locus-tag class description CPQ91_00005 PF11638 DnaA N-terminal domain CPQ91_00005 PF08299 Bacterial dnaA protein helix-turn-helix CPQ91_00005 PF00308 Bacterial dnaA protein CPQ91_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CPQ91_00010 PF02767 DNA polymerase III beta subunit, central domain CPQ91_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CPQ91_00020 PF02463 RecF/RecN/SMC N terminal domain CPQ91_00025 PF04025 Domain of unknown function (DUF370) CPQ91_00030 PF01751 Toprim domain CPQ91_00030 PF00986 DNA gyrase B subunit, carboxyl terminus CPQ91_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_00030 PF00204 DNA gyrase B CPQ91_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller CPQ91_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A CPQ91_00065 PF14175 YaaC-like Protein CPQ91_00070 PF00478 IMP dehydrogenase / GMP reductase domain CPQ91_00070 PF00571 CBS domain CPQ91_00075 PF00768 D-alanyl-D-alanine carboxypeptidase CPQ91_00075 PF07943 Penicillin-binding protein 5, C-terminal domain CPQ91_00080 PF01680 SOR/SNZ family CPQ91_00085 PF01174 SNO glutamine amidotransferase family CPQ91_00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPQ91_00090 PF02403 Seryl-tRNA synthetase N-terminal domain CPQ91_00095 PF02595 Glycerate kinase family CPQ91_00100 PF02447 GntP family permease CPQ91_00105 PF05651 Putative sugar diacid recognition CPQ91_00105 PF17853 GGDEF-like domain CPQ91_00105 PF13556 PucR C-terminal helix-turn-helix domain CPQ91_00120 PF01712 Deoxynucleoside kinase CPQ91_00125 PF01712 Deoxynucleoside kinase CPQ91_00130 PF00704 Glycosyl hydrolases family 18 CPQ91_00130 PF01476 LysM domain CPQ91_00135 PF00857 Isochorismatase family CPQ91_00140 PF14437 MafB19-like deaminase CPQ91_00150 PF12169 DNA polymerase III subunits gamma and tau domain III CPQ91_00155 PF02575 YbaB/EbfC DNA-binding family CPQ91_00160 PF13662 Toprim domain CPQ91_00160 PF02132 RecR protein CPQ91_00165 PF10704 Protein of unknown function (DUF2508) CPQ91_00170 PF07441 SigmaK-factor processing regulatory protein BofA CPQ91_00200 PF10764 Inhibitor of sigma-G Gin CPQ91_00205 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein CPQ91_00210 PF05816 Toxic anion resistance protein (TelA) CPQ91_00215 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CPQ91_00215 PF01276 Orn/Lys/Arg decarboxylase, major domain CPQ91_00220 PF02223 Thymidylate kinase CPQ91_00225 PF06153 Cyclic-di-AMP receptor CPQ91_00230 PF03885 Protein of unknown function (DUF327) CPQ91_00235 PF09115 DNA polymerase III, delta subunit, C terminal CPQ91_00240 PF04468 PSP1 C-terminal conserved region CPQ91_00245 PF06156 Initiation control protein YabA CPQ91_00250 PF05175 Methyltransferase small domain CPQ91_00255 PF01541 GIY-YIG catalytic domain CPQ91_00260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPQ91_00265 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CPQ91_00265 PF18277 AbrB C-terminal domain CPQ91_00270 PF08264 Anticodon-binding domain of tRNA CPQ91_00270 PF09334 tRNA synthetases class I (M) CPQ91_00270 PF01588 Putative tRNA binding domain CPQ91_00275 PF01026 TatD related DNase CPQ91_00280 PF07501 G5 domain CPQ91_00280 PF03990 G5-linked-Ubiquitin-like domain CPQ91_00280 PF06725 3D domain CPQ91_00285 PF13331 Domain of unknown function (DUF4093) CPQ91_00285 PF13662 Toprim domain CPQ91_00290 PF00398 Ribosomal RNA adenine dimethylase CPQ91_00295 PF05582 YabG peptidase U57 CPQ91_00300 PF06257 Biofilm formation stimulator VEG CPQ91_00305 PF00269 Small, acid-soluble spore proteins, alpha/beta type CPQ91_00310 PF08544 GHMP kinases C terminal CPQ91_00310 PF00288 GHMP kinases N terminal domain CPQ91_00315 PF09182 Bacterial purine repressor, N-terminal CPQ91_00315 PF00156 Phosphoribosyl transferase domain CPQ91_00320 PF01042 Endoribonuclease L-PSP CPQ91_00325 PF04026 SpoVG CPQ91_00330 PF00483 Nucleotidyl transferase CPQ91_00330 PF00132 Bacterial transferase hexapeptide (six repeats) CPQ91_00335 PF14572 Phosphoribosyl synthetase-associated domain CPQ91_00335 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CPQ91_00340 PF14693 Ribosomal protein TL5, C-terminal domain CPQ91_00340 PF01386 Ribosomal L25p family CPQ91_00345 PF01195 Peptidyl-tRNA hydrolase CPQ91_00350 PF10955 Protein of unknown function (DUF2757) CPQ91_00355 PF17757 UvrB interaction domain CPQ91_00355 PF03461 TRCF domain CPQ91_00355 PF00271 Helicase conserved C-terminal domain CPQ91_00355 PF00270 DEAD/DEAH box helicase CPQ91_00355 PF02559 CarD-like/TRCF domain CPQ91_00360 PF15714 Stage V sporulation protein T C-terminal, transcription factor CPQ91_00360 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CPQ91_00365 PF01943 Polysaccharide biosynthesis protein CPQ91_00365 PF14667 Polysaccharide biosynthesis C-terminal domain CPQ91_00370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPQ91_00370 PF03819 MazG nucleotide pyrophosphohydrolase domain CPQ91_00375 PF01479 S4 domain CPQ91_00380 PF07873 YabP family CPQ91_00385 PF09578 Spore cortex protein YabQ (Spore_YabQ) CPQ91_00390 PF04977 Septum formation initiator CPQ91_00395 PF00575 S1 RNA binding domain CPQ91_00410 PF07228 Stage II sporulation protein E (SpoIIE) CPQ91_00415 PF00092 von Willebrand factor type A domain CPQ91_00420 PF00069 Protein kinase domain CPQ91_00425 PF11734 TilS substrate C-terminal domain CPQ91_00425 PF09179 TilS substrate binding domain CPQ91_00425 PF01171 PP-loop family CPQ91_00435 PF00004 ATPase family associated with various cellular activities (AAA) CPQ91_00435 PF17862 AAA+ lid domain CPQ91_00435 PF06480 FtsH Extracellular CPQ91_00435 PF01434 Peptidase family M41 CPQ91_00440 PF03309 Type III pantothenate kinase CPQ91_00445 PF01430 Hsp33 protein CPQ91_00450 PF13145 PPIC-type PPIASE domain CPQ91_00455 PF00291 Pyridoxal-phosphate dependent enzyme CPQ91_00465 PF04715 Anthranilate synthase component I, N terminal region CPQ91_00465 PF00425 chorismate binding enzyme CPQ91_00470 PF00117 Glutamine amidotransferase class-I CPQ91_00475 PF01063 Amino-transferase class IV CPQ91_00480 PF00809 Pterin binding enzyme CPQ91_00485 PF02152 Dihydroneopterin aldolase CPQ91_00490 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CPQ91_00495 PF01381 Helix-turn-helix CPQ91_00500 PF01207 Dihydrouridine synthase (Dus) CPQ91_00505 PF00152 tRNA synthetases class II (D, K and N) CPQ91_00505 PF01336 OB-fold nucleic acid binding domain CPQ91_00585 PF17727 CtsR C-terminal dimerization domain CPQ91_00585 PF05848 CtsR N-terminal HTH domain CPQ91_00590 PF02151 UvrB/uvrC motif CPQ91_00595 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CPQ91_00600 PF10431 C-terminal, D2-small domain, of ClpB protein CPQ91_00600 PF02861 Clp amino terminal domain, pathogenicity island component CPQ91_00600 PF07724 AAA domain (Cdc48 subfamily) CPQ91_00600 PF17871 AAA lid domain CPQ91_00600 PF00004 ATPase family associated with various cellular activities (AAA) CPQ91_00605 PF18073 Rubredoxin metal binding domain CPQ91_00610 PF10635 DisA bacterial checkpoint controller linker region CPQ91_00610 PF02457 DisA bacterial checkpoint controller nucleotide-binding CPQ91_00620 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CPQ91_00625 PF02542 YgbB family CPQ91_00630 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPQ91_00635 PF00132 Bacterial transferase hexapeptide (six repeats) CPQ91_00640 PF09190 DALR domain CPQ91_00640 PF01406 tRNA synthetases class I (C) catalytic domain CPQ91_00645 PF00636 Ribonuclease III domain CPQ91_00650 PF00588 SpoU rRNA Methylase family CPQ91_00650 PF08032 RNA 2'-O ribose methyltransferase substrate binding CPQ91_00655 PF05991 YacP-like NYN domain CPQ91_00660 PF04542 Sigma-70 region 2 CPQ91_00660 PF08281 Sigma-70, region 4 CPQ91_00665 PF00471 Ribosomal protein L33 CPQ91_00670 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CPQ91_00675 PF00467 KOW motif CPQ91_00675 PF02357 Transcription termination factor nusG CPQ91_00680 PF03946 Ribosomal protein L11, N-terminal domain CPQ91_00680 PF00298 Ribosomal protein L11, RNA binding domain CPQ91_00685 PF00687 Ribosomal protein L1p/L10e family CPQ91_00690 PF00466 Ribosomal protein L10 CPQ91_00695 PF00542 Ribosomal protein L7/L12 C-terminal domain CPQ91_00695 PF16320 Ribosomal protein L7/L12 dimerisation domain CPQ91_00700 PF05175 Methyltransferase small domain CPQ91_00705 PF04565 RNA polymerase Rpb2, domain 3 CPQ91_00705 PF10385 RNA polymerase beta subunit external 1 domain CPQ91_00705 PF04560 RNA polymerase Rpb2, domain 7 CPQ91_00705 PF00562 RNA polymerase Rpb2, domain 6 CPQ91_00705 PF04561 RNA polymerase Rpb2, domain 2 CPQ91_00705 PF04563 RNA polymerase beta subunit CPQ91_00710 PF05000 RNA polymerase Rpb1, domain 4 CPQ91_00710 PF04983 RNA polymerase Rpb1, domain 3 CPQ91_00710 PF04998 RNA polymerase Rpb1, domain 5 CPQ91_00710 PF00623 RNA polymerase Rpb1, domain 2 CPQ91_00710 PF04997 RNA polymerase Rpb1, domain 1 CPQ91_00715 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CPQ91_00720 PF00164 Ribosomal protein S12/S23 CPQ91_00725 PF00177 Ribosomal protein S7p/S5e CPQ91_00730 PF00679 Elongation factor G C-terminus CPQ91_00730 PF03144 Elongation factor Tu domain 2 CPQ91_00730 PF14492 Elongation Factor G, domain II CPQ91_00730 PF03764 Elongation factor G, domain IV CPQ91_00730 PF00009 Elongation factor Tu GTP binding domain CPQ91_00735 PF03143 Elongation factor Tu C-terminal domain CPQ91_00735 PF03144 Elongation factor Tu domain 2 CPQ91_00735 PF00009 Elongation factor Tu GTP binding domain CPQ91_00740 PF00338 Ribosomal protein S10p/S20e CPQ91_00745 PF00297 Ribosomal protein L3 CPQ91_00750 PF00573 Ribosomal protein L4/L1 family CPQ91_00755 PF00276 Ribosomal protein L23 CPQ91_00760 PF00181 Ribosomal Proteins L2, RNA binding domain CPQ91_00760 PF03947 Ribosomal Proteins L2, C-terminal domain CPQ91_00765 PF00203 Ribosomal protein S19 CPQ91_00770 PF00237 Ribosomal protein L22p/L17e CPQ91_00775 PF07650 KH domain CPQ91_00775 PF00189 Ribosomal protein S3, C-terminal domain CPQ91_00780 PF00252 Ribosomal protein L16p/L10e CPQ91_00785 PF00831 Ribosomal L29 protein CPQ91_00790 PF00366 Ribosomal protein S17 CPQ91_00795 PF00238 Ribosomal protein L14p/L23e CPQ91_00800 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CPQ91_00800 PF00467 KOW motif CPQ91_00805 PF00673 ribosomal L5P family C-terminus CPQ91_00805 PF00281 Ribosomal protein L5 CPQ91_00810 PF00253 Ribosomal protein S14p/S29e CPQ91_00815 PF00410 Ribosomal protein S8 CPQ91_00820 PF00347 Ribosomal protein L6 CPQ91_00825 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CPQ91_00830 PF03719 Ribosomal protein S5, C-terminal domain CPQ91_00830 PF00333 Ribosomal protein S5, N-terminal domain CPQ91_00835 PF00327 Ribosomal protein L30p/L7e CPQ91_00840 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CPQ91_00845 PF00344 SecY translocase CPQ91_00850 PF05191 Adenylate kinase, active site lid CPQ91_00855 PF00557 Metallopeptidase family M24 CPQ91_00865 PF01176 Translation initiation factor 1A / IF-1 CPQ91_00870 PF00444 Ribosomal protein L36 CPQ91_00875 PF00416 Ribosomal protein S13/S18 CPQ91_00880 PF00411 Ribosomal protein S11 CPQ91_00885 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CPQ91_00885 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CPQ91_00885 PF01000 RNA polymerase Rpb3/RpoA insert domain CPQ91_00890 PF01196 Ribosomal protein L17 CPQ91_00895 PF00005 ABC transporter CPQ91_00900 PF00005 ABC transporter CPQ91_00905 PF02361 Cobalt transport protein CPQ91_00910 PF01416 tRNA pseudouridine synthase CPQ91_00915 PF00572 Ribosomal protein L13 CPQ91_00920 PF00380 Ribosomal protein S9/S16 CPQ91_00925 PF05163 DinB family CPQ91_00930 PF10730 Protein of unknown function (DUF2521) CPQ91_00935 PF01520 N-acetylmuramoyl-L-alanine amidase CPQ91_00940 PF10609 NUBPL iron-transfer P-loop NTPase CPQ91_00945 PF17898 Spore germination GerD central core domain CPQ91_00950 PF14089 KinB-signalling pathway activation in sporulation CPQ91_00955 PF01522 Polysaccharide deacetylase CPQ91_00985 PF00144 Beta-lactamase CPQ91_00995 PF01758 Sodium Bile acid symporter family CPQ91_01000 PF17369 Family of unknown function (DUF5391) CPQ91_01010 PF07075 Protein of unknown function (DUF1343) CPQ91_01015 PF01915 Glycosyl hydrolase family 3 C-terminal domain CPQ91_01015 PF00933 Glycosyl hydrolase family 3 N terminal domain CPQ91_01020 PF00144 Beta-lactamase CPQ91_01025 PF00367 phosphotransferase system, EIIB CPQ91_01025 PF02378 Phosphotransferase system, EIIC CPQ91_01030 PF01380 SIS domain CPQ91_01030 PF01418 Helix-turn-helix domain, rpiR family CPQ91_01035 PF01380 SIS domain CPQ91_01040 PF04463 Protein of unknown function (DUF523) CPQ91_01070 PF00491 Arginase family CPQ91_01075 PF04542 Sigma-70 region 2 CPQ91_01075 PF08281 Sigma-70, region 4 CPQ91_01080 PF13490 Putative zinc-finger CPQ91_01085 PF02457 DisA bacterial checkpoint controller nucleotide-binding CPQ91_01090 PF07949 YbbR-like protein CPQ91_01095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPQ91_01095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPQ91_01095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPQ91_01095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPQ91_01100 PF01380 SIS domain CPQ91_01115 PF00005 ABC transporter CPQ91_01120 PF00392 Bacterial regulatory proteins, gntR family CPQ91_01130 PF07690 Major Facilitator Superfamily CPQ91_01140 PF00005 ABC transporter CPQ91_01140 PF00664 ABC transporter transmembrane region CPQ91_01145 PF01323 DSBA-like thioredoxin domain CPQ91_01160 PF04439 Streptomycin adenylyltransferase CPQ91_01170 PF13419 Haloacid dehalogenase-like hydrolase CPQ91_01175 PF00324 Amino acid permease CPQ91_01180 PF03600 Citrate transporter CPQ91_01185 PF03401 Tripartite tricarboxylate transporter family receptor CPQ91_01190 PF08279 HTH domain CPQ91_01190 PF12431 Transcriptional regulator CPQ91_01190 PF00072 Response regulator receiver domain CPQ91_01195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_01195 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CPQ91_01200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPQ91_01200 PF03466 LysR substrate binding domain CPQ91_01210 PF07690 Major Facilitator Superfamily CPQ91_01215 PF17334 Minor curli fiber component A CPQ91_01220 PF17340 Family of unknown function (DUF5370) CPQ91_01230 PF03190 Protein of unknown function, DUF255 CPQ91_01240 PF07690 Major Facilitator Superfamily CPQ91_01260 PF02690 Na+/Pi-cotransporter CPQ91_01265 PF05360 yiaA/B two helix domain CPQ91_01290 PF00892 EamA-like transporter family CPQ91_01295 PF12833 Helix-turn-helix domain CPQ91_01295 PF02311 AraC-like ligand binding domain CPQ91_01315 PF00465 Iron-containing alcohol dehydrogenase CPQ91_01325 PF13407 Periplasmic binding protein domain CPQ91_01345 PF10710 Protein of unknown function (DUF2512) CPQ91_01350 PF00324 Amino acid permease CPQ91_01355 PF02574 Homocysteine S-methyltransferase CPQ91_01360 PF04794 YdjC-like protein CPQ91_01365 PF02378 Phosphotransferase system, EIIC CPQ91_01365 PF00367 phosphotransferase system, EIIB CPQ91_01365 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CPQ91_01370 PF07739 TipAS antibiotic-recognition domain CPQ91_01370 PF13411 MerR HTH family regulatory protein CPQ91_01375 PF04239 Protein of unknown function (DUF421) CPQ91_01380 PF00132 Bacterial transferase hexapeptide (six repeats) CPQ91_01390 PF10990 Protein of unknown function (DUF2809) CPQ91_01395 PF01235 Sodium:alanine symporter family CPQ91_01400 PF04960 Glutaminase CPQ91_01405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_01410 PF08664 YcbB domain CPQ91_01410 PF00072 Response regulator receiver domain CPQ91_01415 PF13302 Acetyltransferase (GNAT) domain CPQ91_01420 PF05569 BlaR1 peptidase M56 CPQ91_01420 PF00905 Penicillin binding protein transpeptidase domain CPQ91_01425 PF03965 Penicillinase repressor CPQ91_01435 PF16655 PhoD-like phosphatase, N-terminal domain CPQ91_01435 PF09423 PhoD-like phosphatase CPQ91_01440 PF02416 mttA/Hcf106 family CPQ91_01445 PF00902 Sec-independent protein translocase protein (TatC) CPQ91_01450 PF00701 Dihydrodipicolinate synthetase family CPQ91_01455 PF00171 Aldehyde dehydrogenase family CPQ91_01460 PF07690 Major Facilitator Superfamily CPQ91_01465 PF13378 Enolase C-terminal domain-like CPQ91_01470 PF07729 FCD domain CPQ91_01470 PF00392 Bacterial regulatory proteins, gntR family CPQ91_01475 PF08666 SAF domain CPQ91_01475 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CPQ91_01485 PF00512 His Kinase A (phospho-acceptor) domain CPQ91_01485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_01490 PF00005 ABC transporter CPQ91_01505 PF13037 Domain of unknown function (DUF3898) CPQ91_01505 PF13039 Protein of unknown function (DUF3900) CPQ91_01510 PF16226 Domain of unknown function (DUF4885) CPQ91_01515 PF01636 Phosphotransferase enzyme family CPQ91_01520 PF01047 MarR family CPQ91_01525 PF00501 AMP-binding enzyme CPQ91_01525 PF13193 AMP-binding enzyme C-terminal domain CPQ91_01545 PF13411 MerR HTH family regulatory protein CPQ91_01545 PF07739 TipAS antibiotic-recognition domain CPQ91_01555 PF13847 Methyltransferase domain CPQ91_01555 PF03551 Transcriptional regulator PadR-like family CPQ91_01565 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein CPQ91_01570 PF00892 EamA-like transporter family CPQ91_01575 PF06271 RDD family CPQ91_01580 PF02810 SEC-C motif CPQ91_01580 PF05225 helix-turn-helix, Psq domain CPQ91_01585 PF00005 ABC transporter CPQ91_01600 PF00486 Transcriptional regulatory protein, C terminal CPQ91_01600 PF00072 Response regulator receiver domain CPQ91_01605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_01605 PF00512 His Kinase A (phospho-acceptor) domain CPQ91_01610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPQ91_01610 PF03466 LysR substrate binding domain CPQ91_01615 PF14552 Tautomerase enzyme CPQ91_01630 PF11611 Domain of unknown function (DUF4352) CPQ91_01630 PF17118 Domain of unknown function (DUF5105) CPQ91_01635 PF03606 C4-dicarboxylate anaerobic carrier CPQ91_01640 PF01546 Peptidase family M20/M25/M40 CPQ91_01640 PF07687 Peptidase dimerisation domain CPQ91_01645 PF00583 Acetyltransferase (GNAT) family CPQ91_01650 PF01425 Amidase CPQ91_01655 PF01432 Peptidase family M3 CPQ91_01655 PF08439 Oligopeptidase F CPQ91_01660 PF04226 Transglycosylase associated protein CPQ91_01670 PF02754 Cysteine-rich domain CPQ91_01670 PF13183 4Fe-4S dicluster domain CPQ91_01675 PF01565 FAD binding domain CPQ91_01675 PF02913 FAD linked oxidases, C-terminal domain CPQ91_01680 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPQ91_01685 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CPQ91_01690 PF02378 Phosphotransferase system, EIIC CPQ91_01695 PF02056 Family 4 glycosyl hydrolase CPQ91_01695 PF11975 Family 4 glycosyl hydrolase C-terminal domain CPQ91_01705 PF04794 YdjC-like protein CPQ91_01710 PF00041 Fibronectin type III domain CPQ91_01710 PF00704 Glycosyl hydrolases family 18 CPQ91_01715 PF06483 Chitinase C CPQ91_01715 PF00704 Glycosyl hydrolases family 18 CPQ91_01720 PF00089 Trypsin CPQ91_01735 PF16244 Domain of unknown function (DUF4901) CPQ91_01740 PF00581 Rhodanese-like domain CPQ91_01745 PF07486 Cell Wall Hydrolase CPQ91_01750 PF00296 Luciferase-like monooxygenase CPQ91_01755 PF00877 NlpC/P60 family CPQ91_01770 PF00440 Bacterial regulatory proteins, tetR family CPQ91_01770 PF17932 Tetracyclin repressor-like, C-terminal domain CPQ91_01790 PF02342 TerD domain CPQ91_01795 PF02342 TerD domain CPQ91_01800 PF02342 TerD domain CPQ91_01805 PF03741 Integral membrane protein TerC family CPQ91_01820 PF14266 Putative component of 'biosynthetic module' CPQ91_01825 PF05816 Toxic anion resistance protein (TelA) CPQ91_01830 PF02683 Cytochrome C biogenesis protein transmembrane region CPQ91_01840 PF13411 MerR HTH family regulatory protein CPQ91_01845 PF07690 Major Facilitator Superfamily CPQ91_01850 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CPQ91_01850 PF00056 lactate/malate dehydrogenase, NAD binding domain CPQ91_01855 PF02652 L-lactate permease CPQ91_01860 PF01810 LysE type translocator CPQ91_01865 PF00324 Amino acid permease CPQ91_01870 PF02540 NAD synthase CPQ91_01875 PF01202 Shikimate kinase CPQ91_01880 PF10127 RNA repair pathway DNA polymerase beta family CPQ91_01885 PF01619 Proline dehydrogenase CPQ91_01890 PF00171 Aldehyde dehydrogenase family CPQ91_01895 PF00474 Sodium:solute symporter family CPQ91_01900 PF13556 PucR C-terminal helix-turn-helix domain CPQ91_01900 PF17853 GGDEF-like domain CPQ91_01905 PF09323 Domain of unknown function (DUF1980) CPQ91_01910 PF03773 Predicted permease CPQ91_01915 PF05448 Acetyl xylan esterase (AXE1) CPQ91_01935 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_01940 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPQ91_01945 PF02525 Flavodoxin-like fold CPQ91_01955 PF00232 Glycosyl hydrolase family 1 CPQ91_01960 PF11033 Competence protein J (ComJ) CPQ91_01965 PF14040 Deoxyribonuclease NucA/NucB CPQ91_01970 PF00069 Protein kinase domain CPQ91_01980 PF04740 LXG domain of WXG superfamily CPQ91_01985 PF01968 Hydantoinase/oxoprolinase CPQ91_01985 PF05378 Hydantoinase/oxoprolinase N-terminal region CPQ91_01990 PF02538 Hydantoinase B/oxoprolinase CPQ91_02000 PF08402 TOBE domain CPQ91_02000 PF00005 ABC transporter CPQ91_02005 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_02010 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_02015 PF00550 Phosphopantetheine attachment site CPQ91_02015 PF13193 AMP-binding enzyme C-terminal domain CPQ91_02015 PF00668 Condensation domain CPQ91_02015 PF00501 AMP-binding enzyme CPQ91_02020 PF00550 Phosphopantetheine attachment site CPQ91_02020 PF00668 Condensation domain CPQ91_02020 PF13193 AMP-binding enzyme C-terminal domain CPQ91_02020 PF00501 AMP-binding enzyme CPQ91_02025 PF00550 Phosphopantetheine attachment site CPQ91_02025 PF00668 Condensation domain CPQ91_02025 PF13193 AMP-binding enzyme C-terminal domain CPQ91_02025 PF00501 AMP-binding enzyme CPQ91_02025 PF00975 Thioesterase domain CPQ91_02030 PF00975 Thioesterase domain CPQ91_02040 PF00392 Bacterial regulatory proteins, gntR family CPQ91_02040 PF00155 Aminotransferase class I and II CPQ91_02045 PF01648 4'-phosphopantetheinyl transferase superfamily CPQ91_02050 PF00756 Putative esterase CPQ91_02070 PF00005 ABC transporter CPQ91_02090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPQ91_02090 PF00672 HAMP domain CPQ91_02095 PF00005 ABC transporter CPQ91_02100 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_02105 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPQ91_02110 PF00158 Sigma-54 interaction domain CPQ91_02110 PF13426 PAS domain CPQ91_02110 PF02954 Bacterial regulatory protein, Fis family CPQ91_02115 PF00202 Aminotransferase class-III CPQ91_02120 PF00324 Amino acid permease CPQ91_02125 PF00491 Arginase family CPQ91_02130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPQ91_02130 PF03466 LysR substrate binding domain CPQ91_02135 PF02441 Flavoprotein CPQ91_02140 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CPQ91_02190 PF14449 Pre-toxin TG CPQ91_02190 PF04740 LXG domain of WXG superfamily CPQ91_02210 PF00672 HAMP domain CPQ91_02210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_02210 PF06580 Histidine kinase CPQ91_02210 PF02743 Cache domain CPQ91_02215 PF00072 Response regulator receiver domain CPQ91_02215 PF12833 Helix-turn-helix domain CPQ91_02220 PF13407 Periplasmic binding protein domain CPQ91_02225 PF00005 ABC transporter CPQ91_02230 PF02653 Branched-chain amino acid transport system / permease component CPQ91_02235 PF07690 Major Facilitator Superfamily CPQ91_02240 PF00583 Acetyltransferase (GNAT) family CPQ91_02240 PF01047 MarR family CPQ91_02245 PF08532 Beta-galactosidase trimerisation domain CPQ91_02245 PF08533 Beta-galactosidase C-terminal domain CPQ91_02245 PF02449 Beta-galactosidase CPQ91_02255 PF02333 Phytase CPQ91_02260 PF00854 POT family CPQ91_02265 PF12708 Pectate lyase superfamily protein CPQ91_02265 PF13229 Right handed beta helix region CPQ91_02275 PF03323 Bacillus/Clostridium GerA spore germination protein CPQ91_02280 PF05504 Spore germination B3/ GerAC like, C-terminal CPQ91_02285 PF03845 Spore germination protein CPQ91_02290 PF07739 TipAS antibiotic-recognition domain CPQ91_02290 PF13411 MerR HTH family regulatory protein CPQ91_02295 PF00005 ABC transporter CPQ91_02300 PF12704 MacB-like periplasmic core domain CPQ91_02300 PF02687 FtsX-like permease family CPQ91_02305 PF00486 Transcriptional regulatory protein, C terminal CPQ91_02305 PF00072 Response regulator receiver domain CPQ91_02310 PF00672 HAMP domain CPQ91_02310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_02310 PF00512 His Kinase A (phospho-acceptor) domain CPQ91_02320 PF00696 Amino acid kinase family CPQ91_02320 PF13840 ACT domain CPQ91_02325 PF01032 FecCD transport family CPQ91_02330 PF01032 FecCD transport family CPQ91_02335 PF00005 ABC transporter CPQ91_02340 PF01497 Periplasmic binding protein CPQ91_02345 PF07690 Major Facilitator Superfamily CPQ91_02350 PF00440 Bacterial regulatory proteins, tetR family CPQ91_02360 PF00881 Nitroreductase family CPQ91_02365 PF03992 Antibiotic biosynthesis monooxygenase CPQ91_02370 PF01022 Bacterial regulatory protein, arsR family CPQ91_02375 PF00155 Aminotransferase class I and II CPQ91_02375 PF00392 Bacterial regulatory proteins, gntR family CPQ91_02380 PF00202 Aminotransferase class-III CPQ91_02385 PF13520 Amino acid permease CPQ91_02390 PF00171 Aldehyde dehydrogenase family CPQ91_02395 PF00892 EamA-like transporter family CPQ91_02405 PF07987 Domain of unkown function (DUF1775) CPQ91_02410 PF13115 YtkA-like CPQ91_02410 PF05425 Copper resistance protein D CPQ91_02410 PF04234 CopC domain CPQ91_02415 PF08220 DeoR-like helix-turn-helix domain CPQ91_02415 PF05573 NosL CPQ91_02420 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CPQ91_02420 PF18267 Rubredoxin NAD+ reductase C-terminal domain CPQ91_02420 PF04324 BFD-like [2Fe-2S] binding domain CPQ91_02420 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPQ91_02425 PF01568 Molydopterin dinucleotide binding domain CPQ91_02425 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPQ91_02425 PF00384 Molybdopterin oxidoreductase CPQ91_02430 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CPQ91_02430 PF18267 Rubredoxin NAD+ reductase C-terminal domain CPQ91_02430 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CPQ91_02430 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPQ91_02430 PF04324 BFD-like [2Fe-2S] binding domain CPQ91_02435 PF00355 Rieske [2Fe-2S] domain CPQ91_02440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPQ91_02445 PF00392 Bacterial regulatory proteins, gntR family CPQ91_02445 PF07729 FCD domain CPQ91_02450 PF00939 Sodium:sulfate symporter transmembrane region CPQ91_02455 PF07977 FabA-like domain CPQ91_02460 PF07977 FabA-like domain CPQ91_02465 PF01980 tRNA-methyltransferase O CPQ91_02475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPQ91_02490 PF00456 Transketolase, thiamine diphosphate binding domain CPQ91_02495 PF02780 Transketolase, C-terminal domain CPQ91_02495 PF02779 Transketolase, pyrimidine binding domain CPQ91_02505 PF03746 LamB/YcsF family CPQ91_02510 PF01566 Natural resistance-associated macrophage protein CPQ91_02515 PF07286 Protein of unknown function (DUF1445) CPQ91_02520 PF02682 Carboxyltransferase domain, subdomain C and D CPQ91_02525 PF02626 Carboxyltransferase domain, subdomain A and B CPQ91_02530 PF01614 Bacterial transcriptional regulator CPQ91_02530 PF09339 IclR helix-turn-helix domain CPQ91_02535 PF13472 GDSL-like Lipase/Acylhydrolase family CPQ91_02540 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPQ91_02540 PF02378 Phosphotransferase system, EIIC CPQ91_02545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPQ91_02550 PF01232 Mannitol dehydrogenase Rossmann domain CPQ91_02550 PF08125 Mannitol dehydrogenase C-terminal domain CPQ91_02555 PF08279 HTH domain CPQ91_02555 PF05043 Mga helix-turn-helix domain CPQ91_02555 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPQ91_02555 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPQ91_02555 PF00874 PRD domain CPQ91_02575 PF16242 Pyridoxamine 5'-phosphate oxidase like CPQ91_02580 PF10997 Alternate to MurJ CPQ91_02585 PF03816 Cell envelope-related transcriptional attenuator domain CPQ91_02590 PF12823 Domain of unknown function (DUF3817) CPQ91_02600 PF01037 Lrp/AsnC ligand binding domain CPQ91_02605 PF01131 DNA topoisomerase CPQ91_02605 PF01751 Toprim domain CPQ91_02610 PF13520 Amino acid permease CPQ91_02615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CPQ91_02615 PF00205 Thiamine pyrophosphate enzyme, central domain CPQ91_02615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPQ91_02620 PF18416 N-acetylglucosamine binding protein domain 2 CPQ91_02620 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CPQ91_02630 PF13302 Acetyltransferase (GNAT) domain CPQ91_02635 PF01566 Natural resistance-associated macrophage protein CPQ91_02640 PF04226 Transglycosylase associated protein CPQ91_02645 PF10415 