locus-tag	class	description
CPQ91_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CPQ91_00010	COG0592	DNA-directed DNA polymerase activity
CPQ91_00015	COG2501	S4 domain
CPQ91_00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CPQ91_00030	COG0187	DNA topoisomerase II activity
CPQ91_00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CPQ91_00070	COG0517	IMP dehydrogenase activity
CPQ91_00070	COG0516	GMP reductase activity
CPQ91_00075	COG1686	Belongs to the peptidase S11 family
CPQ91_00080	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
CPQ91_00085	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
CPQ91_00090	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CPQ91_00095	COG1929	Belongs to the glycerate kinase type-1 family
CPQ91_00100	COG2610	gluconate transmembrane transporter activity
CPQ91_00105	COG3835	regulator
CPQ91_00120	COG1428	Deoxynucleoside kinase
CPQ91_00125	COG1428	Deoxynucleoside kinase
CPQ91_00130	COG1388	LysM domain
CPQ91_00130	COG3858	chitin binding
CPQ91_00135	COG1335	isochorismatase
CPQ91_00140	COG0590	tRNA wobble adenosine to inosine editing
CPQ91_00150	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CPQ91_00155	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CPQ91_00160	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CPQ91_00205	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
CPQ91_00210	COG3853	Toxic anion resistance protein (TelA)
CPQ91_00215	COG1982	Orn Lys Arg decarboxylase major
CPQ91_00220	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CPQ91_00225	COG3870	Protein conserved in bacteria
CPQ91_00230	COG1728	Protein conserved in bacteria
CPQ91_00235	COG0470	DNA polymerase III
CPQ91_00240	COG1774	PSP1 C-terminal conserved region
CPQ91_00245	COG4467	Involved in initiation control of chromosome replication
CPQ91_00250	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CPQ91_00255	COG2827	Endonuclease containing a URI domain
CPQ91_00260	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CPQ91_00265	COG2002	toxin-antitoxin pair type II binding
CPQ91_00270	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CPQ91_00270	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CPQ91_00275	COG0084	hydrolase, TatD family'
CPQ91_00280	COG3584	3D domain protein
CPQ91_00280	COG3583	domain protein
CPQ91_00285	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CPQ91_00290	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CPQ91_00300	COG4466	Protein conserved in bacteria
CPQ91_00310	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CPQ91_00315	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CPQ91_00320	COG0251	oxidation-reduction process
CPQ91_00325	COG2088	sporulation resulting in formation of a cellular spore
CPQ91_00330	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CPQ91_00335	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CPQ91_00340	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CPQ91_00345	COG0193	aminoacyl-tRNA hydrolase activity
CPQ91_00355	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CPQ91_00360	COG2002	toxin-antitoxin pair type II binding
CPQ91_00365	COG2244	polysaccharide biosynthetic process
CPQ91_00370	COG3956	TIGRFAM MazG family protein
CPQ91_00375	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CPQ91_00390	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CPQ91_00395	COG1098	S1 RNA binding domain
CPQ91_00410	COG2208	phosphoserine phosphatase activity
CPQ91_00415	COG2304	oxidoreductase activity
CPQ91_00420	COG0515	serine threonine protein kinase
CPQ91_00425	COG0037	tRNA processing
CPQ91_00435	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CPQ91_00440	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
CPQ91_00445	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CPQ91_00450	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CPQ91_00455	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CPQ91_00465	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CPQ91_00470	COG0512	Glutamine amidotransferase of anthranilate synthase
CPQ91_00475	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CPQ91_00480	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CPQ91_00485	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CPQ91_00490	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CPQ91_00495	COG1396	sequence-specific DNA binding
CPQ91_00500	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CPQ91_00505	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CPQ91_00585	COG4463	regulation of RNA biosynthetic process
CPQ91_00590	COG3880	PFAM UvrB UvrC protein
CPQ91_00595	COG3869	Catalyzes the specific phosphorylation of arginine residues in
CPQ91_00600	COG0542	response to heat
CPQ91_00605	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CPQ91_00610	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
CPQ91_00615	COG4956	integral membrane protein (PIN domain superfamily)
CPQ91_00620	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CPQ91_00625	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CPQ91_00630	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CPQ91_00635	COG1045	serine acetyltransferase
CPQ91_00640	COG0215	cysteine-tRNA ligase activity
CPQ91_00645	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
CPQ91_00650	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CPQ91_00655	COG3688	RNA-binding protein containing a PIN domain
CPQ91_00665	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CPQ91_00675	COG0250	Participates in transcription elongation, termination and antitermination
CPQ91_00680	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CPQ91_00685	COG0081	regulation of translation
CPQ91_00690	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CPQ91_00695	COG0222	ribosome binding
CPQ91_00700	COG2813	Specifically methylates the guanine in position
CPQ91_00705	COG0085	RNA polymerase activity
CPQ91_00710	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CPQ91_00715	COG1358	cellular component organization or biogenesis
CPQ91_00720	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CPQ91_00725	COG0049	tRNA binding
CPQ91_00730	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CPQ91_00735	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CPQ91_00740	COG0051	transcription antitermination factor activity, RNA binding
CPQ91_00745	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CPQ91_00750	COG0088	Forms part of the polypeptide exit tunnel
CPQ91_00755	COG0089	rRNA binding
CPQ91_00760	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CPQ91_00765	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CPQ91_00770	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CPQ91_00775	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CPQ91_00780	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CPQ91_00785	COG0255	Belongs to the universal ribosomal protein uL29 family
CPQ91_00790	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CPQ91_00795	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CPQ91_00800	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CPQ91_00805	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CPQ91_00810	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CPQ91_00815	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CPQ91_00820	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CPQ91_00825	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CPQ91_00830	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CPQ91_00835	COG1841	ribosomal large subunit assembly
CPQ91_00840	COG0200	Binds to the 23S rRNA
CPQ91_00845	COG0201	protein transport
CPQ91_00850	COG0563	adenylate kinase activity
CPQ91_00855	COG0024	Methionine aminopeptidase
CPQ91_00860	COG2163	COG2163 Ribosomal protein L14E L6E L27E
CPQ91_00865	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CPQ91_00870	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CPQ91_00875	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CPQ91_00880	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CPQ91_00885	COG0202	RNA polymerase activity
CPQ91_00890	COG0203	ribosomal protein L17
CPQ91_00895	COG1122	ATPase activity
CPQ91_00900	COG1122	ATPase activity
CPQ91_00905	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CPQ91_00910	COG0101	tRNA pseudouridine synthase activity
CPQ91_00915	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CPQ91_00920	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CPQ91_00925	COG2318	DinB family
CPQ91_00935	COG0860	N-Acetylmuramoyl-L-alanine amidase
CPQ91_00940	COG0489	protein tyrosine kinase activity
CPQ91_00950	COG2194	sulfuric ester hydrolase activity
CPQ91_00955	COG0726	polysaccharide deacetylase
CPQ91_00985	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CPQ91_00995	COG0385	Bile acid
CPQ91_01010	COG3876	Protein conserved in bacteria
CPQ91_01015	COG1472	Belongs to the glycosyl hydrolase 3 family
CPQ91_01020	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CPQ91_01025	COG1263	PTS System
CPQ91_01025	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CPQ91_01030	COG1737	Transcriptional regulator
CPQ91_01035	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CPQ91_01040	COG1683	Conserved Protein
CPQ91_01075	COG1595	DNA-templated transcription, initiation
CPQ91_01080	COG5662	AntiSigma factor
CPQ91_01085	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CPQ91_01090	COG4856	YbbR-like protein
CPQ91_01095	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CPQ91_01100	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CPQ91_01120	COG1725	Transcriptional regulator
CPQ91_01125	COG0640	Transcriptional regulator
CPQ91_01130	COG2814	Major facilitator Superfamily
CPQ91_01140	COG1132	(ABC) transporter
CPQ91_01145	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CPQ91_01170	COG1011	Hydrolase
CPQ91_01175	COG1113	amino acid transport
CPQ91_01180	COG2851	Citrate transporter
CPQ91_01185	COG3181	Tripartite tricarboxylate transporter family receptor
CPQ91_01190	COG4565	transcriptional regulatory protein
CPQ91_01195	COG3290	protein histidine kinase activity
CPQ91_01210	COG2211	Major facilitator Superfamily
CPQ91_01230	COG1331	Highly conserved protein containing a thioredoxin domain
CPQ91_01240	COG0477	Major facilitator Superfamily
CPQ91_01260	COG1283	sodium-dependent phosphate transmembrane transporter activity
CPQ91_01265	COG4682	membrane
CPQ91_01290	COG0697	spore germination
CPQ91_01295	COG2207	Transcriptional regulator
CPQ91_01295	COG1917	Cupin 2, conserved barrel domain protein
CPQ91_01315	COG0371	Dehydrogenase
CPQ91_01325	COG4213	ABC transporter substrate-binding protein
CPQ91_01340	COG4257	antibiotic catabolic process
CPQ91_01350	COG0833	amino acid
CPQ91_01355	COG2040	homocysteine
CPQ91_01365	COG1263	PTS System
CPQ91_01365	COG2190	(PTS) system
CPQ91_01365	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CPQ91_01370	COG0789	Transcriptional regulator
CPQ91_01375	COG2323	membrane
CPQ91_01390	COG2205	protein histidine kinase activity
CPQ91_01395	COG1115	amino acid carrier protein
CPQ91_01400	COG2066	Belongs to the glutaminase family
CPQ91_01405	COG4191	Histidine kinase
CPQ91_01410	COG0784	Response regulator, receiver
CPQ91_01435	COG3540	Alkaline phosphatase
CPQ91_01440	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CPQ91_01445	COG0805	protein transport
CPQ91_01450	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CPQ91_01455	COG1012	belongs to the aldehyde dehydrogenase family
CPQ91_01460	COG2271	Major facilitator Superfamily
CPQ91_01465	COG4948	Mandelate Racemase Muconate Lactonizing
CPQ91_01470	COG2186	Transcriptional regulator
CPQ91_01475	COG2721	sulfolactate sulfo-lyase activity
CPQ91_01485	COG2205	protein histidine kinase activity
CPQ91_01490	COG1131	(ABC) transporter
CPQ91_01515	COG3173	Aminoglycoside phosphotransferase
CPQ91_01520	COG1846	Transcriptional regulator
CPQ91_01525	COG0318	PFAM AMP-dependent synthetase and ligase
CPQ91_01545	COG0789	Transcriptional regulator
CPQ91_01570	COG0697	spore germination
CPQ91_01575	COG1714	RDD family
CPQ91_01580	COG3012	SEC-C Motif Domain Protein
CPQ91_01580	COG1405	negative regulation of cell septum assembly
CPQ91_01610	COG0583	DNA-binding transcription factor activity
CPQ91_01615	COG1942	4-Oxalocrotonate Tautomerase
CPQ91_01620	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_01635	COG1288	antiporter activity
CPQ91_01645	COG0456	acetyltransferase
CPQ91_01655	COG1164	Oligoendopeptidase f
CPQ91_01660	COG2261	transglycosylase associated protein
CPQ91_01670	COG0247	lactate metabolic process
CPQ91_01675	COG0277	FAD linked oxidase domain protein
CPQ91_01680	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CPQ91_01685	COG1447	Phosphotransferase system cellobiose-specific component IIA
CPQ91_01690	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CPQ91_01695	COG1486	melibiose metabolic process
CPQ91_01705	COG3394	polysaccharide catabolic process
CPQ91_01720	COG3591	Belongs to the peptidase S1B family
CPQ91_01725	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_01735	COG1595	DNA-templated transcription, initiation
CPQ91_01745	COG3773	Cell wall hydrolase
CPQ91_01750	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CPQ91_01755	COG3883	PFAM NLP P60 protein
CPQ91_01755	COG0791	NLP P60 protein
CPQ91_01770	COG1309	transcriptional regulator
CPQ91_01790	COG2310	stress, protein
CPQ91_01795	COG2310	stress, protein
CPQ91_01800	COG2310	stress, protein
CPQ91_01805	COG0861	Integral membrane protein TerC family
CPQ91_01825	COG3853	Toxic anion resistance protein (TelA)
CPQ91_01830	COG0785	Cytochrome C biogenesis protein
CPQ91_01840	COG0789	Transcriptional regulator
CPQ91_01845	COG2223	nitrite transmembrane transporter activity
CPQ91_01850	COG0039	L-malate dehydrogenase activity
CPQ91_01855	COG1620	l-lactate permease
CPQ91_01860	COG1280	lysine exporter protein (LysE YggA)
CPQ91_01865	COG1113	amino acid transport
CPQ91_01870	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CPQ91_01875	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CPQ91_01880	COG3541	Predicted nucleotidyltransferase
CPQ91_01885	COG0506	proline dehydrogenase activity
CPQ91_01890	COG1012	belongs to the aldehyde dehydrogenase family
CPQ91_01895	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CPQ91_01900	COG2508	Transcriptional regulator
CPQ91_01905	COG3689	TIGRFAM TIGR03943 family protein
CPQ91_01910	COG0701	Predicted permease
CPQ91_01915	COG3458	cephalosporin-C deacetylase activity
CPQ91_01935	COG0765	amino acid transport
CPQ91_01940	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CPQ91_01945	COG2249	NAD(P)H dehydrogenase (quinone) activity
CPQ91_01955	COG2723	6-phospho-beta-galactosidase activity
CPQ91_01965	COG3209	COG3209 Rhs family protein
CPQ91_01970	COG0515	serine threonine protein kinase
CPQ91_01970	COG3266	domain, Protein
CPQ91_01980	COG5444	nuclease activity
CPQ91_02005	COG1176	ABC-type spermidine putrescine transport system, permease component I
CPQ91_02010	COG1177	transmembrane transport
CPQ91_02015	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CPQ91_02020	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CPQ91_02025	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CPQ91_02030	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
CPQ91_02040	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CPQ91_02050	COG2819	hydrolase of the alpha beta superfamily
CPQ91_02060	COG2364	Membrane
CPQ91_02070	COG1131	(ABC) transporter
CPQ91_02095	COG1126	abc transporter atp-binding protein
CPQ91_02100	COG0765	amino acid transport
CPQ91_02105	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CPQ91_02110	COG3829	transcription factor binding
CPQ91_02115	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CPQ91_02120	COG0833	amino acid
CPQ91_02125	COG0010	Belongs to the arginase family
CPQ91_02130	COG0583	DNA-binding transcription factor activity
CPQ91_02135	COG0163	prenyltransferase activity
CPQ91_02140	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CPQ91_02190	COG5444	nuclease activity
CPQ91_02210	COG2972	Histidine kinase
CPQ91_02215	COG2207	Transcriptional regulator
CPQ91_02215	COG4753	response regulator
CPQ91_02220	COG4213	ABC transporter substrate-binding protein
CPQ91_02230	COG4214	carbohydrate transport
CPQ91_02235	COG2271	Major facilitator Superfamily
CPQ91_02240	COG1846	Transcriptional regulator
CPQ91_02240	COG0456	acetyltransferase
CPQ91_02245	COG1874	Beta-galactosidase
CPQ91_02255	COG4247	3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
CPQ91_02260	COG3104	oligopeptide transport
CPQ91_02265	COG5434	Belongs to the glycosyl hydrolase 28 family
CPQ91_02275	COG0697	spore germination
CPQ91_02285	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CPQ91_02290	COG0789	Transcriptional regulator
CPQ91_02295	COG1136	(ABC) transporter
CPQ91_02300	COG0577	efflux transmembrane transporter activity
CPQ91_02305	COG0745	RESPONSE REGULATOR receiver
CPQ91_02310	COG5002	protein histidine kinase activity
CPQ91_02310	COG3850	Histidine kinase
CPQ91_02320	COG0527	aspartate kinase activity
CPQ91_02325	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CPQ91_02330	COG4605	iron ion homeostasis
CPQ91_02335	COG4604	ABC transporter, ATP-binding protein
CPQ91_02340	COG4607	ABC-type enterochelin transport system periplasmic component
CPQ91_02345	COG2814	Major facilitator Superfamily
CPQ91_02350	COG1309	transcriptional regulator
CPQ91_02360	COG0778	Nitroreductase
CPQ91_02365	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CPQ91_02370	COG0640	Transcriptional regulator
CPQ91_02375	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CPQ91_02380	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CPQ91_02385	COG0531	amino acid
CPQ91_02390	COG1012	belongs to the aldehyde dehydrogenase family
CPQ91_02395	COG0697	spore germination
CPQ91_02405	COG4549	nuclear export factor GLE1
CPQ91_02410	COG2372	response to copper ion
CPQ91_02410	COG1276	copper resistance
CPQ91_02415	COG1349	DNA-binding transcription factor activity
CPQ91_02420	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CPQ91_02425	COG0243	molybdopterin cofactor binding
CPQ91_02430	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CPQ91_02435	COG2146	nitrite reductase [NAD(P)H] activity
CPQ91_02440	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CPQ91_02440	COG1587	Uroporphyrinogen-III synthase
CPQ91_02445	COG1802	Transcriptional regulator
CPQ91_02450	COG0471	metal ion transport
CPQ91_02455	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CPQ91_02460	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CPQ91_02475	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPQ91_02490	COG3959	Transketolase, thiamine diphosphate binding domain
CPQ91_02495	COG3958	Transketolase
CPQ91_02500	COG0561	phosphatase activity
CPQ91_02505	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
CPQ91_02510	COG1914	H( )-stimulated, divalent metal cation uptake system
CPQ91_02515	COG4336	lyase activity
CPQ91_02520	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CPQ91_02525	COG1984	allophanate hydrolase subunit 2
CPQ91_02530	COG1414	Transcriptional regulator
CPQ91_02535	COG2755	lipolytic protein G-D-S-L family
CPQ91_02540	COG2213	PTS system mannitol-specific
CPQ91_02545	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPQ91_02550	COG0246	Mannitol dehydrogenase
CPQ91_02555	COG3711	transcriptional antiterminator
CPQ91_02560	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_02565	COG1917	Cupin 2, conserved barrel domain protein
CPQ91_02575	COG3871	stress protein (general stress protein 26)
CPQ91_02585	COG1316	TRANSCRIPTIONal
CPQ91_02590	COG2814	Major facilitator Superfamily
CPQ91_02600	COG1522	sequence-specific DNA binding
CPQ91_02605	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CPQ91_02605	COG0551	DNA topoisomerase type I activity
CPQ91_02610	COG0531	amino acid
CPQ91_02615	COG0028	Belongs to the TPP enzyme family
CPQ91_02620	COG3397	chitin binding
CPQ91_02630	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CPQ91_02635	COG1914	H( )-stimulated, divalent metal cation uptake system
