locus-tag class description BG04_10 PF17763 Glutaminase/Asparaginase C-terminal domain BG04_10 PF00710 Asparaginase, N-terminal BG04_1000 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BG04_1001 PF02683 Cytochrome C biogenesis protein transmembrane region BG04_1002 PF09388 Spo0E like sporulation regulatory protein BG04_1003 PF00664 ABC transporter transmembrane region BG04_1003 PF00005 ABC transporter BG04_1004 PF00664 ABC transporter transmembrane region BG04_1004 PF00005 ABC transporter BG04_1005 PF03672 Uncharacterised protein family (UPF0154) BG04_1006 PF10747 Sporulation inhibitor of replication protein SirA BG04_1007 PF00456 Transketolase, thiamine diphosphate binding domain BG04_1007 PF02779 Transketolase, pyrimidine binding domain BG04_1007 PF02780 Transketolase, C-terminal domain BG04_1008 PF05979 Bacterial protein of unknown function (DUF896) BG04_1009 PF00239 Resolvase, N terminal domain BG04_1010 PF01476 LysM domain BG04_1011 PF01726 LexA DNA binding domain BG04_1011 PF00717 Peptidase S24-like BG04_1013 PF16916 Dimerisation domain of Zinc Transporter BG04_1013 PF01545 Cation efflux family BG04_1014 PF13520 Amino acid permease BG04_1015 PF01520 N-acetylmuramoyl-L-alanine amidase BG04_1015 PF05036 Sporulation related domain BG04_1016 PF03951 Glutamine synthetase, beta-Grasp domain BG04_1016 PF00120 Glutamine synthetase, catalytic domain BG04_1017 PF13411 MerR HTH family regulatory protein BG04_1018 PF06838 Methionine gamma-lyase BG04_1019 PF01926 50S ribosome-binding GTPase BG04_1019 PF13167 GTP-binding GTPase N-terminal BG04_1019 PF16360 GTP-binding GTPase Middle Region BG04_1020 PF03458 UPF0126 domain BG04_1021 PF17866 AAA lid domain BG04_1021 PF00004 ATPase family associated with various cellular activities (AAA) BG04_1022 PF17209 Hfq protein BG04_1024 PF01119 DNA mismatch repair protein, C-terminal domain BG04_1024 PF08676 MutL C terminal dimerisation domain BG04_1025 PF05188 MutS domain II BG04_1025 PF01624 MutS domain I BG04_1025 PF05190 MutS family domain IV BG04_1025 PF05192 MutS domain III BG04_1025 PF00488 MutS domain V BG04_1026 PF13520 Amino acid permease BG04_1027 PF10628 Outer spore coat protein E (CotE) BG04_1028 PF06133 Control of competence regulator ComK, YlbF/YmcA BG04_1029 PF00919 Uncharacterized protein family UPF0004 BG04_1029 PF01938 TRAM domain BG04_1029 PF04055 Radical SAM superfamily BG04_1030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BG04_1031 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BG04_1031 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BG04_1031 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BG04_1033 PF04232 Stage V sporulation protein S (SpoVS) BG04_1034 PF13277 YmdB-like protein BG04_1035 PF01966 HD domain BG04_1035 PF00013 KH domain BG04_1035 PF12072 Domain of unknown function (DUF3552) BG04_1036 PF00154 recA bacterial DNA recombination protein BG04_1037 PF18146 Damage-inducible protein CinA KH domain BG04_1037 PF02464 Competence-damaged protein BG04_1037 PF00994 Probable molybdopterin binding domain BG04_1038 PF01066 CDP-alcohol phosphatidyltransferase BG04_1039 PF13464 Domain of unknown function (DUF4115) BG04_1040 PF11868 Protein of unknown function (DUF3388) BG04_1041 PF11588 Protein of unknown function (DUF3243) BG04_1043 PF00675 Insulinase (Peptidase family M16) BG04_1043 PF05193 Peptidase M16 inactive domain BG04_1044 PF05193 Peptidase M16 inactive domain BG04_1049 PF00392 Bacterial regulatory proteins, gntR family BG04_1049 PF07702 UTRA domain BG04_105 PF00475 Imidazoleglycerol-phosphate dehydratase BG04_105 PF08645 Polynucleotide kinase 3 phosphatase BG04_1050 PF01580 FtsK/SpoIIIE family BG04_1050 PF17854 FtsK alpha domain BG04_1050 PF09397 Ftsk gamma domain BG04_1051 PF14035 YlzJ-like protein BG04_1052 PF00574 Clp protease BG04_1053 PF17770 Ribonuclease J C-terminal domain BG04_1053 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BG04_1053 PF00753 Metallo-beta-lactamase superfamily BG04_1054 PF00701 Dihydrodipicolinate synthetase family BG04_1055 PF13840 ACT domain BG04_1055 PF00696 Amino acid kinase family BG04_1056 PF01118 Semialdehyde dehydrogenase, NAD binding domain BG04_1056 PF02774 Semialdehyde dehydrogenase, dimerisation domain BG04_1057 PF02441 Flavoprotein BG04_1058 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BG04_1058 PF16924 Dipicolinate synthase subunit A N-terminal domain BG04_1059 PF05239 PRC-barrel domain BG04_106 PF00440 Bacterial regulatory proteins, tetR family BG04_1060 PF05193 Peptidase M16 inactive domain BG04_1060 PF00675 Insulinase (Peptidase family M16) BG04_1061 PF01522 Polysaccharide deacetylase BG04_1062 PF00013 KH domain BG04_1062 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BG04_1062 PF01138 3' exoribonuclease family, domain 1 BG04_1062 PF03725 3' exoribonuclease family, domain 2 BG04_1062 PF00575 S1 RNA binding domain BG04_1063 PF00312 Ribosomal protein S15 BG04_1064 PF01687 Riboflavin kinase BG04_1064 PF06574 FAD synthetase BG04_1065 PF01509 TruB family pseudouridylate synthase (N terminal domain) BG04_1065 PF16198 tRNA pseudouridylate synthase B C-terminal domain BG04_1066 PF02033 Ribosome-binding factor A BG04_1067 PF04456 Protein of unknown function (DUF503) BG04_1068 PF04760 Translation initiation factor IF-2, N-terminal region BG04_1068 PF00009 Elongation factor Tu GTP binding domain BG04_1068 PF11987 Translation-initiation factor 2 BG04_1069 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BG04_107 PF00893 Small Multidrug Resistance protein BG04_1070 PF04296 Protein of unknown function (DUF448) BG04_1071 PF00575 S1 RNA binding domain BG04_1071 PF08529 NusA N-terminal domain BG04_1071 PF13184 NusA-like KH domain BG04_1072 PF02576 RimP N-terminal domain BG04_1072 PF17384 RimP C-terminal SH3 domain BG04_1073 PF00929 Exonuclease BG04_1073 PF07733 Bacterial DNA polymerase III alpha NTPase domain BG04_1073 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BG04_1073 PF14579 Helix-hairpin-helix motif BG04_1073 PF02811 PHP domain BG04_1073 PF14480 DNA polymerase III polC-type N-terminus I BG04_1073 PF11490 DNA polymerase III polC-type N-terminus II BG04_1074 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BG04_1074 PF04073 Aminoacyl-tRNA editing domain BG04_1074 PF03129 Anticodon binding domain BG04_1075 PF02163 Peptidase family M50 BG04_1075 PF13180 PDZ domain BG04_1076 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BG04_1076 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BG04_1076 PF13288 DXP reductoisomerase C-terminal domain BG04_1078 PF01255 Putative undecaprenyl diphosphate synthase BG04_1079 PF01765 Ribosome recycling factor BG04_108 PF03144 Elongation factor Tu domain 2 BG04_108 PF00009 Elongation factor Tu GTP binding domain BG04_108 PF16658 Class II release factor RF3, C-terminal domain BG04_1080 PF00696 Amino acid kinase family BG04_1081 PF00889 Elongation factor TS BG04_1082 PF00318 Ribosomal protein S2 BG04_1084 PF04542 Sigma-70 region 2 BG04_1084 PF04539 Sigma-70 region 3 BG04_1084 PF04545 Sigma-70, region 4 BG04_1085 PF03975 CheD chemotactic sensory transduction BG04_1086 PF01584 CheW-like domain BG04_1087 PF07194 P2 response regulator binding domain BG04_1087 PF01627 Hpt domain BG04_1087 PF02895 Signal transducing histidine kinase, homodimeric domain BG04_1087 PF01584 CheW-like domain BG04_1087 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_1088 PF01339 CheB methylesterase BG04_1088 PF00072 Response regulator receiver domain BG04_1089 PF10609 NUBPL iron-transfer P-loop NTPase BG04_109 PF00313 'Cold-shock' DNA-binding domain BG04_1090 PF00448 SRP54-type protein, GTPase domain BG04_1091 PF00771 FHIPEP family BG04_1092 PF01312 FlhB HrpN YscU SpaS Family BG04_1093 PF01311 Bacterial export proteins, family 1 BG04_1094 PF01313 Bacterial export proteins, family 3 BG04_1095 PF00813 FliP family BG04_1096 PF04347 Flagellar biosynthesis protein, FliO BG04_1097 PF00072 Response regulator receiver domain BG04_1098 PF04509 CheC-like family BG04_1098 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BG04_1099 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BG04_1099 PF02154 Flagellar motor switch protein FliM BG04_11 PF01381 Helix-turn-helix BG04_110 PF04239 Protein of unknown function (DUF421) BG04_1101 PF06289 Flagellar and Swarming motility proteins BG04_1102 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BG04_1102 PF00460 Flagella basal body rod protein BG04_1103 PF03963 Flagellar hook capping protein - N-terminal region BG04_1106 PF02050 Flagellar FliJ protein BG04_1107 PF02874 ATP synthase alpha/beta family, beta-barrel domain BG04_1107 PF18269 T3SS EscN ATPase C-terminal domain BG04_1107 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BG04_1108 PF02108 Flagellar assembly protein FliH BG04_1109 PF14842 FliG N-terminal domain BG04_1109 PF14841 FliG middle domain BG04_1109 PF01706 FliG C-terminal domain BG04_1110 PF01514 Secretory protein of YscJ/FliF family BG04_1110 PF08345 Flagellar M-ring protein C-terminal BG04_1111 PF02049 Flagellar hook-basal body complex protein FliE BG04_1112 PF00460 Flagella basal body rod protein BG04_1112 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BG04_1113 PF00460 Flagella basal body rod protein BG04_1114 PF06018 CodY GAF-like domain BG04_1114 PF08222 CodY helix-turn-helix domain BG04_1115 PF00004 ATPase family associated with various cellular activities (AAA) BG04_1115 PF10431 C-terminal, D2-small domain, of ClpB protein BG04_1115 PF07724 AAA domain (Cdc48 subfamily) BG04_1116 PF00227 Proteasome subunit BG04_1117 PF00589 Phage integrase family BG04_1117 PF02899 Phage integrase, N-terminal SAM-like domain BG04_1118 PF01134 Glucose inhibited division protein A BG04_1119 PF01131 DNA topoisomerase BG04_1119 PF01751 Toprim domain BG04_1119 PF01396 Topoisomerase DNA binding C4 zinc finger BG04_1120 PF02481 DNA recombination-mediator protein A BG04_1121 PF00549 CoA-ligase BG04_1121 PF02629 CoA binding domain BG04_1122 PF00549 CoA-ligase BG04_1122 PF08442 ATP-grasp domain BG04_1123 PF01351 Ribonuclease HII BG04_1124 PF01926 50S ribosome-binding GTPase BG04_1125 PF10502 Signal peptidase, peptidase S26 BG04_1126 PF01245 Ribosomal protein L19 BG04_1127 PF01746 tRNA (Guanine-1)-methyltransferase BG04_1128 PF05239 PRC-barrel domain BG04_1128 PF01782 RimM N-terminal domain BG04_113 PF13460 NAD(P)H-binding BG04_1131 PF00886 Ribosomal protein S16 BG04_1132 PF02978 Signal peptide binding domain BG04_1132 PF02881 SRP54-type protein, helical bundle domain BG04_1132 PF00448 SRP54-type protein, GTPase domain BG04_1133 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BG04_1134 PF00448 SRP54-type protein, GTPase domain BG04_1134 PF02881 SRP54-type protein, helical bundle domain BG04_1135 PF06470 SMC proteins Flexible Hinge Domain BG04_1135 PF02463 RecF/RecN/SMC N terminal domain BG04_1137 PF00550 Phosphopantetheine attachment site BG04_1139 PF00698 Acyl transferase domain BG04_1140 PF02504 Fatty acid synthesis protein BG04_1141 PF08279 HTH domain BG04_1141 PF01575 MaoC like domain BG04_1142 PF00271 Helicase conserved C-terminal domain BG04_1142 PF17191 RecG wedge domain BG04_1142 PF00270 DEAD/DEAH box helicase BG04_1143 PF03313 Serine dehydratase alpha chain BG04_1144 PF01842 ACT domain BG04_1144 PF03315 Serine dehydratase beta chain BG04_1146 PF13684 Dihydroxyacetone kinase family BG04_1146 PF02734 DAK2 domain BG04_1147 PF03780 Asp23 family, cell envelope-related function BG04_1148 PF00830 Ribosomal L28 family BG04_1149 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BG04_1149 PF04263 Thiamin pyrophosphokinase, catalytic domain BG04_1150 PF00834 Ribulose-phosphate 3 epimerase family BG04_1151 PF16745 RsgA N-terminal domain BG04_1151 PF03193 RsgA GTPase BG04_1152 PF03793 PASTA domain BG04_1152 PF00069 Protein kinase domain BG04_1154 PF04055 Radical SAM superfamily BG04_1155 PF01029 NusB family BG04_1155 PF01189 16S rRNA methyltransferase RsmB/F BG04_1156 PF02911 Formyl transferase, C-terminal domain BG04_1156 PF00551 Formyl transferase BG04_1157 PF01327 Polypeptide deformylase BG04_1158 PF00271 Helicase conserved C-terminal domain BG04_1158 PF04851 Type III restriction enzyme, res subunit BG04_1158 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BG04_1158 PF18074 Primosomal protein N C-terminal domain BG04_1158 PF17764 3′ DNA-binding domain (3′BD) BG04_1159 PF02441 Flavoprotein BG04_1159 PF04127 DNA / pantothenate metabolism flavoprotein BG04_1160 PF01192 RNA polymerase Rpb6 BG04_1161 PF00625 Guanylate kinase BG04_1162 PF04025 Domain of unknown function (DUF370) BG04_1165 PF00690 Cation transporter/ATPase, N-terminus BG04_1165 PF00689 Cation transporting ATPase, C-terminus BG04_1167 PF00156 Phosphoribosyl transferase domain BG04_1168 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BG04_1169 PF01180 Dihydroorotate dehydrogenase BG04_1170 PF00175 Oxidoreductase NAD-binding domain BG04_1170 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BG04_1171 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BG04_1171 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BG04_1171 PF02142 MGS-like domain BG04_1172 PF00117 Glutamine amidotransferase class-I BG04_1172 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BG04_1173 PF01979 Amidohydrolase family BG04_1175 PF00860 Permease family BG04_1176 PF00156 Phosphoribosyl transferase domain BG04_1177 PF01479 S4 domain BG04_1177 PF00849 RNA pseudouridylate synthase BG04_1178 PF01252 Signal peptidase (SPase) II BG04_118 PF05067 Manganese containing catalase BG04_1180 PF06827 Zinc finger found in FPG and IleRS BG04_1180 PF00133 tRNA synthetases class I (I, L, M and V) BG04_1180 PF08264 Anticodon-binding domain of tRNA BG04_1181 PF05103 DivIVA protein BG04_1182 PF01479 S4 domain BG04_1182 PF17774 Putative RNA-binding domain in YlmH BG04_1183 PF02325 YGGT family BG04_1184 PF04472 Cell division protein SepF BG04_1185 PF01168 Alanine racemase, N-terminal domain BG04_1187 PF05239 PRC-barrel domain BG04_1188 PF04545 Sigma-70, region 4 BG04_1188 PF04539 Sigma-70 region 3 BG04_1188 PF04542 Sigma-70 region 2 BG04_1189 PF04545 Sigma-70, region 4 BG04_1189 PF04542 Sigma-70 region 2 BG04_119 PF01497 Periplasmic binding protein BG04_1190 PF03419 Sporulation factor SpoIIGA BG04_1191 PF00091 Tubulin/FtsZ family, GTPase domain BG04_1191 PF12327 FtsZ family, C-terminal domain BG04_1192 PF02491 SHS2 domain inserted in FTSA BG04_1193 PF08478 POTRA domain, FtsQ-type BG04_1194 PF01565 FAD binding domain BG04_1194 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BG04_1195 PF01098 Cell cycle protein BG04_1196 PF08245 Mur ligase middle domain BG04_1196 PF02875 Mur ligase family, glutamate ligase domain BG04_1197 PF00953 Glycosyl transferase family 4 BG04_1198 PF01225 Mur ligase family, catalytic domain BG04_1198 PF08245 Mur ligase middle domain BG04_1198 PF02875 Mur ligase family, glutamate ligase domain BG04_1199 PF03717 Penicillin-binding Protein dimerisation domain BG04_1199 PF00905 Penicillin binding protein transpeptidase domain BG04_1199 PF03793 PASTA domain BG04_120 PF00005 ABC transporter BG04_1201 PF04977 Septum formation initiator BG04_1202 PF01795 MraW methylase family BG04_1203 PF10079 Bacillithiol biosynthesis BshC BG04_1205 PF02558 Ketopantoate reductase PanE/ApbA BG04_1205 PF08546 Ketopantoate reductase PanE/ApbA C terminal BG04_1206 PF01039 Carboxyl transferase domain BG04_1207 PF00364 Biotin-requiring enzyme BG04_1208 PF02785 Biotin carboxylase C-terminal domain BG04_1208 PF00289 Biotin carboxylase, N-terminal domain BG04_1208 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BG04_1209 PF13508 Acetyltransferase (GNAT) domain BG04_121 PF01032 FecCD transport family BG04_1211 PF00378 Enoyl-CoA hydratase/isomerase BG04_1212 PF01783 Ribosomal L32p protein family BG04_1213 PF02620 Large ribosomal RNA subunit accumulation protein YceD BG04_1214 PF05636 HIGH Nucleotidyl Transferase BG04_1215 PF05362 Lon protease (S16) C-terminal proteolytic domain BG04_1215 PF13180 PDZ domain BG04_1216 PF01734 Patatin-like phospholipase BG04_1217 PF07670 Nucleoside recognition BG04_1218 PF01467 Cytidylyltransferase-like BG04_122 PF01032 FecCD transport family BG04_1221 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BG04_1223 PF06133 Control of competence regulator ComK, YlbF/YmcA BG04_1225 PF14003 YlbE-like protein BG04_1226 PF14071 Putative coat protein BG04_1227 PF07187 Protein of unknown function (DUF1405) BG04_1228 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BG04_1228 PF00032 Cytochrome b(C-terminal)/b6/petD BG04_1229 PF00033 Cytochrome b/b6/petB BG04_123 PF07486 Cell Wall Hydrolase BG04_1230 PF00355 Rieske [2Fe-2S] domain BG04_1231 PF10673 Protein of unknown function (DUF2487) BG04_1232 PF08858 IDEAL domain BG04_1232 PF08864 UPF0302 domain BG04_1234 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BG04_1235 PF01842 ACT domain BG04_1235 PF02153 Prephenate dehydrogenase BG04_1236 PF00155 Aminotransferase class I and II BG04_1237 PF00290 Tryptophan synthase alpha chain BG04_1238 PF00291 Pyridoxal-phosphate dependent enzyme BG04_1239 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BG04_1240 PF00218 Indole-3-glycerol phosphate synthase BG04_1241 PF00591 Glycosyl transferase family, a/b domain BG04_1241 PF02885 Glycosyl transferase family, helical bundle domain BG04_1242 PF04715 Anthranilate synthase component I, N terminal region BG04_1242 PF00425 chorismate binding enzyme BG04_1243 PF01761 3-dehydroquinate synthase BG04_1244 PF01264 Chorismate synthase BG04_1245 PF01739 CheR methyltransferase, SAM binding domain BG04_1245 PF03705 CheR methyltransferase, all-alpha domain BG04_1246 PF00334 Nucleoside diphosphate kinase BG04_1247 PF00348 Polyprenyl synthetase BG04_1248 PF01209 ubiE/COQ5 methyltransferase family BG04_1249 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BG04_1250 PF02081 Tryptophan RNA-binding attenuator protein BG04_1251 PF01227 GTP cyclohydrolase I BG04_1252 PF00216 Bacterial DNA-binding protein BG04_1253 PF09547 Stage IV sporulation protein A (spore_IV_A) BG04_1255 PF10966 Protein of unknown function (DUF2768) BG04_1256 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BG04_1256 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BG04_1257 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BG04_1257 PF01926 50S ribosome-binding GTPase BG04_1259 PF14140 YpzI-like protein BG04_1261 PF01070 FMN-dependent dehydrogenase BG04_1262 PF00575 S1 RNA binding domain BG04_1263 PF01553 Acyltransferase BG04_1264 PF02224 Cytidylate kinase BG04_1267 PF03413 Peptidase propeptide and YPEB domain BG04_1267 PF14620 YpeB sporulation BG04_1268 PF07486 Cell Wall Hydrolase BG04_1268 PF01471 Putative peptidoglycan binding domain BG04_1269 PF13367 PrsW family intramembrane metalloprotease BG04_127 PF00107 Zinc-binding dehydrogenase BG04_127 PF08240 Alcohol dehydrogenase GroES-like domain BG04_1270 PF17763 Glutaminase/Asparaginase C-terminal domain BG04_1270 PF00710 Asparaginase, N-terminal BG04_1272 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BG04_1272 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BG04_1273 PF05389 Negative regulator of genetic competence (MecA) BG04_1274 PF13411 MerR HTH family regulatory protein BG04_1275 PF00149 Calcineurin-like phosphoesterase BG04_1278 PF02517 CPBP intramembrane metalloprotease BG04_1279 PF00270 DEAD/DEAH box helicase BG04_1279 PF00271 Helicase conserved C-terminal domain BG04_128 PF00107 Zinc-binding dehydrogenase BG04_128 PF08240 Alcohol dehydrogenase GroES-like domain BG04_1282 PF12822 ECF transporter, substrate-specific component BG04_1283 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BG04_1283 PF01842 ACT domain BG04_1283 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BG04_1284 PF01551 Peptidase family M23 BG04_1285 PF00672 HAMP domain BG04_1285 PF00989 PAS fold BG04_1285 PF18698 Histidine kinase sensor domain BG04_1285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_1285 PF00512 His Kinase A (phospho-acceptor) domain BG04_1286 PF00486 Transcriptional regulatory protein, C terminal BG04_1286 PF00072 Response regulator receiver domain BG04_1287 PF01578 Cytochrome C assembly protein BG04_1288 PF05140 ResB-like family BG04_1289 PF00578 AhpC/TSA family BG04_129 PF03611 PTS system sugar-specific permease component BG04_1290 PF01479 S4 domain BG04_1290 PF00849 RNA pseudouridylate synthase BG04_1291 PF07670 Nucleoside recognition BG04_1292 PF07670 Nucleoside recognition BG04_1293 PF00768 D-alanyl-D-alanine carboxypeptidase BG04_1293 PF07943 Penicillin-binding protein 5, C-terminal domain BG04_1294 PF04079 Segregation and condensation complex subunit ScpB BG04_1295 PF02616 Segregation and condensation protein ScpA BG04_1296 PF03745 Domain of unknown function (DUF309) BG04_1297 PF00583 Acetyltransferase (GNAT) family BG04_1298 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BG04_1299 PF06207 Protein of unknown function (DUF1002) BG04_130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BG04_1300 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BG04_1300 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BG04_1301 PF03323 Bacillus/Clostridium GerA spore germination protein BG04_1302 PF14097 Stage V sporulation protein AE1 BG04_1303 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BG04_1304 PF07451 Stage V sporulation protein AD (SpoVAD) BG04_1305 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BG04_1306 PF13782 Stage V sporulation protein AB BG04_1307 PF12164 Stage V sporulation protein AA BG04_1308 PF04539 Sigma-70 region 3 BG04_1308 PF04545 Sigma-70, region 4 BG04_1308 PF04542 Sigma-70 region 2 BG04_1309 PF13581 Histidine kinase-like ATPase domain BG04_131 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BG04_1310 PF01740 STAS domain BG04_1311 PF07943 Penicillin-binding protein 5, C-terminal domain BG04_1311 PF00768 D-alanyl-D-alanine carboxypeptidase BG04_1312 PF01048 Phosphorylase superfamily BG04_1313 PF01676 Metalloenzyme superfamily BG04_1314 PF02899 Phage integrase, N-terminal SAM-like domain BG04_1314 PF00589 Phage integrase family BG04_1315 PF14004 Protein of unknown function (DUF4227) BG04_1316 PF01475 Ferric uptake regulator family BG04_1317 PF01944 Stage II sporulation protein M BG04_1318 PF00293 NUDIX domain BG04_1319 PF13072 Mother cell inhibitor of FtsZ BG04_1320 PF00248 Aldo/keto reductase family BG04_1322 PF01144 Coenzyme A transferase BG04_1323 PF01144 Coenzyme A transferase BG04_1324 PF02803 Thiolase, C-terminal domain BG04_1324 PF00108 Thiolase, N-terminal domain BG04_1325 PF00682 HMGL-like BG04_1327 PF12146 Serine aminopeptidase, S33 BG04_1329 PF00106 short chain dehydrogenase BG04_1330 PF00753 Metallo-beta-lactamase superfamily BG04_1331 PF14748 Pyrroline-5-carboxylate reductase dimerisation BG04_1331 PF03807 NADP oxidoreductase coenzyme F420-dependent BG04_1332 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BG04_1333 PF00753 Metallo-beta-lactamase superfamily BG04_1333 PF12706 Beta-lactamase superfamily domain BG04_1334 PF00202 Aminotransferase class-III BG04_1335 PF00171 Aldehyde dehydrogenase family BG04_1336 PF13556 PucR C-terminal helix-turn-helix domain BG04_1336 PF07905 Purine catabolism regulatory protein-like family BG04_1336 PF17853 GGDEF-like domain BG04_1339 PF01979 Amidohydrolase family BG04_134 PF02525 Flavodoxin-like fold BG04_1340 PF01180 Dihydroorotate dehydrogenase BG04_1341 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG04_1341 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BG04_1342 PF01546 Peptidase family M20/M25/M40 BG04_1342 PF07687 Peptidase dimerisation domain BG04_1343 PF01039 Carboxyl transferase domain BG04_1346 PF03734 L,D-transpeptidase catalytic domain BG04_1347 PF11728 Putative aromatic acid exporter C-terminal domain BG04_1347 PF06081 Aromatic acid exporter family member 1 BG04_1348 PF00005 ABC transporter BG04_1349 PF00528 Binding-protein-dependent transport system inner membrane component BG04_135 PF10502 Signal peptidase, peptidase S26 BG04_1350 PF00497 Bacterial extracellular solute-binding proteins, family 3 BG04_1351 PF06491 Disulphide isomerase BG04_1353 PF01642 Methylmalonyl-CoA mutase BG04_1353 PF02310 B12 binding domain BG04_1355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BG04_1355 PF00364 Biotin-requiring enzyme BG04_1355 PF02817 e3 binding domain BG04_1356 PF02780 Transketolase, C-terminal domain BG04_1356 PF02779 Transketolase, pyrimidine binding domain BG04_1357 PF00676 Dehydrogenase E1 component BG04_1358 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG04_1358 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BG04_1359 PF00871 Acetokinase family BG04_1360 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BG04_1360 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BG04_1361 PF01515 Phosphate acetyl/butaryl transferase BG04_1362 PF02954 Bacterial regulatory protein, Fis family BG04_1362 PF00989 PAS fold BG04_1362 PF00158 Sigma-54 interaction domain BG04_1363 PF11118 Protein of unknown function (DUF2627) BG04_1364 PF03009 Glycerophosphoryl diester phosphodiesterase family BG04_1365 PF14174 YycC-like protein BG04_1366 PF00854 POT family BG04_1367 PF08769 Sporulation initiation factor Spo0A C terminal BG04_1367 PF00072 Response regulator receiver domain BG04_1368 PF05580 SpoIVB peptidase S55 BG04_1368 PF17820 PDZ domain BG04_1369 PF13476 AAA domain BG04_1370 PF01316 Arginine repressor, DNA binding domain BG04_1370 PF02863 Arginine repressor, C-terminal domain BG04_1371 PF01479 S4 domain BG04_1371 PF01728 FtsJ-like methyltransferase BG04_1372 PF02779 Transketolase, pyrimidine binding domain BG04_1372 PF02780 Transketolase, C-terminal domain BG04_1372 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BG04_1373 PF00348 Polyprenyl synthetase BG04_1374 PF02609 Exonuclease VII small subunit BG04_1375 PF02601 Exonuclease VII, large subunit BG04_1375 PF13742 OB-fold nucleic acid binding domain BG04_1376 PF01029 NusB family BG04_1377 PF03780 Asp23 family, cell envelope-related function BG04_1378 PF02785 Biotin carboxylase C-terminal domain BG04_1378 PF00289 Biotin carboxylase, N-terminal domain BG04_1378 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BG04_1379 PF00364 Biotin-requiring enzyme BG04_1380 PF12685 SpoIIIAH-like protein BG04_1382 PF09581 Stage III sporulation protein AF (Spore_III_AF) BG04_1383 PF09546 Stage III sporulation protein AE (spore_III_AE) BG04_1384 PF06686 Stage III sporulation protein AC/AD protein family BG04_1385 PF06686 Stage III sporulation protein AC/AD protein family BG04_1386 PF09548 Stage III sporulation protein AB (spore_III_AB) BG04_1388 PF10942 Protein of unknown function (DUF2619) BG04_1389 PF09285 Elongation factor P, C-terminal BG04_1389 PF08207 Elongation factor P (EF-P) KOW-like domain BG04_1389 PF01132 Elongation factor P (EF-P) OB domain BG04_139 PF01713 Smr domain BG04_139 PF00488 MutS domain V BG04_1390 PF01321 Creatinase/Prolidase N-terminal domain BG04_1390 PF00557 Metallopeptidase family M24 BG04_1391 PF01220 Dehydroquinase class II BG04_1392 PF11085 Conserved membrane protein YqhR BG04_1393 PF07136 Protein of unknown function (DUF1385) BG04_1395 PF01734 Patatin-like phospholipase BG04_1396 PF02742 Iron dependent repressor, metal binding and dimerisation domain BG04_1396 PF01325 Iron dependent repressor, N-terminal DNA binding domain BG04_1397 PF00317 Ribonucleotide reductase, all-alpha domain BG04_1397 PF02867 Ribonucleotide reductase, barrel domain BG04_1397 PF03477 ATP cone domain BG04_1399 PF03099 Biotin/lipoate A/B protein ligase family BG04_1400 PF00581 Rhodanese-like domain BG04_1401 PF02347 Glycine cleavage system P-protein BG04_1402 PF02347 Glycine cleavage system P-protein BG04_1403 PF08669 Glycine cleavage T-protein C-terminal barrel domain BG04_1403 PF01571 Aminomethyltransferase folate-binding domain BG04_1404 PF00271 Helicase conserved C-terminal domain BG04_1404 PF00176 SNF2 family N-terminal domain BG04_1405 PF11079 Bacterial protein YqhG of unknown function BG04_1406 PF14038 YqzE-like protein BG04_141 PF03591 AzlC protein BG04_1410 PF07963 Prokaryotic N-terminal methylation motif BG04_1411 PF07963 Prokaryotic N-terminal methylation motif BG04_1412 PF00482 Type II secretion system (T2SS), protein F BG04_1413 PF00437 Type II/IV secretion system protein BG04_142 PF01381 Helix-turn-helix BG04_142 PF07883 Cupin domain BG04_1424 PF10779 Haemolysin XhlA BG04_143 PF03741 Integral membrane protein TerC family BG04_1435 PF01464 Transglycosylase SLT domain BG04_1435 PF01551 Peptidase family M23 BG04_1435 PF10145 Phage-related minor tail protein BG04_1449 PF04233 Phage Mu protein F like protein BG04_145 PF00356 Bacterial regulatory proteins, lacI family BG04_145 PF13407 Periplasmic binding protein domain BG04_1452 PF03592 Terminase small subunit BG04_1452 PF10668 Phage terminase small subunit BG04_146 PF02082 Transcriptional regulator BG04_1463 PF09669 Phage regulatory protein Rha (Phage_pRha) BG04_1463 PF03374 Phage antirepressor protein KilAC domain BG04_1468 PF01695 IstB-like ATP binding protein BG04_1469 PF07261 Replication initiation and membrane attachment BG04_1472 PF09466 Hypothetical protein Yqai BG04_1482 PF01381 Helix-turn-helix BG04_1483 PF06114 IrrE N-terminal-like domain BG04_1486 PF00437 Type II/IV secretion system protein BG04_1487 PF02796 Helix-turn-helix domain of resolvase BG04_1487 PF00239 Resolvase, N terminal domain BG04_1488 PF03960 ArsC family BG04_1489 PF11117 Protein of unknown function (DUF2626) BG04_1490 PF00753 Metallo-beta-lactamase superfamily BG04_1492 PF00246 Zinc carboxypeptidase BG04_1492 PF01476 LysM domain BG04_1493 PF00480 ROK family BG04_1494 PF06014 Bacterial protein of unknown function (DUF910) BG04_1495 PF01694 Rhomboid family BG04_1498 PF01812 5-formyltetrahydrofolate cyclo-ligase family BG04_1499 PF00471 Ribosomal protein L33 BG04_150 PF00741 Gas vesicle protein BG04_1500 PF00483 Nucleotidyl transferase BG04_1501 PF13439 Glycosyltransferase Family 4 BG04_1501 PF00534 Glycosyl transferases group 1 BG04_1503 PF01895 PhoU domain BG04_1504 PF00005 ABC transporter BG04_1506 PF07690 Major Facilitator Superfamily BG04_1507 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BG04_1507 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BG04_1513 PF04306 Protein of unknown function (DUF456) BG04_1516 PF07690 Major Facilitator Superfamily BG04_1518 PF04551 GcpE protein BG04_1521 PF01475 Ferric uptake regulator family BG04_1522 PF00950 ABC 3 transport family BG04_1523 PF00005 ABC transporter BG04_1525 PF01261 Xylose isomerase-like TIM barrel BG04_1526 PF00270 DEAD/DEAH box helicase BG04_1526 PF00271 Helicase conserved C-terminal domain BG04_1528 PF02401 LytB protein BG04_1529 PF01784 NIF3 (NGG1p interacting factor 3) BG04_1530 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BG04_1531 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BG04_1532 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BG04_1532 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BG04_1532 PF02770 Acyl-CoA dehydrogenase, middle domain BG04_1533 PF04545 Sigma-70, region 4 BG04_1533 PF03979 Sigma-70 factor, region 1.1 BG04_1533 PF00140 Sigma-70 factor, region 1.2 BG04_1533 PF04539 Sigma-70 region 3 BG04_1533 PF04542 Sigma-70 region 2 BG04_1534 PF08275 DNA primase catalytic core, N-terminal domain BG04_1534 PF01807 CHC2 zinc finger BG04_1534 PF10410 DnaB-helicase binding domain of primase BG04_1535 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BG04_1536 PF03618 Kinase/pyrophosphorylase BG04_1537 PF00571 CBS domain BG04_1537 PF08279 HTH domain BG04_1538 PF11967 Recombination protein O N terminal BG04_1538 PF02565 Recombination protein O C terminal BG04_1539 PF14006 YqzL-like protein BG04_1540 PF01926 50S ribosome-binding GTPase BG04_1540 PF07650 KH domain BG04_1541 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BG04_1542 PF01219 Prokaryotic diacylglycerol kinase BG04_1543 PF02130 Uncharacterized protein family UPF0054 BG04_1544 PF01966 HD domain BG04_1544 PF07697 7TM-HD extracellular BG04_1544 PF07698 7TM receptor with intracellular HD hydrolase BG04_1545 PF02562 PhoH-like protein