BG04_10 SM00870 BG04_10 BG04_1003 SM00382 ATPases associated with a variety of cellular activities BG04_1004 SM00382 ATPases associated with a variety of cellular activities BG04_1007 SM00861 Transketolase, pyrimidine binding domain BG04_1009 SM00857 Resolvase, N terminal domain BG04_1015 SM00257 Lysin motif BG04_1015 SM00646 BG04_1015 BG04_1016 SM01230 BG04_1016 BG04_1017 SM00422 helix_turn_helix, mercury resistance BG04_1021 SM00382 ATPases associated with a variety of cellular activities BG04_1024 SM00853 MutL C terminal dimerisation domain BG04_1024 SM01340 BG04_1024 BG04_1025 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BG04_1025 SM00534 ATPase domain of DNA mismatch repair MUTS family BG04_1029 SM00729 Elongator protein 3, MiaB family, Radical SAM BG04_1035 SM00322 K homology RNA-binding domain BG04_1035 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG04_1036 SM00382 ATPases associated with a variety of cellular activities BG04_1037 SM00852 Probable molybdopterin binding domain BG04_1039 SM00530 Helix-turn-helix XRE-family like proteins BG04_1047 SM00382 ATPases associated with a variety of cellular activities BG04_1049 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_1049 SM00866 BG04_1049 BG04_1050 SM00382 ATPases associated with a variety of cellular activities BG04_1050 SM00843 BG04_1050 BG04_1053 SM00849 Metallo-beta-lactamase superfamily BG04_1054 SM01130 BG04_1054 BG04_1056 SM00859 Semialdehyde dehydrogenase, NAD binding domain BG04_1062 SM00316 Ribosomal protein S1-like RNA-binding domain BG04_1062 SM00322 K homology RNA-binding domain BG04_1063 SM01387 BG04_1063 BG04_1064 SM00904 Riboflavin kinase BG04_1071 SM00316 Ribosomal protein S1-like RNA-binding domain BG04_1071 SM00322 K homology RNA-binding domain BG04_1073 SM00479 BG04_1073 BG04_1073 SM00481 DNA polymerase alpha chain like domain BG04_1075 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG04_1086 SM00260 Two component signalling adaptor domain BG04_1087 SM00073 Histidine Phosphotransfer domain BG04_1087 SM00260 Two component signalling adaptor domain BG04_1087 SM00387 Histidine kinase-like ATPases BG04_1087 SM01231 BG04_1087 BG04_1088 SM00448 cheY-homologous receiver domain BG04_109 SM00357 Cold shock protein domain BG04_1090 SM00382 ATPases associated with a variety of cellular activities BG04_1090 SM00962 SRP54-type protein, GTPase domain BG04_1097 SM00448 cheY-homologous receiver domain BG04_11 SM00530 Helix-turn-helix XRE-family like proteins BG04_1107 SM00382 ATPases associated with a variety of cellular activities BG04_1115 SM00382 ATPases associated with a variety of cellular activities BG04_1115 SM01086 C-terminal, D2-small domain, of ClpB protein BG04_1119 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BG04_1119 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BG04_1119 SM00493 BG04_1119 BG04_1121 SM00881 CoA binding domain BG04_1132 SM00382 ATPases associated with a variety of cellular activities BG04_1132 SM00962 SRP54-type protein, GTPase domain BG04_1132 SM00963 SRP54-type protein, helical bundle domain BG04_1134 SM00382 ATPases associated with a variety of cellular activities BG04_1134 SM00962 SRP54-type protein, GTPase domain BG04_1134 SM00963 SRP54-type protein, helical bundle domain BG04_1135 SM00968 SMC proteins Flexible Hinge Domain BG04_1136 SM00358 Double-stranded RNA binding motif BG04_1136 SM00535 Ribonuclease III family BG04_1138 SM00822 BG04_1138 BG04_1139 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BG04_1142 SM00487 DEAD-like helicases superfamily BG04_1142 SM00490 helicase superfamily c-terminal domain BG04_1146 SM01120 BG04_1146 BG04_1146 SM01121 BG04_1146 BG04_1149 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BG04_1152 SM00220 Serine/Threonine protein kinases, catalytic domain BG04_1152 SM00740 BG04_1152 BG04_1153 SM00331 Sigma factor PP2C-like phosphatases BG04_1153 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BG04_1158 SM00487 DEAD-like helicases superfamily BG04_1158 SM00490 helicase superfamily c-terminal domain BG04_1160 SM01409 BG04_1160 BG04_1161 SM00072 Guanylate kinase homologues. BG04_1165 SM00831 Cation transporter/ATPase, N-terminus BG04_1168 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BG04_1171 SM00851 MGS-like domain BG04_1171 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BG04_1172 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BG04_1177 SM00363 S4 RNA-binding domain BG04_1182 SM00363 S4 RNA-binding domain BG04_1191 SM00864 Tubulin/FtsZ family, GTPase domain BG04_1191 SM00865 Tubulin/FtsZ family, C-terminal domain BG04_1192 SM00842 Cell division protein FtsA BG04_1199 SM00740 BG04_1199 BG04_120 SM00382 ATPases associated with a variety of cellular activities BG04_1200 SM00740 BG04_1200 BG04_1208 SM00878 Biotin carboxylase C-terminal domain BG04_1215 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG04_123 SM00257 Lysin motif BG04_1232 SM00914 BG04_1232 BG04_1233 SM00028 Tetratricopeptide repeats BG04_1245 SM00138 Methyltransferase, chemotaxis proteins BG04_1246 SM00562 BG04_1246 BG04_1252 SM00411 bacterial (prokaryotic) histone like domain BG04_1261 SM01240 BG04_1261 BG04_1262 SM00316 Ribosomal protein S1-like RNA-binding domain BG04_1263 SM00563 Phosphate acyltransferases BG04_127 SM00829 Enoylreductase BG04_1270 SM00870 BG04_1270 BG04_1272 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BG04_1274 SM00422 helix_turn_helix, mercury resistance BG04_1279 SM00487 DEAD-like helicases superfamily BG04_1279 SM00490 helicase superfamily c-terminal domain BG04_128 SM00829 Enoylreductase BG04_1284 SM00257 Lysin motif BG04_1285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_1285 SM00387 Histidine kinase-like ATPases BG04_1285 SM00388 His Kinase A (phosphoacceptor) domain BG04_1286 SM00448 cheY-homologous receiver domain BG04_1286 SM00862 Transcriptional regulatory protein, C terminal BG04_1290 SM00363 S4 RNA-binding domain BG04_1309 SM00387 Histidine kinase-like ATPases BG04_1311 SM00936 Penicillin-binding protein 5, C-terminal domain BG04_1322 SM00882 Coenzyme A transferase BG04_1323 SM00882 Coenzyme A transferase BG04_1328 SM00704 CDGSH-type zinc finger. Function unknown. BG04_1330 SM00849 Metallo-beta-lactamase superfamily BG04_1348 SM00382 ATPases associated with a variety of cellular activities BG04_1350 SM00062 Bacterial periplasmic substrate-binding proteins BG04_1350 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG04_1356 SM00861 Transketolase, pyrimidine binding domain BG04_1360 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BG04_1362 SM00091 PAS domain BG04_1362 SM00382 ATPases associated with a variety of cellular activities BG04_1367 SM00448 cheY-homologous receiver domain BG04_1368 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG04_1371 SM00363 S4 RNA-binding domain BG04_1372 SM00861 Transketolase, pyrimidine binding domain BG04_1378 SM00878 Biotin carboxylase C-terminal domain BG04_1387 SM00382 ATPases associated with a variety of cellular activities BG04_1389 SM00841 Elongation factor P, C-terminal BG04_1389 SM01185 BG04_1389 BG04_139 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BG04_139 SM00534 ATPase domain of DNA mismatch repair MUTS family BG04_1396 SM00529 Helix-turn-helix diphteria tox regulatory element BG04_1400 SM00450 Rhodanese Homology Domain BG04_1404 SM00487 DEAD-like helicases superfamily BG04_1404 SM00490 helicase superfamily c-terminal domain BG04_1418 SM00530 Helix-turn-helix XRE-family like proteins BG04_142 SM00530 Helix-turn-helix XRE-family like proteins BG04_1422 SM00257 Lysin motif BG04_1422 SM00644 BG04_1422 BG04_1434 SM00257 Lysin motif BG04_145 SM00354 helix_turn _helix lactose operon repressor BG04_1457 SM00507 HNH nucleases BG04_148 SM00729 Elongator protein 3, MiaB family, Radical SAM BG04_1481 SM00530 Helix-turn-helix XRE-family like proteins BG04_1482 SM00530 Helix-turn-helix XRE-family like proteins BG04_1485 SM00530 Helix-turn-helix XRE-family like proteins BG04_1487 SM00857 Resolvase, N terminal domain BG04_1490 SM00849 Metallo-beta-lactamase superfamily BG04_1492 SM00631 BG04_1492 BG04_1495 SM00028 Tetratricopeptide repeats BG04_15 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG04_1504 SM00382 ATPases associated with a variety of cellular activities BG04_1523 SM00382 ATPases associated with a variety of cellular activities BG04_1525 SM00518 AP endonuclease family 2 BG04_1526 