AS52_00028 SM00966 SpoVT / AbrB like domain AS52_00031 SM00493 AS52_00031 AS52_00032 SM00650 Ribosomal RNA adenine dimethylases AS52_00041 SM01400 AS52_00041 AS52_00045 SM00487 DEAD-like helicases superfamily AS52_00045 SM00490 helicase superfamily c-terminal domain AS52_00045 SM00982 AS52_00045 AS52_00045 SM01058 CarD-like/TRCF domain AS52_00046 SM00966 SpoVT / AbrB like domain AS52_00049 SM00363 S4 RNA-binding domain AS52_00053 SM00316 Ribosomal protein S1-like RNA-binding domain AS52_00056 SM00331 Sigma factor PP2C-like phosphatases AS52_00056 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AS52_00058 SM00220 Serine/Threonine protein kinases, catalytic domain AS52_00059 SM00977 TilS substrate C-terminal domain AS52_00061 SM00382 ATPases associated with a variety of cellular activities AS52_00068 SM00905 Dihydroneopterin aldolase AS52_00077 SM00382 ATPases associated with a variety of cellular activities AS52_00077 SM01086 C-terminal, D2-small domain, of ClpB protein AS52_00078 SM00382 ATPases associated with a variety of cellular activities AS52_00080 SM00670 Large family of predicted nucleotide-binding domains AS52_00085 SM00840 AS52_00085 AS52_00086 SM00535 Ribonuclease III family AS52_00087 SM00967 RNA 2'-O ribose methyltransferase substrate binding AS52_00089 SM00421 helix_turn_helix, Lux Regulon AS52_00092 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AS52_00092 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AS52_00093 SM00649 Ribosomal protein L11/L12 AS52_00099 SM00663 RNA polymerase I subunit A N-terminus AS52_00103 SM00838 Elongation factor G C-terminus AS52_00103 SM00889 Elongation factor G, domain IV AS52_00105 SM01403 AS52_00105 AS52_00109 SM01382 AS52_00109 AS52_00109 SM01383 AS52_00109 AS52_00112 SM00322 K homology RNA-binding domain AS52_00116 SM01374 AS52_00116 AS52_00117 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AS52_00129 SM00316 Ribosomal protein S1-like RNA-binding domain AS52_00133 SM00662 RNA polymerases D AS52_00135 SM00382 ATPases associated with a variety of cellular activities AS52_00136 SM00382 ATPases associated with a variety of cellular activities AS52_00142 SM00646 AS52_00142 AS52_00146 SM01251 AS52_00146 AS52_00170 SM00287 Bacterial SH3 domain homologues AS52_00178 SM00530 Helix-turn-helix XRE-family like proteins AS52_00179 SM00382 ATPases associated with a variety of cellular activities AS52_00184 SM00448 cheY-homologous receiver domain AS52_00184 SM00862 Transcriptional regulatory protein, C terminal AS52_00185 SM00387 Histidine kinase-like ATPases AS52_00185 SM00388 His Kinase A (phosphoacceptor) domain AS52_00188 SM00900 AS52_00188 AS52_00191 SM00487 DEAD-like helicases superfamily AS52_00191 SM00490 helicase superfamily c-terminal domain AS52_00196 SM01005 Alanine racemase, C-terminal domain AS52_00201 SM00387 Histidine kinase-like ATPases AS52_00202 SM00331 Sigma factor PP2C-like phosphatases AS52_00206 SM00331 Sigma factor PP2C-like phosphatases AS52_00207 SM00316 Ribosomal protein S1-like RNA-binding domain AS52_00207 SM00732 Likely ribonuclease with RNase H fold. AS52_00208 SM00731 SprT homologues. AS52_00229 SM00382 ATPases associated with a variety of cellular activities AS52_00230 SM00881 CoA binding domain AS52_00235 SM00883 Chaperonin 10 Kd subunit AS52_00241 SM00857 Resolvase, N terminal domain AS52_00254 SM00460 Transglutaminase/protease-like homologues AS52_00267 SM01001 AIR carboxylase AS52_00269 SM00998 Adenylosuccinate lyase C-terminus AS52_00272 SM01211 AS52_00272 AS52_00277 SM00798 AICARFT/IMPCHase bienzyme AS52_00277 SM00851 MGS-like domain AS52_00278 SM01209 AS52_00278 AS52_00278 SM01210 AS52_00278 AS52_00285 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS52_00285 SM00292 breast cancer carboxy-terminal domain AS52_00285 SM00532 Ligase N family AS52_00290 SM00845 GatB domain AS52_00291 SM00046 Diacylglycerol kinase catalytic domain (presumed) AS52_00299 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_00299 SM00387 Histidine kinase-like ATPases AS52_00299 SM00388 His Kinase A (phosphoacceptor) domain AS52_00303 SM00422 helix_turn_helix, mercury resistance AS52_00307 SM00382 ATPases associated with a variety of cellular activities AS52_00308 SM00062 Bacterial periplasmic substrate-binding proteins AS52_00308 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AS52_00315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_00315 SM00387 Histidine kinase-like ATPases AS52_00315 SM00388 His Kinase A (phosphoacceptor) domain AS52_00316 SM00448 cheY-homologous receiver domain AS52_00316 SM00862 Transcriptional regulatory protein, C terminal AS52_00317 SM00014 Acid phosphatase homologues AS52_00330 SM00091 PAS domain AS52_00330 SM00387 Histidine kinase-like ATPases AS52_00331 SM00448 cheY-homologous receiver domain AS52_00334 SM00091 PAS domain AS52_00334 SM00387 Histidine kinase-like ATPases AS52_00334 SM00388 His Kinase A (phosphoacceptor) domain AS52_00335 SM00487 DEAD-like helicases superfamily AS52_00335 SM00490 helicase superfamily c-terminal domain AS52_00347 SM01065 Starch binding domain AS52_00351 SM00382 ATPases associated with a variety of cellular activities AS52_00362 SM00226 Low molecular weight phosphatase family AS52_00368 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS52_00384 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AS52_00384 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_00384 SM00387 Histidine kinase-like ATPases AS52_00384 SM00388 His Kinase A (phosphoacceptor) domain AS52_00390 SM00822 AS52_00390 AS52_00395 SM00478 endonuclease III AS52_00395 SM00525 AS52_00395 AS52_00401 SM00382 ATPases associated with a variety of cellular activities AS52_00404 SM00382 ATPases associated with a variety of cellular activities AS52_00432 SM00873 B3/4 domain AS52_00433 SM00567 E-Z type HEAT repeats AS52_00437 SM00763 PrkA AAA domain AS52_00455 SM00729 Elongator protein 3, MiaB family, Radical SAM AS52_00455 SM00876 Biotin and Thiamin Synthesis associated domain AS52_00457 SM00382 ATPases associated with a variety of cellular activities AS52_00464 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AS52_00473 SM00257 Lysin motif AS52_00476 SM00287 Bacterial SH3 domain homologues AS52_00480 SM00155 Phospholipase D. Active site motifs. AS52_00486 SM00354 helix_turn _helix lactose operon repressor AS52_00493 SM00354 helix_turn _helix lactose operon repressor AS52_00498 SM00344 helix_turn_helix ASNC type AS52_00504 SM00363 S4 RNA-binding domain AS52_00509 SM00864 Tubulin/FtsZ family, GTPase domain AS52_00509 SM00865 Tubulin/FtsZ family, C-terminal domain AS52_00517 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AS52_00521 SM00829 Enoylreductase AS52_00525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS52_00525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_00542 SM00829 Enoylreductase AS52_00544 SM00382 ATPases associated with a variety of cellular activities AS52_00546 SM00062 Bacterial periplasmic substrate-binding proteins AS52_00546 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AS52_00556 SM00855 Phosphoglycerate mutase family AS52_00559 SM01091 Transporter associated domain AS52_00562 SM00382 ATPases associated with a variety of cellular activities AS52_00571 SM00729 Elongator protein 3, MiaB family, Radical SAM AS52_00574 SM00411 bacterial (prokaryotic) histone like domain AS52_00576 SM00382 ATPases associated with a variety of cellular activities AS52_00578 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS52_00584 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_00592 SM00382 ATPases associated with a variety of cellular activities AS52_00596 SM00014 Acid phosphatase homologues AS52_00606 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_00607 SM00342 helix_turn_helix, arabinose operon control protein AS52_00607 SM00448 cheY-homologous receiver domain AS52_00609 SM00849 Metallo-beta-lactamase superfamily AS52_00637 SM00914 AS52_00637 AS52_00640 SM00822 AS52_00640 AS52_00659 SM00938 Nitrogen regulatory protein P-II AS52_00661 SM00642 Alpha-amylase domain AS52_00662 SM00354 helix_turn _helix lactose operon repressor AS52_00667 SM00382 ATPases associated