BG04_1546 PF06898 Putative stage IV sporulation protein YqfD BG04_1547 PF07873 YabP family BG04_1549 PF12127 SigmaW regulon antibacterial BG04_155 PF00741 Gas vesicle protein BG04_1550 PF01957 NfeD-like C-terminal, partner-binding BG04_1550 PF01972 Serine dehydrogenase proteinase BG04_1551 PF09424 Yqey-like protein BG04_1552 PF01165 Ribosomal protein S21 BG04_1553 PF01938 TRAM domain BG04_1553 PF00919 Uncharacterized protein family UPF0004 BG04_1553 PF04055 Radical SAM superfamily BG04_1554 PF04452 RNA methyltransferase BG04_1556 PF00684 DnaJ central domain BG04_1556 PF01556 DnaJ C terminal domain BG04_1556 PF00226 DnaJ domain BG04_1557 PF00012 Hsp70 protein BG04_1558 PF01025 GrpE BG04_1559 PF01628 HrcA protein C terminal domain BG04_156 PF05121 Gas vesicle protein K BG04_156 PF00741 Gas vesicle protein BG04_1560 PF06969 HemN C-terminal domain BG04_1560 PF04055 Radical SAM superfamily BG04_1561 PF06421 GTP-binding protein LepA C-terminus BG04_1561 PF03144 Elongation factor Tu domain 2 BG04_1561 PF00009 Elongation factor Tu GTP binding domain BG04_1561 PF00679 Elongation factor G C-terminus BG04_1563 PF03418 Germination protease BG04_1564 PF01649 Ribosomal protein S20 BG04_1565 PF06144 DNA polymerase III, delta subunit BG04_1566 PF14141 YqzM-like protein BG04_1567 PF03772 Competence protein BG04_1567 PF13567 Domain of unknown function (DUF4131) BG04_1567 PF00753 Metallo-beta-lactamase superfamily BG04_1568 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BG04_1569 PF10531 SLBB domain BG04_157 PF00741 Gas vesicle protein BG04_1570 PF14748 Pyrroline-5-carboxylate reductase dimerisation BG04_1570 PF03807 NADP oxidoreductase coenzyme F420-dependent BG04_1571 PF13649 Methyltransferase domain BG04_1573 PF01966 HD domain BG04_1574 PF01467 Cytidylyltransferase-like BG04_1575 PF01985 CRS1 / YhbY (CRM) domain BG04_1576 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BG04_1576 PF01488 Shikimate / quinate 5-dehydrogenase BG04_1576 PF08501 Shikimate dehydrogenase substrate binding domain BG04_1577 PF01926 50S ribosome-binding GTPase BG04_1579 PF08970 Sporulation inhibitor A BG04_1580 PF02666 Phosphatidylserine decarboxylase BG04_1581 PF01066 CDP-alcohol phosphatidyltransferase BG04_1583 PF04542 Sigma-70 region 2 BG04_1583 PF04545 Sigma-70, region 4 BG04_1584 PF09501 Probable sporulation protein (Bac_small_yrzI) BG04_1586 PF01053 Cys/Met metabolism PLP-dependent enzyme BG04_1587 PF00291 Pyridoxal-phosphate dependent enzyme BG04_1588 PF01048 Phosphorylase superfamily BG04_1589 PF13649 Methyltransferase domain BG04_1590 PF10750 Protein of unknown function (DUF2536) BG04_1592 PF03717 Penicillin-binding Protein dimerisation domain BG04_1592 PF00905 Penicillin binding protein transpeptidase domain BG04_1593 PF00857 Isochorismatase family BG04_1594 PF03449 Transcription elongation factor, N-terminal BG04_1594 PF01272 Transcription elongation factor, GreA/GreB, C-term BG04_1595 PF00485 Phosphoribulokinase / Uridine kinase family BG04_1599 PF02618 YceG-like family BG04_160 PF07486 Cell Wall Hydrolase BG04_1600 PF06949 Protein of unknown function (DUF1292) BG04_1601 PF03652 Holliday junction resolvase BG04_1602 PF06135 IreB regulatory phosphoprotein BG04_1603 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BG04_1603 PF01411 tRNA synthetases class II (A) BG04_1603 PF02272 DHHA1 domain BG04_1604 PF01594 AI-2E family transporter BG04_1607 PF14490 Helix-hairpin-helix containing domain BG04_1607 PF13538 UvrD-like helicase C-terminal domain BG04_1607 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BG04_161 PF01872 RibD C-terminal domain BG04_1610 PF00266 Aminotransferase class-V BG04_1611 PF02082 Transcriptional regulator BG04_1612 PF16193 AAA C-terminal domain BG04_1612 PF12002 MgsA AAA+ ATPase C terminal BG04_1612 PF05496 Holliday junction DNA helicase RuvB P-loop domain BG04_1613 PF00528 Binding-protein-dependent transport system inner membrane component BG04_1614 PF00528 Binding-protein-dependent transport system inner membrane component BG04_1615 PF12849 PBP superfamily domain BG04_1616 PF00899 ThiF family BG04_1618 PF02938 GAD domain BG04_1618 PF00152 tRNA synthetases class II (D, K and N) BG04_1618 PF01336 OB-fold nucleic acid binding domain BG04_1619 PF03129 Anticodon binding domain BG04_1619 PF13393 Histidyl-tRNA synthetase BG04_1621 PF02580 D-Tyr-tRNA(Tyr) deacylase BG04_1622 PF01520 N-acetylmuramoyl-L-alanine amidase BG04_1622 PF08239 Bacterial SH3 domain BG04_1623 PF02824 TGS domain BG04_1623 PF13291 ACT domain BG04_1623 PF04607 Region found in RelA / SpoT proteins BG04_1624 PF00156 Phosphoribosyl transferase domain BG04_1625 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BG04_1625 PF02272 DHHA1 domain BG04_1625 PF17768 RecJ OB domain BG04_1625 PF01368 DHH family BG04_1626 PF02355 Protein export membrane protein BG04_1626 PF07549 SecD/SecF GG Motif BG04_1627 PF13797 Post-transcriptional regulator BG04_1628 PF01943 Polysaccharide biosynthesis protein BG04_1628 PF14667 Polysaccharide biosynthesis C-terminal domain BG04_1629 PF04239 Protein of unknown function (DUF421) BG04_163 PF00067 Cytochrome P450 BG04_163 PF00258 Flavodoxin BG04_163 PF00667 FAD binding domain BG04_163 PF00175 Oxidoreductase NAD-binding domain BG04_1630 PF12670 Protein of unknown function (DUF3792) BG04_1631 PF02699 Preprotein translocase subunit BG04_1633 PF02547 Queuosine biosynthesis protein BG04_1634 PF11146 Protein of unknown function (DUF2905) BG04_1635 PF17864 RuvB AAA lid domain BG04_1635 PF05491 RuvB C-terminal winged helix domain BG04_1635 PF05496 Holliday junction DNA helicase RuvB P-loop domain BG04_1637 PF08955 BofC C-terminal domain BG04_1637 PF08977 Bypass of Forespore C, N terminal BG04_164 PF16295 Tetracyclin repressor-like, C-terminal domain BG04_164 PF00440 Bacterial regulatory proteins, tetR family BG04_1641 PF01476 LysM domain BG04_1642 PF02445 Quinolinate synthetase A protein BG04_1643 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BG04_1643 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BG04_1644 PF00890 FAD binding domain BG04_1644 PF02910 Fumarate reductase flavoprotein C-term BG04_1645 PF00266 Aminotransferase class-V BG04_1646 PF08279 HTH domain BG04_1646 PF02829 3H domain BG04_1647 PF00800 Prephenate dehydratase BG04_1647 PF01842 ACT domain BG04_1648 PF01842 ACT domain BG04_1649 PF01018 GTP1/OBG BG04_1649 PF01926 50S ribosome-binding GTPase BG04_1649 PF09269 Domain of unknown function (DUF1967) BG04_1650 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BG04_1650 PF14682 Sporulation initiation phospho-transferase B, C-terminal BG04_1651 PF01016 Ribosomal L27 protein BG04_1652 PF04327 Cysteine protease Prp BG04_1653 PF00829 Ribosomal prokaryotic L21 protein BG04_1654 PF10150 Ribonuclease E/G family BG04_1654 PF00575 S1 RNA binding domain BG04_1655 PF02163 Peptidase family M50 BG04_1656 PF01551 Peptidase family M23 BG04_1657 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BG04_1658 PF03775 Septum formation inhibitor MinC, C-terminal domain BG04_1659 PF04093 rod shape-determining protein MreD BG04_166 PF05067 Manganese containing catalase BG04_1660 PF04085 rod shape-determining protein MreC BG04_1662 PF04002 RadC-like JAB domain BG04_1663 PF02545 Maf-like protein BG04_1665 PF06750 Bacterial Peptidase A24 N-terminal domain BG04_1665 PF01478 Type IV leader peptidase family BG04_1667 PF04238 Protein of unknown function (DUF420) BG04_1668 PF02875 Mur ligase family, glutamate ligase domain BG04_1668 PF08245 Mur ligase middle domain BG04_1669 PF00133 tRNA synthetases class I (I, L, M and V) BG04_1669 PF10458 Valyl tRNA synthetase tRNA binding arm BG04_1669 PF08264 Anticodon-binding domain of tRNA BG04_167 PF12652 CotJB protein BG04_1671 PF01476 LysM domain BG04_1672 PF00202 Aminotransferase class-III BG04_1673 PF00490 Delta-aminolevulinic acid dehydratase BG04_1674 PF02602 Uroporphyrinogen-III synthase HemD BG04_1675 PF03900 Porphobilinogen deaminase, C-terminal domain BG04_1675 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BG04_1676 PF01578 Cytochrome C assembly protein BG04_1677 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BG04_1677 PF01488 Shikimate / quinate 5-dehydrogenase BG04_1677 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BG04_1679 PF01926 50S ribosome-binding GTPase BG04_168 PF11007 Spore coat associated protein JA (CotJA) BG04_1680 PF02190 ATP-dependent protease La (LON) substrate-binding domain BG04_1680 PF00004 ATPase family associated with various cellular activities (AAA) BG04_1680 PF05362 Lon protease (S16) C-terminal proteolytic domain BG04_1681 PF00004 ATPase family associated with various cellular activities (AAA) BG04_1681 PF05362 Lon protease (S16) C-terminal proteolytic domain BG04_1682 PF10431 C-terminal, D2-small domain, of ClpB protein BG04_1682 PF06689 ClpX C4-type zinc finger BG04_1682 PF07724 AAA domain (Cdc48 subfamily) BG04_1683 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BG04_1683 PF05698 Bacterial trigger factor protein (TF) C-terminus BG04_1683 PF05697 Bacterial trigger factor protein (TF) BG04_1685 PF00694 Aconitase C-terminal domain BG04_1686 PF00330 Aconitase family (aconitate hydratase) BG04_1687 PF00180 Isocitrate/isopropylmalate dehydrogenase BG04_1688 PF08502 LeuA allosteric (dimerisation) domain BG04_1688 PF00682 HMGL-like BG04_1689 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BG04_1689 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BG04_1690 PF01842 ACT domain BG04_1690 PF10369 Small subunit of acetolactate synthase BG04_1691 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BG04_1691 PF00205 Thiamine pyrophosphate enzyme, central domain BG04_1691 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BG04_1693 PF12850 Calcineurin-like phosphoesterase superfamily domain BG04_1694 PF01725 Ham1 family BG04_1695 PF01138 3' exoribonuclease family, domain 1 BG04_1695 PF03725 3' exoribonuclease family, domain 2 BG04_1696 PF10646 Sporulation and spore germination BG04_1697 PF01177 Asp/Glu/Hydantoin racemase BG04_1698 PF01047 MarR family BG04_1699 PF08000 Bacterial PH domain BG04_1699 PF11724 YvbH-like oligomerisation region BG04_170 PF01810 LysE type translocator BG04_1700 PF01384 Phosphate transporter family BG04_1701 PF01865 Protein of unknown function DUF47 BG04_1702 PF03717 Penicillin-binding Protein dimerisation domain BG04_1702 PF05223 NTF2-like N-terminal transpeptidase domain BG04_1702 PF00905 Penicillin binding protein transpeptidase domain BG04_1704 PF00296 Luciferase-like monooxygenase BG04_1705 PF03358 NADPH-dependent FMN reductase BG04_1706 PF00528 Binding-protein-dependent transport system inner membrane component BG04_1707 PF09084 NMT1/THI5 like BG04_1708 PF00005 ABC transporter BG04_1709 PF00999 Sodium/hydrogen exchanger family BG04_171 PF12833 Helix-turn-helix domain BG04_171 PF02311 AraC-like ligand binding domain BG04_1710 PF02080 TrkA-C domain BG04_1712 PF00196 Bacterial regulatory proteins, luxR family BG04_1713 PF03061 Thioesterase superfamily BG04_1714 PF13085 2Fe-2S iron-sulfur cluster binding domain BG04_1714 PF13183 4Fe-4S dicluster domain BG04_1715 PF00890 FAD binding domain BG04_1715 PF02910 Fumarate reductase flavoprotein C-term BG04_1716 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BG04_1717 PF10702 Protein of unknown function (DUF2507) BG04_1718 PF01842 ACT domain BG04_1718 PF13840 ACT domain BG04_1718 PF00696 Amino acid kinase family BG04_1719 PF02151 UvrB/uvrC motif BG04_1719 PF08459 UvrC Helix-hairpin-helix N-terminal BG04_1719 PF01541 GIY-YIG catalytic domain BG04_172 PF13185 GAF domain BG04_172 PF07730 Histidine kinase BG04_1720 PF00085 Thioredoxin BG04_1721 PF00766 Electron transfer flavoprotein FAD-binding domain BG04_1721 PF01012 Electron transfer flavoprotein domain BG04_1722 PF01012 Electron transfer flavoprotein domain BG04_1723 PF00378 Enoyl-CoA hydratase/isomerase BG04_1724 PF08359 YsiA-like protein, C-terminal region BG04_1724 PF00440 Bacterial regulatory proteins, tetR family BG04_1725 PF13193 AMP-binding enzyme C-terminal domain BG04_1725 PF00501 AMP-binding enzyme BG04_1726 PF01717 Cobalamin-independent synthase, Catalytic domain BG04_1727 PF03994 Domain of Unknown Function (DUF350) BG04_1728 PF00488 MutS domain V BG04_1728 PF01713 Smr domain BG04_1729 PF02811 PHP domain BG04_1729 PF14716 Helix-hairpin-helix domain BG04_1729 PF14791 DNA polymerase beta thumb BG04_173 PF00072 Response regulator receiver domain BG04_173 PF00196 Bacterial regulatory proteins, luxR family BG04_1730 PF02674 Colicin V production protein BG04_1731 PF05164 Cell division protein ZapA BG04_1732 PF01351 Ribonuclease HII BG04_1732 PF11858 Domain of unknown function (DUF3378) BG04_1733 PF03483 B3/4 domain BG04_1733 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BG04_1733 PF03147 Ferredoxin-fold anticodon binding domain BG04_1733 PF03484 tRNA synthetase B5 domain BG04_1733 PF01588 Putative tRNA binding domain BG04_1734 PF01409 tRNA synthetases class II core domain (F) BG04_1734 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BG04_1735 PF08032 RNA 2'-O ribose methyltransferase substrate binding BG04_1735 PF00588 SpoU rRNA Methylase family BG04_1736 PF14098 Small, acid-soluble spore protein I BG04_1737 PF05343 M42 glutamyl aminopeptidase BG04_174 PF03009 Glycerophosphoryl diester phosphodiesterase family BG04_1741 PF00453 Ribosomal protein L20 BG04_1742 PF01632 Ribosomal protein L35 BG04_1743 PF00707 Translation initiation factor IF-3, C-terminal domain BG04_1743 PF05198 Translation initiation factor IF-3, N-terminal domain BG04_1744 PF03129 Anticodon binding domain BG04_1744 PF02824 TGS domain BG04_1744 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BG04_1744 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BG04_1745 PF08812 YtxC-like family BG04_1746 PF07319 Primosomal protein DnaI N-terminus BG04_1746 PF01695 IstB-like ATP binding protein BG04_1747 PF07261 Replication initiation and membrane attachment BG04_1748 PF03477 ATP cone domain BG04_1750 PF02675 S-adenosylmethionine decarboxylase BG04_1751 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BG04_1751 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BG04_1752 PF01121 Dephospho-CoA kinase BG04_1753 PF02659 Putative manganese efflux pump BG04_1754 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BG04_1754 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BG04_1754 PF06827 Zinc finger found in FPG and IleRS BG04_1755 PF01367 5'-3' exonuclease, C-terminal SAM fold BG04_1755 PF00476 DNA polymerase family A BG04_1755 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BG04_1756 PF00512 His Kinase A (phospho-acceptor) domain BG04_1756 PF00989 PAS fold BG04_1756 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_1756 PF16736 Single Cache-like BG04_1757 PF00072 Response regulator receiver domain BG04_1757 PF00486 Transcriptional regulatory protein, C terminal BG04_1759 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BG04_1759 PF00056 lactate/malate dehydrogenase, NAD binding domain BG04_1760 PF00180 Isocitrate/isopropylmalate dehydrogenase BG04_1761 PF00285 Citrate synthase, C-terminal domain BG04_1762 PF04284 Protein of unknown function (DUF441) BG04_1763 PF01594 AI-2E family transporter BG04_1764 PF04186 FxsA cytoplasmic membrane protein BG04_1765 PF02887 Pyruvate kinase, alpha/beta domain BG04_1765 PF00224 Pyruvate kinase, barrel domain BG04_1765 PF00391 PEP-utilising enzyme, mobile domain BG04_1766 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BG04_1767 PF17848 Acetyl-coA carboxylase zinc finger domain BG04_1767 PF01039 Carboxyl transferase domain BG04_1768 PF00392 Bacterial regulatory proteins, gntR family BG04_1768 PF07729 FCD domain BG04_1769 PF03949 Malic enzyme, NAD binding domain BG04_1769 PF00390 Malic enzyme, N-terminal domain BG04_1770 PF14579 Helix-hairpin-helix motif BG04_1770 PF07733 Bacterial DNA polymerase III alpha NTPase domain BG04_1770 PF01336 OB-fold nucleic acid binding domain BG04_1770 PF02811 PHP domain BG04_1770 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BG04_1771 PF14034 Sporulation protein YtrH BG04_1773 PF01368 DHH family BG04_1773 PF02272 DHHA1 domain BG04_1774 PF14007 YtpI-like protein BG04_1775 PF00571 CBS domain BG04_1775 PF00392 Bacterial regulatory proteins, gntR family BG04_1775 PF07085 DRTGG domain BG04_1775 PF03061 Thioesterase superfamily BG04_1778 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BG04_1778 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BG04_178 PF00923 Transaldolase/Fructose-6-phosphate aldolase BG04_1780 PF00206 Lyase BG04_1780 PF14698 Argininosuccinate lyase C-terminal BG04_1781 PF00764 Arginosuccinate synthase BG04_1784 PF00871 Acetokinase family BG04_1785 PF02384 N-6 DNA Methylase BG04_1786 PF08534 Redoxin BG04_1787 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BG04_1788 PF11167 Protein of unknown function (DUF2953) BG04_1789 PF06271 RDD family BG04_179 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BG04_179 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BG04_1790 PF01343 Peptidase family S49 BG04_1791 PF01513 ATP-NAD kinase BG04_1792 PF07969 Amidohydrolase family BG04_1793 PF00269 Small, acid-soluble spore proteins, alpha/beta type BG04_1794 PF02926 THUMP domain BG04_1794 PF02568 Thiamine biosynthesis protein (ThiI) BG04_1795 PF00266 Aminotransferase class-V BG04_1796 PF06160 Septation ring formation regulator, EzrA BG04_1797 PF00440 Bacterial regulatory proteins, tetR family BG04_1798 PF02811 PHP domain BG04_1799 PF13185 GAF domain BG04_180 PF00456 Transketolase, thiamine diphosphate binding domain BG04_180 PF02779 Transketolase, pyrimidine binding domain BG04_180 PF02780 Transketolase, C-terminal domain BG04_1800 PF00163 Ribosomal protein S4/S9 N-terminal domain BG04_1800 PF01479 S4 domain BG04_1801 PF00579 tRNA synthetases class I (W and Y) BG04_1801 PF01479 S4 domain BG04_1802 PF00501 AMP-binding enzyme BG04_1802 PF13193 AMP-binding enzyme C-terminal domain BG04_1803 PF00583 Acetyltransferase (GNAT) family BG04_1804 PF00571 CBS domain BG04_1805 PF00850 Histone deacetylase domain BG04_1806 PF00691 OmpA family BG04_1806 PF13677 Membrane MotB of proton-channel complex MotA/MotB BG04_1807 PF01618 MotA/TolQ/ExbB proton channel family BG04_1808 PF00356 Bacterial regulatory proteins, lacI family BG04_1809 PF00793 DAHP synthetase I family BG04_1809 PF01817 Chorismate mutase type II BG04_181 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BG04_181 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BG04_1810 PF11009 Protein of unknown function (DUF2847) BG04_1811 PF12732 YtxH-like protein BG04_1813 PF02073 Thermophilic metalloprotease (M29) BG04_1814 PF08245 Mur ligase middle domain BG04_1814 PF01225 Mur ligase family, catalytic domain BG04_1814 PF02875 Mur ligase family, glutamate ligase domain BG04_1816 PF17854 FtsK alpha domain BG04_1816 PF09397 Ftsk gamma domain BG04_1816 PF01580 FtsK/SpoIIIE family BG04_1817 PF01588 Putative tRNA binding domain BG04_1817 PF14794 Domain of unknown function (DUF4479) BG04_1818 PF07285 Protein of unknown function (DUF1444) BG04_1819 PF00085 Thioredoxin BG04_1820 PF01931 Protein of unknown function DUF84 BG04_1821 PF05343 M42 glutamyl aminopeptidase BG04_1822 PF00753 Metallo-beta-lactamase superfamily BG04_1823 PF03413 Peptidase propeptide and YPEB domain BG04_1824 PF02390 Putative methyltransferase BG04_1825 PF14165 YtzH-like protein BG04_1826 PF01636 Phosphotransferase enzyme family BG04_1827 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BG04_1827 PF00128 Alpha amylase, catalytic domain BG04_1827 PF17999 Pullulanase N1-terminal domain BG04_1830 PF00291 Pyridoxal-phosphate dependent enzyme BG04_1831 PF01546 Peptidase family M20/M25/M40 BG04_1832 PF08220 DeoR-like helix-turn-helix domain BG04_1833 PF00849 RNA pseudouridylate synthase BG04_1833 PF01479 S4 domain BG04_1834 PF14667 Polysaccharide biosynthesis C-terminal domain BG04_1834 PF01943 Polysaccharide biosynthesis protein BG04_1836 PF10957 Sporulation protein Cse60 BG04_1837 PF00581 Rhodanese-like domain BG04_1838 PF00133 tRNA synthetases class I (I, L, M and V) BG04_1838 PF13603 Leucyl-tRNA synthetase, Domain 2 BG04_1838 PF09334 tRNA synthetases class I (M) BG04_1838 PF08264 Anticodon-binding domain of tRNA BG04_184 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG04_1841 PF07690 Major Facilitator Superfamily BG04_1843 PF10732 Protein of unknown function (DUF2524) BG04_1844 PF16199 Radical_SAM C-terminal domain BG04_1844 PF04055 Radical SAM superfamily BG04_1845 PF06962 Putative rRNA methylase BG04_1846 PF10776 Protein of unknown function (DUF2600) BG04_1847 PF12146 Serine aminopeptidase, S33 BG04_1849 PF00132 Bacterial transferase hexapeptide (six repeats) BG04_1850 PF01569 PAP2 superfamily BG04_1851 PF00534 Glycosyl transferases group 1 BG04_1851 PF13439 Glycosyltransferase Family 4 BG04_1852 PF02772 S-adenosylmethionine synthetase, central domain BG04_1852 PF02773 S-adenosylmethionine synthetase, C-terminal domain BG04_1852 PF00438 S-adenosylmethionine synthetase, N-terminal domain BG04_1853 PF01293 Phosphoenolpyruvate carboxykinase BG04_1854 PF10763 Protein of unknown function (DUF2584) BG04_1855 PF00326 Prolyl oligopeptidase family BG04_1857 PF00005 ABC transporter BG04_1858 PF00528 Binding-protein-dependent transport system inner membrane component BG04_1859 PF00293 NUDIX domain BG04_1861 PF05105 Bacteriophage holin family BG04_1862 PF00210 Ferritin-like domain BG04_1863 PF02664 S-Ribosylhomocysteinase (LuxS) BG04_1864 PF00484 Carbonic anhydrase BG04_1865 PF02492 CobW/HypB/UreG, nucleotide-binding domain BG04_1865 PF07683 Cobalamin synthesis protein cobW C-terminal domain BG04_1866 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BG04_1866 PF01297 Zinc-uptake complex component A periplasmic BG04_1867 PF01197 Ribosomal protein L31 BG04_1868 PF01654 Cytochrome bd terminal oxidase subunit I BG04_1869 PF02322 Cytochrome bd terminal oxidase subunit II BG04_187 PF00005 ABC transporter BG04_1870 PF00258 Flavodoxin BG04_1874 PF00268 Ribonucleotide reductase, small chain BG04_1875 PF00317 Ribonucleotide reductase, all-alpha domain BG04_1875 PF02867 Ribonucleotide reductase, barrel domain BG04_1875 PF03477 ATP cone domain BG04_1876 PF13378 Enolase C-terminal domain-like BG04_1876 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BG04_1877 PF00501 AMP-binding enzyme BG04_1877 PF13193 AMP-binding enzyme C-terminal domain BG04_1878 PF00378 Enoyl-CoA hydratase/isomerase BG04_1879 PF00561 alpha/beta hydrolase fold BG04_188 PF02687 FtsX-like permease family BG04_1880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BG04_1880 PF16582 Middle domain of thiamine pyrophosphate BG04_1880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BG04_1881 PF00425 chorismate binding enzyme BG04_1882 PF01258 Prokaryotic dksA/traR C4-type zinc finger BG04_1884 PF00343 Carbohydrate phosphorylase BG04_1885 PF00534 Glycosyl transferases group 1 BG04_1885 PF08323 Starch synthase catalytic domain BG04_1886 PF00483 Nucleotidyl transferase BG04_1888 PF02806 Alpha amylase, C-terminal all-beta domain BG04_1888 PF00128 Alpha amylase, catalytic domain BG04_1888 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BG04_189 PF00672 HAMP domain BG04_189 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_189 PF00512 His Kinase A (phospho-acceptor) domain BG04_19 PF13520 Amino acid permease BG04_190 PF00486 Transcriptional regulatory protein, C terminal BG04_190 PF00072 Response regulator receiver domain BG04_191 PF02567 Phenazine biosynthesis-like protein BG04_1912 PF00501 AMP-binding enzyme BG04_1912 PF13193 AMP-binding enzyme C-terminal domain BG04_1913 PF02308 MgtC family BG04_1914 PF14824 Sirohaem biosynthesis protein central BG04_1915 PF01903 CbiX BG04_1916 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BG04_1918 PF14306 PUA-like domain BG04_1918 PF01747 ATP-sulfurylase BG04_1919 PF01384 Phosphate transporter family BG04_1920 PF01507 Phosphoadenosine phosphosulfate reductase family BG04_1921 PF10372 Bacterial membrane-spanning protein N-terminus BG04_1921 PF02457 DisA bacterial checkpoint controller nucleotide-binding BG04_1922 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG04_1923 PF07885 Ion channel BG04_1923 PF02254 TrkA-N domain BG04_1924 PF08868 YugN-like family BG04_1925 PF00342 Phosphoglucose isomerase BG04_1927 PF00361 Proton-conducting membrane transporter BG04_1927 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BG04_1927 PF13244 Domain of unknown function (DUF4040) BG04_1928 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BG04_1929 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BG04_1930 PF00361 Proton-conducting membrane transporter BG04_1931 PF01899 Na+/H+ ion antiporter subunit BG04_1932 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BG04_1933 PF03334 Na+/H+ antiporter subunit BG04_1934 PF00465 Iron-containing alcohol dehydrogenase BG04_1935 PF04070 Domain of unknown function (DUF378) BG04_1936 PF00575 S1 RNA binding domain BG04_1937 PF00155 Aminotransferase class I and II BG04_1938 PF01037 Lrp/AsnC ligand binding domain BG04_1939 PF00561 alpha/beta hydrolase fold BG04_1939 PF08386 TAP-like protein BG04_194 PF13426 PAS domain BG04_194 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_194 PF00512 His Kinase A (phospho-acceptor) domain BG04_194 PF00989 PAS fold BG04_194 PF13188 PAS domain BG04_1940 PF00155 Aminotransferase class I and II BG04_1941 PF00080 Copper/zinc superoxide dismutase (SODC) BG04_1943 PF08810 Kinase associated protein B BG04_1944 PF00929 Exonuclease BG04_1945 PF03061 Thioesterase superfamily BG04_1947 PF01966 HD domain BG04_1949 PF13726 Na+-H+ antiporter family BG04_1949 PF03553 Na+/H+ antiporter family BG04_195 PF13302 Acetyltransferase (GNAT) domain BG04_1950 PF00883 Cytosol aminopeptidase family, catalytic domain BG04_1950 PF02789 Cytosol aminopeptidase family, N-terminal domain BG04_1951 PF02681 Divergent PAP2 family BG04_1952 PF06725 3D domain BG04_1953 PF14068 Putative membrane protein BG04_1954 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG04_1955 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG04_1957 PF01521 Iron-sulphur cluster biosynthesis BG04_1958 PF01678 Diaminopimelate epimerase BG04_1959 PF07293 Protein of unknown function (DUF1450) BG04_196 PF01266 FAD dependent oxidoreductase BG04_1960 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG04_1961 PF07315 Protein of unknown function (DUF1462) BG04_1962 PF01106 NifU-like domain BG04_1963 PF00288 GHMP kinases N terminal domain BG04_1963 PF08544 GHMP kinases C terminal BG04_1964 PF00291 Pyridoxal-phosphate dependent enzyme BG04_1965 PF01842 ACT domain BG04_1965 PF00742 Homoserine dehydrogenase BG04_1965 PF03447 Homoserine dehydrogenase, NAD binding domain BG04_1966 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BG04_1966 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BG04_1968 PF04608 Phosphatidylglycerophosphatase A BG04_1969 PF13344 Haloacid dehalogenase-like hydrolase BG04_1970 PF01934 Protein of unknown function DUF86 BG04_1972 PF06265 Protein of unknown function (DUF1027) BG04_1973 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BG04_1974 PF04055 Radical SAM superfamily BG04_1974 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BG04_1975 PF01551 Peptidase family M23 BG04_1977 PF00209 Sodium:neurotransmitter symporter family BG04_1978 PF09560 Sporulation protein YunB (Spo_YunB) BG04_1979 PF08827 Domain of unknown function (DUF1805) BG04_1980 PF01904 Protein of unknown function DUF72 BG04_1981 PF01458 Uncharacterized protein family (UPF0051) BG04_1982 PF01592 NifU-like N terminal domain BG04_1983 PF00266 Aminotransferase class-V BG04_1984 PF01458 Uncharacterized protein family (UPF0051) BG04_1985 PF00005 ABC transporter BG04_1986 PF02627 Carboxymuconolactone decarboxylase family BG04_1987 PF03180 NLPA lipoprotein BG04_1988 PF00528 Binding-protein-dependent transport system inner membrane component BG04_1989 PF09383 NIL domain BG04_1989 PF00005 ABC transporter BG04_1990 PF00085 Thioredoxin BG04_1991 PF01751 Toprim domain BG04_1993 PF01597 Glycine cleavage H-protein BG04_1994 PF03960 ArsC family BG04_1995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BG04_1995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BG04_1995 PF02770 Acyl-CoA dehydrogenase, middle domain BG04_1996 PF02803 Thiolase, C-terminal domain BG04_1996 PF00108 Thiolase, N-terminal domain BG04_1997 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BG04_1997 PF00378 Enoyl-CoA hydratase/isomerase BG04_1997 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BG04_1998 PF14115 YuzL-like protein BG04_1999 PF01619 Proline dehydrogenase BG04_20 PF02082 Transcriptional regulator BG04_2000 PF10835 Protein of unknown function (DUF2573) BG04_2002 PF00005 ABC transporter BG04_2003 PF01032 FecCD transport family BG04_2004 PF01032 FecCD transport family BG04_2005 PF01497 Periplasmic binding protein BG04_2006 PF13217 Protein of unknown function (DUF4025) BG04_2008 PF00873 AcrB/AcrD/AcrF family BG04_2009 PF00440 Bacterial regulatory proteins, tetR family BG04_2012 PF07690 Major Facilitator Superfamily BG04_2013 PF02627 Carboxymuconolactone decarboxylase family BG04_2014 PF03466 LysR substrate binding domain BG04_2014 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_2015 PF02525 Flavodoxin-like fold BG04_2016 PF00672 HAMP domain BG04_2016 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_2016 PF00512 His Kinase A (phospho-acceptor) domain BG04_2017 PF00072 Response regulator receiver domain BG04_2017 PF00486 Transcriptional regulatory protein, C terminal BG04_2018 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BG04_2019 PF01569 PAP2 superfamily BG04_202 PF00248 Aldo/keto reductase family BG04_2020 PF01047 MarR family BG04_2021 PF00881 Nitroreductase family BG04_2022 PF02597 ThiS family BG04_2023 PF02391 MoaE protein BG04_2024 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BG04_2025 PF03453 MoeA N-terminal region (domain I and II) BG04_2025 PF00994 Probable molybdopterin binding domain BG04_2025 PF03454 MoeA C-terminal region (domain IV) BG04_2026 PF00899 ThiF family BG04_2027 PF12804 MobA-like NTP transferase domain BG04_2028 PF06463 Molybdenum Cofactor Synthesis C BG04_2028 PF04055 Radical SAM superfamily BG04_2029 PF02634 FdhD/NarQ family BG04_2030 PF10057 Uncharacterized conserved protein (DUF2294) BG04_2031 PF00037 4Fe-4S binding domain BG04_2031 PF00384 Molybdopterin oxidoreductase BG04_2031 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BG04_2031 PF01568 Molydopterin dinucleotide binding domain BG04_2031 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BG04_2032 PF07849 Protein of unknown function (DUF1641) BG04_2034 PF00528 Binding-protein-dependent transport system inner membrane component BG04_2035 PF01668 SmpB protein BG04_2036 PF00773 RNB domain BG04_2036 PF00575 S1 RNA binding domain BG04_2036 PF08206 Ribonuclease B OB domain BG04_2036 PF17876 Cold shock domain BG04_2037 PF12146 Serine aminopeptidase, S33 BG04_2038 PF03840 Preprotein translocase SecG subunit BG04_2039 PF00113 Enolase, C-terminal TIM barrel domain BG04_2039 PF03952 Enolase, N-terminal domain BG04_204 PF00892 EamA-like transporter family BG04_2040 PF01676 Metalloenzyme superfamily BG04_2040 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BG04_2041 PF00121 Triosephosphate isomerase BG04_2042 PF00162 Phosphoglycerate kinase BG04_2043 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BG04_2043 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BG04_2044 PF04198 Putative sugar-binding domain BG04_2046 PF04552 Sigma-54, DNA binding domain BG04_2046 PF00309 Sigma-54 factor, Activator interacting domain (AID) BG04_2046 PF04963 Sigma-54 factor, core binding domain BG04_2049 PF00574 Clp protease BG04_205 PF02311 AraC-like ligand binding domain BG04_205 PF12833 Helix-turn-helix domain BG04_2050 PF00381 PTS HPr component phosphorylation site BG04_2051 PF02650 WhiA C-terminal HTH domain BG04_2051 PF14527 WhiA LAGLIDADG-like domain BG04_2051 PF10298 WhiA N-terminal LAGLIDADG-like domain BG04_2052 