AB684_00005 SM00382 ATPases associated with a variety of cellular activities AB684_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AB684_00010 SM00480 DNA polymerase III beta subunit AB684_00030 SM00387 Histidine kinase-like ATPases AB684_00030 SM00433 TopoisomeraseII AB684_00035 SM00434 DNA Topoisomerase IV AB684_00070 SM00116 Domain in cystathionine beta-synthase and other proteins. AB684_00070 SM01240 AB684_00070 AB684_00075 SM00936 Penicillin-binding protein 5, C-terminal domain AB684_00110 SM00860 SMI1 / KNR4 family AB684_00130 SM00257 Lysin motif AB684_00130 SM00636 AB684_00130 AB684_00150 SM00382 ATPases associated with a variety of cellular activities AB684_00160 SM00493 AB684_00160 AB684_00250 SM00465 GIY-YIG type nucleases (URI domain) AB684_00260 SM00966 SpoVT / AbrB like domain AB684_00275 SM01208 AB684_00275 AB684_00280 SM00493 AB684_00280 AB684_00285 SM00650 Ribosomal RNA adenine dimethylases AB684_00330 SM01400 AB684_00330 AB684_00350 SM00487 DEAD-like helicases superfamily AB684_00350 SM00490 helicase superfamily c-terminal domain AB684_00350 SM00982 AB684_00350 AB684_00350 SM01058 CarD-like/TRCF domain AB684_00355 SM00966 SpoVT / AbrB like domain AB684_00370 SM00363 S4 RNA-binding domain AB684_00390 SM00316 Ribosomal protein S1-like RNA-binding domain AB684_00405 SM00331 Sigma factor PP2C-like phosphatases AB684_00405 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AB684_00415 SM00220 Serine/Threonine protein kinases, catalytic domain AB684_00420 SM00977 TilS substrate C-terminal domain AB684_00430 SM00382 ATPases associated with a variety of cellular activities AB684_00480 SM00905 Dihydroneopterin aldolase AB684_00590 SM00382 ATPases associated with a variety of cellular activities AB684_00590 SM01086 C-terminal, D2-small domain, of ClpB protein AB684_00595 SM00382 ATPases associated with a variety of cellular activities AB684_00605 SM00670 Large family of predicted nucleotide-binding domains AB684_00630 SM00840 AB684_00630 AB684_00635 SM00535 Ribonuclease III family AB684_00640 SM00967 RNA 2'-O ribose methyltransferase substrate binding AB684_00660 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AB684_00660 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AB684_00665 SM00649 Ribosomal protein L11/L12 AB684_00695 SM00663 RNA polymerase I subunit A N-terminus AB684_00715 SM00838 Elongation factor G C-terminus AB684_00715 SM00889 Elongation factor G, domain IV AB684_00725 SM01403 AB684_00725 AB684_00745 SM01382 AB684_00745 AB684_00745 SM01383 AB684_00745 AB684_00760 SM00322 K homology RNA-binding domain AB684_00780 SM01374 AB684_00780 AB684_00785 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AB684_00845 SM00316 Ribosomal protein S1-like RNA-binding domain AB684_00865 SM00662 RNA polymerases D AB684_00875 SM00382 ATPases associated with a variety of cellular activities AB684_00880 SM00382 ATPases associated with a variety of cellular activities AB684_00915 SM00646 AB684_00915 AB684_00930 SM01251 AB684_00930 AB684_01095 SM00382 ATPases associated with a variety of cellular activities AB684_01100 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_01105 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB684_01120 SM00382 ATPases associated with a variety of cellular activities AB684_01170 SM00448 cheY-homologous receiver domain AB684_01175 SM00091 PAS domain AB684_01175 SM00387 Histidine kinase-like ATPases AB684_01295 SM00342 helix_turn_helix, arabinose operon control protein AB684_01305 SM00530 Helix-turn-helix XRE-family like proteins AB684_01310 SM00421 helix_turn_helix, Lux Regulon AB684_01320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB684_01320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB684_01370 SM00422 helix_turn_helix, mercury resistance AB684_01405 SM00387 Histidine kinase-like ATPases AB684_01410 SM00448 cheY-homologous receiver domain AB684_01450 SM01130 AB684_01450 AB684_01465 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AB684_01470 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_01470 SM00895 AB684_01470 AB684_01475 SM00858 AB684_01475 AB684_01480 SM00448 cheY-homologous receiver domain AB684_01480 SM00862 Transcriptional regulatory protein, C terminal AB684_01485 SM00387 Histidine kinase-like ATPases AB684_01485 SM00388 His Kinase A (phosphoacceptor) domain AB684_01490 SM00382 ATPases associated with a variety of cellular activities AB684_01520 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_01530 SM00093 SERine Proteinase INhibitors AB684_01545 SM00422 helix_turn_helix, mercury resistance AB684_01585 SM00382 ATPases associated with a variety of cellular activities AB684_01600 SM00448 cheY-homologous receiver domain AB684_01600 SM00862 Transcriptional regulatory protein, C terminal AB684_01605 SM00387 Histidine kinase-like ATPases AB684_01605 SM00388 His Kinase A (phosphoacceptor) domain AB684_01620 SM00822 AB684_01620 AB684_01700 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_01700 SM00866 AB684_01700 AB684_01710 SM00060 Fibronectin type 3 domain AB684_01710 SM00495 Chitin-binding domain type 3 AB684_01710 SM00636 AB684_01710 AB684_01715 SM00636 AB684_01715 AB684_01740 SM00450 Rhodanese Homology Domain AB684_01765 SM00382 ATPases associated with a variety of cellular activities AB684_01840 SM00422 helix_turn_helix, mercury resistance AB684_01920 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_01940 SM00062 Bacterial periplasmic substrate-binding proteins AB684_01950 SM00382 ATPases associated with a variety of cellular activities AB684_01970 SM00219 Tyrosine kinase, catalytic domain AB684_02000 SM00382 ATPases associated with a variety of cellular activities AB684_02015 SM00823 Phosphopantetheine attachment site AB684_02020 SM00823 Phosphopantetheine attachment site AB684_02025 SM00823 Phosphopantetheine attachment site AB684_02040 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_02070 SM00382 ATPases associated with a variety of cellular activities AB684_02090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB684_02090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB684_02095 SM00382 ATPases associated with a variety of cellular activities AB684_02105 SM00062 Bacterial periplasmic substrate-binding proteins AB684_02110 SM00382 ATPases associated with a variety of cellular activities AB684_02210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB684_02210 SM00387 Histidine kinase-like ATPases AB684_02215 SM00342 helix_turn_helix, arabinose operon control protein AB684_02215 SM00448 cheY-homologous receiver domain AB684_02225 SM00382 ATPases associated with a variety of cellular activities AB684_02240 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_02260 SM00710 Parallel beta-helix repeats AB684_02285 SM00422 helix_turn_helix, mercury resistance AB684_02290 SM00382 ATPases associated with a variety of cellular activities AB684_02300 SM00448 cheY-homologous receiver domain AB684_02300 SM00862 Transcriptional regulatory protein, C terminal AB684_02305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB684_02305 SM00387 Histidine kinase-like ATPases