with a variety of cellular activities AS52_00678 SM00100 Cyclic nucleotide-monophosphate binding domain AS52_00678 SM00419 helix_turn_helix, cAMP Regulatory protein AS52_00679 SM00859 Semialdehyde dehydrogenase, NAD binding domain AS52_00683 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AS52_00684 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AS52_00688 SM00382 ATPases associated with a variety of cellular activities AS52_00688 SM01086 C-terminal, D2-small domain, of ClpB protein AS52_00690 SM00342 helix_turn_helix, arabinose operon control protein AS52_00700 SM00825 Beta-ketoacyl synthase AS52_00702 SM00382 ATPases associated with a variety of cellular activities AS52_00703 SM00382 ATPases associated with a variety of cellular activities AS52_00713 SM00382 ATPases associated with a variety of cellular activities AS52_00714 SM00382 ATPases associated with a variety of cellular activities AS52_00724 SM00155 Phospholipase D. Active site motifs. AS52_00731 SM01118 AS52_00731 AS52_00733 SM00954 Region found in RelA / SpoT proteins AS52_00737 SM00116 Domain in cystathionine beta-synthase and other proteins. AS52_00737 SM00924 MgtE intracellular N domain AS52_00759 SM01350 AS52_00759 AS52_00765 SM00344 helix_turn_helix ASNC type AS52_00770 SM00382 ATPases associated with a variety of cellular activities AS52_00773 SM00487 DEAD-like helicases superfamily AS52_00773 SM00490 helicase superfamily c-terminal domain AS52_00777 SM00849 Metallo-beta-lactamase superfamily AS52_00784 SM00091 PAS domain AS52_00784 SM00382 ATPases associated with a variety of cellular activities AS52_00787 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AS52_00787 SM00387 Histidine kinase-like ATPases AS52_00788 SM00448 cheY-homologous receiver domain AS52_00788 SM00850 LytTr DNA-binding domain AS52_00794 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AS52_00804 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AS52_00810 SM00448 cheY-homologous receiver domain AS52_00811 SM00387 Histidine kinase-like ATPases AS52_00824 SM00382 ATPases associated with a variety of cellular activities AS52_00828 SM00382 ATPases associated with a variety of cellular activities AS52_00843 SM00091 PAS domain AS52_00843 SM00387 Histidine kinase-like ATPases AS52_00844 SM00448 cheY-homologous receiver domain AS52_00850 SM00833 Cobalamin synthesis protein cobW C-terminal domain AS52_00853 SM00091 PAS domain AS52_00853 SM00382 ATPases associated with a variety of cellular activities AS52_00854 SM00829 Enoylreductase AS52_00859 SM00530 Helix-turn-helix XRE-family like proteins AS52_00864 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_00870 SM00091 PAS domain AS52_00870 SM00387 Histidine kinase-like ATPases AS52_00871 SM00448 cheY-homologous receiver domain AS52_00877 SM00116 Domain in cystathionine beta-synthase and other proteins. AS52_00877 SM00382 ATPases associated with a variety of cellular activities AS52_00893 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AS52_00893 SM01232 AS52_00893 AS52_00901 SM01130 AS52_00901 AS52_00905 SM00382 ATPases associated with a variety of cellular activities AS52_00910 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AS52_00917 SM00899 AS52_00917 AS52_00922 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS52_00923 SM00829 Enoylreductase AS52_00924 SM00382 ATPases associated with a variety of cellular activities AS52_00925 SM00382 ATPases associated with a variety of cellular activities AS52_00930 SM00346 helix_turn_helix isocitrate lyase regulation AS52_00933 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_00938 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_00939 SM00354 helix_turn _helix lactose operon repressor AS52_00942 SM00382 ATPases associated with a variety of cellular activities AS52_00946 SM00903 Flavin reductase like domain AS52_00952 SM00267 diguanylate cyclase AS52_00952 SM00448 cheY-homologous receiver domain AS52_00956 SM00448 cheY-homologous receiver domain AS52_00957 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AS52_00957 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_00957 SM00387 Histidine kinase-like ATPases AS52_00957 SM00388 His Kinase A (phosphoacceptor) domain AS52_00957 SM00448 cheY-homologous receiver domain AS52_00960 SM00855 Phosphoglycerate mutase family AS52_00970 SM00642 Alpha-amylase domain AS52_00971 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_00971 SM00866 AS52_00971 AS52_00972 SM00796 Allophanate hydrolase subunit 1 AS52_00973 SM00797 Allophanate hydrolase subunit 2 AS52_00982 SM00829 Enoylreductase AS52_00985 SM00796 Allophanate hydrolase subunit 1 AS52_00985 SM00797 Allophanate hydrolase subunit 2 AS52_00985 SM00878 Biotin carboxylase C-terminal domain AS52_00990 SM00357 Cold shock protein domain AS52_00998 SM00267 diguanylate cyclase AS52_01006 SM00854 Bacterial capsule synthesis protein PGA_cap AS52_01053 SM00052 Putative diguanylate phosphodiesterase AS52_01054 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AS52_01054 SM00091 PAS domain AS52_01054 SM00267 diguanylate cyclase AS52_01062 SM00387 Histidine kinase-like ATPases AS52_01063 SM00448 cheY-homologous receiver domain AS52_01067 SM00646 AS52_01067 AS52_01071 SM00914 AS52_01071 AS52_01073 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AS52_01076 SM00382 ATPases associated with a variety of cellular activities AS52_01082 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS52_01088 SM00052 Putative diguanylate phosphodiesterase AS52_01088 SM00267 diguanylate cyclase AS52_01088 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_01092 SM00052 Putative diguanylate phosphodiesterase AS52_01092 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AS52_01092 SM00091 PAS domain AS52_01092 SM00267 diguanylate cyclase AS52_01095 SM00382 ATPases associated with a variety of cellular activities AS52_01099 SM00028 Tetratricopeptide repeats AS52_01099 SM00271 DnaJ molecular chaperone homology domain AS52_01111 SM00530 Helix-turn-helix XRE-family like proteins AS52_01122 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS52_01122 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_01144 SM00984 UDP binding domain AS52_01160 SM00984 UDP binding domain AS52_01162 SM00382 ATPases associated with a variety of cellular activities AS52_01171 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_01171 SM00895 AS52_01171 AS52_01186 SM00465 GIY-YIG type nucleases (URI domain) AS52_01188 SM00835 Cupin AS52_01199 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_01199 SM00866 AS52_01199 AS52_01210 SM00382 ATPases associated with a variety of cellular activities AS52_01211 SM01091 Transporter associated domain AS52_01212 SM00422 helix_turn_helix, mercury resistance AS52_01221 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS52_01221 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_01234 SM00387 Histidine kinase-like ATPases AS52_01235 SM00448 cheY-homologous receiver domain AS52_01235 SM00850 LytTr DNA-binding domain AS52_01236 SM00382 ATPases associated with a variety of cellular activities AS52_01240 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_01245 SM00098 Alkaline phosphatase homologues AS52_01246 SM00448 cheY-homologous receiver domain AS52_01246 SM00850 LytTr DNA-binding domain AS52_01247 SM00091 PAS domain AS52_01247 SM00387 Histidine kinase-like ATPases AS52_01247 SM00388 His Kinase A (phosphoacceptor) domain AS52_01247 SM00448 cheY-homologous receiver domain AS52_01254 SM00822 AS52_01254 AS52_01259 SM00729 Elongator protein 3, MiaB family, Radical SAM AS52_01260 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_01260 SM00895 AS52_01260 AS52_01266 SM00091 PAS domain AS52_01266 SM00387 Histidine kinase-like ATPases AS52_01266 SM00388 His Kinase A (phosphoacceptor) domain AS52_01275 SM01007 Class II Aldolase and Adducin N-terminal domain AS52_01278 SM00382 ATPases associated with a variety of cellular activities AS52_01284 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_01286 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AS52_01286 SM00091 PAS domain AS52_01286 SM00387 Histidine kinase-like ATPases AS52_01286 SM00388 