix domain of resolvase
BkAM31D_07300	PF00239	Resolvase, N terminal domain
BkAM31D_07320	PF00107	Zinc-binding dehydrogenase
BkAM31D_07320	PF08240	Alcohol dehydrogenase GroES-like domain
BkAM31D_07320	PF13823	Alcohol dehydrogenase GroES-associated
BkAM31D_07330	PF04542	Sigma-70 region 2 
BkAM31D_07330	PF08281	Sigma-70, region 4
BkAM31D_07335	PF02796	Helix-turn-helix domain of resolvase
BkAM31D_07335	PF00239	Resolvase, N terminal domain
BkAM31D_07340	PF01526	Tn3 transposase DDE domain
BkAM31D_07340	PF13700	Domain of unknown function (DUF4158)
BkAM31D_07345	PF07486	Cell Wall Hydrolase
BkAM31D_07355	PF00107	Zinc-binding dehydrogenase
BkAM31D_07355	PF08240	Alcohol dehydrogenase GroES-like domain
BkAM31D_07355	PF13823	Alcohol dehydrogenase GroES-associated
BkAM31D_07360	PF07875	Coat F domain
BkAM31D_07375	PF07875	Coat F domain
BkAM31D_07410	PF00239	Resolvase, N terminal domain
BkAM31D_07410	PF02796	Helix-turn-helix domain of resolvase
BkAM31D_07415	PF01695	IstB-like ATP binding protein
BkAM31D_07420	PF00665	Integrase core domain
BkAM31D_07430	PF00692	dUTPase
BkAM31D_07470	PF13089	Polyphosphate kinase N-terminal domain
BkAM31D_07470	PF17941	Polyphosphate kinase C-terminal domain 1
BkAM31D_07470	PF13090	Polyphosphate kinase C-terminal domain 2
BkAM31D_07470	PF02503	Polyphosphate kinase middle domain
BkAM31D_07475	PF03707	Bacterial signalling protein N terminal repeat
BkAM31D_07475	PF00990	Diguanylate cyclase, GGDEF domain
BkAM31D_07475	PF00563	EAL domain
BkAM31D_07480	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BkAM31D_07490	PF00296	Luciferase-like monooxygenase
BkAM31D_07525	PF17932	Tetracyclin repressor-like, C-terminal domain
BkAM31D_07525	PF00440	Bacterial regulatory proteins, tetR family
BkAM31D_07535	PF00676	Dehydrogenase E1 component
BkAM31D_07540	PF02779	Transketolase, pyrimidine binding domain
BkAM31D_07540	PF02780	Transketolase, C-terminal domain
BkAM31D_07545	PF02817	e3 binding domain
BkAM31D_07545	PF00364	Biotin-requiring enzyme
BkAM31D_07545	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BkAM31D_07550	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BkAM31D_07550	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BkAM31D_07555	PF00378	Enoyl-CoA hydratase/isomerase
BkAM31D_07560	PF00378	Enoyl-CoA hydratase/isomerase
BkAM31D_07565	PF13193	AMP-binding enzyme C-terminal domain
BkAM31D_07565	PF00501	AMP-binding enzyme
BkAM31D_07570	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BkAM31D_07570	PF02770	Acyl-CoA dehydrogenase, middle domain
BkAM31D_07570	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BkAM31D_07575	PF13458	Periplasmic binding protein
BkAM31D_07580	PF02653	Branched-chain amino acid transport system / permease component
BkAM31D_07585	PF02653	Branched-chain amino acid transport system / permease component
BkAM31D_07585	PF11862	Domain of unknown function (DUF3382)
BkAM31D_07590	PF00005	ABC transporter
BkAM31D_07595	PF00465	Iron-containing alcohol dehydrogenase 
BkAM31D_07605	PF03618	Kinase/pyrophosphorylase
BkAM31D_07620	PF03480	Bacterial extracellular solute-binding protein, family 7
BkAM31D_07625	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
BkAM31D_07625	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
BkAM31D_07630	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
BkAM31D_07635	PF03407	Nucleotide-diphospho-sugar transferase
BkAM31D_07640	PF00483	Nucleotidyl transferase
BkAM31D_07645	PF16363	GDP-mannose 4,6 dehydratase
BkAM31D_07650	PF01370	NAD dependent epimerase/dehydratase family
BkAM31D_07710	PF00005	ABC transporter
BkAM31D_07720	PF01266	FAD dependent oxidoreductase
BkAM31D_07730	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BkAM31D_07730	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BkAM31D_07735	PF04205	FMN-binding domain
BkAM31D_07735	PF03358	NADPH-dependent FMN reductase
BkAM31D_07735	PF00890	FAD binding domain
BkAM31D_07760	PF03466	LysR substrate binding domain
BkAM31D_07760	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BkAM31D_07765	PF00180	Isocitrate/isopropylmalate dehydrogenase
BkAM31D_07775	PF00664	ABC transporter transmembrane region
BkAM31D_07775	PF00005	ABC transporter
BkAM31D_07780	PF13409	Glutathione S-transferase, N-terminal domain
BkAM31D_07790	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BkAM31D_07820	PF03601	Conserved hypothetical protein 698
BkAM31D_07825	PF01515	Phosphate acetyl/butaryl transferase
BkAM31D_07835	PF03480	Bacterial extracellular solute-binding protein, family 7
BkAM31D_07840	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
BkAM31D_07840	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
BkAM31D_07845	PF00465	Iron-containing alcohol dehydrogenase 
BkAM31D_07850	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BkAM31D_07850	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BkAM31D_07850	PF00205	Thiamine pyrophosphate enzyme, central domain
BkAM31D_07855	PF03466	LysR substrate binding domain
BkAM31D_07855	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BkAM31D_07875	PF00180	Isocitrate/isopropylmalate dehydrogenase
BkAM31D_07875	PF18324	Hypothetical protein TT1725
BkAM31D_07890	PF00465	Iron-containing alcohol dehydrogenase 
BkAM31D_07895	PF03180	NLPA lipoprotein
BkAM31D_07900	PF09383	NIL domain
BkAM31D_07900	PF00005	ABC transporter
BkAM31D_07905	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_07910	PF01070	FMN-dependent dehydrogenase
BkAM31D_07920	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BkAM31D_07920	PF02378	Phosphotransferase system, EIIC 
BkAM31D_07920	PF00367	phosphotransferase system, EIIB
BkAM31D_07925	PF00072	Response regulator receiver domain
BkAM31D_07925	PF12833	Helix-turn-helix domain
BkAM31D_07930	PF00703	Glycosyl hydrolases family 2
BkAM31D_07930	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
BkAM31D_07930	PF02837	Glycosyl hydrolases family 2, sugar binding domain
BkAM31D_07955	PF00698	Acyl transferase domain
BkAM31D_07960	PF16957	Malonate decarboxylase, alpha subunit, transporter
BkAM31D_07965	PF01874	ATP:dephospho-CoA triphosphoribosyl transferase 
BkAM31D_07970	PF06857	Malonate decarboxylase delta subunit (MdcD)
BkAM31D_07975	PF01039	Carboxyl transferase domain
BkAM31D_07980	PF10620	Phosphoribosyl-dephospho-CoA transferase MdcG
BkAM31D_07995	PF00248	Aldo/keto reductase family
BkAM31D_08010	PF01389	OmpA-like transmembrane domain
BkAM31D_08010	PF00691	OmpA family
BkAM31D_08020	PF00158	Sigma-54 interaction domain
BkAM31D_08025	PF00202	Aminotransferase class-III
BkAM31D_08030	PF07729	FCD domain
BkAM31D_08030	PF00392	Bacterial regulatory proteins, gntR family
BkAM31D_08035	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BkAM31D_08035	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
BkAM31D_08060	PF01116	Fructose-bisphosphate aldolase class-II
BkAM31D_08080	PF00672	HAMP domain
BkAM31D_08080	PF02743	Cache domain
BkAM31D_08080	PF06580	Histidine kinase
BkAM31D_08080	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_08085	PF00072	Response regulator receiver domain
BkAM31D_08085	PF12833	Helix-turn-helix domain
BkAM31D_08135	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_08140	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_08145	PF00294	pfkB family carbohydrate kinase
BkAM31D_08150	PF08244	Glycosyl hydrolases family 32 C terminal
BkAM31D_08150	PF00251	Glycosyl hydrolases family 32 N-terminal domain
BkAM31D_08160	PF00005	ABC transporter
BkAM31D_08165	PF12679	ABC-2 family transporter protein
BkAM31D_08170	PF00072	Response regulator receiver domain
BkAM31D_08170	PF00486	Transcriptional regulatory protein, C terminal
BkAM31D_08175	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_08175	PF00989	PAS fold
BkAM31D_08175	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_08175	PF16736	Single Cache-like 
BkAM31D_08180	PF07690	Major Facilitator Superfamily
BkAM31D_08190	PF02082	Transcriptional regulator
BkAM31D_08200	PF01979	Amidohydrolase family
BkAM31D_08205	PF02973	Sialidase, N-terminal domain
BkAM31D_08205	PF00754	F5/8 type C domain
BkAM31D_08205	PF13088	BNR repeat-like domain
BkAM31D_08210	PF01418	Helix-turn-helix domain, rpiR family
BkAM31D_08210	PF01380	SIS domain
BkAM31D_08215	PF04131	Putative N-acetylmannosamine-6-phosphate epimerase
BkAM31D_08220	PF03480	Bacterial extracellular solute-binding protein, family 7
BkAM31D_08225	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
BkAM31D_08225	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
BkAM31D_08230	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
BkAM31D_08230	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
BkAM31D_08235	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
BkAM31D_08235	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
BkAM31D_08240	PF00480	ROK family
BkAM31D_08245	PF08970	Sporulation inhibitor A
BkAM31D_08250	PF00701	Dihydrodipicolinate synthetase family
BkAM31D_08255	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
BkAM31D_08265	PF00005	ABC transporter
BkAM31D_08270	PF07722	Peptidase C26
BkAM31D_08280	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BkAM31D_08285	PF01613	Flavin reductase like domain
BkAM31D_08290	PF01738	Dienelactone hydrolase family
BkAM31D_08295	PF07681	DoxX
BkAM31D_08300	PF03358	NADPH-dependent FMN reductase
BkAM31D_08315	PF05360	yiaA/B two helix domain
BkAM31D_08325	PF00005	ABC transporter
BkAM31D_08355	PF09680	Family of unknown function
BkAM31D_08360	PF06574	FAD synthetase
BkAM31D_08360	PF01687	Riboflavin kinase
BkAM31D_08365	PF01557	Fumarylacetoacetate (FAA) hydrolase family
BkAM31D_08370	PF01613	Flavin reductase like domain
BkAM31D_08375	PF06505	Activator of aromatic catabolism
BkAM31D_08375	PF00158	Sigma-54 interaction domain
BkAM31D_08375	PF02954	Bacterial regulatory protein, Fis family
BkAM31D_08375	PF02830	V4R domain
BkAM31D_08380	PF00561	alpha/beta hydrolase fold
BkAM31D_08385	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
BkAM31D_08390	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BkAM31D_08395	PF05145	Transition state regulatory protein AbrB
BkAM31D_08405	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
BkAM31D_08410	PF03480	Bacterial extracellular solute-binding protein, family 7
BkAM31D_08425	PF03480	Bacterial extracellular solute-binding protein, family 7
BkAM31D_08435	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
BkAM31D_08455	PF02954	Bacterial regulatory protein, Fis family
BkAM31D_08455	PF00072	Response regulator receiver domain
BkAM31D_08455	PF00158	Sigma-54 interaction domain
BkAM31D_08460	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BkAM31D_08460	PF02770	Acyl-CoA dehydrogenase, middle domain
BkAM31D_08460	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BkAM31D_08465	PF01012	Electron transfer flavoprotein domain
BkAM31D_08470	PF01012	Electron transfer flavoprotein domain
BkAM31D_08475	PF00766	Electron transfer flavoprotein FAD-binding domain
BkAM31D_08475	PF01012	Electron transfer flavoprotein domain
BkAM31D_08480	PF13183	4Fe-4S dicluster domain
BkAM31D_08480	PF02754	Cysteine-rich domain
BkAM31D_08485	PF01425	Amidase
BkAM31D_08490	PF00583	Acetyltransferase (GNAT) family
BkAM31D_08500	PF01614	Bacterial transcriptional regulator
BkAM31D_08500	PF09339	IclR helix-turn-helix domain
BkAM31D_08505	PF09339	IclR helix-turn-helix domain
BkAM31D_08505	PF01614	Bacterial transcriptional regulator
BkAM31D_08510	PF07690	Major Facilitator Superfamily
BkAM31D_08515	PF01494	FAD binding domain
BkAM31D_08525	PF01557	Fumarylacetoacetate (FAA) hydrolase family
BkAM31D_08555	PF01494	FAD binding domain
BkAM31D_08565	PF06050	2-hydroxyglutaryl-CoA dehydratase, D-component 
BkAM31D_08580	PF02515	CoA-transferase family III
BkAM31D_08585	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BkAM31D_08590	PF09587	Bacterial capsule synthesis protein PGA_cap
BkAM31D_08595	PF09587	Bacterial capsule synthesis protein PGA_cap
BkAM31D_08600	PF08530	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BkAM31D_08600	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
BkAM31D_08610	PF07690	Major Facilitator Superfamily
BkAM31D_08620	PF08530	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BkAM31D_08620	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
BkAM31D_08625	PF00356	Bacterial regulatory proteins, lacI family
BkAM31D_08630	PF09587	Bacterial capsule synthesis protein PGA_cap
BkAM31D_08640	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BkAM31D_08645	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_08650	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_08655	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_08655	PF12911	N-terminal TM domain of oligopeptide transport permease C
BkAM31D_08670	PF07859	alpha/beta hydrolase fold
BkAM31D_08675	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
BkAM31D_08675	PF08530	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BkAM31D_08680	PF01047	MarR family
BkAM31D_08685	PF00067	Cytochrome P450
BkAM31D_08695	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
BkAM31D_08700	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
BkAM31D_08710	PF00067	Cytochrome P450
BkAM31D_08715	PF17853	GGDEF-like domain
BkAM31D_08715	PF13556	PucR C-terminal helix-turn-helix domain
BkAM31D_08715	PF07905	Purine catabolism regulatory protein-like family
BkAM31D_08725	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
BkAM31D_08725	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
BkAM31D_08730	PF00108	Thiolase, N-terminal domain
BkAM31D_08730	PF02803	Thiolase, C-terminal domain
BkAM31D_08735	PF13193	AMP-binding enzyme C-terminal domain
BkAM31D_08735	PF00501	AMP-binding enzyme
BkAM31D_08740	PF02386	Cation transport protein
BkAM31D_08745	PF02080	TrkA-C domain
BkAM31D_08745	PF02254	TrkA-N domain
BkAM31D_08780	PF03480	Bacterial extracellular solute-binding protein, family 7
BkAM31D_08800	PF01757	Acyltransferase family
BkAM31D_08805	PF01757	Acyltransferase family
BkAM31D_08815	PF00171	Aldehyde dehydrogenase family
BkAM31D_08820	PF00501	AMP-binding enzyme
BkAM31D_08820	PF13193	AMP-binding enzyme C-terminal domain
BkAM31D_08825	PF13193	AMP-binding enzyme C-terminal domain
BkAM31D_08825	PF00501	AMP-binding enzyme
BkAM31D_08830	PF00501	AMP-binding enzyme
BkAM31D_08830	PF13193	AMP-binding enzyme C-terminal domain
BkAM31D_08845	PF00107	Zinc-binding dehydrogenase
BkAM31D_08845	PF08240	Alcohol dehydrogenase GroES-like domain
BkAM31D_08870	PF00196	Bacterial regulatory proteins, luxR family
BkAM31D_08870	PF00072	Response regulator receiver domain
BkAM31D_08875	PF12419	SNF2 Helicase protein 
BkAM31D_08875	PF00271	Helicase conserved C-terminal domain
BkAM31D_08875	PF00176	SNF2 family N-terminal domain
BkAM31D_08880	PF04434	SWIM zinc finger
BkAM31D_08880	PF00271	Helicase conserved C-terminal domain
BkAM31D_08880	PF00176	SNF2 family N-terminal domain
BkAM31D_08895	PF00005	ABC transporter
BkAM31D_08905	PF00378	Enoyl-CoA hydratase/isomerase
BkAM31D_08940	PF01575	MaoC like domain
BkAM31D_08960	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BkAM31D_08960	PF02770	Acyl-CoA dehydrogenase, middle domain
BkAM31D_08960	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BkAM31D_08965	PF00583	Acetyltransferase (GNAT) family
BkAM31D_08965	PF13380	CoA binding domain
BkAM31D_08965	PF13607	Succinyl-CoA ligase like flavodoxin domain
BkAM31D_08970	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
BkAM31D_08970	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
BkAM31D_08975	PF02803	Thiolase, C-terminal domain
BkAM31D_08975	PF00108	Thiolase, N-terminal domain
BkAM31D_08980	PF01012	Electron transfer flavoprotein domain
BkAM31D_08985	PF00766	Electron transfer flavoprotein FAD-binding domain
BkAM31D_08985	PF01012	Electron transfer flavoprotein domain
BkAM31D_08990	PF03061	Thioesterase superfamily
BkAM31D_08995	PF02954	Bacterial regulatory protein, Fis family
BkAM31D_08995	PF00989	PAS fold
BkAM31D_08995	PF00158	Sigma-54 interaction domain
BkAM31D_09005	PF00378	Enoyl-CoA hydratase/isomerase
BkAM31D_09010	PF00994	Probable molybdopterin binding domain
BkAM31D_09025	PF07683	Cobalamin synthesis protein cobW C-terminal domain
BkAM31D_09025	PF02492	CobW/HypB/UreG, nucleotide-binding domain
BkAM31D_09040	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
BkAM31D_09040	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BkAM31D_09045	PF01903	CbiX
BkAM31D_09050	PF02571	Precorrin-6x reductase CbiJ/CobK
BkAM31D_09055	PF02570	Precorrin-8X methylmutase
BkAM31D_09060	PF01888	CbiD
BkAM31D_09065	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BkAM31D_09070	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BkAM31D_09075	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BkAM31D_09080	PF11761	Cobalamin biosynthesis central region
BkAM31D_09080	PF01890	Cobalamin synthesis G C-terminus
BkAM31D_09080	PF11760	Cobalamin synthesis G N-terminal
BkAM31D_09085	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
BkAM31D_09085	PF07685	CobB/CobQ-like glutamine amidotransferase domain
BkAM31D_09090	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BkAM31D_09100	PF00881	Nitroreductase family
BkAM31D_09115	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_09120	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_09120	PF12911	N-terminal TM domain of oligopeptide transport permease C
BkAM31D_09125	PF00005	ABC transporter
BkAM31D_09125	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BkAM31D_09130	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
BkAM31D_09130	PF12557	Cob(I)alamin adenosyltransferase N terminal 
BkAM31D_09135	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
BkAM31D_09135	PF07685	CobB/CobQ-like glutamine amidotransferase domain
BkAM31D_09145	PF00253	Ribosomal protein S14p/S29e
BkAM31D_09155	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
BkAM31D_09160	PF16653	Saccharopine dehydrogenase C-terminal domain
BkAM31D_09160	PF03435	Saccharopine dehydrogenase NADP binding domain
BkAM31D_09165	PF13472	GDSL-like Lipase/Acylhydrolase family
BkAM31D_09185	PF01625	Peptide methionine sulfoxide reductase
BkAM31D_09190	PF07486	Cell Wall Hydrolase
BkAM31D_09190	PF01471	Putative peptidoglycan binding domain
BkAM31D_09200	PF00933	Glycosyl hydrolase family 3 N terminal domain
BkAM31D_09215	PF09339	IclR helix-turn-helix domain
BkAM31D_09215	PF01614	Bacterial transcriptional regulator
BkAM31D_09230	PF00209	Sodium:neurotransmitter symporter family
BkAM31D_09250	PF00266	Aminotransferase class-V
BkAM31D_09255	PF00440	Bacterial regulatory proteins, tetR family
BkAM31D_09255	PF17934	Tetracyclin repressor-like, C-terminal domain
BkAM31D_09260	PF07995	Glucose / Sorbosone dehydrogenase
BkAM31D_09265	PF00072	Response regulator receiver domain
BkAM31D_09265	PF08664	YcbB domain
BkAM31D_09270	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_09275	PF01235	Sodium:alanine symporter family
BkAM31D_09290	PF01381	Helix-turn-helix
BkAM31D_09295	PF04960	Glutaminase
BkAM31D_09300	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
BkAM31D_09300	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BkAM31D_09320	PF07690	Major Facilitator Superfamily
BkAM31D_09325	PF07690	Major Facilitator Superfamily
BkAM31D_09345	PF13411	MerR HTH family regulatory protein
BkAM31D_09350	PF00293	NUDIX domain
BkAM31D_09350	PF13344	Haloacid dehalogenase-like hydrolase
BkAM31D_09355	PF00005	ABC transporter
BkAM31D_09375	PF07730	Histidine kinase
BkAM31D_09380	PF00196	Bacterial regulatory proteins, luxR family
BkAM31D_09380	PF00072	Response regulator receiver domain
BkAM31D_09425	PF00082	Subtilase family
BkAM31D_09430	PF00082	Subtilase family
BkAM31D_09435	PF00144	Beta-lactamase
BkAM31D_09445	PF13472	GDSL-like Lipase/Acylhydrolase family