PF01933 Uncharacterised protein family UPF0052 BG04_2053 PF03668 P-loop ATPase protein family BG04_2054 PF00293 NUDIX domain BG04_2055 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG04_2057 PF01502 Phosphoribosyl-AMP cyclohydrolase BG04_2057 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BG04_2058 PF00977 Histidine biosynthesis protein BG04_2059 PF00977 Histidine biosynthesis protein BG04_2060 PF00117 Glutamine amidotransferase class-I BG04_2061 PF00475 Imidazoleglycerol-phosphate dehydratase BG04_2062 PF00815 Histidinol dehydrogenase BG04_2063 PF01634 ATP phosphoribosyltransferase BG04_2064 PF13393 Histidyl-tRNA synthetase BG04_2065 PF14602 Hexapeptide repeat of succinyl-transferase BG04_2066 PF13419 Haloacid dehalogenase-like hydrolase BG04_2067 PF01790 Prolipoprotein diacylglyceryl transferase BG04_2068 PF02603 HPr Serine kinase N terminus BG04_2068 PF07475 HPr Serine kinase C-terminal domain BG04_2069 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BG04_2070 PF04024 PspC domain BG04_2071 PF13349 Putative adhesin BG04_2073 PF17760 UvrA interaction domain BG04_2073 PF17755 UvrA DNA-binding domain BG04_2073 PF00005 ABC transporter BG04_2074 PF02151 UvrB/uvrC motif BG04_2074 PF12344 Ultra-violet resistance protein B BG04_2074 PF00271 Helicase conserved C-terminal domain BG04_2074 PF04851 Type III restriction enzyme, res subunit BG04_2074 PF17757 UvrB interaction domain BG04_2075 PF02954 Bacterial regulatory protein, Fis family BG04_2075 PF00072 Response regulator receiver domain BG04_2075 PF00158 Sigma-54 interaction domain BG04_2076 PF00171 Aldehyde dehydrogenase family BG04_2077 PF01619 Proline dehydrogenase BG04_2079 PF17820 PDZ domain BG04_208 PF00741 Gas vesicle protein BG04_2080 PF17820 PDZ domain BG04_2080 PF03572 Peptidase family S41 BG04_2080 PF01471 Putative peptidoglycan binding domain BG04_2081 PF08525 Opacity-associated protein A N-terminal motif BG04_2081 PF01476 LysM domain BG04_2081 PF01551 Peptidase family M23 BG04_2082 PF18075 FtsX extracellular domain BG04_2082 PF02687 FtsX-like permease family BG04_2083 PF00005 ABC transporter BG04_2084 PF03358 NADPH-dependent FMN reductase BG04_2085 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BG04_2086 PF00902 Sec-independent protein translocase protein (TatC) BG04_2087 PF02416 mttA/Hcf106 family BG04_2088 PF16655 PhoD-like phosphatase, N-terminal domain BG04_2088 PF09423 PhoD-like phosphatase BG04_2089 PF00472 RF-1 domain BG04_2089 PF03462 PCRF domain BG04_209 PF05121 Gas vesicle protein K BG04_209 PF00741 Gas vesicle protein BG04_2090 PF02810 SEC-C motif BG04_2090 PF07517 SecA DEAD-like domain BG04_2090 PF01043 SecA preprotein cross-linking domain BG04_2090 PF07516 SecA Wing and Scaffold domain BG04_2091 PF00583 Acetyltransferase (GNAT) family BG04_2091 PF09500 Putative thioesterase (yiiD_Cterm) BG04_2092 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BG04_2092 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BG04_2094 PF02561 Flagellar protein FliS BG04_2095 PF02465 Flagellar hook-associated protein 2 N-terminus BG04_2095 PF07195 Flagellar hook-associated protein 2 C-terminus BG04_2095 PF07196 Flagellin hook IN motif BG04_2097 PF00324 Amino acid permease BG04_210 PF00741 Gas vesicle protein BG04_2100 PF00465 Iron-containing alcohol dehydrogenase BG04_2102 PF02599 Global regulator protein family BG04_2103 PF02623 FliW protein BG04_2104 PF00669 Bacterial flagellin N-terminal helical region BG04_2104 PF00700 Bacterial flagellin C-terminal helical region BG04_2105 PF00460 Flagella basal body rod protein BG04_2105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BG04_2110 PF04851 Type III restriction enzyme, res subunit BG04_2110 PF00271 Helicase conserved C-terminal domain BG04_2111 PF02645 Uncharacterised protein, DegV family COG1307 BG04_2112 PF03885 Protein of unknown function (DUF327) BG04_2114 PF00196 Bacterial regulatory proteins, luxR family BG04_2114 PF00072 Response regulator receiver domain BG04_2115 PF05384 Sensor protein DegS BG04_2115 PF07730 Histidine kinase BG04_2115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_2116 PF01205 Uncharacterized protein family UPF0029 BG04_2116 PF09186 Domain of unknown function (DUF1949) BG04_2117 PF03816 Cell envelope-related transcriptional attenuator domain BG04_2118 PF00953 Glycosyl transferase family 4 BG04_2120 PF15975 Flotillin BG04_2120 PF01145 SPFH domain / Band 7 family BG04_2121 PF03808 Glycosyl transferase WecB/TagA/CpsF family BG04_2122 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BG04_2122 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BG04_2122 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BG04_2123 PF00483 Nucleotidyl transferase BG04_2125 PF00176 SNF2 family N-terminal domain BG04_2125 PF00271 Helicase conserved C-terminal domain BG04_2125 PF12419 SNF2 Helicase protein BG04_2126 PF01476 LysM domain BG04_2126 PF00877 NlpC/P60 family BG04_2127 PF00436 Single-strand binding protein family BG04_2128 PF14183 YwpF-like protein BG04_2130 PF01381 Helix-turn-helix BG04_2131 PF07977 FabA-like domain BG04_2132 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BG04_2132 PF00460 Flagella basal body rod protein BG04_2133 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BG04_2133 PF00460 Flagella basal body rod protein BG04_2135 PF12116 Stage III sporulation protein D BG04_2136 PF01551 Peptidase family M23 BG04_2137 PF08486 Stage II sporulation protein BG04_2138 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BG04_214 PF07728 AAA domain (dynein-related subfamily) BG04_2140 PF06612 Protein of unknown function (DUF1146) BG04_2141 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BG04_2141 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BG04_2142 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BG04_2142 PF02874 ATP synthase alpha/beta family, beta-barrel domain BG04_2143 PF00231 ATP synthase BG04_2144 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BG04_2144 PF02874 ATP synthase alpha/beta family, beta-barrel domain BG04_2144 PF00306 ATP synthase alpha/beta chain, C terminal domain BG04_2145 PF00213 ATP synthase delta (OSCP) subunit BG04_2146 PF00430 ATP synthase B/B' CF(0) BG04_2147 PF00137 ATP synthase subunit C BG04_2148 PF00119 ATP synthase A chain BG04_2149 PF03899 ATP synthase I chain BG04_2151 PF13860 FlgD Ig-like domain BG04_2151 PF02225 PA domain BG04_2151 PF05922 Peptidase inhibitor I9 BG04_2151 PF00082 Subtilase family BG04_2152 PF02350 UDP-N-acetylglucosamine 2-epimerase BG04_2154 PF00464 Serine hydroxymethyltransferase BG04_2155 PF04260 Protein of unknown function (DUF436) BG04_2156 PF02502 Ribose/Galactose Isomerase BG04_2157 PF01451 Low molecular weight phosphotyrosine protein phosphatase BG04_2158 PF02659 Putative manganese efflux pump BG04_2159 PF01300 Telomere recombination BG04_2159 PF03481 Putative GTP-binding controlling metal-binding BG04_216 PF00741 Gas vesicle protein BG04_2161 PF09551 Stage II sporulation protein R (spore_II_R) BG04_2162 PF17827 PrmC N-terminal domain BG04_2162 PF13847 Methyltransferase domain BG04_2163 PF03462 PCRF domain BG04_2163 PF00472 RF-1 domain BG04_2164 PF00265 Thymidine kinase BG04_2165 PF01197 Ribosomal protein L31 BG04_2166 PF07498 Rho termination factor, N-terminal domain BG04_2166 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BG04_2166 PF07497 Rho termination factor, RNA-binding domain BG04_2167 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BG04_2168 PF00923 Transaldolase/Fructose-6-phosphate aldolase BG04_2169 PF01116 Fructose-bisphosphate aldolase class-II BG04_2170 PF00072 Response regulator receiver domain BG04_2171 PF10740 Domain of unknown function (DUF2529) BG04_2172 PF00117 Glutamine amidotransferase class-I BG04_2172 PF06418 CTP synthase N-terminus BG04_2173 PF05066 HB1, ASXL, restriction endonuclease HTH domain BG04_2174 PF01642 Methylmalonyl-CoA mutase BG04_2174 PF02310 B12 binding domain BG04_2176 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BG04_2176 PF02770 Acyl-CoA dehydrogenase, middle domain BG04_2176 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BG04_2177 PF02770 Acyl-CoA dehydrogenase, middle domain BG04_2177 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BG04_2177 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BG04_2178 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BG04_2178 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BG04_2179 PF02803 Thiolase, C-terminal domain BG04_2179 PF00108 Thiolase, N-terminal domain BG04_2180 PF02754 Cysteine-rich domain BG04_2180 PF13183 4Fe-4S dicluster domain BG04_2181 PF13091 PLD-like domain BG04_2183 PF05746 DALR anticodon binding domain BG04_2183 PF03485 Arginyl tRNA synthetase N terminal domain BG04_2183 PF00750 tRNA synthetases class I (R) BG04_2184 PF09148 Domain of unknown function (DUF1934) BG04_2185 PF00491 Arginase family BG04_2186 PF17284 Spermidine synthase tetramerisation domain BG04_2187 PF00905 Penicillin binding protein transpeptidase domain BG04_2187 PF00912 Transglycosylase BG04_2188 PF08741 YwhD family BG04_2189 PF02163 Peptidase family M50 BG04_219 PF00741 Gas vesicle protein BG04_2190 PF01361 Tautomerase enzyme BG04_2192 PF01966 HD domain BG04_2193 PF07293 Protein of unknown function (DUF1450) BG04_2195 PF03099 Biotin/lipoate A/B protein ligase family BG04_2196 PF01515 Phosphate acetyl/butaryl transferase BG04_2198 PF07486 Cell Wall Hydrolase BG04_2199 PF09671 Spore coat protein (Spore_GerQ) BG04_220 PF11181 Heat induced stress protein YflT BG04_220 PF09557 Domain of unknown function (DUF2382) BG04_2200 PF04241 Protein of unknown function (DUF423) BG04_2202 PF03167 Uracil DNA glycosylase superfamily BG04_2204 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BG04_2204 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BG04_2205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BG04_2205 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BG04_2206 PF06018 CodY GAF-like domain BG04_2206 PF17853 GGDEF-like domain BG04_2206 PF13556 PucR C-terminal helix-turn-helix domain BG04_2207 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BG04_2207 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BG04_2209 PF08543 Phosphomethylpyrimidine kinase BG04_2211 PF13419 Haloacid dehalogenase-like hydrolase BG04_2212 PF02378 Phosphotransferase system, EIIC BG04_2212 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BG04_2212 PF00367 phosphotransferase system, EIIB BG04_2213 PF03372 Endonuclease/Exonuclease/phosphatase family BG04_2214 PF00535 Glycosyl transferase family 2 BG04_2217 PF00534 Glycosyl transferases group 1 BG04_2217 PF13439 Glycosyltransferase Family 4 BG04_2219 PF03023 Lipid II flippase MurJ BG04_222 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_222 PF03466 LysR substrate binding domain BG04_2222 PF00664 ABC transporter transmembrane region BG04_2222 PF00005 ABC transporter BG04_2223 PF00005 ABC transporter BG04_2223 PF00664 ABC transporter transmembrane region BG04_2224 PF02322 Cytochrome bd terminal oxidase subunit II BG04_2225 PF01654 Cytochrome bd terminal oxidase subunit I BG04_2226 PF12821 Threonine/Serine exporter, ThrE BG04_2227 PF06738 Putative threonine/serine exporter BG04_2228 PF00356 Bacterial regulatory proteins, lacI family BG04_2230 PF00083 Sugar (and other) transporter BG04_2231 PF00171 Aldehyde dehydrogenase family BG04_2232 PF00696 Amino acid kinase family BG04_2233 PF02554 Carbon starvation protein CstA BG04_2233 PF13722 5TM C-terminal transporter carbon starvation CstA BG04_2234 PF06628 Catalase-related immune-responsive BG04_2234 PF00199 Catalase BG04_2235 PF00512 His Kinase A (phospho-acceptor) domain BG04_2235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_2235 PF00989 PAS fold BG04_2235 PF16736 Single Cache-like BG04_2236 PF00486 Transcriptional regulatory protein, C terminal BG04_2236 PF00072 Response regulator receiver domain BG04_2237 PF00128 Alpha amylase, catalytic domain BG04_2237 PF09154 Domain of unknown function (DUF1939) BG04_2238 PF00939 Sodium:sulfate symporter transmembrane region BG04_2239 PF10672 S-adenosylmethionine-dependent methyltransferase BG04_2239 PF17785 PUA-like domain BG04_224 PF00375 Sodium:dicarboxylate symporter family BG04_2241 PF01207 Dihydrouridine synthase (Dus) BG04_2242 PF02590 Predicted SPOUT methyltransferase BG04_2244 PF13180 PDZ domain BG04_2245 PF00753 Metallo-beta-lactamase superfamily BG04_2246 PF09648 YycH protein BG04_2248 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_2248 PF00672 HAMP domain BG04_2248 PF00512 His Kinase A (phospho-acceptor) domain BG04_2248 PF13426 PAS domain BG04_2249 PF00486 Transcriptional regulatory protein, C terminal BG04_2249 PF00072 Response regulator receiver domain BG04_225 PF03831 PhnA domain BG04_225 PF08274 PhnA Zinc-Ribbon BG04_2254 PF00709 Adenylosuccinate synthetase BG04_2255 PF00772 DnaB-like helicase N terminal domain BG04_2255 PF03796 DnaB-like helicase C terminal domain BG04_2256 PF01281 Ribosomal protein L9, N-terminal domain BG04_2256 PF03948 Ribosomal protein L9, C-terminal domain BG04_2257 PF02272 DHHA1 domain BG04_2257 PF01368 DHH family BG04_2259 PF01084 Ribosomal protein S18 BG04_2260 PF00436 Single-strand binding protein family BG04_2261 PF01250 Ribosomal protein S6 BG04_2262 PF06071 Protein of unknown function (DUF933) BG04_2262 PF01926 50S ribosome-binding GTPase BG04_2263 PF06107 Bacterial protein of unknown function (DUF951) BG04_2264 PF00924 Mechanosensitive ion channel BG04_2266 PF06866 Protein of unknown function (DUF1256) BG04_2267 PF17762 HTH domain found in ParB protein BG04_2267 PF02195 ParB-like nuclease domain BG04_2268 PF13614 AAA domain BG04_2269 PF02195 ParB-like nuclease domain BG04_2269 PF17762 HTH domain found in ParB protein BG04_2270 PF02527 rRNA small subunit methyltransferase G BG04_2271 PF13932 GidA associated domain BG04_2271 PF01134 Glucose inhibited division protein A BG04_2272 PF12631 MnmE helical domain BG04_2272 PF01926 50S ribosome-binding GTPase BG04_2272 PF10396 GTP-binding protein TrmE N-terminus BG04_2273 PF01424 R3H domain BG04_2273 PF14804 Jag N-terminus BG04_2274 PF02096 60Kd inner membrane protein BG04_2275 PF00825 Ribonuclease P BG04_2276 PF00468 Ribosomal protein L34 BG04_2277 PF08299 Bacterial dnaA protein helix-turn-helix BG04_2277 PF11638 DnaA N-terminal domain BG04_2277 PF00308 Bacterial dnaA protein BG04_2278 PF02768 DNA polymerase III beta subunit, C-terminal domain BG04_2278 PF02767 DNA polymerase III beta subunit, central domain BG04_2278 PF00712 DNA polymerase III beta subunit, N-terminal domain BG04_2280 PF02463 RecF/RecN/SMC N terminal domain BG04_2281 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_2281 PF00204 DNA gyrase B BG04_2281 PF00986 DNA gyrase B subunit, carboxyl terminus BG04_2281 PF01751 Toprim domain BG04_2282 PF00521 DNA gyrase/topoisomerase IV, subunit A BG04_2282 PF03989 DNA gyrase C-terminal domain, beta-propeller BG04_2288 PF14175 YaaC-like Protein BG04_2289 PF00571 CBS domain BG04_2289 PF00478 IMP dehydrogenase / GMP reductase domain BG04_2290 PF00768 D-alanyl-D-alanine carboxypeptidase BG04_2290 PF07943 Penicillin-binding protein 5, C-terminal domain BG04_2291 PF01680 SOR/SNZ family BG04_2292 PF01174 SNO glutamine amidotransferase family BG04_2293 PF02403 Seryl-tRNA synthetase N-terminal domain BG04_2293 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BG04_2295 PF01712 Deoxynucleoside kinase BG04_2296 PF01712 Deoxynucleoside kinase BG04_2297 PF01476 LysM domain BG04_2297 PF00704 Glycosyl hydrolases family 18 BG04_2298 PF00857 Isochorismatase family BG04_2299 PF14437 MafB19-like deaminase BG04_2300 PF12169 DNA polymerase III subunits gamma and tau domain III BG04_2301 PF02575 YbaB/EbfC DNA-binding family BG04_2302 PF13662 Toprim domain BG04_2302 PF02132 RecR protein BG04_2303 PF10704 Protein of unknown function (DUF2508) BG04_2304 PF07441 SigmaK-factor processing regulatory protein BofA BG04_231 PF12146 Serine aminopeptidase, S33 BG04_231 PF13026 Protein of unknown function (DUF3887) BG04_2323 PF01276 Orn/Lys/Arg decarboxylase, major domain BG04_2323 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BG04_2324 PF02223 Thymidylate kinase BG04_2325 PF06153 Cyclic-di-AMP receptor BG04_2326 PF09115 DNA polymerase III, delta subunit, C terminal BG04_2327 PF04468 PSP1 C-terminal conserved region BG04_2328 PF06156 Initiation control protein YabA BG04_2329 PF05175 Methyltransferase small domain BG04_233 PF00890 FAD binding domain BG04_233 PF02910 Fumarate reductase flavoprotein C-term BG04_2330 PF01541 GIY-YIG catalytic domain BG04_2331 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BG04_2332 PF18277 AbrB C-terminal domain BG04_2332 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BG04_2333 PF09334 tRNA synthetases class I (M) BG04_2333 PF08264 Anticodon-binding domain of tRNA BG04_2333 PF01588 Putative tRNA binding domain BG04_2334 PF01026 TatD related DNase BG04_2335 PF13331 Domain of unknown function (DUF4093) BG04_2335 PF13662 Toprim domain BG04_2336 PF00398 Ribosomal RNA adenine dimethylase BG04_2337 PF05582 YabG peptidase U57 BG04_2338 PF06257 Biofilm formation stimulator VEG BG04_2339 PF00269 Small, acid-soluble spore proteins, alpha/beta type BG04_234 PF07690 Major Facilitator Superfamily BG04_2340 PF00288 GHMP kinases N terminal domain BG04_2340 PF08544 GHMP kinases C terminal BG04_2341 PF00156 Phosphoribosyl transferase domain BG04_2341 PF09182 Bacterial purine repressor, N-terminal BG04_2342 PF01042 Endoribonuclease L-PSP BG04_2343 PF04026 SpoVG BG04_2344 PF00483 Nucleotidyl transferase BG04_2344 PF00132 Bacterial transferase hexapeptide (six repeats) BG04_2345 PF14572 Phosphoribosyl synthetase-associated domain BG04_2345 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BG04_2346 PF01386 Ribosomal L25p family BG04_2346 PF14693 Ribosomal protein TL5, C-terminal domain BG04_2347 PF01195 Peptidyl-tRNA hydrolase BG04_2348 PF10955 Protein of unknown function (DUF2757) BG04_2349 PF03461 TRCF domain BG04_2349 PF00271 Helicase conserved C-terminal domain BG04_2349 PF00270 DEAD/DEAH box helicase BG04_2349 PF02559 CarD-like/TRCF domain BG04_2349 PF17757 UvrB interaction domain BG04_235 PF13302 Acetyltransferase (GNAT) domain BG04_2350 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BG04_2350 PF15714 Stage V sporulation protein T C-terminal, transcription factor BG04_2351 PF01943 Polysaccharide biosynthesis protein BG04_2351 PF14667 Polysaccharide biosynthesis C-terminal domain BG04_2352 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BG04_2352 PF03819 MazG nucleotide pyrophosphohydrolase domain BG04_2353 PF01479 S4 domain BG04_2354 PF07873 YabP family BG04_2355 PF09578 Spore cortex protein YabQ (Spore_YabQ) BG04_2356 PF04977 Septum formation initiator BG04_2357 PF00575 S1 RNA binding domain BG04_2360 PF07228 Stage II sporulation protein E (SpoIIE) BG04_2361 PF00092 von Willebrand factor type A domain BG04_2362 PF00069 Protein kinase domain BG04_2363 PF11734 TilS substrate C-terminal domain BG04_2363 PF09179 TilS substrate binding domain BG04_2363 PF01171 PP-loop family BG04_2365 PF17862 AAA+ lid domain BG04_2365 PF06480 FtsH Extracellular BG04_2365 PF01434 Peptidase family M41 BG04_2365 PF00004 ATPase family associated with various cellular activities (AAA) BG04_2366 PF03309 Type III pantothenate kinase BG04_2367 PF01430 Hsp33 protein BG04_2368 PF00291 Pyridoxal-phosphate dependent enzyme BG04_2369 PF04715 Anthranilate synthase component I, N terminal region BG04_2369 PF00425 chorismate binding enzyme BG04_237 PF01546 Peptidase family M20/M25/M40 BG04_237 PF07687 Peptidase dimerisation domain BG04_2370 PF00117 Glutamine amidotransferase class-I BG04_2371 PF01063 Amino-transferase class IV BG04_2372 PF02152 Dihydroneopterin aldolase BG04_2373 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BG04_2374 PF01336 OB-fold nucleic acid binding domain BG04_2374 PF00152 tRNA synthetases class II (D, K and N) BG04_2378 PF05848 CtsR N-terminal HTH domain BG04_2378 PF17727 CtsR C-terminal dimerization domain BG04_2379 PF02151 UvrB/uvrC motif BG04_238 PF00296 Luciferase-like monooxygenase BG04_2380 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BG04_2381 PF07724 AAA domain (Cdc48 subfamily) BG04_2381 PF00004 ATPase family associated with various cellular activities (AAA) BG04_2381 PF17871 AAA lid domain BG04_2381 PF02861 Clp amino terminal domain, pathogenicity island component BG04_2381 PF10431 C-terminal, D2-small domain, of ClpB protein BG04_2382 PF18073 Rubredoxin metal binding domain BG04_2383 PF10635 DisA bacterial checkpoint controller linker region BG04_2383 PF02457 DisA bacterial checkpoint controller nucleotide-binding BG04_2385 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BG04_2386 PF02542 YgbB family BG04_2387 PF00749 tRNA synthetases class I (E and Q), catalytic domain BG04_2388 PF00132 Bacterial transferase hexapeptide (six repeats) BG04_2388 PF06426 Serine acetyltransferase, N-terminal BG04_2389 PF09190 DALR domain BG04_2389 PF01406 tRNA synthetases class I (C) catalytic domain BG04_239 PF00296 Luciferase-like monooxygenase BG04_2390 PF00636 Ribonuclease III domain BG04_2391 PF00588 SpoU rRNA Methylase family BG04_2391 PF08032 RNA 2'-O ribose methyltransferase substrate binding BG04_2392 PF05991 YacP-like NYN domain BG04_2393 PF08281 Sigma-70, region 4 BG04_2393 PF04542 Sigma-70 region 2 BG04_2394 PF00471 Ribosomal protein L33 BG04_2395 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BG04_2396 PF00467 KOW motif BG04_2396 PF02357 Transcription termination factor nusG BG04_2397 PF03946 Ribosomal protein L11, N-terminal domain BG04_2397 PF00298 Ribosomal protein L11, RNA binding domain BG04_2398 PF00687 Ribosomal protein L1p/L10e family BG04_2399 PF00466 Ribosomal protein L10 BG04_24 PF00390 Malic enzyme, N-terminal domain BG04_24 PF03949 Malic enzyme, NAD binding domain BG04_240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BG04_240 PF02770 Acyl-CoA dehydrogenase, middle domain BG04_240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BG04_2401 PF05175 Methyltransferase small domain BG04_2402 PF04565 RNA polymerase Rpb2, domain 3 BG04_2402 PF04560 RNA polymerase Rpb2, domain 7 BG04_2402 PF04561 RNA polymerase Rpb2, domain 2 BG04_2402 PF00562 RNA polymerase Rpb2, domain 6 BG04_2402 PF04563 RNA polymerase beta subunit BG04_2402 PF10385 RNA polymerase beta subunit external 1 domain BG04_2403 PF04997 RNA polymerase Rpb1, domain 1 BG04_2403 PF05000 RNA polymerase Rpb1, domain 4 BG04_2403 PF00623 RNA polymerase Rpb1, domain 2 BG04_2403 PF04998 RNA polymerase Rpb1, domain 5 BG04_2403 PF04983 RNA polymerase Rpb1, domain 3 BG04_2404 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BG04_2405 PF00164 Ribosomal protein S12/S23 BG04_2406 PF00177 Ribosomal protein S7p/S5e BG04_2407 PF03144 Elongation factor Tu domain 2 BG04_2407 PF03764 Elongation factor G, domain IV BG04_2407 PF00009 Elongation factor Tu GTP binding domain BG04_2407 PF14492 Elongation Factor G, domain II BG04_2407 PF00679 Elongation factor G C-terminus BG04_2408 PF03143 Elongation factor Tu C-terminal domain BG04_2408 PF03144 Elongation factor Tu domain 2 BG04_2408 PF00009 Elongation factor Tu GTP binding domain BG04_2409 PF00338 Ribosomal protein S10p/S20e BG04_241 PF08240 Alcohol dehydrogenase GroES-like domain BG04_241 PF00107 Zinc-binding dehydrogenase BG04_2410 PF00297 Ribosomal protein L3 BG04_2411 PF00573 Ribosomal protein L4/L1 family BG04_2412 PF00276 Ribosomal protein L23 BG04_2413 PF03947 Ribosomal Proteins L2, C-terminal domain BG04_2413 PF00181 Ribosomal Proteins L2, RNA binding domain BG04_2414 PF00203 Ribosomal protein S19 BG04_2415 PF00237 Ribosomal protein L22p/L17e BG04_2416 PF07650 KH domain BG04_2416 PF00189 Ribosomal protein S3, C-terminal domain BG04_2417 PF00252 Ribosomal protein L16p/L10e BG04_2418 PF00831 Ribosomal L29 protein BG04_2419 PF00366 Ribosomal protein S17 BG04_242 PF00486 Transcriptional regulatory protein, C terminal BG04_242 PF00072 Response regulator receiver domain BG04_2420 PF00238 Ribosomal protein L14p/L23e BG04_2421 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BG04_2421 PF00467 KOW motif BG04_2422 PF00281 Ribosomal protein L5 BG04_2422 PF00673 ribosomal L5P family C-terminus BG04_2423 PF00253 Ribosomal protein S14p/S29e BG04_2424 PF00410 Ribosomal protein S8 BG04_2425 PF00347 Ribosomal protein L6 BG04_2426 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BG04_2427 PF00333 Ribosomal protein S5, N-terminal domain BG04_2427 PF03719 Ribosomal protein S5, C-terminal domain BG04_2428 PF00327 Ribosomal protein L30p/L7e BG04_2429 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BG04_243 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_2430 PF00344 SecY translocase BG04_2431 PF05191 Adenylate kinase, active site lid BG04_2432 PF00557 Metallopeptidase family M24 BG04_2433 PF01176 Translation initiation factor 1A / IF-1 BG04_2434 PF00416 Ribosomal protein S13/S18 BG04_2435 PF00411 Ribosomal protein S11 BG04_2436 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BG04_2436 PF01000 RNA polymerase Rpb3/RpoA insert domain BG04_2436 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BG04_2437 PF01196 Ribosomal protein L17 BG04_2438 PF00005 ABC transporter BG04_2439 PF00005 ABC transporter BG04_244 PF00005 ABC transporter BG04_2440 PF02361 Cobalt transport protein BG04_2441 PF01416 tRNA pseudouridine synthase BG04_2442 PF00572 Ribosomal protein L13 BG04_2443 PF00380 Ribosomal protein S9/S16 BG04_2445 PF01520 N-acetylmuramoyl-L-alanine amidase BG04_2446 PF10609 NUBPL iron-transfer P-loop NTPase BG04_2447 PF03466 LysR substrate binding domain BG04_2447 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_2448 PF17898 Spore germination GerD central core domain BG04_2449 PF14089 KinB-signalling pathway activation in sporulation BG04_2450 PF01522 Polysaccharide deacetylase BG04_2464 PF00491 Arginase family BG04_2466 PF04542 Sigma-70 region 2 BG04_2466 PF08281 Sigma-70, region 4 BG04_2467 PF13490 Putative zinc-finger BG04_2468 PF02457 DisA bacterial checkpoint controller nucleotide-binding BG04_2470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BG04_2470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BG04_2470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BG04_2470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BG04_2471 PF01380 SIS domain BG04_2472 PF01709 Transcriptional regulator BG04_2473 PF08239 Bacterial SH3 domain BG04_2473 PF00877 NlpC/P60 family BG04_2473 PF01476 LysM domain BG04_2474 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BG04_2474 PF02378 Phosphotransferase system, EIIC BG04_2474 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BG04_2475 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BG04_2475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BG04_2475 PF00874 PRD domain BG04_2475 PF05043 Mga helix-turn-helix domain BG04_2475 PF08279 HTH domain BG04_2476 PF08125 Mannitol dehydrogenase C-terminal domain BG04_2476 PF01232 Mannitol dehydrogenase Rossmann domain BG04_2478 PF03734 L,D-transpeptidase catalytic domain BG04_2479 PF01741 Large-conductance mechanosensitive channel, MscL BG04_248 PF00155 Aminotransferase class I and II BG04_2480 PF00884 Sulfatase BG04_2482 PF00005 ABC transporter BG04_2482 PF08402 TOBE domain BG04_2483 PF00528 Binding-protein-dependent transport system inner membrane component BG04_2484 PF00528 Binding-protein-dependent transport system inner membrane component BG04_2485 PF13416 Bacterial extracellular solute-binding protein BG04_2487 PF00486 Transcriptional regulatory protein, C terminal BG04_2487 PF00072 Response regulator receiver domain BG04_2488 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_2488 PF00512 His Kinase A (phospho-acceptor) domain BG04_2490 PF02424 ApbE family BG04_2491 PF01794 Ferric reductase like transmembrane component BG04_2491 PF04205 FMN-binding domain BG04_2492 PF07478 D-ala D-ala ligase C-terminus BG04_2492 PF01820 D-ala D-ala ligase N-terminus BG04_2493 PF01225 Mur ligase family, catalytic domain BG04_2493 PF02875 Mur ligase family, glutamate ligase domain BG04_2493 PF08245 Mur ligase middle domain BG04_2494 PF00271 Helicase conserved C-terminal domain BG04_2494 PF00270 DEAD/DEAH box helicase BG04_2495 PF03851 UV-endonuclease UvdE BG04_2496 PF01694 Rhomboid family BG04_2497 PF01648 4'-phosphopantetheinyl transferase superfamily BG04_2499 PF00842 Alanine racemase, C-terminal domain BG04_2499 PF01168 Alanine racemase, N-terminal domain BG04_25 PF02522 Aminoglycoside 3-N-acetyltransferase BG04_250 PF01925 Sulfite exporter TauE/SafE BG04_2500 PF01402 Ribbon-helix-helix protein, copG family BG04_2501 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BG04_2502 PF08678 Rsbr N terminal BG04_2502 PF01740 STAS domain BG04_2503 PF01740 STAS domain BG04_2504 PF13581 Histidine kinase-like ATPase domain BG04_2505 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain BG04_2505 PF07228 Stage II sporulation protein E (SpoIIE) BG04_2506 PF01740 STAS domain BG04_2507 PF13581 Histidine kinase-like ATPase domain BG04_2508 PF04539 Sigma-70 region 3 BG04_2508 PF04542 Sigma-70 region 2 BG04_2508 PF04545 Sigma-70, region 4 BG04_2509 PF07228 Stage II sporulation protein E (SpoIIE) BG04_251 PF01206 Sulfurtransferase TusA BG04_2510 PF00575 S1 RNA binding domain BG04_2510 PF17674 HHH domain BG04_2510 PF09371 Tex-like protein N-terminal domain BG04_2510 PF16921 Tex protein YqgF-like domain BG04_2511 PF10263 SprT-like family BG04_2511 PF17283 SprT-like zinc ribbon domain BG04_252 PF00581 Rhodanese-like domain BG04_252 PF00753 Metallo-beta-lactamase superfamily BG04_2528 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BG04_2529 PF00814 Glycoprotease family BG04_253 PF01206 Sulfurtransferase TusA BG04_253 PF00581 Rhodanese-like domain BG04_2530 PF00583 Acetyltransferase (GNAT) family BG04_2531 PF00814 Glycoprotease family BG04_2532 PF00005 ABC transporter BG04_2532 PF16326 ABC transporter C-terminal domain BG04_2532 PF12848 ABC transporter BG04_2533 PF02629 CoA binding domain BG04_2533 PF06971 Putative DNA-binding protein N-terminus BG04_2534 PF02416 mttA/Hcf106 family BG04_2535 PF00902 Sec-independent protein translocase protein (TatC) BG04_2537 PF02517 CPBP intramembrane metalloprotease BG04_2538 PF00166 Chaperonin 10 Kd subunit BG04_2539 PF00118 TCP-1/cpn60 chaperonin family BG04_2540 PF00158 Sigma-54 interaction domain BG04_2540 PF00072 Response regulator receiver domain BG04_2540 PF02954 Bacterial regulatory protein, Fis family BG04_2541 PF07005 Sugar-binding N-terminal domain BG04_2541 PF17042 Nucleotide-binding C-terminal domain BG04_2542 PF00465 Iron-containing alcohol dehydrogenase BG04_2543 PF00701 Dihydrodipicolinate synthetase family BG04_2544 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BG04_2547 PF13472 GDSL-like Lipase/Acylhydrolase family BG04_2547 PF07859 alpha/beta hydrolase fold BG04_2549 PF17863 AAA lid domain BG04_2549 PF07726 ATPase family associated with various cellular activities (AAA) BG04_2550 PF01882 Protein of unknown function DUF58 BG04_2551 PF13559 Domain of unknown function (DUF4129) BG04_2551 PF01841 Transglutaminase-like superfamily BG04_2551 PF11992 Domain of unknown function (DUF3488) BG04_2552 PF02540 NAD synthase BG04_2552 PF00958 GMP synthase C terminal domain BG04_2552 PF00117 Glutamine amidotransferase class-I BG04_2553 PF00860 Permease family BG04_256 PF13686 DsrE/DsrF/DrsH-like family BG04_2560 PF14044 NETI protein BG04_2561 PF00731 AIR carboxylase BG04_2562 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BG04_2562 PF02222 ATP-grasp domain BG04_2563 PF10397 Adenylosuccinate lyase C-terminus BG04_2563 PF00206 Lyase BG04_2564 PF01259 SAICAR synthetase BG04_2565 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BG04_2567 PF02769 AIR synthase related protein, C-terminal domain BG04_2567 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BG04_2567 PF00586 AIR synthase related protein, N-terminal domain BG04_2568 PF00156 Phosphoribosyl transferase domain BG04_2569 PF02769 AIR synthase related protein, C-terminal domain BG04_2569 PF00586 