AB684_02305 SM00388 His Kinase A (phosphoacceptor) domain AB684_02310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB684_02310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB684_02330 SM00382 ATPases associated with a variety of cellular activities AB684_02365 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB684_02370 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_02410 SM00420 helix_turn_helix, Deoxyribose operon repressor AB684_02420 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AB684_02440 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_02440 SM00895 AB684_02440 AB684_02490 SM00861 Transketolase, pyrimidine binding domain AB684_02515 SM00796 Allophanate hydrolase subunit 1 AB684_02520 SM00797 Allophanate hydrolase subunit 2 AB684_02525 SM00346 helix_turn_helix isocitrate lyase regulation AB684_02595 SM00344 helix_turn_helix ASNC type AB684_02600 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AB684_02600 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AB684_02600 SM00493 AB684_02600 AB684_02685 SM00382 ATPases associated with a variety of cellular activities AB684_02735 SM00487 DEAD-like helicases superfamily AB684_02735 SM00490 helicase superfamily c-terminal domain AB684_02760 SM01005 Alanine racemase, C-terminal domain AB684_02785 SM00387 Histidine kinase-like ATPases AB684_02790 SM00331 Sigma factor PP2C-like phosphatases AB684_02800 SM00387 Histidine kinase-like ATPases AB684_02810 SM00331 Sigma factor PP2C-like phosphatases AB684_02815 SM00316 Ribosomal protein S1-like RNA-binding domain AB684_02815 SM00732 Likely ribonuclease with RNase H fold. AB684_02830 SM00731 SprT homologues. AB684_02880 SM00530 Helix-turn-helix XRE-family like proteins AB684_02890 SM00357 Cold shock protein domain AB684_02895 SM00829 Enoylreductase AB684_02910 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_03005 SM00448 cheY-homologous receiver domain AB684_03005 SM00862 Transcriptional regulatory protein, C terminal AB684_03085 SM00382 ATPases associated with a variety of cellular activities AB684_03095 SM00881 CoA binding domain AB684_03120 SM00883 Chaperonin 10 Kd subunit AB684_03250 SM00530 Helix-turn-helix XRE-family like proteins AB684_03275 SM00420 helix_turn_helix, Deoxyribose operon repressor AB684_03290 SM00642 Alpha-amylase domain AB684_03295 SM00354 helix_turn _helix lactose operon repressor AB684_03300 SM00642 Alpha-amylase domain AB684_03330 SM00642 Alpha-amylase domain AB684_03340 SM00363 S4 RNA-binding domain AB684_03345 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_03410 SM00342 helix_turn_helix, arabinose operon control protein AB684_03410 SM00871 Bacterial transcription activator, effector binding domain AB684_03445 SM00460 Transglutaminase/protease-like homologues AB684_03480 SM01001 AIR carboxylase AB684_03490 SM00998 Adenylosuccinate lyase C-terminus AB684_03505 SM01211 AB684_03505 AB684_03530 SM00798 AICARFT/IMPCHase bienzyme AB684_03530 SM00851 MGS-like domain AB684_03535 SM01209 AB684_03535 AB684_03535 SM01210 AB684_03535 AB684_03595 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB684_03595 SM00292 breast cancer carboxy-terminal domain AB684_03595 SM00532 Ligase N family AB684_03675 SM00845 GatB domain AB684_03720 SM00046 Diacylglycerol kinase catalytic domain (presumed) AB684_03745 SM01061 CAT RNA binding domain AB684_03750 SM00028 Tetratricopeptide repeats AB684_03775 SM00530 Helix-turn-helix XRE-family like proteins AB684_03790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB684_03800 SM00382 ATPases associated with a variety of cellular activities AB684_03820 SM00833 Cobalamin synthesis protein cobW C-terminal domain AB684_03845 SM00729 Elongator protein 3, MiaB family, Radical SAM AB684_03845 SM00876 Biotin and Thiamin Synthesis associated domain AB684_03860 SM00422 helix_turn_helix, mercury resistance AB684_03870 SM00382 ATPases associated with a variety of cellular activities AB684_03875 SM00487 DEAD-like helicases superfamily AB684_03875 SM00490 helicase superfamily c-terminal domain AB684_03880 SM00829 Enoylreductase AB684_03910 SM00849 Metallo-beta-lactamase superfamily AB684_03915 SM00849 Metallo-beta-lactamase superfamily AB684_03920 SM00631 AB684_03920 AB684_03935 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB684_03975 SM00642 Alpha-amylase domain AB684_03980 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_03980 SM00866 AB684_03980 AB684_04030 SM00028 Tetratricopeptide repeats AB684_04045 SM00984 UDP binding domain AB684_04085 SM00226 Low molecular weight phosphatase family AB684_04150 SM00478 endonuclease III AB684_04205 SM01061 CAT RNA binding domain AB684_04240 SM00861 Transketolase, pyrimidine binding domain AB684_04255 SM00382 ATPases associated with a variety of cellular activities AB684_04315 SM00342 helix_turn_helix, arabinose operon control protein AB684_04415 SM00478 endonuclease III AB684_04415 SM00525 AB684_04415 AB684_04445 SM00382 ATPases associated with a variety of cellular activities AB684_04450 SM00382 ATPases associated with a variety of cellular activities AB684_04455 SM00382 ATPases associated with a variety of cellular activities AB684_04690 SM00530 Helix-turn-helix XRE-family like proteins AB684_04750 SM00382 ATPases associated with a variety of cellular activities AB684_04755 SM00062 Bacterial periplasmic substrate-binding proteins AB684_04775 SM00530 Helix-turn-helix XRE-family like proteins AB684_04785 SM00382 ATPases associated with a variety of cellular activities AB684_04820 SM00567 E-Z type HEAT repeats AB684_04850 SM00763 PrkA AAA domain AB684_04895 SM00382 ATPases associated with a variety of cellular activities AB684_04905 SM00357 Cold shock protein domain AB684_04910 SM00382 ATPases associated with a variety of cellular activities AB684_04910 SM00930 AB684_04910 AB684_04955 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AB684_04955 SM00091 PAS domain AB684_04955 SM00387 Histidine kinase-like ATPases AB684_04955 SM00388 His Kinase A (phosphoacceptor) domain AB684_04960 SM00318 Staphylococcal nuclease homologues AB684_04980 SM00116 Domain in cystathionine beta-synthase and other proteins. AB684_04995 SM00382 ATPases associated with a variety of cellular activities AB684_05010 SM00829 Enoylreductase AB684_05045 SM00530 Helix-turn-helix XRE-family like proteins AB684_05050 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB684_05050 SM00387 Histidine kinase-like ATPases AB684_05055 SM00421 helix_turn_helix, Lux Regulon AB684_05055 SM00448 cheY-homologous receiver domain AB684_05090 SM00257 Lysin motif AB684_05125 SM00342 helix_turn_helix, arabinose operon control protein AB684_05125 SM00871 Bacterial transcription activator, effector binding domain AB684_05130 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_05165 SM00563 Phosphate acyltransferases AB684_05185 SM01091 Transporter associated domain AB684_05190 SM00422 helix_turn_helix, mercury resistance AB684_05195 SM01091 Transporter associated domain AB684_05210 SM00646 AB684_05210 AB684_05285 SM00382 ATPases associated with a variety of cellular activities AB684_05290 SM00382 ATPases