BkAM31D_09450	PF01906	Putative heavy-metal-binding
BkAM31D_09465	PF00011	Hsp20/alpha crystallin family
BkAM31D_09470	PF10970	Spore germination protein GerPE 
BkAM31D_09480	PF10737	Spore germination protein GerPC
BkAM31D_09485	PF10803	Spore germination GerPB
BkAM31D_09490	PF10676	Spore germination protein gerPA/gerPF
BkAM31D_09500	PF00672	HAMP domain
BkAM31D_09500	PF06580	Histidine kinase
BkAM31D_09500	PF02743	Cache domain
BkAM31D_09500	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_09505	PF12833	Helix-turn-helix domain
BkAM31D_09505	PF02805	Metal binding domain of Ada
BkAM31D_09515	PF02435	Levansucrase/Invertase
BkAM31D_09520	PF02435	Levansucrase/Invertase
BkAM31D_09525	PF02435	Levansucrase/Invertase
BkAM31D_09530	PF08244	Glycosyl hydrolases family 32 C terminal
BkAM31D_09530	PF00251	Glycosyl hydrolases family 32 N-terminal domain
BkAM31D_09535	PF00356	Bacterial regulatory proteins, lacI family
BkAM31D_09540	PF00356	Bacterial regulatory proteins, lacI family
BkAM31D_09545	PF13416	Bacterial extracellular solute-binding protein
BkAM31D_09555	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_09560	PF00294	pfkB family carbohydrate kinase
BkAM31D_09565	PF04854	Protein of unknown function, DUF624
BkAM31D_09570	PF08244	Glycosyl hydrolases family 32 C terminal
BkAM31D_09570	PF00251	Glycosyl hydrolases family 32 N-terminal domain
BkAM31D_09585	PF13183	4Fe-4S dicluster domain
BkAM31D_09585	PF02754	Cysteine-rich domain
BkAM31D_09600	PF00069	Protein kinase domain
BkAM31D_09600	PF03793	PASTA domain
BkAM31D_09670	PF13086	AAA domain
BkAM31D_09670	PF13087	AAA domain
BkAM31D_09670	PF13195	Protein of unknown function (DUF4011)
BkAM31D_09700	PF07669	Eco57I restriction-modification methylase
BkAM31D_09700	PF02384	N-6 DNA Methylase
BkAM31D_09715	PF00271	Helicase conserved C-terminal domain
BkAM31D_09715	PF00176	SNF2 family N-terminal domain
BkAM31D_09745	PF13817	IS66 C-terminal element
BkAM31D_09745	PF03050	Transposase IS66 family 
BkAM31D_09745	PF13005	zinc-finger binding domain of transposase IS66 
BkAM31D_09745	PF13007	Transposase C of IS166 homeodomain
BkAM31D_09750	PF13361	UvrD-like helicase C-terminal domain
BkAM31D_09750	PF00580	UvrD/REP helicase N-terminal domain
BkAM31D_09760	PF00665	Integrase core domain
BkAM31D_09765	PF01695	IstB-like ATP binding protein
BkAM31D_09770	PF03050	Transposase IS66 family 
BkAM31D_09770	PF13817	IS66 C-terminal element
BkAM31D_09770	PF13007	Transposase C of IS166 homeodomain
BkAM31D_09770	PF13005	zinc-finger binding domain of transposase IS66 
BkAM31D_09790	PF14579	Helix-hairpin-helix motif
BkAM31D_09790	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
BkAM31D_09790	PF00929	Exonuclease
BkAM31D_09790	PF02811	PHP domain
BkAM31D_09790	PF07733	Bacterial DNA polymerase III alpha NTPase domain
BkAM31D_09795	PF00356	Bacterial regulatory proteins, lacI family
BkAM31D_09800	PF13407	Periplasmic binding protein domain
BkAM31D_09805	PF00005	ABC transporter
BkAM31D_09815	PF02653	Branched-chain amino acid transport system / permease component
BkAM31D_09820	PF02733	Dak1 domain
BkAM31D_09825	PF02734	DAK2 domain
BkAM31D_09830	PF00072	Response regulator receiver domain
BkAM31D_09830	PF12833	Helix-turn-helix domain
BkAM31D_09835	PF00672	HAMP domain
BkAM31D_09835	PF06580	Histidine kinase
BkAM31D_09835	PF02743	Cache domain
BkAM31D_09835	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_09850	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_09855	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_09885	PF09370	Phosphoenolpyruvate hydrolase-like
BkAM31D_09895	PF03480	Bacterial extracellular solute-binding protein, family 7
BkAM31D_09900	PF01557	Fumarylacetoacetate (FAA) hydrolase family
BkAM31D_09910	PF08378	Nuclease-related domain
BkAM31D_09930	PF00313	'Cold-shock' DNA-binding domain
BkAM31D_09935	PF00270	DEAD/DEAH box helicase
BkAM31D_09935	PF00271	Helicase conserved C-terminal domain
BkAM31D_09935	PF03880	DbpA RNA binding domain   
BkAM31D_09955	PF07690	Major Facilitator Superfamily
BkAM31D_09960	PF01554	MatE
BkAM31D_09965	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
BkAM31D_09970	PF07969	Amidohydrolase family
BkAM31D_09980	PF02954	Bacterial regulatory protein, Fis family
BkAM31D_09980	PF00158	Sigma-54 interaction domain
BkAM31D_09980	PF01590	GAF domain
BkAM31D_09985	PF00676	Dehydrogenase E1 component
BkAM31D_09990	PF00676	Dehydrogenase E1 component
BkAM31D_09995	PF02780	Transketolase, C-terminal domain
BkAM31D_09995	PF02779	Transketolase, pyrimidine binding domain
BkAM31D_10020	PF00106	short chain dehydrogenase
BkAM31D_10040	PF05525	Branched-chain amino acid transport protein
BkAM31D_10045	PF12732	YtxH-like protein
BkAM31D_10050	PF01910	Thiamine-binding protein
BkAM31D_10080	PF07228	Stage II sporulation protein E (SpoIIE)
BkAM31D_10080	PF13426	PAS domain
BkAM31D_10085	PF12697	Alpha/beta hydrolase family
BkAM31D_10090	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
BkAM31D_10090	PF01568	Molydopterin dinucleotide binding domain
BkAM31D_10090	PF00384	Molybdopterin oxidoreductase
BkAM31D_10095	PF00132	Bacterial transferase hexapeptide (six repeats)
BkAM31D_10100	PF08447	PAS fold
BkAM31D_10100	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_10100	PF00989	PAS fold
BkAM31D_10100	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_10105	PF00005	ABC transporter
BkAM31D_10105	PF13732	Domain of unknown function (DUF4162)
BkAM31D_10110	PF01061	ABC-2 type transporter
BkAM31D_10115	PF00672	HAMP domain
BkAM31D_10115	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BkAM31D_10115	PF02743	Cache domain
BkAM31D_10120	PF17770	Ribonuclease J C-terminal domain
BkAM31D_10120	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
BkAM31D_10120	PF00753	Metallo-beta-lactamase superfamily
BkAM31D_10150	PF00877	NlpC/P60 family
BkAM31D_10150	PF01476	LysM domain
BkAM31D_10160	PF03845	Spore germination protein
BkAM31D_10165	PF05504	Spore germination B3/ GerAC like, C-terminal 
BkAM31D_10170	PF03323	Bacillus/Clostridium GerA spore germination protein
BkAM31D_10185	PF01557	Fumarylacetoacetate (FAA) hydrolase family
BkAM31D_10305	PF03466	LysR substrate binding domain
BkAM31D_10305	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BkAM31D_10310	PF03401	Tripartite tricarboxylate transporter family receptor
BkAM31D_10315	PF01970	Tripartite tricarboxylate transporter TctA family
BkAM31D_10335	PF02080	TrkA-C domain
BkAM31D_10335	PF06826	Predicted Permease Membrane Region
BkAM31D_10350	PF00209	Sodium:neurotransmitter symporter family
BkAM31D_10355	PF01773	Na+ dependent nucleoside transporter N-terminus
BkAM31D_10355	PF07662	Na+ dependent nucleoside transporter C-terminus
BkAM31D_10380	PF10415	Fumarase C C-terminus
BkAM31D_10380	PF00206	Lyase
BkAM31D_10390	PF01209	ubiE/COQ5 methyltransferase family
BkAM31D_10395	PF00311	Phosphoenolpyruvate carboxylase
BkAM31D_10400	PF00795	Carbon-nitrogen hydrolase
BkAM31D_10400	PF00583	Acetyltransferase (GNAT) family
BkAM31D_10405	PF00583	Acetyltransferase (GNAT) family
BkAM31D_10415	PF01638	HxlR-like helix-turn-helix
BkAM31D_10420	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BkAM31D_10425	PF07681	DoxX
BkAM31D_10430	PF00056	lactate/malate dehydrogenase, NAD binding domain
BkAM31D_10430	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BkAM31D_10435	PF07687	Peptidase dimerisation domain
BkAM31D_10435	PF01546	Peptidase family M20/M25/M40
BkAM31D_10460	PF00176	SNF2 family N-terminal domain
BkAM31D_10460	PF00271	Helicase conserved C-terminal domain
BkAM31D_10460	PF04434	SWIM zinc finger
BkAM31D_10470	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BkAM31D_10470	PF01872	RibD C-terminal domain
BkAM31D_10475	PF00677	Lumazine binding domain
BkAM31D_10480	PF00925	GTP cyclohydrolase II
BkAM31D_10480	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
BkAM31D_10485	PF00885	6,7-dimethyl-8-ribityllumazine synthase
BkAM31D_10495	PF10903	Protein of unknown function (DUF2691)
BkAM31D_10500	PF00583	Acetyltransferase (GNAT) family
BkAM31D_10505	PF03745	Domain of unknown function (DUF309)
BkAM31D_10510	PF02616	Segregation and condensation protein ScpA
BkAM31D_10515	PF04079	Segregation and condensation complex subunit ScpB
BkAM31D_10520	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
BkAM31D_10520	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
BkAM31D_10530	PF04239	Protein of unknown function (DUF421)
BkAM31D_10545	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
BkAM31D_10550	PF07451	Stage V sporulation protein AD (SpoVAD)
BkAM31D_10555	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
BkAM31D_10565	PF04239	Protein of unknown function (DUF421)
BkAM31D_10570	PF04239	Protein of unknown function (DUF421)
BkAM31D_10575	PF07943	Penicillin-binding protein 5, C-terminal domain
BkAM31D_10575	PF00768	D-alanyl-D-alanine carboxypeptidase
BkAM31D_10580	PF07670	Nucleoside recognition
BkAM31D_10585	PF07670	Nucleoside recognition
BkAM31D_10600	PF01479	S4 domain
BkAM31D_10600	PF00849	RNA pseudouridylate synthase
BkAM31D_10605	PF00578	AhpC/TSA family
BkAM31D_10620	PF01578	Cytochrome C assembly protein
BkAM31D_10625	PF00072	Response regulator receiver domain
BkAM31D_10625	PF00486	Transcriptional regulatory protein, C terminal
BkAM31D_10640	PF01717	Cobalamin-independent synthase, Catalytic domain
BkAM31D_10640	PF08267	Cobalamin-independent synthase, N-terminal domain
BkAM31D_10655	PF01497	Periplasmic binding protein
BkAM31D_10660	PF01032	FecCD transport family
BkAM31D_10665	PF00005	ABC transporter
BkAM31D_10670	PF00005	ABC transporter
BkAM31D_10675	PF03186	CobD/Cbib protein
BkAM31D_10680	PF00155	Aminotransferase class I and II
BkAM31D_10685	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
BkAM31D_10690	PF02654	Cobalamin-5-phosphate synthase
BkAM31D_10705	PF01923	Cobalamin adenosyltransferase
BkAM31D_10710	PF04294	VanW like protein
BkAM31D_10715	PF03323	Bacillus/Clostridium GerA spore germination protein
BkAM31D_10720	PF03845	Spore germination protein
BkAM31D_10725	PF05504	Spore germination B3/ GerAC like, C-terminal 
BkAM31D_10730	PF01551	Peptidase family M23
BkAM31D_10730	PF04225	Opacity-associated protein A LysM-like domain
BkAM31D_10740	PF01476	LysM domain
BkAM31D_10740	PF00246	Zinc carboxypeptidase
BkAM31D_10745	PF07729	FCD domain
BkAM31D_10745	PF00392	Bacterial regulatory proteins, gntR family
BkAM31D_10755	PF14493	Helix-turn-helix domain
BkAM31D_10760	PF00271	Helicase conserved C-terminal domain
BkAM31D_10760	PF00270	DEAD/DEAH box helicase
BkAM31D_10765	PF02517	CPBP intramembrane metalloprotease
BkAM31D_10805	PF00149	Calcineurin-like phosphoesterase
BkAM31D_10815	PF05389	Negative regulator of genetic competence (MecA)
BkAM31D_10820	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
BkAM31D_10820	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BkAM31D_10830	PF17763	Glutaminase/Asparaginase C-terminal domain
BkAM31D_10830	PF00710	Asparaginase, N-terminal
BkAM31D_10835	PF13367	PrsW family intramembrane metalloprotease
BkAM31D_10850	PF01053	Cys/Met metabolism PLP-dependent enzyme
BkAM31D_10855	PF02574	Homocysteine S-methyltransferase
BkAM31D_10855	PF02219	Methylenetetrahydrofolate reductase
BkAM31D_10860	PF02965	Vitamin B12 dependent methionine synthase, activation domain
BkAM31D_10860	PF02574	Homocysteine S-methyltransferase
BkAM31D_10860	PF02607	B12 binding domain
BkAM31D_10860	PF00809	Pterin binding enzyme
BkAM31D_10860	PF02310	B12 binding domain
BkAM31D_10865	PF07486	Cell Wall Hydrolase
BkAM31D_10865	PF01471	Putative peptidoglycan binding domain
BkAM31D_10885	PF02224	Cytidylate kinase
BkAM31D_10890	PF01553	Acyltransferase
BkAM31D_10895	PF00575	S1 RNA binding domain
BkAM31D_10900	PF01070	FMN-dependent dehydrogenase
BkAM31D_10905	PF14140	YpzI-like protein
BkAM31D_10915	PF01926	50S ribosome-binding GTPase
BkAM31D_10915	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
BkAM31D_10920	PF02660	Glycerol-3-phosphate acyltransferase
BkAM31D_10925	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
BkAM31D_10925	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
BkAM31D_10930	PF14069	Stage VI sporulation protein F
BkAM31D_10935	PF10966	Protein of unknown function (DUF2768)
BkAM31D_10945	PF09547	Stage IV sporulation protein A (spore_IV_A)
BkAM31D_10950	PF02081	Tryptophan RNA-binding attenuator protein
BkAM31D_10955	PF07307	Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
BkAM31D_10965	PF01040	UbiA prenyltransferase family
BkAM31D_10975	PF02621	Menaquinone biosynthesis
BkAM31D_10980	PF00348	Polyprenyl synthetase
BkAM31D_10985	PF00334	Nucleoside diphosphate kinase
BkAM31D_10990	PF03705	CheR methyltransferase, all-alpha domain
BkAM31D_10990	PF01739	CheR methyltransferase, SAM binding domain
BkAM31D_11000	PF01264	Chorismate synthase
BkAM31D_11005	PF01761	3-dehydroquinate synthase
BkAM31D_11010	PF07736	Chorismate mutase type I
BkAM31D_11015	PF00425	chorismate binding enzyme
BkAM31D_11015	PF04715	Anthranilate synthase component I, N terminal region
BkAM31D_11020	PF00591	Glycosyl transferase family, a/b domain
BkAM31D_11020	PF02885	Glycosyl transferase family, helical bundle domain
BkAM31D_11025	PF00218	Indole-3-glycerol phosphate synthase
BkAM31D_11030	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
BkAM31D_11035	PF00291	Pyridoxal-phosphate dependent enzyme
BkAM31D_11040	PF00290	Tryptophan synthase alpha chain
BkAM31D_11045	PF00155	Aminotransferase class I and II
BkAM31D_11050	PF01842	ACT domain
BkAM31D_11050	PF02153	Prephenate dehydrogenase
BkAM31D_11055	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
BkAM31D_11060	PF01979	Amidohydrolase family
BkAM31D_11070	PF08864	UPF0302 domain
BkAM31D_11070	PF08858	IDEAL domain
BkAM31D_11080	PF00355	Rieske [2Fe-2S] domain
BkAM31D_11085	PF00033	Cytochrome b/b6/petB
BkAM31D_11090	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
BkAM31D_11090	PF00032	Cytochrome b(C-terminal)/b6/petD
BkAM31D_11095	PF07187	Protein of unknown function (DUF1405)
BkAM31D_11100	PF09577	Sporulation protein YpjB (SpoYpjB)
BkAM31D_11105	PF04298	Putative neutral zinc metallopeptidase
BkAM31D_11110	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BkAM31D_11110	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BkAM31D_11115	PF03819	MazG nucleotide pyrophosphohydrolase domain
BkAM31D_11120	PF05173	Dihydrodipicolinate reductase, C-terminus
BkAM31D_11120	PF01113	Dihydrodipicolinate reductase, N-terminus
BkAM31D_11125	PF02142	MGS-like domain
BkAM31D_11130	PF02585	GlcNAc-PI de-N-acetylase
BkAM31D_11135	PF13439	Glycosyltransferase Family 4
BkAM31D_11135	PF00534	Glycosyl transferases group 1
BkAM31D_11145	PF08279	HTH domain
BkAM31D_11145	PF03099	Biotin/lipoate A/B protein ligase family
BkAM31D_11145	PF02237	Biotin protein ligase C terminal domain
BkAM31D_11165	PF02569	Pantoate-beta-alanine ligase
BkAM31D_11170	PF02261	Aspartate decarboxylase
BkAM31D_11180	PF00929	Exonuclease
BkAM31D_11180	PF13307	Helicase C-terminal domain
BkAM31D_11180	PF04851	Type III restriction enzyme, res subunit
BkAM31D_11190	PF14084	Protein of unknown function (DUF4264)
BkAM31D_11200	PF00155	Aminotransferase class I and II
BkAM31D_11205	PF01336	OB-fold nucleic acid binding domain
BkAM31D_11205	PF00152	tRNA synthetases class II (D, K and N) 
BkAM31D_11210	PF07261	Replication initiation and membrane attachment
BkAM31D_11215	PF00730	HhH-GPD superfamily base excision DNA repair protein
BkAM31D_11215	PF00633	Helix-hairpin-helix motif
BkAM31D_11215	PF10576	Iron-sulfur binding domain of endonuclease III
BkAM31D_11235	PF00905	Penicillin binding protein transpeptidase domain
BkAM31D_11235	PF00912	Transglycosylase
BkAM31D_11240	PF03838	Recombination protein U
BkAM31D_11245	PF10720	Protein of unknown function (DUF2515)
BkAM31D_11250	PF13411	MerR HTH family regulatory protein
BkAM31D_11260	PF03458	UPF0126 domain
BkAM31D_11265	PF03458	UPF0126 domain
BkAM31D_11275	PF00291	Pyridoxal-phosphate dependent enzyme
BkAM31D_11275	PF00585	C-terminal regulatory domain of Threonine dehydratase
BkAM31D_11285	PF01965	DJ-1/PfpI family
BkAM31D_11290	PF12706	Beta-lactamase superfamily domain
BkAM31D_11300	PF00085	Thioredoxin
BkAM31D_11305	PF06491	Disulphide isomerase
BkAM31D_11320	PF13769	Virulence factor
BkAM31D_11320	PF08712	Scaffold protein Nfu/NifU N terminal
BkAM31D_11330	PF03703	Bacterial PH domain
BkAM31D_11335	PF03703	Bacterial PH domain
BkAM31D_11345	PF00753	Metallo-beta-lactamase superfamily
BkAM31D_11345	PF00258	Flavodoxin
BkAM31D_11375	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
BkAM31D_11375	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BkAM31D_11380	PF14005	YpjP-like protein
BkAM31D_11385	PF00067	Cytochrome P450
BkAM31D_11425	PF01053	Cys/Met metabolism PLP-dependent enzyme
BkAM31D_11430	PF07687	Peptidase dimerisation domain
BkAM31D_11430	PF01546	Peptidase family M20/M25/M40
BkAM31D_11435	PF03447	Homoserine dehydrogenase, NAD binding domain
BkAM31D_11435	PF00742	Homoserine dehydrogenase
BkAM31D_11435	PF01842	ACT domain
BkAM31D_11440	PF00171	Aldehyde dehydrogenase family
BkAM31D_11445	PF00557	Metallopeptidase family M24
BkAM31D_11445	PF01321	Creatinase/Prolidase N-terminal domain
BkAM31D_11450	PF00892	EamA-like transporter family
BkAM31D_11455	PF00701	Dihydrodipicolinate synthetase family
BkAM31D_11465	PF09388	Spo0E like sporulation regulatory protein
BkAM31D_11505	PF00313	'Cold-shock' DNA-binding domain
BkAM31D_11510	PF05223	NTF2-like N-terminal transpeptidase domain
BkAM31D_11510	PF03717	Penicillin-binding Protein dimerisation domain
BkAM31D_11510	PF00905	Penicillin binding protein transpeptidase domain
BkAM31D_11515	PF05223	NTF2-like N-terminal transpeptidase domain
BkAM31D_11515	PF03717	Penicillin-binding Protein dimerisation domain
BkAM31D_11515	PF00905	Penicillin binding protein transpeptidase domain
BkAM31D_11530	PF00271	Helicase conserved C-terminal domain
BkAM31D_11530	PF09369	Domain of unknown function (DUF1998)
BkAM31D_11530	PF00270	DEAD/DEAH box helicase
BkAM31D_11535	PF13482	RNase_H superfamily
BkAM31D_11545	PF06908	YspA SLOG family
BkAM31D_11550	PF05103	DivIVA protein
BkAM31D_11555	PF13456	Reverse transcriptase-like
BkAM31D_11570	PF01170	Putative RNA methylase family UPF0020
BkAM31D_11570	PF02926	THUMP domain
BkAM31D_11575	PF13936	Helix-turn-helix domain
BkAM31D_11575	PF00665	Integrase core domain
BkAM31D_11625	PF00005	ABC transporter
BkAM31D_11630	PF09529	Integral membrane protein (intg_mem_TP0381)
BkAM31D_11645	PF00027	Cyclic nucleotide-binding domain
BkAM31D_11645	PF00325	Bacterial regulatory proteins, crp family
BkAM31D_11650	PF04405	Domain of Unknown function (DUF542)  
BkAM31D_11650	PF01814	Hemerythrin HHE cation binding domain
BkAM31D_11655	PF13186	Iron-sulfur cluster-binding domain
BkAM31D_11655	PF04055	Radical SAM superfamily
BkAM31D_11660	PF14256	YwiC-like protein
BkAM31D_11665	PF08240	Alcohol dehydrogenase GroES-like domain
BkAM31D_11665	PF00107	Zinc-binding dehydrogenase
BkAM31D_11675	PF07687	Peptidase dimerisation domain
BkAM31D_11675	PF01546	Peptidase family M20/M25/M40
BkAM31D_11680	PF07687	Peptidase dimerisation domain
BkAM31D_11680	PF01546	Peptidase family M20/M25/M40
BkAM31D_11685	PF03070	TENA/THI-4/PQQC family
BkAM31D_11690	PF00005	ABC transporter
BkAM31D_11695	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_11700	PF09084	NMT1/THI5 like
BkAM31D_11705	PF01569	PAP2 superfamily
BkAM31D_11725	PF03466	LysR substrate binding domain
BkAM31D_11725	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BkAM31D_11730	PF00158	Sigma-54 interaction domain
BkAM31D_11730	PF00989	PAS fold
BkAM31D_11730	PF02954	Bacterial regulatory protein, Fis family
BkAM31D_11735	PF01144	Coenzyme A transferase
BkAM31D_11755	PF11009	Protein of unknown function (DUF2847)
