locus-tag	class	description
AB684_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AB684_00010	COG0592	DNA-directed DNA polymerase activity
AB684_00015	COG2501	S4 domain
AB684_00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AB684_00030	COG0187	DNA topoisomerase II activity
AB684_00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AB684_00070	COG0517	IMP dehydrogenase activity
AB684_00070	COG0516	GMP reductase activity
AB684_00075	COG1686	Belongs to the peptidase S11 family
AB684_00080	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
AB684_00085	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
AB684_00090	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AB684_00095	COG1929	Belongs to the glycerate kinase type-1 family
AB684_00100	COG2610	gluconate transmembrane transporter activity
AB684_00105	COG3835	regulator
AB684_00120	COG1428	Deoxynucleoside kinase
AB684_00125	COG1428	Deoxynucleoside kinase
AB684_00130	COG3858	chitin binding
AB684_00130	COG1388	LysM domain
AB684_00135	COG1335	isochorismatase
AB684_00140	COG0590	tRNA wobble adenosine to inosine editing
AB684_00150	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AB684_00155	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AB684_00160	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AB684_00200	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
AB684_00205	COG3853	Toxic anion resistance protein (TelA)
AB684_00210	COG1982	Orn Lys Arg decarboxylase major
AB684_00215	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AB684_00220	COG3870	Protein conserved in bacteria
AB684_00225	COG1728	Protein conserved in bacteria
AB684_00230	COG0470	DNA polymerase III
AB684_00235	COG1774	PSP1 C-terminal conserved region
AB684_00240	COG4467	Involved in initiation control of chromosome replication
AB684_00245	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
AB684_00250	COG2827	Endonuclease containing a URI domain
AB684_00255	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AB684_00260	COG2002	toxin-antitoxin pair type II binding
AB684_00265	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AB684_00265	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AB684_00270	COG0084	hydrolase, TatD family'
AB684_00275	COG3583	domain protein
AB684_00275	COG3584	3D domain protein
AB684_00280	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AB684_00285	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AB684_00295	COG4466	Protein conserved in bacteria
AB684_00305	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AB684_00310	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AB684_00315	COG0251	oxidation-reduction process
AB684_00320	COG2088	sporulation resulting in formation of a cellular spore
AB684_00325	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AB684_00330	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AB684_00335	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
AB684_00340	COG0193	aminoacyl-tRNA hydrolase activity
AB684_00350	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AB684_00355	COG2002	toxin-antitoxin pair type II binding
AB684_00360	COG2244	polysaccharide biosynthetic process
AB684_00365	COG3956	TIGRFAM MazG family protein
AB684_00370	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AB684_00385	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
AB684_00390	COG1098	S1 RNA binding domain
AB684_00405	COG2208	phosphoserine phosphatase activity
AB684_00410	COG2304	oxidoreductase activity
AB684_00415	COG0515	serine threonine protein kinase
AB684_00420	COG0037	tRNA processing
AB684_00430	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AB684_00435	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
AB684_00440	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AB684_00445	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AB684_00450	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AB684_00460	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AB684_00465	COG0512	Glutamine amidotransferase of anthranilate synthase
AB684_00470	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AB684_00475	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AB684_00480	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AB684_00485	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AB684_00490	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AB684_00495	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AB684_00575	COG4463	regulation of RNA biosynthetic process
AB684_00580	COG3880	PFAM UvrB UvrC protein
AB684_00585	COG3869	Catalyzes the specific phosphorylation of arginine residues in
AB684_00590	COG0542	response to heat
AB684_00595	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AB684_00600	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
AB684_00605	COG4956	integral membrane protein (PIN domain superfamily)
AB684_00610	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
AB684_00615	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
AB684_00620	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AB684_00625	COG1045	serine acetyltransferase
AB684_00630	COG0215	cysteine-tRNA ligase activity
AB684_00635	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
AB684_00640	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AB684_00645	COG3688	RNA-binding protein containing a PIN domain
AB684_00660	COG0250	Participates in transcription elongation, termination and antitermination
AB684_00665	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AB684_00670	COG0081	regulation of translation
AB684_00675	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AB684_00680	COG0222	ribosome binding
AB684_00685	COG2813	Specifically methylates the guanine in position
AB684_00690	COG0085	RNA polymerase activity
AB684_00695	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AB684_00700	COG1358	cellular component organization or biogenesis
AB684_00705	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AB684_00710	COG0049	tRNA binding
AB684_00715	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AB684_00720	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AB684_00725	COG0051	transcription antitermination factor activity, RNA binding
AB684_00730	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AB684_00735	COG0088	Forms part of the polypeptide exit tunnel
AB684_00740	COG0089	rRNA binding
AB684_00745	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AB684_00750	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AB684_00755	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AB684_00760	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AB684_00765	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AB684_00770	COG0255	Belongs to the universal ribosomal protein uL29 family
AB684_00775	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AB684_00780	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AB684_00785	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AB684_00790	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AB684_00795	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AB684_00800	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AB684_00805	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AB684_00810	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AB684_00815	COG1841	ribosomal large subunit assembly
AB684_00820	COG0200	Binds to the 23S rRNA
AB684_00825	COG0201	protein transport
AB684_00830	COG0563	adenylate kinase activity
AB684_00835	COG0024	Methionine aminopeptidase
AB684_00840	COG2163	COG2163 Ribosomal protein L14E L6E L27E
AB684_00845	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AB684_00850	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AB684_00855	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AB684_00860	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AB684_00865	COG0202	RNA polymerase activity
AB684_00870	COG0203	ribosomal protein L17
AB684_00875	COG1122	ATPase activity
AB684_00880	COG1122	ATPase activity
AB684_00885	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AB684_00890	COG0101	tRNA pseudouridine synthase activity
AB684_00895	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AB684_00900	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AB684_00905	COG2318	DinB family
AB684_00915	COG0860	N-Acetylmuramoyl-L-alanine amidase
AB684_00920	COG0489	protein tyrosine kinase activity
AB684_00930	COG2194	sulfuric ester hydrolase activity
AB684_00935	COG0726	polysaccharide deacetylase
AB684_00965	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AB684_00975	COG0385	Bile acid
AB684_00990	COG3876	Protein conserved in bacteria
AB684_00995	COG1472	Belongs to the glycosyl hydrolase 3 family
AB684_01000	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AB684_01005	COG1263	PTS System
AB684_01005	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_01010	COG1737	Transcriptional regulator
AB684_01015	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
AB684_01020	COG1683	Conserved Protein
AB684_01055	COG1595	DNA-templated transcription, initiation
AB684_01060	COG5662	AntiSigma factor
AB684_01065	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
AB684_01070	COG4856	YbbR-like protein
AB684_01075	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AB684_01080	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AB684_01100	COG1725	Transcriptional regulator
AB684_01105	COG0640	Transcriptional regulator
AB684_01110	COG2814	Major facilitator Superfamily
AB684_01120	COG1132	(ABC) transporter
AB684_01125	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
AB684_01150	COG1011	Hydrolase
AB684_01155	COG1113	amino acid transport
AB684_01160	COG2851	Citrate transporter
AB684_01165	COG3181	Tripartite tricarboxylate transporter family receptor
AB684_01170	COG4565	transcriptional regulatory protein
AB684_01175	COG3290	protein histidine kinase activity
AB684_01190	COG2211	Major facilitator Superfamily
AB684_01210	COG1331	Highly conserved protein containing a thioredoxin domain
AB684_01215	COG3677	Transposase
AB684_01240	COG0477	Major facilitator Superfamily
AB684_01260	COG1283	sodium-dependent phosphate transmembrane transporter activity
AB684_01265	COG4682	membrane
AB684_01290	COG0697	spore germination
AB684_01295	COG2207	Transcriptional regulator
AB684_01295	COG1917	Cupin 2, conserved barrel domain protein
AB684_01315	COG0371	Dehydrogenase
AB684_01320	COG0840	transmembrane signaling receptor activity
AB684_01325	COG4213	ABC transporter substrate-binding protein
AB684_01340	COG4257	antibiotic catabolic process
AB684_01350	COG0833	amino acid
AB684_01355	COG2040	homocysteine
AB684_01365	COG2190	(PTS) system
AB684_01365	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_01365	COG1263	PTS System
AB684_01370	COG0789	Transcriptional regulator
AB684_01375	COG2323	membrane
AB684_01390	COG2205	protein histidine kinase activity
AB684_01395	COG1115	amino acid carrier protein
AB684_01400	COG2066	Belongs to the glutaminase family
AB684_01405	COG4191	Histidine kinase
AB684_01410	COG0784	Response regulator, receiver
AB684_01435	COG3540	Alkaline phosphatase
AB684_01440	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AB684_01445	COG0805	protein transport
AB684_01450	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AB684_01455	COG1012	belongs to the aldehyde dehydrogenase family
AB684_01460	COG2271	Major facilitator Superfamily
AB684_01465	COG4948	Mandelate Racemase Muconate Lactonizing
AB684_01470	COG2186	Transcriptional regulator
AB684_01475	COG2721	sulfolactate sulfo-lyase activity
AB684_01480	COG0745	RESPONSE REGULATOR receiver
AB684_01485	COG2205	protein histidine kinase activity
AB684_01490	COG1131	(ABC) transporter
AB684_01515	COG3173	Aminoglycoside phosphotransferase
AB684_01520	COG1846	Transcriptional regulator
AB684_01525	COG0318	PFAM AMP-dependent synthetase and ligase
AB684_01545	COG0789	Transcriptional regulator
AB684_01570	COG0697	spore germination
AB684_01575	COG1714	RDD family
AB684_01580	COG1405	negative regulation of cell septum assembly
AB684_01580	COG3012	SEC-C Motif Domain Protein
AB684_01610	COG0583	DNA-binding transcription factor activity
AB684_01615	COG1942	4-Oxalocrotonate Tautomerase
AB684_01620	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_01635	COG1288	antiporter activity
AB684_01645	COG0456	acetyltransferase
AB684_01655	COG1164	Oligoendopeptidase f
AB684_01660	COG2261	transglycosylase associated protein
AB684_01670	COG0247	lactate metabolic process
AB684_01675	COG0277	FAD linked oxidase domain protein
AB684_01680	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AB684_01685	COG1447	Phosphotransferase system cellobiose-specific component IIA
AB684_01690	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AB684_01695	COG1486	melibiose metabolic process
AB684_01705	COG3394	polysaccharide catabolic process
AB684_01720	COG3591	Belongs to the peptidase S1B family
AB684_01725	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_01735	COG1595	DNA-templated transcription, initiation
AB684_01745	COG3773	Cell wall hydrolase
AB684_01750	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AB684_01755	COG3883	PFAM NLP P60 protein
AB684_01755	COG0791	NLP P60 protein
AB684_01765	COG1131	(ABC) transporter
AB684_01770	COG1309	transcriptional regulator
AB684_01790	COG2310	stress, protein
AB684_01795	COG2310	stress, protein
AB684_01800	COG2310	stress, protein
AB684_01805	COG0861	Integral membrane protein TerC family
AB684_01825	COG3853	Toxic anion resistance protein (TelA)
AB684_01830	COG0785	Cytochrome C biogenesis protein
AB684_01840	COG0789	Transcriptional regulator
AB684_01845	COG2223	nitrite transmembrane transporter activity
AB684_01850	COG0039	L-malate dehydrogenase activity
AB684_01855	COG1620	l-lactate permease
AB684_01860	COG1280	lysine exporter protein (LysE YggA)
AB684_01865	COG1113	amino acid transport
AB684_01870	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AB684_01875	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AB684_01880	COG3541	Predicted nucleotidyltransferase
AB684_01885	COG0506	proline dehydrogenase activity
AB684_01890	COG1012	belongs to the aldehyde dehydrogenase family
AB684_01895	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AB684_01900	COG2508	Transcriptional regulator
AB684_01905	COG3689	TIGRFAM TIGR03943 family protein
AB684_01910	COG0701	Predicted permease
AB684_01915	COG3458	cephalosporin-C deacetylase activity
AB684_01935	COG0765	amino acid transport
AB684_01940	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AB684_01945	COG2249	NAD(P)H dehydrogenase (quinone) activity
AB684_01955	COG2723	6-phospho-beta-galactosidase activity
AB684_01965	COG3209	COG3209 Rhs family protein
AB684_01970	COG3266	domain, Protein
AB684_01970	COG0515	serine threonine protein kinase
AB684_01980	COG5444	nuclease activity
AB684_02005	COG1176	ABC-type spermidine putrescine transport system, permease component I
AB684_02010	COG1177	transmembrane transport
AB684_02015	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AB684_02020	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AB684_02025	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AB684_02030	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
AB684_02035	COG0697	spore germination
AB684_02040	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AB684_02050	COG2819	hydrolase of the alpha beta superfamily
AB684_02055	COG2207	Transcriptional regulator
AB684_02055	COG3708	Transcriptional regulator
AB684_02060	COG2364	Membrane
AB684_02070	COG1131	(ABC) transporter
AB684_02095	COG1126	abc transporter atp-binding protein
AB684_02100	COG0765	amino acid transport
AB684_02105	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AB684_02110	COG3829	transcription factor binding
AB684_02115	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AB684_02120	COG0833	amino acid
AB684_02125	COG0010	Belongs to the arginase family
AB684_02130	COG0583	DNA-binding transcription factor activity
AB684_02135	COG0163	prenyltransferase activity
AB684_02140	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AB684_02190	COG5444	nuclease activity
AB684_02210	COG2972	Histidine kinase
AB684_02215	COG2207	Transcriptional regulator
AB684_02215	COG4753	response regulator
AB684_02220	COG4213	ABC transporter substrate-binding protein
AB684_02230	COG4214	carbohydrate transport
AB684_02235	COG2271	Major facilitator Superfamily
AB684_02240	COG1846	Transcriptional regulator
AB684_02240	COG0456	acetyltransferase
AB684_02250	COG4247	3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
AB684_02255	COG3104	oligopeptide transport
AB684_02260	COG5434	Belongs to the glycosyl hydrolase 28 family
AB684_02270	COG0697	spore germination
AB684_02280	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
AB684_02285	COG0789	Transcriptional regulator
AB684_02290	COG1136	(ABC) transporter
AB684_02295	COG0577	efflux transmembrane transporter activity
AB684_02300	COG0745	RESPONSE REGULATOR receiver
AB684_02305	COG3850	Histidine kinase
AB684_02305	COG5002	protein histidine kinase activity
AB684_02310	COG0840	transmembrane signaling receptor activity
AB684_02315	COG0527	aspartate kinase activity
AB684_02320	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_02325	COG4605	iron ion homeostasis
AB684_02330	COG4604	ABC transporter, ATP-binding protein
AB684_02335	COG4607	ABC-type enterochelin transport system periplasmic component
AB684_02340	COG2814	Major facilitator Superfamily
AB684_02345	COG1309	transcriptional regulator
AB684_02355	COG0778	Nitroreductase
AB684_02360	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AB684_02365	COG0640	Transcriptional regulator
AB684_02370	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AB684_02375	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AB684_02380	COG0531	amino acid
AB684_02385	COG1012	belongs to the aldehyde dehydrogenase family
AB684_02390	COG0697	spore germination
AB684_02400	COG4549	nuclear export factor GLE1
AB684_02405	COG2372	response to copper ion
AB684_02405	COG1276	copper resistance
AB684_02410	COG1349	DNA-binding transcription factor activity
AB684_02415	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AB684_02420	COG0243	molybdopterin cofactor binding
AB684_02425	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AB684_02430	COG2146	nitrite reductase [NAD(P)H] activity
AB684_02435	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AB684_02435	COG1587	Uroporphyrinogen-III synthase
AB684_02440	COG1802	Transcriptional regulator
AB684_02445	COG0471	metal ion transport
AB684_02450	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AB684_02455	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AB684_02470	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_02485	COG3959	Transketolase, thiamine diphosphate binding domain
AB684_02490	COG3958	Transketolase
AB684_02495	COG0561	phosphatase activity
AB684_02500	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
AB684_02505	COG1914	H( )-stimulated, divalent metal cation uptake system
AB684_02510	COG4336	lyase activity
AB684_02515	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AB684_02520	COG1984	allophanate hydrolase subunit 2
AB684_02525	COG1414	Transcriptional regulator
AB684_02530	COG2755	lipolytic protein G-D-S-L family
AB684_02535	COG2213	PTS system mannitol-specific
AB684_02540	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_02545	COG0246	Mannitol dehydrogenase
AB684_02550	COG3711	transcriptional antiterminator
AB684_02555	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_02560	COG1917	Cupin 2, conserved barrel domain protein
AB684_02570	COG3871	stress protein (general stress protein 26)
AB684_02580	COG1316	TRANSCRIPTIONal
AB684_02585	COG2814	Major facilitator Superfamily
AB684_02595	COG1522	sequence-specific DNA binding
AB684_02600	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AB684_02600	COG0551	DNA topoisomerase type I activity
AB684_02605	COG0531	amino acid
AB684_02610	COG0028	Belongs to the TPP enzyme family
AB684_02615	COG3397	chitin binding
AB684_02625	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AB684_02630	COG1914	H( )-stimulated, divalent metal cation uptake system