associated with a variety of cellular activities AB684_05310 SM00382 ATPases associated with a variety of cellular activities AB684_05355 SM00729 Elongator protein 3, MiaB family, Radical SAM AB684_05380 SM00028 Tetratricopeptide repeats AB684_05395 SM00382 ATPases associated with a variety of cellular activities AB684_05415 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB684_05445 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_05475 SM00382 ATPases associated with a variety of cellular activities AB684_05555 SM00849 Metallo-beta-lactamase superfamily AB684_05575 SM00530 Helix-turn-helix XRE-family like proteins AB684_05620 SM00855 Phosphoglycerate mutase family AB684_05625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB684_05640 SM00914 AB684_05640 AB684_05755 SM00354 helix_turn _helix lactose operon repressor AB684_05815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB684_05815 SM00387 Histidine kinase-like ATPases AB684_05815 SM00388 His Kinase A (phosphoacceptor) domain AB684_05820 SM00448 cheY-homologous receiver domain AB684_05820 SM00862 Transcriptional regulatory protein, C terminal AB684_05940 SM00938 Nitrogen regulatory protein P-II AB684_05950 SM00342 helix_turn_helix, arabinose operon control protein AB684_05960 SM00354 helix_turn _helix lactose operon repressor AB684_05990 SM01006 Siderophore biosynthesis protein domain AB684_06015 SM00420 helix_turn_helix, Deoxyribose operon repressor AB684_06020 SM01018 B12 binding domain AB684_06035 SM00316 Ribosomal protein S1-like RNA-binding domain AB684_06060 SM01240 AB684_06060 AB684_06090 SM00859 Semialdehyde dehydrogenase, NAD binding domain AB684_06110 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AB684_06115 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AB684_06170 SM00825 Beta-ketoacyl synthase AB684_06180 SM00382 ATPases associated with a variety of cellular activities AB684_06185 SM00382 ATPases associated with a variety of cellular activities AB684_06245 SM00382 ATPases associated with a variety of cellular activities AB684_06250 SM00382 ATPases associated with a variety of cellular activities AB684_06290 SM00448 cheY-homologous receiver domain AB684_06295 SM00091 PAS domain AB684_06295 SM00387 Histidine kinase-like ATPases AB684_06325 SM01118 AB684_06325 AB684_06335 SM00954 Region found in RelA / SpoT proteins AB684_06530 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_06565 SM01266 AB684_06565 AB684_06620 SM00257 Lysin motif AB684_06665 SM00530 Helix-turn-helix XRE-family like proteins AB684_06670 SM00530 Helix-turn-helix XRE-family like proteins AB684_06685 SM00382 ATPases associated with a variety of cellular activities AB684_06775 SM00257 Lysin motif AB684_06830 SM00644 AB684_06830 AB684_06840 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_06840 SM00895 AB684_06840 AB684_06845 SM00829 Enoylreductase AB684_06905 SM00342 helix_turn_helix, arabinose operon control protein AB684_06905 SM00448 cheY-homologous receiver domain AB684_06930 SM00342 helix_turn_helix, arabinose operon control protein AB684_07020 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB684_07045 SM00382 ATPases associated with a variety of cellular activities AB684_07070 SM00382 ATPases associated with a variety of cellular activities AB684_07090 SM00656 AB684_07090 AB684_07130 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AB684_07145 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_07165 SM00855 Phosphoglycerate mutase family AB684_07190 SM00116 Domain in cystathionine beta-synthase and other proteins. AB684_07190 SM00924 MgtE intracellular N domain AB684_07200 SM00422 helix_turn_helix, mercury resistance AB684_07210 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_07220 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AB684_07225 SM00267 diguanylate cyclase AB684_07290 SM00091 PAS domain AB684_07290 SM00387 Histidine kinase-like ATPases AB684_07290 SM00388 His Kinase A (phosphoacceptor) domain AB684_07325 SM01007 Class II Aldolase and Adducin N-terminal domain AB684_07350 SM00387 Histidine kinase-like ATPases AB684_07350 SM00388 His Kinase A (phosphoacceptor) domain AB684_07355 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_07370 SM00382 ATPases associated with a variety of cellular activities AB684_07370 SM01086 C-terminal, D2-small domain, of ClpB protein AB684_07405 SM00028 Tetratricopeptide repeats AB684_07420 SM00530 Helix-turn-helix XRE-family like proteins AB684_07490 SM00354 helix_turn _helix lactose operon repressor AB684_07495 SM01061 CAT RNA binding domain AB684_07530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB684_07530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB684_07555 SM00091 PAS domain AB684_07555 SM00387 Histidine kinase-like ATPases AB684_07555 SM00388 His Kinase A (phosphoacceptor) domain AB684_07575 SM00260 Two component signalling adaptor domain AB684_07575 SM00448 cheY-homologous receiver domain AB684_07590 SM00257 Lysin motif AB684_07605 SM00052 Putative diguanylate phosphodiesterase AB684_07700 SM00852 Probable molybdopterin binding domain AB684_07725 SM00382 ATPases associated with a variety of cellular activities AB684_07730 SM00382 ATPases associated with a variety of cellular activities AB684_07745 SM00382 ATPases associated with a variety of cellular activities AB684_07750 SM01066 Carbohydrate binding domain AB684_07755 SM00420 helix_turn_helix, Deoxyribose operon repressor AB684_07755 SM01134 AB684_07755 AB684_07785 SM00382 ATPases associated with a variety of cellular activities AB684_07805 SM00966 SpoVT / AbrB like domain AB684_07810 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AB684_07810 SM00091 PAS domain AB684_07810 SM00387 Histidine kinase-like ATPases AB684_07810 SM00388 His Kinase A (phosphoacceptor) domain AB684_07825 SM00849 Metallo-beta-lactamase superfamily AB684_07865 SM00861 Transketolase, pyrimidine binding domain AB684_07940 SM00838 Elongation factor G C-terminus AB684_07950 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_07970 SM00670 Large family of predicted nucleotide-binding domains AB684_07995 SM00878 Biotin carboxylase C-terminal domain AB684_08040 SM00116 Domain in cystathionine beta-synthase and other proteins. AB684_08085 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB684_08135 SM00740 AB684_08135 AB684_08140 SM00740 AB684_08140 AB684_08195 SM00842 Cell division protein FtsA AB684_08200 SM00864 Tubulin/FtsZ family, GTPase domain AB684_08200 SM00865 Tubulin/FtsZ family, C-terminal domain AB684_08230 SM00382 ATPases associated with a variety of cellular activities AB684_08265 SM00363 S4 RNA-binding domain AB684_08290 SM00363 S4 RNA-binding domain AB684_08315 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AB684_08320 SM00851 MGS-like domain AB684_08320 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AB684_08335 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AB684_08385 SM00831 Cation transporter/ATPase, N-terminus AB684_08400 SM00072 Guanylate kinase homologues. AB684_08405 SM01409 AB684_08405 AB684_08415 SM00487 DEAD-like helicases superfamily AB684_08415 