Fumarase C C-terminus CPQ91_02645 PF00206 Lyase CPQ91_02650 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CPQ91_02655 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) CPQ91_02660 PF12787 EcsC protein family CPQ91_02670 PF07883 Cupin domain CPQ91_02680 PF01594 AI-2E family transporter CPQ91_02685 PF00375 Sodium:dicarboxylate symporter family CPQ91_02690 PF00005 ABC transporter CPQ91_02705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPQ91_02705 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CPQ91_02705 PF02770 Acyl-CoA dehydrogenase, middle domain CPQ91_02710 PF13040 Fur-regulated basic protein B CPQ91_02720 PF00085 Thioredoxin CPQ91_02725 PF01820 D-ala D-ala ligase N-terminus CPQ91_02725 PF07478 D-ala D-ala ligase C-terminus CPQ91_02730 PF01225 Mur ligase family, catalytic domain CPQ91_02730 PF02875 Mur ligase family, glutamate ligase domain CPQ91_02730 PF08245 Mur ligase middle domain CPQ91_02735 PF12146 Serine aminopeptidase, S33 CPQ91_02740 PF00270 DEAD/DEAH box helicase CPQ91_02740 PF00271 Helicase conserved C-terminal domain CPQ91_02745 PF03703 Bacterial PH domain CPQ91_02750 PF03703 Bacterial PH domain CPQ91_02755 PF01694 Rhomboid family CPQ91_02765 PF00842 Alanine racemase, C-terminal domain CPQ91_02765 PF01168 Alanine racemase, N-terminal domain CPQ91_02770 PF01402 Ribbon-helix-helix protein, copG family CPQ91_02775 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CPQ91_02780 PF08678 Rsbr N terminal CPQ91_02780 PF01740 STAS domain CPQ91_02785 PF01740 STAS domain CPQ91_02790 PF13581 Histidine kinase-like ATPase domain CPQ91_02795 PF07228 Stage II sporulation protein E (SpoIIE) CPQ91_02795 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain CPQ91_02800 PF01740 STAS domain CPQ91_02805 PF13581 Histidine kinase-like ATPase domain CPQ91_02810 PF04542 Sigma-70 region 2 CPQ91_02810 PF04539 Sigma-70 region 3 CPQ91_02810 PF04545 Sigma-70, region 4 CPQ91_02815 PF07228 Stage II sporulation protein E (SpoIIE) CPQ91_02820 PF17674 HHH domain CPQ91_02820 PF09371 Tex-like protein N-terminal domain CPQ91_02820 PF00575 S1 RNA binding domain CPQ91_02820 PF16921 Tex protein YqgF-like domain CPQ91_02825 PF00440 Bacterial regulatory proteins, tetR family CPQ91_02830 PF03176 MMPL family CPQ91_02840 PF10263 SprT-like family CPQ91_02885 PF01381 Helix-turn-helix CPQ91_02890 PF00487 Fatty acid desaturase CPQ91_02895 PF00313 'Cold-shock' DNA-binding domain CPQ91_02900 PF00107 Zinc-binding dehydrogenase CPQ91_02900 PF08240 Alcohol dehydrogenase GroES-like domain CPQ91_02915 PF01047 MarR family CPQ91_02920 PF00583 Acetyltransferase (GNAT) family CPQ91_02925 PF04299 Putative FMN-binding domain CPQ91_02935 PF01638 HxlR-like helix-turn-helix CPQ91_02940 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CPQ91_02940 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CPQ91_02950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPQ91_02950 PF03466 LysR substrate binding domain CPQ91_02965 PF04199 Putative cyclase CPQ91_02970 PF00324 Amino acid permease CPQ91_02985 PF08281 Sigma-70, region 4 CPQ91_02985 PF04542 Sigma-70 region 2 CPQ91_02990 PF13739 Deacetylase PdaC CPQ91_02990 PF11738 Protein of unknown function (DUF3298) CPQ91_02995 PF01757 Acyltransferase family CPQ91_03000 PF07690 Major Facilitator Superfamily CPQ91_03005 PF06580 Histidine kinase CPQ91_03005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_03010 PF00072 Response regulator receiver domain CPQ91_03010 PF04397 LytTr DNA-binding domain CPQ91_03015 PF17961 Bacterial Ig domain CPQ91_03015 PF17210 SdrD B-like domain CPQ91_03015 PF04650 YSIRK type signal peptide CPQ91_03015 PF10425 C-terminus of bacterial fibrinogen-binding adhesin CPQ91_03015 PF00746 LPXTG cell wall anchor motif CPQ91_03020 PF04203 Sortase domain CPQ91_03025 PF00083 Sugar (and other) transporter CPQ91_03065 PF02769 AIR synthase related protein, C-terminal domain CPQ91_03065 PF00586 AIR synthase related protein, N-terminal domain CPQ91_03070 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CPQ91_03075 PF00814 Glycoprotease family CPQ91_03080 PF00583 Acetyltransferase (GNAT) family CPQ91_03085 PF00814 Glycoprotease family CPQ91_03090 PF16326 ABC transporter C-terminal domain CPQ91_03090 PF12848 ABC transporter CPQ91_03090 PF00005 ABC transporter CPQ91_03095 PF01967 MoaC family CPQ91_03100 PF06971 Putative DNA-binding protein N-terminus CPQ91_03100 PF02629 CoA binding domain CPQ91_03105 PF02416 mttA/Hcf106 family CPQ91_03110 PF00902 Sec-independent protein translocase protein (TatC) CPQ91_03115 PF14146 Domain of unknown function (DUF4305) CPQ91_03120 PF02517 CPBP intramembrane metalloprotease CPQ91_03125 PF00166 Chaperonin 10 Kd subunit CPQ91_03130 PF00118 TCP-1/cpn60 chaperonin family CPQ91_03155 PF08863 YolD-like protein CPQ91_03165 PF04294 VanW like protein CPQ91_03170 PF10787 Uncharacterised protein from bacillus cereus group CPQ91_03180 PF02586 SOS response associated peptidase (SRAP) CPQ91_03190 PF00440 Bacterial regulatory proteins, tetR family CPQ91_03190 PF17933 Tetracyclin repressor-like, C-terminal domain CPQ91_03195 PF00391 PEP-utilising enzyme, mobile domain CPQ91_03195 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CPQ91_03205 PF04343 Protein of unknown function, DUF488 CPQ91_03210 PF00106 short chain dehydrogenase CPQ91_03215 PF00135 Carboxylesterase family CPQ91_03220 PF07690 Major Facilitator Superfamily CPQ91_03225 PF04012 PspA/IM30 family CPQ91_03230 PF08271 TFIIB zinc-binding CPQ91_03235 PF04536 TPM domain CPQ91_03240 PF13421 SPFH domain-Band 7 family CPQ91_03250 PF01978 Sugar-specific transcriptional regulator TrmB CPQ91_03250 PF11495 Archaeal transcriptional regulator TrmB CPQ91_03255 PF01810 LysE type translocator CPQ91_03260 PF06803 Protein of unknown function (DUF1232) CPQ91_03265 PF01098 Cell cycle protein CPQ91_03270 PF01098 Cell cycle protein CPQ91_03295 PF01522 Polysaccharide deacetylase CPQ91_03295 PF11738 Protein of unknown function (DUF3298) CPQ91_03295 PF13739 Deacetylase PdaC CPQ91_03300 PF00128 Alpha amylase, catalytic domain CPQ91_03300 PF09154 Domain of unknown function (DUF1939) CPQ91_03305 PF00356 Bacterial regulatory proteins, lacI family CPQ91_03310 PF02903 Alpha amylase, N-terminal ig-like domain CPQ91_03310 PF00128 Alpha amylase, catalytic domain CPQ91_03315 PF13416 Bacterial extracellular solute-binding protein CPQ91_03320 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_03325 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_03330 PF06691 Protein of unknown function (DUF1189) CPQ91_03335 PF03632 Glycosyl hydrolase family 65 central catalytic domain CPQ91_03335 PF03633 Glycosyl hydrolase family 65, C-terminal domain CPQ91_03335 PF03636 Glycosyl hydrolase family 65, N-terminal domain CPQ91_03340 PF16657 Maltogenic Amylase, C-terminal domain CPQ91_03340 PF00128 Alpha amylase, catalytic domain CPQ91_03345 PF13419 Haloacid dehalogenase-like hydrolase CPQ91_03350 PF00579 tRNA synthetases class I (W and Y) CPQ91_03350 PF01479 S4 domain CPQ91_03355 PF01047 MarR family CPQ91_03370 PF03330 Lytic transglycolase CPQ91_03375 PF07676 WD40-like Beta Propeller Repeat CPQ91_03380 PF13170 Protein of unknown function (DUF4003) CPQ91_03395 PF10502 Signal peptidase, peptidase S26 CPQ91_03405 PF13460 NAD(P)H-binding CPQ91_03410 PF12833 Helix-turn-helix domain CPQ91_03415 PF07731 Multicopper oxidase CPQ91_03415 PF07732 Multicopper oxidase CPQ91_03415 PF00394 Multicopper oxidase CPQ91_03430 PF01545 Cation efflux family CPQ91_03430 PF16916 Dimerisation domain of Zinc Transporter CPQ91_03435 PF17863 AAA lid domain CPQ91_03435 PF07726 ATPase family associated with various cellular activities (AAA) CPQ91_03440 PF01882 Protein of unknown function DUF58 CPQ91_03445 PF11992 Domain of unknown function (DUF3488) CPQ91_03445 PF13559 Domain of unknown function (DUF4129) CPQ91_03445 PF01841 Transglutaminase-like superfamily CPQ91_03450 PF02540 NAD synthase CPQ91_03450 PF00958 GMP synthase C terminal domain CPQ91_03450 PF00117 Glutamine amidotransferase class-I CPQ91_03460 PF00860 Permease family CPQ91_03470 PF13076 Fur-regulated basic protein A CPQ91_03475 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CPQ91_03480 PF14044 NETI protein CPQ91_03485 PF00731 AIR carboxylase CPQ91_03490 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CPQ91_03490 PF02222 ATP-grasp domain CPQ91_03495 PF00206 Lyase CPQ91_03495 PF10397 Adenylosuccinate lyase C-terminus CPQ91_03500 PF01259 SAICAR synthetase CPQ91_03505 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CPQ91_03515 PF02769 AIR synthase related protein, C-terminal domain CPQ91_03515 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CPQ91_03515 PF00586 AIR synthase related protein, N-terminal domain CPQ91_03520 PF00156 Phosphoribosyl transferase domain CPQ91_03525 PF00586 AIR synthase related protein, N-terminal domain CPQ91_03525 PF02769 AIR synthase related protein, C-terminal domain CPQ91_03530 PF00551 Formyl transferase CPQ91_03535 PF02142 MGS-like domain CPQ91_03535 PF01808 AICARFT/IMPCHase bienzyme CPQ91_03540 PF02844 Phosphoribosylglycinamide synthetase, N domain CPQ91_03540 PF02843 Phosphoribosylglycinamide synthetase, C domain CPQ91_03540 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CPQ91_03550 PF00067 Cytochrome P450 CPQ91_03565 PF11127 Protein of unknown function (DUF2892) CPQ91_03570 PF13382 Adenine deaminase C-terminal domain CPQ91_03570 PF01979 Amidohydrolase family CPQ91_03575 PF11258 Protein of unknown function (DUF3048) N-terminal domain CPQ91_03575 PF17479 Protein of unknown function (DUF3048) C-terminal domain CPQ91_03580 PF01371 Trp repressor protein CPQ91_03585 PF01884 PcrB family CPQ91_03590 PF00580 UvrD/REP helicase N-terminal domain CPQ91_03590 PF13361 UvrD-like helicase C-terminal domain CPQ91_03595 PF12826 Helix-hairpin-helix motif CPQ91_03595 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CPQ91_03595 PF01653 NAD-dependent DNA ligase adenylation domain CPQ91_03595 PF00533 BRCA1 C Terminus (BRCT) domain CPQ91_03595 PF03120 NAD-dependent DNA ligase OB-fold domain CPQ91_03600 PF07537 CamS sex pheromone cAM373 precursor CPQ91_03605 PF14502 Helix-turn-helix domain CPQ91_03605 PF14503 YhfZ C-terminal domain CPQ91_03615 PF10941 Protein of unknown function DUF2620 CPQ91_03620 PF10797 Protein of unknown function CPQ91_03625 PF02126 Phosphotriesterase family CPQ91_03630 PF00155 Aminotransferase class I and II CPQ91_03635 PF01676 Metalloenzyme superfamily CPQ91_03640 PF01168 Alanine racemase, N-terminal domain CPQ91_03645 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CPQ91_03650 PF02308 MgtC family CPQ91_03655 PF00474 Sodium:solute symporter family CPQ91_03660 PF02686 Glu-tRNAGln amidotransferase C subunit CPQ91_03665 PF01425 Amidase CPQ91_03670 PF02637 GatB domain CPQ91_03670 PF02934 GatB/GatE catalytic domain CPQ91_03685 PF02156 Glycosyl hydrolase family 26 CPQ91_03690 PF00440 Bacterial regulatory proteins, tetR family CPQ91_03695 PF00873 AcrB/AcrD/AcrF family CPQ91_03705 PF13302 Acetyltransferase (GNAT) domain CPQ91_03710 PF01156 Inosine-uridine preferring nucleoside hydrolase CPQ91_03715 PF00781 Diacylglycerol kinase catalytic domain CPQ91_03720 PF05958 tRNA (Uracil-5-)-methyltransferase CPQ91_03720 PF01938 TRAM domain CPQ91_03725 PF00145 C-5 cytosine-specific DNA methylase CPQ91_03730 PF00145 C-5 cytosine-specific DNA methylase CPQ91_03735 PF07728 AAA domain (dynein-related subfamily) CPQ91_03745 PF18801 response regulator aspartate phosphatase H, N terminal CPQ91_03760 PF00072 Response regulator receiver domain CPQ91_03760 PF12833 Helix-turn-helix domain CPQ91_03775 PF00892 EamA-like transporter family CPQ91_03780 PF00155 Aminotransferase class I and II CPQ91_03780 PF00392 Bacterial regulatory proteins, gntR family CPQ91_03785 PF00892 EamA-like transporter family CPQ91_03790 PF01709 Transcriptional regulator CPQ91_03795 PF01381 Helix-turn-helix CPQ91_03805 PF00171 Aldehyde dehydrogenase family CPQ91_03810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPQ91_03815 PF00939 Sodium:sulfate symporter transmembrane region CPQ91_03820 PF00005 ABC transporter CPQ91_03820 PF12848 ABC transporter CPQ91_03820 PF16326 ABC transporter C-terminal domain CPQ91_03830 PF02649 Type I GTP cyclohydrolase folE2 CPQ91_03845 PF02492 CobW/HypB/UreG, nucleotide-binding domain CPQ91_03845 PF07683 Cobalamin synthesis protein cobW C-terminal domain CPQ91_03850 PF03744 6-carboxyhexanoate--CoA ligase CPQ91_03855 PF00202 Aminotransferase class-III CPQ91_03860 PF00155 Aminotransferase class I and II CPQ91_03870 PF06968 Biotin and Thiamin Synthesis associated domain CPQ91_03870 PF04055 Radical SAM superfamily CPQ91_03875 PF00067 Cytochrome P450 CPQ91_03885 PF13411 MerR HTH family regulatory protein CPQ91_03890 PF07690 Major Facilitator Superfamily CPQ91_03900 PF12848 ABC transporter CPQ91_03900 PF00005 ABC transporter CPQ91_03905 PF00271 Helicase conserved C-terminal domain CPQ91_03905 PF00270 DEAD/DEAH box helicase CPQ91_03910 PF16884 N-terminal domain of oxidoreductase CPQ91_03910 PF00107 Zinc-binding dehydrogenase CPQ91_03915 PF11486 Protein of unknown function (DUF3212) CPQ91_03920 PF11181 Heat induced stress protein YflT CPQ91_03925 PF00939 Sodium:sulfate symporter transmembrane region CPQ91_03940 PF00753 Metallo-beta-lactamase superfamily CPQ91_03950 PF02898 Nitric oxide synthase, oxygenase domain CPQ91_03955 PF07853 Protein of unknown function (DUF1648) CPQ91_03955 PF13630 SdpI/YhfL protein family CPQ91_03960 PF01022 Bacterial regulatory protein, arsR family CPQ91_03965 PF00708 Acylphosphatase CPQ91_03970 PF03475 3-alpha domain CPQ91_03970 PF03473 MOSC domain CPQ91_03975 PF11121 Protein of unknown function (DUF2639) CPQ91_03985 PF00557 Metallopeptidase family M24 CPQ91_03990 PF00884 Sulfatase CPQ91_03995 PF09350 Domain of unknown function (DUF1992) CPQ91_04000 PF01235 Sodium:alanine symporter family CPQ91_04005 PF02378 Phosphotransferase system, EIIC CPQ91_04005 PF00367 phosphotransferase system, EIIB CPQ91_04010 PF16657 Maltogenic Amylase, C-terminal domain CPQ91_04010 PF00128 Alpha amylase, catalytic domain CPQ91_04015 PF07702 UTRA domain CPQ91_04015 PF00392 Bacterial regulatory proteins, gntR family CPQ91_04040 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CPQ91_04045 PF00132 Bacterial transferase hexapeptide (six repeats) CPQ91_04060 PF00535 Glycosyl transferase family 2 CPQ91_04065 PF00535 Glycosyl transferase family 2 CPQ91_04065 PF13181 Tetratricopeptide repeat CPQ91_04070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CPQ91_04075 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CPQ91_04075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CPQ91_04080 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CPQ91_04080 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CPQ91_04080 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CPQ91_04090 PF01638 HxlR-like helix-turn-helix CPQ91_04095 PF00881 Nitroreductase family CPQ91_04100 PF00149 Calcineurin-like phosphoesterase CPQ91_04100 PF02872 5'-nucleotidase, C-terminal domain CPQ91_04105 PF01965 DJ-1/PfpI family CPQ91_04110 PF06569 Protein of unknown function (DUF1128) CPQ91_04115 PF01235 Sodium:alanine symporter family CPQ91_04120 PF01451 Low molecular weight phosphotyrosine protein phosphatase CPQ91_04130 PF03631 Virulence factor BrkB CPQ91_04135 PF07690 Major Facilitator Superfamily CPQ91_04145 PF01699 Sodium/calcium exchanger protein CPQ91_04150 PF14167 YfkD-like protein CPQ91_04155 PF04055 Radical SAM superfamily CPQ91_04155 PF08756 YfkB-like domain CPQ91_04165 PF01522 Polysaccharide deacetylase CPQ91_04170 PF00465 Iron-containing alcohol dehydrogenase CPQ91_04180 PF01544 CorA-like Mg2+ transporter protein CPQ91_04185 PF00730 HhH-GPD superfamily base excision DNA repair protein CPQ91_04190 PF01938 TRAM domain CPQ91_04190 PF05958 tRNA (Uracil-5-)-methyltransferase CPQ91_04220 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CPQ91_04225 PF10925 Protein of unknown function (DUF2680) CPQ91_04230 PF07690 Major Facilitator Superfamily CPQ91_04235 PF00367 phosphotransferase system, EIIB CPQ91_04235 PF02378 Phosphotransferase system, EIIC CPQ91_04240 PF03123 CAT RNA binding domain CPQ91_04240 PF00874 PRD domain CPQ91_04250 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CPQ91_04255 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CPQ91_04255 PF00361 Proton-conducting membrane transporter CPQ91_04260 PF10057 Uncharacterized conserved protein (DUF2294) CPQ91_04270 PF00676 Dehydrogenase E1 component CPQ91_04275 PF02779 Transketolase, pyrimidine binding domain CPQ91_04275 PF02780 Transketolase, C-terminal domain CPQ91_04280 PF00364 Biotin-requiring enzyme CPQ91_04280 PF02817 e3 binding domain CPQ91_04280 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CPQ91_04285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPQ91_04285 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPQ91_04290 PF01590 GAF domain CPQ91_04290 PF00158 Sigma-54 interaction domain CPQ91_04290 PF02954 Bacterial regulatory protein, Fis family CPQ91_04295 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CPQ91_04300 PF11975 Family 4 glycosyl hydrolase C-terminal domain CPQ91_04300 PF02056 Family 4 glycosyl hydrolase CPQ91_04305 PF01418 Helix-turn-helix domain, rpiR family CPQ91_04305 PF01380 SIS domain CPQ91_04310 PF00367 phosphotransferase system, EIIB CPQ91_04310 PF02378 Phosphotransferase system, EIIC CPQ91_04325 PF01638 HxlR-like helix-turn-helix CPQ91_04330 PF07681 DoxX CPQ91_04335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPQ91_04340 PF04616 Glycosyl hydrolases family 43 CPQ91_04340 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CPQ91_04345 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CPQ91_04345 PF04616 Glycosyl hydrolases family 43 CPQ91_04350 PF02311 AraC-like ligand binding domain CPQ91_04350 PF12833 Helix-turn-helix domain CPQ91_04360 PF02525 Flavodoxin-like fold CPQ91_04365 PF00293 NUDIX domain CPQ91_04370 PF12867 DinB superfamily CPQ91_04375 PF12867 DinB superfamily CPQ91_04380 PF03706 Lysylphosphatidylglycerol synthase TM region CPQ91_04380 PF09924 Uncharacterised conserved protein (DUF2156) CPQ91_04385 PF02567 Phenazine biosynthesis-like protein CPQ91_04390 PF00881 Nitroreductase family CPQ91_04395 PF14151 YfhD-like protein CPQ91_04410 PF08338 Domain of unknown function (DUF1731) CPQ91_04410 PF01370 NAD dependent epimerase/dehydratase family CPQ91_04415 PF02631 RecX family CPQ91_04420 PF08838 Protein of unknown function (DUF1811) CPQ91_04430 PF08176 Small acid-soluble spore protein K family CPQ91_04435 PF14043 WVELL protein CPQ91_04445 PF00535 Glycosyl transferase family 2 CPQ91_04455 PF09586 Bacterial membrane protein YfhO CPQ91_04460 PF04307 LexA-binding, inner membrane-associated putative hydrolase CPQ91_04465 PF00730 HhH-GPD superfamily base excision DNA repair protein CPQ91_04465 PF14815 NUDIX domain CPQ91_04485 PF14182 YgaB-like protein CPQ91_04490 PF04167 Protein of unknown function (DUF402) CPQ91_04495 PF00664 ABC transporter transmembrane region CPQ91_04495 PF00005 ABC transporter CPQ91_04500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CPQ91_04500 PF00005 ABC transporter CPQ91_04505 PF00005 ABC transporter CPQ91_04505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CPQ91_04510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CPQ91_04525 PF06081 Aromatic acid exporter family member 1 CPQ91_04530 PF00202 Aminotransferase class-III CPQ91_04535 PF00578 AhpC/TSA family CPQ91_04540 PF01475 Ferric uptake regulator family CPQ91_04545 PF11023 Zinc-ribbon containing domain CPQ91_04550 PF14540 Nucleotidyltransferase-like CPQ91_04550 PF18576 Helix-turn-helix domain CPQ91_04650 PF18801 response regulator aspartate phosphatase H, N terminal CPQ91_04685 PF01471 Putative peptidoglycan binding domain CPQ91_04685 PF01510 N-acetylmuramoyl-L-alanine amidase CPQ91_04695 PF14449 Pre-toxin TG CPQ91_04695 PF04740 LXG domain of WXG superfamily CPQ91_04710 PF04740 LXG domain of WXG superfamily CPQ91_04710 PF14449 Pre-toxin TG CPQ91_04715 PF18801 response regulator aspartate phosphatase H, N terminal CPQ91_04715 PF13181 Tetratricopeptide repeat CPQ91_04720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPQ91_04720 PF02824 TGS domain CPQ91_04720 PF03129 Anticodon binding domain CPQ91_04720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPQ91_04730 PF01487 Type I 3-dehydroquinase CPQ91_04735 PF13667 ThiC-associated domain CPQ91_04735 PF01964 Radical SAM ThiC family CPQ91_04740 PF00005 ABC transporter CPQ91_04745 PF09084 NMT1/THI5 like CPQ91_04750 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_04755 PF00296 Luciferase-like monooxygenase CPQ91_04765 PF01381 Helix-turn-helix CPQ91_04775 PF13732 Domain of unknown function (DUF4162) CPQ91_04775 PF00005 ABC transporter CPQ91_04795 PF00253 Ribosomal protein S14p/S29e CPQ91_04810 PF08331 Domain of unknown function (DUF1730) CPQ91_04815 PF12671 Putative amidase domain CPQ91_04820 PF00588 SpoU rRNA Methylase family CPQ91_04825 PF13171 Protein of unknown function (DUF4004) CPQ91_04830 PF04519 Polymer-forming cytoskeletal CPQ91_04840 PF06798 PrkA serine protein kinase C-terminal domain CPQ91_04840 PF08298 PrkA AAA domain CPQ91_04845 PF04285 Protein of unknown function (DUF444) CPQ91_04855 PF07690 Major Facilitator Superfamily CPQ91_04860 PF03358 NADPH-dependent FMN reductase CPQ91_04880 PF00005 ABC transporter CPQ91_04885 PF00005 ABC transporter CPQ91_04890 PF12679 ABC-2 family transporter protein CPQ91_04895 PF00313 'Cold-shock' DNA-binding domain CPQ91_04900 PF09383 NIL domain CPQ91_04900 PF00005 ABC transporter CPQ91_04905 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_04910 PF03180 NLPA lipoprotein CPQ91_04915 PF00375 Sodium:dicarboxylate symporter family CPQ91_04925 PF00326 Prolyl oligopeptidase family CPQ91_04930 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CPQ91_04940 PF07875 Coat F domain CPQ91_04945 PF13426 PAS domain CPQ91_04945 PF13188 PAS domain CPQ91_04945 PF00989 PAS fold CPQ91_04945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_04945 PF00512 His Kinase A (phospho-acceptor) domain CPQ91_04950 PF00149 Calcineurin-like phosphoesterase CPQ91_04950 PF00746 LPXTG cell wall anchor motif CPQ91_04950 PF02872 5'-nucleotidase, C-terminal domain CPQ91_04950 PF00565 Staphylococcal nuclease homologue CPQ91_04955 PF04203 Sortase domain CPQ91_04960 PF00849 RNA pseudouridylate synthase CPQ91_04960 PF01479 S4 domain CPQ91_04965 PF17326 Family of unknown function (DUF5365) CPQ91_04970 PF00571 CBS domain CPQ91_04975 PF13419 Haloacid dehalogenase-like hydrolase CPQ91_04980 PF00795 Carbon-nitrogen hydrolase CPQ91_04980 PF00583 Acetyltransferase (GNAT) family CPQ91_04985 PF12848 ABC transporter CPQ91_04985 PF00005 ABC transporter CPQ91_04985 PF16326 ABC transporter C-terminal domain CPQ91_04995 PF01226 Formate/nitrite transporter CPQ91_05000 PF03547 Membrane transport protein CPQ91_05005 PF00107 Zinc-binding dehydrogenase CPQ91_05005 PF08240 Alcohol dehydrogenase GroES-like domain CPQ91_05010 PF04309 Glycerol-3-phosphate responsive antiterminator CPQ91_05015 PF00230 Major intrinsic protein CPQ91_05020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CPQ91_05020 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CPQ91_05025 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CPQ91_05025 PF01266 FAD dependent oxidoreductase CPQ91_05030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPQ91_05030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPQ91_05030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPQ91_05030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPQ91_05045 PF07730 Histidine kinase CPQ91_05045 PF13185 GAF domain CPQ91_05050 PF00196 Bacterial regulatory proteins, luxR family CPQ91_05050 PF00072 Response regulator receiver domain CPQ91_05055 PF03358 NADPH-dependent FMN reductase CPQ91_05060 PF14148 YhdB-like protein CPQ91_05065 PF13028 Protein of unknown function (DUF3889) CPQ91_05070 PF02082 Transcriptional regulator CPQ91_05075 PF00175 Oxidoreductase NAD-binding domain CPQ91_05075 PF00042 Globin CPQ91_05075 PF00970 Oxidoreductase FAD-binding domain CPQ91_05080 PF04293 SpoVR like protein CPQ91_05085 PF01476 LysM domain CPQ91_05085 PF00877 NlpC/P60 family CPQ91_05090 PF03466 LysR substrate binding domain CPQ91_05090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPQ91_05095 PF00285 Citrate synthase, C-terminal domain CPQ91_05100 PF07995 Glucose / Sorbosone dehydrogenase CPQ91_05110 PF00209 Sodium:neurotransmitter symporter family CPQ91_05120 PF12833 Helix-turn-helix domain CPQ91_05120 PF06445 GyrI-like small molecule binding domain CPQ91_05135 PF17453 Sigma-M inhibitor CPQ91_05140 PF13791 Sigma factor regulator C-terminal CPQ91_05140 PF13800 Sigma factor regulator N-terminal CPQ91_05145 PF04542 Sigma-70 region 2 CPQ91_05145 PF08281 Sigma-70, region 4 CPQ91_05150 PF07883 Cupin domain CPQ91_05160 PF01553 Acyltransferase CPQ91_05165 PF05656 Protein of unknown function (DUF805) CPQ91_05175 PF00440 Bacterial regulatory proteins, tetR family CPQ91_05180 PF03471 Transporter associated domain CPQ91_05180 PF01595 Cyclin M transmembrane N-terminal domain CPQ91_05180 PF00571 CBS domain CPQ91_05185 PF13411 MerR HTH family regulatory protein CPQ91_05190 PF03471 Transporter associated domain CPQ91_05190 PF01595 Cyclin M transmembrane N-terminal domain CPQ91_05190 PF00571 CBS domain CPQ91_05205 PF01520 N-acetylmuramoyl-L-alanine amidase CPQ91_05205 PF05036 Sporulation related domain CPQ91_05210 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CPQ91_05215 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CPQ91_05220 PF03009 Glycerophosphoryl diester phosphodiesterase family CPQ91_05225 PF17444 Uncharacterized YhdX-like CPQ91_05230 PF00924 Mechanosensitive ion channel CPQ91_05235 PF02146 Sir2 family CPQ91_05245 PF01522 Polysaccharide deacetylase CPQ91_05250 PF01063 Amino-transferase class IV CPQ91_05255 PF03553 Na+/H+ antiporter family CPQ91_05260 PF01263 Aldose 1-epimerase CPQ91_05265 PF16302 Domain of unknown function (DUF4944) CPQ91_05285 PF00582 Universal stress protein family CPQ91_05290 PF00005 ABC transporter CPQ91_05290 PF00664 ABC transporter transmembrane region CPQ91_05295 PF00664 ABC transporter transmembrane region CPQ91_05295 PF00005 ABC transporter CPQ91_05300 PF13460 NAD(P)H-binding CPQ91_05305 PF00269 Small, acid-soluble spore proteins, alpha/beta type CPQ91_05315 PF00005 ABC transporter CPQ91_05315 PF03459 TOBE domain CPQ91_05315 PF17912 MalK OB fold domain CPQ91_05320 PF13556 PucR C-terminal helix-turn-helix domain CPQ91_05325 PF17277 Family of unknown function (DUF5342) CPQ91_05330 PF14398 YheC/D like ATP-grasp CPQ91_05335 PF14398 YheC/D like ATP-grasp CPQ91_05340 PF04286 Protein of unknown function (DUF445) CPQ91_05345 PF06133 Control of competence regulator ComK, YlbF/YmcA CPQ91_05360 PF04055 Radical SAM superfamily CPQ91_05365 PF00999 Sodium/hydrogen exchanger family CPQ91_05370 PF02080 TrkA-C domain CPQ91_05380 PF00378 Enoyl-CoA hydratase/isomerase CPQ91_05385 PF18801 response regulator aspartate phosphatase H, N terminal CPQ91_05395 PF14120 YhzD-like protein CPQ91_05400 PF13732 Domain of unknown function (DUF4162) CPQ91_05400 PF00005 ABC transporter CPQ91_05410 PF00149 Calcineurin-like phosphoesterase CPQ91_05415 PF13514 AAA domain CPQ91_05420 PF01966 HD domain CPQ91_05425 PF14147 Sporulation protein YhaL CPQ91_05435 PF09680 Family of unknown function CPQ91_05450 PF11667 Putative zincin peptidase CPQ91_05455 PF08963 Protein of unknown function (DUF1878) CPQ91_05460 PF01047 MarR family CPQ91_05465 PF12732 YtxH-like protein CPQ91_05475 PF17099 Tryptophan transporter TrpP CPQ91_05480 PF00266 Aminotransferase class-V CPQ91_05485 PF01230 HIT domain CPQ91_05495 PF00005 ABC transporter CPQ91_05500 PF05975 Bacterial ABC transporter protein EcsB CPQ91_05505 PF12787 EcsC protein family CPQ91_05510 PF07687 Peptidase dimerisation domain CPQ91_05510 PF01546 Peptidase family M20/M25/M40 CPQ91_05520 PF03992 Antibiotic biosynthesis monooxygenase CPQ91_05525 PF00912 Transglycosylase CPQ91_05525 PF00905 Penicillin binding protein transpeptidase domain CPQ91_05530 PF01208 Uroporphyrinogen decarboxylase (URO-D) CPQ91_05545 PF00440 Bacterial regulatory proteins, tetR family CPQ91_05545 PF17932 Tetracyclin repressor-like, C-terminal domain CPQ91_05555 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CPQ91_05555 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CPQ91_05560 PF05343 M42 glutamyl aminopeptidase CPQ91_05570 PF00375 Sodium:dicarboxylate symporter family CPQ91_05575 PF14149 YhfH-like protein CPQ91_05580 PF12706 Beta-lactamase superfamily domain CPQ91_05585 PF03099 Biotin/lipoate A/B protein ligase family CPQ91_05585 PF10437 Bacterial lipoate protein ligase C-terminus CPQ91_05590 PF13193 AMP-binding enzyme C-terminal domain CPQ91_05590 PF00501 AMP-binding enzyme CPQ91_05600 PF07883 Cupin domain CPQ91_05600 PF01381 Helix-turn-helix CPQ91_05615 PF16491 CAAX prenyl protease