AB684_02635	COG2261	transglycosylase associated protein
AB684_02640	COG1027	Aspartate ammonia-lyase
AB684_02645	COG1819	glycosyl
AB684_02650	COG4876	unkown
AB684_02655	COG2217	Heavy metal translocating P-type atpase
AB684_02665	COG0662	Cupin 2, conserved barrel domain protein
AB684_02670	COG3729	General stress protein
AB684_02675	COG0628	permease
AB684_02680	COG1301	dicarboxylic acid transport
AB684_02685	COG1131	(ABC) transporter
AB684_02690	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
AB684_02700	COG1960	acyl-CoA dehydrogenase activity
AB684_02715	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_02720	COG1181	Belongs to the D-alanine--D-alanine ligase family
AB684_02725	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AB684_02735	COG0513	Belongs to the DEAD box helicase family
AB684_02740	COG3402	PFAM membrane-flanked domain
AB684_02745	COG3428	Bacterial PH domain
AB684_02750	COG0705	Rhomboid family
AB684_02755	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
AB684_02760	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AB684_02765	COG0864	Transcriptional regulator
AB684_02770	COG2337	Toxic component of a toxin-antitoxin (TA) module
AB684_02775	COG1366	Belongs to the anti-sigma-factor antagonist family
AB684_02780	COG1366	Belongs to the anti-sigma-factor antagonist family
AB684_02785	COG2172	sigma factor antagonist activity
AB684_02790	COG2208	phosphoserine phosphatase activity
AB684_02800	COG2172	sigma factor antagonist activity
AB684_02805	COG1191	sigma factor activity
AB684_02810	COG2208	phosphoserine phosphatase activity
AB684_02815	COG2183	response to ionizing radiation
AB684_02820	COG1309	transcriptional regulator
AB684_02825	COG2409	Drug exporters of the RND superfamily
AB684_02825	COG1033	growth of symbiont in host cell
AB684_02830	COG3091	SprT-like family
AB684_02880	COG1476	TRANSCRIPTIONal
AB684_02885	COG3239	Fatty acid desaturase
AB684_02890	COG1278	Cold shock
AB684_02905	COG2364	Membrane
AB684_02910	COG1846	Transcriptional regulator
AB684_02915	COG0456	acetyltransferase
AB684_02920	COG2808	Putative FMN-binding domain
AB684_02930	COG1733	regulation of RNA biosynthetic process
AB684_02935	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AB684_02945	COG0583	DNA-binding transcription factor activity
AB684_02960	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
AB684_02965	COG1113	amino acid transport
AB684_02980	COG1595	DNA-templated transcription, initiation
AB684_02990	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AB684_02990	COG2755	lipolytic protein G-D-S-L family
AB684_02995	COG2814	Major facilitator Superfamily
AB684_03005	COG3279	Response regulator of the LytR AlgR family
AB684_03015	COG3764	Sortase (surface protein transpeptidase)
AB684_03020	COG2814	Major facilitator Superfamily
AB684_03060	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AB684_03065	COG0802	atpase or kinase
AB684_03070	COG1214	PFAM Peptidase M22, glycoprotease
AB684_03075	COG0456	acetyltransferase
AB684_03080	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AB684_03085	COG0488	(ABC) transporter
AB684_03090	COG0315	cyclic pyranopterin monophosphate synthase activity
AB684_03095	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
AB684_03100	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AB684_03105	COG0805	protein transport
AB684_03115	COG1266	CAAX protease self-immunity
AB684_03120	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AB684_03125	COG0459	protein refolding
AB684_03155	COG2720	vancomycin resistance protein
AB684_03170	COG2135	peptidase activity
AB684_03180	COG1309	transcriptional regulator
AB684_03185	COG3848	Pyruvate phosphate dikinase
AB684_03185	COG0574	Belongs to the PEP-utilizing enzyme family
AB684_03195	COG3189	MarR family transcriptional regulator
AB684_03200	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
AB684_03205	COG2272	Belongs to the type-B carboxylesterase lipase family
AB684_03210	COG2814	Major facilitator Superfamily
AB684_03215	COG1842	Phage shock protein A
AB684_03220	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AB684_03225	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
AB684_03230	COG4260	virion core protein, lumpy skin disease virus
AB684_03240	COG1378	Sugar-specific transcriptional regulator TrmB
AB684_03245	COG1280	lysine exporter protein (LysE YggA)
AB684_03250	COG3339	Conserved Protein
AB684_03255	COG0772	Belongs to the SEDS family
AB684_03285	COG0726	polysaccharide deacetylase
AB684_03295	COG1609	Transcriptional regulator
AB684_03300	COG0366	Alpha amylase catalytic
AB684_03305	COG2182	Extracellular solute-binding protein
AB684_03310	COG1175	transmembrane transport
AB684_03315	COG3833	ABC-type maltose transport systems, permease component
AB684_03320	COG5521	maltodextrose utilization protein MalA
AB684_03325	COG1554	hydrolase, family 65, central catalytic
AB684_03330	COG0366	Alpha amylase catalytic
AB684_03335	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AB684_03340	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AB684_03345	COG1846	Transcriptional regulator
AB684_03360	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AB684_03365	COG0823	Involved in the tonB-independent uptake of proteins
AB684_03395	COG2801	Transposase and inactivated derivatives
AB684_03405	COG0702	epimerase
AB684_03415	COG2132	Multicopper oxidase
AB684_03430	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AB684_03435	COG0714	Associated with various cellular activities
AB684_03440	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
AB684_03445	COG1305	Transglutaminase-like
AB684_03450	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AB684_03450	COG0519	Catalyzes the synthesis of GMP from XMP
AB684_03455	COG2252	PERMEase
AB684_03470	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
AB684_03480	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AB684_03485	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AB684_03490	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AB684_03495	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AB684_03500	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AB684_03505	COG0047	phosphoribosylformylglycinamidine synthase activity
AB684_03510	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AB684_03515	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AB684_03520	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
AB684_03525	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AB684_03530	COG0138	bifunctional purine biosynthesis protein purh
AB684_03535	COG0151	Belongs to the GarS family
AB684_03550	COG2124	cytochrome p450
AB684_03570	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AB684_03575	COG1470	cell adhesion involved in biofilm formation
AB684_03580	COG4496	protein, YerC YecD
AB684_03585	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
AB684_03590	COG0210	DNA helicase
AB684_03595	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AB684_03600	COG4851	CamS sex pheromone cAM373 precursor
AB684_03610	COG2188	Transcriptional regulator
AB684_03630	COG1735	metal-dependent hydrolase with the TIM-barrel fold
AB684_03635	COG0626	cystathionine gamma-synthase activity
AB684_03640	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AB684_03645	COG3457	Alanine racemase
AB684_03650	COG0363	glucosamine-6-phosphate deaminase activity
AB684_03655	COG1285	pathogenesis
AB684_03660	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AB684_03665	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AB684_03670	COG0154	amidase activity
AB684_03675	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AB684_03690	COG4124	Belongs to the glycosyl hydrolase 26 family
AB684_03695	COG1309	transcriptional regulator
AB684_03700	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AB684_03710	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AB684_03715	COG1957	nucleoside hydrolase
AB684_03720	COG1597	lipid kinase activity
AB684_03725	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AB684_03735	COG1263	PTS System
AB684_03735	COG2190	(PTS) system
AB684_03735	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_03740	COG2723	6-phospho-beta-galactosidase activity
AB684_03745	COG3711	transcriptional antiterminator
AB684_03750	COG0457	Tetratricopeptide repeat
AB684_03770	COG0217	transcriptional regulatory protein
AB684_03785	COG1012	belongs to the aldehyde dehydrogenase family
AB684_03790	COG0840	transmembrane signaling receptor activity
AB684_03795	COG0471	metal ion transport
AB684_03800	COG0488	(ABC) transporter
AB684_03805	COG1469	GTP cyclohydrolase I activity
AB684_03820	COG0523	cobalamin synthesis protein
AB684_03825	COG1424	Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
AB684_03830	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AB684_03835	COG0156	8-amino-7-oxononanoate synthase activity
AB684_03840	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AB684_03845	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
AB684_03850	COG2124	cytochrome p450
AB684_03860	COG0789	Transcriptional regulator
AB684_03865	COG2814	Major facilitator Superfamily
AB684_03870	COG0488	(ABC) transporter
AB684_03875	COG0513	Belongs to the DEAD box helicase family
AB684_03880	COG2130	NADP-dependent
AB684_03895	COG0471	metal ion transport
AB684_03915	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AB684_03925	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
AB684_03930	COG5658	integral membrane protein
AB684_03935	COG0640	Transcriptional regulator
AB684_03940	COG1254	Belongs to the acylphosphatase family
AB684_03945	COG2258	MOSC domain
AB684_03950	COG0024	Methionine aminopeptidase
AB684_03955	COG1368	sulfuric ester hydrolase activity
AB684_03965	COG1115	amino acid carrier protein
AB684_03970	COG1263	PTS System
AB684_03970	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_03975	COG0366	Alpha amylase catalytic
AB684_03980	COG2188	Transcriptional regulator
AB684_04005	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AB684_04010	COG1045	serine acetyltransferase
AB684_04015	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AB684_04025	COG1215	transferase activity, transferring glycosyl groups
AB684_04030	COG0457	Tetratricopeptide repeat
AB684_04030	COG0463	Glycosyl transferase, family 2
AB684_04040	COG0673	inositol 2-dehydrogenase activity
AB684_04055	COG1733	regulation of RNA biosynthetic process
AB684_04060	COG0778	Nitroreductase
AB684_04065	COG0737	Belongs to the 5'-nucleotidase family
AB684_04070	COG0693	protein deglycase activity
AB684_04075	COG4840	Belongs to the UPF0435 family
AB684_04080	COG1115	amino acid carrier protein
AB684_04085	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AB684_04090	COG4980	gas vesicle protein
AB684_04095	COG1295	ribonuclease BN
AB684_04100	COG0477	Major facilitator Superfamily
AB684_04110	COG0387	Pfam Sodium calcium exchanger
AB684_04120	COG0535	radical SAM domain protein
AB684_04130	COG0726	polysaccharide deacetylase
AB684_04135	COG0371	Dehydrogenase
AB684_04145	COG0598	Magnesium transport protein CorA
AB684_04150	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
AB684_04155	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AB684_04160	COG4637	Psort location Cytoplasmic, score
AB684_04185	COG1819	glycosyl
AB684_04195	COG0477	Major facilitator Superfamily
AB684_04200	COG1263	PTS System
AB684_04200	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_04205	COG3711	transcriptional antiterminator
AB684_04210	COG0288	reversible hydration of carbon dioxide
AB684_04215	COG3002	Belongs to the UPF0753 family
AB684_04220	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AB684_04225	COG5609	conserved protein (DUF2294)
AB684_04235	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AB684_04240	COG0022	dehydrogenase e1 component
AB684_04245	COG0508	dehydrogenase complex catalyzes the overall conversion of
AB684_04250	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AB684_04255	COG3284	Transcriptional regulator
AB684_04260	COG1742	UPF0060 membrane protein
AB684_04265	COG1486	melibiose metabolic process
AB684_04270	COG1737	Transcriptional regulator
AB684_04275	COG1263	PTS System
AB684_04275	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_04290	COG1733	regulation of RNA biosynthetic process
AB684_04295	COG2259	Doxx family
AB684_04300	COG2514	catechol 2,3-dioxygenase activity
AB684_04310	COG3507	Belongs to the glycosyl hydrolase 43 family
AB684_04315	COG1917	Cupin 2, conserved barrel domain protein
AB684_04315	COG2207	Transcriptional regulator
AB684_04320	COG1653	transport
AB684_04325	COG2249	NAD(P)H dehydrogenase (quinone) activity
AB684_04330	COG1051	belongs to the nudix hydrolase family
AB684_04340	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AB684_04340	COG0392	lysyltransferase activity
AB684_04345	COG0384	phenazine biosynthesis protein PhzF
AB684_04350	COG0778	Nitroreductase
AB684_04365	COG1090	epimerase
AB684_04370	COG2137	regulation of response to DNA damage stimulus
AB684_04395	COG0463	Glycosyl transferase, family 2
AB684_04405	COG4485	Bacterial membrane protein, YfhO
AB684_04410	COG1988	membrane-bound metal-dependent
AB684_04415	COG1194	a g-specific adenine glycosylase
AB684_04425	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_04440	COG3557	Belongs to the UPF0374 family
AB684_04445	COG1132	(ABC) transporter
AB684_04450	COG0444	Belongs to the ABC transporter superfamily
AB684_04455	COG4608	Belongs to the ABC transporter superfamily
AB684_04460	COG0747	negative chemotaxis
AB684_04475	COG4129	membrane
AB684_04480	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AB684_04485	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AB684_04490	COG0735	belongs to the Fur family
AB684_04600	COG4974	Belongs to the 'phage' integrase family
AB684_04610	COG0582	viral genome integration into host DNA
AB684_04730	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AB684_04740	COG0710	3-dehydroquinate dehydratase activity
AB684_04745	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
AB684_04750	COG1116	anion transmembrane transporter activity
AB684_04755	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AB684_04760	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AB684_04765	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AB684_04775	COG1476	TRANSCRIPTIONal
AB684_04785	COG1131	(ABC) transporter
AB684_04805	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AB684_04815	COG3382	B3 4 domain protein
AB684_04820	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AB684_04830	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AB684_04835	COG0789	Transcriptional regulator
AB684_04840	COG1664	Polymer-forming cytoskeletal
AB684_04850	COG2766	serine protein kinase
AB684_04855	COG2718	Belongs to the UPF0229 family
AB684_04860	COG1566	PFAM secretion protein HlyD family protein
AB684_04865	COG2814	Major facilitator Superfamily
AB684_04870	COG0655	NAD(P)H dehydrogenase (quinone) activity
AB684_04890	COG1131	(ABC) transporter
AB684_04895	COG1131	(ABC) transporter
AB684_04900	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
AB684_04905	COG1278	Cold shock
AB684_04910	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AB684_04915	COG2011	ABC-type metal ion transport system permease component
AB684_04920	COG1464	Belongs to the NlpA lipoprotein family
AB684_04925	COG1823	symporter activity
AB684_04950	COG5577	PFAM Coat F domain
AB684_04955	COG5002	protein histidine kinase activity
AB684_04960	COG0737	Belongs to the 5'-nucleotidase family
AB684_04960	COG4085	toxin activity
AB684_04960	COG1525	nuclease
AB684_04965	COG3764	Sortase (surface protein transpeptidase)
AB684_04970	COG0564	pseudouridine synthase activity
AB684_04980	COG0517	IMP dehydrogenase activity
AB684_04985	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AB684_04990	COG3153	acetyltransferase
AB684_04990	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AB684_04995	COG0488	(ABC) transporter
AB684_05000	COG2116	formate transmembrane transporter activity
AB684_05005	COG0679	Auxin Efflux Carrier
AB684_05010	COG0604	alcohol dehydrogenase
AB684_05015	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
AB684_05020	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AB684_05025	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AB684_05030	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AB684_05035	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AB684_05050	COG2203	Gaf domain
AB684_05050	COG4585	Histidine kinase
AB684_05055	COG2197	response regulator
AB684_05060	COG0431	NADPH-dependent FMN reductase
AB684_05075	COG1959	2 iron, 2 sulfur cluster binding
AB684_05080	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AB684_05080	COG1017	nitric oxide dioxygenase activity
AB684_05085	COG2719	SpoVR family
AB684_05090	COG0791	NLP P60 protein
AB684_05090	COG1388	LysM domain
AB684_05100	COG0372	Belongs to the citrate synthase family
AB684_05105	COG2133	pyrroloquinoline quinone binding
AB684_05110	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_05115	COG0733	neurotransmitter:sodium symporter activity
AB684_05125	COG2207	Transcriptional regulator
AB684_05125	COG3708	Transcriptional regulator
AB684_05130	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AB684_05150	COG1595	DNA-templated transcription, initiation
AB684_05155	COG0662	Cupin 2, conserved barrel domain protein
AB684_05165	COG0204	Acyl-transferase
AB684_05170	COG3152	Membrane
AB684_05180	COG1309	transcriptional regulator
AB684_05185	COG1253	flavin adenine dinucleotide binding
AB684_05190	COG0789	Transcriptional regulator
AB684_05195	COG1253	flavin adenine dinucleotide binding
AB684_05215	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AB684_05220	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AB684_05225	COG0584	glycerophosphoryl diester phosphodiesterase
AB684_05230	COG0668	transmembrane transport
AB684_05235	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AB684_05245	COG0726	polysaccharide deacetylase
AB684_05255	COG1757	Na H antiporter
AB684_05260	COG2017	converts alpha-aldose to the beta-anomer
AB684_05280	COG0589	response to stress
AB684_05285	COG1132	(ABC) transporter
AB684_05290	COG1132	(ABC) transporter
AB684_05295	COG0702	epimerase
AB684_05310	COG3842	ATPase activity
AB684_05315	COG2508	Transcriptional regulator
AB684_05325	COG0189	ligase activity
AB684_05330	COG0189	ligase activity
AB684_05335	COG4399	Belongs to the UPF0754 family
AB684_05340	COG3679	Belongs to the UPF0342 family
AB684_05350	COG0561	phosphatase activity
AB684_05355	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AB684_05360	COG0475	glutathione-regulated potassium exporter activity
AB684_05365	COG0490	domain, Protein
AB684_05375	COG1024	Enoyl-CoA hydratase
AB684_05380	COG0457	Tetratricopeptide repeat
AB684_05395	COG4152	abc transporter atp-binding protein
AB684_05400	COG1668	transmembrane transport
AB684_05405	COG0420	3'-5' exonuclease activity
AB684_05415	COG3481	metal-dependent phosphohydrolase, HD sub domain
AB684_05425	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AB684_05445	COG1846	Transcriptional regulator
AB684_05450	COG4980	gas vesicle protein
AB684_05465	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
AB684_05470	COG0537	adenosine 5'-monophosphoramidase activity
AB684_05475	COG1131	(ABC) transporter
AB684_05480	COG4473	ABC transporter
AB684_05490	COG1473	amidohydrolase
AB684_05495	COG3069	C4-dicarboxylate transmembrane transporter activity
AB684_05500	COG2329	Antibiotic biosynthesis monooxygenase
AB684_05505	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AB684_05510	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
AB684_05525	COG1309	transcriptional regulator
AB684_05530	COG1511	domain protein
AB684_05535	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AB684_05540	COG1363	Peptidase, m42
AB684_05550	COG1301	dicarboxylic acid transport
AB684_05555	COG1234	tRNA 3'-trailer cleavage
AB684_05560	COG0095	Lipoate-protein ligase
AB684_05565	COG0318	PFAM AMP-dependent synthetase and ligase
AB684_05575	COG1396	sequence-specific DNA binding
AB684_05590	COG0501	Belongs to the peptidase M48B family
