locus-tag class description JAV55_00005 PF11638 DnaA N-terminal domain JAV55_00005 PF08299 Bacterial dnaA protein helix-turn-helix JAV55_00005 PF00308 Bacterial dnaA protein JAV55_00010 PF02767 DNA polymerase III beta subunit, central domain JAV55_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JAV55_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JAV55_00020 PF02463 RecF/RecN/SMC N terminal domain JAV55_00025 PF04025 Domain of unknown function (DUF370) JAV55_00030 PF00204 DNA gyrase B JAV55_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_00030 PF01751 Toprim domain JAV55_00030 PF00986 DNA gyrase B subunit, carboxyl terminus JAV55_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A JAV55_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller JAV55_00065 PF14175 YaaC-like Protein JAV55_00070 PF00478 IMP dehydrogenase / GMP reductase domain JAV55_00070 PF00571 CBS domain JAV55_00075 PF00768 D-alanyl-D-alanine carboxypeptidase JAV55_00075 PF07943 Penicillin-binding protein 5, C-terminal domain JAV55_00080 PF01680 SOR/SNZ family JAV55_00085 PF01174 SNO glutamine amidotransferase family JAV55_00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JAV55_00090 PF02403 Seryl-tRNA synthetase N-terminal domain JAV55_00095 PF02595 Glycerate kinase family JAV55_00100 PF02447 GntP family permease JAV55_00105 PF17853 GGDEF-like domain JAV55_00105 PF05651 Putative sugar diacid recognition JAV55_00105 PF13556 PucR C-terminal helix-turn-helix domain JAV55_00120 PF01712 Deoxynucleoside kinase JAV55_00125 PF01712 Deoxynucleoside kinase JAV55_00130 PF01476 LysM domain JAV55_00130 PF00704 Glycosyl hydrolases family 18 JAV55_00135 PF00857 Isochorismatase family JAV55_00140 PF14437 MafB19-like deaminase JAV55_00150 PF12169 DNA polymerase III subunits gamma and tau domain III JAV55_00155 PF02575 YbaB/EbfC DNA-binding family JAV55_00160 PF13662 Toprim domain JAV55_00160 PF02132 RecR protein JAV55_00165 PF10704 Protein of unknown function (DUF2508) JAV55_00170 PF07441 SigmaK-factor processing regulatory protein BofA JAV55_00200 PF10764 Inhibitor of sigma-G Gin JAV55_00205 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein JAV55_00210 PF05816 Toxic anion resistance protein (TelA) JAV55_00215 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JAV55_00215 PF01276 Orn/Lys/Arg decarboxylase, major domain JAV55_00220 PF02223 Thymidylate kinase JAV55_00225 PF06153 Cyclic-di-AMP receptor JAV55_00230 PF03885 Protein of unknown function (DUF327) JAV55_00235 PF09115 DNA polymerase III, delta subunit, C terminal JAV55_00240 PF04468 PSP1 C-terminal conserved region JAV55_00245 PF06156 Initiation control protein YabA JAV55_00250 PF05175 Methyltransferase small domain JAV55_00255 PF01541 GIY-YIG catalytic domain JAV55_00260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JAV55_00265 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JAV55_00265 PF18277 AbrB C-terminal domain JAV55_00270 PF08264 Anticodon-binding domain of tRNA JAV55_00270 PF01588 Putative tRNA binding domain JAV55_00270 PF09334 tRNA synthetases class I (M) JAV55_00275 PF01026 TatD related DNase JAV55_00280 PF06725 3D domain JAV55_00280 PF03990 G5-linked-Ubiquitin-like domain JAV55_00280 PF07501 G5 domain JAV55_00285 PF13331 Domain of unknown function (DUF4093) JAV55_00285 PF13662 Toprim domain JAV55_00290 PF00398 Ribosomal RNA adenine dimethylase JAV55_00295 PF05582 YabG peptidase U57 JAV55_00300 PF06257 Biofilm formation stimulator VEG JAV55_00305 PF00269 Small, acid-soluble spore proteins, alpha/beta type JAV55_00310 PF00288 GHMP kinases N terminal domain JAV55_00310 PF08544 GHMP kinases C terminal JAV55_00315 PF00156 Phosphoribosyl transferase domain JAV55_00315 PF09182 Bacterial purine repressor, N-terminal JAV55_00320 PF01042 Endoribonuclease L-PSP JAV55_00325 PF04026 SpoVG JAV55_00330 PF00483 Nucleotidyl transferase JAV55_00330 PF00132 Bacterial transferase hexapeptide (six repeats) JAV55_00335 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JAV55_00335 PF14572 Phosphoribosyl synthetase-associated domain JAV55_00340 PF14693 Ribosomal protein TL5, C-terminal domain JAV55_00340 PF01386 Ribosomal L25p family JAV55_00345 PF01195 Peptidyl-tRNA hydrolase JAV55_00350 PF10955 Protein of unknown function (DUF2757) JAV55_00355 PF02559 CarD-like/TRCF domain JAV55_00355 PF00270 DEAD/DEAH box helicase JAV55_00355 PF00271 Helicase conserved C-terminal domain JAV55_00355 PF03461 TRCF domain JAV55_00355 PF17757 UvrB interaction domain JAV55_00360 PF15714 Stage V sporulation protein T C-terminal, transcription factor JAV55_00360 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JAV55_00365 PF01943 Polysaccharide biosynthesis protein JAV55_00365 PF14667 Polysaccharide biosynthesis C-terminal domain JAV55_00370 PF03819 MazG nucleotide pyrophosphohydrolase domain JAV55_00370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JAV55_00375 PF01479 S4 domain JAV55_00380 PF07873 YabP family JAV55_00385 PF09578 Spore cortex protein YabQ (Spore_YabQ) JAV55_00390 PF04977 Septum formation initiator JAV55_00395 PF00575 S1 RNA binding domain JAV55_00410 PF07228 Stage II sporulation protein E (SpoIIE) JAV55_00415 PF00092 von Willebrand factor type A domain JAV55_00420 PF00069 Protein kinase domain JAV55_00425 PF11734 TilS substrate C-terminal domain JAV55_00425 PF09179 TilS substrate binding domain JAV55_00425 PF01171 PP-loop family JAV55_00430 PF00156 Phosphoribosyl transferase domain JAV55_00435 PF06480 FtsH Extracellular JAV55_00435 PF00004 ATPase family associated with various cellular activities (AAA) JAV55_00435 PF17862 AAA+ lid domain JAV55_00435 PF01434 Peptidase family M41 JAV55_00440 PF03309 Type III pantothenate kinase JAV55_00445 PF01430 Hsp33 protein JAV55_00450 PF13145 PPIC-type PPIASE domain JAV55_00455 PF00291 Pyridoxal-phosphate dependent enzyme JAV55_00460 PF00425 chorismate binding enzyme JAV55_00460 PF04715 Anthranilate synthase component I, N terminal region JAV55_00465 PF00117 Glutamine amidotransferase class-I JAV55_00470 PF01063 Amino-transferase class IV JAV55_00475 PF00809 Pterin binding enzyme JAV55_00480 PF02152 Dihydroneopterin aldolase JAV55_00485 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JAV55_00490 PF01381 Helix-turn-helix JAV55_00495 PF01207 Dihydrouridine synthase (Dus) JAV55_00500 PF01336 OB-fold nucleic acid binding domain JAV55_00500 PF00152 tRNA synthetases class II (D, K and N) JAV55_00580 PF05848 CtsR N-terminal HTH domain JAV55_00580 PF17727 CtsR C-terminal dimerization domain JAV55_00585 PF02151 UvrB/uvrC motif JAV55_00590 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain JAV55_00595 PF00004 ATPase family associated with various cellular activities (AAA) JAV55_00595 PF10431 C-terminal, D2-small domain, of ClpB protein JAV55_00595 PF02861 Clp amino terminal domain, pathogenicity island component JAV55_00595 PF17871 AAA lid domain JAV55_00595 PF07724 AAA domain (Cdc48 subfamily) JAV55_00600 PF18073 Rubredoxin metal binding domain JAV55_00605 PF02457 DisA bacterial checkpoint controller nucleotide-binding JAV55_00605 PF10635 DisA bacterial checkpoint controller linker region JAV55_00615 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JAV55_00620 PF02542 YgbB family JAV55_00625 PF00749 tRNA synthetases class I (E and Q), catalytic domain JAV55_00630 PF00132 Bacterial transferase hexapeptide (six repeats) JAV55_00635 PF01406 tRNA synthetases class I (C) catalytic domain JAV55_00635 PF09190 DALR domain JAV55_00640 PF00636 Ribonuclease III domain JAV55_00645 PF00588 SpoU rRNA Methylase family JAV55_00645 PF08032 RNA 2'-O ribose methyltransferase substrate binding JAV55_00650 PF05991 YacP-like NYN domain JAV55_00655 PF04542 Sigma-70 region 2 JAV55_00655 PF08281 Sigma-70, region 4 JAV55_00660 PF00471 Ribosomal protein L33 JAV55_00665 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JAV55_00670 PF02357 Transcription termination factor nusG JAV55_00670 PF00467 KOW motif JAV55_00675 PF03946 Ribosomal protein L11, N-terminal domain JAV55_00675 PF00298 Ribosomal protein L11, RNA binding domain JAV55_00680 PF00687 Ribosomal protein L1p/L10e family JAV55_00685 PF00466 Ribosomal protein L10 JAV55_00690 PF00542 Ribosomal protein L7/L12 C-terminal domain JAV55_00690 PF16320 Ribosomal protein L7/L12 dimerisation domain JAV55_00695 PF05175 Methyltransferase small domain JAV55_00700 PF00562 RNA polymerase Rpb2, domain 6 JAV55_00700 PF10385 RNA polymerase beta subunit external 1 domain JAV55_00700 PF04565 RNA polymerase Rpb2, domain 3 JAV55_00700 PF04560 RNA polymerase Rpb2, domain 7 JAV55_00700 PF04563 RNA polymerase beta subunit JAV55_00700 PF04561 RNA polymerase Rpb2, domain 2 JAV55_00705 PF05000 RNA polymerase Rpb1, domain 4 JAV55_00705 PF00623 RNA polymerase Rpb1, domain 2 JAV55_00705 PF04997 RNA polymerase Rpb1, domain 1 JAV55_00705 PF04983 RNA polymerase Rpb1, domain 3 JAV55_00705 PF04998 RNA polymerase Rpb1, domain 5 JAV55_00710 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JAV55_00715 PF00164 Ribosomal protein S12/S23 JAV55_00720 PF00177 Ribosomal protein S7p/S5e JAV55_00725 PF03144 Elongation factor Tu domain 2 JAV55_00725 PF00009 Elongation factor Tu GTP binding domain JAV55_00725 PF03764 Elongation factor G, domain IV JAV55_00725 PF14492 Elongation Factor G, domain II JAV55_00725 PF00679 Elongation factor G C-terminus JAV55_00730 PF00009 Elongation factor Tu GTP binding domain JAV55_00730 PF03144 Elongation factor Tu domain 2 JAV55_00730 PF03143 Elongation factor Tu C-terminal domain JAV55_00735 PF00338 Ribosomal protein S10p/S20e JAV55_00740 PF00297 Ribosomal protein L3 JAV55_00745 PF00573 Ribosomal protein L4/L1 family JAV55_00750 PF00276 Ribosomal protein L23 JAV55_00755 PF03947 Ribosomal Proteins L2, C-terminal domain JAV55_00755 PF00181 Ribosomal Proteins L2, RNA binding domain JAV55_00760 PF00203 Ribosomal protein S19 JAV55_00765 PF00237 Ribosomal protein L22p/L17e JAV55_00770 PF00189 Ribosomal protein S3, C-terminal domain JAV55_00770 PF07650 KH domain JAV55_00775 PF00252 Ribosomal protein L16p/L10e JAV55_00780 PF00831 Ribosomal L29 protein JAV55_00785 PF00366 Ribosomal protein S17 JAV55_00790 PF00238 Ribosomal protein L14p/L23e JAV55_00795 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JAV55_00795 PF00467 KOW motif JAV55_00800 PF00281 Ribosomal protein L5 JAV55_00800 PF00673 ribosomal L5P family C-terminus JAV55_00805 PF00253 Ribosomal protein S14p/S29e JAV55_00810 PF00410 Ribosomal protein S8 JAV55_00815 PF00347 Ribosomal protein L6 JAV55_00820 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JAV55_00825 PF03719 Ribosomal protein S5, C-terminal domain JAV55_00825 PF00333 Ribosomal protein S5, N-terminal domain JAV55_00830 PF00327 Ribosomal protein L30p/L7e JAV55_00835 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JAV55_00840 PF00344 SecY translocase JAV55_00845 PF05191 Adenylate kinase, active site lid JAV55_00850 PF00557 Metallopeptidase family M24 JAV55_00860 PF01176 Translation initiation factor 1A / IF-1 JAV55_00865 PF00444 Ribosomal protein L36 JAV55_00870 PF00416 Ribosomal protein S13/S18 JAV55_00875 PF00411 Ribosomal protein S11 JAV55_00880 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JAV55_00880 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JAV55_00880 PF01000 RNA polymerase Rpb3/RpoA insert domain JAV55_00885 PF01196 Ribosomal protein L17 JAV55_00890 PF00005 ABC transporter JAV55_00895 PF00005 ABC transporter JAV55_00900 PF02361 Cobalt transport protein JAV55_00905 PF01416 tRNA pseudouridine synthase JAV55_00910 PF00572 Ribosomal protein L13 JAV55_00915 PF00380 Ribosomal protein S9/S16 JAV55_00920 PF05163 DinB family JAV55_00925 PF10730 Protein of unknown function (DUF2521) JAV55_00930 PF01520 N-acetylmuramoyl-L-alanine amidase JAV55_00935 PF10609 NUBPL iron-transfer P-loop NTPase JAV55_00940 PF17898 Spore germination GerD central core domain JAV55_00945 PF14089 KinB-signalling pathway activation in sporulation JAV55_00950 PF01522 Polysaccharide deacetylase JAV55_00980 PF00144 Beta-lactamase JAV55_00990 PF01758 Sodium Bile acid symporter family JAV55_00995 PF17369 Family of unknown function (DUF5391) JAV55_01005 PF07075 Protein of unknown function (DUF1343) JAV55_01010 PF00933 Glycosyl hydrolase family 3 N terminal domain JAV55_01010 PF01915 Glycosyl hydrolase family 3 C-terminal domain JAV55_01015 PF00144 Beta-lactamase JAV55_01020 PF00367 phosphotransferase system, EIIB JAV55_01020 PF02378 Phosphotransferase system, EIIC JAV55_01025 PF01418 Helix-turn-helix domain, rpiR family JAV55_01025 PF01380 SIS domain JAV55_01030 PF01380 SIS domain JAV55_01035 PF04463 Protein of unknown function (DUF523) JAV55_01065 PF00491 Arginase family JAV55_01070 PF08281 Sigma-70, region 4 JAV55_01070 PF04542 Sigma-70 region 2 JAV55_01075 PF13490 Putative zinc-finger JAV55_01080 PF02457 DisA bacterial checkpoint controller nucleotide-binding JAV55_01085 PF07949 YbbR-like protein JAV55_01090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JAV55_01090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JAV55_01090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JAV55_01090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JAV55_01095 PF01380 SIS domain JAV55_01110 PF00005 ABC transporter JAV55_01115 PF00392 Bacterial regulatory proteins, gntR family JAV55_01125 PF07690 Major Facilitator Superfamily JAV55_01135 PF00664 ABC transporter transmembrane region JAV55_01135 PF00005 ABC transporter JAV55_01140 PF01323 DSBA-like thioredoxin domain JAV55_01155 PF04439 Streptomycin adenylyltransferase JAV55_01165 PF13419 Haloacid dehalogenase-like hydrolase JAV55_01170 PF00324 Amino acid permease JAV55_01175 PF03600 Citrate transporter JAV55_01180 PF03401 Tripartite tricarboxylate transporter family receptor JAV55_01185 PF12431 Transcriptional regulator JAV55_01185 PF08279 HTH domain JAV55_01185 PF00072 Response regulator receiver domain JAV55_01190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_01190 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JAV55_01195 PF03466 LysR substrate binding domain JAV55_01195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JAV55_01205 PF07690 Major Facilitator Superfamily JAV55_01210 PF17334 Minor curli fiber component A JAV55_01215 PF17340 Family of unknown function (DUF5370) JAV55_01225 PF03190 Protein of unknown function, DUF255 JAV55_01250 PF12671 Putative amidase domain JAV55_01265 PF03190 Protein of unknown function, DUF255 JAV55_01270 PF07690 Major Facilitator Superfamily JAV55_01275 PF08241 Methyltransferase domain JAV55_01290 PF02690 Na+/Pi-cotransporter JAV55_01295 PF05360 yiaA/B two helix domain JAV55_01320 PF00892 EamA-like transporter family JAV55_01325 PF12833 Helix-turn-helix domain JAV55_01325 PF02311 AraC-like ligand binding domain JAV55_01345 PF00465 Iron-containing alcohol dehydrogenase JAV55_01350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JAV55_01350 PF00672 HAMP domain JAV55_01350 PF12729 Four helix bundle sensory module for signal transduction JAV55_01355 PF13407 Periplasmic binding protein domain JAV55_01375 PF10710 Protein of unknown function (DUF2512) JAV55_01380 PF00324 Amino acid permease JAV55_01385 PF02574 Homocysteine S-methyltransferase JAV55_01390 PF04794 YdjC-like protein JAV55_01395 PF02378 Phosphotransferase system, EIIC JAV55_01395 PF00367 phosphotransferase system, EIIB JAV55_01395 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JAV55_01400 PF13411 MerR HTH family regulatory protein JAV55_01400 PF07739 TipAS antibiotic-recognition domain JAV55_01405 PF04239 Protein of unknown function (DUF421) JAV55_01410 PF00132 Bacterial transferase hexapeptide (six repeats) JAV55_01410 PF00101 Ribulose bisphosphate carboxylase, small chain JAV55_01415 PF10990 Protein of unknown function (DUF2809) JAV55_01420 PF01235 Sodium:alanine symporter family JAV55_01425 PF04960 Glutaminase JAV55_01430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_01435 PF08664 YcbB domain JAV55_01435 PF00072 Response regulator receiver domain JAV55_01440 PF13302 Acetyltransferase (GNAT) domain JAV55_01445 PF05569 BlaR1 peptidase M56 JAV55_01445 PF00905 Penicillin binding protein transpeptidase domain JAV55_01450 PF03965 Penicillinase repressor JAV55_01460 PF16655 PhoD-like phosphatase, N-terminal domain JAV55_01460 PF09423 PhoD-like phosphatase JAV55_01465 PF02416 mttA/Hcf106 family JAV55_01470 PF00902 Sec-independent protein translocase protein (TatC) JAV55_01475 PF00701 Dihydrodipicolinate synthetase family JAV55_01480 PF00171 Aldehyde dehydrogenase family JAV55_01485 PF07690 Major Facilitator Superfamily JAV55_01490 PF13378 Enolase C-terminal domain-like JAV55_01495 PF00392 Bacterial regulatory proteins, gntR family JAV55_01495 PF07729 FCD domain JAV55_01500 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JAV55_01500 PF08666 SAF domain JAV55_01505 PF00486 Transcriptional regulatory protein, C terminal JAV55_01505 PF00072 Response regulator receiver domain JAV55_01510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_01510 PF00512 His Kinase A (phospho-acceptor) domain JAV55_01515 PF00005 ABC transporter JAV55_01530 PF13037 Domain of unknown function (DUF3898) JAV55_01530 PF13039 Protein of unknown function (DUF3900) JAV55_01535 PF16226 Domain of unknown function (DUF4885) JAV55_01540 PF01636 Phosphotransferase enzyme family JAV55_01545 PF01047 MarR family JAV55_01550 PF13193 AMP-binding enzyme C-terminal domain JAV55_01550 PF00501 AMP-binding enzyme JAV55_01570 PF07739 TipAS antibiotic-recognition domain JAV55_01570 PF13411 MerR HTH family regulatory protein JAV55_01580 PF13847 Methyltransferase domain JAV55_01580 PF03551 Transcriptional regulator PadR-like family JAV55_01590 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein JAV55_01595 PF00892 EamA-like transporter family JAV55_01600 PF06271 RDD family JAV55_01605 PF02810 SEC-C motif JAV55_01605 PF05225 helix-turn-helix, Psq domain JAV55_01610 PF00005 ABC transporter JAV55_01625 PF00486 Transcriptional regulatory protein, C terminal JAV55_01625 PF00072 Response regulator receiver domain JAV55_01630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_01630 PF00512 His Kinase A (phospho-acceptor) domain JAV55_01635 PF03466 LysR substrate binding domain JAV55_01635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JAV55_01640 PF14552 Tautomerase enzyme JAV55_01655 PF11611 Domain of unknown function (DUF4352) JAV55_01655 PF17118 Domain of unknown function (DUF5105) JAV55_01660 PF03606 C4-dicarboxylate anaerobic carrier JAV55_01665 PF01546 Peptidase family M20/M25/M40 JAV55_01665 PF07687 Peptidase dimerisation domain JAV55_01670 PF00583 Acetyltransferase (GNAT) family JAV55_01675 PF01425 Amidase JAV55_01680 PF01432 Peptidase family M3 JAV55_01680 PF08439 Oligopeptidase F JAV55_01685 PF04226 Transglycosylase associated protein JAV55_01695 PF13183 4Fe-4S dicluster domain JAV55_01695 PF02754 Cysteine-rich domain JAV55_01700 PF02913 FAD linked oxidases, C-terminal domain JAV55_01700 PF01565 FAD binding domain JAV55_01705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JAV55_01710 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JAV55_01715 PF02378 Phosphotransferase system, EIIC JAV55_01720 PF02056 Family 4 glycosyl hydrolase JAV55_01720 PF11975 Family 4 glycosyl hydrolase C-terminal domain JAV55_01725 PF07702 UTRA domain JAV55_01725 PF00392 Bacterial regulatory proteins, gntR family JAV55_01730 PF04794 YdjC-like protein JAV55_01735 PF00041 Fibronectin type III domain JAV55_01735 PF00704 Glycosyl hydrolases family 18 JAV55_01740 PF06483 Chitinase C JAV55_01740 PF00704 Glycosyl hydrolases family 18 JAV55_01745 PF00089 Trypsin JAV55_01760 PF16244 Domain of unknown function (DUF4901) JAV55_01765 PF00581 Rhodanese-like domain JAV55_01770 PF07486 Cell Wall Hydrolase JAV55_01775 PF00296 Luciferase-like monooxygenase JAV55_01780 PF00877 NlpC/P60 family JAV55_01790 PF00005 ABC transporter JAV55_01790 PF13732 Domain of unknown function (DUF4162) JAV55_01795 PF00440 Bacterial regulatory proteins, tetR family JAV55_01795 PF17932 Tetracyclin repressor-like, C-terminal domain JAV55_01815 PF02342 TerD domain JAV55_01820 PF02342 TerD domain JAV55_01825 PF02342 TerD domain JAV55_01830 PF03741 Integral membrane protein TerC family JAV55_01845 PF14266 Putative component of 'biosynthetic module' JAV55_01850 PF05816 Toxic anion resistance protein (TelA) JAV55_01855 PF02683 Cytochrome C biogenesis protein transmembrane region JAV55_01865 PF13411 MerR HTH family regulatory protein JAV55_01870 PF07690 Major Facilitator Superfamily JAV55_01875 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JAV55_01875 PF00056 lactate/malate dehydrogenase, NAD binding domain JAV55_01880 PF02652 L-lactate permease JAV55_01885 PF01810 LysE type translocator JAV55_01890 PF00324 Amino acid permease JAV55_01895 PF02540 NAD synthase JAV55_01900 PF01202 Shikimate kinase JAV55_01905 PF10127 RNA repair pathway DNA polymerase beta family JAV55_01910 PF01619 Proline dehydrogenase JAV55_01915 PF00171 Aldehyde dehydrogenase family JAV55_01920 PF00474 Sodium:solute symporter family JAV55_01925 PF13556 PucR C-terminal helix-turn-helix domain JAV55_01925 PF17853 GGDEF-like domain JAV55_01930 PF09323 Domain of unknown function (DUF1980) JAV55_01935 PF03773 Predicted permease JAV55_01940 PF05448 Acetyl xylan esterase (AXE1) JAV55_01960 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_01965 PF00497 Bacterial extracellular solute-binding proteins, family 3 JAV55_01970 PF02525 Flavodoxin-like fold JAV55_01980 PF00232 Glycosyl hydrolase family 1 JAV55_01985 PF11033 Competence protein J (ComJ) JAV55_01990 PF14040 Deoxyribonuclease NucA/NucB JAV55_02000 PF00069 Protein kinase domain JAV55_02010 PF04740 LXG domain of WXG superfamily JAV55_02015 PF01968 Hydantoinase/oxoprolinase JAV55_02015 PF05378 Hydantoinase/oxoprolinase N-terminal region JAV55_02020 PF02538 Hydantoinase B/oxoprolinase JAV55_02030 PF08402 TOBE domain JAV55_02030 PF00005 ABC transporter JAV55_02035 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_02040 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_02045 PF00550 Phosphopantetheine attachment site JAV55_02045 PF00668 Condensation domain JAV55_02045 PF13193 AMP-binding enzyme C-terminal domain JAV55_02045 PF00501 AMP-binding enzyme JAV55_02050 PF00550 Phosphopantetheine attachment site JAV55_02050 PF00668 Condensation domain JAV55_02050 PF13193 AMP-binding enzyme C-terminal domain JAV55_02050 PF00501 AMP-binding enzyme JAV55_02055 PF00668 Condensation domain JAV55_02055 PF13193 AMP-binding enzyme C-terminal domain JAV55_02055 PF00550 Phosphopantetheine attachment site JAV55_02055 PF00975 Thioesterase domain JAV55_02055 PF00501 AMP-binding enzyme JAV55_02060 PF00975 Thioesterase domain JAV55_02065 PF00892 EamA-like transporter family JAV55_02070 PF00155 Aminotransferase class I and II JAV55_02070 PF00392 Bacterial regulatory proteins, gntR family JAV55_02075 PF01648 4'-phosphopantetheinyl transferase superfamily JAV55_02080 PF00756 Putative esterase JAV55_02100 PF00005 ABC transporter JAV55_02125 PF00672 HAMP domain JAV55_02125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JAV55_02130 PF00005 ABC transporter JAV55_02135 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_02140 PF00497 Bacterial extracellular solute-binding proteins, family 3 JAV55_02145 PF13426 PAS domain JAV55_02145 PF02954 Bacterial regulatory protein, Fis family JAV55_02145 PF00158 Sigma-54 interaction domain JAV55_02150 PF00202 Aminotransferase class-III JAV55_02155 PF00324 Amino acid permease JAV55_02160 PF00491 Arginase family JAV55_02165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JAV55_02165 PF03466 LysR substrate binding domain JAV55_02170 PF02441 Flavoprotein JAV55_02175 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JAV55_02220 PF14449 Pre-toxin TG JAV55_02220 PF04740 LXG domain of WXG superfamily JAV55_02240 PF02743 Cache domain JAV55_02240 PF00672 HAMP domain JAV55_02240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_02240 PF06580 Histidine kinase JAV55_02245 PF12833 Helix-turn-helix domain JAV55_02245 PF00072 Response regulator receiver domain JAV55_02250 PF13407 Periplasmic binding protein domain JAV55_02255 PF00005 ABC transporter JAV55_02260 PF02653 Branched-chain amino acid transport system / permease component JAV55_02265 PF07690 Major Facilitator Superfamily JAV55_02270 PF01047 MarR family JAV55_02270 PF00583 Acetyltransferase (GNAT) family JAV55_02275 PF02449 Beta-galactosidase JAV55_02275 PF08532 Beta-galactosidase trimerisation domain JAV55_02275 PF08533 Beta-galactosidase C-terminal domain JAV55_02280 PF02333 Phytase JAV55_02285 PF00854 POT family JAV55_02290 PF12708 Pectate lyase superfamily protein JAV55_02290 PF13229 Right handed beta helix region JAV55_02300 PF03323 Bacillus/Clostridium GerA spore germination protein JAV55_02305 PF05504 Spore germination B3/ GerAC like, C-terminal JAV55_02310 PF03845 Spore germination protein JAV55_02320 PF00005 ABC transporter JAV55_02325 PF02687 FtsX-like permease family JAV55_02325 PF12704 MacB-like periplasmic core domain JAV55_02330 PF00486 Transcriptional regulatory protein, C terminal JAV55_02330 PF00072 Response regulator receiver domain JAV55_02335 PF00512 His Kinase A (phospho-acceptor) domain JAV55_02335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_02335 PF00672 HAMP domain JAV55_02340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JAV55_02340 PF02743 Cache domain JAV55_02340 PF00672 HAMP domain JAV55_02345 PF00696 Amino acid kinase family JAV55_02345 PF13840 ACT domain JAV55_02350 PF01032 FecCD transport family JAV55_02355 PF01032 FecCD transport family JAV55_02360 PF00005 ABC transporter JAV55_02365 PF01497 Periplasmic binding protein JAV55_02370 PF07690 Major Facilitator Superfamily JAV55_02375 PF00440 Bacterial regulatory proteins, tetR family JAV55_02385 PF00881 Nitroreductase family JAV55_02390 PF03992 Antibiotic biosynthesis monooxygenase JAV55_02395 PF01022 Bacterial regulatory protein, arsR family JAV55_02400 PF00155 Aminotransferase class I and II JAV55_02400 PF00392 Bacterial regulatory proteins, gntR family JAV55_02405 PF00202 Aminotransferase class-III JAV55_02410 PF13520 Amino acid permease JAV55_02415 PF00171 Aldehyde dehydrogenase family JAV55_02420 PF00892 EamA-like transporter family JAV55_02430 PF07987 Domain of unkown function (DUF1775) JAV55_02435 PF04234 CopC domain JAV55_02435 PF05425 Copper resistance protein D JAV55_02435 PF13115 YtkA-like JAV55_02440 PF08220 DeoR-like helix-turn-helix domain JAV55_02440 PF05573 NosL JAV55_02445 PF04324 BFD-like [2Fe-2S] binding domain JAV55_02445 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JAV55_02445 PF07992 Pyridine nucleotide-disulphide oxidoreductase JAV55_02445 PF18267 Rubredoxin NAD+ reductase C-terminal domain JAV55_02450 PF01568 Molydopterin dinucleotide binding domain JAV55_02450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JAV55_02450 PF00384 Molybdopterin oxidoreductase JAV55_02455 PF04324 BFD-like [2Fe-2S] binding domain JAV55_02455 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JAV55_02455 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JAV55_02455 PF07992 Pyridine nucleotide-disulphide oxidoreductase JAV55_02455 PF18267 Rubredoxin NAD+ reductase C-terminal domain JAV55_02460 PF00355 Rieske [2Fe-2S] domain JAV55_02465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JAV55_02470 PF00392 Bacterial regulatory proteins, gntR family JAV55_02470 PF07729 FCD domain JAV55_02475 PF00939 Sodium:sulfate symporter transmembrane region JAV55_02480 PF07977 FabA-like domain JAV55_02485 PF07977 FabA-like domain JAV55_02490 PF01980 tRNA-methyltransferase O JAV55_02495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JAV55_02510 PF00456 Transketolase, thiamine diphosphate binding domain JAV55_02515 PF02780 Transketolase, C-terminal domain JAV55_02515 PF02779 Transketolase, pyrimidine binding domain JAV55_02525 PF03746 LamB/YcsF family JAV55_02530 PF01566 Natural resistance-associated macrophage protein JAV55_02535 PF07286 Protein of unknown function (DUF1445) JAV55_02540 PF02682 Carboxyltransferase domain, subdomain C and D JAV55_02545 PF02626 Carboxyltransferase domain, subdomain A and B JAV55_02550 PF01614 Bacterial transcriptional regulator JAV55_02550 PF09339 IclR helix-turn-helix domain JAV55_02555 PF13472 GDSL-like Lipase/Acylhydrolase family JAV55_02560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JAV55_02560 PF02378 Phosphotransferase system, EIIC JAV55_02565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JAV55_02570 PF01232 Mannitol dehydrogenase Rossmann domain JAV55_02570 PF08125 Mannitol dehydrogenase C-terminal domain JAV55_02575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JAV55_02575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JAV55_02575 PF00874 PRD domain JAV55_02575 PF05043 Mga helix-turn-helix domain JAV55_02575 PF08279 HTH domain JAV55_02595 PF16242 Pyridoxamine 5'-phosphate oxidase like JAV55_02600 PF10997 Alternate to MurJ JAV55_02605 PF03816 Cell envelope-related transcriptional attenuator domain JAV55_02610 PF12823 Domain of unknown function (DUF3817) JAV55_02620 PF01037 