N-terminal, five membrane helices CPQ91_05615 PF01435 Peptidase family M48 CPQ91_05625 PF00892 EamA-like transporter family CPQ91_05630 PF01497 Periplasmic binding protein CPQ91_05635 PF01032 FecCD transport family CPQ91_05640 PF01032 FecCD transport family CPQ91_05645 PF00300 Histidine phosphatase superfamily (branch 1) CPQ91_05650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPQ91_05655 PF00355 Rieske [2Fe-2S] domain CPQ91_05655 PF01266 FAD dependent oxidoreductase CPQ91_05665 PF08858 IDEAL domain CPQ91_05670 PF06338 ComK protein CPQ91_05680 PF09335 SNARE associated Golgi protein CPQ91_05685 PF10502 Signal peptidase, peptidase S26 CPQ91_05690 PF00082 Subtilase family CPQ91_05700 PF07905 Purine catabolism regulatory protein-like family CPQ91_05700 PF13556 PucR C-terminal helix-turn-helix domain CPQ91_05700 PF17853 GGDEF-like domain CPQ91_05710 PF01979 Amidohydrolase family CPQ91_05720 PF07883 Cupin domain CPQ91_05720 PF05899 Protein of unknown function (DUF861) CPQ91_05725 PF02615 Malate/L-lactate dehydrogenase CPQ91_05730 PF02615 Malate/L-lactate dehydrogenase CPQ91_05735 PF02629 CoA binding domain CPQ91_05735 PF00549 CoA-ligase CPQ91_05740 PF06545 Protein of unknown function (DUF1116) CPQ91_05750 PF00696 Amino acid kinase family CPQ91_05755 PF07690 Major Facilitator Superfamily CPQ91_05760 PF10901 Protein of unknown function (DUF2690) CPQ91_05765 PF18801 response regulator aspartate phosphatase H, N terminal CPQ91_05805 PF11975 Family 4 glycosyl hydrolase C-terminal domain CPQ91_05805 PF02056 Family 4 glycosyl hydrolase CPQ91_05810 PF05145 Transition state regulatory protein AbrB CPQ91_05815 PF11007 Spore coat associated protein JA (CotJA) CPQ91_05820 PF12652 CotJB protein CPQ91_05825 PF05067 Manganese containing catalase CPQ91_05830 PF13193 AMP-binding enzyme C-terminal domain CPQ91_05830 PF00501 AMP-binding enzyme CPQ91_05835 PF07690 Major Facilitator Superfamily CPQ91_05845 PF16736 Single Cache-like CPQ91_05845 PF00989 PAS fold CPQ91_05845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_05845 PF00512 His Kinase A (phospho-acceptor) domain CPQ91_05850 PF00486 Transcriptional regulatory protein, C terminal CPQ91_05850 PF00072 Response regulator receiver domain CPQ91_05855 PF02915 Rubrerythrin CPQ91_05865 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_05870 PF12705 PD-(D/E)XK nuclease superfamily CPQ91_05875 PF00580 UvrD/REP helicase N-terminal domain CPQ91_05875 PF13361 UvrD-like helicase C-terminal domain CPQ91_05875 PF12705 PD-(D/E)XK nuclease superfamily CPQ91_05880 PF00149 Calcineurin-like phosphoesterase CPQ91_05880 PF12320 Type 5 capsule protein repressor C-terminal domain CPQ91_05885 PF13476 AAA domain CPQ91_05890 PF10676 Spore germination protein gerPA/gerPF CPQ91_05895 PF10970 Spore germination protein GerPE CPQ91_05905 PF10737 Spore germination protein GerPC CPQ91_05910 PF10803 Spore germination GerPB CPQ91_05915 PF10676 Spore germination protein gerPA/gerPF CPQ91_05920 PF12650 Domain of unknown function (DUF3784) CPQ91_05925 PF09388 Spo0E like sporulation regulatory protein CPQ91_05930 PF08757 CotH kinase protein CPQ91_05940 PF01557 Fumarylacetoacetate (FAA) hydrolase family CPQ91_05945 PF03193 RsgA GTPase CPQ91_05950 PF07457 Protein of unknown function (DUF1516) CPQ91_05955 PF10949 Protein of unknown function (DUF2777) CPQ91_05960 PF13537 Glutamine amidotransferase domain CPQ91_05960 PF00733 Asparagine synthase CPQ91_05965 PF00909 Ammonium Transporter Family CPQ91_05970 PF00543 Nitrogen regulatory protein P-II CPQ91_05975 PF01554 MatE CPQ91_05980 PF12833 Helix-turn-helix domain CPQ91_05980 PF02311 AraC-like ligand binding domain CPQ91_05990 PF00356 Bacterial regulatory proteins, lacI family CPQ91_05995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CPQ91_05995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CPQ91_06010 PF03323 Bacillus/Clostridium GerA spore germination protein CPQ91_06020 PF00392 Bacterial regulatory proteins, gntR family CPQ91_06020 PF00155 Aminotransferase class I and II CPQ91_06025 PF00202 Aminotransferase class-III CPQ91_06030 PF00282 Pyridoxal-dependent decarboxylase conserved domain CPQ91_06035 PF06276 Ferric iron reductase FhuF-like transporter CPQ91_06035 PF04183 IucA / IucC family CPQ91_06045 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CPQ91_06050 PF04183 IucA / IucC family CPQ91_06050 PF06276 Ferric iron reductase FhuF-like transporter CPQ91_06055 PF13673 Acetyltransferase (GNAT) domain CPQ91_06065 PF08279 HTH domain CPQ91_06065 PF13280 WYL domain CPQ91_06070 PF02574 Homocysteine S-methyltransferase CPQ91_06070 PF00809 Pterin binding enzyme CPQ91_06070 PF02607 B12 binding domain CPQ91_06070 PF02310 B12 binding domain CPQ91_06070 PF02965 Vitamin B12 dependent methionine synthase, activation domain CPQ91_06075 PF02574 Homocysteine S-methyltransferase CPQ91_06075 PF02219 Methylenetetrahydrofolate reductase CPQ91_06080 PF04461 Protein of unknown function (DUF520) CPQ91_06085 PF13509 S1 domain CPQ91_06085 PF17783 CvfB-like winged helix domain CPQ91_06100 PF02645 Uncharacterised protein, DegV family COG1307 CPQ91_06105 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CPQ91_06105 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CPQ91_06110 PF12690 Intracellular proteinase inhibitor CPQ91_06115 PF00478 IMP dehydrogenase / GMP reductase domain CPQ91_06120 PF12758 Protein of unknown function (DUF3813) CPQ91_06130 PF00326 Prolyl oligopeptidase family CPQ91_06135 PF01883 Iron-sulfur cluster assembly protein CPQ91_06145 PF02774 Semialdehyde dehydrogenase, dimerisation domain CPQ91_06145 PF01118 Semialdehyde dehydrogenase, NAD binding domain CPQ91_06150 PF01960 ArgJ family CPQ91_06155 PF00696 Amino acid kinase family CPQ91_06160 PF00202 Aminotransferase class-III CPQ91_06165 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CPQ91_06165 PF00117 Glutamine amidotransferase class-I CPQ91_06170 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPQ91_06170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPQ91_06175 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPQ91_06175 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPQ91_06180 PF02673 Bacitracin resistance protein BacA CPQ91_06185 PF14168 YjzC-like protein CPQ91_06205 PF02608 ABC transporter substrate-binding protein PnrA-like CPQ91_06210 PF10815 ComZ CPQ91_06220 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CPQ91_06220 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CPQ91_06225 PF02801 Beta-ketoacyl synthase, C-terminal domain CPQ91_06225 PF00109 Beta-ketoacyl synthase, N-terminal domain CPQ91_06230 PF10026 Predicted Zn-dependent protease (DUF2268) CPQ91_06235 PF00005 ABC transporter CPQ91_06235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CPQ91_06240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CPQ91_06240 PF00005 ABC transporter CPQ91_06245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CPQ91_06250 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_06255 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_06255 PF12911 N-terminal TM domain of oligopeptide transport permease C CPQ91_06265 PF02441 Flavoprotein CPQ91_06275 PF12227 Protein of unknown function (DUF3603) CPQ91_06280 PF00579 tRNA synthetases class I (W and Y) CPQ91_06290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CPQ91_06295 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_06300 PF12911 N-terminal TM domain of oligopeptide transport permease C CPQ91_06300 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_06305 PF00005 ABC transporter CPQ91_06305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CPQ91_06310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CPQ91_06310 PF00005 ABC transporter CPQ91_06315 PF13508 Acetyltransferase (GNAT) domain CPQ91_06320 PF03960 ArsC family CPQ91_06325 PF03741 Integral membrane protein TerC family CPQ91_06330 PF05389 Negative regulator of genetic competence (MecA) CPQ91_06345 PF01970 Tripartite tricarboxylate transporter TctA family CPQ91_06350 PF00072 Response regulator receiver domain CPQ91_06350 PF12431 Transcriptional regulator CPQ91_06355 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CPQ91_06355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_06355 PF17203 Single cache domain 3 CPQ91_06355 PF00989 PAS fold CPQ91_06360 PF06054 Competence protein CoiA-like family CPQ91_06365 PF08439 Oligopeptidase F CPQ91_06365 PF01432 Peptidase family M3 CPQ91_06380 PF01152 Bacterial-like globin CPQ91_06385 PF01464 Transglycosylase SLT domain CPQ91_06390 PF01928 CYTH domain CPQ91_06400 PF04607 Region found in RelA / SpoT proteins CPQ91_06405 PF01513 ATP-NAD kinase CPQ91_06410 PF00849 RNA pseudouridylate synthase CPQ91_06415 PF00149 Calcineurin-like phosphoesterase CPQ91_06425 PF00999 Sodium/hydrogen exchanger family CPQ91_06425 PF02080 TrkA-C domain CPQ91_06425 PF02254 TrkA-N domain CPQ91_06430 PF03070 TENA/THI-4/PQQC family CPQ91_06435 PF02581 Thiamine monophosphate synthase CPQ91_06440 PF01266 FAD dependent oxidoreductase CPQ91_06445 PF02597 ThiS family CPQ91_06450 PF05690 Thiazole biosynthesis protein ThiG CPQ91_06455 PF00899 ThiF family CPQ91_06460 PF08543 Phosphomethylpyrimidine kinase CPQ91_06470 PF14153 Spore coat protein CotO CPQ91_06475 PF10612 Spore coat protein Z CPQ91_06480 PF10612 Spore coat protein Z CPQ91_06485 PF07552 Spore Coat Protein X and V domain CPQ91_06495 PF07552 Spore Coat Protein X and V domain CPQ91_06500 PF07098 Protein of unknown function (DUF1360) CPQ91_06515 PF14069 Stage VI sporulation protein F CPQ91_06520 PF00580 UvrD/REP helicase N-terminal domain CPQ91_06520 PF13361 UvrD-like helicase C-terminal domain CPQ91_06530 PF09335 SNARE associated Golgi protein CPQ91_06535 PF16363 GDP-mannose 4,6 dehydratase CPQ91_06540 PF00483 Nucleotidyl transferase CPQ91_06545 PF04138 GtrA-like protein CPQ91_06550 PF13673 Acetyltransferase (GNAT) domain CPQ91_06560 PF00756 Putative esterase CPQ91_06580 PF01053 Cys/Met metabolism PLP-dependent enzyme CPQ91_06585 PF01053 Cys/Met metabolism PLP-dependent enzyme CPQ91_06590 PF05684 Protein of unknown function (DUF819) CPQ91_06610 PF04616 Glycosyl hydrolases family 43 CPQ91_06630 PF12464 Maltose acetyltransferase CPQ91_06630 PF14602 Hexapeptide repeat of succinyl-transferase CPQ91_06640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPQ91_06640 PF03466 LysR substrate binding domain CPQ91_06645 PF00258 Flavodoxin CPQ91_06645 PF00667 FAD binding domain CPQ91_06645 PF00175 Oxidoreductase NAD-binding domain CPQ91_06650 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CPQ91_06650 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CPQ91_06655 PF03466 LysR substrate binding domain CPQ91_06655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPQ91_06660 PF00892 EamA-like transporter family CPQ91_06665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPQ91_06670 PF16800 IseA DL-endopeptidase inhibitor CPQ91_06675 PF06725 3D domain CPQ91_06675 PF01476 LysM domain CPQ91_06680 PF07690 Major Facilitator Superfamily CPQ91_06685 PF00440 Bacterial regulatory proteins, tetR family CPQ91_06700 PF04634 Protein of unknown function, DUF600 CPQ91_06705 PF04740 LXG domain of WXG superfamily CPQ91_06710 PF05908 Poly-gamma-glutamate hydrolase CPQ91_06715 PF06114 IrrE N-terminal-like domain CPQ91_06720 PF01381 Helix-turn-helix CPQ91_06740 PF01695 IstB-like ATP binding protein CPQ91_06750 PF17356 Phage-like element PBSX protein XtrA CPQ91_06755 PF08281 Sigma-70, region 4 CPQ91_06760 PF10668 Phage terminase small subunit CPQ91_06760 PF03592 Terminase small subunit CPQ91_06765 PF17288 Terminase RNAseH like domain CPQ91_06765 PF04466 Phage terminase large subunit CPQ91_06770 PF04860 Phage portal protein CPQ91_06775 PF14550 Putative phage serine protease XkdF CPQ91_06780 PF05065 Phage capsid family CPQ91_06785 PF11436 Protein of unknown function (DUF3199) CPQ91_06790 PF12206 Domain of unknown function (DUF3599) CPQ91_06795 PF04883 Bacteriophage HK97-gp10, putative tail-component CPQ91_06810 PF17481 Phage tail sheath protein beta-sandwich domain CPQ91_06810 PF04984 Phage tail sheath protein subtilisin-like domain CPQ91_06810 PF17482 Phage tail sheath C-terminal domain CPQ91_06815 PF09393 Phage tail tube protein CPQ91_06820 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC CPQ91_06830 PF01464 Transglycosylase SLT domain CPQ91_06835 PF01476 LysM domain CPQ91_06845 PF10844 Protein of unknown function (DUF2577) CPQ91_06850 PF10934 Protein of unknown function (DUF2634) CPQ91_06855 PF04865 Baseplate J-like protein CPQ91_06860 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) CPQ91_06880 PF10779 Haemolysin XhlA CPQ91_06885 PF04688 SPP1 phage holin CPQ91_06890 PF01471 Putative peptidoglycan binding domain CPQ91_06890 PF01510 N-acetylmuramoyl-L-alanine amidase CPQ91_06895 PF00392 Bacterial regulatory proteins, gntR family CPQ91_06895 PF07729 FCD domain CPQ91_06900 PF00107 Zinc-binding dehydrogenase CPQ91_06900 PF08240 Alcohol dehydrogenase GroES-like domain CPQ91_06905 PF03786 D-mannonate dehydratase (UxuA) CPQ91_06910 PF00106 short chain dehydrogenase CPQ91_06915 PF08240 Alcohol dehydrogenase GroES-like domain CPQ91_06915 PF00107 Zinc-binding dehydrogenase CPQ91_06920 PF07690 Major Facilitator Superfamily CPQ91_06925 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system CPQ91_06930 PF14171 Toxin SpoIISA, type II toxin-antitoxin system CPQ91_06935 PF01384 Phosphate transporter family CPQ91_06940 PF01865 Protein of unknown function DUF47 CPQ91_06950 PF04854 Protein of unknown function, DUF624 CPQ91_06955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_06955 PF06580 Histidine kinase CPQ91_06955 PF00672 HAMP domain CPQ91_06955 PF02743 Cache domain CPQ91_06960 PF00072 Response regulator receiver domain CPQ91_06960 PF12833 Helix-turn-helix domain CPQ91_06965 PF13416 Bacterial extracellular solute-binding protein CPQ91_06970 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_06975 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_06980 PF07470 Glycosyl Hydrolase Family 88 CPQ91_06985 PF12833 Helix-turn-helix domain CPQ91_06990 PF13472 GDSL-like Lipase/Acylhydrolase family CPQ91_06995 PF09224 Domain of unknown function (DUF1961) CPQ91_07000 PF04854 Protein of unknown function, DUF624 CPQ91_07005 PF18370 Rhamnogalacturonan I lyases beta-sheet domain CPQ91_07015 PF13472 GDSL-like Lipase/Acylhydrolase family CPQ91_07020 PF01839 FG-GAP repeat CPQ91_07020 PF18370 Rhamnogalacturonan I lyases beta-sheet domain CPQ91_07025 PF00248 Aldo/keto reductase family CPQ91_07035 PF02449 Beta-galactosidase CPQ91_07035 PF08532 Beta-galactosidase trimerisation domain CPQ91_07035 PF08533 Beta-galactosidase C-terminal domain CPQ91_07045 PF01547 Bacterial extracellular solute-binding protein CPQ91_07050 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_07055 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_07060 PF13520 Amino acid permease CPQ91_07065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPQ91_07075 PF13180 PDZ domain CPQ91_07080 PF14748 Pyrroline-5-carboxylate reductase dimerisation CPQ91_07080 PF03807 NADP oxidoreductase coenzyme F420-dependent CPQ91_07085 PF04951 D-aminopeptidase CPQ91_07090 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_07095 PF12911 N-terminal TM domain of oligopeptide transport permease C CPQ91_07095 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_07100 PF00005 ABC transporter CPQ91_07100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CPQ91_07105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CPQ91_07110 PF02016 LD-carboxypeptidase N-terminal domain CPQ91_07110 PF17676 LD-carboxypeptidase C-terminal domain CPQ91_07115 PF13378 Enolase C-terminal domain-like CPQ91_07115 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CPQ91_07120 PF00877 NlpC/P60 family CPQ91_07125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CPQ91_07125 PF00005 ABC transporter CPQ91_07140 PF04239 Protein of unknown function (DUF421) CPQ91_07145 PF00544 Pectate lyase CPQ91_07165 PF12867 DinB superfamily CPQ91_07170 PF00893 Small Multidrug Resistance protein CPQ91_07175 PF00893 Small Multidrug Resistance protein CPQ91_07180 PF00551 Formyl transferase CPQ91_07180 PF01842 ACT domain CPQ91_07185 PF01472 PUA domain CPQ91_07185 PF00696 Amino acid kinase family CPQ91_07190 PF00171 Aldehyde dehydrogenase family CPQ91_07195 PF02566 OsmC-like protein CPQ91_07205 PF01047 MarR family CPQ91_07210 PF02566 OsmC-like protein CPQ91_07220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPQ91_07225 PF00300 Histidine phosphatase superfamily (branch 1) CPQ91_07240 PF01717 Cobalamin-independent synthase, Catalytic domain CPQ91_07240 PF08267 Cobalamin-independent synthase, N-terminal domain CPQ91_07245 PF00082 Subtilase family CPQ91_07250 PF03448 MgtE intracellular N domain CPQ91_07250 PF00571 CBS domain CPQ91_07250 PF01769 Divalent cation transporter CPQ91_07260 PF00589 Phage integrase family CPQ91_07260 PF14659 Phage integrase, N-terminal SAM-like domain CPQ91_07265 PF06114 IrrE N-terminal-like domain CPQ91_07280 PF01381 Helix-turn-helix CPQ91_07295 PF03374 Phage antirepressor protein KilAC domain CPQ91_07295 PF09669 Phage regulatory protein Rha (Phage_pRha) CPQ91_07305 PF17448 Uncharacterized YqaH-like CPQ91_07335 PF01695 IstB-like ATP binding protein CPQ91_07340 PF17356 Phage-like element PBSX protein XtrA CPQ91_07360 PF05866 Endodeoxyribonuclease RusA CPQ91_07375 PF00436 Single-strand binding protein family CPQ91_07410 PF11122 Inner spore coat protein D CPQ91_07420 PF10668 Phage terminase small subunit CPQ91_07420 PF03592 Terminase small subunit CPQ91_07425 PF17288 Terminase RNAseH like domain CPQ91_07425 PF04466 Phage terminase large subunit CPQ91_07535 PF10779 Haemolysin XhlA CPQ91_07540 PF04688 SPP1 phage holin CPQ91_07545 PF01520 N-acetylmuramoyl-L-alanine amidase CPQ91_07545 PF05036 Sporulation related domain CPQ91_07555 PF14449 Pre-toxin TG CPQ91_07555 PF04740 LXG domain of WXG superfamily CPQ91_07570 PF13411 MerR HTH family regulatory protein CPQ91_07585 PF01047 MarR family CPQ91_07590 PF01068 ATP dependent DNA ligase domain CPQ91_07595 PF02735 Ku70/Ku80 beta-barrel domain CPQ91_07600 PF00990 Diguanylate cyclase, GGDEF domain CPQ91_07600 PF03707 Bacterial signalling protein N terminal repeat CPQ91_07600 PF00563 EAL domain CPQ91_07605 PF09335 SNARE associated Golgi protein CPQ91_07610 PF03741 Integral membrane protein TerC family CPQ91_07615 PF04542 Sigma-70 region 2 CPQ91_07620 PF12791 Anti-sigma factor N-terminus CPQ91_07625 PF00269 Small, acid-soluble spore proteins, alpha/beta type CPQ91_07630 PF08876 Domain of unknown function (DUF1836) CPQ91_07635 PF01435 Peptidase family M48 CPQ91_07640 PF02386 Cation transport protein CPQ91_07645 PF00905 Penicillin binding protein transpeptidase domain CPQ91_07645 PF05223 NTF2-like N-terminal transpeptidase domain CPQ91_07645 PF03717 Penicillin-binding Protein dimerisation domain CPQ91_07665 PF01757 Acyltransferase family CPQ91_07670 PF13426 PAS domain CPQ91_07670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_07670 PF13188 PAS domain CPQ91_07670 PF00989 PAS fold CPQ91_07670 PF00512 His Kinase A (phospho-acceptor) domain CPQ91_07675 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CPQ91_07675 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CPQ91_07680 PF01008 Initiation factor 2 subunit family CPQ91_07685 PF01636 Phosphotransferase enzyme family CPQ91_07690 PF00795 Carbon-nitrogen hydrolase CPQ91_07695 PF00155 Aminotransferase class I and II CPQ91_07700 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain CPQ91_07700 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain CPQ91_07705 PF00596 Class II Aldolase and Adducin N-terminal domain CPQ91_07710 PF03079 ARD/ARD' family CPQ91_07715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPQ91_07720 PF06803 Protein of unknown function (DUF1232) CPQ91_07730 PF00512 His Kinase A (phospho-acceptor) domain CPQ91_07730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_07730 PF02743 Cache domain CPQ91_07735 PF01047 MarR family CPQ91_07740 PF00691 OmpA family CPQ91_07740 PF13677 Membrane MotB of proton-channel complex MotA/MotB CPQ91_07745 PF01618 MotA/TolQ/ExbB proton channel family CPQ91_07750 PF00004 ATPase family associated with various cellular activities (AAA) CPQ91_07750 PF10431 C-terminal, D2-small domain, of ClpB protein CPQ91_07750 PF17871 AAA lid domain CPQ91_07750 PF07724 AAA domain (Cdc48 subfamily) CPQ91_07760 PF06508 Queuosine biosynthesis protein QueC CPQ91_07765 PF01242 6-pyruvoyl tetrahydropterin synthase CPQ91_07770 PF04055 Radical SAM superfamily CPQ91_07775 PF14489 QueF-like protein CPQ91_07785 PF05675 Protein of unknown function (DUF817) CPQ91_07790 PF13443 Cro/C1-type HTH DNA-binding domain CPQ91_07795 PF11188 Protein of unknown function (DUF2975) CPQ91_07820 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) CPQ91_07830 PF07486 Cell Wall Hydrolase CPQ91_07835 PF01943 Polysaccharide biosynthesis protein CPQ91_07840 PF00578 AhpC/TSA family CPQ91_07850 PF01321 Creatinase/Prolidase N-terminal domain CPQ91_07850 PF00557 Metallopeptidase family M24 CPQ91_07860 PF00356 Bacterial regulatory proteins, lacI family CPQ91_07860 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CPQ91_07865 PF00874 PRD domain CPQ91_07865 PF03123 CAT RNA binding domain CPQ91_07870 PF00367 phosphotransferase system, EIIB CPQ91_07870 PF02378 Phosphotransferase system, EIIC CPQ91_07870 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CPQ91_07875 PF00381 PTS HPr component phosphorylation site CPQ91_07880 PF00391 PEP-utilising enzyme, mobile domain CPQ91_07880 PF05524 PEP-utilising enzyme, N-terminal CPQ91_07880 PF02896 PEP-utilising enzyme, TIM barrel domain CPQ91_07885 PF11132 Transcriptional regulator protein (SplA) CPQ91_07895 PF00583 Acetyltransferase (GNAT) family CPQ91_07900 PF00672 HAMP domain CPQ91_07900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPQ91_07900 PF02743 Cache domain CPQ91_07910 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CPQ91_07910 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CPQ91_07915 PF00188 Cysteine-rich secretory protein family CPQ91_07920 PF03717 Penicillin-binding Protein dimerisation domain CPQ91_07920 PF00905 Penicillin binding protein transpeptidase domain CPQ91_07925 PF00989 PAS fold CPQ91_07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_07925 PF00512 His Kinase A (phospho-acceptor) domain CPQ91_07925 PF08447 PAS fold CPQ91_07930 PF00155 Aminotransferase class I and II CPQ91_07935 PF06271 RDD family CPQ91_07945 PF00072 Response regulator receiver domain CPQ91_07945 PF01584 CheW-like domain CPQ91_07950 PF14177 YkyB-like protein CPQ91_07955 PF07690 Major Facilitator Superfamily CPQ91_07960 PF01476 LysM domain CPQ91_07960 PF03734 L,D-transpeptidase catalytic domain CPQ91_07970 PF10518 TAT (twin-arginine translocation) pathway signal sequence CPQ91_07970 PF00149 Calcineurin-like phosphoesterase CPQ91_07980 PF10388 EAL-domain associated signalling protein domain CPQ91_07980 PF00563 EAL domain CPQ91_07990 PF08796 Protein of unknown function (DUF1797) CPQ91_08000 PF04308 Ribonuclease H-like CPQ91_08005 PF14156 Antirepressor AbbA CPQ91_08015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPQ91_08015 PF03466 LysR substrate binding domain CPQ91_08020 PF00258 Flavodoxin CPQ91_08030 PF00258 Flavodoxin CPQ91_08035 PF00132 Bacterial transferase hexapeptide (six repeats) CPQ91_08035 PF14602 Hexapeptide repeat of succinyl-transferase CPQ91_08035 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CPQ91_08040 PF01546 Peptidase family M20/M25/M40 CPQ91_08040 PF07687 Peptidase dimerisation domain CPQ91_08045 PF03698 Uncharacterised protein family (UPF0180) CPQ91_08050 PF10417 C-terminal domain of 1-Cys peroxiredoxin CPQ91_08050 PF00578 AhpC/TSA family CPQ91_08055 PF00578 AhpC/TSA family CPQ91_08070 PF12804 MobA-like NTP transferase domain CPQ91_08075 PF00899 ThiF family CPQ91_08080 PF03454 MoeA C-terminal region (domain IV) CPQ91_08080 PF00994 Probable molybdopterin binding domain CPQ91_08080 PF03453 MoeA N-terminal region (domain I and II) CPQ91_08085 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CPQ91_08090 PF02391 MoaE protein CPQ91_08095 PF02597 ThiS family CPQ91_08105 PF00005 ABC transporter CPQ91_08105 PF00664 ABC transporter transmembrane region CPQ91_08110 PF00005 ABC transporter CPQ91_08110 PF00664 ABC transporter transmembrane region CPQ91_08115 PF04893 Yip1 domain CPQ91_08120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CPQ91_08125 PF12704 MacB-like periplasmic core domain CPQ91_08125 PF02687 FtsX-like permease family CPQ91_08130 PF08220 DeoR-like helix-turn-helix domain CPQ91_08130 PF00455 DeoR C terminal sensor domain CPQ91_08135 PF00294 pfkB family carbohydrate kinase CPQ91_08140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPQ91_08140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPQ91_08145 PF10502 Signal peptidase, peptidase S26 CPQ91_08160 PF00005 ABC transporter CPQ91_08160 PF12848 ABC transporter CPQ91_08170 PF02073 Thermophilic metalloprotease (M29) CPQ91_08175 PF17447 Uncharacterized YkpC-like CPQ91_08185 PF18277 AbrB C-terminal domain CPQ91_08185 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CPQ91_08190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_08190 PF00512 His Kinase A (phospho-acceptor) domain CPQ91_08190 PF00989 PAS fold CPQ91_08195 PF02254 TrkA-N domain CPQ91_08195 PF02080 TrkA-C domain CPQ91_08200 PF01979 Amidohydrolase family CPQ91_08200 PF13382 Adenine deaminase C-terminal domain CPQ91_08205 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CPQ91_08205 PF17770 Ribonuclease J C-terminal domain CPQ91_08205 PF00753 Metallo-beta-lactamase superfamily CPQ91_08220 PF01327 Polypeptide deformylase CPQ91_08230 PF10368 Putative cell-wall binding lipoprotein CPQ91_08235 PF00676 Dehydrogenase E1 component CPQ91_08240 PF02780 Transketolase, C-terminal domain CPQ91_08240 PF02779 Transketolase, pyrimidine binding domain CPQ91_08245 PF00364 Biotin-requiring enzyme CPQ91_08245 PF02817 e3 binding domain CPQ91_08245 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CPQ91_08250 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPQ91_08250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPQ91_08260 PF13790 SR1 protein CPQ91_08265 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CPQ91_08265 PF01276 Orn/Lys/Arg decarboxylase, major domain CPQ91_08270 PF05256 Uncharacterised protein family (UPF0223) CPQ91_08275 PF06335 Protein of unknown function (DUF1054) CPQ91_08285 PF00459 Inositol monophosphatase family CPQ91_08290 PF00583 Acetyltransferase (GNAT) family CPQ91_08305 PF08281 Sigma-70, region 4 CPQ91_08305 PF04542 Sigma-70 region 2 CPQ91_08310 PF13490 Putative zinc-finger CPQ91_08325 PF14036 YlaH-like protein CPQ91_08330 PF01047 MarR family CPQ91_08335 PF01494 FAD binding domain CPQ91_08340 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) CPQ91_08345 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CPQ91_08350 PF13638 PIN domain CPQ91_08350 PF02562 PhoH-like protein CPQ91_08360 PF04960 Glutaminase CPQ91_08365 PF07408 Protein of unknown function (DUF1507) CPQ91_08370 PF01098 Cell cycle protein CPQ91_08375 PF00289 Biotin carboxylase, N-terminal domain CPQ91_08375 PF00364 Biotin-requiring enzyme CPQ91_08375 PF02785 Biotin carboxylase C-terminal domain CPQ91_08375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPQ91_08375 PF00682 HMGL-like CPQ91_08375 PF02436 Conserved carboxylase domain CPQ91_08380 PF02628 Cytochrome oxidase assembly protein CPQ91_08385 PF01040 UbiA prenyltransferase family CPQ91_08390 PF00034 Cytochrome c CPQ91_08390 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CPQ91_08390 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CPQ91_08395 PF00115 Cytochrome C and Quinol oxidase polypeptide I CPQ91_08400 PF00510 Cytochrome c oxidase subunit III CPQ91_08405 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CPQ91_08410 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CPQ91_08415 PF08868 YugN-like family CPQ91_08420 PF00571 CBS domain CPQ91_08425 PF00188 Cysteine-rich secretory protein family CPQ91_08425 PF14504 CAP-associated N-terminal CPQ91_08430 PF14071 Putative coat protein CPQ91_08435 PF14003 YlbE-like protein CPQ91_08440 PF06133 Control of competence regulator ComK, YlbF/YmcA CPQ91_08445 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CPQ91_08455 PF01467 Cytidylyltransferase-like CPQ91_08460 PF07670 Nucleoside recognition CPQ91_08465 PF13180 PDZ domain CPQ91_08465 PF05362 Lon protease (S16) C-terminal proteolytic domain CPQ91_08470 PF05636 HIGH Nucleotidyl Transferase CPQ91_08475 PF02620 Large ribosomal RNA subunit accumulation protein YceD CPQ91_08480 PF01783 Ribosomal L32p protein family CPQ91_08490 PF00583 Acetyltransferase (GNAT) family CPQ91_08495 PF08546 Ketopantoate reductase PanE/ApbA C terminal CPQ91_08495 PF02558 Ketopantoate reductase PanE/ApbA CPQ91_08500 PF10079 Bacillithiol biosynthesis