AB684_05600	COG0697	spore germination
AB684_05605	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
AB684_05610	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_05615	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_05620	COG0406	alpha-ribazole phosphatase activity
AB684_05625	COG0840	transmembrane signaling receptor activity
AB684_05630	COG0723	plastoquinol--plastocyanin reductase activity
AB684_05630	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AB684_05635	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_05645	COG4903	ComK protein
AB684_05655	COG0398	Pfam SNARE associated Golgi protein
AB684_05660	COG0681	Belongs to the peptidase S26 family
AB684_05665	COG1404	Belongs to the peptidase S8 family
AB684_05675	COG2508	Transcriptional regulator
AB684_05685	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AB684_05690	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AB684_05695	COG3257	ureidoglycine aminohydrolase activity
AB684_05700	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AB684_05705	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AB684_05710	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AB684_05715	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AB684_05725	COG0549	Belongs to the carbamate kinase family
AB684_05730	COG2814	Major facilitator Superfamily
AB684_05735	COG0457	Tetratricopeptide repeat
AB684_05775	COG1486	melibiose metabolic process
AB684_05780	COG3180	Ammonia monooxygenase
AB684_05795	COG3546	catalase activity
AB684_05800	COG0318	PFAM AMP-dependent synthetase and ligase
AB684_05805	COG2814	Major facilitator Superfamily
AB684_05805	COG0477	Major facilitator Superfamily
AB684_05815	COG5002	protein histidine kinase activity
AB684_05820	COG0745	RESPONSE REGULATOR receiver
AB684_05825	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
AB684_05830	COG0725	ABC transporter, periplasmic molybdate-binding protein
AB684_05835	COG4149	molybdate abc transporter
AB684_05840	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
AB684_05845	COG1074	ATP-dependent DNA helicase activity
AB684_05850	COG0420	3'-5' exonuclease activity
AB684_05855	COG0419	ATPase involved in DNA repair
AB684_05900	COG5337	Spore coat protein CotH
AB684_05910	COG0179	Fumarylacetoacetate (FAA) hydrolase
AB684_05930	COG0367	asparagine synthase
AB684_05940	COG0347	Belongs to the P(II) protein family
AB684_05945	COG0534	Mate efflux family protein
AB684_05950	COG2207	Transcriptional regulator
AB684_05950	COG1917	Cupin 2, conserved barrel domain protein
AB684_05960	COG1609	Transcriptional regulator
AB684_05965	COG0673	inositol 2-dehydrogenase activity
AB684_05980	COG0076	glutamate decarboxylase activity
AB684_06005	COG2153	protein acetylation
AB684_06010	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_06015	COG2378	regulation of single-species biofilm formation
AB684_06020	COG1410	methionine synthase
AB684_06020	COG0646	methionine synthase
AB684_06025	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
AB684_06025	COG0646	methionine synthase
AB684_06030	COG1666	GTP binding
AB684_06035	COG2996	Protein conserved in bacteria
AB684_06045	COG1307	EDD domain protein, DegV family
AB684_06050	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AB684_06060	COG0516	GMP reductase activity
AB684_06070	COG0561	phosphatase activity
AB684_06075	COG1073	alpha beta
AB684_06080	COG2151	metal-sulfur cluster biosynthetic enzyme
AB684_06090	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AB684_06095	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
AB684_06100	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AB684_06105	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AB684_06110	COG0505	Belongs to the CarA family
AB684_06115	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AB684_06120	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AB684_06125	COG1968	undecaprenyl-diphosphatase activity
AB684_06140	COG2267	carboxylic ester hydrolase activity
AB684_06150	COG1744	ABC transporter substrate-binding protein PnrA-like
AB684_06165	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AB684_06170	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AB684_06175	COG5504	Zn-dependent protease
AB684_06180	COG0444	Belongs to the ABC transporter superfamily
AB684_06185	COG4608	Belongs to the ABC transporter superfamily
AB684_06195	COG0601	transmembrane transport
AB684_06200	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AB684_06225	COG0180	Tryptophanyl-tRNA synthetase
AB684_06230	COG4166	transmembrane transport
AB684_06235	COG0601	transmembrane transport
AB684_06240	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AB684_06245	COG0444	Belongs to the ABC transporter superfamily
AB684_06250	COG4608	Belongs to the ABC transporter superfamily
AB684_06255	COG0456	acetyltransferase
AB684_06260	COG1393	Belongs to the ArsC family
AB684_06265	COG0861	Integral membrane protein TerC family
AB684_06270	COG4862	establishment of competence for transformation
AB684_06290	COG4565	transcriptional regulatory protein
AB684_06295	COG3290	protein histidine kinase activity
AB684_06300	COG4469	Competence protein
AB684_06305	COG1164	Oligoendopeptidase f
AB684_06315	COG2346	COG2346, Truncated hemoglobins
AB684_06320	COG0741	lytic transglycosylase activity
AB684_06325	COG4116	CYTH
AB684_06335	COG2357	RelA SpoT domain protein
AB684_06340	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AB684_06345	COG0564	pseudouridine synthase activity
AB684_06350	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AB684_06360	COG0475	glutathione-regulated potassium exporter activity
AB684_06360	COG0569	domain protein
AB684_06365	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AB684_06370	COG0352	thiamine-phosphate diphosphorylase activity
AB684_06380	COG2104	thiamine diphosphate biosynthetic process
AB684_06385	COG2022	thiamine diphosphate biosynthetic process
AB684_06390	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AB684_06395	COG0351	phosphomethylpyrimidine kinase
AB684_06400	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AB684_06455	COG0210	DNA helicase
AB684_06465	COG0586	Pfam SNARE associated Golgi protein
AB684_06470	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AB684_06475	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AB684_06480	COG2246	polysaccharide biosynthetic process
AB684_06485	COG2153	protein acetylation
AB684_06490	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AB684_06495	COG2382	esterase
AB684_06515	COG0626	cystathionine gamma-synthase activity
AB684_06520	COG0626	cystathionine gamma-synthase activity
AB684_06525	COG5505	Protein of unknown function (DUF819)
AB684_06540	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AB684_06545	COG3507	Belongs to the glycosyl hydrolase 43 family
AB684_06565	COG0110	maltose O-acetyltransferase activity
AB684_06575	COG0583	DNA-binding transcription factor activity
AB684_06580	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AB684_06585	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AB684_06590	COG2801	Transposase and inactivated derivatives
AB684_06600	COG0583	DNA-binding transcription factor activity
AB684_06605	COG0697	spore germination
AB684_06610	COG0346	lactoylglutathione lyase activity
AB684_06620	COG3584	3D domain protein
AB684_06620	COG1388	LysM domain
AB684_06625	COG2814	Major facilitator Superfamily
AB684_06630	COG1309	transcriptional regulator
AB684_06650	COG5444	nuclease activity
AB684_06655	COG4195	phage-related replication protein
AB684_06660	COG2856	Zn peptidase
AB684_06665	COG1396	sequence-specific DNA binding
AB684_06680	COG1522	sequence-specific DNA binding
AB684_06685	COG1484	DNA-dependent DNA replication
AB684_06700	COG1595	DNA-templated transcription, initiation
AB684_06705	COG3728	DNA packaging
AB684_06705	COG5484	DNA packaging
AB684_06710	COG1783	phage Terminase large subunit
AB684_06715	COG5518	Phage portal protein
AB684_06720	COG0338	D12 class N6 adenine-specific DNA methyltransferase
AB684_06725	COG4653	Phage capsid family
AB684_06770	COG5412	phage tail tape measure protein
AB684_06770	COG3953	SLT domain
AB684_06775	COG1652	LysM domain
AB684_06780	COG4193	domain, Protein
AB684_06790	COG3628	GPW Gp25 family protein
AB684_06795	COG3299	homolog of phage Mu protein gp47
AB684_06800	COG3778	Protein conserved in bacteria
AB684_06840	COG1802	Transcriptional regulator
AB684_06845	COG1063	alcohol dehydrogenase
AB684_06850	COG1312	Catalyzes the dehydration of D-mannonate
AB684_06855	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_06860	COG1063	alcohol dehydrogenase
AB684_06865	COG2271	Major facilitator Superfamily
AB684_06880	COG0306	phosphate transporter
AB684_06885	COG1392	Phosphate transport regulator
AB684_06890	COG0405	Gamma-glutamyltransferase
AB684_06895	COG5578	integral membrane protein
AB684_06905	COG2207	Transcriptional regulator
AB684_06905	COG4753	response regulator
AB684_06910	COG1653	transport
AB684_06915	COG1175	transmembrane transport
AB684_06920	COG0395	ABC-type sugar transport system, permease component
AB684_06925	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
AB684_06930	COG2207	Transcriptional regulator
AB684_06935	COG2755	lipolytic protein G-D-S-L family
AB684_06945	COG5578	integral membrane protein
AB684_06950	COG3401	FG-GAP repeat protein
AB684_06960	COG2755	lipolytic protein G-D-S-L family
AB684_06965	COG3401	FG-GAP repeat protein
AB684_06970	COG0667	Aldo Keto reductase
AB684_06975	COG2755	lipolytic protein G-D-S-L family
AB684_06980	COG1874	Beta-galactosidase
AB684_06990	COG1653	transport
AB684_06995	COG4209	transmembrane transport
AB684_07000	COG0395	ABC-type sugar transport system, permease component
AB684_07005	COG0531	amino acid
AB684_07010	COG0346	lactoylglutathione lyase activity
AB684_07020	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AB684_07025	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AB684_07030	COG2362	D-Aminopeptidase
AB684_07035	COG0601	transmembrane transport
AB684_07040	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AB684_07045	COG0444	Belongs to the ABC transporter superfamily
AB684_07050	COG4166	transmembrane transport
AB684_07055	COG1619	proteins homologs of microcin C7 resistance protein MccF
AB684_07065	COG0791	NLP P60 protein
AB684_07070	COG4608	Belongs to the ABC transporter superfamily
AB684_07075	COG1834	amidinotransferase
AB684_07080	COG1607	acyl-coa hydrolase
AB684_07090	COG3866	Pectate lyase
AB684_07110	COG2318	DinB family
AB684_07115	COG2076	Multidrug Resistance protein
AB684_07120	COG2076	Multidrug Resistance protein
AB684_07125	COG0788	formyltetrahydrofolate deformylase activity
AB684_07130	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AB684_07135	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AB684_07140	COG1764	response to oxidative stress
AB684_07145	COG1846	Transcriptional regulator
AB684_07150	COG1764	response to oxidative stress
AB684_07160	COG0590	tRNA wobble adenosine to inosine editing
AB684_07165	COG0406	alpha-ribazole phosphatase activity
AB684_07180	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AB684_07185	COG1404	Belongs to the peptidase S8 family
AB684_07190	COG2239	Acts as a magnesium transporter
AB684_07200	COG0789	Transcriptional regulator
AB684_07210	COG1846	Transcriptional regulator
AB684_07215	COG1793	dna ligase
AB684_07215	COG3285	dna ligase
AB684_07220	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
AB684_07225	COG3300	MHYT domain
AB684_07225	COG5001	Diguanylate cyclase
AB684_07230	COG0586	Pfam SNARE associated Golgi protein
AB684_07235	COG0861	Integral membrane protein TerC family
AB684_07240	COG1191	sigma factor activity
AB684_07260	COG0501	Belongs to the peptidase M48B family
AB684_07265	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AB684_07270	COG0768	penicillin binding
AB684_07285	COG3594	Acyltransferase
AB684_07290	COG5002	protein histidine kinase activity
AB684_07295	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AB684_07300	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
AB684_07305	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
AB684_07310	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AB684_07315	COG0436	Aminotransferase
AB684_07320	COG1850	ribulose-bisphosphate carboxylase activity
AB684_07325	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
AB684_07325	COG0235	Class ii aldolase
AB684_07330	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
AB684_07335	COG0346	lactoylglutathione lyase activity
AB684_07340	COG3339	Conserved Protein
AB684_07350	COG3852	Histidine kinase
AB684_07355	COG1846	Transcriptional regulator
AB684_07360	COG1360	Flagellar Motor Protein
AB684_07365	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AB684_07370	COG0542	response to heat
AB684_07375	COG3949	Membrane
AB684_07380	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
AB684_07385	COG0720	synthase
AB684_07390	COG0602	queuosine metabolic process
AB684_07395	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
AB684_07405	COG0457	Tetratricopeptide repeat
AB684_07410	COG0457	Tetratricopeptide repeat
AB684_07415	COG3739	integral membrane protein
AB684_07420	COG3655	Transcriptional regulator
AB684_07450	COG4873	Protein conserved in bacteria
AB684_07460	COG3773	Cell wall hydrolase
AB684_07465	COG2244	polysaccharide biosynthetic process
AB684_07470	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_07475	COG2217	Heavy metal translocating P-type atpase
AB684_07480	COG0006	proline dipeptidase activity
AB684_07490	COG1609	Transcriptional regulator
AB684_07495	COG3711	transcriptional antiterminator
AB684_07500	COG1263	PTS System
AB684_07500	COG2190	(PTS) system
AB684_07500	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_07505	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_07510	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AB684_07520	COG1533	DNA photolyase activity
AB684_07525	COG0456	acetyltransferase
AB684_07530	COG0840	transmembrane signaling receptor activity
AB684_07535	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_07540	COG2084	Dehydrogenase
AB684_07545	COG2340	Cysteine-rich secretory protein family
AB684_07550	COG0768	penicillin binding
AB684_07555	COG4191	Histidine kinase
AB684_07560	COG0436	Aminotransferase
AB684_07565	COG1714	RDD family
AB684_07575	COG0835	chemotaxis
AB684_07575	COG0784	Response regulator, receiver
AB684_07585	COG2814	Major facilitator Superfamily
AB684_07590	COG1376	ErfK ybiS ycfS ynhG family protein
AB684_07595	COG1408	metallophosphoesterase
AB684_07600	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_07605	COG2200	EAL domain
AB684_07615	COG4703	Protein of unknown function (DUF1797)
AB684_07620	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
AB684_07630	COG0517	IMP dehydrogenase activity
AB684_07635	COG0583	DNA-binding transcription factor activity
AB684_07640	COG0716	FMN binding
AB684_07650	COG0716	FMN binding
AB684_07655	COG2171	N-acyltransferase activity
AB684_07660	COG1473	amidohydrolase
AB684_07670	COG0450	alkyl hydroperoxide reductase
AB684_07675	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_07690	COG0746	molybdenum cofactor guanylyltransferase activity
AB684_07695	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AB684_07700	COG0303	'Molybdopterin
AB684_07705	COG1763	Mo-molybdopterin cofactor biosynthetic process
AB684_07710	COG0314	molybdopterin synthase activity
AB684_07715	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
AB684_07725	COG1132	(ABC) transporter
AB684_07730	COG1132	(ABC) transporter
AB684_07740	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AB684_07745	COG1136	(ABC) transporter
AB684_07750	COG0577	efflux transmembrane transporter activity
AB684_07755	COG1349	DNA-binding transcription factor activity
AB684_07760	COG1105	Belongs to the carbohydrate kinase PfkB family
AB684_07765	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_07765	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AB684_07765	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AB684_07785	COG0488	(ABC) transporter
AB684_07795	COG2309	aminopeptidase activity
AB684_07800	COG1077	Cell shape determining protein MreB Mrl
AB684_07805	COG2002	toxin-antitoxin pair type II binding
AB684_07810	COG3852	Histidine kinase
AB684_07815	COG0569	domain protein
AB684_07820	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AB684_07825	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AB684_07835	COG0561	phosphatase activity
AB684_07845	COG0242	peptide deformylase activity
AB684_07855	COG0497	DNA recombination
AB684_07860	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AB684_07865	COG0022	dehydrogenase e1 component
AB684_07870	COG0508	dehydrogenase complex catalyzes the overall conversion of
AB684_07875	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AB684_07880	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_07885	COG1982	Orn Lys Arg decarboxylase major
AB684_07890	COG4476	Belongs to the UPF0223 family
AB684_07895	COG4493	Belongs to the UPF0637 family
AB684_07905	COG0483	inositol monophosphate 1-phosphatase activity
AB684_07925	COG1595	DNA-templated transcription, initiation
AB684_07950	COG1846	Transcriptional regulator
AB684_07955	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AB684_07960	COG4896	Protein conserved in bacteria
AB684_07970	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
AB684_07975	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AB684_07980	COG2066	Belongs to the glutaminase family
AB684_07985	COG4838	Belongs to the UPF0358 family
AB684_07990	COG0772	Belongs to the SEDS family
AB684_07995	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
AB684_08000	COG1612	heme a metabolic process
AB684_08005	COG0109	protoheme IX farnesyltransferase activity
AB684_08010	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AB684_08010	COG2010	Cytochrome c
AB684_08015	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AB684_08020	COG1845	cytochrome c oxidase, subunit III
AB684_08025	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AB684_08030	COG3336	cytochrome c oxidase
AB684_08040	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
AB684_08045	COG2340	Cysteine-rich secretory protein family
AB684_08060	COG3679	Belongs to the UPF0342 family
AB684_08065	COG4471	UPF0298 protein
AB684_08070	COG0742	ribosomal rna small subunit methyltransferase
AB684_08075	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AB684_08080	COG3314	Sporulation integral membrane protein YlbJ
AB684_08085	COG3480	Lon protease (S16) C-terminal proteolytic domain
AB684_08090	COG1323	Belongs to the UPF0348 family
AB684_08095	COG1399	metal-binding, possibly nucleic acid-binding protein
AB684_08105	COG0454	-acetyltransferase
AB684_08110	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AB684_08115	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
AB684_08120	COG2001	Belongs to the MraZ family
AB684_08125	COG0275	rRNA processing
AB684_08130	COG4839	cell division protein FtsL
AB684_08140	COG0768	penicillin binding
AB684_08145	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AB684_08150	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AB684_08155	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AB684_08160	COG0772	Belongs to the SEDS family
AB684_08165	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AB684_08170	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AB684_08175	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AB684_08180	COG3879	Bacterial protein of unknown function (DUF881)
AB684_08185	COG3879	Bacterial protein of unknown function (DUF881)
AB684_08190	COG3856	small basic protein
AB684_08195	COG0849	cell division
AB684_08200	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AB684_08205	COG4412	M6 family metalloprotease domain protein
AB684_08205	COG1404	Belongs to the peptidase S8 family
AB684_08210	COG4412	M6 family metalloprotease domain protein
AB684_08210	COG1404	Belongs to the peptidase S8 family
AB684_08220	COG1191	sigma factor activity
AB684_08225	COG1191	sigma factor activity
AB684_08230	COG1119	ATPase activity
AB684_08235	COG0500	methyltransferase
AB684_08240	COG1873	PFAM PRC-barrel domain