SM00487 DEAD-like helicases superfamily BG04_1526 SM00490 helicase superfamily c-terminal domain BG04_1534 SM00400 zinc finger BG04_1534 SM00493 BG04_1534 BG04_1537 SM00116 Domain in cystathionine beta-synthase and other proteins. BG04_1544 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG04_1545 SM00322 K homology RNA-binding domain BG04_1549 SM00244 prohibitin homologues BG04_1553 SM00729 Elongator protein 3, MiaB family, Radical SAM BG04_1556 SM00271 DnaJ molecular chaperone homology domain BG04_1560 SM00729 Elongator protein 3, MiaB family, Radical SAM BG04_1561 SM00838 Elongation factor G C-terminus BG04_1567 SM00849 Metallo-beta-lactamase superfamily BG04_1569 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG04_1573 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG04_1575 SM01103 BG04_1575 BG04_1595 SM00382 ATPases associated with a variety of cellular activities BG04_1601 SM00732 Likely ribonuclease with RNase H fold. BG04_1603 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG04_1607 SM00382 ATPases associated with a variety of cellular activities BG04_1608 SM00028 Tetratricopeptide repeats BG04_1612 SM00382 ATPases associated with a variety of cellular activities BG04_1622 SM00287 Bacterial SH3 domain homologues BG04_1622 SM00646 BG04_1622 BG04_1623 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG04_1623 SM00954 Region found in RelA / SpoT proteins BG04_1631 SM01323 BG04_1631 BG04_1635 SM00382 ATPases associated with a variety of cellular activities BG04_1636 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG04_1641 SM00257 Lysin motif BG04_1650 SM01317 BG04_1650 BG04_1654 SM00316 Ribosomal protein S1-like RNA-binding domain BG04_1671 SM00257 Lysin motif BG04_1673 SM01004 Delta-aminolevulinic acid dehydratase BG04_1680 SM00382 ATPases associated with a variety of cellular activities BG04_1680 SM00464 Found in ATP-dependent protease La (LON) BG04_1681 SM00382 ATPases associated with a variety of cellular activities BG04_1682 SM00382 ATPases associated with a variety of cellular activities BG04_1682 SM00994 ClpX C4-type zinc finger BG04_1682 SM01086 C-terminal, D2-small domain, of ClpB protein BG04_1687 SM01329 BG04_1687 BG04_1688 SM00917 LeuA allosteric (dimerisation) domain BG04_1696 SM00909 Sporulation and spore germination BG04_1698 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_1707 SM00062 Bacterial periplasmic substrate-binding proteins BG04_1708 SM00382 ATPases associated with a variety of cellular activities BG04_171 SM00342 helix_turn_helix, arabinose operon control protein BG04_1712 SM00421 helix_turn_helix, Lux Regulon BG04_1719 SM00465 GIY-YIG type nucleases (URI domain) BG04_1721 SM00893 Electron transfer flavoprotein domain BG04_1722 SM00893 Electron transfer flavoprotein domain BG04_1728 SM00463 Small MutS-related domain BG04_1728 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BG04_1728 SM00534 ATPase domain of DNA mismatch repair MUTS family BG04_1729 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG04_1729 SM00481 DNA polymerase alpha chain like domain BG04_1729 SM00483 DNA polymerase X family BG04_173 SM00421 helix_turn_helix, Lux Regulon BG04_173 SM00448 cheY-homologous receiver domain BG04_1733 SM00873 B3/4 domain BG04_1733 SM00874 tRNA synthetase B5 domain BG04_1733 SM00896 Ferredoxin-fold anticodon binding domain BG04_1735 SM00967 RNA 2'-O ribose methyltransferase substrate binding BG04_1744 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG04_1751 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BG04_1754 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BG04_1754 SM01232 BG04_1754 BG04_1755 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BG04_1755 SM00474 3'-5' exonuclease BG04_1755 SM00475 5'-3' exonuclease BG04_1755 SM00482 DNA polymerase A domain BG04_1756 SM00091 PAS domain BG04_1756 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_1756 SM00387 Histidine kinase-like ATPases BG04_1756 SM00388 His Kinase A (phosphoacceptor) domain BG04_1757 SM00448 cheY-homologous receiver domain BG04_1757 SM00862 Transcriptional regulatory protein, C terminal BG04_1760 SM01329 BG04_1760 BG04_1768 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_1769 SM00919 Malic enzyme, NAD binding domain BG04_1769 SM01274 BG04_1769 BG04_1770 SM00481 DNA polymerase alpha chain like domain BG04_1775 SM00116 Domain in cystathionine beta-synthase and other proteins. BG04_1777 SM00849 Metallo-beta-lactamase superfamily BG04_1778 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BG04_1778 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BG04_179 SM01350 BG04_179 BG04_1794 SM00981 BG04_1794 BG04_1799 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG04_180 SM00861 Transketolase, pyrimidine binding domain BG04_1800 SM00363 S4 RNA-binding domain BG04_1800 SM01390 BG04_1800 BG04_1801 SM00363 S4 RNA-binding domain BG04_1804 SM00116 Domain in cystathionine beta-synthase and other proteins. BG04_1808 SM00354 helix_turn _helix lactose operon repressor BG04_1809 SM00830 Chorismate mutase type II BG04_1816 SM00382 ATPases associated with a variety of cellular activities BG04_1816 SM00843 BG04_1816 BG04_1822 SM00849 Metallo-beta-lactamase superfamily BG04_1827 SM00642 Alpha-amylase domain BG04_1832 SM00420 helix_turn_helix, Deoxyribose operon repressor BG04_1833 SM00363 S4 RNA-binding domain BG04_1837 SM00450 Rhodanese Homology Domain BG04_1844 SM00729 Elongator protein 3, MiaB family, Radical SAM BG04_1850 SM00014 Acid phosphatase homologues BG04_1857 SM00382 ATPases associated with a variety of cellular activities BG04_1864 SM00947 Carbonic anhydrase BG04_1865 SM00833 Cobalamin synthesis protein cobW C-terminal domain BG04_187 SM00382 ATPases associated with a variety of cellular activities BG04_1876 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BG04_1888 SM00642 Alpha-amylase domain BG04_189 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_189 SM00387 Histidine kinase-like ATPases BG04_189 SM00388 His Kinase A (phosphoacceptor) domain BG04_190 SM00448 cheY-homologous receiver domain BG04_190 SM00862 Transcriptional regulatory protein, C terminal BG04_1936 SM00316 Ribosomal protein S1-like RNA-binding domain BG04_1938 SM00344 helix_turn_helix ASNC type BG04_194 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG04_194 SM00387 Histidine kinase-like ATPases BG04_194 SM00388 His Kinase A (phosphoacceptor) domain BG04_1943 SM01298 BG04_1943 BG04_1944 SM00479 BG04_1944 BG04_1947 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG04_1974 SM00729 Elongator protein 3, MiaB family, Radical SAM BG04_1985 SM00382 ATPases associated with a variety of cellular activities BG04_1989 SM00382 ATPases associated with a variety of cellular activities BG04_1989 SM00930 BG04_1989 BG04_1991 SM00493 BG04_1991 BG04_200 SM00422 helix_turn_helix, mercury resistance BG04_2002 SM00382 ATPases associated with a variety of cellular activities BG04_2016 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_2016 SM00387 Histidine kinase-like ATPases BG04_2016 SM00388 His Kinase A (phosphoacceptor) domain BG04_2017 SM00448 cheY-homologous receiver domain BG04_2017 SM00862 Transcriptional regulatory protein, C terminal BG04_2019 SM00014 Acid phosphatase homologues BG04_2020 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_2025 SM00852 Probable molybdopterin binding domain BG04_2028 SM00729 Elongator protein 3, MiaB family, Radical SAM BG04_2031 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BG04_2031 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BG04_2036 SM00316 Ribosomal protein S1-like RNA-binding domain BG04_2036 SM00357 Cold shock protein domain BG04_2036 SM00955 BG04_2036 BG04_2039 SM01192 BG04_2039 BG04_2039 SM01193 BG04_2039 BG04_2043 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BG04_205 SM00342 helix_turn_helix, arabinose operon control protein BG04_2056 SM00028 Tetratricopeptide repeats BG04_2074 SM00487 DEAD-like helicases superfamily BG04_2074 SM00490 helicase superfamily c-terminal domain BG04_2075 SM00091 PAS domain BG04_2075 SM00382 ATPases associated with a variety of cellular activities BG04_2079 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG04_2080 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG04_2080 SM00245 tail specific protease BG04_2083 SM00382 ATPases associated with a variety of cellular activities BG04_2089 SM00937 BG04_2089 BG04_2090 SM00957 