BkAM31D_11770	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
BkAM31D_11770	PF00925	GTP cyclohydrolase II
BkAM31D_11775	PF01494	FAD binding domain
BkAM31D_11785	PF10011	Predicted membrane protein (DUF2254)
BkAM31D_11790	PF13380	CoA binding domain
BkAM31D_11795	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_11795	PF00204	DNA gyrase B
BkAM31D_11795	PF00986	DNA gyrase B subunit, carboxyl terminus
BkAM31D_11795	PF01751	Toprim domain
BkAM31D_11800	PF03989	DNA gyrase C-terminal domain, beta-propeller
BkAM31D_11800	PF00521	DNA gyrase/topoisomerase IV, subunit A
BkAM31D_11805	PF04307	LexA-binding, inner membrane-associated putative hydrolase
BkAM31D_11810	PF00365	Phosphofructokinase
BkAM31D_11835	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
BkAM31D_11850	PF04294	VanW like protein
BkAM31D_11875	PF03358	NADPH-dependent FMN reductase
BkAM31D_11880	PF01047	MarR family
BkAM31D_11885	PF13229	Right handed beta helix region
BkAM31D_11900	PF11514	Protein of unknown function (DUF3219)
BkAM31D_11910	PF00107	Zinc-binding dehydrogenase
BkAM31D_11910	PF13823	Alcohol dehydrogenase GroES-associated
BkAM31D_11910	PF08240	Alcohol dehydrogenase GroES-like domain
BkAM31D_11915	PF02675	S-adenosylmethionine decarboxylase 
BkAM31D_11945	PF03737	Aldolase/RraA
BkAM31D_11950	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
BkAM31D_11950	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
BkAM31D_11955	PF02801	Beta-ketoacyl synthase, C-terminal domain
BkAM31D_11955	PF00109	Beta-ketoacyl synthase, N-terminal domain
BkAM31D_11960	PF01625	Peptide methionine sulfoxide reductase
BkAM31D_11965	PF07690	Major Facilitator Superfamily
BkAM31D_11980	PF00355	Rieske [2Fe-2S] domain
BkAM31D_11985	PF02901	Pyruvate formate lyase-like
BkAM31D_11985	PF01228	Glycine radical
BkAM31D_11990	PF04055	Radical SAM superfamily
BkAM31D_11995	PF03063	Prismane/CO dehydrogenase family
BkAM31D_12000	PF03458	UPF0126 domain
BkAM31D_12005	PF13556	PucR C-terminal helix-turn-helix domain
BkAM31D_12005	PF17853	GGDEF-like domain
BkAM31D_12005	PF05651	Putative sugar diacid recognition
BkAM31D_12020	PF01546	Peptidase family M20/M25/M40
BkAM31D_12035	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BkAM31D_12040	PF00072	Response regulator receiver domain
BkAM31D_12040	PF00486	Transcriptional regulatory protein, C terminal
BkAM31D_12045	PF00989	PAS fold
BkAM31D_12045	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_12045	PF00672	HAMP domain
BkAM31D_12045	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_12045	PF18698	Histidine kinase sensor domain
BkAM31D_12060	PF04607	Region found in RelA / SpoT proteins
BkAM31D_12070	PF00183	Hsp90 protein
BkAM31D_12090	PF13005	zinc-finger binding domain of transposase IS66 
BkAM31D_12090	PF13007	Transposase C of IS166 homeodomain
BkAM31D_12090	PF13817	IS66 C-terminal element
BkAM31D_12090	PF03050	Transposase IS66 family 
BkAM31D_12095	PF01757	Acyltransferase family
BkAM31D_12115	PF13533	Biotin-lipoyl like
BkAM31D_12120	PF00873	AcrB/AcrD/AcrF family
BkAM31D_12130	PF01022	Bacterial regulatory protein, arsR family
BkAM31D_12135	PF00557	Metallopeptidase family M24
BkAM31D_12145	PF10609	NUBPL iron-transfer P-loop NTPase
BkAM31D_12150	PF00325	Bacterial regulatory proteins, crp family
BkAM31D_12150	PF00027	Cyclic nucleotide-binding domain
BkAM31D_12175	PF12800	4Fe-4S binding domain
BkAM31D_12175	PF13247	4Fe-4S dicluster domain
BkAM31D_12190	PF00027	Cyclic nucleotide-binding domain
BkAM31D_12190	PF00325	Bacterial regulatory proteins, crp family
BkAM31D_12200	PF00155	Aminotransferase class I and II
BkAM31D_12220	PF00313	'Cold-shock' DNA-binding domain
BkAM31D_12245	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
BkAM31D_12250	PF04239	Protein of unknown function (DUF421)
BkAM31D_12255	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
BkAM31D_12255	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BkAM31D_12260	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BkAM31D_12260	PF03466	LysR substrate binding domain
BkAM31D_12265	PF00175	Oxidoreductase NAD-binding domain 
BkAM31D_12265	PF00258	Flavodoxin
BkAM31D_12265	PF00667	FAD binding domain
BkAM31D_12270	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
BkAM31D_12270	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
BkAM31D_12275	PF00753	Metallo-beta-lactamase superfamily
BkAM31D_12280	PF00465	Iron-containing alcohol dehydrogenase 
BkAM31D_12285	PF10776	Protein of unknown function (DUF2600)
BkAM31D_12290	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_12290	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_12290	PF02743	Cache domain
BkAM31D_12295	PF00589	Phage integrase family
BkAM31D_12295	PF13495	Phage integrase, N-terminal SAM-like domain
BkAM31D_12300	PF01699	Sodium/calcium exchanger protein
BkAM31D_12315	PF00296	Luciferase-like monooxygenase
BkAM31D_12325	PF08141	Small acid-soluble spore protein H family
BkAM31D_12335	PF17871	AAA lid domain
BkAM31D_12335	PF10431	C-terminal, D2-small domain, of ClpB protein 
BkAM31D_12335	PF07724	AAA domain (Cdc48 subfamily)
BkAM31D_12335	PF00004	ATPase family associated with various cellular activities (AAA)
BkAM31D_12365	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
BkAM31D_12365	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BkAM31D_12385	PF01979	Amidohydrolase family
BkAM31D_12405	PF01144	Coenzyme A transferase
BkAM31D_12410	PF01144	Coenzyme A transferase
BkAM31D_12420	PF00202	Aminotransferase class-III
BkAM31D_12425	PF14122	YokU-like protein, putative antitoxin
BkAM31D_12430	PF12544	Lysine-2,3-aminomutase 
BkAM31D_12435	PF00583	Acetyltransferase (GNAT) family
BkAM31D_12440	PF02954	Bacterial regulatory protein, Fis family
BkAM31D_12440	PF13426	PAS domain
BkAM31D_12440	PF00158	Sigma-54 interaction domain
BkAM31D_12445	PF13091	PLD-like domain
BkAM31D_12445	PF13396	Phospholipase_D-nuclease N-terminal
BkAM31D_12450	PF01476	LysM domain
BkAM31D_12450	PF00704	Glycosyl hydrolases family 18
BkAM31D_12460	PF00881	Nitroreductase family
BkAM31D_12485	PF00270	DEAD/DEAH box helicase
BkAM31D_12485	PF00271	Helicase conserved C-terminal domain
BkAM31D_12485	PF16124	RecQ zinc-binding
BkAM31D_12490	PF01895	PhoU domain
BkAM31D_12500	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_12500	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_12500	PF00989	PAS fold
BkAM31D_12510	PF02608	ABC transporter substrate-binding protein PnrA-like
BkAM31D_12515	PF10502	Signal peptidase, peptidase S26 
BkAM31D_12535	PF00005	ABC transporter
BkAM31D_12535	PF13732	Domain of unknown function (DUF4162)
BkAM31D_12550	PF00313	'Cold-shock' DNA-binding domain
BkAM31D_12570	PF12146	Serine aminopeptidase, S33
BkAM31D_12575	PF01679	Proteolipid membrane potential modulator
BkAM31D_12580	PF03471	Transporter associated domain
BkAM31D_12580	PF00571	CBS domain
BkAM31D_12580	PF01595	Cyclin M transmembrane N-terminal domain
BkAM31D_12585	PF02082	Transcriptional regulator
BkAM31D_12600	PF07690	Major Facilitator Superfamily
BkAM31D_12655	PF01593	Flavin containing amine oxidoreductase
BkAM31D_12660	PF01368	DHH family
BkAM31D_12660	PF02833	DHHA2 domain
BkAM31D_12665	PF10011	Predicted membrane protein (DUF2254)
BkAM31D_12675	PF02583	Metal-sensitive transcriptional repressor
BkAM31D_12680	PF00817	impB/mucB/samB family
BkAM31D_12680	PF11799	impB/mucB/samB family C-terminal domain
BkAM31D_12685	PF08863	YolD-like protein
BkAM31D_12690	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BkAM31D_12700	PF00158	Sigma-54 interaction domain
BkAM31D_12720	PF00005	ABC transporter
BkAM31D_12725	PF03641	Possible lysine decarboxylase
BkAM31D_12750	PF04134	Protein of unknown function, DUF393
BkAM31D_12755	PF03473	MOSC domain
BkAM31D_12755	PF03475	3-alpha domain
BkAM31D_12760	PF03372	Endonuclease/Exonuclease/phosphatase family
BkAM31D_12790	PF00324	Amino acid permease
BkAM31D_12795	PF01810	LysE type translocator
BkAM31D_12800	PF09680	Family of unknown function
BkAM31D_12810	PF08439	Oligopeptidase F
BkAM31D_12810	PF01432	Peptidase family M3
BkAM31D_12825	PF00171	Aldehyde dehydrogenase family
BkAM31D_12840	PF01964	Radical SAM ThiC family
BkAM31D_12840	PF13667	ThiC-associated domain 
BkAM31D_12850	PF08000	Bacterial PH domain
BkAM31D_12855	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BkAM31D_12855	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BkAM31D_12875	PF07098	Protein of unknown function (DUF1360)
BkAM31D_12885	PF00293	NUDIX domain
BkAM31D_12885	PF13344	Haloacid dehalogenase-like hydrolase
BkAM31D_12895	PF01925	Sulfite exporter TauE/SafE
BkAM31D_12900	PF01206	Sulfurtransferase TusA
BkAM31D_12905	PF00753	Metallo-beta-lactamase superfamily
BkAM31D_12905	PF00581	Rhodanese-like domain
BkAM31D_12910	PF13686	DsrE/DsrF/DrsH-like family
BkAM31D_12920	PF01206	Sulfurtransferase TusA
BkAM31D_12920	PF00581	Rhodanese-like domain
BkAM31D_12925	PF00581	Rhodanese-like domain
BkAM31D_12935	PF13686	DsrE/DsrF/DrsH-like family
BkAM31D_12940	PF01206	Sulfurtransferase TusA
BkAM31D_12945	PF02583	Metal-sensitive transcriptional repressor
BkAM31D_12970	PF01740	STAS domain
BkAM31D_12970	PF00916	Sulfate permease family
BkAM31D_12975	PF01206	Sulfurtransferase TusA
BkAM31D_12980	PF00753	Metallo-beta-lactamase superfamily
BkAM31D_12980	PF00581	Rhodanese-like domain
BkAM31D_12985	PF13686	DsrE/DsrF/DrsH-like family
BkAM31D_12990	PF01206	Sulfurtransferase TusA
BkAM31D_12990	PF00581	Rhodanese-like domain
BkAM31D_12995	PF13039	Protein of unknown function (DUF3900)
BkAM31D_12995	PF13037	Domain of unknown function (DUF3898)
BkAM31D_13005	PF01066	CDP-alcohol phosphatidyltransferase
BkAM31D_13010	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BkAM31D_13010	PF01411	tRNA synthetases class II (A)
BkAM31D_13010	PF02272	DHHA1 domain
BkAM31D_13020	PF00571	CBS domain
BkAM31D_13025	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BkAM31D_13030	PF07690	Major Facilitator Superfamily
BkAM31D_13035	PF01367	5'-3' exonuclease, C-terminal SAM fold
BkAM31D_13035	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
BkAM31D_13040	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
BkAM31D_13040	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
BkAM31D_13045	PF08241	Methyltransferase domain
BkAM31D_13055	PF02308	MgtC family
BkAM31D_13060	PF00188	Cysteine-rich secretory protein family
BkAM31D_13065	PF13538	UvrD-like helicase C-terminal domain
BkAM31D_13075	PF01738	Dienelactone hydrolase family
BkAM31D_13090	PF01047	MarR family
BkAM31D_13100	PF13307	Helicase C-terminal domain
BkAM31D_13115	PF17334	Minor curli fiber component A
BkAM31D_13120	PF01063	Amino-transferase class IV
BkAM31D_13130	PF00106	short chain dehydrogenase
BkAM31D_13135	PF05504	Spore germination B3/ GerAC like, C-terminal 
BkAM31D_13140	PF03323	Bacillus/Clostridium GerA spore germination protein
BkAM31D_13145	PF03845	Spore germination protein
BkAM31D_13165	PF03323	Bacillus/Clostridium GerA spore germination protein
BkAM31D_13170	PF06094	Gamma-glutamyl cyclotransferase, AIG2-like
BkAM31D_13175	PF01979	Amidohydrolase family
BkAM31D_13185	PF00271	Helicase conserved C-terminal domain
BkAM31D_13185	PF00270	DEAD/DEAH box helicase
BkAM31D_13190	PF01554	MatE
BkAM31D_13215	PF09962	Uncharacterized conserved protein (DUF2196)
BkAM31D_13225	PF00403	Heavy-metal-associated domain
BkAM31D_13230	PF00403	Heavy-metal-associated domain
BkAM31D_13235	PF02583	Metal-sensitive transcriptional repressor
BkAM31D_13245	PF13180	PDZ domain
BkAM31D_13250	PF08830	Protein of unknown function (DUF1806)
BkAM31D_13255	PF02585	GlcNAc-PI de-N-acetylase
BkAM31D_13270	PF02681	Divergent PAP2 family
BkAM31D_13295	PF02645	Uncharacterised protein, DegV family COG1307
BkAM31D_13300	PF00271	Helicase conserved C-terminal domain
BkAM31D_13300	PF09382	RQC domain
BkAM31D_13300	PF00270	DEAD/DEAH box helicase
BkAM31D_13300	PF00570	HRDC domain
BkAM31D_13300	PF16124	RecQ zinc-binding
BkAM31D_13310	PF12848	ABC transporter
BkAM31D_13310	PF00005	ABC transporter
BkAM31D_13320	PF00892	EamA-like transporter family
BkAM31D_13325	PF09335	SNARE associated Golgi protein
BkAM31D_13335	PF02817	e3 binding domain
BkAM31D_13335	PF00364	Biotin-requiring enzyme
BkAM31D_13335	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BkAM31D_13340	PF00676	Dehydrogenase E1 component
BkAM31D_13340	PF16870	2-oxoglutarate dehydrogenase C-terminal
BkAM31D_13340	PF02779	Transketolase, pyrimidine binding domain
BkAM31D_13375	PF01636	Phosphotransferase enzyme family
BkAM31D_13380	PF00534	Glycosyl transferases group 1
BkAM31D_13380	PF13439	Glycosyltransferase Family 4
BkAM31D_13385	PF01370	NAD dependent epimerase/dehydratase family
BkAM31D_13390	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
BkAM31D_13390	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
BkAM31D_13390	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
BkAM31D_13395	PF00483	Nucleotidyl transferase
BkAM31D_13405	PF14489	QueF-like protein
BkAM31D_13410	PF00589	Phage integrase family
BkAM31D_13410	PF13495	Phage integrase, N-terminal SAM-like domain
BkAM31D_13450	PF01580	FtsK/SpoIIIE family
BkAM31D_13450	PF17854	FtsK alpha domain
BkAM31D_13450	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
BkAM31D_13450	PF09397	Ftsk gamma domain
BkAM31D_13565	PF18010	Cry35Ab1 HTH C-terminal domain
BkAM31D_13565	PF00239	Resolvase, N terminal domain
BkAM31D_13680	PF14489	QueF-like protein
BkAM31D_13685	PF04055	Radical SAM superfamily
BkAM31D_13690	PF01242	6-pyruvoyl tetrahydropterin synthase
BkAM31D_13695	PF06508	Queuosine biosynthesis protein QueC
BkAM31D_13700	PF02073	Thermophilic metalloprotease (M29)
BkAM31D_13705	PF07859	alpha/beta hydrolase fold
BkAM31D_13710	PF01625	Peptide methionine sulfoxide reductase
BkAM31D_13715	PF10842	Protein of unknown function (DUF2642)
BkAM31D_13720	PF01521	Iron-sulphur cluster biosynthesis
BkAM31D_13730	PF00072	Response regulator receiver domain
BkAM31D_13730	PF01584	CheW-like domain
BkAM31D_13750	PF00011	Hsp20/alpha crystallin family
BkAM31D_13770	PF00563	EAL domain
BkAM31D_13770	PF10388	EAL-domain associated signalling protein domain
BkAM31D_13775	PF04204	Homoserine O-succinyltransferase 
BkAM31D_13780	PF13456	Reverse transcriptase-like
BkAM31D_13785	PF04461	Protein of unknown function (DUF520)
BkAM31D_13790	PF02811	PHP domain
BkAM31D_13800	PF02540	NAD synthase
BkAM31D_13815	PF03061	Thioesterase superfamily
BkAM31D_13820	PF17866	AAA lid domain
BkAM31D_13820	PF00004	ATPase family associated with various cellular activities (AAA)
BkAM31D_13825	PF00892	EamA-like transporter family
BkAM31D_13840	PF09335	SNARE associated Golgi protein
BkAM31D_13850	PF08177	Small acid-soluble spore protein N family
BkAM31D_13860	PF04239	Protein of unknown function (DUF421)
BkAM31D_13870	PF00330	Aconitase family (aconitate hydratase)
BkAM31D_13870	PF00694	Aconitase C-terminal domain
BkAM31D_13885	PF08179	Small acid-soluble spore protein P family
BkAM31D_13890	PF03061	Thioesterase superfamily
BkAM31D_13905	PF02769	AIR synthase related protein, C-terminal domain
BkAM31D_13905	PF00586	AIR synthase related protein, N-terminal domain
BkAM31D_13915	PF00005	ABC transporter
BkAM31D_13920	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_13935	PF09105	Elongation factor SelB, winged helix 
BkAM31D_13935	PF03144	Elongation factor Tu domain 2
BkAM31D_13935	PF09107	Elongation factor SelB, winged helix 
BkAM31D_13935	PF09106	Elongation factor SelB, winged helix 
BkAM31D_13935	PF00009	Elongation factor Tu GTP binding domain
BkAM31D_13945	PF07969	Amidohydrolase family
BkAM31D_13950	PF01175	Urocanase Rossmann-like domain
BkAM31D_13950	PF17392	Urocanase C-terminal domain
BkAM31D_13950	PF17391	Urocanase N-terminal domain
BkAM31D_13955	PF17391	Urocanase N-terminal domain
BkAM31D_13955	PF17392	Urocanase C-terminal domain
BkAM31D_13955	PF01175	Urocanase Rossmann-like domain
BkAM31D_13960	PF00221	Aromatic amino acid lyase
BkAM31D_13965	PF09021	HutP
BkAM31D_13975	PF02875	Mur ligase family, glutamate ligase domain
BkAM31D_13975	PF01225	Mur ligase family, catalytic domain
BkAM31D_13975	PF08245	Mur ligase middle domain
BkAM31D_13995	PF13472	GDSL-like Lipase/Acylhydrolase family
BkAM31D_14015	PF01520	N-acetylmuramoyl-L-alanine amidase
BkAM31D_14025	PF01758	Sodium Bile acid symporter family
BkAM31D_14035	PF01263	Aldose 1-epimerase
BkAM31D_14050	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BkAM31D_14050	PF00005	ABC transporter
BkAM31D_14055	PF00005	ABC transporter
BkAM31D_14065	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_14085	PF00440	Bacterial regulatory proteins, tetR family
BkAM31D_14085	PF16859	Tetracyclin repressor-like, C-terminal domain
BkAM31D_14090	PF07690	Major Facilitator Superfamily
BkAM31D_14095	PF00082	Subtilase family
BkAM31D_14100	PF00082	Subtilase family
BkAM31D_14105	PF00188	Cysteine-rich secretory protein family
BkAM31D_14110	PF00578	AhpC/TSA family
BkAM31D_14135	PF01053	Cys/Met metabolism PLP-dependent enzyme
BkAM31D_14160	PF12146	Serine aminopeptidase, S33
BkAM31D_14165	PF01569	PAP2 superfamily
BkAM31D_14200	PF11084	Protein of unknown function (DUF2621)
BkAM31D_14205	PF07301	Protein of unknown function (DUF1453)
BkAM31D_14210	PF00005	ABC transporter
BkAM31D_14210	PF00664	ABC transporter transmembrane region
BkAM31D_14215	PF00005	ABC transporter
BkAM31D_14215	PF00664	ABC transporter transmembrane region
BkAM31D_14230	PF00456	Transketolase, thiamine diphosphate binding domain
BkAM31D_14230	PF02779	Transketolase, pyrimidine binding domain
BkAM31D_14230	PF02780	Transketolase, C-terminal domain
BkAM31D_14235	PF05979	Bacterial protein of unknown function (DUF896)
BkAM31D_14240	PF00239	Resolvase, N terminal domain
BkAM31D_14250	PF01726	LexA DNA binding domain
BkAM31D_14250	PF00717	Peptidase S24-like
BkAM31D_14255	PF04688	SPP1 phage holin
BkAM31D_14265	PF00120	Glutamine synthetase, catalytic domain
BkAM31D_14265	PF03951	Glutamine synthetase, beta-Grasp domain
BkAM31D_14270	PF06838	Methionine gamma-lyase 
BkAM31D_14300	PF17209	Hfq protein
BkAM31D_14310	PF04445	Putative SAM-dependent methyltransferase
BkAM31D_14315	PF01119	DNA mismatch repair protein, C-terminal domain
BkAM31D_14315	PF08676	MutL C terminal dimerisation domain
BkAM31D_14320	PF05188	MutS domain II
BkAM31D_14320	PF05192	MutS domain III
BkAM31D_14320	PF01624	MutS domain I
BkAM31D_14320	PF05190	MutS family domain IV
BkAM31D_14320	PF00488	MutS domain V
BkAM31D_14325	PF10628	Outer spore coat protein E (CotE)
BkAM31D_14330	PF06133	Control of competence regulator ComK, YlbF/YmcA
BkAM31D_14335	PF00919	Uncharacterized protein family UPF0004
BkAM31D_14335	PF01938	TRAM domain
BkAM31D_14335	PF04055	Radical SAM superfamily
BkAM31D_14340	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BkAM31D_14355	PF03323	Bacillus/Clostridium GerA spore germination protein
BkAM31D_14375	PF04232	Stage V sporulation protein S (SpoVS)
BkAM31D_14380	PF13277	YmdB-like protein
BkAM31D_14385	PF12072	Domain of unknown function (DUF3552)
BkAM31D_14385	PF00013	KH domain
BkAM31D_14385	PF01966	HD domain
BkAM31D_14400	PF13175	AAA ATPase domain
BkAM31D_14410	PF00154	recA bacterial DNA recombination protein
BkAM31D_14415	PF00271	Helicase conserved C-terminal domain
BkAM31D_14415	PF00270	DEAD/DEAH box helicase
BkAM31D_14420	PF02464	Competence-damaged protein
BkAM31D_14420	PF00994	Probable molybdopterin binding domain
BkAM31D_14420	PF18146	Damage-inducible protein CinA KH domain
BkAM31D_14425	PF01066	CDP-alcohol phosphatidyltransferase
BkAM31D_14430	PF13464	Domain of unknown function (DUF4115)
BkAM31D_14435	PF11868	Protein of unknown function (DUF3388)
BkAM31D_14440	PF11588	Protein of unknown function (DUF3243)
BkAM31D_14450	PF00675	Insulinase (Peptidase family M16)
BkAM31D_14450	PF05193	Peptidase M16 inactive domain
BkAM31D_14455	PF05193	Peptidase M16 inactive domain
BkAM31D_14460	PF07702	UTRA domain