His Kinase A (phosphoacceptor) domain AS52_01288 SM00382 ATPases associated with a variety of cellular activities AS52_01288 SM01086 C-terminal, D2-small domain, of ClpB protein AS52_01292 SM00822 AS52_01292 AS52_01307 SM00257 Lysin motif AS52_01315 SM01018 B12 binding domain AS52_01322 SM01061 CAT RNA binding domain AS52_01334 SM00914 AS52_01334 AS52_01337 SM00260 Two component signalling adaptor domain AS52_01337 SM00448 cheY-homologous receiver domain AS52_01339 SM00257 Lysin motif AS52_01345 SM00052 Putative diguanylate phosphodiesterase AS52_01357 SM01350 AS52_01357 AS52_01358 SM00382 ATPases associated with a variety of cellular activities AS52_01359 SM00382 ATPases associated with a variety of cellular activities AS52_01361 SM00849 Metallo-beta-lactamase superfamily AS52_01368 SM00861 Transketolase, pyrimidine binding domain AS52_01380 SM00838 Elongation factor G C-terminus AS52_01386 SM00670 Large family of predicted nucleotide-binding domains AS52_01390 SM00878 Biotin carboxylase C-terminal domain AS52_01399 SM00116 Domain in cystathionine beta-synthase and other proteins. AS52_01406 SM00851 MGS-like domain AS52_01414 SM00479 AS52_01414 AS52_01414 SM00487 DEAD-like helicases superfamily AS52_01414 SM00491 AS52_01414 AS52_01421 SM00478 endonuclease III AS52_01421 SM00525 AS52_01421 AS52_01444 SM00357 Cold shock protein domain AS52_01447 SM00267 diguanylate cyclase AS52_01449 SM00487 DEAD-like helicases superfamily AS52_01449 SM00490 helicase superfamily c-terminal domain AS52_01457 SM00387 Histidine kinase-like ATPases AS52_01458 SM00421 helix_turn_helix, Lux Regulon AS52_01458 SM00448 cheY-homologous receiver domain AS52_01459 SM00642 Alpha-amylase domain AS52_01460 SM00981 AS52_01460 AS52_01465 SM00382 ATPases associated with a variety of cellular activities AS52_01467 SM00491 AS52_01467 AS52_01486 SM00357 Cold shock protein domain AS52_01489 SM00028 Tetratricopeptide repeats AS52_01494 SM00382 ATPases associated with a variety of cellular activities AS52_01498 SM00382 ATPases associated with a variety of cellular activities AS52_01502 SM00052 Putative diguanylate phosphodiesterase AS52_01502 SM00091 PAS domain AS52_01502 SM00267 diguanylate cyclase AS52_01508 SM00382 ATPases associated with a variety of cellular activities AS52_01515 SM00421 helix_turn_helix, Lux Regulon AS52_01515 SM00448 cheY-homologous receiver domain AS52_01521 SM00155 Phospholipase D. Active site motifs. AS52_01524 SM00257 Lysin motif AS52_01524 SM00636 AS52_01524 AS52_01535 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_01538 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_01545 SM00382 ATPases associated with a variety of cellular activities AS52_01554 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AS52_01558 SM00382 ATPases associated with a variety of cellular activities AS52_01562 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AS52_01562 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_01562 SM00387 Histidine kinase-like ATPases AS52_01562 SM00388 His Kinase A (phosphoacceptor) domain AS52_01562 SM00448 cheY-homologous receiver domain AS52_01563 SM00138 Methyltransferase, chemotaxis proteins AS52_01564 SM00331 Sigma factor PP2C-like phosphatases AS52_01564 SM00448 cheY-homologous receiver domain AS52_01567 SM00100 Cyclic nucleotide-monophosphate binding domain AS52_01571 SM00640 Glycosyl hydrolases family 32 AS52_01586 SM00849 Metallo-beta-lactamase superfamily AS52_01594 SM00354 helix_turn _helix lactose operon repressor AS52_01596 SM00640 Glycosyl hydrolases family 32 AS52_01599 SM00382 ATPases associated with a variety of cellular activities AS52_01604 SM00640 Glycosyl hydrolases family 32 AS52_01609 SM00382 ATPases associated with a variety of cellular activities AS52_01609 SM00930 AS52_01609 AS52_01623 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_01629 SM00382 ATPases associated with a variety of cellular activities AS52_01632 SM00822 AS52_01632 AS52_01633 SM00422 helix_turn_helix, mercury resistance AS52_01639 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_01641 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS52_01657 SM01061 CAT RNA binding domain AS52_01697 SM00342 helix_turn_helix, arabinose operon control protein AS52_01697 SM00871 Bacterial transcription activator, effector binding domain AS52_01712 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_01712 SM00866 AS52_01712 AS52_01719 SM00344 helix_turn_helix ASNC type AS52_01738 SM00357 Cold shock protein domain AS52_01748 SM00387 Histidine kinase-like ATPases AS52_01749 SM00257 Lysin motif AS52_01749 SM00636 AS52_01749 AS52_01754 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_01761 SM00226 Low molecular weight phosphatase family AS52_01763 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS52_01765 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS52_01770 SM00849 Metallo-beta-lactamase superfamily AS52_01772 SM00342 helix_turn_helix, arabinose operon control protein AS52_01774 SM01120 AS52_01774 AS52_01779 SM00478 endonuclease III AS52_01783 SM01022 AS52_01783 AS52_01784 SM00382 ATPases associated with a variety of cellular activities AS52_01803 SM00422 helix_turn_helix, mercury resistance AS52_01812 SM00860 SMI1 / KNR4 family AS52_01840 SM00860 SMI1 / KNR4 family AS52_01851 SM00382 ATPases associated with a variety of cellular activities AS52_01852 SM00382 ATPases associated with a variety of cellular activities AS52_01856 SM00062 Bacterial periplasmic substrate-binding proteins AS52_01856 SM00388 His Kinase A (phosphoacceptor) domain AS52_01857 SM00387 Histidine kinase-like ATPases AS52_01858 SM00382 ATPases associated with a variety of cellular activities AS52_01858 SM00448 cheY-homologous receiver domain AS52_01867 SM01130 AS52_01867 AS52_01873 SM00822 AS52_01873 AS52_01877 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains AS52_01881 SM00116 Domain in cystathionine beta-synthase and other proteins. AS52_01901 SM00861 Transketolase, pyrimidine binding domain AS52_01904 SM00382 ATPases associated with a variety of cellular activities AS52_01906 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_01918 SM00354 helix_turn _helix lactose operon repressor AS52_01920 SM00858 AS52_01920 AS52_01921 SM00710 Parallel beta-helix repeats AS52_01926 SM00914 AS52_01926 AS52_01928 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_01928 SM00387 Histidine kinase-like ATPases AS52_01928 SM00388 His Kinase A (phosphoacceptor) domain AS52_01929 SM00448 cheY-homologous receiver domain AS52_01929 SM00862 Transcriptional regulatory protein, C terminal AS52_01943 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS52_01945 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AS52_01945 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AS52_01945 SM00493 AS52_01945 AS52_01952 SM01329 AS52_01952 AS52_01957 SM00028 Tetratricopeptide repeats AS52_01957 SM00530 Helix-turn-helix XRE-family like proteins AS52_01966 SM00450 Rhodanese Homology Domain AS52_01982 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS52_01983 SM00382 ATPases associated with a variety of cellular activities AS52_01984 SM00567 E-Z type HEAT repeats AS52_01984 SM00932 Scaffold protein Nfu/NifU N terminal AS52_01996 SM00855 Phosphoglycerate mutase family AS52_02000 SM00422 helix_turn_helix, mercury resistance AS52_02002 SM00833 Cobalamin synthesis protein cobW C-terminal domain AS52_02004 SM00465 GIY-YIG type nucleases (URI domain) AS52_02006 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AS52_02006 SM00475 5'-3' exonuclease AS52_02015 SM00966 SpoVT / AbrB like domain AS52_02031 SM00387 Histidine kinase-like ATPases AS52_02031 SM00388 His Kinase A (phosphoacceptor) domain AS52_02034 SM00642 Alpha-amylase domain AS52_02047 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_02052 SM00448 cheY-homologous receiver domain AS52_02052 SM00862 Transcriptional regulatory protein, C terminal AS52_02053 SM00387 Histidine kinase-like ATPases AS52_02053 SM00388 His Kinase A (phosphoacceptor) domain AS52_02057 SM00919 Malic enzyme, NAD binding domain AS52_02057 SM01274 AS52_02057 AS52_02064 SM00062 Bacterial periplasmic substrate-binding