CPQ91_02640	COG2261	transglycosylase associated protein
CPQ91_02645	COG1027	Aspartate ammonia-lyase
CPQ91_02650	COG1819	glycosyl
CPQ91_02655	COG4876	unkown
CPQ91_02660	COG2217	Heavy metal translocating P-type atpase
CPQ91_02670	COG0662	Cupin 2, conserved barrel domain protein
CPQ91_02680	COG0628	permease
CPQ91_02685	COG1301	dicarboxylic acid transport
CPQ91_02690	COG1131	(ABC) transporter
CPQ91_02695	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CPQ91_02705	COG1960	acyl-CoA dehydrogenase activity
CPQ91_02720	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CPQ91_02725	COG1181	Belongs to the D-alanine--D-alanine ligase family
CPQ91_02730	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CPQ91_02740	COG0513	Belongs to the DEAD box helicase family
CPQ91_02745	COG3402	PFAM membrane-flanked domain
CPQ91_02750	COG3428	Bacterial PH domain
CPQ91_02755	COG0705	Rhomboid family
CPQ91_02760	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CPQ91_02765	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CPQ91_02770	COG0864	Transcriptional regulator
CPQ91_02775	COG2337	Toxic component of a toxin-antitoxin (TA) module
CPQ91_02780	COG1366	Belongs to the anti-sigma-factor antagonist family
CPQ91_02785	COG1366	Belongs to the anti-sigma-factor antagonist family
CPQ91_02790	COG2172	sigma factor antagonist activity
CPQ91_02795	COG2208	phosphoserine phosphatase activity
CPQ91_02805	COG2172	sigma factor antagonist activity
CPQ91_02810	COG1191	sigma factor activity
CPQ91_02815	COG2208	phosphoserine phosphatase activity
CPQ91_02820	COG2183	response to ionizing radiation
CPQ91_02825	COG1309	transcriptional regulator
CPQ91_02830	COG1033	growth of symbiont in host cell
CPQ91_02830	COG2409	Drug exporters of the RND superfamily
CPQ91_02840	COG3091	SprT-like family
CPQ91_02885	COG1476	TRANSCRIPTIONal
CPQ91_02890	COG3239	Fatty acid desaturase
CPQ91_02895	COG1278	Cold shock
CPQ91_02900	COG1063	alcohol dehydrogenase
CPQ91_02910	COG2364	Membrane
CPQ91_02915	COG1846	Transcriptional regulator
CPQ91_02920	COG0456	acetyltransferase
CPQ91_02925	COG2808	Putative FMN-binding domain
CPQ91_02935	COG1733	regulation of RNA biosynthetic process
CPQ91_02940	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CPQ91_02950	COG0583	DNA-binding transcription factor activity
CPQ91_02965	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
CPQ91_02970	COG1113	amino acid transport
CPQ91_02985	COG1595	DNA-templated transcription, initiation
CPQ91_02995	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CPQ91_02995	COG2755	lipolytic protein G-D-S-L family
CPQ91_03000	COG2814	Major facilitator Superfamily
CPQ91_03005	COG2972	Histidine kinase
CPQ91_03005	COG0745	RESPONSE REGULATOR receiver
CPQ91_03010	COG3279	Response regulator of the LytR AlgR family
CPQ91_03020	COG3764	Sortase (surface protein transpeptidase)
CPQ91_03025	COG2814	Major facilitator Superfamily
CPQ91_03065	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
CPQ91_03070	COG0802	atpase or kinase
CPQ91_03075	COG1214	PFAM Peptidase M22, glycoprotease
CPQ91_03080	COG0456	acetyltransferase
CPQ91_03085	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CPQ91_03090	COG0488	(ABC) transporter
CPQ91_03095	COG0315	cyclic pyranopterin monophosphate synthase activity
CPQ91_03100	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CPQ91_03105	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CPQ91_03110	COG0805	protein transport
CPQ91_03120	COG1266	CAAX protease self-immunity
CPQ91_03125	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CPQ91_03130	COG0459	protein refolding
CPQ91_03165	COG2720	vancomycin resistance protein
CPQ91_03180	COG2135	peptidase activity
CPQ91_03190	COG1309	transcriptional regulator
CPQ91_03195	COG0574	Belongs to the PEP-utilizing enzyme family
CPQ91_03195	COG3848	Pyruvate phosphate dikinase
CPQ91_03205	COG3189	MarR family transcriptional regulator
CPQ91_03210	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
CPQ91_03215	COG2272	Belongs to the type-B carboxylesterase lipase family
CPQ91_03220	COG2814	Major facilitator Superfamily
CPQ91_03225	COG1842	Phage shock protein A
CPQ91_03230	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CPQ91_03235	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
CPQ91_03240	COG4260	virion core protein, lumpy skin disease virus
CPQ91_03250	COG1378	Sugar-specific transcriptional regulator TrmB
CPQ91_03255	COG1280	lysine exporter protein (LysE YggA)
CPQ91_03260	COG3339	Conserved Protein
CPQ91_03265	COG0772	Belongs to the SEDS family
CPQ91_03270	COG0772	Belongs to the SEDS family
CPQ91_03295	COG0726	polysaccharide deacetylase
CPQ91_03305	COG1609	Transcriptional regulator
CPQ91_03310	COG0366	Alpha amylase catalytic
CPQ91_03315	COG2182	Extracellular solute-binding protein
CPQ91_03320	COG1175	transmembrane transport
CPQ91_03325	COG3833	ABC-type maltose transport systems, permease component
CPQ91_03330	COG5521	maltodextrose utilization protein MalA
CPQ91_03335	COG1554	hydrolase, family 65, central catalytic
CPQ91_03340	COG0366	Alpha amylase catalytic
CPQ91_03345	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CPQ91_03350	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CPQ91_03355	COG1846	Transcriptional regulator
CPQ91_03370	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CPQ91_03375	COG0823	Involved in the tonB-independent uptake of proteins
CPQ91_03405	COG0702	epimerase
CPQ91_03415	COG2132	Multicopper oxidase
CPQ91_03430	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CPQ91_03435	COG0714	Associated with various cellular activities
CPQ91_03440	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
CPQ91_03445	COG1305	Transglutaminase-like
CPQ91_03450	COG0519	Catalyzes the synthesis of GMP from XMP
CPQ91_03450	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CPQ91_03460	COG2252	PERMEase
CPQ91_03475	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
CPQ91_03485	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CPQ91_03490	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CPQ91_03495	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CPQ91_03500	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CPQ91_03505	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CPQ91_03510	COG0047	phosphoribosylformylglycinamidine synthase activity
CPQ91_03515	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CPQ91_03520	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CPQ91_03525	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CPQ91_03530	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CPQ91_03535	COG0138	bifunctional purine biosynthesis protein purh
CPQ91_03540	COG0151	Belongs to the GarS family
CPQ91_03550	COG2124	cytochrome p450
CPQ91_03570	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
CPQ91_03575	COG1470	cell adhesion involved in biofilm formation
CPQ91_03580	COG4496	protein, YerC YecD
CPQ91_03585	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
CPQ91_03590	COG0210	DNA helicase
CPQ91_03595	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CPQ91_03600	COG4851	CamS sex pheromone cAM373 precursor
CPQ91_03605	COG2188	Transcriptional regulator
CPQ91_03625	COG1735	metal-dependent hydrolase with the TIM-barrel fold
CPQ91_03630	COG0626	cystathionine gamma-synthase activity
CPQ91_03635	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
CPQ91_03640	COG3457	Alanine racemase
CPQ91_03645	COG0363	glucosamine-6-phosphate deaminase activity
CPQ91_03650	COG1285	pathogenesis
CPQ91_03655	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CPQ91_03660	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CPQ91_03665	COG0154	amidase activity
CPQ91_03670	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CPQ91_03685	COG4124	Belongs to the glycosyl hydrolase 26 family
CPQ91_03690	COG1309	transcriptional regulator
CPQ91_03695	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CPQ91_03705	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CPQ91_03710	COG1957	nucleoside hydrolase
CPQ91_03715	COG1597	lipid kinase activity
CPQ91_03720	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CPQ91_03735	COG1401	restriction endodeoxyribonuclease activity
CPQ91_03745	COG0457	Tetratricopeptide repeat
CPQ91_03760	COG4753	response regulator
CPQ91_03760	COG2207	Transcriptional regulator
CPQ91_03775	COG0697	spore germination
CPQ91_03780	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CPQ91_03785	COG0697	spore germination
CPQ91_03790	COG0217	transcriptional regulatory protein
CPQ91_03805	COG1012	belongs to the aldehyde dehydrogenase family
CPQ91_03810	COG0840	transmembrane signaling receptor activity
CPQ91_03815	COG0471	metal ion transport
CPQ91_03820	COG0488	(ABC) transporter
CPQ91_03830	COG1469	GTP cyclohydrolase I activity
CPQ91_03845	COG0523	cobalamin synthesis protein
CPQ91_03850	COG1424	Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
CPQ91_03855	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CPQ91_03860	COG0156	8-amino-7-oxononanoate synthase activity
CPQ91_03865	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CPQ91_03870	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CPQ91_03875	COG2124	cytochrome p450
CPQ91_03885	COG0789	Transcriptional regulator
CPQ91_03890	COG2814	Major facilitator Superfamily
CPQ91_03900	COG0488	(ABC) transporter
CPQ91_03905	COG0513	Belongs to the DEAD box helicase family
CPQ91_03910	COG2130	NADP-dependent
CPQ91_03925	COG0471	metal ion transport
CPQ91_03940	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CPQ91_03950	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
CPQ91_03955	COG5658	integral membrane protein
CPQ91_03960	COG0640	Transcriptional regulator
CPQ91_03965	COG1254	Belongs to the acylphosphatase family
CPQ91_03970	COG2258	MOSC domain
CPQ91_03985	COG0024	Methionine aminopeptidase
CPQ91_03990	COG1368	sulfuric ester hydrolase activity
CPQ91_04000	COG1115	amino acid carrier protein
CPQ91_04005	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CPQ91_04005	COG1263	PTS System
CPQ91_04010	COG0366	Alpha amylase catalytic
CPQ91_04015	COG2188	Transcriptional regulator
CPQ91_04040	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CPQ91_04045	COG1045	serine acetyltransferase
CPQ91_04060	COG1215	transferase activity, transferring glycosyl groups
CPQ91_04065	COG0463	Glycosyl transferase, family 2
CPQ91_04065	COG0457	Tetratricopeptide repeat
CPQ91_04075	COG0673	inositol 2-dehydrogenase activity
CPQ91_04090	COG1733	regulation of RNA biosynthetic process
CPQ91_04095	COG0778	Nitroreductase
CPQ91_04100	COG0737	Belongs to the 5'-nucleotidase family
CPQ91_04105	COG0693	protein deglycase activity
CPQ91_04110	COG4840	Belongs to the UPF0435 family
CPQ91_04115	COG1115	amino acid carrier protein
CPQ91_04120	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CPQ91_04125	COG4980	gas vesicle protein
CPQ91_04130	COG1295	ribonuclease BN
CPQ91_04135	COG0477	Major facilitator Superfamily
CPQ91_04145	COG0387	Pfam Sodium calcium exchanger
CPQ91_04155	COG0535	radical SAM domain protein
CPQ91_04165	COG0726	polysaccharide deacetylase
CPQ91_04170	COG0371	Dehydrogenase
CPQ91_04180	COG0598	Magnesium transport protein CorA
CPQ91_04185	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CPQ91_04190	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CPQ91_04195	COG4637	Psort location Cytoplasmic, score
CPQ91_04220	COG1819	glycosyl
CPQ91_04230	COG0477	Major facilitator Superfamily
CPQ91_04235	COG1263	PTS System
CPQ91_04235	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CPQ91_04240	COG3711	transcriptional antiterminator
CPQ91_04245	COG0288	reversible hydration of carbon dioxide
CPQ91_04250	COG3002	Belongs to the UPF0753 family
CPQ91_04255	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CPQ91_04260	COG5609	conserved protein (DUF2294)
CPQ91_04270	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CPQ91_04275	COG0022	dehydrogenase e1 component
CPQ91_04280	COG0508	dehydrogenase complex catalyzes the overall conversion of
CPQ91_04285	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CPQ91_04290	COG3284	Transcriptional regulator
CPQ91_04295	COG1742	UPF0060 membrane protein
CPQ91_04300	COG1486	melibiose metabolic process
CPQ91_04305	COG1737	Transcriptional regulator
CPQ91_04310	COG1263	PTS System
CPQ91_04310	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CPQ91_04325	COG1733	regulation of RNA biosynthetic process
CPQ91_04330	COG2259	Doxx family
CPQ91_04335	COG2514	catechol 2,3-dioxygenase activity
CPQ91_04345	COG3507	Belongs to the glycosyl hydrolase 43 family
CPQ91_04350	COG2207	Transcriptional regulator
CPQ91_04350	COG1917	Cupin 2, conserved barrel domain protein
CPQ91_04360	COG2249	NAD(P)H dehydrogenase (quinone) activity
CPQ91_04365	COG1051	belongs to the nudix hydrolase family
CPQ91_04380	COG0392	lysyltransferase activity
CPQ91_04380	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CPQ91_04385	COG0384	phenazine biosynthesis protein PhzF
CPQ91_04390	COG0778	Nitroreductase
CPQ91_04410	COG1090	epimerase
CPQ91_04415	COG2137	regulation of response to DNA damage stimulus
CPQ91_04445	COG0463	Glycosyl transferase, family 2
CPQ91_04455	COG4485	Bacterial membrane protein, YfhO
CPQ91_04460	COG1988	membrane-bound metal-dependent
CPQ91_04465	COG1194	a g-specific adenine glycosylase
CPQ91_04475	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_04490	COG3557	Belongs to the UPF0374 family
CPQ91_04495	COG1132	(ABC) transporter
CPQ91_04500	COG0444	Belongs to the ABC transporter superfamily
CPQ91_04505	COG4608	Belongs to the ABC transporter superfamily
CPQ91_04510	COG0747	negative chemotaxis
CPQ91_04525	COG4129	membrane
CPQ91_04530	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CPQ91_04535	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CPQ91_04540	COG0735	belongs to the Fur family
CPQ91_04650	COG0457	Tetratricopeptide repeat
CPQ91_04695	COG5444	nuclease activity
CPQ91_04710	COG5444	nuclease activity
CPQ91_04715	COG0457	Tetratricopeptide repeat
CPQ91_04720	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CPQ91_04730	COG0710	3-dehydroquinate dehydratase activity
CPQ91_04735	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
CPQ91_04740	COG1116	anion transmembrane transporter activity
CPQ91_04745	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CPQ91_04750	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CPQ91_04755	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CPQ91_04765	COG1476	TRANSCRIPTIONal
CPQ91_04775	COG1131	(ABC) transporter
CPQ91_04795	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CPQ91_04805	COG3382	B3 4 domain protein
CPQ91_04810	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CPQ91_04820	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CPQ91_04825	COG0789	Transcriptional regulator
CPQ91_04830	COG1664	Polymer-forming cytoskeletal
CPQ91_04840	COG2766	serine protein kinase
CPQ91_04845	COG2718	Belongs to the UPF0229 family
CPQ91_04850	COG1566	PFAM secretion protein HlyD family protein
CPQ91_04855	COG2814	Major facilitator Superfamily
CPQ91_04860	COG0655	NAD(P)H dehydrogenase (quinone) activity
CPQ91_04880	COG1131	(ABC) transporter
CPQ91_04885	COG1131	(ABC) transporter
CPQ91_04890	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CPQ91_04895	COG1278	Cold shock
CPQ91_04900	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CPQ91_04905	COG2011	ABC-type metal ion transport system permease component
CPQ91_04910	COG1464	Belongs to the NlpA lipoprotein family
CPQ91_04915	COG1823	symporter activity
CPQ91_04940	COG5577	PFAM Coat F domain
CPQ91_04945	COG5002	protein histidine kinase activity
CPQ91_04950	COG0737	Belongs to the 5'-nucleotidase family
CPQ91_04950	COG4085	toxin activity
CPQ91_04950	COG1525	nuclease
CPQ91_04955	COG3764	Sortase (surface protein transpeptidase)
CPQ91_04960	COG0564	pseudouridine synthase activity
CPQ91_04970	COG0517	IMP dehydrogenase activity
CPQ91_04975	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CPQ91_04980	COG3153	acetyltransferase
CPQ91_04980	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CPQ91_04985	COG0488	(ABC) transporter
CPQ91_04995	COG2116	formate transmembrane transporter activity
CPQ91_05000	COG0679	Auxin Efflux Carrier
CPQ91_05005	COG0604	alcohol dehydrogenase
CPQ91_05010	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CPQ91_05015	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CPQ91_05020	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CPQ91_05025	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CPQ91_05030	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CPQ91_05045	COG4585	Histidine kinase
CPQ91_05045	COG2203	Gaf domain
CPQ91_05050	COG2197	response regulator
CPQ91_05055	COG0431	NADPH-dependent FMN reductase
CPQ91_05070	COG1959	2 iron, 2 sulfur cluster binding
CPQ91_05075	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CPQ91_05075	COG1017	nitric oxide dioxygenase activity
CPQ91_05080	COG2719	SpoVR family
CPQ91_05085	COG1388	LysM domain
CPQ91_05085	COG0791	NLP P60 protein
CPQ91_05090	COG0583	DNA-binding transcription factor activity
CPQ91_05095	COG0372	Belongs to the citrate synthase family
CPQ91_05100	COG2133	pyrroloquinoline quinone binding
CPQ91_05105	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_05110	COG0733	neurotransmitter:sodium symporter activity
CPQ91_05120	COG3708	Transcriptional regulator
CPQ91_05120	COG2207	Transcriptional regulator
CPQ91_05145	COG1595	DNA-templated transcription, initiation
CPQ91_05150	COG0662	Cupin 2, conserved barrel domain protein
CPQ91_05160	COG0204	Acyl-transferase
CPQ91_05165	COG3152	Membrane
CPQ91_05175	COG1309	transcriptional regulator
CPQ91_05180	COG1253	flavin adenine dinucleotide binding
CPQ91_05185	COG0789	Transcriptional regulator
CPQ91_05190	COG1253	flavin adenine dinucleotide binding
CPQ91_05210	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CPQ91_05215	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CPQ91_05220	COG0584	glycerophosphoryl diester phosphodiesterase
CPQ91_05230	COG0668	transmembrane transport
CPQ91_05235	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CPQ91_05245	COG0726	polysaccharide deacetylase
CPQ91_05255	COG1757	Na H antiporter
CPQ91_05260	COG2017	converts alpha-aldose to the beta-anomer
CPQ91_05285	COG0589	response to stress
CPQ91_05290	COG1132	(ABC) transporter
CPQ91_05295	COG1132	(ABC) transporter
CPQ91_05300	COG0702	epimerase
CPQ91_05315	COG3842	ATPase activity
CPQ91_05320	COG2508	Transcriptional regulator
CPQ91_05330	COG0189	ligase activity
CPQ91_05335	COG0189	ligase activity
CPQ91_05340	COG4399	Belongs to the UPF0754 family
CPQ91_05345	COG3679	Belongs to the UPF0342 family
CPQ91_05355	COG0561	phosphatase activity
CPQ91_05360	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CPQ91_05365	COG0475	glutathione-regulated potassium exporter activity
CPQ91_05370	COG0490	domain, Protein
CPQ91_05380	COG1024	Enoyl-CoA hydratase
CPQ91_05385	COG0457	Tetratricopeptide repeat
CPQ91_05400	COG4152	abc transporter atp-binding protein
CPQ91_05405	COG1668	transmembrane transport
CPQ91_05410	COG0420	3'-5' exonuclease activity
CPQ91_05415	COG4717	serine-type aminopeptidase activity
CPQ91_05420	COG3481	metal-dependent phosphohydrolase, HD sub domain
CPQ91_05430	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CPQ91_05460	COG1846	Transcriptional regulator
CPQ91_05465	COG4980	gas vesicle protein
CPQ91_05480	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CPQ91_05485	COG0537	adenosine 5'-monophosphoramidase activity
CPQ91_05495	COG1131	(ABC) transporter
CPQ91_05500	COG4473	ABC transporter
CPQ91_05510	COG1473	amidohydrolase
CPQ91_05515	COG3069	C4-dicarboxylate transmembrane transporter activity
CPQ91_05520	COG2329	Antibiotic biosynthesis monooxygenase
CPQ91_05525	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CPQ91_05530	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CPQ91_05545	COG1309	transcriptional regulator
CPQ91_05550	COG1511	domain protein
