B37_00010 SM00047 Lysozyme subfamily 2 B37_00017 SM00644 B37_00017 B37_00045 SM00530 Helix-turn-helix XRE-family like proteins B37_00049 SM00420 helix_turn_helix, Deoxyribose operon repressor B37_00052 SM00642 Alpha-amylase domain B37_00053 SM00354 helix_turn _helix lactose operon repressor B37_00054 SM00642 Alpha-amylase domain B37_00060 SM00642 Alpha-amylase domain B37_00062 SM00363 S4 RNA-binding domain B37_00063 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_00074 SM00342 helix_turn_helix, arabinose operon control protein B37_00074 SM00871 Bacterial transcription activator, effector binding domain B37_00081 SM00460 Transglutaminase/protease-like homologues B37_00088 SM01001 AIR carboxylase B37_00090 SM00998 Adenylosuccinate lyase C-terminus B37_00093 SM01211 B37_00093 B37_00098 SM00798 AICARFT/IMPCHase bienzyme B37_00098 SM00851 MGS-like domain B37_00099 SM01209 B37_00099 B37_00099 SM01210 B37_00099 B37_00111 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B37_00111 SM00292 breast cancer carboxy-terminal domain B37_00111 SM00532 Ligase N family B37_00126 SM00845 GatB domain B37_00135 SM00046 Diacylglycerol kinase catalytic domain (presumed) B37_00137 SM00857 Resolvase, N terminal domain B37_00145 SM00487 DEAD-like helicases superfamily B37_00154 SM01061 CAT RNA binding domain B37_00155 SM00028 Tetratricopeptide repeats B37_00159 SM00530 Helix-turn-helix XRE-family like proteins B37_00162 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B37_00164 SM00382 ATPases associated with a variety of cellular activities B37_00168 SM00833 Cobalamin synthesis protein cobW C-terminal domain B37_00173 SM00729 Elongator protein 3, MiaB family, Radical SAM B37_00173 SM00876 Biotin and Thiamin Synthesis associated domain B37_00176 SM00422 helix_turn_helix, mercury resistance B37_00178 SM00382 ATPases associated with a variety of cellular activities B37_00179 SM00487 DEAD-like helicases superfamily B37_00179 SM00490 helicase superfamily c-terminal domain B37_00180 SM00829 Enoylreductase B37_00184 SM00849 Metallo-beta-lactamase superfamily B37_00185 SM00849 Metallo-beta-lactamase superfamily B37_00186 SM00631 B37_00186 B37_00189 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B37_00199 SM00642 Alpha-amylase domain B37_00200 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_00200 SM00866 B37_00200 B37_00211 SM00028 Tetratricopeptide repeats B37_00214 SM00984 UDP binding domain B37_00222 SM00226 Low molecular weight phosphatase family B37_00236 SM00478 endonuclease III B37_00247 SM01061 CAT RNA binding domain B37_00254 SM00861 Transketolase, pyrimidine binding domain B37_00257 SM00382 ATPases associated with a variety of cellular activities B37_00269 SM00342 helix_turn_helix, arabinose operon control protein B37_00291 SM00478 endonuclease III B37_00291 SM00525 B37_00291 B37_00297 SM00382 ATPases associated with a variety of cellular activities B37_00298 SM00382 ATPases associated with a variety of cellular activities B37_00299 SM00382 ATPases associated with a variety of cellular activities B37_00346 SM00493 B37_00346 B37_00355 SM00474 3'-5' exonuclease B37_00355 SM00482 DNA polymerase A domain B37_00382 SM00530 Helix-turn-helix XRE-family like proteins B37_00386 SM00507 HNH nucleases B37_00389 SM00507 HNH nucleases B37_00395 SM00635 Bacterial Ig-like domain 2 B37_00401 SM00060 Fibronectin type 3 domain B37_00411 SM00257 Lysin motif B37_00411 SM00644 B37_00411 B37_00416 SM00530 Helix-turn-helix XRE-family like proteins B37_00431 SM00028 Tetratricopeptide repeats B37_00436 SM00382 ATPases associated with a variety of cellular activities B37_00437 SM00062 Bacterial periplasmic substrate-binding proteins B37_00441 SM00530 Helix-turn-helix XRE-family like proteins B37_00443 SM00382 ATPases associated with a variety of cellular activities B37_00450 SM00567 E-Z type HEAT repeats B37_00456 SM00763 PrkA AAA domain B37_00458 SM00857 Resolvase, N terminal domain B37_00479 SM00028 Tetratricopeptide repeats B37_00492 SM00710 Parallel beta-helix repeats B37_00497 SM00966 SpoVT / AbrB like domain B37_00526 SM00257 Lysin motif B37_00533 SM00257 Lysin motif B37_00533 SM00646 B37_00533 B37_00541 SM00479 B37_00541 B37_00570 SM00382 ATPases associated with a variety of cellular activities B37_00574 SM00357 Cold shock protein domain B37_00575 SM00382 ATPases associated with a variety of cellular activities B37_00575 SM00930 B37_00575 B37_00584 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) B37_00584 SM00091 PAS domain B37_00584 SM00387 Histidine kinase-like ATPases B37_00584 SM00388 His Kinase A (phosphoacceptor) domain B37_00585 SM00318 Staphylococcal nuclease homologues B37_00589 SM00116 Domain in cystathionine beta-synthase and other proteins. B37_00593 SM00382 ATPases associated with a variety of cellular activities B37_00596 SM00829 Enoylreductase B37_00603 SM00530 Helix-turn-helix XRE-family like proteins B37_00604 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. B37_00604 SM00387 Histidine kinase-like ATPases B37_00605 SM00421 helix_turn_helix, Lux Regulon B37_00605 SM00448 cheY-homologous receiver domain B37_00612 SM00257 Lysin motif B37_00619 SM00342 helix_turn_helix, arabinose operon control protein B37_00619 SM00871 Bacterial transcription activator, effector binding domain B37_00620 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_00627 SM00563 Phosphate acyltransferases B37_00632 SM01091 Transporter associated domain B37_00633 SM00422 helix_turn_helix, mercury resistance B37_00635 SM01091 Transporter associated domain B37_00638 SM00646 B37_00638 B37_00655 SM00382 ATPases associated with a variety of cellular activities B37_00656 SM00382 ATPases associated with a variety of cellular activities B37_00661 SM00382 ATPases associated with a variety of cellular activities B37_00669 SM00729 Elongator protein 3, MiaB family, Radical SAM B37_00674 SM00028 Tetratricopeptide repeats B37_00678 SM00382 ATPases associated with a variety of cellular activities B37_00682 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B37_00688 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_00694 SM00382 ATPases associated with a variety of cellular activities B37_00711 SM00849 Metallo-beta-lactamase superfamily B37_00715 SM00530 Helix-turn-helix XRE-family like proteins B37_00724 SM00855 Phosphoglycerate mutase family B37_00725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B37_00728 SM00914 B37_00728 B37_00753 SM00354 helix_turn _helix lactose operon repressor B37_00765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_00765 SM00387 Histidine kinase-like ATPases B37_00765 SM00388 His Kinase A (phosphoacceptor) domain B37_00766 SM00448 cheY-homologous receiver domain B37_00766 SM00862 Transcriptional regulatory protein, C terminal B37_00793 SM00938 Nitrogen regulatory protein P-II B37_00795 SM00342 helix_turn_helix, arabinose operon control protein B37_00797 SM00354 helix_turn _helix lactose operon repressor B37_00804 SM01006 Siderophore biosynthesis protein domain B37_00809 SM00420 helix_turn_helix, Deoxyribose operon repressor B37_00810 SM01018 B12 binding domain B37_00813 SM00316 