SecA DEAD-like domain BG04_2090 SM00958 SecA preprotein cross-linking domain BG04_2110 SM00487 DEAD-like helicases superfamily BG04_2110 SM00490 helicase superfamily c-terminal domain BG04_2114 SM00421 helix_turn_helix, Lux Regulon BG04_2114 SM00448 cheY-homologous receiver domain BG04_2115 SM00387 Histidine kinase-like ATPases BG04_2120 SM00244 prohibitin homologues BG04_2122 SM00984 UDP binding domain BG04_2125 SM00487 DEAD-like helicases superfamily BG04_2125 SM00490 helicase superfamily c-terminal domain BG04_2126 SM00257 Lysin motif BG04_2130 SM00530 Helix-turn-helix XRE-family like proteins BG04_214 SM00382 ATPases associated with a variety of cellular activities BG04_2142 SM00382 ATPases associated with a variety of cellular activities BG04_2157 SM00226 Low molecular weight phosphatase family BG04_2163 SM00937 BG04_2163 BG04_2166 SM00357 Cold shock protein domain BG04_2166 SM00382 ATPases associated with a variety of cellular activities BG04_2166 SM00959 Rho termination factor, N-terminal domain BG04_2170 SM00448 cheY-homologous receiver domain BG04_2181 SM00155 Phospholipase D. Active site motifs. BG04_2183 SM00836 DALR anticodon binding domain BG04_2183 SM01016 Arginyl tRNA synthetase N terminal dom BG04_2192 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG04_2202 SM00986 Uracil DNA glycosylase superfamily BG04_2202 SM00987 UreE urease accessory protein, C-terminal domain BG04_2205 SM01350 BG04_2205 BG04_2207 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BG04_2207 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BG04_2222 SM00382 ATPases associated with a variety of cellular activities BG04_2223 SM00382 ATPases associated with a variety of cellular activities BG04_2228 SM00354 helix_turn _helix lactose operon repressor BG04_2234 SM01060 BG04_2234 BG04_2235 SM00387 Histidine kinase-like ATPases BG04_2235 SM00388 His Kinase A (phosphoacceptor) domain BG04_2236 SM00448 cheY-homologous receiver domain BG04_2236 SM00862 Transcriptional regulatory protein, C terminal BG04_2237 SM00642 Alpha-amylase domain BG04_2239 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BG04_2244 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG04_2245 SM00849 Metallo-beta-lactamase superfamily BG04_2248 SM00091 PAS domain BG04_2248 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_2248 SM00387 Histidine kinase-like ATPases BG04_2248 SM00388 His Kinase A (phosphoacceptor) domain BG04_2249 SM00448 cheY-homologous receiver domain BG04_2249 SM00862 Transcriptional regulatory protein, C terminal BG04_2254 SM00788 Adenylosuccinate synthetase BG04_2257 SM00267 diguanylate cyclase BG04_2267 SM00470 ParB-like nuclease domain BG04_2269 SM00470 ParB-like nuclease domain BG04_2271 SM01228 BG04_2271 BG04_2273 SM00393 Putative single-stranded nucleic acids-binding domain BG04_2273 SM01245 BG04_2273 BG04_2277 SM00382 ATPases associated with a variety of cellular activities BG04_2277 SM00760 Bacterial dnaA protein helix-turn-helix domain BG04_2278 SM00480 DNA polymerase III beta subunit BG04_2281 SM00387 Histidine kinase-like ATPases BG04_2281 SM00433 TopoisomeraseII BG04_2282 SM00434 DNA Topoisomerase IV BG04_2289 SM00116 Domain in cystathionine beta-synthase and other proteins. BG04_2289 SM01240 BG04_2289 BG04_2290 SM00936 Penicillin-binding protein 5, C-terminal domain BG04_2297 SM00257 Lysin motif BG04_2297 SM00636 BG04_2297 BG04_2300 SM00382 ATPases associated with a variety of cellular activities BG04_2302 SM00493 BG04_2302 BG04_2332 SM00966 SpoVT / AbrB like domain BG04_2335 SM00493 BG04_2335 BG04_2336 SM00650 Ribosomal RNA adenine dimethylases BG04_2345 SM01400 BG04_2345 BG04_2349 SM00487 DEAD-like helicases superfamily BG04_2349 SM00490 helicase superfamily c-terminal domain BG04_2349 SM00982 BG04_2349 BG04_2349 SM01058 CarD-like/TRCF domain BG04_2350 SM00966 SpoVT / AbrB like domain BG04_2353 SM00363 S4 RNA-binding domain BG04_2357 SM00316 Ribosomal protein S1-like RNA-binding domain BG04_2360 SM00331 Sigma factor PP2C-like phosphatases BG04_2360 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BG04_2362 SM00220 Serine/Threonine protein kinases, catalytic domain BG04_2363 SM00977 TilS substrate C-terminal domain BG04_2365 SM00382 ATPases associated with a variety of cellular activities BG04_2372 SM00905 Dihydroneopterin aldolase BG04_2381 SM00382 ATPases associated with a variety of cellular activities BG04_2381 SM01086 C-terminal, D2-small domain, of ClpB protein BG04_2382 SM00382 ATPases associated with a variety of cellular activities BG04_2384 SM00670 Large family of predicted nucleotide-binding domains BG04_2389 SM00840 BG04_2389 BG04_2390 SM00535 Ribonuclease III family BG04_2391 SM00967 RNA 2'-O ribose methyltransferase substrate binding BG04_2393 SM00421 helix_turn_helix, Lux Regulon BG04_2396 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BG04_2396 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BG04_2397 SM00649 Ribosomal protein L11/L12 BG04_24 SM00919 Malic enzyme, NAD binding domain BG04_24 SM01274 BG04_24 BG04_2403 SM00663 RNA polymerase I subunit A N-terminus BG04_2407 SM00838 Elongation factor G C-terminus BG04_2407 SM00889 Elongation factor G, domain IV BG04_2409 SM01403 BG04_2409 BG04_241 SM00829 Enoylreductase BG04_2413 SM01382 BG04_2413 BG04_2413 SM01383 BG04_2413 BG04_2416 SM00322 K homology RNA-binding domain BG04_242 SM00448 cheY-homologous receiver domain BG04_242 SM00862 Transcriptional regulatory protein, C terminal BG04_2420 SM01374 BG04_2420 BG04_2421 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BG04_243 SM00387 Histidine kinase-like ATPases BG04_2433 SM00316 Ribosomal protein S1-like RNA-binding domain BG04_2436 SM00662 RNA polymerases D BG04_2438 SM00382 ATPases associated with a variety of cellular activities BG04_2439 SM00382 ATPases associated with a variety of cellular activities BG04_244 SM00382 ATPases associated with a variety of cellular activities BG04_2445 SM00646 BG04_2445 BG04_2449 SM01251 BG04_2449 BG04_2473 SM00287 Bacterial SH3 domain homologues BG04_2481 SM00530 Helix-turn-helix XRE-family like proteins BG04_2482 SM00382 ATPases associated with a variety of cellular activities BG04_2487 SM00448 cheY-homologous receiver domain BG04_2487 SM00862 Transcriptional regulatory protein, C terminal BG04_2488 SM00387 Histidine kinase-like ATPases BG04_2488 SM00388 His Kinase A (phosphoacceptor) domain BG04_2491 SM00900 BG04_2491 BG04_2494 SM00487 DEAD-like helicases superfamily BG04_2494 SM00490 helicase superfamily c-terminal domain BG04_2499 SM01005 Alanine racemase, C-terminal domain BG04_2504 SM00387 Histidine kinase-like ATPases BG04_2505 SM00331 Sigma factor PP2C-like phosphatases BG04_2509 SM00331 Sigma factor PP2C-like phosphatases BG04_2510 SM00316 Ribosomal protein S1-like RNA-binding domain BG04_2510 SM00732 Likely ribonuclease with RNase H fold. BG04_2511 SM00731 SprT homologues. BG04_252 SM00450 Rhodanese Homology Domain BG04_252 SM00849 Metallo-beta-lactamase superfamily BG04_253 SM00450 Rhodanese Homology Domain BG04_2532 SM00382 ATPases associated with a variety of cellular activities BG04_2533 SM00881 CoA binding domain BG04_2538 SM00883 Chaperonin 10 Kd subunit BG04_254 SM00450 Rhodanese Homology Domain BG04_2543 SM01130 BG04_2543 BG04_255 SM00450 Rhodanese Homology Domain BG04_2551 SM00460 Transglutaminase/protease-like homologues BG04_2561 SM01001 AIR carboxylase BG04_2563 SM00998 Adenylosuccinate lyase C-terminus BG04_2566 SM01211 BG04_2566 BG04_2571 SM00798 AICARFT/IMPCHase bienzyme BG04_2571 SM00851 MGS-like domain BG04_2572 SM01209 BG04_2572 BG04_2572 SM01210 BG04_2572 BG04_2579 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG04_2579 SM00292 breast cancer carboxy-terminal domain BG04_2579 SM00532 Ligase N family BG04_2584 SM00845 GatB domain BG04_2585 SM00046 Diacylglycerol kinase catalytic domain (presumed) BG04_2593 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_2593 SM00387 Histidine kinase-like ATPases BG04_2593 SM00388 His Kinase A (phosphoacceptor) domain BG04_2597 SM00422 helix_turn_helix, mercury resistance BG04_2601 SM00382 ATPases associated with a variety of cellular activities BG04_2602 SM00062 Bacterial periplasmic substrate-binding proteins BG04_2602 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG04_2609 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_2609 SM00387 Histidine kinase-like ATPases BG04_2609 SM00388 His Kinase A (phosphoacceptor) domain BG04_2610 SM00448 cheY-homologous receiver domain BG04_2610 SM00862 Transcriptional regulatory protein, C terminal BG04_2611 SM00387 Histidine kinase-like ATPases BG04_2611 SM00388 His Kinase A (phosphoacceptor) domain BG04_2612 SM00448 cheY-homologous receiver domain BG04_2612 SM00862 Transcriptional regulatory protein, C terminal BG04_2615 SM00382 ATPases associated with a variety of cellular activities BG04_2616 SM00014 Acid phosphatase homologues BG04_2629 SM00091 PAS domain BG04_2629 SM00387 Histidine kinase-like ATPases BG04_2630 SM00448 cheY-homologous receiver domain BG04_2633 SM00091 PAS domain BG04_2633 SM00387 Histidine kinase-like ATPases BG04_2633 SM00388 His Kinase A (phosphoacceptor) domain BG04_2634 SM00487 DEAD-like helicases superfamily BG04_2634 SM00490 helicase superfamily c-terminal domain BG04_2646 SM01065 Starch binding domain BG04_2650 SM00382 ATPases associated with a variety of cellular activities BG04_2661 SM00226 Low molecular weight phosphatase family BG04_2667 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG04_268 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_268 SM00866 BG04_268 BG04_2682 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG04_2682 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_2682 SM00387 Histidine kinase-like ATPases BG04_2682 SM00388 His Kinase A (phosphoacceptor) domain BG04_2688 SM00822 BG04_2688 BG04_2693 SM00478 endonuclease III BG04_2693 SM00525 BG04_2693 BG04_2699 SM00382 ATPases associated with a variety of cellular activities BG04_2702 SM00382 ATPases associated with a variety of cellular activities BG04_273 SM00894 Excalibur calcium-binding domain BG04_2730 SM00873 B3/4 domain BG04_2731 SM00567 E-Z type HEAT repeats BG04_2735 SM00763 PrkA AAA domain BG04_275 SM00530 Helix-turn-helix XRE-family like proteins BG04_2751 SM00729 Elongator protein 3, MiaB family, Radical SAM BG04_2751 SM00876 Biotin and Thiamin Synthesis associated domain BG04_2753 SM00382 ATPases associated with a variety of cellular activities BG04_2760 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BG04_2769 SM00257 Lysin motif BG04_2772 SM00287 Bacterial SH3 domain homologues BG04_2775 SM00155 Phospholipase D. Active site motifs. BG04_2780 SM00354 helix_turn _helix lactose operon repressor BG04_2787 SM00354 helix_turn _helix lactose operon repressor BG04_2792 SM00344 helix_turn_helix ASNC type BG04_2797 SM00363 S4 RNA-binding domain BG04_2801 SM00864 Tubulin/FtsZ family, GTPase domain BG04_2801 SM00865 Tubulin/FtsZ family, C-terminal domain BG04_2808 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BG04_2812 SM00829 Enoylreductase BG04_2816 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG04_2816 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_282 SM00267 diguanylate cyclase BG04_2832 SM00829 Enoylreductase BG04_2834 SM00382 ATPases associated with a variety of cellular activities BG04_2836 SM00062 Bacterial periplasmic substrate-binding proteins BG04_2836 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG04_2846 SM00855 Phosphoglycerate mutase family BG04_2849 SM00116 Domain in cystathionine beta-synthase and other proteins. BG04_2849 SM01091 Transporter associated domain BG04_2852 SM00382 ATPases associated with a variety of cellular activities BG04_2861 SM00729 Elongator protein 3, MiaB family, Radical SAM BG04_2864 SM00411 bacterial (prokaryotic) histone like domain BG04_2866 SM00382 ATPases associated with a variety of cellular activities BG04_2868 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG04_2882 SM00382 ATPases associated with a variety of cellular activities BG04_2886 SM00014 Acid phosphatase homologues BG04_2896 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_2897 SM00342 helix_turn_helix, arabinose operon control protein BG04_2897 SM00448 cheY-homologous receiver domain BG04_2899 SM00849 Metallo-beta-lactamase superfamily BG04_2927 SM00914 BG04_2927 BG04_2930 SM00822 BG04_2930 BG04_2949 SM00642 Alpha-amylase domain BG04_2950 SM00354 helix_turn _helix lactose operon repressor BG04_2955 SM00382 ATPases associated with a variety of cellular activities BG04_2965 SM00100 Cyclic nucleotide-monophosphate binding domain BG04_2966 SM00859 Semialdehyde dehydrogenase, NAD binding domain BG04_2970 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BG04_2971 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BG04_2975 SM00382 ATPases associated with a variety of cellular activities BG04_2975 SM01086 C-terminal, D2-small domain, of ClpB protein BG04_2977 SM00342 helix_turn_helix, arabinose operon control protein BG04_2987 SM00825 Beta-ketoacyl synthase BG04_2989 SM00382 ATPases associated with a variety of cellular activities BG04_2990 SM00382 ATPases associated with a variety of cellular activities BG04_2999 SM00382 ATPases associated with a variety of cellular activities BG04_3000 SM00382 ATPases associated with a variety of cellular activities BG04_3010 SM00155 Phospholipase D. Active site motifs. BG04_3017 SM01118 BG04_3017 BG04_3019 SM00954 Region found in RelA / SpoT proteins BG04_3023 SM00116 Domain in cystathionine beta-synthase and other proteins. BG04_3023 SM00924 MgtE intracellular N domain BG04_3045 SM01350 BG04_3045 BG04_3051 SM00344 helix_turn_helix ASNC type BG04_3055 SM00487 DEAD-like helicases superfamily BG04_3055 SM00490 helicase superfamily c-terminal domain BG04_3059 SM00849 Metallo-beta-lactamase superfamily BG04_3066 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG04_3066 SM00387 Histidine kinase-like ATPases BG04_3067 SM00448 cheY-homologous receiver domain BG04_3067 SM00850 LytTr DNA-binding domain BG04_3072 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BG04_3090 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BG04_3096 SM00448 cheY-homologous receiver domain BG04_3097 SM00387 Histidine kinase-like ATPases BG04_3110 SM00382 ATPases associated with a variety of cellular activities BG04_3114 SM00382 ATPases associated with a variety of cellular activities BG04_3129 SM00091 PAS domain BG04_3129 SM00387 Histidine kinase-like ATPases BG04_3130 SM00448 cheY-homologous receiver domain BG04_3137 SM00530 Helix-turn-helix XRE-family like proteins BG04_314 SM00357 Cold shock protein domain BG04_3142 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_3148 SM00091 PAS domain BG04_3148 SM00387 Histidine kinase-like ATPases BG04_3149 SM00448 cheY-homologous receiver domain BG04_3155 SM00116 Domain in cystathionine beta-synthase and other proteins. BG04_3155 SM00382 ATPases associated with a variety of cellular activities BG04_316 SM00357 Cold shock protein domain BG04_3172 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BG04_3172 SM01232 BG04_3172 BG04_3181 SM00382 ATPases associated with a variety of cellular activities BG04_3186 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BG04_319 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_3192 SM00899 BG04_3192 BG04_3197 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG04_3198 SM00829 Enoylreductase BG04_3199 SM00382 ATPases associated with a variety of cellular activities BG04_3200 SM00382 ATPases associated with a variety of cellular activities BG04_3205 SM00346 helix_turn_helix isocitrate lyase regulation BG04_3208 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_3213 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_3214 SM00354 helix_turn _helix lactose operon repressor BG04_3217 SM00382 ATPases associated with a variety of cellular activities BG04_3221 SM00903 Flavin reductase like domain BG04_3227 SM00267 diguanylate cyclase BG04_3227 SM00448 cheY-homologous receiver domain BG04_323 SM00530 Helix-turn-helix XRE-family like proteins BG04_3231 SM00448 cheY-homologous receiver domain BG04_3232 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG04_3232 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_3232 SM00387 Histidine kinase-like ATPases BG04_3232 SM00388 His Kinase A (phosphoacceptor) domain BG04_3232 SM00448 cheY-homologous receiver domain BG04_3235 SM00855 Phosphoglycerate mutase family BG04_3242 SM00354 helix_turn _helix lactose operon repressor BG04_3249 SM00642 Alpha-amylase domain BG04_3250 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_3250 SM00866 BG04_3250 BG04_3251 SM00796 Allophanate hydrolase subunit 1 BG04_3252 SM00797 Allophanate hydrolase subunit 2 BG04_3261 SM00829 Enoylreductase BG04_3270 SM00796 Allophanate