CPQ91_05555	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CPQ91_05560	COG1363	Peptidase, m42
CPQ91_05570	COG1301	dicarboxylic acid transport
CPQ91_05580	COG1234	tRNA 3'-trailer cleavage
CPQ91_05585	COG0095	Lipoate-protein ligase
CPQ91_05590	COG0318	PFAM AMP-dependent synthetase and ligase
CPQ91_05600	COG1396	sequence-specific DNA binding
CPQ91_05615	COG0501	Belongs to the peptidase M48B family
CPQ91_05625	COG0697	spore germination
CPQ91_05630	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CPQ91_05635	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CPQ91_05640	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CPQ91_05645	COG0406	alpha-ribazole phosphatase activity
CPQ91_05650	COG0840	transmembrane signaling receptor activity
CPQ91_05655	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CPQ91_05655	COG0723	plastoquinol--plastocyanin reductase activity
CPQ91_05660	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_05670	COG4903	ComK protein
CPQ91_05680	COG0398	Pfam SNARE associated Golgi protein
CPQ91_05685	COG0681	Belongs to the peptidase S26 family
CPQ91_05690	COG1404	Belongs to the peptidase S8 family
CPQ91_05700	COG2508	Transcriptional regulator
CPQ91_05710	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CPQ91_05720	COG3257	ureidoglycine aminohydrolase activity
CPQ91_05725	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CPQ91_05730	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CPQ91_05735	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CPQ91_05740	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CPQ91_05750	COG0549	Belongs to the carbamate kinase family
CPQ91_05765	COG0457	Tetratricopeptide repeat
CPQ91_05805	COG1486	melibiose metabolic process
CPQ91_05810	COG3180	Ammonia monooxygenase
CPQ91_05825	COG3546	catalase activity
CPQ91_05830	COG0318	PFAM AMP-dependent synthetase and ligase
CPQ91_05835	COG0477	Major facilitator Superfamily
CPQ91_05835	COG2814	Major facilitator Superfamily
CPQ91_05845	COG5002	protein histidine kinase activity
CPQ91_05850	COG0745	RESPONSE REGULATOR receiver
CPQ91_05855	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
CPQ91_05860	COG0725	ABC transporter, periplasmic molybdate-binding protein
CPQ91_05865	COG4149	molybdate abc transporter
CPQ91_05870	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
CPQ91_05875	COG1074	ATP-dependent DNA helicase activity
CPQ91_05880	COG0420	3'-5' exonuclease activity
CPQ91_05885	COG0419	ATPase involved in DNA repair
CPQ91_05930	COG5337	Spore coat protein CotH
CPQ91_05940	COG0179	Fumarylacetoacetate (FAA) hydrolase
CPQ91_05960	COG0367	asparagine synthase
CPQ91_05965	COG0004	ammonium transporteR
CPQ91_05970	COG0347	Belongs to the P(II) protein family
CPQ91_05975	COG0534	Mate efflux family protein
CPQ91_05980	COG2207	Transcriptional regulator
CPQ91_05980	COG1917	Cupin 2, conserved barrel domain protein
CPQ91_05990	COG1609	Transcriptional regulator
CPQ91_05995	COG0673	inositol 2-dehydrogenase activity
CPQ91_06020	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CPQ91_06030	COG0076	glutamate decarboxylase activity
CPQ91_06055	COG2153	protein acetylation
CPQ91_06060	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_06065	COG2378	regulation of single-species biofilm formation
CPQ91_06070	COG1410	methionine synthase
CPQ91_06070	COG0646	methionine synthase
CPQ91_06075	COG0646	methionine synthase
CPQ91_06075	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CPQ91_06080	COG1666	GTP binding
CPQ91_06085	COG2996	Protein conserved in bacteria
CPQ91_06100	COG1307	EDD domain protein, DegV family
CPQ91_06105	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CPQ91_06115	COG0516	GMP reductase activity
CPQ91_06125	COG0561	phosphatase activity
CPQ91_06130	COG1073	alpha beta
CPQ91_06135	COG2151	metal-sulfur cluster biosynthetic enzyme
CPQ91_06145	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CPQ91_06150	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CPQ91_06155	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CPQ91_06160	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CPQ91_06165	COG0505	Belongs to the CarA family
CPQ91_06170	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CPQ91_06175	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CPQ91_06180	COG1968	undecaprenyl-diphosphatase activity
CPQ91_06195	COG2267	carboxylic ester hydrolase activity
CPQ91_06205	COG1744	ABC transporter substrate-binding protein PnrA-like
CPQ91_06220	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CPQ91_06225	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CPQ91_06230	COG5504	Zn-dependent protease
CPQ91_06235	COG0444	Belongs to the ABC transporter superfamily
CPQ91_06240	COG4608	Belongs to the ABC transporter superfamily
CPQ91_06250	COG0601	transmembrane transport
CPQ91_06255	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CPQ91_06280	COG0180	Tryptophanyl-tRNA synthetase
CPQ91_06290	COG4166	transmembrane transport
CPQ91_06295	COG0601	transmembrane transport
CPQ91_06300	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CPQ91_06305	COG0444	Belongs to the ABC transporter superfamily
CPQ91_06310	COG4608	Belongs to the ABC transporter superfamily
CPQ91_06315	COG0456	acetyltransferase
CPQ91_06320	COG1393	Belongs to the ArsC family
CPQ91_06325	COG0861	Integral membrane protein TerC family
CPQ91_06330	COG4862	establishment of competence for transformation
CPQ91_06350	COG4565	transcriptional regulatory protein
CPQ91_06355	COG3290	protein histidine kinase activity
CPQ91_06360	COG4469	Competence protein
CPQ91_06365	COG1164	Oligoendopeptidase f
CPQ91_06380	COG2346	COG2346, Truncated hemoglobins
CPQ91_06385	COG0741	lytic transglycosylase activity
CPQ91_06390	COG4116	CYTH
CPQ91_06400	COG2357	RelA SpoT domain protein
CPQ91_06405	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CPQ91_06410	COG0564	pseudouridine synthase activity
CPQ91_06415	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CPQ91_06425	COG0475	glutathione-regulated potassium exporter activity
CPQ91_06425	COG0569	domain protein
CPQ91_06430	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CPQ91_06435	COG0352	thiamine-phosphate diphosphorylase activity
CPQ91_06445	COG2104	thiamine diphosphate biosynthetic process
CPQ91_06450	COG2022	thiamine diphosphate biosynthetic process
CPQ91_06455	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CPQ91_06460	COG0351	phosphomethylpyrimidine kinase
CPQ91_06465	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CPQ91_06520	COG0210	DNA helicase
CPQ91_06530	COG0586	Pfam SNARE associated Golgi protein
CPQ91_06535	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CPQ91_06540	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CPQ91_06545	COG2246	polysaccharide biosynthetic process
CPQ91_06550	COG2153	protein acetylation
CPQ91_06555	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
CPQ91_06560	COG2382	esterase
CPQ91_06580	COG0626	cystathionine gamma-synthase activity
CPQ91_06585	COG0626	cystathionine gamma-synthase activity
CPQ91_06590	COG5505	Protein of unknown function (DUF819)
CPQ91_06610	COG3507	Belongs to the glycosyl hydrolase 43 family
CPQ91_06630	COG0110	maltose O-acetyltransferase activity
CPQ91_06640	COG0583	DNA-binding transcription factor activity
CPQ91_06645	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CPQ91_06650	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CPQ91_06655	COG0583	DNA-binding transcription factor activity
CPQ91_06660	COG0697	spore germination
CPQ91_06665	COG0346	lactoylglutathione lyase activity
CPQ91_06675	COG1388	LysM domain
CPQ91_06675	COG3584	3D domain protein
CPQ91_06680	COG2814	Major facilitator Superfamily
CPQ91_06685	COG1309	transcriptional regulator
CPQ91_06705	COG5444	nuclease activity
CPQ91_06710	COG4195	phage-related replication protein
CPQ91_06715	COG2856	Zn peptidase
CPQ91_06720	COG1396	sequence-specific DNA binding
CPQ91_06735	COG1522	sequence-specific DNA binding
CPQ91_06740	COG1484	DNA-dependent DNA replication
CPQ91_06755	COG1595	DNA-templated transcription, initiation
CPQ91_06760	COG3728	DNA packaging
CPQ91_06760	COG5484	DNA packaging
CPQ91_06765	COG1783	phage Terminase large subunit
CPQ91_06770	COG5518	Phage portal protein
CPQ91_06775	COG0338	D12 class N6 adenine-specific DNA methyltransferase
CPQ91_06780	COG4653	Phage capsid family
CPQ91_06830	COG3953	SLT domain
CPQ91_06830	COG5412	phage tail tape measure protein
CPQ91_06835	COG1652	LysM domain
CPQ91_06840	COG4193	domain, Protein
CPQ91_06850	COG3628	GPW Gp25 family protein
CPQ91_06855	COG3299	homolog of phage Mu protein gp47
CPQ91_06860	COG3778	Protein conserved in bacteria
CPQ91_06895	COG1802	Transcriptional regulator
CPQ91_06900	COG1063	alcohol dehydrogenase
CPQ91_06905	COG1312	Catalyzes the dehydration of D-mannonate
CPQ91_06910	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_06915	COG1063	alcohol dehydrogenase
CPQ91_06920	COG2271	Major facilitator Superfamily
CPQ91_06935	COG0306	phosphate transporter
CPQ91_06940	COG1392	Phosphate transport regulator
CPQ91_06945	COG0405	Gamma-glutamyltransferase
CPQ91_06950	COG5578	integral membrane protein
CPQ91_06955	COG2972	Histidine kinase
CPQ91_06960	COG2207	Transcriptional regulator
CPQ91_06960	COG4753	response regulator
CPQ91_06965	COG1653	transport
CPQ91_06970	COG1175	transmembrane transport
CPQ91_06975	COG0395	ABC-type sugar transport system, permease component
CPQ91_06980	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
CPQ91_06985	COG2207	Transcriptional regulator
CPQ91_06990	COG2755	lipolytic protein G-D-S-L family
CPQ91_07000	COG5578	integral membrane protein
CPQ91_07005	COG3401	FG-GAP repeat protein
CPQ91_07015	COG2755	lipolytic protein G-D-S-L family
CPQ91_07020	COG3401	FG-GAP repeat protein
CPQ91_07025	COG0667	Aldo Keto reductase
CPQ91_07035	COG1874	Beta-galactosidase
CPQ91_07045	COG1653	transport
CPQ91_07050	COG4209	transmembrane transport
CPQ91_07055	COG0395	ABC-type sugar transport system, permease component
CPQ91_07060	COG0531	amino acid
CPQ91_07065	COG0346	lactoylglutathione lyase activity
CPQ91_07075	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CPQ91_07080	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CPQ91_07085	COG2362	D-Aminopeptidase
CPQ91_07090	COG0601	transmembrane transport
CPQ91_07095	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CPQ91_07100	COG0444	Belongs to the ABC transporter superfamily
CPQ91_07105	COG4166	transmembrane transport
CPQ91_07110	COG1619	proteins homologs of microcin C7 resistance protein MccF
CPQ91_07115	COG4948	Mandelate Racemase Muconate Lactonizing
CPQ91_07120	COG0791	NLP P60 protein
CPQ91_07125	COG4608	Belongs to the ABC transporter superfamily
CPQ91_07130	COG1834	amidinotransferase
CPQ91_07140	COG2323	membrane
CPQ91_07145	COG3866	Pectate lyase
CPQ91_07165	COG2318	DinB family
CPQ91_07170	COG2076	Multidrug Resistance protein
CPQ91_07175	COG2076	Multidrug Resistance protein
CPQ91_07180	COG0788	formyltetrahydrofolate deformylase activity
CPQ91_07185	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CPQ91_07190	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CPQ91_07195	COG1764	response to oxidative stress
CPQ91_07205	COG1846	Transcriptional regulator
CPQ91_07210	COG1764	response to oxidative stress
CPQ91_07220	COG0590	tRNA wobble adenosine to inosine editing
CPQ91_07225	COG0406	alpha-ribazole phosphatase activity
CPQ91_07240	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CPQ91_07245	COG1404	Belongs to the peptidase S8 family
CPQ91_07250	COG2239	Acts as a magnesium transporter
CPQ91_07260	COG0582	viral genome integration into host DNA
CPQ91_07265	COG2856	Zn peptidase
CPQ91_07280	COG3620	sequence-specific DNA binding
CPQ91_07295	COG3646	Phage regulatory protein
CPQ91_07295	COG3645	SOS response
CPQ91_07335	COG1484	DNA-dependent DNA replication
CPQ91_07360	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
CPQ91_07375	COG0629	single-stranded DNA binding
CPQ91_07420	COG3728	DNA packaging
CPQ91_07420	COG5484	DNA packaging
CPQ91_07425	COG1783	phage Terminase large subunit
CPQ91_07555	COG5444	nuclease activity
CPQ91_07570	COG0789	Transcriptional regulator
CPQ91_07585	COG1846	Transcriptional regulator
CPQ91_07590	COG1793	dna ligase
CPQ91_07590	COG3285	dna ligase
CPQ91_07595	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
CPQ91_07600	COG3300	MHYT domain
CPQ91_07600	COG5001	Diguanylate cyclase
CPQ91_07605	COG0586	Pfam SNARE associated Golgi protein
CPQ91_07610	COG0861	Integral membrane protein TerC family
CPQ91_07615	COG1191	sigma factor activity
CPQ91_07635	COG0501	Belongs to the peptidase M48B family
CPQ91_07640	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CPQ91_07645	COG0768	penicillin binding
CPQ91_07665	COG3594	Acyltransferase
CPQ91_07670	COG5002	protein histidine kinase activity
CPQ91_07675	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CPQ91_07680	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
CPQ91_07685	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
CPQ91_07690	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CPQ91_07695	COG0436	Aminotransferase
CPQ91_07700	COG1850	ribulose-bisphosphate carboxylase activity
CPQ91_07705	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
CPQ91_07705	COG0235	Class ii aldolase
CPQ91_07710	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
CPQ91_07715	COG0346	lactoylglutathione lyase activity
CPQ91_07720	COG3339	Conserved Protein
CPQ91_07730	COG3852	Histidine kinase
CPQ91_07735	COG1846	Transcriptional regulator
CPQ91_07740	COG1360	Flagellar Motor Protein
CPQ91_07745	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CPQ91_07750	COG0542	response to heat
CPQ91_07755	COG3949	Membrane
CPQ91_07760	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CPQ91_07765	COG0720	synthase
CPQ91_07770	COG0602	queuosine metabolic process
CPQ91_07775	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CPQ91_07785	COG3739	integral membrane protein
CPQ91_07790	COG3655	Transcriptional regulator
CPQ91_07820	COG4873	Protein conserved in bacteria
CPQ91_07830	COG3773	Cell wall hydrolase
CPQ91_07835	COG2244	polysaccharide biosynthetic process
CPQ91_07840	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CPQ91_07845	COG2217	Heavy metal translocating P-type atpase
CPQ91_07850	COG0006	proline dipeptidase activity
CPQ91_07860	COG1609	Transcriptional regulator
CPQ91_07865	COG3711	transcriptional antiterminator
CPQ91_07870	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CPQ91_07870	COG2190	(PTS) system
CPQ91_07870	COG1263	PTS System
CPQ91_07875	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPQ91_07880	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CPQ91_07890	COG1533	DNA photolyase activity
CPQ91_07895	COG0456	acetyltransferase
CPQ91_07900	COG0840	transmembrane signaling receptor activity
CPQ91_07905	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_07910	COG2084	Dehydrogenase
CPQ91_07915	COG2340	Cysteine-rich secretory protein family
CPQ91_07920	COG0768	penicillin binding
CPQ91_07925	COG4191	Histidine kinase
CPQ91_07930	COG0436	Aminotransferase
CPQ91_07935	COG1714	RDD family
CPQ91_07945	COG0835	chemotaxis
CPQ91_07945	COG0784	Response regulator, receiver
CPQ91_07955	COG2814	Major facilitator Superfamily
CPQ91_07960	COG1376	ErfK ybiS ycfS ynhG family protein
CPQ91_07970	COG1408	metallophosphoesterase
CPQ91_07975	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_07980	COG2200	EAL domain
CPQ91_07990	COG4703	Protein of unknown function (DUF1797)
CPQ91_08000	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
CPQ91_08010	COG0517	IMP dehydrogenase activity
CPQ91_08015	COG0583	DNA-binding transcription factor activity
CPQ91_08020	COG0716	FMN binding
CPQ91_08030	COG0716	FMN binding
CPQ91_08035	COG2171	N-acyltransferase activity
CPQ91_08040	COG1473	amidohydrolase
CPQ91_08050	COG0450	alkyl hydroperoxide reductase
CPQ91_08055	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CPQ91_08070	COG0746	molybdenum cofactor guanylyltransferase activity
CPQ91_08075	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CPQ91_08080	COG0303	'Molybdopterin
CPQ91_08085	COG1763	Mo-molybdopterin cofactor biosynthetic process
CPQ91_08090	COG0314	molybdopterin synthase activity
CPQ91_08095	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CPQ91_08105	COG1132	(ABC) transporter
CPQ91_08110	COG1132	(ABC) transporter
CPQ91_08120	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CPQ91_08125	COG0577	efflux transmembrane transporter activity
CPQ91_08130	COG1349	DNA-binding transcription factor activity
CPQ91_08135	COG1105	Belongs to the carbohydrate kinase PfkB family
CPQ91_08140	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPQ91_08140	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CPQ91_08140	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CPQ91_08160	COG0488	(ABC) transporter
CPQ91_08170	COG2309	aminopeptidase activity
CPQ91_08180	COG1077	Cell shape determining protein MreB Mrl
CPQ91_08185	COG2002	toxin-antitoxin pair type II binding
CPQ91_08190	COG3852	Histidine kinase
CPQ91_08195	COG0569	domain protein
CPQ91_08200	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
CPQ91_08205	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CPQ91_08215	COG0561	phosphatase activity
CPQ91_08220	COG0242	peptide deformylase activity
CPQ91_08230	COG0497	DNA recombination
CPQ91_08235	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CPQ91_08240	COG0022	dehydrogenase e1 component
CPQ91_08245	COG0508	dehydrogenase complex catalyzes the overall conversion of
CPQ91_08250	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CPQ91_08255	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CPQ91_08265	COG1982	Orn Lys Arg decarboxylase major
CPQ91_08270	COG4476	Belongs to the UPF0223 family
CPQ91_08275	COG4493	Belongs to the UPF0637 family
CPQ91_08285	COG0483	inositol monophosphate 1-phosphatase activity
CPQ91_08305	COG1595	DNA-templated transcription, initiation
CPQ91_08330	COG1846	Transcriptional regulator
CPQ91_08335	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CPQ91_08340	COG4896	Protein conserved in bacteria
CPQ91_08350	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CPQ91_08355	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CPQ91_08360	COG2066	Belongs to the glutaminase family
CPQ91_08365	COG4838	Belongs to the UPF0358 family
CPQ91_08370	COG0772	Belongs to the SEDS family
CPQ91_08375	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
CPQ91_08380	COG1612	heme a metabolic process
CPQ91_08385	COG0109	protoheme IX farnesyltransferase activity
CPQ91_08390	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CPQ91_08390	COG2010	Cytochrome c
CPQ91_08395	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CPQ91_08400	COG1845	cytochrome c oxidase, subunit III
CPQ91_08405	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CPQ91_08410	COG3336	cytochrome c oxidase
CPQ91_08420	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
CPQ91_08425	COG2340	Cysteine-rich secretory protein family
CPQ91_08440	COG3679	Belongs to the UPF0342 family
CPQ91_08445	COG4471	UPF0298 protein
CPQ91_08450	COG0742	ribosomal rna small subunit methyltransferase
CPQ91_08455	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CPQ91_08460	COG3314	Sporulation integral membrane protein YlbJ
CPQ91_08465	COG3480	Lon protease (S16) C-terminal proteolytic domain
CPQ91_08470	COG1323	Belongs to the UPF0348 family
CPQ91_08475	COG1399	metal-binding, possibly nucleic acid-binding protein
CPQ91_08480	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CPQ91_08490	COG0454	-acetyltransferase
CPQ91_08495	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CPQ91_08500	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
CPQ91_08505	COG2001	Belongs to the MraZ family
CPQ91_08510	COG0275	rRNA processing
CPQ91_08515	COG4839	cell division protein FtsL
CPQ91_08525	COG0768	penicillin binding
CPQ91_08530	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CPQ91_08535	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CPQ91_08540	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CPQ91_08545	COG0772	Belongs to the SEDS family