AB684_08250	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AB684_08255	COG1799	cell septum assembly
AB684_08260	COG0762	integral membrane protein
AB684_08265	COG2302	S4 RNA-binding domain
AB684_08270	COG3599	regulation of cell shape
AB684_08275	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AB684_08280	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AB684_08285	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AB684_08290	COG0564	pseudouridine synthase activity
AB684_08295	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AB684_08300	COG2233	PERMEase
AB684_08305	COG0540	Belongs to the ATCase OTCase family
AB684_08310	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AB684_08315	COG0505	Belongs to the CarA family
AB684_08320	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AB684_08325	COG0543	2 iron, 2 sulfur cluster binding
AB684_08330	COG0167	dihydroorotate dehydrogenase activity
AB684_08335	COG0284	orotidine-5'-phosphate decarboxylase activity
AB684_08340	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AB684_08345	COG0175	sulfate reduction
AB684_08350	COG0306	phosphate transporter
AB684_08355	COG2046	Belongs to the sulfate adenylyltransferase family
AB684_08360	COG0529	Catalyzes the synthesis of activated sulfate
AB684_08365	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AB684_08370	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
AB684_08375	COG1648	precorrin-2 dehydrogenase activity
AB684_08385	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AB684_08390	COG1561	YicC-like family, N-terminal region
AB684_08395	COG2052	Domain of unknown function (DUF370)
AB684_08400	COG0194	GDP metabolic process
AB684_08405	COG1758	RNA polymerase activity
AB684_08410	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AB684_08415	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AB684_08420	COG0242	peptide deformylase activity
AB684_08425	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AB684_08430	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AB684_08430	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AB684_08435	COG0820	rRNA (adenine-C2-)-methyltransferase activity
AB684_08440	COG0631	protein serine/threonine phosphatase activity
AB684_08445	COG0515	serine threonine protein kinase
AB684_08445	COG2815	serine threonine protein kinase
AB684_08450	COG1162	GTPase activity
AB684_08455	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AB684_08460	COG1564	THIamine pyrophosphokinase
AB684_08470	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AB684_08475	COG1302	Protein conserved in bacteria
AB684_08480	COG1461	Dihydroxyacetone kinase
AB684_08485	COG1760	l-serine dehydratase
AB684_08490	COG1760	l-serine dehydratase
AB684_08495	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AB684_08500	COG1349	DNA-binding transcription factor activity
AB684_08505	COG0416	fatty acid biosynthetic process
AB684_08510	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AB684_08515	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_08520	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AB684_08525	COG0571	ribonuclease III activity
AB684_08530	COG1196	nuclear chromosome segregation
AB684_08535	COG0552	protein localization to endoplasmic reticulum
AB684_08540	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
AB684_08545	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AB684_08550	COG0228	four-way junction DNA binding
AB684_08555	COG1837	Belongs to the UPF0109 family
AB684_08565	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AB684_08570	COG0336	Belongs to the RNA methyltransferase TrmD family
AB684_08575	COG0335	large ribosomal subunit rRNA binding
AB684_08580	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AB684_08585	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AB684_08595	COG2257	FlhB HrpN YscU SpaS Family
AB684_08600	COG0045	succinate-CoA ligase (ADP-forming) activity
AB684_08605	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AB684_08610	COG0758	DNA mediated transformation
AB684_08615	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AB684_08620	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
AB684_08625	COG4974	Belongs to the 'phage' integrase family
AB684_08630	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AB684_08635	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AB684_08640	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
AB684_08645	COG1815	bacterial-type flagellum-dependent cell motility
AB684_08650	COG1558	bacterial-type flagellum-dependent cell motility
AB684_08655	COG1677	Flagellar hook-basal body complex protein FliE
AB684_08660	COG1766	The M ring may be actively involved in energy transduction
AB684_08665	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AB684_08670	COG1317	bacterial-type flagellum organization
AB684_08675	COG1157	protein secretion by the type III secretion system
AB684_08680	COG2882	bacterial-type flagellum organization
AB684_08690	COG3144	bacterial-type flagellum assembly
AB684_08695	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
AB684_08700	COG4786	Flagellar basal body rod
AB684_08705	COG1582	Flagellar protein (FlbD)
AB684_08710	COG1580	Controls the rotational direction of flagella during chemotaxis
AB684_08715	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AB684_08720	COG1776	CheC inhibitor of MCP methylation
AB684_08720	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AB684_08725	COG2201	protein-glutamate methylesterase activity
AB684_08730	COG3190	flagellar
AB684_08735	COG1338	Plays a role in the flagellum-specific transport system
AB684_08740	COG1987	bacterial-type flagellum assembly
AB684_08745	COG1684	flagellar biosynthetic protein fliR
AB684_08750	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AB684_08755	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AB684_08760	COG1419	protein localization to endoplasmic reticulum
AB684_08765	COG0455	bacterial-type flagellum organization
AB684_08770	COG2201	protein-glutamate methylesterase activity
AB684_08775	COG2198	Histidine kinase
AB684_08775	COG0643	Histidine kinase
AB684_08780	COG0835	chemotaxis
AB684_08785	COG1776	CheC inhibitor of MCP methylation
AB684_08790	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
AB684_08795	COG1191	sigma factor activity
AB684_08805	COG0052	Belongs to the universal ribosomal protein uS2 family
AB684_08810	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AB684_08815	COG0528	UMP kinase activity
AB684_08820	COG0233	cytoplasmic translational termination
AB684_08825	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AB684_08830	COG4589	Belongs to the CDS family
AB684_08835	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
AB684_08840	COG0750	zinc metalloprotease
AB684_08845	COG0442	prolyl-tRNA aminoacylation
AB684_08850	COG2176	DNA-directed DNA polymerase activity
AB684_08880	COG0779	Required for maturation of 30S ribosomal subunits
AB684_08885	COG0195	Participates in both transcription termination and antitermination
AB684_08890	COG2740	Nucleic-acid-binding protein implicated in transcription termination
AB684_08895	COG1358	cellular component organization or biogenesis
AB684_08900	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AB684_08905	COG1550	Protein conserved in bacteria
AB684_08910	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AB684_08915	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AB684_08920	COG0196	riboflavin kinase activity
AB684_08925	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AB684_08930	COG1185	polyribonucleotide nucleotidyltransferase activity
AB684_08935	COG0726	polysaccharide deacetylase
AB684_08940	COG0612	Peptidase, M16
AB684_08945	COG1873	PFAM PRC-barrel domain
AB684_08950	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AB684_08955	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AB684_08960	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AB684_08965	COG0527	aspartate kinase activity
AB684_08975	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AB684_08980	COG0740	serine-type endopeptidase activity
AB684_08990	COG4980	gas vesicle protein
AB684_08990	COG1674	ftsk spoiiie
AB684_08995	COG2188	Transcriptional regulator
AB684_09000	COG2814	Major facilitator Superfamily
AB684_09005	COG0612	Peptidase, M16
AB684_09010	COG0612	Peptidase, M16
AB684_09015	COG0300	oxidoreductase activity
AB684_09030	COG1426	Protein conserved in bacteria
AB684_09035	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AB684_09040	COG1546	Belongs to the CinA family
AB684_09040	COG1058	Belongs to the CinA family
AB684_09045	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AB684_09050	COG1418	mRNA catabolic process
AB684_09055	COG1692	metallophosphoesterase
AB684_09060	COG2359	stage V sporulation protein S
AB684_09070	COG1063	alcohol dehydrogenase
AB684_09075	COG0156	8-amino-7-oxononanoate synthase activity
AB684_09080	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AB684_09085	COG4550	Control of competence regulator ComK, YlbF/YmcA
AB684_09095	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AB684_09100	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AB684_09105	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AB684_09110	COG5444	nuclease activity
AB684_09125	COG0523	cobalamin synthesis protein
AB684_09135	COG1247	-acetyltransferase
AB684_09145	COG1231	oxidoreductase activity
AB684_09150	COG3619	membrane
AB684_09155	COG3263	regulation of cellular component size
AB684_09170	COG0393	Putative heavy-metal-binding
AB684_09175	COG0398	Pfam SNARE associated Golgi protein
AB684_09180	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AB684_09185	COG1819	glycosyl
AB684_09190	COG0531	amino acid
AB684_09195	COG5577	PFAM Coat F domain
AB684_09205	COG1388	LysM domain
AB684_09205	COG3858	chitin binding
AB684_09210	COG1309	transcriptional regulator
AB684_09215	COG3631	Ketosteroid isomerase-related protein
AB684_09220	COG0702	epimerase
AB684_09230	COG1764	response to oxidative stress
AB684_09235	COG2076	Multidrug Resistance protein
AB684_09240	COG2076	Multidrug Resistance protein
AB684_09255	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AB684_09260	COG1923	regulation of RNA biosynthetic process
AB684_09275	COG1780	Probably involved in ribonucleotide reductase function
AB684_09280	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AB684_09285	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AB684_09290	COG4112	unkown
AB684_09305	COG0735	belongs to the Fur family
AB684_09310	COG1802	Transcriptional regulator
AB684_09350	COG1309	transcriptional regulator
AB684_09400	COG0464	growth
AB684_09405	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AB684_09410	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
AB684_09415	COG0789	Transcriptional regulator
AB684_09420	COG0174	glutamine synthetase
AB684_09460	COG1073	alpha beta
AB684_09500	COG1309	transcriptional regulator
AB684_09505	COG2076	Multidrug Resistance protein
AB684_09510	COG2076	Multidrug Resistance protein
AB684_09515	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AB684_09530	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_09535	COG3546	catalase activity
AB684_09560	COG1846	Transcriptional regulator
AB684_09565	COG0778	Nitroreductase
AB684_09570	COG0346	lactoylglutathione lyase activity
AB684_09575	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AB684_09580	COG0655	NAD(P)H dehydrogenase (quinone) activity
AB684_09595	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AB684_09600	COG3209	COG3209 Rhs family protein
AB684_09605	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AB684_09610	COG1388	LysM domain
AB684_09615	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AB684_09620	COG4224	UPF0291 protein
AB684_09625	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AB684_09635	COG3763	UPF0154 protein
AB684_09645	COG0785	Cytochrome C biogenesis protein
AB684_09650	COG2201	protein-glutamate methylesterase activity
AB684_09655	COG4846	Membrane protein involved in cytochrome C biogenesis
AB684_09665	COG0071	Belongs to the small heat shock protein (HSP20) family
AB684_09680	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AB684_09685	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_09700	COG0824	Thioesterase
AB684_09725	COG4841	protein insertion into membrane
AB684_09730	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
AB684_09735	COG1832	CoA-binding protein
AB684_09740	COG0187	DNA topoisomerase II activity
AB684_09745	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AB684_09750	COG1609	Transcriptional regulator
AB684_09765	COG2160	L-arabinose isomerase activity
AB684_09785	COG1115	amino acid carrier protein
AB684_09795	COG2181	nitrate reductase activity
AB684_09800	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
AB684_09805	COG1140	nitrate reductase beta subunit
AB684_09810	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AB684_09830	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AB684_09840	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AB684_09845	COG2223	nitrite transmembrane transporter activity
AB684_09865	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
AB684_09875	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
AB684_09885	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AB684_09905	COG3420	alginic acid biosynthetic process
AB684_09910	COG1114	Component of the transport system for branched-chain amino acids
AB684_09920	COG0789	Transcriptional regulator
AB684_09945	COG1024	Enoyl-CoA hydratase
AB684_09950	COG1012	belongs to the aldehyde dehydrogenase family
AB684_09955	COG2084	Dehydrogenase
AB684_09960	COG1960	acyl-CoA dehydrogenase activity
AB684_09965	COG1482	cell wall glycoprotein biosynthetic process
AB684_09970	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_09970	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AB684_09970	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AB684_09990	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_09990	COG3711	transcriptional antiterminator
AB684_10005	COG1725	Transcriptional regulator
AB684_10010	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_10015	COG1312	Catalyzes the dehydration of D-mannonate
AB684_10030	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
AB684_10040	COG1609	Transcriptional regulator
AB684_10045	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AB684_10050	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AB684_10055	COG0640	Transcriptional regulator
AB684_10065	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
AB684_10080	COG1649	PFAM Uncharacterised BCR, COG1649
AB684_10085	COG2404	hydrolase activity, acting on ester bonds
AB684_10090	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AB684_10100	COG2027	D-alanyl-D-alanine carboxypeptidase
AB684_10105	COG1252	NADH dehydrogenase
AB684_10120	COG0166	Belongs to the GPI family
AB684_10130	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AB684_10135	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AB684_10140	COG1024	Enoyl-CoA hydratase
AB684_10145	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AB684_10150	COG0511	ligase activity, forming carbon-carbon bonds
AB684_10155	COG0439	Biotin carboxylase
AB684_10160	COG0318	PFAM AMP-dependent synthetase and ligase
AB684_10165	COG1960	acyl-CoA dehydrogenase activity
AB684_10170	COG2249	NAD(P)H dehydrogenase (quinone) activity
AB684_10175	COG1733	regulation of RNA biosynthetic process
AB684_10180	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AB684_10185	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AB684_10195	COG2323	membrane
AB684_10205	COG0306	phosphate transporter
AB684_10210	COG0175	sulfate reduction
AB684_10215	COG1809	phosphosulfolactate synthase activity
AB684_10220	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AB684_10225	COG4948	Mandelate Racemase Muconate Lactonizing
AB684_10230	COG2814	Major facilitator Superfamily
AB684_10235	COG0463	Glycosyl transferase, family 2
AB684_10250	COG0493	'glutamate synthase
AB684_10255	COG0070	glutamate synthase
AB684_10255	COG0067	glutamate synthase
AB684_10255	COG0069	glutamate synthase activity
AB684_10260	COG0583	DNA-binding transcription factor activity
AB684_10280	COG1846	Transcriptional regulator
AB684_10290	COG1132	(ABC) transporter
AB684_10300	COG0300	oxidoreductase activity
AB684_10305	COG0574	Belongs to the PEP-utilizing enzyme family
AB684_10305	COG3848	Pyruvate phosphate dikinase
AB684_10310	COG0477	Major facilitator Superfamily
AB684_10315	COG0243	molybdopterin cofactor binding
AB684_10320	COG1846	Transcriptional regulator
AB684_10325	COG2814	Major facilitator Superfamily
AB684_10330	COG0531	amino acid
AB684_10340	COG0531	amino acid
AB684_10345	COG0531	amino acid
AB684_10350	COG0697	spore germination
AB684_10360	COG0840	transmembrane signaling receptor activity
AB684_10365	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AB684_10370	COG1404	Belongs to the peptidase S8 family
AB684_10380	COG1309	transcriptional regulator
AB684_10385	COG1846	Transcriptional regulator
AB684_10415	COG1309	transcriptional regulator
AB684_10420	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AB684_10425	COG3708	Transcriptional regulator
AB684_10435	COG2378	regulation of single-species biofilm formation
AB684_10445	COG0640	Transcriptional regulator
AB684_10450	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AB684_10460	COG0531	amino acid
AB684_10465	COG0741	lytic transglycosylase activity
AB684_10470	COG1086	Polysaccharide biosynthesis protein
AB684_10490	COG2322	membrane
AB684_10505	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AB684_10510	COG3584	3D domain protein
AB684_10510	COG1388	LysM domain
AB684_10515	COG0514	ATP-dependent DNA helicase (RecQ)
AB684_10530	COG2315	Protein conserved in bacteria
AB684_10545	COG2427	Protein of unknown function (DUF1641)
AB684_10555	COG2801	Transposase and inactivated derivatives
AB684_10580	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
AB684_10630	COG0402	S-adenosylhomocysteine deaminase activity
AB684_10645	COG2267	carboxylic ester hydrolase activity
AB684_10655	COG1280	lysine exporter protein (LysE YggA)
AB684_10660	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AB684_10670	COG3848	Pyruvate phosphate dikinase
AB684_10670	COG0574	Belongs to the PEP-utilizing enzyme family
AB684_10675	COG1309	transcriptional regulator
AB684_10690	COG2318	DinB family
AB684_10695	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AB684_10700	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AB684_10715	COG1012	belongs to the aldehyde dehydrogenase family
AB684_10720	COG2814	Major facilitator Superfamily
AB684_10735	COG1657	PFAM Prenyltransferase squalene oxidase
AB684_10740	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AB684_10750	COG0733	neurotransmitter:sodium symporter activity
AB684_10755	COG0385	Bile acid
AB684_10760	COG0508	dehydrogenase complex catalyzes the overall conversion of
AB684_10765	COG0567	Dehydrogenase, E1 component
AB684_10770	COG4548	von Willebrand factor, type A
AB684_10775	COG0714	Associated with various cellular activities
AB684_10780	COG2032	superoxide dismutase activity
AB684_10785	COG0791	NLP P60 protein
AB684_10785	COG1388	LysM domain
AB684_10795	COG0534	Mate efflux family protein
AB684_10800	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AB684_10805	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AB684_10815	COG2962	Rard protein
AB684_10825	COG4305	rare lipoprotein A
AB684_10840	COG1733	regulation of RNA biosynthetic process
AB684_10845	COG0778	Nitroreductase
AB684_10850	COG0400	carboxylic ester hydrolase activity
AB684_10860	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AB684_10870	COG2801	Transposase and inactivated derivatives
AB684_10875	COG3409	Peptidoglycan-binding domain 1 protein
AB684_10875	COG0793	Belongs to the peptidase S41A family
AB684_10880	COG2226	methyltransferase
AB684_10890	COG1876	peptidase activity
AB684_10895	COG0813	purine-nucleoside phosphorylase activity
AB684_10900	COG0701	Predicted permease
AB684_10915	COG0671	phosphoesterase, PA-phosphatase related