proteins AS52_02067 SM00382 ATPases associated with a variety of cellular activities AS52_02068 SM00904 Riboflavin kinase AS52_02071 SM00646 AS52_02071 AS52_02074 SM00644 AS52_02074 AS52_02075 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_02075 SM00866 AS52_02075 AS52_02089 SM00919 Malic enzyme, NAD binding domain AS52_02089 SM01274 AS52_02089 AS52_02099 SM00422 helix_turn_helix, mercury resistance AS52_02115 SM00155 Phospholipase D. Active site motifs. AS52_02117 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_02126 SM00448 cheY-homologous receiver domain AS52_02126 SM00862 Transcriptional regulatory protein, C terminal AS52_02127 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_02127 SM00387 Histidine kinase-like ATPases AS52_02127 SM00388 His Kinase A (phosphoacceptor) domain AS52_02133 SM00382 ATPases associated with a variety of cellular activities AS52_02138 SM00420 helix_turn_helix, Deoxyribose operon repressor AS52_02138 SM01134 AS52_02138 AS52_02145 SM00422 helix_turn_helix, mercury resistance AS52_02147 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS52_02154 SM00257 Lysin motif AS52_02155 SM00354 helix_turn _helix lactose operon repressor AS52_02170 SM00530 Helix-turn-helix XRE-family like proteins AS52_02174 SM00382 ATPases associated with a variety of cellular activities AS52_02175 SM00327 von Willebrand factor (vWF) type A domain AS52_02177 SM01038 Beta galactosidase small chain AS52_02178 SM00342 helix_turn_helix, arabinose operon control protein AS52_02181 SM00382 ATPases associated with a variety of cellular activities AS52_02195 SM00448 cheY-homologous receiver domain AS52_02195 SM00862 Transcriptional regulatory protein, C terminal AS52_02196 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_02196 SM00387 Histidine kinase-like ATPases AS52_02196 SM00388 His Kinase A (phosphoacceptor) domain AS52_02197 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_02202 SM00530 Helix-turn-helix XRE-family like proteins AS52_02221 SM00530 Helix-turn-helix XRE-family like proteins AS52_02229 SM00316 Ribosomal protein S1-like RNA-binding domain AS52_02235 SM00028 Tetratricopeptide repeats AS52_02237 SM00342 helix_turn_helix, arabinose operon control protein AS52_02239 SM00382 ATPases associated with a variety of cellular activities AS52_02244 SM00382 ATPases associated with a variety of cellular activities AS52_02248 SM00354 helix_turn _helix lactose operon repressor AS52_02254 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AS52_02254 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AS52_02254 SM00493 AS52_02254 AS52_02261 SM00155 Phospholipase D. Active site motifs. AS52_02272 SM00091 PAS domain AS52_02272 SM00387 Histidine kinase-like ATPases AS52_02272 SM00388 His Kinase A (phosphoacceptor) domain AS52_02273 SM00382 ATPases associated with a variety of cellular activities AS52_02273 SM00448 cheY-homologous receiver domain AS52_02275 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AS52_02279 SM00829 Enoylreductase AS52_02290 SM00341 Helicase and RNase D C-terminal AS52_02290 SM00487 DEAD-like helicases superfamily AS52_02290 SM00490 helicase superfamily c-terminal domain AS52_02290 SM00956 AS52_02290 AS52_02291 SM00091 PAS domain AS52_02291 SM00382 ATPases associated with a variety of cellular activities AS52_02295 SM00490 helicase superfamily c-terminal domain AS52_02297 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AS52_02302 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_02303 SM00382 ATPases associated with a variety of cellular activities AS52_02309 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_02312 SM00849 Metallo-beta-lactamase superfamily AS52_02315 SM00257 Lysin motif AS52_02316 SM00382 ATPases associated with a variety of cellular activities AS52_02319 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AS52_02319 SM00138 Methyltransferase, chemotaxis proteins AS52_02319 SM00387 Histidine kinase-like ATPases AS52_02319 SM00388 His Kinase A (phosphoacceptor) domain AS52_02321 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AS52_02336 SM00287 Bacterial SH3 domain homologues AS52_02338 SM00028 Tetratricopeptide repeats AS52_02348 SM00479 AS52_02348 AS52_02353 SM00641 Glycosyl hydrolases family 25 AS52_02355 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AS52_02355 SM00091 PAS domain AS52_02355 SM00387 Histidine kinase-like ATPases AS52_02355 SM00388 His Kinase A (phosphoacceptor) domain AS52_02380 SM00091 PAS domain AS52_02380 SM00387 Histidine kinase-like ATPases AS52_02380 SM00388 His Kinase A (phosphoacceptor) domain AS52_02394 SM00829 Enoylreductase AS52_02398 SM00882 Coenzyme A transferase AS52_02399 SM00882 Coenzyme A transferase AS52_02409 SM00849 Metallo-beta-lactamase superfamily AS52_02415 SM00342 helix_turn_helix, arabinose operon control protein AS52_02417 SM01209 AS52_02417 AS52_02425 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_02430 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS52_02434 SM00450 Rhodanese Homology Domain AS52_02447 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS52_02448 SM00641 Glycosyl hydrolases family 25 AS52_02451 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_02455 SM00155 Phospholipase D. Active site motifs. AS52_02456 SM00849 Metallo-beta-lactamase superfamily AS52_02458 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS52_02473 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_02488 SM00838 Elongation factor G C-terminus AS52_02488 SM00889 Elongation factor G, domain IV AS52_02497 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS52_02497 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_02505 SM00346 helix_turn_helix isocitrate lyase regulation AS52_02506 SM00878 Biotin carboxylase C-terminal domain AS52_02508 SM00797 Allophanate hydrolase subunit 2 AS52_02509 SM00796 Allophanate hydrolase subunit 1 AS52_02513 SM00642 Alpha-amylase domain AS52_02514 SM00917 LeuA allosteric (dimerisation) domain AS52_02520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_02520 SM00387 Histidine kinase-like ATPases AS52_02520 SM00388 His Kinase A (phosphoacceptor) domain AS52_02521 SM00448 cheY-homologous receiver domain AS52_02521 SM00862 Transcriptional regulatory protein, C terminal AS52_02534 SM00871 Bacterial transcription activator, effector binding domain AS52_02543 SM00487 DEAD-like helicases superfamily AS52_02543 SM00490 helicase superfamily c-terminal domain AS52_02546 SM00421 helix_turn_helix, Lux Regulon AS52_02546 SM00448 cheY-homologous receiver domain AS52_02547 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AS52_02550 SM00530 Helix-turn-helix XRE-family like proteins AS52_02552 SM00773 Proposed nucleic acid binding domain AS52_02556 SM01131 AS52_02556 AS52_02562 SM00563 Phosphate acyltransferases AS52_02573 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_02591 SM00434 DNA Topoisomerase IV AS52_02592 SM00387 Histidine kinase-like ATPases AS52_02592 SM00433 TopoisomeraseII AS52_02593 SM00881 CoA binding domain AS52_02594 SM01207 AS52_02594 AS52_02607 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AS52_02623 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_02638 SM00422 helix_turn_helix, mercury resistance AS52_02640 SM00947 Carbonic anhydrase AS52_02642 SM00448 cheY-homologous receiver domain AS52_02642 SM00862 Transcriptional regulatory protein, C terminal AS52_02643 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_02643 SM00387 Histidine kinase-like ATPases AS52_02643 SM00388 His Kinase A (phosphoacceptor) domain AS52_02645 SM00860 SMI1 / KNR4 family AS52_02669 SM00914 AS52_02669 AS52_02675 SM00919 Malic enzyme, NAD binding domain AS52_02675 SM01274 AS52_02675 AS52_02678 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AS52_02693 SM00914 AS52_02693 AS52_02698 SM00382 ATPases associated with a variety of cellular activities AS52_02700 SM00421 helix_turn_helix, Lux Regulon AS52_02700 SM00448 cheY-homologous receiver domain AS52_02714 SM00382 ATPases associated with a variety of cellular activities AS52_02718 SM00248 ankyrin repeats AS52_02719 SM00028 Tetratricopeptide repeats AS52_02723 SM00248 ankyrin