Lrp/AsnC ligand binding domain JAV55_02625 PF01131 DNA topoisomerase JAV55_02625 PF01751 Toprim domain JAV55_02630 PF13520 Amino acid permease JAV55_02635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JAV55_02635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JAV55_02635 PF00205 Thiamine pyrophosphate enzyme, central domain JAV55_02640 PF18416 N-acetylglucosamine binding protein domain 2 JAV55_02640 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JAV55_02650 PF13302 Acetyltransferase (GNAT) domain JAV55_02655 PF01566 Natural resistance-associated macrophage protein JAV55_02660 PF04226 Transglycosylase associated protein JAV55_02665 PF10415 Fumarase C C-terminus JAV55_02665 PF00206 Lyase JAV55_02670 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JAV55_02675 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) JAV55_02680 PF12787 EcsC protein family JAV55_02690 PF07883 Cupin domain JAV55_02695 PF10685 Stress-induced bacterial acidophilic repeat motif JAV55_02695 PF00477 Small hydrophilic plant seed protein JAV55_02700 PF01594 AI-2E family transporter JAV55_02705 PF00375 Sodium:dicarboxylate symporter family JAV55_02710 PF00005 ABC transporter JAV55_02725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JAV55_02725 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JAV55_02725 PF02770 Acyl-CoA dehydrogenase, middle domain JAV55_02730 PF13040 Fur-regulated basic protein B JAV55_02740 PF00085 Thioredoxin JAV55_02745 PF07478 D-ala D-ala ligase C-terminus JAV55_02745 PF01820 D-ala D-ala ligase N-terminus JAV55_02750 PF08245 Mur ligase middle domain JAV55_02750 PF01225 Mur ligase family, catalytic domain JAV55_02750 PF02875 Mur ligase family, glutamate ligase domain JAV55_02755 PF12146 Serine aminopeptidase, S33 JAV55_02760 PF00270 DEAD/DEAH box helicase JAV55_02760 PF00271 Helicase conserved C-terminal domain JAV55_02765 PF03703 Bacterial PH domain JAV55_02770 PF03703 Bacterial PH domain JAV55_02775 PF01694 Rhomboid family JAV55_02785 PF01168 Alanine racemase, N-terminal domain JAV55_02785 PF00842 Alanine racemase, C-terminal domain JAV55_02790 PF01402 Ribbon-helix-helix protein, copG family JAV55_02795 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JAV55_02800 PF01740 STAS domain JAV55_02800 PF08678 Rsbr N terminal JAV55_02805 PF01740 STAS domain JAV55_02810 PF13581 Histidine kinase-like ATPase domain JAV55_02815 PF07228 Stage II sporulation protein E (SpoIIE) JAV55_02815 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain JAV55_02820 PF01740 STAS domain JAV55_02825 PF13581 Histidine kinase-like ATPase domain JAV55_02830 PF04542 Sigma-70 region 2 JAV55_02830 PF04539 Sigma-70 region 3 JAV55_02830 PF04545 Sigma-70, region 4 JAV55_02835 PF07228 Stage II sporulation protein E (SpoIIE) JAV55_02840 PF16921 Tex protein YqgF-like domain JAV55_02840 PF00575 S1 RNA binding domain JAV55_02840 PF17674 HHH domain JAV55_02840 PF09371 Tex-like protein N-terminal domain JAV55_02845 PF00440 Bacterial regulatory proteins, tetR family JAV55_02850 PF03176 MMPL family JAV55_02860 PF10263 SprT-like family JAV55_02905 PF01381 Helix-turn-helix JAV55_02910 PF00487 Fatty acid desaturase JAV55_02915 PF00313 'Cold-shock' DNA-binding domain JAV55_02920 PF08240 Alcohol dehydrogenase GroES-like domain JAV55_02920 PF00107 Zinc-binding dehydrogenase JAV55_02930 PF01047 MarR family JAV55_02935 PF00583 Acetyltransferase (GNAT) family JAV55_02940 PF04299 Putative FMN-binding domain JAV55_02950 PF01638 HxlR-like helix-turn-helix JAV55_02955 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JAV55_02955 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JAV55_02980 PF04199 Putative cyclase JAV55_02985 PF00324 Amino acid permease JAV55_03000 PF04542 Sigma-70 region 2 JAV55_03000 PF08281 Sigma-70, region 4 JAV55_03005 PF13739 Deacetylase PdaC JAV55_03005 PF11738 Protein of unknown function (DUF3298) JAV55_03010 PF01757 Acyltransferase family JAV55_03015 PF07690 Major Facilitator Superfamily JAV55_03020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_03020 PF06580 Histidine kinase JAV55_03025 PF04397 LytTr DNA-binding domain JAV55_03025 PF00072 Response regulator receiver domain JAV55_03030 PF00746 LPXTG cell wall anchor motif JAV55_03030 PF17210 SdrD B-like domain JAV55_03030 PF17961 Bacterial Ig domain JAV55_03030 PF04650 YSIRK type signal peptide JAV55_03030 PF10425 C-terminus of bacterial fibrinogen-binding adhesin JAV55_03035 PF04203 Sortase domain JAV55_03040 PF00083 Sugar (and other) transporter JAV55_03080 PF00586 AIR synthase related protein, N-terminal domain JAV55_03080 PF02769 AIR synthase related protein, C-terminal domain JAV55_03085 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JAV55_03090 PF00814 Glycoprotease family JAV55_03095 PF00583 Acetyltransferase (GNAT) family JAV55_03100 PF00814 Glycoprotease family JAV55_03105 PF12848 ABC transporter JAV55_03105 PF00005 ABC transporter JAV55_03105 PF16326 ABC transporter C-terminal domain JAV55_03110 PF01967 MoaC family JAV55_03115 PF06971 Putative DNA-binding protein N-terminus JAV55_03115 PF02629 CoA binding domain JAV55_03120 PF02416 mttA/Hcf106 family JAV55_03125 PF00902 Sec-independent protein translocase protein (TatC) JAV55_03130 PF14146 Domain of unknown function (DUF4305) JAV55_03135 PF02517 CPBP intramembrane metalloprotease JAV55_03140 PF00166 Chaperonin 10 Kd subunit JAV55_03145 PF00118 TCP-1/cpn60 chaperonin family JAV55_03155 PF08863 YolD-like protein JAV55_03160 PF04294 VanW like protein JAV55_03165 PF10787 Uncharacterised protein from bacillus cereus group JAV55_03175 PF02586 SOS response associated peptidase (SRAP) JAV55_03185 PF17933 Tetracyclin repressor-like, C-terminal domain JAV55_03185 PF00440 Bacterial regulatory proteins, tetR family JAV55_03190 PF00391 PEP-utilising enzyme, mobile domain JAV55_03190 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JAV55_03200 PF04343 Protein of unknown function, DUF488 JAV55_03205 PF00106 short chain dehydrogenase JAV55_03210 PF00135 Carboxylesterase family JAV55_03215 PF07690 Major Facilitator Superfamily JAV55_03220 PF04012 PspA/IM30 family JAV55_03225 PF08271 TFIIB zinc-binding JAV55_03230 PF04536 TPM domain JAV55_03235 PF13421 SPFH domain-Band 7 family JAV55_03245 PF11495 Archaeal transcriptional regulator TrmB JAV55_03245 PF01978 Sugar-specific transcriptional regulator TrmB JAV55_03250 PF01810 LysE type translocator JAV55_03255 PF06803 Protein of unknown function (DUF1232) JAV55_03260 PF01098 Cell cycle protein JAV55_03265 PF01098 Cell cycle protein JAV55_03285 PF01522 Polysaccharide deacetylase JAV55_03285 PF13739 Deacetylase PdaC JAV55_03285 PF11738 Protein of unknown function (DUF3298) JAV55_03290 PF00128 Alpha amylase, catalytic domain JAV55_03290 PF09154 Domain of unknown function (DUF1939) JAV55_03295 PF00356 Bacterial regulatory proteins, lacI family JAV55_03300 PF00128 Alpha amylase, catalytic domain JAV55_03300 PF02903 Alpha amylase, N-terminal ig-like domain JAV55_03305 PF13416 Bacterial extracellular solute-binding protein JAV55_03310 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_03315 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_03320 PF06691 Protein of unknown function (DUF1189) JAV55_03325 PF03632 Glycosyl hydrolase family 65 central catalytic domain JAV55_03325 PF03633 Glycosyl hydrolase family 65, C-terminal domain JAV55_03325 PF03636 Glycosyl hydrolase family 65, N-terminal domain JAV55_03330 PF00128 Alpha amylase, catalytic domain JAV55_03330 PF16657 Maltogenic Amylase, C-terminal domain JAV55_03335 PF13419 Haloacid dehalogenase-like hydrolase JAV55_03340 PF00579 tRNA synthetases class I (W and Y) JAV55_03340 PF01479 S4 domain JAV55_03345 PF01047 MarR family JAV55_03360 PF03330 Lytic transglycolase JAV55_03365 PF07676 WD40-like Beta Propeller Repeat JAV55_03370 PF13170 Protein of unknown function (DUF4003) JAV55_03385 PF10502 Signal peptidase, peptidase S26 JAV55_03395 PF13460 NAD(P)H-binding JAV55_03400 PF12833 Helix-turn-helix domain JAV55_03405 PF00394 Multicopper oxidase JAV55_03405 PF07731 Multicopper oxidase JAV55_03405 PF07732 Multicopper oxidase JAV55_03420 PF01545 Cation efflux family JAV55_03420 PF16916 Dimerisation domain of Zinc Transporter JAV55_03425 PF07726 ATPase family associated with various cellular activities (AAA) JAV55_03425 PF17863 AAA lid domain JAV55_03430 PF01882 Protein of unknown function DUF58 JAV55_03435 PF01841 Transglutaminase-like superfamily JAV55_03435 PF13559 Domain of unknown function (DUF4129) JAV55_03435 PF11992 Domain of unknown function (DUF3488) JAV55_03440 PF00958 GMP synthase C terminal domain JAV55_03440 PF00117 Glutamine amidotransferase class-I JAV55_03440 PF02540 NAD synthase JAV55_03445 PF00860 Permease family JAV55_03455 PF13076 Fur-regulated basic protein A JAV55_03460 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JAV55_03465 PF14044 NETI protein JAV55_03470 PF00731 AIR carboxylase JAV55_03475 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JAV55_03475 PF02222 ATP-grasp domain JAV55_03480 PF00206 Lyase JAV55_03480 PF10397 Adenylosuccinate lyase C-terminus JAV55_03485 PF01259 SAICAR synthetase JAV55_03490 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JAV55_03500 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JAV55_03500 PF02769 AIR synthase related protein, C-terminal domain JAV55_03500 PF00586 AIR synthase related protein, N-terminal domain JAV55_03505 PF00156 Phosphoribosyl transferase domain JAV55_03510 PF00586 AIR synthase related protein, N-terminal domain JAV55_03510 PF02769 AIR synthase related protein, C-terminal domain JAV55_03515 PF00551 Formyl transferase JAV55_03520 PF01808 AICARFT/IMPCHase bienzyme JAV55_03520 PF02142 MGS-like domain JAV55_03525 PF02844 Phosphoribosylglycinamide synthetase, N domain JAV55_03525 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JAV55_03525 PF02843 Phosphoribosylglycinamide synthetase, C domain JAV55_03535 PF00067 Cytochrome P450 JAV55_03550 PF11127 Protein of unknown function (DUF2892) JAV55_03555 PF13382 Adenine deaminase C-terminal domain JAV55_03555 PF01979 Amidohydrolase family JAV55_03560 PF11258 Protein of unknown function (DUF3048) N-terminal domain JAV55_03560 PF17479 Protein of unknown function (DUF3048) C-terminal domain JAV55_03565 PF01371 Trp repressor protein JAV55_03570 PF01884 PcrB family JAV55_03575 PF13361 UvrD-like helicase C-terminal domain JAV55_03575 PF00580 UvrD/REP helicase N-terminal domain JAV55_03580 PF00533 BRCA1 C Terminus (BRCT) domain JAV55_03580 PF01653 NAD-dependent DNA ligase adenylation domain JAV55_03580 PF03120 NAD-dependent DNA ligase OB-fold domain JAV55_03580 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JAV55_03580 PF12826 Helix-hairpin-helix motif JAV55_03585 PF07537 CamS sex pheromone cAM373 precursor JAV55_03590 PF14503 YhfZ C-terminal domain JAV55_03590 PF14502 Helix-turn-helix domain JAV55_03600 PF10941 Protein of unknown function DUF2620 JAV55_03605 PF10797 Protein of unknown function JAV55_03610 PF02126 Phosphotriesterase family JAV55_03615 PF00155 Aminotransferase class I and II JAV55_03620 PF01676 Metalloenzyme superfamily JAV55_03625 PF01168 Alanine racemase, N-terminal domain JAV55_03630 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JAV55_03635 PF02308 MgtC family JAV55_03640 PF00474 Sodium:solute symporter family JAV55_03645 PF02686 Glu-tRNAGln amidotransferase C subunit JAV55_03650 PF01425 Amidase JAV55_03655 PF02934 GatB/GatE catalytic domain JAV55_03655 PF02637 GatB domain JAV55_03670 PF02156 Glycosyl hydrolase family 26 JAV55_03675 PF00440 Bacterial regulatory proteins, tetR family JAV55_03680 PF00873 AcrB/AcrD/AcrF family JAV55_03690 PF13302 Acetyltransferase (GNAT) domain JAV55_03695 PF01156 Inosine-uridine preferring nucleoside hydrolase JAV55_03700 PF00781 Diacylglycerol kinase catalytic domain JAV55_03705 PF05958 tRNA (Uracil-5-)-methyltransferase JAV55_03705 PF01938 TRAM domain JAV55_03715 PF00145 C-5 cytosine-specific DNA methylase JAV55_03720 PF03852 DNA mismatch endonuclease Vsr JAV55_03725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JAV55_03725 PF00367 phosphotransferase system, EIIB JAV55_03725 PF02378 Phosphotransferase system, EIIC JAV55_03730 PF00232 Glycosyl hydrolase family 1 JAV55_03735 PF03123 CAT RNA binding domain JAV55_03735 PF00874 PRD domain JAV55_03740 PF18801 response regulator aspartate phosphatase H, N terminal JAV55_03755 PF01709 Transcriptional regulator JAV55_03760 PF01381 Helix-turn-helix JAV55_03770 PF00171 Aldehyde dehydrogenase family JAV55_03775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JAV55_03780 PF00939 Sodium:sulfate symporter transmembrane region JAV55_03785 PF12848 ABC transporter JAV55_03785 PF16326 ABC transporter C-terminal domain JAV55_03785 PF00005 ABC transporter JAV55_03795 PF02649 Type I GTP cyclohydrolase folE2 JAV55_03810 PF02492 CobW/HypB/UreG, nucleotide-binding domain JAV55_03810 PF07683 Cobalamin synthesis protein cobW C-terminal domain JAV55_03815 PF03744 6-carboxyhexanoate--CoA ligase JAV55_03820 PF00202 Aminotransferase class-III JAV55_03825 PF00155 Aminotransferase class I and II JAV55_03835 PF06968 Biotin and Thiamin Synthesis associated domain JAV55_03835 PF04055 Radical SAM superfamily JAV55_03840 PF00067 Cytochrome P450 JAV55_03850 PF13411 MerR HTH family regulatory protein JAV55_03855 PF07690 Major Facilitator Superfamily JAV55_03860 PF12848 ABC transporter JAV55_03860 PF00005 ABC transporter JAV55_03865 PF00270 DEAD/DEAH box helicase JAV55_03865 PF00271 Helicase conserved C-terminal domain JAV55_03870 PF16884 N-terminal domain of oxidoreductase JAV55_03870 PF00107 Zinc-binding dehydrogenase JAV55_03875 PF11486 Protein of unknown function (DUF3212) JAV55_03880 PF11181 Heat induced stress protein YflT JAV55_03885 PF00939 Sodium:sulfate symporter transmembrane region JAV55_03905 PF00753 Metallo-beta-lactamase superfamily JAV55_03915 PF02898 Nitric oxide synthase, oxygenase domain JAV55_03920 PF13630 SdpI/YhfL protein family JAV55_03920 PF07853 Protein of unknown function (DUF1648) JAV55_03925 PF01022 Bacterial regulatory protein, arsR family JAV55_03930 PF00708 Acylphosphatase JAV55_03935 PF03475 3-alpha domain JAV55_03935 PF03473 MOSC domain JAV55_03940 PF11121 Protein of unknown function (DUF2639) JAV55_03950 PF00557 Metallopeptidase family M24 JAV55_03955 PF00884 Sulfatase JAV55_03960 PF09350 Domain of unknown function (DUF1992) JAV55_03965 PF01235 Sodium:alanine symporter family JAV55_03970 PF00367 phosphotransferase system, EIIB JAV55_03970 PF02378 Phosphotransferase system, EIIC JAV55_03975 PF00128 Alpha amylase, catalytic domain JAV55_03975 PF16657 Maltogenic Amylase, C-terminal domain JAV55_03980 PF00392 Bacterial regulatory proteins, gntR family JAV55_03980 PF07702 UTRA domain JAV55_04005 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JAV55_04010 PF00132 Bacterial transferase hexapeptide (six repeats) JAV55_04015 PF16363 GDP-mannose 4,6 dehydratase JAV55_04025 PF00535 Glycosyl transferase family 2 JAV55_04030 PF13181 Tetratricopeptide repeat JAV55_04030 PF00535 Glycosyl transferase family 2 JAV55_04035 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JAV55_04040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JAV55_04040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JAV55_04045 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JAV55_04045 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JAV55_04045 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JAV55_04050 PF07859 alpha/beta hydrolase fold JAV55_04055 PF01638 HxlR-like helix-turn-helix JAV55_04060 PF00881 Nitroreductase family JAV55_04065 PF02872 5'-nucleotidase, C-terminal domain JAV55_04065 PF00149 Calcineurin-like phosphoesterase JAV55_04070 PF01965 DJ-1/PfpI family JAV55_04075 PF06569 Protein of unknown function (DUF1128) JAV55_04080 PF01235 Sodium:alanine symporter family JAV55_04085 PF01451 Low molecular weight phosphotyrosine protein phosphatase JAV55_04095 PF03631 Virulence factor BrkB JAV55_04100 PF07690 Major Facilitator Superfamily JAV55_04110 PF01699 Sodium/calcium exchanger protein JAV55_04115 PF14167 YfkD-like protein JAV55_04120 PF04055 Radical SAM superfamily JAV55_04120 PF08756 YfkB-like domain JAV55_04130 PF01522 Polysaccharide deacetylase JAV55_04135 PF00465 Iron-containing alcohol dehydrogenase JAV55_04145 PF01544 CorA-like Mg2+ transporter protein JAV55_04150 PF00730 HhH-GPD superfamily base excision DNA repair protein JAV55_04155 PF05958 tRNA (Uracil-5-)-methyltransferase JAV55_04155 PF01938 TRAM domain JAV55_04185 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JAV55_04190 PF10925 Protein of unknown function (DUF2680) JAV55_04195 PF07690 Major Facilitator Superfamily JAV55_04200 PF00367 phosphotransferase system, EIIB JAV55_04200 PF02378 Phosphotransferase system, EIIC JAV55_04205 PF00874 PRD domain JAV55_04205 PF03123 CAT RNA binding domain JAV55_04215 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) JAV55_04220 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JAV55_04220 PF00361 Proton-conducting membrane transporter JAV55_04225 PF10057 Uncharacterized conserved protein (DUF2294) JAV55_04235 PF00676 Dehydrogenase E1 component JAV55_04240 PF02780 Transketolase, C-terminal domain JAV55_04240 PF02779 Transketolase, pyrimidine binding domain JAV55_04245 PF00364 Biotin-requiring enzyme JAV55_04245 PF02817 e3 binding domain JAV55_04245 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JAV55_04250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JAV55_04250 PF07992 Pyridine nucleotide-disulphide oxidoreductase JAV55_04255 PF01590 GAF domain JAV55_04255 PF00158 Sigma-54 interaction domain JAV55_04255 PF02954 Bacterial regulatory protein, Fis family JAV55_04260 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JAV55_04265 PF02056 Family 4 glycosyl hydrolase JAV55_04265 PF11975 Family 4 glycosyl hydrolase C-terminal domain JAV55_04270 PF01380 SIS domain JAV55_04270 PF01418 Helix-turn-helix domain, rpiR family JAV55_04275 PF02378 Phosphotransferase system, EIIC JAV55_04275 PF00367 phosphotransferase system, EIIB JAV55_04290 PF01638 HxlR-like helix-turn-helix JAV55_04295 PF07681 DoxX JAV55_04300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JAV55_04305 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JAV55_04305 PF04616 Glycosyl hydrolases family 43 JAV55_04310 PF04616 Glycosyl hydrolases family 43 JAV55_04310 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JAV55_04315 PF02311 AraC-like ligand binding domain JAV55_04315 PF12833 Helix-turn-helix domain JAV55_04320 PF13416 Bacterial extracellular solute-binding protein JAV55_04325 PF02525 Flavodoxin-like fold JAV55_04330 PF00293 NUDIX domain JAV55_04335 PF12867 DinB superfamily JAV55_04340 PF09924 Uncharacterised conserved protein (DUF2156) JAV55_04340 PF03706 Lysylphosphatidylglycerol synthase TM region JAV55_04345 PF02567 Phenazine biosynthesis-like protein JAV55_04350 PF00881 Nitroreductase family JAV55_04355 PF14151 YfhD-like protein JAV55_04370 PF01370 NAD dependent epimerase/dehydratase family JAV55_04370 PF08338 Domain of unknown function (DUF1731) JAV55_04375 PF02631 RecX family JAV55_04380 PF08838 Protein of unknown function (DUF1811) JAV55_04390 PF08176 Small acid-soluble spore protein K family JAV55_04395 PF14043 WVELL protein JAV55_04400 PF00535 Glycosyl transferase family 2 JAV55_04410 PF09586 Bacterial membrane protein YfhO JAV55_04415 PF04307 LexA-binding, inner membrane-associated putative hydrolase JAV55_04420 PF14815 NUDIX domain JAV55_04420 PF00730 HhH-GPD superfamily base excision DNA repair protein JAV55_04440 PF14182 YgaB-like protein JAV55_04445 PF04167 Protein of unknown function (DUF402) JAV55_04450 PF00664 ABC transporter transmembrane region JAV55_04450 PF00005 ABC transporter JAV55_04455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JAV55_04455 PF00005 ABC transporter JAV55_04460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JAV55_04460 PF00005 ABC transporter JAV55_04465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JAV55_04470 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_04475 PF12911 N-terminal TM domain of oligopeptide transport permease C JAV55_04475 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_04480 PF06081 Aromatic acid exporter family member 1 JAV55_04485 PF00202 Aminotransferase class-III JAV55_04490 PF00578 AhpC/TSA family JAV55_04495 PF01475 Ferric uptake regulator family JAV55_04500 PF11023 Zinc-ribbon containing domain JAV55_04505 PF14540 Nucleotidyltransferase-like JAV55_04505 PF18576 Helix-turn-helix domain JAV55_04605 PF18801 response regulator aspartate phosphatase H, N terminal JAV55_04620 PF01510 N-acetylmuramoyl-L-alanine amidase JAV55_04620 PF01471 Putative peptidoglycan binding domain JAV55_04630 PF14449 Pre-toxin TG JAV55_04630 PF04740 LXG domain of WXG superfamily JAV55_04635 PF13181 Tetratricopeptide repeat JAV55_04635 PF18801 response regulator aspartate phosphatase H, N terminal JAV55_04640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JAV55_04640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JAV55_04640 PF02824 TGS domain JAV55_04640 PF03129 Anticodon binding domain JAV55_04650 PF01487 Type I 3-dehydroquinase JAV55_04655 PF13667 ThiC-associated domain JAV55_04655 PF01964 Radical SAM ThiC family JAV55_04660 PF00005 ABC transporter JAV55_04665 PF09084 NMT1/THI5 like JAV55_04670 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_04675 PF00296 Luciferase-like monooxygenase JAV55_04685 PF01381 Helix-turn-helix JAV55_04695 PF13732 Domain of unknown function (DUF4162) JAV55_04695 PF00005 ABC transporter JAV55_04715 PF00253 Ribosomal protein S14p/S29e JAV55_04730 PF08331 Domain of unknown function (DUF1730) JAV55_04735 PF12671 Putative amidase domain JAV55_04740 PF00588 SpoU rRNA Methylase family JAV55_04745 PF13171 Protein of unknown function (DUF4004) JAV55_04750 PF04519 Polymer-forming cytoskeletal JAV55_04760 PF06798 PrkA serine protein kinase C-terminal domain JAV55_04760 PF08298 PrkA AAA domain JAV55_04765 PF04285 Protein of unknown function (DUF444) JAV55_04775 PF07690 Major Facilitator Superfamily JAV55_04780 PF03358 NADPH-dependent FMN reductase JAV55_04790 PF00005 ABC transporter JAV55_04795 PF00005 ABC transporter JAV55_04800 PF12679 ABC-2 family transporter protein JAV55_04805 PF00313 'Cold-shock' DNA-binding domain JAV55_04810 PF00005 ABC transporter JAV55_04810 PF09383 NIL domain JAV55_04815 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_04820 PF03180 NLPA lipoprotein JAV55_04825 PF00375 Sodium:dicarboxylate symporter family JAV55_04835 PF00326 Prolyl oligopeptidase family JAV55_04840 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JAV55_04850 PF07875 Coat F domain JAV55_04855 PF00989 PAS fold JAV55_04855 PF13188 PAS domain JAV55_04855 PF13426 PAS domain JAV55_04855 PF00512 His Kinase A (phospho-acceptor) domain JAV55_04855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_04860 PF00149 Calcineurin-like phosphoesterase JAV55_04860 PF00746 LPXTG cell wall anchor motif JAV55_04860 PF00565 Staphylococcal nuclease homologue JAV55_04860 PF02872 5'-nucleotidase, C-terminal domain JAV55_04865 PF04203 Sortase domain JAV55_04870 PF00849 RNA pseudouridylate synthase JAV55_04870 PF01479 S4 domain JAV55_04875 PF17326 Family of unknown function (DUF5365) JAV55_04880 PF00571 CBS domain JAV55_04885 PF13419 Haloacid dehalogenase-like hydrolase JAV55_04890 PF00583 Acetyltransferase (GNAT) family JAV55_04890 PF00795 Carbon-nitrogen hydrolase JAV55_04895 PF00005 ABC transporter JAV55_04895 PF12848 ABC transporter JAV55_04895 PF16326 ABC transporter C-terminal domain JAV55_04900 PF01226 Formate/nitrite transporter JAV55_04905 PF03547 Membrane transport protein JAV55_04910 PF00107 Zinc-binding dehydrogenase JAV55_04910 PF08240 Alcohol dehydrogenase GroES-like domain JAV55_04915 PF04309 Glycerol-3-phosphate responsive antiterminator JAV55_04920 PF00230 Major intrinsic protein JAV55_04925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JAV55_04925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JAV55_04930 PF01266 FAD dependent oxidoreductase JAV55_04930 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JAV55_04935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JAV55_04935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JAV55_04935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JAV55_04935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JAV55_04950 PF13185 GAF domain JAV55_04950 PF07730 Histidine kinase JAV55_04955 PF00196 Bacterial regulatory proteins, luxR family JAV55_04955 PF00072 Response regulator receiver domain JAV55_04960 PF03358 NADPH-dependent FMN reductase JAV55_04965 PF14148 YhdB-like protein JAV55_04970 PF13028 Protein of unknown function (DUF3889) JAV55_04975 PF02082 Transcriptional regulator JAV55_04980 PF00175 Oxidoreductase NAD-binding domain JAV55_04980 PF00042 Globin JAV55_04980 PF00970 Oxidoreductase FAD-binding domain JAV55_04985 PF04293 SpoVR like protein JAV55_04990 PF01476 LysM domain JAV55_04990 PF00877 NlpC/P60 family JAV55_04995 PF03466 LysR substrate binding domain JAV55_04995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JAV55_05000 PF00285 Citrate synthase, C-terminal domain JAV55_05005 PF07995 Glucose / Sorbosone dehydrogenase JAV55_05015 PF00209 Sodium:neurotransmitter symporter family JAV55_05025 PF12833 Helix-turn-helix domain JAV55_05025 PF06445 GyrI-like small molecule binding domain JAV55_05030 PF00155 Aminotransferase class I and II JAV55_05030 PF00392 Bacterial regulatory proteins, gntR family JAV55_05040 PF17453 Sigma-M inhibitor JAV55_05045 PF13800 Sigma factor regulator N-terminal JAV55_05045 PF13791 Sigma factor regulator C-terminal JAV55_05050 PF08281 Sigma-70, region 4 JAV55_05050 PF04542 Sigma-70 region 2 JAV55_05055 PF07883 Cupin domain JAV55_05060 PF01553 Acyltransferase JAV55_05065 PF05656 Protein of unknown function (DUF805) JAV55_05075 PF00440 Bacterial regulatory proteins, tetR family JAV55_05080 PF01595 Cyclin M transmembrane N-terminal domain JAV55_05080 PF03471 Transporter associated domain JAV55_05080 PF00571 CBS domain JAV55_05085 PF13411 MerR HTH family regulatory protein JAV55_05090 PF00571 CBS domain JAV55_05090 PF03471 Transporter associated domain JAV55_05090 PF01595 Cyclin M transmembrane N-terminal domain JAV55_05105 PF01520 N-acetylmuramoyl-L-alanine amidase JAV55_05105 PF05036 Sporulation related domain JAV55_05110 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JAV55_05115 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JAV55_05120 PF03009 Glycerophosphoryl diester phosphodiesterase family JAV55_05125 PF17444 Uncharacterized YhdX-like JAV55_05130 PF00924 Mechanosensitive ion channel JAV55_05135 PF02146 Sir2 family JAV55_05145 PF01522 Polysaccharide deacetylase JAV55_05150 PF01063 Amino-transferase class IV JAV55_05155 PF03553 Na+/H+ antiporter family JAV55_05160 PF01263 Aldose 1-epimerase JAV55_05165 PF16302 Domain of unknown function (DUF4944) JAV55_05185 PF00582 Universal stress protein family JAV55_05190 PF00005 ABC transporter JAV55_05190 PF00664 ABC transporter transmembrane region JAV55_05195 PF00664 ABC transporter transmembrane region JAV55_05195 PF00005 ABC transporter JAV55_05210 PF00269 Small, acid-soluble spore proteins, alpha/beta type JAV55_05220 PF00005 ABC transporter JAV55_05220 PF17912 MalK OB fold domain JAV55_05220 PF03459 TOBE domain JAV55_05225 PF13556 PucR C-terminal helix-turn-helix domain JAV55_05230 PF17277 Family of unknown function (DUF5342) JAV55_05235 PF14398 YheC/D like ATP-grasp JAV55_05240 PF14398 YheC/D like ATP-grasp JAV55_05245 PF04286 Protein of unknown function (DUF445) JAV55_05250 PF06133 Control of competence regulator ComK, YlbF/YmcA JAV55_05260 PF04055 Radical SAM superfamily JAV55_05265 PF00999 Sodium/hydrogen exchanger family JAV55_05270 PF02080 TrkA-C domain JAV55_05280 PF00378 Enoyl-CoA hydratase/isomerase JAV55_05285 PF18801 response regulator aspartate phosphatase H, N terminal JAV55_05300 PF14120 YhzD-like protein JAV55_05305 PF00005 ABC transporter JAV55_05305 PF13732 Domain of unknown function (DUF4162) JAV55_05315 PF00149 Calcineurin-like phosphoesterase JAV55_05320 PF13514 AAA domain JAV55_05325 PF01966 HD domain JAV55_05330 PF14147 Sporulation protein YhaL JAV55_05340 PF09680 Family of unknown function JAV55_05355 PF11667 Putative zincin peptidase JAV55_05360 PF08963 Protein of unknown function (DUF1878) JAV55_05365 PF01047 MarR family JAV55_05370 PF12732 YtxH-like protein JAV55_05375 PF17099 Tryptophan transporter TrpP JAV55_05380 PF00266 Aminotransferase class-V JAV55_05385 PF01230 HIT domain JAV55_05390 PF00005 ABC transporter JAV55_05395 PF05975 Bacterial ABC transporter protein EcsB JAV55_05400 PF12787 EcsC protein family JAV55_05405 PF01546 Peptidase family M20/M25/M40 JAV55_05405 PF07687 Peptidase dimerisation domain JAV55_05415 PF03992 Antibiotic biosynthesis monooxygenase JAV55_05420 PF00912 Transglycosylase JAV55_05420 PF00905 Penicillin binding protein transpeptidase domain JAV55_05425 PF01208 Uroporphyrinogen decarboxylase (URO-D) JAV55_05430 PF00762 Ferrochelatase JAV55_05435 PF01593 Flavin containing amine