locus-tag class description BMQ_0001 PF11638 DnaA N-terminal domain BMQ_0001 PF08299 Bacterial dnaA protein helix-turn-helix BMQ_0001 PF00308 Bacterial dnaA protein BMQ_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain BMQ_0002 PF02767 DNA polymerase III beta subunit, central domain BMQ_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain BMQ_0004 PF02463 RecF/RecN/SMC N terminal domain BMQ_0005 PF00986 DNA gyrase B subunit, carboxyl terminus BMQ_0005 PF01751 Toprim domain BMQ_0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_0005 PF00204 DNA gyrase B BMQ_0006 PF03989 DNA gyrase C-terminal domain, beta-propeller BMQ_0006 PF00521 DNA gyrase/topoisomerase IV, subunit A BMQ_0012 PF14175 YaaC-like Protein BMQ_0013 PF00571 CBS domain BMQ_0013 PF00478 IMP dehydrogenase / GMP reductase domain BMQ_0014 PF00768 D-alanyl-D-alanine carboxypeptidase BMQ_0014 PF07943 Penicillin-binding protein 5, C-terminal domain BMQ_0015 PF01680 SOR/SNZ family BMQ_0016 PF01174 SNO glutamine amidotransferase family BMQ_0017 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BMQ_0017 PF02403 Seryl-tRNA synthetase N-terminal domain BMQ_0019 PF01712 Deoxynucleoside kinase BMQ_0020 PF01712 Deoxynucleoside kinase BMQ_0021 PF01476 LysM domain BMQ_0021 PF00704 Glycosyl hydrolases family 18 BMQ_0022 PF00857 Isochorismatase family BMQ_0023 PF14437 MafB19-like deaminase BMQ_0024 PF12169 DNA polymerase III subunits gamma and tau domain III BMQ_0025 PF02575 YbaB/EbfC DNA-binding family BMQ_0026 PF13662 Toprim domain BMQ_0026 PF02132 RecR protein BMQ_0027 PF10704 Protein of unknown function (DUF2508) BMQ_0028 PF07441 SigmaK-factor processing regulatory protein BofA BMQ_0047 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BMQ_0047 PF01276 Orn/Lys/Arg decarboxylase, major domain BMQ_0048 PF02223 Thymidylate kinase BMQ_0049 PF06153 Cyclic-di-AMP receptor BMQ_0050 PF09115 DNA polymerase III, delta subunit, C terminal BMQ_0051 PF04468 PSP1 C-terminal conserved region BMQ_0052 PF06156 Initiation control protein YabA BMQ_0053 PF05175 Methyltransferase small domain BMQ_0054 PF01541 GIY-YIG catalytic domain BMQ_0055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BMQ_0056 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BMQ_0056 PF18277 AbrB C-terminal domain BMQ_0057 PF01588 Putative tRNA binding domain BMQ_0057 PF09334 tRNA synthetases class I (M) BMQ_0057 PF08264 Anticodon-binding domain of tRNA BMQ_0058 PF01026 TatD related DNase BMQ_0059 PF13331 Domain of unknown function (DUF4093) BMQ_0059 PF13662 Toprim domain BMQ_0060 PF00398 Ribosomal RNA adenine dimethylase BMQ_0061 PF05582 YabG peptidase U57 BMQ_0063 PF06257 Biofilm formation stimulator VEG BMQ_0064 PF00269 Small, acid-soluble spore proteins, alpha/beta type BMQ_0065 PF08544 GHMP kinases C terminal BMQ_0065 PF00288 GHMP kinases N terminal domain BMQ_0066 PF09182 Bacterial purine repressor, N-terminal BMQ_0066 PF00156 Phosphoribosyl transferase domain BMQ_0067 PF01042 Endoribonuclease L-PSP BMQ_0068 PF04026 SpoVG BMQ_0069 PF00132 Bacterial transferase hexapeptide (six repeats) BMQ_0069 PF00483 Nucleotidyl transferase BMQ_0070 PF14572 Phosphoribosyl synthetase-associated domain BMQ_0070 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BMQ_0071 PF14693 Ribosomal protein TL5, C-terminal domain BMQ_0071 PF01386 Ribosomal L25p family BMQ_0072 PF01195 Peptidyl-tRNA hydrolase BMQ_0073 PF10955 Protein of unknown function (DUF2757) BMQ_0074 PF17757 UvrB interaction domain BMQ_0074 PF00271 Helicase conserved C-terminal domain BMQ_0074 PF00270 DEAD/DEAH box helicase BMQ_0074 PF03461 TRCF domain BMQ_0074 PF02559 CarD-like/TRCF domain BMQ_0076 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BMQ_0076 PF15714 Stage V sporulation protein T C-terminal, transcription factor BMQ_0077 PF01943 Polysaccharide biosynthesis protein BMQ_0077 PF14667 Polysaccharide biosynthesis C-terminal domain BMQ_0078 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BMQ_0078 PF03819 MazG nucleotide pyrophosphohydrolase domain BMQ_0079 PF01479 S4 domain BMQ_0080 PF07873 YabP family BMQ_0081 PF09578 Spore cortex protein YabQ (Spore_YabQ) BMQ_0082 PF04977 Septum formation initiator BMQ_0083 PF00575 S1 RNA binding domain BMQ_0086 PF07228 Stage II sporulation protein E (SpoIIE) BMQ_0087 PF00092 von Willebrand factor type A domain BMQ_0088 PF00069 Protein kinase domain BMQ_0089 PF11734 TilS substrate C-terminal domain BMQ_0089 PF09179 TilS substrate binding domain BMQ_0089 PF01171 PP-loop family BMQ_0091 PF17862 AAA+ lid domain BMQ_0091 PF06480 FtsH Extracellular BMQ_0091 PF01434 Peptidase family M41 BMQ_0091 PF00004 ATPase family associated with various cellular activities (AAA) BMQ_0092 PF03309 Type III pantothenate kinase BMQ_0093 PF01430 Hsp33 protein BMQ_0094 PF00291 Pyridoxal-phosphate dependent enzyme BMQ_0095 PF00425 chorismate binding enzyme BMQ_0095 PF04715 Anthranilate synthase component I, N terminal region BMQ_0096 PF00117 Glutamine amidotransferase class-I BMQ_0097 PF01063 Amino-transferase class IV BMQ_0098 PF02152 Dihydroneopterin aldolase BMQ_0099 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BMQ_0100 PF00152 tRNA synthetases class II (D, K and N) BMQ_0100 PF01336 OB-fold nucleic acid binding domain BMQ_0104 PF05848 CtsR N-terminal HTH domain BMQ_0104 PF17727 CtsR C-terminal dimerization domain BMQ_0105 PF02151 UvrB/uvrC motif BMQ_0106 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BMQ_0107 PF07724 AAA domain (Cdc48 subfamily) BMQ_0107 PF02861 Clp amino terminal domain, pathogenicity island component BMQ_0107 PF17871 AAA lid domain BMQ_0107 PF00004 ATPase family associated with various cellular activities (AAA) BMQ_0107 PF10431 C-terminal, D2-small domain, of ClpB protein BMQ_0108 PF18073 Rubredoxin metal binding domain BMQ_0109 PF10635 DisA bacterial checkpoint controller linker region BMQ_0109 PF02457 DisA bacterial checkpoint controller nucleotide-binding BMQ_0111 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BMQ_0112 PF02542 YgbB family BMQ_0113 PF00749 tRNA synthetases class I (E and Q), catalytic domain BMQ_0114 PF06426 Serine acetyltransferase, N-terminal BMQ_0114 PF00132 Bacterial transferase hexapeptide (six repeats) BMQ_0115 PF09190 DALR domain BMQ_0115 PF01406 tRNA synthetases class I (C) catalytic domain BMQ_0116 PF00636 Ribonuclease III domain BMQ_0117 PF08032 RNA 2'-O ribose methyltransferase substrate binding BMQ_0117 PF00588 SpoU rRNA Methylase family BMQ_0118 PF05991 YacP-like NYN domain BMQ_0119 PF08281 Sigma-70, region 4 BMQ_0119 PF04542 Sigma-70 region 2 BMQ_0120 PF00471 Ribosomal protein L33 BMQ_0121 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BMQ_0122 PF00467 KOW motif BMQ_0122 PF02357 Transcription termination factor nusG BMQ_0123 PF00298 Ribosomal protein L11, RNA binding domain BMQ_0123 PF03946 Ribosomal protein L11, N-terminal domain BMQ_0124 PF00687 Ribosomal protein L1p/L10e family BMQ_0125 PF00466 Ribosomal protein L10 BMQ_0127 PF05175 Methyltransferase small domain BMQ_0128 PF04561 RNA polymerase Rpb2, domain 2 BMQ_0128 PF04565 RNA polymerase Rpb2, domain 3 BMQ_0128 PF00562 RNA polymerase Rpb2, domain 6 BMQ_0128 PF10385 RNA polymerase beta subunit external 1 domain BMQ_0128 PF04563 RNA polymerase beta subunit BMQ_0128 PF04560 RNA polymerase Rpb2, domain 7 BMQ_0129 PF04997 RNA polymerase Rpb1, domain 1 BMQ_0129 PF04998 RNA polymerase Rpb1, domain 5 BMQ_0129 PF05000 RNA polymerase Rpb1, domain 4 BMQ_0129 PF04983 RNA polymerase Rpb1, domain 3 BMQ_0129 PF00623 RNA polymerase Rpb1, domain 2 BMQ_0130 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BMQ_0131 PF00164 Ribosomal protein S12/S23 BMQ_0132 PF00177 Ribosomal protein S7p/S5e BMQ_0133 PF00679 Elongation factor G C-terminus BMQ_0133 PF14492 Elongation Factor G, domain II BMQ_0133 PF00009 Elongation factor Tu GTP binding domain BMQ_0133 PF03144 Elongation factor Tu domain 2 BMQ_0133 PF03764 Elongation factor G, domain IV BMQ_0134 PF03144 Elongation factor Tu domain 2 BMQ_0134 PF00009 Elongation factor Tu GTP binding domain BMQ_0134 PF03143 Elongation factor Tu C-terminal domain BMQ_0135 PF00338 Ribosomal protein S10p/S20e BMQ_0136 PF00297 Ribosomal protein L3 BMQ_0137 PF00338 Ribosomal protein S10p/S20e BMQ_0138 PF00297 Ribosomal protein L3 BMQ_0139 PF00573 Ribosomal protein L4/L1 family BMQ_0140 PF00276 Ribosomal protein L23 BMQ_0141 PF00181 Ribosomal Proteins L2, RNA binding domain BMQ_0141 PF03947 Ribosomal Proteins L2, C-terminal domain BMQ_0142 PF00203 Ribosomal protein S19 BMQ_0143 PF00237 Ribosomal protein L22p/L17e BMQ_0144 PF00189 Ribosomal protein S3, C-terminal domain BMQ_0144 PF07650 KH domain BMQ_0145 PF00252 Ribosomal protein L16p/L10e BMQ_0146 PF00831 Ribosomal L29 protein BMQ_0147 PF00366 Ribosomal protein S17 BMQ_0148 PF00238 Ribosomal protein L14p/L23e BMQ_0149 PF00467 KOW motif BMQ_0149 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BMQ_0150 PF00281 Ribosomal protein L5 BMQ_0150 PF00673 ribosomal L5P family C-terminus BMQ_0151 PF00253 Ribosomal protein S14p/S29e BMQ_0152 PF00410 Ribosomal protein S8 BMQ_0153 PF00347 Ribosomal protein L6 BMQ_0154 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BMQ_0155 PF03719 Ribosomal protein S5, C-terminal domain BMQ_0155 PF00333 Ribosomal protein S5, N-terminal domain BMQ_0156 PF00327 Ribosomal protein L30p/L7e BMQ_0157 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BMQ_0158 PF00344 SecY translocase BMQ_0159 PF05191 Adenylate kinase, active site lid BMQ_0160 PF00557 Metallopeptidase family M24 BMQ_0161 PF01176 Translation initiation factor 1A / IF-1 BMQ_0162 PF00416 Ribosomal protein S13/S18 BMQ_0163 PF00411 Ribosomal protein S11 BMQ_0164 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BMQ_0164 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BMQ_0164 PF01000 RNA polymerase Rpb3/RpoA insert domain BMQ_0165 PF01196 Ribosomal protein L17 BMQ_0166 PF00005 ABC transporter BMQ_0167 PF00005 ABC transporter BMQ_0168 PF02361 Cobalt transport protein BMQ_0169 PF01416 tRNA pseudouridine synthase BMQ_0170 PF00572 Ribosomal protein L13 BMQ_0171 PF00380 Ribosomal protein S9/S16 BMQ_0173 PF01520 N-acetylmuramoyl-L-alanine amidase BMQ_0174 PF10609 NUBPL iron-transfer P-loop NTPase BMQ_0175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_0175 PF03466 LysR substrate binding domain BMQ_0176 PF17898 Spore germination GerD central core domain BMQ_0177 PF14089 KinB-signalling pathway activation in sporulation BMQ_0178 PF01522 Polysaccharide deacetylase BMQ_0191 PF00491 Arginase family BMQ_0193 PF04542 Sigma-70 region 2 BMQ_0193 PF08281 Sigma-70, region 4 BMQ_0194 PF13490 Putative zinc-finger BMQ_0195 PF02457 DisA bacterial checkpoint controller nucleotide-binding BMQ_0197 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BMQ_0197 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BMQ_0197 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BMQ_0197 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BMQ_0198 PF01380 SIS domain BMQ_0200 PF01709 Transcriptional regulator BMQ_0201 PF00877 NlpC/P60 family BMQ_0201 PF08239 Bacterial SH3 domain BMQ_0201 PF01476 LysM domain BMQ_0202 PF02378 Phosphotransferase system, EIIC BMQ_0202 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BMQ_0202 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BMQ_0203 PF08279 HTH domain BMQ_0203 PF05043 Mga helix-turn-helix domain BMQ_0203 PF00874 PRD domain BMQ_0203 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BMQ_0203 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BMQ_0204 PF01232 Mannitol dehydrogenase Rossmann domain BMQ_0204 PF08125 Mannitol dehydrogenase C-terminal domain BMQ_0206 PF03734 L,D-transpeptidase catalytic domain BMQ_0207 PF01741 Large-conductance mechanosensitive channel, MscL BMQ_0208 PF00884 Sulfatase BMQ_0210 PF00005 ABC transporter BMQ_0210 PF08402 TOBE domain BMQ_0211 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_0212 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_0213 PF13416 Bacterial extracellular solute-binding protein BMQ_0215 PF00486 Transcriptional regulatory protein, C terminal BMQ_0215 PF00072 Response regulator receiver domain BMQ_0216 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_0216 PF00512 His Kinase A (phospho-acceptor) domain BMQ_0218 PF02424 ApbE family BMQ_0219 PF01820 D-ala D-ala ligase N-terminus BMQ_0219 PF07478 D-ala D-ala ligase C-terminus BMQ_0220 PF02875 Mur ligase family, glutamate ligase domain BMQ_0220 PF01225 Mur ligase family, catalytic domain BMQ_0220 PF08245 Mur ligase middle domain BMQ_0221 PF00271 Helicase conserved C-terminal domain BMQ_0221 PF00270 DEAD/DEAH box helicase BMQ_0222 PF03851 UV-endonuclease UvdE BMQ_0223 PF01694 Rhomboid family BMQ_0224 PF01648 4'-phosphopantetheinyl transferase superfamily BMQ_0226 PF01168 Alanine racemase, N-terminal domain BMQ_0226 PF00842 Alanine racemase, C-terminal domain BMQ_0227 PF01402 Ribbon-helix-helix protein, copG family BMQ_0228 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BMQ_0229 PF08678 Rsbr N terminal BMQ_0229 PF01740 STAS domain BMQ_0230 PF01740 STAS domain BMQ_0231 PF13581 Histidine kinase-like ATPase domain BMQ_0232 PF07228 Stage II sporulation protein E (SpoIIE) BMQ_0232 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain BMQ_0233 PF01740 STAS domain BMQ_0234 PF13581 Histidine kinase-like ATPase domain BMQ_0235 PF04542 Sigma-70 region 2 BMQ_0235 PF04539 Sigma-70 region 3 BMQ_0235 PF04545 Sigma-70, region 4 BMQ_0236 PF07228 Stage II sporulation protein E (SpoIIE) BMQ_0237 PF17674 HHH domain BMQ_0237 PF16921 Tex protein YqgF-like domain BMQ_0237 PF00575 S1 RNA binding domain BMQ_0237 PF09371 Tex-like protein N-terminal domain BMQ_0239 PF10263 SprT-like family BMQ_0239 PF17283 SprT-like zinc ribbon domain BMQ_0256 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BMQ_0257 PF00814 Glycoprotease family BMQ_0258 PF00583 Acetyltransferase (GNAT) family BMQ_0259 PF00814 Glycoprotease family BMQ_0260 PF12848 ABC transporter BMQ_0260 PF16326 ABC transporter C-terminal domain BMQ_0260 PF00005 ABC transporter BMQ_0261 PF06971 Putative DNA-binding protein N-terminus BMQ_0261 PF02629 CoA binding domain BMQ_0262 PF02416 mttA/Hcf106 family BMQ_0263 PF00902 Sec-independent protein translocase protein (TatC) BMQ_0265 PF02517 CPBP intramembrane metalloprotease BMQ_0266 PF00166 Chaperonin 10 Kd subunit BMQ_0267 PF00118 TCP-1/cpn60 chaperonin family BMQ_0268 PF17863 AAA lid domain BMQ_0268 PF07726 ATPase family associated with various cellular activities (AAA) BMQ_0269 PF01882 Protein of unknown function DUF58 BMQ_0270 PF11992 Domain of unknown function (DUF3488) BMQ_0270 PF13559 Domain of unknown function (DUF4129) BMQ_0270 PF01841 Transglutaminase-like superfamily BMQ_0271 PF02540 NAD synthase BMQ_0271 PF00117 Glutamine amidotransferase class-I BMQ_0271 PF00958 GMP synthase C terminal domain BMQ_0272 PF00860 Permease family BMQ_0276 PF14044 NETI protein BMQ_0277 PF00731 AIR carboxylase BMQ_0278 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BMQ_0278 PF02222 ATP-grasp domain BMQ_0279 PF10397 Adenylosuccinate lyase C-terminus BMQ_0279 PF00206 Lyase BMQ_0280 PF01259 SAICAR synthetase BMQ_0281 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BMQ_0283 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BMQ_0283 PF02769 AIR synthase related protein, C-terminal domain BMQ_0283 PF00586 AIR synthase related protein, N-terminal domain BMQ_0284 PF00156 Phosphoribosyl transferase domain BMQ_0285 PF00586 AIR synthase related protein, N-terminal domain BMQ_0285 PF02769 AIR synthase related protein, C-terminal domain BMQ_0286 PF00551 Formyl transferase BMQ_0287 PF02142 MGS-like domain BMQ_0287 PF01808 AICARFT/IMPCHase bienzyme BMQ_0288 PF02844 Phosphoribosylglycinamide synthetase, N domain BMQ_0288 PF02843 Phosphoribosylglycinamide synthetase, C domain BMQ_0288 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BMQ_0290 PF13382 Adenine deaminase C-terminal domain BMQ_0290 PF01979 Amidohydrolase family BMQ_0291 PF01371 Trp repressor protein BMQ_0292 PF03129 Anticodon binding domain BMQ_0292 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BMQ_0293 PF01884 PcrB family BMQ_0294 PF13361 UvrD-like helicase C-terminal domain BMQ_0294 PF00580 UvrD/REP helicase N-terminal domain BMQ_0295 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BMQ_0295 PF03120 NAD-dependent DNA ligase OB-fold domain BMQ_0295 PF12826 Helix-hairpin-helix motif BMQ_0295 PF01653 NAD-dependent DNA ligase adenylation domain BMQ_0295 PF00533 BRCA1 C Terminus (BRCT) domain BMQ_0296 PF07537 CamS sex pheromone cAM373 precursor BMQ_0298 PF02686 Glu-tRNAGln amidotransferase C subunit BMQ_0299 PF01425 Amidase BMQ_0300 PF02637 GatB domain BMQ_0300 PF02934 GatB/GatE catalytic domain BMQ_0301 PF00781 Diacylglycerol kinase catalytic domain BMQ_0302 PF01938 TRAM domain BMQ_0302 PF05958 tRNA (Uracil-5-)-methyltransferase BMQ_0302 PF13847 Methyltransferase domain BMQ_0303 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BMQ_0303 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BMQ_0305 PF12728 Helix-turn-helix domain BMQ_0306 PF02608 ABC transporter substrate-binding protein PnrA-like BMQ_0307 PF00989 PAS fold BMQ_0307 PF00512 His Kinase A (phospho-acceptor) domain BMQ_0307 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_0308 PF00557 Metallopeptidase family M24 BMQ_0309 PF10282 Lactonase, 7-bladed beta-propeller BMQ_0310 PF03060 Nitronate monooxygenase BMQ_0311 PF13411 MerR HTH family regulatory protein BMQ_0311 PF06445 GyrI-like small molecule binding domain BMQ_0312 PF07690 Major Facilitator Superfamily BMQ_0314 PF13539 D-alanyl-D-alanine carboxypeptidase BMQ_0315 PF00005 ABC transporter BMQ_0316 PF00497 Bacterial extracellular solute-binding proteins, family 3 BMQ_0317 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_0318 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_0319 PF00324 Amino acid permease BMQ_0320 PF04286 Protein of unknown function (DUF445) BMQ_0321 PF03413 Peptidase propeptide and YPEB domain BMQ_0322 PF03413 Peptidase propeptide and YPEB domain BMQ_0323 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_0323 PF00512 His Kinase A (phospho-acceptor) domain BMQ_0323 PF00672 HAMP domain BMQ_0324 PF00072 Response regulator receiver domain BMQ_0324 PF00486 Transcriptional regulatory protein, C terminal BMQ_0325 PF01569 PAP2 superfamily BMQ_0326 PF02566 OsmC-like protein BMQ_0327 PF03824 High-affinity nickel-transport protein BMQ_0328 PF01546 Peptidase family M20/M25/M40 BMQ_0328 PF07687 Peptidase dimerisation domain BMQ_0329 PF07681 DoxX BMQ_0330 PF01965 DJ-1/PfpI family BMQ_0332 PF12867 DinB superfamily BMQ_0334 PF01235 Sodium:alanine symporter family BMQ_0335 PF06081 Aromatic acid exporter family member 1 BMQ_0337 PF02915 Rubrerythrin BMQ_0338 PF01544 CorA-like Mg2+ transporter protein BMQ_0339 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_0339 PF00989 PAS fold BMQ_0339 PF17203 Single cache domain 3 BMQ_0339 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BMQ_0340 PF00072 Response regulator receiver domain BMQ_0343 PF08447 PAS fold BMQ_0343 PF00512 His Kinase A (phospho-acceptor) domain BMQ_0343 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_0343 PF00989 PAS fold BMQ_0344 PF00271 Helicase conserved C-terminal domain BMQ_0344 PF00270 DEAD/DEAH box helicase BMQ_0346 PF14436 Bacterial EndoU nuclease BMQ_0346 PF04740 LXG domain of WXG superfamily BMQ_0348 PF06013 Proteins of 100 residues with WXG BMQ_0349 PF08817 WXG100 protein secretion system (Wss), protein YukD BMQ_0350 PF10140 WXG100 protein secretion system (Wss), protein YukC BMQ_0351 PF01580 FtsK/SpoIIIE family BMQ_0351 PF12538 DNA transporter BMQ_0353 PF17355 Family of unknown function (DUF5383) BMQ_0355 PF04231 Endonuclease I BMQ_0356 PF00686 Starch binding domain BMQ_0356 PF01373 Glycosyl hydrolase family 14 BMQ_0357 PF01625 Peptide methionine sulfoxide reductase BMQ_0360 PF00005 ABC transporter BMQ_0360 PF12848 ABC transporter BMQ_0361 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BMQ_0362 PF02898 Nitric oxide synthase, oxygenase domain BMQ_0363 PF11121 Protein of unknown function (DUF2639) BMQ_0364 PF02082 Transcriptional regulator BMQ_0365 PF00042 Globin BMQ_0365 PF00970 Oxidoreductase FAD-binding domain BMQ_0365 PF00175 Oxidoreductase NAD-binding domain BMQ_0366 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BMQ_0367 PF01965 DJ-1/PfpI family BMQ_0368 PF00188 Cysteine-rich secretory protein family BMQ_0369 PF01979 Amidohydrolase family BMQ_0369 PF13382 Adenine deaminase C-terminal domain BMQ_0370 PF06569 Protein of unknown function (DUF1128) BMQ_0371 PF01451 Low molecular weight phosphotyrosine protein phosphatase BMQ_0373 PF03631 Virulence factor BrkB BMQ_0376 PF01022 Bacterial regulatory protein, arsR family BMQ_0377 PF16916 Dimerisation domain of Zinc Transporter BMQ_0377 PF01545 Cation efflux family BMQ_0378 PF07690 Major Facilitator Superfamily BMQ_0379 PF05870 Phenolic acid decarboxylase (PAD) BMQ_0381 PF16242 Pyridoxamine 5'-phosphate oxidase like BMQ_0382 PF01699 Sodium/calcium exchanger protein BMQ_0383 PF14167 YfkD-like protein BMQ_0384 PF04055 Radical SAM superfamily BMQ_0384 PF08756 YfkB-like domain BMQ_0386 PF05683 Fumarase C-terminus BMQ_0386 PF05681 Fumarate hydratase (Fumerase) BMQ_0387 PF01522 Polysaccharide deacetylase BMQ_0388 PF05958 tRNA (Uracil-5-)-methyltransferase BMQ_0388 PF01938 TRAM domain BMQ_0390 PF00324 Amino acid permease BMQ_0391 PF13426 PAS domain BMQ_0391 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_0391 PF00512 His Kinase A (phospho-acceptor) domain BMQ_0391 PF00989 PAS fold BMQ_0391 PF13188 PAS domain BMQ_0394 PF01979 Amidohydrolase family BMQ_0395 PF08338 Domain of unknown function (DUF1731) BMQ_0395 PF01370 NAD dependent epimerase/dehydratase family BMQ_0396 PF02631 RecX family BMQ_0397 PF00106 short chain dehydrogenase BMQ_0398 PF08838 Protein of unknown function (DUF1811) BMQ_0399 PF08176 Small acid-soluble spore protein K family BMQ_0401 PF04307 LexA-binding, inner membrane-associated putative hydrolase BMQ_0402 PF00730 HhH-GPD superfamily base excision DNA repair protein BMQ_0402 PF14815 NUDIX domain BMQ_0405 PF04259 Small, acid-soluble spore protein, gamma-type BMQ_0406 PF14182 YgaB-like protein BMQ_0407 PF04167 Protein of unknown function (DUF402) BMQ_0408 PF00664 ABC transporter transmembrane region BMQ_0408 PF00005 ABC transporter BMQ_0409 PF06081 Aromatic acid exporter family member 1 BMQ_0410 PF00202 Aminotransferase class-III BMQ_0411 PF00005 ABC transporter BMQ_0414 PF07885 Ion channel BMQ_0415 PF00578 AhpC/TSA family BMQ_0416 PF01475 Ferric uptake regulator family BMQ_0417 PF11023 Zinc-ribbon containing domain BMQ_0418 PF18576 Helix-turn-helix domain BMQ_0418 PF14540 Nucleotidyltransferase-like BMQ_0440 PF08331 Domain of unknown function (DUF1730) BMQ_0441 PF12671 Putative amidase domain BMQ_0442 PF00588 SpoU rRNA Methylase family BMQ_0443 PF06798 PrkA serine protein kinase C-terminal domain BMQ_0443 PF08298 PrkA AAA domain BMQ_0444 PF04285 Protein of unknown function (DUF444) BMQ_0446 PF01545 Cation efflux family BMQ_0446 PF16916 Dimerisation domain of Zinc Transporter BMQ_0448 PF13667 ThiC-associated domain BMQ_0448 PF01964 Radical SAM ThiC family BMQ_0450 PF02673 Bacitracin resistance protein BacA BMQ_0451 PF00375 Sodium:dicarboxylate symporter family BMQ_0453 PF09335 SNARE associated Golgi protein BMQ_0454 PF12787 EcsC protein family BMQ_0455 PF00324 Amino acid permease BMQ_0457 PF16874 Glycosyl hydrolase family 36 C-terminal domain BMQ_0457 PF16875 Glycosyl hydrolase family 36 N-terminal domain BMQ_0459 PF04309 Glycerol-3-phosphate responsive antiterminator BMQ_0461 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_0462 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_0463 PF13416 Bacterial extracellular solute-binding protein BMQ_0464 PF03009 Glycerophosphoryl diester phosphodiesterase family BMQ_0467 PF13378 Enolase C-terminal domain-like BMQ_0467 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BMQ_0468 PF00877 NlpC/P60 family BMQ_0468 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain BMQ_0475 PF10503 Esterase PHB depolymerase BMQ_0476 PF06725 3D domain BMQ_0476 PF01476 LysM domain BMQ_0477 PF02557 D-alanyl-D-alanine carboxypeptidase BMQ_0479 PF08239 Bacterial SH3 domain BMQ_0481 PF00583 Acetyltransferase (GNAT) family BMQ_0482 PF13091 PLD-like domain BMQ_0482 PF13396 Phospholipase_D-nuclease N-terminal BMQ_0485 PF00269 Small, acid-soluble spore proteins, alpha/beta type BMQ_0486 PF00356 Bacterial regulatory proteins, lacI family BMQ_0487 PF07690 Major Facilitator Superfamily BMQ_0488 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BMQ_0488 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMQ_0489 PF00294 pfkB family carbohydrate kinase BMQ_0490 PF00171 Aldehyde dehydrogenase family BMQ_0491 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BMQ_0491 PF00205 Thiamine pyrophosphate enzyme, central domain BMQ_0491 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BMQ_0492 PF01261 Xylose isomerase-like TIM barrel BMQ_0493 PF00356 Bacterial regulatory proteins, lacI family BMQ_0494 PF04962 KduI/IolB family BMQ_0497 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BMQ_0497 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BMQ_0498 PF01037 Lrp/AsnC ligand binding domain BMQ_0502 PF07690 Major Facilitator Superfamily BMQ_0503 PF00440 Bacterial regulatory proteins, tetR family BMQ_0504 PF00849 RNA pseudouridylate synthase BMQ_0504 PF01479 S4 domain BMQ_0507 PF14552 Tautomerase enzyme BMQ_0508 PF00091 Tubulin/FtsZ family, GTPase domain BMQ_0508 PF12327 FtsZ family, C-terminal domain BMQ_0509 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BMQ_0511 PF10787 Uncharacterised protein from bacillus cereus group BMQ_0513 PF01026 TatD related DNase BMQ_0516 PF01594 AI-2E family transporter BMQ_0519 PF08240 Alcohol dehydrogenase GroES-like domain BMQ_0519 PF00107 Zinc-binding dehydrogenase BMQ_0520 PF02652 L-lactate permease BMQ_0521 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BMQ_0521 PF00056 lactate/malate dehydrogenase, NAD binding domain BMQ_0522 PF16916 Dimerisation domain of Zinc Transporter BMQ_0522 PF01545 Cation efflux family BMQ_0523 PF00672 HAMP domain BMQ_0523 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BMQ_0523 PF02743 Cache domain BMQ_0524 PF01479 S4 domain BMQ_0524 PF00849 RNA pseudouridylate synthase BMQ_0527 PF17969 L,D-transpeptidase C-terminal domain BMQ_0527 PF03734 L,D-transpeptidase catalytic domain BMQ_0528 PF00583 Acetyltransferase (GNAT) family BMQ_0528 PF00795 Carbon-nitrogen hydrolase BMQ_0529 PF04309 Glycerol-3-phosphate responsive antiterminator BMQ_0530 PF00230 Major intrinsic protein BMQ_0531 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BMQ_0531 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BMQ_0532 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BMQ_0532 PF01266 FAD dependent oxidoreductase BMQ_0533 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BMQ_0533 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BMQ_0533 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BMQ_0533 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BMQ_0534 PF02632 BioY family BMQ_0535 PF14148 YhdB-like protein BMQ_0537 PF04293 SpoVR like protein BMQ_0539 PF02082 Transcriptional regulator BMQ_0540 PF00107 Zinc-binding dehydrogenase BMQ_0540 PF08240 Alcohol dehydrogenase GroES-like domain BMQ_0542 PF00005 ABC transporter BMQ_0543 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_0544 PF00497 Bacterial extracellular solute-binding proteins, family 3 BMQ_0545 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BMQ_0546 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BMQ_0548 PF02581 Thiamine monophosphate synthase BMQ_0549 PF01266 FAD dependent oxidoreductase BMQ_0551 PF05690 Thiazole biosynthesis protein ThiG BMQ_0552 PF00899 ThiF family BMQ_0553 PF08543 Phosphomethylpyrimidine kinase BMQ_0554 PF00300 Histidine phosphatase superfamily (branch 1) BMQ_0556 PF13460 