repeats AS52_02725 SM00860 SMI1 / KNR4 family AS52_02728 SM00248 ankyrin repeats AS52_02746 SM00860 SMI1 / KNR4 family AS52_02749 SM00248 ankyrin repeats AS52_02751 SM00860 SMI1 / KNR4 family AS52_02758 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_02763 SM00420 helix_turn_helix, Deoxyribose operon repressor AS52_02763 SM01134 AS52_02763 AS52_02772 SM00382 ATPases associated with a variety of cellular activities AS52_02775 SM00357 Cold shock protein domain AS52_02776 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_02778 SM00357 Cold shock protein domain AS52_02785 SM00829 Enoylreductase AS52_02787 SM00850 LytTr DNA-binding domain AS52_02790 SM00257 Lysin motif AS52_02793 SM00835 Cupin AS52_02800 SM00860 SMI1 / KNR4 family AS52_02804 SM00860 SMI1 / KNR4 family AS52_02818 SM00860 SMI1 / KNR4 family AS52_02819 SM00860 SMI1 / KNR4 family AS52_02820 SM00860 SMI1 / KNR4 family AS52_02861 SM00382 ATPases associated with a variety of cellular activities AS52_02866 SM00354 helix_turn _helix lactose operon repressor AS52_02882 SM00062 Bacterial periplasmic substrate-binding proteins AS52_02891 SM01133 AS52_02891 AS52_02892 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AS52_02895 SM00507 HNH nucleases AS52_02899 SM01207 AS52_02899 AS52_02903 SM00849 Metallo-beta-lactamase superfamily AS52_02914 SM00854 Bacterial capsule synthesis protein PGA_cap AS52_02916 SM00052 Putative diguanylate phosphodiesterase AS52_02932 SM00829 Enoylreductase AS52_02933 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_02933 SM00895 AS52_02933 AS52_02938 SM01091 Transporter associated domain AS52_02942 SM00382 ATPases associated with a variety of cellular activities AS52_02943 SM00382 ATPases associated with a variety of cellular activities AS52_02954 SM00318 Staphylococcal nuclease homologues AS52_02955 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AS52_02969 SM00346 helix_turn_helix isocitrate lyase regulation AS52_02980 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_02980 SM00895 AS52_02980 AS52_02985 SM00382 ATPases associated with a variety of cellular activities AS52_03005 SM00387 Histidine kinase-like ATPases AS52_03005 SM00388 His Kinase A (phosphoacceptor) domain AS52_03006 SM00448 cheY-homologous receiver domain AS52_03006 SM00862 Transcriptional regulatory protein, C terminal AS52_03011 SM00861 Transketolase, pyrimidine binding domain AS52_03019 SM00871 Bacterial transcription activator, effector binding domain AS52_03026 SM00382 ATPases associated with a variety of cellular activities AS52_03027 SM00382 ATPases associated with a variety of cellular activities AS52_03031 SM00938 Nitrogen regulatory protein P-II AS52_03041 SM01324 AS52_03041 AS52_03048 SM00382 ATPases associated with a variety of cellular activities AS52_03058 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AS52_03059 SM00354 helix_turn _helix lactose operon repressor AS52_03067 SM00563 Phosphate acyltransferases AS52_03074 SM00988 UreE urease accessory protein, N-terminal domain AS52_03079 SM00257 Lysin motif AS52_03080 SM00257 Lysin motif AS52_03089 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_03093 SM00382 ATPases associated with a variety of cellular activities AS52_03104 SM01091 Transporter associated domain AS52_03107 SM00116 Domain in cystathionine beta-synthase and other proteins. AS52_03114 SM00830 Chorismate mutase type II AS52_03124 SM01060 AS52_03124 AS52_03139 SM00116 Domain in cystathionine beta-synthase and other proteins. AS52_03147 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS52_03153 SM00287 Bacterial SH3 domain homologues AS52_03153 SM00646 AS52_03153 AS52_03155 SM00966 SpoVT / AbrB like domain AS52_03158 SM00240 Forkhead associated domain AS52_03158 SM00862 Transcriptional regulatory protein, C terminal AS52_03166 SM00046 Diacylglycerol kinase catalytic domain (presumed) AS52_03172 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AS52_03172 SM00091 PAS domain AS52_03184 SM00422 helix_turn_helix, mercury resistance AS52_03187 SM00870 AS52_03187 AS52_03188 SM00530 Helix-turn-helix XRE-family like proteins AS52_03192 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS52_03201 SM00919 Malic enzyme, NAD binding domain AS52_03201 SM01274 AS52_03201 AS52_03212 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_03213 SM00422 helix_turn_helix, mercury resistance AS52_03249 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS52_03254 SM00257 Lysin motif AS52_03254 SM00646 AS52_03254 AS52_03266 SM00829 Enoylreductase AS52_03269 SM00871 Bacterial transcription activator, effector binding domain AS52_03290 SM00357 Cold shock protein domain AS52_03299 SM00382 ATPases associated with a variety of cellular activities AS52_03302 SM00257 Lysin motif AS52_03313 SM00530 Helix-turn-helix XRE-family like proteins AS52_03315 SM00354 helix_turn _helix lactose operon repressor AS52_03318 SM00729 Elongator protein 3, MiaB family, Radical SAM AS52_03341 SM00342 helix_turn_helix, arabinose operon control protein AS52_03343 SM00421 helix_turn_helix, Lux Regulon AS52_03343 SM00448 cheY-homologous receiver domain AS52_03353 SM01350 AS52_03353 AS52_03354 SM00861 Transketolase, pyrimidine binding domain AS52_03361 SM00382 ATPases associated with a variety of cellular activities AS52_03363 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_03363 SM00387 Histidine kinase-like ATPases AS52_03363 SM00388 His Kinase A (phosphoacceptor) domain AS52_03364 SM00448 cheY-homologous receiver domain AS52_03364 SM00862 Transcriptional regulatory protein, C terminal AS52_03368 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AS52_03368 SM00387 Histidine kinase-like ATPases AS52_03368 SM00388 His Kinase A (phosphoacceptor) domain AS52_03373 SM00422 helix_turn_helix, mercury resistance AS52_03386 SM00382 ATPases associated with a variety of cellular activities AS52_03412 SM00829 Enoylreductase AS52_03413 SM00448 cheY-homologous receiver domain AS52_03413 SM00862 Transcriptional regulatory protein, C terminal AS52_03414 SM00387 Histidine kinase-like ATPases AS52_03415 SM00382 ATPases associated with a variety of cellular activities AS52_03425 SM00450 Rhodanese Homology Domain AS52_03425 SM00849 Metallo-beta-lactamase superfamily AS52_03426 SM00450 Rhodanese Homology Domain AS52_03427 SM00450 Rhodanese Homology Domain AS52_03428 SM00450 Rhodanese Homology Domain AS52_03439 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_03439 SM00866 AS52_03439 AS52_03443 SM00894 Excalibur calcium-binding domain AS52_03445 SM00530 Helix-turn-helix XRE-family like proteins AS52_03454 SM00267 diguanylate cyclase AS52_03487 SM00357 Cold shock protein domain AS52_03489 SM00357 Cold shock protein domain AS52_03495 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_03495 SM00895 AS52_03495 AS52_03499 SM00530 Helix-turn-helix XRE-family like proteins AS52_03505 SM00829 Enoylreductase AS52_03509 SM00382 ATPases associated with a variety of cellular activities AS52_03531 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_03531 SM00387 Histidine kinase-like ATPases AS52_03531 SM00388 His Kinase A (phosphoacceptor) domain AS52_03532 SM00448 cheY-homologous receiver domain AS52_03532 SM00862 Transcriptional regulatory protein, C terminal AS52_03535 SM00382 ATPases associated with a variety of cellular activities AS52_03543 SM00829 Enoylreductase AS52_03544 SM00422 helix_turn_helix, mercury resistance AS52_03552 SM00357 Cold shock protein domain AS52_03554 SM00248 ankyrin repeats AS52_03555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS52_03556 SM00091 PAS domain AS52_03556 SM00267 diguanylate cyclase AS52_03557 SM00287 Bacterial SH3 domain homologues AS52_03567 SM00631 AS52_03567 AS52_03574 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_03574 SM00895 AS52_03574 AS52_03580 SM00420 helix_turn_helix, Deoxyribose operon repressor AS52_03580 SM01134 AS52_03580 AS52_03592 SM00530 Helix-turn-helix XRE-family like proteins AS52_03600 SM01007 Class II Aldolase and Adducin N-terminal domain AS52_03602 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_03603 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS52_03606 SM00382 