BkAM31D_14460	PF00392	Bacterial regulatory proteins, gntR family
BkAM31D_14465	PF17854	FtsK alpha domain
BkAM31D_14465	PF09397	Ftsk gamma domain
BkAM31D_14465	PF01580	FtsK/SpoIIIE family
BkAM31D_14470	PF14035	YlzJ-like protein
BkAM31D_14475	PF00574	Clp protease
BkAM31D_14490	PF00701	Dihydrodipicolinate synthetase family
BkAM31D_14495	PF00696	Amino acid kinase family
BkAM31D_14495	PF13840	ACT domain 
BkAM31D_14500	PF02774	Semialdehyde dehydrogenase, dimerisation domain
BkAM31D_14500	PF01118	Semialdehyde dehydrogenase, NAD binding domain
BkAM31D_14505	PF02441	Flavoprotein
BkAM31D_14510	PF16924	Dipicolinate synthase subunit A N-terminal domain
BkAM31D_14510	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
BkAM31D_14515	PF05239	PRC-barrel domain
BkAM31D_14520	PF05193	Peptidase M16 inactive domain
BkAM31D_14520	PF00675	Insulinase (Peptidase family M16)
BkAM31D_14535	PF00013	KH domain
BkAM31D_14535	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
BkAM31D_14535	PF01138	3' exoribonuclease family, domain 1
BkAM31D_14535	PF03725	3' exoribonuclease family, domain 2
BkAM31D_14535	PF00575	S1 RNA binding domain
BkAM31D_14540	PF00312	Ribosomal protein S15
BkAM31D_14545	PF06574	FAD synthetase
BkAM31D_14545	PF01687	Riboflavin kinase
BkAM31D_14550	PF16198	tRNA pseudouridylate synthase B C-terminal domain
BkAM31D_14550	PF01509	TruB family pseudouridylate synthase (N terminal domain)
BkAM31D_14555	PF02033	Ribosome-binding factor A
BkAM31D_14565	PF04760	Translation initiation factor IF-2, N-terminal region
BkAM31D_14565	PF00009	Elongation factor Tu GTP binding domain
BkAM31D_14565	PF11987	Translation-initiation factor 2
BkAM31D_14570	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
BkAM31D_14575	PF04296	Protein of unknown function (DUF448)
BkAM31D_14580	PF13184	NusA-like KH domain
BkAM31D_14580	PF08529	NusA N-terminal domain
BkAM31D_14580	PF00575	S1 RNA binding domain
BkAM31D_14585	PF17384	RimP C-terminal SH3 domain
BkAM31D_14585	PF02576	RimP N-terminal domain
BkAM31D_14600	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BkAM31D_14600	PF04073	Aminoacyl-tRNA editing domain
BkAM31D_14600	PF03129	Anticodon binding domain
BkAM31D_14605	PF02163	Peptidase family M50
BkAM31D_14605	PF17820	PDZ domain
BkAM31D_14610	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
BkAM31D_14610	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
BkAM31D_14610	PF13288	DXP reductoisomerase C-terminal domain
BkAM31D_14620	PF01255	Putative undecaprenyl diphosphate synthase
BkAM31D_14625	PF01765	Ribosome recycling factor
BkAM31D_14630	PF00696	Amino acid kinase family
BkAM31D_14635	PF00889	Elongation factor TS
BkAM31D_14640	PF00318	Ribosomal protein S2
BkAM31D_14650	PF04542	Sigma-70 region 2 
BkAM31D_14650	PF04539	Sigma-70 region 3
BkAM31D_14650	PF04545	Sigma-70, region 4
BkAM31D_14655	PF03975	CheD chemotactic sensory transduction
BkAM31D_14660	PF04509	CheC-like family
BkAM31D_14665	PF01339	CheB methylesterase
BkAM31D_14665	PF00072	Response regulator receiver domain
BkAM31D_14670	PF10609	NUBPL iron-transfer P-loop NTPase
BkAM31D_14675	PF00448	SRP54-type protein, GTPase domain
BkAM31D_14680	PF00771	FHIPEP family
BkAM31D_14685	PF01312	FlhB HrpN YscU SpaS Family
BkAM31D_14690	PF01311	Bacterial export proteins, family 1
BkAM31D_14695	PF01313	Bacterial export proteins, family 3
BkAM31D_14700	PF00813	FliP family
BkAM31D_14705	PF04347	Flagellar biosynthesis protein, FliO
BkAM31D_14710	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
BkAM31D_14710	PF04509	CheC-like family
BkAM31D_14715	PF02154	Flagellar motor switch protein FliM
BkAM31D_14715	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
BkAM31D_14725	PF06289	Flagellar and Swarming motility proteins
BkAM31D_14730	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BkAM31D_14730	PF00460	Flagella basal body rod protein
BkAM31D_14740	PF03963	Flagellar hook capping protein - N-terminal region
BkAM31D_14755	PF02050	Flagellar FliJ protein
BkAM31D_14760	PF02874	ATP synthase alpha/beta family, beta-barrel domain
BkAM31D_14760	PF18269	T3SS EscN ATPase C-terminal domain
BkAM31D_14760	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BkAM31D_14770	PF01706	FliG C-terminal domain
BkAM31D_14770	PF14841	FliG middle domain
BkAM31D_14770	PF14842	FliG N-terminal domain
BkAM31D_14775	PF01514	Secretory protein of YscJ/FliF family
BkAM31D_14775	PF08345	Flagellar M-ring protein C-terminal
BkAM31D_14780	PF02049	Flagellar hook-basal body complex protein FliE
BkAM31D_14785	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BkAM31D_14785	PF00460	Flagella basal body rod protein
BkAM31D_14790	PF00460	Flagella basal body rod protein
BkAM31D_14795	PF08222	CodY helix-turn-helix domain
BkAM31D_14795	PF06018	CodY GAF-like domain
BkAM31D_14800	PF00004	ATPase family associated with various cellular activities (AAA)
BkAM31D_14800	PF07724	AAA domain (Cdc48 subfamily)
BkAM31D_14800	PF10431	C-terminal, D2-small domain, of ClpB protein 
BkAM31D_14805	PF00227	Proteasome subunit
BkAM31D_14810	PF02899	Phage integrase, N-terminal SAM-like domain
BkAM31D_14810	PF00589	Phage integrase family
BkAM31D_14815	PF01134	Glucose inhibited division protein A
BkAM31D_14820	PF01751	Toprim domain
BkAM31D_14820	PF01131	DNA topoisomerase
BkAM31D_14820	PF01396	Topoisomerase DNA binding C4 zinc finger
BkAM31D_14825	PF02481	DNA recombination-mediator protein A
BkAM31D_14830	PF02629	CoA binding domain
BkAM31D_14830	PF00549	CoA-ligase
BkAM31D_14835	PF00549	CoA-ligase
BkAM31D_14835	PF08442	ATP-grasp domain
BkAM31D_14845	PF01312	FlhB HrpN YscU SpaS Family
BkAM31D_14855	PF01351	Ribonuclease HII
BkAM31D_14860	PF01926	50S ribosome-binding GTPase
BkAM31D_14865	PF10502	Signal peptidase, peptidase S26 
BkAM31D_14870	PF01245	Ribosomal protein L19
BkAM31D_14880	PF01746	tRNA (Guanine-1)-methyltransferase
BkAM31D_14885	PF01782	RimM N-terminal domain
BkAM31D_14885	PF05239	PRC-barrel domain
BkAM31D_14900	PF00886	Ribosomal protein S16
BkAM31D_14905	PF00448	SRP54-type protein, GTPase domain
BkAM31D_14905	PF02881	SRP54-type protein, helical bundle domain
BkAM31D_14905	PF02978	Signal peptide binding domain
BkAM31D_14910	PF04297	Putative helix-turn-helix protein, YlxM / p13 like
BkAM31D_14915	PF02881	SRP54-type protein, helical bundle domain
BkAM31D_14915	PF00448	SRP54-type protein, GTPase domain
BkAM31D_14920	PF02463	RecF/RecN/SMC N terminal domain
BkAM31D_14920	PF06470	SMC proteins Flexible Hinge Domain
BkAM31D_14925	PF06569	Protein of unknown function (DUF1128)
BkAM31D_14930	PF14622	Ribonuclease-III-like
BkAM31D_14930	PF00035	Double-stranded RNA binding motif
BkAM31D_14935	PF00550	Phosphopantetheine attachment site
BkAM31D_14945	PF00698	Acyl transferase domain
BkAM31D_14950	PF02504	Fatty acid synthesis protein
BkAM31D_14955	PF03061	Thioesterase superfamily
BkAM31D_14960	PF00270	DEAD/DEAH box helicase
BkAM31D_14960	PF00271	Helicase conserved C-terminal domain
BkAM31D_14960	PF17191	RecG wedge domain
BkAM31D_14965	PF03313	Serine dehydratase alpha chain
BkAM31D_14970	PF03315	Serine dehydratase beta chain
BkAM31D_14970	PF01842	ACT domain
BkAM31D_14975	PF02645	Uncharacterised protein, DegV family COG1307
BkAM31D_14980	PF02734	DAK2 domain
BkAM31D_14980	PF13684	Dihydroxyacetone kinase family
BkAM31D_14985	PF03780	Asp23 family, cell envelope-related function
BkAM31D_14990	PF00830	Ribosomal L28 family
BkAM31D_14995	PF00834	Ribulose-phosphate 3 epimerase family
BkAM31D_15000	PF03193	RsgA GTPase
BkAM31D_15000	PF16745	RsgA N-terminal domain
BkAM31D_15005	PF03793	PASTA domain
BkAM31D_15005	PF00069	Protein kinase domain
BkAM31D_15015	PF04055	Radical SAM superfamily
BkAM31D_15020	PF01189	16S rRNA methyltransferase RsmB/F
BkAM31D_15020	PF01029	NusB family
BkAM31D_15025	PF02911	Formyl transferase, C-terminal domain
BkAM31D_15025	PF00551	Formyl transferase
BkAM31D_15030	PF18074	Primosomal protein N C-terminal domain
BkAM31D_15030	PF00271	Helicase conserved C-terminal domain
BkAM31D_15030	PF17764	3′ DNA-binding domain (3′BD)
BkAM31D_15030	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
BkAM31D_15030	PF04851	Type III restriction enzyme, res subunit
BkAM31D_15035	PF04127	DNA / pantothenate metabolism flavoprotein
BkAM31D_15035	PF02441	Flavoprotein
BkAM31D_15040	PF01192	RNA polymerase Rpb6 
BkAM31D_15045	PF00625	Guanylate kinase
BkAM31D_15050	PF04025	Domain of unknown function (DUF370)
BkAM31D_15055	PF03755	YicC-like family, N-terminal region 
BkAM31D_15055	PF08340	Domain of unknown function (DUF1732)
BkAM31D_15075	PF01209	ubiE/COQ5 methyltransferase family
BkAM31D_15080	PF00156	Phosphoribosyl transferase domain
BkAM31D_15085	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
BkAM31D_15090	PF01180	Dihydroorotate dehydrogenase
BkAM31D_15095	PF00970	Oxidoreductase FAD-binding domain
BkAM31D_15095	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
BkAM31D_15100	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BkAM31D_15100	PF02142	MGS-like domain
BkAM31D_15100	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BkAM31D_15105	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
BkAM31D_15105	PF00117	Glutamine amidotransferase class-I
BkAM31D_15110	PF01979	Amidohydrolase family
BkAM31D_15115	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
BkAM31D_15115	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
BkAM31D_15120	PF00860	Permease family
BkAM31D_15130	PF00156	Phosphoribosyl transferase domain
BkAM31D_15140	PF00849	RNA pseudouridylate synthase
BkAM31D_15140	PF01479	S4 domain
BkAM31D_15145	PF01252	Signal peptidase (SPase) II
BkAM31D_15150	PF01258	Prokaryotic dksA/traR C4-type zinc finger
BkAM31D_15155	PF08264	Anticodon-binding domain of tRNA
BkAM31D_15155	PF06827	Zinc finger found in FPG and IleRS
BkAM31D_15155	PF00133	tRNA synthetases class I (I, L, M and V)
BkAM31D_15165	PF05103	DivIVA protein
BkAM31D_15170	PF01479	S4 domain
BkAM31D_15170	PF17774	Putative RNA-binding domain in YlmH
BkAM31D_15175	PF02325	YGGT family
BkAM31D_15180	PF04472	Cell division protein SepF
BkAM31D_15185	PF01168	Alanine racemase, N-terminal domain
BkAM31D_15195	PF05239	PRC-barrel domain
BkAM31D_15200	PF04545	Sigma-70, region 4
BkAM31D_15200	PF04539	Sigma-70 region 3
BkAM31D_15200	PF04542	Sigma-70 region 2 
BkAM31D_15205	PF04545	Sigma-70, region 4
BkAM31D_15205	PF04542	Sigma-70 region 2 
BkAM31D_15210	PF03419	Sporulation factor SpoIIGA 
BkAM31D_15215	PF12327	FtsZ family, C-terminal domain
BkAM31D_15215	PF00091	Tubulin/FtsZ family, GTPase domain
BkAM31D_15220	PF02491	SHS2 domain inserted in FTSA
BkAM31D_15225	PF06947	Protein of unknown function (DUF1290)
BkAM31D_15230	PF05949	Bacterial protein of unknown function (DUF881)
BkAM31D_15235	PF05949	Bacterial protein of unknown function (DUF881)
BkAM31D_15240	PF08478	POTRA domain, FtsQ-type
BkAM31D_15245	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
BkAM31D_15245	PF01565	FAD binding domain 
BkAM31D_15250	PF03033	Glycosyltransferase family 28 N-terminal domain
BkAM31D_15250	PF04101	Glycosyltransferase family 28 C-terminal domain
BkAM31D_15255	PF01098	Cell cycle protein
BkAM31D_15260	PF02875	Mur ligase family, glutamate ligase domain
BkAM31D_15260	PF08245	Mur ligase middle domain
BkAM31D_15265	PF02875	Mur ligase family, glutamate ligase domain
BkAM31D_15265	PF08245	Mur ligase middle domain
BkAM31D_15270	PF00953	Glycosyl transferase family 4
BkAM31D_15270	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
BkAM31D_15275	PF01225	Mur ligase family, catalytic domain
BkAM31D_15275	PF02875	Mur ligase family, glutamate ligase domain
BkAM31D_15275	PF08245	Mur ligase middle domain
BkAM31D_15280	PF03793	PASTA domain
BkAM31D_15280	PF00905	Penicillin binding protein transpeptidase domain
BkAM31D_15280	PF03717	Penicillin-binding Protein dimerisation domain
BkAM31D_15295	PF01795	MraW methylase family
BkAM31D_15300	PF02381	MraZ protein, putative antitoxin-like
BkAM31D_15305	PF10079	Bacillithiol biosynthesis BshC 
BkAM31D_15315	PF08546	Ketopantoate reductase PanE/ApbA C terminal
BkAM31D_15315	PF02558	Ketopantoate reductase PanE/ApbA
BkAM31D_15320	PF00583	Acetyltransferase (GNAT) family
BkAM31D_15330	PF00378	Enoyl-CoA hydratase/isomerase
BkAM31D_15335	PF01783	Ribosomal L32p protein family
BkAM31D_15345	PF05636	HIGH Nucleotidyl Transferase
BkAM31D_15350	PF05362	Lon protease (S16) C-terminal proteolytic domain
BkAM31D_15350	PF13180	PDZ domain
BkAM31D_15355	PF01734	Patatin-like phospholipase
BkAM31D_15360	PF07670	Nucleoside recognition
BkAM31D_15365	PF01467	Cytidylyltransferase-like
BkAM31D_15370	PF01467	Cytidylyltransferase-like
BkAM31D_15395	PF07690	Major Facilitator Superfamily
BkAM31D_15400	PF09902	Uncharacterized protein conserved in bacteria (DUF2129)
BkAM31D_15410	PF06133	Control of competence regulator ComK, YlbF/YmcA
BkAM31D_15415	PF03851	UV-endonuclease UvdE
BkAM31D_15435	PF14071	Putative coat protein
BkAM31D_15445	PF14504	CAP-associated N-terminal
BkAM31D_15445	PF00188	Cysteine-rich secretory protein family
BkAM31D_15450	PF08868	YugN-like family
BkAM31D_15465	PF13115	YtkA-like
BkAM31D_15470	PF00672	HAMP domain
BkAM31D_15470	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_15470	PF13426	PAS domain
BkAM31D_15470	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_15475	PF00486	Transcriptional regulatory protein, C terminal
BkAM31D_15475	PF00072	Response regulator receiver domain
BkAM31D_15520	PF00289	Biotin carboxylase, N-terminal domain
BkAM31D_15520	PF00682	HMGL-like
BkAM31D_15520	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BkAM31D_15520	PF00364	Biotin-requiring enzyme
BkAM31D_15520	PF02785	Biotin carboxylase C-terminal domain
BkAM31D_15520	PF02436	Conserved carboxylase domain
BkAM31D_15525	PF07408	Protein of unknown function (DUF1507)
BkAM31D_15530	PF04960	Glutaminase
BkAM31D_15540	PF13638	PIN domain
BkAM31D_15540	PF02562	PhoH-like protein
BkAM31D_15550	PF09963	Uncharacterized protein conserved in bacteria (DUF2197)
BkAM31D_15555	PF14036	YlaH-like protein
BkAM31D_15570	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
BkAM31D_15570	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BkAM31D_15575	PF00459	Inositol monophosphatase family
BkAM31D_15585	PF06335	Protein of unknown function (DUF1054)
BkAM31D_15590	PF05256	Uncharacterised protein family (UPF0223)
BkAM31D_15595	PF03060	Nitronate monooxygenase
BkAM31D_15600	PF03060	Nitronate monooxygenase
BkAM31D_15605	PF01276	Orn/Lys/Arg decarboxylase, major domain
BkAM31D_15605	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
BkAM31D_15630	PF06081	Aromatic acid exporter family member 1
BkAM31D_15635	PF02028	BCCT, betaine/carnitine/choline family transporter
BkAM31D_15650	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BkAM31D_15650	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BkAM31D_15655	PF00364	Biotin-requiring enzyme
BkAM31D_15655	PF02817	e3 binding domain
BkAM31D_15655	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BkAM31D_15660	PF02780	Transketolase, C-terminal domain
BkAM31D_15660	PF02779	Transketolase, pyrimidine binding domain
BkAM31D_15665	PF00676	Dehydrogenase E1 component
BkAM31D_15685	PF01327	Polypeptide deformylase
BkAM31D_15695	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
BkAM31D_15695	PF00753	Metallo-beta-lactamase superfamily
BkAM31D_15695	PF17770	Ribonuclease J C-terminal domain
BkAM31D_15710	PF00578	AhpC/TSA family
BkAM31D_15715	PF00578	AhpC/TSA family
BkAM31D_15715	PF10417	C-terminal domain of 1-Cys peroxiredoxin
BkAM31D_15720	PF00924	Mechanosensitive ion channel
BkAM31D_15725	PF03698	Uncharacterised protein family (UPF0180)
BkAM31D_15730	PF07687	Peptidase dimerisation domain
BkAM31D_15730	PF01546	Peptidase family M20/M25/M40
BkAM31D_15735	PF00202	Aminotransferase class-III
BkAM31D_15740	PF08503	Tetrahydrodipicolinate succinyltransferase N-terminal
BkAM31D_15740	PF00132	Bacterial transferase hexapeptide (six repeats)
BkAM31D_15740	PF14602	Hexapeptide repeat of succinyl-transferase
BkAM31D_15745	PF03547	Membrane transport protein
BkAM31D_15750	PF00463	Isocitrate lyase family
BkAM31D_15760	PF02028	BCCT, betaine/carnitine/choline family transporter
BkAM31D_15765	PF00924	Mechanosensitive ion channel
BkAM31D_15780	PF13217	Protein of unknown function (DUF4025)
BkAM31D_15785	PF02735	Ku70/Ku80 beta-barrel domain
BkAM31D_15790	PF01068	ATP dependent DNA ligase domain
BkAM31D_15795	PF00881	Nitroreductase family
BkAM31D_15800	PF04346	Ethanolamine utilisation protein, EutH
BkAM31D_15805	PF01048	Phosphorylase superfamily
BkAM31D_15810	PF00682	HMGL-like
BkAM31D_15815	PF02515	CoA-transferase family III
BkAM31D_15820	PF07729	FCD domain
BkAM31D_15820	PF00392	Bacterial regulatory proteins, gntR family
BkAM31D_15825	PF01487	Type I 3-dehydroquinase
BkAM31D_15830	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BkAM31D_15830	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BkAM31D_15830	PF00205	Thiamine pyrophosphate enzyme, central domain
BkAM31D_15835	PF08240	Alcohol dehydrogenase GroES-like domain
BkAM31D_15835	PF00107	Zinc-binding dehydrogenase
BkAM31D_15840	PF00171	Aldehyde dehydrogenase family
BkAM31D_15845	PF01202	Shikimate kinase
BkAM31D_15870	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
BkAM31D_15875	PF03480	Bacterial extracellular solute-binding protein, family 7
BkAM31D_15880	PF00381	PTS HPr component phosphorylation site
BkAM31D_15895	PF13556	PucR C-terminal helix-turn-helix domain
BkAM31D_15900	PF03459	TOBE domain
BkAM31D_15900	PF00005	ABC transporter
BkAM31D_15900	PF17912	MalK OB fold domain
BkAM31D_15905	PF01274	Malate synthase
BkAM31D_15910	PF09339	IclR helix-turn-helix domain
BkAM31D_15910	PF01614	Bacterial transcriptional regulator
BkAM31D_15920	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BkAM31D_15920	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BkAM31D_15925	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BkAM31D_15925	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BkAM31D_15935	PF00356	Bacterial regulatory proteins, lacI family
BkAM31D_15940	PF12833	Helix-turn-helix domain
BkAM31D_15940	PF00072	Response regulator receiver domain
BkAM31D_15945	PF02743	Cache domain
BkAM31D_15945	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_15945	PF06580	Histidine kinase
BkAM31D_15945	PF00672	HAMP domain
BkAM31D_15950	PF01547	Bacterial extracellular solute-binding protein
BkAM31D_15955	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_15960	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_15975	PF00128	Alpha amylase, catalytic domain
BkAM31D_15975	PF16657	Maltogenic Amylase, C-terminal domain
BkAM31D_15980	PF00356	Bacterial regulatory proteins, lacI family
BkAM31D_15980	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
BkAM31D_15985	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_15990	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_15995	PF13416	Bacterial extracellular solute-binding protein
BkAM31D_16000	PF01554	MatE
BkAM31D_16005	PF00082	Subtilase family
BkAM31D_16030	PF00188	Cysteine-rich secretory protein family
BkAM31D_16035	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus
BkAM31D_16035	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
BkAM31D_16040	PF00565	Staphylococcal nuclease homologue
BkAM31D_16055	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BkAM31D_16055	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BkAM31D_16060	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BkAM31D_16060	PF00005	ABC transporter
BkAM31D_16065	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BkAM31D_16065	PF00005	ABC transporter
BkAM31D_16070	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_16085	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BkAM31D_16090	PF01116	Fructose-bisphosphate aldolase class-II