Ribosomal protein S1-like RNA-binding domain B37_00819 SM01240 B37_00819 B37_00824 SM00859 Semialdehyde dehydrogenase, NAD binding domain B37_00828 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain B37_00829 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain B37_00840 SM00825 Beta-ketoacyl synthase B37_00842 SM00382 ATPases associated with a variety of cellular activities B37_00843 SM00382 ATPases associated with a variety of cellular activities B37_00855 SM00382 ATPases associated with a variety of cellular activities B37_00856 SM00382 ATPases associated with a variety of cellular activities B37_00864 SM00448 cheY-homologous receiver domain B37_00865 SM00091 PAS domain B37_00865 SM00387 Histidine kinase-like ATPases B37_00872 SM01118 B37_00872 B37_00874 SM00954 Region found in RelA / SpoT proteins B37_00912 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_00918 SM01266 B37_00918 B37_00927 SM00257 Lysin motif B37_00936 SM00530 Helix-turn-helix XRE-family like proteins B37_00937 SM00530 Helix-turn-helix XRE-family like proteins B37_00940 SM00382 ATPases associated with a variety of cellular activities B37_00959 SM00257 Lysin motif B37_00970 SM00644 B37_00970 B37_00972 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_00972 SM00895 B37_00972 B37_00973 SM00829 Enoylreductase B37_00985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_00985 SM00387 Histidine kinase-like ATPases B37_00986 SM00342 helix_turn_helix, arabinose operon control protein B37_00986 SM00448 cheY-homologous receiver domain B37_00991 SM00342 helix_turn_helix, arabinose operon control protein B37_01009 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B37_01014 SM00382 ATPases associated with a variety of cellular activities B37_01017 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain B37_01019 SM00382 ATPases associated with a variety of cellular activities B37_01023 SM00656 B37_01023 B37_01032 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase B37_01036 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_01040 SM00855 Phosphoglycerate mutase family B37_01046 SM00116 Domain in cystathionine beta-synthase and other proteins. B37_01046 SM00924 MgtE intracellular N domain B37_01048 SM00422 helix_turn_helix, mercury resistance B37_01052 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_01054 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen B37_01055 SM00267 diguanylate cyclase B37_01068 SM00091 PAS domain B37_01068 SM00387 Histidine kinase-like ATPases B37_01068 SM00388 His Kinase A (phosphoacceptor) domain B37_01076 SM01007 Class II Aldolase and Adducin N-terminal domain B37_01081 SM00387 Histidine kinase-like ATPases B37_01081 SM00388 His Kinase A (phosphoacceptor) domain B37_01082 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_01085 SM00382 ATPases associated with a variety of cellular activities B37_01085 SM01086 C-terminal, D2-small domain, of ClpB protein B37_01093 SM00028 Tetratricopeptide repeats B37_01096 SM00530 Helix-turn-helix XRE-family like proteins B37_01114 SM00354 helix_turn _helix lactose operon repressor B37_01115 SM01061 CAT RNA binding domain B37_01122 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B37_01122 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_01127 SM00091 PAS domain B37_01127 SM00387 Histidine kinase-like ATPases B37_01127 SM00388 His Kinase A (phosphoacceptor) domain B37_01132 SM00260 Two component signalling adaptor domain B37_01132 SM00448 cheY-homologous receiver domain B37_01135 SM00257 Lysin motif B37_01138 SM00052 Putative diguanylate phosphodiesterase B37_01158 SM00852 Probable molybdopterin binding domain B37_01163 SM00382 ATPases associated with a variety of cellular activities B37_01164 SM00382 ATPases associated with a variety of cellular activities B37_01167 SM00382 ATPases associated with a variety of cellular activities B37_01168 SM01066 Carbohydrate binding domain B37_01169 SM00420 helix_turn_helix, Deoxyribose operon repressor B37_01169 SM01134 B37_01169 B37_01175 SM00382 ATPases associated with a variety of cellular activities B37_01180 SM00966 SpoVT / AbrB like domain B37_01181 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) B37_01181 SM00091 PAS domain B37_01181 SM00387 Histidine kinase-like ATPases B37_01181 SM00388 His Kinase A (phosphoacceptor) domain B37_01184 SM00849 Metallo-beta-lactamase superfamily B37_01192 SM00861 Transketolase, pyrimidine binding domain B37_01209 SM00838 Elongation factor G C-terminus B37_01211 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_01215 SM00670 Large family of predicted nucleotide-binding domains B37_01220 SM00878 Biotin carboxylase C-terminal domain B37_01229 SM00116 Domain in cystathionine beta-synthase and other proteins. B37_01240 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B37_01251 SM00740 B37_01251 B37_01252 SM00740 B37_01252 B37_01264 SM00842 Cell division protein FtsA B37_01265 SM00864 Tubulin/FtsZ family, GTPase domain B37_01265 SM00865 Tubulin/FtsZ family, C-terminal domain B37_01273 SM00382 ATPases associated with a variety of cellular activities B37_01280 SM00363 S4 RNA-binding domain B37_01285 SM00363 S4 RNA-binding domain B37_01290 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain B37_01291 SM00851 MGS-like domain B37_01291 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain B37_01294 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family B37_01305 SM00831 Cation transporter/ATPase, N-terminus B37_01308 SM00072 Guanylate kinase homologues. B37_01309 SM01409 B37_01309 B37_01311 SM00487 DEAD-like helicases superfamily B37_01311 SM00490 helicase superfamily c-terminal domain B37_01316 SM00331 Sigma factor PP2C-like phosphatases B37_01316 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain B37_01317 SM00220 Serine/Threonine protein kinases, catalytic domain B37_01317 SM00740 B37_01317 B37_01320 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain B37_01323 SM01120 B37_01323 B37_01323 SM01121 B37_01323 B37_01326 SM00487 DEAD-like helicases superfamily B37_01326 SM00490 helicase superfamily c-terminal domain B37_01329 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. B37_01330 SM00822 B37_01330 B37_01332 SM00358 Double-stranded RNA binding motif B37_01332 SM00535 Ribonuclease III family B37_01333 SM00968 SMC proteins Flexible Hinge Domain B37_01334 SM00382 ATPases associated with a variety of cellular activities B37_01334 SM00962 SRP54-type protein, GTPase domain B37_01334 SM00963 SRP54-type protein, helical bundle domain B37_01336 SM00382 ATPases associated with a variety of cellular activities B37_01336 SM00962 SRP54-type protein, GTPase domain B37_01336 SM00963 SRP54-type protein, helical bundle domain B37_01348 SM00881 CoA binding domain B37_01350 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain B37_01350 SM00437 Bacterial DNA topoisomerase I DNA-binding domain B37_01350 SM00493 B37_01350 B37_01354 SM00382 ATPases associated with a variety of cellular activities B37_01354 SM01086 C-terminal, D2-small domain, of ClpB protein B37_01363 SM00382 ATPases associated with a variety of cellular