SM00490 helicase superfamily c-terminal domain AB684_08440 SM00331 Sigma factor PP2C-like phosphatases AB684_08440 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AB684_08445 SM00220 Serine/Threonine protein kinases, catalytic domain AB684_08445 SM00740 AB684_08445 AB684_08460 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AB684_08480 SM01120 AB684_08480 AB684_08480 SM01121 AB684_08480 AB684_08495 SM00487 DEAD-like helicases superfamily AB684_08495 SM00490 helicase superfamily c-terminal domain AB684_08510 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AB684_08515 SM00822 AB684_08515 AB684_08525 SM00358 Double-stranded RNA binding motif AB684_08525 SM00535 Ribonuclease III family AB684_08530 SM00968 SMC proteins Flexible Hinge Domain AB684_08535 SM00382 ATPases associated with a variety of cellular activities AB684_08535 SM00962 SRP54-type protein, GTPase domain AB684_08535 SM00963 SRP54-type protein, helical bundle domain AB684_08545 SM00382 ATPases associated with a variety of cellular activities AB684_08545 SM00962 SRP54-type protein, GTPase domain AB684_08545 SM00963 SRP54-type protein, helical bundle domain AB684_08605 SM00881 CoA binding domain AB684_08615 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AB684_08615 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AB684_08615 SM00493 AB684_08615 AB684_08635 SM00382 ATPases associated with a variety of cellular activities AB684_08635 SM01086 C-terminal, D2-small domain, of ClpB protein AB684_08675 SM00382 ATPases associated with a variety of cellular activities AB684_08725 SM00448 cheY-homologous receiver domain AB684_08760 SM00382 ATPases associated with a variety of cellular activities AB684_08760 SM00962 SRP54-type protein, GTPase domain AB684_08770 SM00448 cheY-homologous receiver domain AB684_08775 SM00073 Histidine Phosphotransfer domain AB684_08775 SM00260 Two component signalling adaptor domain AB684_08775 SM00387 Histidine kinase-like ATPases AB684_08775 SM01231 AB684_08775 AB684_08780 SM00260 Two component signalling adaptor domain AB684_08840 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB684_08850 SM00479 AB684_08850 AB684_08850 SM00481 DNA polymerase alpha chain like domain AB684_08860 SM01067 Cellulose binding domain AB684_08885 SM00316 Ribosomal protein S1-like RNA-binding domain AB684_08885 SM00322 K homology RNA-binding domain AB684_08920 SM00904 Riboflavin kinase AB684_08925 SM01387 AB684_08925 AB684_08930 SM00316 Ribosomal protein S1-like RNA-binding domain AB684_08930 SM00322 K homology RNA-binding domain AB684_08960 SM00859 Semialdehyde dehydrogenase, NAD binding domain AB684_08970 SM01130 AB684_08970 AB684_08975 SM00849 Metallo-beta-lactamase superfamily AB684_08990 SM00382 ATPases associated with a variety of cellular activities AB684_08990 SM00843 AB684_08990 AB684_08995 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_08995 SM00866 AB684_08995 AB684_09030 SM00530 Helix-turn-helix XRE-family like proteins AB684_09040 SM00852 Probable molybdopterin binding domain AB684_09045 SM00382 ATPases associated with a variety of cellular activities AB684_09050 SM00322 K homology RNA-binding domain AB684_09050 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB684_09070 SM00829 Enoylreductase AB684_09080 SM00729 Elongator protein 3, MiaB family, Radical SAM AB684_09095 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AB684_09095 SM00534 ATPase domain of DNA mismatch repair MUTS family AB684_09100 SM00853 MutL C terminal dimerisation domain AB684_09100 SM01340 AB684_09100 AB684_09125 SM00833 Cobalamin synthesis protein cobW C-terminal domain AB684_09205 SM00257 Lysin motif AB684_09205 SM00636 AB684_09205 AB684_09295 SM00849 Metallo-beta-lactamase superfamily AB684_09310 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_09310 SM00895 AB684_09310 AB684_09320 SM00646 AB684_09320 AB684_09400 SM00382 ATPases associated with a variety of cellular activities AB684_09415 SM00422 helix_turn_helix, mercury resistance AB684_09420 SM01230 AB684_09420 AB684_09560 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_09575 SM00903 Flavin reductase like domain AB684_09610 SM00257 Lysin motif AB684_09615 SM00857 Resolvase, N terminal domain AB684_09625 SM00861 Transketolase, pyrimidine binding domain AB684_09650 SM00448 cheY-homologous receiver domain AB684_09730 SM01207 AB684_09730 AB684_09735 SM00881 CoA binding domain AB684_09740 SM00387 Histidine kinase-like ATPases AB684_09740 SM00433 TopoisomeraseII AB684_09745 SM00434 DNA Topoisomerase IV AB684_09750 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_09760 SM01007 Class II Aldolase and Adducin N-terminal domain AB684_09810 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AB684_09825 SM00729 Elongator protein 3, MiaB family, Radical SAM AB684_09840 SM00100 Cyclic nucleotide-monophosphate binding domain AB684_09840 SM00419 helix_turn_helix, cAMP Regulatory protein AB684_09855 SM00100 Cyclic nucleotide-monophosphate binding domain AB684_09855 SM00419 helix_turn_helix, cAMP Regulatory protein AB684_09875 SM01067 Cellulose binding domain AB684_09905 SM00710 Parallel beta-helix repeats AB684_09905 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AB684_09920 SM00422 helix_turn_helix, mercury resistance AB684_10000 SM00382 ATPases associated with a variety of cellular activities AB684_10005 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_10040 SM00354 helix_turn _helix lactose operon repressor AB684_10045 SM00226 Low molecular weight phosphatase family AB684_10055 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB684_10155 SM00878 Biotin carboxylase C-terminal domain AB684_10185 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AB684_10225 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AB684_10280 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_10280 SM00529 Helix-turn-helix diphteria tox regulatory element AB684_10285 SM00382 ATPases associated with a variety of cellular activities AB684_10290 SM00382 ATPases associated with a variety of cellular activities AB684_10300 SM00822 AB684_10300 AB684_10315 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AB684_10320 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_10355 SM00382 ATPases associated with a variety of cellular activities AB684_10360 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB684_10360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB684_10360 SM00319 Homologues of the ligand binding domain of Tar AB684_10385 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_10420 SM00849 Metallo-beta-lactamase superfamily AB684_10425 SM00871 Bacterial transcription activator, effector binding domain AB684_10445 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB684_10450 SM00849 Metallo-beta-lactamase superfamily AB684_10510 SM00257 Lysin motif AB684_10515 SM00341 Helicase and RNase D C-terminal AB684_10515 SM00487 DEAD-like helicases superfamily AB684_10515 SM00490 helicase superfamily c-terminal domain AB684_10515 SM00956 AB684_10515 AB684_10625 SM00860 SMI1 / KNR4 family AB684_10765 SM00861 Transketolase, pyrimidine binding