BshC CPQ91_08505 PF02381 MraZ protein, putative antitoxin-like CPQ91_08510 PF01795 MraW methylase family CPQ91_08525 PF00905 Penicillin binding protein transpeptidase domain CPQ91_08525 PF03717 Penicillin-binding Protein dimerisation domain CPQ91_08525 PF03793 PASTA domain CPQ91_08530 PF01225 Mur ligase family, catalytic domain CPQ91_08530 PF08245 Mur ligase middle domain CPQ91_08530 PF02875 Mur ligase family, glutamate ligase domain CPQ91_08535 PF00953 Glycosyl transferase family 4 CPQ91_08535 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CPQ91_08540 PF08245 Mur ligase middle domain CPQ91_08540 PF02875 Mur ligase family, glutamate ligase domain CPQ91_08545 PF01098 Cell cycle protein CPQ91_08550 PF04101 Glycosyltransferase family 28 C-terminal domain CPQ91_08550 PF03033 Glycosyltransferase family 28 N-terminal domain CPQ91_08555 PF01565 FAD binding domain CPQ91_08555 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CPQ91_08560 PF08478 POTRA domain, FtsQ-type CPQ91_08565 PF05949 Bacterial protein of unknown function (DUF881) CPQ91_08570 PF05949 Bacterial protein of unknown function (DUF881) CPQ91_08575 PF06947 Protein of unknown function (DUF1290) CPQ91_08580 PF02491 SHS2 domain inserted in FTSA CPQ91_08585 PF12327 FtsZ family, C-terminal domain CPQ91_08585 PF00091 Tubulin/FtsZ family, GTPase domain CPQ91_08590 PF00082 Subtilase family CPQ91_08590 PF05922 Peptidase inhibitor I9 CPQ91_08595 PF00082 Subtilase family CPQ91_08595 PF05922 Peptidase inhibitor I9 CPQ91_08600 PF03419 Sporulation factor SpoIIGA CPQ91_08605 PF04542 Sigma-70 region 2 CPQ91_08605 PF04545 Sigma-70, region 4 CPQ91_08610 PF04542 Sigma-70 region 2 CPQ91_08610 PF04539 Sigma-70 region 3 CPQ91_08610 PF04545 Sigma-70, region 4 CPQ91_08615 PF00005 ABC transporter CPQ91_08620 PF08241 Methyltransferase domain CPQ91_08625 PF05239 PRC-barrel domain CPQ91_08635 PF01168 Alanine racemase, N-terminal domain CPQ91_08640 PF04472 Cell division protein SepF CPQ91_08645 PF02325 YGGT family CPQ91_08650 PF01479 S4 domain CPQ91_08650 PF17774 Putative RNA-binding domain in YlmH CPQ91_08655 PF05103 DivIVA protein CPQ91_08660 PF08264 Anticodon-binding domain of tRNA CPQ91_08660 PF00133 tRNA synthetases class I (I, L, M and V) CPQ91_08660 PF06827 Zinc finger found in FPG and IleRS CPQ91_08665 PF01258 Prokaryotic dksA/traR C4-type zinc finger CPQ91_08670 PF01252 Signal peptidase (SPase) II CPQ91_08675 PF00849 RNA pseudouridylate synthase CPQ91_08675 PF01479 S4 domain CPQ91_08680 PF00156 Phosphoribosyl transferase domain CPQ91_08685 PF00860 Permease family CPQ91_08690 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPQ91_08690 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPQ91_08695 PF01979 Amidohydrolase family CPQ91_08700 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CPQ91_08700 PF00117 Glutamine amidotransferase class-I CPQ91_08705 PF02142 MGS-like domain CPQ91_08705 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPQ91_08705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPQ91_08710 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CPQ91_08710 PF00175 Oxidoreductase NAD-binding domain CPQ91_08715 PF01180 Dihydroorotate dehydrogenase CPQ91_08720 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CPQ91_08725 PF00156 Phosphoribosyl transferase domain CPQ91_08735 PF01507 Phosphoadenosine phosphosulfate reductase family CPQ91_08740 PF01384 Phosphate transporter family CPQ91_08745 PF14306 PUA-like domain CPQ91_08745 PF01747 ATP-sulfurylase CPQ91_08755 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPQ91_08760 PF01903 CbiX CPQ91_08775 PF00690 Cation transporter/ATPase, N-terminus CPQ91_08775 PF00689 Cation transporting ATPase, C-terminus CPQ91_08780 PF08340 Domain of unknown function (DUF1732) CPQ91_08780 PF03755 YicC-like family, N-terminal region CPQ91_08785 PF04025 Domain of unknown function (DUF370) CPQ91_08790 PF00625 Guanylate kinase CPQ91_08795 PF01192 RNA polymerase Rpb6 CPQ91_08800 PF02441 Flavoprotein CPQ91_08800 PF04127 DNA / pantothenate metabolism flavoprotein CPQ91_08805 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CPQ91_08805 PF04851 Type III restriction enzyme, res subunit CPQ91_08805 PF18074 Primosomal protein N C-terminal domain CPQ91_08805 PF00271 Helicase conserved C-terminal domain CPQ91_08805 PF17764 3′ DNA-binding domain (3′BD) CPQ91_08810 PF01327 Polypeptide deformylase CPQ91_08815 PF02911 Formyl transferase, C-terminal domain CPQ91_08815 PF00551 Formyl transferase CPQ91_08820 PF01029 NusB family CPQ91_08820 PF01189 16S rRNA methyltransferase RsmB/F CPQ91_08825 PF04055 Radical SAM superfamily CPQ91_08835 PF00069 Protein kinase domain CPQ91_08835 PF03793 PASTA domain CPQ91_08840 PF16745 RsgA N-terminal domain CPQ91_08840 PF03193 RsgA GTPase CPQ91_08845 PF00834 Ribulose-phosphate 3 epimerase family CPQ91_08850 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CPQ91_08850 PF04263 Thiamin pyrophosphokinase, catalytic domain CPQ91_08855 PF08183 Stage V sporulation protein family CPQ91_08860 PF00830 Ribosomal L28 family CPQ91_08865 PF03780 Asp23 family, cell envelope-related function CPQ91_08870 PF13684 Dihydroxyacetone kinase family CPQ91_08870 PF02734 DAK2 domain CPQ91_08875 PF03315 Serine dehydratase beta chain CPQ91_08875 PF01842 ACT domain CPQ91_08880 PF03313 Serine dehydratase alpha chain CPQ91_08885 PF00271 Helicase conserved C-terminal domain CPQ91_08885 PF00270 DEAD/DEAH box helicase CPQ91_08885 PF17191 RecG wedge domain CPQ91_08890 PF03061 Thioesterase superfamily CPQ91_08890 PF08279 HTH domain CPQ91_08895 PF02504 Fatty acid synthesis protein CPQ91_08900 PF00698 Acyl transferase domain CPQ91_08910 PF00550 Phosphopantetheine attachment site CPQ91_08915 PF14622 Ribonuclease-III-like CPQ91_08915 PF00035 Double-stranded RNA binding motif CPQ91_08920 PF06470 SMC proteins Flexible Hinge Domain CPQ91_08920 PF02463 RecF/RecN/SMC N terminal domain CPQ91_08925 PF00448 SRP54-type protein, GTPase domain CPQ91_08925 PF02881 SRP54-type protein, helical bundle domain CPQ91_08930 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CPQ91_08935 PF00448 SRP54-type protein, GTPase domain CPQ91_08935 PF02978 Signal peptide binding domain CPQ91_08935 PF02881 SRP54-type protein, helical bundle domain CPQ91_08940 PF00886 Ribosomal protein S16 CPQ91_08950 PF11068 YlqD protein CPQ91_08955 PF05239 PRC-barrel domain CPQ91_08955 PF01782 RimM N-terminal domain CPQ91_08960 PF01746 tRNA (Guanine-1)-methyltransferase CPQ91_08965 PF01245 Ribosomal protein L19 CPQ91_08970 PF01926 50S ribosome-binding GTPase CPQ91_08975 PF01351 Ribonuclease HII CPQ91_08985 PF01312 FlhB HrpN YscU SpaS Family CPQ91_08990 PF00549 CoA-ligase CPQ91_08990 PF08442 ATP-grasp domain CPQ91_08995 PF02629 CoA binding domain CPQ91_08995 PF00549 CoA-ligase CPQ91_09000 PF02481 DNA recombination-mediator protein A CPQ91_09005 PF01751 Toprim domain CPQ91_09005 PF01131 DNA topoisomerase CPQ91_09005 PF01396 Topoisomerase DNA binding C4 zinc finger CPQ91_09010 PF01134 Glucose inhibited division protein A CPQ91_09015 PF00589 Phage integrase family CPQ91_09015 PF02899 Phage integrase, N-terminal SAM-like domain CPQ91_09020 PF00227 Proteasome subunit CPQ91_09025 PF07724 AAA domain (Cdc48 subfamily) CPQ91_09025 PF10431 C-terminal, D2-small domain, of ClpB protein CPQ91_09025 PF00004 ATPase family associated with various cellular activities (AAA) CPQ91_09030 PF06018 CodY GAF-like domain CPQ91_09030 PF08222 CodY helix-turn-helix domain CPQ91_09035 PF00460 Flagella basal body rod protein CPQ91_09040 PF00460 Flagella basal body rod protein CPQ91_09040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPQ91_09045 PF02049 Flagellar hook-basal body complex protein FliE CPQ91_09050 PF08345 Flagellar M-ring protein C-terminal CPQ91_09050 PF01514 Secretory protein of YscJ/FliF family CPQ91_09055 PF01706 FliG C-terminal domain CPQ91_09055 PF14842 FliG N-terminal domain CPQ91_09055 PF14841 FliG middle domain CPQ91_09060 PF02108 Flagellar assembly protein FliH CPQ91_09065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPQ91_09065 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPQ91_09065 PF18269 T3SS EscN ATPase C-terminal domain CPQ91_09070 PF02050 Flagellar FliJ protein CPQ91_09080 PF02120 Flagellar hook-length control protein FliK CPQ91_09085 PF03963 Flagellar hook capping protein - N-terminal region CPQ91_09090 PF00460 Flagella basal body rod protein CPQ91_09090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPQ91_09095 PF06289 Flagellar and Swarming motility proteins CPQ91_09100 PF03748 Flagellar basal body-associated protein FliL CPQ91_09105 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CPQ91_09105 PF02154 Flagellar motor switch protein FliM CPQ91_09110 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CPQ91_09110 PF04509 CheC-like family CPQ91_09115 PF00072 Response regulator receiver domain CPQ91_09120 PF04347 Flagellar biosynthesis protein, FliO CPQ91_09125 PF00813 FliP family CPQ91_09130 PF01313 Bacterial export proteins, family 3 CPQ91_09135 PF01311 Bacterial export proteins, family 1 CPQ91_09140 PF01312 FlhB HrpN YscU SpaS Family CPQ91_09145 PF00771 FHIPEP family CPQ91_09150 PF00448 SRP54-type protein, GTPase domain CPQ91_09155 PF10609 NUBPL iron-transfer P-loop NTPase CPQ91_09160 PF00072 Response regulator receiver domain CPQ91_09160 PF01339 CheB methylesterase CPQ91_09165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_09165 PF02895 Signal transducing histidine kinase, homodimeric domain CPQ91_09165 PF01584 CheW-like domain CPQ91_09165 PF07194 P2 response regulator binding domain CPQ91_09165 PF01627 Hpt domain CPQ91_09170 PF01584 CheW-like domain CPQ91_09175 PF04509 CheC-like family CPQ91_09180 PF03975 CheD chemotactic sensory transduction CPQ91_09195 PF00318 Ribosomal protein S2 CPQ91_09200 PF00889 Elongation factor TS CPQ91_09205 PF00696 Amino acid kinase family CPQ91_09210 PF01765 Ribosome recycling factor CPQ91_09215 PF01255 Putative undecaprenyl diphosphate synthase CPQ91_09225 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CPQ91_09225 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CPQ91_09225 PF13288 DXP reductoisomerase C-terminal domain CPQ91_09230 PF17820 PDZ domain CPQ91_09230 PF02163 Peptidase family M50 CPQ91_09235 PF04073 Aminoacyl-tRNA editing domain CPQ91_09235 PF03129 Anticodon binding domain CPQ91_09235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPQ91_09240 PF02811 PHP domain CPQ91_09240 PF00929 Exonuclease CPQ91_09240 PF14579 Helix-hairpin-helix motif CPQ91_09240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPQ91_09240 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPQ91_09240 PF14480 DNA polymerase III polC-type N-terminus I CPQ91_09240 PF11490 DNA polymerase III polC-type N-terminus II CPQ91_09250 PF00759 Glycosyl hydrolase family 9 CPQ91_09250 PF00942 Cellulose binding domain CPQ91_09255 PF00942 Cellulose binding domain CPQ91_09255 PF00759 Glycosyl hydrolase family 9 CPQ91_09255 PF02011 Glycosyl hydrolase family 48 CPQ91_09260 PF18448 Carbohydrate binding domain CPQ91_09260 PF00150 Cellulase (glycosyl hydrolase family 5) CPQ91_09260 PF03442 Carbohydrate binding domain X2 CPQ91_09270 PF17384 RimP C-terminal SH3 domain CPQ91_09270 PF02576 RimP N-terminal domain CPQ91_09275 PF00575 S1 RNA binding domain CPQ91_09275 PF08529 NusA N-terminal domain CPQ91_09275 PF13184 NusA-like KH domain CPQ91_09280 PF04296 Protein of unknown function (DUF448) CPQ91_09285 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CPQ91_09290 PF11987 Translation-initiation factor 2 CPQ91_09290 PF04760 Translation initiation factor IF-2, N-terminal region CPQ91_09290 PF00009 Elongation factor Tu GTP binding domain CPQ91_09295 PF04456 Protein of unknown function (DUF503) CPQ91_09300 PF02033 Ribosome-binding factor A CPQ91_09305 PF01509 TruB family pseudouridylate synthase (N terminal domain) CPQ91_09305 PF16198 tRNA pseudouridylate synthase B C-terminal domain CPQ91_09310 PF06574 FAD synthetase CPQ91_09310 PF01687 Riboflavin kinase CPQ91_09315 PF00312 Ribosomal protein S15 CPQ91_09320 PF03725 3' exoribonuclease family, domain 2 CPQ91_09320 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CPQ91_09320 PF00575 S1 RNA binding domain CPQ91_09320 PF01138 3' exoribonuclease family, domain 1 CPQ91_09320 PF00013 KH domain CPQ91_09325 PF01522 Polysaccharide deacetylase CPQ91_09330 PF05193 Peptidase M16 inactive domain CPQ91_09330 PF00675 Insulinase (Peptidase family M16) CPQ91_09335 PF05239 PRC-barrel domain CPQ91_09340 PF16924 Dipicolinate synthase subunit A N-terminal domain CPQ91_09340 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CPQ91_09345 PF02441 Flavoprotein CPQ91_09350 PF01118 Semialdehyde dehydrogenase, NAD binding domain CPQ91_09350 PF02774 Semialdehyde dehydrogenase, dimerisation domain CPQ91_09355 PF13840 ACT domain CPQ91_09355 PF00696 Amino acid kinase family CPQ91_09360 PF00701 Dihydrodipicolinate synthetase family CPQ91_09365 PF17770 Ribonuclease J C-terminal domain CPQ91_09365 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CPQ91_09365 PF00753 Metallo-beta-lactamase superfamily CPQ91_09370 PF00574 Clp protease CPQ91_09375 PF14035 YlzJ-like protein CPQ91_09380 PF01580 FtsK/SpoIIIE family CPQ91_09380 PF09397 Ftsk gamma domain CPQ91_09380 PF17854 FtsK alpha domain CPQ91_09385 PF00392 Bacterial regulatory proteins, gntR family CPQ91_09385 PF07702 UTRA domain CPQ91_09390 PF07690 Major Facilitator Superfamily CPQ91_09395 PF05193 Peptidase M16 inactive domain CPQ91_09400 PF00675 Insulinase (Peptidase family M16) CPQ91_09400 PF05193 Peptidase M16 inactive domain CPQ91_09410 PF11588 Protein of unknown function (DUF3243) CPQ91_09415 PF11868 Protein of unknown function (DUF3388) CPQ91_09420 PF13464 Domain of unknown function (DUF4115) CPQ91_09425 PF01066 CDP-alcohol phosphatidyltransferase CPQ91_09430 PF00994 Probable molybdopterin binding domain CPQ91_09430 PF02464 Competence-damaged protein CPQ91_09430 PF18146 Damage-inducible protein CinA KH domain CPQ91_09435 PF00154 recA bacterial DNA recombination protein CPQ91_09440 PF12072 Domain of unknown function (DUF3552) CPQ91_09440 PF00013 KH domain CPQ91_09440 PF01966 HD domain CPQ91_09445 PF13277 YmdB-like protein CPQ91_09450 PF04232 Stage V sporulation protein S (SpoVS) CPQ91_09455 PF01244 Membrane dipeptidase (Peptidase family M19) CPQ91_09460 PF00107 Zinc-binding dehydrogenase CPQ91_09460 PF08240 Alcohol dehydrogenase GroES-like domain CPQ91_09465 PF00155 Aminotransferase class I and II CPQ91_09470 PF00919 Uncharacterized protein family UPF0004 CPQ91_09470 PF01938 TRAM domain CPQ91_09470 PF04055 Radical SAM superfamily CPQ91_09475 PF06133 Control of competence regulator ComK, YlbF/YmcA CPQ91_09480 PF10628 Outer spore coat protein E (CotE) CPQ91_09485 PF05190 MutS family domain IV CPQ91_09485 PF05188 MutS domain II CPQ91_09485 PF01624 MutS domain I CPQ91_09485 PF05192 MutS domain III CPQ91_09485 PF00488 MutS domain V CPQ91_09490 PF08676 MutL C terminal dimerisation domain CPQ91_09490 PF01119 DNA mismatch repair protein, C-terminal domain CPQ91_09495 PF03992 Antibiotic biosynthesis monooxygenase CPQ91_09500 PF14449 Pre-toxin TG CPQ91_09500 PF04740 LXG domain of WXG superfamily CPQ91_09520 PF07683 Cobalamin synthesis protein cobW C-terminal domain CPQ91_09520 PF02492 CobW/HypB/UreG, nucleotide-binding domain CPQ91_09530 PF00583 Acetyltransferase (GNAT) family CPQ91_09545 PF01593 Flavin containing amine oxidoreductase CPQ91_09550 PF06912 Protein of unknown function (DUF1275) CPQ91_09555 PF00999 Sodium/hydrogen exchanger family CPQ91_09555 PF03471 Transporter associated domain CPQ91_09555 PF02080 TrkA-C domain CPQ91_09565 PF00561 alpha/beta hydrolase fold CPQ91_09570 PF00561 alpha/beta hydrolase fold CPQ91_09575 PF01906 Putative heavy-metal-binding CPQ91_09580 PF09335 SNARE associated Golgi protein CPQ91_09585 PF00144 Beta-lactamase CPQ91_09585 PF11954 Domain of unknown function (DUF3471) CPQ91_09590 PF04101 Glycosyltransferase family 28 C-terminal domain CPQ91_09595 PF13520 Amino acid permease CPQ91_09600 PF07875 Coat F domain CPQ91_09610 PF01476 LysM domain CPQ91_09610 PF00704 Glycosyl hydrolases family 18 CPQ91_09615 PF00440 Bacterial regulatory proteins, tetR family CPQ91_09620 PF12680 SnoaL-like domain CPQ91_09625 PF01370 NAD dependent epimerase/dehydratase family CPQ91_09635 PF02566 OsmC-like protein CPQ91_09640 PF00893 Small Multidrug Resistance protein CPQ91_09645 PF00893 Small Multidrug Resistance protein CPQ91_09655 PF12788 YmaF family CPQ91_09665 PF17209 Hfq protein CPQ91_09680 PF07972 NrdI Flavodoxin like CPQ91_09685 PF08343 Ribonucleotide reductase N-terminal CPQ91_09685 PF00317 Ribonucleotide reductase, all-alpha domain CPQ91_09685 PF02867 Ribonucleotide reductase, barrel domain CPQ91_09690 PF00268 Ribonucleotide reductase, small chain CPQ91_09700 PF00753 Metallo-beta-lactamase superfamily CPQ91_09705 PF01592 NifU-like N terminal domain CPQ91_09710 PF01475 Ferric uptake regulator family CPQ91_09715 PF07729 FCD domain CPQ91_09715 PF00392 Bacterial regulatory proteins, gntR family CPQ91_09720 PF13536 Putative multidrug resistance efflux transporter CPQ91_09725 PF01520 N-acetylmuramoyl-L-alanine amidase CPQ91_09725 PF05036 Sporulation related domain CPQ91_09755 PF00440 Bacterial regulatory proteins, tetR family CPQ91_09770 PF01968 Hydantoinase/oxoprolinase CPQ91_09770 PF05378 Hydantoinase/oxoprolinase N-terminal region CPQ91_09780 PF02538 Hydantoinase B/oxoprolinase CPQ91_09805 PF00004 ATPase family associated with various cellular activities (AAA) CPQ91_09805 PF17866 AAA lid domain CPQ91_09810 PF13167 GTP-binding GTPase N-terminal CPQ91_09810 PF01926 50S ribosome-binding GTPase CPQ91_09810 PF16360 GTP-binding GTPase Middle Region CPQ91_09815 PF06838 Methionine gamma-lyase CPQ91_09820 PF13411 MerR HTH family regulatory protein CPQ91_09825 PF03951 Glutamine synthetase, beta-Grasp domain CPQ91_09825 PF00120 Glutamine synthetase, catalytic domain CPQ91_09855 PF01230 HIT domain CPQ91_09890 PF16302 Domain of unknown function (DUF4944) CPQ91_09910 PF17934 Tetracyclin repressor-like, C-terminal domain CPQ91_09910 PF00440 Bacterial regulatory proteins, tetR family CPQ91_09915 PF00893 Small Multidrug Resistance protein CPQ91_09920 PF00893 Small Multidrug Resistance protein CPQ91_09925 PF13302 Acetyltransferase (GNAT) domain CPQ91_09940 PF08534 Redoxin CPQ91_09945 PF05067 Manganese containing catalase CPQ91_09965 PF08360 QacR-like protein, C-terminal region CPQ91_09965 PF00440 Bacterial regulatory proteins, tetR family CPQ91_09970 PF01047 MarR family CPQ91_09975 PF00881 Nitroreductase family CPQ91_09980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPQ91_09985 PF01613 Flavin reductase like domain CPQ91_09990 PF03358 NADPH-dependent FMN reductase CPQ91_10005 PF00303 Thymidylate synthase CPQ91_10010 PF14040 Deoxyribonuclease NucA/NucB CPQ91_10015 PF01726 LexA DNA binding domain CPQ91_10015 PF00717 Peptidase S24-like CPQ91_10020 PF01476 LysM domain CPQ91_10025 PF00239 Resolvase, N terminal domain CPQ91_10030 PF05979 Bacterial protein of unknown function (DUF896) CPQ91_10035 PF02780 Transketolase, C-terminal domain CPQ91_10035 PF00456 Transketolase, thiamine diphosphate binding domain CPQ91_10035 PF02779 Transketolase, pyrimidine binding domain CPQ91_10040 PF10747 Sporulation inhibitor of replication protein SirA CPQ91_10045 PF03672 Uncharacterised protein family (UPF0154) CPQ91_10050 PF09388 Spo0E like sporulation regulatory protein CPQ91_10055 PF02683 Cytochrome C biogenesis protein transmembrane region CPQ91_10060 PF00072 Response regulator receiver domain CPQ91_10065 PF07301 Protein of unknown function (DUF1453) CPQ91_10070 PF11084 Protein of unknown function (DUF2621) CPQ91_10080 PF08179 Small acid-soluble spore protein P family CPQ91_10090 PF00694 Aconitase C-terminal domain CPQ91_10090 PF00330 Aconitase family (aconitate hydratase) CPQ91_10095 PF00578 AhpC/TSA family CPQ91_10100 PF13040 Fur-regulated basic protein B CPQ91_10105 PF08177 Small acid-soluble spore protein N family CPQ91_10115 PF03061 Thioesterase superfamily CPQ91_10140 PF01521 Iron-sulphur cluster biosynthesis CPQ91_10145 PF02660 Glycerol-3-phosphate acyltransferase CPQ91_10150 PF13380 CoA binding domain CPQ91_10155 PF00986 DNA gyrase B subunit, carboxyl terminus CPQ91_10155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_10155 PF01751 Toprim domain CPQ91_10155 PF00204 DNA gyrase B CPQ91_10160 PF00521 DNA gyrase/topoisomerase IV, subunit A CPQ91_10160 PF03989 DNA gyrase C-terminal domain, beta-propeller CPQ91_10165 PF00392 Bacterial regulatory proteins, gntR family CPQ91_10175 PF00596 Class II Aldolase and Adducin N-terminal domain CPQ91_10180 PF11762 L-arabinose isomerase C-terminal domain CPQ91_10180 PF02610 L-arabinose isomerase CPQ91_10185 PF00083 Sugar (and other) transporter CPQ91_10190 PF00106 short chain dehydrogenase CPQ91_10200 PF01235 Sodium:alanine symporter family CPQ91_10210 PF02665 Nitrate reductase gamma subunit CPQ91_10215 PF02613 Nitrate reductase delta subunit CPQ91_10220 PF13247 4Fe-4S dicluster domain CPQ91_10220 PF14711 Respiratory nitrate reductase beta C-terminal CPQ91_10225 PF00384 Molybdopterin oxidoreductase CPQ91_10225 PF01568 Molydopterin dinucleotide binding domain CPQ91_10225 PF14710 Respiratory nitrate reductase alpha N-terminal CPQ91_10240 PF06463 Molybdenum Cofactor Synthesis C CPQ91_10240 PF04055 Radical SAM superfamily CPQ91_10250 PF14256 YwiC-like protein CPQ91_10255 PF00027 Cyclic nucleotide-binding domain CPQ91_10255 PF00325 Bacterial regulatory proteins, crp family CPQ91_10260 PF07690 Major Facilitator Superfamily CPQ91_10270 PF00027 Cyclic nucleotide-binding domain CPQ91_10270 PF13545 Crp-like helix-turn-helix domain CPQ91_10275 PF00115 Cytochrome C and Quinol oxidase polypeptide I CPQ91_10280 PF04405 Domain of Unknown function (DUF542) CPQ91_10280 PF01814 Hemerythrin HHE cation binding domain CPQ91_10285 PF07098 Protein of unknown function (DUF1360) CPQ91_10290 PF00150 Cellulase (glycosyl hydrolase family 5) CPQ91_10290 PF00942 Cellulose binding domain CPQ91_10295 PF17452 Uncharacterized YnfE-like CPQ91_10300 PF13302 Acetyltransferase (GNAT) domain CPQ91_10310 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPQ91_10325 PF13229 Right handed beta helix region CPQ91_10330 PF05525 Branched-chain amino acid transport protein CPQ91_10340 PF13411 MerR HTH family regulatory protein CPQ91_10350 PF12706 Beta-lactamase superfamily domain CPQ91_10365 PF00378 Enoyl-CoA hydratase/isomerase CPQ91_10370 PF00171 Aldehyde dehydrogenase family CPQ91_10375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CPQ91_10375 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CPQ91_10380 PF02770 Acyl-CoA dehydrogenase, middle domain CPQ91_10380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CPQ91_10380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPQ91_10385 PF01238 Phosphomannose isomerase type I CPQ91_10390 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPQ91_10390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPQ91_10390 PF02378 Phosphotransferase system, EIIC CPQ91_10410 PF08279 HTH domain CPQ91_10410 PF00874 PRD domain CPQ91_10410 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPQ91_10410 PF05043 Mga helix-turn-helix domain CPQ91_10420 PF00005 ABC transporter CPQ91_10425 PF00392 Bacterial regulatory proteins, gntR family CPQ91_10430 PF00106 short chain dehydrogenase CPQ91_10435 PF03786 D-mannonate dehydratase (UxuA) CPQ91_10440 PF13802 Galactose mutarotase-like CPQ91_10440 PF17137 Domain of unknown function (DUF5110) CPQ91_10440 PF01055 Glycosyl hydrolases family 31 CPQ91_10440 PF16338 Domain of unknown function (DUF4968) CPQ91_10445 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CPQ91_10450 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CPQ91_10455 PF03480 Bacterial extracellular solute-binding protein, family 7 CPQ91_10460 PF00356 Bacterial regulatory proteins, lacI family CPQ91_10465 PF01451 Low molecular weight phosphotyrosine protein phosphatase CPQ91_10470 PF02040 Arsenical pump membrane protein CPQ91_10475 PF01022 Bacterial regulatory protein, arsR family CPQ91_10485 PF08818 Domain of unknown function (DU1801) CPQ91_10495 PF06800 Sugar transport protein CPQ91_10500 PF02638 Glycosyl hydrolase-like 10 CPQ91_10510 PF04055 Radical SAM superfamily CPQ91_10515 PF02901 Pyruvate formate lyase-like CPQ91_10515 PF01228 Glycine radical CPQ91_10520 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CPQ91_10525 PF04239 Protein of unknown function (DUF421) CPQ91_10530 PF13396 Phospholipase_D-nuclease N-terminal CPQ91_10530 PF13091 PLD-like domain CPQ91_10540 PF04239 Protein of unknown function (DUF421) CPQ91_10550 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CPQ91_10555 PF07451 Stage V sporulation protein AD (SpoVAD) CPQ91_10560 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CPQ91_10580 PF05067 Manganese containing catalase CPQ91_10595 PF03323 Bacillus/Clostridium GerA spore germination protein CPQ91_10600 PF01520 N-acetylmuramoyl-L-alanine amidase CPQ91_10600 PF05036 Sporulation related domain CPQ91_10620 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPQ91_10625 PF07849 Protein of unknown function (DUF1641) CPQ91_10635 PF12728 Helix-turn-helix domain CPQ91_10645 PF00501 AMP-binding enzyme CPQ91_10645 PF13193 AMP-binding enzyme C-terminal domain CPQ91_10645 PF16177 Acetyl-coenzyme A synthetase N-terminus CPQ91_10650 PF01039 Carboxyl transferase domain CPQ91_10655 PF00378 Enoyl-CoA hydratase/isomerase CPQ91_10660 PF00682 HMGL-like CPQ91_10665 PF00364 Biotin-requiring enzyme CPQ91_10670 PF02785 Biotin carboxylase C-terminal domain CPQ91_10670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPQ91_10670 PF00289 Biotin carboxylase, N-terminal domain CPQ91_10675 PF00501 AMP-binding enzyme CPQ91_10675 PF13193 AMP-binding enzyme C-terminal domain CPQ91_10680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPQ91_10680 PF02770 Acyl-CoA dehydrogenase, middle domain CPQ91_10680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CPQ91_10685 PF02525 Flavodoxin-like fold CPQ91_10690 PF01638 HxlR-like helix-turn-helix CPQ91_10695 PF00171 Aldehyde dehydrogenase family CPQ91_10700 PF00696 Amino acid kinase family CPQ91_10700 PF01472 PUA domain CPQ91_10705 PF14748 Pyrroline-5-carboxylate reductase dimerisation CPQ91_10705 PF03807 NADP oxidoreductase coenzyme F420-dependent CPQ91_10710 PF04239 Protein of unknown function (DUF421) CPQ91_10715 PF01384 Phosphate transporter family CPQ91_10720 PF01507 Phosphoadenosine phosphosulfate reductase family CPQ91_10725 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) CPQ91_10730 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CPQ91_10740 PF07690 Major Facilitator Superfamily CPQ91_10745 PF00535 Glycosyl transferase family 2 CPQ91_10760 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CPQ91_10760 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPQ91_10765 PF00310 Glutamine amidotransferases class-II CPQ91_10765 PF04898 Glutamate synthase central domain CPQ91_10765 PF01493 GXGXG motif CPQ91_10765 PF01645 Conserved region in glutamate synthase CPQ91_10770 PF03466 LysR substrate binding domain CPQ91_10770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPQ91_10790 PF01047 MarR family CPQ91_10795 PF00664 ABC transporter transmembrane region CPQ91_10795 PF00005 ABC transporter CPQ91_10800 PF00005 ABC transporter CPQ91_10800 PF00664 ABC transporter transmembrane region CPQ91_10805 PF00067 Cytochrome P450 CPQ91_10810 PF00106 short chain dehydrogenase CPQ91_10825 PF07690 Major Facilitator Superfamily CPQ91_10830 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPQ91_10830 PF00384 Molybdopterin oxidoreductase CPQ91_10830 PF01568 Molydopterin dinucleotide binding domain CPQ91_10835 PF01047 MarR family CPQ91_10840 PF07690 Major Facilitator Superfamily CPQ91_10845 PF03845 Spore germination protein CPQ91_10850 PF05504 Spore germination B3/ GerAC like, C-terminal CPQ91_10855 PF03845 Spore germination protein CPQ91_10860 PF03845 Spore germination protein CPQ91_10865 PF03323 Bacillus/Clostridium GerA spore germination protein CPQ91_10880 PF02743 Cache domain CPQ91_10880 PF00672 HAMP domain CPQ91_10880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPQ91_10885 PF01588 Putative tRNA binding domain CPQ91_10890 PF00082 Subtilase family CPQ91_10900 PF17932 Tetracyclin repressor-like, C-terminal domain CPQ91_10900 PF00440 Bacterial regulatory proteins, tetR family CPQ91_10905 PF01047 MarR family CPQ91_10910 PF01966 HD domain CPQ91_10920 PF14158 YndJ-like protein CPQ91_10925 PF13761 Domain of unknown function (DUF4166) CPQ91_10935 PF13305 Tetracyclin repressor-like, C-terminal domain CPQ91_10935 PF00440 Bacterial regulatory proteins, tetR family CPQ91_10940 PF00753 Metallo-beta-lactamase superfamily CPQ91_10945 PF06445 GyrI-like small molecule binding domain CPQ91_10955 PF08279 HTH domain CPQ91_10955 PF13280 WYL domain CPQ91_10965 PF01022 Bacterial regulatory protein, arsR