oxidoreductase JAV55_05440 PF17932 Tetracyclin repressor-like, C-terminal domain JAV55_05440 PF00440 Bacterial regulatory proteins, tetR family JAV55_05450 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JAV55_05450 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JAV55_05455 PF05343 M42 glutamyl aminopeptidase JAV55_05465 PF00375 Sodium:dicarboxylate symporter family JAV55_05470 PF14149 YhfH-like protein JAV55_05475 PF12706 Beta-lactamase superfamily domain JAV55_05480 PF10437 Bacterial lipoate protein ligase C-terminus JAV55_05480 PF03099 Biotin/lipoate A/B protein ligase family JAV55_05485 PF13193 AMP-binding enzyme C-terminal domain JAV55_05485 PF00501 AMP-binding enzyme JAV55_05495 PF01381 Helix-turn-helix JAV55_05495 PF07883 Cupin domain JAV55_05510 PF01435 Peptidase family M48 JAV55_05510 PF16491 CAAX prenyl protease N-terminal, five membrane helices JAV55_05515 PF00082 Subtilase family JAV55_05515 PF05922 Peptidase inhibitor I9 JAV55_05520 PF00892 EamA-like transporter family JAV55_05525 PF01497 Periplasmic binding protein JAV55_05530 PF01032 FecCD transport family JAV55_05535 PF01032 FecCD transport family JAV55_05540 PF00300 Histidine phosphatase superfamily (branch 1) JAV55_05545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JAV55_05550 PF01266 FAD dependent oxidoreductase JAV55_05550 PF00355 Rieske [2Fe-2S] domain JAV55_05560 PF08858 IDEAL domain JAV55_05565 PF06338 ComK protein JAV55_05575 PF09335 SNARE associated Golgi protein JAV55_05580 PF10502 Signal peptidase, peptidase S26 JAV55_05585 PF00082 Subtilase family JAV55_05595 PF17853 GGDEF-like domain JAV55_05595 PF07905 Purine catabolism regulatory protein-like family JAV55_05595 PF13556 PucR C-terminal helix-turn-helix domain JAV55_05605 PF01979 Amidohydrolase family JAV55_05615 PF07883 Cupin domain JAV55_05615 PF05899 Protein of unknown function (DUF861) JAV55_05620 PF02615 Malate/L-lactate dehydrogenase JAV55_05625 PF02615 Malate/L-lactate dehydrogenase JAV55_05630 PF00549 CoA-ligase JAV55_05630 PF02629 CoA binding domain JAV55_05635 PF06545 Protein of unknown function (DUF1116) JAV55_05645 PF00696 Amino acid kinase family JAV55_05650 PF07690 Major Facilitator Superfamily JAV55_05660 PF18801 response regulator aspartate phosphatase H, N terminal JAV55_05675 PF00356 Bacterial regulatory proteins, lacI family JAV55_05680 PF01547 Bacterial extracellular solute-binding protein JAV55_05685 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_05690 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_05695 PF11975 Family 4 glycosyl hydrolase C-terminal domain JAV55_05695 PF02056 Family 4 glycosyl hydrolase JAV55_05700 PF05145 Transition state regulatory protein AbrB JAV55_05705 PF11007 Spore coat associated protein JA (CotJA) JAV55_05710 PF12652 CotJB protein JAV55_05715 PF05067 Manganese containing catalase JAV55_05720 PF00501 AMP-binding enzyme JAV55_05720 PF13193 AMP-binding enzyme C-terminal domain JAV55_05725 PF07690 Major Facilitator Superfamily JAV55_05735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_05735 PF00989 PAS fold JAV55_05735 PF00512 His Kinase A (phospho-acceptor) domain JAV55_05735 PF16736 Single Cache-like JAV55_05740 PF00486 Transcriptional regulatory protein, C terminal JAV55_05740 PF00072 Response regulator receiver domain JAV55_05745 PF02915 Rubrerythrin JAV55_05755 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_05760 PF12705 PD-(D/E)XK nuclease superfamily JAV55_05765 PF12705 PD-(D/E)XK nuclease superfamily JAV55_05765 PF00580 UvrD/REP helicase N-terminal domain JAV55_05765 PF13361 UvrD-like helicase C-terminal domain JAV55_05770 PF00149 Calcineurin-like phosphoesterase JAV55_05770 PF12320 Type 5 capsule protein repressor C-terminal domain JAV55_05775 PF13476 AAA domain JAV55_05780 PF10676 Spore germination protein gerPA/gerPF JAV55_05785 PF10970 Spore germination protein GerPE JAV55_05795 PF10737 Spore germination protein GerPC JAV55_05800 PF10803 Spore germination GerPB JAV55_05805 PF10676 Spore germination protein gerPA/gerPF JAV55_05810 PF12650 Domain of unknown function (DUF3784) JAV55_05815 PF09388 Spo0E like sporulation regulatory protein JAV55_05830 PF01557 Fumarylacetoacetate (FAA) hydrolase family JAV55_05835 PF03193 RsgA GTPase JAV55_05840 PF07457 Protein of unknown function (DUF1516) JAV55_05845 PF10949 Protein of unknown function (DUF2777) JAV55_05850 PF00733 Asparagine synthase JAV55_05850 PF13537 Glutamine amidotransferase domain JAV55_05855 PF00909 Ammonium Transporter Family JAV55_05865 PF01554 MatE JAV55_05870 PF02311 AraC-like ligand binding domain JAV55_05870 PF12833 Helix-turn-helix domain JAV55_05885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JAV55_05885 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JAV55_05900 PF03323 Bacillus/Clostridium GerA spore germination protein JAV55_05905 PF01810 LysE type translocator JAV55_05910 PF00155 Aminotransferase class I and II JAV55_05910 PF00392 Bacterial regulatory proteins, gntR family JAV55_05915 PF00202 Aminotransferase class-III JAV55_05920 PF00282 Pyridoxal-dependent decarboxylase conserved domain JAV55_05925 PF06276 Ferric iron reductase FhuF-like transporter JAV55_05925 PF04183 IucA / IucC family JAV55_05935 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JAV55_05940 PF06276 Ferric iron reductase FhuF-like transporter JAV55_05940 PF04183 IucA / IucC family JAV55_05945 PF13673 Acetyltransferase (GNAT) domain JAV55_05955 PF13280 WYL domain JAV55_05955 PF08279 HTH domain JAV55_05960 PF02574 Homocysteine S-methyltransferase JAV55_05960 PF02310 B12 binding domain JAV55_05960 PF02607 B12 binding domain JAV55_05960 PF02965 Vitamin B12 dependent methionine synthase, activation domain JAV55_05960 PF00809 Pterin binding enzyme JAV55_05965 PF02219 Methylenetetrahydrofolate reductase JAV55_05965 PF02574 Homocysteine S-methyltransferase JAV55_05970 PF04461 Protein of unknown function (DUF520) JAV55_05975 PF17783 CvfB-like winged helix domain JAV55_05975 PF13509 S1 domain JAV55_05990 PF02645 Uncharacterised protein, DegV family COG1307 JAV55_05995 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JAV55_05995 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JAV55_06000 PF12690 Intracellular proteinase inhibitor JAV55_06005 PF00478 IMP dehydrogenase / GMP reductase domain JAV55_06010 PF12758 Protein of unknown function (DUF3813) JAV55_06025 PF00326 Prolyl oligopeptidase family JAV55_06030 PF01883 Iron-sulfur cluster assembly protein JAV55_06035 PF01118 Semialdehyde dehydrogenase, NAD binding domain JAV55_06035 PF02774 Semialdehyde dehydrogenase, dimerisation domain JAV55_06040 PF01960 ArgJ family JAV55_06045 PF00696 Amino acid kinase family JAV55_06050 PF00202 Aminotransferase class-III JAV55_06055 PF00117 Glutamine amidotransferase class-I JAV55_06055 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JAV55_06060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JAV55_06060 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JAV55_06065 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JAV55_06065 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JAV55_06070 PF02673 Bacitracin resistance protein BacA JAV55_06075 PF14168 YjzC-like protein JAV55_06095 PF02608 ABC transporter substrate-binding protein PnrA-like JAV55_06100 PF10815 ComZ JAV55_06110 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JAV55_06110 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JAV55_06115 PF02801 Beta-ketoacyl synthase, C-terminal domain JAV55_06115 PF00109 Beta-ketoacyl synthase, N-terminal domain JAV55_06120 PF10026 Predicted Zn-dependent protease (DUF2268) JAV55_06125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JAV55_06125 PF00005 ABC transporter JAV55_06130 PF00005 ABC transporter JAV55_06130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JAV55_06135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JAV55_06140 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_06145 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_06145 PF12911 N-terminal TM domain of oligopeptide transport permease C JAV55_06155 PF02441 Flavoprotein JAV55_06165 PF12227 Protein of unknown function (DUF3603) JAV55_06170 PF00579 tRNA synthetases class I (W and Y) JAV55_06175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JAV55_06180 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_06185 PF12911 N-terminal TM domain of oligopeptide transport permease C JAV55_06185 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_06190 PF00005 ABC transporter JAV55_06190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JAV55_06195 PF00005 ABC transporter JAV55_06195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JAV55_06200 PF13508 Acetyltransferase (GNAT) domain JAV55_06205 PF03960 ArsC family JAV55_06210 PF03741 Integral membrane protein TerC family JAV55_06220 PF05389 Negative regulator of genetic competence (MecA) JAV55_06235 PF01970 Tripartite tricarboxylate transporter TctA family JAV55_06240 PF00072 Response regulator receiver domain JAV55_06240 PF12431 Transcriptional regulator JAV55_06245 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JAV55_06245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_06245 PF00989 PAS fold JAV55_06245 PF17203 Single cache domain 3 JAV55_06250 PF06054 Competence protein CoiA-like family JAV55_06255 PF01432 Peptidase family M3 JAV55_06255 PF08439 Oligopeptidase F JAV55_06265 PF01152 Bacterial-like globin JAV55_06270 PF01464 Transglycosylase SLT domain JAV55_06275 PF01928 CYTH domain JAV55_06285 PF04607 Region found in RelA / SpoT proteins JAV55_06290 PF01513 ATP-NAD kinase JAV55_06295 PF00849 RNA pseudouridylate synthase JAV55_06300 PF00149 Calcineurin-like phosphoesterase JAV55_06305 PF02254 TrkA-N domain JAV55_06305 PF02080 TrkA-C domain JAV55_06305 PF00999 Sodium/hydrogen exchanger family JAV55_06310 PF03070 TENA/THI-4/PQQC family JAV55_06315 PF02581 Thiamine monophosphate synthase JAV55_06320 PF01266 FAD dependent oxidoreductase JAV55_06325 PF02597 ThiS family JAV55_06330 PF05690 Thiazole biosynthesis protein ThiG JAV55_06335 PF00899 ThiF family JAV55_06340 PF08543 Phosphomethylpyrimidine kinase JAV55_06350 PF14153 Spore coat protein CotO JAV55_06355 PF10612 Spore coat protein Z JAV55_06360 PF10612 Spore coat protein Z JAV55_06365 PF07552 Spore Coat Protein X and V domain JAV55_06375 PF07552 Spore Coat Protein X and V domain JAV55_06380 PF07098 Protein of unknown function (DUF1360) JAV55_06395 PF14069 Stage VI sporulation protein F JAV55_06400 PF13361 UvrD-like helicase C-terminal domain JAV55_06400 PF00580 UvrD/REP helicase N-terminal domain JAV55_06410 PF09335 SNARE associated Golgi protein JAV55_06415 PF16363 GDP-mannose 4,6 dehydratase JAV55_06420 PF00483 Nucleotidyl transferase JAV55_06425 PF04138 GtrA-like protein JAV55_06430 PF13673 Acetyltransferase (GNAT) domain JAV55_06440 PF00756 Putative esterase JAV55_06455 PF01053 Cys/Met metabolism PLP-dependent enzyme JAV55_06460 PF01053 Cys/Met metabolism PLP-dependent enzyme JAV55_06465 PF05684 Protein of unknown function (DUF819) JAV55_06485 PF04616 Glycosyl hydrolases family 43 JAV55_06490 PF00589 Phage integrase family JAV55_06490 PF14659 Phage integrase, N-terminal SAM-like domain JAV55_06510 PF01381 Helix-turn-helix JAV55_06540 PF09466 Hypothetical protein Yqai JAV55_06550 PF09588 YqaJ-like viral recombinase domain JAV55_06555 PF03837 RecT family JAV55_06570 PF00772 DnaB-like helicase N terminal domain JAV55_06570 PF03796 DnaB-like helicase C terminal domain JAV55_06585 PF05866 Endodeoxyribonuclease RusA JAV55_06600 PF17356 Phage-like element PBSX protein XtrA JAV55_06630 PF18801 response regulator aspartate phosphatase H, N terminal JAV55_06660 PF00145 C-5 cytosine-specific DNA methylase JAV55_06685 PF04860 Phage portal protein JAV55_06690 PF04233 Phage Mu protein F like protein JAV55_06700 PF14550 Putative phage serine protease XkdF JAV55_06705 PF05065 Phage capsid family JAV55_06710 PF14553 YqbF, hypothetical protein domain JAV55_06715 PF11436 Protein of unknown function (DUF3199) JAV55_06720 PF12206 Domain of unknown function (DUF3599) JAV55_06725 PF04883 Bacteriophage HK97-gp10, putative tail-component JAV55_06740 PF04984 Phage tail sheath protein subtilisin-like domain JAV55_06740 PF17481 Phage tail sheath protein beta-sandwich domain JAV55_06740 PF17482 Phage tail sheath C-terminal domain JAV55_06745 PF09393 Phage tail tube protein JAV55_06750 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC JAV55_06760 PF01464 Transglycosylase SLT domain JAV55_06760 PF01464 Transglycosylase SLT domain JAV55_06765 PF01476 LysM domain JAV55_06775 PF10844 Protein of unknown function (DUF2577) JAV55_06780 PF10934 Protein of unknown function (DUF2634) JAV55_06785 PF04865 Baseplate J-like protein JAV55_06790 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) JAV55_06805 PF09636 XkdW protein JAV55_06810 PF09693 Phage uncharacterised protein (Phage_XkdX) JAV55_06820 PF10779 Haemolysin XhlA JAV55_06825 PF04688 SPP1 phage holin JAV55_06830 PF01183 Glycosyl hydrolases family 25 JAV55_06830 PF08239 Bacterial SH3 domain JAV55_06840 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JAV55_06850 PF08863 YolD-like protein JAV55_06865 PF14602 Hexapeptide repeat of succinyl-transferase JAV55_06865 PF12464 Maltose acetyltransferase JAV55_06875 PF03466 LysR substrate binding domain JAV55_06875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JAV55_06880 PF00175 Oxidoreductase NAD-binding domain JAV55_06880 PF00667 FAD binding domain JAV55_06880 PF00258 Flavodoxin JAV55_06885 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JAV55_06885 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JAV55_06890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JAV55_06890 PF03466 LysR substrate binding domain JAV55_06895 PF00892 EamA-like transporter family JAV55_06900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JAV55_06905 PF16800 IseA DL-endopeptidase inhibitor JAV55_06910 PF06725 3D domain JAV55_06910 PF01476 LysM domain JAV55_06915 PF07690 Major Facilitator Superfamily JAV55_06920 PF00440 Bacterial regulatory proteins, tetR family JAV55_06935 PF04634 Protein of unknown function, DUF600 JAV55_06940 PF04740 LXG domain of WXG superfamily JAV55_06945 PF05908 Poly-gamma-glutamate hydrolase JAV55_06950 PF06114 IrrE N-terminal-like domain JAV55_06955 PF01381 Helix-turn-helix JAV55_06975 PF01695 IstB-like ATP binding protein JAV55_06990 PF17356 Phage-like element PBSX protein XtrA JAV55_06995 PF08281 Sigma-70, region 4 JAV55_07000 PF03592 Terminase small subunit JAV55_07000 PF10668 Phage terminase small subunit JAV55_07005 PF17288 Terminase RNAseH like domain JAV55_07005 PF04466 Phage terminase large subunit JAV55_07010 PF04860 Phage portal protein JAV55_07015 PF14550 Putative phage serine protease XkdF JAV55_07020 PF05065 Phage capsid family JAV55_07025 PF11436 Protein of unknown function (DUF3199) JAV55_07030 PF12206 Domain of unknown function (DUF3599) JAV55_07035 PF04883 Bacteriophage HK97-gp10, putative tail-component JAV55_07050 PF04984 Phage tail sheath protein subtilisin-like domain JAV55_07050 PF17481 Phage tail sheath protein beta-sandwich domain JAV55_07050 PF17482 Phage tail sheath C-terminal domain JAV55_07055 PF09393 Phage tail tube protein JAV55_07060 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC JAV55_07075 PF01476 LysM domain JAV55_07085 PF10844 Protein of unknown function (DUF2577) JAV55_07090 PF10934 Protein of unknown function (DUF2634) JAV55_07095 PF04865 Baseplate J-like protein JAV55_07100 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) JAV55_07120 PF10779 Haemolysin XhlA JAV55_07125 PF04688 SPP1 phage holin JAV55_07130 PF01510 N-acetylmuramoyl-L-alanine amidase JAV55_07130 PF01471 Putative peptidoglycan binding domain JAV55_07135 PF00392 Bacterial regulatory proteins, gntR family JAV55_07135 PF07729 FCD domain JAV55_07140 PF00107 Zinc-binding dehydrogenase JAV55_07140 PF08240 Alcohol dehydrogenase GroES-like domain JAV55_07145 PF03786 D-mannonate dehydratase (UxuA) JAV55_07150 PF00106 short chain dehydrogenase JAV55_07155 PF00107 Zinc-binding dehydrogenase JAV55_07155 PF08240 Alcohol dehydrogenase GroES-like domain JAV55_07160 PF07690 Major Facilitator Superfamily JAV55_07165 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system JAV55_07170 PF14171 Toxin SpoIISA, type II toxin-antitoxin system JAV55_07175 PF01384 Phosphate transporter family JAV55_07180 PF01865 Protein of unknown function DUF47 JAV55_07190 PF04854 Protein of unknown function, DUF624 JAV55_07195 PF06580 Histidine kinase JAV55_07195 PF02743 Cache domain JAV55_07195 PF00672 HAMP domain JAV55_07195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_07200 PF12833 Helix-turn-helix domain JAV55_07200 PF00072 Response regulator receiver domain JAV55_07205 PF13416 Bacterial extracellular solute-binding protein JAV55_07210 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_07215 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_07220 PF07470 Glycosyl Hydrolase Family 88 JAV55_07225 PF12833 Helix-turn-helix domain JAV55_07230 PF13472 GDSL-like Lipase/Acylhydrolase family JAV55_07235 PF09224 Domain of unknown function (DUF1961) JAV55_07240 PF04854 Protein of unknown function, DUF624 JAV55_07245 PF18370 Rhamnogalacturonan I lyases beta-sheet domain JAV55_07255 PF13472 GDSL-like Lipase/Acylhydrolase family JAV55_07260 PF18370 Rhamnogalacturonan I lyases beta-sheet domain JAV55_07260 PF01839 FG-GAP repeat JAV55_07265 PF00248 Aldo/keto reductase family JAV55_07270 PF00657 GDSL-like Lipase/Acylhydrolase JAV55_07275 PF08532 Beta-galactosidase trimerisation domain JAV55_07275 PF08533 Beta-galactosidase C-terminal domain JAV55_07275 PF02449 Beta-galactosidase JAV55_07285 PF01547 Bacterial extracellular solute-binding protein JAV55_07290 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_07295 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_07300 PF13520 Amino acid permease JAV55_07305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JAV55_07315 PF13180 PDZ domain JAV55_07320 PF03807 NADP oxidoreductase coenzyme F420-dependent JAV55_07320 PF14748 Pyrroline-5-carboxylate reductase dimerisation JAV55_07325 PF04951 D-aminopeptidase JAV55_07330 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_07335 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_07335 PF12911 N-terminal TM domain of oligopeptide transport permease C JAV55_07340 PF00005 ABC transporter JAV55_07340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JAV55_07345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JAV55_07350 PF17676 LD-carboxypeptidase C-terminal domain JAV55_07350 PF02016 LD-carboxypeptidase N-terminal domain JAV55_07355 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JAV55_07355 PF13378 Enolase C-terminal domain-like JAV55_07360 PF00877 NlpC/P60 family JAV55_07365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JAV55_07365 PF00005 ABC transporter JAV55_07375 PF03061 Thioesterase superfamily JAV55_07405 PF12867 DinB superfamily JAV55_07410 PF00893 Small Multidrug Resistance protein JAV55_07415 PF00893 Small Multidrug Resistance protein JAV55_07420 PF00551 Formyl transferase JAV55_07420 PF01842 ACT domain JAV55_07425 PF01472 PUA domain JAV55_07425 PF00696 Amino acid kinase family JAV55_07430 PF00171 Aldehyde dehydrogenase family JAV55_07435 PF02566 OsmC-like protein JAV55_07440 PF01047 MarR family JAV55_07445 PF02566 OsmC-like protein JAV55_07455 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JAV55_07460 PF00300 Histidine phosphatase superfamily (branch 1) JAV55_07475 PF08267 Cobalamin-independent synthase, N-terminal domain JAV55_07475 PF01717 Cobalamin-independent synthase, Catalytic domain JAV55_07480 PF00082 Subtilase family JAV55_07485 PF11132 Transcriptional regulator protein (SplA) JAV55_07490 PF01769 Divalent cation transporter JAV55_07490 PF03448 MgtE intracellular N domain JAV55_07490 PF00571 CBS domain JAV55_07500 PF13411 MerR HTH family regulatory protein JAV55_07515 PF01047 MarR family JAV55_07520 PF01068 ATP dependent DNA ligase domain JAV55_07525 PF02735 Ku70/Ku80 beta-barrel domain JAV55_07530 PF03707 Bacterial signalling protein N terminal repeat JAV55_07530 PF00990 Diguanylate cyclase, GGDEF domain JAV55_07530 PF00563 EAL domain JAV55_07535 PF09335 SNARE associated Golgi protein JAV55_07540 PF03741 Integral membrane protein TerC family JAV55_07545 PF04542 Sigma-70 region 2 JAV55_07550 PF12791 Anti-sigma factor N-terminus JAV55_07555 PF00269 Small, acid-soluble spore proteins, alpha/beta type JAV55_07560 PF08876 Domain of unknown function (DUF1836) JAV55_07565 PF01435 Peptidase family M48 JAV55_07570 PF02386 Cation transport protein JAV55_07575 PF05223 NTF2-like N-terminal transpeptidase domain JAV55_07575 PF03717 Penicillin-binding Protein dimerisation domain JAV55_07575 PF00905 Penicillin binding protein transpeptidase domain JAV55_07590 PF01757 Acyltransferase family JAV55_07595 PF13426 PAS domain JAV55_07595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_07595 PF00989 PAS fold JAV55_07595 PF13188 PAS domain JAV55_07595 PF00512 His Kinase A (phospho-acceptor) domain JAV55_07600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JAV55_07600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JAV55_07605 PF01008 Initiation factor 2 subunit family JAV55_07610 PF01636 Phosphotransferase enzyme family JAV55_07615 PF00795 Carbon-nitrogen hydrolase JAV55_07620 PF00155 Aminotransferase class I and II JAV55_07625 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain JAV55_07625 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain JAV55_07630 PF00596 Class II Aldolase and Adducin N-terminal domain JAV55_07635 PF03079 ARD/ARD' family JAV55_07640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JAV55_07645 PF06803 Protein of unknown function (DUF1232) JAV55_07655 PF00512 His Kinase A (phospho-acceptor) domain JAV55_07655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_07655 PF02743 Cache domain JAV55_07660 PF01047 MarR family JAV55_07665 PF00691 OmpA family JAV55_07665 PF13677 Membrane MotB of proton-channel complex MotA/MotB JAV55_07670 PF01618 MotA/TolQ/ExbB proton channel family JAV55_07675 PF00004 ATPase family associated with various cellular activities (AAA) JAV55_07675 PF07724 AAA domain (Cdc48 subfamily) JAV55_07675 PF17871 AAA lid domain JAV55_07675 PF10431 C-terminal, D2-small domain, of ClpB protein JAV55_07685 PF06508 Queuosine biosynthesis protein QueC JAV55_07690 PF01242 6-pyruvoyl tetrahydropterin synthase JAV55_07695 PF04055 Radical SAM superfamily JAV55_07700 PF14489 QueF-like protein JAV55_07710 PF05675 Protein of unknown function (DUF817) JAV55_07715 PF13443 Cro/C1-type HTH DNA-binding domain JAV55_07720 PF11188 Protein of unknown function (DUF2975) JAV55_07750 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) JAV55_07760 PF07486 Cell Wall Hydrolase JAV55_07765 PF01943 Polysaccharide biosynthesis protein JAV55_07770 PF00578 AhpC/TSA family JAV55_07780 PF01321 Creatinase/Prolidase N-terminal domain JAV55_07780 PF00557 Metallopeptidase family M24 JAV55_07790 PF00356 Bacterial regulatory proteins, lacI family JAV55_07790 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JAV55_07795 PF00874 PRD domain JAV55_07795 PF03123 CAT RNA binding domain JAV55_07800 PF00367 phosphotransferase system, EIIB JAV55_07800 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JAV55_07800 PF02378 Phosphotransferase system, EIIC JAV55_07805 PF00381 PTS HPr component phosphorylation site JAV55_07810 PF05524 PEP-utilising enzyme, N-terminal JAV55_07810 PF00391 PEP-utilising enzyme, mobile domain JAV55_07810 PF02896 PEP-utilising enzyme, TIM barrel domain JAV55_07815 PF11132 Transcriptional regulator protein (SplA) JAV55_07825 PF00583 Acetyltransferase (GNAT) family JAV55_07830 PF00672 HAMP domain JAV55_07830 PF02743 Cache domain JAV55_07830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JAV55_07840 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JAV55_07840 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JAV55_07845 PF00188 Cysteine-rich secretory protein family JAV55_07850 PF00905 Penicillin binding protein transpeptidase domain JAV55_07850 PF03717 Penicillin-binding Protein dimerisation domain JAV55_07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_07855 PF00989 PAS fold JAV55_07855 PF08447 PAS fold JAV55_07855 PF00512 His Kinase A (phospho-acceptor) domain JAV55_07860 PF00155 Aminotransferase class I and II JAV55_07870 PF06271 RDD family JAV55_07880 PF01584 CheW-like domain JAV55_07880 PF00072 Response regulator receiver domain JAV55_07885 PF14177 YkyB-like protein JAV55_07890 PF07690 Major Facilitator Superfamily JAV55_07895 PF03734 L,D-transpeptidase catalytic domain JAV55_07895 PF01476 LysM domain JAV55_07900 PF10518 TAT (twin-arginine translocation) pathway signal sequence JAV55_07900 PF00149 Calcineurin-like phosphoesterase JAV55_07910 PF10388 EAL-domain associated signalling protein domain JAV55_07910 PF00563 EAL domain JAV55_07920 PF08796 Protein of unknown function (DUF1797) JAV55_07930 PF04308 Ribonuclease H-like JAV55_07935 PF14156 Antirepressor AbbA JAV55_07945 PF03466 LysR substrate binding domain JAV55_07945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JAV55_07950 PF00258 Flavodoxin JAV55_07960 PF00258 Flavodoxin JAV55_07965 PF00132 Bacterial transferase hexapeptide (six repeats) JAV55_07965 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JAV55_07965 PF14602 Hexapeptide repeat of succinyl-transferase JAV55_07970 PF01546 Peptidase family M20/M25/M40 JAV55_07970 PF07687 Peptidase dimerisation domain JAV55_07975 PF03698 Uncharacterised protein family (UPF0180) JAV55_07980 PF10417 C-terminal domain of 1-Cys peroxiredoxin JAV55_07980 PF00578 AhpC/TSA family JAV55_07985 PF00578 AhpC/TSA family JAV55_08000 PF12804 MobA-like NTP transferase domain JAV55_08005 PF00899 ThiF family JAV55_08010 PF03453 MoeA N-terminal region (domain I and II) JAV55_08010 PF03454 MoeA C-terminal region (domain IV) JAV55_08010 PF00994 Probable molybdopterin binding domain JAV55_08015 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JAV55_08020 PF02391 MoaE protein JAV55_08025 PF02597 ThiS family JAV55_08035 PF00005 ABC transporter JAV55_08035 PF00664 ABC transporter transmembrane region JAV55_08040 PF00664 ABC transporter transmembrane region JAV55_08040 PF00005 ABC transporter JAV55_08045 PF04893 Yip1 domain JAV55_08050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JAV55_08055 PF00005 ABC transporter JAV55_08060 PF12704 MacB-like periplasmic core domain JAV55_08060 PF02687 FtsX-like permease family JAV55_08065 PF00455 DeoR C terminal sensor domain JAV55_08065 PF08220 DeoR-like helix-turn-helix domain JAV55_08070 PF00294 pfkB family carbohydrate kinase JAV55_08075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JAV55_08075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JAV55_08080 PF10502 Signal peptidase, peptidase S26 JAV55_08095 PF00005 ABC transporter JAV55_08095 PF12848 ABC transporter JAV55_08105 PF02073 Thermophilic metalloprotease (M29) JAV55_08110 PF17447 Uncharacterized YkpC-like JAV55_08120 PF18277 AbrB C-terminal domain JAV55_08120 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JAV55_08125 PF00989 PAS fold JAV55_08125 PF00512 His Kinase A (phospho-acceptor) domain JAV55_08125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_08130 PF02254 TrkA-N domain JAV55_08130 PF02080 TrkA-C domain JAV55_08135 PF13382 Adenine deaminase C-terminal domain JAV55_08135 PF01979 Amidohydrolase family JAV55_08140 PF00753 Metallo-beta-lactamase superfamily JAV55_08140 PF17770 Ribonuclease J C-terminal domain JAV55_08140 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JAV55_08145 PF07288 Protein of unknown function (DUF1447) JAV55_08160 PF01327 Polypeptide deformylase JAV55_08170 PF10368 Putative cell-wall binding lipoprotein JAV55_08175 PF00676 Dehydrogenase E1 component JAV55_08180 PF02779 Transketolase, pyrimidine binding domain JAV55_08180 PF02780 Transketolase, C-terminal domain JAV55_08185 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JAV55_08185 PF02817 e3 binding domain JAV55_08185 PF00364 Biotin-requiring enzyme JAV55_08190 PF07992 Pyridine nucleotide-disulphide oxidoreductase JAV55_08190 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JAV55_08200 PF13790 SR1 protein JAV55_08205 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JAV55_08205 PF01276 Orn/Lys/Arg decarboxylase, major domain JAV55_08210 PF05256 Uncharacterised protein family (UPF0223) JAV55_08215 PF06335 Protein of unknown function (DUF1054) JAV55_08225 PF00459 Inositol monophosphatase family JAV55_08230 PF00583 Acetyltransferase (GNAT) family JAV55_08245 PF04542 Sigma-70 region 2 JAV55_08245 PF08281 Sigma-70, region 4 JAV55_08250 PF13490 Putative zinc-finger JAV55_08260 PF00679 Elongation factor G C-terminus JAV55_08260 PF14492 Elongation Factor G, domain II JAV55_08260 PF00009 Elongation factor Tu GTP binding domain JAV55_08260 PF03144 Elongation factor Tu domain 2 JAV55_08265 PF14036 YlaH-like protein JAV55_08270 PF01047 MarR family JAV55_08275 PF01494 FAD binding domain JAV55_08280 