domain AB684_10770 SM00327 von Willebrand factor (vWF) type A domain AB684_10775 SM00382 ATPases associated with a variety of cellular activities AB684_10785 SM00257 Lysin motif AB684_10875 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB684_10875 SM00245 tail specific protease AB684_10915 SM00014 Acid phosphatase homologues AB684_11150 SM00497 Intron encoded nuclease repeat motif AB684_11150 SM00507 HNH nucleases AB684_11515 SM00465 GIY-YIG type nucleases (URI domain) AB684_11560 SM00411 bacterial (prokaryotic) histone like domain AB684_11725 SM00530 Helix-turn-helix XRE-family like proteins AB684_11770 SM00710 Parallel beta-helix repeats AB684_11775 SM00644 AB684_11775 AB684_11795 SM00028 Tetratricopeptide repeats AB684_11815 SM00860 SMI1 / KNR4 family AB684_11820 SM00860 SMI1 / KNR4 family AB684_11825 SM00860 SMI1 / KNR4 family AB684_11835 SM00860 SMI1 / KNR4 family AB684_11845 SM00857 Resolvase, N terminal domain AB684_11865 SM00882 Coenzyme A transferase AB684_11870 SM00882 Coenzyme A transferase AB684_11900 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_11910 SM00267 diguanylate cyclase AB684_11960 SM00382 ATPases associated with a variety of cellular activities AB684_12005 SM00567 E-Z type HEAT repeats AB684_12005 SM00932 Scaffold protein Nfu/NifU N terminal AB684_12010 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB684_12040 SM00357 Cold shock protein domain AB684_12080 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AB684_12080 SM00475 5'-3' exonuclease AB684_12130 SM00491 AB684_12130 AB684_12150 SM00981 AB684_12150 AB684_12180 SM00487 DEAD-like helicases superfamily AB684_12180 SM00490 helicase superfamily c-terminal domain AB684_12235 SM00060 Fibronectin type 3 domain AB684_12245 SM00478 endonuclease III AB684_12245 SM00525 AB684_12245 AB684_12270 SM00479 AB684_12270 AB684_12270 SM00487 DEAD-like helicases superfamily AB684_12270 SM00491 AB684_12270 AB684_12315 SM00851 MGS-like domain AB684_12365 SM00914 AB684_12365 AB684_12370 SM00028 Tetratricopeptide repeats AB684_12435 SM00138 Methyltransferase, chemotaxis proteins AB684_12440 SM00562 AB684_12440 AB684_12470 SM00411 bacterial (prokaryotic) histone like domain AB684_12520 SM01240 AB684_12520 AB684_12525 SM00316 Ribosomal protein S1-like RNA-binding domain AB684_12550 SM00870 AB684_12550 AB684_12560 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB684_12580 SM00257 Lysin motif AB684_12590 SM00487 DEAD-like helicases superfamily AB684_12590 SM00490 helicase superfamily c-terminal domain AB684_12615 SM00257 Lysin motif AB684_12645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB684_12645 SM00387 Histidine kinase-like ATPases AB684_12645 SM00388 His Kinase A (phosphoacceptor) domain AB684_12650 SM00448 cheY-homologous receiver domain AB684_12650 SM00862 Transcriptional regulatory protein, C terminal AB684_12655 SM00091 PAS domain AB684_12655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB684_12655 SM00387 Histidine kinase-like ATPases AB684_12655 SM00388 His Kinase A (phosphoacceptor) domain AB684_12660 SM00448 cheY-homologous receiver domain AB684_12660 SM00862 Transcriptional regulatory protein, C terminal AB684_12680 SM00363 S4 RNA-binding domain AB684_12695 SM00936 Penicillin-binding protein 5, C-terminal domain AB684_12765 SM00028 Tetratricopeptide repeats AB684_12835 SM00387 Histidine kinase-like ATPases AB684_12845 SM00936 Penicillin-binding protein 5, C-terminal domain AB684_13000 SM00382 ATPases associated with a variety of cellular activities AB684_13005 SM00382 ATPases associated with a variety of cellular activities AB684_13060 SM00382 ATPases associated with a variety of cellular activities AB684_13095 SM00849 Metallo-beta-lactamase superfamily AB684_13150 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_13150 SM00866 AB684_13150 AB684_13175 SM00098 Alkaline phosphatase homologues AB684_13185 SM01350 AB684_13185 AB684_13220 SM00382 ATPases associated with a variety of cellular activities AB684_13230 SM00062 Bacterial periplasmic substrate-binding proteins AB684_13230 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AB684_13240 SM00046 Diacylglycerol kinase catalytic domain (presumed) AB684_13250 SM00861 Transketolase, pyrimidine binding domain AB684_13270 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB684_13280 SM00091 PAS domain AB684_13280 SM00382 ATPases associated with a variety of cellular activities AB684_13295 SM00646 AB684_13295 AB684_13320 SM00448 cheY-homologous receiver domain AB684_13325 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB684_13340 SM00363 S4 RNA-binding domain AB684_13345 SM00861 Transketolase, pyrimidine binding domain AB684_13380 SM00878 Biotin carboxylase C-terminal domain AB684_13425 SM00382 ATPases associated with a variety of cellular activities AB684_13435 SM00841 Elongation factor P, C-terminal AB684_13435 SM01185 AB684_13435 AB684_13475 SM00529 Helix-turn-helix diphteria tox regulatory element AB684_13485 SM00450 Rhodanese Homology Domain AB684_13500 SM00116 Domain in cystathionine beta-synthase and other proteins. AB684_13500 SM00382 ATPases associated with a variety of cellular activities AB684_13520 SM00487 DEAD-like helicases superfamily AB684_13520 SM00490 helicase superfamily c-terminal domain AB684_13535 SM00530 Helix-turn-helix XRE-family like proteins AB684_13595 SM00382 ATPases associated with a variety of cellular activities AB684_13620 SM00849 Metallo-beta-lactamase superfamily AB684_13635 SM00631 AB684_13635 AB684_13665 SM00028 Tetratricopeptide repeats AB684_13695 SM00382 ATPases associated with a variety of cellular activities AB684_13700 SM00382 ATPases associated with a variety of cellular activities AB684_13775 SM00382 ATPases associated with a variety of cellular activities AB684_13790 SM00518 AP endonuclease family 2 AB684_13795 SM00487 DEAD-like helicases superfamily AB684_13795 SM00490 helicase superfamily c-terminal domain AB684_13895 SM00400 zinc finger AB684_13895 SM00493 AB684_13895 AB684_13910 SM00116 Domain in cystathionine beta-synthase and other proteins. AB684_13950 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB684_14000 SM01133 AB684_14000 AB684_14005 SM00729 Elongator protein 3, MiaB family, Radical SAM AB684_14020 SM00271 DnaJ molecular chaperone homology domain AB684_14040 SM00729 Elongator protein 3, MiaB family, Radical SAM AB684_14045 SM00838 Elongation factor G C-terminus AB684_14075 SM00849 Metallo-beta-lactamase superfamily AB684_14085 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB684_14105 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB684_14115 SM01103 AB684_14115 AB684_14155 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AB684_14155 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AB684_14175 SM01179 AB684_14175 AB684_14220 SM00487 DEAD-like helicases superfamily AB684_14220 SM00491 AB684_14220 AB684_14235 SM00382 ATPases associated with a variety of cellular activities AB684_14245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB684_14245 SM00387 Histidine kinase-like ATPases AB684_14245 SM00388 His Kinase A (phosphoacceptor) domain