hydrolase subunit 1 BG04_3270 SM00797 Allophanate hydrolase subunit 2 BG04_3270 SM00878 Biotin carboxylase C-terminal domain BG04_3275 SM00357 Cold shock protein domain BG04_3283 SM00267 diguanylate cyclase BG04_3291 SM00854 Bacterial capsule synthesis protein PGA_cap BG04_3334 SM00052 Putative diguanylate phosphodiesterase BG04_3335 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG04_3335 SM00091 PAS domain BG04_3335 SM00267 diguanylate cyclase BG04_3343 SM00387 Histidine kinase-like ATPases BG04_3344 SM00448 cheY-homologous receiver domain BG04_3348 SM00646 BG04_3348 BG04_3352 SM00914 BG04_3352 BG04_3354 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BG04_3357 SM00382 ATPases associated with a variety of cellular activities BG04_3364 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG04_3369 SM00052 Putative diguanylate phosphodiesterase BG04_3369 SM00267 diguanylate cyclase BG04_3369 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_3373 SM00052 Putative diguanylate phosphodiesterase BG04_3373 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG04_3373 SM00091 PAS domain BG04_3373 SM00267 diguanylate cyclase BG04_3393 SM00530 Helix-turn-helix XRE-family like proteins BG04_3410 SM00984 UDP binding domain BG04_3412 SM00382 ATPases associated with a variety of cellular activities BG04_342 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_342 SM00387 Histidine kinase-like ATPases BG04_342 SM00388 His Kinase A (phosphoacceptor) domain BG04_343 SM00448 cheY-homologous receiver domain BG04_343 SM00862 Transcriptional regulatory protein, C terminal BG04_3430 SM00984 UDP binding domain BG04_3448 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_3448 SM00895 BG04_3448 BG04_346 SM00382 ATPases associated with a variety of cellular activities BG04_3463 SM00465 GIY-YIG type nucleases (URI domain) BG04_3465 SM00835 Cupin BG04_3475 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_3475 SM00866 BG04_3475 BG04_3486 SM00382 ATPases associated with a variety of cellular activities BG04_3487 SM01091 Transporter associated domain BG04_3488 SM00422 helix_turn_helix, mercury resistance BG04_35 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_3510 SM00387 Histidine kinase-like ATPases BG04_3511 SM00448 cheY-homologous receiver domain BG04_3511 SM00850 LytTr DNA-binding domain BG04_3512 SM00382 ATPases associated with a variety of cellular activities BG04_3516 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_3521 SM00098 Alkaline phosphatase homologues BG04_3522 SM00448 cheY-homologous receiver domain BG04_3522 SM00850 LytTr DNA-binding domain BG04_3523 SM00091 PAS domain BG04_3523 SM00387 Histidine kinase-like ATPases BG04_3523 SM00388 His Kinase A (phosphoacceptor) domain BG04_3523 SM00448 cheY-homologous receiver domain BG04_353 SM00530 Helix-turn-helix XRE-family like proteins BG04_3530 SM00822 BG04_3530 BG04_3535 SM00729 Elongator protein 3, MiaB family, Radical SAM BG04_3536 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_3536 SM00895 BG04_3536 BG04_3542 SM00091 PAS domain BG04_3542 SM00387 Histidine kinase-like ATPases BG04_3542 SM00388 His Kinase A (phosphoacceptor) domain BG04_3551 SM01007 Class II Aldolase and Adducin N-terminal domain BG04_3554 SM00382 ATPases associated with a variety of cellular activities BG04_3560 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_3562 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG04_3562 SM00091 PAS domain BG04_3562 SM00387 Histidine kinase-like ATPases BG04_3562 SM00388 His Kinase A (phosphoacceptor) domain BG04_3564 SM00382 ATPases associated with a variety of cellular activities BG04_3564 SM01086 C-terminal, D2-small domain, of ClpB protein BG04_3568 SM00822 BG04_3568 BG04_3580 SM00257 Lysin motif BG04_3588 SM01018 B12 binding domain BG04_359 SM00829 Enoylreductase BG04_3595 SM01061 CAT RNA binding domain BG04_36 SM00422 helix_turn_helix, mercury resistance BG04_360 SM00422 helix_turn_helix, mercury resistance BG04_3607 SM00914 BG04_3607 BG04_3610 SM00260 Two component signalling adaptor domain BG04_3610 SM00448 cheY-homologous receiver domain BG04_3612 SM00257 Lysin motif BG04_3618 SM00052 Putative diguanylate phosphodiesterase BG04_3630 SM01350 BG04_3630 BG04_3631 SM00382 ATPases associated with a variety of cellular activities BG04_3632 SM00382 ATPases associated with a variety of cellular activities BG04_3634 SM00849 Metallo-beta-lactamase superfamily BG04_3641 SM00861 Transketolase, pyrimidine binding domain BG04_3653 SM00838 Elongation factor G C-terminus BG04_3659 SM00670 Large family of predicted nucleotide-binding domains BG04_3663 SM00878 Biotin carboxylase C-terminal domain BG04_3672 SM00116 Domain in cystathionine beta-synthase and other proteins. BG04_3679 SM00851 MGS-like domain BG04_368 SM00357 Cold shock protein domain BG04_3687 SM00479 BG04_3687 BG04_3687 SM00487 DEAD-like helicases superfamily BG04_3687 SM00491 BG04_3687 BG04_3694 SM00478 endonuclease III BG04_3694 SM00525 BG04_3694 BG04_370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG04_3717 SM00357 Cold shock protein domain BG04_3720 SM00267 diguanylate cyclase BG04_3722 SM00487 DEAD-like helicases superfamily BG04_3722 SM00490 helicase superfamily c-terminal domain BG04_3730 SM00387 Histidine kinase-like ATPases BG04_3731 SM00421 helix_turn_helix, Lux Regulon BG04_3731 SM00448 cheY-homologous receiver domain BG04_3732 SM00642 Alpha-amylase domain BG04_3733 SM00981 BG04_3733 BG04_3738 SM00382 ATPases associated with a variety of cellular activities BG04_3740 SM00491 BG04_3740 BG04_3760 SM00357 Cold shock protein domain BG04_3763 SM00028 Tetratricopeptide repeats BG04_3768 SM00382 ATPases associated with a variety of cellular activities BG04_3772 SM00382 ATPases associated with a variety of cellular activities BG04_3776 SM00052 Putative diguanylate phosphodiesterase BG04_3776 SM00091 PAS domain BG04_3776 SM00267 diguanylate cyclase BG04_3782 SM00421 helix_turn_helix, Lux Regulon BG04_3782 SM00448 cheY-homologous receiver domain BG04_3783 SM00387 Histidine kinase-like ATPases BG04_3787 SM00155 Phospholipase D. Active site motifs. BG04_3790 SM00257 Lysin motif BG04_3790 SM00636 BG04_3790 BG04_3801 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_3801 SM00866 BG04_3801 BG04_3806 SM00098 Alkaline phosphatase homologues BG04_3810 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_3813 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_382 SM00631 BG04_382 BG04_3820 SM00382 ATPases associated with a variety of cellular activities BG04_3830 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BG04_3834 SM00382 ATPases associated with a variety of cellular activities BG04_3837 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG04_3837 SM00387 Histidine kinase-like ATPases BG04_3837 SM00388 His Kinase A (phosphoacceptor) domain BG04_3837 SM00448 cheY-homologous receiver domain BG04_3838 SM00138 Methyltransferase, chemotaxis proteins BG04_3839 SM00331 Sigma factor PP2C-like phosphatases BG04_3839 SM00448 cheY-homologous receiver domain BG04_3842 SM00100 Cyclic nucleotide-monophosphate binding domain BG04_3846 SM00640 Glycosyl hydrolases family 32 BG04_3856 SM00849 Metallo-beta-lactamase superfamily BG04_3862 SM00849 Metallo-beta-lactamase superfamily BG04_3872 SM00354 helix_turn _helix lactose operon repressor BG04_3874 SM00640 Glycosyl hydrolases family 32 BG04_3877 SM00382 ATPases associated with a variety of cellular activities BG04_3882 SM00640 Glycosyl hydrolases family 32 BG04_3893 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_3896 SM01329 BG04_3896 BG04_390 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_390 SM00895 BG04_390 BG04_3901 SM00507 HNH nucleases BG04_3912 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_3914 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG04_396 SM00420 helix_turn_helix, Deoxyribose operon repressor BG04_396 SM01134 BG04_396 BG04_3963 SM00342 helix_turn_helix, arabinose operon control protein BG04_3963 SM00871 Bacterial transcription activator, effector binding domain BG04_3969 SM00091 PAS domain BG04_3969 SM00116 Domain in cystathionine beta-synthase and other proteins. BG04_3969 SM00382 ATPases associated with a variety of cellular activities BG04_3972 SM00354 helix_turn _helix lactose operon repressor BG04_3987 SM00091 PAS domain BG04_3989 SM00344 helix_turn_helix ASNC type BG04_4003 SM00357 Cold shock protein domain BG04_4014 SM01130 