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) JAV55_08285 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JAV55_08290 PF02562 PhoH-like protein JAV55_08290 PF13638 PIN domain JAV55_08300 PF04960 Glutaminase JAV55_08305 PF07408 Protein of unknown function (DUF1507) JAV55_08310 PF01098 Cell cycle protein JAV55_08315 PF02785 Biotin carboxylase C-terminal domain JAV55_08315 PF00682 HMGL-like JAV55_08315 PF00364 Biotin-requiring enzyme JAV55_08315 PF02436 Conserved carboxylase domain JAV55_08315 PF00289 Biotin carboxylase, N-terminal domain JAV55_08315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JAV55_08320 PF02628 Cytochrome oxidase assembly protein JAV55_08325 PF01040 UbiA prenyltransferase family JAV55_08330 PF00034 Cytochrome c JAV55_08330 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JAV55_08330 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JAV55_08335 PF00115 Cytochrome C and Quinol oxidase polypeptide I JAV55_08340 PF00510 Cytochrome c oxidase subunit III JAV55_08345 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JAV55_08350 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) JAV55_08355 PF08868 YugN-like family JAV55_08360 PF00571 CBS domain JAV55_08365 PF00188 Cysteine-rich secretory protein family JAV55_08365 PF14504 CAP-associated N-terminal JAV55_08370 PF14071 Putative coat protein JAV55_08375 PF14003 YlbE-like protein JAV55_08380 PF06133 Control of competence regulator ComK, YlbF/YmcA JAV55_08385 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JAV55_08395 PF01467 Cytidylyltransferase-like JAV55_08400 PF07670 Nucleoside recognition JAV55_08405 PF13180 PDZ domain JAV55_08405 PF05362 Lon protease (S16) C-terminal proteolytic domain JAV55_08410 PF05636 HIGH Nucleotidyl Transferase JAV55_08415 PF02620 Large ribosomal RNA subunit accumulation protein YceD JAV55_08420 PF01783 Ribosomal L32p protein family JAV55_08430 PF00583 Acetyltransferase (GNAT) family JAV55_08435 PF02558 Ketopantoate reductase PanE/ApbA JAV55_08435 PF08546 Ketopantoate reductase PanE/ApbA C terminal JAV55_08440 PF10079 Bacillithiol biosynthesis BshC JAV55_08445 PF02381 MraZ protein, putative antitoxin-like JAV55_08450 PF01795 MraW methylase family JAV55_08460 PF03793 PASTA domain JAV55_08460 PF03717 Penicillin-binding Protein dimerisation domain JAV55_08460 PF00905 Penicillin binding protein transpeptidase domain JAV55_08465 PF00905 Penicillin binding protein transpeptidase domain JAV55_08465 PF03717 Penicillin-binding Protein dimerisation domain JAV55_08465 PF03793 PASTA domain JAV55_08470 PF01225 Mur ligase family, catalytic domain JAV55_08470 PF08245 Mur ligase middle domain JAV55_08470 PF02875 Mur ligase family, glutamate ligase domain JAV55_08475 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JAV55_08475 PF00953 Glycosyl transferase family 4 JAV55_08480 PF08245 Mur ligase middle domain JAV55_08480 PF02875 Mur ligase family, glutamate ligase domain JAV55_08485 PF01098 Cell cycle protein JAV55_08490 PF03033 Glycosyltransferase family 28 N-terminal domain JAV55_08490 PF04101 Glycosyltransferase family 28 C-terminal domain JAV55_08495 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JAV55_08495 PF01565 FAD binding domain JAV55_08500 PF08478 POTRA domain, FtsQ-type JAV55_08505 PF05949 Bacterial protein of unknown function (DUF881) JAV55_08510 PF05949 Bacterial protein of unknown function (DUF881) JAV55_08515 PF06947 Protein of unknown function (DUF1290) JAV55_08520 PF02491 SHS2 domain inserted in FTSA JAV55_08525 PF00091 Tubulin/FtsZ family, GTPase domain JAV55_08525 PF12327 FtsZ family, C-terminal domain JAV55_08530 PF05922 Peptidase inhibitor I9 JAV55_08530 PF00082 Subtilase family JAV55_08535 PF00082 Subtilase family JAV55_08535 PF05922 Peptidase inhibitor I9 JAV55_08540 PF03419 Sporulation factor SpoIIGA JAV55_08545 PF04545 Sigma-70, region 4 JAV55_08545 PF04542 Sigma-70 region 2 JAV55_08550 PF04542 Sigma-70 region 2 JAV55_08550 PF04539 Sigma-70 region 3 JAV55_08550 PF04545 Sigma-70, region 4 JAV55_08555 PF00005 ABC transporter JAV55_08560 PF08241 Methyltransferase domain JAV55_08565 PF05239 PRC-barrel domain JAV55_08570 PF02578 Multi-copper polyphenol oxidoreductase laccase JAV55_08575 PF01168 Alanine racemase, N-terminal domain JAV55_08580 PF04472 Cell division protein SepF JAV55_08585 PF02325 YGGT family JAV55_08590 PF17774 Putative RNA-binding domain in YlmH JAV55_08590 PF01479 S4 domain JAV55_08595 PF05103 DivIVA protein JAV55_08600 PF06827 Zinc finger found in FPG and IleRS JAV55_08600 PF00133 tRNA synthetases class I (I, L, M and V) JAV55_08600 PF08264 Anticodon-binding domain of tRNA JAV55_08605 PF01258 Prokaryotic dksA/traR C4-type zinc finger JAV55_08610 PF01252 Signal peptidase (SPase) II JAV55_08615 PF01479 S4 domain JAV55_08615 PF00849 RNA pseudouridylate synthase JAV55_08620 PF00156 Phosphoribosyl transferase domain JAV55_08625 PF00860 Permease family JAV55_08630 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JAV55_08630 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JAV55_08635 PF01979 Amidohydrolase family JAV55_08640 PF00117 Glutamine amidotransferase class-I JAV55_08640 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JAV55_08645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JAV55_08645 PF02142 MGS-like domain JAV55_08645 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JAV55_08650 PF00175 Oxidoreductase NAD-binding domain JAV55_08650 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JAV55_08655 PF01180 Dihydroorotate dehydrogenase JAV55_08660 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JAV55_08665 PF00156 Phosphoribosyl transferase domain JAV55_08675 PF01507 Phosphoadenosine phosphosulfate reductase family JAV55_08680 PF01384 Phosphate transporter family JAV55_08685 PF01747 ATP-sulfurylase JAV55_08685 PF14306 PUA-like domain JAV55_08695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JAV55_08700 PF01903 CbiX JAV55_08710 PF05670 NFACT protein RNA binding domain JAV55_08715 PF00690 Cation transporter/ATPase, N-terminus JAV55_08715 PF00689 Cation transporting ATPase, C-terminus JAV55_08720 PF03755 YicC-like family, N-terminal region JAV55_08720 PF08340 Domain of unknown function (DUF1732) JAV55_08725 PF04025 Domain of unknown function (DUF370) JAV55_08730 PF00625 Guanylate kinase JAV55_08735 PF01192 RNA polymerase Rpb6 JAV55_08740 PF02441 Flavoprotein JAV55_08740 PF04127 DNA / pantothenate metabolism flavoprotein JAV55_08745 PF04851 Type III restriction enzyme, res subunit JAV55_08745 PF18074 Primosomal protein N C-terminal domain JAV55_08745 PF00271 Helicase conserved C-terminal domain JAV55_08745 PF17764 3′ DNA-binding domain (3′BD) JAV55_08745 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JAV55_08750 PF01327 Polypeptide deformylase JAV55_08755 PF02911 Formyl transferase, C-terminal domain JAV55_08755 PF00551 Formyl transferase JAV55_08760 PF01189 16S rRNA methyltransferase RsmB/F JAV55_08760 PF01029 NusB family JAV55_08765 PF04055 Radical SAM superfamily JAV55_08775 PF00069 Protein kinase domain JAV55_08775 PF03793 PASTA domain JAV55_08780 PF03193 RsgA GTPase JAV55_08780 PF16745 RsgA N-terminal domain JAV55_08785 PF00834 Ribulose-phosphate 3 epimerase family JAV55_08790 PF04263 Thiamin pyrophosphokinase, catalytic domain JAV55_08790 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain JAV55_08795 PF08183 Stage V sporulation protein family JAV55_08800 PF00830 Ribosomal L28 family JAV55_08805 PF03780 Asp23 family, cell envelope-related function JAV55_08810 PF02734 DAK2 domain JAV55_08810 PF13684 Dihydroxyacetone kinase family JAV55_08815 PF01842 ACT domain JAV55_08815 PF03315 Serine dehydratase beta chain JAV55_08820 PF03313 Serine dehydratase alpha chain JAV55_08825 PF00270 DEAD/DEAH box helicase JAV55_08825 PF00271 Helicase conserved C-terminal domain JAV55_08825 PF17191 RecG wedge domain JAV55_08830 PF08279 HTH domain JAV55_08830 PF03061 Thioesterase superfamily JAV55_08835 PF02504 Fatty acid synthesis protein JAV55_08840 PF00698 Acyl transferase domain JAV55_08850 PF00550 Phosphopantetheine attachment site JAV55_08855 PF00035 Double-stranded RNA binding motif JAV55_08855 PF14622 Ribonuclease-III-like JAV55_08860 PF06470 SMC proteins Flexible Hinge Domain JAV55_08860 PF02463 RecF/RecN/SMC N terminal domain JAV55_08865 PF00448 SRP54-type protein, GTPase domain JAV55_08865 PF02881 SRP54-type protein, helical bundle domain JAV55_08870 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JAV55_08875 PF00448 SRP54-type protein, GTPase domain JAV55_08875 PF02881 SRP54-type protein, helical bundle domain JAV55_08875 PF02978 Signal peptide binding domain JAV55_08880 PF00886 Ribosomal protein S16 JAV55_08890 PF11068 YlqD protein JAV55_08895 PF01782 RimM N-terminal domain JAV55_08895 PF05239 PRC-barrel domain JAV55_08900 PF01746 tRNA (Guanine-1)-methyltransferase JAV55_08905 PF01245 Ribosomal protein L19 JAV55_08910 PF01926 50S ribosome-binding GTPase JAV55_08915 PF01351 Ribonuclease HII JAV55_08925 PF01312 FlhB HrpN YscU SpaS Family JAV55_08930 PF08442 ATP-grasp domain JAV55_08930 PF00549 CoA-ligase JAV55_08935 PF00549 CoA-ligase JAV55_08935 PF02629 CoA binding domain JAV55_08940 PF02481 DNA recombination-mediator protein A JAV55_08945 PF01751 Toprim domain JAV55_08945 PF01131 DNA topoisomerase JAV55_08945 PF01396 Topoisomerase DNA binding C4 zinc finger JAV55_08950 PF01134 Glucose inhibited division protein A JAV55_08955 PF02899 Phage integrase, N-terminal SAM-like domain JAV55_08955 PF00589 Phage integrase family JAV55_08960 PF00227 Proteasome subunit JAV55_08965 PF07724 AAA domain (Cdc48 subfamily) JAV55_08965 PF10431 C-terminal, D2-small domain, of ClpB protein JAV55_08965 PF00004 ATPase family associated with various cellular activities (AAA) JAV55_08970 PF08222 CodY helix-turn-helix domain JAV55_08970 PF06018 CodY GAF-like domain JAV55_08975 PF00460 Flagella basal body rod protein JAV55_08980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JAV55_08980 PF00460 Flagella basal body rod protein JAV55_08985 PF02049 Flagellar hook-basal body complex protein FliE JAV55_08990 PF01514 Secretory protein of YscJ/FliF family JAV55_08990 PF08345 Flagellar M-ring protein C-terminal JAV55_08995 PF14841 FliG middle domain JAV55_08995 PF14842 FliG N-terminal domain JAV55_08995 PF01706 FliG C-terminal domain JAV55_09000 PF02108 Flagellar assembly protein FliH JAV55_09005 PF02874 ATP synthase alpha/beta family, beta-barrel domain JAV55_09005 PF18269 T3SS EscN ATPase C-terminal domain JAV55_09005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JAV55_09010 PF02050 Flagellar FliJ protein JAV55_09020 PF02120 Flagellar hook-length control protein FliK JAV55_09025 PF03963 Flagellar hook capping protein - N-terminal region JAV55_09030 PF00460 Flagella basal body rod protein JAV55_09030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JAV55_09035 PF06289 Flagellar and Swarming motility proteins JAV55_09040 PF03748 Flagellar basal body-associated protein FliL JAV55_09045 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JAV55_09045 PF02154 Flagellar motor switch protein FliM JAV55_09050 PF04509 CheC-like family JAV55_09050 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JAV55_09055 PF00072 Response regulator receiver domain JAV55_09060 PF04347 Flagellar biosynthesis protein, FliO JAV55_09065 PF00813 FliP family JAV55_09070 PF01313 Bacterial export proteins, family 3 JAV55_09075 PF01311 Bacterial export proteins, family 1 JAV55_09080 PF01312 FlhB HrpN YscU SpaS Family JAV55_09085 PF00771 FHIPEP family JAV55_09090 PF00448 SRP54-type protein, GTPase domain JAV55_09095 PF10609 NUBPL iron-transfer P-loop NTPase JAV55_09100 PF01339 CheB methylesterase JAV55_09100 PF00072 Response regulator receiver domain JAV55_09105 PF01584 CheW-like domain JAV55_09105 PF02895 Signal transducing histidine kinase, homodimeric domain JAV55_09105 PF01627 Hpt domain JAV55_09105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_09105 PF07194 P2 response regulator binding domain JAV55_09110 PF01584 CheW-like domain JAV55_09115 PF04509 CheC-like family JAV55_09120 PF03975 CheD chemotactic sensory transduction JAV55_09125 PF04545 Sigma-70, region 4 JAV55_09125 PF04542 Sigma-70 region 2 JAV55_09125 PF04539 Sigma-70 region 3 JAV55_09135 PF00318 Ribosomal protein S2 JAV55_09140 PF00889 Elongation factor TS JAV55_09145 PF00696 Amino acid kinase family JAV55_09150 PF01765 Ribosome recycling factor JAV55_09155 PF01255 Putative undecaprenyl diphosphate synthase JAV55_09165 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JAV55_09165 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JAV55_09165 PF13288 DXP reductoisomerase C-terminal domain JAV55_09170 PF02163 Peptidase family M50 JAV55_09170 PF17820 PDZ domain JAV55_09175 PF03129 Anticodon binding domain JAV55_09175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JAV55_09175 PF04073 Aminoacyl-tRNA editing domain JAV55_09180 PF02811 PHP domain JAV55_09180 PF00929 Exonuclease JAV55_09180 PF11490 DNA polymerase III polC-type N-terminus II JAV55_09180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JAV55_09180 PF14480 DNA polymerase III polC-type N-terminus I JAV55_09180 PF14579 Helix-hairpin-helix motif JAV55_09180 PF07733 Bacterial DNA polymerase III alpha NTPase domain JAV55_09185 PF00942 Cellulose binding domain JAV55_09185 PF00759 Glycosyl hydrolase family 9 JAV55_09190 PF02011 Glycosyl hydrolase family 48 JAV55_09190 PF00942 Cellulose binding domain JAV55_09190 PF00759 Glycosyl hydrolase family 9 JAV55_09195 PF00150 Cellulase (glycosyl hydrolase family 5) JAV55_09195 PF03442 Carbohydrate binding domain X2 JAV55_09195 PF18448 Carbohydrate binding domain JAV55_09205 PF17384 RimP C-terminal SH3 domain JAV55_09205 PF02576 RimP N-terminal domain JAV55_09210 PF13184 NusA-like KH domain JAV55_09210 PF00575 S1 RNA binding domain JAV55_09210 PF08529 NusA N-terminal domain JAV55_09215 PF04296 Protein of unknown function (DUF448) JAV55_09220 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JAV55_09225 PF11987 Translation-initiation factor 2 JAV55_09225 PF00009 Elongation factor Tu GTP binding domain JAV55_09225 PF04760 Translation initiation factor IF-2, N-terminal region JAV55_09230 PF04456 Protein of unknown function (DUF503) JAV55_09235 PF02033 Ribosome-binding factor A JAV55_09240 PF16198 tRNA pseudouridylate synthase B C-terminal domain JAV55_09240 PF01509 TruB family pseudouridylate synthase (N terminal domain) JAV55_09245 PF06574 FAD synthetase JAV55_09245 PF01687 Riboflavin kinase JAV55_09250 PF00312 Ribosomal protein S15 JAV55_09255 PF01138 3' exoribonuclease family, domain 1 JAV55_09255 PF00013 KH domain JAV55_09255 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JAV55_09255 PF03725 3' exoribonuclease family, domain 2 JAV55_09255 PF00575 S1 RNA binding domain JAV55_09260 PF01522 Polysaccharide deacetylase JAV55_09265 PF05193 Peptidase M16 inactive domain JAV55_09265 PF00675 Insulinase (Peptidase family M16) JAV55_09270 PF05239 PRC-barrel domain JAV55_09275 PF16924 Dipicolinate synthase subunit A N-terminal domain JAV55_09275 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JAV55_09280 PF02441 Flavoprotein JAV55_09285 PF01118 Semialdehyde dehydrogenase, NAD binding domain JAV55_09285 PF02774 Semialdehyde dehydrogenase, dimerisation domain JAV55_09290 PF00696 Amino acid kinase family JAV55_09290 PF13840 ACT domain JAV55_09295 PF00701 Dihydrodipicolinate synthetase family JAV55_09300 PF17770 Ribonuclease J C-terminal domain JAV55_09300 PF00753 Metallo-beta-lactamase superfamily JAV55_09300 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JAV55_09305 PF00574 Clp protease JAV55_09310 PF14035 YlzJ-like protein JAV55_09315 PF17854 FtsK alpha domain JAV55_09315 PF09397 Ftsk gamma domain JAV55_09315 PF01580 FtsK/SpoIIIE family JAV55_09320 PF07702 UTRA domain JAV55_09320 PF00392 Bacterial regulatory proteins, gntR family JAV55_09325 PF07690 Major Facilitator Superfamily JAV55_09330 PF05193 Peptidase M16 inactive domain JAV55_09335 PF00675 Insulinase (Peptidase family M16) JAV55_09335 PF05193 Peptidase M16 inactive domain JAV55_09345 PF11588 Protein of unknown function (DUF3243) JAV55_09350 PF11868 Protein of unknown function (DUF3388) JAV55_09355 PF13464 Domain of unknown function (DUF4115) JAV55_09360 PF01066 CDP-alcohol phosphatidyltransferase JAV55_09365 PF02464 Competence-damaged protein JAV55_09365 PF00994 Probable molybdopterin binding domain JAV55_09365 PF18146 Damage-inducible protein CinA KH domain JAV55_09370 PF00154 recA bacterial DNA recombination protein JAV55_09375 PF12072 Domain of unknown function (DUF3552) JAV55_09375 PF00013 KH domain JAV55_09375 PF01966 HD domain JAV55_09380 PF13277 YmdB-like protein JAV55_09385 PF04232 Stage V sporulation protein S (SpoVS) JAV55_09390 PF01244 Membrane dipeptidase (Peptidase family M19) JAV55_09395 PF00107 Zinc-binding dehydrogenase JAV55_09395 PF08240 Alcohol dehydrogenase GroES-like domain JAV55_09400 PF00155 Aminotransferase class I and II JAV55_09405 PF01938 TRAM domain JAV55_09405 PF04055 Radical SAM superfamily JAV55_09405 PF00919 Uncharacterized protein family UPF0004 JAV55_09410 PF06133 Control of competence regulator ComK, YlbF/YmcA JAV55_09415 PF10628 Outer spore coat protein E (CotE) JAV55_09420 PF05188 MutS domain II JAV55_09420 PF01624 MutS domain I JAV55_09420 PF05192 MutS domain III JAV55_09420 PF05190 MutS family domain IV JAV55_09420 PF00488 MutS domain V JAV55_09425 PF08676 MutL C terminal dimerisation domain JAV55_09425 PF01119 DNA mismatch repair protein, C-terminal domain JAV55_09430 PF03992 Antibiotic biosynthesis monooxygenase JAV55_09435 PF14449 Pre-toxin TG JAV55_09435 PF04740 LXG domain of WXG superfamily JAV55_09450 PF02492 CobW/HypB/UreG, nucleotide-binding domain JAV55_09450 PF07683 Cobalamin synthesis protein cobW C-terminal domain JAV55_09460 PF00583 Acetyltransferase (GNAT) family JAV55_09480 PF06912 Protein of unknown function (DUF1275) JAV55_09485 PF03471 Transporter associated domain JAV55_09485 PF00999 Sodium/hydrogen exchanger family JAV55_09485 PF02080 TrkA-C domain JAV55_09505 PF01906 Putative heavy-metal-binding JAV55_09510 PF09335 SNARE associated Golgi protein JAV55_09515 PF00144 Beta-lactamase JAV55_09515 PF11954 Domain of unknown function (DUF3471) JAV55_09520 PF04101 Glycosyltransferase family 28 C-terminal domain JAV55_09525 PF13520 Amino acid permease JAV55_09530 PF07875 Coat F domain JAV55_09540 PF01476 LysM domain JAV55_09540 PF00704 Glycosyl hydrolases family 18 JAV55_09545 PF00440 Bacterial regulatory proteins, tetR family JAV55_09550 PF12680 SnoaL-like domain JAV55_09555 PF01370 NAD dependent epimerase/dehydratase family JAV55_09565 PF02566 OsmC-like protein JAV55_09570 PF00893 Small Multidrug Resistance protein JAV55_09575 PF00893 Small Multidrug Resistance protein JAV55_09585 PF12788 YmaF family JAV55_09595 PF17209 Hfq protein JAV55_09605 PF07972 NrdI Flavodoxin like JAV55_09610 PF02867 Ribonucleotide reductase, barrel domain JAV55_09610 PF00317 Ribonucleotide reductase, all-alpha domain JAV55_09610 PF08343 Ribonucleotide reductase N-terminal JAV55_09615 PF00268 Ribonucleotide reductase, small chain JAV55_09625 PF00753 Metallo-beta-lactamase superfamily JAV55_09630 PF01592 NifU-like N terminal domain JAV55_09635 PF01475 Ferric uptake regulator family JAV55_09640 PF07729 FCD domain JAV55_09640 PF00392 Bacterial regulatory proteins, gntR family JAV55_09645 PF13536 Putative multidrug resistance efflux transporter JAV55_09650 PF01520 N-acetylmuramoyl-L-alanine amidase JAV55_09650 PF05036 Sporulation related domain JAV55_09675 PF00440 Bacterial regulatory proteins, tetR family JAV55_09690 PF05378 Hydantoinase/oxoprolinase N-terminal region JAV55_09690 PF01968 Hydantoinase/oxoprolinase JAV55_09700 PF02538 Hydantoinase B/oxoprolinase JAV55_09720 PF17866 AAA lid domain JAV55_09720 PF00004 ATPase family associated with various cellular activities (AAA) JAV55_09725 PF13167 GTP-binding GTPase N-terminal JAV55_09725 PF16360 GTP-binding GTPase Middle Region JAV55_09725 PF01926 50S ribosome-binding GTPase JAV55_09730 PF06838 Methionine gamma-lyase JAV55_09735 PF13411 MerR HTH family regulatory protein JAV55_09740 PF03951 Glutamine synthetase, beta-Grasp domain JAV55_09740 PF00120 Glutamine synthetase, catalytic domain JAV55_09765 PF01230 HIT domain JAV55_09795 PF16302 Domain of unknown function (DUF4944) JAV55_09820 PF00440 Bacterial regulatory proteins, tetR family JAV55_09820 PF17934 Tetracyclin repressor-like, C-terminal domain JAV55_09825 PF00893 Small Multidrug Resistance protein JAV55_09830 PF00893 Small Multidrug Resistance protein JAV55_09835 PF13302 Acetyltransferase (GNAT) domain JAV55_09855 PF05067 Manganese containing catalase JAV55_09875 PF08360 QacR-like protein, C-terminal region JAV55_09875 PF00440 Bacterial regulatory proteins, tetR family JAV55_09880 PF01047 MarR family JAV55_09885 PF00881 Nitroreductase family JAV55_09890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JAV55_09895 PF01613 Flavin reductase like domain JAV55_09900 PF03358 NADPH-dependent FMN reductase JAV55_09920 PF00303 Thymidylate synthase JAV55_09925 PF14040 Deoxyribonuclease NucA/NucB JAV55_09930 PF01726 LexA DNA binding domain JAV55_09930 PF00717 Peptidase S24-like JAV55_09935 PF01476 LysM domain JAV55_09940 PF00239 Resolvase, N terminal domain JAV55_09945 PF05979 Bacterial protein of unknown function (DUF896) JAV55_09950 PF02779 Transketolase, pyrimidine binding domain JAV55_09950 PF02780 Transketolase, C-terminal domain JAV55_09950 PF00456 Transketolase, thiamine diphosphate binding domain JAV55_09955 PF10747 Sporulation inhibitor of replication protein SirA JAV55_09960 PF03672 Uncharacterised protein family (UPF0154) JAV55_09965 PF09388 Spo0E like sporulation regulatory protein JAV55_09970 PF02683 Cytochrome C biogenesis protein transmembrane region JAV55_09975 PF00072 Response regulator receiver domain JAV55_09980 PF07301 Protein of unknown function (DUF1453) JAV55_09985 PF11084 Protein of unknown function (DUF2621) JAV55_09995 PF08179 Small acid-soluble spore protein P family JAV55_10005 PF00330 Aconitase family (aconitate hydratase) JAV55_10005 PF00694 Aconitase C-terminal domain JAV55_10010 PF00578 AhpC/TSA family JAV55_10015 PF13040 Fur-regulated basic protein B JAV55_10020 PF08177 Small acid-soluble spore protein N family JAV55_10030 PF03061 Thioesterase superfamily JAV55_10055 PF01521 Iron-sulphur cluster biosynthesis JAV55_10060 PF02660 Glycerol-3-phosphate acyltransferase JAV55_10065 PF13380 CoA binding domain JAV55_10070 PF00204 DNA gyrase B JAV55_10070 PF00986 DNA gyrase B subunit, carboxyl terminus JAV55_10070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_10070 PF01751 Toprim domain JAV55_10075 PF03989 DNA gyrase C-terminal domain, beta-propeller JAV55_10075 PF00521 DNA gyrase/topoisomerase IV, subunit A JAV55_10080 PF00392 Bacterial regulatory proteins, gntR family JAV55_10090 PF00596 Class II Aldolase and Adducin N-terminal domain JAV55_10095 PF11762 L-arabinose isomerase C-terminal domain JAV55_10095 PF02610 L-arabinose isomerase JAV55_10100 PF00083 Sugar (and other) transporter JAV55_10105 PF00106 short chain dehydrogenase JAV55_10115 PF01235 Sodium:alanine symporter family JAV55_10125 PF02665 Nitrate reductase gamma subunit JAV55_10130 PF02613 Nitrate reductase delta subunit JAV55_10135 PF14711 Respiratory nitrate reductase beta C-terminal JAV55_10135 PF13247 4Fe-4S dicluster domain JAV55_10140 PF14710 Respiratory nitrate reductase alpha N-terminal JAV55_10140 PF01568 Molydopterin dinucleotide binding domain JAV55_10140 PF00384 Molybdopterin oxidoreductase JAV55_10155 PF13186 Iron-sulfur cluster-binding domain JAV55_10155 PF04055 Radical SAM superfamily JAV55_10165 PF14256 YwiC-like protein JAV55_10170 PF00027 Cyclic nucleotide-binding domain JAV55_10170 PF00325 Bacterial regulatory proteins, crp family JAV55_10175 PF07690 Major Facilitator Superfamily JAV55_10185 PF13545 Crp-like helix-turn-helix domain JAV55_10185 PF00027 Cyclic nucleotide-binding domain JAV55_10190 PF00115 Cytochrome C and Quinol oxidase polypeptide I JAV55_10195 PF04405 Domain of Unknown function (DUF542) JAV55_10195 PF01814 Hemerythrin HHE cation binding domain JAV55_10200 PF07098 Protein of unknown function (DUF1360) JAV55_10205 PF00942 Cellulose binding domain JAV55_10205 PF00150 Cellulase (glycosyl hydrolase family 5) JAV55_10210 PF17452 Uncharacterized YnfE-like JAV55_10215 PF13302 Acetyltransferase (GNAT) domain JAV55_10230 PF13229 Right handed beta helix region JAV55_10235 PF05525 Branched-chain amino acid transport protein JAV55_10245 PF13411 MerR HTH family regulatory protein JAV55_10255 PF12706 Beta-lactamase superfamily domain JAV55_10270 PF00378 Enoyl-CoA hydratase/isomerase JAV55_10275 PF00171 Aldehyde dehydrogenase family JAV55_10280 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JAV55_10280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JAV55_10285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JAV55_10285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JAV55_10285 PF02770 Acyl-CoA dehydrogenase, middle domain JAV55_10290 PF01238 Phosphomannose isomerase type I JAV55_10295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JAV55_10295 PF02378 Phosphotransferase system, EIIC JAV55_10295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JAV55_10315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JAV55_10315 PF08279 HTH domain JAV55_10315 PF05043 Mga helix-turn-helix domain JAV55_10315 PF00874 PRD domain JAV55_10325 PF00005 ABC transporter JAV55_10330 PF00392 Bacterial regulatory proteins, gntR family JAV55_10335 PF00106 short chain dehydrogenase JAV55_10340 PF03786 D-mannonate dehydratase (UxuA) JAV55_10345 PF16338 Domain of unknown function (DUF4968) JAV55_10345 PF13802 Galactose mutarotase-like JAV55_10345 PF01055 Glycosyl hydrolases family 31 JAV55_10345 PF17137 Domain of unknown function (DUF5110) JAV55_10350 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JAV55_10355 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JAV55_10360 PF03480 Bacterial extracellular solute-binding protein, family 7 JAV55_10365 PF00356 Bacterial regulatory proteins, lacI family JAV55_10370 PF01451 Low molecular weight phosphotyrosine protein phosphatase JAV55_10375 PF02040 Arsenical pump membrane protein JAV55_10380 PF01022 Bacterial regulatory protein, arsR family JAV55_10385 PF08818 Domain of unknown function (DU1801) JAV55_10395 PF06800 Sugar transport protein JAV55_10400 PF02638 Glycosyl hydrolase-like 10 JAV55_10410 PF04055 Radical SAM superfamily JAV55_10415 PF01228 Glycine radical JAV55_10415 PF02901 Pyruvate formate lyase-like JAV55_10420 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JAV55_10425 PF07992 Pyridine nucleotide-disulphide oxidoreductase JAV55_10430 PF07849 Protein of unknown function (DUF1641) JAV55_10435 PF12728 Helix-turn-helix domain JAV55_10445 PF16177 Acetyl-coenzyme A synthetase N-terminus JAV55_10445 PF13193 AMP-binding enzyme C-terminal domain JAV55_10445 PF00501 AMP-binding enzyme JAV55_10450 PF01039 Carboxyl transferase domain JAV55_10455 PF00378 Enoyl-CoA hydratase/isomerase JAV55_10460 PF00682 HMGL-like JAV55_10465 PF00364 Biotin-requiring enzyme JAV55_10470 PF00289 Biotin carboxylase, N-terminal domain JAV55_10470 PF02785 Biotin carboxylase C-terminal domain JAV55_10470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JAV55_10475 PF00501 AMP-binding enzyme JAV55_10475 PF13193 AMP-binding enzyme C-terminal domain JAV55_10480 PF02770 Acyl-CoA dehydrogenase, middle domain JAV55_10480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JAV55_10480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JAV55_10485 PF02525 Flavodoxin-like fold JAV55_10490 PF01638 HxlR-like helix-turn-helix JAV55_10495 PF00171 Aldehyde dehydrogenase family JAV55_10500 PF00696 Amino acid kinase family JAV55_10500 PF01472 PUA domain JAV55_10505 PF03807 NADP oxidoreductase coenzyme F420-dependent JAV55_10505 PF14748 Pyrroline-5-carboxylate reductase dimerisation JAV55_10510 PF04239 Protein of unknown function (DUF421) JAV55_10520 PF01384 Phosphate transporter family JAV55_10525 PF01507 Phosphoadenosine phosphosulfate reductase family JAV55_10530 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) JAV55_10535 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JAV55_10540 PF13378 Enolase C-terminal domain-like JAV55_10540 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JAV55_10545 PF07690 Major Facilitator Superfamily JAV55_10550 PF00535 Glycosyl transferase family 2 JAV55_10560 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JAV55_10560 PF07992 Pyridine nucleotide-disulphide oxidoreductase JAV55_10565 PF00310 Glutamine amidotransferases class-II JAV55_10565 PF04898 Glutamate synthase central domain JAV55_10565 PF01493 GXGXG motif JAV55_10565 PF01645 Conserved region in glutamate synthase JAV55_10570 PF03466 LysR substrate binding domain JAV55_10570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JAV55_10590 PF01047 MarR family JAV55_10595 PF00664 ABC transporter transmembrane region JAV55_10595 PF00005 ABC transporter JAV55_10600 PF00005 ABC transporter