AB684_14250 SM00448 cheY-homologous receiver domain AB684_14250 SM00862 Transcriptional regulatory protein, C terminal AB684_14305 SM00450 Rhodanese Homology Domain AB684_14305 SM00849 Metallo-beta-lactamase superfamily AB684_14315 SM00421 helix_turn_helix, Lux Regulon AB684_14315 SM00448 cheY-homologous receiver domain AB684_14320 SM00387 Histidine kinase-like ATPases AB684_14340 SM00450 Rhodanese Homology Domain AB684_14340 SM00849 Metallo-beta-lactamase superfamily AB684_14345 SM00450 Rhodanese Homology Domain AB684_14385 SM01234 AB684_14385 AB684_14390 SM01004 Delta-aminolevulinic acid dehydratase AB684_14400 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AB684_14420 SM00421 helix_turn_helix, Lux Regulon AB684_14420 SM00448 cheY-homologous receiver domain AB684_14445 SM00382 ATPases associated with a variety of cellular activities AB684_14450 SM00382 ATPases associated with a variety of cellular activities AB684_14455 SM00422 helix_turn_helix, mercury resistance AB684_14465 SM00342 helix_turn_helix, arabinose operon control protein AB684_14475 SM00014 Acid phosphatase homologues AB684_14510 SM00640 Glycosyl hydrolases family 32 AB684_14535 SM00382 ATPases associated with a variety of cellular activities AB684_14550 SM01059 Chloramphenicol acetyltransferase AB684_14555 SM00342 helix_turn_helix, arabinose operon control protein AB684_14660 SM00650 Ribosomal RNA adenine dimethylases AB684_14715 SM00732 Likely ribonuclease with RNase H fold. AB684_14725 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AB684_14745 SM00382 ATPases associated with a variety of cellular activities AB684_14750 SM00028 Tetratricopeptide repeats AB684_14770 SM00382 ATPases associated with a variety of cellular activities AB684_14795 SM00287 Bacterial SH3 domain homologues AB684_14795 SM00646 AB684_14795 AB684_14805 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB684_14805 SM00954 Region found in RelA / SpoT proteins AB684_14850 SM01323 AB684_14850 AB684_14870 SM00382 ATPases associated with a variety of cellular activities AB684_14875 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB684_14925 SM00257 Lysin motif AB684_14970 SM01317 AB684_14970 AB684_15005 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB684_15075 SM00257 Lysin motif AB684_15085 SM01004 Delta-aminolevulinic acid dehydratase AB684_15120 SM00382 ATPases associated with a variety of cellular activities AB684_15120 SM00464 Found in ATP-dependent protease La (LON) AB684_15125 SM00382 ATPases associated with a variety of cellular activities AB684_15130 SM00382 ATPases associated with a variety of cellular activities AB684_15130 SM00994 ClpX C4-type zinc finger AB684_15130 SM01086 C-terminal, D2-small domain, of ClpB protein AB684_15155 SM01329 AB684_15155 AB684_15160 SM00917 LeuA allosteric (dimerisation) domain AB684_15195 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB684_15230 SM00954 Region found in RelA / SpoT proteins AB684_15285 SM00028 Tetratricopeptide repeats AB684_15315 SM00909 Sporulation and spore germination AB684_15325 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_15330 SM00421 helix_turn_helix, Lux Regulon AB684_15370 SM00465 GIY-YIG type nucleases (URI domain) AB684_15380 SM00893 Electron transfer flavoprotein domain AB684_15385 SM00893 Electron transfer flavoprotein domain AB684_15410 SM00463 Small MutS-related domain AB684_15410 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AB684_15410 SM00534 ATPase domain of DNA mismatch repair MUTS family AB684_15415 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB684_15415 SM00481 DNA polymerase alpha chain like domain AB684_15415 SM00483 DNA polymerase X family AB684_15465 SM00382 ATPases associated with a variety of cellular activities AB684_15480 SM00873 B3/4 domain AB684_15480 SM00874 tRNA synthetase B5 domain AB684_15480 SM00896 Ferredoxin-fold anticodon binding domain AB684_15490 SM00967 RNA 2'-O ribose methyltransferase substrate binding AB684_15510 SM00813 Alpha-L-arabinofuranosidase C-terminus AB684_15535 SM01007 Class II Aldolase and Adducin N-terminal domain AB684_15600 SM00448 cheY-homologous receiver domain AB684_15600 SM00850 LytTr DNA-binding domain AB684_15605 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB684_15605 SM00387 Histidine kinase-like ATPases AB684_15620 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AB684_15635 SM00382 ATPases associated with a variety of cellular activities AB684_15665 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB684_15670 SM00656 AB684_15670 AB684_15685 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AB684_15685 SM01232 AB684_15685 AB684_15690 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AB684_15690 SM00474 3'-5' exonuclease AB684_15690 SM00475 5'-3' exonuclease AB684_15690 SM00482 DNA polymerase A domain AB684_15695 SM00091 PAS domain AB684_15695 SM00387 Histidine kinase-like ATPases AB684_15695 SM00388 His Kinase A (phosphoacceptor) domain AB684_15700 SM00448 cheY-homologous receiver domain AB684_15700 SM00862 Transcriptional regulatory protein, C terminal AB684_15710 SM01329 AB684_15710 AB684_15755 SM00919 Malic enzyme, NAD binding domain AB684_15755 SM01274 AB684_15755 AB684_15760 SM00481 DNA polymerase alpha chain like domain AB684_15790 SM00116 Domain in cystathionine beta-synthase and other proteins. AB684_15800 SM00849 Metallo-beta-lactamase superfamily AB684_15820 SM00852 Probable molybdopterin binding domain AB684_15875 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_15890 SM00981 AB684_15890 AB684_15920 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB684_15925 SM00267 diguanylate cyclase AB684_15930 SM00363 S4 RNA-binding domain AB684_15930 SM01390 AB684_15930 AB684_15950 SM00849 Metallo-beta-lactamase superfamily AB684_15955 SM00344 helix_turn_helix ASNC type AB684_15960 SM00363 S4 RNA-binding domain AB684_15975 SM00116 Domain in cystathionine beta-synthase and other proteins. AB684_15995 SM00354 helix_turn _helix lactose operon repressor AB684_16000 SM00830 Chorismate mutase type II AB684_16030 SM00382 ATPases associated with a variety of cellular activities AB684_16030 SM00843 AB684_16030 AB684_16065 SM00919 Malic enzyme, NAD binding domain AB684_16065 SM01274 AB684_16065 AB684_16070 SM00849 Metallo-beta-lactamase superfamily AB684_16090 SM00642 Alpha-amylase domain AB684_16095 SM00046 Diacylglycerol kinase catalytic domain (presumed) AB684_16135 SM00420 helix_turn_helix, Deoxyribose operon repressor AB684_16140 SM00363 S4 RNA-binding domain AB684_16170 SM00450 Rhodanese Homology Domain AB684_16175 SM00028 Tetratricopeptide repeats AB684_16210 SM00342 helix_turn_helix, arabinose operon control protein AB684_16280 SM00382 ATPases associated with a variety of cellular activities AB684_16290 SM00382 ATPases associated with a variety of cellular activities AB684_16295 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_16305 SM00729 Elongator protein 3, MiaB family, Radical SAM AB684_16335 SM00014 Acid phosphatase homologues AB684_16380 SM00382 ATPases associated with a variety of cellular activities AB684_16420 SM01234 AB684_16420 