family CPQ91_10980 PF00324 Amino acid permease CPQ91_10990 PF02719 Polysaccharide biosynthesis protein CPQ91_11005 PF00534 Glycosyl transferases group 1 CPQ91_11010 PF04238 Protein of unknown function (DUF420) CPQ91_11025 PF00474 Sodium:solute symporter family CPQ91_11030 PF06725 3D domain CPQ91_11030 PF01476 LysM domain CPQ91_11035 PF00270 DEAD/DEAH box helicase CPQ91_11035 PF00271 Helicase conserved C-terminal domain CPQ91_11035 PF09382 RQC domain CPQ91_11035 PF16124 RecQ zinc-binding CPQ91_11035 PF00570 HRDC domain CPQ91_11055 PF04237 YjbR CPQ91_11075 PF07849 Protein of unknown function (DUF1641) CPQ91_11080 PF00384 Molybdopterin oxidoreductase CPQ91_11080 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CPQ91_11080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPQ91_11080 PF12838 4Fe-4S dicluster domain CPQ91_11080 PF01568 Molydopterin dinucleotide binding domain CPQ91_11105 PF07238 PilZ domain CPQ91_11105 PF12945 Flagellar protein YcgR CPQ91_11130 PF13217 Protein of unknown function (DUF4025) CPQ91_11135 PF05504 Spore germination B3/ GerAC like, C-terminal CPQ91_11150 PF01979 Amidohydrolase family CPQ91_11155 PF11122 Inner spore coat protein D CPQ91_11165 PF08386 TAP-like protein CPQ91_11165 PF00561 alpha/beta hydrolase fold CPQ91_11175 PF11122 Inner spore coat protein D CPQ91_11180 PF01810 LysE type translocator CPQ91_11185 PF00253 Ribosomal protein S14p/S29e CPQ91_11190 PF00293 NUDIX domain CPQ91_11190 PF13344 Haloacid dehalogenase-like hydrolase CPQ91_11195 PF00391 PEP-utilising enzyme, mobile domain CPQ91_11195 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CPQ91_11200 PF00440 Bacterial regulatory proteins, tetR family CPQ91_11210 PF10710 Protein of unknown function (DUF2512) CPQ91_11215 PF05163 DinB family CPQ91_11220 PF02525 Flavodoxin-like fold CPQ91_11225 PF01258 Prokaryotic dksA/traR C4-type zinc finger CPQ91_11230 PF08000 Bacterial PH domain CPQ91_11240 PF00171 Aldehyde dehydrogenase family CPQ91_11245 PF07690 Major Facilitator Superfamily CPQ91_11250 PF01636 Phosphotransferase enzyme family CPQ91_11260 PF13249 Squalene-hopene cyclase N-terminal domain CPQ91_11260 PF13243 Squalene-hopene cyclase C-terminal domain CPQ91_11265 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CPQ91_11265 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CPQ91_11275 PF00209 Sodium:neurotransmitter symporter family CPQ91_11280 PF01758 Sodium Bile acid symporter family CPQ91_11285 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CPQ91_11285 PF02817 e3 binding domain CPQ91_11285 PF00364 Biotin-requiring enzyme CPQ91_11290 PF00676 Dehydrogenase E1 component CPQ91_11290 PF16870 2-oxoglutarate dehydrogenase C-terminal CPQ91_11290 PF02779 Transketolase, pyrimidine binding domain CPQ91_11295 PF00092 von Willebrand factor type A domain CPQ91_11300 PF07728 AAA domain (dynein-related subfamily) CPQ91_11305 PF00080 Copper/zinc superoxide dismutase (SODC) CPQ91_11305 PF13627 Prokaryotic lipoprotein-attachment site CPQ91_11310 PF00877 NlpC/P60 family CPQ91_11310 PF01476 LysM domain CPQ91_11320 PF01554 MatE CPQ91_11325 PF02585 GlcNAc-PI de-N-acetylase CPQ91_11330 PF08830 Protein of unknown function (DUF1806) CPQ91_11340 PF00892 EamA-like transporter family CPQ91_11350 PF03330 Lytic transglycolase CPQ91_11365 PF01638 HxlR-like helix-turn-helix CPQ91_11370 PF00881 Nitroreductase family CPQ91_11375 PF01738 Dienelactone hydrolase family CPQ91_11380 PF11755 Protein of unknown function (DUF3311) CPQ91_11385 PF00474 Sodium:solute symporter family CPQ91_11390 PF01471 Putative peptidoglycan binding domain CPQ91_11390 PF03572 Peptidase family S41 CPQ91_11390 PF17820 PDZ domain CPQ91_11395 PF08241 Methyltransferase domain CPQ91_11405 PF02557 D-alanyl-D-alanine carboxypeptidase CPQ91_11410 PF01048 Phosphorylase superfamily CPQ91_11415 PF03773 Predicted permease CPQ91_11430 PF14191 YodL-like CPQ91_11435 PF01569 PAP2 superfamily CPQ91_11440 PF14162 YozD-like protein CPQ91_11455 PF06855 YozE SAM-like fold CPQ91_11460 PF14122 YokU-like protein, putative antitoxin CPQ91_11465 PF12544 Lysine-2,3-aminomutase CPQ91_11470 PF00583 Acetyltransferase (GNAT) family CPQ91_11475 PF07687 Peptidase dimerisation domain CPQ91_11475 PF01546 Peptidase family M20/M25/M40 CPQ91_11480 PF01144 Coenzyme A transferase CPQ91_11485 PF01144 Coenzyme A transferase CPQ91_11490 PF00202 Aminotransferase class-III CPQ91_11505 PF00583 Acetyltransferase (GNAT) family CPQ91_11510 PF01641 SelR domain CPQ91_11515 PF01625 Peptide methionine sulfoxide reductase CPQ91_11520 PF01047 MarR family CPQ91_11530 PF07694 5TMR of 5TMR-LYT CPQ91_11530 PF00990 Diguanylate cyclase, GGDEF domain CPQ91_11545 PF17431 Uncharacterized YmpT-like CPQ91_11550 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) CPQ91_11555 PF13472 GDSL-like Lipase/Acylhydrolase family CPQ91_11560 PF02630 SCO1/SenC CPQ91_11565 PF02645 Uncharacterised protein, DegV family COG1307 CPQ91_11570 PF10751 Protein of unknown function (DUF2535) CPQ91_11575 PF00291 Pyridoxal-phosphate dependent enzyme CPQ91_11575 PF00585 C-terminal regulatory domain of Threonine dehydratase CPQ91_11580 PF08461 Ribonuclease R winged-helix domain CPQ91_11580 PF00158 Sigma-54 interaction domain CPQ91_11585 PF03006 Haemolysin-III related CPQ91_11595 PF00186 Dihydrofolate reductase CPQ91_11605 PF04608 Phosphatidylglycerophosphatase A CPQ91_11610 PF14005 YpjP-like protein CPQ91_11620 PF04445 Putative SAM-dependent methyltransferase CPQ91_11625 PF06491 Disulphide isomerase CPQ91_11630 PF00920 Dehydratase family CPQ91_11635 PF13769 Virulence factor CPQ91_11635 PF08712 Scaffold protein Nfu/NifU N terminal CPQ91_11640 PF01966 HD domain CPQ91_11645 PF00255 Glutathione peroxidase CPQ91_11650 PF01268 Formate--tetrahydrofolate ligase CPQ91_11655 PF04204 Homoserine O-succinyltransferase CPQ91_11660 PF00534 Glycosyl transferases group 1 CPQ91_11660 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CPQ91_11670 PF00313 'Cold-shock' DNA-binding domain CPQ91_11685 PF10782 Zinc-finger CPQ91_11690 PF13456 Reverse transcriptase-like CPQ91_11695 PF02592 Putative vitamin uptake transporter CPQ91_11700 PF13456 Reverse transcriptase-like CPQ91_11710 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CPQ91_11710 PF01367 5'-3' exonuclease, C-terminal SAM fold CPQ91_11720 PF10752 Protein of unknown function (DUF2533) CPQ91_11725 PF00350 Dynamin family CPQ91_11735 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CPQ91_11740 PF00195 Chalcone and stilbene synthases, N-terminal domain CPQ91_11740 PF02797 Chalcone and stilbene synthases, C-terminal domain CPQ91_11745 PF00583 Acetyltransferase (GNAT) family CPQ91_11750 PF00860 Permease family CPQ91_11755 PF00156 Phosphoribosyl transferase domain CPQ91_11760 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CPQ91_11765 PF13307 Helicase C-terminal domain CPQ91_11780 PF01170 Putative RNA methylase family UPF0020 CPQ91_11780 PF02926 THUMP domain CPQ91_11790 PF05103 DivIVA protein CPQ91_11795 PF06908 YspA SLOG family CPQ91_11800 PF11122 Inner spore coat protein D CPQ91_11805 PF13482 RNase_H superfamily CPQ91_11810 PF00271 Helicase conserved C-terminal domain CPQ91_11810 PF00270 DEAD/DEAH box helicase CPQ91_11810 PF09369 Domain of unknown function (DUF1998) CPQ91_11815 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CPQ91_11825 PF14179 YppG-like protein CPQ91_11830 PF14178 YppF-like protein CPQ91_11835 PF08807 Bacterial domain of unknown function (DUF1798) CPQ91_11850 PF10720 Protein of unknown function (DUF2515) CPQ91_11855 PF03838 Recombination protein U CPQ91_11860 PF00905 Penicillin binding protein transpeptidase domain CPQ91_11860 PF00912 Transglycosylase CPQ91_11870 PF00633 Helix-hairpin-helix motif CPQ91_11870 PF00730 HhH-GPD superfamily base excision DNA repair protein CPQ91_11870 PF10576 Iron-sulfur binding domain of endonuclease III CPQ91_11875 PF07261 Replication initiation and membrane attachment CPQ91_11880 PF01336 OB-fold nucleic acid binding domain CPQ91_11880 PF00152 tRNA synthetases class II (D, K and N) CPQ91_11885 PF00155 Aminotransferase class I and II CPQ91_11890 PF17881 Domain of unknown function (DUF5590) CPQ91_11890 PF03413 Peptidase propeptide and YPEB domain CPQ91_11895 PF14084 Protein of unknown function (DUF4264) CPQ91_11900 PF13307 Helicase C-terminal domain CPQ91_11900 PF04851 Type III restriction enzyme, res subunit CPQ91_11900 PF00929 Exonuclease CPQ91_11905 PF02261 Aspartate decarboxylase CPQ91_11910 PF02569 Pantoate-beta-alanine ligase CPQ91_11915 PF02548 Ketopantoate hydroxymethyltransferase CPQ91_11925 PF02237 Biotin protein ligase C terminal domain CPQ91_11925 PF08279 HTH domain CPQ91_11925 PF03099 Biotin/lipoate A/B protein ligase family CPQ91_11930 PF01743 Poly A polymerase head domain CPQ91_11930 PF12627 Probable RNA and SrmB- binding site of polymerase A CPQ91_11930 PF13735 tRNA nucleotidyltransferase domain 2 putative CPQ91_11935 PF00534 Glycosyl transferases group 1 CPQ91_11935 PF13439 Glycosyltransferase Family 4 CPQ91_11940 PF02585 GlcNAc-PI de-N-acetylase CPQ91_11945 PF02142 MGS-like domain CPQ91_11950 PF05173 Dihydrodipicolinate reductase, C-terminus CPQ91_11950 PF01113 Dihydrodipicolinate reductase, N-terminus CPQ91_11955 PF03819 MazG nucleotide pyrophosphohydrolase domain CPQ91_11960 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CPQ91_11960 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CPQ91_11965 PF09577 Sporulation protein YpjB (SpoYpjB) CPQ91_11970 PF07187 Protein of unknown function (DUF1405) CPQ91_11975 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CPQ91_11975 PF00032 Cytochrome b(C-terminal)/b6/petD CPQ91_11980 PF00033 Cytochrome b/b6/petB CPQ91_11985 PF00355 Rieske [2Fe-2S] domain CPQ91_11990 PF10673 Protein of unknown function (DUF2487) CPQ91_11995 PF08864 UPF0302 domain CPQ91_11995 PF08858 IDEAL domain CPQ91_12005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPQ91_12010 PF02153 Prephenate dehydrogenase CPQ91_12010 PF01842 ACT domain CPQ91_12015 PF00155 Aminotransferase class I and II CPQ91_12020 PF00290 Tryptophan synthase alpha chain CPQ91_12025 PF00291 Pyridoxal-phosphate dependent enzyme CPQ91_12030 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CPQ91_12035 PF00218 Indole-3-glycerol phosphate synthase CPQ91_12040 PF00591 Glycosyl transferase family, a/b domain CPQ91_12040 PF02885 Glycosyl transferase family, helical bundle domain CPQ91_12045 PF00425 chorismate binding enzyme CPQ91_12045 PF04715 Anthranilate synthase component I, N terminal region CPQ91_12050 PF07736 Chorismate mutase type I CPQ91_12055 PF01761 3-dehydroquinate synthase CPQ91_12060 PF01264 Chorismate synthase CPQ91_12065 PF03705 CheR methyltransferase, all-alpha domain CPQ91_12065 PF01739 CheR methyltransferase, SAM binding domain CPQ91_12070 PF00334 Nucleoside diphosphate kinase CPQ91_12075 PF00348 Polyprenyl synthetase CPQ91_12080 PF01209 ubiE/COQ5 methyltransferase family CPQ91_12085 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 CPQ91_12090 PF02081 Tryptophan RNA-binding attenuator protein CPQ91_12095 PF01227 GTP cyclohydrolase I CPQ91_12100 PF00216 Bacterial DNA-binding protein CPQ91_12105 PF09547 Stage IV sporulation protein A (spore_IV_A) CPQ91_12115 PF10966 Protein of unknown function (DUF2768) CPQ91_12125 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CPQ91_12125 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CPQ91_12130 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CPQ91_12130 PF01926 50S ribosome-binding GTPase CPQ91_12140 PF14045 YIEGIA protein CPQ91_12150 PF14140 YpzI-like protein CPQ91_12155 PF01070 FMN-dependent dehydrogenase CPQ91_12160 PF00575 S1 RNA binding domain CPQ91_12165 PF02224 Cytidylate kinase CPQ91_12170 PF17313 Family of unknown function (DUF5359) CPQ91_12175 PF03413 Peptidase propeptide and YPEB domain CPQ91_12175 PF14620 YpeB sporulation CPQ91_12180 PF07486 Cell Wall Hydrolase CPQ91_12180 PF01471 Putative peptidoglycan binding domain CPQ91_12185 PF13367 PrsW family intramembrane metalloprotease CPQ91_12190 PF00710 Asparaginase, N-terminal CPQ91_12190 PF17763 Glutaminase/Asparaginase C-terminal domain CPQ91_12200 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CPQ91_12200 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CPQ91_12205 PF05389 Negative regulator of genetic competence (MecA) CPQ91_12210 PF00149 Calcineurin-like phosphoesterase CPQ91_12215 PF10864 Protein of unknown function (DUF2663) CPQ91_12220 PF01476 LysM domain CPQ91_12225 PF02517 CPBP intramembrane metalloprotease CPQ91_12230 PF00271 Helicase conserved C-terminal domain CPQ91_12230 PF00270 DEAD/DEAH box helicase CPQ91_12235 PF14493 Helix-turn-helix domain CPQ91_12245 PF12822 ECF transporter, substrate-specific component CPQ91_12250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPQ91_12250 PF01842 ACT domain CPQ91_12250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPQ91_12255 PF04225 Opacity-associated protein A LysM-like domain CPQ91_12255 PF01551 Peptidase family M23 CPQ91_12265 PF08281 Sigma-70, region 4 CPQ91_12265 PF04542 Sigma-70 region 2 CPQ91_12270 PF03816 Cell envelope-related transcriptional attenuator domain CPQ91_12275 PF01522 Polysaccharide deacetylase CPQ91_12285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_12285 PF00512 His Kinase A (phospho-acceptor) domain CPQ91_12290 PF00486 Transcriptional regulatory protein, C terminal CPQ91_12290 PF00072 Response regulator receiver domain CPQ91_12295 PF00672 HAMP domain CPQ91_12295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_12295 PF18698 Histidine kinase sensor domain CPQ91_12295 PF00512 His Kinase A (phospho-acceptor) domain CPQ91_12295 PF00989 PAS fold CPQ91_12300 PF00486 Transcriptional regulatory protein, C terminal CPQ91_12300 PF00072 Response regulator receiver domain CPQ91_12305 PF01578 Cytochrome C assembly protein CPQ91_12310 PF05140 ResB-like family CPQ91_12315 PF00578 AhpC/TSA family CPQ91_12320 PF01479 S4 domain CPQ91_12320 PF00849 RNA pseudouridylate synthase CPQ91_12325 PF07670 Nucleoside recognition CPQ91_12330 PF07670 Nucleoside recognition CPQ91_12335 PF07943 Penicillin-binding protein 5, C-terminal domain CPQ91_12335 PF00768 D-alanyl-D-alanine carboxypeptidase CPQ91_12340 PF13047 Protein of unknown function (DUF3907) CPQ91_12345 PF04079 Segregation and condensation complex subunit ScpB CPQ91_12350 PF02616 Segregation and condensation protein ScpA CPQ91_12360 PF03745 Domain of unknown function (DUF309) CPQ91_12365 PF00583 Acetyltransferase (GNAT) family CPQ91_12370 PF00885 6,7-dimethyl-8-ribityllumazine synthase CPQ91_12375 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CPQ91_12375 PF00925 GTP cyclohydrolase II CPQ91_12380 PF00677 Lumazine binding domain CPQ91_12385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPQ91_12385 PF01872 RibD C-terminal domain CPQ91_12395 PF00149 Calcineurin-like phosphoesterase CPQ91_12400 PF00011 Hsp20/alpha crystallin family CPQ91_12410 PF18801 response regulator aspartate phosphatase H, N terminal CPQ91_12415 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CPQ91_12420 PF06207 Protein of unknown function (DUF1002) CPQ91_12425 PF05908 Poly-gamma-glutamate hydrolase CPQ91_12430 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CPQ91_12430 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CPQ91_12440 PF03323 Bacillus/Clostridium GerA spore germination protein CPQ91_12445 PF14097 Stage V sporulation protein AE1 CPQ91_12450 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CPQ91_12460 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CPQ91_12465 PF13782 Stage V sporulation protein AB CPQ91_12470 PF12164 Stage V sporulation protein AA CPQ91_12475 PF04545 Sigma-70, region 4 CPQ91_12475 PF04542 Sigma-70 region 2 CPQ91_12475 PF04539 Sigma-70 region 3 CPQ91_12480 PF13581 Histidine kinase-like ATPase domain CPQ91_12485 PF01740 STAS domain CPQ91_12490 PF00768 D-alanyl-D-alanine carboxypeptidase CPQ91_12490 PF07943 Penicillin-binding protein 5, C-terminal domain CPQ91_12495 PF01048 Phosphorylase superfamily CPQ91_12500 PF01676 Metalloenzyme superfamily CPQ91_12505 PF00589 Phage integrase family CPQ91_12505 PF02899 Phage integrase, N-terminal SAM-like domain CPQ91_12510 PF14004 Protein of unknown function (DUF4227) CPQ91_12515 PF01475 Ferric uptake regulator family CPQ91_12520 PF01944 Stage II sporulation protein M CPQ91_12525 PF02378 Phosphotransferase system, EIIC CPQ91_12530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPQ91_12545 PF13673 Acetyltransferase (GNAT) domain CPQ91_12555 PF00293 NUDIX domain CPQ91_12560 PF13072 Mother cell inhibitor of FtsZ CPQ91_12565 PF00440 Bacterial regulatory proteins, tetR family CPQ91_12570 PF13564 DoxX-like family CPQ91_12575 PF00248 Aldo/keto reductase family CPQ91_12585 PF12146 Serine aminopeptidase, S33 CPQ91_12590 PF10827 Protein of unknown function (DUF2552) CPQ91_12595 PF01521 Iron-sulphur cluster biosynthesis CPQ91_12610 PF03992 Antibiotic biosynthesis monooxygenase CPQ91_12620 PF01674 Lipase (class 2) CPQ91_12630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CPQ91_12635 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_12640 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_12645 PF00005 ABC transporter CPQ91_12650 PF01554 MatE CPQ91_12660 PF08863 YolD-like protein CPQ91_12665 PF11798 IMS family HHH motif CPQ91_12665 PF11799 impB/mucB/samB family C-terminal domain CPQ91_12665 PF00817 impB/mucB/samB family CPQ91_12670 PF14164 YqzH-like protein CPQ91_12675 PF07690 Major Facilitator Superfamily CPQ91_12685 PF00485 Phosphoribulokinase / Uridine kinase family CPQ91_12700 PF00005 ABC transporter CPQ91_12720 PF05908 Poly-gamma-glutamate hydrolase CPQ91_12730 PF00106 short chain dehydrogenase CPQ91_12735 PF00753 Metallo-beta-lactamase superfamily CPQ91_12740 PF14748 Pyrroline-5-carboxylate reductase dimerisation CPQ91_12740 PF03807 NADP oxidoreductase coenzyme F420-dependent CPQ91_12745 PF01546 Peptidase family M20/M25/M40 CPQ91_12750 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CPQ91_12755 PF12146 Serine aminopeptidase, S33 CPQ91_12760 PF00471 Ribosomal protein L33 CPQ91_12765 PF12706 Beta-lactamase superfamily domain CPQ91_12765 PF00753 Metallo-beta-lactamase superfamily CPQ91_12770 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CPQ91_12770 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CPQ91_12785 PF16868 NMT1-like family CPQ91_12790 PF07702 UTRA domain CPQ91_12790 PF00392 Bacterial regulatory proteins, gntR family CPQ91_12795 PF00232 Glycosyl hydrolase family 1 CPQ91_12800 PF02378 Phosphotransferase system, EIIC CPQ91_12805 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CPQ91_12810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPQ91_12815 PF00245 Alkaline phosphatase CPQ91_12825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CPQ91_12825 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CPQ91_12830 PF00817 impB/mucB/samB family CPQ91_12830 PF11799 impB/mucB/samB family C-terminal domain CPQ91_12830 PF11798 IMS family HHH motif CPQ91_12840 PF02096 60Kd inner membrane protein CPQ91_12845 PF07687 Peptidase dimerisation domain CPQ91_12845 PF01546 Peptidase family M20/M25/M40 CPQ91_12850 PF01039 Carboxyl transferase domain CPQ91_12855 PF06081 Aromatic acid exporter family member 1 CPQ91_12855 PF11728 Putative aromatic acid exporter C-terminal domain CPQ91_12860 PF00005 ABC transporter CPQ91_12865 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_12870 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPQ91_12875 PF06491 Disulphide isomerase CPQ91_12880 PF00781 Diacylglycerol kinase catalytic domain CPQ91_12885 PF02817 e3 binding domain CPQ91_12885 PF00364 Biotin-requiring enzyme CPQ91_12885 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CPQ91_12890 PF02780 Transketolase, C-terminal domain CPQ91_12890 PF02779 Transketolase, pyrimidine binding domain CPQ91_12895 PF00676 Dehydrogenase E1 component CPQ91_12900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPQ91_12900 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPQ91_12905 PF00871 Acetokinase family CPQ91_12910 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CPQ91_12910 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CPQ91_12915 PF01515 Phosphate acetyl/butaryl transferase CPQ91_12920 PF00989 PAS fold CPQ91_12920 PF02954 Bacterial regulatory protein, Fis family CPQ91_12920 PF00158 Sigma-54 interaction domain CPQ91_12925 PF11118 Protein of unknown function (DUF2627) CPQ91_12930 PF03009 Glycerophosphoryl diester phosphodiesterase family CPQ91_12935 PF01520 N-acetylmuramoyl-L-alanine amidase CPQ91_12955 PF06426 Serine acetyltransferase, N-terminal CPQ91_12955 PF00132 Bacterial transferase hexapeptide (six repeats) CPQ91_12965 PF00072 Response regulator receiver domain CPQ91_12965 PF08769 Sporulation initiation factor Spo0A C terminal CPQ91_12970 PF05580 SpoIVB peptidase S55 CPQ91_12970 PF17820 PDZ domain CPQ91_12975 PF13476 AAA domain CPQ91_12980 PF01316 Arginine repressor, DNA binding domain CPQ91_12980 PF02863 Arginine repressor, C-terminal domain CPQ91_12985 PF01728 FtsJ-like methyltransferase CPQ91_12985 PF01479 S4 domain CPQ91_12990 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CPQ91_12990 PF02780 Transketolase, C-terminal domain CPQ91_12990 PF02779 Transketolase, pyrimidine binding domain CPQ91_12995 PF00348 Polyprenyl synthetase CPQ91_13000 PF02609 Exonuclease VII small subunit CPQ91_13005 PF13742 OB-fold nucleic acid binding domain CPQ91_13005 PF02601 Exonuclease VII, large subunit CPQ91_13010 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CPQ91_13010 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CPQ91_13015 PF01029 NusB family CPQ91_13020 PF03780 Asp23 family, cell envelope-related function CPQ91_13025 PF00289 Biotin carboxylase, N-terminal domain CPQ91_13025 PF02785 Biotin carboxylase C-terminal domain CPQ91_13025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPQ91_13030 PF00364 Biotin-requiring enzyme CPQ91_13035 PF12685 SpoIIIAH-like protein CPQ91_13045 PF09581 Stage III sporulation protein AF (Spore_III_AF) CPQ91_13050 PF09546 Stage III sporulation protein AE (spore_III_AE) CPQ91_13055 PF06686 Stage III sporulation protein AC/AD protein family CPQ91_13060 PF06686 Stage III sporulation protein AC/AD protein family CPQ91_13065 PF09548 Stage III sporulation protein AB (spore_III_AB) CPQ91_13075 PF10942 Protein of unknown function (DUF2619) CPQ91_13080 PF01132 Elongation factor P (EF-P) OB domain CPQ91_13080 PF08207 Elongation factor P (EF-P) KOW-like domain CPQ91_13080 PF09285 Elongation factor P, C-terminal CPQ91_13085 PF00557 Metallopeptidase family M24 CPQ91_13085 PF01321 Creatinase/Prolidase N-terminal domain CPQ91_13090 PF01220 Dehydroquinase class II CPQ91_13095 PF11085 Conserved membrane protein YqhR CPQ91_13100 PF07136 Protein of unknown function (DUF1385) CPQ91_13110 PF01734 Patatin-like phospholipase CPQ91_13115 PF01325 Iron dependent repressor, N-terminal DNA binding domain CPQ91_13115 PF02742 Iron dependent repressor, metal binding and dimerisation domain CPQ91_13120 PF03099 Biotin/lipoate A/B protein ligase family CPQ91_13125 PF00581 Rhodanese-like domain CPQ91_13130 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CPQ91_13135 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_13140 PF00005 ABC transporter CPQ91_13140 PF00571 CBS domain CPQ91_13145 PF02347 Glycine cleavage system P-protein CPQ91_13150 PF02347 Glycine cleavage system P-protein CPQ91_13155 PF01571 Aminomethyltransferase folate-binding domain CPQ91_13155 PF08669 Glycine cleavage T-protein C-terminal barrel domain CPQ91_13160 PF00176 SNF2 family N-terminal domain CPQ91_13160 PF00271 Helicase conserved C-terminal domain CPQ91_13165 PF11079 Bacterial protein YqhG of unknown function CPQ91_13170 PF08671 Anti-repressor SinI CPQ91_13175 PF08671 Anti-repressor SinI CPQ91_13175 PF01381 Helix-turn-helix CPQ91_13180 PF12389 Camelysin metallo-endopeptidase CPQ91_13195 PF13028 Protein of unknown function (DUF3889) CPQ91_13200 PF14038 YqzE-like protein CPQ91_13210 PF15980 Putative Competence protein ComGF CPQ91_13220 PF07963 Prokaryotic N-terminal methylation motif CPQ91_13225 PF07963 Prokaryotic N-terminal methylation motif CPQ91_13230 PF00482 Type II secretion system (T2SS), protein F CPQ91_13235 PF00437 Type II/IV secretion system protein CPQ91_13240 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain CPQ91_13240 PF01740 STAS domain CPQ91_13250 PF03960 ArsC family CPQ91_13255 PF11117 Protein of unknown function (DUF2626) CPQ91_13265 PF00753 Metallo-beta-lactamase superfamily CPQ91_13270 PF10958 Protein of unknown function (DUF2759) CPQ91_13275 PF01910 Thiamine-binding protein CPQ91_13285 PF00246 Zinc carboxypeptidase CPQ91_13290 PF01497 Periplasmic binding protein CPQ91_13295 PF00884 Sulfatase CPQ91_13300 PF00480 ROK family CPQ91_13305 PF06014 Bacterial protein of unknown function (DUF910) CPQ91_13310 PF03323 Bacillus/Clostridium GerA spore germination protein CPQ91_13315 PF01694 Rhomboid family CPQ91_13325 PF01812 5-formyltetrahydrofolate cyclo-ligase family CPQ91_13330 PF00471 Ribosomal protein L33 CPQ91_13335 PF00534 Glycosyl transferases group 1 CPQ91_13335 PF13439 Glycosyltransferase Family 4 CPQ91_13355 PF00005 ABC transporter CPQ91_13360 PF00005 ABC transporter CPQ91_13365 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_13370 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_13375 PF12849 PBP superfamily domain CPQ91_13385 PF07690 Major Facilitator Superfamily CPQ91_13390 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CPQ91_13390 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CPQ91_13395 PF04306 Protein of unknown function (DUF456) CPQ91_13400 PF06691 Protein of unknown function (DUF1189) CPQ91_13410 PF04551 GcpE protein CPQ91_13425 PF01475 Ferric uptake regulator family CPQ91_13430 PF00950 ABC 3 transport family CPQ91_13435 PF00005 ABC transporter CPQ91_13440 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CPQ91_13440 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CPQ91_13445 PF11116 Protein of unknown function (DUF2624) CPQ91_13450 PF01261 Xylose isomerase-like TIM barrel CPQ91_13455 PF00270 DEAD/DEAH box helicase CPQ91_13455 PF00271 Helicase conserved C-terminal domain CPQ91_13465 PF02401 LytB protein CPQ91_13470 PF01784 NIF3 (NGG1p interacting factor 3) CPQ91_13475 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CPQ91_13480 PF04493 Endonuclease V CPQ91_13485 PF04493 Endonuclease V CPQ91_13525 PF04740 LXG domain of WXG superfamily CPQ91_13525 PF14431 YwqJ-like deaminase CPQ91_13525 PF14449 Pre-toxin TG CPQ91_13540 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CPQ91_13545 PF04539 Sigma-70 region 3 CPQ91_13545 PF00140 Sigma-70 factor, region 1.2 CPQ91_13545 PF04542 Sigma-70 region 2 CPQ91_13545 PF04545 Sigma-70, region 4 CPQ91_13545 PF03979 Sigma-70 factor, region 1.1 CPQ91_13550 PF01807 CHC2 zinc finger CPQ91_13550 PF08275 DNA primase catalytic core, N-terminal domain CPQ91_13550 PF10410 DnaB-helicase binding domain of primase CPQ91_13555 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CPQ91_13560 PF03618 Kinase/pyrophosphorylase CPQ91_13565 PF00571 CBS domain CPQ91_13565 PF08279 HTH domain CPQ91_13570 PF02092 Glycyl-tRNA synthetase beta subunit CPQ91_13575 PF02091 Glycyl-tRNA synthetase alpha subunit CPQ91_13580 PF11967 Recombination protein O N terminal CPQ91_13580 PF02565 Recombination protein O C terminal CPQ91_13585 PF14006 YqzL-like protein CPQ91_13590 PF07650 KH domain CPQ91_13590 PF01926 50S ribosome-binding GTPase CPQ91_13595 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPQ91_13600 PF01219 Prokaryotic diacylglycerol kinase CPQ91_13605 PF02130 Uncharacterized protein family UPF0054 CPQ91_13610 PF07698 7TM receptor with intracellular HD hydrolase CPQ91_13610 PF07697 7TM-HD extracellular CPQ91_13610 PF01966 HD domain CPQ91_13615 PF02562 PhoH-like protein CPQ91_13620 PF06898 Putative stage IV sporulation protein YqfD CPQ91_13625 PF07873 YabP family CPQ91_13635 PF12127 SigmaW regulon antibacterial CPQ91_13640 PF01957 NfeD-like C-terminal, partner-binding CPQ91_13640 PF01972 Serine dehydrogenase proteinase CPQ91_13645 PF09424 Yqey-like protein CPQ91_13650 PF01165 Ribosomal protein S21 CPQ91_13655 PF02690 Na+/Pi-cotransporter CPQ91_13660 PF01791 DeoC/LacD family aldolase CPQ91_13665 PF00919 Uncharacterized protein family UPF0004 CPQ91_13665 PF01938 TRAM domain CPQ91_13665 PF04055 Radical SAM superfamily CPQ91_13670 PF04452 RNA methyltransferase CPQ91_13680 PF00684 DnaJ central domain CPQ91_13680 PF01556 DnaJ C terminal domain CPQ91_13680 PF00226 DnaJ domain CPQ91_13685 PF00012 Hsp70 protein CPQ91_13690 PF01025 GrpE CPQ91_13695 PF01628 HrcA protein C terminal domain CPQ91_13700 PF06969 HemN C-terminal domain CPQ91_13700 PF04055 Radical SAM superfamily CPQ91_13705 PF00679 Elongation factor G C-terminus CPQ91_13705 PF00009 Elongation factor Tu GTP binding domain CPQ91_13705 PF03144 Elongation factor Tu domain 2 CPQ91_13705 