NAD(P)H-binding BMQ_0557 PF01595 Cyclin M transmembrane N-terminal domain BMQ_0557 PF03471 Transporter associated domain BMQ_0557 PF00571 CBS domain BMQ_0558 PF00269 Small, acid-soluble spore proteins, alpha/beta type BMQ_0560 PF17912 MalK OB fold domain BMQ_0560 PF03459 TOBE domain BMQ_0560 PF00005 ABC transporter BMQ_0561 PF13556 PucR C-terminal helix-turn-helix domain BMQ_0564 PF14398 YheC/D like ATP-grasp BMQ_0565 PF14398 YheC/D like ATP-grasp BMQ_0567 PF06133 Control of competence regulator ComK, YlbF/YmcA BMQ_0570 PF04055 Radical SAM superfamily BMQ_0571 PF13193 AMP-binding enzyme C-terminal domain BMQ_0571 PF00501 AMP-binding enzyme BMQ_0572 PF00378 Enoyl-CoA hydratase/isomerase BMQ_0573 PF00216 Bacterial DNA-binding protein BMQ_0575 PF13732 Domain of unknown function (DUF4162) BMQ_0575 PF00005 ABC transporter BMQ_0577 PF01966 HD domain BMQ_0577 PF01336 OB-fold nucleic acid binding domain BMQ_0578 PF14147 Sporulation protein YhaL BMQ_0579 PF05698 Bacterial trigger factor protein (TF) C-terminus BMQ_0584 PF17099 Tryptophan transporter TrpP BMQ_0585 PF00266 Aminotransferase class-V BMQ_0586 PF03551 Transcriptional regulator PadR-like family BMQ_0586 PF10400 Virulence activator alpha C-term BMQ_0587 PF13673 Acetyltransferase (GNAT) domain BMQ_0588 PF01757 Acyltransferase family BMQ_0589 PF01230 HIT domain BMQ_0590 PF00005 ABC transporter BMQ_0591 PF05975 Bacterial ABC transporter protein EcsB BMQ_0592 PF12787 EcsC protein family BMQ_0593 PF01546 Peptidase family M20/M25/M40 BMQ_0593 PF07687 Peptidase dimerisation domain BMQ_0594 PF01569 PAP2 superfamily BMQ_0596 PF03992 Antibiotic biosynthesis monooxygenase BMQ_0597 PF00905 Penicillin binding protein transpeptidase domain BMQ_0597 PF00912 Transglycosylase BMQ_0598 PF01208 Uroporphyrinogen decarboxylase (URO-D) BMQ_0601 PF17932 Tetracyclin repressor-like, C-terminal domain BMQ_0601 PF00440 Bacterial regulatory proteins, tetR family BMQ_0603 PF01547 Bacterial extracellular solute-binding protein BMQ_0604 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_0604 PF06580 Histidine kinase BMQ_0604 PF00672 HAMP domain BMQ_0604 PF02743 Cache domain BMQ_0605 PF00072 Response regulator receiver domain BMQ_0605 PF04397 LytTr DNA-binding domain BMQ_0607 PF12706 Beta-lactamase superfamily domain BMQ_0608 PF10437 Bacterial lipoate protein ligase C-terminus BMQ_0608 PF03099 Biotin/lipoate A/B protein ligase family BMQ_0609 PF13193 AMP-binding enzyme C-terminal domain BMQ_0609 PF00501 AMP-binding enzyme BMQ_0610 PF00378 Enoyl-CoA hydratase/isomerase BMQ_0633 PF16491 CAAX prenyl protease N-terminal, five membrane helices BMQ_0633 PF01435 Peptidase family M48 BMQ_0634 PF00463 Isocitrate lyase family BMQ_0635 PF08858 IDEAL domain BMQ_0636 PF00326 Prolyl oligopeptidase family BMQ_0636 PF07676 WD40-like Beta Propeller Repeat BMQ_0637 PF09335 SNARE associated Golgi protein BMQ_0639 PF12705 PD-(D/E)XK nuclease superfamily BMQ_0640 PF12705 PD-(D/E)XK nuclease superfamily BMQ_0640 PF13361 UvrD-like helicase C-terminal domain BMQ_0640 PF00580 UvrD/REP helicase N-terminal domain BMQ_0641 PF00149 Calcineurin-like phosphoesterase BMQ_0641 PF12320 Type 5 capsule protein repressor C-terminal domain BMQ_0642 PF13476 AAA domain BMQ_0644 PF10676 Spore germination protein gerPA/gerPF BMQ_0647 PF10737 Spore germination protein GerPC BMQ_0648 PF10803 Spore germination GerPB BMQ_0649 PF10676 Spore germination protein gerPA/gerPF BMQ_0650 PF04235 Protein of unknown function (DUF418) BMQ_0651 PF07457 Protein of unknown function (DUF1516) BMQ_0653 PF00733 Asparagine synthase BMQ_0653 PF13537 Glutamine amidotransferase domain BMQ_0654 PF01593 Flavin containing amine oxidoreductase BMQ_0657 PF00543 Nitrogen regulatory protein P-II BMQ_0658 PF00909 Ammonium Transporter Family BMQ_0659 PF01373 Glycosyl hydrolase family 14 BMQ_0659 PF03423 Carbohydrate binding domain (family 25) BMQ_0659 PF00128 Alpha amylase, catalytic domain BMQ_0660 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BMQ_0660 PF00356 Bacterial regulatory proteins, lacI family BMQ_0661 PF00171 Aldehyde dehydrogenase family BMQ_0662 PF00202 Aminotransferase class-III BMQ_0663 PF01546 Peptidase family M20/M25/M40 BMQ_0664 PF00324 Amino acid permease BMQ_0665 PF13426 PAS domain BMQ_0665 PF02954 Bacterial regulatory protein, Fis family BMQ_0665 PF00158 Sigma-54 interaction domain BMQ_0667 PF04461 Protein of unknown function (DUF520) BMQ_0668 PF13509 S1 domain BMQ_0668 PF17783 CvfB-like winged helix domain BMQ_0670 PF02645 Uncharacterised protein, DegV family COG1307 BMQ_0671 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BMQ_0671 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BMQ_0675 PF01883 Iron-sulfur cluster assembly protein BMQ_0676 PF00325 Bacterial regulatory proteins, crp family BMQ_0676 PF00027 Cyclic nucleotide-binding domain BMQ_0677 PF01118 Semialdehyde dehydrogenase, NAD binding domain BMQ_0677 PF02774 Semialdehyde dehydrogenase, dimerisation domain BMQ_0678 PF01960 ArgJ family BMQ_0679 PF00696 Amino acid kinase family BMQ_0680 PF00202 Aminotransferase class-III BMQ_0681 PF00117 Glutamine amidotransferase class-I BMQ_0681 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BMQ_0682 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BMQ_0682 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BMQ_0683 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BMQ_0683 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BMQ_0685 PF14168 YjzC-like protein BMQ_0686 PF02861 Clp amino terminal domain, pathogenicity island component BMQ_0686 PF17871 AAA lid domain BMQ_0686 PF07724 AAA domain (Cdc48 subfamily) BMQ_0686 PF00004 ATPase family associated with various cellular activities (AAA) BMQ_0686 PF10431 C-terminal, D2-small domain, of ClpB protein BMQ_0687 PF12833 Helix-turn-helix domain BMQ_0688 PF00288 GHMP kinases N terminal domain BMQ_0688 PF08544 GHMP kinases C terminal BMQ_0688 PF10509 Galactokinase galactose-binding signature BMQ_0689 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BMQ_0689 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BMQ_0690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BMQ_0690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BMQ_0694 PF10815 ComZ BMQ_0695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BMQ_0695 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BMQ_0696 PF02801 Beta-ketoacyl synthase, C-terminal domain BMQ_0696 PF00109 Beta-ketoacyl synthase, N-terminal domain BMQ_0697 PF10026 Predicted Zn-dependent protease (DUF2268) BMQ_0698 PF00005 ABC transporter BMQ_0698 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMQ_0699 PF00005 ABC transporter BMQ_0699 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMQ_0700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BMQ_0701 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_0702 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_0703 PF12227 Protein of unknown function (DUF3603) BMQ_0704 PF00579 tRNA synthetases class I (W and Y) BMQ_0705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BMQ_0706 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_0707 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_0707 PF12911 N-terminal TM domain of oligopeptide transport permease C BMQ_0708 PF00005 ABC transporter BMQ_0708 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMQ_0709 PF00005 ABC transporter BMQ_0709 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMQ_0710 PF13508 Acetyltransferase (GNAT) domain BMQ_0711 PF00324 Amino acid permease BMQ_0712 PF13520 Amino acid permease BMQ_0713 PF03960 ArsC family BMQ_0714 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_0714 PF03466 LysR substrate binding domain BMQ_0717 PF03741 Integral membrane protein TerC family BMQ_0718 PF05389 Negative regulator of genetic competence (MecA) BMQ_0719 PF13091 PLD-like domain BMQ_0719 PF13396 Phospholipase_D-nuclease N-terminal BMQ_0721 PF08439 Oligopeptidase F BMQ_0721 PF01432 Peptidase family M3 BMQ_0724 PF01152 Bacterial-like globin BMQ_0725 PF01464 Transglycosylase SLT domain BMQ_0726 PF01928 CYTH domain BMQ_0728 PF04607 Region found in RelA / SpoT proteins BMQ_0729 PF01513 ATP-NAD kinase BMQ_0730 PF00849 RNA pseudouridylate synthase BMQ_0731 PF00149 Calcineurin-like phosphoesterase BMQ_0732 PF00571 CBS domain BMQ_0732 PF01769 Divalent cation transporter BMQ_0732 PF03448 MgtE intracellular N domain BMQ_0733 PF02254 TrkA-N domain BMQ_0733 PF02080 TrkA-C domain BMQ_0733 PF00999 Sodium/hydrogen exchanger family BMQ_0735 PF07098 Protein of unknown function (DUF1360) BMQ_0740 PF14069 Stage VI sporulation protein F BMQ_0742 PF00580 UvrD/REP helicase N-terminal domain BMQ_0742 PF13361 UvrD-like helicase C-terminal domain BMQ_0744 PF04239 Protein of unknown function (DUF421) BMQ_0745 PF13673 Acetyltransferase (GNAT) domain BMQ_0747 PF00756 Putative esterase BMQ_0749 PF04608 Phosphatidylglycerophosphatase A BMQ_0751 PF01380 SIS domain BMQ_0751 PF01418 Helix-turn-helix domain, rpiR family BMQ_0752 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BMQ_0752 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BMQ_0753 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BMQ_0753 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BMQ_0754 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BMQ_0755 PF02447 GntP family permease BMQ_0758 PF01037 Lrp/AsnC ligand binding domain BMQ_0759 PF00797 N-acetyltransferase BMQ_0760 PF01323 DSBA-like thioredoxin domain BMQ_0762 PF03880 DbpA RNA binding domain BMQ_0762 PF00271 Helicase conserved C-terminal domain BMQ_0762 PF00270 DEAD/DEAH box helicase BMQ_0763 PF03932 CutC family BMQ_0764 PF00324 Amino acid permease BMQ_0766 PF00753 Metallo-beta-lactamase superfamily BMQ_0767 PF00440 Bacterial regulatory proteins, tetR family BMQ_0767 PF13305 Tetracyclin repressor-like, C-terminal domain BMQ_0768 PF00874 PRD domain BMQ_0768 PF08279 HTH domain BMQ_0768 PF05043 Mga helix-turn-helix domain BMQ_0768 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BMQ_0769 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BMQ_0770 PF02378 Phosphotransferase system, EIIC BMQ_0771 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BMQ_0772 PF02056 Family 4 glycosyl hydrolase BMQ_0772 PF11975 Family 4 glycosyl hydrolase C-terminal domain BMQ_0773 PF06580 Histidine kinase BMQ_0773 PF07694 5TMR of 5TMR-LYT BMQ_0773 PF13492 GAF domain BMQ_0773 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_0774 PF04397 LytTr DNA-binding domain BMQ_0774 PF00072 Response regulator receiver domain BMQ_0775 PF03788 LrgA family BMQ_0776 PF04172 LrgB-like family BMQ_0777 PF18267 Rubredoxin NAD+ reductase C-terminal domain BMQ_0777 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMQ_0777 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BMQ_0777 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BMQ_0777 PF04324 BFD-like [2Fe-2S] binding domain BMQ_0778 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BMQ_0778 PF00384 Molybdopterin oxidoreductase BMQ_0778 PF01568 Molydopterin dinucleotide binding domain BMQ_0779 PF07690 Major Facilitator Superfamily BMQ_0783 PF08245 Mur ligase middle domain BMQ_0783 PF01225 Mur ligase family, catalytic domain BMQ_0783 PF02875 Mur ligase family, glutamate ligase domain BMQ_0785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BMQ_0785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BMQ_0787 PF00293 NUDIX domain BMQ_0787 PF13344 Haloacid dehalogenase-like hydrolase BMQ_0788 PF03306 Alpha-acetolactate decarboxylase BMQ_0789 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BMQ_0789 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BMQ_0789 PF00205 Thiamine pyrophosphate enzyme, central domain BMQ_0790 PF09962 Uncharacterized conserved protein (DUF2196) BMQ_0792 PF01638 HxlR-like helix-turn-helix BMQ_0793 PF07690 Major Facilitator Superfamily BMQ_0794 PF00296 Luciferase-like monooxygenase BMQ_0795 PF00698 Acyl transferase domain BMQ_0796 PF16957 Malonate decarboxylase, alpha subunit, transporter BMQ_0797 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BMQ_0798 PF06857 Malonate decarboxylase delta subunit (MdcD) BMQ_0799 PF01039 Carboxyl transferase domain BMQ_0800 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BMQ_0801 PF08664 YcbB domain BMQ_0801 PF00072 Response regulator receiver domain BMQ_0802 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_0803 PF04960 Glutaminase BMQ_0804 PF01235 Sodium:alanine symporter family BMQ_0805 PF00474 Sodium:solute symporter family BMQ_0808 PF13520 Amino acid permease BMQ_0810 PF03061 Thioesterase superfamily BMQ_0811 PF00311 Phosphoenolpyruvate carboxylase BMQ_0813 PF00355 Rieske [2Fe-2S] domain BMQ_0814 PF03649 Uncharacterised protein family (UPF0014) BMQ_0815 PF00005 ABC transporter BMQ_0816 PF01053 Cys/Met metabolism PLP-dependent enzyme BMQ_0817 PF04893 Yip1 domain BMQ_0818 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BMQ_0819 PF00005 ABC transporter BMQ_0820 PF12704 MacB-like periplasmic core domain BMQ_0820 PF02687 FtsX-like permease family BMQ_0822 PF00809 Pterin binding enzyme BMQ_0823 PF08240 Alcohol dehydrogenase GroES-like domain BMQ_0823 PF13823 Alcohol dehydrogenase GroES-associated BMQ_0823 PF00107 Zinc-binding dehydrogenase BMQ_0826 PF01773 Na+ dependent nucleoside transporter N-terminus BMQ_0826 PF07662 Na+ dependent nucleoside transporter C-terminus BMQ_0827 PF00324 Amino acid permease BMQ_0828 PF02632 BioY family BMQ_0830 PF00202 Aminotransferase class-III BMQ_0831 PF03741 Integral membrane protein TerC family BMQ_0833 PF00375 Sodium:dicarboxylate symporter family BMQ_0834 PF03480 Bacterial extracellular solute-binding protein, family 7 BMQ_0835 PF17203 Single cache domain 3 BMQ_0835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_0835 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BMQ_0836 PF00072 Response regulator receiver domain BMQ_0836 PF04703 FaeA-like protein BMQ_0837 PF06800 Sugar transport protein BMQ_0843 PF01381 Helix-turn-helix BMQ_0844 PF00884 Sulfatase BMQ_0846 PF00392 Bacterial regulatory proteins, gntR family BMQ_0846 PF00155 Aminotransferase class I and II BMQ_0847 PF02574 Homocysteine S-methyltransferase BMQ_0848 PF01557 Fumarylacetoacetate (FAA) hydrolase family BMQ_0850 PF03600 Citrate transporter BMQ_0851 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_0851 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BMQ_0852 PF00072 Response regulator receiver domain BMQ_0852 PF12431 Transcriptional regulator BMQ_0852 PF08279 HTH domain BMQ_0853 PF03401 Tripartite tricarboxylate transporter family receptor BMQ_0855 PF03466 LysR substrate binding domain BMQ_0855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_0856 PF05145 Transition state regulatory protein AbrB BMQ_0857 PF08241 Methyltransferase domain BMQ_0858 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_0859 PF00005 ABC transporter BMQ_0859 PF00571 CBS domain BMQ_0860 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BMQ_0861 PF00440 Bacterial regulatory proteins, tetR family BMQ_0861 PF17934 Tetracyclin repressor-like, C-terminal domain BMQ_0863 PF00202 Aminotransferase class-III BMQ_0864 PF00491 Arginase family BMQ_0865 PF00324 Amino acid permease BMQ_0866 PF13419 Haloacid dehalogenase-like hydrolase BMQ_0867 PF03180 NLPA lipoprotein BMQ_0868 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_0869 PF09383 NIL domain BMQ_0869 PF00005 ABC transporter BMQ_0870 PF00296 Luciferase-like monooxygenase BMQ_0871 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BMQ_0871 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BMQ_0872 PF00296 Luciferase-like monooxygenase BMQ_0873 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BMQ_0873 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BMQ_0874 PF01497 Periplasmic binding protein BMQ_0875 PF01032 FecCD transport family BMQ_0876 PF01032 FecCD transport family BMQ_0878 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BMQ_0878 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BMQ_0878 PF06827 Zinc finger found in FPG and IleRS BMQ_0880 PF01380 SIS domain BMQ_0881 PF01380 SIS domain BMQ_0881 PF01418 Helix-turn-helix domain, rpiR family BMQ_0882 PF00367 phosphotransferase system, EIIB BMQ_0882 PF02378 Phosphotransferase system, EIIC BMQ_0884 PF01546 Peptidase family M20/M25/M40 BMQ_0884 PF07687 Peptidase dimerisation domain BMQ_0885 PF03070 TENA/THI-4/PQQC family BMQ_0886 PF00005 ABC transporter BMQ_0887 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_0888 PF09084 NMT1/THI5 like BMQ_0890 PF01380 SIS domain BMQ_0891 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BMQ_0892 PF01638 HxlR-like helix-turn-helix BMQ_0896 PF17910 FeoB cytosolic helical domain BMQ_0896 PF07670 Nucleoside recognition BMQ_0896 PF07664 Ferrous iron transport protein B C terminus BMQ_0896 PF02421 Ferrous iron transport protein B BMQ_0901 PF04552 Sigma-54, DNA binding domain BMQ_0901 PF00309 Sigma-54 factor, Activator interacting domain (AID) BMQ_0901 PF04963 Sigma-54 factor, core binding domain BMQ_0902 PF01638 HxlR-like helix-turn-helix BMQ_0903 PF00109 Beta-ketoacyl synthase, N-terminal domain BMQ_0903 PF09277 Erythronolide synthase, docking BMQ_0903 PF08990 Erythronolide synthase docking BMQ_0903 PF08240 Alcohol dehydrogenase GroES-like domain BMQ_0903 PF00698 Acyl transferase domain BMQ_0903 PF16197 Ketoacyl-synthetase C-terminal extension BMQ_0903 PF00550 Phosphopantetheine attachment site BMQ_0903 PF14765 Polyketide synthase dehydratase BMQ_0903 PF08659 KR domain BMQ_0903 PF02801 Beta-ketoacyl synthase, C-terminal domain BMQ_0905 PF00664 ABC transporter transmembrane region BMQ_0905 PF00005 ABC transporter BMQ_0906 PF00005 ABC transporter BMQ_0906 PF00664 ABC transporter transmembrane region BMQ_0908 PF00474 Sodium:solute symporter family BMQ_0909 PF04341 Protein of unknown function, DUF485 BMQ_0911 PF09339 IclR helix-turn-helix domain BMQ_0911 PF01614 Bacterial transcriptional regulator BMQ_0912 PF00248 Aldo/keto reductase family BMQ_0913 PF00106 short chain dehydrogenase BMQ_0915 PF01047 MarR family BMQ_0917 PF07690 Major Facilitator Superfamily BMQ_0918 PF03358 NADPH-dependent FMN reductase BMQ_0921 PF00356 Bacterial regulatory proteins, lacI family BMQ_0922 PF00294 pfkB family carbohydrate kinase BMQ_0923 PF05025 RbsD / FucU transport protein family BMQ_0924 PF00005 ABC transporter BMQ_0925 PF02653 Branched-chain amino acid transport system / permease component BMQ_0926 PF13407 Periplasmic binding protein domain BMQ_0927 PF06725 3D domain BMQ_0927 PF07501 G5 domain BMQ_0927 PF03990 G5-linked-Ubiquitin-like domain BMQ_0928 PF01613 Flavin reductase like domain BMQ_0930 PF01547 Bacterial extracellular solute-binding protein BMQ_0931 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_0932 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_0935 PF00072 Response regulator receiver domain BMQ_0935 PF00990 Diguanylate cyclase, GGDEF domain BMQ_0937 PF00535 Glycosyl transferase family 2 BMQ_0939 PF00486 Transcriptional regulatory protein, C terminal BMQ_0939 PF00072 Response regulator receiver domain BMQ_0940 PF00512 His Kinase A (phospho-acceptor) domain BMQ_0940 PF13426 PAS domain BMQ_0940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_0940 PF00672 HAMP domain BMQ_0941 PF09350 Domain of unknown function (DUF1992) BMQ_0943 PF00300 Histidine phosphatase superfamily (branch 1) BMQ_0947 PF01979 Amidohydrolase family BMQ_0948 PF00860 Permease family BMQ_0951 PF01202 Shikimate kinase BMQ_0952 PF00171 Aldehyde dehydrogenase family BMQ_0953 PF00205 Thiamine pyrophosphate enzyme, central domain BMQ_0953 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BMQ_0953 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BMQ_0954 PF01487 Type I 3-dehydroquinase BMQ_0955 PF13113 Protein of unknown function (DUF3970) BMQ_0956 PF00367 phosphotransferase system, EIIB BMQ_0956 PF02378 Phosphotransferase system, EIIC BMQ_0957 PF16657 Maltogenic Amylase, C-terminal domain BMQ_0957 PF00128 Alpha amylase, catalytic domain BMQ_0958 PF00392 Bacterial regulatory proteins, gntR family BMQ_0958 PF07702 UTRA domain BMQ_0959 PF02682 Carboxyltransferase domain, subdomain C and D BMQ_0960 PF02626 Carboxyltransferase domain, subdomain A and B BMQ_0961 PF03746 LamB/YcsF family BMQ_0962 PF01566 Natural resistance-associated macrophage protein BMQ_0963 PF03006 Haemolysin-III related BMQ_0968 PF00881 Nitroreductase family BMQ_0969 PF01594 AI-2E family transporter BMQ_0972 PF00107 Zinc-binding dehydrogenase BMQ_0972 PF08240 Alcohol dehydrogenase GroES-like domain BMQ_0974 PF08501 Shikimate dehydrogenase substrate binding domain BMQ_0974 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BMQ_0975 PF07690 Major Facilitator Superfamily BMQ_0976 PF02515 CoA-transferase family III BMQ_0977 PF00682 HMGL-like BMQ_0978 PF00171 Aldehyde dehydrogenase family BMQ_0980 PF07969 Amidohydrolase family BMQ_0981 PF00313 'Cold-shock' DNA-binding domain BMQ_0982 PF13460 NAD(P)H-binding BMQ_0983 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BMQ_0983 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMQ_0984 PF00578 AhpC/TSA family BMQ_0984 PF10417 C-terminal domain of 1-Cys peroxiredoxin BMQ_0985 PF00578 AhpC/TSA family BMQ_0992 PF00563 EAL domain BMQ_0992 PF01590 GAF domain BMQ_0992 PF00990 Diguanylate cyclase, GGDEF domain BMQ_0992 PF00360 Phytochrome region BMQ_0993 PF02416 mttA/Hcf106 family BMQ_0994 PF00893 Small Multidrug Resistance protein BMQ_0995 PF00893 Small Multidrug Resistance protein BMQ_0998 PF08245 Mur ligase middle domain BMQ_0999 PF14102 Capsule biosynthesis CapC BMQ_1000 PF09587 Bacterial capsule synthesis protein PGA_cap BMQ_1010 PF02638 Glycosyl hydrolase-like 10 BMQ_1011 PF01418 Helix-turn-helix domain, rpiR family BMQ_1011 PF01380 SIS domain BMQ_1013 PF02378 Phosphotransferase system, EIIC BMQ_1015 PF02056 Family 4 glycosyl hydrolase BMQ_1015 PF11975 Family 4 glycosyl hydrolase C-terminal domain BMQ_1016 PF03702 Anhydro-N-acetylmuramic acid kinase BMQ_1017 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BMQ_1019 PF01869 BadF/BadG/BcrA/BcrD ATPase family BMQ_1020 PF13580 SIS domain BMQ_1021 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BMQ_1023 PF03611 PTS system sugar-specific permease component BMQ_1024 PF00795 Carbon-nitrogen hydrolase BMQ_1024 PF02540 NAD synthase BMQ_1026 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BMQ_1029 PF01476 LysM domain BMQ_1029 PF03734 L,D-transpeptidase catalytic domain BMQ_1030 PF13847 Methyltransferase domain BMQ_1031 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_1031 PF03466 LysR substrate binding domain BMQ_1033 PF00248 Aldo/keto reductase family BMQ_1036 PF01425 Amidase BMQ_1038 PF16363 GDP-mannose 4,6 dehydratase BMQ_1047 PF17154 Gammaproteobacterial periplasmic sensor domain BMQ_1047 PF00990 Diguanylate cyclase, GGDEF domain BMQ_1047 PF00672 HAMP domain BMQ_1047 PF00563 EAL domain BMQ_1048 PF00990 Diguanylate cyclase, GGDEF domain BMQ_1048 PF03707 Bacterial signalling protein N terminal repeat BMQ_1048 PF00563 EAL domain BMQ_1049 PF01638 HxlR-like helix-turn-helix BMQ_1050 PF06800 Sugar transport protein BMQ_1052 PF01758 Sodium Bile acid symporter family BMQ_1053 PF11755 Protein of unknown function (DUF3311) BMQ_1054 PF00474 Sodium:solute symporter family BMQ_1056 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_1057 PF00072 Response regulator receiver domain BMQ_1057 PF08664 YcbB domain BMQ_1058 PF00375 Sodium:dicarboxylate symporter family BMQ_1062 PF00877 NlpC/P60 family BMQ_1062 PF01476 LysM domain BMQ_1064 PF08486 Stage II sporulation protein BMQ_1065 PF00248 Aldo/keto reductase family BMQ_1067 PF08858 IDEAL domain BMQ_1067 PF08864 UPF0302 domain BMQ_1068 PF02040 Arsenical pump membrane protein BMQ_1069 PF13378 Enolase C-terminal domain-like BMQ_1069 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BMQ_1072 PF00158 Sigma-54 interaction domain BMQ_1076 PF07690 Major Facilitator Superfamily BMQ_1078 PF00873 AcrB/AcrD/AcrF family BMQ_1080 PF01022 Bacterial regulatory protein, arsR family BMQ_1081 PF07853 Protein of unknown function (DUF1648) BMQ_1081 PF13630 SdpI/YhfL protein family BMQ_1084 PF00990 Diguanylate cyclase, GGDEF domain BMQ_1084 PF00563 EAL domain BMQ_1084 PF03707 Bacterial signalling protein N terminal repeat BMQ_1085 PF01227 GTP cyclohydrolase I BMQ_1086 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMQ_1086 PF13192 Thioredoxin domain BMQ_1088 PF00563 EAL domain BMQ_1088 PF00990 Diguanylate cyclase, GGDEF domain BMQ_1088 PF03707 Bacterial signalling protein N terminal repeat BMQ_1089 PF00324 Amino acid permease BMQ_1091 PF00850 Histone deacetylase domain BMQ_1092 PF00669 Bacterial flagellin N-terminal helical region BMQ_1092 PF00700 Bacterial flagellin C-terminal helical region BMQ_1093 PF00669 Bacterial flagellin N-terminal helical region BMQ_1093 PF00700 Bacterial flagellin C-terminal helical region BMQ_1094 PF01470 Pyroglutamyl peptidase BMQ_1102 PF08671 Anti-repressor SinI BMQ_1102 PF01381 Helix-turn-helix BMQ_1104 PF02706 Chain length determinant protein BMQ_1106 PF02397 Bacterial sugar transferase BMQ_1107 PF01370 NAD dependent epimerase/dehydratase family BMQ_1110 PF00535 Glycosyl transferase family 2 BMQ_1111 PF00534 Glycosyl transferases group 1 BMQ_1111 PF13439 Glycosyltransferase Family 4 BMQ_1113 PF04122 Putative cell wall binding repeat 2 BMQ_1113 PF08486 Stage II sporulation protein BMQ_1116 PF00483 Nucleotidyl transferase BMQ_1117 PF02397 Bacterial sugar transferase BMQ_1118 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BMQ_1118 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BMQ_1118 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BMQ_1119 PF03808 Glycosyl transferase WecB/TagA/CpsF family BMQ_1120 PF13439 Glycosyltransferase Family 4 BMQ_1120 PF00534 Glycosyl transferases group 1 BMQ_1121 PF00132 Bacterial transferase hexapeptide (six repeats) BMQ_1122 PF00534 Glycosyl transferases group 1 BMQ_1122 PF13439 Glycosyltransferase Family 4 BMQ_1124 PF00132 Bacterial transferase hexapeptide (six repeats) BMQ_1126 PF02156 Glycosyl hydrolase family 26 BMQ_1127 PF01050 Mannose-6-phosphate isomerase BMQ_1127 PF00483 Nucleotidyl transferase BMQ_1128 PF01238 Phosphomannose isomerase type I BMQ_1129 PF02706 Chain length determinant protein BMQ_1129 PF13807 G-rich domain on putative tyrosine kinase BMQ_1130 PF13614 AAA domain BMQ_1131 PF00483 Nucleotidyl transferase BMQ_1134 PF00535 Glycosyl transferase family 2 BMQ_1134 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BMQ_1135 PF00535 Glycosyl transferase family 2 BMQ_1135 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 BMQ_1138 PF01061 ABC-2 type transporter BMQ_1139 PF08239 Bacterial SH3 domain BMQ_1139 PF00005 ABC transporter BMQ_1140 PF03816 Cell envelope-related transcriptional attenuator domain BMQ_1144 PF00205 Thiamine pyrophosphate enzyme, central domain BMQ_1144 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BMQ_1144 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BMQ_1145 PF01645 Conserved region in glutamate synthase BMQ_1147 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BMQ_1147 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BMQ_1149 PF02447 GntP family permease BMQ_1153 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMQ_1153 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BMQ_1153 PF04324 BFD-like [2Fe-2S] binding domain BMQ_1153 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BMQ_1153 PF18267 Rubredoxin NAD+ reductase C-terminal domain BMQ_1154 PF00355 Rieske [2Fe-2S] domain BMQ_1155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BMQ_1156 PF01226 Formate/nitrite transporter BMQ_1157 PF00294 pfkB family carbohydrate kinase BMQ_1158 PF06800 Sugar transport protein BMQ_1159 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BMQ_1162 PF01554 MatE BMQ_1164 PF03816 Cell envelope-related transcriptional attenuator domain BMQ_1166 PF01544 CorA-like Mg2+ transporter protein BMQ_1167 PF00082 Subtilase family BMQ_1167 PF17936 Bacterial Ig domain