activities B37_01372 SM00448 cheY-homologous receiver domain B37_01379 SM00382 ATPases associated with a variety of cellular activities B37_01379 SM00962 SRP54-type protein, GTPase domain B37_01381 SM00448 cheY-homologous receiver domain B37_01382 SM00073 Histidine Phosphotransfer domain B37_01382 SM00260 Two component signalling adaptor domain B37_01382 SM00387 Histidine kinase-like ATPases B37_01382 SM01231 B37_01382 B37_01383 SM00260 Two component signalling adaptor domain B37_01395 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B37_01397 SM00479 B37_01397 B37_01397 SM00481 DNA polymerase alpha chain like domain B37_01399 SM01067 Cellulose binding domain B37_01404 SM00316 Ribosomal protein S1-like RNA-binding domain B37_01404 SM00322 K homology RNA-binding domain B37_01411 SM00904 Riboflavin kinase B37_01412 SM01387 B37_01412 B37_01413 SM00316 Ribosomal protein S1-like RNA-binding domain B37_01413 SM00322 K homology RNA-binding domain B37_01419 SM00859 Semialdehyde dehydrogenase, NAD binding domain B37_01421 SM01130 B37_01421 B37_01422 SM00849 Metallo-beta-lactamase superfamily B37_01425 SM00382 ATPases associated with a variety of cellular activities B37_01425 SM00843 B37_01425 B37_01426 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_01426 SM00866 B37_01426 B37_01433 SM00530 Helix-turn-helix XRE-family like proteins B37_01435 SM00852 Probable molybdopterin binding domain B37_01436 SM00382 ATPases associated with a variety of cellular activities B37_01437 SM00322 K homology RNA-binding domain B37_01437 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B37_01441 SM00829 Enoylreductase B37_01443 SM00729 Elongator protein 3, MiaB family, Radical SAM B37_01446 SM00533 DNA-binding domain of DNA mismatch repair MUTS family B37_01446 SM00534 ATPase domain of DNA mismatch repair MUTS family B37_01447 SM00853 MutL C terminal dimerisation domain B37_01447 SM01340 B37_01447 B37_01452 SM00833 Cobalamin synthesis protein cobW C-terminal domain B37_01470 SM00257 Lysin motif B37_01470 SM00636 B37_01470 B37_01487 SM00849 Metallo-beta-lactamase superfamily B37_01491 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_01491 SM00895 B37_01491 B37_01493 SM00646 B37_01493 B37_01506 SM00860 SMI1 / KNR4 family B37_01511 SM00382 ATPases associated with a variety of cellular activities B37_01514 SM00422 helix_turn_helix, mercury resistance B37_01515 SM01230 B37_01515 B37_01545 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_01548 SM00903 Flavin reductase like domain B37_01555 SM00257 Lysin motif B37_01556 SM00857 Resolvase, N terminal domain B37_01558 SM00861 Transketolase, pyrimidine binding domain B37_01563 SM00448 cheY-homologous receiver domain B37_01577 SM01207 B37_01577 B37_01578 SM00881 CoA binding domain B37_01579 SM00387 Histidine kinase-like ATPases B37_01579 SM00433 TopoisomeraseII B37_01580 SM00434 DNA Topoisomerase IV B37_01581 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_01583 SM01007 Class II Aldolase and Adducin N-terminal domain B37_01594 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B37_01597 SM00729 Elongator protein 3, MiaB family, Radical SAM B37_01600 SM00100 Cyclic nucleotide-monophosphate binding domain B37_01600 SM00419 helix_turn_helix, cAMP Regulatory protein B37_01603 SM00100 Cyclic nucleotide-monophosphate binding domain B37_01603 SM00419 helix_turn_helix, cAMP Regulatory protein B37_01607 SM01067 Cellulose binding domain B37_01614 SM00710 Parallel beta-helix repeats B37_01614 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses B37_01616 SM00829 Enoylreductase B37_01617 SM00422 helix_turn_helix, mercury resistance B37_01633 SM00382 ATPases associated with a variety of cellular activities B37_01634 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_01641 SM00354 helix_turn _helix lactose operon repressor B37_01642 SM00226 Low molecular weight phosphatase family B37_01644 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B37_01655 SM00155 Phospholipase D. Active site motifs. B37_01682 SM00878 Biotin carboxylase C-terminal domain B37_01688 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase B37_01696 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain B37_01707 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_01707 SM00529 Helix-turn-helix diphteria tox regulatory element B37_01708 SM00382 ATPases associated with a variety of cellular activities B37_01709 SM00382 ATPases associated with a variety of cellular activities B37_01711 SM00822 B37_01711 B37_01714 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B37_01715 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_01722 SM00382 ATPases associated with a variety of cellular activities B37_01723 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B37_01723 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_01723 SM00319 Homologues of the ligand binding domain of Tar B37_01728 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_01735 SM00849 Metallo-beta-lactamase superfamily B37_01736 SM00871 Bacterial transcription activator, effector binding domain B37_01740 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B37_01741 SM00849 Metallo-beta-lactamase superfamily B37_01753 SM00257 Lysin motif B37_01754 SM00341 Helicase and RNase D C-terminal B37_01754 SM00487 DEAD-like helicases superfamily B37_01754 SM00490 helicase superfamily c-terminal domain B37_01754 SM00956 B37_01754 B37_01762 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B37_01762 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region B37_01763 SM00860 SMI1 / KNR4 family B37_01775 SM00860 SMI1 / KNR4 family B37_01804 SM00861 Transketolase, pyrimidine binding domain B37_01805 SM00327 von Willebrand factor (vWF) type A domain B37_01806 SM00382 ATPases associated with a variety of cellular activities B37_01808 SM00257 Lysin motif B37_01818 SM00822 B37_01818 B37_01826 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B37_01826 SM00245 tail specific protease B37_01835 SM00014 Acid phosphatase homologues B37_01844 SM00882 Coenzyme A transferase B37_01845 SM00882 Coenzyme A transferase B37_01851 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_01853 SM00267 diguanylate cyclase B37_01863 SM00382 ATPases associated with a variety of cellular activities B37_01872 SM00567 E-Z type HEAT repeats B37_01872 SM00932 Scaffold protein Nfu/NifU N terminal B37_01873 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B37_01879 SM00357 Cold shock protein domain B37_01887 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs B37_01887 SM00475 5'-3' exonuclease B37_01898 SM00491 B37_01898 B37_01901 SM00981 B37_01901 B37_01907 SM00487 DEAD-like helicases superfamily B37_01907 SM00490 helicase superfamily c-terminal domain B37_01917 SM00060 Fibronectin type 3 domain B37_01919 SM00478 endonuclease III B37_01919 SM00525 B37_01919 B37_01925 SM00479 B37_01925 B37_01925 SM00487 DEAD-like helicases superfamily B37_01925 SM00491 B37_01925 B37_01933 SM00851 MGS-like domain B37_01943 SM00914 B37_01943 B37_01944 SM00028 Tetratricopeptide repeats B37_01957 SM00138 Methyltransferase, chemotaxis proteins B37_01958 