AIR synthase related protein, N-terminal domain BG04_257 PF01206 Sulfurtransferase TusA BG04_2570 PF00551 Formyl transferase BG04_2571 PF01808 AICARFT/IMPCHase bienzyme BG04_2571 PF02142 MGS-like domain BG04_2572 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BG04_2572 PF02843 Phosphoribosylglycinamide synthetase, C domain BG04_2572 PF02844 Phosphoribosylglycinamide synthetase, N domain BG04_2574 PF01979 Amidohydrolase family BG04_2574 PF13382 Adenine deaminase C-terminal domain BG04_2575 PF01371 Trp repressor protein BG04_2576 PF03129 Anticodon binding domain BG04_2576 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BG04_2577 PF01884 PcrB family BG04_2578 PF00580 UvrD/REP helicase N-terminal domain BG04_2578 PF13361 UvrD-like helicase C-terminal domain BG04_2579 PF12826 Helix-hairpin-helix motif BG04_2579 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BG04_2579 PF00533 BRCA1 C Terminus (BRCT) domain BG04_2579 PF03120 NAD-dependent DNA ligase OB-fold domain BG04_2579 PF01653 NAD-dependent DNA ligase adenylation domain BG04_258 PF02583 Metal-sensitive transcriptional repressor BG04_2580 PF07537 CamS sex pheromone cAM373 precursor BG04_2582 PF02686 Glu-tRNAGln amidotransferase C subunit BG04_2583 PF01425 Amidase BG04_2584 PF02637 GatB domain BG04_2584 PF02934 GatB/GatE catalytic domain BG04_2585 PF00781 Diacylglycerol kinase catalytic domain BG04_2586 PF02475 Met-10+ like-protein BG04_2586 PF01938 TRAM domain BG04_2586 PF05958 tRNA (Uracil-5-)-methyltransferase BG04_2587 PF00082 Subtilase family BG04_2589 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BG04_2589 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BG04_2591 PF12728 Helix-turn-helix domain BG04_2592 PF02608 ABC transporter substrate-binding protein PnrA-like BG04_2593 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_2593 PF00512 His Kinase A (phospho-acceptor) domain BG04_2593 PF00989 PAS fold BG04_2594 PF00557 Metallopeptidase family M24 BG04_2595 PF10282 Lactonase, 7-bladed beta-propeller BG04_2596 PF03060 Nitronate monooxygenase BG04_2597 PF06445 GyrI-like small molecule binding domain BG04_2597 PF13411 MerR HTH family regulatory protein BG04_2598 PF07690 Major Facilitator Superfamily BG04_2600 PF13539 D-alanyl-D-alanine carboxypeptidase BG04_2601 PF00005 ABC transporter BG04_2602 PF00497 Bacterial extracellular solute-binding proteins, family 3 BG04_2603 PF00528 Binding-protein-dependent transport system inner membrane component BG04_2604 PF00528 Binding-protein-dependent transport system inner membrane component BG04_2605 PF00324 Amino acid permease BG04_2606 PF04286 Protein of unknown function (DUF445) BG04_2607 PF03413 Peptidase propeptide and YPEB domain BG04_2608 PF03413 Peptidase propeptide and YPEB domain BG04_2609 PF00672 HAMP domain BG04_2609 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_2609 PF00512 His Kinase A (phospho-acceptor) domain BG04_2610 PF00486 Transcriptional regulatory protein, C terminal BG04_2610 PF00072 Response regulator receiver domain BG04_2611 PF00512 His Kinase A (phospho-acceptor) domain BG04_2611 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_2612 PF00486 Transcriptional regulatory protein, C terminal BG04_2612 PF00072 Response regulator receiver domain BG04_2613 PF04235 Protein of unknown function (DUF418) BG04_2615 PF00005 ABC transporter BG04_2616 PF01569 PAP2 superfamily BG04_2617 PF02566 OsmC-like protein BG04_2618 PF03824 High-affinity nickel-transport protein BG04_2619 PF01546 Peptidase family M20/M25/M40 BG04_2619 PF07687 Peptidase dimerisation domain BG04_2620 PF07681 DoxX BG04_2621 PF01965 DJ-1/PfpI family BG04_2622 PF12867 DinB superfamily BG04_2624 PF01235 Sodium:alanine symporter family BG04_2625 PF06081 Aromatic acid exporter family member 1 BG04_2627 PF02915 Rubrerythrin BG04_2628 PF01544 CorA-like Mg2+ transporter protein BG04_2629 PF17203 Single cache domain 3 BG04_2629 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_2629 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BG04_2629 PF00989 PAS fold BG04_263 PF03466 LysR substrate binding domain BG04_263 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_2630 PF00072 Response regulator receiver domain BG04_2633 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_2633 PF00512 His Kinase A (phospho-acceptor) domain BG04_2633 PF00989 PAS fold BG04_2633 PF08447 PAS fold BG04_2634 PF00271 Helicase conserved C-terminal domain BG04_2634 PF00270 DEAD/DEAH box helicase BG04_2636 PF04740 LXG domain of WXG superfamily BG04_2636 PF14436 Bacterial EndoU nuclease BG04_2638 PF06013 Proteins of 100 residues with WXG BG04_2639 PF08817 WXG100 protein secretion system (Wss), protein YukD BG04_2640 PF10140 WXG100 protein secretion system (Wss), protein YukC BG04_2641 PF01580 FtsK/SpoIIIE family BG04_2641 PF12538 DNA transporter BG04_2643 PF17355 Family of unknown function (DUF5383) BG04_2645 PF04231 Endonuclease I BG04_2646 PF00686 Starch binding domain BG04_2646 PF01373 Glycosyl hydrolase family 14 BG04_2647 PF01625 Peptide methionine sulfoxide reductase BG04_2650 PF00005 ABC transporter BG04_2650 PF12848 ABC transporter BG04_2651 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BG04_2652 PF02898 Nitric oxide synthase, oxygenase domain BG04_2653 PF11121 Protein of unknown function (DUF2639) BG04_2654 PF02082 Transcriptional regulator BG04_2655 PF00970 Oxidoreductase FAD-binding domain BG04_2655 PF00042 Globin BG04_2655 PF00175 Oxidoreductase NAD-binding domain BG04_2656 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BG04_2657 PF01965 DJ-1/PfpI family BG04_2658 PF00188 Cysteine-rich secretory protein family BG04_2659 PF13382 Adenine deaminase C-terminal domain BG04_2659 PF01979 Amidohydrolase family BG04_2660 PF06569 Protein of unknown function (DUF1128) BG04_2661 PF01451 Low molecular weight phosphotyrosine protein phosphatase BG04_2663 PF03631 Virulence factor BrkB BG04_2667 PF01022 Bacterial regulatory protein, arsR family BG04_2668 PF16916 Dimerisation domain of Zinc Transporter BG04_2668 PF01545 Cation efflux family BG04_2669 PF07690 Major Facilitator Superfamily BG04_2670 PF05870 Phenolic acid decarboxylase (PAD) BG04_2674 PF01699 Sodium/calcium exchanger protein BG04_2675 PF14167 YfkD-like protein BG04_2676 PF04055 Radical SAM superfamily BG04_2676 PF08756 YfkB-like domain BG04_2678 PF05681 Fumarate hydratase (Fumerase) BG04_2678 PF05683 Fumarase C-terminus BG04_2679 PF01522 Polysaccharide deacetylase BG04_268 PF07702 UTRA domain BG04_268 PF00392 Bacterial regulatory proteins, gntR family BG04_2680 PF05958 tRNA (Uracil-5-)-methyltransferase BG04_2680 PF01938 TRAM domain BG04_2681 PF00324 Amino acid permease BG04_2682 PF13188 PAS domain BG04_2682 PF00989 PAS fold BG04_2682 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_2682 PF00512 His Kinase A (phospho-acceptor) domain BG04_2682 PF13426 PAS domain BG04_2685 PF01979 Amidohydrolase family BG04_2686 PF01370 NAD dependent epimerase/dehydratase family BG04_2686 PF08338 Domain of unknown function (DUF1731) BG04_2687 PF02631 RecX family BG04_2688 PF00106 short chain dehydrogenase BG04_2689 PF08838 Protein of unknown function (DUF1811) BG04_269 PF02378 Phosphotransferase system, EIIC BG04_269 PF00367 phosphotransferase system, EIIB BG04_269 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BG04_2690 PF08176 Small acid-soluble spore protein K family BG04_2692 PF04307 LexA-binding, inner membrane-associated putative hydrolase BG04_2693 PF14815 NUDIX domain BG04_2693 PF00730 HhH-GPD superfamily base excision DNA repair protein BG04_2696 PF04259 Small, acid-soluble spore protein, gamma-type BG04_2697 PF14182 YgaB-like protein BG04_2698 PF04167 Protein of unknown function (DUF402) BG04_2699 PF00005 ABC transporter BG04_2699 PF00664 ABC transporter transmembrane region BG04_27 PF13302 Acetyltransferase (GNAT) domain BG04_270 PF00232 Glycosyl hydrolase family 1 BG04_2700 PF06081 Aromatic acid exporter family member 1 BG04_2701 PF00202 Aminotransferase class-III BG04_2702 PF00005 ABC transporter BG04_2705 PF07885 Ion channel BG04_2706 PF00578 AhpC/TSA family BG04_2707 PF01475 Ferric uptake regulator family BG04_2708 PF11023 Zinc-ribbon containing domain BG04_2709 PF18576 Helix-turn-helix domain BG04_2709 PF14540 Nucleotidyltransferase-like BG04_272 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BG04_273 PF05901 Excalibur calcium-binding domain BG04_2731 PF08331 Domain of unknown function (DUF1730) BG04_2732 PF12671 Putative amidase domain BG04_2733 PF00588 SpoU rRNA Methylase family BG04_2735 PF06798 PrkA serine protein kinase C-terminal domain BG04_2735 PF08298 PrkA AAA domain BG04_2736 PF04285 Protein of unknown function (DUF444) BG04_2738 PF01545 Cation efflux family BG04_2738 PF16916 Dimerisation domain of Zinc Transporter BG04_2741 PF13667 ThiC-associated domain BG04_2741 PF01964 Radical SAM ThiC family BG04_2743 PF02673 Bacitracin resistance protein BacA BG04_2744 PF00375 Sodium:dicarboxylate symporter family BG04_2746 PF09335 SNARE associated Golgi protein BG04_2747 PF12787 EcsC protein family BG04_2748 PF00324 Amino acid permease BG04_2750 PF16874 Glycosyl hydrolase family 36 C-terminal domain BG04_2750 PF16875 Glycosyl hydrolase family 36 N-terminal domain BG04_2752 PF04309 Glycerol-3-phosphate responsive antiterminator BG04_2754 PF00528 Binding-protein-dependent transport system inner membrane component BG04_2755 PF00528 Binding-protein-dependent transport system inner membrane component BG04_2756 PF13416 Bacterial extracellular solute-binding protein BG04_2757 PF03009 Glycerophosphoryl diester phosphodiesterase family BG04_276 PF01810 LysE type translocator BG04_2760 PF13378 Enolase C-terminal domain-like BG04_2760 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BG04_2761 PF00877 NlpC/P60 family BG04_2761 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain BG04_2768 PF10503 Esterase PHB depolymerase BG04_2769 PF03990 G5-linked-Ubiquitin-like domain BG04_2769 PF07501 G5 domain BG04_2769 PF06725 3D domain BG04_277 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BG04_2770 PF02557 D-alanyl-D-alanine carboxypeptidase BG04_2772 PF08239 Bacterial SH3 domain BG04_2774 PF00583 Acetyltransferase (GNAT) family BG04_2775 PF13396 Phospholipase_D-nuclease N-terminal BG04_2775 PF13091 PLD-like domain BG04_2778 PF00269 Small, acid-soluble spore proteins, alpha/beta type BG04_2780 PF00356 Bacterial regulatory proteins, lacI family BG04_2781 PF07690 Major Facilitator Superfamily BG04_2782 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BG04_2782 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BG04_2783 PF00294 pfkB family carbohydrate kinase BG04_2784 PF00171 Aldehyde dehydrogenase family BG04_2785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BG04_2785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BG04_2785 PF00205 Thiamine pyrophosphate enzyme, central domain BG04_2786 PF01261 Xylose isomerase-like TIM barrel BG04_2787 PF00356 Bacterial regulatory proteins, lacI family BG04_2788 PF04962 KduI/IolB family BG04_279 PF03466 LysR substrate binding domain BG04_279 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_2791 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BG04_2791 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BG04_2792 PF01037 Lrp/AsnC ligand binding domain BG04_2796 PF07690 Major Facilitator Superfamily BG04_2797 PF01479 S4 domain BG04_2797 PF00849 RNA pseudouridylate synthase BG04_280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG04_2800 PF14552 Tautomerase enzyme BG04_2801 PF00091 Tubulin/FtsZ family, GTPase domain BG04_2801 PF12327 FtsZ family, C-terminal domain BG04_2802 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG04_2804 PF03600 Citrate transporter BG04_2805 PF10787 Uncharacterised protein from bacillus cereus group BG04_2807 PF01026 TatD related DNase BG04_2809 PF01594 AI-2E family transporter BG04_2812 PF08240 Alcohol dehydrogenase GroES-like domain BG04_2812 PF00107 Zinc-binding dehydrogenase BG04_2813 PF02652 L-lactate permease BG04_2814 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BG04_2814 PF00056 lactate/malate dehydrogenase, NAD binding domain BG04_2815 PF16916 Dimerisation domain of Zinc Transporter BG04_2815 PF01545 Cation efflux family BG04_2816 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG04_2816 PF00672 HAMP domain BG04_2816 PF02743 Cache domain BG04_2817 PF01479 S4 domain BG04_2817 PF00849 RNA pseudouridylate synthase BG04_282 PF08448 PAS fold BG04_282 PF00990 Diguanylate cyclase, GGDEF domain BG04_2820 PF17969 L,D-transpeptidase C-terminal domain BG04_2820 PF03734 L,D-transpeptidase catalytic domain BG04_2821 PF00795 Carbon-nitrogen hydrolase BG04_2821 PF00583 Acetyltransferase (GNAT) family BG04_2822 PF04309 Glycerol-3-phosphate responsive antiterminator BG04_2823 PF00230 Major intrinsic protein BG04_2824 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BG04_2824 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BG04_2825 PF01266 FAD dependent oxidoreductase BG04_2825 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BG04_2826 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BG04_2826 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BG04_2826 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BG04_2826 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BG04_2827 PF02632 BioY family BG04_2828 PF14148 YhdB-like protein BG04_2829 PF04293 SpoVR like protein BG04_283 PF12706 Beta-lactamase superfamily domain BG04_2831 PF02082 Transcriptional regulator BG04_2832 PF08240 Alcohol dehydrogenase GroES-like domain BG04_2832 PF00107 Zinc-binding dehydrogenase BG04_2834 PF00005 ABC transporter BG04_2835 PF00528 Binding-protein-dependent transport system inner membrane component BG04_2836 PF00497 Bacterial extracellular solute-binding proteins, family 3 BG04_2837 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BG04_2838 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BG04_284 PF13170 Protein of unknown function (DUF4003) BG04_2840 PF02581 Thiamine monophosphate synthase BG04_2841 PF01266 FAD dependent oxidoreductase BG04_2843 PF05690 Thiazole biosynthesis protein ThiG BG04_2844 PF00899 ThiF family BG04_2845 PF08543 Phosphomethylpyrimidine kinase BG04_2846 PF00300 Histidine phosphatase superfamily (branch 1) BG04_2848 PF13460 NAD(P)H-binding BG04_2849 PF03471 Transporter associated domain BG04_2849 PF01595 Cyclin M transmembrane N-terminal domain BG04_2849 PF00571 CBS domain BG04_2850 PF00269 Small, acid-soluble spore proteins, alpha/beta type BG04_2852 PF00005 ABC transporter BG04_2852 PF17912 MalK OB fold domain BG04_2852 PF03459 TOBE domain BG04_2853 PF13556 PucR C-terminal helix-turn-helix domain BG04_2856 PF14398 YheC/D like ATP-grasp BG04_2857 PF14398 YheC/D like ATP-grasp BG04_2859 PF06133 Control of competence regulator ComK, YlbF/YmcA BG04_286 PF00881 Nitroreductase family BG04_2861 PF04055 Radical SAM superfamily BG04_2862 PF13193 AMP-binding enzyme C-terminal domain BG04_2862 PF00501 AMP-binding enzyme BG04_2863 PF00378 Enoyl-CoA hydratase/isomerase BG04_2864 PF00216 Bacterial DNA-binding protein BG04_2866 PF13732 Domain of unknown function (DUF4162) BG04_2866 PF00005 ABC transporter BG04_2868 PF01336 OB-fold nucleic acid binding domain BG04_2868 PF01966 HD domain BG04_2869 PF14147 Sporulation protein YhaL BG04_287 PF00171 Aldehyde dehydrogenase family BG04_2870 PF05698 Bacterial trigger factor protein (TF) C-terminus BG04_2874 PF01047 MarR family BG04_2876 PF17099 Tryptophan transporter TrpP BG04_2877 PF00266 Aminotransferase class-V BG04_2878 PF03551 Transcriptional regulator PadR-like family BG04_2878 PF10400 Virulence activator alpha C-term BG04_2879 PF13673 Acetyltransferase (GNAT) domain BG04_2880 PF01757 Acyltransferase family BG04_2881 PF01230 HIT domain BG04_2882 PF00005 ABC transporter BG04_2883 PF05975 Bacterial ABC transporter protein EcsB BG04_2884 PF12787 EcsC protein family BG04_2885 PF07687 Peptidase dimerisation domain BG04_2885 PF01546 Peptidase family M20/M25/M40 BG04_2886 PF01569 PAP2 superfamily BG04_2888 PF03992 Antibiotic biosynthesis monooxygenase BG04_2889 PF00912 Transglycosylase BG04_2889 PF00905 Penicillin binding protein transpeptidase domain BG04_2890 PF01208 Uroporphyrinogen decarboxylase (URO-D) BG04_2893 PF17932 Tetracyclin repressor-like, C-terminal domain BG04_2893 PF00440 Bacterial regulatory proteins, tetR family BG04_2895 PF01547 Bacterial extracellular solute-binding protein BG04_2896 PF02743 Cache domain BG04_2896 PF06580 Histidine kinase BG04_2896 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_2896 PF00672 HAMP domain BG04_2899 PF12706 Beta-lactamase superfamily domain BG04_290 PF04011 LemA family BG04_2900 PF10437 Bacterial lipoate protein ligase C-terminus BG04_2900 PF03099 Biotin/lipoate A/B protein ligase family BG04_2901 PF13193 AMP-binding enzyme C-terminal domain BG04_2901 PF00501 AMP-binding enzyme BG04_2902 PF00378 Enoyl-CoA hydratase/isomerase BG04_291 PF01522 Polysaccharide deacetylase BG04_291 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BG04_292 PF00535 Glycosyl transferase family 2 BG04_292 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 BG04_2925 PF01435 Peptidase family M48 BG04_2925 PF16491 CAAX prenyl protease N-terminal, five membrane helices BG04_2926 PF00463 Isocitrate lyase family BG04_2927 PF08858 IDEAL domain BG04_2928 PF07676 WD40-like Beta Propeller Repeat BG04_2928 PF00326 Prolyl oligopeptidase family BG04_2929 PF09335 SNARE associated Golgi protein BG04_2931 PF12705 PD-(D/E)XK nuclease superfamily BG04_2932 PF00580 UvrD/REP helicase N-terminal domain BG04_2932 PF13361 UvrD-like helicase C-terminal domain BG04_2932 PF12705 PD-(D/E)XK nuclease superfamily BG04_2933 PF00149 Calcineurin-like phosphoesterase BG04_2933 PF12320 Type 5 capsule protein repressor C-terminal domain BG04_2934 PF13476 AAA domain BG04_2936 PF10676 Spore germination protein gerPA/gerPF BG04_2939 PF10737 Spore germination protein GerPC BG04_294 PF01638 HxlR-like helix-turn-helix BG04_2940 PF10803 Spore germination GerPB BG04_2941 PF10676 Spore germination protein gerPA/gerPF BG04_2942 PF04235 Protein of unknown function (DUF418) BG04_2943 PF07457 Protein of unknown function (DUF1516) BG04_2945 PF13537 Glutamine amidotransferase domain BG04_2945 PF00733 Asparagine synthase BG04_2946 PF01593 Flavin containing amine oxidoreductase BG04_2949 PF01373 Glycosyl hydrolase family 14 BG04_2949 PF03423 Carbohydrate binding domain (family 25) BG04_2949 PF00128 Alpha amylase, catalytic domain BG04_295 PF02525 Flavodoxin-like fold BG04_2950 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BG04_2950 PF00356 Bacterial regulatory proteins, lacI family BG04_2951 PF00171 Aldehyde dehydrogenase family BG04_2952 PF00202 Aminotransferase class-III BG04_2953 PF01546 Peptidase family M20/M25/M40 BG04_2954 PF00324 Amino acid permease BG04_2955 PF02954 Bacterial regulatory protein, Fis family BG04_2955 PF13426 PAS domain BG04_2955 PF00158 Sigma-54 interaction domain BG04_2957 PF04461 Protein of unknown function (DUF520) BG04_2958 PF17783 CvfB-like winged helix domain BG04_2958 PF13509 S1 domain BG04_2959 PF02645 Uncharacterised protein, DegV family COG1307 BG04_296 PF02525 Flavodoxin-like fold BG04_2960 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BG04_2960 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BG04_2964 PF01883 Iron-sulfur cluster assembly protein BG04_2965 PF00027 Cyclic nucleotide-binding domain BG04_2965 PF00325 Bacterial regulatory proteins, crp family BG04_2966 PF02774 Semialdehyde dehydrogenase, dimerisation domain BG04_2966 PF01118 Semialdehyde dehydrogenase, NAD binding domain BG04_2967 PF01960 ArgJ family BG04_2968 PF00696 Amino acid kinase family BG04_2969 PF00202 Aminotransferase class-III BG04_297 PF13302 Acetyltransferase (GNAT) domain BG04_2970 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BG04_2970 PF00117 Glutamine amidotransferase class-I BG04_2971 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BG04_2971 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BG04_2972 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BG04_2972 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BG04_2974 PF14168 YjzC-like protein BG04_2975 PF10431 C-terminal, D2-small domain, of ClpB protein BG04_2975 PF02861 Clp amino terminal domain, pathogenicity island component BG04_2975 PF07724 AAA domain (Cdc48 subfamily) BG04_2975 PF17871 AAA lid domain BG04_2975 PF00004 ATPase family associated with various cellular activities (AAA) BG04_2977 PF12833 Helix-turn-helix domain BG04_2978 PF10509 Galactokinase galactose-binding signature BG04_2978 PF08544 GHMP kinases C terminal BG04_2978 PF00288 GHMP kinases N terminal domain BG04_2979 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BG04_2979 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BG04_2980 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BG04_2980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BG04_2984 PF10815 ComZ BG04_2986 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BG04_2986 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BG04_2987 PF00109 Beta-ketoacyl synthase, N-terminal domain BG04_2987 PF02801 Beta-ketoacyl synthase, C-terminal domain BG04_2988 PF10026 Predicted Zn-dependent protease (DUF2268) BG04_2989 PF00005 ABC transporter BG04_2989 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG04_2990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG04_2990 PF00005 ABC transporter BG04_2991 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG04_2992 PF00528 Binding-protein-dependent transport system inner membrane component BG04_2993 PF00528 Binding-protein-dependent transport system inner membrane component BG04_2994 PF12227 Protein of unknown function (DUF3603) BG04_2995 PF00579 tRNA synthetases class I (W and Y) BG04_2996 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG04_2997 PF00528 Binding-protein-dependent transport system inner membrane component BG04_2998 PF00528 Binding-protein-dependent transport system inner membrane component BG04_2998 PF12911 N-terminal TM domain of oligopeptide transport permease C BG04_2999 PF00005 ABC transporter BG04_2999 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG04_30 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BG04_30 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BG04_300 PF00264 Common central domain of tyrosinase BG04_3000 PF00005 ABC transporter BG04_3000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG04_3001 PF13508 Acetyltransferase (GNAT) domain BG04_3002 PF00324 Amino acid permease BG04_3003 PF13520 Amino acid permease BG04_3004 PF03960 ArsC family BG04_3005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_3005 PF03466 LysR substrate binding domain BG04_3008 PF03741 Integral membrane protein TerC family BG04_3009 PF05389 Negative regulator of genetic competence (MecA) BG04_3010 PF13396 Phospholipase_D-nuclease N-terminal BG04_3010 PF13091 PLD-like domain BG04_3012 PF01432 Peptidase family M3 BG04_3012 PF08439 Oligopeptidase F BG04_3015 PF01152 Bacterial-like globin BG04_3016 PF01464 Transglycosylase SLT domain BG04_3017 PF01928 CYTH domain BG04_3019 PF04607 Region found in RelA / SpoT proteins BG04_302 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG04_3020 PF01513 ATP-NAD kinase BG04_3021 PF00849 RNA pseudouridylate synthase BG04_3022 PF00149 Calcineurin-like phosphoesterase BG04_3023 PF01769 Divalent cation transporter BG04_3023 PF00571 CBS domain BG04_3023 PF03448 MgtE intracellular N domain BG04_3024 PF00999 Sodium/hydrogen exchanger family BG04_3024 PF02080 TrkA-C domain BG04_3024 PF02254 TrkA-N domain BG04_3026 PF07098 Protein of unknown function (DUF1360) BG04_303 PF04299 Putative FMN-binding domain BG04_3033 PF14069 Stage VI sporulation protein F BG04_3035 PF00580 UvrD/REP helicase N-terminal domain BG04_3035 PF13361 UvrD-like helicase C-terminal domain BG04_3037 PF04239 Protein of unknown function (DUF421) BG04_3038 PF13673 Acetyltransferase (GNAT) domain BG04_3040 PF00756 Putative esterase BG04_3042 PF04608 Phosphatidylglycerophosphatase A BG04_3044 PF01380 SIS domain BG04_3044 PF01418 Helix-turn-helix domain, rpiR family BG04_3045 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BG04_3045 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BG04_3046 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BG04_3046 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BG04_3047 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BG04_3048 PF02447 GntP family permease BG04_3051 PF01037 Lrp/AsnC ligand binding domain BG04_3052 PF00797 N-acetyltransferase BG04_3053 PF01323 DSBA-like thioredoxin domain BG04_3055 PF00271 Helicase conserved C-terminal domain BG04_3055 PF03880 DbpA RNA binding domain BG04_3055 PF00270 DEAD/DEAH box helicase BG04_3056 PF03932 CutC family BG04_3057 PF00324 Amino acid permease BG04_3059 PF00753 Metallo-beta-lactamase superfamily BG04_3060 PF00440 Bacterial regulatory proteins, tetR family BG04_3060 PF13305 Tetracyclin repressor-like, C-terminal domain BG04_3061 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BG04_3061 PF00874 PRD domain BG04_3061 PF05043 Mga helix-turn-helix domain BG04_3061 PF08279 HTH domain BG04_3062 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BG04_3063 PF02378 Phosphotransferase system, EIIC BG04_3064 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BG04_3065 PF02056 Family 4 glycosyl hydrolase BG04_3065 PF11975 Family 4 glycosyl hydrolase C-terminal domain BG04_3066 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_3066 PF07694 5TMR of 5TMR-LYT BG04_3066 PF06580 Histidine kinase BG04_3066 PF13492 GAF domain BG04_3067 PF00072 Response regulator receiver domain BG04_3067 PF04397 LytTr DNA-binding domain BG04_3068 PF03788 LrgA family BG04_3069 PF04172 LrgB-like family BG04_307 PF00561 alpha/beta hydrolase fold BG04_3071 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG04_3071 PF04324 BFD-like [2Fe-2S] binding domain BG04_3071 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BG04_3071 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BG04_3071 PF18267 Rubredoxin NAD+ reductase C-terminal domain BG04_3072 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BG04_3072 PF00384 Molybdopterin oxidoreductase BG04_3072 PF01568 Molydopterin dinucleotide binding domain BG04_3073 PF07690 Major Facilitator Superfamily BG04_3074 PF17284 Spermidine synthase tetramerisation domain BG04_3077 PF01225 Mur ligase family, catalytic domain BG04_3077 PF02875 Mur ligase family, glutamate ligase domain BG04_3077 PF08245 Mur ligase middle domain BG04_3079 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BG04_3079 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BG04_3081 PF00293 NUDIX domain BG04_3081 PF13344 Haloacid dehalogenase-like hydrolase BG04_3082 PF03306 Alpha-acetolactate decarboxylase BG04_3083 PF00205 Thiamine pyrophosphate enzyme, central domain BG04_3083 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BG04_3083 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BG04_3085 PF09962 Uncharacterized conserved protein (DUF2196) BG04_3087 PF01638 HxlR-like helix-turn-helix BG04_3088 PF07690 Major Facilitator Superfamily BG04_3089 PF00296 Luciferase-like monooxygenase BG04_3090 PF00698 Acyl transferase domain BG04_3091 PF16957 Malonate decarboxylase, alpha subunit, transporter BG04_3092 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BG04_3093 PF06857 Malonate decarboxylase delta subunit (MdcD) BG04_3094 PF01039 Carboxyl transferase domain BG04_3095 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BG04_3096 PF00072 Response regulator receiver domain BG04_3096 PF08664 YcbB domain BG04_3097 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_3098 PF04960 Glutaminase BG04_3099 PF01235 Sodium:alanine symporter family BG04_31 PF00258 Flavodoxin BG04_31 PF00667 FAD binding domain BG04_31 PF00175 Oxidoreductase NAD-binding domain BG04_310 PF07308 Protein of unknown function (DUF1456) BG04_3100 PF00474 Sodium:solute symporter family BG04_3103 PF13520 Amino acid permease BG04_3105 PF03061 Thioesterase superfamily BG04_3106 PF00311 Phosphoenolpyruvate carboxylase BG04_3108 PF00355 Rieske [2Fe-2S] domain BG04_3109 PF03649 Uncharacterised protein family (UPF0014) BG04_3110 PF00005 ABC transporter BG04_3111 PF01053 Cys/Met metabolism PLP-dependent enzyme BG04_3112 PF04893 Yip1 domain BG04_3113 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BG04_3114 PF00005 ABC transporter BG04_3115 PF12704 MacB-like periplasmic core domain BG04_3115 PF02687 FtsX-like permease family BG04_3117 PF00809 Pterin binding enzyme BG04_312 PF06874 Firmicute fructose-1,6-bisphosphatase BG04_3120 PF07662 Na+ dependent nucleoside transporter C-terminus BG04_3120 PF01773 Na+ dependent nucleoside transporter N-terminus BG04_3121 PF00324 Amino acid permease BG04_3122 PF02632 BioY family BG04_3124 PF00202 Aminotransferase class-III BG04_3126 PF03741 Integral membrane protein TerC family BG04_3127 PF00375 Sodium:dicarboxylate symporter family BG04_3128 PF03480 Bacterial extracellular solute-binding protein, family 7 BG04_3129 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BG04_3129 PF17203 Single cache domain 3 BG04_3129 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_313 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BG04_313 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BG04_3130 PF04703 FaeA-like protein BG04_3130 PF00072 Response regulator receiver domain BG04_3131 PF06800 Sugar transport protein BG04_3137 PF01381 Helix-turn-helix BG04_3139 PF00884 Sulfatase BG04_314 PF00313 'Cold-shock' DNA-binding domain BG04_3142 PF00392 Bacterial regulatory proteins, gntR family BG04_3142 PF00155 Aminotransferase class I and II BG04_3143 PF02574 Homocysteine S-methyltransferase BG04_3144 PF01557 Fumarylacetoacetate (FAA) hydrolase family BG04_3147 PF03600 Citrate transporter BG04_3148 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_3148 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BG04_3149 PF08279 HTH domain BG04_3149 PF00072 Response regulator receiver domain BG04_3149 PF12431 Transcriptional regulator BG04_3150 PF03401 Tripartite tricarboxylate transporter family receptor BG04_3151 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_3151 PF03466 LysR substrate binding domain BG04_3152 PF05145 Transition state regulatory protein AbrB BG04_3153 PF08241 Methyltransferase domain BG04_3154 PF00528 Binding-protein-dependent transport system inner membrane component BG04_3155 PF00005 ABC transporter BG04_3155 PF00571 CBS domain BG04_3156 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BG04_3157 PF17934 Tetracyclin repressor-like, C-terminal domain BG04_3157 PF00440 Bacterial regulatory proteins, tetR family BG04_3159 PF00202 Aminotransferase class-III BG04_316 PF00313 'Cold-shock' DNA-binding domain BG04_3160 PF00491 Arginase family BG04_3161 PF00324 Amino acid permease BG04_3162 PF13419 Haloacid dehalogenase-like hydrolase BG04_3163 PF00296 Luciferase-like monooxygenase BG04_3164 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BG04_3164 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BG04_3165 PF00296 Luciferase-like monooxygenase BG04_3166 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BG04_3166 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BG04_3167 PF01497 Periplasmic binding protein BG04_3168 PF01032 FecCD transport family BG04_317 PF07690 Major Facilitator Superfamily BG04_3170 PF01032 FecCD transport family BG04_3172 PF06827 Zinc finger found in FPG and IleRS BG04_3172 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BG04_3172 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BG04_3175 PF01380 SIS domain BG04_3176 PF01380 SIS domain BG04_3176 PF01418 Helix-turn-helix domain, rpiR family BG04_3177 PF00367 phosphotransferase system, EIIB BG04_3177 PF02378 Phosphotransferase system, EIIC BG04_3179 PF07687 Peptidase dimerisation domain BG04_3179 PF01546 Peptidase family M20/M25/M40 BG04_318 PF00291 Pyridoxal-phosphate dependent enzyme BG04_3180 PF03070 