JAV55_10600 PF00664 ABC transporter transmembrane region JAV55_10605 PF00067 Cytochrome P450 JAV55_10610 PF00106 short chain dehydrogenase JAV55_10615 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JAV55_10615 PF00391 PEP-utilising enzyme, mobile domain JAV55_10620 PF07690 Major Facilitator Superfamily JAV55_10625 PF01568 Molydopterin dinucleotide binding domain JAV55_10625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JAV55_10625 PF00384 Molybdopterin oxidoreductase JAV55_10630 PF01047 MarR family JAV55_10640 PF03845 Spore germination protein JAV55_10645 PF05504 Spore germination B3/ GerAC like, C-terminal JAV55_10650 PF03845 Spore germination protein JAV55_10655 PF03845 Spore germination protein JAV55_10660 PF03323 Bacillus/Clostridium GerA spore germination protein JAV55_10665 PF12848 ABC transporter JAV55_10665 PF00005 ABC transporter JAV55_10670 PF02743 Cache domain JAV55_10670 PF00672 HAMP domain JAV55_10670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JAV55_10675 PF01588 Putative tRNA binding domain JAV55_10680 PF00082 Subtilase family JAV55_10690 PF17932 Tetracyclin repressor-like, C-terminal domain JAV55_10690 PF00440 Bacterial regulatory proteins, tetR family JAV55_10695 PF01047 MarR family JAV55_10710 PF14158 YndJ-like protein JAV55_10715 PF13761 Domain of unknown function (DUF4166) JAV55_10725 PF00440 Bacterial regulatory proteins, tetR family JAV55_10725 PF13305 Tetracyclin repressor-like, C-terminal domain JAV55_10735 PF06445 GyrI-like small molecule binding domain JAV55_10745 PF13280 WYL domain JAV55_10745 PF08279 HTH domain JAV55_10755 PF01022 Bacterial regulatory protein, arsR family JAV55_10770 PF00324 Amino acid permease JAV55_10780 PF02719 Polysaccharide biosynthesis protein JAV55_10795 PF00534 Glycosyl transferases group 1 JAV55_10800 PF04238 Protein of unknown function (DUF420) JAV55_10815 PF00474 Sodium:solute symporter family JAV55_10820 PF06725 3D domain JAV55_10820 PF01476 LysM domain JAV55_10825 PF00270 DEAD/DEAH box helicase JAV55_10825 PF00570 HRDC domain JAV55_10825 PF16124 RecQ zinc-binding JAV55_10825 PF09382 RQC domain JAV55_10825 PF00271 Helicase conserved C-terminal domain JAV55_10860 PF07849 Protein of unknown function (DUF1641) JAV55_10865 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JAV55_10865 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JAV55_10865 PF01568 Molydopterin dinucleotide binding domain JAV55_10865 PF00384 Molybdopterin oxidoreductase JAV55_10865 PF12838 4Fe-4S dicluster domain JAV55_10880 PF07238 PilZ domain JAV55_10880 PF12945 Flagellar protein YcgR JAV55_10900 PF13217 Protein of unknown function (DUF4025) JAV55_10905 PF05504 Spore germination B3/ GerAC like, C-terminal JAV55_10920 PF01979 Amidohydrolase family JAV55_10925 PF11122 Inner spore coat protein D JAV55_10935 PF08386 TAP-like protein JAV55_10935 PF00561 alpha/beta hydrolase fold JAV55_10945 PF11122 Inner spore coat protein D JAV55_10950 PF01810 LysE type translocator JAV55_10955 PF00253 Ribosomal protein S14p/S29e JAV55_10960 PF00293 NUDIX domain JAV55_10960 PF13344 Haloacid dehalogenase-like hydrolase JAV55_10965 PF00391 PEP-utilising enzyme, mobile domain JAV55_10965 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JAV55_10970 PF00440 Bacterial regulatory proteins, tetR family JAV55_10980 PF10710 Protein of unknown function (DUF2512) JAV55_10985 PF05163 DinB family JAV55_10990 PF02525 Flavodoxin-like fold JAV55_10995 PF01258 Prokaryotic dksA/traR C4-type zinc finger JAV55_11000 PF08000 Bacterial PH domain JAV55_11010 PF00171 Aldehyde dehydrogenase family JAV55_11015 PF07690 Major Facilitator Superfamily JAV55_11020 PF01636 Phosphotransferase enzyme family JAV55_11030 PF13249 Squalene-hopene cyclase N-terminal domain JAV55_11030 PF13243 Squalene-hopene cyclase C-terminal domain JAV55_11035 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JAV55_11035 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JAV55_11045 PF00209 Sodium:neurotransmitter symporter family JAV55_11050 PF01758 Sodium Bile acid symporter family JAV55_11055 PF02817 e3 binding domain JAV55_11055 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JAV55_11055 PF00364 Biotin-requiring enzyme JAV55_11060 PF16870 2-oxoglutarate dehydrogenase C-terminal JAV55_11060 PF02779 Transketolase, pyrimidine binding domain JAV55_11060 PF00676 Dehydrogenase E1 component JAV55_11065 PF00092 von Willebrand factor type A domain JAV55_11070 PF07728 AAA domain (dynein-related subfamily) JAV55_11075 PF13627 Prokaryotic lipoprotein-attachment site JAV55_11075 PF00080 Copper/zinc superoxide dismutase (SODC) JAV55_11080 PF00877 NlpC/P60 family JAV55_11080 PF01476 LysM domain JAV55_11085 PF01554 MatE JAV55_11090 PF02585 GlcNAc-PI de-N-acetylase JAV55_11095 PF08830 Protein of unknown function (DUF1806) JAV55_11105 PF00892 EamA-like transporter family JAV55_11115 PF03330 Lytic transglycolase JAV55_11130 PF01638 HxlR-like helix-turn-helix JAV55_11135 PF00881 Nitroreductase family JAV55_11140 PF01738 Dienelactone hydrolase family JAV55_11145 PF11755 Protein of unknown function (DUF3311) JAV55_11150 PF00474 Sodium:solute symporter family JAV55_11155 PF17820 PDZ domain JAV55_11155 PF01471 Putative peptidoglycan binding domain JAV55_11155 PF03572 Peptidase family S41 JAV55_11160 PF08241 Methyltransferase domain JAV55_11170 PF02557 D-alanyl-D-alanine carboxypeptidase JAV55_11175 PF01048 Phosphorylase superfamily JAV55_11180 PF03773 Predicted permease JAV55_11195 PF14191 YodL-like JAV55_11200 PF01569 PAP2 superfamily JAV55_11205 PF14162 YozD-like protein JAV55_11215 PF06855 YozE SAM-like fold JAV55_11220 PF14122 YokU-like protein, putative antitoxin JAV55_11225 PF12544 Lysine-2,3-aminomutase JAV55_11230 PF00583 Acetyltransferase (GNAT) family JAV55_11235 PF01546 Peptidase family M20/M25/M40 JAV55_11235 PF07687 Peptidase dimerisation domain JAV55_11240 PF01144 Coenzyme A transferase JAV55_11245 PF01144 Coenzyme A transferase JAV55_11250 PF00202 Aminotransferase class-III JAV55_11265 PF00583 Acetyltransferase (GNAT) family JAV55_11270 PF01641 SelR domain JAV55_11275 PF01625 Peptide methionine sulfoxide reductase JAV55_11280 PF01047 MarR family JAV55_11290 PF00990 Diguanylate cyclase, GGDEF domain JAV55_11290 PF07694 5TMR of 5TMR-LYT JAV55_11295 PF01554 MatE JAV55_11305 PF17431 Uncharacterized YmpT-like JAV55_11310 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) JAV55_11315 PF13472 GDSL-like Lipase/Acylhydrolase family JAV55_11320 PF02630 SCO1/SenC JAV55_11325 PF02645 Uncharacterised protein, DegV family COG1307 JAV55_11330 PF10751 Protein of unknown function (DUF2535) JAV55_11335 PF00585 C-terminal regulatory domain of Threonine dehydratase JAV55_11335 PF00291 Pyridoxal-phosphate dependent enzyme JAV55_11340 PF08461 Ribonuclease R winged-helix domain JAV55_11340 PF00158 Sigma-54 interaction domain JAV55_11345 PF03006 Haemolysin-III related JAV55_11355 PF00186 Dihydrofolate reductase JAV55_11360 PF04608 Phosphatidylglycerophosphatase A JAV55_11365 PF14005 YpjP-like protein JAV55_11370 PF04445 Putative SAM-dependent methyltransferase JAV55_11375 PF06491 Disulphide isomerase JAV55_11380 PF00920 Dehydratase family JAV55_11385 PF13769 Virulence factor JAV55_11385 PF08712 Scaffold protein Nfu/NifU N terminal JAV55_11390 PF01966 HD domain JAV55_11395 PF00255 Glutathione peroxidase JAV55_11400 PF01268 Formate--tetrahydrofolate ligase JAV55_11405 PF04204 Homoserine O-succinyltransferase JAV55_11410 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JAV55_11410 PF00534 Glycosyl transferases group 1 JAV55_11420 PF00313 'Cold-shock' DNA-binding domain JAV55_11430 PF10819 Protein of unknown function (DUF2564) JAV55_11435 PF10782 Zinc-finger JAV55_11440 PF13456 Reverse transcriptase-like JAV55_11445 PF02592 Putative vitamin uptake transporter JAV55_11450 PF13456 Reverse transcriptase-like JAV55_11460 PF01367 5'-3' exonuclease, C-terminal SAM fold JAV55_11460 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JAV55_11470 PF10752 Protein of unknown function (DUF2533) JAV55_11475 PF00350 Dynamin family JAV55_11485 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family JAV55_11490 PF02797 Chalcone and stilbene synthases, C-terminal domain JAV55_11490 PF00195 Chalcone and stilbene synthases, N-terminal domain JAV55_11495 PF00583 Acetyltransferase (GNAT) family JAV55_11500 PF00860 Permease family JAV55_11505 PF00156 Phosphoribosyl transferase domain JAV55_11510 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JAV55_11515 PF13307 Helicase C-terminal domain JAV55_11530 PF01170 Putative RNA methylase family UPF0020 JAV55_11530 PF02926 THUMP domain JAV55_11540 PF05103 DivIVA protein JAV55_11545 PF06908 YspA SLOG family JAV55_11550 PF11122 Inner spore coat protein D JAV55_11555 PF13482 RNase_H superfamily JAV55_11560 PF00271 Helicase conserved C-terminal domain JAV55_11560 PF09369 Domain of unknown function (DUF1998) JAV55_11560 PF00270 DEAD/DEAH box helicase JAV55_11565 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JAV55_11575 PF14179 YppG-like protein JAV55_11580 PF14178 YppF-like protein JAV55_11585 PF08807 Bacterial domain of unknown function (DUF1798) JAV55_11600 PF10720 Protein of unknown function (DUF2515) JAV55_11605 PF03838 Recombination protein U JAV55_11610 PF00905 Penicillin binding protein transpeptidase domain JAV55_11610 PF00912 Transglycosylase JAV55_11620 PF00730 HhH-GPD superfamily base excision DNA repair protein JAV55_11620 PF00633 Helix-hairpin-helix motif JAV55_11620 PF10576 Iron-sulfur binding domain of endonuclease III JAV55_11625 PF07261 Replication initiation and membrane attachment JAV55_11630 PF01336 OB-fold nucleic acid binding domain JAV55_11630 PF00152 tRNA synthetases class II (D, K and N) JAV55_11635 PF00155 Aminotransferase class I and II JAV55_11640 PF17881 Domain of unknown function (DUF5590) JAV55_11640 PF03413 Peptidase propeptide and YPEB domain JAV55_11645 PF14084 Protein of unknown function (DUF4264) JAV55_11650 PF13307 Helicase C-terminal domain JAV55_11650 PF04851 Type III restriction enzyme, res subunit JAV55_11650 PF00929 Exonuclease JAV55_11655 PF02261 Aspartate decarboxylase JAV55_11660 PF02569 Pantoate-beta-alanine ligase JAV55_11665 PF02548 Ketopantoate hydroxymethyltransferase JAV55_11670 PF08279 HTH domain JAV55_11670 PF03099 Biotin/lipoate A/B protein ligase family JAV55_11670 PF02237 Biotin protein ligase C terminal domain JAV55_11675 PF13735 tRNA nucleotidyltransferase domain 2 putative JAV55_11675 PF01743 Poly A polymerase head domain JAV55_11675 PF12627 Probable RNA and SrmB- binding site of polymerase A JAV55_11680 PF13439 Glycosyltransferase Family 4 JAV55_11680 PF00534 Glycosyl transferases group 1 JAV55_11685 PF02585 GlcNAc-PI de-N-acetylase JAV55_11690 PF02142 MGS-like domain JAV55_11695 PF01113 Dihydrodipicolinate reductase, N-terminus JAV55_11695 PF05173 Dihydrodipicolinate reductase, C-terminus JAV55_11700 PF03819 MazG nucleotide pyrophosphohydrolase domain JAV55_11705 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JAV55_11705 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JAV55_11710 PF09577 Sporulation protein YpjB (SpoYpjB) JAV55_11715 PF07187 Protein of unknown function (DUF1405) JAV55_11725 PF00032 Cytochrome b(C-terminal)/b6/petD JAV55_11725 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JAV55_11730 PF00033 Cytochrome b/b6/petB JAV55_11735 PF00355 Rieske [2Fe-2S] domain JAV55_11740 PF10673 Protein of unknown function (DUF2487) JAV55_11745 PF08864 UPF0302 domain JAV55_11745 PF08858 IDEAL domain JAV55_11755 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JAV55_11760 PF01842 ACT domain JAV55_11760 PF02153 Prephenate dehydrogenase JAV55_11765 PF00155 Aminotransferase class I and II JAV55_11770 PF00290 Tryptophan synthase alpha chain JAV55_11775 PF00291 Pyridoxal-phosphate dependent enzyme JAV55_11780 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JAV55_11785 PF00218 Indole-3-glycerol phosphate synthase JAV55_11790 PF00591 Glycosyl transferase family, a/b domain JAV55_11790 PF02885 Glycosyl transferase family, helical bundle domain JAV55_11795 PF04715 Anthranilate synthase component I, N terminal region JAV55_11795 PF00425 chorismate binding enzyme JAV55_11800 PF07736 Chorismate mutase type I JAV55_11805 PF01761 3-dehydroquinate synthase JAV55_11810 PF01264 Chorismate synthase JAV55_11815 PF01739 CheR methyltransferase, SAM binding domain JAV55_11815 PF03705 CheR methyltransferase, all-alpha domain JAV55_11820 PF00334 Nucleoside diphosphate kinase JAV55_11825 PF00348 Polyprenyl synthetase JAV55_11830 PF01209 ubiE/COQ5 methyltransferase family JAV55_11835 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 JAV55_11840 PF02081 Tryptophan RNA-binding attenuator protein JAV55_11845 PF01227 GTP cyclohydrolase I JAV55_11850 PF00216 Bacterial DNA-binding protein JAV55_11855 PF09547 Stage IV sporulation protein A (spore_IV_A) JAV55_11865 PF10966 Protein of unknown function (DUF2768) JAV55_11870 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JAV55_11870 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JAV55_11875 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JAV55_11875 PF01926 50S ribosome-binding GTPase JAV55_11885 PF14045 YIEGIA protein JAV55_11895 PF14140 YpzI-like protein JAV55_11900 PF01070 FMN-dependent dehydrogenase JAV55_11905 PF00575 S1 RNA binding domain JAV55_11910 PF02224 Cytidylate kinase JAV55_11915 PF17313 Family of unknown function (DUF5359) JAV55_11920 PF14620 YpeB sporulation JAV55_11920 PF03413 Peptidase propeptide and YPEB domain JAV55_11925 PF07486 Cell Wall Hydrolase JAV55_11925 PF01471 Putative peptidoglycan binding domain JAV55_11930 PF13367 PrsW family intramembrane metalloprotease JAV55_11935 PF00710 Asparaginase, N-terminal JAV55_11935 PF17763 Glutaminase/Asparaginase C-terminal domain JAV55_11945 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JAV55_11945 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JAV55_11980 PF14493 Helix-turn-helix domain JAV55_11990 PF12822 ECF transporter, substrate-specific component JAV55_12000 PF01551 Peptidase family M23 JAV55_12000 PF04225 Opacity-associated protein A LysM-like domain JAV55_12010 PF08281 Sigma-70, region 4 JAV55_12010 PF04542 Sigma-70 region 2 JAV55_12030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_12030 PF00512 His Kinase A (phospho-acceptor) domain JAV55_12035 PF00072 Response regulator receiver domain JAV55_12035 PF00486 Transcriptional regulatory protein, C terminal JAV55_12040 PF00512 His Kinase A (phospho-acceptor) domain JAV55_12040 PF00989 PAS fold JAV55_12040 PF18698 Histidine kinase sensor domain JAV55_12040 PF00672 HAMP domain JAV55_12040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_12045 PF00486 Transcriptional regulatory protein, C terminal JAV55_12045 PF00072 Response regulator receiver domain JAV55_12050 PF01578 Cytochrome C assembly protein JAV55_12055 PF05140 ResB-like family JAV55_12060 PF00578 AhpC/TSA family JAV55_12065 PF00849 RNA pseudouridylate synthase JAV55_12065 PF01479 S4 domain JAV55_12070 PF07670 Nucleoside recognition JAV55_12075 PF07670 Nucleoside recognition JAV55_12080 PF00768 D-alanyl-D-alanine carboxypeptidase JAV55_12080 PF07943 Penicillin-binding protein 5, C-terminal domain JAV55_12085 PF13047 Protein of unknown function (DUF3907) JAV55_12090 PF04079 Segregation and condensation complex subunit ScpB JAV55_12095 PF02616 Segregation and condensation protein ScpA JAV55_12105 PF03745 Domain of unknown function (DUF309) JAV55_12110 PF00583 Acetyltransferase (GNAT) family JAV55_12115 PF00885 6,7-dimethyl-8-ribityllumazine synthase JAV55_12120 PF00925 GTP cyclohydrolase II JAV55_12120 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JAV55_12125 PF00677 Lumazine binding domain JAV55_12130 PF01872 RibD C-terminal domain JAV55_12130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JAV55_12140 PF00149 Calcineurin-like phosphoesterase JAV55_12145 PF00011 Hsp20/alpha crystallin family JAV55_12155 PF18801 response regulator aspartate phosphatase H, N terminal JAV55_12160 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JAV55_12165 PF06207 Protein of unknown function (DUF1002) JAV55_12170 PF05908 Poly-gamma-glutamate hydrolase JAV55_12175 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JAV55_12175 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JAV55_12190 PF03323 Bacillus/Clostridium GerA spore germination protein JAV55_12195 PF14097 Stage V sporulation protein AE1 JAV55_12200 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JAV55_12205 PF07451 Stage V sporulation protein AD (SpoVAD) JAV55_12210 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JAV55_12215 PF13782 Stage V sporulation protein AB JAV55_12220 PF12164 Stage V sporulation protein AA JAV55_12225 PF04545 Sigma-70, region 4 JAV55_12225 PF04539 Sigma-70 region 3 JAV55_12225 PF04542 Sigma-70 region 2 JAV55_12230 PF13581 Histidine kinase-like ATPase domain JAV55_12235 PF01740 STAS domain JAV55_12240 PF07943 Penicillin-binding protein 5, C-terminal domain JAV55_12240 PF00768 D-alanyl-D-alanine carboxypeptidase JAV55_12245 PF01048 Phosphorylase superfamily JAV55_12250 PF01676 Metalloenzyme superfamily JAV55_12255 PF00589 Phage integrase family JAV55_12255 PF02899 Phage integrase, N-terminal SAM-like domain JAV55_12260 PF14004 Protein of unknown function (DUF4227) JAV55_12265 PF01475 Ferric uptake regulator family JAV55_12270 PF01944 Stage II sporulation protein M JAV55_12275 PF02378 Phosphotransferase system, EIIC JAV55_12280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JAV55_12295 PF13673 Acetyltransferase (GNAT) domain JAV55_12305 PF00293 NUDIX domain JAV55_12310 PF13072 Mother cell inhibitor of FtsZ JAV55_12315 PF00440 Bacterial regulatory proteins, tetR family JAV55_12320 PF13564 DoxX-like family JAV55_12325 PF00248 Aldo/keto reductase family JAV55_12335 PF12146 Serine aminopeptidase, S33 JAV55_12340 PF10827 Protein of unknown function (DUF2552) JAV55_12345 PF01521 Iron-sulphur cluster biosynthesis JAV55_12360 PF03992 Antibiotic biosynthesis monooxygenase JAV55_12365 PF01674 Lipase (class 2) JAV55_12375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JAV55_12380 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_12385 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_12390 PF00005 ABC transporter JAV55_12395 PF00005 ABC transporter JAV55_12395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JAV55_12400 PF01554 MatE JAV55_12410 PF08863 YolD-like protein JAV55_12415 PF11798 IMS family HHH motif JAV55_12415 PF11799 impB/mucB/samB family C-terminal domain JAV55_12415 PF00817 impB/mucB/samB family JAV55_12420 PF14164 YqzH-like protein JAV55_12425 PF07690 Major Facilitator Superfamily JAV55_12435 PF00485 Phosphoribulokinase / Uridine kinase family JAV55_12445 PF00005 ABC transporter JAV55_12465 PF05908 Poly-gamma-glutamate hydrolase JAV55_12470 PF00106 short chain dehydrogenase JAV55_12475 PF00753 Metallo-beta-lactamase superfamily JAV55_12480 PF14748 Pyrroline-5-carboxylate reductase dimerisation JAV55_12480 PF03807 NADP oxidoreductase coenzyme F420-dependent JAV55_12485 PF01546 Peptidase family M20/M25/M40 JAV55_12490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JAV55_12495 PF12146 Serine aminopeptidase, S33 JAV55_12500 PF00471 Ribosomal protein L33 JAV55_12505 PF12706 Beta-lactamase superfamily domain JAV55_12505 PF00753 Metallo-beta-lactamase superfamily JAV55_12510 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JAV55_12510 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JAV55_12525 PF16868 NMT1-like family JAV55_12530 PF07702 UTRA domain JAV55_12530 PF00392 Bacterial regulatory proteins, gntR family JAV55_12535 PF00232 Glycosyl hydrolase family 1 JAV55_12540 PF02378 Phosphotransferase system, EIIC JAV55_12545 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JAV55_12550 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JAV55_12555 PF00245 Alkaline phosphatase JAV55_12565 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JAV55_12565 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JAV55_12570 PF00817 impB/mucB/samB family JAV55_12570 PF11799 impB/mucB/samB family C-terminal domain JAV55_12570 PF11798 IMS family HHH motif JAV55_12580 PF02096 60Kd inner membrane protein JAV55_12585 PF01546 Peptidase family M20/M25/M40 JAV55_12585 PF07687 Peptidase dimerisation domain JAV55_12590 PF01039 Carboxyl transferase domain JAV55_12600 PF11728 Putative aromatic acid exporter C-terminal domain JAV55_12600 PF06081 Aromatic acid exporter family member 1 JAV55_12605 PF00005 ABC transporter JAV55_12610 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_12615 PF00497 Bacterial extracellular solute-binding proteins, family 3 JAV55_12625 PF06491 Disulphide isomerase JAV55_12630 PF00781 Diacylglycerol kinase catalytic domain JAV55_12635 PF00364 Biotin-requiring enzyme JAV55_12635 PF02817 e3 binding domain JAV55_12635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JAV55_12640 PF02780 Transketolase, C-terminal domain JAV55_12640 PF02779 Transketolase, pyrimidine binding domain JAV55_12645 PF00676 Dehydrogenase E1 component JAV55_12650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JAV55_12650 PF07992 Pyridine nucleotide-disulphide oxidoreductase JAV55_12655 PF00871 Acetokinase family JAV55_12660 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JAV55_12660 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JAV55_12665 PF01515 Phosphate acetyl/butaryl transferase JAV55_12670 PF00158 Sigma-54 interaction domain JAV55_12670 PF02954 Bacterial regulatory protein, Fis family JAV55_12670 PF00989 PAS fold JAV55_12675 PF11118 Protein of unknown function (DUF2627) JAV55_12680 PF03009 Glycerophosphoryl diester phosphodiesterase family JAV55_12685 PF01520 N-acetylmuramoyl-L-alanine amidase JAV55_12700 PF00132 Bacterial transferase hexapeptide (six repeats) JAV55_12700 PF06426 Serine acetyltransferase, N-terminal JAV55_12710 PF00072 Response regulator receiver domain JAV55_12710 PF08769 Sporulation initiation factor Spo0A C terminal JAV55_12715 PF05580 SpoIVB peptidase S55 JAV55_12715 PF17820 PDZ domain JAV55_12720 PF13476 AAA domain JAV55_12725 PF02863 Arginine repressor, C-terminal domain JAV55_12725 PF01316 Arginine repressor, DNA binding domain JAV55_12730 PF01728 FtsJ-like methyltransferase JAV55_12730 PF01479 S4 domain JAV55_12735 PF02779 Transketolase, pyrimidine binding domain JAV55_12735 PF02780 Transketolase, C-terminal domain JAV55_12735 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JAV55_12740 PF00348 Polyprenyl synthetase JAV55_12745 PF02609 Exonuclease VII small subunit JAV55_12750 PF02601 Exonuclease VII, large subunit JAV55_12750 PF13742 OB-fold nucleic acid binding domain JAV55_12755 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JAV55_12755 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JAV55_12760 PF01029 NusB family JAV55_12765 PF03780 Asp23 family, cell envelope-related function JAV55_12770 PF00289 Biotin carboxylase, N-terminal domain JAV55_12770 PF02785 Biotin carboxylase C-terminal domain JAV55_12770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JAV55_12775 PF00364 Biotin-requiring enzyme JAV55_12780 PF12685 SpoIIIAH-like protein JAV55_12790 PF09581 Stage III sporulation protein AF (Spore_III_AF) JAV55_12795 PF09546 Stage III sporulation protein AE (spore_III_AE) JAV55_12800 PF06686 Stage III sporulation protein AC/AD protein family JAV55_12805 PF06686 Stage III sporulation protein AC/AD protein family JAV55_12810 PF09548 Stage III sporulation protein AB (spore_III_AB) JAV55_12820 PF10942 Protein of unknown function (DUF2619) JAV55_12825 PF09285 Elongation factor P, C-terminal JAV55_12825 PF08207 Elongation factor P (EF-P) KOW-like domain JAV55_12825 PF01132 Elongation factor P (EF-P) OB domain JAV55_12830 PF00557 Metallopeptidase family M24 JAV55_12830 PF01321 Creatinase/Prolidase N-terminal domain JAV55_12835 PF01220 Dehydroquinase class II JAV55_12840 PF11085 Conserved membrane protein YqhR JAV55_12845 PF07136 Protein of unknown function (DUF1385) JAV55_12855 PF01734 Patatin-like phospholipase JAV55_12860 PF01325 Iron dependent repressor, N-terminal DNA binding domain JAV55_12860 PF02742 Iron dependent repressor, metal binding and dimerisation domain JAV55_12865 PF03099 Biotin/lipoate A/B protein ligase family JAV55_12870 PF00581 Rhodanese-like domain JAV55_12875 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JAV55_12880 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_12885 PF00571 CBS domain JAV55_12885 PF00005 ABC transporter JAV55_12890 PF02347 Glycine cleavage system P-protein JAV55_12895 PF02347 Glycine cleavage system P-protein JAV55_12900 PF01571 Aminomethyltransferase folate-binding domain JAV55_12900 PF08669 Glycine cleavage T-protein C-terminal barrel domain JAV55_12905 PF00176 SNF2 family N-terminal domain JAV55_12905 PF00271 Helicase conserved C-terminal domain JAV55_12910 PF11079 Bacterial protein YqhG of unknown function JAV55_12915 PF08671 Anti-repressor SinI JAV55_12920 PF01381 Helix-turn-helix JAV55_12920 PF08671 Anti-repressor SinI JAV55_12925 PF12389 Camelysin metallo-endopeptidase JAV55_12940 PF13028 Protein of unknown function (DUF3889) JAV55_12945 PF14038 YqzE-like protein JAV55_12955 PF15980 Putative Competence protein ComGF JAV55_12965 PF07963 Prokaryotic N-terminal methylation motif JAV55_12970 PF07963 Prokaryotic N-terminal methylation motif JAV55_12975 PF00482 Type II secretion system (T2SS), protein F JAV55_12980 PF00437 Type II/IV secretion system protein JAV55_12985 PF01740 STAS domain JAV55_12985 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain JAV55_12995 PF03960 ArsC family JAV55_13000 PF11117 Protein of unknown function (DUF2626) JAV55_13005 PF00753 Metallo-beta-lactamase superfamily JAV55_13010 PF10958 Protein of unknown function (DUF2759) JAV55_13015 PF01910 Thiamine-binding protein JAV55_13025 PF00246 Zinc carboxypeptidase JAV55_13030 PF01497 Periplasmic binding protein JAV55_13040 PF00884 Sulfatase JAV55_13045 PF00480 ROK family JAV55_13050 PF06014 Bacterial protein of unknown function (DUF910) JAV55_13055 PF03323 Bacillus/Clostridium GerA spore germination protein JAV55_13060 PF01694 Rhomboid family JAV55_13070 PF01812 5-formyltetrahydrofolate cyclo-ligase family JAV55_13075 PF00471 Ribosomal protein L33 JAV55_13080 PF13439 Glycosyltransferase Family 4 JAV55_13080 PF00534 Glycosyl transferases group 1 JAV55_13100 PF00005 ABC transporter JAV55_13105 PF00005 ABC transporter JAV55_13110 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_13115 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_13120 PF12849 PBP superfamily domain JAV55_13125 PF00905 Penicillin binding protein transpeptidase domain JAV55_13125 PF03717 Penicillin-binding Protein dimerisation domain JAV55_13130 PF07690 Major Facilitator Superfamily JAV55_13135 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JAV55_13135 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JAV55_13140 PF04306 Protein of unknown function (DUF456) JAV55_13145 PF06691 Protein of unknown function (DUF1189) JAV55_13155 PF04551 GcpE protein JAV55_13170 PF01475 Ferric uptake regulator family JAV55_13175 PF00950 ABC 3 transport family JAV55_13180 PF00005 ABC transporter JAV55_13185 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JAV55_13185 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JAV55_13190 PF11116 Protein of unknown function (DUF2624) JAV55_13195 PF01261 Xylose isomerase-like TIM barrel JAV55_13200 PF00271 Helicase conserved C-terminal domain JAV55_13200 PF00270 DEAD/DEAH box helicase JAV55_13210 PF02401 LytB protein JAV55_13215 PF01784 NIF3 (NGG1p interacting factor 3) JAV55_13220 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JAV55_13225 PF04493 Endonuclease V JAV55_13230 PF04493 Endonuclease V JAV55_13265 PF14431 YwqJ-like deaminase JAV55_13265 PF14449 Pre-toxin TG JAV55_13265 PF04740 LXG domain of WXG superfamily JAV55_13280 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JAV55_13285 PF03979 Sigma-70 factor, region 1.1 JAV55_13285 PF04539 Sigma-70 region 3 JAV55_13285 PF04545 Sigma-70, region 4 JAV55_13285 PF00140 Sigma-70 factor, region 1.2 JAV55_13285 PF04542 Sigma-70 region 2 JAV55_13290 PF10410 DnaB-helicase binding domain of primase JAV55_13290 PF08275 DNA primase catalytic core, N-terminal domain JAV55_13290 PF01807 CHC2 zinc finger JAV55_13295 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JAV55_13300 PF03618 Kinase/pyrophosphorylase JAV55_13305 PF00571 CBS domain JAV55_13305 PF08279 HTH domain JAV55_13310 PF02092 Glycyl-tRNA synthetase beta subunit JAV55_13315 PF02091 Glycyl-tRNA synthetase alpha subunit JAV55_13320 PF11967 Recombination protein O N terminal JAV55_13320 PF02565 Recombination protein O C terminal JAV55_13325 PF14006 YqzL-like protein JAV55_13330 PF07650 KH domain JAV55_13330 PF01926 50S ribosome-binding GTPase JAV55_13335 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JAV55_13340 PF01219 Prokaryotic diacylglycerol kinase JAV55_13345 PF02130 Uncharacterized protein family UPF0054 JAV55_13350 PF01966 HD domain JAV55_13350 PF07698 7TM receptor with intracellular HD