SM00562 B37_01958 B37_01964 SM00411 bacterial (prokaryotic) histone like domain B37_01975 SM01240 B37_01975 B37_01976 SM00316 Ribosomal protein S1-like RNA-binding domain B37_01982 SM00870 B37_01982 B37_01984 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase B37_01988 SM00257 Lysin motif B37_01990 SM00487 DEAD-like helicases superfamily B37_01990 SM00490 helicase superfamily c-terminal domain B37_01995 SM00257 Lysin motif B37_02001 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_02001 SM00387 Histidine kinase-like ATPases B37_02001 SM00388 His Kinase A (phosphoacceptor) domain B37_02002 SM00448 cheY-homologous receiver domain B37_02002 SM00862 Transcriptional regulatory protein, C terminal B37_02003 SM00091 PAS domain B37_02003 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_02003 SM00387 Histidine kinase-like ATPases B37_02003 SM00388 His Kinase A (phosphoacceptor) domain B37_02004 SM00448 cheY-homologous receiver domain B37_02004 SM00862 Transcriptional regulatory protein, C terminal B37_02008 SM00363 S4 RNA-binding domain B37_02011 SM00936 Penicillin-binding protein 5, C-terminal domain B37_02026 SM00028 Tetratricopeptide repeats B37_02040 SM00387 Histidine kinase-like ATPases B37_02042 SM00936 Penicillin-binding protein 5, C-terminal domain B37_02066 SM00704 CDGSH-type zinc finger. Function unknown. B37_02074 SM00382 ATPases associated with a variety of cellular activities B37_02075 SM00382 ATPases associated with a variety of cellular activities B37_02085 SM00382 ATPases associated with a variety of cellular activities B37_02091 SM00849 Metallo-beta-lactamase superfamily B37_02103 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_02103 SM00866 B37_02103 B37_02108 SM00098 Alkaline phosphatase homologues B37_02110 SM01350 B37_02110 B37_02117 SM00382 ATPases associated with a variety of cellular activities B37_02119 SM00062 Bacterial periplasmic substrate-binding proteins B37_02119 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. B37_02122 SM00046 Diacylglycerol kinase catalytic domain (presumed) B37_02124 SM00861 Transketolase, pyrimidine binding domain B37_02128 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase B37_02130 SM00091 PAS domain B37_02130 SM00382 ATPases associated with a variety of cellular activities B37_02133 SM00646 B37_02133 B37_02137 SM00448 cheY-homologous receiver domain B37_02138 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B37_02141 SM00363 S4 RNA-binding domain B37_02142 SM00861 Transketolase, pyrimidine binding domain B37_02149 SM00878 Biotin carboxylase C-terminal domain B37_02158 SM00382 ATPases associated with a variety of cellular activities B37_02160 SM00841 Elongation factor P, C-terminal B37_02160 SM01185 B37_02160 B37_02167 SM00529 Helix-turn-helix diphteria tox regulatory element B37_02169 SM00450 Rhodanese Homology Domain B37_02172 SM00116 Domain in cystathionine beta-synthase and other proteins. B37_02172 SM00382 ATPases associated with a variety of cellular activities B37_02176 SM00487 DEAD-like helicases superfamily B37_02176 SM00490 helicase superfamily c-terminal domain B37_02179 SM00530 Helix-turn-helix XRE-family like proteins B37_02190 SM00382 ATPases associated with a variety of cellular activities B37_02195 SM00849 Metallo-beta-lactamase superfamily B37_02199 SM00631 B37_02199 B37_02206 SM00028 Tetratricopeptide repeats B37_02214 SM00382 ATPases associated with a variety of cellular activities B37_02215 SM00382 ATPases associated with a variety of cellular activities B37_02230 SM00382 ATPases associated with a variety of cellular activities B37_02233 SM00518 AP endonuclease family 2 B37_02234 SM00487 DEAD-like helicases superfamily B37_02234 SM00490 helicase superfamily c-terminal domain B37_02254 SM00400 zinc finger B37_02254 SM00493 B37_02254 B37_02257 SM00116 Domain in cystathionine beta-synthase and other proteins. B37_02266 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B37_02276 SM01133 B37_02276 B37_02277 SM00729 Elongator protein 3, MiaB family, Radical SAM B37_02280 SM00271 DnaJ molecular chaperone homology domain B37_02284 SM00729 Elongator protein 3, MiaB family, Radical SAM B37_02285 SM00838 Elongation factor G C-terminus B37_02292 SM00849 Metallo-beta-lactamase superfamily B37_02294 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B37_02298 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B37_02300 SM01103 B37_02300 B37_02308 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B37_02308 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region B37_02312 SM01179 B37_02312 B37_02313 SM00382 ATPases associated with a variety of cellular activities B37_02321 SM00487 DEAD-like helicases superfamily B37_02321 SM00491 B37_02321 B37_02324 SM00382 ATPases associated with a variety of cellular activities B37_02326 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_02326 SM00387 Histidine kinase-like ATPases B37_02326 SM00388 His Kinase A (phosphoacceptor) domain B37_02327 SM00448 cheY-homologous receiver domain B37_02327 SM00862 Transcriptional regulatory protein, C terminal B37_02335 SM00450 Rhodanese Homology Domain B37_02335 SM00849 Metallo-beta-lactamase superfamily B37_02337 SM00421 helix_turn_helix, Lux Regulon B37_02337 SM00448 cheY-homologous receiver domain B37_02338 SM00387 Histidine kinase-like ATPases B37_02342 SM00450 Rhodanese Homology Domain B37_02342 SM00849 Metallo-beta-lactamase superfamily B37_02343 SM00450 Rhodanese Homology Domain B37_02349 SM01234 B37_02349 B37_02352 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family B37_02356 SM00421 helix_turn_helix, Lux Regulon B37_02356 SM00448 cheY-homologous receiver domain B37_02361 SM00382 ATPases associated with a variety of cellular activities B37_02362 SM00382 ATPases associated with a variety of cellular activities B37_02363 SM00422 helix_turn_helix, mercury resistance B37_02365 SM00342 helix_turn_helix, arabinose operon control protein B37_02367 SM00014 Acid phosphatase homologues B37_02373 SM00640 Glycosyl hydrolases family 32 B37_02382 SM01059 Chloramphenicol acetyltransferase B37_02383 SM00342 helix_turn_helix, arabinose operon control protein B37_02405 SM00650 Ribosomal RNA adenine dimethylases B37_02416 SM00732 Likely ribonuclease with RNase H fold. B37_02418 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain B37_02422 SM00382 ATPases associated with a variety of cellular activities B37_02423 SM00028 Tetratricopeptide repeats B37_02427 SM00382 ATPases associated with a variety of cellular activities B37_02432 SM00287 Bacterial SH3 domain homologues B37_02432 SM00646 B37_02432 B37_02434 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B37_02434 SM00954 Region found in RelA / SpoT proteins B37_02443 SM01323 B37_02443 B37_02447 SM00382 ATPases associated with a variety of cellular activities B37_02448 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B37_02460 SM00257 Lysin motif B37_02469 SM01317 B37_02469 B37_02476 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B37_02486 SM00028 Tetratricopeptide repeats B37_02489 SM00257 Lysin motif B37_02489 SM00641 Glycosyl hydrolases family 