BkAM31D_16095	PF02780	Transketolase, C-terminal domain
BkAM31D_16095	PF00456	Transketolase, thiamine diphosphate binding domain
BkAM31D_16095	PF02779	Transketolase, pyrimidine binding domain
BkAM31D_16100	PF00365	Phosphofructokinase
BkAM31D_16115	PF01969	Protein of unknown function DUF111
BkAM31D_16120	PF00731	AIR carboxylase
BkAM31D_16125	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BkAM31D_16125	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BkAM31D_16130	PF02540	NAD synthase
BkAM31D_16135	PF00106	short chain dehydrogenase
BkAM31D_16145	PF02614	Glucuronate isomerase
BkAM31D_16150	PF00480	ROK family
BkAM31D_16155	PF00589	Phage integrase family
BkAM31D_16160	PF03471	Transporter associated domain
BkAM31D_16160	PF00999	Sodium/hydrogen exchanger family
BkAM31D_16160	PF02080	TrkA-C domain
BkAM31D_16165	PF13426	PAS domain
BkAM31D_16165	PF00989	PAS fold
BkAM31D_16165	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_16165	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_16165	PF13188	PAS domain
BkAM31D_16170	PF03705	CheR methyltransferase, all-alpha domain
BkAM31D_16170	PF01739	CheR methyltransferase, SAM binding domain
BkAM31D_16175	PF00072	Response regulator receiver domain
BkAM31D_16175	PF09308	LuxQ, periplasmic
BkAM31D_16175	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_16175	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_16185	PF01261	Xylose isomerase-like TIM barrel
BkAM31D_16190	PF02492	CobW/HypB/UreG, nucleotide-binding domain
BkAM31D_16190	PF07683	Cobalamin synthesis protein cobW C-terminal domain
BkAM31D_16195	PF07875	Coat F domain
BkAM31D_16210	PF07875	Coat F domain
BkAM31D_16215	PF08240	Alcohol dehydrogenase GroES-like domain
BkAM31D_16215	PF13823	Alcohol dehydrogenase GroES-associated
BkAM31D_16215	PF00107	Zinc-binding dehydrogenase
BkAM31D_16225	PF07486	Cell Wall Hydrolase
BkAM31D_16235	PF01261	Xylose isomerase-like TIM barrel
BkAM31D_16240	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BkAM31D_16240	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BkAM31D_16245	PF02653	Branched-chain amino acid transport system / permease component
BkAM31D_16250	PF00005	ABC transporter
BkAM31D_16255	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BkAM31D_16255	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BkAM31D_16270	PF00356	Bacterial regulatory proteins, lacI family
BkAM31D_16280	PF00072	Response regulator receiver domain
BkAM31D_16280	PF04397	LytTr DNA-binding domain
BkAM31D_16285	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_16285	PF09308	LuxQ, periplasmic
BkAM31D_16285	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_16285	PF00072	Response regulator receiver domain
BkAM31D_16305	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BkAM31D_16305	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
BkAM31D_16310	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
BkAM31D_16310	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
BkAM31D_16315	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
BkAM31D_16320	PF01380	SIS domain
BkAM31D_16325	PF00106	short chain dehydrogenase
BkAM31D_16330	PF00248	Aldo/keto reductase family
BkAM31D_16340	PF01638	HxlR-like helix-turn-helix
BkAM31D_16345	PF00155	Aminotransferase class I and II
BkAM31D_16345	PF00392	Bacterial regulatory proteins, gntR family
BkAM31D_16355	PF00296	Luciferase-like monooxygenase
BkAM31D_16365	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
BkAM31D_16365	PF01348	Type II intron maturase
BkAM31D_16385	PF00158	Sigma-54 interaction domain
BkAM31D_16385	PF13426	PAS domain
BkAM31D_16385	PF02954	Bacterial regulatory protein, Fis family
BkAM31D_16390	PF07486	Cell Wall Hydrolase
BkAM31D_16395	PF03323	Bacillus/Clostridium GerA spore germination protein
BkAM31D_16410	PF02803	Thiolase, C-terminal domain
BkAM31D_16410	PF00108	Thiolase, N-terminal domain
BkAM31D_16415	PF01144	Coenzyme A transferase
BkAM31D_16420	PF01144	Coenzyme A transferase
BkAM31D_16425	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
BkAM31D_16425	PF13378	Enolase C-terminal domain-like
BkAM31D_16435	PF00004	ATPase family associated with various cellular activities (AAA)
BkAM31D_16435	PF07724	AAA domain (Cdc48 subfamily)
BkAM31D_16435	PF10431	C-terminal, D2-small domain, of ClpB protein 
BkAM31D_16435	PF17871	AAA lid domain
BkAM31D_16440	PF03471	Transporter associated domain
BkAM31D_16440	PF01595	Cyclin M transmembrane N-terminal domain
BkAM31D_16440	PF00571	CBS domain
BkAM31D_16455	PF03471	Transporter associated domain
BkAM31D_16455	PF00571	CBS domain
BkAM31D_16455	PF01595	Cyclin M transmembrane N-terminal domain
BkAM31D_16475	PF13188	PAS domain
BkAM31D_16475	PF00989	PAS fold
BkAM31D_16475	PF13426	PAS domain
BkAM31D_16475	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_16475	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_16480	PF00990	Diguanylate cyclase, GGDEF domain
BkAM31D_16480	PF00563	EAL domain
BkAM31D_16480	PF03707	Bacterial signalling protein N terminal repeat
BkAM31D_16505	PF00589	Phage integrase family
BkAM31D_16525	PF09560	Sporulation protein YunB (Spo_YunB)
BkAM31D_16545	PF03050	Transposase IS66 family 
BkAM31D_16545	PF13817	IS66 C-terminal element
BkAM31D_16545	PF13007	Transposase C of IS166 homeodomain
BkAM31D_16545	PF13005	zinc-finger binding domain of transposase IS66 
BkAM31D_16570	PF01895	PhoU domain
BkAM31D_16575	PF01699	Sodium/calcium exchanger protein
BkAM31D_16595	PF03334	Na+/H+ antiporter subunit
BkAM31D_16600	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
BkAM31D_16605	PF01899	Na+/H+ ion antiporter subunit
BkAM31D_16610	PF00361	Proton-conducting membrane transporter
BkAM31D_16640	PF02080	TrkA-C domain
BkAM31D_16640	PF03471	Transporter associated domain
BkAM31D_16640	PF00999	Sodium/hydrogen exchanger family
BkAM31D_16645	PF00589	Phage integrase family
BkAM31D_16650	PF05504	Spore germination B3/ GerAC like, C-terminal 
BkAM31D_16660	PF13408	Recombinase zinc beta ribbon domain
BkAM31D_16660	PF07508	Recombinase
BkAM31D_16660	PF00239	Resolvase, N terminal domain
BkAM31D_16695	PF00589	Phage integrase family
BkAM31D_16695	PF02899	Phage integrase, N-terminal SAM-like domain
BkAM31D_16705	PF07454	Stage II sporulation protein P (SpoIIP)
BkAM31D_16740	PF01026	TatD related DNase
BkAM31D_16745	PF02899	Phage integrase, N-terminal SAM-like domain
BkAM31D_16745	PF00589	Phage integrase family
BkAM31D_16765	PF06491	Disulphide isomerase
BkAM31D_16770	PF09223	ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
BkAM31D_16770	PF01297	Zinc-uptake complex component A periplasmic
BkAM31D_16780	PF02817	e3 binding domain
BkAM31D_16780	PF00364	Biotin-requiring enzyme
BkAM31D_16780	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BkAM31D_16785	PF02779	Transketolase, pyrimidine binding domain
BkAM31D_16785	PF02780	Transketolase, C-terminal domain
BkAM31D_16790	PF00676	Dehydrogenase E1 component
BkAM31D_16795	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BkAM31D_16795	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BkAM31D_16800	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BkAM31D_16800	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
BkAM31D_16805	PF00989	PAS fold
BkAM31D_16805	PF00158	Sigma-54 interaction domain
BkAM31D_16805	PF02954	Bacterial regulatory protein, Fis family
BkAM31D_16820	PF00535	Glycosyl transferase family 2
BkAM31D_16830	PF00072	Response regulator receiver domain
BkAM31D_16830	PF08769	Sporulation initiation factor Spo0A C terminal
BkAM31D_16835	PF17820	PDZ domain
BkAM31D_16835	PF05580	SpoIVB peptidase S55
BkAM31D_16840	PF02463	RecF/RecN/SMC N terminal domain
BkAM31D_16845	PF02863	Arginine repressor, C-terminal domain
BkAM31D_16845	PF01316	Arginine repressor, DNA binding domain
BkAM31D_16850	PF01728	FtsJ-like methyltransferase
BkAM31D_16850	PF01479	S4 domain
BkAM31D_16855	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
BkAM31D_16855	PF02780	Transketolase, C-terminal domain
BkAM31D_16855	PF02779	Transketolase, pyrimidine binding domain
BkAM31D_16870	PF00348	Polyprenyl synthetase
BkAM31D_16875	PF02609	Exonuclease VII small subunit
BkAM31D_16880	PF13742	OB-fold nucleic acid binding domain
BkAM31D_16880	PF02601	Exonuclease VII, large subunit
BkAM31D_16885	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
BkAM31D_16885	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
BkAM31D_16890	PF01029	NusB family
BkAM31D_16895	PF03780	Asp23 family, cell envelope-related function
BkAM31D_16900	PF02785	Biotin carboxylase C-terminal domain
BkAM31D_16900	PF00289	Biotin carboxylase, N-terminal domain
BkAM31D_16900	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BkAM31D_16905	PF00364	Biotin-requiring enzyme
BkAM31D_16915	PF12685	SpoIIIAH-like protein
BkAM31D_16925	PF09581	Stage III sporulation protein AF (Spore_III_AF)
BkAM31D_16930	PF09546	Stage III sporulation protein AE (spore_III_AE)
BkAM31D_16935	PF06686	Stage III sporulation protein AC/AD protein family
BkAM31D_16940	PF06686	Stage III sporulation protein AC/AD protein family
BkAM31D_16945	PF09548	Stage III sporulation protein AB (spore_III_AB)
BkAM31D_16955	PF10942	Protein of unknown function (DUF2619)
BkAM31D_16960	PF01132	Elongation factor P (EF-P) OB domain
BkAM31D_16960	PF08207	Elongation factor P (EF-P) KOW-like domain
BkAM31D_16960	PF09285	Elongation factor P, C-terminal
BkAM31D_16965	PF00557	Metallopeptidase family M24
BkAM31D_16965	PF01321	Creatinase/Prolidase N-terminal domain
BkAM31D_16970	PF11085	Conserved membrane protein YqhR
BkAM31D_16980	PF01734	Patatin-like phospholipase
BkAM31D_16985	PF02742	Iron dependent repressor, metal binding and dimerisation domain
BkAM31D_16985	PF01325	Iron dependent repressor, N-terminal DNA binding domain
BkAM31D_16995	PF03477	ATP cone domain
BkAM31D_16995	PF02867	Ribonucleotide reductase, barrel domain
BkAM31D_16995	PF00317	Ribonucleotide reductase, all-alpha domain
BkAM31D_17000	PF01063	Amino-transferase class IV
BkAM31D_17015	PF00581	Rhodanese-like domain
BkAM31D_17020	PF02347	Glycine cleavage system P-protein
BkAM31D_17025	PF02347	Glycine cleavage system P-protein
BkAM31D_17030	PF01571	Aminomethyltransferase folate-binding domain
BkAM31D_17030	PF08669	Glycine cleavage T-protein C-terminal barrel domain
BkAM31D_17040	PF00271	Helicase conserved C-terminal domain
BkAM31D_17040	PF00176	SNF2 family N-terminal domain
BkAM31D_17045	PF11079	Bacterial protein YqhG of unknown function
BkAM31D_17055	PF00753	Metallo-beta-lactamase superfamily
BkAM31D_17060	PF11117	Protein of unknown function (DUF2626)
BkAM31D_17095	PF07963	Prokaryotic N-terminal methylation motif
BkAM31D_17100	PF01809	Putative membrane protein insertion efficiency factor
BkAM31D_17200	PF00482	Type II secretion system (T2SS), protein F
BkAM31D_17210	PF00437	Type II/IV secretion system protein
BkAM31D_17220	PF01741	Large-conductance mechanosensitive channel, MscL
BkAM31D_17235	PF13361	UvrD-like helicase C-terminal domain
BkAM31D_17235	PF00580	UvrD/REP helicase N-terminal domain
BkAM31D_17240	PF01966	HD domain
BkAM31D_17265	PF00999	Sodium/hydrogen exchanger family
BkAM31D_17265	PF00582	Universal stress protein family
BkAM31D_17270	PF00149	Calcineurin-like phosphoesterase
BkAM31D_17280	PF00849	RNA pseudouridylate synthase
BkAM31D_17285	PF01513	ATP-NAD kinase
BkAM31D_17290	PF04607	Region found in RelA / SpoT proteins
BkAM31D_17305	PF01464	Transglycosylase SLT domain
BkAM31D_17310	PF01152	Bacterial-like globin
BkAM31D_17320	PF01432	Peptidase family M3
BkAM31D_17320	PF08439	Oligopeptidase F
BkAM31D_17325	PF06054	Competence protein CoiA-like family
BkAM31D_17340	PF03741	Integral membrane protein TerC family
BkAM31D_17345	PF03960	ArsC family
BkAM31D_17355	PF13508	Acetyltransferase (GNAT) domain
BkAM31D_17365	PF12728	Helix-turn-helix domain
BkAM31D_17370	PF03006	Haemolysin-III related
BkAM31D_17375	PF01966	HD domain
BkAM31D_17385	PF01699	Sodium/calcium exchanger protein
BkAM31D_17390	PF00578	AhpC/TSA family
BkAM31D_17410	PF00107	Zinc-binding dehydrogenase
BkAM31D_17410	PF08240	Alcohol dehydrogenase GroES-like domain
BkAM31D_17445	PF12227	Protein of unknown function (DUF3603)
BkAM31D_17455	PF10026	Predicted Zn-dependent protease (DUF2268)
BkAM31D_17475	PF00485	Phosphoribulokinase / Uridine kinase family
BkAM31D_17480	PF07486	Cell Wall Hydrolase
BkAM31D_17495	PF13735	tRNA nucleotidyltransferase domain 2 putative
BkAM31D_17495	PF12627	Probable RNA and SrmB- binding site of polymerase A
BkAM31D_17495	PF01743	Poly A polymerase head domain
BkAM31D_17500	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
BkAM31D_17500	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
BkAM31D_17505	PF03816	Cell envelope-related transcriptional attenuator domain
BkAM31D_17510	PF02801	Beta-ketoacyl synthase, C-terminal domain
BkAM31D_17510	PF00109	Beta-ketoacyl synthase, N-terminal domain
BkAM31D_17515	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
BkAM31D_17515	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
BkAM31D_17535	PF02608	ABC transporter substrate-binding protein PnrA-like
BkAM31D_17540	PF00009	Elongation factor Tu GTP binding domain
BkAM31D_17540	PF03144	Elongation factor Tu domain 2
BkAM31D_17540	PF16658	Class II release factor RF3, C-terminal domain
BkAM31D_17550	PF01370	NAD dependent epimerase/dehydratase family
BkAM31D_17560	PF14168	YjzC-like protein
BkAM31D_17565	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
BkAM31D_17565	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
BkAM31D_17570	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BkAM31D_17570	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BkAM31D_17575	PF00117	Glutamine amidotransferase class-I
BkAM31D_17575	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
BkAM31D_17590	PF00696	Amino acid kinase family
BkAM31D_17595	PF01960	ArgJ family
BkAM31D_17600	PF02774	Semialdehyde dehydrogenase, dimerisation domain
BkAM31D_17600	PF01118	Semialdehyde dehydrogenase, NAD binding domain
BkAM31D_17615	PF02630	SCO1/SenC
BkAM31D_17620	PF09678	Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
BkAM31D_17650	PF03591	AzlC protein
BkAM31D_17665	PF00176	SNF2 family N-terminal domain
BkAM31D_17665	PF12419	SNF2 Helicase protein 
BkAM31D_17665	PF00271	Helicase conserved C-terminal domain
BkAM31D_17675	PF12690	Intracellular proteinase inhibitor
BkAM31D_17680	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BkAM31D_17680	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BkAM31D_17685	PF00326	Prolyl oligopeptidase family
BkAM31D_17700	PF01206	Sulfurtransferase TusA
BkAM31D_17700	PF00581	Rhodanese-like domain
BkAM31D_17705	PF01594	AI-2E family transporter
BkAM31D_17725	PF01642	Methylmalonyl-CoA mutase
BkAM31D_17725	PF02310	B12 binding domain
BkAM31D_17730	PF01642	Methylmalonyl-CoA mutase
BkAM31D_17735	PF01039	Carboxyl transferase domain
BkAM31D_17740	PF00440	Bacterial regulatory proteins, tetR family
BkAM31D_17740	PF08359	YsiA-like protein, C-terminal region
BkAM31D_17755	PF02254	TrkA-N domain
BkAM31D_17755	PF02080	TrkA-C domain
BkAM31D_17760	PF00072	Response regulator receiver domain
BkAM31D_17765	PF01584	CheW-like domain
BkAM31D_17770	PF07194	P2 response regulator binding domain
BkAM31D_17770	PF01627	Hpt domain
BkAM31D_17770	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_17770	PF02895	Signal transducing histidine kinase, homodimeric domain
BkAM31D_17770	PF01584	CheW-like domain
BkAM31D_17775	PF03707	Bacterial signalling protein N terminal repeat
BkAM31D_17775	PF00563	EAL domain
BkAM31D_17775	PF00990	Diguanylate cyclase, GGDEF domain
BkAM31D_17780	PF12705	PD-(D/E)XK nuclease superfamily
BkAM31D_17780	PF00580	UvrD/REP helicase N-terminal domain
BkAM31D_17780	PF13361	UvrD-like helicase C-terminal domain
BkAM31D_17785	PF12705	PD-(D/E)XK nuclease superfamily
BkAM31D_17790	PF13673	Acetyltransferase (GNAT) domain
BkAM31D_17795	PF03241	4-hydroxyphenylacetate 3-hydroxylase C terminal
BkAM31D_17795	PF11794	4-hydroxyphenylacetate 3-hydroxylase N terminal
BkAM31D_17800	PF07457	Protein of unknown function (DUF1516)
BkAM31D_17810	PF00902	Sec-independent protein translocase protein (TatC)
BkAM31D_17815	PF02416	mttA/Hcf106 family
BkAM31D_17835	PF01895	PhoU domain
BkAM31D_17840	PF00005	ABC transporter
BkAM31D_17845	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_17850	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_17855	PF12849	PBP superfamily domain
BkAM31D_17865	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_17865	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_17865	PF00989	PAS fold
BkAM31D_17865	PF08447	PAS fold
BkAM31D_17880	PF13732	Domain of unknown function (DUF4162)
BkAM31D_17880	PF00005	ABC transporter
BkAM31D_17895	PF13536	Putative multidrug resistance efflux transporter
BkAM31D_17905	PF02416	mttA/Hcf106 family
BkAM31D_17920	PF00582	Universal stress protein family
BkAM31D_17925	PF01740	STAS domain
BkAM31D_17925	PF00916	Sulfate permease family
BkAM31D_17930	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BkAM31D_17940	PF02374	Anion-transporting ATPase
BkAM31D_17945	PF06953	Arsenical resistance operon trans-acting repressor ArsD
BkAM31D_17950	PF01451	Low molecular weight phosphotyrosine protein phosphatase
BkAM31D_17955	PF02040	Arsenical pump membrane protein
BkAM31D_17960	PF01022	Bacterial regulatory protein, arsR family
BkAM31D_17965	PF12706	Beta-lactamase superfamily domain
BkAM31D_17975	PF01016	Ribosomal L27 protein
BkAM31D_17980	PF04327	Cysteine protease Prp
BkAM31D_17985	PF00829	Ribosomal prokaryotic L21 protein
BkAM31D_17995	PF00575	S1 RNA binding domain
BkAM31D_17995	PF10150	Ribonuclease E/G family
BkAM31D_18000	PF02163	Peptidase family M50
BkAM31D_18005	PF01551	Peptidase family M23
BkAM31D_18010	PF00248	Aldo/keto reductase family
BkAM31D_18015	PF00994	Probable molybdopterin binding domain
BkAM31D_18020	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
BkAM31D_18025	PF03775	Septum formation inhibitor MinC, C-terminal domain
BkAM31D_18045	PF04002	RadC-like JAB domain
BkAM31D_18050	PF02545	Maf-like protein
BkAM31D_18060	PF00482	Type II secretion system (T2SS), protein F
BkAM31D_18065	PF00437	Type II/IV secretion system protein
BkAM31D_18070	PF00437	Type II/IV secretion system protein
BkAM31D_18110	PF01478	Type IV leader peptidase family
BkAM31D_18110	PF06750	Bacterial Peptidase A24 N-terminal domain
BkAM31D_18115	PF07963	Prokaryotic N-terminal methylation motif
BkAM31D_18115	PF08334	Type II secretion system (T2SS), protein G
BkAM31D_18125	PF02875	Mur ligase family, glutamate ligase domain
BkAM31D_18125	PF08245	Mur ligase middle domain
BkAM31D_18140	PF04542	Sigma-70 region 2 
BkAM31D_18140	PF08281	Sigma-70, region 4
BkAM31D_18145	PF02469	Fasciclin domain
BkAM31D_18180	PF01476	LysM domain
BkAM31D_18185	PF00202	Aminotransferase class-III
BkAM31D_18190	PF00490	Delta-aminolevulinic acid dehydratase
BkAM31D_18195	PF02602	Uroporphyrinogen-III synthase HemD
BkAM31D_18200	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
BkAM31D_18200	PF03900	Porphobilinogen deaminase, C-terminal domain
BkAM31D_18205	PF01578	Cytochrome C assembly protein
BkAM31D_18210	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
BkAM31D_18210	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
BkAM31D_18210	PF01488	Shikimate / quinate 5-dehydrogenase
BkAM31D_18220	PF01926	50S ribosome-binding GTPase
BkAM31D_18235	PF05362	Lon protease (S16) C-terminal proteolytic domain
BkAM31D_18235	PF00004	ATPase family associated with various cellular activities (AAA)
BkAM31D_18240	PF10431	C-terminal, D2-small domain, of ClpB protein 
BkAM31D_18240	PF06689	ClpX C4-type zinc finger
BkAM31D_18240	PF07724	AAA domain (Cdc48 subfamily)
BkAM31D_18245	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