AB684_10925	COG4479	Belongs to the UPF0346 family
AB684_10935	COG1509	lysine 2,3-aminomutase activity
AB684_10940	COG3331	DNA recombination
AB684_10950	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
AB684_10970	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AB684_11000	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AB684_11020	COG0756	dUTP diphosphatase activity
AB684_11030	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_11040	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AB684_11060	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AB684_11065	COG1780	Probably involved in ribonucleotide reductase function
AB684_11140	COG3584	3D domain protein
AB684_11160	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AB684_11165	COG0358	DNA primase activity
AB684_11170	COG0305	Participates in initiation and elongation during chromosome replication
AB684_11180	COG2887	Belongs to the helicase family. UvrD subfamily
AB684_11250	COG1793	dna ligase
AB684_11305	COG4474	Belongs to the UPF0398 family
AB684_11315	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AB684_11340	COG0582	viral genome integration into host DNA
AB684_11370	COG1404	Belongs to the peptidase S8 family
AB684_11455	COG3655	Transcriptional regulator
AB684_11530	COG1404	Belongs to the peptidase S8 family
AB684_11560	COG0776	regulation of translation
AB684_11680	COG0582	viral genome integration into host DNA
AB684_11745	COG0739	heme binding
AB684_11745	COG1196	nuclear chromosome segregation
AB684_11745	COG0741	lytic transglycosylase activity
AB684_11750	COG0739	heme binding
AB684_11750	COG0741	lytic transglycosylase activity
AB684_11750	COG1196	nuclear chromosome segregation
AB684_11760	COG2433	Pfam Transposase IS66
AB684_11770	COG5434	Belongs to the glycosyl hydrolase 28 family
AB684_11775	COG5632	N-Acetylmuramoyl-L-alanine amidase
AB684_11795	COG0457	Tetratricopeptide repeat
AB684_11800	COG2814	Major facilitator Superfamily
AB684_11830	COG5444	nuclease activity
AB684_11835	COG4282	regulation of fungal-type cell wall biogenesis
AB684_11845	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AB684_11855	COG0456	acetyltransferase
AB684_11860	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AB684_11865	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AB684_11870	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AB684_11875	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AB684_11885	COG0456	acetyltransferase
AB684_11890	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AB684_11895	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AB684_11900	COG1846	Transcriptional regulator
AB684_11910	COG3706	GGDEF domain
AB684_11915	COG0534	Mate efflux family protein
AB684_11930	COG4698	Protein conserved in bacteria
AB684_11935	COG2755	lipolytic protein G-D-S-L family
AB684_11940	COG1999	signal sequence binding
AB684_11955	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AB684_11960	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AB684_11965	COG1272	protein, Hemolysin III
AB684_11970	COG0204	Acyl-transferase
AB684_11975	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AB684_11980	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AB684_11990	COG2521	methyltransferase
AB684_11990	COG2136	Putative SAM-dependent methyltransferase
AB684_12000	COG0129	dihydroxy-acid dehydratase activity
AB684_12005	COG1413	lyase activity
AB684_12010	COG1418	mRNA catabolic process
AB684_12015	COG0386	Belongs to the glutathione peroxidase family
AB684_12020	COG2759	Belongs to the formate--tetrahydrofolate ligase family
AB684_12025	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
AB684_12030	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AB684_12040	COG1278	Cold shock
AB684_12060	COG0328	RNA-DNA hybrid ribonuclease activity
AB684_12065	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
AB684_12070	COG0328	RNA-DNA hybrid ribonuclease activity
AB684_12080	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AB684_12090	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
AB684_12100	COG1755	Isoprenylcysteine carboxyl methyltransferase
AB684_12105	COG3424	synthase
AB684_12110	COG0456	acetyltransferase
AB684_12115	COG2233	PERMEase
AB684_12120	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AB684_12125	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
AB684_12130	COG1199	ATP-dependent helicase activity
AB684_12140	COG2801	Transposase and inactivated derivatives
AB684_12150	COG0116	Belongs to the methyltransferase superfamily
AB684_12160	COG3599	regulation of cell shape
AB684_12165	COG4474	Belongs to the UPF0398 family
AB684_12175	COG3359	exonuclease
AB684_12180	COG1111	helicase
AB684_12180	COG1205	dead DEAH box helicase
AB684_12185	COG2190	(PTS) system
AB684_12190	COG0071	Belongs to the small heat shock protein (HSP20) family
AB684_12230	COG3331	DNA recombination
AB684_12235	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AB684_12235	COG4499	WXG100 protein secretion system (Wss), protein YukC
AB684_12245	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AB684_12250	COG3935	DnaD domain protein
AB684_12255	COG0017	Asparaginyl-tRNA synthetase
AB684_12260	COG0436	Aminotransferase
AB684_12265	COG5353	protein conserved in bacteria
AB684_12270	COG1199	ATP-dependent helicase activity
AB684_12270	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AB684_12275	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
AB684_12280	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
AB684_12285	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
AB684_12300	COG0617	tRNA 3'-terminal CCA addition
AB684_12305	COG0438	transferase activity, transferring glycosyl groups
AB684_12310	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AB684_12315	COG1803	Methylglyoxal synthase
AB684_12320	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AB684_12325	COG1694	Mazg nucleotide pyrophosphohydrolase
AB684_12330	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AB684_12340	COG4347	Protein of unknown function (DUF1405)
AB684_12345	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AB684_12345	COG2010	Cytochrome c
AB684_12350	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AB684_12355	COG0723	plastoquinol--plastocyanin reductase activity
AB684_12365	COG5582	Belongs to the UPF0302 family
AB684_12370	COG0457	Tetratricopeptide repeat
AB684_12375	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AB684_12380	COG0287	Prephenate dehydrogenase
AB684_12385	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AB684_12390	COG0159	tryptophan synthase activity
AB684_12395	COG0133	tryptophan synthase activity
AB684_12400	COG0135	phosphoribosylanthranilate isomerase activity
AB684_12405	COG0134	indole-3-glycerol-phosphate synthase activity
AB684_12410	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AB684_12415	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AB684_12420	COG4401	Chorismate mutase type I
AB684_12425	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AB684_12430	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AB684_12435	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AB684_12440	COG0105	UTP biosynthetic process
AB684_12445	COG0142	geranyltranstransferase activity
AB684_12450	COG2226	methyltransferase
AB684_12455	COG0142	geranyltranstransferase activity
AB684_12470	COG0776	regulation of translation
AB684_12475	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
AB684_12495	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AB684_12500	COG1160	GTP binding
AB684_12520	COG1304	FMN binding
AB684_12525	COG0539	negative regulation of cytoplasmic translation
AB684_12530	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
AB684_12535	COG2959	enzyme of heme biosynthesis
AB684_12540	COG3409	Peptidoglycan-binding domain 1 protein
AB684_12540	COG3773	Cell wall hydrolase
AB684_12545	COG2339	peptidase activity
AB684_12555	COG0492	ferredoxin-NADP+ reductase activity
AB684_12560	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AB684_12565	COG4862	establishment of competence for transformation
AB684_12570	COG1408	metallophosphoesterase
AB684_12580	COG1388	LysM domain
AB684_12585	COG1266	CAAX protease self-immunity
AB684_12590	COG0514	ATP-dependent DNA helicase (RecQ)
AB684_12595	COG4955	Helix-turn-helix domain
AB684_12600	COG1141	Ferredoxin
AB684_12610	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AB684_12615	COG0739	heme binding
AB684_12625	COG1595	DNA-templated transcription, initiation
AB684_12645	COG5002	protein histidine kinase activity
AB684_12650	COG0745	RESPONSE REGULATOR receiver
AB684_12655	COG5002	protein histidine kinase activity
AB684_12660	COG0745	RESPONSE REGULATOR receiver
AB684_12665	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AB684_12670	COG1333	cytochrome c biogenesis protein
AB684_12675	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_12680	COG1187	pseudouridine synthase activity
AB684_12685	COG0700	Nucleoside recognition
AB684_12690	COG2715	membrane protein required for spore maturation
AB684_12695	COG1686	Belongs to the peptidase S11 family
AB684_12705	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AB684_12710	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AB684_12715	COG1547	Domain of unknown function (DUF309)
AB684_12720	COG0456	acetyltransferase
AB684_12725	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AB684_12730	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AB684_12730	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AB684_12735	COG0307	riboflavin synthase, alpha
AB684_12740	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AB684_12740	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AB684_12765	COG0457	Tetratricopeptide repeat
AB684_12770	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AB684_12775	COG4086	secreted protein
AB684_12780	COG4195	phage-related replication protein
AB684_12785	COG0019	diaminopimelate decarboxylase activity
AB684_12795	COG0697	spore germination
AB684_12810	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AB684_12845	COG1686	Belongs to the peptidase S11 family
AB684_12850	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
AB684_12855	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AB684_12860	COG4974	Belongs to the 'phage' integrase family
AB684_12870	COG0735	belongs to the Fur family
AB684_12875	COG1300	Membrane
AB684_12880	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AB684_12890	COG1953	Uracil, thiamine, allantoin
AB684_12895	COG1953	Uracil, thiamine, allantoin
AB684_12905	COG2153	protein acetylation
AB684_12910	COG1379	DNA repair
AB684_12915	COG0494	nUDIX hydrolase
AB684_12920	COG1309	transcriptional regulator
AB684_12930	COG0667	Aldo Keto reductase
AB684_12940	COG1073	alpha beta
AB684_12950	COG4918	Iron-sulphur cluster biosynthesis
AB684_12965	COG2329	Antibiotic biosynthesis monooxygenase
AB684_12975	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
AB684_12985	COG0747	negative chemotaxis
AB684_12990	COG0601	transmembrane transport
AB684_13000	COG0444	Belongs to the ABC transporter superfamily
AB684_13010	COG0534	Mate efflux family protein
AB684_13025	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AB684_13035	COG2211	Major facilitator Superfamily
AB684_13040	COG0346	lactoylglutathione lyase activity
AB684_13045	COG1072	(Pantothenic acid kinase))
AB684_13080	COG4195	phage-related replication protein
AB684_13090	COG0300	oxidoreductase activity
AB684_13095	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AB684_13100	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AB684_13105	COG4187	Peptidase family M20/M25/M40
AB684_13110	COG1902	pentaerythritol trinitrate reductase activity
AB684_13115	COG0596	Alpha beta hydrolase
AB684_13120	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AB684_13125	COG1234	tRNA 3'-trailer cleavage
AB684_13130	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AB684_13150	COG2188	Transcriptional regulator
AB684_13155	COG2723	6-phospho-beta-galactosidase activity
AB684_13160	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AB684_13165	COG1447	Phosphotransferase system cellobiose-specific component IIA
AB684_13170	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AB684_13175	COG1785	Belongs to the alkaline phosphatase family
AB684_13180	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_13185	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AB684_13190	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AB684_13200	COG0706	membrane insertase activity
AB684_13205	COG2195	Cleaves the N-terminal amino acid of tripeptides
AB684_13210	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AB684_13215	COG4129	membrane
AB684_13220	COG1126	abc transporter atp-binding protein
AB684_13225	COG0765	amino acid transport
AB684_13230	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AB684_13240	COG1597	lipid kinase activity
AB684_13245	COG0508	dehydrogenase complex catalyzes the overall conversion of
AB684_13250	COG0022	dehydrogenase e1 component
AB684_13255	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AB684_13260	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AB684_13265	COG3426	butyrate kinase activity
AB684_13275	COG0280	phosphate acetyltransferase
AB684_13280	COG3290	protein histidine kinase activity
AB684_13280	COG3829	transcription factor binding
AB684_13290	COG0584	glycerophosphoryl diester phosphodiesterase
AB684_13295	COG0860	N-Acetylmuramoyl-L-alanine amidase
AB684_13310	COG1045	serine acetyltransferase
AB684_13320	COG0745	RESPONSE REGULATOR receiver
AB684_13325	COG0750	zinc metalloprotease
AB684_13330	COG0497	DNA recombination
AB684_13335	COG1438	arginine binding
AB684_13340	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
AB684_13345	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AB684_13350	COG0142	geranyltranstransferase activity
AB684_13355	COG1722	exodeoxyribonuclease VII activity
AB684_13360	COG1570	exodeoxyribonuclease VII activity
AB684_13365	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AB684_13370	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AB684_13375	COG1302	Protein conserved in bacteria
AB684_13380	COG0439	Biotin carboxylase
AB684_13385	COG0511	ligase activity, forming carbon-carbon bonds
AB684_13425	COG3854	ATPases associated with a variety of cellular activities
AB684_13435	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AB684_13440	COG0006	proline dipeptidase activity
AB684_13445	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
AB684_13455	COG3872	metal-dependent enzyme
AB684_13465	COG1752	Esterase of the alpha-beta hydrolase superfamily
AB684_13475	COG1321	iron dependent repressor
AB684_13480	COG0095	Lipoate-protein ligase
AB684_13485	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AB684_13490	COG2113	Glycine betaine
AB684_13495	COG4176	ABC-type proline glycine betaine transport system permease component
AB684_13500	COG4175	Glycine betaine
AB684_13500	COG0517	IMP dehydrogenase activity
AB684_13505	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AB684_13510	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AB684_13515	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AB684_13520	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AB684_13545	COG0681	Belongs to the peptidase S26 family
AB684_13570	COG4940	Competence protein ComGF
AB684_13580	COG4970	Tfp pilus assembly protein FimT
AB684_13585	COG4537	Required for transformation and DNA binding
AB684_13590	COG1459	type II secretion system
AB684_13595	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AB684_13600	COG1366	Belongs to the anti-sigma-factor antagonist family
AB684_13610	COG1393	Belongs to the ArsC family
AB684_13620	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AB684_13625	COG0011	TIGRFAM Protein of
AB684_13635	COG2866	Carboxypeptidase
AB684_13640	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AB684_13645	COG1368	sulfuric ester hydrolase activity
AB684_13650	COG1940	carbohydrate kinase activity
AB684_13655	COG4483	Protein conserved in bacteria
AB684_13660	COG0697	spore germination
AB684_13665	COG0457	Tetratricopeptide repeat
AB684_13665	COG0705	Rhomboid family
AB684_13670	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AB684_13675	COG0438	transferase activity, transferring glycosyl groups
AB684_13690	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AB684_13695	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AB684_13700	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AB684_13705	COG0581	inorganic phosphate transmembrane transporter activity
AB684_13710	COG0573	inorganic phosphate transmembrane transporter activity
AB684_13715	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AB684_13725	COG0477	Major facilitator Superfamily
AB684_13730	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AB684_13735	COG2839	Protein conserved in bacteria
AB684_13740	COG5521	maltodextrose utilization protein MalA
AB684_13745	COG1388	LysM domain
AB684_13750	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
AB684_13755	COG4709	membrane
AB684_13760	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
AB684_13765	COG0735	belongs to the Fur family
AB684_13770	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AB684_13775	COG1121	(ABC) transporter
AB684_13780	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AB684_13790	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
AB684_13795	COG0513	Belongs to the DEAD box helicase family
AB684_13805	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
AB684_13810	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AB684_13815	COG2384	SAM-dependent methyltransferase
AB684_13870	COG5444	nuclease activity
AB684_13885	COG2010	Cytochrome c
AB684_13890	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AB684_13895	COG0358	DNA primase activity
AB684_13900	COG1671	Belongs to the UPF0178 family
AB684_13905	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
AB684_13910	COG0517	IMP dehydrogenase activity
AB684_13915	COG0751	glycine-tRNA ligase activity
AB684_13920	COG0752	glycyl-tRNA synthetase alpha subunit
AB684_13925	COG1381	Involved in DNA repair and RecF pathway recombination
AB684_13930	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AB684_13935	COG0295	cytidine deaminase activity
AB684_13940	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AB684_13945	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AB684_13950	COG1480	7TM receptor with intracellular HD hydrolase
AB684_13955	COG1702	phosphate starvation-inducible protein PhoH
AB684_13960	COG0561	phosphatase activity
AB684_13975	COG4864	UPF0365 protein
AB684_13980	COG1030	water channel activity
AB684_13985	COG1610	YqeY-like protein
AB684_13990	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AB684_13995	COG1283	sodium-dependent phosphate transmembrane transporter activity
AB684_14000	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AB684_14005	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AB684_14010	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AB684_14015	COG2264	protein methyltransferase activity
AB684_14020	COG0484	heat shock protein binding
AB684_14025	COG0443	Heat shock 70 kDa protein
AB684_14030	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AB684_14035	COG1420	regulation of RNA biosynthetic process
AB684_14040	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AB684_14045	COG0481	GTPase activity
AB684_14055	COG0860	N-Acetylmuramoyl-L-alanine amidase
AB684_14060	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AB684_14065	COG0268	Binds directly to 16S ribosomal RNA
AB684_14070	COG1466	dna polymerase III delta subunit
AB684_14075	COG0658	competence protein
AB684_14075	COG2333	competence protein COMEC
AB684_14080	COG2131	deaminase
AB684_14085	COG1596	polysaccharide export
AB684_14085	COG1555	photosystem II stabilization
AB684_14090	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AB684_14095	COG2226	methyltransferase
AB684_14100	COG0799	negative regulation of ribosome biogenesis
AB684_14105	COG1713	HD superfamily hydrolase involved in NAD metabolism