CPQ91_08550	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CPQ91_08555	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CPQ91_08560	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CPQ91_08565	COG3879	Bacterial protein of unknown function (DUF881)
CPQ91_08570	COG3879	Bacterial protein of unknown function (DUF881)
CPQ91_08575	COG3856	small basic protein
CPQ91_08580	COG0849	cell division
CPQ91_08585	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CPQ91_08590	COG4412	M6 family metalloprotease domain protein
CPQ91_08590	COG1404	Belongs to the peptidase S8 family
CPQ91_08595	COG1404	Belongs to the peptidase S8 family
CPQ91_08595	COG4412	M6 family metalloprotease domain protein
CPQ91_08605	COG1191	sigma factor activity
CPQ91_08610	COG1191	sigma factor activity
CPQ91_08615	COG1119	ATPase activity
CPQ91_08620	COG0500	methyltransferase
CPQ91_08625	COG1873	PFAM PRC-barrel domain
CPQ91_08635	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CPQ91_08640	COG1799	cell septum assembly
CPQ91_08645	COG0762	integral membrane protein
CPQ91_08650	COG2302	S4 RNA-binding domain
CPQ91_08655	COG3599	regulation of cell shape
CPQ91_08660	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CPQ91_08665	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CPQ91_08670	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CPQ91_08675	COG0564	pseudouridine synthase activity
CPQ91_08680	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CPQ91_08685	COG2233	PERMEase
CPQ91_08690	COG0540	Belongs to the ATCase OTCase family
CPQ91_08695	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CPQ91_08700	COG0505	Belongs to the CarA family
CPQ91_08705	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CPQ91_08710	COG0543	2 iron, 2 sulfur cluster binding
CPQ91_08715	COG0167	dihydroorotate dehydrogenase activity
CPQ91_08720	COG0284	orotidine-5'-phosphate decarboxylase activity
CPQ91_08725	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CPQ91_08735	COG0175	sulfate reduction
CPQ91_08740	COG0306	phosphate transporter
CPQ91_08745	COG2046	Belongs to the sulfate adenylyltransferase family
CPQ91_08750	COG0529	Catalyzes the synthesis of activated sulfate
CPQ91_08755	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CPQ91_08760	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
CPQ91_08765	COG1648	precorrin-2 dehydrogenase activity
CPQ91_08775	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CPQ91_08780	COG1561	YicC-like family, N-terminal region
CPQ91_08785	COG2052	Domain of unknown function (DUF370)
CPQ91_08790	COG0194	GDP metabolic process
CPQ91_08795	COG1758	RNA polymerase activity
CPQ91_08800	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CPQ91_08805	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CPQ91_08810	COG0242	peptide deformylase activity
CPQ91_08815	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CPQ91_08820	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CPQ91_08820	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CPQ91_08825	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CPQ91_08830	COG0631	protein serine/threonine phosphatase activity
CPQ91_08835	COG2815	serine threonine protein kinase
CPQ91_08835	COG0515	serine threonine protein kinase
CPQ91_08840	COG1162	GTPase activity
CPQ91_08845	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CPQ91_08850	COG1564	THIamine pyrophosphokinase
CPQ91_08860	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CPQ91_08865	COG1302	Protein conserved in bacteria
CPQ91_08870	COG1461	Dihydroxyacetone kinase
CPQ91_08875	COG1760	l-serine dehydratase
CPQ91_08880	COG1760	l-serine dehydratase
CPQ91_08885	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CPQ91_08890	COG1349	DNA-binding transcription factor activity
CPQ91_08895	COG0416	fatty acid biosynthetic process
CPQ91_08900	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CPQ91_08905	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_08910	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CPQ91_08915	COG0571	ribonuclease III activity
CPQ91_08920	COG1196	nuclear chromosome segregation
CPQ91_08925	COG0552	protein localization to endoplasmic reticulum
CPQ91_08930	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
CPQ91_08935	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CPQ91_08940	COG0228	four-way junction DNA binding
CPQ91_08945	COG1837	Belongs to the UPF0109 family
CPQ91_08955	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CPQ91_08960	COG0336	Belongs to the RNA methyltransferase TrmD family
CPQ91_08965	COG0335	large ribosomal subunit rRNA binding
CPQ91_08970	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CPQ91_08975	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CPQ91_08985	COG2257	FlhB HrpN YscU SpaS Family
CPQ91_08990	COG0045	succinate-CoA ligase (ADP-forming) activity
CPQ91_08995	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CPQ91_09000	COG0758	DNA mediated transformation
CPQ91_09005	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CPQ91_09010	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
CPQ91_09015	COG4974	Belongs to the 'phage' integrase family
CPQ91_09020	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CPQ91_09025	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CPQ91_09030	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
CPQ91_09035	COG1815	bacterial-type flagellum-dependent cell motility
CPQ91_09040	COG1558	bacterial-type flagellum-dependent cell motility
CPQ91_09045	COG1677	Flagellar hook-basal body complex protein FliE
CPQ91_09050	COG1766	The M ring may be actively involved in energy transduction
CPQ91_09055	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CPQ91_09060	COG1317	bacterial-type flagellum organization
CPQ91_09065	COG1157	protein secretion by the type III secretion system
CPQ91_09070	COG2882	bacterial-type flagellum organization
CPQ91_09080	COG3144	bacterial-type flagellum assembly
CPQ91_09085	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CPQ91_09090	COG4786	Flagellar basal body rod
CPQ91_09095	COG1582	Flagellar protein (FlbD)
CPQ91_09100	COG1580	Controls the rotational direction of flagella during chemotaxis
CPQ91_09105	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CPQ91_09110	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CPQ91_09110	COG1776	CheC inhibitor of MCP methylation
CPQ91_09115	COG2201	protein-glutamate methylesterase activity
CPQ91_09120	COG3190	flagellar
CPQ91_09125	COG1338	Plays a role in the flagellum-specific transport system
CPQ91_09130	COG1987	bacterial-type flagellum assembly
CPQ91_09135	COG1684	flagellar biosynthetic protein fliR
CPQ91_09140	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CPQ91_09145	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CPQ91_09150	COG1419	protein localization to endoplasmic reticulum
CPQ91_09155	COG0455	bacterial-type flagellum organization
CPQ91_09160	COG2201	protein-glutamate methylesterase activity
CPQ91_09165	COG2198	Histidine kinase
CPQ91_09165	COG0643	Histidine kinase
CPQ91_09170	COG0835	chemotaxis
CPQ91_09175	COG1776	CheC inhibitor of MCP methylation
CPQ91_09180	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
CPQ91_09195	COG0052	Belongs to the universal ribosomal protein uS2 family
CPQ91_09200	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CPQ91_09205	COG0528	UMP kinase activity
CPQ91_09210	COG0233	cytoplasmic translational termination
CPQ91_09215	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CPQ91_09220	COG4589	Belongs to the CDS family
CPQ91_09225	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CPQ91_09230	COG0750	zinc metalloprotease
CPQ91_09235	COG0442	prolyl-tRNA aminoacylation
CPQ91_09240	COG2176	DNA-directed DNA polymerase activity
CPQ91_09270	COG0779	Required for maturation of 30S ribosomal subunits
CPQ91_09275	COG0195	Participates in both transcription termination and antitermination
CPQ91_09280	COG2740	Nucleic-acid-binding protein implicated in transcription termination
CPQ91_09285	COG1358	cellular component organization or biogenesis
CPQ91_09290	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CPQ91_09295	COG1550	Protein conserved in bacteria
CPQ91_09300	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CPQ91_09305	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CPQ91_09310	COG0196	riboflavin kinase activity
CPQ91_09315	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CPQ91_09320	COG1185	polyribonucleotide nucleotidyltransferase activity
CPQ91_09325	COG0726	polysaccharide deacetylase
CPQ91_09330	COG0612	Peptidase, M16
CPQ91_09335	COG1873	PFAM PRC-barrel domain
CPQ91_09340	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CPQ91_09345	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CPQ91_09350	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CPQ91_09355	COG0527	aspartate kinase activity
CPQ91_09365	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CPQ91_09370	COG0740	serine-type endopeptidase activity
CPQ91_09380	COG4980	gas vesicle protein
CPQ91_09380	COG1674	ftsk spoiiie
CPQ91_09385	COG2188	Transcriptional regulator
CPQ91_09390	COG2814	Major facilitator Superfamily
CPQ91_09395	COG0612	Peptidase, M16
CPQ91_09400	COG0612	Peptidase, M16
CPQ91_09405	COG0300	oxidoreductase activity
CPQ91_09420	COG1426	Protein conserved in bacteria
CPQ91_09425	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CPQ91_09430	COG1546	Belongs to the CinA family
CPQ91_09430	COG1058	Belongs to the CinA family
CPQ91_09435	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CPQ91_09440	COG1418	mRNA catabolic process
CPQ91_09445	COG1692	metallophosphoesterase
CPQ91_09450	COG2359	stage V sporulation protein S
CPQ91_09460	COG1063	alcohol dehydrogenase
CPQ91_09465	COG0156	8-amino-7-oxononanoate synthase activity
CPQ91_09470	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CPQ91_09475	COG4550	Control of competence regulator ComK, YlbF/YmcA
CPQ91_09485	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CPQ91_09490	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CPQ91_09495	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CPQ91_09500	COG5444	nuclease activity
CPQ91_09520	COG0523	cobalamin synthesis protein
CPQ91_09530	COG1247	-acetyltransferase
CPQ91_09545	COG1231	oxidoreductase activity
CPQ91_09550	COG3619	membrane
CPQ91_09555	COG3263	regulation of cellular component size
CPQ91_09565	COG2267	carboxylic ester hydrolase activity
CPQ91_09570	COG2267	carboxylic ester hydrolase activity
CPQ91_09575	COG0393	Putative heavy-metal-binding
CPQ91_09580	COG0398	Pfam SNARE associated Golgi protein
CPQ91_09585	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CPQ91_09590	COG1819	glycosyl
CPQ91_09595	COG0531	amino acid
CPQ91_09600	COG5577	PFAM Coat F domain
CPQ91_09610	COG3858	chitin binding
CPQ91_09610	COG1388	LysM domain
CPQ91_09615	COG1309	transcriptional regulator
CPQ91_09620	COG3631	Ketosteroid isomerase-related protein
CPQ91_09625	COG0702	epimerase
CPQ91_09635	COG1764	response to oxidative stress
CPQ91_09640	COG2076	Multidrug Resistance protein
CPQ91_09645	COG2076	Multidrug Resistance protein
CPQ91_09660	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CPQ91_09665	COG1923	regulation of RNA biosynthetic process
CPQ91_09680	COG1780	Probably involved in ribonucleotide reductase function
CPQ91_09685	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CPQ91_09690	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CPQ91_09695	COG4112	unkown
CPQ91_09710	COG0735	belongs to the Fur family
CPQ91_09715	COG1802	Transcriptional regulator
CPQ91_09720	COG0697	spore germination
CPQ91_09755	COG1309	transcriptional regulator
CPQ91_09805	COG0464	growth
CPQ91_09810	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CPQ91_09815	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
CPQ91_09820	COG0789	Transcriptional regulator
CPQ91_09825	COG0174	glutamine synthetase
CPQ91_09870	COG1073	alpha beta
CPQ91_09910	COG1309	transcriptional regulator
CPQ91_09915	COG2076	Multidrug Resistance protein
CPQ91_09920	COG2076	Multidrug Resistance protein
CPQ91_09925	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CPQ91_09940	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CPQ91_09945	COG3546	catalase activity
CPQ91_09970	COG1846	Transcriptional regulator
CPQ91_09975	COG0778	Nitroreductase
CPQ91_09980	COG0346	lactoylglutathione lyase activity
CPQ91_09985	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CPQ91_09990	COG0655	NAD(P)H dehydrogenase (quinone) activity
CPQ91_10005	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CPQ91_10010	COG3209	COG3209 Rhs family protein
CPQ91_10015	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CPQ91_10020	COG1388	LysM domain
CPQ91_10025	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CPQ91_10030	COG4224	UPF0291 protein
CPQ91_10035	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CPQ91_10045	COG3763	UPF0154 protein
CPQ91_10055	COG0785	Cytochrome C biogenesis protein
CPQ91_10060	COG2201	protein-glutamate methylesterase activity
CPQ91_10065	COG4846	Membrane protein involved in cytochrome C biogenesis
CPQ91_10075	COG0071	Belongs to the small heat shock protein (HSP20) family
CPQ91_10090	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CPQ91_10095	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CPQ91_10115	COG0824	Thioesterase
CPQ91_10140	COG4841	protein insertion into membrane
CPQ91_10145	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CPQ91_10150	COG1832	CoA-binding protein
CPQ91_10155	COG0187	DNA topoisomerase II activity
CPQ91_10160	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CPQ91_10165	COG1609	Transcriptional regulator
CPQ91_10180	COG2160	L-arabinose isomerase activity
CPQ91_10200	COG1115	amino acid carrier protein
CPQ91_10210	COG2181	nitrate reductase activity
CPQ91_10215	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CPQ91_10220	COG1140	nitrate reductase beta subunit
CPQ91_10225	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CPQ91_10245	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CPQ91_10255	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CPQ91_10260	COG2223	nitrite transmembrane transporter activity
CPQ91_10270	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CPQ91_10280	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
CPQ91_10290	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
CPQ91_10300	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CPQ91_10310	COG0492	ferredoxin-NADP+ reductase activity
CPQ91_10325	COG3420	alginic acid biosynthetic process
CPQ91_10330	COG1114	Component of the transport system for branched-chain amino acids
CPQ91_10340	COG0789	Transcriptional regulator
CPQ91_10365	COG1024	Enoyl-CoA hydratase
CPQ91_10370	COG1012	belongs to the aldehyde dehydrogenase family
CPQ91_10375	COG2084	Dehydrogenase
CPQ91_10380	COG1960	acyl-CoA dehydrogenase activity
CPQ91_10385	COG1482	cell wall glycoprotein biosynthetic process
CPQ91_10390	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CPQ91_10390	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPQ91_10390	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CPQ91_10410	COG3711	transcriptional antiterminator
CPQ91_10410	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPQ91_10425	COG1725	Transcriptional regulator
CPQ91_10430	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_10435	COG1312	Catalyzes the dehydration of D-mannonate
CPQ91_10450	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
CPQ91_10460	COG1609	Transcriptional regulator
CPQ91_10465	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CPQ91_10470	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CPQ91_10475	COG0640	Transcriptional regulator
CPQ91_10485	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
CPQ91_10500	COG1649	PFAM Uncharacterised BCR, COG1649
CPQ91_10510	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CPQ91_10520	COG2027	D-alanyl-D-alanine carboxypeptidase
CPQ91_10525	COG2323	membrane
CPQ91_10530	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CPQ91_10540	COG2323	membrane
CPQ91_10555	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CPQ91_10580	COG3546	catalase activity
CPQ91_10600	COG0860	N-Acetylmuramoyl-L-alanine amidase
CPQ91_10620	COG1252	NADH dehydrogenase
CPQ91_10635	COG0166	Belongs to the GPI family
CPQ91_10645	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CPQ91_10650	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CPQ91_10655	COG1024	Enoyl-CoA hydratase
CPQ91_10660	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CPQ91_10665	COG0511	ligase activity, forming carbon-carbon bonds
CPQ91_10670	COG0439	Biotin carboxylase
CPQ91_10675	COG0318	PFAM AMP-dependent synthetase and ligase
CPQ91_10680	COG1960	acyl-CoA dehydrogenase activity
CPQ91_10685	COG2249	NAD(P)H dehydrogenase (quinone) activity
CPQ91_10690	COG1733	regulation of RNA biosynthetic process
CPQ91_10695	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CPQ91_10700	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CPQ91_10710	COG2323	membrane
CPQ91_10715	COG0306	phosphate transporter
CPQ91_10720	COG0175	sulfate reduction
CPQ91_10725	COG1809	phosphosulfolactate synthase activity
CPQ91_10730	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CPQ91_10740	COG2814	Major facilitator Superfamily
CPQ91_10745	COG0463	Glycosyl transferase, family 2
CPQ91_10760	COG0493	'glutamate synthase
CPQ91_10765	COG0067	glutamate synthase
CPQ91_10765	COG0070	glutamate synthase
CPQ91_10765	COG0069	glutamate synthase activity
CPQ91_10770	COG0583	DNA-binding transcription factor activity
CPQ91_10790	COG1846	Transcriptional regulator
CPQ91_10800	COG1132	(ABC) transporter
CPQ91_10810	COG0300	oxidoreductase activity
CPQ91_10825	COG0477	Major facilitator Superfamily
CPQ91_10830	COG0243	molybdopterin cofactor binding
CPQ91_10835	COG1846	Transcriptional regulator
CPQ91_10840	COG2814	Major facilitator Superfamily
CPQ91_10845	COG0531	amino acid
CPQ91_10855	COG0531	amino acid
CPQ91_10860	COG0531	amino acid
CPQ91_10865	COG0697	spore germination
CPQ91_10880	COG0840	transmembrane signaling receptor activity
CPQ91_10885	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CPQ91_10890	COG1404	Belongs to the peptidase S8 family
CPQ91_10900	COG1309	transcriptional regulator
CPQ91_10905	COG1846	Transcriptional regulator
CPQ91_10935	COG1309	transcriptional regulator
CPQ91_10940	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CPQ91_10945	COG3708	Transcriptional regulator
CPQ91_10955	COG2378	regulation of single-species biofilm formation
CPQ91_10965	COG0640	Transcriptional regulator
CPQ91_10970	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CPQ91_10980	COG0531	amino acid
CPQ91_10985	COG0741	lytic transglycosylase activity
CPQ91_10990	COG1086	Polysaccharide biosynthesis protein
CPQ91_11010	COG2322	membrane
CPQ91_11025	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CPQ91_11030	COG1388	LysM domain
CPQ91_11030	COG3584	3D domain protein
CPQ91_11035	COG0514	ATP-dependent DNA helicase (RecQ)
CPQ91_11055	COG2315	Protein conserved in bacteria
CPQ91_11075	COG2427	Protein of unknown function (DUF1641)
CPQ91_11080	COG3383	formate dehydrogenase (NAD+) activity
CPQ91_11105	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
CPQ91_11150	COG0402	S-adenosylhomocysteine deaminase activity
CPQ91_11165	COG2267	carboxylic ester hydrolase activity
CPQ91_11180	COG1280	lysine exporter protein (LysE YggA)
CPQ91_11185	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CPQ91_11195	COG0574	Belongs to the PEP-utilizing enzyme family
CPQ91_11195	COG3848	Pyruvate phosphate dikinase
CPQ91_11200	COG1309	transcriptional regulator
CPQ91_11215	COG2318	DinB family
CPQ91_11220	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CPQ91_11225	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CPQ91_11240	COG1012	belongs to the aldehyde dehydrogenase family