BMQ_1171 PF13580 SIS domain BMQ_1173 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BMQ_1174 PF01979 Amidohydrolase family BMQ_1175 PF02378 Phosphotransferase system, EIIC BMQ_1175 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BMQ_1175 PF00367 phosphotransferase system, EIIB BMQ_1176 PF04474 Protein of unknown function (DUF554) BMQ_1177 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BMQ_1177 PF00205 Thiamine pyrophosphate enzyme, central domain BMQ_1177 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BMQ_1184 PF00005 ABC transporter BMQ_1185 PF01595 Cyclin M transmembrane N-terminal domain BMQ_1185 PF03471 Transporter associated domain BMQ_1185 PF00571 CBS domain BMQ_1186 PF13411 MerR HTH family regulatory protein BMQ_1188 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BMQ_1189 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BMQ_1192 PF10502 Signal peptidase, peptidase S26 BMQ_1202 PF01546 Peptidase family M20/M25/M40 BMQ_1205 PF04229 GrpB protein BMQ_1205 PF13673 Acetyltransferase (GNAT) domain BMQ_1206 PF07690 Major Facilitator Superfamily BMQ_1208 PF00860 Permease family BMQ_1210 PF04397 LytTr DNA-binding domain BMQ_1210 PF00072 Response regulator receiver domain BMQ_1211 PF00005 ABC transporter BMQ_1212 PF12679 ABC-2 family transporter protein BMQ_1214 PF13411 MerR HTH family regulatory protein BMQ_1215 PF01047 MarR family BMQ_1216 PF01625 Peptide methionine sulfoxide reductase BMQ_1216 PF01641 SelR domain BMQ_1217 PF03845 Spore germination protein BMQ_1218 PF05504 Spore germination B3/ GerAC like, C-terminal BMQ_1219 PF03323 Bacillus/Clostridium GerA spore germination protein BMQ_1220 PF00245 Alkaline phosphatase BMQ_1221 PF00072 Response regulator receiver domain BMQ_1221 PF04397 LytTr DNA-binding domain BMQ_1222 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_1222 PF09308 LuxQ, periplasmic BMQ_1222 PF00072 Response regulator receiver domain BMQ_1222 PF00512 His Kinase A (phospho-acceptor) domain BMQ_1223 PF03741 Integral membrane protein TerC family BMQ_1224 PF04542 Sigma-70 region 2 BMQ_1225 PF00269 Small, acid-soluble spore proteins, alpha/beta type BMQ_1231 PF00561 alpha/beta hydrolase fold BMQ_1233 PF02386 Cation transport protein BMQ_1237 PF00392 Bacterial regulatory proteins, gntR family BMQ_1237 PF07729 FCD domain BMQ_1238 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BMQ_1238 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BMQ_1238 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BMQ_1239 PF02540 NAD synthase BMQ_1240 PF02754 Cysteine-rich domain BMQ_1241 PF13183 4Fe-4S dicluster domain BMQ_1241 PF02589 LUD domain BMQ_1241 PF11870 Domain of unknown function (DUF3390) BMQ_1242 PF02589 LUD domain BMQ_1243 PF00512 His Kinase A (phospho-acceptor) domain BMQ_1243 PF13426 PAS domain BMQ_1243 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_1243 PF00989 PAS fold BMQ_1243 PF13188 PAS domain BMQ_1244 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BMQ_1244 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BMQ_1246 PF01008 Initiation factor 2 subunit family BMQ_1247 PF01636 Phosphotransferase enzyme family BMQ_1248 PF00795 Carbon-nitrogen hydrolase BMQ_1249 PF00155 Aminotransferase class I and II BMQ_1250 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BMQ_1250 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BMQ_1252 PF00596 Class II Aldolase and Adducin N-terminal domain BMQ_1253 PF03079 ARD/ARD' family BMQ_1255 PF00005 ABC transporter BMQ_1256 PF02653 Branched-chain amino acid transport system / permease component BMQ_1257 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMQ_1257 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BMQ_1258 PF09388 Spo0E like sporulation regulatory protein BMQ_1259 PF02535 ZIP Zinc transporter BMQ_1261 PF01047 MarR family BMQ_1263 PF08447 PAS fold BMQ_1263 PF00989 PAS fold BMQ_1263 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_1263 PF00512 His Kinase A (phospho-acceptor) domain BMQ_1265 PF00004 ATPase family associated with various cellular activities (AAA) BMQ_1265 PF17871 AAA lid domain BMQ_1265 PF07724 AAA domain (Cdc48 subfamily) BMQ_1265 PF10431 C-terminal, D2-small domain, of ClpB protein BMQ_1269 PF00106 short chain dehydrogenase BMQ_1270 PF03323 Bacillus/Clostridium GerA spore germination protein BMQ_1271 PF05504 Spore germination B3/ GerAC like, C-terminal BMQ_1274 PF06508 Queuosine biosynthesis protein QueC BMQ_1275 PF01242 6-pyruvoyl tetrahydropterin synthase BMQ_1276 PF04055 Radical SAM superfamily BMQ_1277 PF14489 QueF-like protein BMQ_1278 PF13460 NAD(P)H-binding BMQ_1280 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BMQ_1281 PF00027 Cyclic nucleotide-binding domain BMQ_1281 PF01734 Patatin-like phospholipase BMQ_1284 PF07486 Cell Wall Hydrolase BMQ_1288 PF00860 Permease family BMQ_1293 PF02574 Homocysteine S-methyltransferase BMQ_1293 PF00809 Pterin binding enzyme BMQ_1293 PF02965 Vitamin B12 dependent methionine synthase, activation domain BMQ_1293 PF02607 B12 binding domain BMQ_1293 PF02310 B12 binding domain BMQ_1294 PF02219 Methylenetetrahydrofolate reductase BMQ_1294 PF02574 Homocysteine S-methyltransferase BMQ_1297 PF00677 Lumazine binding domain BMQ_1298 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BMQ_1298 PF00925 GTP cyclohydrolase II BMQ_1299 PF00885 6,7-dimethyl-8-ribityllumazine synthase BMQ_1301 PF03123 CAT RNA binding domain BMQ_1301 PF00874 PRD domain BMQ_1302 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BMQ_1302 PF02378 Phosphotransferase system, EIIC BMQ_1302 PF00367 phosphotransferase system, EIIB BMQ_1303 PF00381 PTS HPr component phosphorylation site BMQ_1304 PF02896 PEP-utilising enzyme, TIM barrel domain BMQ_1304 PF00391 PEP-utilising enzyme, mobile domain BMQ_1304 PF05524 PEP-utilising enzyme, N-terminal BMQ_1305 PF04172 LrgB-like family BMQ_1306 PF03788 LrgA family BMQ_1307 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_1307 PF03466 LysR substrate binding domain BMQ_1309 PF00583 Acetyltransferase (GNAT) family BMQ_1311 PF00881 Nitroreductase family BMQ_1312 PF00155 Aminotransferase class I and II BMQ_1316 PF01584 CheW-like domain BMQ_1316 PF00072 Response regulator receiver domain BMQ_1317 PF14177 YkyB-like protein BMQ_1318 PF01476 LysM domain BMQ_1318 PF03734 L,D-transpeptidase catalytic domain BMQ_1319 PF02541 Ppx/GppA phosphatase family BMQ_1320 PF17941 Polyphosphate kinase C-terminal domain 1 BMQ_1320 PF13090 Polyphosphate kinase C-terminal domain 2 BMQ_1320 PF13089 Polyphosphate kinase N-terminal domain BMQ_1320 PF02503 Polyphosphate kinase middle domain BMQ_1322 PF10518 TAT (twin-arginine translocation) pathway signal sequence BMQ_1322 PF00149 Calcineurin-like phosphoesterase BMQ_1324 PF00563 EAL domain BMQ_1324 PF10388 EAL-domain associated signalling protein domain BMQ_1327 PF08796 Protein of unknown function (DUF1797) BMQ_1329 PF03466 LysR substrate binding domain BMQ_1329 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_1330 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BMQ_1330 PF00132 Bacterial transferase hexapeptide (six repeats) BMQ_1330 PF14602 Hexapeptide repeat of succinyl-transferase BMQ_1331 PF01546 Peptidase family M20/M25/M40 BMQ_1331 PF07687 Peptidase dimerisation domain BMQ_1332 PF03698 Uncharacterised protein family (UPF0180) BMQ_1333 PF00924 Mechanosensitive ion channel BMQ_1334 PF00578 AhpC/TSA family BMQ_1334 PF10417 C-terminal domain of 1-Cys peroxiredoxin BMQ_1335 PF00578 AhpC/TSA family BMQ_1336 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BMQ_1336 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BMQ_1337 PF00005 ABC transporter BMQ_1337 PF00664 ABC transporter transmembrane region BMQ_1338 PF00664 ABC transporter transmembrane region BMQ_1338 PF00005 ABC transporter BMQ_1339 PF02080 TrkA-C domain BMQ_1339 PF02254 TrkA-N domain BMQ_1340 PF00753 Metallo-beta-lactamase superfamily BMQ_1340 PF17770 Ribonuclease J C-terminal domain BMQ_1340 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BMQ_1343 PF01327 Polypeptide deformylase BMQ_1346 PF00676 Dehydrogenase E1 component BMQ_1347 PF02779 Transketolase, pyrimidine binding domain BMQ_1347 PF02780 Transketolase, C-terminal domain BMQ_1348 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BMQ_1348 PF02817 e3 binding domain BMQ_1348 PF00364 Biotin-requiring enzyme BMQ_1349 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BMQ_1349 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMQ_1353 PF01276 Orn/Lys/Arg decarboxylase, major domain BMQ_1353 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BMQ_1354 PF05256 Uncharacterised protein family (UPF0223) BMQ_1355 PF06335 Protein of unknown function (DUF1054) BMQ_1357 PF00459 Inositol monophosphatase family BMQ_1360 PF14036 YlaH-like protein BMQ_1362 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BMQ_1364 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BMQ_1365 PF13638 PIN domain BMQ_1365 PF02562 PhoH-like protein BMQ_1367 PF07408 Protein of unknown function (DUF1507) BMQ_1368 PF01098 Cell cycle protein BMQ_1369 PF00682 HMGL-like BMQ_1369 PF02436 Conserved carboxylase domain BMQ_1369 PF00289 Biotin carboxylase, N-terminal domain BMQ_1369 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BMQ_1369 PF02785 Biotin carboxylase C-terminal domain BMQ_1369 PF00364 Biotin-requiring enzyme BMQ_1370 PF02628 Cytochrome oxidase assembly protein BMQ_1371 PF01040 UbiA prenyltransferase family BMQ_1372 PF00034 Cytochrome c BMQ_1372 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BMQ_1372 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BMQ_1373 PF00115 Cytochrome C and Quinol oxidase polypeptide I BMQ_1374 PF00510 Cytochrome c oxidase subunit III BMQ_1375 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BMQ_1376 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BMQ_1377 PF08868 YugN-like family BMQ_1378 PF00571 CBS domain BMQ_1379 PF00188 Cysteine-rich secretory protein family BMQ_1379 PF14504 CAP-associated N-terminal BMQ_1380 PF09577 Sporulation protein YpjB (SpoYpjB) BMQ_1381 PF04298 Putative neutral zinc metallopeptidase BMQ_1382 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BMQ_1382 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BMQ_1383 PF03819 MazG nucleotide pyrophosphohydrolase domain BMQ_1384 PF05173 Dihydrodipicolinate reductase, C-terminus BMQ_1384 PF01113 Dihydrodipicolinate reductase, N-terminus BMQ_1385 PF02142 MGS-like domain BMQ_1386 PF02585 GlcNAc-PI de-N-acetylase BMQ_1387 PF00534 Glycosyl transferases group 1 BMQ_1387 PF13439 Glycosyltransferase Family 4 BMQ_1388 PF13735 tRNA nucleotidyltransferase domain 2 putative BMQ_1388 PF12627 Probable RNA and SrmB- binding site of polymerase A BMQ_1388 PF01743 Poly A polymerase head domain BMQ_1389 PF02237 Biotin protein ligase C terminal domain BMQ_1389 PF03099 Biotin/lipoate A/B protein ligase family BMQ_1389 PF08279 HTH domain BMQ_1390 PF02548 Ketopantoate hydroxymethyltransferase BMQ_1391 PF02569 Pantoate-beta-alanine ligase BMQ_1392 PF02261 Aspartate decarboxylase BMQ_1393 PF04851 Type III restriction enzyme, res subunit BMQ_1393 PF13307 Helicase C-terminal domain BMQ_1393 PF00929 Exonuclease BMQ_1395 PF14084 Protein of unknown function (DUF4264) BMQ_1397 PF00155 Aminotransferase class I and II BMQ_1398 PF01336 OB-fold nucleic acid binding domain BMQ_1398 PF00152 tRNA synthetases class II (D, K and N) BMQ_1399 PF07261 Replication initiation and membrane attachment BMQ_1400 PF10576 Iron-sulfur binding domain of endonuclease III BMQ_1400 PF00633 Helix-hairpin-helix motif BMQ_1400 PF00730 HhH-GPD superfamily base excision DNA repair protein BMQ_1402 PF00912 Transglycosylase BMQ_1402 PF00905 Penicillin binding protein transpeptidase domain BMQ_1403 PF03838 Recombination protein U BMQ_1404 PF10720 Protein of unknown function (DUF2515) BMQ_1406 PF08807 Bacterial domain of unknown function (DUF1798) BMQ_1409 PF14179 YppG-like protein BMQ_1412 PF08757 CotH kinase protein BMQ_1415 PF01053 Cys/Met metabolism PLP-dependent enzyme BMQ_1416 PF01053 Cys/Met metabolism PLP-dependent enzyme BMQ_1420 PF00474 Sodium:solute symporter family BMQ_1421 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BMQ_1423 PF00313 'Cold-shock' DNA-binding domain BMQ_1426 PF00990 Diguanylate cyclase, GGDEF domain BMQ_1428 PF00271 Helicase conserved C-terminal domain BMQ_1428 PF09369 Domain of unknown function (DUF1998) BMQ_1428 PF00270 DEAD/DEAH box helicase BMQ_1429 PF13482 RNase_H superfamily BMQ_1431 PF06908 YspA SLOG family BMQ_1433 PF05103 DivIVA protein BMQ_1437 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_1437 PF07730 Histidine kinase BMQ_1438 PF00196 Bacterial regulatory proteins, luxR family BMQ_1438 PF00072 Response regulator receiver domain BMQ_1439 PF16657 Maltogenic Amylase, C-terminal domain BMQ_1439 PF00128 Alpha amylase, catalytic domain BMQ_1440 PF01170 Putative RNA methylase family UPF0020 BMQ_1440 PF02926 THUMP domain BMQ_1443 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_1444 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_1446 PF17912 MalK OB fold domain BMQ_1446 PF03459 TOBE domain BMQ_1446 PF00005 ABC transporter BMQ_1448 PF13307 Helicase C-terminal domain BMQ_1449 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BMQ_1450 PF00156 Phosphoribosyl transferase domain BMQ_1451 PF00860 Permease family BMQ_1452 PF03466 LysR substrate binding domain BMQ_1452 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_1453 PF00171 Aldehyde dehydrogenase family BMQ_1456 PF02797 Chalcone and stilbene synthases, C-terminal domain BMQ_1456 PF00195 Chalcone and stilbene synthases, N-terminal domain BMQ_1457 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BMQ_1458 PF00350 Dynamin family BMQ_1459 PF10127 RNA repair pathway DNA polymerase beta family BMQ_1460 PF10752 Protein of unknown function (DUF2533) BMQ_1464 PF13456 Reverse transcriptase-like BMQ_1465 PF13456 Reverse transcriptase-like BMQ_1466 PF10782 Zinc-finger BMQ_1468 PF00313 'Cold-shock' DNA-binding domain BMQ_1470 PF07690 Major Facilitator Superfamily BMQ_1472 PF00860 Permease family BMQ_1474 PF04951 D-aminopeptidase BMQ_1475 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_1476 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_1476 PF12911 N-terminal TM domain of oligopeptide transport permease C BMQ_1477 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMQ_1477 PF00005 ABC transporter BMQ_1478 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BMQ_1479 PF02016 LD-carboxypeptidase N-terminal domain BMQ_1479 PF17676 LD-carboxypeptidase C-terminal domain BMQ_1480 PF00877 NlpC/P60 family BMQ_1481 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMQ_1481 PF00005 ABC transporter BMQ_1484 PF13302 Acetyltransferase (GNAT) domain BMQ_1485 PF00563 EAL domain BMQ_1485 PF00990 Diguanylate cyclase, GGDEF domain BMQ_1485 PF03707 Bacterial signalling protein N terminal repeat BMQ_1490 PF00072 Response regulator receiver domain BMQ_1490 PF00196 Bacterial regulatory proteins, luxR family BMQ_1491 PF07730 Histidine kinase BMQ_1492 PF00487 Fatty acid desaturase BMQ_1493 PF10990 Protein of unknown function (DUF2809) BMQ_1495 PF13396 Phospholipase_D-nuclease N-terminal BMQ_1495 PF13091 PLD-like domain BMQ_1496 PF06724 Domain of Unknown Function (DUF1206) BMQ_1497 PF10676 Spore germination protein gerPA/gerPF BMQ_1498 PF01476 LysM domain BMQ_1498 PF00877 NlpC/P60 family BMQ_1499 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BMQ_1500 PF00483 Nucleotidyl transferase BMQ_1503 PF07690 Major Facilitator Superfamily BMQ_1506 PF01979 Amidohydrolase family BMQ_1507 PF03841 L-seryl-tRNA selenium transferase BMQ_1508 PF07071 KDGP aldolase BMQ_1510 PF07702 UTRA domain BMQ_1510 PF00392 Bacterial regulatory proteins, gntR family BMQ_1511 PF02447 GntP family permease BMQ_1512 PF03437 BtpA family BMQ_1513 PF13419 Haloacid dehalogenase-like hydrolase BMQ_1515 PF00245 Alkaline phosphatase BMQ_1516 PF01323 DSBA-like thioredoxin domain BMQ_1517 PF00082 Subtilase family BMQ_1519 PF01047 MarR family BMQ_1521 PF07690 Major Facilitator Superfamily BMQ_1522 PF01047 MarR family BMQ_1525 PF14151 YfhD-like protein BMQ_1526 PF01032 FecCD transport family BMQ_1527 PF01032 FecCD transport family BMQ_1528 PF01497 Periplasmic binding protein BMQ_1529 PF00005 ABC transporter BMQ_1531 PF01053 Cys/Met metabolism PLP-dependent enzyme BMQ_1532 PF07690 Major Facilitator Superfamily BMQ_1533 PF00248 Aldo/keto reductase family BMQ_1536 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BMQ_1536 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BMQ_1537 PF01638 HxlR-like helix-turn-helix BMQ_1538 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BMQ_1539 PF08669 Glycine cleavage T-protein C-terminal barrel domain BMQ_1539 PF01571 Aminomethyltransferase folate-binding domain BMQ_1539 PF01266 FAD dependent oxidoreductase BMQ_1539 PF16350 FAD dependent oxidoreductase central domain BMQ_1540 PF01266 FAD dependent oxidoreductase BMQ_1541 PF00355 Rieske [2Fe-2S] domain BMQ_1541 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BMQ_1542 PF00005 ABC transporter BMQ_1542 PF00571 CBS domain BMQ_1543 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_1545 PF00072 Response regulator receiver domain BMQ_1545 PF00512 His Kinase A (phospho-acceptor) domain BMQ_1545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_1545 PF09308 LuxQ, periplasmic BMQ_1546 PF03705 CheR methyltransferase, all-alpha domain BMQ_1546 PF01739 CheR methyltransferase, SAM binding domain BMQ_1547 PF13426 PAS domain BMQ_1547 PF07228 Stage II sporulation protein E (SpoIIE) BMQ_1549 PF13520 Amino acid permease BMQ_1551 PF13419 Haloacid dehalogenase-like hydrolase BMQ_1554 PF02435 Levansucrase/Invertase BMQ_1555 PF00251 Glycosyl hydrolases family 32 N-terminal domain BMQ_1555 PF08244 Glycosyl hydrolases family 32 C terminal BMQ_1556 PF00210 Ferritin-like domain BMQ_1557 PF07690 Major Facilitator Superfamily BMQ_1558 PF00155 Aminotransferase class I and II BMQ_1559 PF01370 NAD dependent epimerase/dehydratase family BMQ_1560 PF09021 HutP BMQ_1561 PF07690 Major Facilitator Superfamily BMQ_1564 PF00171 Aldehyde dehydrogenase family BMQ_1565 PF00753 Metallo-beta-lactamase superfamily BMQ_1568 PF01810 LysE type translocator BMQ_1569 PF00324 Amino acid permease BMQ_1571 PF14139 YpzG-like protein BMQ_1572 PF00753 Metallo-beta-lactamase superfamily BMQ_1572 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BMQ_1572 PF17770 Ribonuclease J C-terminal domain BMQ_1578 PF00324 Amino acid permease BMQ_1581 PF00269 Small, acid-soluble spore proteins, alpha/beta type BMQ_1582 PF00356 Bacterial regulatory proteins, lacI family BMQ_1583 PF01306 LacY proton/sugar symporter BMQ_1584 PF00251 Glycosyl hydrolases family 32 N-terminal domain BMQ_1584 PF08244 Glycosyl hydrolases family 32 C terminal BMQ_1585 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BMQ_1586 PF02435 Levansucrase/Invertase BMQ_1587 PF03610 PTS system fructose IIA component BMQ_1587 PF00158 Sigma-54 interaction domain BMQ_1587 PF00874 PRD domain BMQ_1588 PF03610 PTS system fructose IIA component BMQ_1589 PF03830 PTS system sorbose subfamily IIB component BMQ_1590 PF03609 PTS system sorbose-specific iic component BMQ_1591 PF03613 PTS system mannose/fructose/sorbose family IID component BMQ_1592 PF00251 Glycosyl hydrolases family 32 N-terminal domain BMQ_1592 PF08244 Glycosyl hydrolases family 32 C terminal BMQ_1593 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_1594 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_1595 PF00497 Bacterial extracellular solute-binding proteins, family 3 BMQ_1596 PF03180 NLPA lipoprotein BMQ_1597 PF09383 NIL domain BMQ_1597 PF00005 ABC transporter BMQ_1598 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_1600 PF03180 NLPA lipoprotein BMQ_1602 PF00557 Metallopeptidase family M24 BMQ_1604 PF01569 PAP2 superfamily BMQ_1605 PF00561 alpha/beta hydrolase fold BMQ_1606 PF03323 Bacillus/Clostridium GerA spore germination protein BMQ_1607 PF00232 Glycosyl hydrolase family 1 BMQ_1608 PF07702 UTRA domain BMQ_1608 PF00392 Bacterial regulatory proteins, gntR family BMQ_1611 PF04073 Aminoacyl-tRNA editing domain BMQ_1613 PF00248 Aldo/keto reductase family BMQ_1614 PF00221 Aromatic amino acid lyase BMQ_1615 PF17392 Urocanase C-terminal domain BMQ_1615 PF17391 Urocanase N-terminal domain BMQ_1615 PF01175 Urocanase Rossmann-like domain BMQ_1616 PF01979 Amidohydrolase family BMQ_1617 PF00491 Arginase family BMQ_1618 PF01047 MarR family BMQ_1619 PF01156 Inosine-uridine preferring nucleoside hydrolase BMQ_1620 PF00180 Isocitrate/isopropylmalate dehydrogenase BMQ_1621 PF03606 C4-dicarboxylate anaerobic carrier BMQ_1622 PF01979 Amidohydrolase family BMQ_1623 PF03575 Peptidase family S51 BMQ_1624 PF02954 Bacterial regulatory protein, Fis family BMQ_1624 PF13426 PAS domain BMQ_1624 PF00158 Sigma-54 interaction domain BMQ_1628 PF13302 Acetyltransferase (GNAT) domain BMQ_1630 PF08241 Methyltransferase domain BMQ_1633 PF01047 MarR family BMQ_1634 PF00583 Acetyltransferase (GNAT) family BMQ_1639 PF13419 Haloacid dehalogenase-like hydrolase BMQ_1640 PF00391 PEP-utilising enzyme, mobile domain BMQ_1640 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BMQ_1641 PF00440 Bacterial regulatory proteins, tetR family BMQ_1642 PF07690 Major Facilitator Superfamily BMQ_1643 PF02780 Transketolase, C-terminal domain BMQ_1643 PF00456 Transketolase, thiamine diphosphate binding domain BMQ_1643 PF02779 Transketolase, pyrimidine binding domain BMQ_1644 PF02779 Transketolase, pyrimidine binding domain BMQ_1644 PF02780 Transketolase, C-terminal domain BMQ_1646 PF07729 FCD domain BMQ_1646 PF00392 Bacterial regulatory proteins, gntR family BMQ_1647 PF07690 Major Facilitator Superfamily BMQ_1649 PF02502 Ribose/Galactose Isomerase BMQ_1650 PF00293 NUDIX domain BMQ_1650 PF09297 NADH pyrophosphatase zinc ribbon domain BMQ_1654 PF01476 LysM domain BMQ_1654 PF00877 NlpC/P60 family BMQ_1655 PF02698 DUF218 domain BMQ_1658 PF05163 DinB family BMQ_1663 PF03466 LysR substrate binding domain BMQ_1663 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_1664 PF12697 Alpha/beta hydrolase family BMQ_1666 PF11208 Protein of unknown function (DUF2992) BMQ_1668 PF00561 alpha/beta hydrolase fold BMQ_1671 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BMQ_1671 PF04101 Glycosyltransferase family 28 C-terminal domain BMQ_1672 PF13739 Deacetylase PdaC BMQ_1672 PF01522 Polysaccharide deacetylase BMQ_1672 PF11738 Protein of unknown function (DUF3298) BMQ_1676 PF03845 Spore germination protein BMQ_1678 PF03323 Bacillus/Clostridium GerA spore germination protein BMQ_1679 PF12833 Helix-turn-helix domain BMQ_1681 PF01699 Sodium/calcium exchanger protein BMQ_1682 PF00501 AMP-binding enzyme BMQ_1682 PF13193 AMP-binding enzyme C-terminal domain BMQ_1684 PF03176 MMPL family BMQ_1685 PF08361 MAATS-type transcriptional repressor, C-terminal region BMQ_1685 PF00440 Bacterial regulatory proteins, tetR family BMQ_1686 PF03741 Integral membrane protein TerC family BMQ_1688 PF07875 Coat F domain BMQ_1690 PF01740 STAS domain BMQ_1690 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BMQ_1691 PF01037 Lrp/AsnC ligand binding domain BMQ_1692 PF06906 Protein of unknown function (DUF1272) BMQ_1695 PF00893 Small Multidrug Resistance protein BMQ_1696 PF00893 Small Multidrug Resistance protein BMQ_1697 PF03466 LysR substrate binding domain BMQ_1697 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_1699 PF00313 'Cold-shock' DNA-binding domain BMQ_1700 PF14169 Cold-inducible protein YdjO BMQ_1701 PF00271 Helicase conserved C-terminal domain BMQ_1701 PF00270 DEAD/DEAH box helicase BMQ_1703 PF00313 'Cold-shock' DNA-binding domain BMQ_1706 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BMQ_1706 PF00205 Thiamine pyrophosphate enzyme, central domain BMQ_1706 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BMQ_1714 PF08141 Small acid-soluble spore protein H family BMQ_1715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BMQ_1716 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_1717 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_1718 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMQ_1718 PF00005 ABC transporter BMQ_1719 PF00005 ABC transporter BMQ_1719 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMQ_1720 PF01554 MatE BMQ_1723 PF13581 Histidine kinase-like ATPase domain BMQ_1725 PF07690 Major Facilitator Superfamily BMQ_1726 PF01476 LysM domain BMQ_1726 PF00704 Glycosyl hydrolases family 18 BMQ_1727 PF01476 LysM domain BMQ_1727 PF03734 L,D-transpeptidase catalytic domain BMQ_1728 PF07836 DmpG-like communication domain BMQ_1728 PF00682 HMGL-like BMQ_1729 PF03601 Conserved hypothetical protein 698 BMQ_1733 PF08241 Methyltransferase domain BMQ_1735 PF01638 HxlR-like helix-turn-helix BMQ_1736 PF00753 Metallo-beta-lactamase superfamily BMQ_1737 PF00795 Carbon-nitrogen hydrolase BMQ_1739 PF13302 Acetyltransferase (GNAT) domain BMQ_1740 PF13229 Right handed beta helix region BMQ_1741 PF00154 recA bacterial DNA recombination protein BMQ_1742 PF01451 Low molecular weight phosphotyrosine protein phosphatase BMQ_1743 PF02040 Arsenical pump membrane protein BMQ_1744 PF01022 Bacterial regulatory protein, arsR family BMQ_1745 PF01022 Bacterial regulatory protein, arsR family BMQ_1746 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BMQ_1747 PF00582 Universal stress protein family BMQ_1747 PF00999 Sodium/hydrogen exchanger family BMQ_1750 PF01569 PAP2 superfamily BMQ_1751 PF01447 Thermolysin metallopeptidase, catalytic domain BMQ_1751 PF07504 Fungalysin/Thermolysin Propeptide Motif BMQ_1751 PF03413 Peptidase propeptide and YPEB domain BMQ_1751 PF02868 Thermolysin metallopeptidase, alpha-helical domain BMQ_1754 PF03466 LysR substrate binding domain BMQ_1754 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_1755 PF01323 DSBA-like thioredoxin domain BMQ_1756 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BMQ_1756 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMQ_1757 PF06628 Catalase-related immune-responsive BMQ_1757 PF00199 Catalase BMQ_1758 PF01740 STAS domain BMQ_1759 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BMQ_1759 PF01740 STAS domain BMQ_1763 PF02567 Phenazine biosynthesis-like protein BMQ_1765 PF07875 Coat F domain BMQ_1767 PF00107 Zinc-binding dehydrogenase BMQ_1767 PF13823 Alcohol dehydrogenase GroES-associated BMQ_1767 PF08240 Alcohol dehydrogenase GroES-like domain BMQ_1768 PF07875 Coat F domain BMQ_1770 PF01451 Low molecular weight phosphotyrosine protein phosphatase BMQ_1771 PF00072 Response regulator receiver domain BMQ_1771 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_1771 PF09308 LuxQ, periplasmic BMQ_1771 PF00512 His Kinase A (phospho-acceptor) domain BMQ_1772 PF04397 LytTr DNA-binding domain BMQ_1772 PF00072 Response regulator receiver domain BMQ_1773 PF00356 Bacterial regulatory proteins, lacI family BMQ_1774 PF01261 Xylose isomerase-like TIM barrel BMQ_1775 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BMQ_1775 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMQ_1776 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMQ_1776 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BMQ_1777 PF01261 Xylose isomerase-like TIM barrel BMQ_1778 PF07690 Major Facilitator Superfamily BMQ_1786 PF02567 Phenazine biosynthesis-like protein BMQ_1787 PF03819 MazG nucleotide pyrophosphohydrolase domain BMQ_1788 PF03641 Possible lysine decarboxylase BMQ_1789 PF08241 Methyltransferase domain BMQ_1791 PF13411 MerR HTH family regulatory protein BMQ_1792 PF00313 'Cold-shock' DNA-binding domain BMQ_1803 PF00324 Amino acid permease BMQ_1804 PF12833 Helix-turn-helix domain BMQ_1804 PF02311 AraC-like ligand binding domain BMQ_1805 PF00465 Iron-containing alcohol dehydrogenase BMQ_1806 PF02733 Dak1 domain BMQ_1814 PF12146 Serine aminopeptidase, S33 BMQ_1817 PF06821 Serine hydrolase BMQ_1818 PF02386 Cation transport protein BMQ_1819 PF05504 Spore germination B3/ GerAC like, C-terminal BMQ_1820 PF03845 Spore germination