AB684_14110	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AB684_14115	COG1534	Rna-binding protein
AB684_14120	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AB684_14125	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AB684_14130	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
AB684_14140	COG2755	lipolytic protein G-D-S-L family
AB684_14145	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AB684_14150	COG5609	conserved protein (DUF2294)
AB684_14155	COG3383	formate dehydrogenase (NAD+) activity
AB684_14160	COG2427	Protein of unknown function (DUF1641)
AB684_14195	COG0860	N-Acetylmuramoyl-L-alanine amidase
AB684_14235	COG1136	(ABC) transporter
AB684_14240	COG0577	efflux transmembrane transporter activity
AB684_14290	COG1191	sigma factor activity
AB684_14315	COG2197	response regulator
AB684_14320	COG4585	Histidine kinase
AB684_14325	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_14330	COG0730	response to heat
AB684_14335	COG0425	Belongs to the sulfur carrier protein TusA family
AB684_14340	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AB684_14340	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AB684_14345	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AB684_14345	COG0425	Belongs to the sulfur carrier protein TusA family
AB684_14350	COG2210	Belongs to the sulfur carrier protein TusA family
AB684_14355	COG1937	Protein conserved in bacteria
AB684_14385	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AB684_14390	COG0113	porphobilinogen synthase activity
AB684_14395	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AB684_14400	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
AB684_14405	COG1733	regulation of RNA biosynthetic process
AB684_14410	COG3239	Fatty acid desaturase
AB684_14415	COG4585	Histidine kinase
AB684_14420	COG2197	response regulator
AB684_14425	COG0492	ferredoxin-NADP+ reductase activity
AB684_14430	COG0747	negative chemotaxis
AB684_14435	COG0601	transmembrane transport
AB684_14445	COG0444	Belongs to the ABC transporter superfamily
AB684_14450	COG4608	Belongs to the ABC transporter superfamily
AB684_14470	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_14485	COG2124	cytochrome p450
AB684_14490	COG0730	response to heat
AB684_14505	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_14510	COG1621	beta-fructofuranosidase activity
AB684_14515	COG3716	PTS system mannose fructose sorbose family IID component
AB684_14520	COG3715	PTS system
AB684_14525	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_14530	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_14535	COG3933	PFAM sigma-54 factor interaction domain-containing protein
AB684_14535	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AB684_14555	COG2169	Transcriptional regulator
AB684_14560	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AB684_14565	COG0656	L-ascorbic acid biosynthetic process
AB684_14570	COG2814	Major facilitator Superfamily
AB684_14575	COG1733	regulation of RNA biosynthetic process
AB684_14580	COG3340	Belongs to the peptidase S51 family
AB684_14585	COG1587	Uroporphyrinogen-III synthase
AB684_14595	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AB684_14600	COG0583	DNA-binding transcription factor activity
AB684_14605	COG2814	Major facilitator Superfamily
AB684_14615	COG2124	cytochrome p450
AB684_14615	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AB684_14620	COG1309	transcriptional regulator
AB684_14625	COG1404	Belongs to the peptidase S8 family
AB684_14630	COG2226	methyltransferase
AB684_14645	COG0626	cystathionine gamma-synthase activity
AB684_14650	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AB684_14655	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AB684_14660	COG2226	methyltransferase
AB684_14675	COG0768	penicillin binding
AB684_14680	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AB684_14685	COG0572	uridine kinase
AB684_14705	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AB684_14710	COG3906	Belongs to the UPF0473 family
AB684_14715	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AB684_14720	COG4472	Bacterial protein of unknown function (DUF965)
AB684_14725	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AB684_14730	COG0628	permease
AB684_14740	COG3881	PFAM PRC-barrel domain
AB684_14745	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AB684_14750	COG0457	Tetratricopeptide repeat
AB684_14755	COG0482	sulfurtransferase activity
AB684_14760	COG1104	cysteine desulfurase activity
AB684_14765	COG1959	2 iron, 2 sulfur cluster binding
AB684_14770	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AB684_14775	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AB684_14785	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AB684_14790	COG0124	histidyl-tRNA synthetase
AB684_14795	COG3103	Sh3 type 3 domain protein
AB684_14795	COG4991	sh3 domain protein
AB684_14795	COG0860	N-Acetylmuramoyl-L-alanine amidase
AB684_14800	COG1490	D-aminoacyl-tRNA deacylase activity
AB684_14805	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AB684_14810	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AB684_14815	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
AB684_14815	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AB684_14820	COG5416	Lipopolysaccharide assembly protein A domain
AB684_14825	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AB684_14825	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AB684_14835	COG2244	polysaccharide biosynthetic process
AB684_14840	COG2323	membrane
AB684_14850	COG1862	Preprotein translocase
AB684_14855	COG0343	queuine tRNA-ribosyltransferase activity
AB684_14860	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
AB684_14870	COG2255	four-way junction helicase activity
AB684_14875	COG0632	four-way junction helicase activity
AB684_14885	COG2112	serine threonine protein kinase
AB684_14895	COG2318	DinB family
AB684_14900	COG4195	phage-related replication protein
AB684_14915	COG0217	transcriptional regulatory protein
AB684_14925	COG1388	LysM domain
AB684_14930	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AB684_14935	COG0157	Belongs to the NadC ModD family
AB684_14940	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AB684_14945	COG1104	cysteine desulfurase activity
AB684_14950	COG1827	regulation of RNA biosynthetic process
AB684_14955	COG0077	Prephenate dehydratase
AB684_14960	COG4492	Belongs to the UPF0735 family
AB684_14965	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AB684_14970	COG3290	protein histidine kinase activity
AB684_14975	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AB684_14980	COG2868	ribosomal protein
AB684_14985	COG0261	This protein binds to 23S rRNA in the presence of protein L20
AB684_14990	COG1994	Peptidase M50
AB684_14995	COG0739	heme binding
AB684_15000	COG3832	glyoxalase III activity
AB684_15005	COG0640	Transcriptional regulator
AB684_15010	COG2894	cell division
AB684_15015	COG0850	regulation of cytokinetic process
AB684_15020	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AB684_15025	COG1792	Involved in formation and maintenance of cell shape
AB684_15030	COG1077	Cell shape determining protein MreB Mrl
AB684_15035	COG2003	Belongs to the UPF0758 family
AB684_15040	COG0424	maF-like protein
AB684_15050	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
AB684_15055	COG0285	dihydrofolate synthase activity
AB684_15060	COG0525	valine-tRNA ligase activity
AB684_15070	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AB684_15075	COG1388	LysM domain
AB684_15080	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AB684_15085	COG0113	porphobilinogen synthase activity
AB684_15090	COG1587	Uroporphyrinogen-III synthase
AB684_15095	COG0181	hydroxymethylbilane synthase activity
AB684_15100	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AB684_15105	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
AB684_15115	COG0218	Necessary for normal cell division and for the maintenance of normal septation
AB684_15120	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AB684_15125	COG0470	DNA polymerase III
AB684_15125	COG1067	ATP-dependent peptidase activity
AB684_15130	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AB684_15135	COG0544	peptidyl-prolyl cis-trans isomerase activity
AB684_15140	COG0457	Tetratricopeptide repeat
AB684_15140	COG1477	protein flavinylation
AB684_15145	COG0066	3-isopropylmalate dehydratase activity
AB684_15150	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
AB684_15155	COG0473	3-isopropylmalate dehydrogenase activity
AB684_15160	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AB684_15165	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
AB684_15170	COG0440	acetolactate synthase activity
AB684_15175	COG0028	Belongs to the TPP enzyme family
AB684_15185	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AB684_15195	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AB684_15215	COG5518	Phage portal protein
AB684_15265	COG2801	Transposase and inactivated derivatives
AB684_15280	COG5444	nuclease activity
AB684_15285	COG0457	Tetratricopeptide repeat
AB684_15300	COG0622	Phosphoesterase
AB684_15305	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AB684_15310	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
AB684_15315	COG5401	PFAM Sporulation and spore germination
AB684_15320	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AB684_15325	COG1846	Transcriptional regulator
AB684_15330	COG2197	response regulator
AB684_15335	COG4221	oxidoreductase activity
AB684_15340	COG0824	Thioesterase
AB684_15345	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AB684_15350	COG1053	succinate dehydrogenase
AB684_15355	COG2009	succinate dehydrogenase
AB684_15360	COG1719	4-vinyl reductase, 4VR
AB684_15365	COG0527	aspartate kinase activity
AB684_15370	COG0322	excinuclease ABC activity
AB684_15375	COG3118	belongs to the thioredoxin family
AB684_15380	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
AB684_15385	COG2086	electron transfer activity
AB684_15390	COG1024	Enoyl-CoA hydratase
AB684_15395	COG1309	transcriptional regulator
AB684_15400	COG0318	PFAM AMP-dependent synthetase and ligase
AB684_15405	COG3766	membrane
AB684_15410	COG1193	negative regulation of DNA recombination
AB684_15415	COG1796	DNA polymerase
AB684_15415	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AB684_15420	COG1286	toxin biosynthetic process
AB684_15425	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
AB684_15430	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AB684_15450	COG2801	Transposase and inactivated derivatives
AB684_15465	COG1137	ATPase activity
AB684_15480	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AB684_15480	COG0072	phenylalanine-tRNA ligase activity
AB684_15485	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AB684_15490	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AB684_15500	COG1966	Carbon starvation protein
AB684_15515	COG0395	ABC-type sugar transport system, permease component
AB684_15520	COG1175	transmembrane transport
AB684_15525	COG1653	transport
AB684_15530	COG0371	Dehydrogenase
AB684_15535	COG0235	Class ii aldolase
AB684_15540	COG1069	ribulokinase activity
AB684_15545	COG2160	L-arabinose isomerase activity
AB684_15550	COG3507	Belongs to the glycosyl hydrolase 43 family
AB684_15555	COG1363	Peptidase, m42
AB684_15565	COG3326	Membrane
AB684_15570	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AB684_15575	COG0291	Belongs to the bacterial ribosomal protein bL35 family
AB684_15580	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AB684_15585	COG1346	cytolysis
AB684_15595	COG3540	Alkaline phosphatase
AB684_15600	COG3279	Response regulator of the LytR AlgR family
AB684_15605	COG3275	phosphorelay sensor kinase activity
AB684_15620	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AB684_15630	COG0398	Pfam SNARE associated Golgi protein
AB684_15635	COG1484	DNA-dependent DNA replication
AB684_15640	COG3611	Membrane attachment protein
AB684_15645	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AB684_15660	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
AB684_15665	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AB684_15670	COG3866	Pectate lyase
AB684_15675	COG0237	dephospho-CoA kinase activity
AB684_15680	COG1971	Probably functions as a manganese efflux pump
AB684_15685	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AB684_15690	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AB684_15690	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AB684_15695	COG5002	protein histidine kinase activity
AB684_15700	COG0745	RESPONSE REGULATOR receiver
AB684_15705	COG0039	L-malate dehydrogenase activity
AB684_15710	COG0538	isocitrate dehydrogenase activity
AB684_15715	COG0372	Belongs to the citrate synthase family
AB684_15720	COG2707	UPF0756 membrane protein
AB684_15725	COG0628	permease
AB684_15730	COG3030	protein affecting phage T7 exclusion by the F plasmid
AB684_15740	COG0205	6-phosphofructokinase activity
AB684_15745	COG0825	malonyl-CoA metabolic process
AB684_15750	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AB684_15755	COG0281	malic enzyme
AB684_15760	COG0587	DNA-directed DNA polymerase activity
AB684_15780	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
AB684_15790	COG4109	DRTGG domain
AB684_15795	COG1695	Transcriptional regulator
AB684_15800	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AB684_15805	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_15810	COG0165	Argininosuccinate lyase
AB684_15815	COG0137	argininosuccinate synthase activity
AB684_15820	COG0521	Mo-molybdopterin cofactor biosynthetic process
AB684_15825	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AB684_15830	COG0827	DNA restriction-modification system
AB684_15835	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AB684_15840	COG3874	Sporulation protein YtfJ
AB684_15850	COG1714	RDD family
AB684_15855	COG0616	signal peptide processing
AB684_15860	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AB684_15865	COG1566	PFAM secretion protein HlyD family protein
AB684_15870	COG0477	Major facilitator Superfamily
AB684_15880	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AB684_15890	COG0301	tRNA thio-modification
AB684_15895	COG1104	cysteine desulfurase activity
AB684_15900	COG1114	Component of the transport system for branched-chain amino acids
AB684_15905	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
AB684_15910	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AB684_15915	COG1309	transcriptional regulator
AB684_15920	COG1956	GAF domain-containing protein
AB684_15925	COG2199	diguanylate cyclase activity
AB684_15925	COG2203	Gaf domain
AB684_15930	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AB684_15945	COG3152	Membrane
AB684_15950	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AB684_15955	COG1522	sequence-specific DNA binding
AB684_15960	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AB684_15965	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AB684_15970	COG0454	-acetyltransferase
AB684_15975	COG0517	IMP dehydrogenase activity
AB684_15980	COG0123	including yeast histone deacetylase and acetoin utilization protein
AB684_15985	COG1360	Flagellar Motor Protein
AB684_15990	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AB684_15995	COG1609	Transcriptional regulator
AB684_16000	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
AB684_16000	COG1605	Chorismate mutase
AB684_16010	COG3118	belongs to the thioredoxin family
AB684_16015	COG4980	gas vesicle protein
AB684_16020	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
AB684_16025	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AB684_16030	COG1674	ftsk spoiiie
AB684_16035	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AB684_16040	COG4848	Belongs to the UPF0354 family
AB684_16045	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_16055	COG1363	Peptidase, m42
AB684_16060	COG5584	Small secreted protein
AB684_16065	COG0281	malic enzyme
AB684_16070	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AB684_16075	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AB684_16085	COG0510	thiamine kinase activity
AB684_16090	COG1523	belongs to the glycosyl hydrolase 13 family
AB684_16095	COG1597	lipid kinase activity
AB684_16105	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AB684_16110	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AB684_16125	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AB684_16130	COG2252	PERMEase
AB684_16135	COG1349	DNA-binding transcription factor activity
AB684_16140	COG1187	pseudouridine synthase activity
AB684_16145	COG2244	polysaccharide biosynthetic process
AB684_16150	COG2081	HI0933 family
AB684_16155	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AB684_16170	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AB684_16175	COG0457	Tetratricopeptide repeat
AB684_16185	COG5578	integral membrane protein
AB684_16190	COG0673	inositol 2-dehydrogenase activity
AB684_16195	COG1653	transport
AB684_16200	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
AB684_16205	COG4209	transmembrane transport
AB684_16210	COG2207	Transcriptional regulator
AB684_16215	COG1653	transport
AB684_16220	COG0395	ABC-type sugar transport system, permease component
AB684_16225	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AB684_16230	COG1073	alpha beta
AB684_16240	COG0583	DNA-binding transcription factor activity
AB684_16245	COG0346	lactoylglutathione lyase activity
AB684_16250	COG0495	leucyl-tRNA aminoacylation
AB684_16260	COG2814	Major facilitator Superfamily
AB684_16270	COG2433	Pfam Transposase IS66
AB684_16275	COG0577	efflux transmembrane transporter activity
AB684_16280	COG1136	(ABC) transporter
AB684_16290	COG1131	(ABC) transporter
AB684_16295	COG1725	Transcriptional regulator
AB684_16305	COG1242	4 iron, 4 sulfur cluster binding
AB684_16310	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
AB684_16315	COG1301	dicarboxylic acid transport
AB684_16325	COG2267	carboxylic ester hydrolase activity
AB684_16330	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AB684_16335	COG0671	phosphoesterase, PA-phosphatase related
AB684_16340	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AB684_16340	COG0438	transferase activity, transferring glycosyl groups
AB684_16345	COG0367	asparagine synthase
AB684_16350	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AB684_16355	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
AB684_16360	COG1301	dicarboxylic acid transport
AB684_16370	COG1506	peptidase
AB684_16375	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AB684_16380	COG1116	anion transmembrane transporter activity
AB684_16385	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AB684_16390	COG0494	nUDIX hydrolase
AB684_16400	COG4824	toxin secretion phage lysis holin
AB684_16405	COG0783	Belongs to the Dps family
AB684_16415	COG1854	S-ribosylhomocysteine lyase activity
AB684_16420	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AB684_16425	COG0288	reversible hydration of carbon dioxide
AB684_16430	COG0523	cobalamin synthesis protein
AB684_16435	COG0803	Belongs to the bacterial solute-binding protein 9 family
AB684_16440	COG0254	rRNA binding
AB684_16445	COG1271	oxidase subunit
AB684_16450	COG1294	oxidase, subunit
AB684_16460	COG4948	Mandelate Racemase Muconate Lactonizing
AB684_16465	COG0318	PFAM AMP-dependent synthetase and ligase
AB684_16470	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
AB684_16475	COG0596	Alpha beta hydrolase
AB684_16480	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
AB684_16485	COG1169	isochorismate synthase
AB684_16490	COG1575	Belongs to the MenA family. Type 1 subfamily
AB684_16495	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AB684_16510	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AB684_16515	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AB684_16520	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AB684_16645	COG1609	Transcriptional regulator
AB684_16650	COG3859	Proton-coupled thiamine transporter YuaJ
AB684_16655	COG3764	Sortase (surface protein transpeptidase)
AB684_16670	COG0457	Tetratricopeptide repeat
AB684_16675	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