PF06421 GTP-binding protein LepA C-terminus CPQ91_13710 PF12438 Protein of unknown function (DUF3679) CPQ91_13715 PF07454 Stage II sporulation protein P (SpoIIP) CPQ91_13720 PF03418 Germination protease CPQ91_13725 PF01649 Ribosomal protein S20 CPQ91_13730 PF06144 DNA polymerase III, delta subunit CPQ91_13735 PF14141 YqzM-like protein CPQ91_13740 PF03772 Competence protein CPQ91_13740 PF13567 Domain of unknown function (DUF4131) CPQ91_13740 PF00753 Metallo-beta-lactamase superfamily CPQ91_13745 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPQ91_13750 PF10531 SLBB domain CPQ91_13755 PF14748 Pyrroline-5-carboxylate reductase dimerisation CPQ91_13755 PF03807 NADP oxidoreductase coenzyme F420-dependent CPQ91_13760 PF13649 Methyltransferase domain CPQ91_13770 PF01966 HD domain CPQ91_13775 PF01467 Cytidylyltransferase-like CPQ91_13780 PF01985 CRS1 / YhbY (CRM) domain CPQ91_13785 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CPQ91_13785 PF08501 Shikimate dehydrogenase substrate binding domain CPQ91_13785 PF01488 Shikimate / quinate 5-dehydrogenase CPQ91_13790 PF01926 50S ribosome-binding GTPase CPQ91_13800 PF08970 Sporulation inhibitor A CPQ91_13805 PF00657 GDSL-like Lipase/Acylhydrolase CPQ91_13810 PF12746 GNAT acetyltransferase CPQ91_13815 PF10057 Uncharacterized conserved protein (DUF2294) CPQ91_13820 PF01568 Molydopterin dinucleotide binding domain CPQ91_13820 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPQ91_13820 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CPQ91_13820 PF00384 Molybdopterin oxidoreductase CPQ91_13820 PF00037 4Fe-4S binding domain CPQ91_13825 PF07849 Protein of unknown function (DUF1641) CPQ91_13835 PF04545 Sigma-70, region 4 CPQ91_13835 PF04542 Sigma-70 region 2 CPQ91_13845 PF00005 ABC transporter CPQ91_13860 PF07454 Stage II sporulation protein P (SpoIIP) CPQ91_13865 PF04542 Sigma-70 region 2 CPQ91_13865 PF04545 Sigma-70, region 4 CPQ91_13900 PF00005 ABC transporter CPQ91_13905 PF02687 FtsX-like permease family CPQ91_13910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_13910 PF00672 HAMP domain CPQ91_13910 PF00512 His Kinase A (phospho-acceptor) domain CPQ91_13915 PF00072 Response regulator receiver domain CPQ91_13915 PF00486 Transcriptional regulatory protein, C terminal CPQ91_13925 PF11122 Inner spore coat protein D CPQ91_13955 PF17094 Uncharacterised protein family (UPF0715) CPQ91_13980 PF16123 Hydroxyacylglutathione hydrolase C-terminus CPQ91_13980 PF00753 Metallo-beta-lactamase superfamily CPQ91_13990 PF00072 Response regulator receiver domain CPQ91_13990 PF00196 Bacterial regulatory proteins, luxR family CPQ91_13995 PF07730 Histidine kinase CPQ91_13995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_14000 PF00085 Thioredoxin CPQ91_14005 PF01925 Sulfite exporter TauE/SafE CPQ91_14010 PF01206 Sulfurtransferase TusA CPQ91_14015 PF00581 Rhodanese-like domain CPQ91_14015 PF00753 Metallo-beta-lactamase superfamily CPQ91_14020 PF00581 Rhodanese-like domain CPQ91_14020 PF01206 Sulfurtransferase TusA CPQ91_14025 PF13686 DsrE/DsrF/DrsH-like family CPQ91_14030 PF02583 Metal-sensitive transcriptional repressor CPQ91_14070 PF01809 Putative membrane protein insertion efficiency factor CPQ91_14075 PF00490 Delta-aminolevulinic acid dehydratase CPQ91_14080 PF01380 SIS domain CPQ91_14085 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CPQ91_14090 PF01638 HxlR-like helix-turn-helix CPQ91_14095 PF00487 Fatty acid desaturase CPQ91_14100 PF07730 Histidine kinase CPQ91_14105 PF00196 Bacterial regulatory proteins, luxR family CPQ91_14105 PF00072 Response regulator receiver domain CPQ91_14110 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPQ91_14115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CPQ91_14120 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_14130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CPQ91_14130 PF00005 ABC transporter CPQ91_14135 PF00005 ABC transporter CPQ91_14135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CPQ91_14150 PF12833 Helix-turn-helix domain CPQ91_14150 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CPQ91_14155 PF00106 short chain dehydrogenase CPQ91_14170 PF00067 Cytochrome P450 CPQ91_14175 PF01925 Sulfite exporter TauE/SafE CPQ91_14190 PF00106 short chain dehydrogenase CPQ91_14195 PF08244 Glycosyl hydrolases family 32 C terminal CPQ91_14195 PF00251 Glycosyl hydrolases family 32 N-terminal domain CPQ91_14200 PF03613 PTS system mannose/fructose/sorbose family IID component CPQ91_14205 PF03609 PTS system sorbose-specific iic component CPQ91_14210 PF03830 PTS system sorbose subfamily IIB component CPQ91_14215 PF03610 PTS system fructose IIA component CPQ91_14220 PF00158 Sigma-54 interaction domain CPQ91_14220 PF00874 PRD domain CPQ91_14220 PF03610 PTS system fructose IIA component CPQ91_14230 PF14145 YrhK-like protein CPQ91_14235 PF00302 Chloramphenicol acetyltransferase CPQ91_14240 PF02805 Metal binding domain of Ada CPQ91_14240 PF12833 Helix-turn-helix domain CPQ91_14245 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CPQ91_14245 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CPQ91_14250 PF00248 Aldo/keto reductase family CPQ91_14255 PF07690 Major Facilitator Superfamily CPQ91_14260 PF01638 HxlR-like helix-turn-helix CPQ91_14265 PF03575 Peptidase family S51 CPQ91_14270 PF02602 Uroporphyrinogen-III synthase HemD CPQ91_14280 PF01497 Periplasmic binding protein CPQ91_14285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPQ91_14285 PF03466 LysR substrate binding domain CPQ91_14290 PF07690 Major Facilitator Superfamily CPQ91_14300 PF00667 FAD binding domain CPQ91_14300 PF00067 Cytochrome P450 CPQ91_14300 PF00258 Flavodoxin CPQ91_14300 PF00175 Oxidoreductase NAD-binding domain CPQ91_14305 PF16295 Tetracyclin repressor-like, C-terminal domain CPQ91_14305 PF00440 Bacterial regulatory proteins, tetR family CPQ91_14310 PF00082 Subtilase family CPQ91_14310 PF17936 Bacterial Ig domain CPQ91_14315 PF08241 Methyltransferase domain CPQ91_14330 PF09501 Probable sporulation protein (Bac_small_yrzI) CPQ91_14335 PF14143 YrhC-like protein CPQ91_14340 PF01053 Cys/Met metabolism PLP-dependent enzyme CPQ91_14345 PF00291 Pyridoxal-phosphate dependent enzyme CPQ91_14350 PF01048 Phosphorylase superfamily CPQ91_14355 PF13649 Methyltransferase domain CPQ91_14360 PF10750 Protein of unknown function (DUF2536) CPQ91_14365 PF07423 Domain of unknown function (DUF1510) CPQ91_14370 PF03717 Penicillin-binding Protein dimerisation domain CPQ91_14370 PF00905 Penicillin binding protein transpeptidase domain CPQ91_14375 PF01272 Transcription elongation factor, GreA/GreB, C-term CPQ91_14375 PF03449 Transcription elongation factor, N-terminal CPQ91_14380 PF00485 Phosphoribulokinase / Uridine kinase family CPQ91_14400 PF02618 YceG-like family CPQ91_14405 PF06949 Protein of unknown function (DUF1292) CPQ91_14410 PF03652 Holliday junction resolvase CPQ91_14415 PF06135 IreB regulatory phosphoprotein CPQ91_14420 PF01411 tRNA synthetases class II (A) CPQ91_14420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPQ91_14420 PF02272 DHHA1 domain CPQ91_14425 PF01594 AI-2E family transporter CPQ91_14430 PF13056 Protein of unknown function (DUF3918) CPQ91_14440 PF05239 PRC-barrel domain CPQ91_14445 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CPQ91_14445 PF14490 Helix-hairpin-helix containing domain CPQ91_14445 PF13538 UvrD-like helicase C-terminal domain CPQ91_14450 PF07719 Tetratricopeptide repeat CPQ91_14450 PF13181 Tetratricopeptide repeat CPQ91_14460 PF00266 Aminotransferase class-V CPQ91_14465 PF02082 Transcriptional regulator CPQ91_14470 PF05496 Holliday junction DNA helicase RuvB P-loop domain CPQ91_14470 PF12002 MgsA AAA+ ATPase C terminal CPQ91_14470 PF16193 AAA C-terminal domain CPQ91_14475 PF00899 ThiF family CPQ91_14485 PF02938 GAD domain CPQ91_14485 PF01336 OB-fold nucleic acid binding domain CPQ91_14485 PF00152 tRNA synthetases class II (D, K and N) CPQ91_14490 PF03129 Anticodon binding domain CPQ91_14490 PF13393 Histidyl-tRNA synthetase CPQ91_14500 PF08239 Bacterial SH3 domain CPQ91_14500 PF01520 N-acetylmuramoyl-L-alanine amidase CPQ91_14505 PF02580 D-Tyr-tRNA(Tyr) deacylase CPQ91_14510 PF04607 Region found in RelA / SpoT proteins CPQ91_14510 PF13291 ACT domain CPQ91_14510 PF02824 TGS domain CPQ91_14515 PF00156 Phosphoribosyl transferase domain CPQ91_14520 PF02272 DHHA1 domain CPQ91_14520 PF01368 DHH family CPQ91_14520 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CPQ91_14520 PF17768 RecJ OB domain CPQ91_14525 PF06305 Lipopolysaccharide assembly protein A domain CPQ91_14530 PF02355 Protein export membrane protein CPQ91_14530 PF07549 SecD/SecF GG Motif CPQ91_14535 PF13797 Post-transcriptional regulator CPQ91_14540 PF01943 Polysaccharide biosynthesis protein CPQ91_14540 PF14667 Polysaccharide biosynthesis C-terminal domain CPQ91_14545 PF04239 Protein of unknown function (DUF421) CPQ91_14550 PF12670 Protein of unknown function (DUF3792) CPQ91_14555 PF02699 Preprotein translocase subunit CPQ91_14560 PF01702 Queuine tRNA-ribosyltransferase CPQ91_14565 PF02547 Queuosine biosynthesis protein CPQ91_14570 PF11146 Protein of unknown function (DUF2905) CPQ91_14575 PF05496 Holliday junction DNA helicase RuvB P-loop domain CPQ91_14575 PF05491 RuvB C-terminal winged helix domain CPQ91_14575 PF17864 RuvB AAA lid domain CPQ91_14580 PF01330 RuvA N terminal domain CPQ91_14580 PF07499 RuvA, C-terminal domain CPQ91_14585 PF08977 Bypass of Forespore C, N terminal CPQ91_14585 PF08955 BofC C-terminal domain CPQ91_14595 PF08141 Small acid-soluble spore protein H family CPQ91_14600 PF05163 DinB family CPQ91_14605 PF05908 Poly-gamma-glutamate hydrolase CPQ91_14620 PF01709 Transcriptional regulator CPQ91_14625 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CPQ91_14630 PF01476 LysM domain CPQ91_14635 PF02445 Quinolinate synthetase A protein CPQ91_14640 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CPQ91_14640 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CPQ91_14645 PF00890 FAD binding domain CPQ91_14645 PF02910 Fumarate reductase flavoprotein C-term CPQ91_14650 PF00266 Aminotransferase class-V CPQ91_14655 PF02829 3H domain CPQ91_14655 PF08279 HTH domain CPQ91_14660 PF00800 Prephenate dehydratase CPQ91_14660 PF01842 ACT domain CPQ91_14665 PF01842 ACT domain CPQ91_14670 PF01926 50S ribosome-binding GTPase CPQ91_14670 PF01018 GTP1/OBG CPQ91_14670 PF09269 Domain of unknown function (DUF1967) CPQ91_14675 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CPQ91_14675 PF14682 Sporulation initiation phospho-transferase B, C-terminal CPQ91_14680 PF01016 Ribosomal L27 protein CPQ91_14685 PF04327 Cysteine protease Prp CPQ91_14690 PF00829 Ribosomal prokaryotic L21 protein CPQ91_14695 PF02163 Peptidase family M50 CPQ91_14700 PF01551 Peptidase family M23 CPQ91_14705 PF08327 Activator of Hsp90 ATPase homolog 1-like protein CPQ91_14710 PF01022 Bacterial regulatory protein, arsR family CPQ91_14715 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CPQ91_14720 PF03775 Septum formation inhibitor MinC, C-terminal domain CPQ91_14725 PF04093 rod shape-determining protein MreD CPQ91_14730 PF04085 rod shape-determining protein MreC CPQ91_14750 PF08863 YolD-like protein CPQ91_14755 PF18801 response regulator aspartate phosphatase H, N terminal CPQ91_14760 PF04740 LXG domain of WXG superfamily CPQ91_14760 PF14449 Pre-toxin TG CPQ91_14780 PF02915 Rubrerythrin CPQ91_14790 PF07883 Cupin domain CPQ91_14795 PF01183 Glycosyl hydrolases family 25 CPQ91_14795 PF08239 Bacterial SH3 domain CPQ91_14800 PF04688 SPP1 phage holin CPQ91_14805 PF10779 Haemolysin XhlA CPQ91_14825 PF12708 Pectate lyase superfamily protein CPQ91_14825 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain CPQ91_14830 PF13457 GW (Gly-Tryp) dipeptide domain CPQ91_14830 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CPQ91_14840 PF01464 Transglycosylase SLT domain CPQ91_14885 PF00574 Clp protease CPQ91_14900 PF03354 Phage Terminase CPQ91_14990 PF08671 Anti-repressor SinI CPQ91_14990 PF01381 Helix-turn-helix CPQ91_15000 PF00239 Resolvase, N terminal domain CPQ91_15000 PF02796 Helix-turn-helix domain of resolvase CPQ91_15005 PF04002 RadC-like JAB domain CPQ91_15010 PF02545 Maf-like protein CPQ91_15015 PF05036 Sporulation related domain CPQ91_15020 PF01478 Type IV leader peptidase family CPQ91_15020 PF06750 Bacterial Peptidase A24 N-terminal domain CPQ91_15025 PF08245 Mur ligase middle domain CPQ91_15025 PF02875 Mur ligase family, glutamate ligase domain CPQ91_15030 PF08264 Anticodon-binding domain of tRNA CPQ91_15030 PF00133 tRNA synthetases class I (I, L, M and V) CPQ91_15030 PF10458 Valyl tRNA synthetase tRNA binding arm CPQ91_15045 PF01476 LysM domain CPQ91_15050 PF00202 Aminotransferase class-III CPQ91_15055 PF00490 Delta-aminolevulinic acid dehydratase CPQ91_15060 PF02602 Uroporphyrinogen-III synthase HemD CPQ91_15065 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CPQ91_15065 PF03900 Porphobilinogen deaminase, C-terminal domain CPQ91_15070 PF01578 Cytochrome C assembly protein CPQ91_15075 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CPQ91_15075 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CPQ91_15075 PF01488 Shikimate / quinate 5-dehydrogenase CPQ91_15085 PF01926 50S ribosome-binding GTPase CPQ91_15090 PF00004 ATPase family associated with various cellular activities (AAA) CPQ91_15090 PF05362 Lon protease (S16) C-terminal proteolytic domain CPQ91_15090 PF02190 ATP-dependent protease La (LON) substrate-binding domain CPQ91_15095 PF00004 ATPase family associated with various cellular activities (AAA) CPQ91_15095 PF05362 Lon protease (S16) C-terminal proteolytic domain CPQ91_15100 PF07724 AAA domain (Cdc48 subfamily) CPQ91_15100 PF06689 ClpX C4-type zinc finger CPQ91_15100 PF10431 C-terminal, D2-small domain, of ClpB protein CPQ91_15105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CPQ91_15105 PF05698 Bacterial trigger factor protein (TF) C-terminus CPQ91_15105 PF05697 Bacterial trigger factor protein (TF) CPQ91_15115 PF00694 Aconitase C-terminal domain CPQ91_15120 PF00330 Aconitase family (aconitate hydratase) CPQ91_15125 PF00180 Isocitrate/isopropylmalate dehydrogenase CPQ91_15130 PF00682 HMGL-like CPQ91_15130 PF08502 LeuA allosteric (dimerisation) domain CPQ91_15135 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CPQ91_15135 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CPQ91_15140 PF10369 Small subunit of acetolactate synthase CPQ91_15140 PF01842 ACT domain CPQ91_15145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPQ91_15145 PF00205 Thiamine pyrophosphate enzyme, central domain CPQ91_15145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CPQ91_15155 PF01063 Amino-transferase class IV CPQ91_15165 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CPQ91_15165 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CPQ91_15185 PF04860 Phage portal protein CPQ91_15215 PF00145 C-5 cytosine-specific DNA methylase CPQ91_15230 PF04634 Protein of unknown function, DUF600 CPQ91_15235 PF04740 LXG domain of WXG superfamily CPQ91_15240 PF18801 response regulator aspartate phosphatase H, N terminal CPQ91_15260 PF12850 Calcineurin-like phosphoesterase superfamily domain CPQ91_15265 PF01725 Ham1 family CPQ91_15270 PF01138 3' exoribonuclease family, domain 1 CPQ91_15270 PF03725 3' exoribonuclease family, domain 2 CPQ91_15275 PF10646 Sporulation and spore germination CPQ91_15280 PF01177 Asp/Glu/Hydantoin racemase CPQ91_15285 PF01047 MarR family CPQ91_15290 PF00196 Bacterial regulatory proteins, luxR family CPQ91_15300 PF03061 Thioesterase superfamily CPQ91_15305 PF13085 2Fe-2S iron-sulfur cluster binding domain CPQ91_15305 PF13183 4Fe-4S dicluster domain CPQ91_15310 PF02910 Fumarate reductase flavoprotein C-term CPQ91_15310 PF00890 FAD binding domain CPQ91_15315 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CPQ91_15320 PF10702 Protein of unknown function (DUF2507) CPQ91_15325 PF13840 ACT domain CPQ91_15325 PF01842 ACT domain CPQ91_15325 PF00696 Amino acid kinase family CPQ91_15330 PF01541 GIY-YIG catalytic domain CPQ91_15330 PF08459 UvrC Helix-hairpin-helix N-terminal CPQ91_15330 PF02151 UvrB/uvrC motif CPQ91_15335 PF00085 Thioredoxin CPQ91_15340 PF01012 Electron transfer flavoprotein domain CPQ91_15340 PF00766 Electron transfer flavoprotein FAD-binding domain CPQ91_15345 PF01012 Electron transfer flavoprotein domain CPQ91_15350 PF00378 Enoyl-CoA hydratase/isomerase CPQ91_15355 PF08359 YsiA-like protein, C-terminal region CPQ91_15355 PF00440 Bacterial regulatory proteins, tetR family CPQ91_15360 PF00501 AMP-binding enzyme CPQ91_15360 PF13193 AMP-binding enzyme C-terminal domain CPQ91_15365 PF03994 Domain of Unknown Function (DUF350) CPQ91_15370 PF01713 Smr domain CPQ91_15370 PF00488 MutS domain V CPQ91_15375 PF14791 DNA polymerase beta thumb CPQ91_15375 PF14716 Helix-hairpin-helix domain CPQ91_15375 PF02811 PHP domain CPQ91_15380 PF02674 Colicin V production protein CPQ91_15385 PF05164 Cell division protein ZapA CPQ91_15390 PF01351 Ribonuclease HII CPQ91_15390 PF11858 Domain of unknown function (DUF3378) CPQ91_15415 PF12399 Branched-chain amino acid ATP-binding cassette transporter CPQ91_15415 PF00005 ABC transporter CPQ91_15430 PF03484 tRNA synthetase B5 domain CPQ91_15430 PF03147 Ferredoxin-fold anticodon binding domain CPQ91_15430 PF01588 Putative tRNA binding domain CPQ91_15430 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CPQ91_15430 PF03483 B3/4 domain CPQ91_15435 PF01409 tRNA synthetases class II core domain (F) CPQ91_15435 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CPQ91_15440 PF08032 RNA 2'-O ribose methyltransferase substrate binding CPQ91_15440 PF00588 SpoU rRNA Methylase family CPQ91_15445 PF14098 Small, acid-soluble spore protein I CPQ91_15450 PF13722 5TM C-terminal transporter carbon starvation CstA CPQ91_15450 PF02554 Carbon starvation protein CstA CPQ91_15460 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CPQ91_15465 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_15470 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_15475 PF01547 Bacterial extracellular solute-binding protein CPQ91_15480 PF13685 Iron-containing alcohol dehydrogenase CPQ91_15485 PF00596 Class II Aldolase and Adducin N-terminal domain CPQ91_15490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CPQ91_15490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CPQ91_15495 PF02610 L-arabinose isomerase CPQ91_15495 PF11762 L-arabinose isomerase C-terminal domain CPQ91_15500 PF04616 Glycosyl hydrolases family 43 CPQ91_15505 PF05343 M42 glutamyl aminopeptidase CPQ91_15515 PF06961 Protein of unknown function (DUF1294) CPQ91_15520 PF00453 Ribosomal protein L20 CPQ91_15525 PF01632 Ribosomal protein L35 CPQ91_15530 PF05198 Translation initiation factor IF-3, N-terminal domain CPQ91_15530 PF00707 Translation initiation factor IF-3, C-terminal domain CPQ91_15535 PF04172 LrgB-like family CPQ91_15540 PF03788 LrgA family CPQ91_15545 PF16655 PhoD-like phosphatase, N-terminal domain CPQ91_15545 PF09423 PhoD-like phosphatase CPQ91_15550 PF04397 LytTr DNA-binding domain CPQ91_15550 PF00072 Response regulator receiver domain CPQ91_15555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_15555 PF07694 5TMR of 5TMR-LYT CPQ91_15555 PF06580 Histidine kinase CPQ91_15570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPQ91_15570 PF03129 Anticodon binding domain CPQ91_15570 PF02824 TGS domain CPQ91_15570 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPQ91_15575 PF08812 YtxC-like family CPQ91_15580 PF09335 SNARE associated Golgi protein CPQ91_15585 PF01695 IstB-like ATP binding protein CPQ91_15585 PF07319 Primosomal protein DnaI N-terminus CPQ91_15590 PF07261 Replication initiation and membrane attachment CPQ91_15595 PF03477 ATP cone domain CPQ91_15610 PF02675 S-adenosylmethionine decarboxylase CPQ91_15615 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CPQ91_15615 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPQ91_15625 PF01121 Dephospho-CoA kinase CPQ91_15630 PF02659 Putative manganese efflux pump CPQ91_15635 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CPQ91_15635 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CPQ91_15635 PF06827 Zinc finger found in FPG and IleRS CPQ91_15640 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CPQ91_15640 PF00476 DNA polymerase family A CPQ91_15640 PF01367 5'-3' exonuclease, C-terminal SAM fold CPQ91_15645 PF16736 Single Cache-like CPQ91_15645 PF00989 PAS fold CPQ91_15645 PF00512 His Kinase A (phospho-acceptor) domain CPQ91_15645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_15650 PF00486 Transcriptional regulatory protein, C terminal CPQ91_15650 PF00072 Response regulator receiver domain CPQ91_15655 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CPQ91_15655 PF00056 lactate/malate dehydrogenase, NAD binding domain CPQ91_15660 PF00180 Isocitrate/isopropylmalate dehydrogenase CPQ91_15665 PF00285 Citrate synthase, C-terminal domain CPQ91_15670 PF04284 Protein of unknown function (DUF441) CPQ91_15675 PF01594 AI-2E family transporter CPQ91_15680 PF04186 FxsA cytoplasmic membrane protein CPQ91_15685 PF02887 Pyruvate kinase, alpha/beta domain CPQ91_15685 PF00391 PEP-utilising enzyme, mobile domain CPQ91_15685 PF00224 Pyruvate kinase, barrel domain CPQ91_15690 PF00365 Phosphofructokinase CPQ91_15695 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CPQ91_15700 PF01039 Carboxyl transferase domain CPQ91_15700 PF17848 Acetyl-coA carboxylase zinc finger domain CPQ91_15705 PF00390 Malic enzyme, N-terminal domain CPQ91_15705 PF03949 Malic enzyme, NAD binding domain CPQ91_15710 PF02811 PHP domain CPQ91_15710 PF01336 OB-fold nucleic acid binding domain CPQ91_15710 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPQ91_15710 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPQ91_15710 PF14579 Helix-hairpin-helix motif CPQ91_15715 PF14034 Sporulation protein YtrH CPQ91_15730 PF01368 DHH family CPQ91_15730 PF02272 DHHA1 domain CPQ91_15735 PF14007 YtpI-like protein CPQ91_15740 PF03061 Thioesterase superfamily CPQ91_15740 PF07085 DRTGG domain CPQ91_15740 PF00571 CBS domain CPQ91_15740 PF00392 Bacterial regulatory proteins, gntR family CPQ91_15745 PF03551 Transcriptional regulator PadR-like family CPQ91_15745 PF10400 Virulence activator alpha C-term CPQ91_15760 PF14698 Argininosuccinate lyase C-terminal CPQ91_15760 PF00206 Lyase CPQ91_15765 PF00764 Arginosuccinate synthase CPQ91_15770 PF00994 Probable molybdopterin binding domain CPQ91_15775 PF00871 Acetokinase family CPQ91_15780 PF02384 N-6 DNA Methylase CPQ91_15785 PF08534 Redoxin CPQ91_15790 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CPQ91_15795 PF11167 Protein of unknown function (DUF2953) CPQ91_15800 PF06271 RDD family CPQ91_15805 PF01343 Peptidase family S49 CPQ91_15810 PF01513 ATP-NAD kinase CPQ91_15830 PF00501 AMP-binding enzyme CPQ91_15830 PF13193 AMP-binding enzyme C-terminal domain CPQ91_15835 PF00269 Small, acid-soluble spore proteins, alpha/beta type CPQ91_15840 PF02926 THUMP domain CPQ91_15840 PF02568 Thiamine biosynthesis protein (ThiI) CPQ91_15845 PF00266 Aminotransferase class-V CPQ91_15850 PF05525 Branched-chain amino acid transport protein CPQ91_15855 PF06160 Septation ring formation regulator, EzrA CPQ91_15860 PF02811 PHP domain CPQ91_15865 PF00440 Bacterial regulatory proteins, tetR family CPQ91_15870 PF13185 GAF domain CPQ91_15885 PF01479 S4 domain CPQ91_15885 PF00163 Ribosomal protein S4/S9 N-terminal domain CPQ91_15900 PF05656 Protein of unknown function (DUF805) CPQ91_15905 PF12706 Beta-lactamase superfamily domain CPQ91_15910 PF01037 Lrp/AsnC ligand binding domain CPQ91_15915 PF01479 S4 domain CPQ91_15915 PF00579 tRNA synthetases class I (W and Y) CPQ91_15920 PF00501 AMP-binding enzyme CPQ91_15920 PF13193 AMP-binding enzyme C-terminal domain CPQ91_15925 PF00583 Acetyltransferase (GNAT) family CPQ91_15930 PF00571 CBS domain CPQ91_15935 PF00850 Histone deacetylase domain CPQ91_15940 PF13677 Membrane MotB of proton-channel complex MotA/MotB CPQ91_15940 PF00691 OmpA family CPQ91_15945 PF01618 MotA/TolQ/ExbB proton channel family CPQ91_15950 PF00356 Bacterial regulatory proteins, lacI family CPQ91_15955 PF01817 Chorismate mutase type II CPQ91_15955 PF00793 DAHP synthetase I family CPQ91_15965 PF11009 Protein of unknown function (DUF2847) CPQ91_15970 PF12732 YtxH-like protein CPQ91_15975 PF06103 Bacterial protein of unknown function (DUF948) CPQ91_15980 PF01225 Mur ligase family, catalytic domain CPQ91_15980 PF02875 Mur ligase family, glutamate ligase domain CPQ91_15980 PF08245 Mur ligase middle domain CPQ91_15985 PF01580 FtsK/SpoIIIE family CPQ91_15985 PF09397 Ftsk gamma domain CPQ91_15985 PF17854 FtsK alpha domain CPQ91_15990 PF01588 Putative tRNA binding domain CPQ91_15990 PF14794 Domain of unknown function (DUF4479) CPQ91_15995 PF07285 Protein of unknown function (DUF1444) CPQ91_16000 PF00085 Thioredoxin CPQ91_16005 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ CPQ91_16010 PF05343 M42 glutamyl aminopeptidase CPQ91_16015 PF03413 Peptidase propeptide and YPEB domain CPQ91_16020 PF03949 Malic enzyme, NAD binding domain CPQ91_16020 PF00390 Malic enzyme, N-terminal domain CPQ91_16025 PF00753 Metallo-beta-lactamase superfamily CPQ91_16030 PF02390 Putative methyltransferase CPQ91_16035 PF14165 YtzH-like protein CPQ91_16040 PF01636 Phosphotransferase enzyme family CPQ91_16045 PF17999 Pullulanase N1-terminal domain CPQ91_16045 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CPQ91_16045 PF00128 Alpha amylase, catalytic domain CPQ91_16050 PF00781 Diacylglycerol kinase catalytic domain CPQ91_16065 PF00291 Pyridoxal-phosphate dependent enzyme CPQ91_16080 PF01546 Peptidase family M20/M25/M40 CPQ91_16085 PF00860 Permease family CPQ91_16090 PF08220 DeoR-like helix-turn-helix domain CPQ91_16095 PF00849 RNA pseudouridylate synthase CPQ91_16095 PF01479 S4 domain CPQ91_16100 PF14667 Polysaccharide biosynthesis C-terminal domain CPQ91_16100 PF01943 Polysaccharide biosynthesis protein CPQ91_16110 PF02028 BCCT, betaine/carnitine/choline family transporter CPQ91_16115 PF10957 Sporulation protein Cse60 CPQ91_16120 PF00581 Rhodanese-like domain CPQ91_16125 PF18801 response regulator aspartate phosphatase H, N terminal CPQ91_16135 PF04854 Protein of unknown function, DUF624 CPQ91_16140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CPQ91_16140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CPQ91_16150 PF07470 Glycosyl Hydrolase Family 88 CPQ91_16155 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_16160 PF12833 Helix-turn-helix domain CPQ91_16160 PF17853 GGDEF-like domain CPQ91_16165 PF13416 Bacterial extracellular solute-binding protein CPQ91_16170 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_16175 PF01370 NAD dependent epimerase/dehydratase family CPQ91_16180 PF01738 Dienelactone hydrolase family CPQ91_16190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPQ91_16190 PF03466 LysR substrate binding domain CPQ91_16195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPQ91_16200 PF00133 tRNA synthetases class I (I, L, M and V) CPQ91_16200 PF08264 Anticodon-binding domain of tRNA CPQ91_16200 PF13603 Leucyl-tRNA synthetase, Domain 2 CPQ91_16200 PF09334 tRNA synthetases class I (M) CPQ91_16205 PF14074 Protein of unknown function (DUF4257) CPQ91_16210 PF07690 Major Facilitator Superfamily CPQ91_16215 PF03180 NLPA lipoprotein CPQ91_16220 PF04791 LMBR1-like membrane protein CPQ91_16225 PF02687 FtsX-like permease family CPQ91_16225 PF12704 MacB-like periplasmic core domain CPQ91_16230 PF00005 ABC transporter CPQ91_16240 PF00005 ABC transporter CPQ91_16245 PF00392 Bacterial regulatory proteins, gntR family CPQ91_16250 PF10732 Protein of unknown function (DUF2524) CPQ91_16255 PF04055 Radical SAM superfamily CPQ91_16255 PF16199 Radical_SAM C-terminal domain CPQ91_16260 PF06962 Putative rRNA methylase CPQ91_16265 PF00375 Sodium:dicarboxylate symporter family CPQ91_16270 PF10776 Protein of unknown function (DUF2600) CPQ91_16275 PF12146 Serine aminopeptidase, S33 CPQ91_16280 PF00132 Bacterial transferase hexapeptide (six repeats) CPQ91_16285 PF01569 PAP2 superfamily CPQ91_16290 PF00534 Glycosyl transferases group 1 CPQ91_16290 PF13439 Glycosyltransferase Family 4 CPQ91_16295 PF00733 Asparagine synthase CPQ91_16295 PF13537 Glutamine amidotransferase domain CPQ91_16300 PF02772 S-adenosylmethionine synthetase, central domain CPQ91_16300 PF00438 S-adenosylmethionine synthetase, N-terminal domain CPQ91_16300 PF02773 S-adenosylmethionine synthetase, C-terminal domain CPQ91_16305 PF01293 Phosphoenolpyruvate carboxykinase CPQ91_16310 PF00375 Sodium:dicarboxylate symporter family CPQ91_16315 PF10763 Protein of unknown function (DUF2584) CPQ91_16320 PF00326 Prolyl oligopeptidase family CPQ91_16330 PF00005 ABC transporter CPQ91_16335 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_16340 PF00293 NUDIX domain CPQ91_16350 PF05105 Bacteriophage holin family CPQ91_16355 PF00210 Ferritin-like