TENA/THI-4/PQQC family BG04_3181 PF00005 ABC transporter BG04_3182 PF00528 Binding-protein-dependent transport system inner membrane component BG04_3183 PF09084 NMT1/THI5 like BG04_3185 PF01380 SIS domain BG04_3186 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BG04_3187 PF01638 HxlR-like helix-turn-helix BG04_3191 PF07670 Nucleoside recognition BG04_3191 PF02421 Ferrous iron transport protein B BG04_3191 PF17910 FeoB cytosolic helical domain BG04_3191 PF07664 Ferrous iron transport protein B C terminus BG04_3196 PF04552 Sigma-54, DNA binding domain BG04_3196 PF00309 Sigma-54 factor, Activator interacting domain (AID) BG04_3196 PF04963 Sigma-54 factor, core binding domain BG04_3197 PF01638 HxlR-like helix-turn-helix BG04_3198 PF00698 Acyl transferase domain BG04_3198 PF08240 Alcohol dehydrogenase GroES-like domain BG04_3198 PF16197 Ketoacyl-synthetase C-terminal extension BG04_3198 PF00109 Beta-ketoacyl synthase, N-terminal domain BG04_3198 PF02801 Beta-ketoacyl synthase, C-terminal domain BG04_3198 PF08659 KR domain BG04_3198 PF00550 Phosphopantetheine attachment site BG04_3198 PF14765 Polyketide synthase dehydratase BG04_3199 PF00005 ABC transporter BG04_3199 PF00664 ABC transporter transmembrane region BG04_320 PF07690 Major Facilitator Superfamily BG04_3200 PF00005 ABC transporter BG04_3200 PF00664 ABC transporter transmembrane region BG04_3202 PF00474 Sodium:solute symporter family BG04_3203 PF04341 Protein of unknown function, DUF485 BG04_3205 PF09339 IclR helix-turn-helix domain BG04_3205 PF01614 Bacterial transcriptional regulator BG04_3206 PF00248 Aldo/keto reductase family BG04_3207 PF00106 short chain dehydrogenase BG04_3208 PF01047 MarR family BG04_3210 PF07690 Major Facilitator Superfamily BG04_3211 PF03358 NADPH-dependent FMN reductase BG04_3214 PF00356 Bacterial regulatory proteins, lacI family BG04_3215 PF00294 pfkB family carbohydrate kinase BG04_3216 PF05025 RbsD / FucU transport protein family BG04_3217 PF00005 ABC transporter BG04_3218 PF02653 Branched-chain amino acid transport system / permease component BG04_3219 PF13407 Periplasmic binding protein domain BG04_3220 PF07501 G5 domain BG04_3220 PF03990 G5-linked-Ubiquitin-like domain BG04_3220 PF06725 3D domain BG04_3221 PF01613 Flavin reductase like domain BG04_3222 PF01547 Bacterial extracellular solute-binding protein BG04_3223 PF00528 Binding-protein-dependent transport system inner membrane component BG04_3224 PF00528 Binding-protein-dependent transport system inner membrane component BG04_3227 PF00072 Response regulator receiver domain BG04_3227 PF00990 Diguanylate cyclase, GGDEF domain BG04_3229 PF00535 Glycosyl transferase family 2 BG04_3231 PF00486 Transcriptional regulatory protein, C terminal BG04_3231 PF00072 Response regulator receiver domain BG04_3232 PF00672 HAMP domain BG04_3232 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_3232 PF00512 His Kinase A (phospho-acceptor) domain BG04_3232 PF13426 PAS domain BG04_3233 PF09350 Domain of unknown function (DUF1992) BG04_3235 PF00300 Histidine phosphatase superfamily (branch 1) BG04_3240 PF01979 Amidohydrolase family BG04_3241 PF00860 Permease family BG04_3243 PF01202 Shikimate kinase BG04_3244 PF00171 Aldehyde dehydrogenase family BG04_3245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BG04_3245 PF00205 Thiamine pyrophosphate enzyme, central domain BG04_3245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BG04_3246 PF01487 Type I 3-dehydroquinase BG04_3247 PF13113 Protein of unknown function (DUF3970) BG04_3248 PF00367 phosphotransferase system, EIIB BG04_3248 PF02378 Phosphotransferase system, EIIC BG04_3249 PF16657 Maltogenic Amylase, C-terminal domain BG04_3249 PF00128 Alpha amylase, catalytic domain BG04_325 PF02126 Phosphotriesterase family BG04_3250 PF00392 Bacterial regulatory proteins, gntR family BG04_3250 PF07702 UTRA domain BG04_3251 PF02682 Carboxyltransferase domain, subdomain C and D BG04_3252 PF02626 Carboxyltransferase domain, subdomain A and B BG04_3253 PF03746 LamB/YcsF family BG04_3254 PF01566 Natural resistance-associated macrophage protein BG04_3255 PF03006 Haemolysin-III related BG04_3258 PF00881 Nitroreductase family BG04_3259 PF01594 AI-2E family transporter BG04_326 PF01740 STAS domain BG04_326 PF00916 Sulfate permease family BG04_3261 PF00107 Zinc-binding dehydrogenase BG04_3261 PF08240 Alcohol dehydrogenase GroES-like domain BG04_3263 PF08501 Shikimate dehydrogenase substrate binding domain BG04_3263 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BG04_3264 PF07690 Major Facilitator Superfamily BG04_3265 PF02515 CoA-transferase family III BG04_3266 PF00682 HMGL-like BG04_3267 PF00171 Aldehyde dehydrogenase family BG04_3269 PF01425 Amidase BG04_3270 PF02785 Biotin carboxylase C-terminal domain BG04_3270 PF00289 Biotin carboxylase, N-terminal domain BG04_3270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BG04_3273 PF00324 Amino acid permease BG04_3274 PF07969 Amidohydrolase family BG04_3275 PF00313 'Cold-shock' DNA-binding domain BG04_3276 PF13460 NAD(P)H-binding BG04_3277 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BG04_3277 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BG04_3278 PF10417 C-terminal domain of 1-Cys peroxiredoxin BG04_3278 PF00578 AhpC/TSA family BG04_3279 PF00578 AhpC/TSA family BG04_3283 PF00563 EAL domain BG04_3283 PF01590 GAF domain BG04_3283 PF00990 Diguanylate cyclase, GGDEF domain BG04_3283 PF00360 Phytochrome region BG04_3284 PF02416 mttA/Hcf106 family BG04_3285 PF00893 Small Multidrug Resistance protein BG04_3286 PF00893 Small Multidrug Resistance protein BG04_3289 PF08245 Mur ligase middle domain BG04_3290 PF14102 Capsule biosynthesis CapC BG04_3291 PF09587 Bacterial capsule synthesis protein PGA_cap BG04_3297 PF13419 Haloacid dehalogenase-like hydrolase BG04_3300 PF02638 Glycosyl hydrolase-like 10 BG04_3301 PF01418 Helix-turn-helix domain, rpiR family BG04_3301 PF01380 SIS domain BG04_3303 PF02378 Phosphotransferase system, EIIC BG04_3305 PF02056 Family 4 glycosyl hydrolase BG04_3305 PF11975 Family 4 glycosyl hydrolase C-terminal domain BG04_3306 PF03702 Anhydro-N-acetylmuramic acid kinase BG04_3307 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BG04_3309 PF01869 BadF/BadG/BcrA/BcrD ATPase family BG04_3310 PF01380 SIS domain BG04_3311 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BG04_3313 PF03611 PTS system sugar-specific permease component BG04_3316 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BG04_3319 PF03734 L,D-transpeptidase catalytic domain BG04_3320 PF13649 Methyltransferase domain BG04_3321 PF03466 LysR substrate binding domain BG04_3321 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_3323 PF00248 Aldo/keto reductase family BG04_3326 PF01425 Amidase BG04_3328 PF16363 GDP-mannose 4,6 dehydratase BG04_333 PF00101 Ribulose bisphosphate carboxylase, small chain BG04_3334 PF00672 HAMP domain BG04_3334 PF17154 Gammaproteobacterial periplasmic sensor domain BG04_3334 PF00563 EAL domain BG04_3334 PF00990 Diguanylate cyclase, GGDEF domain BG04_3335 PF03707 Bacterial signalling protein N terminal repeat BG04_3335 PF00990 Diguanylate cyclase, GGDEF domain BG04_3335 PF00563 EAL domain BG04_3336 PF01638 HxlR-like helix-turn-helix BG04_3337 PF06800 Sugar transport protein BG04_3339 PF01758 Sodium Bile acid symporter family BG04_3340 PF11755 Protein of unknown function (DUF3311) BG04_3341 PF00474 Sodium:solute symporter family BG04_3343 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_3344 PF08664 YcbB domain BG04_3344 PF00072 Response regulator receiver domain BG04_3345 PF00375 Sodium:dicarboxylate symporter family BG04_3347 PF01476 LysM domain BG04_3347 PF00877 NlpC/P60 family BG04_3349 PF08486 Stage II sporulation protein BG04_3350 PF00248 Aldo/keto reductase family BG04_3352 PF08864 UPF0302 domain BG04_3352 PF08858 IDEAL domain BG04_3353 PF02040 Arsenical pump membrane protein BG04_3354 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BG04_3354 PF13378 Enolase C-terminal domain-like BG04_3357 PF00158 Sigma-54 interaction domain BG04_3361 PF07690 Major Facilitator Superfamily BG04_3362 PF00873 AcrB/AcrD/AcrF family BG04_3364 PF01022 Bacterial regulatory protein, arsR family BG04_3365 PF13630 SdpI/YhfL protein family BG04_3365 PF07853 Protein of unknown function (DUF1648) BG04_3369 PF00563 EAL domain BG04_3369 PF03707 Bacterial signalling protein N terminal repeat BG04_3369 PF00990 Diguanylate cyclase, GGDEF domain BG04_3370 PF01227 GTP cyclohydrolase I BG04_3371 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG04_3371 PF13192 Thioredoxin domain BG04_3373 PF03707 Bacterial signalling protein N terminal repeat BG04_3373 PF00990 Diguanylate cyclase, GGDEF domain BG04_3373 PF00563 EAL domain BG04_3376 PF00669 Bacterial flagellin N-terminal helical region BG04_3376 PF00700 Bacterial flagellin C-terminal helical region BG04_3379 PF01470 Pyroglutamyl peptidase BG04_338 PF05139 Erythromycin esterase BG04_3393 PF08671 Anti-repressor SinI BG04_3393 PF01381 Helix-turn-helix BG04_3397 PF02397 Bacterial sugar transferase BG04_3398 PF01370 NAD dependent epimerase/dehydratase family BG04_34 PF07690 Major Facilitator Superfamily BG04_3401 PF00535 Glycosyl transferase family 2 BG04_3402 PF13439 Glycosyltransferase Family 4 BG04_3402 PF00534 Glycosyl transferases group 1 BG04_341 PF03992 Antibiotic biosynthesis monooxygenase BG04_3410 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BG04_3410 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BG04_3410 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BG04_3411 PF01061 ABC-2 type transporter BG04_3412 PF00005 ABC transporter BG04_3416 PF00483 Nucleotidyl transferase BG04_3417 PF02397 Bacterial sugar transferase BG04_3418 PF01370 NAD dependent epimerase/dehydratase family BG04_3419 PF16363 GDP-mannose 4,6 dehydratase BG04_342 PF16736 Single Cache-like BG04_342 PF00989 PAS fold BG04_342 PF00512 His Kinase A (phospho-acceptor) domain BG04_342 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_3421 PF00132 Bacterial transferase hexapeptide (six repeats) BG04_3423 PF00535 Glycosyl transferase family 2 BG04_3425 PF00535 Glycosyl transferase family 2 BG04_3426 PF00132 Bacterial transferase hexapeptide (six repeats) BG04_343 PF00072 Response regulator receiver domain BG04_343 PF00486 Transcriptional regulatory protein, C terminal BG04_3430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BG04_3430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BG04_3430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BG04_3431 PF00483 Nucleotidyl transferase BG04_3431 PF01050 Mannose-6-phosphate isomerase BG04_3433 PF01238 Phosphomannose isomerase type I BG04_3434 PF13807 G-rich domain on putative tyrosine kinase BG04_3434 PF02706 Chain length determinant protein BG04_3435 PF13614 AAA domain BG04_3438 PF02350 UDP-N-acetylglucosamine 2-epimerase BG04_3439 PF00483 Nucleotidyl transferase BG04_3442 PF03816 Cell envelope-related transcriptional attenuator domain BG04_3446 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BG04_3446 PF00205 Thiamine pyrophosphate enzyme, central domain BG04_3446 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BG04_3447 PF01645 Conserved region in glutamate synthase BG04_3449 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BG04_3449 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BG04_3451 PF02447 GntP family permease BG04_3455 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BG04_3455 PF18267 Rubredoxin NAD+ reductase C-terminal domain BG04_3455 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BG04_3455 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG04_3455 PF04324 BFD-like [2Fe-2S] binding domain BG04_3456 PF00355 Rieske [2Fe-2S] domain BG04_3457 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BG04_3458 PF01226 Formate/nitrite transporter BG04_346 PF00005 ABC transporter BG04_3460 PF00294 pfkB family carbohydrate kinase BG04_3461 PF06800 Sugar transport protein BG04_3464 PF01554 MatE BG04_3466 PF08031 Berberine and berberine like BG04_3466 PF01565 FAD binding domain BG04_3467 PF03816 Cell envelope-related transcriptional attenuator domain BG04_3469 PF01544 CorA-like Mg2+ transporter protein BG04_3470 PF17936 Bacterial Ig domain BG04_3470 PF00082 Subtilase family BG04_3474 PF13580 SIS domain BG04_3476 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BG04_3477 PF01979 Amidohydrolase family BG04_3478 PF00367 phosphotransferase system, EIIB BG04_3478 PF02378 Phosphotransferase system, EIIC BG04_3478 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BG04_3479 PF04474 Protein of unknown function (DUF554) BG04_3486 PF00005 ABC transporter BG04_3487 PF03471 Transporter associated domain BG04_3487 PF01595 Cyclin M transmembrane N-terminal domain BG04_3487 PF00571 CBS domain BG04_3488 PF13411 MerR HTH family regulatory protein BG04_349 PF08281 Sigma-70, region 4 BG04_349 PF04542 Sigma-70 region 2 BG04_3490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG04_3491 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BG04_3494 PF10502 Signal peptidase, peptidase S26 BG04_35 PF01047 MarR family BG04_3503 PF01546 Peptidase family M20/M25/M40 BG04_3506 PF13673 Acetyltransferase (GNAT) domain BG04_3506 PF04229 GrpB protein BG04_3507 PF07690 Major Facilitator Superfamily BG04_3509 PF00860 Permease family BG04_351 PF11188 Protein of unknown function (DUF2975) BG04_3511 PF00072 Response regulator receiver domain BG04_3511 PF04397 LytTr DNA-binding domain BG04_3512 PF00005 ABC transporter BG04_3513 PF12679 ABC-2 family transporter protein BG04_3514 PF01636 Phosphotransferase enzyme family BG04_3515 PF13411 MerR HTH family regulatory protein BG04_3516 PF01047 MarR family BG04_3517 PF01625 Peptide methionine sulfoxide reductase BG04_3517 PF01641 SelR domain BG04_3518 PF03845 Spore germination protein BG04_3519 PF05504 Spore germination B3/ GerAC like, C-terminal BG04_352 PF11188 Protein of unknown function (DUF2975) BG04_3520 PF03323 Bacillus/Clostridium GerA spore germination protein BG04_3521 PF00245 Alkaline phosphatase BG04_3522 PF00072 Response regulator receiver domain BG04_3522 PF04397 LytTr DNA-binding domain BG04_3523 PF00512 His Kinase A (phospho-acceptor) domain BG04_3523 PF09308 LuxQ, periplasmic BG04_3523 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_3523 PF00072 Response regulator receiver domain BG04_3524 PF03741 Integral membrane protein TerC family BG04_3525 PF04542 Sigma-70 region 2 BG04_3526 PF00269 Small, acid-soluble spore proteins, alpha/beta type BG04_353 PF13443 Cro/C1-type HTH DNA-binding domain BG04_3531 PF00561 alpha/beta hydrolase fold BG04_3532 PF02386 Cation transport protein BG04_3536 PF00392 Bacterial regulatory proteins, gntR family BG04_3536 PF07729 FCD domain BG04_3537 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BG04_3537 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BG04_3537 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BG04_3538 PF02540 NAD synthase BG04_3539 PF02754 Cysteine-rich domain BG04_3540 PF13183 4Fe-4S dicluster domain BG04_3540 PF11870 Domain of unknown function (DUF3390) BG04_3540 PF02589 LUD domain BG04_3541 PF02589 LUD domain BG04_3542 PF00989 PAS fold BG04_3542 PF13426 PAS domain BG04_3542 PF13188 PAS domain BG04_3542 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_3542 PF00512 His Kinase A (phospho-acceptor) domain BG04_3543 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BG04_3543 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BG04_3545 PF01008 Initiation factor 2 subunit family BG04_3546 PF01636 Phosphotransferase enzyme family BG04_3547 PF00795 Carbon-nitrogen hydrolase BG04_3548 PF00155 Aminotransferase class I and II BG04_3549 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BG04_3549 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BG04_355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_355 PF03466 LysR substrate binding domain BG04_3551 PF00596 Class II Aldolase and Adducin N-terminal domain BG04_3552 PF03079 ARD/ARD' family BG04_3554 PF00005 ABC transporter BG04_3555 PF02653 Branched-chain amino acid transport system / permease component BG04_3556 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG04_3556 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BG04_3557 PF09388 Spo0E like sporulation regulatory protein BG04_3558 PF02535 ZIP Zinc transporter BG04_3560 PF01047 MarR family BG04_3562 PF00512 His Kinase A (phospho-acceptor) domain BG04_3562 PF08447 PAS fold BG04_3562 PF00989 PAS fold BG04_3562 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_3564 PF10431 C-terminal, D2-small domain, of ClpB protein BG04_3564 PF17871 AAA lid domain BG04_3564 PF00004 ATPase family associated with various cellular activities (AAA) BG04_3564 PF07724 AAA domain (Cdc48 subfamily) BG04_3568 PF00106 short chain dehydrogenase BG04_3570 PF06508 Queuosine biosynthesis protein QueC BG04_3571 PF01242 6-pyruvoyl tetrahydropterin synthase BG04_3572 PF04055 Radical SAM superfamily BG04_3573 PF14489 QueF-like protein BG04_3574 PF13460 NAD(P)H-binding BG04_3576 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BG04_3577 PF01734 Patatin-like phospholipase BG04_3577 PF00027 Cyclic nucleotide-binding domain BG04_358 PF00381 PTS HPr component phosphorylation site BG04_3580 PF07486 Cell Wall Hydrolase BG04_3583 PF00860 Permease family BG04_3588 PF00809 Pterin binding enzyme BG04_3588 PF02607 B12 binding domain BG04_3588 PF02310 B12 binding domain BG04_3588 PF02965 Vitamin B12 dependent methionine synthase, activation domain BG04_3588 PF02574 Homocysteine S-methyltransferase BG04_3589 PF02574 Homocysteine S-methyltransferase BG04_3589 PF02219 Methylenetetrahydrofolate reductase BG04_359 PF08240 Alcohol dehydrogenase GroES-like domain BG04_359 PF00107 Zinc-binding dehydrogenase BG04_3591 PF00677 Lumazine binding domain BG04_3592 PF00925 GTP cyclohydrolase II BG04_3592 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BG04_3593 PF00885 6,7-dimethyl-8-ribityllumazine synthase BG04_3595 PF03123 CAT RNA binding domain BG04_3595 PF00874 PRD domain BG04_3596 PF02378 Phosphotransferase system, EIIC BG04_3596 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BG04_3596 PF00367 phosphotransferase system, EIIB BG04_3597 PF00381 PTS HPr component phosphorylation site BG04_3598 PF00391 PEP-utilising enzyme, mobile domain BG04_3598 PF02896 PEP-utilising enzyme, TIM barrel domain BG04_3598 PF05524 PEP-utilising enzyme, N-terminal BG04_3599 PF04172 LrgB-like family BG04_36 PF13411 MerR HTH family regulatory protein BG04_36 PF07739 TipAS antibiotic-recognition domain BG04_360 PF13411 MerR HTH family regulatory protein BG04_3600 PF03788 LrgA family BG04_3601 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_3601 PF03466 LysR substrate binding domain BG04_3603 PF00583 Acetyltransferase (GNAT) family BG04_3604 PF00106 short chain dehydrogenase BG04_3605 PF00881 Nitroreductase family BG04_3606 PF00155 Aminotransferase class I and II BG04_3610 PF00072 Response regulator receiver domain BG04_3610 PF01584 CheW-like domain BG04_3611 PF14177 YkyB-like protein BG04_3612 PF01476 LysM domain BG04_3612 PF03734 L,D-transpeptidase catalytic domain BG04_3613 PF02541 Ppx/GppA phosphatase family BG04_3614 PF13090 Polyphosphate kinase C-terminal domain 2 BG04_3614 PF13089 Polyphosphate kinase N-terminal domain BG04_3614 PF17941 Polyphosphate kinase C-terminal domain 1 BG04_3614 PF02503 Polyphosphate kinase middle domain BG04_3616 PF10518 TAT (twin-arginine translocation) pathway signal sequence BG04_3616 PF00149 Calcineurin-like phosphoesterase BG04_3618 PF10388 EAL-domain associated signalling protein domain BG04_3618 PF00563 EAL domain BG04_3621 PF08796 Protein of unknown function (DUF1797) BG04_3623 PF03466 LysR substrate binding domain BG04_3623 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_3624 PF14602 Hexapeptide repeat of succinyl-transferase BG04_3624 PF00132 Bacterial transferase hexapeptide (six repeats) BG04_3624 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BG04_3625 PF01546 Peptidase family M20/M25/M40 BG04_3625 PF07687 Peptidase dimerisation domain BG04_3626 PF03698 Uncharacterised protein family (UPF0180) BG04_3627 PF00924 Mechanosensitive ion channel BG04_3628 PF00578 AhpC/TSA family BG04_3628 PF10417 C-terminal domain of 1-Cys peroxiredoxin BG04_3629 PF00578 AhpC/TSA family BG04_363 PF07883 Cupin domain BG04_3630 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BG04_3630 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BG04_3631 PF00005 ABC transporter BG04_3631 PF00664 ABC transporter transmembrane region BG04_3632 PF00664 ABC transporter transmembrane region BG04_3632 PF00005 ABC transporter BG04_3633 PF02080 TrkA-C domain BG04_3633 PF02254 TrkA-N domain BG04_3634 PF00753 Metallo-beta-lactamase superfamily BG04_3634 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BG04_3634 PF17770 Ribonuclease J C-terminal domain BG04_3637 PF01327 Polypeptide deformylase BG04_3640 PF00676 Dehydrogenase E1 component BG04_3641 PF02779 Transketolase, pyrimidine binding domain BG04_3641 PF02780 Transketolase, C-terminal domain BG04_3642 PF02817 e3 binding domain BG04_3642 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BG04_3642 PF00364 Biotin-requiring enzyme BG04_3643 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BG04_3643 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG04_3645 PF02028 BCCT, betaine/carnitine/choline family transporter BG04_3647 PF01276 Orn/Lys/Arg decarboxylase, major domain BG04_3647 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BG04_3648 PF05256 Uncharacterised protein family (UPF0223) BG04_3649 PF06335 Protein of unknown function (DUF1054) BG04_3651 PF00459 Inositol monophosphatase family BG04_3654 PF14036 YlaH-like protein BG04_3656 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BG04_3658 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BG04_3659 PF02562 PhoH-like protein BG04_3659 PF13638 PIN domain BG04_3661 PF07408 Protein of unknown function (DUF1507) BG04_3662 PF01098 Cell cycle protein BG04_3663 PF02785 Biotin carboxylase C-terminal domain BG04_3663 PF00289 Biotin carboxylase, N-terminal domain BG04_3663 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BG04_3663 PF00364 Biotin-requiring enzyme BG04_3663 PF02436 Conserved carboxylase domain BG04_3663 PF00682 HMGL-like BG04_3664 PF02628 Cytochrome oxidase assembly protein BG04_3665 PF01040 UbiA prenyltransferase family BG04_3666 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BG04_3666 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BG04_3666 PF00034 Cytochrome c BG04_3667 PF00115 Cytochrome C and Quinol oxidase polypeptide I BG04_3668 PF00510 Cytochrome c oxidase subunit III BG04_3669 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BG04_367 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BG04_367 PF01740 STAS domain BG04_3670 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BG04_3671 PF08868 YugN-like family BG04_3672 PF00571 CBS domain BG04_3673 PF00188 Cysteine-rich secretory protein family BG04_3673 PF14504 CAP-associated N-terminal BG04_3674 PF09577 Sporulation protein YpjB (SpoYpjB) BG04_3675 PF04298 Putative neutral zinc metallopeptidase BG04_3676 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BG04_3676 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BG04_3677 PF03819 MazG nucleotide pyrophosphohydrolase domain BG04_3678 PF01113 Dihydrodipicolinate reductase, N-terminus BG04_3678 PF05173 Dihydrodipicolinate reductase, C-terminus BG04_3679 PF02142 MGS-like domain BG04_368 PF00313 'Cold-shock' DNA-binding domain BG04_3680 PF02585 GlcNAc-PI de-N-acetylase BG04_3681 PF00534 Glycosyl transferases group 1 BG04_3681 PF13439 Glycosyltransferase Family 4 BG04_3682 PF01743 Poly A polymerase head domain BG04_3682 PF12627 Probable RNA and SrmB- binding site of polymerase A BG04_3682 PF13735 tRNA nucleotidyltransferase domain 2 putative BG04_3683 PF02237 Biotin protein ligase C terminal domain BG04_3683 PF03099 Biotin/lipoate A/B protein ligase family BG04_3683 PF08279 HTH domain BG04_3684 PF02548 Ketopantoate hydroxymethyltransferase BG04_3685 PF02569 Pantoate-beta-alanine ligase BG04_3686 PF02261 Aspartate decarboxylase BG04_3687 PF00929 Exonuclease BG04_3687 PF13307 Helicase C-terminal domain BG04_3687 PF04851 Type III restriction enzyme, res subunit BG04_3689 PF14084 Protein of unknown function (DUF4264) BG04_3691 PF00155 Aminotransferase class I and II BG04_3692 PF01336 OB-fold nucleic acid binding domain BG04_3692 PF00152 tRNA synthetases class II (D, K and N) BG04_3693 PF07261 Replication initiation and membrane attachment BG04_3694 PF00633 Helix-hairpin-helix motif BG04_3694 PF10576 Iron-sulfur binding domain of endonuclease III BG04_3694 PF00730 HhH-GPD superfamily base excision DNA repair protein BG04_3696 PF00912 Transglycosylase BG04_3696 PF00905 Penicillin binding protein transpeptidase domain BG04_3697 PF03838 Recombination protein U BG04_3698 PF10720 Protein of unknown function (DUF2515) BG04_37 PF13302 Acetyltransferase (GNAT) domain BG04_370 PF00672 HAMP domain BG04_370 PF17202 Single cache domain 3 BG04_370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG04_3701 PF08807 Bacterial domain of unknown function (DUF1798) BG04_3704 PF14179 YppG-like protein BG04_3707 PF08757 CotH kinase protein BG04_371 PF02557 D-alanyl-D-alanine carboxypeptidase BG04_3710 PF01053 Cys/Met metabolism PLP-dependent enzyme BG04_3711 PF01053 Cys/Met metabolism PLP-dependent enzyme BG04_3714 PF00474 Sodium:solute symporter family BG04_3715 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BG04_3717 PF00313 'Cold-shock' DNA-binding domain BG04_3720 PF00990 Diguanylate cyclase, GGDEF domain BG04_3722 PF09369 Domain of unknown function (DUF1998) BG04_3722 PF00271 Helicase conserved C-terminal domain BG04_3722 PF00270 DEAD/DEAH box helicase BG04_3723 PF13482 RNase_H superfamily BG04_3725 PF06908 YspA SLOG family BG04_3726 PF05103 DivIVA protein BG04_3730 PF07730 Histidine kinase BG04_3730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_3731 PF00072 Response regulator receiver domain BG04_3731 PF00196 Bacterial regulatory proteins, luxR family BG04_3732 PF00128 Alpha amylase, catalytic domain BG04_3732 PF16657 Maltogenic Amylase, C-terminal domain BG04_3733 PF01170 Putative RNA methylase family UPF0020 BG04_3733 PF02926 THUMP domain BG04_3735 PF00528 Binding-protein-dependent transport system inner membrane component BG04_3736 PF00528 Binding-protein-dependent transport system inner membrane component BG04_3738 PF03459 TOBE domain BG04_3738 PF00005 ABC transporter BG04_3738 PF17912 MalK OB fold domain BG04_3740 PF13307 Helicase C-terminal domain BG04_3741 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BG04_3742 PF00156 Phosphoribosyl transferase domain BG04_3743 PF00860 Permease family BG04_3744 PF03466 LysR substrate binding domain BG04_3744 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_3745 PF00171 Aldehyde dehydrogenase family BG04_3747 PF02797 Chalcone and stilbene synthases, C-terminal domain BG04_3747 PF00195 Chalcone and stilbene synthases, N-terminal domain BG04_3748 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BG04_375 PF01544 CorA-like Mg2+ transporter protein BG04_3750 PF00350 Dynamin family BG04_3751 PF10127 RNA repair pathway DNA polymerase beta family BG04_3752 PF10752 Protein of unknown function (DUF2533) BG04_3756 PF13456 Reverse transcriptase-like BG04_3757 PF13456 Reverse transcriptase-like BG04_3758 PF10782 Zinc-finger BG04_376 PF01740 STAS domain BG04_3760 PF00313 'Cold-shock' DNA-binding domain BG04_3762 PF07690 Major Facilitator Superfamily BG04_3764 PF00860 Permease family BG04_3765 PF04951 D-aminopeptidase BG04_3766 PF00528 Binding-protein-dependent transport system inner membrane component BG04_3767 PF12911 N-terminal TM domain of oligopeptide transport permease C BG04_3767 PF00528 Binding-protein-dependent transport system inner membrane component BG04_3768 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG04_3768 PF00005 ABC transporter BG04_3769 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG04_3770 PF02016 LD-carboxypeptidase N-terminal domain BG04_3770 PF17676 LD-carboxypeptidase C-terminal domain BG04_3771 PF00877 NlpC/P60 family BG04_3772 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG04_3772 PF00005 ABC transporter BG04_3775 PF13302 Acetyltransferase (GNAT) domain BG04_3776 PF00563 EAL domain BG04_3776 PF03707 Bacterial signalling protein N terminal repeat BG04_3776 PF00990 Diguanylate cyclase, GGDEF domain BG04_3782 PF00196 Bacterial regulatory proteins, luxR family BG04_3782 PF00072 Response regulator receiver domain BG04_3783 PF07730 Histidine kinase BG04_3784 PF00487 Fatty acid desaturase BG04_3785 PF10990 Protein of unknown function (DUF2809) BG04_3787 PF13396 Phospholipase_D-nuclease N-terminal BG04_3787 PF13091 PLD-like domain BG04_3788 PF06724 Domain of Unknown Function (DUF1206) BG04_3789 PF10676 Spore germination protein gerPA/gerPF BG04_3790 PF01476 LysM domain BG04_3790 PF00877 NlpC/P60 family BG04_3791 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BG04_3792 PF00483 Nucleotidyl transferase BG04_3794 PF07690 Major Facilitator Superfamily BG04_3797 PF01979 Amidohydrolase family BG04_3798 PF03841 L-seryl-tRNA selenium transferase BG04_3799 PF07071 KDGP aldolase BG04_3801 PF07702 UTRA domain BG04_3801 PF00392 Bacterial regulatory proteins, gntR family BG04_3802 PF02447 GntP family permease BG04_3803 PF03437 BtpA family BG04_3804 PF13419 Haloacid dehalogenase-like hydrolase BG04_3806 PF00245 Alkaline phosphatase BG04_3807 PF01323 DSBA-like thioredoxin domain BG04_3808 PF00082 Subtilase family BG04_3810 PF01047 MarR family BG04_3812 PF07690 Major Facilitator Superfamily BG04_3816 PF14151 YfhD-like protein BG04_3817 PF01032 FecCD transport family BG04_3818 PF01032 FecCD transport family BG04_3819 PF01497 Periplasmic binding protein BG04_3820 PF00005 ABC transporter BG04_3821 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG04_3823 PF01053 Cys/Met metabolism PLP-dependent enzyme BG04_3824 PF07690 Major Facilitator Superfamily BG04_3825 PF00248 Aldo/keto reductase family BG04_3828 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BG04_3828 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BG04_3829 PF01638 HxlR-like helix-turn-helix BG04_3830 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BG04_3831 PF16350 FAD dependent oxidoreductase central domain BG04_3831 PF01571 Aminomethyltransferase folate-binding domain BG04_3831 PF08669 Glycine cleavage T-protein C-terminal barrel domain BG04_3831 PF01266 FAD dependent oxidoreductase BG04_3832 PF01266 FAD dependent oxidoreductase BG04_3833 PF00355 Rieske [2Fe-2S] domain BG04_3833 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BG04_3834 PF00571 CBS domain BG04_3834 PF00005 ABC transporter BG04_3835 PF00528 Binding-protein-dependent transport system inner membrane component BG04_3837 PF09308 LuxQ, periplasmic BG04_3837 PF00072 Response regulator receiver domain BG04_3837 PF00512 His Kinase A (phospho-acceptor) domain BG04_3837 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_3838 PF01739 CheR methyltransferase, SAM binding domain BG04_3838 PF03705 CheR methyltransferase, all-alpha domain BG04_3839 PF13426 PAS domain BG04_3839 PF07228 Stage II sporulation protein E (SpoIIE) BG04_384 PF08713 DNA alkylation repair enzyme BG04_3841 PF13520 Amino acid permease BG04_3843 PF13419 Haloacid dehalogenase-like hydrolase BG04_3845 PF02435 Levansucrase/Invertase BG04_3846 PF00251 Glycosyl hydrolases family 32 N-terminal domain BG04_3846 PF08244 Glycosyl hydrolases family 32 C terminal BG04_3847 PF00210 Ferritin-like domain BG04_3848 PF07690 Major Facilitator Superfamily BG04_3849 PF00155 Aminotransferase class I and II BG04_385 PF00583 Acetyltransferase (GNAT) family BG04_3850 PF01370 NAD dependent epimerase/dehydratase family BG04_3851 PF09021 HutP BG04_3852 PF07690 Major Facilitator Superfamily BG04_3855 PF00171 Aldehyde dehydrogenase family BG04_3856 PF00753 Metallo-beta-lactamase superfamily