BG04_4014 BG04_4016 SM00116 Domain in cystathionine beta-synthase and other proteins. BG04_4017 SM00354 helix_turn _helix lactose operon repressor BG04_4022 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BG04_4027 SM00382 ATPases associated with a variety of cellular activities BG04_4028 SM00382 ATPases associated with a variety of cellular activities BG04_403 SM00460 Transglutaminase/protease-like homologues BG04_4033 SM00387 Histidine kinase-like ATPases BG04_4035 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_4037 SM00346 helix_turn_helix isocitrate lyase regulation BG04_4041 SM01130 BG04_4041 BG04_4044 SM00257 Lysin motif BG04_4044 SM00636 BG04_4044 BG04_4049 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_4055 SM00849 Metallo-beta-lactamase superfamily BG04_4060 SM00710 Parallel beta-helix repeats BG04_4061 SM00382 ATPases associated with a variety of cellular activities BG04_4062 SM00226 Low molecular weight phosphatase family BG04_4064 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG04_4066 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG04_4079 SM00411 bacterial (prokaryotic) histone like domain BG04_408 SM00530 Helix-turn-helix XRE-family like proteins BG04_4088 SM00357 Cold shock protein domain BG04_4090 SM00487 DEAD-like helicases superfamily BG04_4090 SM00490 helicase superfamily c-terminal domain BG04_4092 SM00357 Cold shock protein domain BG04_4094 SM00411 bacterial (prokaryotic) histone like domain BG04_4095 SM00411 bacterial (prokaryotic) histone like domain BG04_4105 SM00357 Cold shock protein domain BG04_4127 SM00914 BG04_4127 BG04_4128 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_4133 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_4157 SM00422 helix_turn_helix, mercury resistance BG04_4157 SM00871 Bacterial transcription activator, effector binding domain BG04_416 SM01007 Class II Aldolase and Adducin N-terminal domain BG04_418 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_4188 SM00116 Domain in cystathionine beta-synthase and other proteins. BG04_419 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG04_4196 SM00091 PAS domain BG04_4196 SM00382 ATPases associated with a variety of cellular activities BG04_4213 SM00861 Transketolase, pyrimidine binding domain BG04_4216 SM00382 ATPases associated with a variety of cellular activities BG04_4217 SM00829 Enoylreductase BG04_4219 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_423 SM00899 BG04_423 BG04_4230 SM00914 BG04_4230 BG04_4232 SM00636 BG04_4232 BG04_4233 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_4233 SM00387 Histidine kinase-like ATPases BG04_4233 SM00388 His Kinase A (phosphoacceptor) domain BG04_4234 SM00448 cheY-homologous receiver domain BG04_4234 SM00862 Transcriptional regulatory protein, C terminal BG04_4248 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG04_4250 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BG04_4250 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BG04_4250 SM00493 BG04_4250 BG04_4257 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_4257 SM00895 BG04_4257 BG04_4258 SM01329 BG04_4258 BG04_4263 SM00028 Tetratricopeptide repeats BG04_4263 SM00530 Helix-turn-helix XRE-family like proteins BG04_4271 SM00450 Rhodanese Homology Domain BG04_4286 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG04_4287 SM00382 ATPases associated with a variety of cellular activities BG04_4288 SM00567 E-Z type HEAT repeats BG04_4288 SM00932 Scaffold protein Nfu/NifU N terminal BG04_429 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_4300 SM00855 Phosphoglycerate mutase family BG04_4304 SM00422 helix_turn_helix, mercury resistance BG04_4306 SM00833 Cobalamin synthesis protein cobW C-terminal domain BG04_4308 SM00465 GIY-YIG type nucleases (URI domain) BG04_4310 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BG04_4310 SM00475 5'-3' exonuclease BG04_4319 SM00966 SpoVT / AbrB like domain BG04_4335 SM00387 Histidine kinase-like ATPases BG04_4335 SM00388 His Kinase A (phosphoacceptor) domain BG04_4338 SM00642 Alpha-amylase domain BG04_4351 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_4356 SM00448 cheY-homologous receiver domain BG04_4356 SM00862 Transcriptional regulatory protein, C terminal BG04_4357 SM00387 Histidine kinase-like ATPases BG04_4357 SM00388 His Kinase A (phosphoacceptor) domain BG04_4361 SM00919 Malic enzyme, NAD binding domain BG04_4361 SM01274 BG04_4361 BG04_4368 SM00062 Bacterial periplasmic substrate-binding proteins BG04_4371 SM00382 ATPases associated with a variety of cellular activities BG04_4372 SM00904 Riboflavin kinase BG04_4375 SM00646 BG04_4375 BG04_4378 SM00644 BG04_4378 BG04_4384 SM00919 Malic enzyme, NAD binding domain BG04_4384 SM01274 BG04_4384 BG04_4394 SM00422 helix_turn_helix, mercury resistance BG04_4410 SM00155 Phospholipase D. Active site motifs. BG04_4412 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_4422 SM00448 cheY-homologous receiver domain BG04_4422 SM00862 Transcriptional regulatory protein, C terminal BG04_4423 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_4423 SM00387 Histidine kinase-like ATPases BG04_4423 SM00388 His Kinase A (phosphoacceptor) domain BG04_4429 SM00382 ATPases associated with a variety of cellular activities BG04_4431 SM00448 cheY-homologous receiver domain BG04_4431 SM00862 Transcriptional regulatory protein, C terminal BG04_4432 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_4432 SM00387 Histidine kinase-like ATPases BG04_4432 SM00388 His Kinase A (phosphoacceptor) domain BG04_4433 SM00382 ATPases associated with a variety of cellular activities BG04_4439 SM00420 helix_turn_helix, Deoxyribose operon repressor BG04_4439 SM01134 BG04_4439 BG04_4446 SM00422 helix_turn_helix, mercury resistance BG04_4448 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG04_4455 SM00257 Lysin motif BG04_4456 SM00354 helix_turn _helix lactose operon repressor BG04_4472 SM00530 Helix-turn-helix XRE-family like proteins BG04_4476 SM00382 ATPases associated with a variety of cellular activities BG04_4477 SM00327 von Willebrand factor (vWF) type A domain BG04_4479 SM01038 Beta galactosidase small chain BG04_4480 SM00342 helix_turn_helix, arabinose operon control protein BG04_4483 SM00382 ATPases associated with a variety of cellular activities BG04_4497 SM00448 cheY-homologous receiver domain BG04_4497 SM00862 Transcriptional regulatory protein, C terminal BG04_4498 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_4499 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_4499 SM00387 Histidine kinase-like ATPases BG04_4499 SM00388 His Kinase A (phosphoacceptor) domain BG04_4510 SM00530 Helix-turn-helix XRE-family like proteins BG04_4518 SM00316 Ribosomal protein S1-like RNA-binding domain BG04_4528 SM00530 Helix-turn-helix XRE-family like proteins BG04_4571 SM00257 Lysin motif BG04_4571 SM00644 BG04_4571 BG04_4571 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BG04_4572 SM00255 Toll - interleukin 1 - resistance BG04_4582 SM00342 helix_turn_helix, arabinose operon control protein BG04_4584 SM00382 ATPases associated with a variety of cellular activities BG04_4589 SM00382 ATPases associated with a variety of cellular activities BG04_4593 SM00354 helix_turn _helix lactose operon repressor BG04_4599 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BG04_4599 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BG04_4599 SM00493 BG04_4599 BG04_4605 SM00155 Phospholipase D. Active site motifs. BG04_462 SM00859 Semialdehyde dehydrogenase, NAD binding domain BG04_4628 SM00341 Helicase and RNase D C-terminal BG04_4628 SM00487 DEAD-like helicases superfamily BG04_4628 SM00490 helicase superfamily c-terminal domain BG04_4628 SM00956 BG04_4628 BG04_4629 SM00091 PAS domain BG04_4629 SM00382 ATPases associated with a variety of cellular activities BG04_4633 SM00490 helicase superfamily c-terminal domain BG04_4635 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG04_4640 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_4641 SM00382 ATPases associated with a variety of cellular activities BG04_4647 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_4650 SM00849 Metallo-beta-lactamase superfamily BG04_4653 SM00257 Lysin motif BG04_4654 SM00382 ATPases associated with a variety of cellular activities BG04_4656 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG04_4656 SM00138 Methyltransferase, chemotaxis