25 B37_02496 SM00047 Lysozyme subfamily 2 B37_02521 SM00891 ERCC4 domain B37_02524 SM00885 D5 N terminal like B37_02533 SM00530 Helix-turn-helix XRE-family like proteins B37_02534 SM00530 Helix-turn-helix XRE-family like proteins B37_02536 SM00857 Resolvase, N terminal domain B37_02545 SM00257 Lysin motif B37_02547 SM01004 Delta-aminolevulinic acid dehydratase B37_02554 SM00382 ATPases associated with a variety of cellular activities B37_02554 SM00464 Found in ATP-dependent protease La (LON) B37_02555 SM00382 ATPases associated with a variety of cellular activities B37_02556 SM00382 ATPases associated with a variety of cellular activities B37_02556 SM00994 ClpX C4-type zinc finger B37_02556 SM01086 C-terminal, D2-small domain, of ClpB protein B37_02561 SM01329 B37_02561 B37_02562 SM00917 LeuA allosteric (dimerisation) domain B37_02568 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase B37_02580 SM00028 Tetratricopeptide repeats B37_02588 SM00909 Sporulation and spore germination B37_02590 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_02591 SM00421 helix_turn_helix, Lux Regulon B37_02599 SM00465 GIY-YIG type nucleases (URI domain) B37_02601 SM00893 Electron transfer flavoprotein domain B37_02602 SM00893 Electron transfer flavoprotein domain B37_02607 SM00463 Small MutS-related domain B37_02607 SM00533 DNA-binding domain of DNA mismatch repair MUTS family B37_02607 SM00534 ATPase domain of DNA mismatch repair MUTS family B37_02608 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B37_02608 SM00481 DNA polymerase alpha chain like domain B37_02608 SM00483 DNA polymerase X family B37_02617 SM00382 ATPases associated with a variety of cellular activities B37_02620 SM00873 B3/4 domain B37_02620 SM00874 tRNA synthetase B5 domain B37_02620 SM00896 Ferredoxin-fold anticodon binding domain B37_02622 SM00967 RNA 2'-O ribose methyltransferase substrate binding B37_02626 SM00813 Alpha-L-arabinofuranosidase C-terminus B37_02631 SM01007 Class II Aldolase and Adducin N-terminal domain B37_02644 SM00448 cheY-homologous receiver domain B37_02644 SM00850 LytTr DNA-binding domain B37_02645 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. B37_02645 SM00387 Histidine kinase-like ATPases B37_02648 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain B37_02651 SM00382 ATPases associated with a variety of cellular activities B37_02656 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B37_02657 SM00656 B37_02657 B37_02660 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain B37_02660 SM01232 B37_02660 B37_02661 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs B37_02661 SM00474 3'-5' exonuclease B37_02661 SM00475 5'-3' exonuclease B37_02661 SM00482 DNA polymerase A domain B37_02662 SM00091 PAS domain B37_02662 SM00387 Histidine kinase-like ATPases B37_02662 SM00388 His Kinase A (phosphoacceptor) domain B37_02663 SM00448 cheY-homologous receiver domain B37_02663 SM00862 Transcriptional regulatory protein, C terminal B37_02665 SM01329 B37_02665 B37_02674 SM00919 Malic enzyme, NAD binding domain B37_02674 SM01274 B37_02674 B37_02675 SM00481 DNA polymerase alpha chain like domain B37_02681 SM00116 Domain in cystathionine beta-synthase and other proteins. B37_02683 SM00849 Metallo-beta-lactamase superfamily B37_02688 SM00852 Probable molybdopterin binding domain B37_02699 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_02702 SM00981 B37_02702 B37_02710 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. B37_02711 SM00267 diguanylate cyclase B37_02712 SM00363 S4 RNA-binding domain B37_02712 SM01390 B37_02712 B37_02716 SM00849 Metallo-beta-lactamase superfamily B37_02717 SM00344 helix_turn_helix ASNC type B37_02719 SM00363 S4 RNA-binding domain B37_02722 SM00116 Domain in cystathionine beta-synthase and other proteins. B37_02726 SM00354 helix_turn _helix lactose operon repressor B37_02727 SM00830 Chorismate mutase type II B37_02734 SM00382 ATPases associated with a variety of cellular activities B37_02734 SM00843 B37_02734 B37_02741 SM00919 Malic enzyme, NAD binding domain B37_02741 SM01274 B37_02741 B37_02742 SM00849 Metallo-beta-lactamase superfamily B37_02746 SM00642 Alpha-amylase domain B37_02748 SM00046 Diacylglycerol kinase catalytic domain (presumed) B37_02755 SM00420 helix_turn_helix, Deoxyribose operon repressor B37_02756 SM00363 S4 RNA-binding domain B37_02761 SM00450 Rhodanese Homology Domain B37_02763 SM00028 Tetratricopeptide repeats B37_02770 SM00342 helix_turn_helix, arabinose operon control protein B37_02784 SM00382 ATPases associated with a variety of cellular activities B37_02786 SM00382 ATPases associated with a variety of cellular activities B37_02787 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_02790 SM00729 Elongator protein 3, MiaB family, Radical SAM B37_02796 SM00014 Acid phosphatase homologues B37_02805 SM00382 ATPases associated with a variety of cellular activities B37_02814 SM01234 B37_02814 B37_02815 SM00947 Carbonic anhydrase B37_02816 SM00833 Cobalamin synthesis protein cobW C-terminal domain B37_02823 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain B37_02836 SM00642 Alpha-amylase domain B37_02861 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_02866 SM00028 Tetratricopeptide repeats B37_02879 SM01005 Alanine racemase, C-terminal domain B37_02880 SM00835 Cupin B37_02902 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B37_02902 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_02902 SM00319 Homologues of the ligand binding domain of Tar B37_02903 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B37_02903 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_02903 SM00319 Homologues of the ligand binding domain of Tar B37_02904 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B37_02904 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_02905 SM00319 Homologues of the ligand binding domain of Tar B37_02909 SM00642 Alpha-amylase domain B37_02913 SM00116 Domain in cystathionine beta-synthase and other proteins. B37_02913 SM01091 Transporter associated domain B37_02931 SM00644 B37_02931 B37_02937 SM00710 Parallel beta-helix repeats B37_02938 SM00047 Lysozyme subfamily 2 B37_02955 SM00507 HNH nucleases B37_02963 SM00891 ERCC4 domain B37_02965 SM00885 D5 N terminal like B37_02974 SM00530 Helix-turn-helix XRE-family like proteins B37_02980 SM00316 Ribosomal protein S1-like RNA-binding domain B37_02982 SM00344 helix_turn_helix ASNC type B37_02988 SM01298 B37_02988 B37_02989 SM00479 B37_02989 B37_02994 SM00091 PAS domain B37_02994 SM00387 Histidine kinase-like ATPases B37_02995 SM00448 cheY-homologous receiver domain B37_03009 SM00421 helix_turn_helix, Lux Regulon B37_03009 SM00448 cheY-homologous receiver domain B37_03010 SM00387 Histidine kinase-like ATPases B37_03016 SM00052 Putative diguanylate phosphodiesterase B37_03026 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B37_03036 SM01002 Alanine dehydrogenase/PNT, C-terminal domain B37_03036 SM01003 Alanine dehydrogenase/PNT, N-terminal domain B37_03057 SM00028 Tetratricopeptide repeats B37_03073 SM00729 Elongator protein 3, MiaB family, Radical SAM