protein BMQ_1822 PF00313 'Cold-shock' DNA-binding domain BMQ_1824 PF00155 Aminotransferase class I and II BMQ_1824 PF00392 Bacterial regulatory proteins, gntR family BMQ_1825 PF00892 EamA-like transporter family BMQ_1828 PF01209 ubiE/COQ5 methyltransferase family BMQ_1831 PF00857 Isochorismatase family BMQ_1832 PF01808 AICARFT/IMPCHase bienzyme BMQ_1832 PF02142 MGS-like domain BMQ_1833 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BMQ_1833 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BMQ_1834 PF05525 Branched-chain amino acid transport protein BMQ_1836 PF00817 impB/mucB/samB family BMQ_1836 PF11799 impB/mucB/samB family C-terminal domain BMQ_1836 PF11798 IMS family HHH motif BMQ_1837 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BMQ_1838 PF08863 YolD-like protein BMQ_1842 PF00175 Oxidoreductase NAD-binding domain BMQ_1842 PF00970 Oxidoreductase FAD-binding domain BMQ_1842 PF00042 Globin BMQ_1844 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BMQ_1844 PF00391 PEP-utilising enzyme, mobile domain BMQ_1845 PF04073 Aminoacyl-tRNA editing domain BMQ_1846 PF17247 Family of unknown function (DUF5316) BMQ_1847 PF00083 Sugar (and other) transporter BMQ_1851 PF00171 Aldehyde dehydrogenase family BMQ_1854 PF00923 Transaldolase/Fructose-6-phosphate aldolase BMQ_1857 PF01263 Aldose 1-epimerase BMQ_1859 PF00571 CBS domain BMQ_1861 PF00067 Cytochrome P450 BMQ_1862 PF00440 Bacterial regulatory proteins, tetR family BMQ_1862 PF17922 Tetracyclin repressor-like, C-terminal domain BMQ_1863 PF00480 ROK family BMQ_1865 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BMQ_1865 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BMQ_1866 PF00083 Sugar (and other) transporter BMQ_1867 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BMQ_1868 PF00115 Cytochrome C and Quinol oxidase polypeptide I BMQ_1869 PF00510 Cytochrome c oxidase subunit III BMQ_1870 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BMQ_1871 PF00582 Universal stress protein family BMQ_1874 PF02628 Cytochrome oxidase assembly protein BMQ_1875 PF13454 FAD-NAD(P)-binding BMQ_1877 PF00860 Permease family BMQ_1878 PF03600 Citrate transporter BMQ_1879 PF00676 Dehydrogenase E1 component BMQ_1880 PF02779 Transketolase, pyrimidine binding domain BMQ_1880 PF02780 Transketolase, C-terminal domain BMQ_1881 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BMQ_1881 PF00364 Biotin-requiring enzyme BMQ_1881 PF02817 e3 binding domain BMQ_1882 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BMQ_1882 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMQ_1883 PF01590 GAF domain BMQ_1883 PF00158 Sigma-54 interaction domain BMQ_1883 PF02954 Bacterial regulatory protein, Fis family BMQ_1884 PF08240 Alcohol dehydrogenase GroES-like domain BMQ_1884 PF00107 Zinc-binding dehydrogenase BMQ_1886 PF01053 Cys/Met metabolism PLP-dependent enzyme BMQ_1887 PF01047 MarR family BMQ_1888 PF08666 SAF domain BMQ_1888 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BMQ_1889 PF13426 PAS domain BMQ_1889 PF00158 Sigma-54 interaction domain BMQ_1889 PF02954 Bacterial regulatory protein, Fis family BMQ_1890 PF00701 Dihydrodipicolinate synthetase family BMQ_1891 PF00171 Aldehyde dehydrogenase family BMQ_1892 PF07690 Major Facilitator Superfamily BMQ_1893 PF13378 Enolase C-terminal domain-like BMQ_1894 PF07729 FCD domain BMQ_1894 PF00392 Bacterial regulatory proteins, gntR family BMQ_1898 PF01594 AI-2E family transporter BMQ_1899 PF02416 mttA/Hcf106 family BMQ_1900 PF08532 Beta-galactosidase trimerisation domain BMQ_1900 PF08533 Beta-galactosidase C-terminal domain BMQ_1900 PF02449 Beta-galactosidase BMQ_1904 PF08858 IDEAL domain BMQ_1904 PF08864 UPF0302 domain BMQ_1905 PF00582 Universal stress protein family BMQ_1906 PF00672 HAMP domain BMQ_1906 PF13426 PAS domain BMQ_1906 PF00512 His Kinase A (phospho-acceptor) domain BMQ_1906 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_1907 PF00486 Transcriptional regulatory protein, C terminal BMQ_1907 PF00072 Response regulator receiver domain BMQ_1908 PF02583 Metal-sensitive transcriptional repressor BMQ_1909 PF00403 Heavy-metal-associated domain BMQ_1910 PF00403 Heavy-metal-associated domain BMQ_1912 PF07563 Protein of unknown function (DUF1541) BMQ_1913 PF07690 Major Facilitator Superfamily BMQ_1919 PF01022 Bacterial regulatory protein, arsR family BMQ_1920 PF02040 Arsenical pump membrane protein BMQ_1930 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BMQ_1933 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BMQ_1934 PF07451 Stage V sporulation protein AD (SpoVAD) BMQ_1935 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BMQ_1937 PF04239 Protein of unknown function (DUF421) BMQ_1938 PF04239 Protein of unknown function (DUF421) BMQ_1939 PF01544 CorA-like Mg2+ transporter protein BMQ_1940 PF00892 EamA-like transporter family BMQ_1941 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_1941 PF03466 LysR substrate binding domain BMQ_1942 PF00534 Glycosyl transferases group 1 BMQ_1942 PF13439 Glycosyltransferase Family 4 BMQ_1943 PF01381 Helix-turn-helix BMQ_1945 PF01131 DNA topoisomerase BMQ_1945 PF01751 Toprim domain BMQ_1946 PF04740 LXG domain of WXG superfamily BMQ_1946 PF14449 Pre-toxin TG BMQ_1952 PF03061 Thioesterase superfamily BMQ_1953 PF00293 NUDIX domain BMQ_1954 PF04239 Protein of unknown function (DUF421) BMQ_1958 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BMQ_1958 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BMQ_1959 PF07729 FCD domain BMQ_1959 PF00392 Bacterial regulatory proteins, gntR family BMQ_1960 PF00180 Isocitrate/isopropylmalate dehydrogenase BMQ_1961 PF07690 Major Facilitator Superfamily BMQ_1962 PF01638 HxlR-like helix-turn-helix BMQ_1963 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BMQ_1963 PF00925 GTP cyclohydrolase II BMQ_1964 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BMQ_1964 PF01872 RibD C-terminal domain BMQ_1969 PF01209 ubiE/COQ5 methyltransferase family BMQ_1973 PF00581 Rhodanese-like domain BMQ_1975 PF13539 D-alanyl-D-alanine carboxypeptidase BMQ_1977 PF01522 Polysaccharide deacetylase BMQ_1981 PF04204 Homoserine O-succinyltransferase BMQ_1982 PF01268 Formate--tetrahydrofolate ligase BMQ_1984 PF00255 Glutathione peroxidase BMQ_1985 PF01966 HD domain BMQ_1986 PF12848 ABC transporter BMQ_1986 PF16326 ABC transporter C-terminal domain BMQ_1986 PF00005 ABC transporter BMQ_1987 PF13769 Virulence factor BMQ_1987 PF08712 Scaffold protein Nfu/NifU N terminal BMQ_1988 PF11738 Protein of unknown function (DUF3298) BMQ_1988 PF13739 Deacetylase PdaC BMQ_1988 PF01522 Polysaccharide deacetylase BMQ_1989 PF06491 Disulphide isomerase BMQ_1990 PF04445 Putative SAM-dependent methyltransferase BMQ_1991 PF14005 YpjP-like protein BMQ_1992 PF00085 Thioredoxin BMQ_1993 PF01497 Periplasmic binding protein BMQ_1995 PF03186 CobD/Cbib protein BMQ_1996 PF00155 Aminotransferase class I and II BMQ_1998 PF02654 Cobalamin-5-phosphate synthase BMQ_1999 PF00300 Histidine phosphatase superfamily (branch 1) BMQ_2001 PF01923 Cobalamin adenosyltransferase BMQ_2002 PF00892 EamA-like transporter family BMQ_2003 PF13411 MerR HTH family regulatory protein BMQ_2005 PF02492 CobW/HypB/UreG, nucleotide-binding domain BMQ_2005 PF07683 Cobalamin synthesis protein cobW C-terminal domain BMQ_2006 PF02558 Ketopantoate reductase PanE/ApbA BMQ_2006 PF08546 Ketopantoate reductase PanE/ApbA C terminal BMQ_2007 PF01541 GIY-YIG catalytic domain BMQ_2007 PF08459 UvrC Helix-hairpin-helix N-terminal BMQ_2009 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BMQ_2009 PF01367 5'-3' exonuclease, C-terminal SAM fold BMQ_2010 PF08830 Protein of unknown function (DUF1806) BMQ_2011 PF02585 GlcNAc-PI de-N-acetylase BMQ_2012 PF03807 NADP oxidoreductase coenzyme F420-dependent BMQ_2012 PF14748 Pyrroline-5-carboxylate reductase dimerisation BMQ_2013 PF04134 Protein of unknown function, DUF393 BMQ_2014 PF08281 Sigma-70, region 4 BMQ_2014 PF04542 Sigma-70 region 2 BMQ_2016 PF00011 Hsp20/alpha crystallin family BMQ_2017 PF02334 Replication terminator protein BMQ_2018 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BMQ_2018 PF18277 AbrB C-terminal domain BMQ_2019 PF01554 MatE BMQ_2021 PF01593 Flavin containing amine oxidoreductase BMQ_2022 PF00535 Glycosyl transferase family 2 BMQ_2025 PF00884 Sulfatase BMQ_2027 PF05816 Toxic anion resistance protein (TelA) BMQ_2031 PF11738 Protein of unknown function (DUF3298) BMQ_2031 PF01522 Polysaccharide deacetylase BMQ_2031 PF13739 Deacetylase PdaC BMQ_2032 PF00999 Sodium/hydrogen exchanger family BMQ_2032 PF02080 TrkA-C domain BMQ_2032 PF03471 Transporter associated domain BMQ_2033 PF02225 PA domain BMQ_2033 PF04389 Peptidase family M28 BMQ_2034 PF00989 PAS fold BMQ_2034 PF13426 PAS domain BMQ_2034 PF13188 PAS domain BMQ_2034 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_2034 PF00512 His Kinase A (phospho-acceptor) domain BMQ_2036 PF00375 Sodium:dicarboxylate symporter family BMQ_2037 PF00128 Alpha amylase, catalytic domain BMQ_2037 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BMQ_2037 PF03714 Bacterial pullanase-associated domain BMQ_2038 PF00171 Aldehyde dehydrogenase family BMQ_2039 PF00258 Flavodoxin BMQ_2039 PF00175 Oxidoreductase NAD-binding domain BMQ_2039 PF00667 FAD binding domain BMQ_2039 PF00067 Cytochrome P450 BMQ_2041 PF01618 MotA/TolQ/ExbB proton channel family BMQ_2042 PF00691 OmpA family BMQ_2042 PF13677 Membrane MotB of proton-channel complex MotA/MotB BMQ_2044 PF01593 Flavin containing amine oxidoreductase BMQ_2045 PF09844 Uncharacterized conserved protein (COG2071) BMQ_2046 PF01625 Peptide methionine sulfoxide reductase BMQ_2047 PF03553 Na+/H+ antiporter family BMQ_2048 PF00392 Bacterial regulatory proteins, gntR family BMQ_2048 PF07729 FCD domain BMQ_2049 PF00324 Amino acid permease BMQ_2050 PF01757 Acyltransferase family BMQ_2051 PF05698 Bacterial trigger factor protein (TF) C-terminus BMQ_2052 PF00486 Transcriptional regulatory protein, C terminal BMQ_2052 PF00072 Response regulator receiver domain BMQ_2053 PF00512 His Kinase A (phospho-acceptor) domain BMQ_2053 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_2054 PF01979 Amidohydrolase family BMQ_2055 PF00854 POT family BMQ_2057 PF00390 Malic enzyme, N-terminal domain BMQ_2057 PF03949 Malic enzyme, NAD binding domain BMQ_2058 PF03390 2-hydroxycarboxylate transporter family BMQ_2060 PF00296 Luciferase-like monooxygenase BMQ_2063 PF00462 Glutaredoxin BMQ_2064 PF00497 Bacterial extracellular solute-binding proteins, family 3 BMQ_2065 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_2066 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_2067 PF00005 ABC transporter BMQ_2068 PF01687 Riboflavin kinase BMQ_2069 PF00296 Luciferase-like monooxygenase BMQ_2071 PF01520 N-acetylmuramoyl-L-alanine amidase BMQ_2071 PF05036 Sporulation related domain BMQ_2078 PF00067 Cytochrome P450 BMQ_2079 PF03641 Possible lysine decarboxylase BMQ_2080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BMQ_2080 PF00390 Malic enzyme, N-terminal domain BMQ_2080 PF03949 Malic enzyme, NAD binding domain BMQ_2081 PF03703 Bacterial PH domain BMQ_2082 PF03703 Bacterial PH domain BMQ_2083 PF00291 Pyridoxal-phosphate dependent enzyme BMQ_2084 PF00294 pfkB family carbohydrate kinase BMQ_2085 PF01040 UbiA prenyltransferase family BMQ_2086 PF05908 Poly-gamma-glutamate hydrolase BMQ_2090 PF13411 MerR HTH family regulatory protein BMQ_2095 PF08141 Small acid-soluble spore protein H family BMQ_2096 PF13039 Protein of unknown function (DUF3900) BMQ_2096 PF13037 Domain of unknown function (DUF3898) BMQ_2097 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_2097 PF03466 LysR substrate binding domain BMQ_2098 PF01645 Conserved region in glutamate synthase BMQ_2098 PF04898 Glutamate synthase central domain BMQ_2098 PF00310 Glutamine amidotransferases class-II BMQ_2098 PF01493 GXGXG motif BMQ_2099 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BMQ_2099 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMQ_2103 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BMQ_2103 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BMQ_2106 PF13091 PLD-like domain BMQ_2108 PF01047 MarR family BMQ_2109 PF03788 LrgA family BMQ_2110 PF04172 LrgB-like family BMQ_2111 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BMQ_2111 PF01740 STAS domain BMQ_2114 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase BMQ_2115 PF00535 Glycosyl transferase family 2 BMQ_2116 PF04138 GtrA-like protein BMQ_2117 PF00483 Nucleotidyl transferase BMQ_2118 PF00072 Response regulator receiver domain BMQ_2118 PF00486 Transcriptional regulatory protein, C terminal BMQ_2119 PF00512 His Kinase A (phospho-acceptor) domain BMQ_2119 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_2119 PF00672 HAMP domain BMQ_2120 PF10055 Uncharacterized small protein (DUF2292) BMQ_2123 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_2124 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_2125 PF12857 TOBE-like domain BMQ_2125 PF17850 CysA C-terminal regulatory domain BMQ_2125 PF00005 ABC transporter BMQ_2126 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BMQ_2126 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BMQ_2127 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BMQ_2127 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BMQ_2130 PF08220 DeoR-like helix-turn-helix domain BMQ_2130 PF00455 DeoR C terminal sensor domain BMQ_2131 PF00294 pfkB family carbohydrate kinase BMQ_2132 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BMQ_2132 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BMQ_2133 PF13840 ACT domain BMQ_2133 PF00696 Amino acid kinase family BMQ_2135 PF00080 Copper/zinc superoxide dismutase (SODC) BMQ_2136 PF01593 Flavin containing amine oxidoreductase BMQ_2138 PF00106 short chain dehydrogenase BMQ_2139 PF01022 Bacterial regulatory protein, arsR family BMQ_2140 PF00171 Aldehyde dehydrogenase family BMQ_2141 PF03070 TENA/THI-4/PQQC family BMQ_2144 PF00209 Sodium:neurotransmitter symporter family BMQ_2145 PF07486 Cell Wall Hydrolase BMQ_2146 PF00356 Bacterial regulatory proteins, lacI family BMQ_2148 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BMQ_2148 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMQ_2149 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMQ_2149 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BMQ_2150 PF01261 Xylose isomerase-like TIM barrel BMQ_2151 PF02245 Methylpurine-DNA glycosylase (MPG) BMQ_2153 PF01225 Mur ligase family, catalytic domain BMQ_2153 PF08245 Mur ligase middle domain BMQ_2153 PF02875 Mur ligase family, glutamate ligase domain BMQ_2155 PF00583 Acetyltransferase (GNAT) family BMQ_2156 PF08360 QacR-like protein, C-terminal region BMQ_2156 PF00440 Bacterial regulatory proteins, tetR family BMQ_2157 PF07690 Major Facilitator Superfamily BMQ_2158 PF02110 Hydroxyethylthiazole kinase family BMQ_2159 PF02581 Thiamine monophosphate synthase BMQ_2160 PF16242 Pyridoxamine 5'-phosphate oxidase like BMQ_2164 PF08281 Sigma-70, region 4 BMQ_2164 PF04542 Sigma-70 region 2 BMQ_2165 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BMQ_2166 PF07728 AAA domain (dynein-related subfamily) BMQ_2167 PF00092 von Willebrand factor type A domain BMQ_2168 PF00892 EamA-like transporter family BMQ_2169 PF00703 Glycosyl hydrolases family 2 BMQ_2169 PF02837 Glycosyl hydrolases family 2, sugar binding domain BMQ_2169 PF02929 Beta galactosidase small chain BMQ_2169 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BMQ_2169 PF16353 Domain of unknown function(DUF4981) BMQ_2170 PF12833 Helix-turn-helix domain BMQ_2173 PF13302 Acetyltransferase (GNAT) domain BMQ_2174 PF00005 ABC transporter BMQ_2177 PF13249 Squalene-hopene cyclase N-terminal domain BMQ_2177 PF13243 Squalene-hopene cyclase C-terminal domain BMQ_2179 PF03853 YjeF-related protein N-terminus BMQ_2179 PF01256 Carbohydrate kinase BMQ_2181 PF02567 Phenazine biosynthesis-like protein BMQ_2184 PF01925 Sulfite exporter TauE/SafE BMQ_2185 PF11495 Archaeal transcriptional regulator TrmB BMQ_2185 PF01978 Sugar-specific transcriptional regulator TrmB BMQ_2186 PF02525 Flavodoxin-like fold BMQ_2189 PF00072 Response regulator receiver domain BMQ_2189 PF00486 Transcriptional regulatory protein, C terminal BMQ_2190 PF00512 His Kinase A (phospho-acceptor) domain BMQ_2190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_2191 PF00155 Aminotransferase class I and II BMQ_2191 PF00392 Bacterial regulatory proteins, gntR family BMQ_2192 PF01810 LysE type translocator BMQ_2193 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BMQ_2198 PF01381 Helix-turn-helix BMQ_2198 PF08671 Anti-repressor SinI BMQ_2199 PF01494 FAD binding domain BMQ_2201 PF00293 NUDIX domain BMQ_2202 PF00857 Isochorismatase family BMQ_2203 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BMQ_2203 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BMQ_2203 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BMQ_2204 PF01467 Cytidylyltransferase-like BMQ_2205 PF02540 NAD synthase BMQ_2206 PF00575 S1 RNA binding domain BMQ_2207 PF02225 PA domain BMQ_2207 PF13860 FlgD Ig-like domain BMQ_2207 PF05922 Peptidase inhibitor I9 BMQ_2207 PF00082 Subtilase family BMQ_2209 PF00708 Acylphosphatase BMQ_2210 PF07690 Major Facilitator Superfamily BMQ_2211 PF00296 Luciferase-like monooxygenase BMQ_2213 PF12833 Helix-turn-helix domain BMQ_2213 PF07883 Cupin domain BMQ_2214 PF00892 EamA-like transporter family BMQ_2215 PF00005 ABC transporter BMQ_2215 PF12848 ABC transporter BMQ_2216 PF03323 Bacillus/Clostridium GerA spore germination protein BMQ_2217 PF03845 Spore germination protein BMQ_2218 PF05504 Spore germination B3/ GerAC like, C-terminal BMQ_2219 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ BMQ_2220 PF00005 ABC transporter BMQ_2222 PF03553 Na+/H+ antiporter family BMQ_2224 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BMQ_2224 PF00356 Bacterial regulatory proteins, lacI family BMQ_2225 PF11132 Transcriptional regulator protein (SplA) BMQ_2230 PF01131 DNA topoisomerase BMQ_2230 PF01751 Toprim domain BMQ_2233 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BMQ_2233 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMQ_2238 PF13091 PLD-like domain BMQ_2242 PF03553 Na+/H+ antiporter family BMQ_2243 PF03845 Spore germination protein BMQ_2244 PF05504 Spore germination B3/ GerAC like, C-terminal BMQ_2245 PF03323 Bacillus/Clostridium GerA spore germination protein BMQ_2247 PF13302 Acetyltransferase (GNAT) domain BMQ_2249 PF04294 VanW like protein BMQ_2255 PF11181 Heat induced stress protein YflT BMQ_2257 PF09382 RQC domain BMQ_2257 PF00271 Helicase conserved C-terminal domain BMQ_2257 PF00270 DEAD/DEAH box helicase BMQ_2257 PF00570 HRDC domain BMQ_2257 PF16124 RecQ zinc-binding BMQ_2258 PF00158 Sigma-54 interaction domain BMQ_2259 PF00491 Arginase family BMQ_2261 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BMQ_2263 PF01040 UbiA prenyltransferase family BMQ_2264 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BMQ_2264 PF01411 tRNA synthetases class II (A) BMQ_2264 PF02272 DHHA1 domain BMQ_2265 PF01061 ABC-2 type transporter BMQ_2266 PF08000 Bacterial PH domain BMQ_2267 PF07690 Major Facilitator Superfamily BMQ_2268 PF03466 LysR substrate binding domain BMQ_2268 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_2269 PF00392 Bacterial regulatory proteins, gntR family BMQ_2270 PF00005 ABC transporter BMQ_2272 PF08281 Sigma-70, region 4 BMQ_2272 PF04542 Sigma-70 region 2 BMQ_2274 PF11799 impB/mucB/samB family C-terminal domain BMQ_2274 PF11798 IMS family HHH motif BMQ_2274 PF00817 impB/mucB/samB family BMQ_2275 PF02566 OsmC-like protein BMQ_2276 PF01047 MarR family BMQ_2280 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) BMQ_2282 PF01476 LysM domain BMQ_2282 PF06725 3D domain BMQ_2286 PF00512 His Kinase A (phospho-acceptor) domain BMQ_2286 PF00989 PAS fold BMQ_2286 PF13426 PAS domain BMQ_2286 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_2286 PF13188 PAS domain BMQ_2287 PF14748 Pyrroline-5-carboxylate reductase dimerisation BMQ_2287 PF03807 NADP oxidoreductase coenzyme F420-dependent BMQ_2288 PF01472 PUA domain BMQ_2288 PF00696 Amino acid kinase family BMQ_2289 PF00171 Aldehyde dehydrogenase family BMQ_2292 PF03737 Aldolase/RraA BMQ_2295 PF03176 MMPL family BMQ_2297 PF00269 Small, acid-soluble spore proteins, alpha/beta type BMQ_2298 PF03631 Virulence factor BrkB BMQ_2300 PF07859 alpha/beta hydrolase fold BMQ_2305 PF01850 PIN domain BMQ_2307 PF14602 Hexapeptide repeat of succinyl-transferase BMQ_2307 PF12464 Maltose acetyltransferase BMQ_2308 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BMQ_2310 PF01740 STAS domain BMQ_2311 PF11755 Protein of unknown function (DUF3311) BMQ_2312 PF00474 Sodium:solute symporter family BMQ_2315 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BMQ_2315 PF11490 DNA polymerase III polC-type N-terminus II BMQ_2315 PF07733 Bacterial DNA polymerase III alpha NTPase domain BMQ_2315 PF14480 DNA polymerase III polC-type N-terminus I BMQ_2315 PF02811 PHP domain BMQ_2315 PF00929 Exonuclease BMQ_2315 PF14579 Helix-hairpin-helix motif BMQ_2318 PF05547 Immune inhibitor A peptidase M6 BMQ_2321 PF01183 Glycosyl hydrolases family 25 BMQ_2321 PF01471 Putative peptidoglycan binding domain BMQ_2326 PF03413 Peptidase propeptide and YPEB domain BMQ_2326 PF01447 Thermolysin metallopeptidase, catalytic domain BMQ_2326 PF02868 Thermolysin metallopeptidase, alpha-helical domain BMQ_2326 PF07504 Fungalysin/Thermolysin Propeptide Motif BMQ_2328 PF00923 Transaldolase/Fructose-6-phosphate aldolase BMQ_2331 PF00881 Nitroreductase family BMQ_2333 PF00106 short chain dehydrogenase BMQ_2337 PF01546 Peptidase family M20/M25/M40 BMQ_2337 PF07687 Peptidase dimerisation domain BMQ_2340 PF03551 Transcriptional regulator PadR-like family BMQ_2342 PF01596 O-methyltransferase BMQ_2343 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_2343 PF03466 LysR substrate binding domain BMQ_2346 PF00375 Sodium:dicarboxylate symporter family BMQ_2347 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BMQ_2347 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BMQ_2349 PF01266 FAD dependent oxidoreductase BMQ_2350 PF10925 Protein of unknown function (DUF2680) BMQ_2351 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_2351 PF00989 PAS fold BMQ_2351 PF00512 His Kinase A (phospho-acceptor) domain BMQ_2351 PF08447 PAS fold BMQ_2353 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BMQ_2353 PF02770 Acyl-CoA dehydrogenase, middle domain BMQ_2353 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BMQ_2355 PF13193 AMP-binding enzyme C-terminal domain BMQ_2355 PF00501 AMP-binding enzyme BMQ_2356 PF16925 Tetracyclin repressor-like, C-terminal domain BMQ_2356 PF00440 Bacterial regulatory proteins, tetR family BMQ_2357 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BMQ_2357 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BMQ_2358 PF00378 Enoyl-CoA hydratase/isomerase BMQ_2361 PF04029 2-phosphosulpholactate phosphatase BMQ_2362 PF02770 Acyl-CoA dehydrogenase, middle domain BMQ_2362 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BMQ_2362 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BMQ_2364 PF00378 Enoyl-CoA hydratase/isomerase BMQ_2365 PF00107 Zinc-binding dehydrogenase BMQ_2365 PF08240 Alcohol dehydrogenase GroES-like domain BMQ_2366 PF01680 SOR/SNZ family BMQ_2369 PF01144 Coenzyme A transferase BMQ_2370 PF01144 Coenzyme A transferase BMQ_2371 PF00108 Thiolase, N-terminal domain BMQ_2371 PF02803 Thiolase, C-terminal domain BMQ_2372 PF00202 Aminotransferase class-III BMQ_2374 PF00171 Aldehyde dehydrogenase family BMQ_2377 PF12544 Lysine-2,3-aminomutase BMQ_2378 PF14122 YokU-like protein, putative antitoxin BMQ_2379 PF00324 Amino acid permease BMQ_2380 PF00753 Metallo-beta-lactamase superfamily BMQ_2383 PF00465 Iron-containing alcohol dehydrogenase BMQ_2384 PF07690 Major Facilitator Superfamily BMQ_2386 PF07478 D-ala D-ala ligase C-terminus BMQ_2386 PF01820 D-ala D-ala ligase N-terminus BMQ_2388 PF00892 EamA-like transporter family BMQ_2390 PF00155 Aminotransferase class I and II BMQ_2391 PF07486 Cell Wall Hydrolase BMQ_2396 PF13520 Amino acid permease BMQ_2397 PF07690 Major Facilitator Superfamily BMQ_2398 PF01047 MarR family BMQ_2399 PF03176 MMPL family BMQ_2402 PF03459 TOBE domain BMQ_2402 PF17912 MalK OB fold domain BMQ_2402 PF00005 ABC transporter BMQ_2403 PF01380 SIS domain BMQ_2404 PF01547 Bacterial extracellular solute-binding protein BMQ_2405 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_2406 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_2407 PF00294 pfkB family carbohydrate kinase BMQ_2408 PF07702 UTRA domain BMQ_2408 PF00392 Bacterial regulatory proteins, gntR family BMQ_2409 PF01740 STAS domain BMQ_2409 PF13426 PAS domain BMQ_2410 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BMQ_2411 PF01022 Bacterial regulatory protein, arsR family BMQ_2413 PF12697 Alpha/beta hydrolase family BMQ_2415 PF08450 SMP-30/Gluconolactonase/LRE-like region BMQ_2416 PF01152 Bacterial-like globin BMQ_2417 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal BMQ_2417 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal BMQ_2418 PF05675 Protein of unknown function (DUF817) BMQ_2420 PF00183 Hsp90 protein BMQ_2421 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BMQ_2421 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BMQ_2421 PF01842 ACT domain BMQ_2426 PF13291 ACT domain BMQ_2426 PF04607 Region found in RelA / SpoT proteins BMQ_2426 PF02824 TGS domain BMQ_2427 PF01183 Glycosyl hydrolases family 25 BMQ_2427 PF01471 Putative peptidoglycan binding domain BMQ_2429 PF00892 EamA-like transporter family BMQ_2430 PF00155 Aminotransferase class I and II BMQ_2430 PF00392 Bacterial regulatory proteins, gntR family BMQ_2434 PF06150 ChaB BMQ_2435 PF14864 Alkyl sulfatase C-terminal BMQ_2435 PF14863 Alkyl sulfatase dimerisation BMQ_2435 PF00753 Metallo-beta-lactamase superfamily BMQ_2437 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BMQ_2437 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BMQ_2440 PF00005 ABC transporter BMQ_2452 PF01497 Periplasmic binding protein BMQ_2453 PF07977 FabA-like domain BMQ_2455 PF00293 NUDIX domain BMQ_2456 PF13460 NAD(P)H-binding BMQ_2457 PF00501 AMP-binding enzyme BMQ_2457 PF13193 AMP-binding enzyme C-terminal domain BMQ_2458 PF01047 MarR family BMQ_2459 PF04294 VanW like protein BMQ_2460 PF13193 AMP-binding enzyme C-terminal domain BMQ_2460 PF00501 AMP-binding enzyme BMQ_2467 PF00282 Pyridoxal-dependent decarboxylase conserved domain BMQ_2470 PF00679 Elongation factor G C-terminus BMQ_2470 PF00009 Elongation factor Tu GTP binding domain BMQ_2470 PF14492 Elongation Factor G, domain II BMQ_2470 PF03764 Elongation factor G, domain IV BMQ_2473 PF01226 Formate/nitrite transporter BMQ_2474 PF10057 Uncharacterized conserved protein (DUF2294) BMQ_2476 PF07690 Major Facilitator Superfamily BMQ_2477 PF01565 FAD binding domain BMQ_2478 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BMQ_2478 PF02743 Cache domain BMQ_2478 PF00672 HAMP domain BMQ_2479 PF12850 Calcineurin-like phosphoesterase superfamily domain BMQ_2481 PF00149 Calcineurin-like phosphoesterase BMQ_2482 PF03167 Uracil DNA glycosylase superfamily BMQ_2483 PF00877 NlpC/P60 family BMQ_2484 PF02602 Uroporphyrinogen-III synthase HemD BMQ_2485 PF09339 IclR helix-turn-helix domain BMQ_2485 PF01614 Bacterial transcriptional regulator BMQ_2486 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BMQ_2486 PF00289 Biotin carboxylase, N-terminal domain BMQ_2486 PF02785 Biotin carboxylase C-terminal domain BMQ_2487 PF00364 Biotin-requiring enzyme BMQ_2488 PF02626 Carboxyltransferase domain, subdomain A and B BMQ_2489 PF02682 Carboxyltransferase domain, subdomain C and D BMQ_2490 PF07286 Protein of unknown function (DUF1445) BMQ_2491 PF01566 Natural resistance-associated macrophage protein BMQ_2492 PF03746 LamB/YcsF family BMQ_2493 PF00128 Alpha amylase, catalytic domain BMQ_2493 PF11941 Domain of unknown function (DUF3459) BMQ_2495 PF00501 AMP-binding enzyme BMQ_2495 PF13193 AMP-binding enzyme C-terminal domain BMQ_2496 PF02632 BioY family BMQ_2497 PF00108 Thiolase, N-terminal domain BMQ_2497 PF02803 Thiolase, C-terminal domain BMQ_2499 PF00176 SNF2 family N-terminal domain BMQ_2499 PF00271 Helicase conserved C-terminal domain BMQ_2499 PF04434 SWIM zinc finger BMQ_2501 PF03358 NADPH-dependent FMN reductase BMQ_2502 PF00072 Response regulator receiver domain BMQ_2502 PF00196 Bacterial regulatory proteins, luxR family BMQ_2503 PF07730 Histidine kinase BMQ_2503 PF13185 GAF domain BMQ_2507 PF13536 Putative multidrug resistance efflux transporter BMQ_2509 PF13673 Acetyltransferase (GNAT) domain BMQ_2510 PF00920 Dehydratase family BMQ_2511 PF12146 Serine aminopeptidase, S33 BMQ_2512 PF02833 DHHA2 domain BMQ_2512 PF01368 DHH family BMQ_2513 PF01063 Amino-transferase class IV BMQ_2515 PF01553 Acyltransferase BMQ_2516 PF00860 Permease family BMQ_2517 PF01014 Uricase BMQ_2517 PF09349 OHCU decarboxylase BMQ_2518 PF00576 HIUase/Transthyretin family BMQ_2522 PF01566 Natural resistance-associated macrophage protein BMQ_2526 PF01047 MarR family BMQ_2528 PF02899 Phage integrase, N-terminal SAM-like domain BMQ_2528 PF00589 Phage integrase family BMQ_2531 PF13520 Amino acid permease BMQ_2532 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BMQ_2533 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BMQ_2534 PF06277 Ethanolamine utilisation protein EutA BMQ_2535 PF09515 Thiamine transporter protein (Thia_YuaJ) BMQ_2536 PF00324 Amino acid permease BMQ_2537 PF00583 Acetyltransferase (GNAT) family BMQ_2538 PF00857 Isochorismatase family BMQ_2540 PF08892 YqcI/YcgG family BMQ_2541 PF01810 LysE type translocator BMQ_2542 PF00561 alpha/beta hydrolase fold BMQ_2542 PF08386 TAP-like protein BMQ_2543 PF00521 DNA gyrase/topoisomerase IV, subunit A BMQ_2543 PF03989 DNA gyrase C-terminal domain, beta-propeller BMQ_2544 PF01751 Toprim domain BMQ_2544 PF00204 DNA gyrase B BMQ_2544 PF00986 DNA gyrase B subunit, carboxyl terminus BMQ_2544 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_2545 PF13380 CoA binding domain BMQ_2546 PF02660 Glycerol-3-phosphate acyltransferase BMQ_2548 PF01521 Iron-sulphur cluster biosynthesis BMQ_2549 PF03061 Thioesterase superfamily BMQ_2554 PF08177 Small acid-soluble spore protein N family BMQ_2556 PF00578 AhpC/TSA family BMQ_2557 PF00694 Aconitase C-terminal domain BMQ_2557 PF00330 Aconitase family (aconitate hydratase) BMQ_2559 PF08179 Small acid-soluble spore protein P family BMQ_2560 PF00011 Hsp20/alpha crystallin family BMQ_2561 PF02735 Ku70/Ku80 beta-barrel domain BMQ_2567 PF00111 2Fe-2S iron-sulfur cluster binding domain BMQ_2567 PF01799 [2Fe-2S] binding domain BMQ_2568 PF03450 CO dehydrogenase flavoprotein C-terminal domain BMQ_2568 PF00941 FAD binding domain in molybdopterin dehydrogenase BMQ_2569 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BMQ_2569 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BMQ_2570 PF12804 MobA-like NTP transferase domain BMQ_2571 PF13478 XdhC Rossmann domain BMQ_2571 PF02625 XdhC and CoxI family BMQ_2583 PF01066 CDP-alcohol phosphatidyltransferase BMQ_2585 PF07690 Major Facilitator Superfamily BMQ_2586 PF04463 Protein of unknown function (DUF523) BMQ_2587 PF03780 Asp23 family, cell envelope-related function BMQ_2590 PF03631 Virulence factor BrkB BMQ_2592 PF01235 Sodium:alanine symporter family BMQ_2593 PF07690 Major Facilitator Superfamily BMQ_2594 PF07690 Major Facilitator Superfamily BMQ_2595 PF13411 MerR HTH family regulatory protein BMQ_2597 PF00484 Carbonic anhydrase BMQ_2598 PF01740 STAS domain BMQ_2598 PF00916 Sulfate permease family BMQ_2599 PF00486 Transcriptional regulatory protein, C terminal BMQ_2599 PF00072 Response regulator receiver domain BMQ_2600 PF00512 His Kinase A (phospho-acceptor) domain BMQ_2600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_2600 PF00672 HAMP domain BMQ_2600 PF13426 PAS domain BMQ_2602 PF07690 Major Facilitator Superfamily BMQ_2603 PF09346 SMI1 / KNR4 family (SUKH-1) BMQ_2604 PF13520 Amino acid permease BMQ_2606 PF07454 Stage II sporulation protein P (SpoIIP) BMQ_2607 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BMQ_2607 PF12557 Cob(I)alamin adenosyltransferase N terminal BMQ_2609 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BMQ_2610 PF07685 CobB/CobQ-like glutamine amidotransferase domain BMQ_2610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BMQ_2611 PF11760 Cobalamin synthesis G N-terminal BMQ_2611 PF01890 Cobalamin synthesis G C-terminus BMQ_2611 PF11761 Cobalamin biosynthesis central region BMQ_2612 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BMQ_2613 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BMQ_2614 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BMQ_2615 PF01888 CbiD BMQ_2616 PF02570 Precorrin-8X methylmutase BMQ_2617 PF02571 Precorrin-6x reductase CbiJ/CobK BMQ_2618 PF01903 CbiX BMQ_2619 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BMQ_2619 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BMQ_2622 PF05343 M42 glutamyl aminopeptidase BMQ_2623 PF00375 Sodium:dicarboxylate symporter family BMQ_2624 PF05525 Branched-chain amino acid transport protein BMQ_2628 PF00909 Ammonium Transporter Family BMQ_2630 PF07849 Protein of unknown function (DUF1641) BMQ_2631 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMQ_2632 PF03547 Membrane transport protein BMQ_2633 PF03949 Malic enzyme, NAD binding domain BMQ_2633 PF00390 Malic enzyme, N-terminal domain BMQ_2634 PF01546 Peptidase family M20/M25/M40 BMQ_2635 PF07690 Major Facilitator Superfamily BMQ_2639 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BMQ_2640 PF02441 Flavoprotein BMQ_2641 PF03466 LysR substrate binding domain BMQ_2641 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_2642 PF03547 Membrane transport protein BMQ_2646 PF00296 Luciferase-like monooxygenase BMQ_2647 PF02754 Cysteine-rich domain BMQ_2647 PF13183 4Fe-4S dicluster domain BMQ_2648 PF02913 FAD linked oxidases, C-terminal domain BMQ_2648 PF01565 FAD binding domain BMQ_2649 PF13556 PucR C-terminal helix-turn-helix domain BMQ_2649 PF17853 GGDEF-like domain BMQ_2649 PF05651 Putative sugar diacid recognition BMQ_2650 PF01965 DJ-1/PfpI family BMQ_2653 PF00465 Iron-containing alcohol dehydrogenase BMQ_2656 PF00005 ABC transporter BMQ_2657 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_2657 PF13492 GAF domain BMQ_2657 PF07730 Histidine kinase BMQ_2657 PF13185 GAF domain BMQ_2658 PF00196 Bacterial regulatory proteins, luxR family BMQ_2658 PF00072 Response regulator receiver domain BMQ_2659 PF07687 Peptidase dimerisation domain BMQ_2659 PF01546 Peptidase family M20/M25/M40 BMQ_2665 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase BMQ_2666 PF00296 Luciferase-like monooxygenase BMQ_2668 PF09335 SNARE associated Golgi protein BMQ_2669 PF04493 Endonuclease V BMQ_2670 PF03009 Glycerophosphoryl diester phosphodiesterase family BMQ_2671 PF00583 Acetyltransferase (GNAT) family BMQ_2671 PF00795 Carbon-nitrogen hydrolase BMQ_2672 PF00158 Sigma-54 interaction domain BMQ_2673 PF00795 Carbon-nitrogen hydrolase BMQ_2674 PF00324 Amino acid permease BMQ_2681 PF04740 LXG domain of WXG superfamily BMQ_2681 PF14431 YwqJ-like deaminase BMQ_2681 PF14449 Pre-toxin TG BMQ_2683 PF14449 Pre-toxin TG BMQ_2683 PF04740 LXG domain of WXG superfamily BMQ_2683 PF14431 YwqJ-like deaminase BMQ_2687 PF01554 MatE BMQ_2690 PF01047 MarR family BMQ_2691 PF03372 Endonuclease/Exonuclease/phosphatase family BMQ_2692 PF05139 Erythromycin esterase BMQ_2692 PF00156 Phosphoribosyl transferase domain BMQ_2693 PF03928 Haem-degrading BMQ_2694 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BMQ_2694 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMQ_2695 PF00455 DeoR C terminal sensor domain BMQ_2695 PF08220 DeoR-like helix-turn-helix domain BMQ_2696 PF05816 Toxic anion resistance protein (TelA) BMQ_2697 PF14266 Putative component of 'biosynthetic module' BMQ_2698 PF02342 TerD domain BMQ_2699 PF02342 TerD domain BMQ_2700 PF02342 TerD domain BMQ_2701 PF02872 5'-nucleotidase, C-terminal domain BMQ_2701 PF00149 Calcineurin-like phosphoesterase BMQ_2704 PF12679 ABC-2 family transporter protein BMQ_2705 PF00005 ABC transporter BMQ_2707 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BMQ_2707 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BMQ_2708 PF00313 'Cold-shock' DNA-binding domain BMQ_2709 PF00155 Aminotransferase class I and II BMQ_2709 PF00392 Bacterial regulatory proteins, gntR family BMQ_2710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BMQ_2710 PF00205 Thiamine pyrophosphate enzyme, central domain BMQ_2710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BMQ_2711 PF00313 'Cold-shock' DNA-binding domain BMQ_2718 PF00107 Zinc-binding dehydrogenase BMQ_2718 PF08240 Alcohol dehydrogenase GroES-like domain BMQ_2719 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BMQ_2719 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BMQ_2720 PF00072 Response regulator receiver domain BMQ_2720 PF04397 LytTr DNA-binding domain BMQ_2721 PF04239 Protein of unknown function (DUF421) BMQ_2722 PF07690 Major Facilitator Superfamily BMQ_2723 PF06725 3D domain BMQ_2723 PF01476 LysM domain BMQ_2725 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BMQ_2725 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BMQ_2730 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BMQ_2731 PF01569 PAP2 superfamily BMQ_2732 PF00881 Nitroreductase family BMQ_2736 PF08264 Anticodon-binding domain of tRNA BMQ_2736 PF00133 tRNA synthetases class I (I, L, M and V) BMQ_2739 PF00453 Ribosomal protein L20 BMQ_2740 PF01734 Patatin-like phospholipase BMQ_2745 PF05163 DinB family BMQ_2747 PF06039 Malate:quinone oxidoreductase (Mqo) BMQ_2753 PF02056 Family 4 glycosyl hydrolase BMQ_2753 PF11975 Family 4 glycosyl hydrolase C-terminal domain BMQ_2761 PF02595 Glycerate kinase family BMQ_2762 PF02447 GntP family permease BMQ_2763 PF05651 Putative sugar diacid recognition BMQ_2763 PF17853 GGDEF-like domain BMQ_2763 PF13556 PucR C-terminal helix-turn-helix domain BMQ_2764 PF00465 Iron-containing alcohol dehydrogenase BMQ_2765 PF05656 Protein of unknown function (DUF805) BMQ_2770 PF00497 Bacterial extracellular solute-binding proteins, family 3 BMQ_2771 PF00296 Luciferase-like monooxygenase BMQ_2773 PF05656 Protein of unknown function (DUF805) BMQ_2776 PF02293 AmiS/UreI family transporter BMQ_2777 PF07662 Na+ dependent nucleoside transporter C-terminus BMQ_2777 PF01773 Na+ dependent nucleoside transporter N-terminus BMQ_2778 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BMQ_2779 PF01791 DeoC/LacD family aldolase BMQ_2780 PF02885 Glycosyl transferase family, helical bundle domain BMQ_2780 PF00591 Glycosyl transferase family, a/b domain BMQ_2780 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BMQ_2782 PF04198 Putative sugar-binding domain BMQ_2786 PF01183 Glycosyl hydrolases family 25 BMQ_2789 PF02660 Glycerol-3-phosphate acyltransferase BMQ_2791 PF03551 Transcriptional regulator PadR-like family BMQ_2792 PF01435 Peptidase family M48 BMQ_2793 PF00753 Metallo-beta-lactamase superfamily BMQ_2794 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BMQ_2795 PF01547 Bacterial extracellular solute-binding protein BMQ_2796 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_2797 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_2798 PF00106 short chain dehydrogenase BMQ_2799 PF02667 Short chain fatty acid transporter BMQ_2803 PF09587 Bacterial capsule synthesis protein PGA_cap BMQ_2804 PF04143 Sulphur transport BMQ_2807 PF00465 Iron-containing alcohol dehydrogenase BMQ_2808 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_2808 PF03466 LysR substrate binding domain BMQ_2812 PF07690 Major Facilitator Superfamily BMQ_2819 PF08240 Alcohol dehydrogenase GroES-like domain BMQ_2819 PF00107 Zinc-binding dehydrogenase BMQ_2820 PF07729 FCD domain BMQ_2820 PF00392 Bacterial regulatory proteins, gntR family BMQ_2824 PF00999 Sodium/hydrogen exchanger family BMQ_2825 PF01595 Cyclin M transmembrane N-terminal domain BMQ_2825 PF03471 Transporter associated domain BMQ_2825 PF00571 CBS domain BMQ_2827 PF10011 Predicted membrane protein (DUF2254) BMQ_2830 PF00005 ABC transporter BMQ_2830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMQ_2831 PF00005 ABC transporter BMQ_2832 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_2833 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_2834 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BMQ_2836 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BMQ_2836 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BMQ_2840 PF00565 Staphylococcal nuclease homologue BMQ_2842 PF06039 Malate:quinone oxidoreductase (Mqo) BMQ_2843 PF03618 Kinase/pyrophosphorylase BMQ_2848 PF00924 Mechanosensitive ion channel BMQ_2854 PF02073 Thermophilic metalloprotease (M29) BMQ_2855 PF09339 IclR helix-turn-helix domain BMQ_2855 PF01614 Bacterial transcriptional regulator BMQ_2856 PF01557 Fumarylacetoacetate (FAA) hydrolase family BMQ_2857 PF01274 Malate synthase BMQ_2858 PF02913 FAD linked oxidases, C-terminal domain BMQ_2858 PF01565 FAD binding domain BMQ_2859 PF02754 Cysteine-rich domain BMQ_2859 PF13183 4Fe-4S dicluster domain BMQ_2860 PF02913 FAD linked oxidases, C-terminal domain BMQ_2860 PF01565 FAD binding domain BMQ_2861 PF02652 L-lactate permease BMQ_2863 PF07690 Major Facilitator Superfamily BMQ_2864 PF00795 Carbon-nitrogen hydrolase BMQ_2866 PF00392 Bacterial regulatory proteins, gntR family BMQ_2866 PF07729 FCD domain BMQ_2869 PF10997 Alternate to MurJ BMQ_2870 PF12679 ABC-2 family transporter protein BMQ_2871 PF13732 Domain of unknown function (DUF4162) BMQ_2871 PF00005 ABC transporter BMQ_2872 PF13396 Phospholipase_D-nuclease N-terminal BMQ_2875 PF04542 Sigma-70 region 2 BMQ_2875 PF08281 Sigma-70, region 4 BMQ_2878 PF10676 Spore germination protein gerPA/gerPF BMQ_2880 PF05360 yiaA/B two helix domain BMQ_2882 PF12146 Serine aminopeptidase, S33 BMQ_2883 PF00296 Luciferase-like monooxygenase BMQ_2884 PF01740 STAS domain BMQ_2885 PF01544 CorA-like Mg2+ transporter protein BMQ_2888 PF04239 Protein of unknown function (DUF421) BMQ_2889 PF02557 D-alanyl-D-alanine carboxypeptidase BMQ_2891 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_2891 PF00512 His Kinase A (phospho-acceptor) domain BMQ_2891 PF16736 Single Cache-like BMQ_2891 PF00989 PAS fold BMQ_2892 PF00072 Response regulator receiver domain BMQ_2892 PF00486 Transcriptional regulatory protein, C terminal BMQ_2893 PF01494 FAD binding domain BMQ_2896 PF00364 Biotin-requiring enzyme BMQ_2896 PF02817 e3 binding domain BMQ_2896 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BMQ_2897 PF02779 Transketolase, pyrimidine binding domain BMQ_2897 PF16870 2-oxoglutarate dehydrogenase C-terminal BMQ_2897 PF00676 Dehydrogenase E1 component BMQ_2899 PF07690 Major Facilitator Superfamily BMQ_2900 PF02566 OsmC-like protein BMQ_2902 PF04235 Protein of unknown function (DUF418) BMQ_2909 PF00005 ABC transporter BMQ_2910 PF00005 ABC transporter BMQ_2910 PF12399 Branched-chain amino acid ATP-binding cassette transporter BMQ_2911 PF11862 Domain of unknown function (DUF3382) BMQ_2911 PF02653 Branched-chain amino acid transport system / permease component BMQ_2912 PF02653 Branched-chain amino acid transport system / permease component BMQ_2913 PF13458 Periplasmic binding protein BMQ_2914 PF00543 Nitrogen regulatory protein P-II BMQ_2915 PF00909 Ammonium Transporter Family BMQ_2917 PF03806 AbgT putative transporter family BMQ_2920 PF00561 alpha/beta hydrolase fold BMQ_2923 PF04229 GrpB protein BMQ_2923 PF13673 Acetyltransferase (GNAT) domain BMQ_2925 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BMQ_2925 PF02770 Acyl-CoA dehydrogenase, middle domain BMQ_2925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BMQ_2928 PF10676 Spore germination protein gerPA/gerPF BMQ_2929 PF10676 Spore germination protein gerPA/gerPF BMQ_2933 PF00005 ABC transporter BMQ_2934 PF01032 FecCD transport family BMQ_2935 PF07685 CobB/CobQ-like glutamine amidotransferase domain BMQ_2935 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BMQ_2937 PF13520 Amino acid permease BMQ_2941 PF01380 SIS domain BMQ_2943 PF00356 Bacterial regulatory proteins, lacI family BMQ_2945 PF07690 Major Facilitator Superfamily BMQ_2946 PF00294 pfkB family carbohydrate kinase BMQ_2949 PF01593 Flavin containing amine oxidoreductase BMQ_2950 PF00535 Glycosyl transferase family 2 BMQ_2954 PF13386 Cytochrome C biogenesis protein transmembrane region BMQ_2956 PF01774 UreD urease accessory protein BMQ_2957 PF02492 CobW/HypB/UreG, nucleotide-binding domain BMQ_2958 PF01730 UreF BMQ_2959 PF05194 UreE urease accessory protein, C-terminal domain BMQ_2959 PF02814 UreE urease accessory protein, N-terminal domain BMQ_2960 PF01979 Amidohydrolase family BMQ_2960 PF00449 Urease alpha-subunit, N-terminal domain BMQ_2961 PF00699 Urease beta subunit BMQ_2962 PF00547 Urease, gamma subunit BMQ_2963 PF00591 Glycosyl transferase family, a/b domain BMQ_2963 PF02885 Glycosyl transferase family, helical bundle domain BMQ_2964 PF01476 LysM domain BMQ_2964 PF00877 NlpC/P60 family BMQ_2965 PF01476 LysM domain BMQ_2965 PF06725 3D domain BMQ_2966 PF00881 Nitroreductase family BMQ_2967 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BMQ_2968 PF09335 SNARE associated Golgi protein BMQ_2970 PF01738 Dienelactone hydrolase family BMQ_2971 PF00905 Penicillin binding protein transpeptidase domain BMQ_2971 PF00912 Transglycosylase BMQ_2972 PF01943 Polysaccharide biosynthesis protein BMQ_2973 PF00892 EamA-like transporter family BMQ_2974 PF00392 Bacterial regulatory proteins, gntR family BMQ_2974 PF00155 Aminotransferase class I and II BMQ_2979 PF00664 ABC transporter transmembrane region BMQ_2979 PF00005 ABC transporter BMQ_2984 PF05908 Poly-gamma-glutamate hydrolase BMQ_2988 PF00210 Ferritin-like domain BMQ_2990 PF07875 Coat F domain BMQ_2991 PF01595 Cyclin M transmembrane N-terminal domain BMQ_2991 PF03471 Transporter associated domain BMQ_2991 PF00571 CBS domain BMQ_2993 PF00571 CBS domain BMQ_2993 PF00478 IMP dehydrogenase / GMP reductase domain BMQ_2995 PF10503 Esterase PHB depolymerase BMQ_2996 PF01266 FAD dependent oxidoreductase BMQ_2996 PF00355 Rieske [2Fe-2S] domain BMQ_2998 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BMQ_2999 PF02153 Prephenate dehydrogenase BMQ_2999 PF01842 ACT domain BMQ_3000 PF01264 Chorismate synthase BMQ_3001 PF00793 DAHP synthetase I family BMQ_3001 PF01817 Chorismate mutase type II BMQ_3003 PF02417 Chromate transporter BMQ_3004 PF02417 Chromate transporter BMQ_3006 PF00266 Aminotransferase class-V BMQ_3007 PF01546 Peptidase family M20/M25/M40 BMQ_3008 PF07905 Purine catabolism regulatory protein-like family BMQ_3008 PF13556 PucR C-terminal helix-turn-helix domain BMQ_3008 PF17853 GGDEF-like domain BMQ_3009 PF01910 Thiamine-binding protein BMQ_3010 PF00877 NlpC/P60 family BMQ_3010 PF01476 LysM domain BMQ_3011 PF06628 Catalase-related immune-responsive BMQ_3011 PF00199 Catalase BMQ_3013 PF00209 Sodium:neurotransmitter symporter family BMQ_3021 PF01925 Sulfite exporter TauE/SafE BMQ_3022 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BMQ_3023 PF10502 Signal peptidase, peptidase S26 BMQ_3025 PF02702 Osmosensitive K+ channel His kinase sensor domain BMQ_3026 PF02669 K+-transporting ATPase, c chain BMQ_3028 PF03814 Potassium-transporting ATPase A subunit BMQ_3029 PF04101 Glycosyltransferase family 28 C-terminal domain BMQ_3029 PF03033 Glycosyltransferase family 28 N-terminal domain BMQ_3031 PF01022 Bacterial regulatory protein, arsR family BMQ_3033 PF00881 Nitroreductase family BMQ_3036 PF04229 GrpB protein BMQ_3037 PF01520 N-acetylmuramoyl-L-alanine amidase BMQ_3037 PF08239 Bacterial SH3 domain BMQ_3038 PF00253 Ribosomal protein S14p/S29e BMQ_3039 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BMQ_3039 PF18277 AbrB C-terminal domain BMQ_3040 PF05163 DinB family BMQ_3041 PF01938 TRAM domain BMQ_3041 PF05958 tRNA (Uracil-5-)-methyltransferase BMQ_3044 PF02277 Phosphoribosyltransferase BMQ_3045 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BMQ_3045 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BMQ_3048 PF07690 Major Facilitator Superfamily BMQ_3049 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BMQ_3049 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BMQ_3050 PF00781 Diacylglycerol kinase catalytic domain BMQ_3052 PF00285 Citrate synthase, C-terminal domain BMQ_3054 PF03466 LysR substrate binding domain BMQ_3054 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_3055 PF00892 EamA-like transporter family BMQ_3056 PF00155 Aminotransferase class I and II BMQ_3056 PF00392 Bacterial regulatory proteins, gntR family BMQ_3060 PF13426 PAS domain BMQ_3060 PF01740 STAS domain BMQ_3061 PF01740 STAS domain BMQ_3067 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BMQ_3067 PF01740 STAS domain BMQ_3068 PF04226 Transglycosylase associated protein BMQ_3071 PF00574 Clp protease BMQ_3074 PF10415 Fumarase C C-terminus BMQ_3074 PF00206 Lyase BMQ_3075 PF17763 Glutaminase/Asparaginase C-terminal domain BMQ_3075 PF00710 Asparaginase, N-terminal BMQ_3076 PF01381 Helix-turn-helix BMQ_3084 PF13520 Amino acid permease BMQ_3085 PF02082 Transcriptional regulator BMQ_3090 PF00390 Malic enzyme, N-terminal domain BMQ_3090 PF03949 Malic enzyme, NAD binding domain BMQ_3091 PF02522 Aminoglycoside 3-N-acetyltransferase BMQ_3093 PF13302 Acetyltransferase (GNAT) domain BMQ_3096 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BMQ_3096 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BMQ_3097 PF00667 FAD binding domain BMQ_3097 PF00258 Flavodoxin BMQ_3097 PF00175 Oxidoreductase NAD-binding domain BMQ_3100 PF07690 Major Facilitator Superfamily BMQ_3101 PF01047 MarR family BMQ_3102 PF07739 TipAS antibiotic-recognition domain BMQ_3102 PF13411 MerR HTH family regulatory protein BMQ_3103 PF13302 Acetyltransferase (GNAT) domain BMQ_3110 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BMQ_3113 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BMQ_3115 PF00873 AcrB/AcrD/AcrF family BMQ_3117 PF00440 Bacterial regulatory proteins, tetR family BMQ_3118 PF12823 Domain of unknown function (DUF3817) BMQ_3120 PF01979 Amidohydrolase family BMQ_3122 PF03816 Cell envelope-related transcriptional attenuator domain BMQ_3123 PF13302 Acetyltransferase (GNAT) domain BMQ_3125 PF02673 Bacitracin resistance protein BacA BMQ_3127 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BMQ_3128 PF00510 Cytochrome c oxidase subunit III BMQ_3129 PF00115 Cytochrome C and Quinol oxidase polypeptide I BMQ_3130 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BMQ_3136 PF01022 Bacterial regulatory protein, arsR family BMQ_3137 PF00403 Heavy-metal-associated domain BMQ_3138 PF08241 Methyltransferase domain BMQ_3141 PF01520 N-acetylmuramoyl-L-alanine amidase BMQ_3141 PF05036 Sporulation related domain BMQ_3143 PF01810 LysE type translocator BMQ_3145 PF13520 Amino acid permease BMQ_3150 PF04203 Sortase domain BMQ_3151 PF01925 Sulfite exporter TauE/SafE BMQ_3152 PF13302 Acetyltransferase (GNAT) domain BMQ_3153 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BMQ_3155 PF16884 N-terminal domain of oxidoreductase BMQ_3155 PF00107 Zinc-binding dehydrogenase BMQ_3161 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BMQ_3161 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BMQ_3165 PF02600 Disulfide bond formation protein DsbB BMQ_3166 PF13462 Thioredoxin BMQ_3167 PF01435 Peptidase family M48 BMQ_3175 PF00475 Imidazoleglycerol-phosphate dehydratase BMQ_3175 PF08645 Polynucleotide kinase 3 phosphatase BMQ_3178 PF00893 Small Multidrug Resistance protein BMQ_3179 PF16658 Class II release factor RF3, C-terminal domain BMQ_3179 PF00009 Elongation factor Tu GTP binding domain BMQ_3179 PF03144 Elongation factor Tu domain 2 BMQ_3180 PF00313 'Cold-shock' DNA-binding domain BMQ_3181 PF04239 Protein of unknown function (DUF421) BMQ_3184 PF13460 NAD(P)H-binding BMQ_3190 PF05067 Manganese containing catalase BMQ_3191 PF01497 Periplasmic binding protein BMQ_3192 PF00005 ABC transporter BMQ_3193 PF01032 FecCD transport family BMQ_3194 PF01032 FecCD transport family BMQ_3195 PF07486 Cell Wall Hydrolase BMQ_3199 PF08240 Alcohol dehydrogenase GroES-like domain BMQ_3199 PF00107 Zinc-binding dehydrogenase BMQ_3200 PF00107 Zinc-binding dehydrogenase BMQ_3200 PF08240 Alcohol dehydrogenase GroES-like domain BMQ_3201 PF03611 PTS system sugar-specific permease component BMQ_3202 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BMQ_3203 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BMQ_3206 PF02525 Flavodoxin-like fold BMQ_3207 PF10502 Signal peptidase, peptidase S26 BMQ_3211 PF08220 DeoR-like helix-turn-helix domain BMQ_3211 PF00455 DeoR C terminal sensor domain BMQ_3212 PF00266 Aminotransferase class-V BMQ_3213 PF13419 Haloacid dehalogenase-like hydrolase BMQ_3214 PF01713 Smr domain BMQ_3214 PF00488 MutS domain V BMQ_3216 PF03591 AzlC protein BMQ_3217 PF07883 Cupin domain BMQ_3217 PF01381 Helix-turn-helix BMQ_3218 PF03741 Integral membrane protein TerC family BMQ_3219 PF13407 Periplasmic binding protein domain BMQ_3219 PF00356 Bacterial regulatory proteins, lacI family BMQ_3220 PF02082 Transcriptional regulator BMQ_3224 PF00741 Gas vesicle protein BMQ_3229 PF00741 Gas vesicle protein BMQ_3230 PF05121 Gas vesicle protein K BMQ_3230 PF00741 Gas vesicle protein BMQ_3231 PF00741 Gas vesicle protein BMQ_3234 PF07486 Cell Wall Hydrolase BMQ_3235 PF01872 RibD C-terminal domain BMQ_3237 PF00667 FAD binding domain BMQ_3237 PF00258 Flavodoxin BMQ_3237 PF00175 Oxidoreductase NAD-binding domain BMQ_3237 PF00067 Cytochrome P450 BMQ_3238 PF00440 Bacterial regulatory proteins, tetR family BMQ_3238 PF16295 Tetracyclin repressor-like, C-terminal domain BMQ_3240 PF05067 Manganese containing catalase BMQ_3241 PF12652 CotJB protein BMQ_3242 PF11007 Spore coat associated protein JA (CotJA) BMQ_3245 PF01810 LysE type translocator BMQ_3246 PF02311 AraC-like ligand binding domain BMQ_3246 PF12833 Helix-turn-helix domain BMQ_3247 PF07730 Histidine kinase BMQ_3247 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_3247 PF13492 GAF domain BMQ_3248 PF00196 Bacterial regulatory proteins, luxR family BMQ_3248 PF00072 Response regulator receiver domain BMQ_3249 PF03009 Glycerophosphoryl diester phosphodiesterase family BMQ_3252 PF14040 Deoxyribonuclease NucA/NucB BMQ_3256 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BMQ_3256 PF03033 Glycosyltransferase family 28 N-terminal domain BMQ_3257 PF00583 Acetyltransferase (GNAT) family BMQ_3259 PF00923 Transaldolase/Fructose-6-phosphate aldolase BMQ_3260 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BMQ_3260 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BMQ_3261 PF02780 Transketolase, C-terminal domain BMQ_3261 PF00456 Transketolase, thiamine diphosphate binding domain BMQ_3261 PF02779 Transketolase, pyrimidine binding domain BMQ_3262 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BMQ_3262 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BMQ_3266 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BMQ_3267 PF01202 Shikimate kinase BMQ_3270 PF00005 ABC transporter BMQ_3271 PF02687 FtsX-like permease family BMQ_3272 PF00512 His Kinase A (phospho-acceptor) domain BMQ_3272 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_3272 PF00672 HAMP domain BMQ_3273 PF00072 Response regulator receiver domain BMQ_3273 PF00486 Transcriptional regulatory protein, C terminal BMQ_3274 PF02567 Phenazine biosynthesis-like protein BMQ_3277 PF00989 PAS fold BMQ_3277 PF00512 His Kinase A (phospho-acceptor) domain BMQ_3277 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_3277 PF13426 PAS domain BMQ_3277 PF13188 PAS domain BMQ_3278 PF13302 Acetyltransferase (GNAT) domain BMQ_3279 PF01266 FAD dependent oxidoreductase BMQ_3285 PF00248 Aldo/keto reductase family BMQ_3288 PF00892 EamA-like transporter family BMQ_3289 PF12833 Helix-turn-helix domain BMQ_3289 PF02311 AraC-like