proteins BG04_4656 SM00387 Histidine kinase-like ATPases BG04_4656 SM00388 His Kinase A (phosphoacceptor) domain BG04_4676 SM00028 Tetratricopeptide repeats BG04_4680 SM01266 BG04_4680 BG04_4687 SM00479 BG04_4687 BG04_4692 SM00641 Glycosyl hydrolases family 25 BG04_4694 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG04_4694 SM00091 PAS domain BG04_4694 SM00387 Histidine kinase-like ATPases BG04_4694 SM00388 His Kinase A (phosphoacceptor) domain BG04_4704 SM00387 Histidine kinase-like ATPases BG04_4705 SM00448 cheY-homologous receiver domain BG04_471 SM00100 Cyclic nucleotide-monophosphate binding domain BG04_4724 SM00091 PAS domain BG04_4724 SM00387 Histidine kinase-like ATPases BG04_4724 SM00388 His Kinase A (phosphoacceptor) domain BG04_4727 SM00822 BG04_4727 BG04_4738 SM00829 Enoylreductase BG04_474 SM00422 helix_turn_helix, mercury resistance BG04_4742 SM00882 Coenzyme A transferase BG04_4743 SM00882 Coenzyme A transferase BG04_4753 SM00849 Metallo-beta-lactamase superfamily BG04_4758 SM00342 helix_turn_helix, arabinose operon control protein BG04_4760 SM01209 BG04_4760 BG04_477 SM00829 Enoylreductase BG04_4773 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_4776 SM00382 ATPases associated with a variety of cellular activities BG04_478 SM00028 Tetratricopeptide repeats BG04_478 SM00382 ATPases associated with a variety of cellular activities BG04_4782 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_4782 SM00866 BG04_4782 BG04_4785 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG04_4786 SM00849 Metallo-beta-lactamase superfamily BG04_4788 SM00450 Rhodanese Homology Domain BG04_4799 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG04_4800 SM00641 Glycosyl hydrolases family 25 BG04_4803 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_4808 SM00849 Metallo-beta-lactamase superfamily BG04_4810 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BG04_4814 SM00382 ATPases associated with a variety of cellular activities BG04_4834 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_4842 SM00479 BG04_4842 BG04_4857 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG04_4857 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_4865 SM00346 helix_turn_helix isocitrate lyase regulation BG04_4866 SM00878 Biotin carboxylase C-terminal domain BG04_4868 SM00797 Allophanate hydrolase subunit 2 BG04_4869 SM00796 Allophanate hydrolase subunit 1 BG04_4873 SM00642 Alpha-amylase domain BG04_4891 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG04_4896 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BG04_4904 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG04_4913 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_4917 SM00422 helix_turn_helix, mercury resistance BG04_4918 SM00357 Cold shock protein domain BG04_4920 SM00487 DEAD-like helicases superfamily BG04_4920 SM00490 helicase superfamily c-terminal domain BG04_493 SM00530 Helix-turn-helix XRE-family like proteins BG04_4946 SM00487 DEAD-like helicases superfamily BG04_4946 SM00490 helicase superfamily c-terminal domain BG04_4949 SM00421 helix_turn_helix, Lux Regulon BG04_4949 SM00448 cheY-homologous receiver domain BG04_495 SM00091 PAS domain BG04_495 SM00387 Histidine kinase-like ATPases BG04_495 SM00388 His Kinase A (phosphoacceptor) domain BG04_4950 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG04_4953 SM00530 Helix-turn-helix XRE-family like proteins BG04_4955 SM00773 Proposed nucleic acid binding domain BG04_4959 SM01131 BG04_4959 BG04_4966 SM00563 Phosphate acyltransferases BG04_4976 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_499 SM00382 ATPases associated with a variety of cellular activities BG04_4996 SM00434 DNA Topoisomerase IV BG04_4997 SM00387 Histidine kinase-like ATPases BG04_4997 SM00433 TopoisomeraseII BG04_4998 SM00881 CoA binding domain BG04_4999 SM01207 BG04_4999 BG04_5012 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BG04_5021 SM01092 CO dehydrogenase flavoprotein C-terminal domain BG04_5022 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BG04_5035 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_5051 SM00422 helix_turn_helix, mercury resistance BG04_5053 SM00947 Carbonic anhydrase BG04_5055 SM00448 cheY-homologous receiver domain BG04_5055 SM00862 Transcriptional regulatory protein, C terminal BG04_5056 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_5056 SM00387 Histidine kinase-like ATPases BG04_5056 SM00388 His Kinase A (phosphoacceptor) domain BG04_5058 SM00860 SMI1 / KNR4 family BG04_5083 SM00914 BG04_5083 BG04_5089 SM00919 Malic enzyme, NAD binding domain BG04_5089 SM01274 BG04_5089 BG04_5106 SM00914 BG04_5106 BG04_5111 SM00382 ATPases associated with a variety of cellular activities BG04_5113 SM00421 helix_turn_helix, Lux Regulon BG04_5113 SM00448 cheY-homologous receiver domain BG04_5127 SM00382 ATPases associated with a variety of cellular activities BG04_5131 SM00248 ankyrin repeats BG04_5134 SM00248 ankyrin repeats BG04_5135 SM00028 Tetratricopeptide repeats BG04_5139 SM00248 ankyrin repeats BG04_5142 SM00248 ankyrin repeats BG04_5146 SM00860 SMI1 / KNR4 family BG04_5155 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_5161 SM00420 helix_turn_helix, Deoxyribose operon repressor BG04_5161 SM01134 BG04_5161 BG04_5171 SM00382 ATPases associated with a variety of cellular activities BG04_5174 SM00357 Cold shock protein domain BG04_5175 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_5177 SM00357 Cold shock protein domain BG04_5185 SM00829 Enoylreductase BG04_5187 SM00850 LytTr DNA-binding domain BG04_5190 SM00257 Lysin motif BG04_5193 SM00835 Cupin BG04_5200 SM00860 SMI1 / KNR4 family BG04_5205 SM00860 SMI1 / KNR4 family BG04_5211 SM00860 SMI1 / KNR4 family BG04_522 SM00882 Coenzyme A transferase BG04_5225 SM00860 SMI1 / KNR4 family BG04_5227 SM00860 SMI1 / KNR4 family BG04_5228 SM00860 SMI1 / KNR4 family BG04_5239 SM00382 ATPases associated with a variety of cellular activities BG04_5244 SM00354 helix_turn _helix lactose operon repressor BG04_5254 SM00849 Metallo-beta-lactamase superfamily BG04_5272 SM00357 Cold shock protein domain BG04_5275 SM00829 Enoylreductase BG04_5296 SM00411 bacterial (prokaryotic) histone like domain BG04_530 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG04_5300 SM00914 BG04_5300 BG04_5301 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_5301 SM00387 Histidine kinase-like ATPases BG04_5301 SM00388 His Kinase A (phosphoacceptor) domain BG04_5302 SM00448 cheY-homologous receiver domain BG04_5302 SM00862 Transcriptional regulatory protein, C terminal BG04_5310 SM00062 Bacterial periplasmic substrate-binding proteins BG04_5319 SM01133 BG04_5319 BG04_532 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_5320 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BG04_5323 SM00507 HNH nucleases BG04_5325 SM00641 Glycosyl hydrolases family 25 BG04_5328 SM01207 BG04_5328 BG04_5332 SM00849 Metallo-beta-lactamase superfamily BG04_5342 SM00854 Bacterial capsule synthesis protein PGA_cap BG04_5344 SM00052 Putative diguanylate phosphodiesterase BG04_5359 SM00895 BG04_5359 BG04_5367 SM01091 Transporter associated domain BG04_5370 SM00382 ATPases associated with a variety of cellular activities BG04_5371 SM00382 ATPases associated with a variety of cellular activities BG04_5380 SM00318 Staphylococcal nuclease homologues BG04_5381 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BG04_5396 SM00346 helix_turn_helix isocitrate lyase regulation BG04_5408 SM00382 ATPases associated with a variety of cellular activities BG04_5427 SM00387 Histidine kinase-like ATPases BG04_5427 SM00388 His Kinase A (phosphoacceptor) domain BG04_5428 SM00448 cheY-homologous receiver domain BG04_5428 SM00862 Transcriptional regulatory protein, C terminal BG04_5433 SM00861 Transketolase, pyrimidine binding domain BG04_5441 SM00871 Bacterial transcription activator, effector binding domain BG04_5446 SM00938 Nitrogen regulatory protein P-II BG04_5456 SM01324 BG04_5456 BG04_5463 SM00382 ATPases associated with a variety of cellular activities BG04_547 SM00354 helix_turn _helix lactose operon repressor BG04_5472 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BG04_5473 SM00354 helix_turn _helix lactose operon repressor BG04_548 SM00448 cheY-homologous receiver domain BG04_548 SM00850 LytTr DNA-binding domain BG04_5483 SM00563 Phosphate acyltransferases BG04_549 SM00387 