ATPases associated with a variety of cellular activities AS52_03616 SM00899 AS52_03616 AS52_03622 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_03639 SM00028 Tetratricopeptide repeats AS52_03645 SM00860 SMI1 / KNR4 family AS52_03680 SM00357 Cold shock protein domain AS52_03682 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS52_03684 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_03688 SM00829 Enoylreductase AS52_03696 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AS52_03699 SM00346 helix_turn_helix isocitrate lyase regulation AS52_03701 SM00382 ATPases associated with a variety of cellular activities AS52_03707 SM00422 helix_turn_helix, mercury resistance AS52_03709 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_03714 SM00833 Cobalamin synthesis protein cobW C-terminal domain AS52_03716 SM00833 Cobalamin synthesis protein cobW C-terminal domain AS52_03719 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_03719 SM00866 AS52_03719 AS52_03736 SM00530 Helix-turn-helix XRE-family like proteins AS52_03738 SM00344 helix_turn_helix ASNC type AS52_03760 SM00640 Glycosyl hydrolases family 32 AS52_03761 SM00642 Alpha-amylase domain AS52_03762 SM00354 helix_turn _helix lactose operon repressor AS52_03782 SM00870 AS52_03782 AS52_03785 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AS52_03785 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AS52_03790 SM00014 Acid phosphatase homologues AS52_03791 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_03791 SM00387 Histidine kinase-like ATPases AS52_03791 SM00388 His Kinase A (phosphoacceptor) domain AS52_03792 SM00448 cheY-homologous receiver domain AS52_03792 SM00862 Transcriptional regulatory protein, C terminal AS52_03793 SM00448 cheY-homologous receiver domain AS52_03793 SM00862 Transcriptional regulatory protein, C terminal AS52_03799 SM01266 AS52_03799 AS52_03802 SM00530 Helix-turn-helix XRE-family like proteins AS52_03822 SM00530 Helix-turn-helix XRE-family like proteins AS52_03825 SM00342 helix_turn_helix, arabinose operon control protein AS52_03825 SM00871 Bacterial transcription activator, effector binding domain AS52_03830 SM00852 Probable molybdopterin binding domain AS52_03832 SM00852 Probable molybdopterin binding domain AS52_03836 SM00382 ATPases associated with a variety of cellular activities AS52_03856 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_03860 SM00357 Cold shock protein domain AS52_03872 SM00052 Putative diguanylate phosphodiesterase AS52_03872 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AS52_03872 SM00267 diguanylate cyclase AS52_03878 SM00966 SpoVT / AbrB like domain AS52_03893 SM00422 helix_turn_helix, mercury resistance AS52_03896 SM00422 helix_turn_helix, mercury resistance AS52_03899 SM00640 Glycosyl hydrolases family 32 AS52_03907 SM00382 ATPases associated with a variety of cellular activities AS52_03909 SM00387 Histidine kinase-like ATPases AS52_03909 SM00388 His Kinase A (phosphoacceptor) domain AS52_03910 SM00448 cheY-homologous receiver domain AS52_03910 SM00862 Transcriptional regulatory protein, C terminal AS52_03924 SM00984 UDP binding domain AS52_03929 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS52_03930 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_03946 SM00344 helix_turn_helix ASNC type AS52_03948 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS52_03949 SM00448 cheY-homologous receiver domain AS52_03949 SM00862 Transcriptional regulatory protein, C terminal AS52_03950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_03950 SM00387 Histidine kinase-like ATPases AS52_03950 SM00388 His Kinase A (phosphoacceptor) domain AS52_03953 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_03953 SM00895 AS52_03953 AS52_03963 SM00382 ATPases associated with a variety of cellular activities AS52_03973 SM00354 helix_turn _helix lactose operon repressor AS52_03974 SM00387 Histidine kinase-like ATPases AS52_03974 SM00388 His Kinase A (phosphoacceptor) domain AS52_03979 SM01060 AS52_03979 AS52_04002 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_04017 SM00849 Metallo-beta-lactamase superfamily AS52_04025 SM00257 Lysin motif AS52_04026 SM00116 Domain in cystathionine beta-synthase and other proteins. AS52_04026 SM01091 Transporter associated domain AS52_04043 SM00382 ATPases associated with a variety of cellular activities AS52_04044 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_04051 SM00382 ATPases associated with a variety of cellular activities AS52_04057 SM01061 CAT RNA binding domain AS52_04067 SM00014 Acid phosphatase homologues AS52_04070 SM00219 Tyrosine kinase, catalytic domain AS52_04081 SM00882 Coenzyme A transferase AS52_04082 SM00882 Coenzyme A transferase AS52_04086 SM00091 PAS domain AS52_04086 SM00387 Histidine kinase-like ATPases AS52_04086 SM00388 His Kinase A (phosphoacceptor) domain AS52_04094 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_04094 SM00387 Histidine kinase-like ATPases AS52_04094 SM00388 His Kinase A (phosphoacceptor) domain AS52_04105 SM01006 Siderophore biosynthesis protein domain AS52_04112 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AS52_04112 SM00091 PAS domain AS52_04112 SM00387 Histidine kinase-like ATPases AS52_04112 SM00388 His Kinase A (phosphoacceptor) domain AS52_04117 SM00091 PAS domain AS52_04117 SM00382 ATPases associated with a variety of cellular activities AS52_04124 SM00382 ATPases associated with a variety of cellular activities AS52_04125 SM00382 ATPases associated with a variety of cellular activities AS52_04128 SM00861 Transketolase, pyrimidine binding domain AS52_04130 SM00857 Resolvase, N terminal domain AS52_04139 SM00257 Lysin motif AS52_04139 SM00646 AS52_04139 AS52_04141 SM01230 AS52_04141 AS52_04142 SM00422 helix_turn_helix, mercury resistance AS52_04146 SM00382 ATPases associated with a variety of cellular activities AS52_04149 SM00853 MutL C terminal dimerisation domain AS52_04149 SM01340 AS52_04149 AS52_04150 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AS52_04150 SM00534 ATPase domain of DNA mismatch repair MUTS family AS52_04154 SM00729 Elongator protein 3, MiaB family, Radical SAM AS52_04160 SM00322 K homology RNA-binding domain AS52_04160 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS52_04161 SM00382 ATPases associated with a variety of cellular activities AS52_04162 SM00852 Probable molybdopterin binding domain AS52_04164 SM00530 Helix-turn-helix XRE-family like proteins AS52_04172 SM00382 ATPases associated with a variety of cellular activities AS52_04174 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_04174 SM00866 AS52_04174 AS52_04175 SM00382 ATPases associated with a variety of cellular activities AS52_04175 SM00843 AS52_04175 AS52_04178 SM00849 Metallo-beta-lactamase superfamily AS52_04179 SM01130 AS52_04179 AS52_04181 SM00859 Semialdehyde dehydrogenase, NAD binding domain AS52_04187 SM00316 Ribosomal protein S1-like RNA-binding domain AS52_04187 SM00322 K homology RNA-binding domain AS52_04188 SM01387 AS52_04188 AS52_04189 SM00904 Riboflavin kinase AS52_04196 SM00316 Ribosomal protein S1-like RNA-binding domain AS52_04196 SM00322 K homology RNA-binding domain AS52_04198 SM00479 AS52_04198 AS52_04198 SM00481 DNA polymerase alpha chain like domain AS52_04200 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS52_04211 SM00260 Two component signalling adaptor domain AS52_04212 SM00073 Histidine Phosphotransfer domain AS52_04212 SM00260 Two component signalling adaptor domain AS52_04212 SM00387 Histidine kinase-like ATPases AS52_04212 SM01231 AS52_04212 AS52_04213 SM00448 cheY-homologous receiver domain AS52_04215 SM00382 ATPases associated with a variety of cellular activities AS52_04215 SM00962 SRP54-type protein, GTPase domain AS52_04222 SM00448 cheY-homologous receiver domain AS52_04232 SM00382 ATPases associated with a variety of cellular activities AS52_04240 SM00382 ATPases associated with a variety of cellular activities AS52_04240 SM01086 C-terminal, D2-small domain, of ClpB protein AS52_04244 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AS52_04244 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AS52_04244 