hydrolase JAV55_13350 PF07697 7TM-HD extracellular JAV55_13355 PF02562 PhoH-like protein JAV55_13360 PF06898 Putative stage IV sporulation protein YqfD JAV55_13365 PF07873 YabP family JAV55_13375 PF12127 SigmaW regulon antibacterial JAV55_13380 PF01957 NfeD-like C-terminal, partner-binding JAV55_13380 PF01972 Serine dehydrogenase proteinase JAV55_13385 PF09424 Yqey-like protein JAV55_13390 PF01165 Ribosomal protein S21 JAV55_13395 PF02690 Na+/Pi-cotransporter JAV55_13400 PF01791 DeoC/LacD family aldolase JAV55_13405 PF04055 Radical SAM superfamily JAV55_13405 PF01938 TRAM domain JAV55_13405 PF00919 Uncharacterized protein family UPF0004 JAV55_13410 PF04452 RNA methyltransferase JAV55_13420 PF01556 DnaJ C terminal domain JAV55_13420 PF00684 DnaJ central domain JAV55_13420 PF00226 DnaJ domain JAV55_13425 PF00012 Hsp70 protein JAV55_13430 PF01025 GrpE JAV55_13435 PF01628 HrcA protein C terminal domain JAV55_13440 PF04055 Radical SAM superfamily JAV55_13440 PF06969 HemN C-terminal domain JAV55_13445 PF00009 Elongation factor Tu GTP binding domain JAV55_13445 PF06421 GTP-binding protein LepA C-terminus JAV55_13445 PF03144 Elongation factor Tu domain 2 JAV55_13445 PF00679 Elongation factor G C-terminus JAV55_13450 PF12438 Protein of unknown function (DUF3679) JAV55_13455 PF07454 Stage II sporulation protein P (SpoIIP) JAV55_13460 PF03418 Germination protease JAV55_13465 PF01649 Ribosomal protein S20 JAV55_13470 PF06144 DNA polymerase III, delta subunit JAV55_13475 PF14141 YqzM-like protein JAV55_13480 PF13567 Domain of unknown function (DUF4131) JAV55_13480 PF03772 Competence protein JAV55_13480 PF00753 Metallo-beta-lactamase superfamily JAV55_13485 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JAV55_13490 PF10531 SLBB domain JAV55_13495 PF14748 Pyrroline-5-carboxylate reductase dimerisation JAV55_13495 PF03807 NADP oxidoreductase coenzyme F420-dependent JAV55_13500 PF13649 Methyltransferase domain JAV55_13510 PF01966 HD domain JAV55_13515 PF01467 Cytidylyltransferase-like JAV55_13520 PF01985 CRS1 / YhbY (CRM) domain JAV55_13525 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JAV55_13525 PF08501 Shikimate dehydrogenase substrate binding domain JAV55_13525 PF01488 Shikimate / quinate 5-dehydrogenase JAV55_13530 PF01926 50S ribosome-binding GTPase JAV55_13540 PF08970 Sporulation inhibitor A JAV55_13550 PF00657 GDSL-like Lipase/Acylhydrolase JAV55_13555 PF12746 GNAT acetyltransferase JAV55_13560 PF10057 Uncharacterized conserved protein (DUF2294) JAV55_13565 PF00384 Molybdopterin oxidoreductase JAV55_13565 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JAV55_13565 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JAV55_13565 PF00037 4Fe-4S binding domain JAV55_13565 PF01568 Molydopterin dinucleotide binding domain JAV55_13570 PF07849 Protein of unknown function (DUF1641) JAV55_13580 PF04542 Sigma-70 region 2 JAV55_13580 PF04545 Sigma-70, region 4 JAV55_13590 PF00005 ABC transporter JAV55_13600 PF07454 Stage II sporulation protein P (SpoIIP) JAV55_13615 PF04542 Sigma-70 region 2 JAV55_13615 PF04545 Sigma-70, region 4 JAV55_13630 PF17094 Uncharacterised protein family (UPF0715) JAV55_13655 PF00753 Metallo-beta-lactamase superfamily JAV55_13655 PF16123 Hydroxyacylglutathione hydrolase C-terminus JAV55_13665 PF00196 Bacterial regulatory proteins, luxR family JAV55_13665 PF00072 Response regulator receiver domain JAV55_13670 PF07730 Histidine kinase JAV55_13670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_13675 PF00085 Thioredoxin JAV55_13680 PF01925 Sulfite exporter TauE/SafE JAV55_13685 PF01206 Sulfurtransferase TusA JAV55_13690 PF00753 Metallo-beta-lactamase superfamily JAV55_13690 PF00581 Rhodanese-like domain JAV55_13695 PF01206 Sulfurtransferase TusA JAV55_13695 PF00581 Rhodanese-like domain JAV55_13700 PF13686 DsrE/DsrF/DrsH-like family JAV55_13705 PF02583 Metal-sensitive transcriptional repressor JAV55_13750 PF01809 Putative membrane protein insertion efficiency factor JAV55_13755 PF00490 Delta-aminolevulinic acid dehydratase JAV55_13760 PF01380 SIS domain JAV55_13765 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JAV55_13770 PF01638 HxlR-like helix-turn-helix JAV55_13775 PF00487 Fatty acid desaturase JAV55_13780 PF07730 Histidine kinase JAV55_13785 PF00072 Response regulator receiver domain JAV55_13785 PF00196 Bacterial regulatory proteins, luxR family JAV55_13790 PF07992 Pyridine nucleotide-disulphide oxidoreductase JAV55_13795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JAV55_13800 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_13805 PF12911 N-terminal TM domain of oligopeptide transport permease C JAV55_13805 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_13810 PF00005 ABC transporter JAV55_13810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JAV55_13815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JAV55_13815 PF00005 ABC transporter JAV55_13830 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JAV55_13830 PF12833 Helix-turn-helix domain JAV55_13835 PF00106 short chain dehydrogenase JAV55_13850 PF00067 Cytochrome P450 JAV55_13855 PF01925 Sulfite exporter TauE/SafE JAV55_13865 PF00106 short chain dehydrogenase JAV55_13870 PF08244 Glycosyl hydrolases family 32 C terminal JAV55_13870 PF00251 Glycosyl hydrolases family 32 N-terminal domain JAV55_13875 PF03613 PTS system mannose/fructose/sorbose family IID component JAV55_13880 PF03609 PTS system sorbose-specific iic component JAV55_13885 PF03830 PTS system sorbose subfamily IIB component JAV55_13890 PF03610 PTS system fructose IIA component JAV55_13895 PF00158 Sigma-54 interaction domain JAV55_13895 PF03610 PTS system fructose IIA component JAV55_13895 PF00874 PRD domain JAV55_13905 PF14145 YrhK-like protein JAV55_13920 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JAV55_13920 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JAV55_13925 PF00248 Aldo/keto reductase family JAV55_13930 PF07690 Major Facilitator Superfamily JAV55_13935 PF01638 HxlR-like helix-turn-helix JAV55_13940 PF03575 Peptidase family S51 JAV55_13945 PF02602 Uroporphyrinogen-III synthase HemD JAV55_13955 PF01497 Periplasmic binding protein JAV55_13960 PF03466 LysR substrate binding domain JAV55_13960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JAV55_13965 PF07690 Major Facilitator Superfamily JAV55_13975 PF00258 Flavodoxin JAV55_13975 PF00067 Cytochrome P450 JAV55_13975 PF00175 Oxidoreductase NAD-binding domain JAV55_13975 PF00667 FAD binding domain JAV55_13980 PF00440 Bacterial regulatory proteins, tetR family JAV55_13980 PF16295 Tetracyclin repressor-like, C-terminal domain JAV55_13985 PF17936 Bacterial Ig domain JAV55_13985 PF00082 Subtilase family JAV55_13990 PF08241 Methyltransferase domain JAV55_14005 PF09501 Probable sporulation protein (Bac_small_yrzI) JAV55_14010 PF14143 YrhC-like protein JAV55_14015 PF01053 Cys/Met metabolism PLP-dependent enzyme JAV55_14020 PF00291 Pyridoxal-phosphate dependent enzyme JAV55_14025 PF01048 Phosphorylase superfamily JAV55_14030 PF13649 Methyltransferase domain JAV55_14035 PF10750 Protein of unknown function (DUF2536) JAV55_14040 PF07423 Domain of unknown function (DUF1510) JAV55_14045 PF00905 Penicillin binding protein transpeptidase domain JAV55_14045 PF03717 Penicillin-binding Protein dimerisation domain JAV55_14050 PF01272 Transcription elongation factor, GreA/GreB, C-term JAV55_14050 PF03449 Transcription elongation factor, N-terminal JAV55_14055 PF00485 Phosphoribulokinase / Uridine kinase family JAV55_14060 PF16325 Peptidase family U32 C-terminal domain JAV55_14060 PF01136 Peptidase family U32 JAV55_14065 PF01136 Peptidase family U32 JAV55_14070 PF01596 O-methyltransferase JAV55_14075 PF02618 YceG-like family JAV55_14080 PF06949 Protein of unknown function (DUF1292) JAV55_14085 PF03652 Holliday junction resolvase JAV55_14090 PF06135 IreB regulatory phosphoprotein JAV55_14095 PF01411 tRNA synthetases class II (A) JAV55_14095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JAV55_14095 PF02272 DHHA1 domain JAV55_14100 PF01594 AI-2E family transporter JAV55_14105 PF13056 Protein of unknown function (DUF3918) JAV55_14115 PF05239 PRC-barrel domain JAV55_14120 PF13538 UvrD-like helicase C-terminal domain JAV55_14120 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JAV55_14120 PF14490 Helix-hairpin-helix containing domain JAV55_14125 PF13181 Tetratricopeptide repeat JAV55_14125 PF07719 Tetratricopeptide repeat JAV55_14135 PF00266 Aminotransferase class-V JAV55_14140 PF02082 Transcriptional regulator JAV55_14145 PF16193 AAA C-terminal domain JAV55_14145 PF12002 MgsA AAA+ ATPase C terminal JAV55_14145 PF05496 Holliday junction DNA helicase RuvB P-loop domain JAV55_14150 PF00899 ThiF family JAV55_14160 PF00152 tRNA synthetases class II (D, K and N) JAV55_14160 PF01336 OB-fold nucleic acid binding domain JAV55_14160 PF02938 GAD domain JAV55_14165 PF13393 Histidyl-tRNA synthetase JAV55_14165 PF03129 Anticodon binding domain JAV55_14175 PF01520 N-acetylmuramoyl-L-alanine amidase JAV55_14175 PF08239 Bacterial SH3 domain JAV55_14180 PF02580 D-Tyr-tRNA(Tyr) deacylase JAV55_14185 PF04607 Region found in RelA / SpoT proteins JAV55_14185 PF02824 TGS domain JAV55_14185 PF13291 ACT domain JAV55_14190 PF00156 Phosphoribosyl transferase domain JAV55_14195 PF02272 DHHA1 domain JAV55_14195 PF17768 RecJ OB domain JAV55_14195 PF01368 DHH family JAV55_14195 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JAV55_14200 PF06305 Lipopolysaccharide assembly protein A domain JAV55_14205 PF07549 SecD/SecF GG Motif JAV55_14205 PF02355 Protein export membrane protein JAV55_14210 PF13797 Post-transcriptional regulator JAV55_14215 PF14667 Polysaccharide biosynthesis C-terminal domain JAV55_14215 PF01943 Polysaccharide biosynthesis protein JAV55_14220 PF04239 Protein of unknown function (DUF421) JAV55_14225 PF12670 Protein of unknown function (DUF3792) JAV55_14230 PF02699 Preprotein translocase subunit JAV55_14235 PF01702 Queuine tRNA-ribosyltransferase JAV55_14240 PF02547 Queuosine biosynthesis protein JAV55_14245 PF11146 Protein of unknown function (DUF2905) JAV55_14250 PF05496 Holliday junction DNA helicase RuvB P-loop domain JAV55_14250 PF05491 RuvB C-terminal winged helix domain JAV55_14250 PF17864 RuvB AAA lid domain JAV55_14255 PF01330 RuvA N terminal domain JAV55_14255 PF07499 RuvA, C-terminal domain JAV55_14260 PF08955 BofC C-terminal domain JAV55_14260 PF08977 Bypass of Forespore C, N terminal JAV55_14270 PF08141 Small acid-soluble spore protein H family JAV55_14275 PF05163 DinB family JAV55_14280 PF05908 Poly-gamma-glutamate hydrolase JAV55_14295 PF01709 Transcriptional regulator JAV55_14300 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JAV55_14305 PF01476 LysM domain JAV55_14310 PF02445 Quinolinate synthetase A protein JAV55_14315 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JAV55_14315 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JAV55_14320 PF02910 Fumarate reductase flavoprotein C-term JAV55_14320 PF00890 FAD binding domain JAV55_14325 PF00266 Aminotransferase class-V JAV55_14330 PF02829 3H domain JAV55_14330 PF08279 HTH domain JAV55_14335 PF00800 Prephenate dehydratase JAV55_14335 PF01842 ACT domain JAV55_14340 PF01842 ACT domain JAV55_14345 PF01018 GTP1/OBG JAV55_14345 PF01926 50S ribosome-binding GTPase JAV55_14345 PF09269 Domain of unknown function (DUF1967) JAV55_14350 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JAV55_14350 PF14682 Sporulation initiation phospho-transferase B, C-terminal JAV55_14355 PF01016 Ribosomal L27 protein JAV55_14360 PF04327 Cysteine protease Prp JAV55_14365 PF00829 Ribosomal prokaryotic L21 protein JAV55_14370 PF02163 Peptidase family M50 JAV55_14375 PF01551 Peptidase family M23 JAV55_14380 PF08327 Activator of Hsp90 ATPase homolog 1-like protein JAV55_14385 PF01022 Bacterial regulatory protein, arsR family JAV55_14390 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JAV55_14395 PF03775 Septum formation inhibitor MinC, C-terminal domain JAV55_14400 PF04093 rod shape-determining protein MreD JAV55_14405 PF04085 rod shape-determining protein MreC JAV55_14415 PF04002 RadC-like JAB domain JAV55_14420 PF02545 Maf-like protein JAV55_14425 PF05036 Sporulation related domain JAV55_14430 PF06750 Bacterial Peptidase A24 N-terminal domain JAV55_14430 PF01478 Type IV leader peptidase family JAV55_14435 PF02875 Mur ligase family, glutamate ligase domain JAV55_14435 PF08245 Mur ligase middle domain JAV55_14440 PF08264 Anticodon-binding domain of tRNA JAV55_14440 PF00133 tRNA synthetases class I (I, L, M and V) JAV55_14440 PF10458 Valyl tRNA synthetase tRNA binding arm JAV55_14455 PF01476 LysM domain JAV55_14460 PF00202 Aminotransferase class-III JAV55_14465 PF00490 Delta-aminolevulinic acid dehydratase JAV55_14470 PF02602 Uroporphyrinogen-III synthase HemD JAV55_14475 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JAV55_14475 PF03900 Porphobilinogen deaminase, C-terminal domain JAV55_14480 PF01578 Cytochrome C assembly protein JAV55_14485 PF01488 Shikimate / quinate 5-dehydrogenase JAV55_14485 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JAV55_14485 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JAV55_14495 PF01926 50S ribosome-binding GTPase JAV55_14500 PF05362 Lon protease (S16) C-terminal proteolytic domain JAV55_14500 PF00004 ATPase family associated with various cellular activities (AAA) JAV55_14500 PF02190 ATP-dependent protease La (LON) substrate-binding domain JAV55_14505 PF05362 Lon protease (S16) C-terminal proteolytic domain JAV55_14505 PF00004 ATPase family associated with various cellular activities (AAA) JAV55_14510 PF06689 ClpX C4-type zinc finger JAV55_14510 PF10431 C-terminal, D2-small domain, of ClpB protein JAV55_14510 PF07724 AAA domain (Cdc48 subfamily) JAV55_14515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JAV55_14515 PF05698 Bacterial trigger factor protein (TF) C-terminus JAV55_14515 PF05697 Bacterial trigger factor protein (TF) JAV55_14525 PF00694 Aconitase C-terminal domain JAV55_14530 PF00330 Aconitase family (aconitate hydratase) JAV55_14535 PF00180 Isocitrate/isopropylmalate dehydrogenase JAV55_14540 PF00682 HMGL-like JAV55_14540 PF08502 LeuA allosteric (dimerisation) domain JAV55_14545 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JAV55_14545 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JAV55_14550 PF01842 ACT domain JAV55_14550 PF10369 Small subunit of acetolactate synthase JAV55_14555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JAV55_14555 PF00205 Thiamine pyrophosphate enzyme, central domain JAV55_14555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JAV55_14560 PF01063 Amino-transferase class IV JAV55_14570 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JAV55_14570 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JAV55_14620 PF04634 Protein of unknown function, DUF600 JAV55_14625 PF04740 LXG domain of WXG superfamily JAV55_14630 PF18801 response regulator aspartate phosphatase H, N terminal JAV55_14655 PF12850 Calcineurin-like phosphoesterase superfamily domain JAV55_14660 PF01725 Ham1 family JAV55_14665 PF03725 3' exoribonuclease family, domain 2 JAV55_14665 PF01138 3' exoribonuclease family, domain 1 JAV55_14670 PF10646 Sporulation and spore germination JAV55_14675 PF01177 Asp/Glu/Hydantoin racemase JAV55_14680 PF01047 MarR family JAV55_14685 PF00196 Bacterial regulatory proteins, luxR family JAV55_14690 PF00106 short chain dehydrogenase JAV55_14695 PF03061 Thioesterase superfamily JAV55_14700 PF13085 2Fe-2S iron-sulfur cluster binding domain JAV55_14700 PF13183 4Fe-4S dicluster domain JAV55_14705 PF02910 Fumarate reductase flavoprotein C-term JAV55_14705 PF00890 FAD binding domain JAV55_14710 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JAV55_14715 PF10702 Protein of unknown function (DUF2507) JAV55_14720 PF00696 Amino acid kinase family JAV55_14720 PF01842 ACT domain JAV55_14720 PF13840 ACT domain JAV55_14725 PF08459 UvrC Helix-hairpin-helix N-terminal JAV55_14725 PF02151 UvrB/uvrC motif JAV55_14725 PF01541 GIY-YIG catalytic domain JAV55_14730 PF00085 Thioredoxin JAV55_14735 PF00766 Electron transfer flavoprotein FAD-binding domain JAV55_14735 PF01012 Electron transfer flavoprotein domain JAV55_14740 PF01012 Electron transfer flavoprotein domain JAV55_14745 PF00378 Enoyl-CoA hydratase/isomerase JAV55_14750 PF08359 YsiA-like protein, C-terminal region JAV55_14750 PF00440 Bacterial regulatory proteins, tetR family JAV55_14755 PF00501 AMP-binding enzyme JAV55_14755 PF13193 AMP-binding enzyme C-terminal domain JAV55_14760 PF03994 Domain of Unknown Function (DUF350) JAV55_14765 PF01713 Smr domain JAV55_14765 PF00488 MutS domain V JAV55_14770 PF14716 Helix-hairpin-helix domain JAV55_14770 PF02811 PHP domain JAV55_14770 PF14791 DNA polymerase beta thumb JAV55_14775 PF02674 Colicin V production protein JAV55_14780 PF05164 Cell division protein ZapA JAV55_14785 PF11858 Domain of unknown function (DUF3378) JAV55_14785 PF01351 Ribonuclease HII JAV55_14805 PF00005 ABC transporter JAV55_14805 PF12399 Branched-chain amino acid ATP-binding cassette transporter JAV55_14820 PF03147 Ferredoxin-fold anticodon binding domain JAV55_14820 PF03484 tRNA synthetase B5 domain JAV55_14820 PF01588 Putative tRNA binding domain JAV55_14820 PF03483 B3/4 domain JAV55_14820 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JAV55_14825 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JAV55_14825 PF01409 tRNA synthetases class II core domain (F) JAV55_14830 PF08032 RNA 2'-O ribose methyltransferase substrate binding JAV55_14830 PF00588 SpoU rRNA Methylase family JAV55_14835 PF14098 Small, acid-soluble spore protein I JAV55_14840 PF02554 Carbon starvation protein CstA JAV55_14840 PF13722 5TM C-terminal transporter carbon starvation CstA JAV55_14845 PF06964 Alpha-L-arabinofuranosidase C-terminal domain JAV55_14850 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_14855 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_14860 PF01547 Bacterial extracellular solute-binding protein JAV55_14865 PF13685 Iron-containing alcohol dehydrogenase JAV55_14870 PF00596 Class II Aldolase and Adducin N-terminal domain JAV55_14875 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JAV55_14875 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JAV55_14880 PF11762 L-arabinose isomerase C-terminal domain JAV55_14880 PF02610 L-arabinose isomerase JAV55_14885 PF04616 Glycosyl hydrolases family 43 JAV55_14890 PF05343 M42 glutamyl aminopeptidase JAV55_14900 PF06961 Protein of unknown function (DUF1294) JAV55_14905 PF00453 Ribosomal protein L20 JAV55_14910 PF01632 Ribosomal protein L35 JAV55_14915 PF05198 Translation initiation factor IF-3, N-terminal domain JAV55_14915 PF00707 Translation initiation factor IF-3, C-terminal domain JAV55_14920 PF04172 LrgB-like family JAV55_14925 PF03788 LrgA family JAV55_14930 PF09423 PhoD-like phosphatase JAV55_14930 PF16655 PhoD-like phosphatase, N-terminal domain JAV55_14935 PF04397 LytTr DNA-binding domain JAV55_14935 PF00072 Response regulator receiver domain JAV55_14940 PF06580 Histidine kinase JAV55_14940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_14940 PF07694 5TMR of 5TMR-LYT JAV55_14950 PF13419 Haloacid dehalogenase-like hydrolase JAV55_14955 PF02824 TGS domain JAV55_14955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JAV55_14955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JAV55_14955 PF03129 Anticodon binding domain JAV55_14960 PF08812 YtxC-like family JAV55_14965 PF09335 SNARE associated Golgi protein JAV55_14970 PF01695 IstB-like ATP binding protein JAV55_14970 PF07319 Primosomal protein DnaI N-terminus JAV55_14975 PF07261 Replication initiation and membrane attachment JAV55_14980 PF03477 ATP cone domain JAV55_14990 PF02675 S-adenosylmethionine decarboxylase JAV55_14995 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JAV55_14995 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JAV55_15000 PF00544 Pectate lyase JAV55_15005 PF01121 Dephospho-CoA kinase JAV55_15010 PF02659 Putative manganese efflux pump JAV55_15015 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JAV55_15015 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JAV55_15015 PF06827 Zinc finger found in FPG and IleRS JAV55_15020 PF01367 5'-3' exonuclease, C-terminal SAM fold JAV55_15020 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JAV55_15020 PF00476 DNA polymerase family A JAV55_15025 PF16736 Single Cache-like JAV55_15025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_15025 PF00512 His Kinase A (phospho-acceptor) domain JAV55_15025 PF00989 PAS fold JAV55_15030 PF00072 Response regulator receiver domain JAV55_15030 PF00486 Transcriptional regulatory protein, C terminal JAV55_15035 PF00056 lactate/malate dehydrogenase, NAD binding domain JAV55_15035 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JAV55_15040 PF00180 Isocitrate/isopropylmalate dehydrogenase JAV55_15045 PF00285 Citrate synthase, C-terminal domain JAV55_15050 PF04284 Protein of unknown function (DUF441) JAV55_15055 PF01594 AI-2E family transporter JAV55_15060 PF04186 FxsA cytoplasmic membrane protein JAV55_15065 PF00391 PEP-utilising enzyme, mobile domain JAV55_15065 PF02887 Pyruvate kinase, alpha/beta domain JAV55_15065 PF00224 Pyruvate kinase, barrel domain JAV55_15070 PF00365 Phosphofructokinase JAV55_15075 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JAV55_15080 PF17848 Acetyl-coA carboxylase zinc finger domain JAV55_15080 PF01039 Carboxyl transferase domain JAV55_15085 PF03949 Malic enzyme, NAD binding domain JAV55_15085 PF00390 Malic enzyme, N-terminal domain JAV55_15090 PF07733 Bacterial DNA polymerase III alpha NTPase domain JAV55_15090 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JAV55_15090 PF01336 OB-fold nucleic acid binding domain JAV55_15090 PF14579 Helix-hairpin-helix motif JAV55_15090 PF02811 PHP domain JAV55_15095 PF14034 Sporulation protein YtrH JAV55_15110 PF01368 DHH family JAV55_15110 PF02272 DHHA1 domain JAV55_15115 PF14007 YtpI-like protein JAV55_15120 PF07085 DRTGG domain JAV55_15120 PF03061 Thioesterase superfamily JAV55_15120 PF00571 CBS domain JAV55_15120 PF00392 Bacterial regulatory proteins, gntR family JAV55_15125 PF03551 Transcriptional regulator PadR-like family JAV55_15125 PF10400 Virulence activator alpha C-term JAV55_15145 PF14698 Argininosuccinate lyase C-terminal JAV55_15145 PF00206 Lyase JAV55_15150 PF00764 Arginosuccinate synthase JAV55_15155 PF00994 Probable molybdopterin binding domain JAV55_15160 PF00871 Acetokinase family JAV55_15165 PF02384 N-6 DNA Methylase JAV55_15170 PF08534 Redoxin JAV55_15175 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JAV55_15180 PF11167 Protein of unknown function (DUF2953) JAV55_15185 PF06271 RDD family JAV55_15190 PF01343 Peptidase family S49 JAV55_15195 PF01513 ATP-NAD kinase JAV55_15205 PF07690 Major Facilitator Superfamily JAV55_15215 PF00501 AMP-binding enzyme JAV55_15215 PF13193 AMP-binding enzyme C-terminal domain JAV55_15220 PF00269 Small, acid-soluble spore proteins, alpha/beta type JAV55_15225 PF02568 Thiamine biosynthesis protein (ThiI) JAV55_15225 PF02926 THUMP domain JAV55_15230 PF00266 Aminotransferase class-V JAV55_15235 PF05525 Branched-chain amino acid transport protein JAV55_15240 PF06160 Septation ring formation regulator, EzrA JAV55_15245 PF02811 PHP domain JAV55_15250 PF00440 Bacterial regulatory proteins, tetR family JAV55_15255 PF13185 GAF domain JAV55_15260 PF00990 Diguanylate cyclase, GGDEF domain JAV55_15265 PF00163 Ribosomal protein S4/S9 N-terminal domain JAV55_15265 PF01479 S4 domain JAV55_15275 PF05656 Protein of unknown function (DUF805) JAV55_15280 PF12706 Beta-lactamase superfamily domain JAV55_15285 PF01037 Lrp/AsnC ligand binding domain JAV55_15295 PF01479 S4 domain JAV55_15295 PF00579 tRNA synthetases class I (W and Y) JAV55_15300 PF00501 AMP-binding enzyme JAV55_15300 PF13193 AMP-binding enzyme C-terminal domain JAV55_15305 PF00583 Acetyltransferase (GNAT) family JAV55_15310 PF00571 CBS domain JAV55_15315 PF00850 Histone deacetylase domain JAV55_15320 PF13677 Membrane MotB of proton-channel complex MotA/MotB JAV55_15320 PF00691 OmpA family JAV55_15325 PF01618 MotA/TolQ/ExbB proton channel family JAV55_15330 PF00356 Bacterial regulatory proteins, lacI family JAV55_15335 PF01817 Chorismate mutase type II JAV55_15335 PF00793 DAHP synthetase I family JAV55_15345 PF11009 Protein of unknown function (DUF2847) JAV55_15350 PF12732 YtxH-like protein JAV55_15355 PF06103 Bacterial protein of unknown function (DUF948) JAV55_15360 PF01225 Mur ligase family, catalytic domain JAV55_15360 PF08245 Mur ligase middle domain JAV55_15360 PF02875 Mur ligase family, glutamate ligase domain JAV55_15365 PF09397 Ftsk gamma domain JAV55_15365 PF01580 FtsK/SpoIIIE family JAV55_15365 PF17854 FtsK alpha domain JAV55_15370 PF14794 Domain of unknown function (DUF4479) JAV55_15370 PF01588 Putative tRNA binding domain JAV55_15375 PF07285 Protein of unknown function (DUF1444) JAV55_15380 PF00085 Thioredoxin JAV55_15385 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ JAV55_15390 PF05343 M42 glutamyl aminopeptidase JAV55_15395 PF03413 Peptidase propeptide and YPEB domain JAV55_15400 PF00390 Malic enzyme, N-terminal domain JAV55_15400 PF03949 Malic enzyme, NAD binding domain JAV55_15405 PF00753 Metallo-beta-lactamase superfamily JAV55_15410 PF02390 Putative methyltransferase JAV55_15415 PF14165 YtzH-like protein JAV55_15420 PF01636 Phosphotransferase enzyme family JAV55_15425 PF00128 Alpha amylase, catalytic domain JAV55_15425 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JAV55_15425 PF17999 Pullulanase N1-terminal domain JAV55_15430 PF00781 Diacylglycerol kinase catalytic domain JAV55_15445 PF00291 Pyridoxal-phosphate dependent enzyme JAV55_15460 PF01546 Peptidase family M20/M25/M40 JAV55_15465 PF00860 Permease family JAV55_15470 PF08220 DeoR-like helix-turn-helix domain JAV55_15475 PF00849 RNA pseudouridylate synthase JAV55_15475 PF01479 S4 domain JAV55_15480 PF01943 Polysaccharide biosynthesis protein JAV55_15480 PF14667 Polysaccharide biosynthesis C-terminal domain JAV55_15490 PF02028 BCCT, betaine/carnitine/choline family transporter JAV55_15495 PF10957 Sporulation protein Cse60 JAV55_15500 PF00581 Rhodanese-like domain JAV55_15515 PF04854 Protein of unknown function, DUF624 JAV55_15520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JAV55_15520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JAV55_15530 PF07470 Glycosyl Hydrolase Family 88 JAV55_15535 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_15540 PF12833 Helix-turn-helix domain JAV55_15540 PF17853 GGDEF-like domain JAV55_15545 PF13416 Bacterial extracellular solute-binding protein JAV55_15550 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_15555 PF01370 NAD dependent epimerase/dehydratase family JAV55_15560 PF01738 Dienelactone hydrolase family JAV55_15570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JAV55_15570 PF03466 LysR substrate binding domain JAV55_15575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JAV55_15580 PF08264 Anticodon-binding domain of tRNA JAV55_15580 PF00133 tRNA synthetases class I (I, L, M and V) JAV55_15580 PF09334 tRNA synthetases class I (M) JAV55_15580 PF13603 Leucyl-tRNA synthetase, Domain 2 JAV55_15585 PF14074 Protein of unknown function (DUF4257) JAV55_15590 PF07690 Major Facilitator Superfamily JAV55_15595 PF03180 NLPA lipoprotein JAV55_15600 PF04791 LMBR1-like membrane protein JAV55_15605 PF12704 MacB-like periplasmic core domain JAV55_15605 PF02687 FtsX-like permease family JAV55_15610 PF00005 ABC transporter JAV55_15620 PF00005 ABC transporter JAV55_15625 PF00392 Bacterial regulatory proteins, gntR family JAV55_15630 PF10732 Protein of unknown function (DUF2524) JAV55_15635 PF16199 Radical_SAM C-terminal domain JAV55_15635 PF04055 Radical SAM superfamily JAV55_15640 PF06962 Putative rRNA methylase JAV55_15645 PF00375 Sodium:dicarboxylate symporter family JAV55_15650 PF10776 Protein of unknown function (DUF2600) JAV55_15655 PF12146 Serine aminopeptidase, S33 JAV55_15660 PF00132 Bacterial transferase hexapeptide (six repeats) JAV55_15665 PF01569 PAP2 superfamily JAV55_15670 PF13439 Glycosyltransferase Family 4 JAV55_15670 PF00534 Glycosyl transferases group 1 JAV55_15675 PF00733 Asparagine synthase JAV55_15675 PF13537 Glutamine amidotransferase domain JAV55_15680 PF00438 S-adenosylmethionine synthetase, N-terminal domain JAV55_15680 PF02773 S-adenosylmethionine synthetase, C-terminal domain JAV55_15680 PF02772 S-adenosylmethionine synthetase, central domain JAV55_15685 PF01293 Phosphoenolpyruvate carboxykinase JAV55_15695 PF10763 Protein of unknown function (DUF2584) JAV55_15700 PF00326 Prolyl oligopeptidase family JAV55_15710 PF00005 ABC transporter JAV55_15715 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_15720 PF00293 NUDIX domain JAV55_15730 PF05105 Bacteriophage holin family JAV55_15735 PF00210 Ferritin-like domain JAV55_15745 PF13115 YtkA-like JAV55_15750 PF02664 S-Ribosylhomocysteinase (LuxS) JAV55_15755 PF01809 Putative membrane protein insertion efficiency factor JAV55_15760 PF00484 Carbonic anhydrase