ligand binding domain BMQ_3292 PF00741 Gas vesicle protein BMQ_3293 PF05121 Gas vesicle protein K BMQ_3293 PF00741 Gas vesicle protein BMQ_3294 PF00741 Gas vesicle protein BMQ_3298 PF07728 AAA domain (dynein-related subfamily) BMQ_3300 PF00741 Gas vesicle protein BMQ_3303 PF00741 Gas vesicle protein BMQ_3304 PF09557 Domain of unknown function (DUF2382) BMQ_3304 PF11181 Heat induced stress protein YflT BMQ_3306 PF00375 Sodium:dicarboxylate symporter family BMQ_3307 PF08274 PhnA Zinc-Ribbon BMQ_3307 PF03831 PhnA domain BMQ_3314 PF13026 Protein of unknown function (DUF3887) BMQ_3314 PF12146 Serine aminopeptidase, S33 BMQ_3316 PF01571 Aminomethyltransferase folate-binding domain BMQ_3316 PF17806 Sarcosine oxidase A3 domain BMQ_3316 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMQ_3316 PF08669 Glycine cleavage T-protein C-terminal barrel domain BMQ_3317 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_3318 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BMQ_3319 PF00005 ABC transporter BMQ_3320 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BMQ_3321 PF07690 Major Facilitator Superfamily BMQ_3322 PF13302 Acetyltransferase (GNAT) domain BMQ_3324 PF07687 Peptidase dimerisation domain BMQ_3324 PF01546 Peptidase family M20/M25/M40 BMQ_3325 PF00296 Luciferase-like monooxygenase BMQ_3326 PF00296 Luciferase-like monooxygenase BMQ_3327 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BMQ_3327 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BMQ_3327 PF02770 Acyl-CoA dehydrogenase, middle domain BMQ_3328 PF00107 Zinc-binding dehydrogenase BMQ_3328 PF08240 Alcohol dehydrogenase GroES-like domain BMQ_3329 PF00072 Response regulator receiver domain BMQ_3329 PF00486 Transcriptional regulatory protein, C terminal BMQ_3330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_3331 PF00005 ABC transporter BMQ_3332 PF02687 FtsX-like permease family BMQ_3334 PF01738 Dienelactone hydrolase family BMQ_3335 PF00155 Aminotransferase class I and II BMQ_3337 PF01925 Sulfite exporter TauE/SafE BMQ_3338 PF01206 Sulfurtransferase TusA BMQ_3339 PF00753 Metallo-beta-lactamase superfamily BMQ_3339 PF00581 Rhodanese-like domain BMQ_3340 PF01206 Sulfurtransferase TusA BMQ_3340 PF00581 Rhodanese-like domain BMQ_3343 PF13686 DsrE/DsrF/DrsH-like family BMQ_3344 PF01206 Sulfurtransferase TusA BMQ_3345 PF02583 Metal-sensitive transcriptional repressor BMQ_3349 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_3349 PF03466 LysR substrate binding domain BMQ_3352 PF07702 UTRA domain BMQ_3352 PF00392 Bacterial regulatory proteins, gntR family BMQ_3353 PF02378 Phosphotransferase system, EIIC BMQ_3353 PF00367 phosphotransferase system, EIIB BMQ_3353 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BMQ_3354 PF00232 Glycosyl hydrolase family 1 BMQ_3356 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BMQ_3357 PF05901 Excalibur calcium-binding domain BMQ_3360 PF01810 LysE type translocator BMQ_3363 PF03466 LysR substrate binding domain BMQ_3363 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_3364 PF07690 Major Facilitator Superfamily BMQ_3365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BMQ_3367 PF00232 Glycosyl hydrolase family 1 BMQ_3368 PF12706 Beta-lactamase superfamily domain BMQ_3370 PF13170 Protein of unknown function (DUF4003) BMQ_3372 PF00881 Nitroreductase family BMQ_3373 PF00171 Aldehyde dehydrogenase family BMQ_3377 PF04011 LemA family BMQ_3379 PF01638 HxlR-like helix-turn-helix BMQ_3380 PF02525 Flavodoxin-like fold BMQ_3381 PF02525 Flavodoxin-like fold BMQ_3382 PF13302 Acetyltransferase (GNAT) domain BMQ_3385 PF00264 Common central domain of tyrosinase BMQ_3387 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BMQ_3388 PF04299 Putative FMN-binding domain BMQ_3391 PF00561 alpha/beta hydrolase fold BMQ_3394 PF07308 Protein of unknown function (DUF1456) BMQ_3396 PF06874 Firmicute fructose-1,6-bisphosphatase BMQ_3398 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BMQ_3398 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BMQ_3399 PF00313 'Cold-shock' DNA-binding domain BMQ_3401 PF00313 'Cold-shock' DNA-binding domain BMQ_3402 PF07690 Major Facilitator Superfamily BMQ_3403 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BMQ_3404 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_3405 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_3405 PF12911 N-terminal TM domain of oligopeptide transport permease C BMQ_3406 PF00005 ABC transporter BMQ_3406 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMQ_3407 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMQ_3407 PF00005 ABC transporter BMQ_3408 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BMQ_3409 PF00291 Pyridoxal-phosphate dependent enzyme BMQ_3410 PF00375 Sodium:dicarboxylate symporter family BMQ_3413 PF07690 Major Facilitator Superfamily BMQ_3422 PF02126 Phosphotriesterase family BMQ_3423 PF01497 Periplasmic binding protein BMQ_3425 PF01740 STAS domain BMQ_3425 PF00916 Sulfate permease family BMQ_3429 PF01969 Protein of unknown function DUF111 BMQ_3430 PF00731 AIR carboxylase BMQ_3431 PF02540 NAD synthase BMQ_3432 PF00106 short chain dehydrogenase BMQ_3434 PF02614 Glucuronate isomerase BMQ_3435 PF00480 ROK family BMQ_3439 PF00005 ABC transporter BMQ_3450 PF05139 Erythromycin esterase BMQ_3453 PF03992 Antibiotic biosynthesis monooxygenase BMQ_3454 PF00561 alpha/beta hydrolase fold BMQ_3456 PF11188 Protein of unknown function (DUF2975) BMQ_3457 PF11188 Protein of unknown function (DUF2975) BMQ_3458 PF13443 Cro/C1-type HTH DNA-binding domain BMQ_3460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_3460 PF03466 LysR substrate binding domain BMQ_3464 PF00356 Bacterial regulatory proteins, lacI family BMQ_3465 PF01261 Xylose isomerase-like TIM barrel BMQ_3466 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMQ_3466 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BMQ_3468 PF00171 Aldehyde dehydrogenase family BMQ_3469 PF00294 pfkB family carbohydrate kinase BMQ_3470 PF04962 KduI/IolB family BMQ_3471 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BMQ_3471 PF00205 Thiamine pyrophosphate enzyme, central domain BMQ_3471 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BMQ_3472 PF00455 DeoR C terminal sensor domain BMQ_3472 PF08220 DeoR-like helix-turn-helix domain BMQ_3474 PF01116 Fructose-bisphosphate aldolase class-II BMQ_3475 PF01261 Xylose isomerase-like TIM barrel BMQ_3476 PF00083 Sugar (and other) transporter BMQ_3477 PF01261 Xylose isomerase-like TIM barrel BMQ_3479 PF08240 Alcohol dehydrogenase GroES-like domain BMQ_3479 PF00107 Zinc-binding dehydrogenase BMQ_3480 PF13411 MerR HTH family regulatory protein BMQ_3483 PF07883 Cupin domain BMQ_3487 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BMQ_3487 PF01740 STAS domain BMQ_3488 PF00313 'Cold-shock' DNA-binding domain BMQ_3490 PF02557 D-alanyl-D-alanine carboxypeptidase BMQ_3495 PF01544 CorA-like Mg2+ transporter protein BMQ_3496 PF01740 STAS domain BMQ_3506 PF08713 DNA alkylation repair enzyme BMQ_3507 PF00583 Acetyltransferase (GNAT) family BMQ_3511 PF07690 Major Facilitator Superfamily BMQ_3512 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BMQ_3512 PF00391 PEP-utilising enzyme, mobile domain BMQ_3513 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BMQ_3513 PF00391 PEP-utilising enzyme, mobile domain BMQ_3515 PF00392 Bacterial regulatory proteins, gntR family BMQ_3515 PF07729 FCD domain BMQ_3519 PF06912 Protein of unknown function (DUF1275) BMQ_3521 PF00455 DeoR C terminal sensor domain BMQ_3521 PF08220 DeoR-like helix-turn-helix domain BMQ_3524 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BMQ_3524 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BMQ_3529 PF01810 LysE type translocator BMQ_3536 PF01717 Cobalamin-independent synthase, Catalytic domain BMQ_3536 PF08267 Cobalamin-independent synthase, N-terminal domain BMQ_3539 PF00083 Sugar (and other) transporter BMQ_3540 PF11762 L-arabinose isomerase C-terminal domain BMQ_3540 PF02610 L-arabinose isomerase BMQ_3541 PF00596 Class II Aldolase and Adducin N-terminal domain BMQ_3542 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BMQ_3542 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BMQ_3543 PF00392 Bacterial regulatory proteins, gntR family BMQ_3544 PF01966 HD domain BMQ_3548 PF07664 Ferrous iron transport protein B C terminus BMQ_3548 PF02421 Ferrous iron transport protein B BMQ_3548 PF17910 FeoB cytosolic helical domain BMQ_3548 PF07670 Nucleoside recognition BMQ_3549 PF02421 Ferrous iron transport protein B BMQ_3549 PF17910 FeoB cytosolic helical domain BMQ_3549 PF07670 Nucleoside recognition BMQ_3549 PF07664 Ferrous iron transport protein B C terminus BMQ_3550 PF04023 FeoA domain BMQ_3550 PF07664 Ferrous iron transport protein B C terminus BMQ_3550 PF07670 Nucleoside recognition BMQ_3550 PF02421 Ferrous iron transport protein B BMQ_3550 PF17910 FeoB cytosolic helical domain BMQ_3553 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BMQ_3554 PF13115 YtkA-like BMQ_3556 PF01047 MarR family BMQ_3563 PF00892 EamA-like transporter family BMQ_3564 PF01476 LysM domain BMQ_3564 PF00877 NlpC/P60 family BMQ_3565 PF03473 MOSC domain BMQ_3565 PF03475 3-alpha domain BMQ_3566 PF01773 Na+ dependent nucleoside transporter N-terminus BMQ_3566 PF07662 Na+ dependent nucleoside transporter C-terminus BMQ_3575 PF02899 Phage integrase, N-terminal SAM-like domain BMQ_3575 PF00589 Phage integrase family BMQ_3577 PF08141 Small acid-soluble spore protein H family BMQ_3580 PF00440 Bacterial regulatory proteins, tetR family BMQ_3581 PF00266 Aminotransferase class-V BMQ_3582 PF00324 Amino acid permease BMQ_3583 PF03301 Tryptophan 2,3-dioxygenase BMQ_3584 PF04199 Putative cyclase BMQ_3585 PF01361 Tautomerase enzyme BMQ_3587 PF07836 DmpG-like communication domain BMQ_3587 PF00682 HMGL-like BMQ_3588 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation BMQ_3588 PF01118 Semialdehyde dehydrogenase, NAD binding domain BMQ_3589 PF01557 Fumarylacetoacetate (FAA) hydrolase family BMQ_3590 PF00171 Aldehyde dehydrogenase family BMQ_3591 PF01042 Endoribonuclease L-PSP BMQ_3593 PF06052 3-hydroxyanthranilic acid dioxygenase BMQ_3594 PF03358 NADPH-dependent FMN reductase BMQ_3595 PF06574 FAD synthetase BMQ_3596 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal BMQ_3596 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal BMQ_3600 PF13411 MerR HTH family regulatory protein BMQ_3608 PF08818 Domain of unknown function (DU1801) BMQ_3609 PF08818 Domain of unknown function (DU1801) BMQ_3610 PF12323 Helix-turn-helix domain BMQ_3610 PF07282 Putative transposase DNA-binding domain BMQ_3610 PF01385 Probable transposase BMQ_3611 PF08818 Domain of unknown function (DU1801) BMQ_3615 PF07690 Major Facilitator Superfamily BMQ_3619 PF01209 ubiE/COQ5 methyltransferase family BMQ_3621 PF03473 MOSC domain BMQ_3621 PF03475 3-alpha domain BMQ_3622 PF01042 Endoribonuclease L-PSP BMQ_3623 PF00561 alpha/beta hydrolase fold BMQ_3624 PF06779 Uncharacterised MFS-type transporter YbfB BMQ_3625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_3625 PF03466 LysR substrate binding domain BMQ_3626 PF03060 Nitronate monooxygenase BMQ_3627 PF01177 Asp/Glu/Hydantoin racemase BMQ_3629 PF03734 L,D-transpeptidase catalytic domain BMQ_3631 PF07690 Major Facilitator Superfamily BMQ_3632 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BMQ_3632 PF13378 Enolase C-terminal domain-like BMQ_3634 PF00294 pfkB family carbohydrate kinase BMQ_3635 PF09339 IclR helix-turn-helix domain BMQ_3635 PF01614 Bacterial transcriptional regulator BMQ_3636 PF01381 Helix-turn-helix BMQ_3638 PF01061 ABC-2 type transporter BMQ_3639 PF00005 ABC transporter BMQ_3639 PF13732 Domain of unknown function (DUF4162) BMQ_3643 PF00171 Aldehyde dehydrogenase family BMQ_3646 PF01055 Glycosyl hydrolases family 31 BMQ_3648 PF00923 Transaldolase/Fructose-6-phosphate aldolase BMQ_3650 PF00106 short chain dehydrogenase BMQ_3651 PF08240 Alcohol dehydrogenase GroES-like domain BMQ_3651 PF00107 Zinc-binding dehydrogenase BMQ_3652 PF00106 short chain dehydrogenase BMQ_3654 PF00364 Biotin-requiring enzyme BMQ_3654 PF00561 alpha/beta hydrolase fold BMQ_3655 PF00440 Bacterial regulatory proteins, tetR family BMQ_3656 PF01638 HxlR-like helix-turn-helix BMQ_3657 PF02525 Flavodoxin-like fold BMQ_3658 PF00027 Cyclic nucleotide-binding domain BMQ_3659 PF01209 ubiE/COQ5 methyltransferase family BMQ_3662 PF14552 Tautomerase enzyme BMQ_3663 PF03466 LysR substrate binding domain BMQ_3663 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_3665 PF01037 Lrp/AsnC ligand binding domain BMQ_3666 PF00561 alpha/beta hydrolase fold BMQ_3667 PF00561 alpha/beta hydrolase fold BMQ_3669 PF00857 Isochorismatase family BMQ_3670 PF03358 NADPH-dependent FMN reductase BMQ_3671 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BMQ_3672 PF07681 DoxX BMQ_3673 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BMQ_3673 PF00056 lactate/malate dehydrogenase, NAD binding domain BMQ_3675 PF03319 Ethanolamine utilisation protein EutN/carboxysome BMQ_3677 PF06130 Phosphate propanoyltransferase BMQ_3678 PF00936 BMC domain BMQ_3679 PF00465 Iron-containing alcohol dehydrogenase BMQ_3679 PF00171 Aldehyde dehydrogenase family BMQ_3680 PF00936 BMC domain BMQ_3681 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BMQ_3682 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BMQ_3683 PF06277 Ethanolamine utilisation protein EutA BMQ_3684 PF10662 Ethanolamine utilisation - propanediol utilisation BMQ_3685 PF00936 BMC domain BMQ_3686 PF04346 Ethanolamine utilisation protein, EutH BMQ_3687 PF03861 ANTAR domain BMQ_3687 PF00072 Response regulator receiver domain BMQ_3688 PF07568 Histidine kinase BMQ_3688 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_3688 PF12282 Signal transduction histidine kinase BMQ_3693 PF00440 Bacterial regulatory proteins, tetR family BMQ_3694 PF00893 Small Multidrug Resistance protein BMQ_3695 PF17314 Family of unknown function (DUF5360) BMQ_3696 PF07690 Major Facilitator Superfamily BMQ_3697 PF00356 Bacterial regulatory proteins, lacI family BMQ_3698 PF00701 Dihydrodipicolinate synthetase family BMQ_3700 PF03466 LysR substrate binding domain BMQ_3700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_3702 PF03737 Aldolase/RraA BMQ_3704 PF03600 Citrate transporter BMQ_3706 PF07690 Major Facilitator Superfamily BMQ_3708 PF07690 Major Facilitator Superfamily BMQ_3709 PF00440 Bacterial regulatory proteins, tetR family BMQ_3714 PF05163 DinB family BMQ_3715 PF00155 Aminotransferase class I and II BMQ_3716 PF00561 alpha/beta hydrolase fold BMQ_3717 PF13649 Methyltransferase domain BMQ_3720 PF11495 Archaeal transcriptional regulator TrmB BMQ_3720 PF01978 Sugar-specific transcriptional regulator TrmB BMQ_3721 PF00892 EamA-like transporter family BMQ_3722 PF00465 Iron-containing alcohol dehydrogenase BMQ_3723 PF03466 LysR substrate binding domain BMQ_3723 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_3731 PF02517 CPBP intramembrane metalloprotease BMQ_3736 PF17763 Glutaminase/Asparaginase C-terminal domain BMQ_3736 PF00710 Asparaginase, N-terminal BMQ_3741 PF03551 Transcriptional regulator PadR-like family BMQ_3743 PF03466 LysR substrate binding domain BMQ_3743 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_3745 PF07690 Major Facilitator Superfamily BMQ_3746 PF11181 Heat induced stress protein YflT BMQ_3746 PF09557 Domain of unknown function (DUF2382) BMQ_3747 PF10710 Protein of unknown function (DUF2512) BMQ_3748 PF03949 Malic enzyme, NAD binding domain BMQ_3748 PF00390 Malic enzyme, N-terminal domain BMQ_3759 PF00269 Small, acid-soluble spore proteins, alpha/beta type BMQ_3761 PF01674 Lipase (class 2) BMQ_3765 PF00269 Small, acid-soluble spore proteins, alpha/beta type BMQ_3766 PF11553 Protein of unknown function (DUF3231) BMQ_3770 PF12867 DinB superfamily BMQ_3773 PF06803 Protein of unknown function (DUF1232) BMQ_3775 PF06445 GyrI-like small molecule binding domain BMQ_3775 PF12833 Helix-turn-helix domain BMQ_3778 PF00805 Pentapeptide repeats (8 copies) BMQ_3780 PF02525 Flavodoxin-like fold BMQ_3781 PF01638 HxlR-like helix-turn-helix BMQ_3787 PF00994 Probable molybdopterin binding domain BMQ_3787 PF03454 MoeA C-terminal region (domain IV) BMQ_3787 PF03453 MoeA N-terminal region (domain I and II) BMQ_3788 PF01967 MoaC family BMQ_3789 PF00994 Probable molybdopterin binding domain BMQ_3790 PF00174 Oxidoreductase molybdopterin binding domain BMQ_3795 PF14172 Domain of unknown function (DUF4309) BMQ_3798 PF04303 PrpF protein BMQ_3799 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_3799 PF03466 LysR substrate binding domain BMQ_3800 PF03600 Citrate transporter BMQ_3805 PF01027 Inhibitor of apoptosis-promoting Bax1 BMQ_3806 PF00574 Clp protease BMQ_3809 PF00877 NlpC/P60 family BMQ_3810 PF07690 Major Facilitator Superfamily BMQ_3811 PF01047 MarR family BMQ_3813 PF08281 Sigma-70, region 4 BMQ_3813 PF04542 Sigma-70 region 2 BMQ_3815 PF00313 'Cold-shock' DNA-binding domain BMQ_3819 PF00324 Amino acid permease BMQ_3820 PF00324 Amino acid permease BMQ_3821 PF00171 Aldehyde dehydrogenase family BMQ_3822 PF01619 Proline dehydrogenase BMQ_3823 PF09234 Domain of unknown function (DUF1963) BMQ_3827 PF07454 Stage II sporulation protein P (SpoIIP) BMQ_3829 PF00990 Diguanylate cyclase, GGDEF domain BMQ_3829 PF00563 EAL domain BMQ_3829 PF03707 Bacterial signalling protein N terminal repeat BMQ_3831 PF01522 Polysaccharide deacetylase BMQ_3833 PF00535 Glycosyl transferase family 2 BMQ_3834 PF00210 Ferritin-like domain BMQ_3839 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BMQ_3840 PF10057 Uncharacterized conserved protein (DUF2294) BMQ_3841 PF06146 Phosphate-starvation-inducible E BMQ_3842 PF01048 Phosphorylase superfamily BMQ_3843 PF00248 Aldo/keto reductase family BMQ_3848 PF00583 Acetyltransferase (GNAT) family BMQ_3852 PF13411 MerR HTH family regulatory protein BMQ_3853 PF00248 Aldo/keto reductase family BMQ_3855 PF13411 MerR HTH family regulatory protein BMQ_3860 PF08244 Glycosyl hydrolases family 32 C terminal BMQ_3860 PF00251 Glycosyl hydrolases family 32 N-terminal domain BMQ_3861 PF12732 YtxH-like protein BMQ_3866 PF01734 Patatin-like phospholipase BMQ_3867 PF02687 FtsX-like permease family BMQ_3868 PF00005 ABC transporter BMQ_3870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_3871 PF00486 Transcriptional regulatory protein, C terminal BMQ_3871 PF00072 Response regulator receiver domain BMQ_3874 PF02583 Metal-sensitive transcriptional repressor BMQ_3875 PF14040 Deoxyribonuclease NucA/NucB BMQ_3876 PF11033 Competence protein J (ComJ) BMQ_3877 PF13538 UvrD-like helicase C-terminal domain BMQ_3878 PF00378 Enoyl-CoA hydratase/isomerase BMQ_3879 PF01638 HxlR-like helix-turn-helix BMQ_3882 PF00067 Cytochrome P450 BMQ_3883 PF07681 DoxX BMQ_3884 PF00535 Glycosyl transferase family 2 BMQ_3885 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BMQ_3885 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BMQ_3885 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BMQ_3886 PF00535 Glycosyl transferase family 2 BMQ_3889 PF00877 NlpC/P60 family BMQ_3889 PF01476 LysM domain BMQ_3890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BMQ_3891 PF01047 MarR family BMQ_3892 PF13739 Deacetylase PdaC BMQ_3892 PF11738 Protein of unknown function (DUF3298) BMQ_3893 PF08281 Sigma-70, region 4 BMQ_3893 PF04542 Sigma-70 region 2 BMQ_3894 PF01522 Polysaccharide deacetylase BMQ_3894 PF13739 Deacetylase PdaC BMQ_3894 PF11738 Protein of unknown function (DUF3298) BMQ_3895 PF03845 Spore germination protein BMQ_3898 PF00324 Amino acid permease BMQ_3899 PF00491 Arginase family BMQ_3903 PF02386 Cation transport protein BMQ_3904 PF02080 TrkA-C domain BMQ_3904 PF02254 TrkA-N domain BMQ_3906 PF01037 Lrp/AsnC ligand binding domain BMQ_3909 PF13180 PDZ domain BMQ_3910 PF00072 Response regulator receiver domain BMQ_3910 PF00486 Transcriptional regulatory protein, C terminal BMQ_3911 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_3911 PF00512 His Kinase A (phospho-acceptor) domain BMQ_3911 PF00672 HAMP domain BMQ_3912 PF00291 Pyridoxal-phosphate dependent enzyme BMQ_3913 PF03061 Thioesterase superfamily BMQ_3914 PF00392 Bacterial regulatory proteins, gntR family BMQ_3914 PF07729 FCD domain BMQ_3915 PF13536 Putative multidrug resistance efflux transporter BMQ_3917 PF00557 Metallopeptidase family M24 BMQ_3917 PF01321 Creatinase/Prolidase N-terminal domain BMQ_3920 PF03816 Cell envelope-related transcriptional attenuator domain BMQ_3922 PF02525 Flavodoxin-like fold BMQ_3923 PF09529 Integral membrane protein (intg_mem_TP0381) BMQ_3925 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_3926 PF00005 ABC transporter BMQ_3926 PF00571 CBS domain BMQ_3929 PF07690 Major Facilitator Superfamily BMQ_3930 PF00440 Bacterial regulatory proteins, tetR family BMQ_3931 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_3932 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_3935 PF00356 Bacterial regulatory proteins, lacI family BMQ_3936 PF00512 His Kinase A (phospho-acceptor) domain BMQ_3936 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_3937 PF01925 Sulfite exporter TauE/SafE BMQ_3938 PF00375 Sodium:dicarboxylate symporter family BMQ_3940 PF03060 Nitronate monooxygenase BMQ_3945 PF03816 Cell envelope-related transcriptional attenuator domain BMQ_3946 PF00884 Sulfatase BMQ_3948 PF00892 EamA-like transporter family BMQ_3949 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BMQ_3952 PF00324 Amino acid permease BMQ_3953 PF05684 Protein of unknown function (DUF819) BMQ_3954 PF00440 Bacterial regulatory proteins, tetR family BMQ_3956 PF03466 LysR substrate binding domain BMQ_3956 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_3957 PF01925 Sulfite exporter TauE/SafE BMQ_3958 PF00583 Acetyltransferase (GNAT) family BMQ_3959 PF13460 NAD(P)H-binding BMQ_3960 PF02308 MgtC family BMQ_3961 PF01209 ubiE/COQ5 methyltransferase family BMQ_3962 PF05908 Poly-gamma-glutamate hydrolase BMQ_3963 PF00392 Bacterial regulatory proteins, gntR family BMQ_3963 PF00155 Aminotransferase class I and II BMQ_3966 PF00324 Amino acid permease BMQ_3971 PF00535 Glycosyl transferase family 2 BMQ_3977 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BMQ_3981 PF01810 LysE type translocator BMQ_3982 PF01235 Sodium:alanine symporter family BMQ_3984 PF01758 Sodium Bile acid symporter family BMQ_3985 PF00924 Mechanosensitive ion channel BMQ_3986 PF00188 Cysteine-rich secretory protein family BMQ_3987 PF03471 Transporter associated domain BMQ_3987 PF00571 CBS domain BMQ_3987 PF01595 Cyclin M transmembrane N-terminal domain BMQ_3989 PF02146 Sir2 family BMQ_3990 PF00582 Universal stress protein family BMQ_3992 PF00365 Phosphofructokinase BMQ_3993 PF01476 LysM domain BMQ_3993 PF00877 NlpC/P60 family BMQ_3994 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) BMQ_3997 PF01894 Uncharacterised protein family UPF0047 BMQ_3998 PF03323 Bacillus/Clostridium GerA spore germination protein BMQ_3999 PF03845 Spore germination protein BMQ_4000 PF05504 Spore germination B3/ GerAC like, C-terminal BMQ_4004 PF00005 ABC transporter BMQ_4007 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BMQ_4007 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BMQ_4010 PF03009 Glycerophosphoryl diester phosphodiesterase family BMQ_4012 PF00005 ABC transporter BMQ_4017 PF00367 phosphotransferase system, EIIB BMQ_4017 PF02378 Phosphotransferase system, EIIC BMQ_4018 PF00874 PRD domain BMQ_4018 PF03123 CAT RNA binding domain BMQ_4019 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BMQ_4020 PF02525 Flavodoxin-like fold BMQ_4023 PF01098 Cell cycle protein BMQ_4024 PF01740 STAS domain BMQ_4024 PF00916 Sulfate permease family BMQ_4025 PF01048 Phosphorylase superfamily BMQ_4027 PF14191 YodL-like BMQ_4028 PF01569 PAP2 superfamily BMQ_4030 PF07070 SpoOM protein BMQ_4031 PF00069 Protein kinase domain BMQ_4031 PF03793 PASTA domain BMQ_4033 PF10720 Protein of unknown function (DUF2515) BMQ_4034 PF14162 YozD-like protein BMQ_4036 PF06855 YozE SAM-like fold BMQ_4037 PF01757 Acyltransferase family BMQ_4038 PF01063 Amino-transferase class IV BMQ_4039 PF14122 YokU-like protein, putative antitoxin BMQ_4040 PF12544 Lysine-2,3-aminomutase BMQ_4041 PF00583 Acetyltransferase (GNAT) family BMQ_4042 PF07687 Peptidase dimerisation domain BMQ_4042 PF01546 Peptidase family M20/M25/M40 BMQ_4043 PF01144 Coenzyme A transferase BMQ_4044 PF01144 Coenzyme A transferase BMQ_4045 PF00202 Aminotransferase class-III BMQ_4046 PF00375 Sodium:dicarboxylate symporter family BMQ_4048 PF00512 His Kinase A (phospho-acceptor) domain BMQ_4048 PF00989 PAS fold BMQ_4048 PF08447 PAS fold BMQ_4048 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_4053 PF13472 GDSL-like Lipase/Acylhydrolase family BMQ_4054 PF02630 SCO1/SenC BMQ_4055 PF00512 His Kinase A (phospho-acceptor) domain BMQ_4055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_4056 PF02645 Uncharacterised protein, DegV family COG1307 BMQ_4057 PF10751 Protein of unknown function (DUF2535) BMQ_4058 PF00291 Pyridoxal-phosphate dependent enzyme BMQ_4058 PF00585 C-terminal regulatory domain of Threonine dehydratase BMQ_4059 PF00186 Dihydrofolate reductase BMQ_4060 PF00303 Thymidylate synthase BMQ_4061 PF00551 Formyl transferase BMQ_4061 PF01842 ACT domain BMQ_4063 PF06276 Ferric iron reductase FhuF-like transporter BMQ_4063 PF04183 IucA / IucC family BMQ_4065 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BMQ_4067 PF06276 Ferric iron reductase FhuF-like transporter BMQ_4067 PF04183 IucA / IucC family BMQ_4068 PF00282 Pyridoxal-dependent decarboxylase conserved domain BMQ_4069 PF00202 Aminotransferase class-III BMQ_4070 PF03932 CutC family BMQ_4072 PF00875 DNA photolyase BMQ_4072 PF03441 FAD binding domain of DNA photolyase BMQ_4073 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_4073 PF00512 His Kinase A (phospho-acceptor) domain BMQ_4073 PF00989 PAS fold BMQ_4076 PF00171 Aldehyde dehydrogenase family BMQ_4077 PF00158 Sigma-54 interaction domain BMQ_4078 PF00202 Aminotransferase class-III BMQ_4079 PF11084 Protein of unknown function (DUF2621) BMQ_4080 PF07301 Protein of unknown function (DUF1453) BMQ_4081 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BMQ_4082 PF02683 Cytochrome C biogenesis protein transmembrane region BMQ_4083 PF09388 Spo0E like sporulation regulatory protein BMQ_4084 PF00005 ABC transporter BMQ_4084 PF00664 ABC transporter transmembrane region BMQ_4085 PF00005 ABC transporter BMQ_4085 PF00664 ABC transporter transmembrane region BMQ_4086 PF03672 Uncharacterised protein family (UPF0154) BMQ_4087 PF10747 Sporulation inhibitor of replication protein SirA BMQ_4088 PF02779 Transketolase, pyrimidine binding domain BMQ_4088 PF02780 Transketolase, C-terminal domain BMQ_4088 PF00456 Transketolase, thiamine diphosphate binding domain BMQ_4089 PF05979 Bacterial protein of unknown function (DUF896) BMQ_4090 PF00239 Resolvase, N terminal domain BMQ_4091 PF01476 LysM domain BMQ_4092 PF01726 LexA DNA binding domain BMQ_4092 PF00717 Peptidase S24-like BMQ_4094 PF00535 Glycosyl transferase family 2 BMQ_4095 PF01545 Cation efflux family BMQ_4095 PF16916 Dimerisation domain of Zinc Transporter BMQ_4096 PF13520 Amino acid permease BMQ_4097 PF01520 N-acetylmuramoyl-L-alanine amidase BMQ_4097 PF05036 Sporulation related domain BMQ_4099 PF00120 Glutamine synthetase, catalytic domain BMQ_4099 PF03951 Glutamine synthetase, beta-Grasp domain BMQ_4100 PF13411 MerR HTH family regulatory protein BMQ_4101 PF06838 Methionine gamma-lyase BMQ_4102 PF13167 GTP-binding GTPase N-terminal BMQ_4102 PF16360 GTP-binding GTPase Middle Region BMQ_4102 PF01926 50S ribosome-binding GTPase BMQ_4103 PF03458 UPF0126 domain BMQ_4104 PF17866 AAA lid domain BMQ_4104 PF00004 ATPase family associated with various cellular activities (AAA) BMQ_4105 PF17209 Hfq protein BMQ_4107 PF01119 DNA mismatch repair protein, C-terminal domain BMQ_4107 PF08676 MutL C terminal dimerisation domain BMQ_4108 PF00488 MutS domain V BMQ_4108 PF05190 MutS family domain IV