BkAM31D_18245	PF05698	Bacterial trigger factor protein (TF) C-terminus
BkAM31D_18245	PF05697	Bacterial trigger factor protein (TF)
BkAM31D_18260	PF00694	Aconitase C-terminal domain
BkAM31D_18265	PF00330	Aconitase family (aconitate hydratase)
BkAM31D_18270	PF00180	Isocitrate/isopropylmalate dehydrogenase
BkAM31D_18275	PF00682	HMGL-like
BkAM31D_18275	PF08502	LeuA allosteric (dimerisation) domain
BkAM31D_18280	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
BkAM31D_18280	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
BkAM31D_18285	PF01842	ACT domain
BkAM31D_18285	PF10369	Small subunit of acetolactate synthase
BkAM31D_18290	PF00205	Thiamine pyrophosphate enzyme, central domain
BkAM31D_18290	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BkAM31D_18290	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BkAM31D_18300	PF00920	Dehydratase family
BkAM31D_18305	PF01063	Amino-transferase class IV
BkAM31D_18325	PF12850	Calcineurin-like phosphoesterase superfamily domain
BkAM31D_18330	PF01725	Ham1 family
BkAM31D_18335	PF01138	3' exoribonuclease family, domain 1
BkAM31D_18335	PF03725	3' exoribonuclease family, domain 2
BkAM31D_18340	PF10646	Sporulation and spore germination
BkAM31D_18345	PF01177	Asp/Glu/Hydantoin racemase
BkAM31D_18350	PF01047	MarR family
BkAM31D_18355	PF02896	PEP-utilising enzyme, TIM barrel domain
BkAM31D_18355	PF05524	PEP-utilising enzyme, N-terminal
BkAM31D_18355	PF00391	PEP-utilising enzyme, mobile domain
BkAM31D_18360	PF00381	PTS HPr component phosphorylation site
BkAM31D_18365	PF00196	Bacterial regulatory proteins, luxR family
BkAM31D_18375	PF13183	4Fe-4S dicluster domain
BkAM31D_18375	PF13085	2Fe-2S iron-sulfur cluster binding domain
BkAM31D_18380	PF00890	FAD binding domain
BkAM31D_18380	PF02910	Fumarate reductase flavoprotein C-term
BkAM31D_18385	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
BkAM31D_18390	PF02386	Cation transport protein
BkAM31D_18395	PF10702	Protein of unknown function (DUF2507)
BkAM31D_18400	PF00696	Amino acid kinase family
BkAM31D_18400	PF13840	ACT domain 
BkAM31D_18410	PF01541	GIY-YIG catalytic domain
BkAM31D_18410	PF08459	UvrC Helix-hairpin-helix N-terminal
BkAM31D_18410	PF02151	UvrB/uvrC motif
BkAM31D_18415	PF00085	Thioredoxin
BkAM31D_18420	PF01012	Electron transfer flavoprotein domain
BkAM31D_18420	PF00766	Electron transfer flavoprotein FAD-binding domain
BkAM31D_18425	PF01012	Electron transfer flavoprotein domain
BkAM31D_18430	PF00378	Enoyl-CoA hydratase/isomerase
BkAM31D_18435	PF08359	YsiA-like protein, C-terminal region
BkAM31D_18435	PF00440	Bacterial regulatory proteins, tetR family
BkAM31D_18440	PF13193	AMP-binding enzyme C-terminal domain
BkAM31D_18440	PF00501	AMP-binding enzyme
BkAM31D_18450	PF13193	AMP-binding enzyme C-terminal domain
BkAM31D_18450	PF00501	AMP-binding enzyme
BkAM31D_18455	PF03994	Domain of Unknown Function (DUF350) 
BkAM31D_18460	PF00488	MutS domain V
BkAM31D_18460	PF01713	Smr domain
BkAM31D_18475	PF02674	Colicin V production protein
BkAM31D_18480	PF05164	Cell division protein ZapA
BkAM31D_18485	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
BkAM31D_18485	PF03483	B3/4 domain
BkAM31D_18485	PF03484	tRNA synthetase B5 domain
BkAM31D_18485	PF03147	Ferredoxin-fold anticodon binding domain
BkAM31D_18485	PF01588	Putative tRNA binding domain
BkAM31D_18490	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
BkAM31D_18490	PF01409	tRNA synthetases class II core domain (F)
BkAM31D_18500	PF08032	RNA 2'-O ribose methyltransferase substrate binding
BkAM31D_18500	PF00588	SpoU rRNA Methylase family
BkAM31D_18505	PF14098	Small, acid-soluble spore protein I
BkAM31D_18510	PF05343	M42 glutamyl aminopeptidase
BkAM31D_18535	PF00453	Ribosomal protein L20
BkAM31D_18540	PF01632	Ribosomal protein L35
BkAM31D_18545	PF00707	Translation initiation factor IF-3, C-terminal domain
BkAM31D_18545	PF05198	Translation initiation factor IF-3, N-terminal domain
BkAM31D_18555	PF03129	Anticodon binding domain
BkAM31D_18555	PF02824	TGS domain
BkAM31D_18555	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BkAM31D_18555	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BkAM31D_18560	PF02824	TGS domain
BkAM31D_18560	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BkAM31D_18560	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BkAM31D_18560	PF03129	Anticodon binding domain
BkAM31D_18570	PF08812	YtxC-like family
BkAM31D_18575	PF04055	Radical SAM superfamily
BkAM31D_18580	PF07319	Primosomal protein DnaI N-terminus
BkAM31D_18580	PF01695	IstB-like ATP binding protein
BkAM31D_18585	PF07261	Replication initiation and membrane attachment
BkAM31D_18590	PF03477	ATP cone domain
BkAM31D_18595	PF02675	S-adenosylmethionine decarboxylase 
BkAM31D_18600	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
BkAM31D_18600	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BkAM31D_18605	PF01121	Dephospho-CoA kinase
BkAM31D_18610	PF02659	Putative manganese efflux pump
BkAM31D_18630	PF01145	SPFH domain / Band 7 family
BkAM31D_18635	PF01145	SPFH domain / Band 7 family
BkAM31D_18635	PF12221	Bacterial membrane protein N terminal
BkAM31D_18640	PF00989	PAS fold
BkAM31D_18640	PF16736	Single Cache-like 
BkAM31D_18640	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_18640	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_18645	PF00072	Response regulator receiver domain
BkAM31D_18645	PF00486	Transcriptional regulatory protein, C terminal
BkAM31D_18650	PF00056	lactate/malate dehydrogenase, NAD binding domain
BkAM31D_18650	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BkAM31D_18655	PF00180	Isocitrate/isopropylmalate dehydrogenase
BkAM31D_18660	PF00285	Citrate synthase, C-terminal domain
BkAM31D_18665	PF04284	Protein of unknown function (DUF441)
BkAM31D_18670	PF04186	FxsA cytoplasmic membrane protein 
BkAM31D_18675	PF00224	Pyruvate kinase, barrel domain
BkAM31D_18675	PF00391	PEP-utilising enzyme, mobile domain
BkAM31D_18675	PF02887	Pyruvate kinase, alpha/beta domain
BkAM31D_18680	PF00365	Phosphofructokinase
BkAM31D_18700	PF07729	FCD domain
BkAM31D_18700	PF00392	Bacterial regulatory proteins, gntR family
BkAM31D_18705	PF03949	Malic enzyme, NAD binding domain
BkAM31D_18705	PF00390	Malic enzyme, N-terminal domain
BkAM31D_18710	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
BkAM31D_18710	PF14579	Helix-hairpin-helix motif
BkAM31D_18710	PF07733	Bacterial DNA polymerase III alpha NTPase domain
BkAM31D_18710	PF01336	OB-fold nucleic acid binding domain
BkAM31D_18710	PF02811	PHP domain
BkAM31D_18715	PF14034	Sporulation protein YtrH
BkAM31D_18730	PF01368	DHH family
BkAM31D_18730	PF02272	DHHA1 domain
BkAM31D_18760	PF01321	Creatinase/Prolidase N-terminal domain
BkAM31D_18760	PF00557	Metallopeptidase family M24
BkAM31D_18780	PF14698	Argininosuccinate lyase C-terminal
BkAM31D_18780	PF00206	Lyase
BkAM31D_18785	PF00764	Arginosuccinate synthase
BkAM31D_18795	PF12787	EcsC protein family
BkAM31D_18800	PF01966	HD domain
BkAM31D_18805	PF00871	Acetokinase family
BkAM31D_18820	PF08534	Redoxin
BkAM31D_18840	PF06271	RDD family
BkAM31D_18845	PF01343	Peptidase family S49
BkAM31D_18850	PF01513	ATP-NAD kinase
BkAM31D_18865	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BkAM31D_18870	PF02568	Thiamine biosynthesis protein (ThiI)
BkAM31D_18870	PF02926	THUMP domain
BkAM31D_18875	PF00266	Aminotransferase class-V
BkAM31D_18880	PF06160	Septation ring formation regulator, EzrA 
BkAM31D_18885	PF02811	PHP domain
BkAM31D_18890	PF00440	Bacterial regulatory proteins, tetR family
BkAM31D_18895	PF13185	GAF domain
BkAM31D_18900	PF00163	Ribosomal protein S4/S9 N-terminal domain
BkAM31D_18900	PF01479	S4 domain
BkAM31D_18905	PF00579	tRNA synthetases class I (W and Y)
BkAM31D_18905	PF01479	S4 domain
BkAM31D_18915	PF00912	Transglycosylase
BkAM31D_18915	PF00905	Penicillin binding protein transpeptidase domain
BkAM31D_18920	PF13193	AMP-binding enzyme C-terminal domain
BkAM31D_18920	PF00501	AMP-binding enzyme
BkAM31D_18925	PF00583	Acetyltransferase (GNAT) family
BkAM31D_18930	PF00571	CBS domain
BkAM31D_18935	PF00850	Histone deacetylase domain
BkAM31D_18940	PF01048	Phosphorylase superfamily
BkAM31D_18945	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
BkAM31D_18945	PF00691	OmpA family
BkAM31D_18950	PF01618	MotA/TolQ/ExbB proton channel family
BkAM31D_18955	PF00356	Bacterial regulatory proteins, lacI family
BkAM31D_18960	PF01817	Chorismate mutase type II
BkAM31D_18960	PF00793	DAHP synthetase I family
BkAM31D_18965	PF12732	YtxH-like protein
BkAM31D_18975	PF02073	Thermophilic metalloprotease (M29)
BkAM31D_18980	PF08245	Mur ligase middle domain
BkAM31D_18980	PF01225	Mur ligase family, catalytic domain
BkAM31D_18980	PF02875	Mur ligase family, glutamate ligase domain
BkAM31D_18990	PF01580	FtsK/SpoIIIE family
BkAM31D_18990	PF17854	FtsK alpha domain
BkAM31D_18990	PF09397	Ftsk gamma domain
BkAM31D_18995	PF07285	Protein of unknown function (DUF1444)
BkAM31D_19000	PF00085	Thioredoxin
BkAM31D_19015	PF11071	Nucleoside 2-deoxyribosyltransferase YtoQ
BkAM31D_19025	PF01931	Protein of unknown function DUF84
BkAM31D_19030	PF05343	M42 glutamyl aminopeptidase
BkAM31D_19040	PF00753	Metallo-beta-lactamase superfamily
BkAM31D_19045	PF02390	Putative methyltransferase 
BkAM31D_19055	PF01636	Phosphotransferase enzyme family
BkAM31D_19060	PF17999	Pullulanase N1-terminal domain
BkAM31D_19060	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
BkAM31D_19060	PF00128	Alpha amylase, catalytic domain
BkAM31D_19065	PF00551	Formyl transferase
BkAM31D_19065	PF01842	ACT domain
BkAM31D_19080	PF04172	LrgB-like family 
BkAM31D_19085	PF03788	LrgA family
BkAM31D_19090	PF02834	LigT like Phosphoesterase
BkAM31D_19095	PF00291	Pyridoxal-phosphate dependent enzyme
BkAM31D_19100	PF01546	Peptidase family M20/M25/M40
BkAM31D_19105	PF08220	DeoR-like helix-turn-helix domain
BkAM31D_19110	PF00849	RNA pseudouridylate synthase
BkAM31D_19110	PF01479	S4 domain
BkAM31D_19120	PF01098	Cell cycle protein
BkAM31D_19125	PF01098	Cell cycle protein
BkAM31D_19150	PF09334	tRNA synthetases class I (M)
BkAM31D_19150	PF08264	Anticodon-binding domain of tRNA
BkAM31D_19150	PF00133	tRNA synthetases class I (I, L, M and V)
BkAM31D_19150	PF13603	Leucyl-tRNA synthetase, Domain 2
BkAM31D_19160	PF07690	Major Facilitator Superfamily
BkAM31D_19165	PF04055	Radical SAM superfamily
BkAM31D_19165	PF16199	Radical_SAM C-terminal domain
BkAM31D_19170	PF06962	Putative rRNA methylase
BkAM31D_19175	PF00484	Carbonic anhydrase
BkAM31D_19180	PF10776	Protein of unknown function (DUF2600)
BkAM31D_19185	PF12146	Serine aminopeptidase, S33
BkAM31D_19190	PF00132	Bacterial transferase hexapeptide (six repeats)
BkAM31D_19195	PF07561	Domain of Unknown Function (DUF1540)
BkAM31D_19200	PF02772	S-adenosylmethionine synthetase, central domain
BkAM31D_19200	PF00438	S-adenosylmethionine synthetase, N-terminal domain
BkAM31D_19200	PF02773	S-adenosylmethionine synthetase, C-terminal domain
BkAM31D_19215	PF01293	Phosphoenolpyruvate carboxykinase
BkAM31D_19220	PF00534	Glycosyl transferases group 1
BkAM31D_19220	PF13439	Glycosyltransferase Family 4
BkAM31D_19225	PF01569	PAP2 superfamily
BkAM31D_19230	PF00561	alpha/beta hydrolase fold
BkAM31D_19230	PF08386	TAP-like protein
BkAM31D_19235	PF00326	Prolyl oligopeptidase family
BkAM31D_19245	PF00005	ABC transporter
BkAM31D_19250	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_19255	PF00293	NUDIX domain
BkAM31D_19260	PF07690	Major Facilitator Superfamily
BkAM31D_19265	PF14183	YwpF-like protein
BkAM31D_19280	PF00155	Aminotransferase class I and II
BkAM31D_19285	PF00005	ABC transporter
BkAM31D_19285	PF12848	ABC transporter
BkAM31D_19290	PF01712	Deoxynucleoside kinase
BkAM31D_19295	PF01712	Deoxynucleoside kinase
BkAM31D_19325	PF02899	Phage integrase, N-terminal SAM-like domain
BkAM31D_19325	PF00589	Phage integrase family
BkAM31D_19330	PF10282	Lactonase, 7-bladed beta-propeller
BkAM31D_19345	PF07690	Major Facilitator Superfamily
BkAM31D_19350	PF00180	Isocitrate/isopropylmalate dehydrogenase
BkAM31D_19355	PF00939	Sodium:sulfate symporter transmembrane region
BkAM31D_19365	PF00072	Response regulator receiver domain
BkAM31D_19370	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
BkAM31D_19370	PF17203	Single cache domain 3
BkAM31D_19370	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_19415	PF00245	Alkaline phosphatase
BkAM31D_19445	PF01680	SOR/SNZ family
BkAM31D_19450	PF01619	Proline dehydrogenase
BkAM31D_19455	PF00171	Aldehyde dehydrogenase family
BkAM31D_19465	PF00202	Aminotransferase class-III
BkAM31D_19470	PF02954	Bacterial regulatory protein, Fis family
BkAM31D_19470	PF13426	PAS domain
BkAM31D_19470	PF00158	Sigma-54 interaction domain
BkAM31D_19475	PF03606	C4-dicarboxylate anaerobic carrier
BkAM31D_19480	PF01546	Peptidase family M20/M25/M40
BkAM31D_19480	PF07687	Peptidase dimerisation domain
BkAM31D_19485	PF07969	Amidohydrolase family
BkAM31D_19490	PF00158	Sigma-54 interaction domain
BkAM31D_19490	PF13426	PAS domain
BkAM31D_19490	PF02954	Bacterial regulatory protein, Fis family
BkAM31D_19495	PF13426	PAS domain
BkAM31D_19495	PF00158	Sigma-54 interaction domain
BkAM31D_19495	PF02954	Bacterial regulatory protein, Fis family
BkAM31D_19600	PF02899	Phage integrase, N-terminal SAM-like domain
BkAM31D_19600	PF00589	Phage integrase family
BkAM31D_19660	PF00239	Resolvase, N terminal domain
BkAM31D_19660	PF02796	Helix-turn-helix domain of resolvase
BkAM31D_19670	PF02899	Phage integrase, N-terminal SAM-like domain
BkAM31D_19670	PF00589	Phage integrase family
BkAM31D_19680	PF02254	TrkA-N domain
BkAM31D_19680	PF07885	Ion channel
BkAM31D_19685	PF08868	YugN-like family
BkAM31D_19690	PF00342	Phosphoglucose isomerase
BkAM31D_19695	PF00465	Iron-containing alcohol dehydrogenase 
BkAM31D_19700	PF04070	Domain of unknown function (DUF378)
BkAM31D_19705	PF00575	S1 RNA binding domain
BkAM31D_19710	PF00270	DEAD/DEAH box helicase
BkAM31D_19710	PF00271	Helicase conserved C-terminal domain
BkAM31D_19715	PF02110	Hydroxyethylthiazole kinase family
BkAM31D_19720	PF00155	Aminotransferase class I and II
BkAM31D_19725	PF01037	Lrp/AsnC ligand binding domain
BkAM31D_19730	PF00857	Isochorismatase family
BkAM31D_19740	PF03631	Virulence factor BrkB
BkAM31D_19745	PF00216	Bacterial DNA-binding protein
BkAM31D_19750	PF06271	RDD family
BkAM31D_19755	PF02632	BioY family
BkAM31D_19760	PF03553	Na+/H+ antiporter family
BkAM31D_19760	PF13726	Na+-H+ antiporter family
BkAM31D_19765	PF00005	ABC transporter
BkAM31D_19770	PF00392	Bacterial regulatory proteins, gntR family
BkAM31D_19780	PF03480	Bacterial extracellular solute-binding protein, family 7
BkAM31D_19785	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
BkAM31D_19790	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
BkAM31D_19795	PF00883	Cytosol aminopeptidase family, catalytic domain
BkAM31D_19795	PF02789	Cytosol aminopeptidase family, N-terminal domain
BkAM31D_19800	PF02681	Divergent PAP2 family
BkAM31D_19810	PF06725	3D domain
BkAM31D_19820	PF17302	Family of unknown function (DUF5351)
BkAM31D_19825	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BkAM31D_19830	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BkAM31D_19835	PF01521	Iron-sulphur cluster biosynthesis
BkAM31D_19845	PF04055	Radical SAM superfamily
BkAM31D_19855	PF01678	Diaminopimelate epimerase
BkAM31D_19865	PF07293	Protein of unknown function (DUF1450)
BkAM31D_19870	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BkAM31D_19885	PF07315	Protein of unknown function (DUF1462)
BkAM31D_19890	PF01106	NifU-like domain
BkAM31D_19895	PF11132	Transcriptional regulator protein (SplA)
BkAM31D_19900	PF00288	GHMP kinases N terminal domain
BkAM31D_19900	PF08544	GHMP kinases C terminal 
BkAM31D_19905	PF00291	Pyridoxal-phosphate dependent enzyme
BkAM31D_19910	PF00742	Homoserine dehydrogenase
BkAM31D_19910	PF01842	ACT domain
BkAM31D_19910	PF03447	Homoserine dehydrogenase, NAD binding domain
BkAM31D_19920	PF04608	Phosphatidylglycerophosphatase A
BkAM31D_19925	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_19925	PF13188	PAS domain
BkAM31D_19925	PF13426	PAS domain
BkAM31D_19925	PF00989	PAS fold
BkAM31D_19925	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_19930	PF13344	Haloacid dehalogenase-like hydrolase
BkAM31D_19940	PF01934	Protein of unknown function DUF86
BkAM31D_19955	PF06265	Protein of unknown function (DUF1027)
BkAM31D_19960	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
BkAM31D_19965	PF04055	Radical SAM superfamily
BkAM31D_19965	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
BkAM31D_19970	PF01551	Peptidase family M23
BkAM31D_20020	PF03553	Na+/H+ antiporter family
BkAM31D_20030	PF09560	Sporulation protein YunB (Spo_YunB)
BkAM31D_20035	PF00186	Dihydrofolate reductase
BkAM31D_20040	PF11181	Heat induced stress protein YflT
BkAM31D_20040	PF09557	Domain of unknown function (DUF2382)
BkAM31D_20045	PF09557	Domain of unknown function (DUF2382)
BkAM31D_20045	PF05239	PRC-barrel domain
BkAM31D_20055	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
BkAM31D_20075	PF16363	GDP-mannose 4,6 dehydratase
BkAM31D_20095	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_20095	PF00989	PAS fold
BkAM31D_20095	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_20095	PF08447	PAS fold
BkAM31D_20110	PF00303	Thymidylate synthase
BkAM31D_20125	PF16868	NMT1-like family
BkAM31D_20130	PF01966	HD domain
BkAM31D_20130	PF11871	Domain of unknown function (DUF3391)
BkAM31D_20135	PF08827	Domain of unknown function (DUF1805)
BkAM31D_20140	PF02872	5'-nucleotidase, C-terminal domain
BkAM31D_20145	PF01925	Sulfite exporter TauE/SafE
BkAM31D_20150	PF01904	Protein of unknown function DUF72
BkAM31D_20155	PF01458	Uncharacterized protein family (UPF0051)
BkAM31D_20160	PF01592	NifU-like N terminal domain
BkAM31D_20165	PF00266	Aminotransferase class-V
BkAM31D_20170	PF01458	Uncharacterized protein family (UPF0051)
BkAM31D_20175	PF00005	ABC transporter
BkAM31D_20185	PF02627	Carboxymuconolactone decarboxylase family
BkAM31D_20190	PF03180	NLPA lipoprotein
BkAM31D_20195	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_20200	PF09383	NIL domain
BkAM31D_20200	PF00005	ABC transporter
BkAM31D_20215	PF01597	Glycine cleavage H-protein
BkAM31D_20220	PF03960	ArsC family
BkAM31D_20230	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BkAM31D_20230	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BkAM31D_20230	PF02770	Acyl-CoA dehydrogenase, middle domain
BkAM31D_20235	PF02803	Thiolase, C-terminal domain
BkAM31D_20235	PF00108	Thiolase, N-terminal domain
BkAM31D_20240	PF00378	Enoyl-CoA hydratase/isomerase
BkAM31D_20240	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
BkAM31D_20240	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
BkAM31D_20250	PF07875	Coat F domain
BkAM31D_20310	PF00437	Type II/IV secretion system protein
BkAM31D_20315	PF13614	AAA domain
BkAM31D_20360	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_20360	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_20360	PF16736	Single Cache-like 
BkAM31D_20360	PF00989	PAS fold
BkAM31D_20380	PF01668	SmpB protein
BkAM31D_20385	PF08206	Ribonuclease B OB domain
BkAM31D_20385	PF00773	RNB domain
BkAM31D_20385	PF00575	S1 RNA binding domain
BkAM31D_20385	PF17876	Cold shock domain
BkAM31D_20390	PF12146	Serine aminopeptidase, S33
BkAM31D_20410	PF08141	Small acid-soluble spore protein H family
BkAM31D_20420	PF13411	MerR HTH family regulatory protein
BkAM31D_20420	PF07739	TipAS antibiotic-recognition domain
BkAM31D_20425	PF03358	NADPH-dependent FMN reductase
BkAM31D_20430	PF07969	Amidohydrolase family
BkAM31D_20435	PF07969	Amidohydrolase family
BkAM31D_20445	PF00005	ABC transporter
BkAM31D_20450	PF02633	Creatinine amidohydrolase
BkAM31D_20460	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_20475	PF04199	Putative cyclase