domain CPQ91_16365 PF13115 YtkA-like CPQ91_16370 PF02664 S-Ribosylhomocysteinase (LuxS) CPQ91_16375 PF01809 Putative membrane protein insertion efficiency factor CPQ91_16380 PF00484 Carbonic anhydrase CPQ91_16385 PF02492 CobW/HypB/UreG, nucleotide-binding domain CPQ91_16385 PF07683 Cobalamin synthesis protein cobW C-terminal domain CPQ91_16390 PF01297 Zinc-uptake complex component A periplasmic CPQ91_16395 PF01197 Ribosomal protein L31 CPQ91_16400 PF01654 Cytochrome bd terminal oxidase subunit I CPQ91_16405 PF02322 Cytochrome bd terminal oxidase subunit II CPQ91_16410 PF07561 Domain of Unknown Function (DUF1540) CPQ91_16420 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CPQ91_16420 PF13378 Enolase C-terminal domain-like CPQ91_16425 PF13193 AMP-binding enzyme C-terminal domain CPQ91_16425 PF00501 AMP-binding enzyme CPQ91_16430 PF00378 Enoyl-CoA hydratase/isomerase CPQ91_16435 PF00561 alpha/beta hydrolase fold CPQ91_16440 PF16582 Middle domain of thiamine pyrophosphate CPQ91_16440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CPQ91_16440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPQ91_16445 PF00425 chorismate binding enzyme CPQ91_16450 PF01040 UbiA prenyltransferase family CPQ91_16455 PF01258 Prokaryotic dksA/traR C4-type zinc finger CPQ91_16465 PF08323 Starch synthase catalytic domain CPQ91_16465 PF00534 Glycosyl transferases group 1 CPQ91_16470 PF00483 Nucleotidyl transferase CPQ91_16480 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CPQ91_16480 PF02806 Alpha amylase, C-terminal all-beta domain CPQ91_16480 PF00128 Alpha amylase, catalytic domain CPQ91_16605 PF00392 Bacterial regulatory proteins, gntR family CPQ91_16610 PF09515 Thiamine transporter protein (Thia_YuaJ) CPQ91_16615 PF04203 Sortase domain CPQ91_16630 PF18801 response regulator aspartate phosphatase H, N terminal CPQ91_16635 PF01470 Pyroglutamyl peptidase CPQ91_16640 PF02080 TrkA-C domain CPQ91_16640 PF02254 TrkA-N domain CPQ91_16645 PF02386 Cation transport protein CPQ91_16655 PF12867 DinB superfamily CPQ91_16665 PF00465 Iron-containing alcohol dehydrogenase CPQ91_16685 PF04072 Leucine carboxyl methyltransferase CPQ91_16690 PF00842 Alanine racemase, C-terminal domain CPQ91_16690 PF01168 Alanine racemase, N-terminal domain CPQ91_16695 PF00190 Cupin CPQ91_16725 PF03747 ADP-ribosylglycohydrolase CPQ91_16760 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) CPQ91_16770 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CPQ91_16780 PF00149 Calcineurin-like phosphoesterase CPQ91_16785 PF02673 Bacitracin resistance protein BacA CPQ91_16790 PF01594 AI-2E family transporter CPQ91_16795 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CPQ91_16795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CPQ91_16805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPQ91_16805 PF02743 Cache domain CPQ91_16805 PF00672 HAMP domain CPQ91_16810 PF00672 HAMP domain CPQ91_16810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPQ91_16810 PF02743 Cache domain CPQ91_16815 PF02743 Cache domain CPQ91_16815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPQ91_16815 PF00672 HAMP domain CPQ91_16825 PF03060 Nitronate monooxygenase CPQ91_16830 PF01894 Uncharacterised protein family UPF0047 CPQ91_16835 PF16657 Maltogenic Amylase, C-terminal domain CPQ91_16835 PF00128 Alpha amylase, catalytic domain CPQ91_16850 PF01670 Glycosyl hydrolase family 12 CPQ91_16855 PF03471 Transporter associated domain CPQ91_16855 PF00571 CBS domain CPQ91_16855 PF01595 Cyclin M transmembrane N-terminal domain CPQ91_16860 PF04298 Putative neutral zinc metallopeptidase CPQ91_16870 PF11458 Membrane-integrating protein Mistic CPQ91_16875 PF07885 Ion channel CPQ91_16875 PF02254 TrkA-N domain CPQ91_16880 PF08868 YugN-like family CPQ91_16890 PF03073 TspO/MBR family CPQ91_16895 PF13302 Acetyltransferase (GNAT) domain CPQ91_16905 PF08863 YolD-like protein CPQ91_16925 PF01471 Putative peptidoglycan binding domain CPQ91_16925 PF01510 N-acetylmuramoyl-L-alanine amidase CPQ91_16930 PF04688 SPP1 phage holin CPQ91_16935 PF10779 Haemolysin XhlA CPQ91_16960 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CPQ91_16960 PF13457 GW (Gly-Tryp) dipeptide domain CPQ91_17025 PF03354 Phage Terminase CPQ91_17050 PF11122 Inner spore coat protein D CPQ91_17150 PF14659 Phage integrase, N-terminal SAM-like domain CPQ91_17150 PF00589 Phage integrase family CPQ91_17155 PF00342 Phosphoglucose isomerase CPQ91_17160 PF00465 Iron-containing alcohol dehydrogenase CPQ91_17165 PF04070 Domain of unknown function (DUF378) CPQ91_17170 PF00575 S1 RNA binding domain CPQ91_17175 PF00155 Aminotransferase class I and II CPQ91_17180 PF01037 Lrp/AsnC ligand binding domain CPQ91_17190 PF08958 Domain of unknown function (DUF1871) CPQ91_17200 PF00155 Aminotransferase class I and II CPQ91_17210 PF08810 Kinase associated protein B CPQ91_17215 PF00929 Exonuclease CPQ91_17220 PF07690 Major Facilitator Superfamily CPQ91_17225 PF00912 Transglycosylase CPQ91_17225 PF00905 Penicillin binding protein transpeptidase domain CPQ91_17230 PF04134 Protein of unknown function, DUF393 CPQ91_17235 PF17328 Family of unknown function (DUF5366) CPQ91_17240 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CPQ91_17240 PF17203 Single cache domain 3 CPQ91_17240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_17240 PF00989 PAS fold CPQ91_17245 PF00072 Response regulator receiver domain CPQ91_17255 PF01066 CDP-alcohol phosphatidyltransferase CPQ91_17260 PF09335 SNARE associated Golgi protein CPQ91_17265 PF02666 Phosphatidylserine decarboxylase CPQ91_17270 PF03390 2-hydroxycarboxylate transporter family CPQ91_17280 PF00361 Proton-conducting membrane transporter CPQ91_17280 PF13244 Domain of unknown function (DUF4040) CPQ91_17280 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CPQ91_17285 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CPQ91_17290 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CPQ91_17295 PF00361 Proton-conducting membrane transporter CPQ91_17300 PF01899 Na+/H+ ion antiporter subunit CPQ91_17305 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CPQ91_17310 PF03334 Na+/H+ antiporter subunit CPQ91_17315 PF03061 Thioesterase superfamily CPQ91_17320 PF00196 Bacterial regulatory proteins, luxR family CPQ91_17320 PF00072 Response regulator receiver domain CPQ91_17325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_17325 PF07730 Histidine kinase CPQ91_17340 PF08181 DegQ (SacQ) family CPQ91_17355 PF00563 EAL domain CPQ91_17355 PF08668 HDOD domain CPQ91_17360 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CPQ91_17360 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CPQ91_17360 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CPQ91_17365 PF00857 Isochorismatase family CPQ91_17370 PF07997 Protein of unknown function (DUF1694) CPQ91_17375 PF14166 YueH-like protein CPQ91_17385 PF01594 AI-2E family transporter CPQ91_17390 PF02082 Transcriptional regulator CPQ91_17395 PF07859 alpha/beta hydrolase fold CPQ91_17395 PF00331 Glycosyl hydrolase family 10 CPQ91_17405 PF01966 HD domain CPQ91_17410 PF00106 short chain dehydrogenase CPQ91_17415 PF17355 Family of unknown function (DUF5383) CPQ91_17425 PF12538 DNA transporter CPQ91_17425 PF01580 FtsK/SpoIIIE family CPQ91_17430 PF10140 WXG100 protein secretion system (Wss), protein YukC CPQ91_17435 PF08817 WXG100 protein secretion system (Wss), protein YukD CPQ91_17440 PF06013 Proteins of 100 residues with WXG CPQ91_17445 PF01235 Sodium:alanine symporter family CPQ91_17450 PF17853 GGDEF-like domain CPQ91_17450 PF06018 CodY GAF-like domain CPQ91_17450 PF13556 PucR C-terminal helix-turn-helix domain CPQ91_17455 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CPQ91_17455 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CPQ91_17465 PF00174 Oxidoreductase molybdopterin binding domain CPQ91_17470 PF02632 BioY family CPQ91_17475 PF03553 Na+/H+ antiporter family CPQ91_17475 PF13726 Na+-H+ antiporter family CPQ91_17480 PF00883 Cytosol aminopeptidase family, catalytic domain CPQ91_17480 PF02789 Cytosol aminopeptidase family, N-terminal domain CPQ91_17485 PF02681 Divergent PAP2 family CPQ91_17490 PF06725 3D domain CPQ91_17495 PF14068 Putative membrane protein CPQ91_17500 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPQ91_17505 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPQ91_17515 PF14169 Cold-inducible protein YdjO CPQ91_17520 PF00583 Acetyltransferase (GNAT) family CPQ91_17525 PF01521 Iron-sulphur cluster biosynthesis CPQ91_17530 PF01678 Diaminopimelate epimerase CPQ91_17535 PF07662 Na+ dependent nucleoside transporter C-terminus CPQ91_17535 PF01773 Na+ dependent nucleoside transporter N-terminus CPQ91_17540 PF07293 Protein of unknown function (DUF1450) CPQ91_17545 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPQ91_17550 PF08818 Domain of unknown function (DU1801) CPQ91_17560 PF18801 response regulator aspartate phosphatase H, N terminal CPQ91_17565 PF05870 Phenolic acid decarboxylase (PAD) CPQ91_17575 PF07315 Protein of unknown function (DUF1462) CPQ91_17580 PF01106 NifU-like domain CPQ91_17590 PF00326 Prolyl oligopeptidase family CPQ91_17590 PF07676 WD40-like Beta Propeller Repeat CPQ91_17595 PF00288 GHMP kinases N terminal domain CPQ91_17595 PF08544 GHMP kinases C terminal CPQ91_17600 PF00291 Pyridoxal-phosphate dependent enzyme CPQ91_17605 PF01842 ACT domain CPQ91_17605 PF00742 Homoserine dehydrogenase CPQ91_17605 PF03447 Homoserine dehydrogenase, NAD binding domain CPQ91_17610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPQ91_17610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPQ91_17620 PF04608 Phosphatidylglycerophosphatase A CPQ91_17625 PF13344 Haloacid dehalogenase-like hydrolase CPQ91_17630 PF01934 Protein of unknown function DUF86 CPQ91_17635 PF06265 Protein of unknown function (DUF1027) CPQ91_17640 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CPQ91_17645 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CPQ91_17645 PF04055 Radical SAM superfamily CPQ91_17650 PF01551 Peptidase family M23 CPQ91_17660 PF00209 Sodium:neurotransmitter symporter family CPQ91_17665 PF09560 Sporulation protein YunB (Spo_YunB) CPQ91_17670 PF08827 Domain of unknown function (DUF1805) CPQ91_17675 PF02872 5'-nucleotidase, C-terminal domain CPQ91_17680 PF01925 Sulfite exporter TauE/SafE CPQ91_17685 PF01904 Protein of unknown function DUF72 CPQ91_17695 PF00440 Bacterial regulatory proteins, tetR family CPQ91_17695 PF13977 BetI-type transcriptional repressor, C-terminal CPQ91_17705 PF00266 Aminotransferase class-V CPQ91_17710 PF01546 Peptidase family M20/M25/M40 CPQ91_17720 PF07690 Major Facilitator Superfamily CPQ91_17725 PF03606 C4-dicarboxylate anaerobic carrier CPQ91_17730 PF00591 Glycosyl transferase family, a/b domain CPQ91_17730 PF02885 Glycosyl transferase family, helical bundle domain CPQ91_17740 PF04231 Endonuclease I CPQ91_17750 PF01266 FAD dependent oxidoreductase CPQ91_17765 PF18801 response regulator aspartate phosphatase H, N terminal CPQ91_17770 PF01458 Uncharacterized protein family (UPF0051) CPQ91_17775 PF01592 NifU-like N terminal domain CPQ91_17780 PF00266 Aminotransferase class-V CPQ91_17785 PF01458 Uncharacterized protein family (UPF0051) CPQ91_17790 PF00005 ABC transporter CPQ91_17795 PF01545 Cation efflux family CPQ91_17795 PF16916 Dimerisation domain of Zinc Transporter CPQ91_17800 PF02627 Carboxymuconolactone decarboxylase family CPQ91_17805 PF03180 NLPA lipoprotein CPQ91_17810 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_17815 PF09383 NIL domain CPQ91_17815 PF00005 ABC transporter CPQ91_17820 PF02036 SCP-2 sterol transfer family CPQ91_17825 PF00085 Thioredoxin CPQ91_17830 PF01751 Toprim domain CPQ91_17835 PF10830 Protein of unknown function (DUF2553) CPQ91_17840 PF01597 Glycine cleavage H-protein CPQ91_17845 PF03960 ArsC family CPQ91_17850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPQ91_17850 PF02770 Acyl-CoA dehydrogenase, middle domain CPQ91_17850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CPQ91_17855 PF02803 Thiolase, C-terminal domain CPQ91_17855 PF00108 Thiolase, N-terminal domain CPQ91_17860 PF00378 Enoyl-CoA hydratase/isomerase CPQ91_17860 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CPQ91_17860 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CPQ91_17865 PF14115 YuzL-like protein CPQ91_17875 PF07875 Coat F domain CPQ91_17880 PF10835 Protein of unknown function (DUF2573) CPQ91_17890 PF00005 ABC transporter CPQ91_17895 PF01032 FecCD transport family CPQ91_17900 PF01032 FecCD transport family CPQ91_17905 PF01497 Periplasmic binding protein CPQ91_17910 PF14039 YusW-like protein CPQ91_17920 PF00768 D-alanyl-D-alanine carboxypeptidase CPQ91_17920 PF07943 Penicillin-binding protein 5, C-terminal domain CPQ91_17925 PF00106 short chain dehydrogenase CPQ91_17930 PF00210 Ferritin-like domain CPQ91_17935 PF13180 PDZ domain CPQ91_17940 PF00072 Response regulator receiver domain CPQ91_17940 PF00486 Transcriptional regulatory protein, C terminal CPQ91_17945 PF00512 His Kinase A (phospho-acceptor) domain CPQ91_17945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_17945 PF00672 HAMP domain CPQ91_17955 PF00440 Bacterial regulatory proteins, tetR family CPQ91_17960 PF10415 Fumarase C C-terminus CPQ91_17960 PF00206 Lyase CPQ91_17965 PF13113 Protein of unknown function (DUF3970) CPQ91_17970 PF03323 Bacillus/Clostridium GerA spore germination protein CPQ91_17975 PF03845 Spore germination protein CPQ91_17980 PF05504 Spore germination B3/ GerAC like, C-terminal CPQ91_17990 PF00072 Response regulator receiver domain CPQ91_17990 PF00196 Bacterial regulatory proteins, luxR family CPQ91_17995 PF00672 HAMP domain CPQ91_17995 PF07730 Histidine kinase CPQ91_17995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_18000 PF09922 Cell wall-active antibiotics response 4TMS YvqF CPQ91_18010 PF04012 PspA/IM30 family CPQ91_18020 PF01095 Pectinesterase CPQ91_18025 PF01923 Cobalamin adenosyltransferase CPQ91_18040 PF00465 Iron-containing alcohol dehydrogenase CPQ91_18045 PF00701 Dihydrodipicolinate synthetase family CPQ91_18050 PF00005 ABC transporter CPQ91_18055 PF01032 FecCD transport family CPQ91_18060 PF01497 Periplasmic binding protein CPQ91_18065 PF00392 Bacterial regulatory proteins, gntR family CPQ91_18065 PF07729 FCD domain CPQ91_18070 PF00106 short chain dehydrogenase CPQ91_18075 PF03475 3-alpha domain CPQ91_18075 PF03473 MOSC domain CPQ91_18080 PF03466 LysR substrate binding domain CPQ91_18080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPQ91_18085 PF00295 Glycosyl hydrolases family 28 CPQ91_18090 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CPQ91_18090 PF08666 SAF domain CPQ91_18095 PF08125 Mannitol dehydrogenase C-terminal domain CPQ91_18095 PF01232 Mannitol dehydrogenase Rossmann domain CPQ91_18100 PF00356 Bacterial regulatory proteins, lacI family CPQ91_18110 PF02614 Glucuronate isomerase CPQ91_18115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_18115 PF00512 His Kinase A (phospho-acceptor) domain CPQ91_18120 PF00486 Transcriptional regulatory protein, C terminal CPQ91_18120 PF00072 Response regulator receiver domain CPQ91_18125 PF00005 ABC transporter CPQ91_18130 PF01032 FecCD transport family CPQ91_18135 PF01032 FecCD transport family CPQ91_18140 PF13520 Amino acid permease CPQ91_18145 PF09575 Small spore protein J (Spore_SspJ) CPQ91_18150 PF04307 LexA-binding, inner membrane-associated putative hydrolase CPQ91_18155 PF00884 Sulfatase CPQ91_18160 PF07690 Major Facilitator Superfamily CPQ91_18165 PF00248 Aldo/keto reductase family CPQ91_18170 PF00480 ROK family CPQ91_18175 PF00266 Aminotransferase class-V CPQ91_18185 PF13538 UvrD-like helicase C-terminal domain CPQ91_18190 PF03458 UPF0126 domain CPQ91_18195 PF04229 GrpB protein CPQ91_18195 PF13673 Acetyltransferase (GNAT) domain CPQ91_18200 PF00583 Acetyltransferase (GNAT) family CPQ91_18200 PF13673 Acetyltransferase (GNAT) domain CPQ91_18205 PF02600 Disulfide bond formation protein DsbB CPQ91_18210 PF13462 Thioredoxin CPQ91_18215 PF00403 Heavy-metal-associated domain CPQ91_18220 PF13416 Bacterial extracellular solute-binding protein CPQ91_18225 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_18230 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_18235 PF01055 Glycosyl hydrolases family 31 CPQ91_18235 PF13802 Galactose mutarotase-like CPQ91_18240 PF07691 PA14 domain CPQ91_18240 PF01915 Glycosyl hydrolase family 3 C-terminal domain CPQ91_18240 PF00933 Glycosyl hydrolase family 3 N terminal domain CPQ91_18240 PF14310 Fibronectin type III-like domain CPQ91_18245 PF00005 ABC transporter CPQ91_18250 PF00950 ABC 3 transport family CPQ91_18255 PF01297 Zinc-uptake complex component A periplasmic CPQ91_18265 PF01418 Helix-turn-helix domain, rpiR family CPQ91_18265 PF01380 SIS domain CPQ91_18275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPQ91_18275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPQ91_18285 PF01116 Fructose-bisphosphate aldolase class-II CPQ91_18295 PF00403 Heavy-metal-associated domain CPQ91_18300 PF00403 Heavy-metal-associated domain CPQ91_18305 PF02583 Metal-sensitive transcriptional repressor CPQ91_18310 PF01965 DJ-1/PfpI family CPQ91_18315 PF00455 DeoR C terminal sensor domain CPQ91_18315 PF08220 DeoR-like helix-turn-helix domain CPQ91_18320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CPQ91_18320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CPQ91_18325 PF01261 Xylose isomerase-like TIM barrel CPQ91_18335 PF00596 Class II Aldolase and Adducin N-terminal domain CPQ91_18340 PF07690 Major Facilitator Superfamily CPQ91_18345 PF07690 Major Facilitator Superfamily CPQ91_18350 PF16715 Cyclodipeptide synthase CPQ91_18355 PF00067 Cytochrome P450 CPQ91_18365 PF01047 MarR family CPQ91_18375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CPQ91_18375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CPQ91_18380 PF02525 Flavodoxin-like fold CPQ91_18395 PF04545 Sigma-70, region 4 CPQ91_18400 PF12841 YvrJ protein family CPQ91_18405 PF00190 Cupin CPQ91_18410 PF14184 Regulatory protein YrvL CPQ91_18425 PF14317 YcxB-like protein CPQ91_18435 PF04740 LXG domain of WXG superfamily CPQ91_18435 PF14431 YwqJ-like deaminase CPQ91_18435 PF14449 Pre-toxin TG CPQ91_18455 PF01668 SmpB protein CPQ91_18460 PF00575 S1 RNA binding domain CPQ91_18460 PF08206 Ribonuclease B OB domain CPQ91_18460 PF17876 Cold shock domain CPQ91_18460 PF00773 RNB domain CPQ91_18465 PF12146 Serine aminopeptidase, S33 CPQ91_18470 PF03840 Preprotein translocase SecG subunit CPQ91_18475 PF18277 AbrB C-terminal domain CPQ91_18475 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CPQ91_18480 PF01381 Helix-turn-helix CPQ91_18495 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_18500 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CPQ91_18505 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_18510 PF00005 ABC transporter CPQ91_18510 PF00571 CBS domain CPQ91_18515 PF12802 MarR family CPQ91_18520 PF01914 MarC family integral membrane protein CPQ91_18535 PF13240 zinc-ribbon domain CPQ91_18540 PF01497 Periplasmic binding protein CPQ91_18555 PF01965 DJ-1/PfpI family CPQ91_18560 PF03952 Enolase, N-terminal domain CPQ91_18560 PF00113 Enolase, C-terminal TIM barrel domain CPQ91_18565 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CPQ91_18565 PF01676 Metalloenzyme superfamily CPQ91_18570 PF00121 Triosephosphate isomerase CPQ91_18575 PF00162 Phosphoglycerate kinase CPQ91_18580 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CPQ91_18580 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPQ91_18585 PF04198 Putative sugar-binding domain CPQ91_18590 PF00296 Luciferase-like monooxygenase CPQ91_18595 PF00324 Amino acid permease CPQ91_18605 PF00005 ABC transporter CPQ91_18615 PF02589 LUD domain CPQ91_18620 PF13183 4Fe-4S dicluster domain CPQ91_18620 PF11870 Domain of unknown function (DUF3390) CPQ91_18620 PF02589 LUD domain CPQ91_18625 PF02754 Cysteine-rich domain CPQ91_18630 PF00392 Bacterial regulatory proteins, gntR family CPQ91_18630 PF07729 FCD domain CPQ91_18635 PF02652 L-lactate permease CPQ91_18640 PF00309 Sigma-54 factor, Activator interacting domain (AID) CPQ91_18640 PF04963 Sigma-54 factor, core binding domain CPQ91_18640 PF04552 Sigma-54, DNA binding domain CPQ91_18645 PF09628 YvfG protein CPQ91_18650 PF04230 Polysaccharide pyruvyl transferase CPQ91_18655 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CPQ91_18660 PF17836 PglD N-terminal domain CPQ91_18660 PF00132 Bacterial transferase hexapeptide (six repeats) CPQ91_18665 PF02397 Bacterial sugar transferase CPQ91_18670 PF14667 Polysaccharide biosynthesis C-terminal domain CPQ91_18670 PF01943 Polysaccharide biosynthesis protein CPQ91_18675 PF00535 Glycosyl transferase family 2 CPQ91_18680 PF04230 Polysaccharide pyruvyl transferase CPQ91_18685 PF00535 Glycosyl transferase family 2 CPQ91_18695 PF13439 Glycosyltransferase Family 4 CPQ91_18695 PF00534 Glycosyl transferases group 1 CPQ91_18700 PF00535 Glycosyl transferase family 2 CPQ91_18705 PF00534 Glycosyl transferases group 1 CPQ91_18705 PF13439 Glycosyltransferase Family 4 CPQ91_18710 PF02719 Polysaccharide biosynthesis protein CPQ91_18715 PF13614 AAA domain CPQ91_18720 PF02706 Chain length determinant protein CPQ91_18725 PF01381 Helix-turn-helix CPQ91_18725 PF08671 Anti-repressor SinI CPQ91_18730 PF02525 Flavodoxin-like fold CPQ91_18740 PF07690 Major Facilitator Superfamily CPQ91_18745 PF01842 ACT domain CPQ91_18745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPQ91_18745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPQ91_18750 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CPQ91_18755 PF07005 Sugar-binding N-terminal domain CPQ91_18755 PF17042 Nucleotide-binding C-terminal domain CPQ91_18760 PF00465 Iron-containing alcohol dehydrogenase CPQ91_18765 PF00701 Dihydrodipicolinate synthetase family CPQ91_18770 PF00158 Sigma-54 interaction domain CPQ91_18770 PF00072 Response regulator receiver domain CPQ91_18770 PF02954 Bacterial regulatory protein, Fis family CPQ91_18775 PF01638 HxlR-like helix-turn-helix CPQ91_18780 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CPQ91_18785 PF02435 Levansucrase/Invertase CPQ91_18790 PF08244 Glycosyl hydrolases family 32 C terminal CPQ91_18790 PF00251 Glycosyl hydrolases family 32 N-terminal domain CPQ91_18805 PF00574 Clp protease CPQ91_18810 PF03641 Possible lysine decarboxylase CPQ91_18815 PF03819 MazG nucleotide pyrophosphohydrolase domain CPQ91_18820 PF01966 HD domain CPQ91_18825 PF00916 Sulfate permease family CPQ91_18825 PF01740 STAS domain CPQ91_18830 PF00484 Carbonic anhydrase CPQ91_18835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPQ91_18835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPQ91_18840 PF01613 Flavin reductase like domain CPQ91_18850 PF00545 ribonuclease CPQ91_18855 PF01337 Barstar (barnase inhibitor) CPQ91_18860 PF00797 N-acetyltransferase CPQ91_18865 PF00381 PTS HPr component phosphorylation site CPQ91_18870 PF14527 WhiA LAGLIDADG-like domain CPQ91_18870 PF02650 WhiA C-terminal HTH domain CPQ91_18870 PF10298 WhiA N-terminal LAGLIDADG-like domain CPQ91_18875 PF01933 Uncharacterised protein family UPF0052 CPQ91_18880 PF03668 P-loop ATPase protein family CPQ91_18885 PF00293 NUDIX domain CPQ91_18895 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPQ91_18910 PF01502 Phosphoribosyl-AMP cyclohydrolase CPQ91_18910 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CPQ91_18915 PF00977 Histidine biosynthesis protein CPQ91_18920 PF00977 Histidine biosynthesis protein CPQ91_18925 PF00117 Glutamine amidotransferase class-I CPQ91_18930 PF00475 Imidazoleglycerol-phosphate dehydratase CPQ91_18935 PF00815 Histidinol dehydrogenase CPQ91_18940 PF01634 ATP phosphoribosyltransferase CPQ91_18945 PF13393 Histidyl-tRNA synthetase CPQ91_18950 PF13529 Peptidase_C39 like family CPQ91_18955 PF03211 Pectate lyase CPQ91_18960 PF14602 Hexapeptide repeat of succinyl-transferase CPQ91_18965 PF13419 Haloacid dehalogenase-like hydrolase CPQ91_18970 PF07670 Nucleoside recognition CPQ91_18975 PF01790 Prolipoprotein diacylglyceryl transferase CPQ91_18980 PF07475 HPr Serine kinase C-terminal domain CPQ91_18980 PF02603 HPr Serine kinase N terminus CPQ91_18985 PF01047 MarR family CPQ91_18990 PF07690 Major Facilitator Superfamily CPQ91_18995 PF00149 Calcineurin-like phosphoesterase CPQ91_19000 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CPQ91_19005 PF04024 PspC domain CPQ91_19010 PF13349 Putative adhesin CPQ91_19025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPQ91_19035 PF17755 UvrA DNA-binding domain CPQ91_19035 PF17760 UvrA interaction domain CPQ91_19035 PF00005 ABC transporter CPQ91_19040 PF00271 Helicase conserved C-terminal domain CPQ91_19040 PF04851 Type III restriction enzyme, res subunit CPQ91_19040 PF02151 UvrB/uvrC motif CPQ91_19040 PF17757 UvrB interaction domain CPQ91_19040 PF12344 Ultra-violet resistance protein B CPQ91_19045 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) CPQ91_19055 PF17820 PDZ domain CPQ91_19060 PF17423 Swarming motility protein CPQ91_19065 PF03572 Peptidase family S41 CPQ91_19065 PF01471 Putative peptidoglycan binding domain CPQ91_19065 PF17820 PDZ domain CPQ91_19070 PF00180 Isocitrate/isopropylmalate dehydrogenase CPQ91_19075 PF00877 NlpC/P60 family CPQ91_19080 PF02687 FtsX-like permease family CPQ91_19080 PF18075 FtsX extracellular domain CPQ91_19085 PF00005 ABC transporter CPQ91_19095 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CPQ91_19100 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CPQ91_19100 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CPQ91_19110 PF07516 SecA Wing and Scaffold domain CPQ91_19110 PF02810 SEC-C motif CPQ91_19110 PF01043 SecA preprotein cross-linking domain CPQ91_19110 PF07517 SecA DEAD-like domain CPQ91_19115 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CPQ91_19115 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CPQ91_19130 PF02561 Flagellar protein FliS CPQ91_19135 PF07195 Flagellar hook-associated protein 2 C-terminus CPQ91_19135 PF07196 Flagellin hook IN motif CPQ91_19135 PF02465 Flagellar hook-associated protein 2 N-terminus CPQ91_19140 PF03646 FlaG protein CPQ91_19150 PF00700 Bacterial flagellin C-terminal helical region CPQ91_19150 PF00669 Bacterial flagellin N-terminal helical region CPQ91_19155 PF02599 Global regulator protein family CPQ91_19160 PF02623 FliW protein CPQ91_19170 PF00669 Bacterial flagellin N-terminal helical region CPQ91_19170 PF00700 Bacterial flagellin C-terminal helical region CPQ91_19175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPQ91_19175 PF00460 Flagella basal body rod protein CPQ91_19180 PF05130 FlgN protein CPQ91_19185 PF04316 Anti-sigma-28 factor, FlgM CPQ91_19200 PF10719 Late competence development protein ComFB CPQ91_19205 PF04851 Type III restriction enzyme, res subunit CPQ91_19205 PF00271 Helicase conserved C-terminal domain CPQ91_19210 PF02645 Uncharacterised protein, DegV family COG1307 CPQ91_19215 PF00072 Response regulator receiver domain CPQ91_19215 PF00196 Bacterial regulatory proteins, luxR family CPQ91_19220 PF07730 Histidine kinase CPQ91_19220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_19220 PF05384 Sensor protein DegS CPQ91_19225 PF09186 Domain of unknown function (DUF1949) CPQ91_19225 PF01205 Uncharacterized protein family UPF0029 CPQ91_19230 PF03816 Cell envelope-related transcriptional attenuator domain CPQ91_19240 PF00953 Glycosyl transferase family 4 CPQ91_19250 PF00535 Glycosyl transferase family 2 CPQ91_19255 PF02706 Chain length determinant protein CPQ91_19260 PF04932 O-Antigen ligase CPQ91_19265 PF16363 GDP-mannose 4,6 dehydratase CPQ91_19270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CPQ91_19270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CPQ91_19270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CPQ91_19275 PF00534 Glycosyl transferases group 1 CPQ91_19275 PF13439 Glycosyltransferase Family 4 CPQ91_19280 PF01943 Polysaccharide biosynthesis protein CPQ91_19280 PF14667 Polysaccharide biosynthesis C-terminal domain CPQ91_19285 PF02397 Bacterial sugar transferase CPQ91_19290 PF04122 Putative cell wall binding repeat 2 CPQ91_19290 PF01520 N-acetylmuramoyl-L-alanine amidase CPQ91_19295 PF08486 Stage II sporulation protein CPQ91_19295 PF04122 Putative cell wall binding repeat 2 CPQ91_19305 PF03816 Cell envelope-related transcriptional attenuator domain CPQ91_19315 PF02350 UDP-N-acetylglucosamine 2-epimerase CPQ91_19320 PF00483 Nucleotidyl transferase CPQ91_19325 PF00005 ABC transporter CPQ91_19330 PF01061 ABC-2 type transporter CPQ91_19345 PF00535 Glycosyl transferase family 2 CPQ91_19345 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CPQ91_19350 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CPQ91_19355 PF01467 Cytidylyltransferase-like CPQ91_19360 PF03808 Glycosyl transferase WecB/TagA/CpsF family CPQ91_19365 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CPQ91_19370 