BG04_3858 PF01810 LysE type translocator BG04_3859 PF00324 Amino acid permease BG04_3861 PF14139 YpzG-like protein BG04_3862 PF17770 Ribonuclease J C-terminal domain BG04_3862 PF00753 Metallo-beta-lactamase superfamily BG04_3862 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BG04_3868 PF00324 Amino acid permease BG04_3871 PF00269 Small, acid-soluble spore proteins, alpha/beta type BG04_3872 PF00356 Bacterial regulatory proteins, lacI family BG04_3873 PF01306 LacY proton/sugar symporter BG04_3874 PF00251 Glycosyl hydrolases family 32 N-terminal domain BG04_3874 PF08244 Glycosyl hydrolases family 32 C terminal BG04_3875 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BG04_3876 PF02435 Levansucrase/Invertase BG04_3877 PF00158 Sigma-54 interaction domain BG04_3877 PF00874 PRD domain BG04_3877 PF03610 PTS system fructose IIA component BG04_3878 PF03610 PTS system fructose IIA component BG04_3879 PF03830 PTS system sorbose subfamily IIB component BG04_3880 PF03609 PTS system sorbose-specific iic component BG04_3881 PF03613 PTS system mannose/fructose/sorbose family IID component BG04_3882 PF08244 Glycosyl hydrolases family 32 C terminal BG04_3882 PF00251 Glycosyl hydrolases family 32 N-terminal domain BG04_3883 PF00557 Metallopeptidase family M24 BG04_3886 PF04073 Aminoacyl-tRNA editing domain BG04_3888 PF00248 Aldo/keto reductase family BG04_3889 PF00221 Aromatic amino acid lyase BG04_3890 PF17392 Urocanase C-terminal domain BG04_3890 PF17391 Urocanase N-terminal domain BG04_3890 PF01175 Urocanase Rossmann-like domain BG04_3891 PF01979 Amidohydrolase family BG04_3892 PF00491 Arginase family BG04_3893 PF12802 MarR family BG04_3895 PF01156 Inosine-uridine preferring nucleoside hydrolase BG04_3896 PF00180 Isocitrate/isopropylmalate dehydrogenase BG04_3897 PF03606 C4-dicarboxylate anaerobic carrier BG04_3898 PF01979 Amidohydrolase family BG04_3899 PF03575 Peptidase family S51 BG04_390 PF00392 Bacterial regulatory proteins, gntR family BG04_390 PF07729 FCD domain BG04_3900 PF00158 Sigma-54 interaction domain BG04_3900 PF02954 Bacterial regulatory protein, Fis family BG04_3900 PF13426 PAS domain BG04_3901 PF01348 Type II intron maturase BG04_3901 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BG04_3902 PF08461 Ribonuclease R winged-helix domain BG04_3902 PF00158 Sigma-54 interaction domain BG04_3906 PF13302 Acetyltransferase (GNAT) domain BG04_3912 PF01047 MarR family BG04_3913 PF00583 Acetyltransferase (GNAT) family BG04_3914 PF01022 Bacterial regulatory protein, arsR family BG04_3926 PF13419 Haloacid dehalogenase-like hydrolase BG04_3933 PF01476 LysM domain BG04_3933 PF00877 NlpC/P60 family BG04_3937 PF05163 DinB family BG04_394 PF06912 Protein of unknown function (DUF1275) BG04_3946 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_3946 PF03466 LysR substrate binding domain BG04_3947 PF12697 Alpha/beta hydrolase family BG04_3949 PF00561 alpha/beta hydrolase fold BG04_3954 PF09335 SNARE associated Golgi protein BG04_3955 PF04101 Glycosyltransferase family 28 C-terminal domain BG04_3955 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BG04_3956 PF01522 Polysaccharide deacetylase BG04_396 PF08220 DeoR-like helix-turn-helix domain BG04_396 PF00455 DeoR C terminal sensor domain BG04_3960 PF03845 Spore germination protein BG04_3961 PF05504 Spore germination B3/ GerAC like, C-terminal BG04_3962 PF03323 Bacillus/Clostridium GerA spore germination protein BG04_3963 PF12833 Helix-turn-helix domain BG04_3969 PF13426 PAS domain BG04_3969 PF00158 Sigma-54 interaction domain BG04_3969 PF02954 Bacterial regulatory protein, Fis family BG04_3970 PF00465 Iron-containing alcohol dehydrogenase BG04_3971 PF00171 Aldehyde dehydrogenase family BG04_3972 PF00356 Bacterial regulatory proteins, lacI family BG04_3976 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BG04_3976 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BG04_3977 PF00892 EamA-like transporter family BG04_3978 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_3978 PF03466 LysR substrate binding domain BG04_3980 PF03176 MMPL family BG04_3981 PF00440 Bacterial regulatory proteins, tetR family BG04_3981 PF08361 MAATS-type transcriptional repressor, C-terminal region BG04_3982 PF03741 Integral membrane protein TerC family BG04_3984 PF07875 Coat F domain BG04_3987 PF01740 STAS domain BG04_3987 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BG04_3989 PF01037 Lrp/AsnC ligand binding domain BG04_399 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BG04_399 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BG04_3990 PF06906 Protein of unknown function (DUF1272) BG04_3994 PF00893 Small Multidrug Resistance protein BG04_3995 PF00893 Small Multidrug Resistance protein BG04_3996 PF03466 LysR substrate binding domain BG04_3996 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_4003 PF00313 'Cold-shock' DNA-binding domain BG04_4005 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BG04_4005 PF00205 Thiamine pyrophosphate enzyme, central domain BG04_4005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BG04_4012 PF08141 Small acid-soluble spore protein H family BG04_4014 PF00701 Dihydrodipicolinate synthetase family BG04_4015 PF00892 EamA-like transporter family BG04_4016 PF00571 CBS domain BG04_4017 PF00356 Bacterial regulatory proteins, lacI family BG04_4018 PF05853 beta-keto acid cleavage enzyme BG04_4019 PF02558 Ketopantoate reductase PanE/ApbA BG04_4019 PF08546 Ketopantoate reductase PanE/ApbA C terminal BG04_4022 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BG04_4022 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BG04_4023 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_4023 PF03466 LysR substrate binding domain BG04_4024 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG04_4025 PF00528 Binding-protein-dependent transport system inner membrane component BG04_4026 PF00528 Binding-protein-dependent transport system inner membrane component BG04_4027 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG04_4027 PF00005 ABC transporter BG04_4028 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG04_4028 PF00005 ABC transporter BG04_4029 PF01554 MatE BG04_4033 PF13581 Histidine kinase-like ATPase domain BG04_4035 PF00155 Aminotransferase class I and II BG04_4035 PF00392 Bacterial regulatory proteins, gntR family BG04_4036 PF07690 Major Facilitator Superfamily BG04_4037 PF09339 IclR helix-turn-helix domain BG04_4037 PF01614 Bacterial transcriptional regulator BG04_4039 PF00171 Aldehyde dehydrogenase family BG04_404 PF01810 LysE type translocator BG04_4040 PF07690 Major Facilitator Superfamily BG04_4041 PF00701 Dihydrodipicolinate synthetase family BG04_4042 PF00920 Dehydratase family BG04_4043 PF02447 GntP family permease BG04_4044 PF00704 Glycosyl hydrolases family 18 BG04_4044 PF01476 LysM domain BG04_4045 PF01476 LysM domain BG04_4045 PF03734 L,D-transpeptidase catalytic domain BG04_4046 PF00682 HMGL-like BG04_4046 PF07836 DmpG-like communication domain BG04_4047 PF03601 Conserved hypothetical protein 698 BG04_4048 PF01790 Prolipoprotein diacylglyceryl transferase BG04_4052 PF08241 Methyltransferase domain BG04_4054 PF01638 HxlR-like helix-turn-helix BG04_4055 PF00753 Metallo-beta-lactamase superfamily BG04_4056 PF00795 Carbon-nitrogen hydrolase BG04_4059 PF13302 Acetyltransferase (GNAT) domain BG04_4060 PF13229 Right handed beta helix region BG04_4061 PF00154 recA bacterial DNA recombination protein BG04_4062 PF01451 Low molecular weight phosphotyrosine protein phosphatase BG04_4063 PF02040 Arsenical pump membrane protein BG04_4064 PF01022 Bacterial regulatory protein, arsR family BG04_4066 PF01022 Bacterial regulatory protein, arsR family BG04_4069 PF03992 Antibiotic biosynthesis monooxygenase BG04_4070 PF06821 Serine hydrolase BG04_4075 PF03551 Transcriptional regulator PadR-like family BG04_4079 PF00216 Bacterial DNA-binding protein BG04_4083 PF01740 STAS domain BG04_4086 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BG04_4086 PF01740 STAS domain BG04_4087 PF00487 Fatty acid desaturase BG04_4088 PF00313 'Cold-shock' DNA-binding domain BG04_4090 PF00271 Helicase conserved C-terminal domain BG04_4090 PF00270 DEAD/DEAH box helicase BG04_4092 PF00313 'Cold-shock' DNA-binding domain BG04_4094 PF00216 Bacterial DNA-binding protein BG04_4095 PF00216 Bacterial DNA-binding protein BG04_4096 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BG04_4099 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BG04_4099 PF01740 STAS domain BG04_4105 PF00313 'Cold-shock' DNA-binding domain BG04_411 PF01717 Cobalamin-independent synthase, Catalytic domain BG04_411 PF08267 Cobalamin-independent synthase, N-terminal domain BG04_4115 PF00324 Amino acid permease BG04_4116 PF05163 DinB family BG04_4118 PF00665 Integrase core domain BG04_4118 PF13333 Integrase core domain BG04_4118 PF13276 HTH-like domain BG04_4119 PF04232 Stage V sporulation protein S (SpoVS) BG04_4122 PF00589 Phage integrase family BG04_4122 PF02899 Phage integrase, N-terminal SAM-like domain BG04_4123 PF00589 Phage integrase family BG04_4123 PF02899 Phage integrase, N-terminal SAM-like domain BG04_4125 PF03734 L,D-transpeptidase catalytic domain BG04_4128 PF00155 Aminotransferase class I and II BG04_4128 PF00392 Bacterial regulatory proteins, gntR family BG04_4129 PF00795 Carbon-nitrogen hydrolase BG04_4131 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BG04_4131 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BG04_4132 PF02602 Uroporphyrinogen-III synthase HemD BG04_4133 PF00155 Aminotransferase class I and II BG04_4133 PF00392 Bacterial regulatory proteins, gntR family BG04_4134 PF00155 Aminotransferase class I and II BG04_4137 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BG04_4137 PF01276 Orn/Lys/Arg decarboxylase, major domain BG04_4138 PF10787 Uncharacterised protein from bacillus cereus group BG04_414 PF00083 Sugar (and other) transporter BG04_4143 PF03466 LysR substrate binding domain BG04_4143 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_4145 PF00367 phosphotransferase system, EIIB BG04_4145 PF02378 Phosphotransferase system, EIIC BG04_4148 PF04226 Transglycosylase associated protein BG04_4149 PF07486 Cell Wall Hydrolase BG04_415 PF02610 L-arabinose isomerase BG04_415 PF11762 L-arabinose isomerase C-terminal domain BG04_4151 PF01494 FAD binding domain BG04_4158 PF07690 Major Facilitator Superfamily BG04_416 PF00596 Class II Aldolase and Adducin N-terminal domain BG04_4161 PF04657 Putative inner membrane exporter, YdcZ BG04_4165 PF05525 Branched-chain amino acid transport protein BG04_4167 PF11799 impB/mucB/samB family C-terminal domain BG04_4167 PF00817 impB/mucB/samB family BG04_4167 PF11798 IMS family HHH motif BG04_4169 PF00248 Aldo/keto reductase family BG04_4171 PF00175 Oxidoreductase NAD-binding domain BG04_4171 PF00042 Globin BG04_4171 PF00970 Oxidoreductase FAD-binding domain BG04_4173 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BG04_4173 PF00391 PEP-utilising enzyme, mobile domain BG04_4174 PF04073 Aminoacyl-tRNA editing domain BG04_4175 PF17247 Family of unknown function (DUF5316) BG04_4176 PF00083 Sugar (and other) transporter BG04_418 PF00392 Bacterial regulatory proteins, gntR family BG04_4180 PF00171 Aldehyde dehydrogenase family BG04_4183 PF00923 Transaldolase/Fructose-6-phosphate aldolase BG04_4186 PF01263 Aldose 1-epimerase BG04_4188 PF00571 CBS domain BG04_419 PF01966 HD domain BG04_4190 PF00067 Cytochrome P450 BG04_4191 PF00440 Bacterial regulatory proteins, tetR family BG04_4191 PF08361 MAATS-type transcriptional repressor, C-terminal region BG04_4192 PF00480 ROK family BG04_4194 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BG04_4194 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BG04_4195 PF00083 Sugar (and other) transporter BG04_4196 PF00158 Sigma-54 interaction domain BG04_4196 PF00989 PAS fold BG04_4196 PF02954 Bacterial regulatory protein, Fis family BG04_4197 PF03600 Citrate transporter BG04_4201 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BG04_4202 PF00115 Cytochrome C and Quinol oxidase polypeptide I BG04_4203 PF00510 Cytochrome c oxidase subunit III BG04_4204 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BG04_4205 PF00582 Universal stress protein family BG04_4207 PF02628 Cytochrome oxidase assembly protein BG04_4208 PF13454 FAD-NAD(P)-binding BG04_421 PF17910 FeoB cytosolic helical domain BG04_421 PF07670 Nucleoside recognition BG04_421 PF07664 Ferrous iron transport protein B C terminus BG04_421 PF02421 Ferrous iron transport protein B BG04_4210 PF00860 Permease family BG04_4211 PF03600 Citrate transporter BG04_4212 PF00676 Dehydrogenase E1 component BG04_4213 PF02780 Transketolase, C-terminal domain BG04_4213 PF02779 Transketolase, pyrimidine binding domain BG04_4214 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BG04_4214 PF00364 Biotin-requiring enzyme BG04_4214 PF02817 e3 binding domain BG04_4215 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG04_4215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BG04_4216 PF01590 GAF domain BG04_4216 PF02954 Bacterial regulatory protein, Fis family BG04_4216 PF00158 Sigma-54 interaction domain BG04_4217 PF00107 Zinc-binding dehydrogenase BG04_4217 PF08240 Alcohol dehydrogenase GroES-like domain BG04_4218 PF01053 Cys/Met metabolism PLP-dependent enzyme BG04_4219 PF01047 MarR family BG04_422 PF07670 Nucleoside recognition BG04_422 PF02421 Ferrous iron transport protein B BG04_422 PF17910 FeoB cytosolic helical domain BG04_422 PF07664 Ferrous iron transport protein B C terminus BG04_4223 PF01594 AI-2E family transporter BG04_4224 PF02416 mttA/Hcf106 family BG04_4226 PF08532 Beta-galactosidase trimerisation domain BG04_4226 PF02449 Beta-galactosidase BG04_4226 PF08533 Beta-galactosidase C-terminal domain BG04_423 PF07664 Ferrous iron transport protein B C terminus BG04_423 PF04023 FeoA domain BG04_423 PF02421 Ferrous iron transport protein B BG04_423 PF07670 Nucleoside recognition BG04_423 PF17910 FeoB cytosolic helical domain BG04_4230 PF08864 UPF0302 domain BG04_4230 PF08858 IDEAL domain BG04_4231 PF00582 Universal stress protein family BG04_4232 PF01522 Polysaccharide deacetylase BG04_4233 PF00672 HAMP domain BG04_4233 PF13426 PAS domain BG04_4233 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_4233 PF00512 His Kinase A (phospho-acceptor) domain BG04_4234 PF00486 Transcriptional regulatory protein, C terminal BG04_4234 PF00072 Response regulator receiver domain BG04_4235 PF02583 Metal-sensitive transcriptional repressor BG04_4236 PF00403 Heavy-metal-associated domain BG04_4237 PF00403 Heavy-metal-associated domain BG04_4239 PF07563 Protein of unknown function (DUF1541) BG04_4240 PF07690 Major Facilitator Superfamily BG04_4248 PF01022 Bacterial regulatory protein, arsR family BG04_4249 PF02040 Arsenical pump membrane protein BG04_4251 PF03061 Thioesterase superfamily BG04_4252 PF00293 NUDIX domain BG04_4253 PF04239 Protein of unknown function (DUF421) BG04_4256 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BG04_4256 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BG04_4257 PF00392 Bacterial regulatory proteins, gntR family BG04_4257 PF07729 FCD domain BG04_4258 PF00180 Isocitrate/isopropylmalate dehydrogenase BG04_4259 PF07690 Major Facilitator Superfamily BG04_4260 PF01638 HxlR-like helix-turn-helix BG04_4261 PF00925 GTP cyclohydrolase II BG04_4261 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BG04_4262 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BG04_4262 PF01872 RibD C-terminal domain BG04_427 PF13115 YtkA-like BG04_4271 PF00581 Rhodanese-like domain BG04_4273 PF13539 D-alanyl-D-alanine carboxypeptidase BG04_4275 PF01522 Polysaccharide deacetylase BG04_4282 PF04204 Homoserine O-succinyltransferase BG04_4283 PF01268 Formate--tetrahydrofolate ligase BG04_4285 PF00255 Glutathione peroxidase BG04_4286 PF01966 HD domain BG04_4287 PF00005 ABC transporter BG04_4287 PF12848 ABC transporter BG04_4287 PF16326 ABC transporter C-terminal domain BG04_4288 PF08712 Scaffold protein Nfu/NifU N terminal BG04_4288 PF13769 Virulence factor BG04_4289 PF13739 Deacetylase PdaC BG04_4289 PF01522 Polysaccharide deacetylase BG04_4289 PF11738 Protein of unknown function (DUF3298) BG04_429 PF01047 MarR family BG04_4290 PF06491 Disulphide isomerase BG04_4291 PF04445 Putative SAM-dependent methyltransferase BG04_4292 PF14005 YpjP-like protein BG04_4293 PF00085 Thioredoxin BG04_4294 PF01497 Periplasmic binding protein BG04_4296 PF03186 CobD/Cbib protein BG04_4297 PF00155 Aminotransferase class I and II BG04_4299 PF02654 Cobalamin-5-phosphate synthase BG04_4300 PF00300 Histidine phosphatase superfamily (branch 1) BG04_4302 PF01923 Cobalamin adenosyltransferase BG04_4303 PF00892 EamA-like transporter family BG04_4304 PF13411 MerR HTH family regulatory protein BG04_4306 PF07683 Cobalamin synthesis protein cobW C-terminal domain BG04_4306 PF02492 CobW/HypB/UreG, nucleotide-binding domain BG04_4307 PF02558 Ketopantoate reductase PanE/ApbA BG04_4307 PF08546 Ketopantoate reductase PanE/ApbA C terminal BG04_4308 PF02151 UvrB/uvrC motif BG04_4308 PF08459 UvrC Helix-hairpin-helix N-terminal BG04_4308 PF01541 GIY-YIG catalytic domain BG04_4310 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BG04_4310 PF01367 5'-3' exonuclease, C-terminal SAM fold BG04_4311 PF08830 Protein of unknown function (DUF1806) BG04_4312 PF02585 GlcNAc-PI de-N-acetylase BG04_4313 PF03807 NADP oxidoreductase coenzyme F420-dependent BG04_4313 PF14748 Pyrroline-5-carboxylate reductase dimerisation BG04_4314 PF04134 Protein of unknown function, DUF393 BG04_4315 PF04542 Sigma-70 region 2 BG04_4315 PF08281 Sigma-70, region 4 BG04_4317 PF00011 Hsp20/alpha crystallin family BG04_4318 PF02334 Replication terminator protein BG04_4319 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BG04_4319 PF18277 AbrB C-terminal domain BG04_4320 PF01554 MatE BG04_4322 PF01593 Flavin containing amine oxidoreductase BG04_4323 PF00535 Glycosyl transferase family 2 BG04_4326 PF00884 Sulfatase BG04_4328 PF05816 Toxic anion resistance protein (TelA) BG04_4332 PF11738 Protein of unknown function (DUF3298) BG04_4332 PF01522 Polysaccharide deacetylase BG04_4332 PF13739 Deacetylase PdaC BG04_4333 PF03471 Transporter associated domain BG04_4333 PF02080 TrkA-C domain BG04_4333 PF00999 Sodium/hydrogen exchanger family BG04_4334 PF04389 Peptidase family M28 BG04_4334 PF02225 PA domain BG04_4335 PF00512 His Kinase A (phospho-acceptor) domain BG04_4335 PF00989 PAS fold BG04_4335 PF13188 PAS domain BG04_4335 PF13426 PAS domain BG04_4335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_4337 PF00375 Sodium:dicarboxylate symporter family BG04_4338 PF00128 Alpha amylase, catalytic domain BG04_4338 PF03714 Bacterial pullanase-associated domain BG04_4338 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BG04_4339 PF00171 Aldehyde dehydrogenase family BG04_4340 PF00258 Flavodoxin BG04_4340 PF00667 FAD binding domain BG04_4340 PF00175 Oxidoreductase NAD-binding domain BG04_4340 PF00067 Cytochrome P450 BG04_4344 PF01618 MotA/TolQ/ExbB proton channel family BG04_4345 PF00691 OmpA family BG04_4345 PF13677 Membrane MotB of proton-channel complex MotA/MotB BG04_4347 PF01593 Flavin containing amine oxidoreductase BG04_4348 PF09844 Uncharacterized conserved protein (COG2071) BG04_4349 PF01625 Peptide methionine sulfoxide reductase BG04_4350 PF03553 Na+/H+ antiporter family BG04_4351 PF00392 Bacterial regulatory proteins, gntR family BG04_4351 PF07729 FCD domain BG04_4352 PF00324 Amino acid permease BG04_4353 PF01757 Acyltransferase family BG04_4354 PF05698 Bacterial trigger factor protein (TF) C-terminus BG04_4356 PF00486 Transcriptional regulatory protein, C terminal BG04_4356 PF00072 Response regulator receiver domain BG04_4357 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_4357 PF00512 His Kinase A (phospho-acceptor) domain BG04_4358 PF01979 Amidohydrolase family BG04_4359 PF00854 POT family BG04_4361 PF00390 Malic enzyme, N-terminal domain BG04_4361 PF03949 Malic enzyme, NAD binding domain BG04_4362 PF03390 2-hydroxycarboxylate transporter family BG04_4364 PF00296 Luciferase-like monooxygenase BG04_4367 PF00462 Glutaredoxin BG04_4368 PF00497 Bacterial extracellular solute-binding proteins, family 3 BG04_4369 PF00528 Binding-protein-dependent transport system inner membrane component BG04_437 PF01476 LysM domain BG04_437 PF00877 NlpC/P60 family BG04_4370 PF00528 Binding-protein-dependent transport system inner membrane component BG04_4371 PF00005 ABC transporter BG04_4372 PF01687 Riboflavin kinase BG04_4373 PF00296 Luciferase-like monooxygenase BG04_4375 PF01520 N-acetylmuramoyl-L-alanine amidase BG04_4375 PF05036 Sporulation related domain BG04_438 PF03473 MOSC domain BG04_438 PF03475 3-alpha domain BG04_4382 PF00067 Cytochrome P450 BG04_4383 PF03641 Possible lysine decarboxylase BG04_4384 PF00390 Malic enzyme, N-terminal domain BG04_4384 PF03949 Malic enzyme, NAD binding domain BG04_4384 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BG04_4385 PF03703 Bacterial PH domain BG04_4386 PF03703 Bacterial PH domain BG04_4387 PF00291 Pyridoxal-phosphate dependent enzyme BG04_4389 PF00294 pfkB family carbohydrate kinase BG04_439 PF07662 Na+ dependent nucleoside transporter C-terminus BG04_439 PF01773 Na+ dependent nucleoside transporter N-terminus BG04_4390 PF01040 UbiA prenyltransferase family BG04_4391 PF05908 Poly-gamma-glutamate hydrolase BG04_4394 PF13411 MerR HTH family regulatory protein BG04_4399 PF08141 Small acid-soluble spore protein H family BG04_44 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BG04_4400 PF13037 Domain of unknown function (DUF3898) BG04_4400 PF13039 Protein of unknown function (DUF3900) BG04_4401 PF03466 LysR substrate binding domain BG04_4401 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_4402 PF00310 Glutamine amidotransferases class-II BG04_4402 PF04898 Glutamate synthase central domain BG04_4402 PF01645 Conserved region in glutamate synthase BG04_4402 PF01493 GXGXG motif BG04_4403 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG04_4403 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BG04_4407 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BG04_4407 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BG04_4410 PF13091 PLD-like domain BG04_4412 PF01047 MarR family BG04_4413 PF03788 LrgA family BG04_4414 PF04172 LrgB-like family BG04_4415 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BG04_4415 PF01740 STAS domain BG04_4418 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase BG04_4419 PF00535 Glycosyl transferase family 2 BG04_4420 PF04138 GtrA-like protein BG04_4421 PF00483 Nucleotidyl transferase BG04_4422 PF00072 Response regulator receiver domain BG04_4422 PF00486 Transcriptional regulatory protein, C terminal BG04_4423 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_4423 PF00512 His Kinase A (phospho-acceptor) domain BG04_4423 PF00672 HAMP domain BG04_4424 PF10055 Uncharacterized small protein (DUF2292) BG04_4427 PF00528 Binding-protein-dependent transport system inner membrane component BG04_4428 PF00528 Binding-protein-dependent transport system inner membrane component BG04_4429 PF00005 ABC transporter BG04_4429 PF17850 CysA C-terminal regulatory domain BG04_4429 PF12857 TOBE-like domain BG04_4430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BG04_4430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BG04_4431 PF00486 Transcriptional regulatory protein, C terminal BG04_4431 PF00072 Response regulator receiver domain BG04_4432 PF00672 HAMP domain BG04_4432 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_4432 PF00512 His Kinase A (phospho-acceptor) domain BG04_4433 PF00005 ABC transporter BG04_4436 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BG04_4436 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BG04_4439 PF00455 DeoR C terminal sensor domain BG04_4439 PF08220 DeoR-like helix-turn-helix domain BG04_4440 PF00294 pfkB family carbohydrate kinase BG04_4441 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BG04_4441 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BG04_4442 PF00696 Amino acid kinase family BG04_4442 PF13840 ACT domain BG04_4444 PF00080 Copper/zinc superoxide dismutase (SODC) BG04_4445 PF01593 Flavin containing amine oxidoreductase BG04_4447 PF00106 short chain dehydrogenase BG04_4448 PF01022 Bacterial regulatory protein, arsR family BG04_4449 PF00171 Aldehyde dehydrogenase family BG04_4450 PF03070 TENA/THI-4/PQQC family BG04_4454 PF00209 Sodium:neurotransmitter symporter family BG04_4455 PF07486 Cell Wall Hydrolase BG04_4456 PF00356 Bacterial regulatory proteins, lacI family BG04_4458 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BG04_4458 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BG04_4459 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BG04_4459 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BG04_4460 PF01261 Xylose isomerase-like TIM barrel BG04_4461 PF02245 Methylpurine-DNA glycosylase (MPG) BG04_4462 PF01225 Mur ligase family, catalytic domain BG04_4462 PF08245 Mur ligase middle domain BG04_4462 PF02875 Mur ligase family, glutamate ligase domain BG04_4464 PF00583 Acetyltransferase (GNAT) family BG04_4465 PF00440 Bacterial regulatory proteins, tetR family BG04_4465 PF08360 QacR-like protein, C-terminal region BG04_4466 PF07690 Major Facilitator Superfamily BG04_4467 PF02110 Hydroxyethylthiazole kinase family BG04_4468 PF02581 Thiamine monophosphate synthase BG04_4469 PF16242 Pyridoxamine 5'-phosphate oxidase like BG04_447 PF00589 Phage integrase family BG04_447 PF02899 Phage integrase, N-terminal SAM-like domain BG04_4474 PF04542 Sigma-70 region 2 BG04_4474 PF08281 Sigma-70, region 4 BG04_4475 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BG04_4476 PF07728 AAA domain (dynein-related subfamily) BG04_4477 PF00092 von Willebrand factor type A domain BG04_4478 PF00892 EamA-like transporter family BG04_4479 PF02837 Glycosyl hydrolases family 2, sugar binding domain BG04_4479 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BG04_4479 PF00703 Glycosyl hydrolases family 2 BG04_4479 PF16353 Domain of unknown function(DUF4981) BG04_4479 PF02929 Beta galactosidase small chain BG04_4480 PF12833 Helix-turn-helix domain BG04_4482 PF13302 Acetyltransferase (GNAT) domain BG04_4483 PF00005 ABC transporter BG04_4486 PF13243 Squalene-hopene cyclase C-terminal domain BG04_4486 PF13249 Squalene-hopene cyclase N-terminal domain BG04_4488 PF03853 YjeF-related protein N-terminus BG04_4488 PF01256 Carbohydrate kinase BG04_449 PF08141 Small acid-soluble spore protein H family BG04_4490 PF02567 Phenazine biosynthesis-like protein BG04_4492 PF01925 Sulfite exporter TauE/SafE BG04_4493 PF11495 Archaeal transcriptional regulator TrmB BG04_4493 PF01978 Sugar-specific transcriptional regulator TrmB BG04_4494 PF02525 Flavodoxin-like fold BG04_4497 PF00072 Response regulator receiver domain BG04_4497 PF00486 Transcriptional regulatory protein, C terminal BG04_4498 PF00155 Aminotransferase class I and II BG04_4498 PF00392 Bacterial regulatory proteins, gntR family BG04_4499 PF00512 His Kinase A (phospho-acceptor) domain BG04_4499 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_4500 PF01810 LysE type translocator BG04_4501 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG04_4504 PF07690 Major Facilitator Superfamily BG04_4505 PF07690 Major Facilitator Superfamily BG04_4507 PF10127 RNA repair pathway DNA polymerase beta family BG04_4510 PF01381 Helix-turn-helix BG04_4510 PF08671 Anti-repressor SinI BG04_4511 PF01494 FAD binding domain BG04_4513 PF00293 NUDIX domain BG04_4514 PF00857 Isochorismatase family BG04_4515 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BG04_4515 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BG04_4515 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BG04_4516 PF01467 Cytidylyltransferase-like BG04_4517 PF02540 NAD synthase BG04_4518 PF00575 S1 RNA binding domain BG04_4520 PF02225 PA domain BG04_4520 PF00082 Subtilase family BG04_4520 PF05922 Peptidase inhibitor I9 BG04_4520 PF13860 FlgD Ig-like domain BG04_4522 PF00708 Acylphosphatase BG04_4523 PF07690 Major Facilitator Superfamily BG04_4524 PF00296 Luciferase-like monooxygenase BG04_4525 PF00589 Phage integrase family BG04_4525 PF02899 Phage integrase, N-terminal SAM-like domain BG04_4528 PF01381 Helix-turn-helix BG04_453 PF11611 Domain of unknown function (DUF4352) BG04_454 PF00440 Bacterial regulatory proteins, tetR family BG04_455 PF00266 Aminotransferase class-V BG04_4553 PF00574 Clp protease BG04_456 PF00324 Amino acid permease BG04_457 PF03301 Tryptophan 2,3-dioxygenase BG04_4570 PF05105 Bacteriophage holin family BG04_4571 PF01510 N-acetylmuramoyl-L-alanine amidase BG04_4571 PF01471 Putative peptidoglycan binding domain BG04_458 PF04199 Putative cyclase BG04_4582 PF07883 Cupin domain BG04_4582 PF12833 Helix-turn-helix domain BG04_4583 PF00892 EamA-like transporter family BG04_4584 PF00005 ABC transporter BG04_4584 PF12848 ABC transporter BG04_4585 PF03323 Bacillus/Clostridium GerA spore germination protein BG04_4586 PF03845 Spore germination protein BG04_4587 PF05504 Spore germination B3/ GerAC like, C-terminal BG04_4588 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ BG04_4589 PF00005 ABC transporter BG04_459 PF01361 Tautomerase enzyme BG04_4591 PF03553 Na+/H+ antiporter family BG04_4593 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BG04_4593 PF00356 Bacterial regulatory proteins, lacI family BG04_4594 PF11132 Transcriptional regulator protein (SplA) BG04_4599 PF01131 DNA topoisomerase BG04_4599 PF01751 Toprim domain BG04_4601 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG04_4601 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BG04_4604 PF13823 Alcohol dehydrogenase GroES-associated BG04_4604 PF00107 Zinc-binding dehydrogenase BG04_4604 PF08240 Alcohol dehydrogenase GroES-like domain BG04_4605 PF13091 PLD-like domain BG04_4609 PF03553 Na+/H+ antiporter family BG04_461 PF07836 DmpG-like communication domain BG04_461 PF00682 HMGL-like BG04_4610 PF13302 Acetyltransferase (GNAT) domain BG04_4612 PF04294 VanW like protein BG04_4618 PF11181 Heat induced stress protein YflT BG04_462 PF01118 Semialdehyde dehydrogenase, NAD binding domain BG04_462 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation BG04_4625 PF00535 Glycosyl transferase family 2 BG04_4628 PF00270 DEAD/DEAH box helicase BG04_4628 PF00271 Helicase conserved C-terminal domain BG04_4628 PF00570 HRDC domain BG04_4628 PF16124 RecQ zinc-binding BG04_4628 PF09382 RQC domain BG04_4629 PF00158 Sigma-54 interaction domain BG04_463 PF01557 Fumarylacetoacetate (FAA) hydrolase family BG04_4630 PF00491 Arginase family BG04_4632 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BG04_4634 PF01040 UbiA prenyltransferase family BG04_4635 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BG04_4635 PF01411 tRNA synthetases class II (A) BG04_4635 PF02272 DHHA1 domain BG04_4636 PF01061 ABC-2 type transporter BG04_4637 PF08000 Bacterial PH domain BG04_4638 PF07690 Major Facilitator Superfamily BG04_4639 PF03466 LysR substrate binding domain BG04_4639 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_464 PF00171 Aldehyde dehydrogenase family BG04_4640 PF00392 Bacterial regulatory proteins, gntR family BG04_4641 PF00005 ABC transporter BG04_4643 PF08281 Sigma-70, region 4 BG04_4643 PF04542 Sigma-70 region 2 BG04_4645 PF00817 impB/mucB/samB family BG04_4645 PF11799 impB/mucB/samB family C-terminal domain BG04_4645 PF11798 IMS family HHH motif BG04_4646 PF02566 OsmC-like protein BG04_4647 PF01047 MarR family BG04_465 PF01042 Endoribonuclease L-PSP BG04_4653 PF06725 3D domain BG04_4653 PF01476 LysM domain BG04_4656 PF00512 His Kinase A (phospho-acceptor) domain BG04_4656 PF00989 PAS fold BG04_4656 PF13426 PAS domain BG04_4656 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_4656 PF13188 PAS domain BG04_4658 PF14748 Pyrroline-5-carboxylate reductase dimerisation BG04_4658 PF03807 NADP oxidoreductase coenzyme F420-dependent BG04_4659 PF01472 PUA