AB684_16680	COG0569	domain protein
AB684_16685	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AB684_16695	COG2318	DinB family
AB684_16705	COG1454	alcohol dehydrogenase
AB684_16715	COG1510	regulation of RNA biosynthetic process
AB684_16725	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
AB684_16730	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AB684_16735	COG2140	Oxalate decarboxylase
AB684_16765	COG1397	ADP-ribosylglycohydrolase
AB684_16800	COG3478	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
AB684_16810	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AB684_16815	COG0726	polysaccharide deacetylase
AB684_16820	COG1408	metallophosphoesterase
AB684_16825	COG1968	undecaprenyl-diphosphatase activity
AB684_16830	COG0628	permease
AB684_16835	COG0673	inositol 2-dehydrogenase activity
AB684_16840	COG0693	protein deglycase activity
AB684_16845	COG0840	transmembrane signaling receptor activity
AB684_16850	COG0840	transmembrane signaling receptor activity
AB684_16855	COG0840	transmembrane signaling receptor activity
AB684_16865	COG2070	2-Nitropropane dioxygenase
AB684_16870	COG0432	Pfam Uncharacterised protein family UPF0047
AB684_16875	COG0366	Alpha amylase catalytic
AB684_16890	COG5297	Belongs to the glycosyl hydrolase family 6
AB684_16895	COG1253	flavin adenine dinucleotide binding
AB684_16900	COG2738	Putative neutral zinc metallopeptidase
AB684_16910	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AB684_16920	COG2323	membrane
AB684_16925	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
AB684_16935	COG0166	Belongs to the GPI family
AB684_16940	COG1979	alcohol dehydrogenase
AB684_16945	COG2155	Conserved Protein
AB684_16950	COG1098	S1 RNA binding domain
AB684_16955	COG0436	Aminotransferase
AB684_16960	COG1522	sequence-specific DNA binding
AB684_16965	COG2267	carboxylic ester hydrolase activity
AB684_16980	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AB684_16995	COG5018	Exonuclease
AB684_17000	COG2814	Major facilitator Superfamily
AB684_17005	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AB684_17010	COG3011	Protein conserved in bacteria
AB684_17020	COG3290	protein histidine kinase activity
AB684_17025	COG4565	transcriptional regulatory protein
AB684_17030	COG1183	phosphatidylcholine synthase activity
AB684_17035	COG0586	Pfam SNARE associated Golgi protein
AB684_17040	COG0688	phosphatidylethanolamine metabolic process
AB684_17045	COG3493	citrate carrier protein
AB684_17055	COG2111	Na H antiporter
AB684_17055	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AB684_17060	COG2111	Na H antiporter
AB684_17065	COG1006	Multisubunit Na H antiporter MnhC subunit
AB684_17070	COG0651	ATP synthesis coupled electron transport
AB684_17075	COG1863	multisubunit Na H antiporter MnhE subunit
AB684_17080	COG2212	antiporter activity
AB684_17085	COG1320	monovalent cation:proton antiporter activity
AB684_17090	COG2050	protein possibly involved in aromatic compounds catabolism
AB684_17095	COG2197	response regulator
AB684_17100	COG4585	Histidine kinase
AB684_17130	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
AB684_17135	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AB684_17140	COG1335	isochorismatase
AB684_17145	COG5506	Protein of unknown function (DUF1694)
AB684_17160	COG0628	permease
AB684_17165	COG1959	2 iron, 2 sulfur cluster binding
AB684_17180	COG1418	mRNA catabolic process
AB684_17185	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_17195	COG1511	domain protein
AB684_17200	COG1674	ftsk spoiiie
AB684_17200	COG0433	COG0433 Predicted ATPase
AB684_17205	COG4499	WXG100 protein secretion system (Wss), protein YukC
AB684_17210	COG5417	Belongs to the EsaB family
AB684_17215	COG4842	Belongs to the WXG100 family
AB684_17220	COG1115	amino acid carrier protein
AB684_17225	COG2508	Transcriptional regulator
AB684_17225	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
AB684_17230	COG0686	Belongs to the AlaDH PNT family
AB684_17240	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AB684_17245	COG1268	BioY protein
AB684_17250	COG2056	Na+-H+ antiporter family
AB684_17255	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AB684_17260	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
AB684_17265	COG3584	3D domain protein
AB684_17275	COG1252	NADH dehydrogenase
AB684_17280	COG0492	ferredoxin-NADP+ reductase activity
AB684_17295	COG0456	acetyltransferase
AB684_17300	COG0316	Belongs to the HesB IscA family
AB684_17305	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AB684_17310	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AB684_17315	COG4844	belongs to the
AB684_17320	COG1252	NADH dehydrogenase
AB684_17325	COG5646	InterPro IPR014922
AB684_17335	COG0457	Tetratricopeptide repeat
AB684_17340	COG3479	Phenolic acid decarboxylase
AB684_17350	COG4837	Protein of unknown function (DUF1462)
AB684_17355	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
AB684_17360	COG4946	Tricorn protease homolog
AB684_17360	COG1506	peptidase
AB684_17360	COG0823	Involved in the tonB-independent uptake of proteins
AB684_17365	COG0083	homoserine kinase activity
AB684_17370	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AB684_17375	COG0460	homoserine dehydrogenase
AB684_17385	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AB684_17390	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AB684_17395	COG0647	UMP catabolic process
AB684_17400	COG2445	Protein of unknown function DUF86
AB684_17405	COG4470	Protein conserved in bacteria
AB684_17420	COG0739	heme binding
AB684_17425	COG0733	neurotransmitter:sodium symporter activity
AB684_17435	COG3377	Domain of unknown function (DUF1805)
AB684_17440	COG0737	Belongs to the 5'-nucleotidase family
AB684_17445	COG0730	response to heat
AB684_17450	COG1801	Protein of unknown function DUF72
AB684_17460	COG3226	Transcriptional regulator
AB684_17470	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AB684_17475	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AB684_17480	COG2508	Transcriptional regulator
AB684_17485	COG2814	Major facilitator Superfamily
AB684_17490	COG1288	antiporter activity
AB684_17495	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AB684_17500	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AB684_17505	COG2356	endonuclease I
AB684_17515	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AB684_17530	COG0457	Tetratricopeptide repeat
AB684_17535	COG0719	Fe-S assembly protein
AB684_17540	COG0822	iron-sulfur transferase activity
AB684_17545	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AB684_17550	COG0719	Fe-S assembly protein
AB684_17555	COG0396	ATPase activity
AB684_17565	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AB684_17570	COG1464	Belongs to the NlpA lipoprotein family
AB684_17575	COG2011	ABC-type metal ion transport system permease component
AB684_17580	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AB684_17590	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AB684_17595	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AB684_17605	COG0509	glycine decarboxylation via glycine cleavage system
AB684_17610	COG1393	Belongs to the ArsC family
AB684_17615	COG1960	acyl-CoA dehydrogenase activity
AB684_17620	COG0183	Belongs to the thiolase family
AB684_17625	COG1250	3-hydroxyacyl-CoA dehydrogenase
AB684_17625	COG1024	Enoyl-CoA hydratase
AB684_17635	COG5577	PFAM Coat F domain
AB684_17650	COG1120	ATPase activity
AB684_17655	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_17660	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_17665	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AB684_17680	COG1686	Belongs to the peptidase S11 family
AB684_17685	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_17690	COG0783	Belongs to the Dps family
AB684_17695	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AB684_17700	COG0745	RESPONSE REGULATOR receiver
AB684_17705	COG2205	protein histidine kinase activity
AB684_17705	COG2770	Histidine kinase
AB684_17710	COG1309	transcriptional regulator
AB684_17715	COG0114	fumarate hydratase activity
AB684_17720	COG0697	spore germination
AB684_17725	COG0814	amino acid
AB684_17740	COG2197	response regulator
AB684_17745	COG4585	Histidine kinase
AB684_17750	COG4758	membrane
AB684_17760	COG1842	Phage shock protein A
AB684_17765	COG4758	membrane
AB684_17770	COG4677	pectinesterase activity
AB684_17775	COG2096	Adenosyltransferase
AB684_17780	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_17785	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AB684_17800	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AB684_17805	COG1120	ATPase activity
AB684_17810	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_17815	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AB684_17820	COG1802	Transcriptional regulator
AB684_17825	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_17830	COG2258	MOSC domain
AB684_17835	COG0583	DNA-binding transcription factor activity
AB684_17845	COG2721	sulfolactate sulfo-lyase activity
AB684_17850	COG0246	Mannitol dehydrogenase
AB684_17855	COG1609	Transcriptional regulator
AB684_17860	COG2211	Major facilitator Superfamily
AB684_17865	COG1904	glucuronate isomerase
AB684_17870	COG2205	protein histidine kinase activity
AB684_17875	COG0745	RESPONSE REGULATOR receiver
AB684_17880	COG1120	ATPase activity
AB684_17885	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_17890	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_17895	COG0531	amino acid
AB684_17905	COG1988	membrane-bound metal-dependent
AB684_17910	COG1368	sulfuric ester hydrolase activity
AB684_17915	COG2814	Major facilitator Superfamily
AB684_17920	COG0656	L-ascorbic acid biosynthetic process
AB684_17925	COG1940	carbohydrate kinase activity
AB684_17930	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AB684_17940	COG3973	AAA domain
AB684_17945	COG2860	membrane
AB684_17950	COG0456	acetyltransferase
AB684_17950	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AB684_17955	COG0456	acetyltransferase
AB684_17960	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
AB684_17965	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AB684_17970	COG2217	Heavy metal translocating P-type atpase
AB684_17975	COG1653	transport
AB684_17980	COG1175	transmembrane transport
AB684_17985	COG0395	ABC-type sugar transport system, permease component
AB684_17990	COG1501	Belongs to the glycosyl hydrolase 31 family
AB684_17995	COG1472	Belongs to the glycosyl hydrolase 3 family
AB684_18000	COG1121	(ABC) transporter
AB684_18005	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AB684_18010	COG0803	Belongs to the bacterial solute-binding protein 9 family
AB684_18030	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_18030	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AB684_18030	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AB684_18045	COG2217	Heavy metal translocating P-type atpase
AB684_18050	COG2608	mercury ion transmembrane transporter activity
AB684_18055	COG1937	Protein conserved in bacteria
AB684_18060	COG0693	protein deglycase activity
AB684_18065	COG1349	DNA-binding transcription factor activity
AB684_18070	COG1070	Carbohydrate kinase
AB684_18075	COG4952	isomerase
AB684_18085	COG3347	Dehydrogenase
AB684_18085	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_18090	COG2814	Major facilitator Superfamily
AB684_18095	COG2814	Major facilitator Superfamily
AB684_18105	COG2124	cytochrome p450
AB684_18115	COG1846	Transcriptional regulator
AB684_18125	COG0673	inositol 2-dehydrogenase activity
AB684_18130	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AB684_18145	COG1191	sigma factor activity
AB684_18150	COG2140	Oxalate decarboxylase
AB684_18190	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
AB684_18195	COG0557	exoribonuclease II activity
AB684_18200	COG1647	Serine aminopeptidase, S33
AB684_18205	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AB684_18210	COG2002	toxin-antitoxin pair type II binding
AB684_18215	COG1476	TRANSCRIPTIONal
AB684_18220	COG1396	sequence-specific DNA binding
AB684_18225	COG1396	sequence-specific DNA binding
AB684_18230	COG1174	glycine betaine transport
AB684_18235	COG1732	Glycine betaine
AB684_18240	COG1174	glycine betaine transport
AB684_18245	COG1125	glycine betaine transport
AB684_18245	COG0517	IMP dehydrogenase activity
AB684_18250	COG1510	regulation of RNA biosynthetic process
AB684_18255	COG2095	MarC family integral membrane protein
AB684_18265	COG4640	response to antibiotic
AB684_18270	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AB684_18280	COG0693	protein deglycase activity
AB684_18285	COG0148	phosphopyruvate hydratase activity
AB684_18290	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AB684_18295	COG0149	triose-phosphate isomerase activity
AB684_18300	COG0126	phosphoglycerate kinase activity
AB684_18305	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AB684_18310	COG2390	Transcriptional regulator
AB684_18315	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AB684_18320	COG1113	amino acid transport
AB684_18340	COG1556	Lactate utilization protein
AB684_18345	COG1139	Iron-sulfur cluster binding protein
AB684_18350	COG0247	lactate metabolic process
AB684_18355	COG2186	Transcriptional regulator
AB684_18360	COG1620	l-lactate permease
AB684_18365	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
AB684_18375	COG5039	Polysaccharide pyruvyl transferase
AB684_18380	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AB684_18385	COG0110	maltose O-acetyltransferase activity
AB684_18390	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AB684_18395	COG2244	polysaccharide biosynthetic process
AB684_18400	COG1216	Glycosyl transferase, family 2
AB684_18405	COG5039	Polysaccharide pyruvyl transferase
AB684_18410	COG1216	Glycosyl transferase, family 2
AB684_18420	COG0438	transferase activity, transferring glycosyl groups
AB684_18425	COG1215	transferase activity, transferring glycosyl groups
AB684_18430	COG0438	transferase activity, transferring glycosyl groups
AB684_18435	COG1086	Polysaccharide biosynthesis protein
AB684_18440	COG0489	protein tyrosine kinase activity
AB684_18445	COG3944	biosynthesis protein
AB684_18450	COG1396	sequence-specific DNA binding
AB684_18455	COG2249	NAD(P)H dehydrogenase (quinone) activity
AB684_18460	COG2271	Major facilitator Superfamily
AB684_18470	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AB684_18485	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AB684_18495	COG1733	regulation of RNA biosynthetic process
AB684_18500	COG1902	pentaerythritol trinitrate reductase activity
AB684_18505	COG1621	beta-fructofuranosidase activity
AB684_18510	COG1621	beta-fructofuranosidase activity
AB684_18525	COG0740	serine-type endopeptidase activity
AB684_18530	COG1611	Belongs to the LOG family
AB684_18535	COG1694	Mazg nucleotide pyrophosphohydrolase
AB684_18545	COG0659	secondary active sulfate transmembrane transporter activity
AB684_18550	COG0288	reversible hydration of carbon dioxide
AB684_18555	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AB684_18560	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AB684_18565	COG0640	Transcriptional regulator
AB684_18575	COG2732	(Barnase) inhibitor
AB684_18580	COG2162	N-hydroxyarylamine O-acetyltransferase activity
AB684_18585	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_18590	COG1481	regulation of sporulation
AB684_18595	COG0391	Required for morphogenesis under gluconeogenic growth conditions
AB684_18600	COG1660	Displays ATPase and GTPase activities
AB684_18605	COG1051	belongs to the nudix hydrolase family
AB684_18615	COG0492	ferredoxin-NADP+ reductase activity
AB684_18620	COG0457	Tetratricopeptide repeat
AB684_18625	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AB684_18630	COG0140	phosphoribosyl-ATP diphosphatase activity
AB684_18630	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AB684_18635	COG0107	imidazoleglycerol-phosphate synthase activity
AB684_18640	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
AB684_18645	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AB684_18650	COG0131	Imidazoleglycerol-phosphate dehydratase
AB684_18655	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AB684_18660	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AB684_18665	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
AB684_18670	COG4990	cell redox homeostasis
AB684_18675	COG5297	Belongs to the glycosyl hydrolase family 6
AB684_18680	COG0110	maltose O-acetyltransferase activity
AB684_18685	COG0546	phosphoglycolate phosphatase activity
AB684_18690	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
AB684_18695	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AB684_18700	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
AB684_18705	COG1846	Transcriptional regulator
AB684_18710	COG2814	Major facilitator Superfamily
AB684_18715	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AB684_18720	COG1950	PFAM Membrane protein of
AB684_18725	COG1983	PspC domain protein
AB684_18730	COG3595	metallopeptidase activity
AB684_18755	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AB684_18760	COG0556	nucleotide-excision repair
AB684_18765	COG4897	Protein conserved in bacteria
AB684_18775	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AB684_18785	COG0793	Belongs to the peptidase S41A family
AB684_18785	COG3409	Peptidoglycan-binding domain 1 protein
AB684_18790	COG0473	3-isopropylmalate dehydrogenase activity
AB684_18795	COG0791	NLP P60 protein
AB684_18795	COG3883	PFAM NLP P60 protein
AB684_18800	COG2177	Part of the ABC transporter FtsEX involved in
AB684_18805	COG2884	Cell division ATP-binding protein ftsE
AB684_18815	COG2010	Cytochrome c
AB684_18820	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AB684_18825	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AB684_18830	COG0653	protein targeting
AB684_18835	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AB684_18850	COG1516	flagellar protein fliS
AB684_18855	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
AB684_18860	COG1334	flagellar protein FlaG
AB684_18865	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AB684_18870	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
AB684_18875	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
AB684_18885	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AB684_18890	COG4786	Flagellar basal body rod
AB684_18890	COG1256	bacterial-type flagellum assembly
AB684_18895	COG3418	PFAM FlgN family protein
AB684_18900	COG2747	anti-sigma28 factor FlgM
AB684_18910	COG1040	competence protein
AB684_18920	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
AB684_18925	COG1307	EDD domain protein, DegV family
AB684_18930	COG2197	response regulator
AB684_18935	COG4585	Histidine kinase
AB684_18940	COG1739	Uncharacterized protein family UPF0029
AB684_18945	COG1316	TRANSCRIPTIONal
AB684_18955	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AB684_18960	COG0438	transferase activity, transferring glycosyl groups
AB684_18965	COG1215	transferase activity, transferring glycosyl groups
AB684_18970	COG3206	protein involved in exopolysaccharide biosynthesis
AB684_18975	COG3307	-O-antigen
AB684_18980	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AB684_18985	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AB684_18990	COG0297	glycogen (starch) synthase activity
AB684_18990	COG0438	transferase activity, transferring glycosyl groups
AB684_18995	COG2244	polysaccharide biosynthetic process
AB684_19005	COG2247	cell wall binding repeat
AB684_19005	COG0860	N-Acetylmuramoyl-L-alanine amidase
AB684_19010	COG2247	cell wall binding repeat
AB684_19010	COG2385	sporulation resulting in formation of a cellular spore
AB684_19020	COG1316	TRANSCRIPTIONal
AB684_19025	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AB684_19030	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AB684_19035	COG1134	teichoic acid transport
AB684_19040	COG1682	transport, permease protein
AB684_19045	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AB684_19045	COG0463	Glycosyl transferase, family 2