JAV55_15765 PF02492 CobW/HypB/UreG, nucleotide-binding domain JAV55_15765 PF07683 Cobalamin synthesis protein cobW C-terminal domain JAV55_15770 PF01297 Zinc-uptake complex component A periplasmic JAV55_15775 PF01197 Ribosomal protein L31 JAV55_15780 PF01654 Cytochrome bd terminal oxidase subunit I JAV55_15785 PF02322 Cytochrome bd terminal oxidase subunit II JAV55_15790 PF07561 Domain of Unknown Function (DUF1540) JAV55_15800 PF13378 Enolase C-terminal domain-like JAV55_15800 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JAV55_15805 PF13193 AMP-binding enzyme C-terminal domain JAV55_15805 PF00501 AMP-binding enzyme JAV55_15810 PF00378 Enoyl-CoA hydratase/isomerase JAV55_15815 PF00561 alpha/beta hydrolase fold JAV55_15820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JAV55_15820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JAV55_15820 PF16582 Middle domain of thiamine pyrophosphate JAV55_15825 PF00425 chorismate binding enzyme JAV55_15830 PF01040 UbiA prenyltransferase family JAV55_15835 PF01258 Prokaryotic dksA/traR C4-type zinc finger JAV55_15840 PF00343 Carbohydrate phosphorylase JAV55_15845 PF00534 Glycosyl transferases group 1 JAV55_15845 PF08323 Starch synthase catalytic domain JAV55_15850 PF00483 Nucleotidyl transferase JAV55_15855 PF00483 Nucleotidyl transferase JAV55_15985 PF00392 Bacterial regulatory proteins, gntR family JAV55_15990 PF09515 Thiamine transporter protein (Thia_YuaJ) JAV55_15995 PF04203 Sortase domain JAV55_16010 PF18801 response regulator aspartate phosphatase H, N terminal JAV55_16015 PF01470 Pyroglutamyl peptidase JAV55_16020 PF02080 TrkA-C domain JAV55_16020 PF02254 TrkA-N domain JAV55_16025 PF02386 Cation transport protein JAV55_16035 PF12867 DinB superfamily JAV55_16045 PF00465 Iron-containing alcohol dehydrogenase JAV55_16050 PF00171 Aldehyde dehydrogenase family JAV55_16065 PF04072 Leucine carboxyl methyltransferase JAV55_16070 PF00842 Alanine racemase, C-terminal domain JAV55_16070 PF01168 Alanine racemase, N-terminal domain JAV55_16075 PF00190 Cupin JAV55_16095 PF01510 N-acetylmuramoyl-L-alanine amidase JAV55_16095 PF01471 Putative peptidoglycan binding domain JAV55_16110 PF03747 ADP-ribosylglycohydrolase JAV55_16145 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) JAV55_16160 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JAV55_16170 PF00149 Calcineurin-like phosphoesterase JAV55_16175 PF02673 Bacitracin resistance protein BacA JAV55_16180 PF01594 AI-2E family transporter JAV55_16185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JAV55_16185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JAV55_16190 PF01965 DJ-1/PfpI family JAV55_16195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JAV55_16195 PF02743 Cache domain JAV55_16195 PF00672 HAMP domain JAV55_16200 PF02743 Cache domain JAV55_16200 PF00672 HAMP domain JAV55_16200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JAV55_16205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JAV55_16205 PF00672 HAMP domain JAV55_16205 PF02743 Cache domain JAV55_16215 PF03060 Nitronate monooxygenase JAV55_16220 PF01894 Uncharacterised protein family UPF0047 JAV55_16225 PF16657 Maltogenic Amylase, C-terminal domain JAV55_16225 PF00128 Alpha amylase, catalytic domain JAV55_16240 PF01670 Glycosyl hydrolase family 12 JAV55_16245 PF00571 CBS domain JAV55_16245 PF03471 Transporter associated domain JAV55_16245 PF01595 Cyclin M transmembrane N-terminal domain JAV55_16250 PF04298 Putative neutral zinc metallopeptidase JAV55_16260 PF11458 Membrane-integrating protein Mistic JAV55_16265 PF02254 TrkA-N domain JAV55_16265 PF07885 Ion channel JAV55_16270 PF08868 YugN-like family JAV55_16280 PF03073 TspO/MBR family JAV55_16285 PF13302 Acetyltransferase (GNAT) domain JAV55_16290 PF00342 Phosphoglucose isomerase JAV55_16295 PF00465 Iron-containing alcohol dehydrogenase JAV55_16300 PF04070 Domain of unknown function (DUF378) JAV55_16305 PF00575 S1 RNA binding domain JAV55_16310 PF00155 Aminotransferase class I and II JAV55_16315 PF01037 Lrp/AsnC ligand binding domain JAV55_16320 PF08386 TAP-like protein JAV55_16320 PF00561 alpha/beta hydrolase fold JAV55_16325 PF08958 Domain of unknown function (DUF1871) JAV55_16335 PF00155 Aminotransferase class I and II JAV55_16345 PF08810 Kinase associated protein B JAV55_16350 PF00929 Exonuclease JAV55_16355 PF07690 Major Facilitator Superfamily JAV55_16360 PF00912 Transglycosylase JAV55_16360 PF00905 Penicillin binding protein transpeptidase domain JAV55_16365 PF04134 Protein of unknown function, DUF393 JAV55_16370 PF17328 Family of unknown function (DUF5366) JAV55_16375 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JAV55_16375 PF17203 Single cache domain 3 JAV55_16375 PF00989 PAS fold JAV55_16375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_16380 PF00072 Response regulator receiver domain JAV55_16390 PF01066 CDP-alcohol phosphatidyltransferase JAV55_16395 PF09335 SNARE associated Golgi protein JAV55_16400 PF02666 Phosphatidylserine decarboxylase JAV55_16405 PF03390 2-hydroxycarboxylate transporter family JAV55_16415 PF13244 Domain of unknown function (DUF4040) JAV55_16415 PF00361 Proton-conducting membrane transporter JAV55_16415 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JAV55_16420 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JAV55_16425 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JAV55_16430 PF00361 Proton-conducting membrane transporter JAV55_16435 PF01899 Na+/H+ ion antiporter subunit JAV55_16440 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JAV55_16445 PF03334 Na+/H+ antiporter subunit JAV55_16450 PF03061 Thioesterase superfamily JAV55_16455 PF00196 Bacterial regulatory proteins, luxR family JAV55_16455 PF00072 Response regulator receiver domain JAV55_16460 PF07730 Histidine kinase JAV55_16460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_16470 PF00348 Polyprenyl synthetase JAV55_16475 PF08181 DegQ (SacQ) family JAV55_16485 PF08668 HDOD domain JAV55_16485 PF00563 EAL domain JAV55_16490 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JAV55_16490 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JAV55_16490 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JAV55_16495 PF00857 Isochorismatase family JAV55_16500 PF07997 Protein of unknown function (DUF1694) JAV55_16505 PF14166 YueH-like protein JAV55_16515 PF01594 AI-2E family transporter JAV55_16520 PF02082 Transcriptional regulator JAV55_16525 PF07859 alpha/beta hydrolase fold JAV55_16535 PF01966 HD domain JAV55_16540 PF00106 short chain dehydrogenase JAV55_16545 PF17355 Family of unknown function (DUF5383) JAV55_16555 PF12538 DNA transporter JAV55_16555 PF01580 FtsK/SpoIIIE family JAV55_16560 PF10140 WXG100 protein secretion system (Wss), protein YukC JAV55_16565 PF08817 WXG100 protein secretion system (Wss), protein YukD JAV55_16570 PF06013 Proteins of 100 residues with WXG JAV55_16575 PF01235 Sodium:alanine symporter family JAV55_16580 PF06018 CodY GAF-like domain JAV55_16580 PF17853 GGDEF-like domain JAV55_16580 PF13556 PucR C-terminal helix-turn-helix domain JAV55_16585 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JAV55_16585 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JAV55_16595 PF00174 Oxidoreductase molybdopterin binding domain JAV55_16600 PF02632 BioY family JAV55_16605 PF03553 Na+/H+ antiporter family JAV55_16605 PF13726 Na+-H+ antiporter family JAV55_16610 PF00883 Cytosol aminopeptidase family, catalytic domain JAV55_16610 PF02789 Cytosol aminopeptidase family, N-terminal domain JAV55_16615 PF02681 Divergent PAP2 family JAV55_16620 PF06725 3D domain JAV55_16625 PF14068 Putative membrane protein JAV55_16630 PF17302 Family of unknown function (DUF5351) JAV55_16635 PF07992 Pyridine nucleotide-disulphide oxidoreductase JAV55_16640 PF07992 Pyridine nucleotide-disulphide oxidoreductase JAV55_16650 PF14169 Cold-inducible protein YdjO JAV55_16655 PF00583 Acetyltransferase (GNAT) family JAV55_16660 PF01521 Iron-sulphur cluster biosynthesis JAV55_16665 PF01678 Diaminopimelate epimerase JAV55_16670 PF01773 Na+ dependent nucleoside transporter N-terminus JAV55_16670 PF07662 Na+ dependent nucleoside transporter C-terminus JAV55_16675 PF07293 Protein of unknown function (DUF1450) JAV55_16680 PF07992 Pyridine nucleotide-disulphide oxidoreductase JAV55_16685 PF08818 Domain of unknown function (DU1801) JAV55_16695 PF18801 response regulator aspartate phosphatase H, N terminal JAV55_16700 PF05870 Phenolic acid decarboxylase (PAD) JAV55_16710 PF07315 Protein of unknown function (DUF1462) JAV55_16715 PF01106 NifU-like domain JAV55_16720 PF07676 WD40-like Beta Propeller Repeat JAV55_16720 PF00326 Prolyl oligopeptidase family JAV55_16725 PF08544 GHMP kinases C terminal JAV55_16725 PF00288 GHMP kinases N terminal domain JAV55_16730 PF00291 Pyridoxal-phosphate dependent enzyme JAV55_16735 PF01842 ACT domain JAV55_16735 PF00742 Homoserine dehydrogenase JAV55_16735 PF03447 Homoserine dehydrogenase, NAD binding domain JAV55_16740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JAV55_16740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JAV55_16750 PF04608 Phosphatidylglycerophosphatase A JAV55_16755 PF13344 Haloacid dehalogenase-like hydrolase JAV55_16760 PF01934 Protein of unknown function DUF86 JAV55_16765 PF06265 Protein of unknown function (DUF1027) JAV55_16770 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JAV55_16775 PF04055 Radical SAM superfamily JAV55_16775 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JAV55_16780 PF01551 Peptidase family M23 JAV55_16790 PF00209 Sodium:neurotransmitter symporter family JAV55_16795 PF09560 Sporulation protein YunB (Spo_YunB) JAV55_16800 PF08827 Domain of unknown function (DUF1805) JAV55_16805 PF02872 5'-nucleotidase, C-terminal domain JAV55_16810 PF01925 Sulfite exporter TauE/SafE JAV55_16815 PF01904 Protein of unknown function DUF72 JAV55_16825 PF00440 Bacterial regulatory proteins, tetR family JAV55_16825 PF13977 BetI-type transcriptional repressor, C-terminal JAV55_16835 PF00266 Aminotransferase class-V JAV55_16840 PF01546 Peptidase family M20/M25/M40 JAV55_16845 PF13556 PucR C-terminal helix-turn-helix domain JAV55_16845 PF07905 Purine catabolism regulatory protein-like family JAV55_16845 PF17853 GGDEF-like domain JAV55_16850 PF07690 Major Facilitator Superfamily JAV55_16855 PF03606 C4-dicarboxylate anaerobic carrier JAV55_16860 PF00591 Glycosyl transferase family, a/b domain JAV55_16860 PF02885 Glycosyl transferase family, helical bundle domain JAV55_16865 PF02885 Glycosyl transferase family, helical bundle domain JAV55_16865 PF00591 Glycosyl transferase family, a/b domain JAV55_16870 PF04231 Endonuclease I JAV55_16880 PF01266 FAD dependent oxidoreductase JAV55_16895 PF18801 response regulator aspartate phosphatase H, N terminal JAV55_16900 PF01458 Uncharacterized protein family (UPF0051) JAV55_16905 PF01592 NifU-like N terminal domain JAV55_16910 PF00266 Aminotransferase class-V JAV55_16915 PF01458 Uncharacterized protein family (UPF0051) JAV55_16920 PF00005 ABC transporter JAV55_16925 PF16916 Dimerisation domain of Zinc Transporter JAV55_16925 PF01545 Cation efflux family JAV55_16930 PF02627 Carboxymuconolactone decarboxylase family JAV55_16935 PF03180 NLPA lipoprotein JAV55_16940 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_16945 PF00005 ABC transporter JAV55_16945 PF09383 NIL domain JAV55_16950 PF02036 SCP-2 sterol transfer family JAV55_16955 PF00085 Thioredoxin JAV55_16960 PF01751 Toprim domain JAV55_16965 PF10830 Protein of unknown function (DUF2553) JAV55_16970 PF01597 Glycine cleavage H-protein JAV55_16975 PF03960 ArsC family JAV55_16980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JAV55_16980 PF02770 Acyl-CoA dehydrogenase, middle domain JAV55_16980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JAV55_16985 PF00108 Thiolase, N-terminal domain JAV55_16985 PF02803 Thiolase, C-terminal domain JAV55_16990 PF00378 Enoyl-CoA hydratase/isomerase JAV55_16990 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JAV55_16990 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JAV55_16995 PF14115 YuzL-like protein JAV55_17005 PF07875 Coat F domain JAV55_17010 PF10835 Protein of unknown function (DUF2573) JAV55_17020 PF00005 ABC transporter JAV55_17025 PF01032 FecCD transport family JAV55_17030 PF01032 FecCD transport family JAV55_17035 PF01497 Periplasmic binding protein JAV55_17040 PF14039 YusW-like protein JAV55_17050 PF07943 Penicillin-binding protein 5, C-terminal domain JAV55_17050 PF00768 D-alanyl-D-alanine carboxypeptidase JAV55_17055 PF00106 short chain dehydrogenase JAV55_17060 PF00210 Ferritin-like domain JAV55_17065 PF13180 PDZ domain JAV55_17070 PF00072 Response regulator receiver domain JAV55_17070 PF00486 Transcriptional regulatory protein, C terminal JAV55_17075 PF00512 His Kinase A (phospho-acceptor) domain JAV55_17075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_17075 PF00672 HAMP domain JAV55_17085 PF00440 Bacterial regulatory proteins, tetR family JAV55_17090 PF10415 Fumarase C C-terminus JAV55_17090 PF00206 Lyase JAV55_17095 PF13113 Protein of unknown function (DUF3970) JAV55_17100 PF03323 Bacillus/Clostridium GerA spore germination protein JAV55_17105 PF03845 Spore germination protein JAV55_17110 PF05504 Spore germination B3/ GerAC like, C-terminal JAV55_17120 PF00196 Bacterial regulatory proteins, luxR family JAV55_17120 PF00072 Response regulator receiver domain JAV55_17125 PF07730 Histidine kinase JAV55_17125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_17125 PF00672 HAMP domain JAV55_17130 PF09922 Cell wall-active antibiotics response 4TMS YvqF JAV55_17140 PF04012 PspA/IM30 family JAV55_17150 PF01095 Pectinesterase JAV55_17155 PF01923 Cobalamin adenosyltransferase JAV55_17175 PF00701 Dihydrodipicolinate synthetase family JAV55_17180 PF00005 ABC transporter JAV55_17185 PF01032 FecCD transport family JAV55_17190 PF01497 Periplasmic binding protein JAV55_17195 PF00392 Bacterial regulatory proteins, gntR family JAV55_17195 PF07729 FCD domain JAV55_17200 PF00106 short chain dehydrogenase JAV55_17205 PF03475 3-alpha domain JAV55_17205 PF03473 MOSC domain JAV55_17210 PF03466 LysR substrate binding domain JAV55_17210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JAV55_17215 PF00295 Glycosyl hydrolases family 28 JAV55_17220 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JAV55_17220 PF08666 SAF domain JAV55_17225 PF08125 Mannitol dehydrogenase C-terminal domain JAV55_17225 PF01232 Mannitol dehydrogenase Rossmann domain JAV55_17230 PF00356 Bacterial regulatory proteins, lacI family JAV55_17240 PF02614 Glucuronate isomerase JAV55_17245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_17245 PF00512 His Kinase A (phospho-acceptor) domain JAV55_17250 PF00486 Transcriptional regulatory protein, C terminal JAV55_17250 PF00072 Response regulator receiver domain JAV55_17255 PF00005 ABC transporter JAV55_17260 PF01032 FecCD transport family JAV55_17265 PF01032 FecCD transport family JAV55_17270 PF13520 Amino acid permease JAV55_17275 PF09575 Small spore protein J (Spore_SspJ) JAV55_17280 PF04307 LexA-binding, inner membrane-associated putative hydrolase JAV55_17285 PF00884 Sulfatase JAV55_17290 PF07690 Major Facilitator Superfamily JAV55_17295 PF00248 Aldo/keto reductase family JAV55_17300 PF00480 ROK family JAV55_17305 PF00266 Aminotransferase class-V JAV55_17315 PF13538 UvrD-like helicase C-terminal domain JAV55_17320 PF03458 UPF0126 domain JAV55_17325 PF04229 GrpB protein JAV55_17325 PF13673 Acetyltransferase (GNAT) domain JAV55_17330 PF00583 Acetyltransferase (GNAT) family JAV55_17330 PF13673 Acetyltransferase (GNAT) domain JAV55_17335 PF02600 Disulfide bond formation protein DsbB JAV55_17340 PF13462 Thioredoxin JAV55_17345 PF00403 Heavy-metal-associated domain JAV55_17355 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_17360 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_17365 PF13802 Galactose mutarotase-like JAV55_17365 PF01055 Glycosyl hydrolases family 31 JAV55_17370 PF01915 Glycosyl hydrolase family 3 C-terminal domain JAV55_17370 PF00933 Glycosyl hydrolase family 3 N terminal domain JAV55_17370 PF14310 Fibronectin type III-like domain JAV55_17375 PF00005 ABC transporter JAV55_17380 PF00950 ABC 3 transport family JAV55_17385 PF01297 Zinc-uptake complex component A periplasmic JAV55_17395 PF01418 Helix-turn-helix domain, rpiR family JAV55_17395 PF01380 SIS domain JAV55_17400 PF00294 pfkB family carbohydrate kinase JAV55_17400 PF01467 Cytidylyltransferase-like JAV55_17405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JAV55_17405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JAV55_17415 PF01116 Fructose-bisphosphate aldolase class-II JAV55_17425 PF00403 Heavy-metal-associated domain JAV55_17430 PF00403 Heavy-metal-associated domain JAV55_17435 PF02583 Metal-sensitive transcriptional repressor JAV55_17440 PF01965 DJ-1/PfpI family JAV55_17445 PF00455 DeoR C terminal sensor domain JAV55_17445 PF08220 DeoR-like helix-turn-helix domain JAV55_17450 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JAV55_17450 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JAV55_17455 PF01261 Xylose isomerase-like TIM barrel JAV55_17465 PF00596 Class II Aldolase and Adducin N-terminal domain JAV55_17470 PF07690 Major Facilitator Superfamily JAV55_17475 PF07690 Major Facilitator Superfamily JAV55_17480 PF16715 Cyclodipeptide synthase JAV55_17485 PF00067 Cytochrome P450 JAV55_17495 PF01047 MarR family JAV55_17500 PF01425 Amidase JAV55_17505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JAV55_17505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JAV55_17510 PF02525 Flavodoxin-like fold JAV55_17515 PF17773 UPF0176 acylphosphatase like domain JAV55_17515 PF00581 Rhodanese-like domain JAV55_17515 PF12368 Rhodanase C-terminal JAV55_17525 PF04545 Sigma-70, region 4 JAV55_17530 PF12841 YvrJ protein family JAV55_17535 PF00190 Cupin JAV55_17540 PF14184 Regulatory protein YrvL JAV55_17565 PF00717 Peptidase S24-like JAV55_17565 PF01726 LexA DNA binding domain JAV55_17620 PF01510 N-acetylmuramoyl-L-alanine amidase JAV55_17620 PF01471 Putative peptidoglycan binding domain JAV55_17625 PF04688 SPP1 phage holin JAV55_17630 PF10779 Haemolysin XhlA JAV55_17655 PF13457 GW (Gly-Tryp) dipeptide domain JAV55_17655 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JAV55_17665 PF01464 Transglycosylase SLT domain JAV55_17710 PF00574 Clp protease JAV55_17725 PF03354 Phage Terminase JAV55_17750 PF11122 Inner spore coat protein D JAV55_17870 PF01668 SmpB protein JAV55_17875 PF00575 S1 RNA binding domain JAV55_17875 PF00773 RNB domain JAV55_17875 PF08206 Ribonuclease B OB domain JAV55_17875 PF17876 Cold shock domain JAV55_17880 PF12146 Serine aminopeptidase, S33 JAV55_17885 PF03840 Preprotein translocase SecG subunit JAV55_17890 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JAV55_17890 PF18277 AbrB C-terminal domain JAV55_17895 PF01381 Helix-turn-helix JAV55_17910 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_17915 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JAV55_17920 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_17925 PF00005 ABC transporter JAV55_17925 PF00571 CBS domain JAV55_17930 PF12802 MarR family JAV55_17935 PF01914 MarC family integral membrane protein JAV55_17950 PF01497 Periplasmic binding protein JAV55_17960 PF01965 DJ-1/PfpI family JAV55_17965 PF00113 Enolase, C-terminal TIM barrel domain JAV55_17965 PF03952 Enolase, N-terminal domain JAV55_17970 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JAV55_17970 PF01676 Metalloenzyme superfamily JAV55_17975 PF00121 Triosephosphate isomerase JAV55_17980 PF00162 Phosphoglycerate kinase JAV55_17985 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JAV55_17985 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JAV55_17990 PF04198 Putative sugar-binding domain JAV55_17995 PF00296 Luciferase-like monooxygenase JAV55_18000 PF00324 Amino acid permease JAV55_18010 PF00005 ABC transporter JAV55_18020 PF02589 LUD domain JAV55_18025 PF13183 4Fe-4S dicluster domain JAV55_18025 PF02589 LUD domain JAV55_18025 PF11870 Domain of unknown function (DUF3390) JAV55_18030 PF02754 Cysteine-rich domain JAV55_18035 PF07729 FCD domain JAV55_18035 PF00392 Bacterial regulatory proteins, gntR family JAV55_18040 PF02652 L-lactate permease JAV55_18045 PF04552 Sigma-54, DNA binding domain JAV55_18045 PF00309 Sigma-54 factor, Activator interacting domain (AID) JAV55_18045 PF04963 Sigma-54 factor, core binding domain JAV55_18050 PF09628 YvfG protein JAV55_18055 PF04230 Polysaccharide pyruvyl transferase JAV55_18060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JAV55_18065 PF17836 PglD N-terminal domain JAV55_18065 PF00132 Bacterial transferase hexapeptide (six repeats) JAV55_18070 PF02397 Bacterial sugar transferase JAV55_18075 PF14667 Polysaccharide biosynthesis C-terminal domain JAV55_18075 PF01943 Polysaccharide biosynthesis protein JAV55_18080 PF00535 Glycosyl transferase family 2 JAV55_18085 PF04230 Polysaccharide pyruvyl transferase JAV55_18090 PF00535 Glycosyl transferase family 2 JAV55_18100 PF00534 Glycosyl transferases group 1 JAV55_18100 PF13439 Glycosyltransferase Family 4 JAV55_18105 PF00535 Glycosyl transferase family 2 JAV55_18110 PF13439 Glycosyltransferase Family 4 JAV55_18110 PF00534 Glycosyl transferases group 1 JAV55_18115 PF02719 Polysaccharide biosynthesis protein JAV55_18120 PF13614 AAA domain JAV55_18125 PF02706 Chain length determinant protein JAV55_18130 PF08671 Anti-repressor SinI JAV55_18130 PF01381 Helix-turn-helix JAV55_18140 PF02525 Flavodoxin-like fold JAV55_18145 PF07690 Major Facilitator Superfamily JAV55_18150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JAV55_18150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JAV55_18150 PF01842 ACT domain JAV55_18155 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JAV55_18160 PF17042 Nucleotide-binding C-terminal domain JAV55_18160 PF07005 Sugar-binding N-terminal domain JAV55_18165 PF00465 Iron-containing alcohol dehydrogenase JAV55_18170 PF00701 Dihydrodipicolinate synthetase family JAV55_18175 PF00158 Sigma-54 interaction domain JAV55_18175 PF13426 PAS domain JAV55_18175 PF02954 Bacterial regulatory protein, Fis family JAV55_18180 PF01638 HxlR-like helix-turn-helix JAV55_18185 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JAV55_18190 PF02435 Levansucrase/Invertase JAV55_18195 PF00251 Glycosyl hydrolases family 32 N-terminal domain JAV55_18195 PF08244 Glycosyl hydrolases family 32 C terminal JAV55_18210 PF00574 Clp protease JAV55_18215 PF03641 Possible lysine decarboxylase JAV55_18220 PF03819 MazG nucleotide pyrophosphohydrolase domain JAV55_18225 PF01966 HD domain JAV55_18230 PF01740 STAS domain JAV55_18230 PF00916 Sulfate permease family JAV55_18235 PF00484 Carbonic anhydrase JAV55_18240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JAV55_18240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JAV55_18245 PF01613 Flavin reductase like domain JAV55_18255 PF00545 ribonuclease JAV55_18260 PF01337 Barstar (barnase inhibitor) JAV55_18265 PF00797 N-acetyltransferase JAV55_18270 PF00381 PTS HPr component phosphorylation site JAV55_18275 PF10298 WhiA N-terminal LAGLIDADG-like domain JAV55_18275 PF02650 WhiA C-terminal HTH domain JAV55_18275 PF14527 WhiA LAGLIDADG-like domain JAV55_18280 PF01933 Uncharacterised protein family UPF0052 JAV55_18285 PF03668 P-loop ATPase protein family JAV55_18290 PF00293 NUDIX domain JAV55_18295 PF07992 Pyridine nucleotide-disulphide oxidoreductase JAV55_18310 PF01502 Phosphoribosyl-AMP cyclohydrolase JAV55_18310 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JAV55_18315 PF00977 Histidine biosynthesis protein JAV55_18320 PF00977 Histidine biosynthesis protein JAV55_18325 PF00117 Glutamine amidotransferase class-I JAV55_18330 PF00475 Imidazoleglycerol-phosphate dehydratase JAV55_18335 PF00815 Histidinol dehydrogenase JAV55_18340 PF01634 ATP phosphoribosyltransferase JAV55_18345 PF13393 Histidyl-tRNA synthetase JAV55_18350 PF13529 Peptidase_C39 like family JAV55_18355 PF03211 Pectate lyase JAV55_18360 PF14602 Hexapeptide repeat of succinyl-transferase JAV55_18365 PF13419 Haloacid dehalogenase-like hydrolase JAV55_18370 PF07670 Nucleoside recognition JAV55_18375 PF01790 Prolipoprotein diacylglyceryl transferase JAV55_18380 PF02603 HPr Serine kinase N terminus JAV55_18380 PF07475 HPr Serine kinase C-terminal domain JAV55_18385 PF01047 MarR family JAV55_18390 PF07690 Major Facilitator Superfamily JAV55_18395 PF00149 Calcineurin-like phosphoesterase JAV55_18400 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JAV55_18405 PF04024 PspC domain JAV55_18410 PF13349 Putative adhesin JAV55_18430 PF00005 ABC transporter JAV55_18430 PF17755 UvrA DNA-binding domain JAV55_18430 PF17760 UvrA interaction domain JAV55_18435 PF12344 Ultra-violet resistance protein B JAV55_18435 PF02151 UvrB/uvrC motif JAV55_18435 PF04851 Type III restriction enzyme, res subunit JAV55_18435 PF00271 Helicase conserved C-terminal domain JAV55_18435 PF17757 UvrB interaction domain JAV55_18440 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) JAV55_18450 PF17820 PDZ domain JAV55_18455 PF17423 Swarming motility protein JAV55_18460 PF01471 Putative peptidoglycan binding domain JAV55_18460 PF03572 Peptidase family S41 JAV55_18460 PF17820 PDZ domain JAV55_18465 PF00180 Isocitrate/isopropylmalate dehydrogenase JAV55_18470 PF00877 NlpC/P60 family JAV55_18475 PF18075 FtsX extracellular domain JAV55_18475 PF02687 FtsX-like permease family JAV55_18480 PF00005 ABC transporter JAV55_18485 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JAV55_18490 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JAV55_18490 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JAV55_18500 PF01043 SecA preprotein cross-linking domain JAV55_18500 PF07517 SecA DEAD-like domain JAV55_18500 PF02810 SEC-C motif JAV55_18500 PF07516 SecA Wing and Scaffold domain JAV55_18505 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JAV55_18505 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JAV55_18520 PF02561 Flagellar protein FliS JAV55_18525 PF07196 Flagellin hook IN motif JAV55_18525 PF07195 Flagellar hook-associated protein 2 C-terminus JAV55_18525 PF02465 Flagellar hook-associated protein 2 N-terminus JAV55_18530 PF03646 FlaG protein JAV55_18535 PF00700 Bacterial flagellin C-terminal helical region JAV55_18535 PF00669 Bacterial flagellin N-terminal helical region JAV55_18540 PF02599 Global regulator protein family JAV55_18545 PF02623 FliW protein JAV55_18555 PF00700 Bacterial flagellin C-terminal helical region JAV55_18555 PF00669 Bacterial flagellin N-terminal helical region JAV55_18560 PF00460 Flagella basal body rod protein JAV55_18560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JAV55_18565 PF05130 FlgN protein JAV55_18570 PF04316 Anti-sigma-28 factor, FlgM JAV55_18585 PF10719 Late competence development protein ComFB JAV55_18590 PF00271 Helicase conserved C-terminal domain JAV55_18590 PF04851 Type III restriction enzyme, res subunit JAV55_18595 PF02645 Uncharacterised protein, DegV family COG1307 JAV55_18600 PF00196 Bacterial regulatory proteins, luxR family JAV55_18600 PF00072 Response regulator receiver domain JAV55_18605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_18605 PF05384 Sensor protein DegS JAV55_18605 PF07730 Histidine kinase JAV55_18610 PF01205 Uncharacterized protein family UPF0029 JAV55_18610 PF09186 Domain of unknown function (DUF1949) JAV55_18615 PF03816 Cell envelope-related transcriptional attenuator domain JAV55_18625 PF00953 Glycosyl transferase family 4 JAV55_18635 PF00535 Glycosyl transferase family 2 JAV55_18640 PF02706 Chain length determinant protein JAV55_18645 PF04932 O-Antigen ligase JAV55_18650 PF16363 GDP-mannose 4,6 dehydratase JAV55_18655 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JAV55_18655 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JAV55_18655 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JAV55_18660 PF00534 Glycosyl transferases group 1 JAV55_18660 PF13439 Glycosyltransferase Family 4 JAV55_18665 PF01943 Polysaccharide biosynthesis protein JAV55_18665 PF14667 Polysaccharide biosynthesis C-terminal domain JAV55_18670 PF02397 Bacterial sugar transferase JAV55_18675 PF04122 Putative cell wall binding repeat 2 JAV55_18675 PF01520 N-acetylmuramoyl-L-alanine amidase JAV55_18680 PF04122 Putative cell wall binding repeat 2 JAV55_18680 PF08486 Stage II sporulation protein JAV55_18690 PF03816 Cell envelope-related transcriptional attenuator domain JAV55_18695 PF02350 UDP-N-acetylglucosamine 2-epimerase JAV55_18705 PF00483 Nucleotidyl transferase JAV55_18710 PF00005 ABC transporter JAV55_18715 PF01061 ABC-2 type transporter JAV55_18720 PF00535 Glycosyl transferase family 2 JAV55_18720 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JAV55_18725 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JAV55_18730 PF01467 Cytidylyltransferase-like JAV55_18735 PF03808 Glycosyl transferase WecB/TagA/CpsF family JAV55_18740 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JAV55_18745 PF05036 Sporulation related domain