AB684_16425 SM00947 Carbonic anhydrase AB684_16430 SM00833 Cobalamin synthesis protein cobW C-terminal domain AB684_16460 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AB684_16520 SM00642 Alpha-amylase domain AB684_16645 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_16670 SM00028 Tetratricopeptide repeats AB684_16730 SM01005 Alanine racemase, C-terminal domain AB684_16735 SM00835 Cupin AB684_16845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB684_16845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB684_16845 SM00319 Homologues of the ligand binding domain of Tar AB684_16850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB684_16850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB684_16850 SM00319 Homologues of the ligand binding domain of Tar AB684_16855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB684_16855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB684_16855 SM00319 Homologues of the ligand binding domain of Tar AB684_16875 SM00642 Alpha-amylase domain AB684_16895 SM00116 Domain in cystathionine beta-synthase and other proteins. AB684_16895 SM01091 Transporter associated domain AB684_16950 SM00316 Ribosomal protein S1-like RNA-binding domain AB684_16960 SM00344 helix_turn_helix ASNC type AB684_16990 SM01298 AB684_16990 AB684_16995 SM00479 AB684_16995 AB684_17020 SM00091 PAS domain AB684_17020 SM00387 Histidine kinase-like ATPases AB684_17025 SM00448 cheY-homologous receiver domain AB684_17095 SM00421 helix_turn_helix, Lux Regulon AB684_17095 SM00448 cheY-homologous receiver domain AB684_17100 SM00387 Histidine kinase-like ATPases AB684_17130 SM00052 Putative diguanylate phosphodiesterase AB684_17180 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB684_17230 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AB684_17230 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AB684_17335 SM00028 Tetratricopeptide repeats AB684_17415 SM00729 Elongator protein 3, MiaB family, Radical SAM AB684_17510 SM01092 CO dehydrogenase flavoprotein C-terminal domain AB684_17530 SM00028 Tetratricopeptide repeats AB684_17555 SM00382 ATPases associated with a variety of cellular activities AB684_17580 SM00382 ATPases associated with a variety of cellular activities AB684_17580 SM00930 AB684_17580 AB684_17595 SM00493 AB684_17595 AB684_17650 SM00382 ATPases associated with a variety of cellular activities AB684_17695 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB684_17700 SM00448 cheY-homologous receiver domain AB684_17700 SM00862 Transcriptional regulatory protein, C terminal AB684_17705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB684_17705 SM00387 Histidine kinase-like ATPases AB684_17705 SM00388 His Kinase A (phosphoacceptor) domain AB684_17740 SM00421 helix_turn_helix, Lux Regulon AB684_17740 SM00448 cheY-homologous receiver domain AB684_17745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB684_17745 SM00387 Histidine kinase-like ATPases AB684_17800 SM01130 AB684_17800 AB684_17805 SM00382 ATPases associated with a variety of cellular activities AB684_17820 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_17820 SM00895 AB684_17820 AB684_17840 SM00710 Parallel beta-helix repeats AB684_17845 SM00858 AB684_17845 AB684_17855 SM00354 helix_turn _helix lactose operon repressor AB684_17870 SM00387 Histidine kinase-like ATPases AB684_17870 SM00388 His Kinase A (phosphoacceptor) domain AB684_17875 SM00448 cheY-homologous receiver domain AB684_17875 SM00862 Transcriptional regulatory protein, C terminal AB684_17880 SM00382 ATPases associated with a variety of cellular activities AB684_17995 SM00606 Cellulose Binding Domain Type IV AB684_17995 SM01217 AB684_17995 AB684_18000 SM00382 ATPases associated with a variety of cellular activities AB684_18065 SM00420 helix_turn_helix, Deoxyribose operon repressor AB684_18065 SM01134 AB684_18065 AB684_18085 SM01007 Class II Aldolase and Adducin N-terminal domain AB684_18115 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_18135 SM00450 Rhodanese Homology Domain AB684_18150 SM00835 Cupin AB684_18195 SM00316 Ribosomal protein S1-like RNA-binding domain AB684_18195 SM00357 Cold shock protein domain AB684_18195 SM00955 AB684_18195 AB684_18210 SM00966 SpoVT / AbrB like domain AB684_18215 SM00530 Helix-turn-helix XRE-family like proteins AB684_18220 SM00530 Helix-turn-helix XRE-family like proteins AB684_18225 SM00530 Helix-turn-helix XRE-family like proteins AB684_18245 SM00116 Domain in cystathionine beta-synthase and other proteins. AB684_18245 SM00382 ATPases associated with a variety of cellular activities AB684_18285 SM01192 AB684_18285 AB684_18285 SM01193 AB684_18285 AB684_18305 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB684_18330 SM00382 ATPases associated with a variety of cellular activities AB684_18355 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_18355 SM00895 AB684_18355 AB684_18450 SM00530 Helix-turn-helix XRE-family like proteins AB684_18485 SM01130 AB684_18485 AB684_18510 SM00640 Glycosyl hydrolases family 32 AB684_18550 SM00947 Carbonic anhydrase AB684_18565 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB684_18620 SM00028 Tetratricopeptide repeats AB684_18705 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_18755 SM00382 ATPases associated with a variety of cellular activities AB684_18760 SM00487 DEAD-like helicases superfamily AB684_18760 SM00490 helicase superfamily c-terminal domain AB684_18775 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB684_18785 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB684_18785 SM00245 tail specific protease AB684_18790 SM01329 AB684_18790 AB684_18805 SM00382 ATPases associated with a variety of cellular activities AB684_18825 SM00937 AB684_18825 AB684_18830 SM00957 SecA DEAD-like domain AB684_18830 SM00958 SecA preprotein cross-linking domain AB684_18920 SM00487 DEAD-like helicases superfamily AB684_18920 SM00490 helicase superfamily c-terminal domain AB684_18930 SM00421 helix_turn_helix, Lux Regulon AB684_18930 SM00448 cheY-homologous receiver domain AB684_18935 SM00387 Histidine kinase-like ATPases AB684_18985 SM00984 UDP binding domain AB684_19005 SM00646 AB684_19005 AB684_19035 SM00382 ATPases associated with a variety of cellular activities AB684_19070 SM00047 Lysozyme subfamily 2 AB684_19070 SM00287 Bacterial SH3 domain homologues AB684_19105 SM00354 helix_turn _helix lactose operon repressor AB684_19145 SM00854 Bacterial capsule synthesis protein PGA_cap AB684_19160 SM00354 helix_turn _helix lactose operon repressor AB684_19175 SM00382 ATPases associated with a variety of cellular activities AB684_19225 SM00344 helix_turn_helix ASNC type AB684_19255 SM00487 DEAD-like helicases superfamily AB684_19255 SM00490 helicase superfamily c-terminal domain AB684_19265 SM00420 helix_turn_helix, Deoxyribose operon repressor AB684_19265 SM01134 AB684_19265 AB684_19350 SM00347 helix_turn_helix multiple antibiotic resistance protein AB684_19360 SM00014 Acid phosphatase homologues AB684_19365 SM01131 AB684_19365 AB684_19380 SM00116 Domain in cystathionine beta-synthase and other proteins. AB684_19390 