BMQ_4108 PF05192 MutS domain III BMQ_4108 PF01624 MutS domain I BMQ_4108 PF05188 MutS domain II BMQ_4109 PF13520 Amino acid permease BMQ_4110 PF10628 Outer spore coat protein E (CotE) BMQ_4111 PF06133 Control of competence regulator ComK, YlbF/YmcA BMQ_4112 PF04055 Radical SAM superfamily BMQ_4112 PF01938 TRAM domain BMQ_4112 PF00919 Uncharacterized protein family UPF0004 BMQ_4113 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BMQ_4114 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BMQ_4114 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BMQ_4114 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BMQ_4116 PF04232 Stage V sporulation protein S (SpoVS) BMQ_4117 PF13277 YmdB-like protein BMQ_4118 PF01966 HD domain BMQ_4118 PF12072 Domain of unknown function (DUF3552) BMQ_4118 PF00013 KH domain BMQ_4119 PF00154 recA bacterial DNA recombination protein BMQ_4120 PF02464 Competence-damaged protein BMQ_4120 PF18146 Damage-inducible protein CinA KH domain BMQ_4120 PF00994 Probable molybdopterin binding domain BMQ_4121 PF01066 CDP-alcohol phosphatidyltransferase BMQ_4122 PF13464 Domain of unknown function (DUF4115) BMQ_4123 PF11868 Protein of unknown function (DUF3388) BMQ_4124 PF11588 Protein of unknown function (DUF3243) BMQ_4126 PF00675 Insulinase (Peptidase family M16) BMQ_4126 PF05193 Peptidase M16 inactive domain BMQ_4127 PF05193 Peptidase M16 inactive domain BMQ_4132 PF00392 Bacterial regulatory proteins, gntR family BMQ_4132 PF07702 UTRA domain BMQ_4133 PF09397 Ftsk gamma domain BMQ_4133 PF17854 FtsK alpha domain BMQ_4133 PF01580 FtsK/SpoIIIE family BMQ_4134 PF14035 YlzJ-like protein BMQ_4135 PF00574 Clp protease BMQ_4136 PF00753 Metallo-beta-lactamase superfamily BMQ_4136 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BMQ_4136 PF17770 Ribonuclease J C-terminal domain BMQ_4137 PF00701 Dihydrodipicolinate synthetase family BMQ_4138 PF13840 ACT domain BMQ_4138 PF00696 Amino acid kinase family BMQ_4139 PF01118 Semialdehyde dehydrogenase, NAD binding domain BMQ_4139 PF02774 Semialdehyde dehydrogenase, dimerisation domain BMQ_4140 PF02441 Flavoprotein BMQ_4141 PF16924 Dipicolinate synthase subunit A N-terminal domain BMQ_4141 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BMQ_4142 PF05239 PRC-barrel domain BMQ_4143 PF05193 Peptidase M16 inactive domain BMQ_4143 PF00675 Insulinase (Peptidase family M16) BMQ_4144 PF01522 Polysaccharide deacetylase BMQ_4145 PF00575 S1 RNA binding domain BMQ_4145 PF03725 3' exoribonuclease family, domain 2 BMQ_4145 PF00013 KH domain BMQ_4145 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BMQ_4145 PF01138 3' exoribonuclease family, domain 1 BMQ_4146 PF00312 Ribosomal protein S15 BMQ_4147 PF06574 FAD synthetase BMQ_4147 PF01687 Riboflavin kinase BMQ_4148 PF01509 TruB family pseudouridylate synthase (N terminal domain) BMQ_4148 PF16198 tRNA pseudouridylate synthase B C-terminal domain BMQ_4149 PF02033 Ribosome-binding factor A BMQ_4150 PF04456 Protein of unknown function (DUF503) BMQ_4151 PF11987 Translation-initiation factor 2 BMQ_4151 PF04760 Translation initiation factor IF-2, N-terminal region BMQ_4151 PF00009 Elongation factor Tu GTP binding domain BMQ_4152 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BMQ_4153 PF04296 Protein of unknown function (DUF448) BMQ_4154 PF13184 NusA-like KH domain BMQ_4154 PF00575 S1 RNA binding domain BMQ_4154 PF08529 NusA N-terminal domain BMQ_4155 PF17384 RimP C-terminal SH3 domain BMQ_4155 PF02576 RimP N-terminal domain BMQ_4156 PF00929 Exonuclease BMQ_4156 PF14480 DNA polymerase III polC-type N-terminus I BMQ_4156 PF07733 Bacterial DNA polymerase III alpha NTPase domain BMQ_4156 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BMQ_4156 PF14579 Helix-hairpin-helix motif BMQ_4156 PF02811 PHP domain BMQ_4156 PF11490 DNA polymerase III polC-type N-terminus II BMQ_4157 PF04073 Aminoacyl-tRNA editing domain BMQ_4157 PF03129 Anticodon binding domain BMQ_4157 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BMQ_4158 PF13180 PDZ domain BMQ_4158 PF02163 Peptidase family M50 BMQ_4159 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BMQ_4159 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BMQ_4159 PF13288 DXP reductoisomerase C-terminal domain BMQ_4161 PF01255 Putative undecaprenyl diphosphate synthase BMQ_4162 PF01765 Ribosome recycling factor BMQ_4163 PF00696 Amino acid kinase family BMQ_4164 PF00889 Elongation factor TS BMQ_4165 PF00318 Ribosomal protein S2 BMQ_4167 PF04545 Sigma-70, region 4 BMQ_4167 PF04539 Sigma-70 region 3 BMQ_4167 PF04542 Sigma-70 region 2 BMQ_4168 PF03975 CheD chemotactic sensory transduction BMQ_4169 PF01584 CheW-like domain BMQ_4170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_4170 PF01584 CheW-like domain BMQ_4170 PF01627 Hpt domain BMQ_4170 PF02895 Signal transducing histidine kinase, homodimeric domain BMQ_4170 PF07194 P2 response regulator binding domain BMQ_4171 PF01339 CheB methylesterase BMQ_4171 PF00072 Response regulator receiver domain BMQ_4172 PF10609 NUBPL iron-transfer P-loop NTPase BMQ_4173 PF00448 SRP54-type protein, GTPase domain BMQ_4174 PF00771 FHIPEP family BMQ_4175 PF01312 FlhB HrpN YscU SpaS Family BMQ_4176 PF01311 Bacterial export proteins, family 1 BMQ_4177 PF01313 Bacterial export proteins, family 3 BMQ_4178 PF00813 FliP family BMQ_4179 PF04347 Flagellar biosynthesis protein, FliO BMQ_4180 PF00072 Response regulator receiver domain BMQ_4181 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BMQ_4181 PF04509 CheC-like family BMQ_4182 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BMQ_4182 PF02154 Flagellar motor switch protein FliM BMQ_4184 PF06289 Flagellar and Swarming motility proteins BMQ_4185 PF00460 Flagella basal body rod protein BMQ_4185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BMQ_4186 PF03963 Flagellar hook capping protein - N-terminal region BMQ_4189 PF02050 Flagellar FliJ protein BMQ_4190 PF18269 T3SS EscN ATPase C-terminal domain BMQ_4190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BMQ_4190 PF02874 ATP synthase alpha/beta family, beta-barrel domain BMQ_4191 PF02108 Flagellar assembly protein FliH BMQ_4192 PF14841 FliG middle domain BMQ_4192 PF14842 FliG N-terminal domain BMQ_4192 PF01706 FliG C-terminal domain BMQ_4193 PF08345 Flagellar M-ring protein C-terminal BMQ_4193 PF01514 Secretory protein of YscJ/FliF family BMQ_4194 PF02049 Flagellar hook-basal body complex protein FliE BMQ_4195 PF00460 Flagella basal body rod protein BMQ_4195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BMQ_4196 PF00460 Flagella basal body rod protein BMQ_4197 PF08222 CodY helix-turn-helix domain BMQ_4197 PF06018 CodY GAF-like domain BMQ_4198 PF10431 C-terminal, D2-small domain, of ClpB protein BMQ_4198 PF00004 ATPase family associated with various cellular activities (AAA) BMQ_4198 PF07724 AAA domain (Cdc48 subfamily) BMQ_4199 PF00227 Proteasome subunit BMQ_4200 PF00589 Phage integrase family BMQ_4200 PF02899 Phage integrase, N-terminal SAM-like domain BMQ_4202 PF01751 Toprim domain BMQ_4202 PF01131 DNA topoisomerase BMQ_4202 PF01396 Topoisomerase DNA binding C4 zinc finger BMQ_4203 PF02481 DNA recombination-mediator protein A BMQ_4204 PF02629 CoA binding domain BMQ_4204 PF00549 CoA-ligase BMQ_4205 PF00549 CoA-ligase BMQ_4205 PF08442 ATP-grasp domain BMQ_4206 PF01351 Ribonuclease HII BMQ_4207 PF01926 50S ribosome-binding GTPase BMQ_4208 PF10502 Signal peptidase, peptidase S26 BMQ_4209 PF01245 Ribosomal protein L19 BMQ_4210 PF01746 tRNA (Guanine-1)-methyltransferase BMQ_4211 PF05239 PRC-barrel domain BMQ_4211 PF01782 RimM N-terminal domain BMQ_4214 PF00886 Ribosomal protein S16 BMQ_4215 PF00448 SRP54-type protein, GTPase domain BMQ_4215 PF02978 Signal peptide binding domain BMQ_4215 PF02881 SRP54-type protein, helical bundle domain BMQ_4216 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BMQ_4217 PF00448 SRP54-type protein, GTPase domain BMQ_4217 PF02881 SRP54-type protein, helical bundle domain BMQ_4218 PF06470 SMC proteins Flexible Hinge Domain BMQ_4218 PF02463 RecF/RecN/SMC N terminal domain BMQ_4220 PF00550 Phosphopantetheine attachment site BMQ_4222 PF00698 Acyl transferase domain BMQ_4223 PF02504 Fatty acid synthesis protein BMQ_4224 PF08279 HTH domain BMQ_4224 PF01575 MaoC like domain BMQ_4225 PF00270 DEAD/DEAH box helicase BMQ_4225 PF00271 Helicase conserved C-terminal domain BMQ_4225 PF17191 RecG wedge domain BMQ_4227 PF01842 ACT domain BMQ_4227 PF03315 Serine dehydratase beta chain BMQ_4229 PF13684 Dihydroxyacetone kinase family BMQ_4229 PF02734 DAK2 domain BMQ_4230 PF03780 Asp23 family, cell envelope-related function BMQ_4231 PF00830 Ribosomal L28 family BMQ_4232 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BMQ_4232 PF04263 Thiamin pyrophosphokinase, catalytic domain BMQ_4233 PF00834 Ribulose-phosphate 3 epimerase family BMQ_4234 PF16745 RsgA N-terminal domain BMQ_4234 PF03193 RsgA GTPase BMQ_4235 PF00069 Protein kinase domain BMQ_4235 PF03793 PASTA domain BMQ_4237 PF04055 Radical SAM superfamily BMQ_4238 PF01029 NusB family BMQ_4238 PF01189 16S rRNA methyltransferase RsmB/F BMQ_4239 PF00551 Formyl transferase BMQ_4239 PF02911 Formyl transferase, C-terminal domain BMQ_4240 PF01327 Polypeptide deformylase BMQ_4241 PF17764 3′ DNA-binding domain (3′BD) BMQ_4241 PF18074 Primosomal protein N C-terminal domain BMQ_4241 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BMQ_4241 PF00271 Helicase conserved C-terminal domain BMQ_4241 PF04851 Type III restriction enzyme, res subunit BMQ_4242 PF02441 Flavoprotein BMQ_4242 PF04127 DNA / pantothenate metabolism flavoprotein BMQ_4243 PF01192 RNA polymerase Rpb6 BMQ_4244 PF00625 Guanylate kinase BMQ_4245 PF08340 Domain of unknown function (DUF1732) BMQ_4245 PF03755 YicC-like family, N-terminal region BMQ_4246 PF00689 Cation transporting ATPase, C-terminus BMQ_4246 PF00690 Cation transporter/ATPase, N-terminus BMQ_4248 PF00156 Phosphoribosyl transferase domain BMQ_4249 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BMQ_4250 PF01180 Dihydroorotate dehydrogenase BMQ_4251 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BMQ_4252 PF02142 MGS-like domain BMQ_4252 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BMQ_4252 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BMQ_4253 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BMQ_4253 PF00117 Glutamine amidotransferase class-I BMQ_4254 PF01979 Amidohydrolase family BMQ_4256 PF00860 Permease family BMQ_4257 PF00156 Phosphoribosyl transferase domain BMQ_4258 PF00849 RNA pseudouridylate synthase BMQ_4258 PF01479 S4 domain BMQ_4259 PF01252 Signal peptidase (SPase) II BMQ_4261 PF08264 Anticodon-binding domain of tRNA BMQ_4261 PF00133 tRNA synthetases class I (I, L, M and V) BMQ_4261 PF06827 Zinc finger found in FPG and IleRS BMQ_4262 PF05103 DivIVA protein BMQ_4263 PF17774 Putative RNA-binding domain in YlmH BMQ_4263 PF01479 S4 domain BMQ_4264 PF02325 YGGT family BMQ_4265 PF04472 Cell division protein SepF BMQ_4266 PF01168 Alanine racemase, N-terminal domain BMQ_4268 PF05239 PRC-barrel domain BMQ_4269 PF04542 Sigma-70 region 2 BMQ_4269 PF04539 Sigma-70 region 3 BMQ_4269 PF04545 Sigma-70, region 4 BMQ_4270 PF04545 Sigma-70, region 4 BMQ_4270 PF04542 Sigma-70 region 2 BMQ_4271 PF03419 Sporulation factor SpoIIGA BMQ_4272 PF12327 FtsZ family, C-terminal domain BMQ_4272 PF00091 Tubulin/FtsZ family, GTPase domain BMQ_4273 PF02491 SHS2 domain inserted in FTSA BMQ_4274 PF08478 POTRA domain, FtsQ-type BMQ_4275 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BMQ_4275 PF01565 FAD binding domain BMQ_4276 PF01098 Cell cycle protein BMQ_4277 PF02875 Mur ligase family, glutamate ligase domain BMQ_4277 PF08245 Mur ligase middle domain BMQ_4278 PF00953 Glycosyl transferase family 4 BMQ_4279 PF08245 Mur ligase middle domain BMQ_4279 PF02875 Mur ligase family, glutamate ligase domain BMQ_4279 PF01225 Mur ligase family, catalytic domain BMQ_4280 PF03717 Penicillin-binding Protein dimerisation domain BMQ_4280 PF00905 Penicillin binding protein transpeptidase domain BMQ_4280 PF03793 PASTA domain BMQ_4282 PF04977 Septum formation initiator BMQ_4283 PF01795 MraW methylase family BMQ_4284 PF10079 Bacillithiol biosynthesis BshC BMQ_4286 PF02558 Ketopantoate reductase PanE/ApbA BMQ_4286 PF08546 Ketopantoate reductase PanE/ApbA C terminal BMQ_4287 PF01039 Carboxyl transferase domain BMQ_4288 PF00364 Biotin-requiring enzyme BMQ_4289 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BMQ_4289 PF00289 Biotin carboxylase, N-terminal domain BMQ_4289 PF02785 Biotin carboxylase C-terminal domain BMQ_4290 PF13508 Acetyltransferase (GNAT) domain BMQ_4292 PF00378 Enoyl-CoA hydratase/isomerase BMQ_4293 PF01783 Ribosomal L32p protein family BMQ_4294 PF02620 Large ribosomal RNA subunit accumulation protein YceD BMQ_4295 PF05636 HIGH Nucleotidyl Transferase BMQ_4296 PF05362 Lon protease (S16) C-terminal proteolytic domain BMQ_4296 PF13180 PDZ domain BMQ_4297 PF01734 Patatin-like phospholipase BMQ_4298 PF07670 Nucleoside recognition BMQ_4299 PF01467 Cytidylyltransferase-like BMQ_4302 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BMQ_4303 PF06133 Control of competence regulator ComK, YlbF/YmcA BMQ_4305 PF14003 YlbE-like protein BMQ_4306 PF14071 Putative coat protein BMQ_4307 PF07187 Protein of unknown function (DUF1405) BMQ_4308 PF00032 Cytochrome b(C-terminal)/b6/petD BMQ_4308 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BMQ_4309 PF00033 Cytochrome b/b6/petB BMQ_4310 PF00355 Rieske [2Fe-2S] domain BMQ_4312 PF10673 Protein of unknown function (DUF2487) BMQ_4313 PF08864 UPF0302 domain BMQ_4313 PF08858 IDEAL domain BMQ_4315 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BMQ_4316 PF01842 ACT domain BMQ_4316 PF02153 Prephenate dehydrogenase BMQ_4317 PF00155 Aminotransferase class I and II BMQ_4318 PF00290 Tryptophan synthase alpha chain BMQ_4319 PF00291 Pyridoxal-phosphate dependent enzyme BMQ_4320 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BMQ_4321 PF00218 Indole-3-glycerol phosphate synthase BMQ_4322 PF02885 Glycosyl transferase family, helical bundle domain BMQ_4322 PF00591 Glycosyl transferase family, a/b domain BMQ_4323 PF00425 chorismate binding enzyme BMQ_4323 PF04715 Anthranilate synthase component I, N terminal region BMQ_4324 PF01761 3-dehydroquinate synthase BMQ_4325 PF01264 Chorismate synthase BMQ_4326 PF01739 CheR methyltransferase, SAM binding domain BMQ_4326 PF03705 CheR methyltransferase, all-alpha domain BMQ_4327 PF00334 Nucleoside diphosphate kinase BMQ_4328 PF00348 Polyprenyl synthetase BMQ_4329 PF01209 ubiE/COQ5 methyltransferase family BMQ_4330 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BMQ_4331 PF02081 Tryptophan RNA-binding attenuator protein BMQ_4332 PF01227 GTP cyclohydrolase I BMQ_4333 PF00216 Bacterial DNA-binding protein BMQ_4334 PF09547 Stage IV sporulation protein A (spore_IV_A) BMQ_4337 PF10966 Protein of unknown function (DUF2768) BMQ_4338 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BMQ_4338 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BMQ_4339 PF01926 50S ribosome-binding GTPase BMQ_4339 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BMQ_4341 PF14140 YpzI-like protein BMQ_4342 PF07690 Major Facilitator Superfamily BMQ_4343 PF01070 FMN-dependent dehydrogenase BMQ_4344 PF00575 S1 RNA binding domain BMQ_4345 PF01553 Acyltransferase BMQ_4346 PF02224 Cytidylate kinase BMQ_4349 PF14620 YpeB sporulation BMQ_4349 PF03413 Peptidase propeptide and YPEB domain BMQ_4350 PF01471 Putative peptidoglycan binding domain BMQ_4350 PF07486 Cell Wall Hydrolase BMQ_4351 PF13367 PrsW family intramembrane metalloprotease BMQ_4352 PF00710 Asparaginase, N-terminal BMQ_4352 PF17763 Glutaminase/Asparaginase C-terminal domain BMQ_4354 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BMQ_4354 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BMQ_4355 PF05389 Negative regulator of genetic competence (MecA) BMQ_4356 PF13411 MerR HTH family regulatory protein BMQ_4357 PF00149 Calcineurin-like phosphoesterase BMQ_4360 PF02517 CPBP intramembrane metalloprotease BMQ_4361 PF00270 DEAD/DEAH box helicase BMQ_4361 PF00271 Helicase conserved C-terminal domain BMQ_4364 PF12822 ECF transporter, substrate-specific component BMQ_4365 PF01842 ACT domain BMQ_4365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BMQ_4365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BMQ_4366 PF01551 Peptidase family M23 BMQ_4367 PF00672 HAMP domain BMQ_4367 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_4367 PF18698 Histidine kinase sensor domain BMQ_4367 PF00512 His Kinase A (phospho-acceptor) domain BMQ_4367 PF00989 PAS fold BMQ_4368 PF00072 Response regulator receiver domain BMQ_4368 PF00486 Transcriptional regulatory protein, C terminal BMQ_4369 PF01578 Cytochrome C assembly protein BMQ_4370 PF05140 ResB-like family BMQ_4371 PF00578 AhpC/TSA family BMQ_4372 PF01479 S4 domain BMQ_4372 PF00849 RNA pseudouridylate synthase BMQ_4373 PF07670 Nucleoside recognition BMQ_4374 PF07670 Nucleoside recognition BMQ_4375 PF00768 D-alanyl-D-alanine carboxypeptidase BMQ_4375 PF07943 Penicillin-binding protein 5, C-terminal domain BMQ_4376 PF04079 Segregation and condensation complex subunit ScpB BMQ_4377 PF02616 Segregation and condensation protein ScpA BMQ_4379 PF03745 Domain of unknown function (DUF309) BMQ_4380 PF00583 Acetyltransferase (GNAT) family BMQ_4381 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BMQ_4382 PF06207 Protein of unknown function (DUF1002) BMQ_4383 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BMQ_4383 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BMQ_4384 PF03323 Bacillus/Clostridium GerA spore germination protein BMQ_4385 PF14097 Stage V sporulation protein AE1 BMQ_4386 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BMQ_4387 PF07451 Stage V sporulation protein AD (SpoVAD) BMQ_4388 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BMQ_4389 PF13782 Stage V sporulation protein AB BMQ_4390 PF12164 Stage V sporulation protein AA BMQ_4391 PF04542 Sigma-70 region 2 BMQ_4391 PF04539 Sigma-70 region 3 BMQ_4391 PF04545 Sigma-70, region 4 BMQ_4392 PF13581 Histidine kinase-like ATPase domain BMQ_4393 PF01740 STAS domain BMQ_4394 PF00768 D-alanyl-D-alanine carboxypeptidase BMQ_4394 PF07943 Penicillin-binding protein 5, C-terminal domain BMQ_4395 PF01048 Phosphorylase superfamily BMQ_4396 PF01676 Metalloenzyme superfamily BMQ_4397 PF02899 Phage integrase, N-terminal SAM-like domain BMQ_4397 PF00589 Phage integrase family BMQ_4398 PF14004 Protein of unknown function (DUF4227) BMQ_4399 PF01475 Ferric uptake regulator family BMQ_4400 PF01944 Stage II sporulation protein M BMQ_4401 PF00293 NUDIX domain BMQ_4402 PF13072 Mother cell inhibitor of FtsZ BMQ_4403 PF00248 Aldo/keto reductase family BMQ_4405 PF01144 Coenzyme A transferase BMQ_4406 PF01144 Coenzyme A transferase BMQ_4407 PF00108 Thiolase, N-terminal domain BMQ_4407 PF02803 Thiolase, C-terminal domain BMQ_4408 PF00682 HMGL-like BMQ_4409 PF12146 Serine aminopeptidase, S33 BMQ_4412 PF00106 short chain dehydrogenase BMQ_4413 PF00753 Metallo-beta-lactamase superfamily BMQ_4414 PF14748 Pyrroline-5-carboxylate reductase dimerisation BMQ_4414 PF03807 NADP oxidoreductase coenzyme F420-dependent BMQ_4415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BMQ_4416 PF12706 Beta-lactamase superfamily domain BMQ_4416 PF00753 Metallo-beta-lactamase superfamily BMQ_4417 PF00202 Aminotransferase class-III BMQ_4418 PF00171 Aldehyde dehydrogenase family BMQ_4419 PF07905 Purine catabolism regulatory protein-like family BMQ_4419 PF13556 PucR C-terminal helix-turn-helix domain BMQ_4419 PF17853 GGDEF-like domain BMQ_4422 PF01979 Amidohydrolase family BMQ_4423 PF01180 Dihydroorotate dehydrogenase BMQ_4424 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMQ_4424 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BMQ_4425 PF07687 Peptidase dimerisation domain BMQ_4425 PF01546 Peptidase family M20/M25/M40 BMQ_4426 PF01039 Carboxyl transferase domain BMQ_4428 PF03734 L,D-transpeptidase catalytic domain BMQ_4429 PF06081 Aromatic acid exporter family member 1 BMQ_4429 PF11728 Putative aromatic acid exporter C-terminal domain BMQ_4430 PF00005 ABC transporter BMQ_4431 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_4432 PF00497 Bacterial extracellular solute-binding proteins, family 3 BMQ_4433 PF06491 Disulphide isomerase BMQ_4435 PF02310 B12 binding domain BMQ_4435 PF01642 Methylmalonyl-CoA mutase BMQ_4437 PF02817 e3 binding domain BMQ_4437 PF00364 Biotin-requiring enzyme BMQ_4437 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BMQ_4438 PF02780 Transketolase, C-terminal domain BMQ_4438 PF02779 Transketolase, pyrimidine binding domain BMQ_4439 PF00676 Dehydrogenase E1 component BMQ_4440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BMQ_4440 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMQ_4441 PF00871 Acetokinase family BMQ_4442 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BMQ_4442 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BMQ_4443 PF01515 Phosphate acetyl/butaryl transferase BMQ_4444 PF00989 PAS fold BMQ_4444 PF02954 Bacterial regulatory protein, Fis family BMQ_4444 PF00158 Sigma-54 interaction domain BMQ_4445 PF11118 Protein of unknown function (DUF2627) BMQ_4446 PF03009 Glycerophosphoryl diester phosphodiesterase family BMQ_4447 PF14174 YycC-like protein BMQ_4448 PF00854 POT family BMQ_4450 PF00072 Response regulator receiver domain BMQ_4450 PF08769 Sporulation initiation factor Spo0A C terminal BMQ_4451 PF05580 SpoIVB peptidase S55 BMQ_4451 PF17820 PDZ domain BMQ_4452 PF13476 AAA domain BMQ_4453 PF01316 Arginine repressor, DNA binding domain BMQ_4453 PF02863 Arginine repressor, C-terminal domain BMQ_4454 PF01728 FtsJ-like methyltransferase BMQ_4454 PF01479 S4 domain BMQ_4455 PF02780 Transketolase, C-terminal domain BMQ_4455 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BMQ_4455 PF02779 Transketolase, pyrimidine binding domain BMQ_4456 PF00348 Polyprenyl synthetase BMQ_4457 PF02609 Exonuclease VII small subunit BMQ_4458 PF13742 OB-fold nucleic acid binding domain BMQ_4458 PF02601 Exonuclease VII, large subunit BMQ_4459 PF01029 NusB family BMQ_4460 PF03780 Asp23 family, cell envelope-related function BMQ_4461 PF00289 Biotin carboxylase, N-terminal domain BMQ_4461 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BMQ_4461 PF02785 Biotin carboxylase C-terminal domain BMQ_4462 PF00364 Biotin-requiring enzyme BMQ_4463 PF12685 SpoIIIAH-like protein BMQ_4465 PF09581 Stage III sporulation protein AF (Spore_III_AF) BMQ_4466 PF09546 Stage III sporulation protein AE (spore_III_AE) BMQ_4467 PF06686 Stage III sporulation protein AC/AD protein family BMQ_4468 PF06686 Stage III sporulation protein AC/AD protein family BMQ_4469 PF09548 Stage III sporulation protein AB (spore_III_AB) BMQ_4471 PF10942 Protein of unknown function (DUF2619) BMQ_4472 PF01132 Elongation factor P (EF-P) OB domain BMQ_4472 PF08207 Elongation factor P (EF-P) KOW-like domain BMQ_4472 PF09285 Elongation factor P, C-terminal BMQ_4473 PF01321 Creatinase/Prolidase N-terminal domain BMQ_4473 PF00557 Metallopeptidase family M24 BMQ_4474 PF01220 Dehydroquinase class II BMQ_4475 PF11085 Conserved membrane protein YqhR BMQ_4476 PF07136 Protein of unknown function (DUF1385) BMQ_4478 PF01734 Patatin-like phospholipase BMQ_4479 PF01325 Iron dependent repressor, N-terminal DNA binding domain BMQ_4479 PF02742 Iron dependent repressor, metal binding and dimerisation domain BMQ_4481 PF03099 Biotin/lipoate A/B protein ligase family BMQ_4482 PF00581 Rhodanese-like domain BMQ_4483 PF02347 Glycine cleavage system P-protein BMQ_4484 PF02347 Glycine cleavage system P-protein BMQ_4485 PF08669 Glycine cleavage T-protein C-terminal barrel domain BMQ_4485 PF01571 Aminomethyltransferase folate-binding domain BMQ_4486 PF00271 Helicase conserved C-terminal domain BMQ_4486 PF00176 SNF2 family N-terminal domain BMQ_4487 PF11079 Bacterial protein YqhG of unknown function BMQ_4488 PF14038 YqzE-like protein BMQ_4492 PF07963 Prokaryotic N-terminal methylation motif BMQ_4493 PF07963 Prokaryotic N-terminal methylation motif BMQ_4494 PF00482 Type II secretion system (T2SS), protein F BMQ_4495 PF00437 Type II/IV secretion system protein BMQ_4496 PF03960 ArsC family BMQ_4497 PF11117 Protein of unknown function (DUF2626) BMQ_4498 PF00753 Metallo-beta-lactamase superfamily BMQ_4500 PF00246 Zinc carboxypeptidase BMQ_4501 PF00480 ROK family BMQ_4502 PF06014 Bacterial protein of unknown function (DUF910) BMQ_4503 PF01694 Rhomboid family BMQ_4506 PF01812 5-formyltetrahydrofolate cyclo-ligase family BMQ_4507 PF00471 Ribosomal protein L33 BMQ_4508 PF00483 Nucleotidyl transferase BMQ_4509 PF00534 Glycosyl transferases group 1 BMQ_4509 PF13439 Glycosyltransferase Family 4 BMQ_4511 PF01895 PhoU domain BMQ_4512 PF00005 ABC transporter BMQ_4515 PF07690 Major Facilitator Superfamily BMQ_4516 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BMQ_4516 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BMQ_4522 PF04306 Protein of unknown function (DUF456) BMQ_4525 PF07690 Major Facilitator Superfamily BMQ_4527 PF04551 GcpE protein BMQ_4530 PF01475 Ferric uptake regulator family BMQ_4531 PF00950 ABC 3 transport family BMQ_4532 PF00005 ABC transporter BMQ_4534 PF01261 Xylose isomerase-like TIM barrel BMQ_4535 PF00271 Helicase conserved C-terminal domain BMQ_4535 PF00270 DEAD/DEAH box helicase BMQ_4537 PF02401 LytB protein BMQ_4538 PF01784 NIF3 (NGG1p interacting factor 3) BMQ_4539 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BMQ_4540 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BMQ_4541 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BMQ_4541 PF02770 Acyl-CoA dehydrogenase, middle domain BMQ_4541 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BMQ_4542 PF04545 Sigma-70, region 4 BMQ_4542 PF03979 Sigma-70 factor, region 1.1 BMQ_4542 PF04539 Sigma-70 region 3 BMQ_4542 PF00140 Sigma-70 factor, region 1.2 BMQ_4542 PF04542 Sigma-70 region 2 BMQ_4543 PF08275 DNA primase catalytic core, N-terminal domain BMQ_4543 PF01807 CHC2 zinc finger BMQ_4543 PF10410 DnaB-helicase binding domain of primase BMQ_4544 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BMQ_4545 PF03618 Kinase/pyrophosphorylase BMQ_4546 PF00571 CBS domain BMQ_4546 PF08279 HTH domain BMQ_4547 PF02565 Recombination protein O C terminal BMQ_4547 PF11967 Recombination protein O N terminal BMQ_4548 PF01926 50S ribosome-binding GTPase BMQ_4548 PF07650 KH domain BMQ_4549 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BMQ_4550 PF01219 Prokaryotic diacylglycerol kinase BMQ_4551 PF02130 Uncharacterized protein family UPF0054 BMQ_4552 PF07698 7TM receptor with intracellular HD hydrolase BMQ_4552 PF01966 HD domain BMQ_4552 PF07697 7TM-HD extracellular BMQ_4553 PF02562 PhoH-like protein BMQ_4554 PF06898 Putative stage IV sporulation protein YqfD BMQ_4555 PF07873 YabP family BMQ_4557 PF12127 SigmaW regulon antibacterial BMQ_4558 PF01972 Serine dehydrogenase proteinase BMQ_4558 PF01957 NfeD-like C-terminal, partner-binding BMQ_4559 PF09424 Yqey-like protein BMQ_4560 PF01165 Ribosomal protein S21 BMQ_4561 PF04055 Radical SAM superfamily BMQ_4561 PF01938 TRAM domain BMQ_4561 PF00919 Uncharacterized protein family UPF0004 BMQ_4562 PF04452 RNA methyltransferase BMQ_4564 PF00684 DnaJ central domain BMQ_4564 PF01556 DnaJ C terminal domain BMQ_4564 PF00226 DnaJ domain BMQ_4565 PF00012 Hsp70 protein BMQ_4566 PF01025 GrpE BMQ_4567 PF01628 HrcA protein C terminal domain BMQ_4568 PF04055 Radical SAM superfamily BMQ_4568 PF06969 HemN C-terminal domain BMQ_4569 PF06421 GTP-binding protein LepA C-terminus BMQ_4569 PF03144 Elongation factor Tu domain 2 BMQ_4569 PF00009 Elongation factor Tu GTP binding domain BMQ_4569 PF00679 Elongation factor G C-terminus BMQ_4571 PF03418 Germination protease BMQ_4572 PF01649 Ribosomal protein S20 BMQ_4573 PF06144 DNA polymerase III, delta subunit BMQ_4574 PF14141 YqzM-like protein BMQ_4575 PF00753 Metallo-beta-lactamase superfamily BMQ_4575 PF13567 Domain of unknown function (DUF4131) BMQ_4575 PF03772 