SM00493 AS52_04244 AS52_04246 SM00881 CoA binding domain AS52_04257 SM00382 ATPases associated with a variety of cellular activities AS52_04257 SM00962 SRP54-type protein, GTPase domain AS52_04257 SM00963 SRP54-type protein, helical bundle domain AS52_04259 SM00382 ATPases associated with a variety of cellular activities AS52_04259 SM00962 SRP54-type protein, GTPase domain AS52_04259 SM00963 SRP54-type protein, helical bundle domain AS52_04260 SM00968 SMC proteins Flexible Hinge Domain AS52_04261 SM00358 Double-stranded RNA binding motif AS52_04261 SM00535 Ribonuclease III family AS52_04263 SM00822 AS52_04263 AS52_04264 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AS52_04267 SM00487 DEAD-like helicases superfamily AS52_04267 SM00490 helicase superfamily c-terminal domain AS52_04271 SM01120 AS52_04271 AS52_04271 SM01121 AS52_04271 AS52_04274 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AS52_04277 SM00220 Serine/Threonine protein kinases, catalytic domain AS52_04277 SM00740 AS52_04277 AS52_04278 SM00331 Sigma factor PP2C-like phosphatases AS52_04278 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AS52_04283 SM00487 DEAD-like helicases superfamily AS52_04283 SM00490 helicase superfamily c-terminal domain AS52_04285 SM01409 AS52_04285 AS52_04286 SM00072 Guanylate kinase homologues. AS52_04289 SM00831 Cation transporter/ATPase, N-terminus AS52_04292 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AS52_04295 SM00851 MGS-like domain AS52_04295 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AS52_04295 SM01209 AS52_04295 AS52_04296 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AS52_04301 SM00363 S4 RNA-binding domain AS52_04306 SM00363 S4 RNA-binding domain AS52_04315 SM00864 Tubulin/FtsZ family, GTPase domain AS52_04315 SM00865 Tubulin/FtsZ family, C-terminal domain AS52_04316 SM00842 Cell division protein FtsA AS52_04323 SM00740 AS52_04323 AS52_04324 SM00740 AS52_04324 AS52_04332 SM00878 Biotin carboxylase C-terminal domain AS52_04339 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS52_04356 SM00914 AS52_04356 AS52_04357 SM00028 Tetratricopeptide repeats AS52_04368 SM00138 Methyltransferase, chemotaxis proteins AS52_04369 SM00562 AS52_04369 AS52_04375 SM00411 bacterial (prokaryotic) histone like domain AS52_04384 SM01240 AS52_04384 AS52_04385 SM00316 Ribosomal protein S1-like RNA-binding domain AS52_04386 SM00563 Phosphate acyltransferases AS52_04393 SM00870 AS52_04393 AS52_04395 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS52_04397 SM00422 helix_turn_helix, mercury resistance AS52_04402 SM00487 DEAD-like helicases superfamily AS52_04402 SM00490 helicase superfamily c-terminal domain AS52_04407 SM00257 Lysin motif AS52_04408 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_04408 SM00387 Histidine kinase-like ATPases AS52_04408 SM00388 His Kinase A (phosphoacceptor) domain AS52_04409 SM00448 cheY-homologous receiver domain AS52_04409 SM00862 Transcriptional regulatory protein, C terminal AS52_04413 SM00363 S4 RNA-binding domain AS52_04432 SM00387 Histidine kinase-like ATPases AS52_04434 SM00936 Penicillin-binding protein 5, C-terminal domain AS52_04445 SM00882 Coenzyme A transferase AS52_04446 SM00882 Coenzyme A transferase AS52_04451 SM00704 CDGSH-type zinc finger. Function unknown. AS52_04453 SM00849 Metallo-beta-lactamase superfamily AS52_04471 SM00382 ATPases associated with a variety of cellular activities AS52_04473 SM00062 Bacterial periplasmic substrate-binding proteins AS52_04473 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AS52_04479 SM00861 Transketolase, pyrimidine binding domain AS52_04483 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS52_04485 SM00091 PAS domain AS52_04485 SM00382 ATPases associated with a variety of cellular activities AS52_04490 SM00448 cheY-homologous receiver domain AS52_04491 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS52_04494 SM00363 S4 RNA-binding domain AS52_04495 SM00861 Transketolase, pyrimidine binding domain AS52_04501 SM00878 Biotin carboxylase C-terminal domain AS52_04510 SM00382 ATPases associated with a variety of cellular activities AS52_04512 SM00841 Elongation factor P, C-terminal AS52_04512 SM01185 AS52_04512 AS52_04519 SM00529 Helix-turn-helix diphteria tox regulatory element AS52_04522 SM00450 Rhodanese Homology Domain AS52_04526 SM00487 DEAD-like helicases superfamily AS52_04526 SM00490 helicase superfamily c-terminal domain AS52_04535 SM00382 ATPases associated with a variety of cellular activities AS52_04538 SM00849 Metallo-beta-lactamase superfamily AS52_04540 SM00631 AS52_04540 AS52_04543 SM00028 Tetratricopeptide repeats AS52_04552 SM00382 ATPases associated with a variety of cellular activities AS52_04570 SM00382 ATPases associated with a variety of cellular activities AS52_04572 SM00518 AP endonuclease family 2 AS52_04573 SM00487 DEAD-like helicases superfamily AS52_04573 SM00490 helicase superfamily c-terminal domain AS52_04581 SM00400 zinc finger AS52_04581 SM00493 AS52_04581 AS52_04584 SM00116 Domain in cystathionine beta-synthase and other proteins. AS52_04591 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS52_04592 SM00322 K homology RNA-binding domain AS52_04596 SM00244 prohibitin homologues AS52_04600 SM00729 Elongator protein 3, MiaB family, Radical SAM AS52_04603 SM00271 DnaJ molecular chaperone homology domain AS52_04607 SM00729 Elongator protein 3, MiaB family, Radical SAM AS52_04608 SM00838 Elongation factor G C-terminus AS52_04614 SM00849 Metallo-beta-lactamase superfamily AS52_04616 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS52_04620 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS52_04622 SM01103 AS52_04622 AS52_04642 SM00382 ATPases associated with a variety of cellular activities AS52_04648 SM00732 Likely ribonuclease with RNase H fold. AS52_04650 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AS52_04654 SM00382 ATPases associated with a variety of cellular activities AS52_04655 SM00028 Tetratricopeptide repeats AS52_04659 SM00382 ATPases associated with a variety of cellular activities AS52_04668 SM00287 Bacterial SH3 domain homologues AS52_04668 SM00646 AS52_04668 AS52_04670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS52_04670 SM00954 Region found in RelA / SpoT proteins AS52_04678 SM01323 AS52_04678 AS52_04682 SM00382 ATPases associated with a variety of cellular activities AS52_04683 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS52_04688 SM00257 Lysin motif AS52_04697 SM01317 AS52_04697 AS52_04701 SM00316 Ribosomal protein S1-like RNA-binding domain AS52_04718 SM00257 Lysin motif AS52_04720 SM01004 Delta-aminolevulinic acid dehydratase AS52_04727 SM00382 ATPases associated with a variety of cellular activities AS52_04727 SM00464 Found in ATP-dependent protease La (LON) AS52_04728 SM00382 ATPases associated with a variety of cellular activities AS52_04729 SM00382 ATPases associated with a variety of cellular activities AS52_04729 SM00994 ClpX C4-type zinc finger AS52_04729 SM01086 C-terminal, D2-small domain, of ClpB protein AS52_04734 SM01329 AS52_04734 AS52_04735 SM00917 LeuA allosteric (dimerisation) domain AS52_04743 SM00909 Sporulation and spore germination AS52_04745 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_04754 SM00062 Bacterial periplasmic substrate-binding proteins AS52_04755 SM00382 ATPases associated with a variety of cellular activities AS52_04759 SM00421 helix_turn_helix, Lux Regulon AS52_04766 SM00465 GIY-YIG type nucleases (URI domain) AS52_04768 SM00893 Electron transfer flavoprotein domain AS52_04769 SM00893 Electron transfer flavoprotein domain AS52_04775 SM00463 Small MutS-related domain AS52_04775 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AS52_04775 SM00534 ATPase domain of DNA mismatch repair MUTS family AS52_04776 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS52_04776 SM00481 DNA polymerase alpha chain like domain AS52_04776 SM00483 DNA polymerase X family AS52_04780 SM00873 B3/4 domain AS52_04780 SM00874 tRNA synthetase B5 domain AS52_04780 SM00896 Ferredoxin-fold anticodon binding domain AS52_04782 SM00967 RNA 2'-O ribose methyltransferase substrate binding AS52_04791 