AB684_19050	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AB684_19055	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AB684_19060	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
AB684_19065	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AB684_19070	COG4193	domain, Protein
AB684_19075	COG1482	cell wall glycoprotein biosynthetic process
AB684_19095	COG0800	Aldolase
AB684_19100	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AB684_19105	COG1609	Transcriptional regulator
AB684_19110	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
AB684_19115	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_19120	COG1063	alcohol dehydrogenase
AB684_19125	COG2814	Major facilitator Superfamily
AB684_19130	COG1316	TRANSCRIPTIONal
AB684_19135	COG0561	phosphatase activity
AB684_19140	COG0791	NLP P60 protein
AB684_19145	COG2843	Capsule synthesis protein
AB684_19155	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AB684_19160	COG1609	Transcriptional regulator
AB684_19165	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AB684_19170	COG1869	D-ribose catabolic process
AB684_19175	COG1129	ABC transporter
AB684_19180	COG1172	Belongs to the binding-protein-dependent transport system permease family
AB684_19185	COG1879	ABC-type sugar transport system periplasmic component
AB684_19195	COG3527	Alpha-acetolactate decarboxylase
AB684_19200	COG0028	Belongs to the TPP enzyme family
AB684_19205	COG0583	DNA-binding transcription factor activity
AB684_19210	COG2801	Transposase and inactivated derivatives
AB684_19220	COG0405	Gamma-glutamyltransferase
AB684_19225	COG1522	sequence-specific DNA binding
AB684_19230	COG2059	Chromate
AB684_19235	COG2059	Chromate
AB684_19240	COG4464	protein tyrosine phosphatase activity
AB684_19245	COG3944	biosynthesis protein
AB684_19250	COG4715	Zinc finger, swim domain protein
AB684_19255	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AB684_19260	COG0561	phosphatase activity
AB684_19265	COG1349	DNA-binding transcription factor activity
AB684_19275	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_19285	COG3732	PTS system glucitol sorbitol-specific
AB684_19305	COG0629	single-stranded DNA binding
AB684_19320	COG1970	mechanosensitive ion channel activity
AB684_19325	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AB684_19330	COG4786	Flagellar basal body rod
AB684_19335	COG4786	Flagellar basal body rod
AB684_19340	COG1077	Cell shape determining protein MreB Mrl
AB684_19345	COG1609	Transcriptional regulator
AB684_19350	COG1846	Transcriptional regulator
AB684_19355	COG2814	Major facilitator Superfamily
AB684_19360	COG0671	phosphoesterase, PA-phosphatase related
AB684_19365	COG1227	inorganic diphosphatase activity
AB684_19370	COG3546	catalase activity
AB684_19375	COG3361	conserved protein (COG2071)
AB684_19380	COG0517	IMP dehydrogenase activity
AB684_19385	COG0598	Magnesium transport protein CorA
AB684_19390	COG1253	flavin adenine dinucleotide binding
AB684_19395	COG0004	ammonium transporteR
AB684_19400	COG0347	Belongs to the P(II) protein family
AB684_19405	COG0740	serine-type endopeptidase activity
AB684_19415	COG0739	heme binding
AB684_19420	COG1247	-acetyltransferase
AB684_19430	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AB684_19435	COG0477	Major facilitator Superfamily
AB684_19440	COG3251	PFAM MbtH domain protein
AB684_19445	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AB684_19450	COG3433	isochorismatase activity
AB684_19450	COG1535	isochorismatase
AB684_19455	COG1021	2,3-dihydroxybenzoate-AMP ligase
AB684_19460	COG1169	isochorismate synthase
AB684_19465	COG1028	Short-chain dehydrogenase reductase Sdr
AB684_19470	COG2819	hydrolase of the alpha beta superfamily
AB684_19475	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_19480	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AB684_19485	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AB684_19490	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AB684_19490	COG2207	Transcriptional regulator
AB684_19500	COG2910	NAD(P)H-binding
AB684_19505	COG1959	2 iron, 2 sulfur cluster binding
AB684_19510	COG1994	Peptidase M50
AB684_19515	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AB684_19520	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AB684_19530	COG3383	formate dehydrogenase (NAD+) activity
AB684_19535	COG2304	oxidoreductase activity
AB684_19540	COG2304	oxidoreductase activity
AB684_19545	COG2385	sporulation resulting in formation of a cellular spore
AB684_19550	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AB684_19560	COG4836	Membrane
AB684_19565	COG0355	proton-transporting ATP synthase activity, rotational mechanism
AB684_19570	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AB684_19575	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AB684_19580	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AB684_19585	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AB684_19590	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AB684_19595	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AB684_19615	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AB684_19620	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AB684_19625	COG4475	Protein of unknown function (DUF436)
AB684_19630	COG0698	ribose 5-phosphate isomerase
AB684_19635	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AB684_19640	COG1971	Probably functions as a manganese efflux pump
AB684_19645	COG0009	L-threonylcarbamoyladenylate synthase
AB684_19650	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AB684_19660	COG0738	Major facilitator superfamily
AB684_19665	COG0673	inositol 2-dehydrogenase activity
AB684_19670	COG0561	phosphatase activity
AB684_19675	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AB684_19680	COG1609	Transcriptional regulator
AB684_19685	COG2890	protein-(glutamine-N5) methyltransferase activity
AB684_19690	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AB684_19695	COG0346	lactoylglutathione lyase activity
AB684_19700	COG0789	Transcriptional regulator
AB684_19705	COG0679	Auxin Efflux Carrier
AB684_19710	COG0281	malic enzyme
AB684_19715	COG1435	thymidine kinase activity
AB684_19720	COG0254	rRNA binding
AB684_19725	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AB684_19730	COG1494	fructose-1,6-bisphosphatase
AB684_19735	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AB684_19740	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AB684_19745	COG0191	fructose-bisphosphate aldolase activity
AB684_19750	COG2204	response regulator
AB684_19755	COG4821	SIS domain
AB684_19760	COG0504	CTP synthase activity
AB684_19765	COG3343	RNA polymerase activity
AB684_19770	COG1960	acyl-CoA dehydrogenase activity
AB684_19775	COG1960	acyl-CoA dehydrogenase activity
AB684_19780	COG1250	3-hydroxyacyl-CoA dehydrogenase
AB684_19785	COG0183	Belongs to the thiolase family
AB684_19790	COG2181	nitrate reductase activity
AB684_19790	COG0247	lactate metabolic process
AB684_19795	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AB684_19805	COG0018	arginyl-trna synthetase
AB684_19810	COG4506	Protein conserved in bacteria
AB684_19815	COG0010	Belongs to the arginase family
AB684_19820	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
AB684_19835	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AB684_19845	COG1994	Peptidase M50
AB684_19850	COG1942	4-Oxalocrotonate Tautomerase
AB684_19860	COG3465	dGTPase activity
AB684_19865	COG1078	dGTPase activity
AB684_19870	COG4844	belongs to the
AB684_19895	COG2814	Major facilitator Superfamily
AB684_19920	COG1414	Transcriptional regulator
AB684_19930	COG0280	phosphate acetyltransferase
AB684_19950	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AB684_19970	COG1131	(ABC) transporter
AB684_19985	COG2363	Small membrane protein
AB684_19990	COG2233	PERMEase
AB684_20000	COG1012	belongs to the aldehyde dehydrogenase family
AB684_20005	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AB684_20010	COG1216	Glycosyl transferase, family 2
AB684_20015	COG0351	phosphomethylpyrimidine kinase
AB684_20025	COG1621	beta-fructofuranosidase activity
AB684_20030	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_20030	COG1263	PTS System
AB684_20035	COG3711	transcriptional antiterminator
AB684_20045	COG1404	Belongs to the peptidase S8 family
AB684_20055	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AB684_20060	COG0778	Nitroreductase
AB684_20065	COG1473	amidohydrolase
AB684_20070	COG0772	Belongs to the SEDS family
AB684_20075	COG0772	Belongs to the SEDS family
AB684_20100	COG0456	acetyltransferase
AB684_20135	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AB684_20145	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AB684_20150	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AB684_20155	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AB684_20175	COG3162	membrane
AB684_20180	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AB684_20185	COG1070	Carbohydrate kinase
AB684_20190	COG2115	Belongs to the xylose isomerase family
AB684_20200	COG0352	thiamine-phosphate diphosphorylase activity
AB684_20205	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
AB684_20210	COG0583	DNA-binding transcription factor activity
AB684_20225	COG1380	Effector of murein hydrolase LrgA
AB684_20230	COG1346	cytolysis
AB684_20240	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AB684_20245	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
AB684_20250	COG0346	lactoylglutathione lyase activity
AB684_20255	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AB684_20260	COG1442	glycosyl transferase family 8
AB684_20265	COG4585	Histidine kinase
AB684_20270	COG2197	response regulator
AB684_20275	COG2409	Drug exporters of the RND superfamily
AB684_20280	COG5522	Integral membrane protein (intg_mem_TP0381)
AB684_20285	COG2271	Major facilitator Superfamily
AB684_20290	COG4948	Mandelate Racemase Muconate Lactonizing
AB684_20295	COG0800	Aldolase
AB684_20300	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AB684_20310	COG2234	aminopeptidase activity
AB684_20315	COG0477	Major facilitator Superfamily
AB684_20325	COG2357	RelA SpoT domain protein
AB684_20340	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AB684_20345	COG1696	Membrane protein involved in D-alanine export
AB684_20350	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AB684_20355	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
AB684_20360	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AB684_20365	COG2814	Major facilitator Superfamily
AB684_20370	COG1486	melibiose metabolic process
AB684_20375	COG1447	Phosphotransferase system cellobiose-specific component IIA
AB684_20380	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AB684_20385	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AB684_20390	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AB684_20390	COG3711	transcriptional antiterminator
AB684_20395	COG2094	Belongs to the DNA glycosylase MPG family
AB684_20405	COG0372	Belongs to the citrate synthase family
AB684_20410	COG2079	MmgE PrpD family protein
AB684_20415	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
AB684_20430	COG1132	(ABC) transporter
AB684_20435	COG2755	lipolytic protein G-D-S-L family
AB684_20450	COG2814	Major facilitator Superfamily
AB684_20455	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
AB684_20460	COG1131	(ABC) transporter
AB684_20480	COG1595	DNA-templated transcription, initiation
AB684_20485	COG2814	Major facilitator Superfamily
AB684_20490	COG0753	catalase activity
AB684_20495	COG0753	catalase activity
AB684_20500	COG0735	belongs to the Fur family
AB684_20510	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
AB684_20515	COG1131	(ABC) transporter
AB684_20530	COG1131	(ABC) transporter
AB684_20580	COG3866	Pectate lyase
AB684_20585	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AB684_20590	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AB684_20595	COG4988	ABC transporter
AB684_20600	COG1294	oxidase, subunit
AB684_20605	COG1271	oxidase subunit
AB684_20615	COG2116	formate transmembrane transporter activity
AB684_20625	COG0281	malic enzyme
AB684_20630	COG1757	Na H antiporter
AB684_20635	COG1027	Aspartate ammonia-lyase
AB684_20640	COG0252	asparaginase activity
AB684_20645	COG1396	sequence-specific DNA binding
AB684_20650	COG2706	6-phosphogluconolactonase activity
AB684_20655	COG0745	RESPONSE REGULATOR receiver
AB684_20660	COG2205	protein histidine kinase activity
AB684_20670	COG1136	(ABC) transporter
AB684_20675	COG0577	efflux transmembrane transporter activity
AB684_20680	COG5294	Protein conserved in bacteria
AB684_20690	COG0726	polysaccharide deacetylase
AB684_20700	COG1215	transferase activity, transferring glycosyl groups
AB684_20705	COG3493	citrate carrier protein
AB684_20710	COG0584	glycerophosphoryl diester phosphodiesterase
AB684_20725	COG1368	sulfuric ester hydrolase activity
AB684_20735	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AB684_20750	COG2235	arginine
AB684_20755	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AB684_20765	COG0549	Belongs to the carbamate kinase family
AB684_20775	COG2723	6-phospho-beta-galactosidase activity
AB684_20780	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AB684_20790	COG1595	DNA-templated transcription, initiation
AB684_20815	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AB684_20820	COG2195	Cleaves the N-terminal amino acid of tripeptides
AB684_20830	COG1621	beta-fructofuranosidase activity
AB684_20835	COG2223	nitrite transmembrane transporter activity
AB684_20845	COG1609	Transcriptional regulator
AB684_20860	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AB684_20865	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AB684_20870	COG0463	Glycosyl transferase, family 2
AB684_20875	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AB684_20885	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AB684_20890	COG0753	catalase activity
AB684_20890	COG0693	protein deglycase activity
AB684_20900	COG2723	6-phospho-beta-galactosidase activity
AB684_20905	COG2190	(PTS) system
AB684_20905	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_20905	COG1263	PTS System
AB684_20910	COG3711	transcriptional antiterminator
AB684_20915	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AB684_20920	COG1122	ATPase activity
AB684_20925	COG4721	ABC-type cobalt transport system, permease component
AB684_20930	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AB684_20935	COG2224	Isocitrate lyase
AB684_20940	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AB684_20945	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AB684_20950	COG0577	efflux transmembrane transporter activity
AB684_20955	COG1136	(ABC) transporter
AB684_20960	COG2205	protein histidine kinase activity
AB684_20965	COG0745	RESPONSE REGULATOR receiver
AB684_20970	COG2723	6-phospho-beta-galactosidase activity
AB684_20975	COG2190	(PTS) system
AB684_20975	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_20975	COG1263	PTS System
AB684_20985	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
AB684_20990	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AB684_20995	COG3507	Belongs to the glycosyl hydrolase 43 family
AB684_21000	COG0513	Belongs to the DEAD box helicase family
AB684_21030	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
AB684_21035	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AB684_21040	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AB684_21045	COG2390	Transcriptional regulator
AB684_21055	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
AB684_21060	COG3706	GGDEF domain
AB684_21065	COG5298	Protein conserved in bacteria
AB684_21070	COG1215	transferase activity, transferring glycosyl groups
AB684_21080	COG3977	Valine--pyruvate aminotransferase
AB684_21095	COG1181	Belongs to the D-alanine--D-alanine ligase family
AB684_21105	COG0191	fructose-bisphosphate aldolase activity
AB684_21110	COG1082	Xylose isomerase domain protein TIM barrel
AB684_21115	COG1082	Xylose isomerase domain protein TIM barrel
AB684_21120	COG0673	inositol 2-dehydrogenase activity
AB684_21125	COG2814	Major facilitator Superfamily
AB684_21130	COG1082	Xylose isomerase domain protein TIM barrel
AB684_21135	COG3962	Belongs to the TPP enzyme family
AB684_21140	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AB684_21145	COG3718	enzyme involved in inositol metabolism
AB684_21150	COG1012	belongs to the aldehyde dehydrogenase family
AB684_21155	COG1349	DNA-binding transcription factor activity
AB684_21160	COG0667	Aldo Keto reductase
AB684_21170	COG2271	Major facilitator Superfamily
AB684_21175	COG0326	Molecular chaperone. Has ATPase activity
AB684_21180	COG0488	(ABC) transporter
AB684_21185	COG0561	phosphatase activity
AB684_21205	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AB684_21235	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
AB684_21240	COG0577	efflux transmembrane transporter activity
AB684_21245	COG1136	(ABC) transporter
AB684_21250	COG2205	protein histidine kinase activity
AB684_21255	COG0745	RESPONSE REGULATOR receiver
AB684_21265	COG0840	transmembrane signaling receptor activity
AB684_21265	COG5278	phosphoserine phosphatase activity
AB684_21270	COG1115	amino acid carrier protein
AB684_21275	COG0686	Belongs to the AlaDH PNT family
AB684_21280	COG3867	Arabinogalactan endo-beta-1,4-galactanase
AB684_21285	COG1874	Beta-galactosidase
AB684_21290	COG3833	ABC-type maltose transport systems, permease component
AB684_21295	COG1175	transmembrane transport
AB684_21300	COG2182	Extracellular solute-binding protein
AB684_21305	COG1609	Transcriptional regulator
AB684_21315	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AB684_21320	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
AB684_21325	COG1940	carbohydrate kinase activity
AB684_21350	COG1454	alcohol dehydrogenase
AB684_21350	COG1012	belongs to the aldehyde dehydrogenase family
AB684_21355	COG0450	alkyl hydroperoxide reductase
AB684_21360	COG3634	alkyl hydroperoxide reductase activity
AB684_21385	COG1131	(ABC) transporter
AB684_21390	COG0842	Transport permease protein
AB684_21400	COG2197	response regulator
AB684_21425	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AB684_21435	COG0456	acetyltransferase
AB684_21450	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AB684_21455	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AB684_21460	COG4853	Protein conserved in bacteria
AB684_21465	COG4863	YycH protein
AB684_21470	COG5002	protein histidine kinase activity
AB684_21475	COG0745	RESPONSE REGULATOR receiver
AB684_21500	COG1051	belongs to the nudix hydrolase family
AB684_21505	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AB684_21515	COG0305	Participates in initiation and elongation during chromosome replication
AB684_21530	COG2807	transmembrane transport
AB684_21535	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AB684_21540	COG0363	glucosamine-6-phosphate deaminase activity
AB684_21550	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
AB684_21555	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AB684_21555	COG1263	PTS System
AB684_21560	COG0359	binds to the 23S rRNA
AB684_21565	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
AB684_21570	COG4241	membrane
AB684_21575	COG5577	PFAM Coat F domain
AB684_21580	COG0589	response to stress
AB684_21585	COG0659	secondary active sulfate transmembrane transporter activity
AB684_21590	COG2271	Major facilitator Superfamily
AB684_21595	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AB684_21600	COG0629	single-stranded DNA binding
AB684_21605	COG0360	Binds together with S18 to 16S ribosomal RNA
AB684_21610	COG0012	GTP binding
AB684_21620	COG4481	Protein conserved in bacteria
AB684_21625	COG3949	Membrane
AB684_21635	COG1475	DNA binding
AB684_21640	COG1192	Involved in chromosome partitioning
AB684_21645	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AB684_21655	COG1475	DNA binding
AB684_21660	COG0357	Ribosomal RNA small subunit methyltransferase G
AB684_21665	COG0445	tRNA wobble uridine modification
AB684_21670	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AB684_21675	COG1847	R3H domain protein
AB684_21680	COG0706	membrane insertase activity
AB684_21685	COG0594	ribonuclease P activity