B37_03093 SM01092 CO dehydrogenase flavoprotein C-terminal domain B37_03098 SM00028 Tetratricopeptide repeats B37_03103 SM00382 ATPases associated with a variety of cellular activities B37_03108 SM00382 ATPases associated with a variety of cellular activities B37_03108 SM00930 B37_03108 B37_03111 SM00493 B37_03111 B37_03123 SM00382 ATPases associated with a variety of cellular activities B37_03132 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B37_03133 SM00448 cheY-homologous receiver domain B37_03133 SM00862 Transcriptional regulatory protein, C terminal B37_03134 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_03134 SM00387 Histidine kinase-like ATPases B37_03134 SM00388 His Kinase A (phosphoacceptor) domain B37_03143 SM00421 helix_turn_helix, Lux Regulon B37_03143 SM00448 cheY-homologous receiver domain B37_03144 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_03144 SM00387 Histidine kinase-like ATPases B37_03154 SM01130 B37_03154 B37_03155 SM00382 ATPases associated with a variety of cellular activities B37_03158 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_03158 SM00895 B37_03158 B37_03162 SM00710 Parallel beta-helix repeats B37_03163 SM00858 B37_03163 B37_03165 SM00354 helix_turn _helix lactose operon repressor B37_03168 SM00387 Histidine kinase-like ATPases B37_03168 SM00388 His Kinase A (phosphoacceptor) domain B37_03169 SM00448 cheY-homologous receiver domain B37_03169 SM00862 Transcriptional regulatory protein, C terminal B37_03170 SM00382 ATPases associated with a variety of cellular activities B37_03193 SM00606 Cellulose Binding Domain Type IV B37_03193 SM01217 B37_03193 B37_03194 SM00382 ATPases associated with a variety of cellular activities B37_03209 SM00420 helix_turn_helix, Deoxyribose operon repressor B37_03209 SM01134 B37_03209 B37_03213 SM01007 Class II Aldolase and Adducin N-terminal domain B37_03220 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_03226 SM00450 Rhodanese Homology Domain B37_03230 SM00835 Cupin B37_03242 SM00316 Ribosomal protein S1-like RNA-binding domain B37_03242 SM00357 Cold shock protein domain B37_03242 SM00955 B37_03242 B37_03245 SM00966 SpoVT / AbrB like domain B37_03246 SM00530 Helix-turn-helix XRE-family like proteins B37_03247 SM00530 Helix-turn-helix XRE-family like proteins B37_03248 SM00530 Helix-turn-helix XRE-family like proteins B37_03252 SM00116 Domain in cystathionine beta-synthase and other proteins. B37_03252 SM00382 ATPases associated with a variety of cellular activities B37_03261 SM01192 B37_03261 B37_03261 SM01193 B37_03261 B37_03265 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B37_03270 SM00382 ATPases associated with a variety of cellular activities B37_03275 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_03275 SM00895 B37_03275 B37_03294 SM00530 Helix-turn-helix XRE-family like proteins B37_03301 SM01130 B37_03301 B37_03306 SM00640 Glycosyl hydrolases family 32 B37_03312 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B37_03314 SM00947 Carbonic anhydrase B37_03317 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B37_03327 SM00028 Tetratricopeptide repeats B37_03344 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_03353 SM00382 ATPases associated with a variety of cellular activities B37_03354 SM00487 DEAD-like helicases superfamily B37_03354 SM00490 helicase superfamily c-terminal domain B37_03357 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B37_03359 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B37_03359 SM00245 tail specific protease B37_03360 SM01329 B37_03360 B37_03363 SM00382 ATPases associated with a variety of cellular activities B37_03366 SM00937 B37_03366 B37_03367 SM00957 SecA DEAD-like domain B37_03367 SM00958 SecA preprotein cross-linking domain B37_03384 SM00487 DEAD-like helicases superfamily B37_03384 SM00490 helicase superfamily c-terminal domain B37_03386 SM00421 helix_turn_helix, Lux Regulon B37_03386 SM00448 cheY-homologous receiver domain B37_03387 SM00387 Histidine kinase-like ATPases B37_03397 SM00984 UDP binding domain B37_03401 SM00646 B37_03401 B37_03407 SM00382 ATPases associated with a variety of cellular activities B37_03415 SM00047 Lysozyme subfamily 2 B37_03415 SM00287 Bacterial SH3 domain homologues B37_03422 SM00354 helix_turn _helix lactose operon repressor B37_03432 SM00854 Bacterial capsule synthesis protein PGA_cap B37_03435 SM00354 helix_turn _helix lactose operon repressor B37_03438 SM00382 ATPases associated with a variety of cellular activities B37_03447 SM00344 helix_turn_helix ASNC type B37_03454 SM00487 DEAD-like helicases superfamily B37_03454 SM00490 helicase superfamily c-terminal domain B37_03457 SM00420 helix_turn_helix, Deoxyribose operon repressor B37_03457 SM01134 B37_03457 B37_03474 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_03476 SM00014 Acid phosphatase homologues B37_03477 SM01131 B37_03477 B37_03480 SM00116 Domain in cystathionine beta-synthase and other proteins. B37_03481 SM00116 Domain in cystathionine beta-synthase and other proteins. B37_03483 SM00116 Domain in cystathionine beta-synthase and other proteins. B37_03483 SM01091 Transporter associated domain B37_03485 SM00938 Nitrogen regulatory protein P-II B37_03491 SM00155 Phospholipase D. Active site motifs. B37_03494 SM00923 MbtH-like protein B37_03495 SM00823 Phosphopantetheine attachment site B37_03495 SM00824 Thioesterase B37_03499 SM00822 B37_03499 B37_03504 SM00342 helix_turn_helix, arabinose operon control protein B37_03510 SM00729 Elongator protein 3, MiaB family, Radical SAM B37_03514 SM00327 von Willebrand factor (vWF) type A domain B37_03515 SM00327 von Willebrand factor (vWF) type A domain B37_03521 SM00382 ATPases associated with a variety of cellular activities B37_03533 SM00226 Low molecular weight phosphatase family B37_03542 SM00354 helix_turn _helix lactose operon repressor B37_03544 SM00937 B37_03544 B37_03548 SM00919 Malic enzyme, NAD binding domain B37_03548 SM01274 B37_03548 B37_03551 SM00357 Cold shock protein domain B37_03551 SM00382 ATPases associated with a variety of cellular activities B37_03551 SM00959 Rho termination factor, N-terminal domain B37_03556 SM00448 cheY-homologous receiver domain B37_03567 SM00155 Phospholipase D. Active site motifs. B37_03569 SM00836 DALR anticodon binding domain B37_03569 SM01016 Arginyl tRNA synthetase N terminal dom B37_03580 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B37_03591 SM00346 helix_turn_helix isocitrate lyase regulation B37_03600 SM00382 ATPases associated with a variety of cellular activities B37_03602 SM00421 helix_turn_helix, Lux Regulon B37_03602 SM00448 cheY-homologous receiver domain B37_03607 SM00986 Uracil DNA glycosylase superfamily B37_03607 SM00987 UreE urease accessory protein, C-terminal domain B37_03611 SM00640 Glycosyl hydrolases family 32 B37_03613 SM01061 CAT RNA binding domain B37_03628 SM00382 ATPases associated with a variety of cellular activities B37_03629 SM00382 ATPases associated with a variety of cellular activities B37_03633 SM00421 helix_turn_helix, Lux Regulon B37_03633 SM00448 cheY-homologous receiver domain