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AS52_04798 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS52_04801 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AS52_04801 SM01232 AS52_04801 AS52_04802 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AS52_04802 SM00474 3'-5' exonuclease AS52_04802 SM00475 5'-3' exonuclease AS52_04802 SM00482 DNA polymerase A domain AS52_04803 SM00091 PAS domain AS52_04803 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_04803 SM00387 Histidine kinase-like ATPases AS52_04803 SM00388 His Kinase A (phosphoacceptor) domain AS52_04804 SM00448 cheY-homologous receiver domain AS52_04804 SM00862 Transcriptional regulatory protein, C terminal AS52_04807 SM01329 AS52_04807 AS52_04815 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS52_04816 SM00919 Malic enzyme, NAD binding domain AS52_04816 SM01274 AS52_04816 AS52_04817 SM00481 DNA polymerase alpha chain like domain AS52_04822 SM00116 Domain in cystathionine beta-synthase and other proteins. AS52_04824 SM00849 Metallo-beta-lactamase superfamily AS52_04825 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AS52_04825 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AS52_04841 SM00981 AS52_04841 AS52_04847 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AS52_04848 SM00363 S4 RNA-binding domain AS52_04848 SM01390 AS52_04848 AS52_04849 SM00363 S4 RNA-binding domain AS52_04852 SM00116 Domain in cystathionine beta-synthase and other proteins. AS52_04856 SM00354 helix_turn _helix lactose operon repressor AS52_04857 SM00830 Chorismate mutase type II AS52_04864 SM00382 ATPases associated with a variety of cellular activities AS52_04864 SM00843 AS52_04864 AS52_04871 SM00849 Metallo-beta-lactamase superfamily AS52_04875 SM00642 Alpha-amylase domain AS52_04880 SM00420 helix_turn_helix, Deoxyribose operon repressor AS52_04881 SM00363 S4 RNA-binding domain AS52_04885 SM00450 Rhodanese Homology Domain AS52_04891 SM00729 Elongator protein 3, MiaB family, Radical SAM AS52_04897 SM00014 Acid phosphatase homologues AS52_04904 SM00382 ATPases associated with a variety of cellular activities AS52_04911 SM00947 Carbonic anhydrase AS52_04912 SM00833 Cobalamin synthesis protein cobW C-terminal domain AS52_04923 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AS52_04936 SM00642 Alpha-amylase domain AS52_04984 SM00316 Ribosomal protein S1-like RNA-binding domain AS52_04986 SM00344 helix_turn_helix ASNC type AS52_04991 SM01298 AS52_04991 AS52_04992 SM00479 AS52_04992 AS52_04995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS52_05022 SM00729 Elongator protein 3, MiaB family, Radical SAM AS52_05033 SM00382 ATPases associated with a variety of cellular activities AS52_05037 SM00382 ATPases associated with a variety of cellular activities AS52_05037 SM00930 AS52_05037 AS52_05039 SM00493 AS52_05039 AS52_05050 SM00382 ATPases associated with a variety of cellular activities AS52_05065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_05065 SM00387 Histidine kinase-like ATPases AS52_05065 SM00388 His Kinase A (phosphoacceptor) domain AS52_05066 SM00448 cheY-homologous receiver domain AS52_05066 SM00862 Transcriptional regulatory protein, C terminal AS52_05068 SM00014 Acid phosphatase homologues AS52_05069 SM00347 helix_turn_helix multiple antibiotic resistance protein AS52_05074 SM00852 Probable molybdopterin binding domain AS52_05077 SM00729 Elongator protein 3, MiaB family, Radical SAM AS52_05080 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AS52_05080 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS52_05086 SM00316 Ribosomal protein S1-like RNA-binding domain AS52_05086 SM00357 Cold shock protein domain AS52_05086 SM00955 AS52_05086 AS52_05089 SM01192 AS52_05089 AS52_05089 SM01193 AS52_05089 AS52_05093 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS52_05106 SM00028 Tetratricopeptide repeats AS52_05123 SM00382 ATPases associated with a variety of cellular activities AS52_05124 SM00487 DEAD-like helicases superfamily AS52_05124 SM00490 helicase superfamily c-terminal domain AS52_05125 SM00091 PAS domain AS52_05125 SM00382 ATPases associated with a variety of cellular activities AS52_05128 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS52_05129 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS52_05129 SM00245 tail specific protease AS52_05132 SM00382 ATPases associated with a variety of cellular activities AS52_05138 SM00937 AS52_05138 AS52_05139 SM00957 SecA DEAD-like domain AS52_05139 SM00958 SecA preprotein cross-linking domain AS52_05159 SM00487 DEAD-like helicases superfamily AS52_05159 SM00490 helicase superfamily c-terminal domain AS52_05163 SM00421 helix_turn_helix, Lux Regulon AS52_05163 SM00448 cheY-homologous receiver domain AS52_05164 SM00387 Histidine kinase-like ATPases AS52_05169 SM00244 prohibitin homologues AS52_05171 SM00984 UDP binding domain AS52_05174 SM00487 DEAD-like helicases superfamily AS52_05174 SM00490 helicase superfamily c-terminal domain AS52_05175 SM00257 Lysin motif AS52_05179 SM00530 Helix-turn-helix XRE-family like proteins AS52_05191 SM00382 ATPases associated with a variety of cellular activities AS52_05206 SM00226 Low molecular weight phosphatase family AS52_05213 SM00937 AS52_05213 AS52_05216 SM00357 Cold shock protein domain AS52_05216 SM00382 ATPases associated with a variety of cellular activities AS52_05216 SM00959 Rho termination factor, N-terminal domain AS52_05220 SM00448 cheY-homologous receiver domain AS52_05231 SM00155 Phospholipase D. Active site motifs. AS52_05233 SM00836 DALR anticodon binding domain AS52_05233 SM01016 Arginyl tRNA synthetase N terminal dom AS52_05242 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS52_05252 SM00986 Uracil DNA glycosylase superfamily AS52_05252 SM00987 UreE urease accessory protein, C-terminal domain AS52_05255 SM01350 AS52_05255 AS52_05257 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AS52_05257 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AS52_05272 SM00382 ATPases associated with a variety of cellular activities AS52_05273 SM00382 ATPases associated with a variety of cellular activities AS52_05278 SM00354 helix_turn _helix lactose operon repressor AS52_05284 SM01060 AS52_05284 AS52_05286 SM00642 Alpha-amylase domain AS52_05288 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AS52_05290 SM00448 cheY-homologous receiver domain AS52_05290 SM00862 Transcriptional regulatory protein, C terminal AS52_05291 SM00387 Histidine kinase-like ATPases AS52_05291 SM00388 His Kinase A (phosphoacceptor) domain AS52_05297 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS52_05298 SM00849 Metallo-beta-lactamase superfamily AS52_05301 SM00091 PAS domain AS52_05301 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS52_05301 SM00387 Histidine kinase-like ATPases AS52_05301 SM00388 His Kinase A (phosphoacceptor) domain AS52_05302 SM00448 cheY-homologous receiver domain AS52_05302 SM00862 Transcriptional regulatory protein, C terminal AS52_05307 SM00788 Adenylosuccinate synthetase AS52_05310 SM00267 diguanylate cyclase AS52_05320 SM00470 ParB-like nuclease domain AS52_05322 SM00470 ParB-like nuclease domain AS52_05324 SM01228 AS52_05324 AS52_05326 SM00393 Putative single-stranded nucleic acids-binding domain AS52_05326 SM01245 AS52_05326 AS52_05330 SM00382 ATPases associated with a variety of cellular activities AS52_05330 SM00760 Bacterial dnaA protein helix-turn-helix domain AS52_05331 SM00480 DNA polymerase III beta subunit AS52_05334 SM00387 Histidine kinase-like ATPases AS52_05334 SM00433 TopoisomeraseII AS52_05335 SM00434 DNA Topoisomerase IV AS52_05342 SM00116 Domain in cystathionine beta-synthase and other proteins. AS52_05342 SM01240 AS52_05342 AS52_05343 SM00936 Penicillin-binding protein 5, C-terminal domain AS52_05350 SM00257 Lysin motif AS52_05350 SM00636 AS52_05350 AS52_05353 SM00382 ATPases associated with a variety of cellular activities AS52_05355 SM00493 AS52_05355 AS52_05419 SM00112 Cadherin repeats. AS52_05421 SM00112 Cadherin repeats. AS52_05425 SM00422 helix_turn_helix, mercury resistance AS52_05436 SM00914 AS52_05436 AS52_05437 SM00857 Resolvase, N terminal domain