domain BG04_4659 PF00696 Amino acid kinase family BG04_4660 PF00171 Aldehyde dehydrogenase family BG04_4663 PF03737 Aldolase/RraA BG04_4666 PF03176 MMPL family BG04_4668 PF00269 Small, acid-soluble spore proteins, alpha/beta type BG04_4669 PF03631 Virulence factor BrkB BG04_467 PF06052 3-hydroxyanthranilic acid dioxygenase BG04_4671 PF07859 alpha/beta hydrolase fold BG04_4678 PF01850 PIN domain BG04_468 PF03358 NADPH-dependent FMN reductase BG04_4680 PF12464 Maltose acetyltransferase BG04_4680 PF14602 Hexapeptide repeat of succinyl-transferase BG04_4681 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG04_4683 PF01740 STAS domain BG04_4684 PF11755 Protein of unknown function (DUF3311) BG04_4685 PF00474 Sodium:solute symporter family BG04_4687 PF02811 PHP domain BG04_4687 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BG04_4687 PF11490 DNA polymerase III polC-type N-terminus II BG04_4687 PF14480 DNA polymerase III polC-type N-terminus I BG04_4687 PF14579 Helix-hairpin-helix motif BG04_4687 PF00929 Exonuclease BG04_4687 PF07733 Bacterial DNA polymerase III alpha NTPase domain BG04_4689 PF05547 Immune inhibitor A peptidase M6 BG04_469 PF06574 FAD synthetase BG04_4690 PF10415 Fumarase C C-terminus BG04_4690 PF00206 Lyase BG04_4692 PF01471 Putative peptidoglycan binding domain BG04_4692 PF01183 Glycosyl hydrolases family 25 BG04_4694 PF13426 PAS domain BG04_4694 PF13188 PAS domain BG04_4694 PF00989 PAS fold BG04_4694 PF00512 His Kinase A (phospho-acceptor) domain BG04_4694 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_4696 PF02868 Thermolysin metallopeptidase, alpha-helical domain BG04_4696 PF07504 Fungalysin/Thermolysin Propeptide Motif BG04_4696 PF03413 Peptidase propeptide and YPEB domain BG04_4696 PF01447 Thermolysin metallopeptidase, catalytic domain BG04_4698 PF00923 Transaldolase/Fructose-6-phosphate aldolase BG04_47 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BG04_470 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal BG04_470 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal BG04_4701 PF00881 Nitroreductase family BG04_4703 PF00106 short chain dehydrogenase BG04_4704 PF00989 PAS fold BG04_4704 PF17203 Single cache domain 3 BG04_4704 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BG04_4704 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_4705 PF12431 Transcriptional regulator BG04_4705 PF00072 Response regulator receiver domain BG04_4706 PF03600 Citrate transporter BG04_4710 PF07687 Peptidase dimerisation domain BG04_4710 PF01546 Peptidase family M20/M25/M40 BG04_4713 PF03551 Transcriptional regulator PadR-like family BG04_4715 PF01596 O-methyltransferase BG04_4716 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_4716 PF03466 LysR substrate binding domain BG04_4719 PF00375 Sodium:dicarboxylate symporter family BG04_4720 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BG04_4720 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BG04_4722 PF01266 FAD dependent oxidoreductase BG04_4723 PF10925 Protein of unknown function (DUF2680) BG04_4724 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_4724 PF00512 His Kinase A (phospho-acceptor) domain BG04_4724 PF00989 PAS fold BG04_4724 PF08447 PAS fold BG04_4726 PF02770 Acyl-CoA dehydrogenase, middle domain BG04_4726 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BG04_4726 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BG04_4728 PF00501 AMP-binding enzyme BG04_4728 PF13193 AMP-binding enzyme C-terminal domain BG04_4729 PF16925 Tetracyclin repressor-like, C-terminal domain BG04_4729 PF00440 Bacterial regulatory proteins, tetR family BG04_4730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BG04_4730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BG04_4731 PF00378 Enoyl-CoA hydratase/isomerase BG04_4734 PF04029 2-phosphosulpholactate phosphatase BG04_4735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BG04_4735 PF02770 Acyl-CoA dehydrogenase, middle domain BG04_4735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BG04_4737 PF00378 Enoyl-CoA hydratase/isomerase BG04_4738 PF08240 Alcohol dehydrogenase GroES-like domain BG04_4738 PF00107 Zinc-binding dehydrogenase BG04_4739 PF01680 SOR/SNZ family BG04_474 PF13411 MerR HTH family regulatory protein BG04_4742 PF01144 Coenzyme A transferase BG04_4743 PF01144 Coenzyme A transferase BG04_4744 PF00108 Thiolase, N-terminal domain BG04_4744 PF02803 Thiolase, C-terminal domain BG04_4745 PF00202 Aminotransferase class-III BG04_4747 PF00171 Aldehyde dehydrogenase family BG04_475 PF00294 pfkB family carbohydrate kinase BG04_4750 PF12544 Lysine-2,3-aminomutase BG04_4751 PF14122 YokU-like protein, putative antitoxin BG04_4752 PF00324 Amino acid permease BG04_4753 PF00753 Metallo-beta-lactamase superfamily BG04_4756 PF00465 Iron-containing alcohol dehydrogenase BG04_4757 PF07690 Major Facilitator Superfamily BG04_4758 PF12833 Helix-turn-helix domain BG04_4759 PF02525 Flavodoxin-like fold BG04_4760 PF07478 D-ala D-ala ligase C-terminus BG04_4760 PF01820 D-ala D-ala ligase N-terminus BG04_4762 PF00892 EamA-like transporter family BG04_4764 PF00155 Aminotransferase class I and II BG04_4766 PF00253 Ribosomal protein S14p/S29e BG04_4767 PF07486 Cell Wall Hydrolase BG04_4768 PF16347 Domain of unknown function (DUF4976) BG04_4768 PF00884 Sulfatase BG04_4769 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BG04_4769 PF03129 Anticodon binding domain BG04_4769 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BG04_4769 PF02824 TGS domain BG04_477 PF08240 Alcohol dehydrogenase GroES-like domain BG04_477 PF00107 Zinc-binding dehydrogenase BG04_4771 PF13520 Amino acid permease BG04_4772 PF07690 Major Facilitator Superfamily BG04_4773 PF01047 MarR family BG04_4774 PF03176 MMPL family BG04_4776 PF00005 ABC transporter BG04_4776 PF17912 MalK OB fold domain BG04_4776 PF03459 TOBE domain BG04_4777 PF01380 SIS domain BG04_4778 PF01547 Bacterial extracellular solute-binding protein BG04_4779 PF00528 Binding-protein-dependent transport system inner membrane component BG04_478 PF13176 Tetratricopeptide repeat BG04_478 PF00931 NB-ARC domain BG04_4780 PF00528 Binding-protein-dependent transport system inner membrane component BG04_4781 PF00294 pfkB family carbohydrate kinase BG04_4782 PF00392 Bacterial regulatory proteins, gntR family BG04_4782 PF07702 UTRA domain BG04_4783 PF01740 STAS domain BG04_4783 PF13426 PAS domain BG04_4784 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BG04_4785 PF01022 Bacterial regulatory protein, arsR family BG04_4787 PF12697 Alpha/beta hydrolase family BG04_4789 PF08450 SMP-30/Gluconolactonase/LRE-like region BG04_4790 PF01152 Bacterial-like globin BG04_4791 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal BG04_4791 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal BG04_4792 PF05675 Protein of unknown function (DUF817) BG04_4794 PF00183 Hsp90 protein BG04_4795 PF01842 ACT domain BG04_4795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BG04_4795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BG04_4799 PF13291 ACT domain BG04_4799 PF04607 Region found in RelA / SpoT proteins BG04_4799 PF02824 TGS domain BG04_4800 PF01183 Glycosyl hydrolases family 25 BG04_4800 PF01471 Putative peptidoglycan binding domain BG04_4802 PF00892 EamA-like transporter family BG04_4803 PF00392 Bacterial regulatory proteins, gntR family BG04_4803 PF00155 Aminotransferase class I and II BG04_4807 PF06150 ChaB BG04_4808 PF14864 Alkyl sulfatase C-terminal BG04_4808 PF14863 Alkyl sulfatase dimerisation BG04_4808 PF00753 Metallo-beta-lactamase superfamily BG04_4810 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BG04_4810 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BG04_4813 PF04134 Protein of unknown function, DUF393 BG04_4814 PF00005 ABC transporter BG04_4828 PF01497 Periplasmic binding protein BG04_4829 PF07977 FabA-like domain BG04_4831 PF00293 NUDIX domain BG04_4832 PF13460 NAD(P)H-binding BG04_4833 PF00501 AMP-binding enzyme BG04_4833 PF13193 AMP-binding enzyme C-terminal domain BG04_4834 PF01047 MarR family BG04_4836 PF04294 VanW like protein BG04_4837 PF13193 AMP-binding enzyme C-terminal domain BG04_4837 PF00501 AMP-binding enzyme BG04_484 PF08818 Domain of unknown function (DU1801) BG04_4844 PF00282 Pyridoxal-dependent decarboxylase conserved domain BG04_4850 PF01226 Formate/nitrite transporter BG04_4851 PF10057 Uncharacterized conserved protein (DUF2294) BG04_4854 PF07690 Major Facilitator Superfamily BG04_4855 PF01565 FAD binding domain BG04_4857 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG04_4857 PF00672 HAMP domain BG04_4857 PF02743 Cache domain BG04_4859 PF12850 Calcineurin-like phosphoesterase superfamily domain BG04_4861 PF00149 Calcineurin-like phosphoesterase BG04_4862 PF03167 Uracil DNA glycosylase superfamily BG04_4863 PF00877 NlpC/P60 family BG04_4864 PF02602 Uroporphyrinogen-III synthase HemD BG04_4865 PF01614 Bacterial transcriptional regulator BG04_4865 PF09339 IclR helix-turn-helix domain BG04_4866 PF00289 Biotin carboxylase, N-terminal domain BG04_4866 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BG04_4866 PF02785 Biotin carboxylase C-terminal domain BG04_4867 PF00364 Biotin-requiring enzyme BG04_4868 PF02626 Carboxyltransferase domain, subdomain A and B BG04_4869 PF02682 Carboxyltransferase domain, subdomain C and D BG04_4870 PF07286 Protein of unknown function (DUF1445) BG04_4871 PF01566 Natural resistance-associated macrophage protein BG04_4872 PF03746 LamB/YcsF family BG04_4873 PF11941 Domain of unknown function (DUF3459) BG04_4873 PF00128 Alpha amylase, catalytic domain BG04_4874 PF06146 Phosphate-starvation-inducible E BG04_4875 PF00269 Small, acid-soluble spore proteins, alpha/beta type BG04_4878 PF07690 Major Facilitator Superfamily BG04_488 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_488 PF03466 LysR substrate binding domain BG04_4880 PF00248 Aldo/keto reductase family BG04_4882 PF01965 DJ-1/PfpI family BG04_4883 PF01053 Cys/Met metabolism PLP-dependent enzyme BG04_4884 PF05368 NmrA-like family BG04_4885 PF01638 HxlR-like helix-turn-helix BG04_4886 PF13333 Integrase core domain BG04_4886 PF00665 Integrase core domain BG04_4886 PF13276 HTH-like domain BG04_4888 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BG04_4888 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BG04_4892 PF00296 Luciferase-like monooxygenase BG04_4893 PF00296 Luciferase-like monooxygenase BG04_4894 PF00296 Luciferase-like monooxygenase BG04_4896 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BG04_49 PF00873 AcrB/AcrD/AcrF family BG04_4901 PF00485 Phosphoribulokinase / Uridine kinase family BG04_4905 PF07690 Major Facilitator Superfamily BG04_4907 PF03734 L,D-transpeptidase catalytic domain BG04_4911 PF03845 Spore germination protein BG04_4912 PF07690 Major Facilitator Superfamily BG04_4913 PF01047 MarR family BG04_4913 PF00583 Acetyltransferase (GNAT) family BG04_4916 PF00892 EamA-like transporter family BG04_4917 PF13411 MerR HTH family regulatory protein BG04_4918 PF00313 'Cold-shock' DNA-binding domain BG04_492 PF07690 Major Facilitator Superfamily BG04_4920 PF00271 Helicase conserved C-terminal domain BG04_4920 PF00270 DEAD/DEAH box helicase BG04_4923 PF01740 STAS domain BG04_4923 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BG04_4928 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG04_4929 PF00132 Bacterial transferase hexapeptide (six repeats) BG04_4936 PF11553 Protein of unknown function (DUF3231) BG04_494 PF01177 Asp/Glu/Hydantoin racemase BG04_4942 PF13193 AMP-binding enzyme C-terminal domain BG04_4942 PF00501 AMP-binding enzyme BG04_4943 PF02632 BioY family BG04_4944 PF00108 Thiolase, N-terminal domain BG04_4944 PF02803 Thiolase, C-terminal domain BG04_4946 PF00271 Helicase conserved C-terminal domain BG04_4946 PF00176 SNF2 family N-terminal domain BG04_4946 PF04434 SWIM zinc finger BG04_4948 PF03358 NADPH-dependent FMN reductase BG04_4949 PF00196 Bacterial regulatory proteins, luxR family BG04_4949 PF00072 Response regulator receiver domain BG04_495 PF00989 PAS fold BG04_495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_495 PF08447 PAS fold BG04_495 PF00512 His Kinase A (phospho-acceptor) domain BG04_4950 PF07730 Histidine kinase BG04_4950 PF13185 GAF domain BG04_4954 PF13536 Putative multidrug resistance efflux transporter BG04_4956 PF13673 Acetyltransferase (GNAT) domain BG04_4957 PF00920 Dehydratase family BG04_4958 PF12146 Serine aminopeptidase, S33 BG04_4959 PF01368 DHH family BG04_4959 PF02833 DHHA2 domain BG04_496 PF08970 Sporulation inhibitor A BG04_4964 PF01063 Amino-transferase class IV BG04_4966 PF01553 Acyltransferase BG04_4967 PF00860 Permease family BG04_4968 PF09349 OHCU decarboxylase BG04_4968 PF01014 Uricase BG04_4969 PF00576 HIUase/Transthyretin family BG04_4970 PF13302 Acetyltransferase (GNAT) domain BG04_4973 PF01566 Natural resistance-associated macrophage protein BG04_4976 PF01047 MarR family BG04_4978 PF02899 Phage integrase, N-terminal SAM-like domain BG04_4978 PF00589 Phage integrase family BG04_498 PF00665 Integrase core domain BG04_4983 PF13520 Amino acid permease BG04_4984 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BG04_4985 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BG04_4986 PF06277 Ethanolamine utilisation protein EutA BG04_4987 PF09515 Thiamine transporter protein (Thia_YuaJ) BG04_4988 PF00324 Amino acid permease BG04_499 PF01695 IstB-like ATP binding protein BG04_4990 PF00583 Acetyltransferase (GNAT) family BG04_4991 PF00857 Isochorismatase family BG04_4993 PF08892 YqcI/YcgG family BG04_4994 PF00561 alpha/beta hydrolase fold BG04_4994 PF08386 TAP-like protein BG04_4995 PF01810 LysE type translocator BG04_4996 PF00521 DNA gyrase/topoisomerase IV, subunit A BG04_4996 PF03989 DNA gyrase C-terminal domain, beta-propeller BG04_4997 PF00204 DNA gyrase B BG04_4997 PF00986 DNA gyrase B subunit, carboxyl terminus BG04_4997 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_4997 PF01751 Toprim domain BG04_4998 PF13380 CoA binding domain BG04_4999 PF02660 Glycerol-3-phosphate acyltransferase BG04_5000 PF01521 Iron-sulphur cluster biosynthesis BG04_5001 PF03061 Thioesterase superfamily BG04_5005 PF08177 Small acid-soluble spore protein N family BG04_5007 PF00578 AhpC/TSA family BG04_5008 PF00694 Aconitase C-terminal domain BG04_5008 PF00330 Aconitase family (aconitate hydratase) BG04_5010 PF08179 Small acid-soluble spore protein P family BG04_5011 PF00011 Hsp20/alpha crystallin family BG04_5012 PF02735 Ku70/Ku80 beta-barrel domain BG04_5013 PF13333 Integrase core domain BG04_5013 PF00665 Integrase core domain BG04_5013 PF13276 HTH-like domain BG04_5020 PF00111 2Fe-2S iron-sulfur cluster binding domain BG04_5020 PF01799 [2Fe-2S] binding domain BG04_5021 PF00941 FAD binding domain in molybdopterin dehydrogenase BG04_5021 PF03450 CO dehydrogenase flavoprotein C-terminal domain BG04_5022 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BG04_5022 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BG04_5023 PF12804 MobA-like NTP transferase domain BG04_5024 PF02625 XdhC and CoxI family BG04_5024 PF13478 XdhC Rossmann domain BG04_503 PF01740 STAS domain BG04_503 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BG04_5036 PF01066 CDP-alcohol phosphatidyltransferase BG04_5039 PF07690 Major Facilitator Superfamily BG04_5040 PF04463 Protein of unknown function (DUF523) BG04_5041 PF03780 Asp23 family, cell envelope-related function BG04_5044 PF03631 Virulence factor BrkB BG04_5046 PF01235 Sodium:alanine symporter family BG04_5047 PF01235 Sodium:alanine symporter family BG04_5048 PF07690 Major Facilitator Superfamily BG04_5050 PF07690 Major Facilitator Superfamily BG04_5051 PF13411 MerR HTH family regulatory protein BG04_5053 PF00484 Carbonic anhydrase BG04_5054 PF01740 STAS domain BG04_5054 PF00916 Sulfate permease family BG04_5055 PF00486 Transcriptional regulatory protein, C terminal BG04_5055 PF00072 Response regulator receiver domain BG04_5056 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_5056 PF13426 PAS domain BG04_5056 PF00512 His Kinase A (phospho-acceptor) domain BG04_5056 PF00672 HAMP domain BG04_5058 PF09346 SMI1 / KNR4 family (SUKH-1) BG04_5059 PF13520 Amino acid permease BG04_5061 PF07454 Stage II sporulation protein P (SpoIIP) BG04_5062 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BG04_5062 PF12557 Cob(I)alamin adenosyltransferase N terminal BG04_5065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BG04_5066 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BG04_5066 PF07685 CobB/CobQ-like glutamine amidotransferase domain BG04_5067 PF01890 Cobalamin synthesis G C-terminus BG04_5067 PF11761 Cobalamin biosynthesis central region BG04_5067 PF11760 Cobalamin synthesis G N-terminal BG04_5068 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BG04_5069 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BG04_5070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BG04_5071 PF01888 CbiD BG04_5072 PF02570 Precorrin-8X methylmutase BG04_5073 PF02571 Precorrin-6x reductase CbiJ/CobK BG04_5074 PF01903 CbiX BG04_5075 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BG04_5075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BG04_5078 PF05343 M42 glutamyl aminopeptidase BG04_5079 PF00375 Sodium:dicarboxylate symporter family BG04_5080 PF05525 Branched-chain amino acid transport protein BG04_5084 PF00909 Ammonium Transporter Family BG04_5086 PF07849 Protein of unknown function (DUF1641) BG04_5087 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG04_5088 PF03547 Membrane transport protein BG04_5089 PF00390 Malic enzyme, N-terminal domain BG04_5089 PF03949 Malic enzyme, NAD binding domain BG04_509 PF00269 Small, acid-soluble spore proteins, alpha/beta type BG04_5090 PF01546 Peptidase family M20/M25/M40 BG04_5094 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BG04_5095 PF02441 Flavoprotein BG04_5096 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_5096 PF03466 LysR substrate binding domain BG04_5097 PF03547 Membrane transport protein BG04_51 PF00440 Bacterial regulatory proteins, tetR family BG04_5101 PF00296 Luciferase-like monooxygenase BG04_5102 PF13183 4Fe-4S dicluster domain BG04_5102 PF02754 Cysteine-rich domain BG04_5103 PF01565 FAD binding domain BG04_5103 PF02913 FAD linked oxidases, C-terminal domain BG04_5104 PF05651 Putative sugar diacid recognition BG04_5104 PF17853 GGDEF-like domain BG04_5104 PF13556 PucR C-terminal helix-turn-helix domain BG04_5105 PF01965 DJ-1/PfpI family BG04_5108 PF00465 Iron-containing alcohol dehydrogenase BG04_5111 PF00005 ABC transporter BG04_5112 PF13185 GAF domain BG04_5112 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_5112 PF13492 GAF domain BG04_5112 PF07730 Histidine kinase BG04_5113 PF00072 Response regulator receiver domain BG04_5113 PF00196 Bacterial regulatory proteins, luxR family BG04_5114 PF01546 Peptidase family M20/M25/M40 BG04_5114 PF07687 Peptidase dimerisation domain BG04_5120 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase BG04_5121 PF00296 Luciferase-like monooxygenase BG04_5123 PF09335 SNARE associated Golgi protein BG04_5124 PF04493 Endonuclease V BG04_5125 PF03009 Glycerophosphoryl diester phosphodiesterase family BG04_5126 PF00583 Acetyltransferase (GNAT) family BG04_5126 PF00795 Carbon-nitrogen hydrolase BG04_5127 PF00158 Sigma-54 interaction domain BG04_5128 PF00795 Carbon-nitrogen hydrolase BG04_5129 PF00324 Amino acid permease BG04_513 PF01098 Cell cycle protein BG04_5149 PF04740 LXG domain of WXG superfamily BG04_5149 PF14449 Pre-toxin TG BG04_5149 PF14431 YwqJ-like deaminase BG04_5152 PF01554 MatE BG04_5155 PF01047 MarR family BG04_5156 PF03372 Endonuclease/Exonuclease/phosphatase family BG04_5158 PF00156 Phosphoribosyl transferase domain BG04_5158 PF05139 Erythromycin esterase BG04_5159 PF03928 Haem-degrading BG04_516 PF01544 CorA-like Mg2+ transporter protein BG04_5160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BG04_5160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BG04_5161 PF08220 DeoR-like helix-turn-helix domain BG04_5161 PF00455 DeoR C terminal sensor domain BG04_5162 PF05816 Toxic anion resistance protein (TelA) BG04_5163 PF14266 Putative component of 'biosynthetic module' BG04_5164 PF02342 TerD domain BG04_5165 PF02342 TerD domain BG04_5166 PF02342 TerD domain BG04_5167 PF00149 Calcineurin-like phosphoesterase BG04_5167 PF02872 5'-nucleotidase, C-terminal domain BG04_517 PF02386 Cation transport protein BG04_5170 PF12679 ABC-2 family transporter protein BG04_5171 PF00005 ABC transporter BG04_5173 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BG04_5173 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BG04_5174 PF00313 'Cold-shock' DNA-binding domain BG04_5175 PF00155 Aminotransferase class I and II BG04_5175 PF00392 Bacterial regulatory proteins, gntR family BG04_5176 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BG04_5176 PF00205 Thiamine pyrophosphate enzyme, central domain BG04_5176 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BG04_5177 PF00313 'Cold-shock' DNA-binding domain BG04_518 PF01220 Dehydroquinase class II BG04_5185 PF08240 Alcohol dehydrogenase GroES-like domain BG04_5185 PF00107 Zinc-binding dehydrogenase BG04_5186 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BG04_5186 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BG04_5187 PF00072 Response regulator receiver domain BG04_5187 PF04397 LytTr DNA-binding domain BG04_5188 PF04239 Protein of unknown function (DUF421) BG04_5189 PF07690 Major Facilitator Superfamily BG04_5190 PF01476 LysM domain BG04_5190 PF06725 3D domain BG04_5191 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BG04_5191 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BG04_5196 PF03575 Peptidase family S51 BG04_5198 PF08264 Anticodon-binding domain of tRNA BG04_5198 PF00133 tRNA synthetases class I (I, L, M and V) BG04_5199 PF01565 FAD binding domain BG04_5199 PF08031 Berberine and berberine like BG04_52 PF12823 Domain of unknown function (DUF3817) BG04_520 PF02558 Ketopantoate reductase PanE/ApbA BG04_520 PF08546 Ketopantoate reductase PanE/ApbA C terminal BG04_5204 PF07348 Syd protein (SUKH-2) BG04_521 PF01575 MaoC like domain BG04_5212 PF14431 YwqJ-like deaminase BG04_5212 PF04740 LXG domain of WXG superfamily BG04_5212 PF14449 Pre-toxin TG BG04_5213 PF01734 Patatin-like phospholipase BG04_5216 PF11975 Family 4 glycosyl hydrolase C-terminal domain BG04_5216 PF02056 Family 4 glycosyl hydrolase BG04_5217 PF02378 Phosphotransferase system, EIIC BG04_5218 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BG04_522 PF01144 Coenzyme A transferase BG04_5221 PF05163 DinB family BG04_5223 PF06039 Malate:quinone oxidoreductase (Mqo) BG04_523 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BG04_523 PF08501 Shikimate dehydrogenase substrate binding domain BG04_524 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BG04_524 PF08501 Shikimate dehydrogenase substrate binding domain BG04_5240 PF02056 Family 4 glycosyl hydrolase BG04_5240 PF11975 Family 4 glycosyl hydrolase C-terminal domain BG04_5248 PF00561 alpha/beta hydrolase fold BG04_5249 PF02595 Glycerate kinase family BG04_525 PF03466 LysR substrate binding domain BG04_525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_5250 PF02447 GntP family permease BG04_5251 PF17853 GGDEF-like domain BG04_5251 PF13556 PucR C-terminal helix-turn-helix domain BG04_5251 PF05651 Putative sugar diacid recognition BG04_5254 PF00753 Metallo-beta-lactamase superfamily BG04_5255 PF00465 Iron-containing alcohol dehydrogenase BG04_5256 PF05656 Protein of unknown function (DUF805) BG04_526 PF01494 FAD binding domain BG04_5272 PF00313 'Cold-shock' DNA-binding domain BG04_5273 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BG04_5275 PF16197 Ketoacyl-synthetase C-terminal extension BG04_5275 PF08240 Alcohol dehydrogenase GroES-like domain BG04_5275 PF00550 Phosphopantetheine attachment site BG04_5275 PF00698 Acyl transferase domain BG04_5275 PF00109 Beta-ketoacyl synthase, N-terminal domain BG04_5275 PF02801 Beta-ketoacyl synthase, C-terminal domain BG04_5275 PF14765 Polyketide synthase dehydratase BG04_5275 PF08659 KR domain BG04_5276 PF01914 MarC family integral membrane protein BG04_5281 PF00266 Aminotransferase class-V BG04_5282 PF01592 NifU-like N terminal domain BG04_5283 PF04443 Acyl-protein synthetase, LuxE BG04_5286 PF00501 AMP-binding enzyme BG04_5287 PF02627 Carboxymuconolactone decarboxylase family BG04_5288 PF00440 Bacterial regulatory proteins, tetR family BG04_529 PF07690 Major Facilitator Superfamily BG04_5293 PF13520 Amino acid permease BG04_5295 PF05525 Branched-chain amino acid transport protein BG04_5296 PF00216 Bacterial DNA-binding protein BG04_5299 PF03845 Spore germination protein BG04_530 PF01022 Bacterial regulatory protein, arsR family BG04_5301 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_5301 PF00512 His Kinase A (phospho-acceptor) domain BG04_5301 PF00672 HAMP domain BG04_5302 PF00486 Transcriptional regulatory protein, C terminal BG04_5302 PF00072 Response regulator receiver domain BG04_5304 PF00873 AcrB/AcrD/AcrF family BG04_531 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_531 PF03466 LysR substrate binding domain BG04_5310 PF00497 Bacterial extracellular solute-binding proteins, family 3 BG04_5311 PF00296 Luciferase-like monooxygenase BG04_5312 PF05656 Protein of unknown function (DUF805) BG04_5313 PF05656 Protein of unknown function (DUF805) BG04_5316 PF02293 AmiS/UreI family transporter BG04_5317 PF01773 Na+ dependent nucleoside transporter N-terminus BG04_5317 PF07662 Na+ dependent nucleoside transporter C-terminus BG04_5318 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BG04_5319 PF01791 DeoC/LacD family aldolase BG04_5320 PF00591 Glycosyl transferase family, a/b domain BG04_5320 PF02885 Glycosyl transferase family, helical bundle domain BG04_5320 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BG04_5322 PF04198 Putative sugar-binding domain BG04_5328 PF02660 Glycerol-3-phosphate acyltransferase BG04_533 PF07690 Major Facilitator Superfamily BG04_5330 PF03551 Transcriptional regulator PadR-like family BG04_5331 PF01435 Peptidase family M48 BG04_5332 PF00753 Metallo-beta-lactamase superfamily BG04_5333 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BG04_5334 PF01547 Bacterial extracellular solute-binding protein BG04_5335 PF00528 Binding-protein-dependent transport system inner membrane component BG04_5336 PF00528 Binding-protein-dependent transport system inner membrane component BG04_5337 PF00106 short chain dehydrogenase BG04_5338 PF02667 Short chain fatty acid transporter BG04_534 PF03466 LysR substrate binding domain BG04_534 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_5342 PF09587 Bacterial capsule synthesis protein PGA_cap BG04_5343 PF04143 Sulphur transport BG04_5346 PF00465 Iron-containing alcohol dehydrogenase BG04_5347 PF03466 LysR substrate binding domain BG04_5347 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_5351 PF07690 Major Facilitator Superfamily BG04_5358 PF00107 Zinc-binding dehydrogenase BG04_5358 PF08240 Alcohol dehydrogenase GroES-like domain BG04_5359 PF07729 FCD domain BG04_5359 PF00392 Bacterial regulatory proteins, gntR family BG04_5365 PF00999 Sodium/hydrogen exchanger family BG04_5367 PF03471 Transporter associated domain BG04_5367 PF01595 Cyclin M transmembrane N-terminal domain BG04_5367 PF00571 CBS domain BG04_5370 PF00005 ABC transporter BG04_5370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG04_5371 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG04_5371 PF00005 ABC transporter BG04_5372 PF00528 Binding-protein-dependent transport system inner membrane component BG04_5373 PF00528 Binding-protein-dependent transport system inner membrane component BG04_5374 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG04_5376 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BG04_5376 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BG04_5380 PF00565 Staphylococcal nuclease homologue BG04_5382 PF06039 Malate:quinone oxidoreductase (Mqo) BG04_5383 PF03618 Kinase/pyrophosphorylase BG04_5387 PF00924 Mechanosensitive ion channel BG04_5395 PF02073 Thermophilic metalloprotease (M29) BG04_5396 PF09339 IclR helix-turn-helix domain BG04_5396 PF01614 Bacterial transcriptional regulator BG04_5397 PF01557 Fumarylacetoacetate (FAA) hydrolase family BG04_5398 PF01274 Malate synthase BG04_5399 PF02913 FAD linked oxidases, C-terminal domain BG04_5399 PF01565 FAD binding domain BG04_54 PF01979 Amidohydrolase family BG04_5400 PF02754 Cysteine-rich domain BG04_5400 PF13183 4Fe-4S dicluster domain BG04_5401 PF02913 FAD linked oxidases, C-terminal domain BG04_5401 PF01565 FAD binding domain BG04_5402 PF02652 L-lactate permease BG04_5406 PF10997 Alternate to MurJ BG04_5407 PF12679 ABC-2 family transporter protein BG04_5408 PF00005 ABC transporter BG04_5408 PF13732 Domain of unknown function (DUF4162) BG04_5409 PF13396 Phospholipase_D-nuclease N-terminal BG04_5412 PF04542 Sigma-70 region 2 BG04_5412 PF08281 Sigma-70, region 4 BG04_5414 PF10676 Spore germination protein gerPA/gerPF BG04_5416 PF05360 yiaA/B two helix domain BG04_5418 PF12146 Serine aminopeptidase, S33 BG04_5419 PF00296 Luciferase-like monooxygenase BG04_542 PF07690 Major Facilitator Superfamily BG04_5420 PF01740 STAS domain BG04_5421 PF01544 CorA-like Mg2+ transporter protein BG04_5424 PF04239 Protein of unknown function (DUF421) BG04_5425 PF02557 D-alanyl-D-alanine carboxypeptidase BG04_5427 PF16736 Single Cache-like BG04_5427 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_5427 PF00512 His Kinase A (phospho-acceptor) domain BG04_5427 PF00989 PAS fold BG04_5428 PF00486 Transcriptional regulatory protein, C terminal BG04_5428 PF00072 Response regulator receiver domain BG04_5429 PF01494 FAD binding domain BG04_543 PF01261 Xylose isomerase-like TIM barrel BG04_5432 PF00364 Biotin-requiring enzyme BG04_5432 PF02817 e3 binding domain BG04_5432 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BG04_5433 PF02779 Transketolase, pyrimidine binding domain BG04_5433 PF16870 2-oxoglutarate dehydrogenase C-terminal BG04_5433 PF00676 Dehydrogenase E1 component BG04_5433 PF16078 2-oxoglutarate dehydrogenase N-terminus BG04_5435 PF07690 Major Facilitator Superfamily BG04_5436 PF02566 OsmC-like protein BG04_5438 PF04235 Protein of unknown function (DUF418) BG04_544 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BG04_544 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BG04_5445 PF00005 ABC transporter BG04_5446 PF00543 Nitrogen regulatory protein P-II BG04_5447 PF00909 Ammonium Transporter Family BG04_5448 PF03806 AbgT putative transporter family BG04_545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BG04_545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BG04_5451 PF00561 alpha/beta hydrolase fold BG04_5454 PF04229 GrpB protein BG04_5454 PF13673 Acetyltransferase (GNAT) domain BG04_5455 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BG04_5455 PF02770 Acyl-CoA dehydrogenase, middle domain BG04_5455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BG04_5458 PF10676 Spore germination protein gerPA/gerPF BG04_5459 PF10676 Spore germination protein gerPA/gerPF BG04_546 PF01261 Xylose isomerase-like TIM barrel BG04_5463 PF00005 ABC transporter BG04_5464 PF01032 FecCD transport family BG04_5465 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BG04_5465 PF07685 CobB/CobQ-like glutamine amidotransferase domain BG04_5467 PF13520 Amino acid permease BG04_547 PF00356 Bacterial regulatory proteins, lacI family BG04_5471 PF01380 SIS domain BG04_5473 PF00356 Bacterial regulatory proteins, lacI family BG04_5475 PF07690 Major Facilitator Superfamily BG04_5476 PF00294 pfkB family carbohydrate kinase BG04_548 PF00072 Response regulator receiver domain BG04_548 PF04397 LytTr DNA-binding domain BG04_5481 PF01593 Flavin containing amine oxidoreductase BG04_5482 PF00535 Glycosyl transferase family 2 BG04_5486 PF13386 Cytochrome C biogenesis protein transmembrane region BG04_5488 