B37_03658 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase B37_03663 SM00387 Histidine kinase-like ATPases B37_03664 SM00421 helix_turn_helix, Lux Regulon B37_03664 SM00448 cheY-homologous receiver domain B37_03668 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain B37_03671 SM00346 helix_turn_helix isocitrate lyase regulation B37_03675 SM00954 Region found in RelA / SpoT proteins B37_03691 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_03691 SM00895 B37_03691 B37_03697 SM00382 ATPases associated with a variety of cellular activities B37_03703 SM00382 ATPases associated with a variety of cellular activities B37_03709 SM01060 B37_03709 B37_03710 SM01060 B37_03710 B37_03714 SM00382 ATPases associated with a variety of cellular activities B37_03717 SM00382 ATPases associated with a variety of cellular activities B37_03719 SM00530 Helix-turn-helix XRE-family like proteins B37_03722 SM00382 ATPases associated with a variety of cellular activities B37_03723 SM01260 B37_03723 B37_03726 SM01260 B37_03726 B37_03727 SM00656 B37_03727 B37_03729 SM00382 ATPases associated with a variety of cellular activities B37_03730 SM00382 ATPases associated with a variety of cellular activities B37_03735 SM00919 Malic enzyme, NAD binding domain B37_03735 SM01274 B37_03735 B37_03738 SM00870 B37_03738 B37_03739 SM00530 Helix-turn-helix XRE-family like proteins B37_03741 SM00448 cheY-homologous receiver domain B37_03741 SM00862 Transcriptional regulatory protein, C terminal B37_03742 SM00387 Histidine kinase-like ATPases B37_03743 SM00382 ATPases associated with a variety of cellular activities B37_03755 SM00894 Excalibur calcium-binding domain B37_03765 SM00100 Cyclic nucleotide-monophosphate binding domain B37_03765 SM00419 helix_turn_helix, cAMP Regulatory protein B37_03774 SM00382 ATPases associated with a variety of cellular activities B37_03776 SM00640 Glycosyl hydrolases family 32 B37_03778 SM00354 helix_turn _helix lactose operon repressor B37_03791 SM01060 B37_03791 B37_03792 SM01060 B37_03792 B37_03793 SM00871 Bacterial transcription activator, effector binding domain B37_03796 SM01061 CAT RNA binding domain B37_03798 SM00382 ATPases associated with a variety of cellular activities B37_03807 SM00382 ATPases associated with a variety of cellular activities B37_03808 SM00387 Histidine kinase-like ATPases B37_03809 SM00448 cheY-homologous receiver domain B37_03809 SM00862 Transcriptional regulatory protein, C terminal B37_03822 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain B37_03824 SM01133 B37_03824 B37_03828 SM00267 diguanylate cyclase B37_03848 SM00420 helix_turn_helix, Deoxyribose operon repressor B37_03848 SM01134 B37_03848 B37_03852 SM00387 Histidine kinase-like ATPases B37_03853 SM00382 ATPases associated with a variety of cellular activities B37_03863 SM00899 B37_03863 B37_03866 SM00382 ATPases associated with a variety of cellular activities B37_03867 SM00387 Histidine kinase-like ATPases B37_03867 SM00388 His Kinase A (phosphoacceptor) domain B37_03868 SM00448 cheY-homologous receiver domain B37_03868 SM00862 Transcriptional regulatory protein, C terminal B37_03870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B37_03870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_03872 SM01002 Alanine dehydrogenase/PNT, C-terminal domain B37_03872 SM01003 Alanine dehydrogenase/PNT, N-terminal domain B37_03878 SM00354 helix_turn _helix lactose operon repressor B37_03883 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_03883 SM00895 B37_03883 B37_03886 SM01350 B37_03886 B37_03892 SM00465 GIY-YIG type nucleases (URI domain) B37_03894 SM00382 ATPases associated with a variety of cellular activities B37_03898 SM00421 helix_turn_helix, Lux Regulon B37_03898 SM00448 cheY-homologous receiver domain B37_03901 SM00382 ATPases associated with a variety of cellular activities B37_03910 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B37_03911 SM00849 Metallo-beta-lactamase superfamily B37_03914 SM00091 PAS domain B37_03914 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_03914 SM00387 Histidine kinase-like ATPases B37_03914 SM00388 His Kinase A (phosphoacceptor) domain B37_03915 SM00448 cheY-homologous receiver domain B37_03915 SM00862 Transcriptional regulatory protein, C terminal B37_03921 SM00788 Adenylosuccinate synthetase B37_03923 SM00382 ATPases associated with a variety of cellular activities B37_03930 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_03930 SM00866 B37_03930 B37_03934 SM00267 diguanylate cyclase B37_03947 SM00470 ParB-like nuclease domain B37_03951 SM00470 ParB-like nuclease domain B37_03953 SM01228 B37_03953 B37_03955 SM00393 Putative single-stranded nucleic acids-binding domain B37_03955 SM01245 B37_03955 B37_03958 SM00382 ATPases associated with a variety of cellular activities B37_03958 SM00760 Bacterial dnaA protein helix-turn-helix domain B37_03959 SM00480 DNA polymerase III beta subunit B37_03962 SM00387 Histidine kinase-like ATPases B37_03962 SM00433 TopoisomeraseII B37_03963 SM00434 DNA Topoisomerase IV B37_03970 SM00116 Domain in cystathionine beta-synthase and other proteins. B37_03970 SM01240 B37_03970 B37_03971 SM00936 Penicillin-binding protein 5, C-terminal domain B37_03979 SM00860 SMI1 / KNR4 family B37_03983 SM00257 Lysin motif B37_03983 SM00636 B37_03983 B37_03986 SM00382 ATPases associated with a variety of cellular activities B37_03988 SM00493 B37_03988 B37_04007 SM00465 GIY-YIG type nucleases (URI domain) B37_04009 SM00966 SpoVT / AbrB like domain B37_04012 SM01208 B37_04012 B37_04013 SM00493 B37_04013 B37_04014 SM00650 Ribosomal RNA adenine dimethylases B37_04024 SM01400 B37_04024 B37_04028 SM00487 DEAD-like helicases superfamily B37_04028 SM00490 helicase superfamily c-terminal domain B37_04028 SM00982 B37_04028 B37_04028 SM01058 CarD-like/TRCF domain B37_04029 SM00966 SpoVT / AbrB like domain B37_04032 SM00363 S4 RNA-binding domain B37_04036 SM00316 Ribosomal protein S1-like RNA-binding domain B37_04039 SM00331 Sigma factor PP2C-like phosphatases B37_04039 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain B37_04041 SM00220 Serine/Threonine protein kinases, catalytic domain B37_04042 SM00977 TilS substrate C-terminal domain B37_04044 SM00382 ATPases associated with a variety of cellular activities B37_04053 SM00905 Dihydroneopterin aldolase B37_04055 SM00530 Helix-turn-helix XRE-family like proteins B37_04076 SM00382 ATPases associated with a variety of cellular activities B37_04076 SM01086 C-terminal, D2-small domain, of ClpB protein B37_04077 SM00382 ATPases associated with a variety of cellular activities B37_04079 SM00670 Large family of predicted nucleotide-binding domains B37_04084 SM00840 B37_04084 B37_04085 SM00535 Ribonuclease III family B37_04086 SM00967 RNA 2'-O ribose methyltransferase substrate binding B37_04090 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. B37_04090 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. B37_04091 SM00649 Ribosomal protein L11/L12 B37_04097 SM00663 RNA polymerase I subunit A N-terminus B37_04101 SM00838 Elongation factor G C-terminus B37_04101 SM00889 