Histidine kinase-like ATPases BG04_549 SM00388 His Kinase A (phosphoacceptor) domain BG04_549 SM00448 cheY-homologous receiver domain BG04_5491 SM00988 UreE urease accessory protein, N-terminal domain BG04_5496 SM00257 Lysin motif BG04_5497 SM00257 Lysin motif BG04_5506 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_5510 SM00382 ATPases associated with a variety of cellular activities BG04_5521 SM01091 Transporter associated domain BG04_5524 SM00116 Domain in cystathionine beta-synthase and other proteins. BG04_5531 SM00830 Chorismate mutase type II BG04_5541 SM01060 BG04_5541 BG04_5558 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG04_5564 SM00287 Bacterial SH3 domain homologues BG04_5564 SM00646 BG04_5564 BG04_5566 SM00966 SpoVT / AbrB like domain BG04_5569 SM00240 Forkhead associated domain BG04_5569 SM00862 Transcriptional regulatory protein, C terminal BG04_5577 SM00046 Diacylglycerol kinase catalytic domain (presumed) BG04_5582 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_5585 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG04_5585 SM00091 PAS domain BG04_5588 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BG04_5592 SM00155 Phospholipase D. Active site motifs. BG04_5594 SM00857 Resolvase, N terminal domain BG04_560 SM00116 Domain in cystathionine beta-synthase and other proteins. BG04_5615 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_5619 SM00857 Resolvase, N terminal domain BG04_5629 SM00411 bacterial (prokaryotic) histone like domain BG04_5640 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG04_5668 SM00411 bacterial (prokaryotic) histone like domain BG04_5676 SM00860 SMI1 / KNR4 family BG04_5680 SM00382 ATPases associated with a variety of cellular activities BG04_5681 SM01260 BG04_5681 BG04_5686 SM00530 Helix-turn-helix XRE-family like proteins BG04_5689 SM00850 LytTr DNA-binding domain BG04_5690 SM00382 ATPases associated with a variety of cellular activities BG04_5692 SM00342 helix_turn_helix, arabinose operon control protein BG04_5698 SM00563 Phosphate acyltransferases BG04_5705 SM00479 BG04_5705 BG04_5716 SM00530 Helix-turn-helix XRE-family like proteins BG04_5717 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains BG04_5723 SM00387 Histidine kinase-like ATPases BG04_5724 SM00448 cheY-homologous receiver domain BG04_5725 SM00530 Helix-turn-helix XRE-family like proteins BG04_5735 SM00507 HNH nucleases BG04_5764 SM00411 bacterial (prokaryotic) histone like domain BG04_5780 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_5784 SM00857 Resolvase, N terminal domain BG04_5802 SM01130 BG04_5802 BG04_5806 SM00091 PAS domain BG04_5806 SM00382 ATPases associated with a variety of cellular activities BG04_5818 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_582 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BG04_5821 SM00966 SpoVT / AbrB like domain BG04_585 SM00346 helix_turn_helix isocitrate lyase regulation BG04_5857 SM00849 Metallo-beta-lactamase superfamily BG04_5860 SM00966 SpoVT / AbrB like domain BG04_588 SM00382 ATPases associated with a variety of cellular activities BG04_5886 SM00530 Helix-turn-helix XRE-family like proteins BG04_5891 SM00829 Enoylreductase BG04_5894 SM00411 bacterial (prokaryotic) histone like domain BG04_5901 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_5902 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_5905 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG04_5905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_5906 SM01060 BG04_5906 BG04_5916 SM00354 helix_turn _helix lactose operon repressor BG04_5917 SM01130 BG04_5917 BG04_5921 SM00342 helix_turn_helix, arabinose operon control protein BG04_5930 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BG04_5932 SM00822 BG04_5932 BG04_5944 SM00382 ATPases associated with a variety of cellular activities BG04_5948 SM00382 ATPases associated with a variety of cellular activities BG04_5952 SM00382 ATPases associated with a variety of cellular activities BG04_597 SM00530 Helix-turn-helix XRE-family like proteins BG04_5970 SM00530 Helix-turn-helix XRE-family like proteins BG04_5972 SM00829 Enoylreductase BG04_5980 SM00387 Histidine kinase-like ATPases BG04_5980 SM00388 His Kinase A (phosphoacceptor) domain BG04_5983 SM00382 ATPases associated with a variety of cellular activities BG04_5997 SM00382 ATPases associated with a variety of cellular activities BG04_613 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_613 SM00866 BG04_613 BG04_615 SM00382 ATPases associated with a variety of cellular activities BG04_617 SM00062 Bacterial periplasmic substrate-binding proteins BG04_617 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG04_652 SM00870 BG04_652 BG04_663 SM00919 Malic enzyme, NAD binding domain BG04_663 SM01274 BG04_663 BG04_681 SM00640 Glycosyl hydrolases family 32 BG04_682 SM00642 Alpha-amylase domain BG04_683 SM00354 helix_turn _helix lactose operon repressor BG04_690 SM00422 helix_turn_helix, mercury resistance BG04_701 SM00342 helix_turn_helix, arabinose operon control protein BG04_701 SM00871 Bacterial transcription activator, effector binding domain BG04_704 SM00530 Helix-turn-helix XRE-family like proteins BG04_71 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG04_710 SM00852 Probable molybdopterin binding domain BG04_712 SM00852 Probable molybdopterin binding domain BG04_730 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_734 SM00357 Cold shock protein domain BG04_735 SM00855 Phosphoglycerate mutase family BG04_748 SM00052 Putative diguanylate phosphodiesterase BG04_748 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG04_748 SM00267 diguanylate cyclase BG04_754 SM00966 SpoVT / AbrB like domain BG04_76 SM00257 Lysin motif BG04_76 SM00646 BG04_76 BG04_767 SM00422 helix_turn_helix, mercury resistance BG04_770 SM00422 helix_turn_helix, mercury resistance BG04_775 SM00640 Glycosyl hydrolases family 32 BG04_783 SM00382 ATPases associated with a variety of cellular activities BG04_785 SM00387 Histidine kinase-like ATPases BG04_785 SM00388 His Kinase A (phosphoacceptor) domain BG04_786 SM00448 cheY-homologous receiver domain BG04_786 SM00862 Transcriptional regulatory protein, C terminal BG04_801 SM00984 UDP binding domain BG04_807 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG04_808 SM00347 helix_turn_helix multiple antibiotic resistance protein BG04_822 SM00344 helix_turn_helix ASNC type BG04_824 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG04_825 SM00448 cheY-homologous receiver domain BG04_825 SM00862 Transcriptional regulatory protein, C terminal BG04_826 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG04_826 SM00387 Histidine kinase-like ATPases BG04_826 SM00388 His Kinase A (phosphoacceptor) domain BG04_829 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_829 SM00895 BG04_829 BG04_839 SM00382 ATPases associated with a variety of cellular activities BG04_849 SM00354 helix_turn _helix lactose operon repressor BG04_850 SM00387 Histidine kinase-like ATPases BG04_850 SM00388 His Kinase A (phosphoacceptor) domain BG04_855 SM01060 BG04_855 BG04_86 SM00829 Enoylreductase BG04_864 SM00060 Fibronectin type 3 domain BG04_879 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_88 SM00871 Bacterial transcription activator, effector binding domain BG04_894 SM00849 Metallo-beta-lactamase superfamily BG04_902 SM00257 Lysin motif BG04_903 SM00116 Domain in cystathionine beta-synthase and other proteins. BG04_903 SM01091 Transporter associated domain BG04_919 SM00382 ATPases associated with a variety of cellular activities BG04_920 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG04_927 SM00382 ATPases associated with a variety of cellular activities BG04_933 SM01061 CAT RNA binding domain BG04_943 SM00014 Acid phosphatase homologues BG04_946 SM00219 Tyrosine kinase, catalytic domain BG04_957 SM00882 Coenzyme A transferase BG04_958 SM00882 Coenzyme A transferase BG04_962 SM00091 PAS domain BG04_962 SM00387 Histidine kinase-like ATPases BG04_962 SM00388 His Kinase A (phosphoacceptor) domain BG04_984 SM01006 Siderophore biosynthesis protein domain BG04_991 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG04_991 SM00091 PAS domain BG04_991 SM00387 Histidine kinase-like ATPases BG04_991 SM00388 His Kinase A (phosphoacceptor) domain BG04_996 SM00091 PAS domain BG04_996 SM00382 ATPases associated with a variety of cellular activities