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CPQ91_19370 PF08239 Bacterial SH3 domain CPQ91_19370 PF05036 Sporulation related domain CPQ91_19375 PF01238 Phosphomannose isomerase type I CPQ91_19380 PF04055 Radical SAM superfamily CPQ91_19385 PF13597 Anaerobic ribonucleoside-triphosphate reductase CPQ91_19385 PF03477 ATP cone domain CPQ91_19390 PF03812 2-keto-3-deoxygluconate permease CPQ91_19395 PF01081 KDPG and KHG aldolase CPQ91_19400 PF00294 pfkB family carbohydrate kinase CPQ91_19405 PF00356 Bacterial regulatory proteins, lacI family CPQ91_19410 PF04962 KduI/IolB family CPQ91_19420 PF00107 Zinc-binding dehydrogenase CPQ91_19420 PF08240 Alcohol dehydrogenase GroES-like domain CPQ91_19420 PF13823 Alcohol dehydrogenase GroES-associated CPQ91_19425 PF00083 Sugar (and other) transporter CPQ91_19430 PF03816 Cell envelope-related transcriptional attenuator domain CPQ91_19440 PF00877 NlpC/P60 family CPQ91_19450 PF09587 Bacterial capsule synthesis protein PGA_cap CPQ91_19455 PF14102 Capsule biosynthesis CapC CPQ91_19460 PF08245 Mur ligase middle domain CPQ91_19465 PF00356 Bacterial regulatory proteins, lacI family CPQ91_19470 PF00294 pfkB family carbohydrate kinase CPQ91_19475 PF05025 RbsD / FucU transport protein family CPQ91_19480 PF00005 ABC transporter CPQ91_19485 PF02653 Branched-chain amino acid transport system / permease component CPQ91_19490 PF13407 Periplasmic binding protein domain CPQ91_19500 PF03306 Alpha-acetolactate decarboxylase CPQ91_19505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPQ91_19505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CPQ91_19505 PF00205 Thiamine pyrophosphate enzyme, central domain CPQ91_19510 PF03466 LysR substrate binding domain CPQ91_19510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPQ91_19520 PF01037 Lrp/AsnC ligand binding domain CPQ91_19520 PF13404 AsnC-type helix-turn-helix domain CPQ91_19525 PF02417 Chromate transporter CPQ91_19530 PF02417 Chromate transporter CPQ91_19540 PF02706 Chain length determinant protein CPQ91_19540 PF13807 G-rich domain on putative tyrosine kinase CPQ91_19550 PF04434 SWIM zinc finger CPQ91_19555 PF12419 SNF2 Helicase protein CPQ91_19555 PF00271 Helicase conserved C-terminal domain CPQ91_19555 PF00176 SNF2 family N-terminal domain CPQ91_19565 PF00455 DeoR C terminal sensor domain CPQ91_19565 PF08220 DeoR-like helix-turn-helix domain CPQ91_19570 PF00923 Transaldolase/Fructose-6-phosphate aldolase CPQ91_19575 PF00106 short chain dehydrogenase CPQ91_19580 PF03829 PTS system glucitol/sorbitol-specific IIA component CPQ91_19585 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CPQ91_19585 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CPQ91_19590 PF03608 PTS system enzyme II sorbitol-specific factor CPQ91_19600 PF04198 Putative sugar-binding domain CPQ91_19600 PF13936 Helix-turn-helix domain CPQ91_19605 PF00436 Single-strand binding protein family CPQ91_19615 PF14183 YwpF-like protein CPQ91_19620 PF01741 Large-conductance mechanosensitive channel, MscL CPQ91_19625 PF07977 FabA-like domain CPQ91_19630 PF00460 Flagella basal body rod protein CPQ91_19630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPQ91_19635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPQ91_19635 PF00460 Flagella basal body rod protein CPQ91_19645 PF12116 Stage III sporulation protein D CPQ91_19655 PF01047 MarR family CPQ91_19660 PF07690 Major Facilitator Superfamily CPQ91_19665 PF01569 PAP2 superfamily CPQ91_19670 PF02833 DHHA2 domain CPQ91_19670 PF01368 DHH family CPQ91_19685 PF05067 Manganese containing catalase CPQ91_19690 PF09844 Uncharacterized conserved protein (COG2071) CPQ91_19695 PF00571 CBS domain CPQ91_19700 PF01544 CorA-like Mg2+ transporter protein CPQ91_19705 PF01595 Cyclin M transmembrane N-terminal domain CPQ91_19705 PF00571 CBS domain CPQ91_19705 PF03471 Transporter associated domain CPQ91_19710 PF00909 Ammonium Transporter Family CPQ91_19715 PF00543 Nitrogen regulatory protein P-II CPQ91_19720 PF00574 Clp protease CPQ91_19725 PF08281 Sigma-70, region 4 CPQ91_19725 PF12680 SnoaL-like domain CPQ91_19725 PF04542 Sigma-70 region 2 CPQ91_19730 PF01551 Peptidase family M23 CPQ91_19735 PF00583 Acetyltransferase (GNAT) family CPQ91_19740 PF17370 Family of unknown function (DUF5392) CPQ91_19745 PF13091 PLD-like domain CPQ91_19745 PF13396 Phospholipase_D-nuclease N-terminal CPQ91_19755 PF07690 Major Facilitator Superfamily CPQ91_19765 PF00501 AMP-binding enzyme CPQ91_19765 PF00668 Condensation domain CPQ91_19765 PF00550 Phosphopantetheine attachment site CPQ91_19765 PF00975 Thioesterase domain CPQ91_19765 PF13193 AMP-binding enzyme C-terminal domain CPQ91_19770 PF00857 Isochorismatase family CPQ91_19770 PF00550 Phosphopantetheine attachment site CPQ91_19775 PF13193 AMP-binding enzyme C-terminal domain CPQ91_19775 PF00501 AMP-binding enzyme CPQ91_19780 PF00425 chorismate binding enzyme CPQ91_19785 PF00106 short chain dehydrogenase CPQ91_19790 PF00756 Putative esterase CPQ91_19795 PF01032 FecCD transport family CPQ91_19800 PF01032 FecCD transport family CPQ91_19805 PF01497 Periplasmic binding protein CPQ91_19810 PF01497 Periplasmic binding protein CPQ91_19810 PF12833 Helix-turn-helix domain CPQ91_19815 PF17319 Family of unknown function (DUF5362) CPQ91_19820 PF13460 NAD(P)H-binding CPQ91_19825 PF02082 Transcriptional regulator CPQ91_19835 PF04055 Radical SAM superfamily CPQ91_19835 PF06463 Molybdenum Cofactor Synthesis C CPQ91_19840 PF02634 FdhD/NarQ family CPQ91_19845 PF07690 Major Facilitator Superfamily CPQ91_19850 PF01568 Molydopterin dinucleotide binding domain CPQ91_19850 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CPQ91_19850 PF00384 Molybdopterin oxidoreductase CPQ91_19850 PF12838 4Fe-4S dicluster domain CPQ91_19850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPQ91_19855 PF00092 von Willebrand factor type A domain CPQ91_19860 PF00092 von Willebrand factor type A domain CPQ91_19865 PF08486 Stage II sporulation protein CPQ91_19875 PF08680 TATA-box binding CPQ91_19880 PF06612 Protein of unknown function (DUF1146) CPQ91_19885 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CPQ91_19885 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CPQ91_19890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPQ91_19890 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPQ91_19895 PF00231 ATP synthase CPQ91_19900 PF00306 ATP synthase alpha/beta chain, C terminal domain CPQ91_19900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPQ91_19900 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPQ91_19905 PF00213 ATP synthase delta (OSCP) subunit CPQ91_19910 PF00430 ATP synthase B/B' CF(0) CPQ91_19915 PF00137 ATP synthase subunit C CPQ91_19920 PF00119 ATP synthase A chain CPQ91_19925 PF03899 ATP synthase I chain CPQ91_19940 PF00464 Serine hydroxymethyltransferase CPQ91_19945 PF04260 Protein of unknown function (DUF436) CPQ91_19950 PF02502 Ribose/Galactose Isomerase CPQ91_19955 PF01451 Low molecular weight phosphotyrosine protein phosphatase CPQ91_19960 PF02659 Putative manganese efflux pump CPQ91_19965 PF03481 Putative GTP-binding controlling metal-binding CPQ91_19965 PF01300 Telomere recombination CPQ91_19975 PF09551 Stage II sporulation protein R (spore_II_R) CPQ91_19980 PF07690 Major Facilitator Superfamily CPQ91_19985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CPQ91_19985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CPQ91_19990 PF05116 Sucrose-6F-phosphate phosphohydrolase CPQ91_19995 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CPQ91_20000 PF00356 Bacterial regulatory proteins, lacI family CPQ91_20005 PF17827 PrmC N-terminal domain CPQ91_20005 PF05175 Methyltransferase small domain CPQ91_20010 PF00472 RF-1 domain CPQ91_20010 PF03462 PCRF domain CPQ91_20015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPQ91_20020 PF13411 MerR HTH family regulatory protein CPQ91_20025 PF03547 Membrane transport protein CPQ91_20030 PF00390 Malic enzyme, N-terminal domain CPQ91_20030 PF03949 Malic enzyme, NAD binding domain CPQ91_20035 PF00265 Thymidine kinase CPQ91_20040 PF01197 Ribosomal protein L31 CPQ91_20045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPQ91_20045 PF07498 Rho termination factor, N-terminal domain CPQ91_20045 PF07497 Rho termination factor, RNA-binding domain CPQ91_20050 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CPQ91_20055 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPQ91_20060 PF00923 Transaldolase/Fructose-6-phosphate aldolase CPQ91_20065 PF01116 Fructose-bisphosphate aldolase class-II CPQ91_20070 PF00072 Response regulator receiver domain CPQ91_20075 PF10740 Domain of unknown function (DUF2529) CPQ91_20080 PF00117 Glutamine amidotransferase class-I CPQ91_20080 PF06418 CTP synthase N-terminus CPQ91_20085 PF05066 HB1, ASXL, restriction endonuclease HTH domain CPQ91_20090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPQ91_20090 PF02770 Acyl-CoA dehydrogenase, middle domain CPQ91_20090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CPQ91_20095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPQ91_20095 PF02770 Acyl-CoA dehydrogenase, middle domain CPQ91_20095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CPQ91_20100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CPQ91_20100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CPQ91_20105 PF02803 Thiolase, C-terminal domain CPQ91_20105 PF00108 Thiolase, N-terminal domain CPQ91_20110 PF02754 Cysteine-rich domain CPQ91_20110 PF13183 4Fe-4S dicluster domain CPQ91_20115 PF13091 PLD-like domain CPQ91_20125 PF05746 DALR anticodon binding domain CPQ91_20125 PF00750 tRNA synthetases class I (R) CPQ91_20125 PF03485 Arginyl tRNA synthetase N terminal domain CPQ91_20130 PF09148 Domain of unknown function (DUF1934) CPQ91_20135 PF00491 Arginase family CPQ91_20140 PF17284 Spermidine synthase tetramerisation domain CPQ91_20155 PF00905 Penicillin binding protein transpeptidase domain CPQ91_20155 PF00912 Transglycosylase CPQ91_20160 PF08741 YwhD family CPQ91_20165 PF02163 Peptidase family M50 CPQ91_20170 PF01361 Tautomerase enzyme CPQ91_20185 PF01966 HD domain CPQ91_20190 PF07293 Protein of unknown function (DUF1450) CPQ91_20200 PF14154 Domain of unknown function (DUF4306) CPQ91_20205 PF03099 Biotin/lipoate A/B protein ligase family CPQ91_20210 PF01494 FAD binding domain CPQ91_20215 PF07690 Major Facilitator Superfamily CPQ91_20225 PF01361 Tautomerase enzyme CPQ91_20235 PF00171 Aldehyde dehydrogenase family CPQ91_20240 PF01614 Bacterial transcriptional regulator CPQ91_20240 PF09339 IclR helix-turn-helix domain CPQ91_20250 PF01515 Phosphate acetyl/butaryl transferase CPQ91_20260 PF17735 Biofilm surface layer A CPQ91_20270 PF02386 Cation transport protein CPQ91_20275 PF09671 Spore coat protein (Spore_GerQ) CPQ91_20290 PF00005 ABC transporter CPQ91_20300 PF00072 Response regulator receiver domain CPQ91_20300 PF00196 Bacterial regulatory proteins, luxR family CPQ91_20305 PF04241 Protein of unknown function (DUF423) CPQ91_20310 PF00860 Permease family CPQ91_20315 PF17261 Family of unknown function (DUF5327) CPQ91_20320 PF00171 Aldehyde dehydrogenase family CPQ91_20325 PF03167 Uracil DNA glycosylase superfamily CPQ91_20330 PF00535 Glycosyl transferase family 2 CPQ91_20335 PF08543 Phosphomethylpyrimidine kinase CPQ91_20345 PF00251 Glycosyl hydrolases family 32 N-terminal domain CPQ91_20345 PF08244 Glycosyl hydrolases family 32 C terminal CPQ91_20350 PF00367 phosphotransferase system, EIIB CPQ91_20350 PF02378 Phosphotransferase system, EIIC CPQ91_20355 PF03123 CAT RNA binding domain CPQ91_20355 PF00874 PRD domain CPQ91_20365 PF13860 FlgD Ig-like domain CPQ91_20365 PF05922 Peptidase inhibitor I9 CPQ91_20365 PF02225 PA domain CPQ91_20365 PF00082 Subtilase family CPQ91_20375 PF00296 Luciferase-like monooxygenase CPQ91_20380 PF00881 Nitroreductase family CPQ91_20385 PF01546 Peptidase family M20/M25/M40 CPQ91_20385 PF07687 Peptidase dimerisation domain CPQ91_20390 PF01098 Cell cycle protein CPQ91_20395 PF01098 Cell cycle protein CPQ91_20410 PF17368 Spore morphogenesis and germination YwcE CPQ91_20420 PF00583 Acetyltransferase (GNAT) family CPQ91_20425 PF00005 ABC transporter CPQ91_20430 PF00005 ABC transporter CPQ91_20450 PF00196 Bacterial regulatory proteins, luxR family CPQ91_20450 PF00072 Response regulator receiver domain CPQ91_20455 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CPQ91_20460 PF00510 Cytochrome c oxidase subunit III CPQ91_20465 PF00115 Cytochrome C and Quinol oxidase polypeptide I CPQ91_20470 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CPQ91_20470 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CPQ91_20475 PF16363 GDP-mannose 4,6 dehydratase CPQ91_20495 PF04341 Protein of unknown function, DUF485 CPQ91_20500 PF00474 Sodium:solute symporter family CPQ91_20505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CPQ91_20505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CPQ91_20510 PF01261 Xylose isomerase-like TIM barrel CPQ91_20515 PF00480 ROK family CPQ91_20520 PF02581 Thiamine monophosphate synthase CPQ91_20525 PF02110 Hydroxyethylthiazole kinase family CPQ91_20530 PF03466 LysR substrate binding domain CPQ91_20530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPQ91_20545 PF03788 LrgA family CPQ91_20550 PF04172 LrgB-like family CPQ91_20560 PF00474 Sodium:solute symporter family CPQ91_20565 PF10672 S-adenosylmethionine-dependent methyltransferase CPQ91_20565 PF17785 PUA-like domain CPQ91_20570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPQ91_20575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPQ91_20575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPQ91_20580 PF01501 Glycosyl transferase family 8 CPQ91_20595 PF07730 Histidine kinase CPQ91_20595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_20600 PF00072 Response regulator receiver domain CPQ91_20600 PF00196 Bacterial regulatory proteins, luxR family CPQ91_20605 PF03176 MMPL family CPQ91_20610 PF09529 Integral membrane protein (intg_mem_TP0381) CPQ91_20615 PF07690 Major Facilitator Superfamily CPQ91_20620 PF13378 Enolase C-terminal domain-like CPQ91_20620 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CPQ91_20625 PF01081 KDPG and KHG aldolase CPQ91_20630 PF00294 pfkB family carbohydrate kinase CPQ91_20635 PF09339 IclR helix-turn-helix domain CPQ91_20635 PF01614 Bacterial transcriptional regulator CPQ91_20640 PF04389 Peptidase family M28 CPQ91_20640 PF02225 PA domain CPQ91_20645 PF07690 Major Facilitator Superfamily CPQ91_20655 PF04607 Region found in RelA / SpoT proteins CPQ91_20665 PF12459 D-Ala-teichoic acid biosynthesis protein CPQ91_20670 PF13193 AMP-binding enzyme C-terminal domain CPQ91_20670 PF00501 AMP-binding enzyme CPQ91_20675 PF03062 MBOAT, membrane-bound O-acyltransferase family CPQ91_20680 PF00550 Phosphopantetheine attachment site CPQ91_20685 PF04914 DltD protein CPQ91_20690 PF01063 Amino-transferase class IV CPQ91_20695 PF07690 Major Facilitator Superfamily CPQ91_20700 PF11975 Family 4 glycosyl hydrolase C-terminal domain CPQ91_20700 PF02056 Family 4 glycosyl hydrolase CPQ91_20705 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CPQ91_20710 PF02378 Phosphotransferase system, EIIC CPQ91_20715 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPQ91_20725 PF02245 Methylpurine-DNA glycosylase (MPG) CPQ91_20730 PF07729 FCD domain CPQ91_20730 PF00392 Bacterial regulatory proteins, gntR family CPQ91_20735 PF00285 Citrate synthase, C-terminal domain CPQ91_20740 PF03972 MmgE/PrpD family CPQ91_20760 PF00005 ABC transporter CPQ91_20760 PF00664 ABC transporter transmembrane region CPQ91_20765 PF13472 GDSL-like Lipase/Acylhydrolase family CPQ91_20770 PF17735 Biofilm surface layer A CPQ91_20775 PF17735 Biofilm surface layer A CPQ91_20780 PF07690 Major Facilitator Superfamily CPQ91_20785 PF12679 ABC-2 family transporter protein CPQ91_20790 PF00005 ABC transporter CPQ91_20790 PF13732 Domain of unknown function (DUF4162) CPQ91_20795 PF13396 Phospholipase_D-nuclease N-terminal CPQ91_20810 PF08281 Sigma-70, region 4 CPQ91_20810 PF04542 Sigma-70 region 2 CPQ91_20815 PF07690 Major Facilitator Superfamily CPQ91_20820 PF06628 Catalase-related immune-responsive CPQ91_20820 PF00199 Catalase CPQ91_20825 PF06628 Catalase-related immune-responsive CPQ91_20825 PF00199 Catalase CPQ91_20830 PF01475 Ferric uptake regulator family CPQ91_20840 PF12679 ABC-2 family transporter protein CPQ91_20845 PF00005 ABC transporter CPQ91_20860 PF00005 ABC transporter CPQ91_20880 PF00082 Subtilase family CPQ91_20885 PF00664 ABC transporter transmembrane region CPQ91_20885 PF00005 ABC transporter CPQ91_20885 PF03412 Peptidase C39 family CPQ91_20895 PF16934 Two-component Enterococcus faecalis cytolysin (EFC) CPQ91_20900 PF14867 Lantibiotic alpha CPQ91_20910 PF00544 Pectate lyase CPQ91_20915 PF01256 Carbohydrate kinase CPQ91_20920 PF00664 ABC transporter transmembrane region CPQ91_20920 PF00005 ABC transporter CPQ91_20925 PF00664 ABC transporter transmembrane region CPQ91_20925 PF00005 ABC transporter CPQ91_20930 PF02322 Cytochrome bd terminal oxidase subunit II CPQ91_20935 PF01654 Cytochrome bd terminal oxidase subunit I CPQ91_20945 PF01226 Formate/nitrite transporter CPQ91_20955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPQ91_20955 PF00390 Malic enzyme, N-terminal domain CPQ91_20955 PF03949 Malic enzyme, NAD binding domain CPQ91_20960 PF03553 Na+/H+ antiporter family CPQ91_20965 PF10415 Fumarase C C-terminus CPQ91_20965 PF00206 Lyase CPQ91_20970 PF17763 Glutaminase/Asparaginase C-terminal domain CPQ91_20970 PF00710 Asparaginase, N-terminal CPQ91_20975 PF01381 Helix-turn-helix CPQ91_20980 PF10282 Lactonase, 7-bladed beta-propeller CPQ91_20990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_21000 PF00005 ABC transporter CPQ91_21005 PF02687 FtsX-like permease family CPQ91_21010 PF06486 Protein of unknown function (DUF1093) CPQ91_21020 PF01522 Polysaccharide deacetylase CPQ91_21030 PF07238 PilZ domain CPQ91_21030 PF00535 Glycosyl transferase family 2 CPQ91_21030 PF03552 Cellulose synthase CPQ91_21035 PF03390 2-hydroxycarboxylate transporter family CPQ91_21040 PF03009 Glycerophosphoryl diester phosphodiesterase family CPQ91_21045 PF05901 Excalibur calcium-binding domain CPQ91_21055 PF00884 Sulfatase CPQ91_21060 PF17353 Family of unknown function (DUF5381) CPQ91_21065 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CPQ91_21065 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CPQ91_21070 PF01316 Arginine repressor, DNA binding domain CPQ91_21070 PF02863 Arginine repressor, C-terminal domain CPQ91_21085 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPQ91_21085 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPQ91_21090 PF13520 Amino acid permease CPQ91_21095 PF00696 Amino acid kinase family CPQ91_21105 PF00232 Glycosyl hydrolase family 1 CPQ91_21110 PF02378 Phosphotransferase system, EIIC CPQ91_21120 PF08281 Sigma-70, region 4 CPQ91_21120 PF04542 Sigma-70 region 2 CPQ91_21125 PF04055 Radical SAM superfamily CPQ91_21145 PF06480 FtsH Extracellular CPQ91_21145 PF01434 Peptidase family M41 CPQ91_21145 PF00004 ATPase family associated with various cellular activities (AAA) CPQ91_21145 PF17862 AAA+ lid domain CPQ91_21150 PF01546 Peptidase family M20/M25/M40 CPQ91_21150 PF07687 Peptidase dimerisation domain CPQ91_21160 PF00251 Glycosyl hydrolases family 32 N-terminal domain CPQ91_21160 PF08244 Glycosyl hydrolases family 32 C terminal CPQ91_21165 PF01306 LacY proton/sugar symporter CPQ91_21170 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_21175 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_21185 PF00356 Bacterial regulatory proteins, lacI family CPQ91_21200 PF01717 Cobalamin-independent synthase, Catalytic domain CPQ91_21205 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase CPQ91_21210 PF00535 Glycosyl transferase family 2 CPQ91_21215 PF01370 NAD dependent epimerase/dehydratase family CPQ91_21245 PF07662 Na+ dependent nucleoside transporter C-terminus CPQ91_21245 PF01773 Na+ dependent nucleoside transporter N-terminus CPQ91_21250 PF18011 C-terminal domain found in long catalases CPQ91_21250 PF06628 Catalase-related immune-responsive CPQ91_21250 PF00199 Catalase CPQ91_21260 PF00232 Glycosyl hydrolase family 1 CPQ91_21265 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CPQ91_21265 PF00367 phosphotransferase system, EIIB CPQ91_21265 PF02378 Phosphotransferase system, EIIC CPQ91_21270 PF03123 CAT RNA binding domain CPQ91_21270 PF00874 PRD domain CPQ91_21275 PF02361 Cobalt transport protein CPQ91_21280 PF00005 ABC transporter CPQ91_21285 PF09819 ABC-type cobalt transport system, permease component CPQ91_21290 PF03070 TENA/THI-4/PQQC family CPQ91_21295 PF00463 Isocitrate lyase family CPQ91_21300 PF01274 Malate synthase CPQ91_21310 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase CPQ91_21315 PF02687 FtsX-like permease family CPQ91_21320 PF00005 ABC transporter CPQ91_21325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_21330 PF00486 Transcriptional regulatory protein, C terminal CPQ91_21330 PF00072 Response regulator receiver domain CPQ91_21335 PF00232 Glycosyl hydrolase family 1 CPQ91_21340 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CPQ91_21340 PF00367 phosphotransferase system, EIIB CPQ91_21340 PF02378 Phosphotransferase system, EIIC CPQ91_21350 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CPQ91_21355 PF02463 RecF/RecN/SMC N terminal domain CPQ91_21360 PF04616 Glycosyl hydrolases family 43 CPQ91_21360 PF16369 C-terminal lipocalin-like domain CPQ91_21365 PF00270 DEAD/DEAH box helicase CPQ91_21365 PF00271 Helicase conserved C-terminal domain CPQ91_21365 PF03880 DbpA RNA binding domain CPQ91_21395 PF02885 Glycosyl transferase family, helical bundle domain CPQ91_21395 PF00591 Glycosyl transferase family, a/b domain CPQ91_21395 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CPQ91_21400 PF07662 Na+ dependent nucleoside transporter C-terminus CPQ91_21400 PF01773 Na+ dependent nucleoside transporter N-terminus CPQ91_21405 PF01791 DeoC/LacD family aldolase CPQ91_21410 PF04198 Putative sugar-binding domain CPQ91_21425 PF00990 Diguanylate cyclase, GGDEF domain CPQ91_21430 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) CPQ91_21440 PF03170 Bacterial cellulose synthase subunit CPQ91_21445 PF00155 Aminotransferase class I and II CPQ91_21460 PF07478 D-ala D-ala ligase C-terminus CPQ91_21470 PF01116 Fructose-bisphosphate aldolase class-II CPQ91_21475 PF01261 Xylose isomerase-like TIM barrel CPQ91_21480 PF01261 Xylose isomerase-like TIM barrel CPQ91_21485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CPQ91_21485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CPQ91_21490 PF07690 Major Facilitator Superfamily CPQ91_21495 PF01261 Xylose isomerase-like TIM barrel CPQ91_21500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CPQ91_21500 PF00205 Thiamine pyrophosphate enzyme, central domain CPQ91_21500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPQ91_21505 PF00294 pfkB family carbohydrate kinase CPQ91_21510 PF04962 KduI/IolB family CPQ91_21515 PF00171 Aldehyde dehydrogenase family CPQ91_21520 PF00455 DeoR C terminal sensor domain CPQ91_21520 PF08220 DeoR-like helix-turn-helix domain CPQ91_21525 PF00248 Aldo/keto reductase family CPQ91_21530 PF03009 Glycerophosphoryl diester phosphodiesterase family CPQ91_21535 PF07690 Major Facilitator Superfamily CPQ91_21540 PF00183 Hsp90 protein CPQ91_21545 PF00005 ABC transporter CPQ91_21545 PF12848 ABC transporter CPQ91_21570 PF01497 Periplasmic binding protein CPQ91_21590 PF17910 FeoB cytosolic helical domain CPQ91_21590 PF07664 Ferrous iron transport protein B C terminus CPQ91_21590 PF07670 Nucleoside recognition CPQ91_21590 PF02421 Ferrous iron transport protein B CPQ91_21600 PF01757 Acyltransferase family CPQ91_21605 PF02687 FtsX-like permease family CPQ91_21610 PF00005 ABC transporter CPQ91_21615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_21620 PF00486 Transcriptional regulatory protein, C terminal CPQ91_21620 PF00072 Response regulator receiver domain CPQ91_21630 PF05227 CHASE3 domain CPQ91_21630 PF00672 HAMP domain CPQ91_21630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPQ91_21635 PF01235 Sodium:alanine symporter family CPQ91_21640 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CPQ91_21640 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CPQ91_21645 PF07745 Glycosyl hydrolase family 53 CPQ91_21650 PF02449 Beta-galactosidase CPQ91_21650 PF08533 Beta-galactosidase C-terminal domain CPQ91_21650 PF08532 Beta-galactosidase trimerisation domain CPQ91_21655 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_21660 PF00528 Binding-protein-dependent transport system inner membrane component CPQ91_21665 PF13416 Bacterial extracellular solute-binding protein CPQ91_21670 PF00356 Bacterial regulatory proteins, lacI family CPQ91_21675 PF00288 GHMP kinases N terminal domain CPQ91_21675 PF08544 GHMP kinases C terminal CPQ91_21675 PF10509 Galactokinase galactose-binding signature CPQ91_21680 PF16363 GDP-mannose 4,6 dehydratase CPQ91_21685 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CPQ91_21685 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CPQ91_21690 PF00480 ROK family CPQ91_21690 PF01325 Iron dependent repressor, N-terminal DNA binding domain CPQ91_21695 PF00392 Bacterial regulatory proteins, gntR family CPQ91_21695 PF07729 FCD domain CPQ91_21700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CPQ91_21700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CPQ91_21705 PF02447 GntP family permease CPQ91_21710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CPQ91_21710 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CPQ91_21715 PF00465 Iron-containing alcohol dehydrogenase CPQ91_21715 PF00171 Aldehyde dehydrogenase family CPQ91_21720 PF00578 AhpC/TSA family CPQ91_21725 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPQ91_21725 PF13192 Thioredoxin domain CPQ91_21750 PF00005 ABC transporter CPQ91_21760 PF07730 Histidine kinase CPQ91_21760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_21765 PF00072 Response regulator receiver domain CPQ91_21765 PF00196 Bacterial regulatory proteins, luxR family CPQ91_21780 PF00005 ABC transporter CPQ91_21780 PF00027 Cyclic nucleotide-binding domain CPQ91_21790 PF02590 Predicted SPOUT methyltransferase CPQ91_21795 PF14116 YyzF-like protein CPQ91_21805 PF00583 Acetyltransferase (GNAT) family CPQ91_21820 PF13180 PDZ domain CPQ91_21825 PF00753 Metallo-beta-lactamase superfamily CPQ91_21830 PF09648 YycH protein CPQ91_21835 PF07435 YycH protein CPQ91_21840 PF13426 PAS domain CPQ91_21840 PF00672 HAMP domain CPQ91_21840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPQ91_21840 PF00512 His Kinase A (phospho-acceptor) domain CPQ91_21845 PF00486 Transcriptional regulatory protein, C terminal CPQ91_21845 PF00072 Response regulator receiver domain CPQ91_21875 PF00709 Adenylosuccinate synthetase CPQ91_21885 PF00772 DnaB-like helicase N terminal domain CPQ91_21885 PF03796 DnaB-like helicase C terminal domain CPQ91_21890 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) CPQ91_21900 PF14174 YycC-like protein CPQ91_21905 PF07690 Major Facilitator Superfamily CPQ91_21910 PF01979 Amidohydrolase family CPQ91_21915 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CPQ91_21925 PF01380 SIS domain CPQ91_21930 PF02378 Phosphotransferase system, EIIC CPQ91_21930 PF00367 phosphotransferase system, EIIB CPQ91_21935 PF03948 Ribosomal protein L9, C-terminal domain CPQ91_21935 PF01281 Ribosomal protein L9, N-terminal domain CPQ91_21940 PF01368 DHH family CPQ91_21940 PF02272 DHHA1 domain CPQ91_21945 PF09991 Predicted membrane protein (DUF2232) CPQ91_21960 PF00582 Universal stress protein family CPQ91_21965 PF00916 Sulfate permease family CPQ91_21965 PF01740 STAS domain CPQ91_21970 PF07690 Major Facilitator Superfamily CPQ91_21975 PF01084 Ribosomal protein S18 CPQ91_21980 PF00436 Single-strand binding protein family CPQ91_21985 PF01250 Ribosomal protein S6 CPQ91_21990 PF06071 Protein of unknown function (DUF933) CPQ91_21990 PF01926 50S ribosome-binding GTPase CPQ91_22000 PF06107 Bacterial protein of unknown function (DUF951) CPQ91_22010 PF06866 Protein of unknown function (DUF1256) CPQ91_22015 PF02195 ParB-like nuclease domain CPQ91_22015 PF17762 HTH domain found in ParB protein CPQ91_22020 PF13614 AAA domain CPQ91_22025 PF02627 Carboxymuconolactone decarboxylase family CPQ91_22035 PF17762 HTH domain found in ParB protein CPQ91_22035 PF02195 ParB-like nuclease domain CPQ91_22040 PF02527 rRNA small subunit methyltransferase G CPQ91_22045 PF01134 Glucose inhibited division protein A CPQ91_22045 PF13932 GidA associated domain CPQ91_22050 PF01926 50S ribosome-binding GTPase CPQ91_22050 PF12631 MnmE helical domain CPQ91_22050 PF10396 GTP-binding protein TrmE N-terminus CPQ91_22055 PF14804 Jag N-terminus CPQ91_22055 PF01424 R3H domain CPQ91_22060 PF02096 60Kd inner membrane protein CPQ91_22065 PF00825 Ribonuclease P CPQ91_22070 PF00468 Ribosomal protein L34