BkAM31D_20490	PF00113	Enolase, C-terminal TIM barrel domain
BkAM31D_20490	PF03952	Enolase, N-terminal domain
BkAM31D_20495	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
BkAM31D_20495	PF01676	Metalloenzyme superfamily
BkAM31D_20500	PF00121	Triosephosphate isomerase
BkAM31D_20505	PF00162	Phosphoglycerate kinase
BkAM31D_20510	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
BkAM31D_20510	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BkAM31D_20515	PF04198	Putative sugar-binding domain
BkAM31D_20525	PF04552	Sigma-54, DNA binding domain
BkAM31D_20525	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
BkAM31D_20525	PF04963	Sigma-54 factor, core binding domain
BkAM31D_20530	PF00574	Clp protease
BkAM31D_20535	PF00381	PTS HPr component phosphorylation site
BkAM31D_20540	PF02650	WhiA C-terminal HTH domain
BkAM31D_20540	PF10298	WhiA N-terminal LAGLIDADG-like domain
BkAM31D_20540	PF14527	WhiA LAGLIDADG-like domain
BkAM31D_20545	PF01933	Uncharacterised protein family UPF0052
BkAM31D_20550	PF03668	P-loop ATPase protein family
BkAM31D_20555	PF00293	NUDIX domain
BkAM31D_20560	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BkAM31D_20570	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
BkAM31D_20570	PF01502	Phosphoribosyl-AMP cyclohydrolase
BkAM31D_20575	PF00977	Histidine biosynthesis protein
BkAM31D_20580	PF00977	Histidine biosynthesis protein
BkAM31D_20585	PF00117	Glutamine amidotransferase class-I
BkAM31D_20590	PF00475	Imidazoleglycerol-phosphate dehydratase
BkAM31D_20595	PF00815	Histidinol dehydrogenase
BkAM31D_20600	PF01634	ATP phosphoribosyltransferase
BkAM31D_20605	PF13393	Histidyl-tRNA synthetase
BkAM31D_20610	PF14602	Hexapeptide repeat of succinyl-transferase
BkAM31D_20615	PF13419	Haloacid dehalogenase-like hydrolase
BkAM31D_20620	PF07670	Nucleoside recognition
BkAM31D_20625	PF01790	Prolipoprotein diacylglyceryl transferase
BkAM31D_20630	PF01790	Prolipoprotein diacylglyceryl transferase
BkAM31D_20635	PF07475	HPr Serine kinase C-terminal domain
BkAM31D_20635	PF02603	HPr Serine kinase N terminus
BkAM31D_20640	PF04020	Mycobacterial 4 TMS phage holin, superfamily IV
BkAM31D_20645	PF04024	PspC domain
BkAM31D_20650	PF13349	Putative adhesin
BkAM31D_20665	PF02151	UvrB/uvrC motif
BkAM31D_20665	PF12344	Ultra-violet resistance protein B
BkAM31D_20665	PF00271	Helicase conserved C-terminal domain
BkAM31D_20665	PF17757	UvrB interaction domain
BkAM31D_20665	PF04851	Type III restriction enzyme, res subunit
BkAM31D_20675	PF17820	PDZ domain
BkAM31D_20680	PF17820	PDZ domain
BkAM31D_20680	PF03572	Peptidase family S41
BkAM31D_20680	PF01471	Putative peptidoglycan binding domain
BkAM31D_20685	PF01551	Peptidase family M23
BkAM31D_20685	PF08525	Opacity-associated protein A N-terminal motif
BkAM31D_20685	PF01476	LysM domain
BkAM31D_20690	PF18075	FtsX extracellular domain
BkAM31D_20690	PF02687	FtsX-like permease family
BkAM31D_20695	PF00005	ABC transporter
BkAM31D_20705	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BkAM31D_20705	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BkAM31D_20710	PF00472	RF-1 domain
BkAM31D_20710	PF03462	PCRF domain
BkAM31D_20715	PF07517	SecA DEAD-like domain
BkAM31D_20715	PF02810	SEC-C motif
BkAM31D_20715	PF07516	SecA Wing and Scaffold domain
BkAM31D_20715	PF01043	SecA preprotein cross-linking domain
BkAM31D_20735	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus
BkAM31D_20735	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
BkAM31D_20740	PF01348	Type II intron maturase
BkAM31D_20740	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
BkAM31D_20760	PF00313	'Cold-shock' DNA-binding domain
BkAM31D_20780	PF02561	Flagellar protein FliS
BkAM31D_20800	PF00248	Aldo/keto reductase family
BkAM31D_20805	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BkAM31D_20805	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BkAM31D_20810	PF01261	Xylose isomerase-like TIM barrel
BkAM31D_20815	PF04854	Protein of unknown function, DUF624
BkAM31D_20820	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_20825	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_20835	PF00480	ROK family
BkAM31D_20840	PF04616	Glycosyl hydrolases family 43
BkAM31D_20840	PF17851	Beta xylosidase C-terminal Concanavalin A-like domain 
BkAM31D_20845	PF00331	Glycosyl hydrolase family 10
BkAM31D_20855	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
BkAM31D_20855	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
BkAM31D_20865	PF00669	Bacterial flagellin N-terminal helical region
BkAM31D_20865	PF00700	Bacterial flagellin C-terminal helical region
BkAM31D_20870	PF02599	Global regulator protein family
BkAM31D_20875	PF02623	FliW protein
BkAM31D_20885	PF00669	Bacterial flagellin N-terminal helical region
BkAM31D_20885	PF00700	Bacterial flagellin C-terminal helical region
BkAM31D_20890	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BkAM31D_20890	PF00460	Flagella basal body rod protein
BkAM31D_20910	PF00156	Phosphoribosyl transferase domain
BkAM31D_20915	PF04851	Type III restriction enzyme, res subunit
BkAM31D_20915	PF00271	Helicase conserved C-terminal domain
BkAM31D_20985	PF00589	Phage integrase family
BkAM31D_20985	PF02899	Phage integrase, N-terminal SAM-like domain
BkAM31D_20990	PF13443	Cro/C1-type HTH DNA-binding domain
BkAM31D_21145	PF00436	Single-strand binding protein family
BkAM31D_21215	PF03796	DnaB-like helicase C terminal domain
BkAM31D_21225	PF07261	Replication initiation and membrane attachment
BkAM31D_21225	PF14297	Domain of unknown function (DUF4373)
BkAM31D_21235	PF00753	Metallo-beta-lactamase superfamily
BkAM31D_21255	PF13476	AAA domain
BkAM31D_21270	PF08769	Sporulation initiation factor Spo0A C terminal
BkAM31D_21270	PF00072	Response regulator receiver domain
BkAM31D_21315	PF01381	Helix-turn-helix
BkAM31D_21335	PF02796	Helix-turn-helix domain of resolvase
BkAM31D_21335	PF00239	Resolvase, N terminal domain
BkAM31D_21340	PF02645	Uncharacterised protein, DegV family COG1307
BkAM31D_21345	PF00072	Response regulator receiver domain
BkAM31D_21345	PF00196	Bacterial regulatory proteins, luxR family
BkAM31D_21350	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_21350	PF05384	Sensor protein DegS
BkAM31D_21350	PF07730	Histidine kinase
BkAM31D_21355	PF09186	Domain of unknown function (DUF1949)
BkAM31D_21355	PF01205	Uncharacterized protein family UPF0029
BkAM31D_21365	PF01894	Uncharacterised protein family UPF0047
BkAM31D_21370	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
BkAM31D_21370	PF01476	LysM domain
BkAM31D_21375	PF12911	N-terminal TM domain of oligopeptide transport permease C
BkAM31D_21375	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_21380	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_21385	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BkAM31D_21390	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BkAM31D_21390	PF00005	ABC transporter
BkAM31D_21395	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BkAM31D_21395	PF00005	ABC transporter
BkAM31D_21400	PF03816	Cell envelope-related transcriptional attenuator domain
BkAM31D_21405	PF00953	Glycosyl transferase family 4
BkAM31D_21410	PF05036	Sporulation related domain
BkAM31D_21410	PF08239	Bacterial SH3 domain
BkAM31D_21410	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
BkAM31D_21415	PF01476	LysM domain
BkAM31D_21415	PF00246	Zinc carboxypeptidase
BkAM31D_21420	PF00483	Nucleotidyl transferase
BkAM31D_21425	PF01520	N-acetylmuramoyl-L-alanine amidase
BkAM31D_21430	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
BkAM31D_21430	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
BkAM31D_21430	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
BkAM31D_21435	PF00082	Subtilase family
BkAM31D_21440	PF02397	Bacterial sugar transferase
BkAM31D_21445	PF02655	ATP-grasp domain
BkAM31D_21445	PF04262	Glutamate-cysteine ligase 
BkAM31D_21445	PF18419	ATP-grasp-like domain
BkAM31D_21450	PF08245	Mur ligase middle domain
BkAM31D_21450	PF08443	RimK-like ATP-grasp domain
BkAM31D_21450	PF02875	Mur ligase family, glutamate ligase domain
BkAM31D_21465	PF01501	Glycosyl transferase family 8
BkAM31D_21465	PF00535	Glycosyl transferase family 2
BkAM31D_21470	PF00005	ABC transporter
BkAM31D_21470	PF08239	Bacterial SH3 domain
BkAM31D_21480	PF01061	ABC-2 type transporter
BkAM31D_21485	PF00535	Glycosyl transferase family 2
BkAM31D_21495	PF13439	Glycosyltransferase Family 4
BkAM31D_21495	PF00534	Glycosyl transferases group 1
BkAM31D_21510	PF01235	Sodium:alanine symporter family
BkAM31D_21525	PF03816	Cell envelope-related transcriptional attenuator domain
BkAM31D_21530	PF01471	Putative peptidoglycan binding domain
BkAM31D_21530	PF07486	Cell Wall Hydrolase
BkAM31D_21540	PF08141	Small acid-soluble spore protein H family
BkAM31D_21550	PF00990	Diguanylate cyclase, GGDEF domain
BkAM31D_21560	PF01979	Amidohydrolase family
BkAM31D_21560	PF13382	Adenine deaminase C-terminal domain
BkAM31D_21565	PF00005	ABC transporter
BkAM31D_21565	PF08402	TOBE domain
BkAM31D_21570	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_21575	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_21580	PF01156	Inosine-uridine preferring nucleoside hydrolase
BkAM31D_21585	PF13416	Bacterial extracellular solute-binding protein
BkAM31D_21595	PF00916	Sulfate permease family
BkAM31D_21595	PF01740	STAS domain
BkAM31D_21600	PF01636	Phosphotransferase enzyme family
BkAM31D_21610	PF00375	Sodium:dicarboxylate symporter family
BkAM31D_21620	PF03806	AbgT putative transporter family
BkAM31D_21625	PF00892	EamA-like transporter family
BkAM31D_21640	PF00356	Bacterial regulatory proteins, lacI family
BkAM31D_21645	PF02028	BCCT, betaine/carnitine/choline family transporter
BkAM31D_21660	PF00171	Aldehyde dehydrogenase family
BkAM31D_21665	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
BkAM31D_21665	PF00355	Rieske [2Fe-2S] domain
BkAM31D_21675	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BkAM31D_21690	PF02872	5'-nucleotidase, C-terminal domain
BkAM31D_21690	PF00149	Calcineurin-like phosphoesterase
BkAM31D_21690	PF00565	Staphylococcal nuclease homologue
BkAM31D_21690	PF00746	LPXTG cell wall anchor motif
BkAM31D_21705	PF01497	Periplasmic binding protein
BkAM31D_21720	PF05525	Branched-chain amino acid transport protein
BkAM31D_21755	PF03466	LysR substrate binding domain
BkAM31D_21755	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BkAM31D_21760	PF14602	Hexapeptide repeat of succinyl-transferase
BkAM31D_21760	PF12464	Maltose acetyltransferase 
BkAM31D_21765	PF00654	Voltage gated chloride channel
BkAM31D_21770	PF00990	Diguanylate cyclase, GGDEF domain
BkAM31D_21770	PF00563	EAL domain
BkAM31D_21770	PF03707	Bacterial signalling protein N terminal repeat
BkAM31D_21780	PF00990	Diguanylate cyclase, GGDEF domain
BkAM31D_21780	PF03707	Bacterial signalling protein N terminal repeat
BkAM31D_21780	PF00563	EAL domain
BkAM31D_21785	PF00990	Diguanylate cyclase, GGDEF domain
BkAM31D_21785	PF03707	Bacterial signalling protein N terminal repeat
BkAM31D_21785	PF00563	EAL domain
BkAM31D_21800	PF01546	Peptidase family M20/M25/M40
BkAM31D_21800	PF07687	Peptidase dimerisation domain
BkAM31D_21810	PF13378	Enolase C-terminal domain-like
BkAM31D_21810	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
BkAM31D_21835	PF05525	Branched-chain amino acid transport protein
BkAM31D_21840	PF05525	Branched-chain amino acid transport protein
BkAM31D_21845	PF01619	Proline dehydrogenase
BkAM31D_21850	PF05544	Proline racemase
BkAM31D_21855	PF13426	PAS domain
BkAM31D_21855	PF00158	Sigma-54 interaction domain
BkAM31D_21855	PF02954	Bacterial regulatory protein, Fis family
BkAM31D_21860	PF00171	Aldehyde dehydrogenase family
BkAM31D_21865	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BkAM31D_21865	PF03466	LysR substrate binding domain
BkAM31D_21875	PF00474	Sodium:solute symporter family
BkAM31D_21895	PF00595	PDZ domain
BkAM31D_21940	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BkAM31D_21940	PF00056	lactate/malate dehydrogenase, NAD binding domain
BkAM31D_21945	PF02558	Ketopantoate reductase PanE/ApbA
BkAM31D_21945	PF08546	Ketopantoate reductase PanE/ApbA C terminal
BkAM31D_21950	PF09339	IclR helix-turn-helix domain
BkAM31D_21950	PF01614	Bacterial transcriptional regulator
BkAM31D_21955	PF03480	Bacterial extracellular solute-binding protein, family 7
BkAM31D_21965	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
BkAM31D_21970	PF00171	Aldehyde dehydrogenase family
BkAM31D_21975	PF03323	Bacillus/Clostridium GerA spore germination protein
BkAM31D_21995	PF03845	Spore germination protein
BkAM31D_22020	PF13472	GDSL-like Lipase/Acylhydrolase family
BkAM31D_22040	PF07690	Major Facilitator Superfamily
BkAM31D_22045	PF02567	Phenazine biosynthesis-like protein
BkAM31D_22070	PF00392	Bacterial regulatory proteins, gntR family
BkAM31D_22070	PF00155	Aminotransferase class I and II
BkAM31D_22100	PF02595	Glycerate kinase family
BkAM31D_22105	PF02447	GntP family permease
BkAM31D_22110	PF13556	PucR C-terminal helix-turn-helix domain
BkAM31D_22110	PF17853	GGDEF-like domain
BkAM31D_22110	PF05651	Putative sugar diacid recognition
BkAM31D_22135	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BkAM31D_22150	PF01546	Peptidase family M20/M25/M40
BkAM31D_22165	PF01546	Peptidase family M20/M25/M40
BkAM31D_22165	PF07687	Peptidase dimerisation domain
BkAM31D_22170	PF03606	C4-dicarboxylate anaerobic carrier
BkAM31D_22190	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BkAM31D_22190	PF03466	LysR substrate binding domain
BkAM31D_22195	PF00491	Arginase family
BkAM31D_22200	PF03616	Sodium/glutamate symporter
BkAM31D_22220	PF02028	BCCT, betaine/carnitine/choline family transporter
BkAM31D_22235	PF00144	Beta-lactamase
BkAM31D_22240	PF04542	Sigma-70 region 2 
BkAM31D_22240	PF08281	Sigma-70, region 4
BkAM31D_22255	PF13673	Acetyltransferase (GNAT) domain
BkAM31D_22255	PF04229	GrpB protein
BkAM31D_22315	PF06628	Catalase-related immune-responsive
BkAM31D_22315	PF00199	Catalase
BkAM31D_22325	PF08281	Sigma-70, region 4
BkAM31D_22325	PF04542	Sigma-70 region 2 
BkAM31D_22340	PF03551	Transcriptional regulator PadR-like family
BkAM31D_22370	PF00248	Aldo/keto reductase family
BkAM31D_22380	PF02687	FtsX-like permease family
BkAM31D_22380	PF12704	MacB-like periplasmic core domain
BkAM31D_22385	PF00005	ABC transporter
BkAM31D_22390	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
BkAM31D_22395	PF13732	Domain of unknown function (DUF4162)
BkAM31D_22395	PF00005	ABC transporter
BkAM31D_22410	PF09221	Bacteriocin class IId cyclical uberolysin-like
BkAM31D_22420	PF00196	Bacterial regulatory proteins, luxR family
BkAM31D_22420	PF00072	Response regulator receiver domain
BkAM31D_22445	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
BkAM31D_22450	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_22455	PF00005	ABC transporter
BkAM31D_22455	PF00571	CBS domain
BkAM31D_22465	PF00128	Alpha amylase, catalytic domain
BkAM31D_22480	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
BkAM31D_22485	PF01979	Amidohydrolase family
BkAM31D_22490	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BkAM31D_22490	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BkAM31D_22495	PF13580	SIS domain
BkAM31D_22500	PF16123	Hydroxyacylglutathione hydrolase C-terminus
BkAM31D_22500	PF00753	Metallo-beta-lactamase superfamily
BkAM31D_22510	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BkAM31D_22510	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BkAM31D_22515	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_22520	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_22530	PF00291	Pyridoxal-phosphate dependent enzyme
BkAM31D_22535	PF01546	Peptidase family M20/M25/M40
BkAM31D_22535	PF07687	Peptidase dimerisation domain
BkAM31D_22550	PF00005	ABC transporter
BkAM31D_22555	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_22560	PF00497	Bacterial extracellular solute-binding proteins, family 3
BkAM31D_22585	PF01145	SPFH domain / Band 7 family
BkAM31D_22585	PF15975	Flotillin
BkAM31D_22595	PF01979	Amidohydrolase family
BkAM31D_22600	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
BkAM31D_22605	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
BkAM31D_22610	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
BkAM31D_22615	PF03480	Bacterial extracellular solute-binding protein, family 7
BkAM31D_22620	PF00356	Bacterial regulatory proteins, lacI family
BkAM31D_22630	PF08240	Alcohol dehydrogenase GroES-like domain
BkAM31D_22630	PF00107	Zinc-binding dehydrogenase
BkAM31D_22645	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
BkAM31D_22660	PF03466	LysR substrate binding domain
BkAM31D_22660	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BkAM31D_22685	PF01695	IstB-like ATP binding protein
BkAM31D_22720	PF16363	GDP-mannose 4,6 dehydratase
BkAM31D_22725	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
BkAM31D_22725	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
BkAM31D_22725	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
BkAM31D_22740	PF00534	Glycosyl transferases group 1
BkAM31D_22740	PF13439	Glycosyltransferase Family 4
BkAM31D_22755	PF13439	Glycosyltransferase Family 4
BkAM31D_22755	PF00534	Glycosyl transferases group 1
BkAM31D_22760	PF00132	Bacterial transferase hexapeptide (six repeats)
BkAM31D_22765	PF02397	Bacterial sugar transferase
BkAM31D_22770	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
BkAM31D_22785	PF02719	Polysaccharide biosynthesis protein
BkAM31D_22790	PF00483	Nucleotidyl transferase
BkAM31D_22810	PF13614	AAA domain
BkAM31D_22815	PF13807	G-rich domain on putative tyrosine kinase
BkAM31D_22815	PF02706	Chain length determinant protein
BkAM31D_22820	PF03816	Cell envelope-related transcriptional attenuator domain
BkAM31D_22880	PF12650	Domain of unknown function (DUF3784)
BkAM31D_22885	PF01476	LysM domain
BkAM31D_22885	PF00877	NlpC/P60 family
BkAM31D_22905	PF08220	DeoR-like helix-turn-helix domain
BkAM31D_22905	PF00455	DeoR C terminal sensor domain
BkAM31D_22915	PF02779	Transketolase, pyrimidine binding domain
BkAM31D_22915	PF02780	Transketolase, C-terminal domain
BkAM31D_22915	PF00456	Transketolase, thiamine diphosphate binding domain
BkAM31D_22920	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
BkAM31D_22925	PF02734	DAK2 domain
BkAM31D_22930	PF02733	Dak1 domain
BkAM31D_22935	PF02502	Ribose/Galactose Isomerase
BkAM31D_22940	PF07690	Major Facilitator Superfamily
BkAM31D_22945	PF00107	Zinc-binding dehydrogenase
BkAM31D_22945	PF08240	Alcohol dehydrogenase GroES-like domain
BkAM31D_22955	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
BkAM31D_22995	PF07690	Major Facilitator Superfamily
BkAM31D_23000	PF00245	Alkaline phosphatase
BkAM31D_23005	PF07883	Cupin domain
BkAM31D_23010	PF01810	LysE type translocator
BkAM31D_23020	PF07739	TipAS antibiotic-recognition domain
BkAM31D_23020	PF13411	MerR HTH family regulatory protein
BkAM31D_23045	PF00027	Cyclic nucleotide-binding domain
BkAM31D_23050	PF12832	MFS_1 like family
BkAM31D_23055	PF00962	Adenosine/AMP deaminase
BkAM31D_23095	PF02028	BCCT, betaine/carnitine/choline family transporter
BkAM31D_23100	PF04239	Protein of unknown function (DUF421)
BkAM31D_23140	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_23145	PF00005	ABC transporter
BkAM31D_23145	PF09383	NIL domain
BkAM31D_23150	PF00005	ABC transporter
BkAM31D_23155	PF12728	Helix-turn-helix domain
BkAM31D_23155	PF12727	PBP superfamily domain
BkAM31D_23160	PF06445	GyrI-like small molecule binding domain
BkAM31D_23160	PF12833	Helix-turn-helix domain
BkAM31D_23165	PF12146	Serine aminopeptidase, S33
BkAM31D_23170	PF09671	Spore coat protein (Spore_GerQ)