CPQ91_11245	COG2814	Major facilitator Superfamily
CPQ91_11260	COG1657	PFAM Prenyltransferase squalene oxidase
CPQ91_11265	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CPQ91_11275	COG0733	neurotransmitter:sodium symporter activity
CPQ91_11280	COG0385	Bile acid
CPQ91_11285	COG0508	dehydrogenase complex catalyzes the overall conversion of
CPQ91_11290	COG0567	Dehydrogenase, E1 component
CPQ91_11295	COG4548	von Willebrand factor, type A
CPQ91_11300	COG0714	Associated with various cellular activities
CPQ91_11305	COG2032	superoxide dismutase activity
CPQ91_11310	COG1388	LysM domain
CPQ91_11310	COG0791	NLP P60 protein
CPQ91_11320	COG0534	Mate efflux family protein
CPQ91_11325	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CPQ91_11330	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CPQ91_11340	COG2962	Rard protein
CPQ91_11350	COG4305	rare lipoprotein A
CPQ91_11360	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_11365	COG1733	regulation of RNA biosynthetic process
CPQ91_11370	COG0778	Nitroreductase
CPQ91_11375	COG0400	carboxylic ester hydrolase activity
CPQ91_11385	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CPQ91_11390	COG3409	Peptidoglycan-binding domain 1 protein
CPQ91_11390	COG0793	Belongs to the peptidase S41A family
CPQ91_11395	COG2226	methyltransferase
CPQ91_11405	COG1876	peptidase activity
CPQ91_11410	COG0813	purine-nucleoside phosphorylase activity
CPQ91_11415	COG0701	Predicted permease
CPQ91_11435	COG0671	phosphoesterase, PA-phosphatase related
CPQ91_11455	COG4479	Belongs to the UPF0346 family
CPQ91_11465	COG1509	lysine 2,3-aminomutase activity
CPQ91_11470	COG0456	acetyltransferase
CPQ91_11475	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CPQ91_11480	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CPQ91_11485	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CPQ91_11490	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CPQ91_11505	COG0456	acetyltransferase
CPQ91_11510	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CPQ91_11515	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CPQ91_11520	COG1846	Transcriptional regulator
CPQ91_11530	COG3706	GGDEF domain
CPQ91_11550	COG4698	Protein conserved in bacteria
CPQ91_11555	COG2755	lipolytic protein G-D-S-L family
CPQ91_11560	COG1999	signal sequence binding
CPQ91_11575	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CPQ91_11580	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CPQ91_11585	COG1272	protein, Hemolysin III
CPQ91_11590	COG0204	Acyl-transferase
CPQ91_11595	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CPQ91_11605	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CPQ91_11620	COG2136	Putative SAM-dependent methyltransferase
CPQ91_11620	COG2521	methyltransferase
CPQ91_11630	COG0129	dihydroxy-acid dehydratase activity
CPQ91_11635	COG1413	lyase activity
CPQ91_11640	COG1418	mRNA catabolic process
CPQ91_11645	COG0386	Belongs to the glutathione peroxidase family
CPQ91_11650	COG2759	Belongs to the formate--tetrahydrofolate ligase family
CPQ91_11655	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
CPQ91_11660	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CPQ91_11670	COG1278	Cold shock
CPQ91_11690	COG0328	RNA-DNA hybrid ribonuclease activity
CPQ91_11695	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CPQ91_11700	COG0328	RNA-DNA hybrid ribonuclease activity
CPQ91_11710	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CPQ91_11725	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CPQ91_11735	COG1755	Isoprenylcysteine carboxyl methyltransferase
CPQ91_11740	COG3424	synthase
CPQ91_11745	COG0456	acetyltransferase
CPQ91_11750	COG2233	PERMEase
CPQ91_11755	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CPQ91_11760	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CPQ91_11765	COG1199	ATP-dependent helicase activity
CPQ91_11780	COG0116	Belongs to the methyltransferase superfamily
CPQ91_11790	COG3599	regulation of cell shape
CPQ91_11795	COG4474	Belongs to the UPF0398 family
CPQ91_11805	COG3359	exonuclease
CPQ91_11810	COG1111	helicase
CPQ91_11810	COG1205	dead DEAH box helicase
CPQ91_11815	COG2190	(PTS) system
CPQ91_11820	COG0071	Belongs to the small heat shock protein (HSP20) family
CPQ91_11855	COG3331	DNA recombination
CPQ91_11860	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CPQ91_11860	COG4499	WXG100 protein secretion system (Wss), protein YukC
CPQ91_11870	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CPQ91_11875	COG3935	DnaD domain protein
CPQ91_11880	COG0017	Asparaginyl-tRNA synthetase
CPQ91_11885	COG0436	Aminotransferase
CPQ91_11890	COG5353	protein conserved in bacteria
CPQ91_11900	COG1199	ATP-dependent helicase activity
CPQ91_11900	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CPQ91_11905	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
CPQ91_11910	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CPQ91_11915	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
CPQ91_11930	COG0617	tRNA 3'-terminal CCA addition
CPQ91_11935	COG0438	transferase activity, transferring glycosyl groups
CPQ91_11940	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CPQ91_11945	COG1803	Methylglyoxal synthase
CPQ91_11950	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CPQ91_11955	COG1694	Mazg nucleotide pyrophosphohydrolase
CPQ91_11960	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CPQ91_11970	COG4347	Protein of unknown function (DUF1405)
CPQ91_11975	COG2010	Cytochrome c
CPQ91_11975	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CPQ91_11980	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CPQ91_11985	COG0723	plastoquinol--plastocyanin reductase activity
CPQ91_11995	COG5582	Belongs to the UPF0302 family
CPQ91_12000	COG0457	Tetratricopeptide repeat
CPQ91_12005	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CPQ91_12010	COG0287	Prephenate dehydrogenase
CPQ91_12015	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CPQ91_12020	COG0159	tryptophan synthase activity
CPQ91_12025	COG0133	tryptophan synthase activity
CPQ91_12030	COG0135	phosphoribosylanthranilate isomerase activity
CPQ91_12035	COG0134	indole-3-glycerol-phosphate synthase activity
CPQ91_12040	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CPQ91_12045	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CPQ91_12050	COG4401	Chorismate mutase type I
CPQ91_12055	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CPQ91_12060	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CPQ91_12065	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CPQ91_12070	COG0105	UTP biosynthetic process
CPQ91_12075	COG0142	geranyltranstransferase activity
CPQ91_12080	COG2226	methyltransferase
CPQ91_12085	COG0142	geranyltranstransferase activity
CPQ91_12100	COG0776	regulation of translation
CPQ91_12105	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CPQ91_12125	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CPQ91_12130	COG1160	GTP binding
CPQ91_12155	COG1304	FMN binding
CPQ91_12160	COG0539	negative regulation of cytoplasmic translation
CPQ91_12165	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
CPQ91_12175	COG2959	enzyme of heme biosynthesis
CPQ91_12180	COG3773	Cell wall hydrolase
CPQ91_12180	COG3409	Peptidoglycan-binding domain 1 protein
CPQ91_12185	COG2339	peptidase activity
CPQ91_12195	COG0492	ferredoxin-NADP+ reductase activity
CPQ91_12200	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CPQ91_12205	COG4862	establishment of competence for transformation
CPQ91_12210	COG1408	metallophosphoesterase
CPQ91_12220	COG1388	LysM domain
CPQ91_12225	COG1266	CAAX protease self-immunity
CPQ91_12230	COG0514	ATP-dependent DNA helicase (RecQ)
CPQ91_12235	COG4955	Helix-turn-helix domain
CPQ91_12240	COG1141	Ferredoxin
CPQ91_12245	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CPQ91_12250	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CPQ91_12255	COG0739	heme binding
CPQ91_12265	COG1595	DNA-templated transcription, initiation
CPQ91_12285	COG5002	protein histidine kinase activity
CPQ91_12290	COG0745	RESPONSE REGULATOR receiver
CPQ91_12295	COG5002	protein histidine kinase activity
CPQ91_12300	COG0745	RESPONSE REGULATOR receiver
CPQ91_12305	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CPQ91_12310	COG1333	cytochrome c biogenesis protein
CPQ91_12315	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CPQ91_12320	COG1187	pseudouridine synthase activity
CPQ91_12325	COG0700	Nucleoside recognition
CPQ91_12330	COG2715	membrane protein required for spore maturation
CPQ91_12335	COG1686	Belongs to the peptidase S11 family
CPQ91_12345	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CPQ91_12350	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CPQ91_12360	COG1547	Domain of unknown function (DUF309)
CPQ91_12365	COG0456	acetyltransferase
CPQ91_12370	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CPQ91_12375	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CPQ91_12375	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CPQ91_12380	COG0307	riboflavin synthase, alpha
CPQ91_12385	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CPQ91_12385	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CPQ91_12410	COG0457	Tetratricopeptide repeat
CPQ91_12415	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CPQ91_12420	COG4086	secreted protein
CPQ91_12425	COG4195	phage-related replication protein
CPQ91_12430	COG0019	diaminopimelate decarboxylase activity
CPQ91_12440	COG0697	spore germination
CPQ91_12490	COG1686	Belongs to the peptidase S11 family
CPQ91_12495	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
CPQ91_12500	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
CPQ91_12505	COG4974	Belongs to the 'phage' integrase family
CPQ91_12515	COG0735	belongs to the Fur family
CPQ91_12520	COG1300	Membrane
CPQ91_12525	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CPQ91_12545	COG2153	protein acetylation
CPQ91_12550	COG1379	DNA repair
CPQ91_12555	COG0494	nUDIX hydrolase
CPQ91_12565	COG1309	transcriptional regulator
CPQ91_12575	COG0667	Aldo Keto reductase
CPQ91_12585	COG1073	alpha beta
CPQ91_12595	COG4918	Iron-sulphur cluster biosynthesis
CPQ91_12610	COG2329	Antibiotic biosynthesis monooxygenase
CPQ91_12620	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
CPQ91_12630	COG0747	negative chemotaxis
CPQ91_12635	COG0601	transmembrane transport
CPQ91_12645	COG0444	Belongs to the ABC transporter superfamily
CPQ91_12650	COG0534	Mate efflux family protein
CPQ91_12665	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CPQ91_12675	COG2211	Major facilitator Superfamily
CPQ91_12680	COG0346	lactoylglutathione lyase activity
CPQ91_12685	COG1072	(Pantothenic acid kinase))
CPQ91_12720	COG4195	phage-related replication protein
CPQ91_12730	COG0300	oxidoreductase activity
CPQ91_12735	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CPQ91_12740	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CPQ91_12745	COG4187	Peptidase family M20/M25/M40
CPQ91_12750	COG1902	pentaerythritol trinitrate reductase activity
CPQ91_12755	COG0596	Alpha beta hydrolase
CPQ91_12760	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CPQ91_12765	COG1234	tRNA 3'-trailer cleavage
CPQ91_12770	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CPQ91_12790	COG2188	Transcriptional regulator
CPQ91_12795	COG2723	6-phospho-beta-galactosidase activity
CPQ91_12800	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CPQ91_12805	COG1447	Phosphotransferase system cellobiose-specific component IIA
CPQ91_12810	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CPQ91_12815	COG1785	Belongs to the alkaline phosphatase family
CPQ91_12820	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_12825	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CPQ91_12830	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CPQ91_12840	COG0706	membrane insertase activity
CPQ91_12845	COG2195	Cleaves the N-terminal amino acid of tripeptides
CPQ91_12850	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CPQ91_12855	COG4129	membrane
CPQ91_12860	COG1126	abc transporter atp-binding protein
CPQ91_12865	COG0765	amino acid transport
CPQ91_12870	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CPQ91_12880	COG1597	lipid kinase activity
CPQ91_12885	COG0508	dehydrogenase complex catalyzes the overall conversion of
CPQ91_12890	COG0022	dehydrogenase e1 component
CPQ91_12895	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CPQ91_12900	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CPQ91_12905	COG3426	butyrate kinase activity
CPQ91_12915	COG0280	phosphate acetyltransferase
CPQ91_12920	COG3829	transcription factor binding
CPQ91_12920	COG3290	protein histidine kinase activity
CPQ91_12930	COG0584	glycerophosphoryl diester phosphodiesterase
CPQ91_12935	COG0860	N-Acetylmuramoyl-L-alanine amidase
CPQ91_12955	COG1045	serine acetyltransferase
CPQ91_12965	COG0745	RESPONSE REGULATOR receiver
CPQ91_12970	COG0750	zinc metalloprotease
CPQ91_12975	COG0497	DNA recombination
CPQ91_12980	COG1438	arginine binding
CPQ91_12985	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
CPQ91_12990	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CPQ91_12995	COG0142	geranyltranstransferase activity
CPQ91_13000	COG1722	exodeoxyribonuclease VII activity
CPQ91_13005	COG1570	exodeoxyribonuclease VII activity
CPQ91_13010	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CPQ91_13015	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CPQ91_13020	COG1302	Protein conserved in bacteria
CPQ91_13025	COG0439	Biotin carboxylase
CPQ91_13030	COG0511	ligase activity, forming carbon-carbon bonds
CPQ91_13070	COG3854	ATPases associated with a variety of cellular activities
CPQ91_13080	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CPQ91_13085	COG0006	proline dipeptidase activity
CPQ91_13090	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CPQ91_13100	COG3872	metal-dependent enzyme
CPQ91_13110	COG1752	Esterase of the alpha-beta hydrolase superfamily
CPQ91_13115	COG1321	iron dependent repressor
CPQ91_13120	COG0095	Lipoate-protein ligase
CPQ91_13125	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CPQ91_13130	COG2113	Glycine betaine
CPQ91_13135	COG4176	ABC-type proline glycine betaine transport system permease component
CPQ91_13140	COG4175	Glycine betaine
CPQ91_13140	COG0517	IMP dehydrogenase activity
CPQ91_13145	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CPQ91_13150	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CPQ91_13155	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CPQ91_13160	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CPQ91_13185	COG0681	Belongs to the peptidase S26 family
CPQ91_13210	COG4940	Competence protein ComGF
CPQ91_13220	COG4970	Tfp pilus assembly protein FimT
CPQ91_13225	COG4537	Required for transformation and DNA binding
CPQ91_13230	COG1459	type II secretion system
CPQ91_13235	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CPQ91_13240	COG1366	Belongs to the anti-sigma-factor antagonist family
CPQ91_13250	COG1393	Belongs to the ArsC family
CPQ91_13265	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CPQ91_13275	COG0011	TIGRFAM Protein of
CPQ91_13285	COG2866	Carboxypeptidase
CPQ91_13290	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CPQ91_13295	COG1368	sulfuric ester hydrolase activity
CPQ91_13300	COG1940	carbohydrate kinase activity
CPQ91_13305	COG4483	Protein conserved in bacteria
CPQ91_13310	COG0697	spore germination
CPQ91_13315	COG0705	Rhomboid family
CPQ91_13315	COG0457	Tetratricopeptide repeat
CPQ91_13325	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CPQ91_13330	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CPQ91_13335	COG0438	transferase activity, transferring glycosyl groups
CPQ91_13350	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CPQ91_13355	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CPQ91_13360	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CPQ91_13365	COG0581	inorganic phosphate transmembrane transporter activity
CPQ91_13370	COG0573	inorganic phosphate transmembrane transporter activity
CPQ91_13375	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CPQ91_13385	COG0477	Major facilitator Superfamily
CPQ91_13390	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CPQ91_13395	COG2839	Protein conserved in bacteria
CPQ91_13400	COG5521	maltodextrose utilization protein MalA
CPQ91_13405	COG1388	LysM domain
CPQ91_13410	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CPQ91_13415	COG4709	membrane
CPQ91_13420	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
CPQ91_13425	COG0735	belongs to the Fur family
CPQ91_13430	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CPQ91_13435	COG1121	(ABC) transporter
CPQ91_13440	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CPQ91_13450	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
CPQ91_13455	COG0513	Belongs to the DEAD box helicase family
CPQ91_13465	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CPQ91_13470	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CPQ91_13475	COG2384	SAM-dependent methyltransferase
CPQ91_13525	COG5444	nuclease activity
CPQ91_13540	COG2010	Cytochrome c
CPQ91_13545	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CPQ91_13550	COG0358	DNA primase activity
CPQ91_13555	COG1671	Belongs to the UPF0178 family
CPQ91_13560	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CPQ91_13565	COG0517	IMP dehydrogenase activity
CPQ91_13570	COG0751	glycine-tRNA ligase activity
CPQ91_13575	COG0752	glycyl-tRNA synthetase alpha subunit
CPQ91_13580	COG1381	Involved in DNA repair and RecF pathway recombination
CPQ91_13590	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CPQ91_13595	COG0295	cytidine deaminase activity
CPQ91_13600	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CPQ91_13605	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CPQ91_13610	COG1480	7TM receptor with intracellular HD hydrolase
CPQ91_13615	COG1702	phosphate starvation-inducible protein PhoH
CPQ91_13620	COG0561	phosphatase activity
CPQ91_13635	COG4864	UPF0365 protein
CPQ91_13640	COG1030	water channel activity
CPQ91_13645	COG1610	YqeY-like protein
CPQ91_13650	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CPQ91_13655	COG1283	sodium-dependent phosphate transmembrane transporter activity
CPQ91_13660	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CPQ91_13665	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CPQ91_13670	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CPQ91_13675	COG2264	protein methyltransferase activity
CPQ91_13680	COG0484	heat shock protein binding
CPQ91_13685	COG0443	Heat shock 70 kDa protein
CPQ91_13690	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CPQ91_13695	COG1420	regulation of RNA biosynthetic process
CPQ91_13700	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CPQ91_13705	COG0481	GTPase activity
CPQ91_13715	COG0860	N-Acetylmuramoyl-L-alanine amidase
CPQ91_13720	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
CPQ91_13725	COG0268	Binds directly to 16S ribosomal RNA
CPQ91_13730	COG1466	dna polymerase III delta subunit
CPQ91_13740	COG2333	competence protein COMEC
CPQ91_13740	COG0658	competence protein
CPQ91_13745	COG2131	deaminase
CPQ91_13750	COG1596	polysaccharide export
CPQ91_13750	COG1555	photosystem II stabilization
CPQ91_13755	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CPQ91_13760	COG2226	methyltransferase
CPQ91_13765	COG0799	negative regulation of ribosome biogenesis
CPQ91_13770	COG1713	HD superfamily hydrolase involved in NAD metabolism
CPQ91_13775	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CPQ91_13780	COG1534	Rna-binding protein
CPQ91_13785	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CPQ91_13790	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CPQ91_13795	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
CPQ91_13805	COG2755	lipolytic protein G-D-S-L family
CPQ91_13810	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CPQ91_13815	COG5609	conserved protein (DUF2294)
CPQ91_13820	COG3383	formate dehydrogenase (NAD+) activity