SM00116 Domain in cystathionine beta-synthase and other proteins. AB684_19390 SM01091 Transporter associated domain AB684_19400 SM00938 Nitrogen regulatory protein P-II AB684_19430 SM00155 Phospholipase D. Active site motifs. AB684_19440 SM00923 MbtH-like protein AB684_19445 SM00823 Phosphopantetheine attachment site AB684_19445 SM00824 Thioesterase AB684_19465 SM00822 AB684_19465 AB684_19490 SM00342 helix_turn_helix, arabinose operon control protein AB684_19515 SM00729 Elongator protein 3, MiaB family, Radical SAM AB684_19535 SM00327 von Willebrand factor (vWF) type A domain AB684_19540 SM00327 von Willebrand factor (vWF) type A domain AB684_19570 SM00382 ATPases associated with a variety of cellular activities AB684_19635 SM00226 Low molecular weight phosphatase family AB684_19680 SM00354 helix_turn _helix lactose operon repressor AB684_19690 SM00937 AB684_19690 AB684_19710 SM00919 Malic enzyme, NAD binding domain AB684_19710 SM01274 AB684_19710 AB684_19725 SM00357 Cold shock protein domain AB684_19725 SM00382 ATPases associated with a variety of cellular activities AB684_19725 SM00959 Rho termination factor, N-terminal domain AB684_19750 SM00448 cheY-homologous receiver domain AB684_19795 SM00155 Phospholipase D. Active site motifs. AB684_19805 SM00836 DALR anticodon binding domain AB684_19805 SM01016 Arginyl tRNA synthetase N terminal dom AB684_19865 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB684_19920 SM00346 helix_turn_helix isocitrate lyase regulation AB684_19970 SM00382 ATPases associated with a variety of cellular activities AB684_19980 SM00421 helix_turn_helix, Lux Regulon AB684_19980 SM00448 cheY-homologous receiver domain AB684_20005 SM00986 Uracil DNA glycosylase superfamily AB684_20005 SM00987 UreE urease accessory protein, C-terminal domain AB684_20025 SM00640 Glycosyl hydrolases family 32 AB684_20035 SM01061 CAT RNA binding domain AB684_20105 SM00382 ATPases associated with a variety of cellular activities AB684_20110 SM00382 ATPases associated with a variety of cellular activities AB684_20130 SM00421 helix_turn_helix, Lux Regulon AB684_20130 SM00448 cheY-homologous receiver domain AB684_20245 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AB684_20265 SM00387 Histidine kinase-like ATPases AB684_20270 SM00421 helix_turn_helix, Lux Regulon AB684_20270 SM00448 cheY-homologous receiver domain AB684_20290 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AB684_20305 SM00346 helix_turn_helix isocitrate lyase regulation AB684_20325 SM00954 Region found in RelA / SpoT proteins AB684_20400 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_20400 SM00895 AB684_20400 AB684_20430 SM00382 ATPases associated with a variety of cellular activities AB684_20460 SM00382 ATPases associated with a variety of cellular activities AB684_20490 SM01060 AB684_20490 AB684_20495 SM01060 AB684_20495 AB684_20515 SM00382 ATPases associated with a variety of cellular activities AB684_20530 SM00382 ATPases associated with a variety of cellular activities AB684_20540 SM00530 Helix-turn-helix XRE-family like proteins AB684_20555 SM00382 ATPases associated with a variety of cellular activities AB684_20560 SM01260 AB684_20560 AB684_20575 SM01260 AB684_20575 AB684_20580 SM00656 AB684_20580 AB684_20590 SM00382 ATPases associated with a variety of cellular activities AB684_20595 SM00382 ATPases associated with a variety of cellular activities AB684_20625 SM00919 Malic enzyme, NAD binding domain AB684_20625 SM01274 AB684_20625 AB684_20640 SM00870 AB684_20640 AB684_20645 SM00530 Helix-turn-helix XRE-family like proteins AB684_20655 SM00448 cheY-homologous receiver domain AB684_20655 SM00862 Transcriptional regulatory protein, C terminal AB684_20660 SM00387 Histidine kinase-like ATPases AB684_20670 SM00382 ATPases associated with a variety of cellular activities AB684_20715 SM00894 Excalibur calcium-binding domain AB684_20770 SM00100 Cyclic nucleotide-monophosphate binding domain AB684_20770 SM00419 helix_turn_helix, cAMP Regulatory protein AB684_20815 SM00382 ATPases associated with a variety of cellular activities AB684_20830 SM00640 Glycosyl hydrolases family 32 AB684_20845 SM00354 helix_turn _helix lactose operon repressor AB684_20890 SM01060 AB684_20890 AB684_20895 SM00871 Bacterial transcription activator, effector binding domain AB684_20910 SM01061 CAT RNA binding domain AB684_20920 SM00382 ATPases associated with a variety of cellular activities AB684_20955 SM00382 ATPases associated with a variety of cellular activities AB684_20960 SM00387 Histidine kinase-like ATPases AB684_20965 SM00448 cheY-homologous receiver domain AB684_20965 SM00862 Transcriptional regulatory protein, C terminal AB684_21000 SM00487 DEAD-like helicases superfamily AB684_21000 SM00490 helicase superfamily c-terminal domain AB684_21030 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AB684_21040 SM01133 AB684_21040 AB684_21060 SM00267 diguanylate cyclase AB684_21155 SM00420 helix_turn_helix, Deoxyribose operon repressor AB684_21155 SM01134 AB684_21155 AB684_21175 SM00387 Histidine kinase-like ATPases AB684_21180 SM00382 ATPases associated with a variety of cellular activities AB684_21230 SM00899 AB684_21230 AB684_21245 SM00382 ATPases associated with a variety of cellular activities AB684_21250 SM00387 Histidine kinase-like ATPases AB684_21250 SM00388 His Kinase A (phosphoacceptor) domain AB684_21255 SM00448 cheY-homologous receiver domain AB684_21255 SM00862 Transcriptional regulatory protein, C terminal AB684_21265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB684_21265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB684_21275 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AB684_21275 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AB684_21305 SM00354 helix_turn _helix lactose operon repressor AB684_21330 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_21330 SM00895 AB684_21330 AB684_21345 SM01350 AB684_21345 AB684_21385 SM00382 ATPases associated with a variety of cellular activities AB684_21400 SM00421 helix_turn_helix, Lux Regulon AB684_21400 SM00448 cheY-homologous receiver domain AB684_21415 SM00382 ATPases associated with a variety of cellular activities AB684_21450 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB684_21455 SM00849 Metallo-beta-lactamase superfamily AB684_21470 SM00091 PAS domain AB684_21470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB684_21470 SM00387 Histidine kinase-like ATPases AB684_21470 SM00388 His Kinase A (phosphoacceptor) domain AB684_21475 SM00448 cheY-homologous receiver domain AB684_21475 SM00862 Transcriptional regulatory protein, C terminal AB684_21505 SM00788 Adenylosuccinate synthetase AB684_21515 SM00382 ATPases associated with a variety of cellular activities AB684_21545 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB684_21545 SM00866 AB684_21545 AB684_21565 SM00267 diguanylate cyclase AB684_21635 SM00470 ParB-like nuclease domain AB684_21655 SM00470 ParB-like nuclease domain AB684_21665 SM01228 AB684_21665 AB684_21675 SM00393 Putative single-stranded nucleic acids-binding domain AB684_21675 SM01245 AB684_21675