BkAM31D_23175	PF07486	Cell Wall Hydrolase
BkAM31D_23185	PF04262	Glutamate-cysteine ligase 
BkAM31D_23185	PF18419	ATP-grasp-like domain
BkAM31D_23185	PF02655	ATP-grasp domain
BkAM31D_23190	PF00756	Putative esterase
BkAM31D_23195	PF08240	Alcohol dehydrogenase GroES-like domain
BkAM31D_23195	PF00107	Zinc-binding dehydrogenase
BkAM31D_23200	PF01638	HxlR-like helix-turn-helix
BkAM31D_23205	PF00563	EAL domain
BkAM31D_23205	PF00990	Diguanylate cyclase, GGDEF domain
BkAM31D_23205	PF08448	PAS fold
BkAM31D_23205	PF08447	PAS fold
BkAM31D_23210	PF13021	Domain of unknown function (DUF3885)
BkAM31D_23240	PF00296	Luciferase-like monooxygenase
BkAM31D_23245	PF10842	Protein of unknown function (DUF2642)
BkAM31D_23250	PF12833	Helix-turn-helix domain
BkAM31D_23250	PF06445	GyrI-like small molecule binding domain
BkAM31D_23265	PF13007	Transposase C of IS166 homeodomain
BkAM31D_23265	PF13005	zinc-finger binding domain of transposase IS66 
BkAM31D_23265	PF13817	IS66 C-terminal element
BkAM31D_23265	PF03050	Transposase IS66 family 
BkAM31D_23270	PF06445	GyrI-like small molecule binding domain
BkAM31D_23270	PF12833	Helix-turn-helix domain
BkAM31D_23320	PF01522	Polysaccharide deacetylase
BkAM31D_23345	PF13240	zinc-ribbon domain
BkAM31D_23360	PF04239	Protein of unknown function (DUF421)
BkAM31D_23380	PF05853	beta-keto acid cleavage enzyme
BkAM31D_23385	PF00108	Thiolase, N-terminal domain
BkAM31D_23385	PF02803	Thiolase, C-terminal domain
BkAM31D_23390	PF01144	Coenzyme A transferase
BkAM31D_23395	PF01144	Coenzyme A transferase
BkAM31D_23400	PF03466	LysR substrate binding domain
BkAM31D_23400	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BkAM31D_23410	PF07836	DmpG-like communication domain
BkAM31D_23410	PF00682	HMGL-like
BkAM31D_23415	PF01118	Semialdehyde dehydrogenase, NAD binding domain
BkAM31D_23415	PF09290	Prokaryotic acetaldehyde dehydrogenase, dimerisation
BkAM31D_23420	PF09339	IclR helix-turn-helix domain
BkAM31D_23420	PF01614	Bacterial transcriptional regulator
BkAM31D_23425	PF18665	Tetracyclin repressor-like, C-terminal domain
BkAM31D_23425	PF00440	Bacterial regulatory proteins, tetR family
BkAM31D_23435	PF00892	EamA-like transporter family
BkAM31D_23440	PF12833	Helix-turn-helix domain
BkAM31D_23440	PF02311	AraC-like ligand binding domain
BkAM31D_23445	PF08818	Domain of unknown function (DU1801)
BkAM31D_23455	PF03972	MmgE/PrpD family
BkAM31D_23460	PF00378	Enoyl-CoA hydratase/isomerase
BkAM31D_23465	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BkAM31D_23465	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BkAM31D_23465	PF02770	Acyl-CoA dehydrogenase, middle domain
BkAM31D_23470	PF00682	HMGL-like
BkAM31D_23475	PF02515	CoA-transferase family III
BkAM31D_23480	PF01012	Electron transfer flavoprotein domain
BkAM31D_23480	PF00766	Electron transfer flavoprotein FAD-binding domain
BkAM31D_23485	PF01012	Electron transfer flavoprotein domain
BkAM31D_23490	PF01012	Electron transfer flavoprotein domain
BkAM31D_23495	PF00171	Aldehyde dehydrogenase family
BkAM31D_23500	PF01970	Tripartite tricarboxylate transporter TctA family
BkAM31D_23515	PF03401	Tripartite tricarboxylate transporter family receptor
BkAM31D_23520	PF00205	Thiamine pyrophosphate enzyme, central domain
BkAM31D_23520	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BkAM31D_23520	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BkAM31D_23525	PF13183	4Fe-4S dicluster domain
BkAM31D_23525	PF02754	Cysteine-rich domain
BkAM31D_23530	PF03466	LysR substrate binding domain
BkAM31D_23530	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BkAM31D_23535	PF05977	Transmembrane secretion effector
BkAM31D_23540	PF00694	Aconitase C-terminal domain
BkAM31D_23540	PF00330	Aconitase family (aconitate hydratase)
BkAM31D_23545	PF01494	FAD binding domain
BkAM31D_23550	PF07883	Cupin domain
BkAM31D_23555	PF01557	Fumarylacetoacetate (FAA) hydrolase family
BkAM31D_23565	PF13443	Cro/C1-type HTH DNA-binding domain
BkAM31D_23570	PF11188	Protein of unknown function (DUF2975)
BkAM31D_23580	PF13407	Periplasmic binding protein domain
BkAM31D_23585	PF02653	Branched-chain amino acid transport system / permease component
BkAM31D_23590	PF00005	ABC transporter
BkAM31D_23595	PF05025	RbsD / FucU transport protein family
BkAM31D_23600	PF00294	pfkB family carbohydrate kinase
BkAM31D_23605	PF00356	Bacterial regulatory proteins, lacI family
BkAM31D_23640	PF01022	Bacterial regulatory protein, arsR family
BkAM31D_23645	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_23645	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_23645	PF08447	PAS fold
BkAM31D_23645	PF00989	PAS fold
BkAM31D_23765	PF03323	Bacillus/Clostridium GerA spore germination protein
BkAM31D_23775	PF05504	Spore germination B3/ GerAC like, C-terminal 
BkAM31D_23800	PF05504	Spore germination B3/ GerAC like, C-terminal 
BkAM31D_23815	PF01522	Polysaccharide deacetylase
BkAM31D_23830	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BkAM31D_23830	PF00005	ABC transporter
BkAM31D_23835	PF00005	ABC transporter
BkAM31D_23835	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BkAM31D_23850	PF00528	Binding-protein-dependent transport system inner membrane component
BkAM31D_23855	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BkAM31D_23875	PF08281	Sigma-70, region 4
BkAM31D_23875	PF04542	Sigma-70 region 2 
BkAM31D_23890	PF07883	Cupin domain
BkAM31D_23905	PF13426	PAS domain
BkAM31D_23905	PF02954	Bacterial regulatory protein, Fis family
BkAM31D_23905	PF00158	Sigma-54 interaction domain
BkAM31D_23910	PF08240	Alcohol dehydrogenase GroES-like domain
BkAM31D_23910	PF00107	Zinc-binding dehydrogenase
BkAM31D_23915	PF00171	Aldehyde dehydrogenase family
BkAM31D_23920	PF00579	tRNA synthetases class I (W and Y)
BkAM31D_23930	PF03471	Transporter associated domain
BkAM31D_23930	PF00571	CBS domain
BkAM31D_23930	PF01595	Cyclin M transmembrane N-terminal domain
BkAM31D_23940	PF00072	Response regulator receiver domain
BkAM31D_23940	PF00486	Transcriptional regulatory protein, C terminal
BkAM31D_23945	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_23950	PF00005	ABC transporter
BkAM31D_23960	PF07969	Amidohydrolase family
BkAM31D_23980	PF09587	Bacterial capsule synthesis protein PGA_cap
BkAM31D_24015	PF01061	ABC-2 type transporter
BkAM31D_24020	PF00440	Bacterial regulatory proteins, tetR family
BkAM31D_24020	PF17932	Tetracyclin repressor-like, C-terminal domain
BkAM31D_24025	PF00989	PAS fold
BkAM31D_24025	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_24025	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_24025	PF16736	Single Cache-like 
BkAM31D_24030	PF00486	Transcriptional regulatory protein, C terminal
BkAM31D_24030	PF00072	Response regulator receiver domain
BkAM31D_24040	PF07563	Protein of unknown function (DUF1541)
BkAM31D_24045	PF00072	Response regulator receiver domain
BkAM31D_24045	PF00990	Diguanylate cyclase, GGDEF domain
BkAM31D_24050	PF17248	Family of unknown function (DUF5317)
BkAM31D_24100	PF04203	Sortase domain
BkAM31D_24110	PF08447	PAS fold
BkAM31D_24110	PF00989	PAS fold
BkAM31D_24110	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_24110	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_24140	PF12729	Four helix bundle sensory module for signal transduction
BkAM31D_24140	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BkAM31D_24140	PF00672	HAMP domain
BkAM31D_24180	PF03845	Spore germination protein
BkAM31D_24185	PF03323	Bacillus/Clostridium GerA spore germination protein
BkAM31D_24195	PF07690	Major Facilitator Superfamily
BkAM31D_24260	PF02525	Flavodoxin-like fold
BkAM31D_24270	PF00873	AcrB/AcrD/AcrF family
BkAM31D_24280	PF07977	FabA-like domain
BkAM31D_24290	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BkAM31D_24290	PF00460	Flagella basal body rod protein
BkAM31D_24295	PF00460	Flagella basal body rod protein
BkAM31D_24295	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BkAM31D_24305	PF12116	Stage III sporulation protein D
BkAM31D_24310	PF11490	DNA polymerase III polC-type N-terminus II
BkAM31D_24310	PF14579	Helix-hairpin-helix motif
BkAM31D_24310	PF07733	Bacterial DNA polymerase III alpha NTPase domain
BkAM31D_24310	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
BkAM31D_24310	PF02811	PHP domain
BkAM31D_24310	PF00929	Exonuclease
BkAM31D_24310	PF01336	OB-fold nucleic acid binding domain
BkAM31D_24315	PF00478	IMP dehydrogenase / GMP reductase domain
BkAM31D_24315	PF00571	CBS domain
BkAM31D_24320	PF00474	Sodium:solute symporter family
BkAM31D_24340	PF01551	Peptidase family M23
BkAM31D_24345	PF08486	Stage II sporulation protein
BkAM31D_24350	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
BkAM31D_24355	PF08680	TATA-box binding
BkAM31D_24360	PF06612	Protein of unknown function (DUF1146)
BkAM31D_24365	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
BkAM31D_24365	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
BkAM31D_24435	PF00464	Serine hydroxymethyltransferase
BkAM31D_24440	PF04260	Protein of unknown function (DUF436) 
BkAM31D_24445	PF02502	Ribose/Galactose Isomerase
BkAM31D_24450	PF00672	HAMP domain
BkAM31D_24450	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BkAM31D_24450	PF02743	Cache domain
BkAM31D_24455	PF01451	Low molecular weight phosphotyrosine protein phosphatase
BkAM31D_24460	PF02659	Putative manganese efflux pump
BkAM31D_24465	PF03481	Putative GTP-binding controlling metal-binding
BkAM31D_24465	PF01300	Telomere recombination
BkAM31D_24475	PF09551	Stage II sporulation protein R (spore_II_R)
BkAM31D_24480	PF17827	PrmC N-terminal domain
BkAM31D_24480	PF13847	Methyltransferase domain
BkAM31D_24485	PF00472	RF-1 domain
BkAM31D_24485	PF03462	PCRF domain
BkAM31D_24490	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BkAM31D_24490	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BkAM31D_24510	PF01479	S4 domain
BkAM31D_24510	PF00579	tRNA synthetases class I (W and Y)
BkAM31D_24520	PF01047	MarR family
BkAM31D_24525	PF00005	ABC transporter
BkAM31D_24530	PF00005	ABC transporter
BkAM31D_24540	PF02653	Branched-chain amino acid transport system / permease component
BkAM31D_24550	PF00547	Urease, gamma subunit
BkAM31D_24555	PF00699	Urease beta subunit
BkAM31D_24560	PF00449	Urease alpha-subunit, N-terminal domain
BkAM31D_24560	PF01979	Amidohydrolase family
BkAM31D_24565	PF05194	UreE urease accessory protein, C-terminal domain
BkAM31D_24565	PF02814	UreE urease accessory protein, N-terminal domain
BkAM31D_24570	PF01730	UreF
BkAM31D_24575	PF02492	CobW/HypB/UreG, nucleotide-binding domain
BkAM31D_24580	PF01774	UreD urease accessory protein
BkAM31D_24585	PF00265	Thymidine kinase
BkAM31D_24590	PF01197	Ribosomal protein L31
BkAM31D_24595	PF07497	Rho termination factor, RNA-binding domain
BkAM31D_24595	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BkAM31D_24595	PF07498	Rho termination factor, N-terminal domain
BkAM31D_24600	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
BkAM31D_24605	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
BkAM31D_24610	PF00923	Transaldolase/Fructose-6-phosphate aldolase
BkAM31D_24615	PF01116	Fructose-bisphosphate aldolase class-II
BkAM31D_24620	PF00072	Response regulator receiver domain
BkAM31D_24630	PF00117	Glutamine amidotransferase class-I
BkAM31D_24630	PF06418	CTP synthase N-terminus
BkAM31D_24635	PF05066	HB1, ASXL, restriction endonuclease HTH domain
BkAM31D_24640	PF02310	B12 binding domain
BkAM31D_24640	PF01642	Methylmalonyl-CoA mutase
BkAM31D_24650	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BkAM31D_24650	PF02770	Acyl-CoA dehydrogenase, middle domain
BkAM31D_24650	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BkAM31D_24655	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BkAM31D_24655	PF02770	Acyl-CoA dehydrogenase, middle domain
BkAM31D_24655	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BkAM31D_24660	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
BkAM31D_24660	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
BkAM31D_24665	PF02803	Thiolase, C-terminal domain
BkAM31D_24665	PF00108	Thiolase, N-terminal domain
BkAM31D_24670	PF02754	Cysteine-rich domain
BkAM31D_24670	PF13183	4Fe-4S dicluster domain
BkAM31D_24675	PF13091	PLD-like domain
BkAM31D_24680	PF12697	Alpha/beta hydrolase family
BkAM31D_24690	PF04306	Protein of unknown function (DUF456)
BkAM31D_24695	PF03485	Arginyl tRNA synthetase N terminal domain
BkAM31D_24695	PF05746	DALR anticodon binding domain
BkAM31D_24695	PF00750	tRNA synthetases class I (R)
BkAM31D_24705	PF17284	Spermidine synthase tetramerisation domain
BkAM31D_24710	PF00905	Penicillin binding protein transpeptidase domain
BkAM31D_24710	PF00912	Transglycosylase
BkAM31D_24715	PF08741	YwhD family
BkAM31D_24725	PF01966	HD domain
BkAM31D_24730	PF07293	Protein of unknown function (DUF1450)
BkAM31D_24735	PF03099	Biotin/lipoate A/B protein ligase family
BkAM31D_24740	PF01515	Phosphate acetyl/butaryl transferase
BkAM31D_24745	PF00378	Enoyl-CoA hydratase/isomerase
BkAM31D_24755	PF07486	Cell Wall Hydrolase
BkAM31D_24760	PF09671	Spore coat protein (Spore_GerQ)
BkAM31D_24765	PF04241	Protein of unknown function (DUF423)
BkAM31D_24775	PF13411	MerR HTH family regulatory protein
BkAM31D_24780	PF00929	Exonuclease
BkAM31D_24780	PF14579	Helix-hairpin-helix motif
BkAM31D_24780	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
BkAM31D_24780	PF07733	Bacterial DNA polymerase III alpha NTPase domain
BkAM31D_24780	PF11490	DNA polymerase III polC-type N-terminus II
BkAM31D_24780	PF14480	DNA polymerase III polC-type N-terminus I
BkAM31D_24780	PF02811	PHP domain
BkAM31D_24790	PF00909	Ammonium Transporter Family
BkAM31D_24795	PF03167	Uracil DNA glycosylase superfamily
BkAM31D_24800	PF02378	Phosphotransferase system, EIIC 
BkAM31D_24800	PF00367	phosphotransferase system, EIIB
BkAM31D_24805	PF12833	Helix-turn-helix domain
BkAM31D_24825	PF13419	Haloacid dehalogenase-like hydrolase
BkAM31D_24830	PF00892	EamA-like transporter family
BkAM31D_24835	PF03951	Glutamine synthetase, beta-Grasp domain
BkAM31D_24835	PF00120	Glutamine synthetase, catalytic domain
BkAM31D_24840	PF00271	Helicase conserved C-terminal domain
BkAM31D_24840	PF00270	DEAD/DEAH box helicase
BkAM31D_24845	PF01266	FAD dependent oxidoreductase
BkAM31D_24845	PF00355	Rieske [2Fe-2S] domain
BkAM31D_24850	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
BkAM31D_24850	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BkAM31D_24855	PF01131	DNA topoisomerase
BkAM31D_24855	PF01751	Toprim domain
BkAM31D_24860	PF00893	Small Multidrug Resistance protein
BkAM31D_24865	PF00893	Small Multidrug Resistance protein
BkAM31D_24875	PF17785	PUA-like domain
BkAM31D_24875	PF10672	S-adenosylmethionine-dependent methyltransferase
BkAM31D_24885	PF12823	Domain of unknown function (DUF3817)
BkAM31D_24905	PF08671	Anti-repressor SinI
BkAM31D_24905	PF01381	Helix-turn-helix
BkAM31D_24910	PF02245	Methylpurine-DNA glycosylase (MPG)
BkAM31D_24925	PF04371	Porphyromonas-type peptidyl-arginine deiminase
BkAM31D_24930	PF03734	L,D-transpeptidase catalytic domain
BkAM31D_24940	PF08864	UPF0302 domain
BkAM31D_24940	PF08858	IDEAL domain
BkAM31D_24950	PF02600	Disulfide bond formation protein DsbB
BkAM31D_24960	PF03358	NADPH-dependent FMN reductase
BkAM31D_24975	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_24975	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_24985	PF04055	Radical SAM superfamily
BkAM31D_24990	PF07690	Major Facilitator Superfamily
BkAM31D_24995	PF13454	FAD-NAD(P)-binding
BkAM31D_25000	PF05525	Branched-chain amino acid transport protein
BkAM31D_25005	PF04239	Protein of unknown function (DUF421)
BkAM31D_25010	PF01381	Helix-turn-helix
BkAM31D_25010	PF08671	Anti-repressor SinI
BkAM31D_25015	PF01235	Sodium:alanine symporter family
BkAM31D_25020	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
BkAM31D_25020	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
BkAM31D_25025	PF01168	Alanine racemase, N-terminal domain
BkAM31D_25025	PF00842	Alanine racemase, C-terminal domain
BkAM31D_25035	PF00440	Bacterial regulatory proteins, tetR family
BkAM31D_25040	PF02028	BCCT, betaine/carnitine/choline family transporter
BkAM31D_25045	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BkAM31D_25050	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BkAM31D_25050	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BkAM31D_25050	PF01842	ACT domain
BkAM31D_25055	PF07475	HPr Serine kinase C-terminal domain
BkAM31D_25055	PF02603	HPr Serine kinase N terminus
BkAM31D_25065	PF06039	Malate:quinone oxidoreductase (Mqo)
BkAM31D_25075	PF03466	LysR substrate binding domain
BkAM31D_25075	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BkAM31D_25085	PF00155	Aminotransferase class I and II
BkAM31D_25095	PF13649	Methyltransferase domain
BkAM31D_25100	PF07722	Peptidase C26
BkAM31D_25125	PF01032	FecCD transport family
BkAM31D_25130	PF00005	ABC transporter
BkAM31D_25140	PF01479	S4 domain
BkAM31D_25140	PF00849	RNA pseudouridylate synthase
BkAM31D_25155	PF03992	Antibiotic biosynthesis monooxygenase
BkAM31D_25160	PF00005	ABC transporter
BkAM31D_25165	PF01032	FecCD transport family
BkAM31D_25170	PF01032	FecCD transport family
BkAM31D_25175	PF01497	Periplasmic binding protein
BkAM31D_25180	PF02590	Predicted SPOUT methyltransferase
BkAM31D_25190	PF13180	PDZ domain
BkAM31D_25195	PF00753	Metallo-beta-lactamase superfamily
BkAM31D_25205	PF07435	YycH protein
BkAM31D_25210	PF00672	HAMP domain
BkAM31D_25210	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BkAM31D_25210	PF13426	PAS domain
BkAM31D_25210	PF00512	His Kinase A (phospho-acceptor) domain
BkAM31D_25215	PF00486	Transcriptional regulatory protein, C terminal
BkAM31D_25215	PF00072	Response regulator receiver domain
BkAM31D_25220	PF10145	Phage-related minor tail protein
BkAM31D_25220	PF01551	Peptidase family M23
BkAM31D_25220	PF01464	Transglycosylase SLT domain
BkAM31D_25250	PF00709	Adenylosuccinate synthetase
BkAM31D_25255	PF00772	DnaB-like helicase N terminal domain
BkAM31D_25255	PF03796	DnaB-like helicase C terminal domain
BkAM31D_25260	PF03948	Ribosomal protein L9, C-terminal domain
BkAM31D_25260	PF01281	Ribosomal protein L9, N-terminal domain
BkAM31D_25265	PF02272	DHHA1 domain
BkAM31D_25265	PF01368	DHH family
BkAM31D_25270	PF09991	Predicted membrane protein (DUF2232)
BkAM31D_25275	PF02447	GntP family permease
BkAM31D_25280	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BkAM31D_25280	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
BkAM31D_25285	PF01380	SIS domain
BkAM31D_25285	PF01418	Helix-turn-helix domain, rpiR family
BkAM31D_25290	PF01084	Ribosomal protein S18
BkAM31D_25295	PF00436	Single-strand binding protein family
BkAM31D_25300	PF01250	Ribosomal protein S6
BkAM31D_25305	PF01926	50S ribosome-binding GTPase
BkAM31D_25305	PF06071	Protein of unknown function (DUF933)
BkAM31D_25310	PF06107	Bacterial protein of unknown function (DUF951)
BkAM31D_25320	PF06866	Protein of unknown function (DUF1256)
BkAM31D_25330	PF00266	Aminotransferase class-V
BkAM31D_25335	PF02195	ParB-like nuclease domain
BkAM31D_25335	PF17762	HTH domain found in ParB protein
BkAM31D_25340	PF13614	AAA domain
BkAM31D_25345	PF17762	HTH domain found in ParB protein
BkAM31D_25345	PF02195	ParB-like nuclease domain
BkAM31D_25350	PF02527	rRNA small subunit methyltransferase G
BkAM31D_25355	PF13932	GidA associated domain
BkAM31D_25355	PF01134	Glucose inhibited division protein A
BkAM31D_25360	PF01926	50S ribosome-binding GTPase
BkAM31D_25360	PF12631	MnmE helical domain
BkAM31D_25360	PF10396	GTP-binding protein TrmE N-terminus
BkAM31D_25365	PF01424	R3H domain
BkAM31D_25365	PF14804	Jag N-terminus
BkAM31D_25370	PF02096	60Kd inner membrane protein
BkAM31D_25375	PF00825	Ribonuclease P
BkAM31D_25380	PF00468	Ribosomal protein L34