CPQ91_13825	COG2427	Protein of unknown function (DUF1641)
CPQ91_13860	COG0860	N-Acetylmuramoyl-L-alanine amidase
CPQ91_13900	COG1136	(ABC) transporter
CPQ91_13905	COG0577	efflux transmembrane transporter activity
CPQ91_13990	COG2197	response regulator
CPQ91_13995	COG4585	Histidine kinase
CPQ91_14000	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CPQ91_14005	COG0730	response to heat
CPQ91_14010	COG0425	Belongs to the sulfur carrier protein TusA family
CPQ91_14015	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CPQ91_14015	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CPQ91_14020	COG0425	Belongs to the sulfur carrier protein TusA family
CPQ91_14020	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CPQ91_14025	COG2210	Belongs to the sulfur carrier protein TusA family
CPQ91_14030	COG1937	Protein conserved in bacteria
CPQ91_14070	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CPQ91_14075	COG0113	porphobilinogen synthase activity
CPQ91_14080	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CPQ91_14085	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
CPQ91_14090	COG1733	regulation of RNA biosynthetic process
CPQ91_14095	COG3239	Fatty acid desaturase
CPQ91_14100	COG4585	Histidine kinase
CPQ91_14105	COG2197	response regulator
CPQ91_14110	COG0492	ferredoxin-NADP+ reductase activity
CPQ91_14115	COG0747	negative chemotaxis
CPQ91_14120	COG0601	transmembrane transport
CPQ91_14130	COG0444	Belongs to the ABC transporter superfamily
CPQ91_14135	COG4608	Belongs to the ABC transporter superfamily
CPQ91_14155	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_14170	COG2124	cytochrome p450
CPQ91_14175	COG0730	response to heat
CPQ91_14190	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_14195	COG1621	beta-fructofuranosidase activity
CPQ91_14200	COG3716	PTS system mannose fructose sorbose family IID component
CPQ91_14205	COG3715	PTS system
CPQ91_14210	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CPQ91_14215	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPQ91_14220	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CPQ91_14220	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CPQ91_14240	COG2169	Transcriptional regulator
CPQ91_14245	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CPQ91_14250	COG0656	L-ascorbic acid biosynthetic process
CPQ91_14255	COG2814	Major facilitator Superfamily
CPQ91_14260	COG1733	regulation of RNA biosynthetic process
CPQ91_14265	COG3340	Belongs to the peptidase S51 family
CPQ91_14270	COG1587	Uroporphyrinogen-III synthase
CPQ91_14280	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CPQ91_14285	COG0583	DNA-binding transcription factor activity
CPQ91_14290	COG2814	Major facilitator Superfamily
CPQ91_14300	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CPQ91_14300	COG2124	cytochrome p450
CPQ91_14305	COG1309	transcriptional regulator
CPQ91_14310	COG1404	Belongs to the peptidase S8 family
CPQ91_14315	COG2226	methyltransferase
CPQ91_14340	COG0626	cystathionine gamma-synthase activity
CPQ91_14345	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CPQ91_14350	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CPQ91_14355	COG2226	methyltransferase
CPQ91_14370	COG0768	penicillin binding
CPQ91_14375	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CPQ91_14380	COG0572	uridine kinase
CPQ91_14400	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CPQ91_14405	COG3906	Belongs to the UPF0473 family
CPQ91_14410	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CPQ91_14415	COG4472	Bacterial protein of unknown function (DUF965)
CPQ91_14420	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CPQ91_14425	COG0628	permease
CPQ91_14440	COG3881	PFAM PRC-barrel domain
CPQ91_14445	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CPQ91_14450	COG0457	Tetratricopeptide repeat
CPQ91_14455	COG0482	sulfurtransferase activity
CPQ91_14460	COG1104	cysteine desulfurase activity
CPQ91_14465	COG1959	2 iron, 2 sulfur cluster binding
CPQ91_14470	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CPQ91_14475	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CPQ91_14485	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CPQ91_14490	COG0124	histidyl-tRNA synthetase
CPQ91_14500	COG4991	sh3 domain protein
CPQ91_14500	COG0860	N-Acetylmuramoyl-L-alanine amidase
CPQ91_14500	COG3103	Sh3 type 3 domain protein
CPQ91_14505	COG1490	D-aminoacyl-tRNA deacylase activity
CPQ91_14510	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CPQ91_14515	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CPQ91_14520	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CPQ91_14520	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
CPQ91_14525	COG5416	Lipopolysaccharide assembly protein A domain
CPQ91_14530	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CPQ91_14530	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CPQ91_14540	COG2244	polysaccharide biosynthetic process
CPQ91_14545	COG2323	membrane
CPQ91_14555	COG1862	Preprotein translocase
CPQ91_14560	COG0343	queuine tRNA-ribosyltransferase activity
CPQ91_14565	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CPQ91_14575	COG2255	four-way junction helicase activity
CPQ91_14580	COG0632	four-way junction helicase activity
CPQ91_14590	COG2112	serine threonine protein kinase
CPQ91_14600	COG2318	DinB family
CPQ91_14605	COG4195	phage-related replication protein
CPQ91_14620	COG0217	transcriptional regulatory protein
CPQ91_14630	COG1388	LysM domain
CPQ91_14635	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
CPQ91_14640	COG0157	Belongs to the NadC ModD family
CPQ91_14645	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CPQ91_14650	COG1104	cysteine desulfurase activity
CPQ91_14655	COG1827	regulation of RNA biosynthetic process
CPQ91_14660	COG0077	Prephenate dehydratase
CPQ91_14665	COG4492	Belongs to the UPF0735 family
CPQ91_14670	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CPQ91_14675	COG3290	protein histidine kinase activity
CPQ91_14680	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CPQ91_14685	COG2868	ribosomal protein
CPQ91_14690	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CPQ91_14695	COG1994	Peptidase M50
CPQ91_14700	COG0739	heme binding
CPQ91_14705	COG3832	glyoxalase III activity
CPQ91_14710	COG0640	Transcriptional regulator
CPQ91_14715	COG2894	cell division
CPQ91_14720	COG0850	regulation of cytokinetic process
CPQ91_14725	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
CPQ91_14730	COG1792	Involved in formation and maintenance of cell shape
CPQ91_14735	COG1077	Cell shape determining protein MreB Mrl
CPQ91_14755	COG0457	Tetratricopeptide repeat
CPQ91_14760	COG5444	nuclease activity
CPQ91_14780	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
CPQ91_14790	COG0662	Cupin 2, conserved barrel domain protein
CPQ91_14825	COG5434	Belongs to the glycosyl hydrolase 28 family
CPQ91_14830	COG1705	Flagellar rod assembly protein muramidase FlgJ
CPQ91_14840	COG3953	SLT domain
CPQ91_14840	COG5280	Phage tail tape measure protein TP901
CPQ91_14900	COG1802	Transcriptional regulator
CPQ91_14900	COG4626	Terminase
CPQ91_14990	COG1396	sequence-specific DNA binding
CPQ91_15005	COG2003	Belongs to the UPF0758 family
CPQ91_15010	COG0424	maF-like protein
CPQ91_15020	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CPQ91_15025	COG0285	dihydrofolate synthase activity
CPQ91_15030	COG0525	valine-tRNA ligase activity
CPQ91_15040	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CPQ91_15045	COG1388	LysM domain
CPQ91_15050	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CPQ91_15055	COG0113	porphobilinogen synthase activity
CPQ91_15060	COG1587	Uroporphyrinogen-III synthase
CPQ91_15065	COG0181	hydroxymethylbilane synthase activity
CPQ91_15070	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CPQ91_15075	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
CPQ91_15085	COG0218	Necessary for normal cell division and for the maintenance of normal septation
CPQ91_15090	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CPQ91_15095	COG0470	DNA polymerase III
CPQ91_15095	COG1067	ATP-dependent peptidase activity
CPQ91_15100	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CPQ91_15105	COG0544	peptidyl-prolyl cis-trans isomerase activity
CPQ91_15110	COG1477	protein flavinylation
CPQ91_15110	COG0457	Tetratricopeptide repeat
CPQ91_15115	COG0066	3-isopropylmalate dehydratase activity
CPQ91_15120	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CPQ91_15125	COG0473	3-isopropylmalate dehydrogenase activity
CPQ91_15130	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CPQ91_15135	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CPQ91_15140	COG0440	acetolactate synthase activity
CPQ91_15145	COG0028	Belongs to the TPP enzyme family
CPQ91_15155	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CPQ91_15165	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CPQ91_15185	COG5518	Phage portal protein
CPQ91_15235	COG5444	nuclease activity
CPQ91_15240	COG0457	Tetratricopeptide repeat
CPQ91_15260	COG0622	Phosphoesterase
CPQ91_15265	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CPQ91_15270	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CPQ91_15275	COG5401	PFAM Sporulation and spore germination
CPQ91_15280	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CPQ91_15285	COG1846	Transcriptional regulator
CPQ91_15290	COG2197	response regulator
CPQ91_15300	COG0824	Thioesterase
CPQ91_15305	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CPQ91_15310	COG1053	succinate dehydrogenase
CPQ91_15315	COG2009	succinate dehydrogenase
CPQ91_15320	COG1719	4-vinyl reductase, 4VR
CPQ91_15325	COG0527	aspartate kinase activity
CPQ91_15330	COG0322	excinuclease ABC activity
CPQ91_15335	COG3118	belongs to the thioredoxin family
CPQ91_15340	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CPQ91_15345	COG2086	electron transfer activity
CPQ91_15350	COG1024	Enoyl-CoA hydratase
CPQ91_15355	COG1309	transcriptional regulator
CPQ91_15360	COG0318	PFAM AMP-dependent synthetase and ligase
CPQ91_15365	COG3766	membrane
CPQ91_15370	COG1193	negative regulation of DNA recombination
CPQ91_15375	COG1796	DNA polymerase
CPQ91_15375	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CPQ91_15380	COG1286	toxin biosynthetic process
CPQ91_15385	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
CPQ91_15390	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CPQ91_15415	COG1137	ATPase activity
CPQ91_15430	COG0072	phenylalanine-tRNA ligase activity
CPQ91_15430	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CPQ91_15435	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CPQ91_15440	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CPQ91_15450	COG1966	Carbon starvation protein
CPQ91_15465	COG0395	ABC-type sugar transport system, permease component
CPQ91_15470	COG1175	transmembrane transport
CPQ91_15475	COG1653	transport
CPQ91_15480	COG0371	Dehydrogenase
CPQ91_15485	COG0235	Class ii aldolase
CPQ91_15490	COG1069	ribulokinase activity
CPQ91_15495	COG2160	L-arabinose isomerase activity
CPQ91_15500	COG3507	Belongs to the glycosyl hydrolase 43 family
CPQ91_15505	COG1363	Peptidase, m42
CPQ91_15515	COG3326	Membrane
CPQ91_15520	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CPQ91_15525	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CPQ91_15530	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CPQ91_15535	COG1346	cytolysis
CPQ91_15545	COG3540	Alkaline phosphatase
CPQ91_15550	COG3279	Response regulator of the LytR AlgR family
CPQ91_15555	COG3275	phosphorelay sensor kinase activity
CPQ91_15570	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CPQ91_15580	COG0398	Pfam SNARE associated Golgi protein
CPQ91_15585	COG1484	DNA-dependent DNA replication
CPQ91_15590	COG3611	Membrane attachment protein
CPQ91_15595	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CPQ91_15610	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
CPQ91_15615	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CPQ91_15625	COG0237	dephospho-CoA kinase activity
CPQ91_15630	COG1971	Probably functions as a manganese efflux pump
CPQ91_15635	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CPQ91_15640	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CPQ91_15640	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CPQ91_15645	COG5002	protein histidine kinase activity
CPQ91_15650	COG0745	RESPONSE REGULATOR receiver
CPQ91_15655	COG0039	L-malate dehydrogenase activity
CPQ91_15660	COG0538	isocitrate dehydrogenase activity
CPQ91_15665	COG0372	Belongs to the citrate synthase family
CPQ91_15670	COG2707	UPF0756 membrane protein
CPQ91_15675	COG0628	permease
CPQ91_15680	COG3030	protein affecting phage T7 exclusion by the F plasmid
CPQ91_15690	COG0205	6-phosphofructokinase activity
CPQ91_15695	COG0825	malonyl-CoA metabolic process
CPQ91_15700	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CPQ91_15705	COG0281	malic enzyme
CPQ91_15710	COG0587	DNA-directed DNA polymerase activity
CPQ91_15730	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
CPQ91_15740	COG4109	DRTGG domain
CPQ91_15745	COG1695	Transcriptional regulator
CPQ91_15750	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CPQ91_15755	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_15760	COG0165	Argininosuccinate lyase
CPQ91_15765	COG0137	argininosuccinate synthase activity
CPQ91_15770	COG0521	Mo-molybdopterin cofactor biosynthetic process
CPQ91_15775	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CPQ91_15780	COG0827	DNA restriction-modification system
CPQ91_15785	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CPQ91_15790	COG3874	Sporulation protein YtfJ
CPQ91_15800	COG1714	RDD family
CPQ91_15805	COG0616	signal peptide processing
CPQ91_15810	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CPQ91_15815	COG1566	PFAM secretion protein HlyD family protein
CPQ91_15830	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CPQ91_15840	COG0301	tRNA thio-modification
CPQ91_15845	COG1104	cysteine desulfurase activity
CPQ91_15850	COG1114	Component of the transport system for branched-chain amino acids
CPQ91_15855	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
CPQ91_15860	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CPQ91_15865	COG1309	transcriptional regulator
CPQ91_15870	COG1956	GAF domain-containing protein
CPQ91_15885	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CPQ91_15900	COG3152	Membrane
CPQ91_15905	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CPQ91_15910	COG1522	sequence-specific DNA binding
CPQ91_15915	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CPQ91_15920	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CPQ91_15925	COG0454	-acetyltransferase
CPQ91_15930	COG0517	IMP dehydrogenase activity
CPQ91_15935	COG0123	including yeast histone deacetylase and acetoin utilization protein
CPQ91_15940	COG1360	Flagellar Motor Protein
CPQ91_15945	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CPQ91_15950	COG1609	Transcriptional regulator
CPQ91_15955	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
CPQ91_15955	COG1605	Chorismate mutase
CPQ91_15965	COG3118	belongs to the thioredoxin family
CPQ91_15970	COG4980	gas vesicle protein
CPQ91_15975	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
CPQ91_15980	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CPQ91_15985	COG1674	ftsk spoiiie
CPQ91_15990	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CPQ91_15995	COG4848	Belongs to the UPF0354 family
CPQ91_16000	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CPQ91_16010	COG1363	Peptidase, m42
CPQ91_16015	COG5584	Small secreted protein
CPQ91_16020	COG0281	malic enzyme
CPQ91_16025	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CPQ91_16030	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CPQ91_16040	COG0510	thiamine kinase activity
CPQ91_16045	COG1523	belongs to the glycosyl hydrolase 13 family
CPQ91_16050	COG1597	lipid kinase activity
CPQ91_16060	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
CPQ91_16065	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CPQ91_16080	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CPQ91_16085	COG2252	PERMEase
CPQ91_16090	COG1349	DNA-binding transcription factor activity
CPQ91_16095	COG1187	pseudouridine synthase activity
CPQ91_16100	COG2244	polysaccharide biosynthetic process
CPQ91_16105	COG2081	HI0933 family
CPQ91_16110	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CPQ91_16120	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CPQ91_16125	COG0457	Tetratricopeptide repeat
CPQ91_16135	COG5578	integral membrane protein
CPQ91_16140	COG0673	inositol 2-dehydrogenase activity
CPQ91_16145	COG1653	transport
CPQ91_16150	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
CPQ91_16155	COG4209	transmembrane transport
CPQ91_16160	COG2207	Transcriptional regulator
CPQ91_16165	COG1653	transport
CPQ91_16170	COG0395	ABC-type sugar transport system, permease component
CPQ91_16175	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CPQ91_16180	COG1073	alpha beta
CPQ91_16190	COG0583	DNA-binding transcription factor activity
CPQ91_16195	COG0346	lactoylglutathione lyase activity
CPQ91_16200	COG0495	leucyl-tRNA aminoacylation
CPQ91_16210	COG2814	Major facilitator Superfamily
CPQ91_16220	COG2433	Pfam Transposase IS66
CPQ91_16225	COG0577	efflux transmembrane transporter activity
CPQ91_16230	COG1136	(ABC) transporter
CPQ91_16240	COG1131	(ABC) transporter
CPQ91_16245	COG1725	Transcriptional regulator
CPQ91_16255	COG1242	4 iron, 4 sulfur cluster binding
CPQ91_16260	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CPQ91_16265	COG1301	dicarboxylic acid transport
CPQ91_16275	COG2267	carboxylic ester hydrolase activity
CPQ91_16280	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CPQ91_16285	COG0671	phosphoesterase, PA-phosphatase related
CPQ91_16290	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CPQ91_16290	COG0438	transferase activity, transferring glycosyl groups
CPQ91_16295	COG0367	asparagine synthase
CPQ91_16300	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CPQ91_16305	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
CPQ91_16310	COG1301	dicarboxylic acid transport
CPQ91_16320	COG1506	peptidase
CPQ91_16330	COG1116	anion transmembrane transporter activity
CPQ91_16335	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CPQ91_16340	COG0494	nUDIX hydrolase
CPQ91_16350	COG4824	toxin secretion phage lysis holin
CPQ91_16355	COG0783	Belongs to the Dps family
CPQ91_16370	COG1854	S-ribosylhomocysteine lyase activity
CPQ91_16375	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CPQ91_16380	COG0288	reversible hydration of carbon dioxide
CPQ91_16385	COG0523	cobalamin synthesis protein
CPQ91_16390	COG0803	Belongs to the bacterial solute-binding protein 9 family
CPQ91_16395	COG0254	rRNA binding
CPQ91_16400	COG1271	oxidase subunit
CPQ91_16405	COG1294	oxidase, subunit
CPQ91_16420	COG4948	Mandelate Racemase Muconate Lactonizing
CPQ91_16425	COG0318	PFAM AMP-dependent synthetase and ligase
CPQ91_16430	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CPQ91_16435	COG0596	Alpha beta hydrolase
CPQ91_16440	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
CPQ91_16445	COG1169	isochorismate synthase
CPQ91_16450	COG1575	Belongs to the MenA family. Type 1 subfamily
CPQ91_16455	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CPQ91_16465	COG0297	glycogen (starch) synthase activity
CPQ91_16470	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CPQ91_16480	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CPQ91_16605	COG1609	Transcriptional regulator
CPQ91_16610	COG3859	Proton-coupled thiamine transporter YuaJ
CPQ91_16615	COG3764	Sortase (surface protein transpeptidase)
CPQ91_16630	COG0457	Tetratricopeptide repeat
CPQ91_16635	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CPQ91_16640	COG0569	domain protein
CPQ91_16645	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CPQ91_16655	COG2318	DinB family
CPQ91_16665	COG1454	alcohol dehydrogenase