JAV55_18745 PF08239 Bacterial SH3 domain JAV55_18745 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JAV55_18750 PF01238 Phosphomannose isomerase type I JAV55_18755 PF04055 Radical SAM superfamily JAV55_18760 PF13597 Anaerobic ribonucleoside-triphosphate reductase JAV55_18760 PF03477 ATP cone domain JAV55_18765 PF03812 2-keto-3-deoxygluconate permease JAV55_18770 PF01081 KDPG and KHG aldolase JAV55_18775 PF00294 pfkB family carbohydrate kinase JAV55_18780 PF00356 Bacterial regulatory proteins, lacI family JAV55_18785 PF04962 KduI/IolB family JAV55_18795 PF13823 Alcohol dehydrogenase GroES-associated JAV55_18795 PF00107 Zinc-binding dehydrogenase JAV55_18795 PF08240 Alcohol dehydrogenase GroES-like domain JAV55_18805 PF00083 Sugar (and other) transporter JAV55_18810 PF03816 Cell envelope-related transcriptional attenuator domain JAV55_18820 PF00877 NlpC/P60 family JAV55_18830 PF09587 Bacterial capsule synthesis protein PGA_cap JAV55_18835 PF14102 Capsule biosynthesis CapC JAV55_18840 PF08245 Mur ligase middle domain JAV55_18845 PF00356 Bacterial regulatory proteins, lacI family JAV55_18850 PF00294 pfkB family carbohydrate kinase JAV55_18855 PF05025 RbsD / FucU transport protein family JAV55_18860 PF00005 ABC transporter JAV55_18865 PF02653 Branched-chain amino acid transport system / permease component JAV55_18870 PF13407 Periplasmic binding protein domain JAV55_18875 PF03306 Alpha-acetolactate decarboxylase JAV55_18880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JAV55_18880 PF00205 Thiamine pyrophosphate enzyme, central domain JAV55_18880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JAV55_18885 PF03466 LysR substrate binding domain JAV55_18885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JAV55_18895 PF13404 AsnC-type helix-turn-helix domain JAV55_18895 PF01037 Lrp/AsnC ligand binding domain JAV55_18900 PF02417 Chromate transporter JAV55_18905 PF02417 Chromate transporter JAV55_18915 PF02706 Chain length determinant protein JAV55_18915 PF13807 G-rich domain on putative tyrosine kinase JAV55_18925 PF04434 SWIM zinc finger JAV55_18930 PF00176 SNF2 family N-terminal domain JAV55_18930 PF00271 Helicase conserved C-terminal domain JAV55_18930 PF12419 SNF2 Helicase protein JAV55_18940 PF00455 DeoR C terminal sensor domain JAV55_18940 PF08220 DeoR-like helix-turn-helix domain JAV55_18945 PF00923 Transaldolase/Fructose-6-phosphate aldolase JAV55_18950 PF00106 short chain dehydrogenase JAV55_18955 PF03829 PTS system glucitol/sorbitol-specific IIA component JAV55_18960 PF03612 Sorbitol phosphotransferase enzyme II N-terminus JAV55_18960 PF07663 Sorbitol phosphotransferase enzyme II C-terminus JAV55_18965 PF03608 PTS system enzyme II sorbitol-specific factor JAV55_18975 PF04198 Putative sugar-binding domain JAV55_18975 PF13936 Helix-turn-helix domain JAV55_18980 PF00436 Single-strand binding protein family JAV55_18990 PF14183 YwpF-like protein JAV55_18995 PF01741 Large-conductance mechanosensitive channel, MscL JAV55_19000 PF07977 FabA-like domain JAV55_19005 PF00460 Flagella basal body rod protein JAV55_19005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JAV55_19010 PF00460 Flagella basal body rod protein JAV55_19010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JAV55_19020 PF12116 Stage III sporulation protein D JAV55_19025 PF01047 MarR family JAV55_19030 PF07690 Major Facilitator Superfamily JAV55_19035 PF01569 PAP2 superfamily JAV55_19040 PF02833 DHHA2 domain JAV55_19040 PF01368 DHH family JAV55_19045 PF05067 Manganese containing catalase JAV55_19050 PF09844 Uncharacterized conserved protein (COG2071) JAV55_19055 PF00571 CBS domain JAV55_19060 PF01544 CorA-like Mg2+ transporter protein JAV55_19065 PF01595 Cyclin M transmembrane N-terminal domain JAV55_19065 PF03471 Transporter associated domain JAV55_19065 PF00571 CBS domain JAV55_19070 PF00909 Ammonium Transporter Family JAV55_19075 PF00543 Nitrogen regulatory protein P-II JAV55_19080 PF00574 Clp protease JAV55_19085 PF08281 Sigma-70, region 4 JAV55_19085 PF04542 Sigma-70 region 2 JAV55_19085 PF12680 SnoaL-like domain JAV55_19090 PF01551 Peptidase family M23 JAV55_19095 PF00583 Acetyltransferase (GNAT) family JAV55_19100 PF17370 Family of unknown function (DUF5392) JAV55_19105 PF13396 Phospholipase_D-nuclease N-terminal JAV55_19105 PF13091 PLD-like domain JAV55_19115 PF07690 Major Facilitator Superfamily JAV55_19120 PF03621 MbtH-like protein JAV55_19125 PF00975 Thioesterase domain JAV55_19125 PF00668 Condensation domain JAV55_19125 PF13193 AMP-binding enzyme C-terminal domain JAV55_19125 PF00501 AMP-binding enzyme JAV55_19125 PF00550 Phosphopantetheine attachment site JAV55_19130 PF00857 Isochorismatase family JAV55_19130 PF00550 Phosphopantetheine attachment site JAV55_19135 PF13193 AMP-binding enzyme C-terminal domain JAV55_19135 PF00501 AMP-binding enzyme JAV55_19140 PF00425 chorismate binding enzyme JAV55_19145 PF00106 short chain dehydrogenase JAV55_19150 PF00756 Putative esterase JAV55_19155 PF01032 FecCD transport family JAV55_19160 PF01032 FecCD transport family JAV55_19165 PF01497 Periplasmic binding protein JAV55_19170 PF01497 Periplasmic binding protein JAV55_19170 PF12833 Helix-turn-helix domain JAV55_19175 PF17319 Family of unknown function (DUF5362) JAV55_19180 PF13460 NAD(P)H-binding JAV55_19185 PF02082 Transcriptional regulator JAV55_19200 PF04055 Radical SAM superfamily JAV55_19200 PF06463 Molybdenum Cofactor Synthesis C JAV55_19205 PF02634 FdhD/NarQ family JAV55_19210 PF07690 Major Facilitator Superfamily JAV55_19215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JAV55_19215 PF00384 Molybdopterin oxidoreductase JAV55_19215 PF10518 TAT (twin-arginine translocation) pathway signal sequence JAV55_19215 PF01568 Molydopterin dinucleotide binding domain JAV55_19220 PF00092 von Willebrand factor type A domain JAV55_19225 PF00092 von Willebrand factor type A domain JAV55_19230 PF08486 Stage II sporulation protein JAV55_19235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JAV55_19240 PF08680 TATA-box binding JAV55_19245 PF06612 Protein of unknown function (DUF1146) JAV55_19250 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JAV55_19250 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JAV55_19255 PF02874 ATP synthase alpha/beta family, beta-barrel domain JAV55_19255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JAV55_19260 PF00231 ATP synthase JAV55_19265 PF00306 ATP synthase alpha/beta chain, C terminal domain JAV55_19265 PF02874 ATP synthase alpha/beta family, beta-barrel domain JAV55_19265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JAV55_19270 PF00213 ATP synthase delta (OSCP) subunit JAV55_19275 PF00430 ATP synthase B/B' CF(0) JAV55_19280 PF00137 ATP synthase subunit C JAV55_19285 PF00119 ATP synthase A chain JAV55_19290 PF03899 ATP synthase I chain JAV55_19300 PF00464 Serine hydroxymethyltransferase JAV55_19305 PF04260 Protein of unknown function (DUF436) JAV55_19310 PF02502 Ribose/Galactose Isomerase JAV55_19315 PF01451 Low molecular weight phosphotyrosine protein phosphatase JAV55_19320 PF02659 Putative manganese efflux pump JAV55_19325 PF03481 Putative GTP-binding controlling metal-binding JAV55_19325 PF01300 Telomere recombination JAV55_19335 PF09551 Stage II sporulation protein R (spore_II_R) JAV55_19340 PF07690 Major Facilitator Superfamily JAV55_19345 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JAV55_19345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JAV55_19350 PF05116 Sucrose-6F-phosphate phosphohydrolase JAV55_19355 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JAV55_19360 PF00356 Bacterial regulatory proteins, lacI family JAV55_19365 PF17827 PrmC N-terminal domain JAV55_19365 PF05175 Methyltransferase small domain JAV55_19370 PF00472 RF-1 domain JAV55_19370 PF03462 PCRF domain JAV55_19375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JAV55_19380 PF13411 MerR HTH family regulatory protein JAV55_19385 PF03547 Membrane transport protein JAV55_19390 PF00390 Malic enzyme, N-terminal domain JAV55_19390 PF03949 Malic enzyme, NAD binding domain JAV55_19395 PF00265 Thymidine kinase JAV55_19400 PF01197 Ribosomal protein L31 JAV55_19405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JAV55_19405 PF07497 Rho termination factor, RNA-binding domain JAV55_19405 PF07498 Rho termination factor, N-terminal domain JAV55_19410 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JAV55_19415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JAV55_19420 PF00923 Transaldolase/Fructose-6-phosphate aldolase JAV55_19425 PF01116 Fructose-bisphosphate aldolase class-II JAV55_19430 PF00072 Response regulator receiver domain JAV55_19435 PF10740 Domain of unknown function (DUF2529) JAV55_19440 PF06418 CTP synthase N-terminus JAV55_19440 PF00117 Glutamine amidotransferase class-I JAV55_19445 PF05066 HB1, ASXL, restriction endonuclease HTH domain JAV55_19455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JAV55_19455 PF02770 Acyl-CoA dehydrogenase, middle domain JAV55_19455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JAV55_19460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JAV55_19460 PF02770 Acyl-CoA dehydrogenase, middle domain JAV55_19460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JAV55_19465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JAV55_19465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JAV55_19470 PF02803 Thiolase, C-terminal domain JAV55_19470 PF00108 Thiolase, N-terminal domain JAV55_19475 PF13183 4Fe-4S dicluster domain JAV55_19475 PF02754 Cysteine-rich domain JAV55_19480 PF13091 PLD-like domain JAV55_19490 PF00750 tRNA synthetases class I (R) JAV55_19490 PF05746 DALR anticodon binding domain JAV55_19490 PF03485 Arginyl tRNA synthetase N terminal domain JAV55_19495 PF09148 Domain of unknown function (DUF1934) JAV55_19500 PF00491 Arginase family JAV55_19505 PF17284 Spermidine synthase tetramerisation domain JAV55_19520 PF00912 Transglycosylase JAV55_19520 PF00905 Penicillin binding protein transpeptidase domain JAV55_19525 PF08741 YwhD family JAV55_19530 PF02163 Peptidase family M50 JAV55_19535 PF01361 Tautomerase enzyme JAV55_19550 PF01966 HD domain JAV55_19555 PF07293 Protein of unknown function (DUF1450) JAV55_19565 PF14154 Domain of unknown function (DUF4306) JAV55_19570 PF03099 Biotin/lipoate A/B protein ligase family JAV55_19575 PF01494 FAD binding domain JAV55_19580 PF07690 Major Facilitator Superfamily JAV55_19590 PF01361 Tautomerase enzyme JAV55_19600 PF00171 Aldehyde dehydrogenase family JAV55_19605 PF09339 IclR helix-turn-helix domain JAV55_19605 PF01614 Bacterial transcriptional regulator JAV55_19615 PF01515 Phosphate acetyl/butaryl transferase JAV55_19620 PF06778 Chlorite dismutase JAV55_19625 PF17735 Biofilm surface layer A JAV55_19630 PF02386 Cation transport protein JAV55_19635 PF09671 Spore coat protein (Spore_GerQ) JAV55_19650 PF00005 ABC transporter JAV55_19660 PF00072 Response regulator receiver domain JAV55_19660 PF00196 Bacterial regulatory proteins, luxR family JAV55_19665 PF04241 Protein of unknown function (DUF423) JAV55_19670 PF00860 Permease family JAV55_19675 PF17261 Family of unknown function (DUF5327) JAV55_19680 PF00171 Aldehyde dehydrogenase family JAV55_19685 PF03167 Uracil DNA glycosylase superfamily JAV55_19690 PF00535 Glycosyl transferase family 2 JAV55_19695 PF08543 Phosphomethylpyrimidine kinase JAV55_19705 PF00251 Glycosyl hydrolases family 32 N-terminal domain JAV55_19705 PF08244 Glycosyl hydrolases family 32 C terminal JAV55_19710 PF00367 phosphotransferase system, EIIB JAV55_19710 PF02378 Phosphotransferase system, EIIC JAV55_19715 PF00874 PRD domain JAV55_19715 PF03123 CAT RNA binding domain JAV55_19725 PF02225 PA domain JAV55_19725 PF05922 Peptidase inhibitor I9 JAV55_19725 PF13860 FlgD Ig-like domain JAV55_19725 PF00082 Subtilase family JAV55_19735 PF00296 Luciferase-like monooxygenase JAV55_19740 PF00881 Nitroreductase family JAV55_19745 PF01546 Peptidase family M20/M25/M40 JAV55_19745 PF07687 Peptidase dimerisation domain JAV55_19750 PF01098 Cell cycle protein JAV55_19755 PF01098 Cell cycle protein JAV55_19760 PF07670 Nucleoside recognition JAV55_19765 PF17368 Spore morphogenesis and germination YwcE JAV55_19775 PF00583 Acetyltransferase (GNAT) family JAV55_19780 PF00005 ABC transporter JAV55_19785 PF00005 ABC transporter JAV55_19805 PF00072 Response regulator receiver domain JAV55_19805 PF00196 Bacterial regulatory proteins, luxR family JAV55_19810 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JAV55_19815 PF00510 Cytochrome c oxidase subunit III JAV55_19820 PF00115 Cytochrome C and Quinol oxidase polypeptide I JAV55_19825 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JAV55_19825 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JAV55_19830 PF16363 GDP-mannose 4,6 dehydratase JAV55_19845 PF04341 Protein of unknown function, DUF485 JAV55_19850 PF00474 Sodium:solute symporter family JAV55_19855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JAV55_19855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JAV55_19860 PF01261 Xylose isomerase-like TIM barrel JAV55_19865 PF00480 ROK family JAV55_19870 PF02581 Thiamine monophosphate synthase JAV55_19875 PF02110 Hydroxyethylthiazole kinase family JAV55_19880 PF03466 LysR substrate binding domain JAV55_19880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JAV55_19895 PF03788 LrgA family JAV55_19900 PF04172 LrgB-like family JAV55_19910 PF00474 Sodium:solute symporter family JAV55_19915 PF10672 S-adenosylmethionine-dependent methyltransferase JAV55_19915 PF17785 PUA-like domain JAV55_19920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JAV55_19925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JAV55_19925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JAV55_19930 PF01501 Glycosyl transferase family 8 JAV55_19940 PF07730 Histidine kinase JAV55_19940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_19945 PF00072 Response regulator receiver domain JAV55_19945 PF00196 Bacterial regulatory proteins, luxR family JAV55_19950 PF03176 MMPL family JAV55_19955 PF09529 Integral membrane protein (intg_mem_TP0381) JAV55_19960 PF07690 Major Facilitator Superfamily JAV55_19965 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JAV55_19965 PF13378 Enolase C-terminal domain-like JAV55_19970 PF01081 KDPG and KHG aldolase JAV55_19975 PF00294 pfkB family carbohydrate kinase JAV55_19980 PF09339 IclR helix-turn-helix domain JAV55_19980 PF01614 Bacterial transcriptional regulator JAV55_19985 PF04389 Peptidase family M28 JAV55_19985 PF02225 PA domain JAV55_19990 PF07690 Major Facilitator Superfamily JAV55_20000 PF04607 Region found in RelA / SpoT proteins JAV55_20010 PF12459 D-Ala-teichoic acid biosynthesis protein JAV55_20015 PF13193 AMP-binding enzyme C-terminal domain JAV55_20015 PF00501 AMP-binding enzyme JAV55_20020 PF03062 MBOAT, membrane-bound O-acyltransferase family JAV55_20025 PF00550 Phosphopantetheine attachment site JAV55_20030 PF04914 DltD protein JAV55_20035 PF01063 Amino-transferase class IV JAV55_20040 PF07690 Major Facilitator Superfamily JAV55_20045 PF11975 Family 4 glycosyl hydrolase C-terminal domain JAV55_20045 PF02056 Family 4 glycosyl hydrolase JAV55_20050 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JAV55_20055 PF02378 Phosphotransferase system, EIIC JAV55_20060 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JAV55_20065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JAV55_20065 PF08279 HTH domain JAV55_20065 PF05043 Mga helix-turn-helix domain JAV55_20065 PF00874 PRD domain JAV55_20070 PF02245 Methylpurine-DNA glycosylase (MPG) JAV55_20075 PF07729 FCD domain JAV55_20075 PF00392 Bacterial regulatory proteins, gntR family JAV55_20080 PF00285 Citrate synthase, C-terminal domain JAV55_20085 PF03972 MmgE/PrpD family JAV55_20105 PF00664 ABC transporter transmembrane region JAV55_20105 PF00005 ABC transporter JAV55_20110 PF13472 GDSL-like Lipase/Acylhydrolase family JAV55_20115 PF17735 Biofilm surface layer A JAV55_20120 PF17735 Biofilm surface layer A JAV55_20125 PF07690 Major Facilitator Superfamily JAV55_20130 PF12679 ABC-2 family transporter protein JAV55_20135 PF00005 ABC transporter JAV55_20135 PF13732 Domain of unknown function (DUF4162) JAV55_20140 PF13396 Phospholipase_D-nuclease N-terminal JAV55_20155 PF04542 Sigma-70 region 2 JAV55_20155 PF08281 Sigma-70, region 4 JAV55_20160 PF07690 Major Facilitator Superfamily JAV55_20165 PF00199 Catalase JAV55_20165 PF06628 Catalase-related immune-responsive JAV55_20170 PF00199 Catalase JAV55_20170 PF06628 Catalase-related immune-responsive JAV55_20175 PF01475 Ferric uptake regulator family JAV55_20180 PF00762 Ferrochelatase JAV55_20185 PF12679 ABC-2 family transporter protein JAV55_20190 PF00005 ABC transporter JAV55_20205 PF00005 ABC transporter JAV55_20225 PF00082 Subtilase family JAV55_20230 PF00664 ABC transporter transmembrane region JAV55_20230 PF00005 ABC transporter JAV55_20230 PF03412 Peptidase C39 family JAV55_20240 PF16934 Two-component Enterococcus faecalis cytolysin (EFC) JAV55_20245 PF14867 Lantibiotic alpha JAV55_20255 PF00544 Pectate lyase JAV55_20260 PF01256 Carbohydrate kinase JAV55_20265 PF00005 ABC transporter JAV55_20265 PF00664 ABC transporter transmembrane region JAV55_20270 PF00664 ABC transporter transmembrane region JAV55_20270 PF00005 ABC transporter JAV55_20275 PF02322 Cytochrome bd terminal oxidase subunit II JAV55_20280 PF01654 Cytochrome bd terminal oxidase subunit I JAV55_20285 PF01226 Formate/nitrite transporter JAV55_20295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JAV55_20295 PF00390 Malic enzyme, N-terminal domain JAV55_20295 PF03949 Malic enzyme, NAD binding domain JAV55_20300 PF03553 Na+/H+ antiporter family JAV55_20305 PF00206 Lyase JAV55_20305 PF10415 Fumarase C C-terminus JAV55_20310 PF00710 Asparaginase, N-terminal JAV55_20310 PF17763 Glutaminase/Asparaginase C-terminal domain JAV55_20315 PF01381 Helix-turn-helix JAV55_20320 PF10282 Lactonase, 7-bladed beta-propeller JAV55_20325 PF00072 Response regulator receiver domain JAV55_20325 PF00486 Transcriptional regulatory protein, C terminal JAV55_20330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_20335 PF00005 ABC transporter JAV55_20345 PF06486 Protein of unknown function (DUF1093) JAV55_20360 PF01522 Polysaccharide deacetylase JAV55_20365 PF00155 Aminotransferase class I and II JAV55_20365 PF00392 Bacterial regulatory proteins, gntR family JAV55_20370 PF07238 PilZ domain JAV55_20370 PF00535 Glycosyl transferase family 2 JAV55_20370 PF03552 Cellulose synthase JAV55_20375 PF03390 2-hydroxycarboxylate transporter family JAV55_20380 PF03009 Glycerophosphoryl diester phosphodiesterase family JAV55_20385 PF05901 Excalibur calcium-binding domain JAV55_20395 PF00884 Sulfatase JAV55_20400 PF17353 Family of unknown function (DUF5381) JAV55_20405 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JAV55_20405 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JAV55_20410 PF02863 Arginine repressor, C-terminal domain JAV55_20410 PF01316 Arginine repressor, DNA binding domain JAV55_20420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JAV55_20420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JAV55_20425 PF13520 Amino acid permease JAV55_20430 PF00696 Amino acid kinase family JAV55_20445 PF02378 Phosphotransferase system, EIIC JAV55_20455 PF08281 Sigma-70, region 4 JAV55_20455 PF04542 Sigma-70 region 2 JAV55_20470 PF01546 Peptidase family M20/M25/M40 JAV55_20470 PF07687 Peptidase dimerisation domain JAV55_20475 PF08244 Glycosyl hydrolases family 32 C terminal JAV55_20475 PF00251 Glycosyl hydrolases family 32 N-terminal domain JAV55_20480 PF01306 LacY proton/sugar symporter JAV55_20485 PF00356 Bacterial regulatory proteins, lacI family JAV55_20500 PF01717 Cobalamin-independent synthase, Catalytic domain JAV55_20505 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase JAV55_20510 PF00535 Glycosyl transferase family 2 JAV55_20515 PF01370 NAD dependent epimerase/dehydratase family JAV55_20540 PF07662 Na+ dependent nucleoside transporter C-terminus JAV55_20540 PF01773 Na+ dependent nucleoside transporter N-terminus JAV55_20545 PF00199 Catalase JAV55_20545 PF18011 C-terminal domain found in long catalases JAV55_20545 PF06628 Catalase-related immune-responsive JAV55_20555 PF00232 Glycosyl hydrolase family 1 JAV55_20560 PF02378 Phosphotransferase system, EIIC JAV55_20560 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JAV55_20560 PF00367 phosphotransferase system, EIIB JAV55_20570 PF02361 Cobalt transport protein JAV55_20575 PF00005 ABC transporter JAV55_20580 PF09819 ABC-type cobalt transport system, permease component JAV55_20585 PF03070 TENA/THI-4/PQQC family JAV55_20595 PF00463 Isocitrate lyase family JAV55_20600 PF01274 Malate synthase JAV55_20610 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase JAV55_20615 PF02687 FtsX-like permease family JAV55_20620 PF00005 ABC transporter JAV55_20625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_20630 PF00072 Response regulator receiver domain JAV55_20630 PF00486 Transcriptional regulatory protein, C terminal JAV55_20635 PF00232 Glycosyl hydrolase family 1 JAV55_20640 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JAV55_20640 PF02378 Phosphotransferase system, EIIC JAV55_20640 PF00367 phosphotransferase system, EIIB JAV55_20650 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JAV55_20665 PF04616 Glycosyl hydrolases family 43 JAV55_20665 PF16369 C-terminal lipocalin-like domain JAV55_20670 PF00270 DEAD/DEAH box helicase JAV55_20670 PF03880 DbpA RNA binding domain JAV55_20670 PF00271 Helicase conserved C-terminal domain JAV55_20700 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JAV55_20700 PF02885 Glycosyl transferase family, helical bundle domain JAV55_20700 PF00591 Glycosyl transferase family, a/b domain JAV55_20705 PF01773 Na+ dependent nucleoside transporter N-terminus JAV55_20705 PF07662 Na+ dependent nucleoside transporter C-terminus JAV55_20710 PF01791 DeoC/LacD family aldolase JAV55_20715 PF04198 Putative sugar-binding domain JAV55_20730 PF00990 Diguanylate cyclase, GGDEF domain JAV55_20735 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) JAV55_20745 PF03170 Bacterial cellulose synthase subunit JAV55_20750 PF00155 Aminotransferase class I and II JAV55_20765 PF07478 D-ala D-ala ligase C-terminus JAV55_20775 PF01116 Fructose-bisphosphate aldolase class-II JAV55_20780 PF01261 Xylose isomerase-like TIM barrel JAV55_20785 PF01261 Xylose isomerase-like TIM barrel JAV55_20790 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JAV55_20790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JAV55_20795 PF07690 Major Facilitator Superfamily JAV55_20800 PF01261 Xylose isomerase-like TIM barrel JAV55_20805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JAV55_20805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JAV55_20805 PF00205 Thiamine pyrophosphate enzyme, central domain JAV55_20810 PF00294 pfkB family carbohydrate kinase JAV55_20815 PF04962 KduI/IolB family JAV55_20820 PF00171 Aldehyde dehydrogenase family JAV55_20825 PF00455 DeoR C terminal sensor domain JAV55_20825 PF08220 DeoR-like helix-turn-helix domain JAV55_20830 PF00248 Aldo/keto reductase family JAV55_20835 PF03009 Glycerophosphoryl diester phosphodiesterase family JAV55_20840 PF07690 Major Facilitator Superfamily JAV55_20845 PF00183 Hsp90 protein JAV55_20850 PF12848 ABC transporter JAV55_20850 PF00005 ABC transporter JAV55_20875 PF01497 Periplasmic binding protein JAV55_20895 PF02421 Ferrous iron transport protein B JAV55_20895 PF17910 FeoB cytosolic helical domain JAV55_20895 PF07664 Ferrous iron transport protein B C terminus JAV55_20895 PF07670 Nucleoside recognition JAV55_20905 PF01757 Acyltransferase family JAV55_20910 PF02687 FtsX-like permease family JAV55_20915 PF00005 ABC transporter JAV55_20920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_20925 PF00072 Response regulator receiver domain JAV55_20925 PF00486 Transcriptional regulatory protein, C terminal JAV55_20935 PF00672 HAMP domain JAV55_20935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JAV55_20935 PF05227 CHASE3 domain JAV55_20940 PF01235 Sodium:alanine symporter family JAV55_20945 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JAV55_20945 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JAV55_20950 PF07745 Glycosyl hydrolase family 53 JAV55_20955 PF08532 Beta-galactosidase trimerisation domain JAV55_20955 PF08533 Beta-galactosidase C-terminal domain JAV55_20955 PF02449 Beta-galactosidase JAV55_20960 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_20965 PF00528 Binding-protein-dependent transport system inner membrane component JAV55_20970 PF13416 Bacterial extracellular solute-binding protein JAV55_20975 PF00356 Bacterial regulatory proteins, lacI family JAV55_20980 PF10509 Galactokinase galactose-binding signature JAV55_20980 PF00288 GHMP kinases N terminal domain JAV55_20980 PF08544 GHMP kinases C terminal JAV55_20985 PF16363 GDP-mannose 4,6 dehydratase JAV55_20990 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JAV55_20990 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JAV55_20995 PF00480 ROK family JAV55_20995 PF01325 Iron dependent repressor, N-terminal DNA binding domain JAV55_21000 PF07729 FCD domain JAV55_21000 PF00392 Bacterial regulatory proteins, gntR family JAV55_21005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JAV55_21005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JAV55_21010 PF02447 GntP family permease JAV55_21015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JAV55_21015 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JAV55_21020 PF00465 Iron-containing alcohol dehydrogenase JAV55_21020 PF00171 Aldehyde dehydrogenase family JAV55_21025 PF00578 AhpC/TSA family JAV55_21030 PF07992 Pyridine nucleotide-disulphide oxidoreductase JAV55_21030 PF13192 Thioredoxin domain JAV55_21055 PF00005 ABC transporter JAV55_21065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_21065 PF07730 Histidine kinase JAV55_21070 PF00196 Bacterial regulatory proteins, luxR family JAV55_21070 PF00072 Response regulator receiver domain JAV55_21085 PF00005 ABC transporter JAV55_21085 PF00027 Cyclic nucleotide-binding domain JAV55_21100 PF02590 Predicted SPOUT methyltransferase JAV55_21105 PF14116 YyzF-like protein JAV55_21115 PF00583 Acetyltransferase (GNAT) family JAV55_21130 PF13180 PDZ domain JAV55_21135 PF00753 Metallo-beta-lactamase superfamily JAV55_21140 PF09648 YycH protein JAV55_21145 PF07435 YycH protein JAV55_21150 PF00512 His Kinase A (phospho-acceptor) domain JAV55_21150 PF00672 HAMP domain JAV55_21150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JAV55_21150 PF13426 PAS domain JAV55_21155 PF00072 Response regulator receiver domain JAV55_21155 PF00486 Transcriptional regulatory protein, C terminal JAV55_21180 PF00293 NUDIX domain JAV55_21185 PF00709 Adenylosuccinate synthetase JAV55_21195 PF00772 DnaB-like helicase N terminal domain JAV55_21195 PF03796 DnaB-like helicase C terminal domain JAV55_21200 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) JAV55_21210 PF14174 YycC-like protein JAV55_21215 PF07690 Major Facilitator Superfamily JAV55_21220 PF01979 Amidohydrolase family JAV55_21225 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JAV55_21230 PF00392 Bacterial regulatory proteins, gntR family JAV55_21230 PF07702 UTRA domain JAV55_21235 PF01380 SIS domain JAV55_21240 PF02378 Phosphotransferase system, EIIC JAV55_21240 PF00367 phosphotransferase system, EIIB JAV55_21245 PF03948 Ribosomal protein L9, C-terminal domain JAV55_21245 PF01281 Ribosomal protein L9, N-terminal domain JAV55_21250 PF01368 DHH family JAV55_21250 PF02272 DHHA1 domain JAV55_21255 PF09991 Predicted membrane protein (DUF2232) JAV55_21265 PF07875 Coat F domain JAV55_21270 PF00582 Universal stress protein family JAV55_21275 PF01740 STAS domain JAV55_21275 PF00916 Sulfate permease family JAV55_21280 PF07690 Major Facilitator Superfamily JAV55_21285 PF01084 Ribosomal protein S18 JAV55_21290 PF00436 Single-strand binding protein family JAV55_21295 PF01250 Ribosomal protein S6 JAV55_21300 PF01926 50S ribosome-binding GTPase JAV55_21300 PF06071 Protein of unknown function (DUF933) JAV55_21305 PF06107 Bacterial protein of unknown function (DUF951) JAV55_21315 PF06866 Protein of unknown function (DUF1256) JAV55_21320 PF17762 HTH domain found in ParB protein JAV55_21320 PF02195 ParB-like nuclease domain JAV55_21325 PF13614 AAA domain JAV55_21330 PF02627 Carboxymuconolactone decarboxylase family JAV55_21340 PF02195 ParB-like nuclease domain JAV55_21340 PF17762 HTH domain found in ParB protein JAV55_21345 PF02527 rRNA small subunit methyltransferase G JAV55_21350 PF01134 Glucose inhibited division protein A JAV55_21350 PF13932 GidA associated domain JAV55_21355 PF01926 50S ribosome-binding GTPase JAV55_21355 PF12631 MnmE helical domain JAV55_21355 PF10396 GTP-binding protein TrmE N-terminus JAV55_21360 PF14804 Jag N-terminus JAV55_21360 PF01424 R3H domain JAV55_21365 PF02096 60Kd inner membrane protein JAV55_21370 PF00825 Ribonuclease P JAV55_21375 PF00468 Ribosomal protein L34