Elongation factor G, domain IV B37_04103 SM01403 B37_04103 B37_04107 SM01382 B37_04107 B37_04107 SM01383 B37_04107 B37_04110 SM00322 K homology RNA-binding domain B37_04114 SM01374 B37_04114 B37_04115 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. B37_04128 SM00316 Ribosomal protein S1-like RNA-binding domain B37_04132 SM00662 RNA polymerases D B37_04134 SM00382 ATPases associated with a variety of cellular activities B37_04135 SM00382 ATPases associated with a variety of cellular activities B37_04142 SM00646 B37_04142 B37_04145 SM01251 B37_04145 B37_04179 SM00382 ATPases associated with a variety of cellular activities B37_04180 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_04181 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B37_04184 SM00382 ATPases associated with a variety of cellular activities B37_04194 SM00448 cheY-homologous receiver domain B37_04195 SM00091 PAS domain B37_04195 SM00387 Histidine kinase-like ATPases B37_04203 SM00871 Bacterial transcription activator, effector binding domain B37_04216 SM00342 helix_turn_helix, arabinose operon control protein B37_04218 SM00530 Helix-turn-helix XRE-family like proteins B37_04219 SM00421 helix_turn_helix, Lux Regulon B37_04221 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B37_04221 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_04231 SM00422 helix_turn_helix, mercury resistance B37_04237 SM00387 Histidine kinase-like ATPases B37_04238 SM00448 cheY-homologous receiver domain B37_04246 SM01130 B37_04246 B37_04249 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain B37_04250 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_04250 SM00895 B37_04250 B37_04251 SM00858 B37_04251 B37_04252 SM00448 cheY-homologous receiver domain B37_04252 SM00862 Transcriptional regulatory protein, C terminal B37_04253 SM00387 Histidine kinase-like ATPases B37_04253 SM00388 His Kinase A (phosphoacceptor) domain B37_04254 SM00382 ATPases associated with a variety of cellular activities B37_04260 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_04262 SM00093 SERine Proteinase INhibitors B37_04265 SM00422 helix_turn_helix, mercury resistance B37_04273 SM00382 ATPases associated with a variety of cellular activities B37_04276 SM00448 cheY-homologous receiver domain B37_04276 SM00862 Transcriptional regulatory protein, C terminal B37_04277 SM00387 Histidine kinase-like ATPases B37_04277 SM00388 His Kinase A (phosphoacceptor) domain B37_04280 SM00822 B37_04280 B37_04296 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_04296 SM00866 B37_04296 B37_04298 SM00060 Fibronectin type 3 domain B37_04298 SM00495 Chitin-binding domain type 3 B37_04298 SM00636 B37_04298 B37_04300 SM00636 B37_04300 B37_04305 SM00450 Rhodanese Homology Domain B37_04310 SM00382 ATPases associated with a variety of cellular activities B37_04325 SM00422 helix_turn_helix, mercury resistance B37_04341 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_04345 SM00062 Bacterial periplasmic substrate-binding proteins B37_04347 SM00382 ATPases associated with a variety of cellular activities B37_04351 SM00219 Tyrosine kinase, catalytic domain B37_04352 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B37_04353 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_04358 SM00382 ATPases associated with a variety of cellular activities B37_04361 SM00823 Phosphopantetheine attachment site B37_04362 SM00823 Phosphopantetheine attachment site B37_04363 SM00823 Phosphopantetheine attachment site B37_04366 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_04372 SM00382 ATPases associated with a variety of cellular activities B37_04377 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B37_04377 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_04378 SM00382 ATPases associated with a variety of cellular activities B37_04380 SM00062 Bacterial periplasmic substrate-binding proteins B37_04381 SM00382 ATPases associated with a variety of cellular activities B37_04401 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_04401 SM00387 Histidine kinase-like ATPases B37_04402 SM00342 helix_turn_helix, arabinose operon control protein B37_04402 SM00448 cheY-homologous receiver domain B37_04404 SM00382 ATPases associated with a variety of cellular activities B37_04407 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_04411 SM00710 Parallel beta-helix repeats B37_04416 SM00422 helix_turn_helix, mercury resistance B37_04417 SM00382 ATPases associated with a variety of cellular activities B37_04419 SM00448 cheY-homologous receiver domain B37_04419 SM00862 Transcriptional regulatory protein, C terminal B37_04420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_04420 SM00387 Histidine kinase-like ATPases B37_04420 SM00388 His Kinase A (phosphoacceptor) domain B37_04421 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B37_04422 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B37_04426 SM00382 ATPases associated with a variety of cellular activities B37_04433 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B37_04434 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_04442 SM00420 helix_turn_helix, Deoxyribose operon repressor B37_04444 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B37_04448 SM00345 helix_turn_helix gluconate operon transcriptional repressor B37_04448 SM00895 B37_04448 B37_04455 SM00861 Transketolase, pyrimidine binding domain B37_04460 SM00796 Allophanate hydrolase subunit 1 B37_04461 SM00797 Allophanate hydrolase subunit 2 B37_04462 SM00346 helix_turn_helix isocitrate lyase regulation B37_04476 SM00344 helix_turn_helix ASNC type B37_04477 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain B37_04477 SM00437 Bacterial DNA topoisomerase I DNA-binding domain B37_04477 SM00493 B37_04477 B37_04497 SM00382 ATPases associated with a variety of cellular activities B37_04507 SM00487 DEAD-like helicases superfamily B37_04507 SM00490 helicase superfamily c-terminal domain B37_04512 SM01005 Alanine racemase, C-terminal domain B37_04517 SM00387 Histidine kinase-like ATPases B37_04518 SM00331 Sigma factor PP2C-like phosphatases B37_04520 SM00387 Histidine kinase-like ATPases B37_04522 SM00331 Sigma factor PP2C-like phosphatases B37_04523 SM00316 Ribosomal protein S1-like RNA-binding domain B37_04523 SM00732 Likely ribonuclease with RNase H fold. B37_04526 SM00731 SprT homologues. B37_04535 SM00530 Helix-turn-helix XRE-family like proteins B37_04537 SM00357 Cold shock protein domain B37_04538 SM00829 Enoylreductase B37_04541 SM00347 helix_turn_helix multiple antibiotic resistance protein B37_04559 SM00387 Histidine kinase-like ATPases B37_04559 SM00388 His Kinase A (phosphoacceptor) domain B37_04559 SM00448 cheY-homologous receiver domain B37_04560 SM00448 cheY-homologous receiver domain B37_04560 SM00862 Transcriptional regulatory protein, C terminal B37_04576 SM00382 ATPases associated with a variety of cellular activities B37_04578 SM00881 CoA binding domain B37_04583 SM00883 Chaperonin 10 Kd subunit B37_04586 SM00530 Helix-turn-helix XRE-family like proteins B37_04587 SM00530 Helix-turn-helix XRE-family like proteins