CPQ91_16675	COG1510	regulation of RNA biosynthetic process
CPQ91_16685	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
CPQ91_16690	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CPQ91_16695	COG2140	Oxalate decarboxylase
CPQ91_16725	COG1397	ADP-ribosylglycohydrolase
CPQ91_16760	COG3478	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
CPQ91_16770	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CPQ91_16775	COG0726	polysaccharide deacetylase
CPQ91_16780	COG1408	metallophosphoesterase
CPQ91_16785	COG1968	undecaprenyl-diphosphatase activity
CPQ91_16790	COG0628	permease
CPQ91_16795	COG0673	inositol 2-dehydrogenase activity
CPQ91_16805	COG0840	transmembrane signaling receptor activity
CPQ91_16810	COG0840	transmembrane signaling receptor activity
CPQ91_16815	COG0840	transmembrane signaling receptor activity
CPQ91_16825	COG2070	2-Nitropropane dioxygenase
CPQ91_16830	COG0432	Pfam Uncharacterised protein family UPF0047
CPQ91_16835	COG0366	Alpha amylase catalytic
CPQ91_16850	COG5297	Belongs to the glycosyl hydrolase family 6
CPQ91_16855	COG1253	flavin adenine dinucleotide binding
CPQ91_16860	COG2738	Putative neutral zinc metallopeptidase
CPQ91_16875	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CPQ91_16890	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
CPQ91_16960	COG1705	Flagellar rod assembly protein muramidase FlgJ
CPQ91_17025	COG4626	Terminase
CPQ91_17025	COG1802	Transcriptional regulator
CPQ91_17155	COG0166	Belongs to the GPI family
CPQ91_17160	COG1979	alcohol dehydrogenase
CPQ91_17165	COG2155	Conserved Protein
CPQ91_17170	COG1098	S1 RNA binding domain
CPQ91_17175	COG0436	Aminotransferase
CPQ91_17180	COG1522	sequence-specific DNA binding
CPQ91_17200	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CPQ91_17215	COG5018	Exonuclease
CPQ91_17220	COG2814	Major facilitator Superfamily
CPQ91_17225	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CPQ91_17230	COG3011	Protein conserved in bacteria
CPQ91_17240	COG3290	protein histidine kinase activity
CPQ91_17245	COG4565	transcriptional regulatory protein
CPQ91_17255	COG1183	phosphatidylcholine synthase activity
CPQ91_17260	COG0586	Pfam SNARE associated Golgi protein
CPQ91_17265	COG0688	phosphatidylethanolamine metabolic process
CPQ91_17270	COG3493	citrate carrier protein
CPQ91_17280	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CPQ91_17280	COG2111	Na H antiporter
CPQ91_17285	COG2111	Na H antiporter
CPQ91_17290	COG1006	Multisubunit Na H antiporter MnhC subunit
CPQ91_17295	COG0651	ATP synthesis coupled electron transport
CPQ91_17300	COG1863	multisubunit Na H antiporter MnhE subunit
CPQ91_17305	COG2212	antiporter activity
CPQ91_17310	COG1320	monovalent cation:proton antiporter activity
CPQ91_17315	COG2050	protein possibly involved in aromatic compounds catabolism
CPQ91_17320	COG2197	response regulator
CPQ91_17325	COG4585	Histidine kinase
CPQ91_17355	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
CPQ91_17360	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CPQ91_17365	COG1335	isochorismatase
CPQ91_17370	COG5506	Protein of unknown function (DUF1694)
CPQ91_17385	COG0628	permease
CPQ91_17390	COG1959	2 iron, 2 sulfur cluster binding
CPQ91_17405	COG1418	mRNA catabolic process
CPQ91_17410	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_17420	COG1511	domain protein
CPQ91_17425	COG1674	ftsk spoiiie
CPQ91_17425	COG0433	COG0433 Predicted ATPase
CPQ91_17430	COG4499	WXG100 protein secretion system (Wss), protein YukC
CPQ91_17435	COG5417	Belongs to the EsaB family
CPQ91_17440	COG4842	Belongs to the WXG100 family
CPQ91_17445	COG1115	amino acid carrier protein
CPQ91_17450	COG2508	Transcriptional regulator
CPQ91_17450	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
CPQ91_17455	COG0686	Belongs to the AlaDH PNT family
CPQ91_17465	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CPQ91_17470	COG1268	BioY protein
CPQ91_17475	COG2056	Na+-H+ antiporter family
CPQ91_17480	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CPQ91_17485	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
CPQ91_17490	COG3584	3D domain protein
CPQ91_17500	COG1252	NADH dehydrogenase
CPQ91_17505	COG0492	ferredoxin-NADP+ reductase activity
CPQ91_17520	COG0456	acetyltransferase
CPQ91_17525	COG0316	Belongs to the HesB IscA family
CPQ91_17530	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CPQ91_17535	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CPQ91_17540	COG4844	belongs to the
CPQ91_17545	COG1252	NADH dehydrogenase
CPQ91_17550	COG5646	InterPro IPR014922
CPQ91_17560	COG0457	Tetratricopeptide repeat
CPQ91_17565	COG3479	Phenolic acid decarboxylase
CPQ91_17575	COG4837	Protein of unknown function (DUF1462)
CPQ91_17580	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CPQ91_17590	COG0823	Involved in the tonB-independent uptake of proteins
CPQ91_17590	COG4946	Tricorn protease homolog
CPQ91_17590	COG1506	peptidase
CPQ91_17595	COG0083	homoserine kinase activity
CPQ91_17600	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CPQ91_17605	COG0460	homoserine dehydrogenase
CPQ91_17615	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CPQ91_17620	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CPQ91_17625	COG0647	UMP catabolic process
CPQ91_17630	COG2445	Protein of unknown function DUF86
CPQ91_17635	COG4470	Protein conserved in bacteria
CPQ91_17650	COG0739	heme binding
CPQ91_17660	COG0733	neurotransmitter:sodium symporter activity
CPQ91_17670	COG3377	Domain of unknown function (DUF1805)
CPQ91_17675	COG0737	Belongs to the 5'-nucleotidase family
CPQ91_17680	COG0730	response to heat
CPQ91_17685	COG1801	Protein of unknown function DUF72
CPQ91_17695	COG3226	Transcriptional regulator
CPQ91_17705	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CPQ91_17710	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CPQ91_17720	COG2814	Major facilitator Superfamily
CPQ91_17725	COG1288	antiporter activity
CPQ91_17730	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CPQ91_17740	COG2356	endonuclease I
CPQ91_17750	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CPQ91_17765	COG0457	Tetratricopeptide repeat
CPQ91_17770	COG0719	Fe-S assembly protein
CPQ91_17775	COG0822	iron-sulfur transferase activity
CPQ91_17780	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CPQ91_17785	COG0719	Fe-S assembly protein
CPQ91_17790	COG0396	ATPase activity
CPQ91_17800	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CPQ91_17805	COG1464	Belongs to the NlpA lipoprotein family
CPQ91_17810	COG2011	ABC-type metal ion transport system permease component
CPQ91_17815	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CPQ91_17825	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CPQ91_17830	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CPQ91_17840	COG0509	glycine decarboxylation via glycine cleavage system
CPQ91_17845	COG1393	Belongs to the ArsC family
CPQ91_17850	COG1960	acyl-CoA dehydrogenase activity
CPQ91_17855	COG0183	Belongs to the thiolase family
CPQ91_17860	COG1024	Enoyl-CoA hydratase
CPQ91_17860	COG1250	3-hydroxyacyl-CoA dehydrogenase
CPQ91_17875	COG5577	PFAM Coat F domain
CPQ91_17890	COG1120	ATPase activity
CPQ91_17895	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CPQ91_17900	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CPQ91_17905	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CPQ91_17920	COG1686	Belongs to the peptidase S11 family
CPQ91_17925	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_17930	COG0783	Belongs to the Dps family
CPQ91_17935	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CPQ91_17940	COG0745	RESPONSE REGULATOR receiver
CPQ91_17945	COG2770	Histidine kinase
CPQ91_17945	COG2205	protein histidine kinase activity
CPQ91_17955	COG1309	transcriptional regulator
CPQ91_17960	COG0114	fumarate hydratase activity
CPQ91_17970	COG0697	spore germination
CPQ91_17975	COG0814	amino acid
CPQ91_17990	COG2197	response regulator
CPQ91_17995	COG4585	Histidine kinase
CPQ91_18000	COG4758	membrane
CPQ91_18010	COG1842	Phage shock protein A
CPQ91_18015	COG4758	membrane
CPQ91_18020	COG4677	pectinesterase activity
CPQ91_18025	COG2096	Adenosyltransferase
CPQ91_18040	COG1454	alcohol dehydrogenase
CPQ91_18045	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CPQ91_18050	COG1120	ATPase activity
CPQ91_18055	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CPQ91_18060	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CPQ91_18065	COG1802	Transcriptional regulator
CPQ91_18070	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_18075	COG2258	MOSC domain
CPQ91_18080	COG0583	DNA-binding transcription factor activity
CPQ91_18090	COG2721	sulfolactate sulfo-lyase activity
CPQ91_18095	COG0246	Mannitol dehydrogenase
CPQ91_18100	COG1609	Transcriptional regulator
CPQ91_18105	COG2211	Major facilitator Superfamily
CPQ91_18110	COG1904	glucuronate isomerase
CPQ91_18115	COG2205	protein histidine kinase activity
CPQ91_18120	COG0745	RESPONSE REGULATOR receiver
CPQ91_18125	COG1120	ATPase activity
CPQ91_18130	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CPQ91_18135	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CPQ91_18140	COG0531	amino acid
CPQ91_18150	COG1988	membrane-bound metal-dependent
CPQ91_18155	COG1368	sulfuric ester hydrolase activity
CPQ91_18160	COG2814	Major facilitator Superfamily
CPQ91_18165	COG0656	L-ascorbic acid biosynthetic process
CPQ91_18170	COG1940	carbohydrate kinase activity
CPQ91_18175	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CPQ91_18185	COG3973	AAA domain
CPQ91_18190	COG2860	membrane
CPQ91_18195	COG0456	acetyltransferase
CPQ91_18195	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CPQ91_18200	COG0456	acetyltransferase
CPQ91_18205	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
CPQ91_18210	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CPQ91_18215	COG2217	Heavy metal translocating P-type atpase
CPQ91_18220	COG1653	transport
CPQ91_18225	COG1175	transmembrane transport
CPQ91_18230	COG0395	ABC-type sugar transport system, permease component
CPQ91_18235	COG1501	Belongs to the glycosyl hydrolase 31 family
CPQ91_18240	COG1472	Belongs to the glycosyl hydrolase 3 family
CPQ91_18245	COG1121	(ABC) transporter
CPQ91_18250	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CPQ91_18255	COG0803	Belongs to the bacterial solute-binding protein 9 family
CPQ91_18275	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPQ91_18275	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CPQ91_18275	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CPQ91_18295	COG2217	Heavy metal translocating P-type atpase
CPQ91_18300	COG2608	mercury ion transmembrane transporter activity
CPQ91_18305	COG1937	Protein conserved in bacteria
CPQ91_18310	COG0693	protein deglycase activity
CPQ91_18315	COG1349	DNA-binding transcription factor activity
CPQ91_18320	COG1070	Carbohydrate kinase
CPQ91_18325	COG4952	isomerase
CPQ91_18335	COG3347	Dehydrogenase
CPQ91_18335	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_18340	COG2814	Major facilitator Superfamily
CPQ91_18345	COG2814	Major facilitator Superfamily
CPQ91_18355	COG2124	cytochrome p450
CPQ91_18365	COG1846	Transcriptional regulator
CPQ91_18375	COG0673	inositol 2-dehydrogenase activity
CPQ91_18380	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CPQ91_18395	COG1191	sigma factor activity
CPQ91_18405	COG2140	Oxalate decarboxylase
CPQ91_18435	COG5444	nuclease activity
CPQ91_18455	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CPQ91_18460	COG0557	exoribonuclease II activity
CPQ91_18465	COG1647	Serine aminopeptidase, S33
CPQ91_18470	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CPQ91_18475	COG2002	toxin-antitoxin pair type II binding
CPQ91_18480	COG1476	TRANSCRIPTIONal
CPQ91_18485	COG1396	sequence-specific DNA binding
CPQ91_18490	COG1396	sequence-specific DNA binding
CPQ91_18495	COG1174	glycine betaine transport
CPQ91_18500	COG1732	Glycine betaine
CPQ91_18505	COG1174	glycine betaine transport
CPQ91_18510	COG0517	IMP dehydrogenase activity
CPQ91_18510	COG1125	glycine betaine transport
CPQ91_18515	COG1510	regulation of RNA biosynthetic process
CPQ91_18520	COG2095	MarC family integral membrane protein
CPQ91_18525	COG3064	Membrane
CPQ91_18535	COG4640	response to antibiotic
CPQ91_18540	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CPQ91_18555	COG0693	protein deglycase activity
CPQ91_18560	COG0148	phosphopyruvate hydratase activity
CPQ91_18565	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CPQ91_18570	COG0149	triose-phosphate isomerase activity
CPQ91_18575	COG0126	phosphoglycerate kinase activity
CPQ91_18580	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CPQ91_18585	COG2390	Transcriptional regulator
CPQ91_18590	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CPQ91_18595	COG1113	amino acid transport
CPQ91_18615	COG1556	Lactate utilization protein
CPQ91_18620	COG1139	Iron-sulfur cluster binding protein
CPQ91_18625	COG0247	lactate metabolic process
CPQ91_18630	COG2186	Transcriptional regulator
CPQ91_18635	COG1620	l-lactate permease
CPQ91_18640	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CPQ91_18650	COG5039	Polysaccharide pyruvyl transferase
CPQ91_18655	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CPQ91_18660	COG0110	maltose O-acetyltransferase activity
CPQ91_18665	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CPQ91_18670	COG2244	polysaccharide biosynthetic process
CPQ91_18675	COG1216	Glycosyl transferase, family 2
CPQ91_18680	COG5039	Polysaccharide pyruvyl transferase
CPQ91_18685	COG1216	Glycosyl transferase, family 2
CPQ91_18695	COG0438	transferase activity, transferring glycosyl groups
CPQ91_18700	COG1215	transferase activity, transferring glycosyl groups
CPQ91_18705	COG0438	transferase activity, transferring glycosyl groups
CPQ91_18710	COG1086	Polysaccharide biosynthesis protein
CPQ91_18715	COG0489	protein tyrosine kinase activity
CPQ91_18720	COG3944	biosynthesis protein
CPQ91_18725	COG1396	sequence-specific DNA binding
CPQ91_18730	COG2249	NAD(P)H dehydrogenase (quinone) activity
CPQ91_18740	COG2271	Major facilitator Superfamily
CPQ91_18750	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CPQ91_18765	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CPQ91_18775	COG1733	regulation of RNA biosynthetic process
CPQ91_18780	COG1902	pentaerythritol trinitrate reductase activity
CPQ91_18785	COG1621	beta-fructofuranosidase activity
CPQ91_18790	COG1621	beta-fructofuranosidase activity
CPQ91_18805	COG0740	serine-type endopeptidase activity
CPQ91_18810	COG1611	Belongs to the LOG family
CPQ91_18815	COG1694	Mazg nucleotide pyrophosphohydrolase
CPQ91_18820	COG1078	dGTPase activity
CPQ91_18825	COG0659	secondary active sulfate transmembrane transporter activity
CPQ91_18830	COG0288	reversible hydration of carbon dioxide
CPQ91_18835	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CPQ91_18840	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CPQ91_18845	COG0640	Transcriptional regulator
CPQ91_18855	COG2732	(Barnase) inhibitor
CPQ91_18860	COG2162	N-hydroxyarylamine O-acetyltransferase activity
CPQ91_18865	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPQ91_18870	COG1481	regulation of sporulation
CPQ91_18875	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CPQ91_18880	COG1660	Displays ATPase and GTPase activities
CPQ91_18885	COG1051	belongs to the nudix hydrolase family
CPQ91_18895	COG0492	ferredoxin-NADP+ reductase activity
CPQ91_18900	COG0457	Tetratricopeptide repeat
CPQ91_18905	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CPQ91_18910	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CPQ91_18910	COG0140	phosphoribosyl-ATP diphosphatase activity
CPQ91_18915	COG0107	imidazoleglycerol-phosphate synthase activity
CPQ91_18920	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
CPQ91_18925	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CPQ91_18930	COG0131	Imidazoleglycerol-phosphate dehydratase
CPQ91_18935	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CPQ91_18940	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CPQ91_18945	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
CPQ91_18950	COG4990	cell redox homeostasis
CPQ91_18955	COG5297	Belongs to the glycosyl hydrolase family 6
CPQ91_18960	COG0110	maltose O-acetyltransferase activity
CPQ91_18965	COG0546	phosphoglycolate phosphatase activity
CPQ91_18970	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CPQ91_18975	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CPQ91_18980	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CPQ91_18985	COG1846	Transcriptional regulator
CPQ91_18990	COG2814	Major facilitator Superfamily
CPQ91_18995	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CPQ91_19000	COG1950	PFAM Membrane protein of
CPQ91_19005	COG1983	PspC domain protein
CPQ91_19010	COG3595	metallopeptidase activity
CPQ91_19035	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CPQ91_19040	COG0556	nucleotide-excision repair
CPQ91_19045	COG4897	Protein conserved in bacteria
CPQ91_19055	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CPQ91_19065	COG0793	Belongs to the peptidase S41A family
CPQ91_19065	COG3409	Peptidoglycan-binding domain 1 protein
CPQ91_19070	COG0473	3-isopropylmalate dehydrogenase activity
CPQ91_19075	COG3883	PFAM NLP P60 protein
CPQ91_19075	COG0791	NLP P60 protein
CPQ91_19080	COG2177	Part of the ABC transporter FtsEX involved in
CPQ91_19085	COG2884	Cell division ATP-binding protein ftsE
CPQ91_19095	COG2010	Cytochrome c
CPQ91_19100	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CPQ91_19110	COG0653	protein targeting
CPQ91_19115	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CPQ91_19130	COG1516	flagellar protein fliS
CPQ91_19135	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CPQ91_19140	COG1334	flagellar protein FlaG
CPQ91_19150	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CPQ91_19155	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
CPQ91_19160	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
CPQ91_19170	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CPQ91_19175	COG4786	Flagellar basal body rod
CPQ91_19175	COG1256	bacterial-type flagellum assembly
CPQ91_19180	COG3418	PFAM FlgN family protein
CPQ91_19185	COG2747	anti-sigma28 factor FlgM
CPQ91_19195	COG1040	competence protein
CPQ91_19205	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
CPQ91_19210	COG1307	EDD domain protein, DegV family
CPQ91_19215	COG2197	response regulator
CPQ91_19220	COG4585	Histidine kinase
CPQ91_19225	COG1739	Uncharacterized protein family UPF0029
CPQ91_19230	COG1316	TRANSCRIPTIONal
CPQ91_19240	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CPQ91_19245	COG0438	transferase activity, transferring glycosyl groups
CPQ91_19250	COG1215	transferase activity, transferring glycosyl groups
CPQ91_19255	COG3206	protein involved in exopolysaccharide biosynthesis
CPQ91_19260	COG3307	-O-antigen
CPQ91_19265	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CPQ91_19270	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CPQ91_19275	COG0297	glycogen (starch) synthase activity
CPQ91_19275	COG0438	transferase activity, transferring glycosyl groups
CPQ91_19280	COG2244	polysaccharide biosynthetic process
CPQ91_19290	COG2247	cell wall binding repeat
CPQ91_19290	COG0860	N-Acetylmuramoyl-L-alanine amidase
CPQ91_19295	COG2385	sporulation resulting in formation of a cellular spore
CPQ91_19295	COG2247	cell wall binding repeat
CPQ91_19305	COG1316	TRANSCRIPTIONal
CPQ91_19315	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CPQ91_19320	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CPQ91_19325	COG1134	teichoic acid transport
CPQ91_19330	COG1682	transport, permease protein
CPQ91_19345	COG0463	Glycosyl transferase, family 2
CPQ91_19345	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CPQ91_19350	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CPQ91_19355	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CPQ91_19360	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