PF01774 UreD urease accessory protein BG04_5489 PF02492 CobW/HypB/UreG, nucleotide-binding domain BG04_549 PF09308 LuxQ, periplasmic BG04_549 PF00512 His Kinase A (phospho-acceptor) domain BG04_549 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_549 PF00072 Response regulator receiver domain BG04_5490 PF01730 UreF BG04_5491 PF02814 UreE urease accessory protein, N-terminal domain BG04_5491 PF05194 UreE urease accessory protein, C-terminal domain BG04_5492 PF00449 Urease alpha-subunit, N-terminal domain BG04_5492 PF01979 Amidohydrolase family BG04_5493 PF00699 Urease beta subunit BG04_5494 PF00547 Urease, gamma subunit BG04_5495 PF02885 Glycosyl transferase family, helical bundle domain BG04_5495 PF00591 Glycosyl transferase family, a/b domain BG04_5496 PF01476 LysM domain BG04_5496 PF00877 NlpC/P60 family BG04_5497 PF06725 3D domain BG04_5497 PF01476 LysM domain BG04_5498 PF00881 Nitroreductase family BG04_5499 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BG04_5500 PF09335 SNARE associated Golgi protein BG04_5502 PF01738 Dienelactone hydrolase family BG04_5503 PF00905 Penicillin binding protein transpeptidase domain BG04_5503 PF00912 Transglycosylase BG04_5504 PF01943 Polysaccharide biosynthesis protein BG04_5505 PF00892 EamA-like transporter family BG04_5506 PF00392 Bacterial regulatory proteins, gntR family BG04_5506 PF00155 Aminotransferase class I and II BG04_551 PF07875 Coat F domain BG04_5510 PF00664 ABC transporter transmembrane region BG04_5510 PF00005 ABC transporter BG04_5515 PF05908 Poly-gamma-glutamate hydrolase BG04_5518 PF00210 Ferritin-like domain BG04_552 PF00107 Zinc-binding dehydrogenase BG04_552 PF08240 Alcohol dehydrogenase GroES-like domain BG04_552 PF13823 Alcohol dehydrogenase GroES-associated BG04_5520 PF07875 Coat F domain BG04_5521 PF03471 Transporter associated domain BG04_5521 PF00571 CBS domain BG04_5521 PF01595 Cyclin M transmembrane N-terminal domain BG04_5524 PF00478 IMP dehydrogenase / GMP reductase domain BG04_5524 PF00571 CBS domain BG04_5525 PF10503 Esterase PHB depolymerase BG04_5526 PF01266 FAD dependent oxidoreductase BG04_5526 PF00355 Rieske [2Fe-2S] domain BG04_5528 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BG04_5529 PF01842 ACT domain BG04_5529 PF02153 Prephenate dehydrogenase BG04_5530 PF01264 Chorismate synthase BG04_5531 PF00793 DAHP synthetase I family BG04_5531 PF01817 Chorismate mutase type II BG04_5533 PF02417 Chromate transporter BG04_5534 PF02417 Chromate transporter BG04_5536 PF00266 Aminotransferase class-V BG04_5537 PF01546 Peptidase family M20/M25/M40 BG04_5538 PF17853 GGDEF-like domain BG04_5538 PF13556 PucR C-terminal helix-turn-helix domain BG04_5538 PF07905 Purine catabolism regulatory protein-like family BG04_5539 PF01910 Thiamine-binding protein BG04_554 PF07875 Coat F domain BG04_5540 PF00877 NlpC/P60 family BG04_5540 PF01476 LysM domain BG04_5541 PF00199 Catalase BG04_5541 PF06628 Catalase-related immune-responsive BG04_5544 PF00209 Sodium:neurotransmitter symporter family BG04_555 PF01740 STAS domain BG04_555 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BG04_5553 PF01925 Sulfite exporter TauE/SafE BG04_5554 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BG04_5555 PF10502 Signal peptidase, peptidase S26 BG04_5556 PF04101 Glycosyltransferase family 28 C-terminal domain BG04_5556 PF03033 Glycosyltransferase family 28 N-terminal domain BG04_5558 PF01022 Bacterial regulatory protein, arsR family BG04_5560 PF00881 Nitroreductase family BG04_5563 PF04229 GrpB protein BG04_5564 PF08239 Bacterial SH3 domain BG04_5564 PF01520 N-acetylmuramoyl-L-alanine amidase BG04_5565 PF00253 Ribosomal protein S14p/S29e BG04_5566 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BG04_5566 PF18277 AbrB C-terminal domain BG04_5567 PF05163 DinB family BG04_5568 PF05958 tRNA (Uracil-5-)-methyltransferase BG04_5568 PF01938 TRAM domain BG04_5571 PF02277 Phosphoribosyltransferase BG04_5572 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BG04_5572 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BG04_5575 PF07690 Major Facilitator Superfamily BG04_5576 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BG04_5576 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BG04_5577 PF00781 Diacylglycerol kinase catalytic domain BG04_5579 PF00285 Citrate synthase, C-terminal domain BG04_5580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_5580 PF03466 LysR substrate binding domain BG04_5581 PF00892 EamA-like transporter family BG04_5582 PF00155 Aminotransferase class I and II BG04_5582 PF00392 Bacterial regulatory proteins, gntR family BG04_5585 PF01740 STAS domain BG04_5585 PF13426 PAS domain BG04_5588 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BG04_5589 PF01638 HxlR-like helix-turn-helix BG04_5590 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BG04_5590 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BG04_5591 PF13610 DDE domain BG04_5592 PF13091 PLD-like domain BG04_5592 PF13396 Phospholipase_D-nuclease N-terminal BG04_5594 PF00239 Resolvase, N terminal domain BG04_5594 PF02796 Helix-turn-helix domain of resolvase BG04_5597 PF04239 Protein of unknown function (DUF421) BG04_5599 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BG04_56 PF03816 Cell envelope-related transcriptional attenuator domain BG04_560 PF00571 CBS domain BG04_5600 PF07451 Stage V sporulation protein AD (SpoVAD) BG04_5601 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BG04_5604 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BG04_5609 PF13333 Integrase core domain BG04_5609 PF00665 Integrase core domain BG04_5609 PF13276 HTH-like domain BG04_561 PF09557 Domain of unknown function (DUF2382) BG04_561 PF11181 Heat induced stress protein YflT BG04_5610 PF00067 Cytochrome P450 BG04_5613 PF00011 Hsp20/alpha crystallin family BG04_5615 PF01047 MarR family BG04_5616 PF02678 Pirin BG04_5616 PF05726 Pirin C-terminal cupin domain BG04_5617 PF08671 Anti-repressor SinI BG04_5617 PF01381 Helix-turn-helix BG04_5619 PF00239 Resolvase, N terminal domain BG04_5628 PF04232 Stage V sporulation protein S (SpoVS) BG04_5629 PF00216 Bacterial DNA-binding protein BG04_563 PF11181 Heat induced stress protein YflT BG04_5634 PF08281 Sigma-70, region 4 BG04_5634 PF04542 Sigma-70 region 2 BG04_5636 PF00665 Integrase core domain BG04_5636 PF13333 Integrase core domain BG04_5636 PF13276 HTH-like domain BG04_5642 PF00795 Carbon-nitrogen hydrolase BG04_5646 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BG04_5649 PF12697 Alpha/beta hydrolase family BG04_5651 PF00144 Beta-lactamase BG04_5653 PF08645 Polynucleotide kinase 3 phosphatase BG04_5654 PF00583 Acetyltransferase (GNAT) family BG04_5655 PF13333 Integrase core domain BG04_5655 PF13276 HTH-like domain BG04_5655 PF00665 Integrase core domain BG04_5668 PF00216 Bacterial DNA-binding protein BG04_5670 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BG04_5675 PF10924 Protein of unknown function (DUF2711) BG04_5677 PF01810 LysE type translocator BG04_5679 PF00082 Subtilase family BG04_5680 PF03412 Peptidase C39 family BG04_5680 PF00664 ABC transporter transmembrane region BG04_5680 PF00005 ABC transporter BG04_5686 PF01381 Helix-turn-helix BG04_5689 PF00005 ABC transporter BG04_569 PF03631 Virulence factor BrkB BG04_5690 PF00005 ABC transporter BG04_5692 PF12833 Helix-turn-helix domain BG04_5694 PF01209 ubiE/COQ5 methyltransferase family BG04_5695 PF00186 Dihydrofolate reductase BG04_5697 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BG04_5697 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BG04_5698 PF01553 Acyltransferase BG04_5699 PF07977 FabA-like domain BG04_57 PF13302 Acetyltransferase (GNAT) domain BG04_570 PF12795 Mechanosensitive ion channel porin domain BG04_570 PF12794 Mechanosensitive ion channel inner membrane domain 1 BG04_570 PF00924 Mechanosensitive ion channel BG04_5702 PF02463 RecF/RecN/SMC N terminal domain BG04_5703 PF00580 UvrD/REP helicase N-terminal domain BG04_5703 PF13361 UvrD-like helicase C-terminal domain BG04_5705 PF02811 PHP domain BG04_5705 PF11490 DNA polymerase III polC-type N-terminus II BG04_5705 PF07733 Bacterial DNA polymerase III alpha NTPase domain BG04_5705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BG04_5705 PF14579 Helix-hairpin-helix motif BG04_5705 PF00929 Exonuclease BG04_5707 PF11798 IMS family HHH motif BG04_5707 PF11799 impB/mucB/samB family C-terminal domain BG04_5707 PF00817 impB/mucB/samB family BG04_5711 PF00269 Small, acid-soluble spore proteins, alpha/beta type BG04_5713 PF01580 FtsK/SpoIIIE family BG04_5713 PF09397 Ftsk gamma domain BG04_5713 PF17854 FtsK alpha domain BG04_572 PF01545 Cation efflux family BG04_572 PF16916 Dimerisation domain of Zinc Transporter BG04_5723 PF00989 PAS fold BG04_5723 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_5723 PF00512 His Kinase A (phospho-acceptor) domain BG04_5723 PF08447 PAS fold BG04_5724 PF00196 Bacterial regulatory proteins, luxR family BG04_5724 PF00072 Response regulator receiver domain BG04_5735 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BG04_5735 PF01348 Type II intron maturase BG04_5743 PF00877 NlpC/P60 family BG04_5758 PF02899 Phage integrase, N-terminal SAM-like domain BG04_5758 PF00589 Phage integrase family BG04_5759 PF02899 Phage integrase, N-terminal SAM-like domain BG04_5759 PF00589 Phage integrase family BG04_5761 PF03734 L,D-transpeptidase catalytic domain BG04_5764 PF00216 Bacterial DNA-binding protein BG04_5765 PF00269 Small, acid-soluble spore proteins, alpha/beta type BG04_5769 PF01740 STAS domain BG04_5769 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BG04_5778 PF00011 Hsp20/alpha crystallin family BG04_5780 PF01047 MarR family BG04_5781 PF02678 Pirin BG04_5781 PF05726 Pirin C-terminal cupin domain BG04_5782 PF01381 Helix-turn-helix BG04_5782 PF08671 Anti-repressor SinI BG04_5784 PF00239 Resolvase, N terminal domain BG04_579 PF17094 Uncharacterised protein family (UPF0715) BG04_5792 PF03845 Spore germination protein BG04_5793 PF03845 Spore germination protein BG04_5794 PF05504 Spore germination B3/ GerAC like, C-terminal BG04_5795 PF03323 Bacillus/Clostridium GerA spore germination protein BG04_5798 PF09844 Uncharacterized conserved protein (COG2071) BG04_5799 PF01645 Conserved region in glutamate synthase BG04_5799 PF13187 4Fe-4S dicluster domain BG04_5801 PF00171 Aldehyde dehydrogenase family BG04_5802 PF00701 Dihydrodipicolinate synthetase family BG04_5803 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG04_5803 PF04324 BFD-like [2Fe-2S] binding domain BG04_5805 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG04_5805 PF04324 BFD-like [2Fe-2S] binding domain BG04_5806 PF00158 Sigma-54 interaction domain BG04_5806 PF02954 Bacterial regulatory protein, Fis family BG04_5806 PF13426 PAS domain BG04_5807 PF01266 FAD dependent oxidoreductase BG04_5808 PF05544 Proline racemase BG04_5809 PF05544 Proline racemase BG04_581 PF07690 Major Facilitator Superfamily BG04_5810 PF13520 Amino acid permease BG04_5813 PF00239 Resolvase, N terminal domain BG04_5813 PF02796 Helix-turn-helix domain of resolvase BG04_5817 PF00892 EamA-like transporter family BG04_5818 PF00155 Aminotransferase class I and II BG04_5818 PF00392 Bacterial regulatory proteins, gntR family BG04_582 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BG04_582 PF13378 Enolase C-terminal domain-like BG04_5821 PF18277 AbrB C-terminal domain BG04_5821 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BG04_5824 PF03734 L,D-transpeptidase catalytic domain BG04_5829 PF02899 Phage integrase, N-terminal SAM-like domain BG04_5829 PF00589 Phage integrase family BG04_5832 PF13154 Protein of unknown function (DUF3991) BG04_5834 PF18840 Large polyvalent protein associated domain 25 BG04_584 PF00294 pfkB family carbohydrate kinase BG04_5846 PF06271 RDD family BG04_585 PF09339 IclR helix-turn-helix domain BG04_585 PF01614 Bacterial transcriptional regulator BG04_5852 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BG04_5853 PF00269 Small, acid-soluble spore proteins, alpha/beta type BG04_5857 PF03772 Competence protein BG04_5857 PF13567 Domain of unknown function (DUF4131) BG04_5857 PF00753 Metallo-beta-lactamase superfamily BG04_5860 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BG04_5860 PF18277 AbrB C-terminal domain BG04_587 PF01061 ABC-2 type transporter BG04_5876 PF17094 Uncharacterised protein family (UPF0715) BG04_588 PF13732 Domain of unknown function (DUF4162) BG04_588 PF00005 ABC transporter BG04_5882 PF01588 Putative tRNA binding domain BG04_5884 PF03845 Spore germination protein BG04_5886 PF07883 Cupin domain BG04_5886 PF01381 Helix-turn-helix BG04_5887 PF01810 LysE type translocator BG04_5891 PF08240 Alcohol dehydrogenase GroES-like domain BG04_5891 PF00107 Zinc-binding dehydrogenase BG04_5892 PF00269 Small, acid-soluble spore proteins, alpha/beta type BG04_5893 PF02028 BCCT, betaine/carnitine/choline family transporter BG04_5894 PF00216 Bacterial DNA-binding protein BG04_59 PF02673 Bacitracin resistance protein BacA BG04_5901 PF01047 MarR family BG04_5903 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BG04_5905 PF02743 Cache domain BG04_5905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG04_5905 PF00672 HAMP domain BG04_5906 PF00199 Catalase BG04_5906 PF06628 Catalase-related immune-responsive BG04_5907 PF01717 Cobalamin-independent synthase, Catalytic domain BG04_5909 PF01580 FtsK/SpoIIIE family BG04_5909 PF09397 Ftsk gamma domain BG04_5909 PF17854 FtsK alpha domain BG04_5915 PF07690 Major Facilitator Superfamily BG04_5916 PF00356 Bacterial regulatory proteins, lacI family BG04_5917 PF00701 Dihydrodipicolinate synthetase family BG04_5919 PF03458 UPF0126 domain BG04_5920 PF03449 Transcription elongation factor, N-terminal BG04_5920 PF01272 Transcription elongation factor, GreA/GreB, C-term BG04_5921 PF06719 AraC-type transcriptional regulator N-terminus BG04_5921 PF12833 Helix-turn-helix domain BG04_5922 PF00248 Aldo/keto reductase family BG04_5925 PF00665 Integrase core domain BG04_5925 PF13333 Integrase core domain BG04_5925 PF13276 HTH-like domain BG04_5926 PF01638 HxlR-like helix-turn-helix BG04_5928 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BG04_5928 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BG04_5929 PF01638 HxlR-like helix-turn-helix BG04_5930 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BG04_5931 PF01380 SIS domain BG04_5932 PF00106 short chain dehydrogenase BG04_5934 PF00171 Aldehyde dehydrogenase family BG04_5935 PF00742 Homoserine dehydrogenase BG04_5935 PF03447 Homoserine dehydrogenase, NAD binding domain BG04_5936 PF01546 Peptidase family M20/M25/M40 BG04_5936 PF07687 Peptidase dimerisation domain BG04_5937 PF01053 Cys/Met metabolism PLP-dependent enzyme BG04_5938 PF02423 Ornithine cyclodeaminase/mu-crystallin family BG04_5939 PF01321 Creatinase/Prolidase N-terminal domain BG04_5939 PF00557 Metallopeptidase family M24 BG04_5940 PF01680 SOR/SNZ family BG04_5941 PF00291 Pyridoxal-phosphate dependent enzyme BG04_5942 PF17853 GGDEF-like domain BG04_5942 PF07905 Purine catabolism regulatory protein-like family BG04_5942 PF13556 PucR C-terminal helix-turn-helix domain BG04_5943 PF13649 Methyltransferase domain BG04_5944 PF00664 ABC transporter transmembrane region BG04_5944 PF00005 ABC transporter BG04_5946 PF01032 FecCD transport family BG04_5947 PF01032 FecCD transport family BG04_5948 PF00005 ABC transporter BG04_5952 PF00005 ABC transporter BG04_5952 PF13732 Domain of unknown function (DUF4162) BG04_5953 PF00440 Bacterial regulatory proteins, tetR family BG04_5953 PF13977 BetI-type transcriptional repressor, C-terminal BG04_596 PF10502 Signal peptidase, peptidase S26 BG04_5965 PF13333 Integrase core domain BG04_5965 PF13276 HTH-like domain BG04_5965 PF00665 Integrase core domain BG04_5967 PF01580 FtsK/SpoIIIE family BG04_5967 PF09397 Ftsk gamma domain BG04_5967 PF17854 FtsK alpha domain BG04_5969 PF05675 Protein of unknown function (DUF817) BG04_597 PF07883 Cupin domain BG04_597 PF01381 Helix-turn-helix BG04_5970 PF13443 Cro/C1-type HTH DNA-binding domain BG04_5971 PF11188 Protein of unknown function (DUF2975) BG04_5972 PF00107 Zinc-binding dehydrogenase BG04_5972 PF08240 Alcohol dehydrogenase GroES-like domain BG04_5978 PF11181 Heat induced stress protein YflT BG04_5979 PF00205 Thiamine pyrophosphate enzyme, central domain BG04_5979 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BG04_5979 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BG04_598 PF01810 LysE type translocator BG04_5980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_5980 PF00512 His Kinase A (phospho-acceptor) domain BG04_5980 PF13188 PAS domain BG04_5980 PF13426 PAS domain BG04_5980 PF00989 PAS fold BG04_5983 PF01695 IstB-like ATP binding protein BG04_5984 PF00665 Integrase core domain BG04_5987 PF03960 ArsC family BG04_5989 PF00082 Subtilase family BG04_5989 PF05922 Peptidase inhibitor I9 BG04_599 PF13673 Acetyltransferase (GNAT) domain BG04_599 PF04229 GrpB protein BG04_5993 PF13333 Integrase core domain BG04_5993 PF00665 Integrase core domain BG04_5993 PF13276 HTH-like domain BG04_5994 PF07486 Cell Wall Hydrolase BG04_5996 PF07690 Major Facilitator Superfamily BG04_5997 PF00005 ABC transporter BG04_5998 PF08241 Methyltransferase domain BG04_6 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BG04_6 PF01740 STAS domain BG04_6002 PF07690 Major Facilitator Superfamily BG04_6008 PF17841 BID domain of Bartonella effector protein (Bep) BG04_6008 PF03389 MobA/MobL family BG04_6008 PF01443 Viral (Superfamily 1) RNA helicase BG04_6010 PF07486 Cell Wall Hydrolase BG04_6028 PF01446 Replication protein BG04_604 PF00561 alpha/beta hydrolase fold BG04_606 PF00857 Isochorismatase family BG04_607 PF03358 NADPH-dependent FMN reductase BG04_608 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG04_609 PF07681 DoxX BG04_61 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BG04_614 PF00294 pfkB family carbohydrate kinase BG04_615 PF00005 ABC transporter BG04_616 PF00528 Binding-protein-dependent transport system inner membrane component BG04_617 PF00497 Bacterial extracellular solute-binding proteins, family 3 BG04_618 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BG04_618 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BG04_619 PF01380 SIS domain BG04_62 PF00510 Cytochrome c oxidase subunit III BG04_620 PF03600 Citrate transporter BG04_622 PF07690 Major Facilitator Superfamily BG04_624 PF07690 Major Facilitator Superfamily BG04_625 PF00440 Bacterial regulatory proteins, tetR family BG04_63 PF00115 Cytochrome C and Quinol oxidase polypeptide I BG04_630 PF00155 Aminotransferase class I and II BG04_631 PF00561 alpha/beta hydrolase fold BG04_632 PF13649 Methyltransferase domain BG04_633 PF02378 Phosphotransferase system, EIIC BG04_633 PF00367 phosphotransferase system, EIIB BG04_634 PF13580 SIS domain BG04_635 PF01978 Sugar-specific transcriptional regulator TrmB BG04_635 PF11495 Archaeal transcriptional regulator TrmB BG04_636 PF00892 EamA-like transporter family BG04_637 PF00561 alpha/beta hydrolase fold BG04_639 PF00465 Iron-containing alcohol dehydrogenase BG04_64 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BG04_640 PF00583 Acetyltransferase (GNAT) family BG04_649 PF02517 CPBP intramembrane metalloprotease BG04_652 PF17763 Glutaminase/Asparaginase C-terminal domain BG04_652 PF00710 Asparaginase, N-terminal BG04_656 PF03551 Transcriptional regulator PadR-like family BG04_658 PF03466 LysR substrate binding domain BG04_658 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_659 PF07690 Major Facilitator Superfamily BG04_660 PF14145 YrhK-like protein BG04_661 PF11181 Heat induced stress protein YflT BG04_661 PF09557 Domain of unknown function (DUF2382) BG04_662 PF10710 Protein of unknown function (DUF2512) BG04_663 PF00390 Malic enzyme, N-terminal domain BG04_663 PF03949 Malic enzyme, NAD binding domain BG04_675 PF00269 Small, acid-soluble spore proteins, alpha/beta type BG04_678 PF01674 Lipase (class 2) BG04_679 PF00893 Small Multidrug Resistance protein BG04_680 PF17314 Family of unknown function (DUF5360) BG04_681 PF00251 Glycosyl hydrolases family 32 N-terminal domain BG04_681 PF08244 Glycosyl hydrolases family 32 C terminal BG04_683 PF00356 Bacterial regulatory proteins, lacI family BG04_684 PF01306 LacY proton/sugar symporter BG04_685 PF03323 Bacillus/Clostridium GerA spore germination protein BG04_686 PF05504 Spore germination B3/ GerAC like, C-terminal BG04_687 PF03845 Spore germination protein BG04_689 PF03845 Spore germination protein BG04_690 PF13411 MerR HTH family regulatory protein BG04_696 PF00269 Small, acid-soluble spore proteins, alpha/beta type BG04_697 PF11553 Protein of unknown function (DUF3231) BG04_699 PF12867 DinB superfamily BG04_7 PF04226 Transglycosylase associated protein BG04_701 PF12833 Helix-turn-helix domain BG04_701 PF06445 GyrI-like small molecule binding domain BG04_703 PF02659 Putative manganese efflux pump BG04_704 PF06803 Protein of unknown function (DUF1232) BG04_709 PF13276 HTH-like domain BG04_709 PF00665 Integrase core domain BG04_709 PF13333 Integrase core domain BG04_71 PF01022 Bacterial regulatory protein, arsR family BG04_710 PF00994 Probable molybdopterin binding domain BG04_710 PF03454 MoeA C-terminal region (domain IV) BG04_710 PF03453 MoeA N-terminal region (domain I and II) BG04_711 PF01967 MoaC family BG04_712 PF00994 Probable molybdopterin binding domain BG04_713 PF00174 Oxidoreductase molybdopterin binding domain BG04_715 PF14172 Domain of unknown function (DUF4309) BG04_718 PF04303 PrpF protein BG04_719 PF03466 LysR substrate binding domain BG04_719 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_72 PF00403 Heavy-metal-associated domain BG04_720 PF03600 Citrate transporter BG04_724 PF01027 Inhibitor of apoptosis-promoting Bax1 BG04_725 PF00574 Clp protease BG04_728 PF00877 NlpC/P60 family BG04_729 PF07690 Major Facilitator Superfamily BG04_73 PF08241 Methyltransferase domain BG04_730 PF01047 MarR family BG04_732 PF04542 Sigma-70 region 2 BG04_732 PF08281 Sigma-70, region 4 BG04_734 PF00313 'Cold-shock' DNA-binding domain BG04_738 PF00324 Amino acid permease BG04_739 PF00324 Amino acid permease BG04_740 PF00171 Aldehyde dehydrogenase family BG04_741 PF01619 Proline dehydrogenase BG04_742 PF09234 Domain of unknown function (DUF1963) BG04_746 PF07454 Stage II sporulation protein P (SpoIIP) BG04_748 PF03707 Bacterial signalling protein N terminal repeat BG04_748 PF00990 Diguanylate cyclase, GGDEF domain BG04_748 PF00563 EAL domain BG04_749 PF01522 Polysaccharide deacetylase BG04_753 PF00210 Ferritin-like domain BG04_756 PF10057 Uncharacterized conserved protein (DUF2294) BG04_757 PF06146 Phosphate-starvation-inducible E BG04_758 PF00248 Aldo/keto reductase family BG04_76 PF05036 Sporulation related domain BG04_76 PF01520 N-acetylmuramoyl-L-alanine amidase BG04_767 PF13411 MerR HTH family regulatory protein BG04_768 PF00248 Aldo/keto reductase family BG04_77 PF01810 LysE type translocator BG04_770 PF13411 MerR HTH family regulatory protein BG04_775 PF08244 Glycosyl hydrolases family 32 C terminal BG04_775 PF00251 Glycosyl hydrolases family 32 N-terminal domain BG04_776 PF12732 YtxH-like protein BG04_78 PF13520 Amino acid permease BG04_781 PF01734 Patatin-like phospholipase BG04_782 PF02687 FtsX-like permease family BG04_783 PF00005 ABC transporter BG04_785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_786 PF00072 Response regulator receiver domain BG04_786 PF00486 Transcriptional regulatory protein, C terminal BG04_789 PF02583 Metal-sensitive transcriptional repressor BG04_790 PF14040 Deoxyribonuclease NucA/NucB BG04_791 PF11033 Competence protein J (ComJ) BG04_792 PF13538 UvrD-like helicase C-terminal domain BG04_794 PF00378 Enoyl-CoA hydratase/isomerase BG04_795 PF01638 HxlR-like helix-turn-helix BG04_798 PF00067 Cytochrome P450 BG04_799 PF07681 DoxX BG04_800 PF00535 Glycosyl transferase family 2 BG04_801 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BG04_801 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BG04_801 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BG04_802 PF00535 Glycosyl transferase family 2 BG04_806 PF01476 LysM domain BG04_806 PF00877 NlpC/P60 family BG04_807 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG04_808 PF01047 MarR family BG04_809 PF11738 Protein of unknown function (DUF3298) BG04_809 PF13739 Deacetylase PdaC BG04_81 PF04203 Sortase domain BG04_810 PF08281 Sigma-70, region 4 BG04_810 PF04542 Sigma-70 region 2 BG04_811 PF03845 Spore germination protein BG04_812 PF11738 Protein of unknown function (DUF3298) BG04_812 PF01522 Polysaccharide deacetylase BG04_812 PF13739 Deacetylase PdaC BG04_815 PF00324 Amino acid permease BG04_816 PF00491 Arginase family BG04_819 PF02386 Cation transport protein BG04_82 PF01925 Sulfite exporter TauE/SafE BG04_820 PF02254 TrkA-N domain BG04_820 PF02080 TrkA-C domain BG04_822 PF01037 Lrp/AsnC ligand binding domain BG04_824 PF13180 PDZ domain BG04_825 PF00072 Response regulator receiver domain BG04_825 PF00486 Transcriptional regulatory protein, C terminal BG04_826 PF00512 His Kinase A (phospho-acceptor) domain BG04_826 PF00672 HAMP domain BG04_826 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_827 PF00291 Pyridoxal-phosphate dependent enzyme BG04_828 PF03061 Thioesterase superfamily BG04_829 PF00392 Bacterial regulatory proteins, gntR family BG04_829 PF07729 FCD domain BG04_83 PF13302 Acetyltransferase (GNAT) domain BG04_830 PF13536 Putative multidrug resistance efflux transporter BG04_831 PF05076 Suppressor of fused protein (SUFU) BG04_832 PF00557 Metallopeptidase family M24 BG04_832 PF01321 Creatinase/Prolidase N-terminal domain BG04_834 PF03816 Cell envelope-related transcriptional attenuator domain BG04_836 PF02525 Flavodoxin-like fold BG04_837 PF09529 Integral membrane protein (intg_mem_TP0381) BG04_838 PF00528 Binding-protein-dependent transport system inner membrane component BG04_839 PF00571 CBS domain BG04_839 PF00005 ABC transporter BG04_84 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BG04_843 PF07690 Major Facilitator Superfamily BG04_844 PF00440 Bacterial regulatory proteins, tetR family BG04_845 PF00528 Binding-protein-dependent transport system inner membrane component BG04_846 PF00528 Binding-protein-dependent transport system inner membrane component BG04_847 PF01547 Bacterial extracellular solute-binding protein BG04_849 PF00356 Bacterial regulatory proteins, lacI family BG04_850 PF00512 His Kinase A (phospho-acceptor) domain BG04_850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_851 PF01925 Sulfite exporter TauE/SafE BG04_852 PF00375 Sodium:dicarboxylate symporter family BG04_854 PF03060 Nitronate monooxygenase BG04_859 PF03816 Cell envelope-related transcriptional attenuator domain BG04_86 PF16884 N-terminal domain of oxidoreductase BG04_86 PF00107 Zinc-binding dehydrogenase BG04_860 PF00884 Sulfatase BG04_862 PF00892 EamA-like transporter family BG04_863 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BG04_864 PF17961 Bacterial Ig domain BG04_864 PF00746 LPXTG cell wall anchor motif BG04_864 PF17210 SdrD B-like domain BG04_864 PF04650 YSIRK type signal peptide BG04_864 PF10425 C-terminus of bacterial fibrinogen-binding adhesin BG04_867 PF00324 Amino acid permease BG04_868 PF05684 Protein of unknown function (DUF819) BG04_869 PF00440 Bacterial regulatory proteins, tetR family BG04_871 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG04_871 PF03466 LysR substrate binding domain BG04_872 PF01925 Sulfite exporter TauE/SafE BG04_873 PF00583 Acetyltransferase (GNAT) family BG04_874 PF13460 NAD(P)H-binding BG04_875 PF02308 MgtC family BG04_876 PF01209 ubiE/COQ5 methyltransferase family BG04_877 PF05908 Poly-gamma-glutamate hydrolase BG04_879 PF00155 Aminotransferase class I and II BG04_879 PF00392 Bacterial regulatory proteins, gntR family BG04_882 PF00324 Amino acid permease BG04_888 PF00535 Glycosyl transferase family 2 BG04_893 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG04_897 PF01810 LysE type translocator BG04_898 PF01235 Sodium:alanine symporter family BG04_9 PF00206 Lyase BG04_9 PF10415 Fumarase C C-terminus BG04_900 PF01758 Sodium Bile acid symporter family BG04_901 PF00924 Mechanosensitive ion channel BG04_902 PF00188 Cysteine-rich secretory protein family BG04_903 PF01595 Cyclin M transmembrane N-terminal domain BG04_903 PF03471 Transporter associated domain BG04_903 PF00571 CBS domain BG04_904 PF02146 Sir2 family BG04_905 PF00582 Universal stress protein family BG04_907 PF00365 Phosphofructokinase BG04_908 PF01476 LysM domain BG04_908 PF00877 NlpC/P60 family BG04_91 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BG04_91 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BG04_912 PF01894 Uncharacterised protein family UPF0047 BG04_913 PF03323 Bacillus/Clostridium GerA spore germination protein BG04_914 PF03845 Spore germination protein BG04_915 PF05504 Spore germination B3/ GerAC like, C-terminal BG04_919 PF00005 ABC transporter BG04_922 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BG04_922 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BG04_925 PF03009 Glycerophosphoryl diester phosphodiesterase family BG04_927 PF00005 ABC transporter BG04_932 PF02378 Phosphotransferase system, EIIC BG04_932 PF00367 phosphotransferase system, EIIB BG04_933 PF03123 CAT RNA binding domain BG04_933 PF00874 PRD domain BG04_934 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BG04_935 PF02525 Flavodoxin-like fold BG04_938 PF01098 Cell cycle protein BG04_939 PF01740 STAS domain BG04_939 PF00916 Sulfate permease family BG04_94 PF02600 Disulfide bond formation protein DsbB BG04_940 PF01048 Phosphorylase superfamily BG04_942 PF14191 YodL-like BG04_943 PF01569 PAP2 superfamily BG04_945 PF07070 SpoOM protein BG04_946 PF00069 Protein kinase domain BG04_946 PF03793 PASTA domain BG04_947 PF10720 Protein of unknown function (DUF2515) BG04_948 PF14162 YozD-like protein BG04_95 PF13462 Thioredoxin BG04_950 PF06855 YozE SAM-like fold BG04_951 PF01757 Acyltransferase family BG04_952 PF01063 Amino-transferase class IV BG04_953 PF14122 YokU-like protein, putative antitoxin BG04_954 PF12544 Lysine-2,3-aminomutase BG04_955 PF00583 Acetyltransferase (GNAT) family BG04_956 PF07687 Peptidase dimerisation domain BG04_956 PF01546 Peptidase family M20/M25/M40 BG04_957 PF01144 Coenzyme A transferase BG04_958 PF01144 Coenzyme A transferase BG04_959 PF00202 Aminotransferase class-III BG04_96 PF01435 Peptidase family M48 BG04_960 PF00375 Sodium:dicarboxylate symporter family BG04_962 PF00989 PAS fold BG04_962 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_962 PF08447 PAS fold BG04_962 PF00512 His Kinase A (phospho-acceptor) domain BG04_968 PF13472 GDSL-like Lipase/Acylhydrolase family BG04_969 PF02630 SCO1/SenC BG04_972 PF02645 Uncharacterised protein, DegV family COG1307 BG04_973 PF10751 Protein of unknown function (DUF2535) BG04_974 PF00585 C-terminal regulatory domain of Threonine dehydratase BG04_974 PF00291 Pyridoxal-phosphate dependent enzyme BG04_976 PF00186 Dihydrofolate reductase BG04_977 PF00303 Thymidylate synthase BG04_978 PF00551 Formyl transferase BG04_978 PF01842 ACT domain BG04_980 PF04183 IucA / IucC family BG04_980 PF06276 Ferric iron reductase FhuF-like transporter BG04_983 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BG04_985 PF06276 Ferric iron reductase FhuF-like transporter BG04_985 PF04183 IucA / IucC family BG04_986 PF00282 Pyridoxal-dependent decarboxylase conserved domain BG04_987 PF00202 Aminotransferase class-III BG04_988 PF03932 CutC family BG04_990 PF00875 DNA photolyase BG04_990 PF03441 FAD binding domain of DNA photolyase BG04_991 PF00989 PAS fold BG04_991 PF00512 His Kinase A (phospho-acceptor) domain BG04_991 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG04_995 PF00171 Aldehyde dehydrogenase family BG04_996 PF00158 Sigma-54 interaction domain BG04_997 PF00202 Aminotransferase class-III BG04_998 PF11084 Protein of unknown function (DUF2621) BG04_999 PF07301 Protein of unknown function (DUF1453)