CPQ91_19365	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CPQ91_19370	COG4193	domain, Protein
CPQ91_19375	COG1482	cell wall glycoprotein biosynthetic process
CPQ91_19395	COG0800	Aldolase
CPQ91_19400	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CPQ91_19405	COG1609	Transcriptional regulator
CPQ91_19410	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
CPQ91_19415	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_19420	COG1063	alcohol dehydrogenase
CPQ91_19425	COG2814	Major facilitator Superfamily
CPQ91_19430	COG1316	TRANSCRIPTIONal
CPQ91_19435	COG0561	phosphatase activity
CPQ91_19440	COG0791	NLP P60 protein
CPQ91_19450	COG2843	Capsule synthesis protein
CPQ91_19460	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CPQ91_19465	COG1609	Transcriptional regulator
CPQ91_19470	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CPQ91_19475	COG1869	D-ribose catabolic process
CPQ91_19480	COG1129	ABC transporter
CPQ91_19485	COG1172	Belongs to the binding-protein-dependent transport system permease family
CPQ91_19490	COG1879	ABC-type sugar transport system periplasmic component
CPQ91_19500	COG3527	Alpha-acetolactate decarboxylase
CPQ91_19505	COG0028	Belongs to the TPP enzyme family
CPQ91_19510	COG0583	DNA-binding transcription factor activity
CPQ91_19515	COG0405	Gamma-glutamyltransferase
CPQ91_19520	COG1522	sequence-specific DNA binding
CPQ91_19525	COG2059	Chromate
CPQ91_19530	COG2059	Chromate
CPQ91_19535	COG4464	protein tyrosine phosphatase activity
CPQ91_19540	COG3944	biosynthesis protein
CPQ91_19550	COG4715	Zinc finger, swim domain protein
CPQ91_19555	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CPQ91_19560	COG0561	phosphatase activity
CPQ91_19565	COG1349	DNA-binding transcription factor activity
CPQ91_19575	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_19585	COG3732	PTS system glucitol sorbitol-specific
CPQ91_19605	COG0629	single-stranded DNA binding
CPQ91_19620	COG1970	mechanosensitive ion channel activity
CPQ91_19625	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CPQ91_19630	COG4786	Flagellar basal body rod
CPQ91_19635	COG4786	Flagellar basal body rod
CPQ91_19640	COG1077	Cell shape determining protein MreB Mrl
CPQ91_19645	COG1609	Transcriptional regulator
CPQ91_19655	COG1846	Transcriptional regulator
CPQ91_19660	COG2814	Major facilitator Superfamily
CPQ91_19665	COG0671	phosphoesterase, PA-phosphatase related
CPQ91_19670	COG1227	inorganic diphosphatase activity
CPQ91_19685	COG3546	catalase activity
CPQ91_19690	COG3361	conserved protein (COG2071)
CPQ91_19695	COG0517	IMP dehydrogenase activity
CPQ91_19700	COG0598	Magnesium transport protein CorA
CPQ91_19705	COG1253	flavin adenine dinucleotide binding
CPQ91_19710	COG0004	ammonium transporteR
CPQ91_19715	COG0347	Belongs to the P(II) protein family
CPQ91_19720	COG0740	serine-type endopeptidase activity
CPQ91_19730	COG0739	heme binding
CPQ91_19735	COG1247	-acetyltransferase
CPQ91_19745	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CPQ91_19755	COG0477	Major facilitator Superfamily
CPQ91_19765	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CPQ91_19770	COG3433	isochorismatase activity
CPQ91_19770	COG1535	isochorismatase
CPQ91_19775	COG1021	2,3-dihydroxybenzoate-AMP ligase
CPQ91_19780	COG1169	isochorismate synthase
CPQ91_19785	COG1028	Short-chain dehydrogenase reductase Sdr
CPQ91_19790	COG2819	hydrolase of the alpha beta superfamily
CPQ91_19795	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CPQ91_19800	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CPQ91_19805	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CPQ91_19810	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CPQ91_19810	COG2207	Transcriptional regulator
CPQ91_19820	COG2910	NAD(P)H-binding
CPQ91_19825	COG1959	2 iron, 2 sulfur cluster binding
CPQ91_19830	COG1994	Peptidase M50
CPQ91_19835	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CPQ91_19840	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CPQ91_19850	COG3383	formate dehydrogenase (NAD+) activity
CPQ91_19855	COG2304	oxidoreductase activity
CPQ91_19860	COG2304	oxidoreductase activity
CPQ91_19865	COG2385	sporulation resulting in formation of a cellular spore
CPQ91_19880	COG4836	Membrane
CPQ91_19885	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CPQ91_19890	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CPQ91_19895	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CPQ91_19900	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CPQ91_19905	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CPQ91_19910	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CPQ91_19915	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CPQ91_19935	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CPQ91_19940	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CPQ91_19945	COG4475	Protein of unknown function (DUF436)
CPQ91_19950	COG0698	ribose 5-phosphate isomerase
CPQ91_19955	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CPQ91_19960	COG1971	Probably functions as a manganese efflux pump
CPQ91_19965	COG0009	L-threonylcarbamoyladenylate synthase
CPQ91_19970	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CPQ91_19980	COG0738	Major facilitator superfamily
CPQ91_19985	COG0673	inositol 2-dehydrogenase activity
CPQ91_19990	COG0561	phosphatase activity
CPQ91_19995	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CPQ91_20000	COG1609	Transcriptional regulator
CPQ91_20005	COG2890	protein-(glutamine-N5) methyltransferase activity
CPQ91_20010	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CPQ91_20015	COG0346	lactoylglutathione lyase activity
CPQ91_20020	COG0789	Transcriptional regulator
CPQ91_20025	COG0679	Auxin Efflux Carrier
CPQ91_20030	COG0281	malic enzyme
CPQ91_20035	COG1435	thymidine kinase activity
CPQ91_20040	COG0254	rRNA binding
CPQ91_20045	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CPQ91_20050	COG1494	fructose-1,6-bisphosphatase
CPQ91_20055	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CPQ91_20060	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CPQ91_20065	COG0191	fructose-bisphosphate aldolase activity
CPQ91_20070	COG2204	response regulator
CPQ91_20075	COG4821	SIS domain
CPQ91_20080	COG0504	CTP synthase activity
CPQ91_20085	COG3343	RNA polymerase activity
CPQ91_20090	COG1960	acyl-CoA dehydrogenase activity
CPQ91_20095	COG1960	acyl-CoA dehydrogenase activity
CPQ91_20100	COG1250	3-hydroxyacyl-CoA dehydrogenase
CPQ91_20105	COG0183	Belongs to the thiolase family
CPQ91_20110	COG0247	lactate metabolic process
CPQ91_20110	COG2181	nitrate reductase activity
CPQ91_20115	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CPQ91_20125	COG0018	arginyl-trna synthetase
CPQ91_20130	COG4506	Protein conserved in bacteria
CPQ91_20135	COG0010	Belongs to the arginase family
CPQ91_20140	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CPQ91_20155	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CPQ91_20165	COG1994	Peptidase M50
CPQ91_20170	COG1942	4-Oxalocrotonate Tautomerase
CPQ91_20180	COG3465	dGTPase activity
CPQ91_20185	COG1078	dGTPase activity
CPQ91_20190	COG4844	belongs to the
CPQ91_20215	COG2814	Major facilitator Superfamily
CPQ91_20240	COG1414	Transcriptional regulator
CPQ91_20250	COG0280	phosphate acetyltransferase
CPQ91_20270	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CPQ91_20290	COG1131	(ABC) transporter
CPQ91_20305	COG2363	Small membrane protein
CPQ91_20310	COG2233	PERMEase
CPQ91_20320	COG1012	belongs to the aldehyde dehydrogenase family
CPQ91_20325	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CPQ91_20330	COG1216	Glycosyl transferase, family 2
CPQ91_20335	COG0351	phosphomethylpyrimidine kinase
CPQ91_20345	COG1621	beta-fructofuranosidase activity
CPQ91_20350	COG1263	PTS System
CPQ91_20350	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CPQ91_20355	COG3711	transcriptional antiterminator
CPQ91_20365	COG1404	Belongs to the peptidase S8 family
CPQ91_20375	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CPQ91_20380	COG0778	Nitroreductase
CPQ91_20385	COG1473	amidohydrolase
CPQ91_20390	COG0772	Belongs to the SEDS family
CPQ91_20395	COG0772	Belongs to the SEDS family
CPQ91_20420	COG0456	acetyltransferase
CPQ91_20455	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CPQ91_20465	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CPQ91_20470	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CPQ91_20475	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CPQ91_20495	COG3162	membrane
CPQ91_20500	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CPQ91_20505	COG1070	Carbohydrate kinase
CPQ91_20510	COG2115	Belongs to the xylose isomerase family
CPQ91_20520	COG0352	thiamine-phosphate diphosphorylase activity
CPQ91_20525	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
CPQ91_20530	COG0583	DNA-binding transcription factor activity
CPQ91_20545	COG1380	Effector of murein hydrolase LrgA
CPQ91_20550	COG1346	cytolysis
CPQ91_20560	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CPQ91_20565	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CPQ91_20570	COG0346	lactoylglutathione lyase activity
CPQ91_20575	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CPQ91_20580	COG1442	glycosyl transferase family 8
CPQ91_20595	COG4585	Histidine kinase
CPQ91_20600	COG2197	response regulator
CPQ91_20605	COG2409	Drug exporters of the RND superfamily
CPQ91_20610	COG5522	Integral membrane protein (intg_mem_TP0381)
CPQ91_20615	COG2271	Major facilitator Superfamily
CPQ91_20620	COG4948	Mandelate Racemase Muconate Lactonizing
CPQ91_20625	COG0800	Aldolase
CPQ91_20630	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CPQ91_20640	COG2234	aminopeptidase activity
CPQ91_20645	COG0477	Major facilitator Superfamily
CPQ91_20655	COG2357	RelA SpoT domain protein
CPQ91_20670	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CPQ91_20675	COG1696	Membrane protein involved in D-alanine export
CPQ91_20680	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CPQ91_20685	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CPQ91_20690	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CPQ91_20695	COG2814	Major facilitator Superfamily
CPQ91_20700	COG1486	melibiose metabolic process
CPQ91_20705	COG1447	Phosphotransferase system cellobiose-specific component IIA
CPQ91_20710	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CPQ91_20715	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CPQ91_20725	COG2094	Belongs to the DNA glycosylase MPG family
CPQ91_20735	COG0372	Belongs to the citrate synthase family
CPQ91_20740	COG2079	MmgE PrpD family protein
CPQ91_20745	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CPQ91_20760	COG1132	(ABC) transporter
CPQ91_20765	COG2755	lipolytic protein G-D-S-L family
CPQ91_20780	COG2814	Major facilitator Superfamily
CPQ91_20785	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CPQ91_20790	COG1131	(ABC) transporter
CPQ91_20810	COG1595	DNA-templated transcription, initiation
CPQ91_20815	COG2814	Major facilitator Superfamily
CPQ91_20820	COG0753	catalase activity
CPQ91_20825	COG0753	catalase activity
CPQ91_20830	COG0735	belongs to the Fur family
CPQ91_20840	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CPQ91_20845	COG1131	(ABC) transporter
CPQ91_20860	COG1131	(ABC) transporter
CPQ91_20910	COG3866	Pectate lyase
CPQ91_20915	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CPQ91_20920	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CPQ91_20925	COG4988	ABC transporter
CPQ91_20930	COG1294	oxidase, subunit
CPQ91_20935	COG1271	oxidase subunit
CPQ91_20945	COG2116	formate transmembrane transporter activity
CPQ91_20955	COG0281	malic enzyme
CPQ91_20960	COG1757	Na H antiporter
CPQ91_20965	COG1027	Aspartate ammonia-lyase
CPQ91_20970	COG0252	asparaginase activity
CPQ91_20975	COG1396	sequence-specific DNA binding
CPQ91_20980	COG2706	6-phosphogluconolactonase activity
CPQ91_20990	COG2205	protein histidine kinase activity
CPQ91_21000	COG1136	(ABC) transporter
CPQ91_21005	COG0577	efflux transmembrane transporter activity
CPQ91_21010	COG5294	Protein conserved in bacteria
CPQ91_21020	COG0726	polysaccharide deacetylase
CPQ91_21030	COG1215	transferase activity, transferring glycosyl groups
CPQ91_21035	COG3493	citrate carrier protein
CPQ91_21040	COG0584	glycerophosphoryl diester phosphodiesterase
CPQ91_21055	COG1368	sulfuric ester hydrolase activity
CPQ91_21065	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CPQ91_21080	COG2235	arginine
CPQ91_21085	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CPQ91_21095	COG0549	Belongs to the carbamate kinase family
CPQ91_21105	COG2723	6-phospho-beta-galactosidase activity
CPQ91_21110	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CPQ91_21120	COG1595	DNA-templated transcription, initiation
CPQ91_21145	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CPQ91_21150	COG2195	Cleaves the N-terminal amino acid of tripeptides
CPQ91_21160	COG1621	beta-fructofuranosidase activity
CPQ91_21165	COG2223	nitrite transmembrane transporter activity
CPQ91_21170	COG0395	ABC-type sugar transport system, permease component
CPQ91_21175	COG1175	transmembrane transport
CPQ91_21185	COG1609	Transcriptional regulator
CPQ91_21200	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CPQ91_21205	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CPQ91_21210	COG0463	Glycosyl transferase, family 2
CPQ91_21215	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CPQ91_21245	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CPQ91_21250	COG0753	catalase activity
CPQ91_21250	COG0693	protein deglycase activity
CPQ91_21260	COG2723	6-phospho-beta-galactosidase activity
CPQ91_21265	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CPQ91_21265	COG2190	(PTS) system
CPQ91_21265	COG1263	PTS System
CPQ91_21270	COG3711	transcriptional antiterminator
CPQ91_21275	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CPQ91_21280	COG1122	ATPase activity
CPQ91_21285	COG4721	ABC-type cobalt transport system, permease component
CPQ91_21290	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CPQ91_21295	COG2224	Isocitrate lyase
CPQ91_21300	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CPQ91_21310	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CPQ91_21315	COG0577	efflux transmembrane transporter activity
CPQ91_21320	COG1136	(ABC) transporter
CPQ91_21325	COG2205	protein histidine kinase activity
CPQ91_21330	COG0745	RESPONSE REGULATOR receiver
CPQ91_21335	COG2723	6-phospho-beta-galactosidase activity
CPQ91_21340	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CPQ91_21340	COG2190	(PTS) system
CPQ91_21340	COG1263	PTS System
CPQ91_21350	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
CPQ91_21355	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CPQ91_21360	COG3507	Belongs to the glycosyl hydrolase 43 family
CPQ91_21365	COG0513	Belongs to the DEAD box helicase family
CPQ91_21395	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
CPQ91_21400	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CPQ91_21405	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CPQ91_21410	COG2390	Transcriptional regulator
CPQ91_21420	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CPQ91_21425	COG3706	GGDEF domain
CPQ91_21430	COG5298	Protein conserved in bacteria
CPQ91_21435	COG1215	transferase activity, transferring glycosyl groups
CPQ91_21445	COG3977	Valine--pyruvate aminotransferase
CPQ91_21460	COG1181	Belongs to the D-alanine--D-alanine ligase family
CPQ91_21470	COG0191	fructose-bisphosphate aldolase activity
CPQ91_21475	COG1082	Xylose isomerase domain protein TIM barrel
CPQ91_21480	COG1082	Xylose isomerase domain protein TIM barrel
CPQ91_21485	COG0673	inositol 2-dehydrogenase activity
CPQ91_21490	COG2814	Major facilitator Superfamily
CPQ91_21495	COG1082	Xylose isomerase domain protein TIM barrel
CPQ91_21500	COG3962	Belongs to the TPP enzyme family
CPQ91_21505	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CPQ91_21510	COG3718	enzyme involved in inositol metabolism
CPQ91_21515	COG1012	belongs to the aldehyde dehydrogenase family
CPQ91_21520	COG1349	DNA-binding transcription factor activity
CPQ91_21525	COG0667	Aldo Keto reductase
CPQ91_21530	COG0584	glycerophosphoryl diester phosphodiesterase
CPQ91_21535	COG2271	Major facilitator Superfamily
CPQ91_21540	COG0326	Molecular chaperone. Has ATPase activity
CPQ91_21545	COG0488	(ABC) transporter
CPQ91_21550	COG0561	phosphatase activity
CPQ91_21570	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CPQ91_21600	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
CPQ91_21605	COG0577	efflux transmembrane transporter activity
CPQ91_21610	COG1136	(ABC) transporter
CPQ91_21615	COG2205	protein histidine kinase activity
CPQ91_21620	COG0745	RESPONSE REGULATOR receiver
CPQ91_21630	COG0840	transmembrane signaling receptor activity
CPQ91_21630	COG5278	phosphoserine phosphatase activity
CPQ91_21635	COG1115	amino acid carrier protein
CPQ91_21640	COG0686	Belongs to the AlaDH PNT family
CPQ91_21645	COG3867	Arabinogalactan endo-beta-1,4-galactanase
CPQ91_21650	COG1874	Beta-galactosidase
CPQ91_21655	COG3833	ABC-type maltose transport systems, permease component
CPQ91_21660	COG1175	transmembrane transport
CPQ91_21665	COG2182	Extracellular solute-binding protein
CPQ91_21670	COG1609	Transcriptional regulator
CPQ91_21680	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CPQ91_21685	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
CPQ91_21690	COG1940	carbohydrate kinase activity
CPQ91_21715	COG1012	belongs to the aldehyde dehydrogenase family
CPQ91_21715	COG1454	alcohol dehydrogenase
CPQ91_21720	COG0450	alkyl hydroperoxide reductase
CPQ91_21725	COG3634	alkyl hydroperoxide reductase activity
CPQ91_21750	COG1131	(ABC) transporter
CPQ91_21755	COG0842	Transport permease protein
CPQ91_21760	COG4585	Histidine kinase
CPQ91_21765	COG2197	response regulator
CPQ91_21790	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CPQ91_21805	COG0456	acetyltransferase
CPQ91_21820	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CPQ91_21825	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CPQ91_21830	COG4853	Protein conserved in bacteria
CPQ91_21835	COG4863	YycH protein
CPQ91_21840	COG5002	protein histidine kinase activity
CPQ91_21845	COG0745	RESPONSE REGULATOR receiver
CPQ91_21875	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CPQ91_21885	COG0305	Participates in initiation and elongation during chromosome replication
CPQ91_21900	COG3093	addiction module antidote protein HigA
CPQ91_21905	COG2807	transmembrane transport
CPQ91_21910	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CPQ91_21915	COG0363	glucosamine-6-phosphate deaminase activity
CPQ91_21925	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CPQ91_21930	COG1263	PTS System
CPQ91_21930	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CPQ91_21935	COG0359	binds to the 23S rRNA
CPQ91_21940	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
CPQ91_21945	COG4241	membrane
CPQ91_21960	COG0589	response to stress
CPQ91_21965	COG0659	secondary active sulfate transmembrane transporter activity
CPQ91_21970	COG2271	Major facilitator Superfamily
CPQ91_21975	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CPQ91_21980	COG0629	single-stranded DNA binding
CPQ91_21985	COG0360	Binds together with S18 to 16S ribosomal RNA
CPQ91_21990	COG0012	GTP binding
CPQ91_22000	COG4481	Protein conserved in bacteria
CPQ91_22005	COG3949	Membrane
CPQ91_22015	COG1475	DNA binding
CPQ91_22020	COG1192	Involved in chromosome partitioning
CPQ91_22025	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CPQ91_22035	COG1475	DNA binding
CPQ91_22040	COG0357	Ribosomal RNA small subunit methyltransferase G
CPQ91_22045	COG0445	tRNA wobble uridine modification
CPQ91_22050	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CPQ91_22055	COG1847	R3H domain protein
CPQ91_22060	COG0706	membrane insertase activity
CPQ91_22065	COG0594	ribonuclease P activity
CPQ91_22070	COG0230	Belongs to the bacterial ribosomal protein bL34 family