Competence protein BMQ_4576 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BMQ_4577 PF10531 SLBB domain BMQ_4578 PF14748 Pyrroline-5-carboxylate reductase dimerisation BMQ_4578 PF03807 NADP oxidoreductase coenzyme F420-dependent BMQ_4579 PF13649 Methyltransferase domain BMQ_4581 PF01966 HD domain BMQ_4582 PF01467 Cytidylyltransferase-like BMQ_4583 PF01985 CRS1 / YhbY (CRM) domain BMQ_4584 PF01488 Shikimate / quinate 5-dehydrogenase BMQ_4584 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BMQ_4584 PF08501 Shikimate dehydrogenase substrate binding domain BMQ_4585 PF01926 50S ribosome-binding GTPase BMQ_4587 PF08970 Sporulation inhibitor A BMQ_4588 PF02666 Phosphatidylserine decarboxylase BMQ_4589 PF01066 CDP-alcohol phosphatidyltransferase BMQ_4591 PF04545 Sigma-70, region 4 BMQ_4591 PF04542 Sigma-70 region 2 BMQ_4592 PF09501 Probable sporulation protein (Bac_small_yrzI) BMQ_4594 PF01053 Cys/Met metabolism PLP-dependent enzyme BMQ_4595 PF00291 Pyridoxal-phosphate dependent enzyme BMQ_4596 PF01048 Phosphorylase superfamily BMQ_4597 PF13649 Methyltransferase domain BMQ_4598 PF10750 Protein of unknown function (DUF2536) BMQ_4600 PF03717 Penicillin-binding Protein dimerisation domain BMQ_4600 PF00905 Penicillin binding protein transpeptidase domain BMQ_4601 PF00857 Isochorismatase family BMQ_4602 PF03449 Transcription elongation factor, N-terminal BMQ_4602 PF01272 Transcription elongation factor, GreA/GreB, C-term BMQ_4603 PF00485 Phosphoribulokinase / Uridine kinase family BMQ_4607 PF02618 YceG-like family BMQ_4608 PF06949 Protein of unknown function (DUF1292) BMQ_4609 PF03652 Holliday junction resolvase BMQ_4610 PF06135 IreB regulatory phosphoprotein BMQ_4611 PF02272 DHHA1 domain BMQ_4611 PF01411 tRNA synthetases class II (A) BMQ_4611 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BMQ_4613 PF01594 AI-2E family transporter BMQ_4616 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BMQ_4616 PF13538 UvrD-like helicase C-terminal domain BMQ_4616 PF14490 Helix-hairpin-helix containing domain BMQ_4619 PF00266 Aminotransferase class-V BMQ_4620 PF02082 Transcriptional regulator BMQ_4621 PF12002 MgsA AAA+ ATPase C terminal BMQ_4621 PF05496 Holliday junction DNA helicase RuvB P-loop domain BMQ_4621 PF16193 AAA C-terminal domain BMQ_4622 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_4623 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_4624 PF12849 PBP superfamily domain BMQ_4625 PF00899 ThiF family BMQ_4626 PF02938 GAD domain BMQ_4626 PF01336 OB-fold nucleic acid binding domain BMQ_4626 PF00152 tRNA synthetases class II (D, K and N) BMQ_4627 PF13393 Histidyl-tRNA synthetase BMQ_4627 PF03129 Anticodon binding domain BMQ_4629 PF01520 N-acetylmuramoyl-L-alanine amidase BMQ_4629 PF08239 Bacterial SH3 domain BMQ_4630 PF02580 D-Tyr-tRNA(Tyr) deacylase BMQ_4631 PF04607 Region found in RelA / SpoT proteins BMQ_4631 PF02824 TGS domain BMQ_4631 PF13291 ACT domain BMQ_4632 PF00156 Phosphoribosyl transferase domain BMQ_4633 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BMQ_4633 PF17768 RecJ OB domain BMQ_4633 PF02272 DHHA1 domain BMQ_4633 PF01368 DHH family BMQ_4634 PF07549 SecD/SecF GG Motif BMQ_4634 PF02355 Protein export membrane protein BMQ_4635 PF13797 Post-transcriptional regulator BMQ_4636 PF14667 Polysaccharide biosynthesis C-terminal domain BMQ_4636 PF01943 Polysaccharide biosynthesis protein BMQ_4637 PF04239 Protein of unknown function (DUF421) BMQ_4638 PF12670 Protein of unknown function (DUF3792) BMQ_4639 PF02699 Preprotein translocase subunit BMQ_4641 PF02547 Queuosine biosynthesis protein BMQ_4642 PF11146 Protein of unknown function (DUF2905) BMQ_4643 PF17864 RuvB AAA lid domain BMQ_4643 PF05491 RuvB C-terminal winged helix domain BMQ_4643 PF05496 Holliday junction DNA helicase RuvB P-loop domain BMQ_4645 PF08955 BofC C-terminal domain BMQ_4645 PF08977 Bypass of Forespore C, N terminal BMQ_4649 PF01476 LysM domain BMQ_4650 PF02445 Quinolinate synthetase A protein BMQ_4651 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BMQ_4651 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BMQ_4652 PF00890 FAD binding domain BMQ_4652 PF02910 Fumarate reductase flavoprotein C-term BMQ_4654 PF02829 3H domain BMQ_4654 PF08279 HTH domain BMQ_4655 PF00800 Prephenate dehydratase BMQ_4655 PF01842 ACT domain BMQ_4656 PF01842 ACT domain BMQ_4657 PF09269 Domain of unknown function (DUF1967) BMQ_4657 PF01018 GTP1/OBG BMQ_4657 PF01926 50S ribosome-binding GTPase BMQ_4658 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BMQ_4658 PF14682 Sporulation initiation phospho-transferase B, C-terminal BMQ_4659 PF01016 Ribosomal L27 protein BMQ_4660 PF04327 Cysteine protease Prp BMQ_4661 PF00829 Ribosomal prokaryotic L21 protein BMQ_4662 PF00575 S1 RNA binding domain BMQ_4662 PF10150 Ribonuclease E/G family BMQ_4663 PF02163 Peptidase family M50 BMQ_4664 PF01551 Peptidase family M23 BMQ_4665 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BMQ_4666 PF03775 Septum formation inhibitor MinC, C-terminal domain BMQ_4667 PF04093 rod shape-determining protein MreD BMQ_4668 PF04085 rod shape-determining protein MreC BMQ_4670 PF04002 RadC-like JAB domain BMQ_4671 PF02545 Maf-like protein BMQ_4673 PF01478 Type IV leader peptidase family BMQ_4673 PF06750 Bacterial Peptidase A24 N-terminal domain BMQ_4675 PF04238 Protein of unknown function (DUF420) BMQ_4676 PF08245 Mur ligase middle domain BMQ_4676 PF02875 Mur ligase family, glutamate ligase domain BMQ_4677 PF08264 Anticodon-binding domain of tRNA BMQ_4677 PF00133 tRNA synthetases class I (I, L, M and V) BMQ_4677 PF10458 Valyl tRNA synthetase tRNA binding arm BMQ_4680 PF01476 LysM domain BMQ_4681 PF00202 Aminotransferase class-III BMQ_4682 PF00490 Delta-aminolevulinic acid dehydratase BMQ_4683 PF02602 Uroporphyrinogen-III synthase HemD BMQ_4684 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BMQ_4684 PF03900 Porphobilinogen deaminase, C-terminal domain BMQ_4685 PF01578 Cytochrome C assembly protein BMQ_4686 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BMQ_4686 PF01488 Shikimate / quinate 5-dehydrogenase BMQ_4686 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BMQ_4688 PF01926 50S ribosome-binding GTPase BMQ_4689 PF02190 ATP-dependent protease La (LON) substrate-binding domain BMQ_4689 PF00004 ATPase family associated with various cellular activities (AAA) BMQ_4689 PF05362 Lon protease (S16) C-terminal proteolytic domain BMQ_4690 PF05362 Lon protease (S16) C-terminal proteolytic domain BMQ_4690 PF00004 ATPase family associated with various cellular activities (AAA) BMQ_4691 PF07724 AAA domain (Cdc48 subfamily) BMQ_4691 PF10431 C-terminal, D2-small domain, of ClpB protein BMQ_4691 PF06689 ClpX C4-type zinc finger BMQ_4692 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BMQ_4692 PF05698 Bacterial trigger factor protein (TF) C-terminus BMQ_4692 PF05697 Bacterial trigger factor protein (TF) BMQ_4694 PF00694 Aconitase C-terminal domain BMQ_4695 PF00330 Aconitase family (aconitate hydratase) BMQ_4696 PF00180 Isocitrate/isopropylmalate dehydrogenase BMQ_4697 PF00682 HMGL-like BMQ_4697 PF08502 LeuA allosteric (dimerisation) domain BMQ_4698 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BMQ_4698 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BMQ_4699 PF01842 ACT domain BMQ_4699 PF10369 Small subunit of acetolactate synthase BMQ_4700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BMQ_4700 PF00205 Thiamine pyrophosphate enzyme, central domain BMQ_4700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BMQ_4702 PF12850 Calcineurin-like phosphoesterase superfamily domain BMQ_4703 PF01725 Ham1 family BMQ_4704 PF03725 3' exoribonuclease family, domain 2 BMQ_4704 PF01138 3' exoribonuclease family, domain 1 BMQ_4705 PF10646 Sporulation and spore germination BMQ_4706 PF01177 Asp/Glu/Hydantoin racemase BMQ_4707 PF01047 MarR family BMQ_4708 PF11724 YvbH-like oligomerisation region BMQ_4708 PF08000 Bacterial PH domain BMQ_4709 PF01384 Phosphate transporter family BMQ_4710 PF01865 Protein of unknown function DUF47 BMQ_4711 PF00905 Penicillin binding protein transpeptidase domain BMQ_4711 PF03717 Penicillin-binding Protein dimerisation domain BMQ_4711 PF05223 NTF2-like N-terminal transpeptidase domain BMQ_4713 PF00296 Luciferase-like monooxygenase BMQ_4714 PF03358 NADPH-dependent FMN reductase BMQ_4715 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_4716 PF09084 NMT1/THI5 like BMQ_4717 PF00005 ABC transporter BMQ_4718 PF00999 Sodium/hydrogen exchanger family BMQ_4719 PF02080 TrkA-C domain BMQ_4721 PF00196 Bacterial regulatory proteins, luxR family BMQ_4722 PF03061 Thioesterase superfamily BMQ_4723 PF13183 4Fe-4S dicluster domain BMQ_4723 PF13085 2Fe-2S iron-sulfur cluster binding domain BMQ_4724 PF02910 Fumarate reductase flavoprotein C-term BMQ_4724 PF00890 FAD binding domain BMQ_4725 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BMQ_4726 PF10702 Protein of unknown function (DUF2507) BMQ_4727 PF00696 Amino acid kinase family BMQ_4727 PF01842 ACT domain BMQ_4727 PF13840 ACT domain BMQ_4728 PF08459 UvrC Helix-hairpin-helix N-terminal BMQ_4728 PF02151 UvrB/uvrC motif BMQ_4728 PF01541 GIY-YIG catalytic domain BMQ_4729 PF00085 Thioredoxin BMQ_4730 PF00766 Electron transfer flavoprotein FAD-binding domain BMQ_4730 PF01012 Electron transfer flavoprotein domain BMQ_4731 PF01012 Electron transfer flavoprotein domain BMQ_4732 PF00378 Enoyl-CoA hydratase/isomerase BMQ_4733 PF00440 Bacterial regulatory proteins, tetR family BMQ_4733 PF08359 YsiA-like protein, C-terminal region BMQ_4734 PF00501 AMP-binding enzyme BMQ_4734 PF13193 AMP-binding enzyme C-terminal domain BMQ_4735 PF01717 Cobalamin-independent synthase, Catalytic domain BMQ_4736 PF03994 Domain of Unknown Function (DUF350) BMQ_4737 PF01713 Smr domain BMQ_4737 PF00488 MutS domain V BMQ_4738 PF14791 DNA polymerase beta thumb BMQ_4738 PF02811 PHP domain BMQ_4738 PF14716 Helix-hairpin-helix domain BMQ_4739 PF02674 Colicin V production protein BMQ_4740 PF05164 Cell division protein ZapA BMQ_4741 PF01351 Ribonuclease HII BMQ_4741 PF11858 Domain of unknown function (DUF3378) BMQ_4742 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BMQ_4742 PF01588 Putative tRNA binding domain BMQ_4742 PF03147 Ferredoxin-fold anticodon binding domain BMQ_4742 PF03483 B3/4 domain BMQ_4742 PF03484 tRNA synthetase B5 domain BMQ_4744 PF00588 SpoU rRNA Methylase family BMQ_4744 PF08032 RNA 2'-O ribose methyltransferase substrate binding BMQ_4745 PF14098 Small, acid-soluble spore protein I BMQ_4746 PF05343 M42 glutamyl aminopeptidase BMQ_4750 PF00453 Ribosomal protein L20 BMQ_4751 PF01632 Ribosomal protein L35 BMQ_4752 PF05198 Translation initiation factor IF-3, N-terminal domain BMQ_4752 PF00707 Translation initiation factor IF-3, C-terminal domain BMQ_4753 PF02824 TGS domain BMQ_4753 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BMQ_4753 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BMQ_4753 PF03129 Anticodon binding domain BMQ_4754 PF08812 YtxC-like family BMQ_4755 PF01695 IstB-like ATP binding protein BMQ_4755 PF07319 Primosomal protein DnaI N-terminus BMQ_4756 PF07261 Replication initiation and membrane attachment BMQ_4757 PF03477 ATP cone domain BMQ_4759 PF02675 S-adenosylmethionine decarboxylase BMQ_4760 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BMQ_4760 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BMQ_4761 PF01121 Dephospho-CoA kinase BMQ_4762 PF02659 Putative manganese efflux pump BMQ_4763 PF06827 Zinc finger found in FPG and IleRS BMQ_4763 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BMQ_4763 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BMQ_4764 PF00476 DNA polymerase family A BMQ_4764 PF01367 5'-3' exonuclease, C-terminal SAM fold BMQ_4764 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BMQ_4765 PF00989 PAS fold BMQ_4765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_4765 PF16736 Single Cache-like BMQ_4765 PF00512 His Kinase A (phospho-acceptor) domain BMQ_4766 PF00486 Transcriptional regulatory protein, C terminal BMQ_4766 PF00072 Response regulator receiver domain BMQ_4768 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BMQ_4768 PF00056 lactate/malate dehydrogenase, NAD binding domain BMQ_4769 PF00180 Isocitrate/isopropylmalate dehydrogenase BMQ_4770 PF00285 Citrate synthase, C-terminal domain BMQ_4771 PF04284 Protein of unknown function (DUF441) BMQ_4772 PF01594 AI-2E family transporter BMQ_4773 PF04186 FxsA cytoplasmic membrane protein BMQ_4774 PF00224 Pyruvate kinase, barrel domain BMQ_4774 PF00391 PEP-utilising enzyme, mobile domain BMQ_4774 PF02887 Pyruvate kinase, alpha/beta domain BMQ_4775 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BMQ_4776 PF17848 Acetyl-coA carboxylase zinc finger domain BMQ_4776 PF01039 Carboxyl transferase domain BMQ_4777 PF00392 Bacterial regulatory proteins, gntR family BMQ_4777 PF07729 FCD domain BMQ_4778 PF00390 Malic enzyme, N-terminal domain BMQ_4778 PF03949 Malic enzyme, NAD binding domain BMQ_4779 PF07733 Bacterial DNA polymerase III alpha NTPase domain BMQ_4779 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BMQ_4779 PF14579 Helix-hairpin-helix motif BMQ_4779 PF02811 PHP domain BMQ_4779 PF01336 OB-fold nucleic acid binding domain BMQ_4780 PF14034 Sporulation protein YtrH BMQ_4782 PF02272 DHHA1 domain BMQ_4782 PF01368 DHH family BMQ_4783 PF14007 YtpI-like protein BMQ_4784 PF00571 CBS domain BMQ_4784 PF00392 Bacterial regulatory proteins, gntR family BMQ_4784 PF07085 DRTGG domain BMQ_4784 PF03061 Thioesterase superfamily BMQ_4787 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BMQ_4787 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BMQ_4789 PF14698 Argininosuccinate lyase C-terminal BMQ_4789 PF00206 Lyase BMQ_4790 PF00764 Arginosuccinate synthase BMQ_4793 PF00871 Acetokinase family BMQ_4794 PF02384 N-6 DNA Methylase BMQ_4795 PF08534 Redoxin BMQ_4796 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BMQ_4797 PF11167 Protein of unknown function (DUF2953) BMQ_4798 PF06271 RDD family BMQ_4799 PF01343 Peptidase family S49 BMQ_4800 PF01513 ATP-NAD kinase BMQ_4801 PF07969 Amidohydrolase family BMQ_4802 PF00269 Small, acid-soluble spore proteins, alpha/beta type BMQ_4803 PF02568 Thiamine biosynthesis protein (ThiI) BMQ_4803 PF02926 THUMP domain BMQ_4804 PF00266 Aminotransferase class-V BMQ_4805 PF06160 Septation ring formation regulator, EzrA BMQ_4806 PF02811 PHP domain BMQ_4807 PF00440 Bacterial regulatory proteins, tetR family BMQ_4808 PF13185 GAF domain BMQ_4810 PF01479 S4 domain BMQ_4810 PF00163 Ribosomal protein S4/S9 N-terminal domain BMQ_4811 PF00579 tRNA synthetases class I (W and Y) BMQ_4811 PF01479 S4 domain BMQ_4812 PF13193 AMP-binding enzyme C-terminal domain BMQ_4812 PF00501 AMP-binding enzyme BMQ_4813 PF00583 Acetyltransferase (GNAT) family BMQ_4814 PF00571 CBS domain BMQ_4815 PF00850 Histone deacetylase domain BMQ_4816 PF00691 OmpA family BMQ_4816 PF13677 Membrane MotB of proton-channel complex MotA/MotB BMQ_4817 PF01618 MotA/TolQ/ExbB proton channel family BMQ_4818 PF00356 Bacterial regulatory proteins, lacI family BMQ_4819 PF00793 DAHP synthetase I family BMQ_4819 PF01817 Chorismate mutase type II BMQ_4820 PF11009 Protein of unknown function (DUF2847) BMQ_4821 PF12732 YtxH-like protein BMQ_4823 PF02073 Thermophilic metalloprotease (M29) BMQ_4824 PF02875 Mur ligase family, glutamate ligase domain BMQ_4824 PF01225 Mur ligase family, catalytic domain BMQ_4824 PF08245 Mur ligase middle domain BMQ_4826 PF01580 FtsK/SpoIIIE family BMQ_4826 PF09397 Ftsk gamma domain BMQ_4826 PF17854 FtsK alpha domain BMQ_4827 PF14794 Domain of unknown function (DUF4479) BMQ_4827 PF01588 Putative tRNA binding domain BMQ_4828 PF07285 Protein of unknown function (DUF1444) BMQ_4829 PF00085 Thioredoxin BMQ_4830 PF01931 Protein of unknown function DUF84 BMQ_4831 PF05343 M42 glutamyl aminopeptidase BMQ_4832 PF03413 Peptidase propeptide and YPEB domain BMQ_4833 PF00753 Metallo-beta-lactamase superfamily BMQ_4834 PF02390 Putative methyltransferase BMQ_4835 PF14165 YtzH-like protein BMQ_4836 PF01636 Phosphotransferase enzyme family BMQ_4837 PF00128 Alpha amylase, catalytic domain BMQ_4837 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BMQ_4837 PF17999 Pullulanase N1-terminal domain BMQ_4840 PF00291 Pyridoxal-phosphate dependent enzyme BMQ_4841 PF01546 Peptidase family M20/M25/M40 BMQ_4842 PF08220 DeoR-like helix-turn-helix domain BMQ_4843 PF00849 RNA pseudouridylate synthase BMQ_4843 PF01479 S4 domain BMQ_4844 PF01943 Polysaccharide biosynthesis protein BMQ_4844 PF14667 Polysaccharide biosynthesis C-terminal domain BMQ_4847 PF00581 Rhodanese-like domain BMQ_4848 PF00133 tRNA synthetases class I (I, L, M and V) BMQ_4848 PF13603 Leucyl-tRNA synthetase, Domain 2 BMQ_4848 PF08264 Anticodon-binding domain of tRNA BMQ_4848 PF09334 tRNA synthetases class I (M) BMQ_4851 PF07690 Major Facilitator Superfamily BMQ_4853 PF10732 Protein of unknown function (DUF2524) BMQ_4854 PF04055 Radical SAM superfamily BMQ_4854 PF16199 Radical_SAM C-terminal domain BMQ_4855 PF06962 Putative rRNA methylase BMQ_4856 PF10776 Protein of unknown function (DUF2600) BMQ_4857 PF12146 Serine aminopeptidase, S33 BMQ_4858 PF00132 Bacterial transferase hexapeptide (six repeats) BMQ_4859 PF01569 PAP2 superfamily BMQ_4860 PF00534 Glycosyl transferases group 1 BMQ_4860 PF13439 Glycosyltransferase Family 4 BMQ_4861 PF02773 S-adenosylmethionine synthetase, C-terminal domain BMQ_4861 PF00438 S-adenosylmethionine synthetase, N-terminal domain BMQ_4861 PF02772 S-adenosylmethionine synthetase, central domain BMQ_4862 PF01293 Phosphoenolpyruvate carboxykinase BMQ_4863 PF10763 Protein of unknown function (DUF2584) BMQ_4864 PF00326 Prolyl oligopeptidase family BMQ_4866 PF00005 ABC transporter BMQ_4867 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_4868 PF00293 NUDIX domain BMQ_4870 PF05105 Bacteriophage holin family BMQ_4871 PF00210 Ferritin-like domain BMQ_4872 PF02664 S-Ribosylhomocysteinase (LuxS) BMQ_4873 PF01809 Putative membrane protein insertion efficiency factor BMQ_4874 PF00484 Carbonic anhydrase BMQ_4875 PF02492 CobW/HypB/UreG, nucleotide-binding domain BMQ_4875 PF07683 Cobalamin synthesis protein cobW C-terminal domain BMQ_4876 PF01297 Zinc-uptake complex component A periplasmic BMQ_4876 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BMQ_4877 PF01197 Ribosomal protein L31 BMQ_4878 PF01654 Cytochrome bd terminal oxidase subunit I BMQ_4879 PF02322 Cytochrome bd terminal oxidase subunit II BMQ_4880 PF00258 Flavodoxin BMQ_4883 PF07561 Domain of Unknown Function (DUF1540) BMQ_4885 PF00268 Ribonucleotide reductase, small chain BMQ_4886 PF00317 Ribonucleotide reductase, all-alpha domain BMQ_4886 PF02867 Ribonucleotide reductase, barrel domain BMQ_4886 PF03477 ATP cone domain BMQ_4887 PF13378 Enolase C-terminal domain-like BMQ_4887 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BMQ_4888 PF13193 AMP-binding enzyme C-terminal domain BMQ_4888 PF00501 AMP-binding enzyme BMQ_4889 PF00378 Enoyl-CoA hydratase/isomerase BMQ_4890 PF00561 alpha/beta hydrolase fold BMQ_4891 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BMQ_4891 PF16582 Middle domain of thiamine pyrophosphate BMQ_4891 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BMQ_4892 PF00425 chorismate binding enzyme BMQ_4893 PF01258 Prokaryotic dksA/traR C4-type zinc finger BMQ_4895 PF00343 Carbohydrate phosphorylase BMQ_4896 PF00534 Glycosyl transferases group 1 BMQ_4896 PF08323 Starch synthase catalytic domain BMQ_4897 PF00483 Nucleotidyl transferase BMQ_4899 PF00128 Alpha amylase, catalytic domain BMQ_4899 PF02806 Alpha amylase, C-terminal all-beta domain BMQ_4899 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BMQ_4924 PF13193 AMP-binding enzyme C-terminal domain BMQ_4924 PF00501 AMP-binding enzyme BMQ_4925 PF02308 MgtC family BMQ_4926 PF14824 Sirohaem biosynthesis protein central BMQ_4927 PF01903 CbiX BMQ_4928 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BMQ_4930 PF14306 PUA-like domain BMQ_4930 PF01747 ATP-sulfurylase BMQ_4931 PF01384 Phosphate transporter family BMQ_4932 PF01507 Phosphoadenosine phosphosulfate reductase family BMQ_4933 PF10372 Bacterial membrane-spanning protein N-terminus BMQ_4933 PF02457 DisA bacterial checkpoint controller nucleotide-binding BMQ_4934 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BMQ_4935 PF02254 TrkA-N domain BMQ_4935 PF07885 Ion channel BMQ_4936 PF08868 YugN-like family BMQ_4937 PF00342 Phosphoglucose isomerase BMQ_4938 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BMQ_4938 PF00361 Proton-conducting membrane transporter BMQ_4938 PF13244 Domain of unknown function (DUF4040) BMQ_4939 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BMQ_4940 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BMQ_4941 PF00361 Proton-conducting membrane transporter BMQ_4942 PF01899 Na+/H+ ion antiporter subunit BMQ_4943 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BMQ_4944 PF03334 Na+/H+ antiporter subunit BMQ_4945 PF00465 Iron-containing alcohol dehydrogenase BMQ_4946 PF04070 Domain of unknown function (DUF378) BMQ_4947 PF00575 S1 RNA binding domain BMQ_4948 PF00155 Aminotransferase class I and II BMQ_4949 PF01037 Lrp/AsnC ligand binding domain BMQ_4950 PF00561 alpha/beta hydrolase fold BMQ_4950 PF08386 TAP-like protein BMQ_4951 PF00155 Aminotransferase class I and II BMQ_4952 PF00080 Copper/zinc superoxide dismutase (SODC) BMQ_4954 PF08810 Kinase associated protein B BMQ_4955 PF00929 Exonuclease BMQ_4956 PF03061 Thioesterase superfamily BMQ_4958 PF01966 HD domain BMQ_4960 PF13726 Na+-H+ antiporter family BMQ_4960 PF03553 Na+/H+ antiporter family BMQ_4961 PF00883 Cytosol aminopeptidase family, catalytic domain BMQ_4961 PF02789 Cytosol aminopeptidase family, N-terminal domain BMQ_4962 PF02681 Divergent PAP2 family BMQ_4963 PF06725 3D domain BMQ_4964 PF14068 Putative membrane protein BMQ_4965 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMQ_4966 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMQ_4968 PF01521 Iron-sulphur cluster biosynthesis BMQ_4969 PF01678 Diaminopimelate epimerase BMQ_4970 PF07293 Protein of unknown function (DUF1450) BMQ_4971 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMQ_4972 PF07315 Protein of unknown function (DUF1462) BMQ_4973 PF01106 NifU-like domain BMQ_4974 PF08544 GHMP kinases C terminal BMQ_4974 PF00288 GHMP kinases N terminal domain BMQ_4975 PF00291 Pyridoxal-phosphate dependent enzyme BMQ_4976 PF03447 Homoserine dehydrogenase, NAD binding domain BMQ_4976 PF01842 ACT domain BMQ_4976 PF00742 Homoserine dehydrogenase BMQ_4977 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BMQ_4977 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BMQ_4979 PF04608 Phosphatidylglycerophosphatase A BMQ_4980 PF13344 Haloacid dehalogenase-like hydrolase BMQ_4981 PF01934 Protein of unknown function DUF86 BMQ_4983 PF06265 Protein of unknown function (DUF1027) BMQ_4984 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BMQ_4985 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BMQ_4985 PF04055 Radical SAM superfamily BMQ_4986 PF01551 Peptidase family M23 BMQ_4987 PF00209 Sodium:neurotransmitter symporter family BMQ_4988 PF09560 Sporulation protein YunB (Spo_YunB) BMQ_4989 PF08827 Domain of unknown function (DUF1805) BMQ_4990 PF01904 Protein of unknown function DUF72 BMQ_4991 PF01458 Uncharacterized protein family (UPF0051) BMQ_4992 PF01592 NifU-like N terminal domain BMQ_4993 PF00266 Aminotransferase class-V BMQ_4994 PF01458 Uncharacterized protein family (UPF0051) BMQ_4995 PF00005 ABC transporter BMQ_4996 PF02627 Carboxymuconolactone decarboxylase family BMQ_4997 PF03180 NLPA lipoprotein BMQ_4998 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_4999 PF00005 ABC transporter BMQ_4999 PF09383 NIL domain BMQ_5000 PF00085 Thioredoxin BMQ_5001 PF01751 Toprim domain BMQ_5003 PF01597 Glycine cleavage H-protein BMQ_5004 PF03960 ArsC family BMQ_5005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BMQ_5005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BMQ_5005 PF02770 Acyl-CoA dehydrogenase, middle domain BMQ_5006 PF00108 Thiolase, N-terminal domain BMQ_5006 PF02803 Thiolase, C-terminal domain BMQ_5007 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BMQ_5007 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BMQ_5007 PF00378 Enoyl-CoA hydratase/isomerase BMQ_5008 PF14115 YuzL-like protein BMQ_5009 PF01619 Proline dehydrogenase BMQ_5010 PF10835 Protein of unknown function (DUF2573) BMQ_5012 PF00005 ABC transporter BMQ_5013 PF01032 FecCD transport family BMQ_5014 PF01032 FecCD transport family BMQ_5015 PF01497 Periplasmic binding protein BMQ_5016 PF13217 Protein of unknown function (DUF4025) BMQ_5017 PF00873 AcrB/AcrD/AcrF family BMQ_5018 PF00440 Bacterial regulatory proteins, tetR family BMQ_5021 PF07690 Major Facilitator Superfamily BMQ_5022 PF02525 Flavodoxin-like fold BMQ_5023 PF00672 HAMP domain BMQ_5023 PF00512 His Kinase A (phospho-acceptor) domain BMQ_5023 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_5024 PF00486 Transcriptional regulatory protein, C terminal BMQ_5024 PF00072 Response regulator receiver domain BMQ_5025 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BMQ_5026 PF01569 PAP2 superfamily BMQ_5027 PF01047 MarR family BMQ_5028 PF00881 Nitroreductase family BMQ_5029 PF02597 ThiS family BMQ_5030 PF02391 MoaE protein BMQ_5031 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BMQ_5032 PF03453 MoeA N-terminal region (domain I and II) BMQ_5032 PF00994 Probable molybdopterin binding domain BMQ_5032 PF03454 MoeA C-terminal region (domain IV) BMQ_5033 PF00899 ThiF family BMQ_5034 PF12804 MobA-like NTP transferase domain BMQ_5035 PF04055 Radical SAM superfamily BMQ_5035 PF06463 Molybdenum Cofactor Synthesis C BMQ_5036 PF02634 FdhD/NarQ family BMQ_5037 PF10057 Uncharacterized conserved protein (DUF2294) BMQ_5038 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BMQ_5038 PF00384 Molybdopterin oxidoreductase BMQ_5038 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BMQ_5038 PF00037 4Fe-4S binding domain BMQ_5038 PF01568 Molydopterin dinucleotide binding domain BMQ_5039 PF07849 Protein of unknown function (DUF1641) BMQ_5041 PF00528 Binding-protein-dependent transport system inner membrane component BMQ_5042 PF01668 SmpB protein BMQ_5043 PF00773 RNB domain BMQ_5043 PF08206 Ribonuclease B OB domain BMQ_5043 PF17876 Cold shock domain BMQ_5043 PF00575 S1 RNA binding domain BMQ_5044 PF12146 Serine aminopeptidase, S33 BMQ_5045 PF03840 Preprotein translocase SecG subunit BMQ_5046 PF03952 Enolase, N-terminal domain BMQ_5046 PF00113 Enolase, C-terminal TIM barrel domain BMQ_5047 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BMQ_5047 PF01676 Metalloenzyme superfamily BMQ_5048 PF00121 Triosephosphate isomerase BMQ_5049 PF00162 Phosphoglycerate kinase BMQ_5050 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BMQ_5050 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BMQ_5051 PF04198 Putative sugar-binding domain BMQ_5053 PF04963 Sigma-54 factor, core binding domain BMQ_5053 PF00309 Sigma-54 factor, Activator interacting domain (AID) BMQ_5053 PF04552 Sigma-54, DNA binding domain BMQ_5056 PF00574 Clp protease BMQ_5057 PF00381 PTS HPr component phosphorylation site BMQ_5058 PF14527 WhiA LAGLIDADG-like domain BMQ_5058 PF10298 WhiA N-terminal LAGLIDADG-like domain BMQ_5058 PF02650 WhiA C-terminal HTH domain BMQ_5059 PF01933 Uncharacterised protein family UPF0052 BMQ_5060 PF03668 P-loop ATPase protein family BMQ_5061 PF00293 NUDIX domain BMQ_5062 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMQ_5064 PF01502 Phosphoribosyl-AMP cyclohydrolase BMQ_5064 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BMQ_5065 PF00977 Histidine biosynthesis protein BMQ_5066 PF00977 Histidine biosynthesis protein BMQ_5067 PF00117 Glutamine amidotransferase class-I BMQ_5068 PF00475 Imidazoleglycerol-phosphate dehydratase BMQ_5069 PF00815 Histidinol dehydrogenase BMQ_5070 PF01634 ATP phosphoribosyltransferase BMQ_5071 PF13393 Histidyl-tRNA synthetase BMQ_5072 PF14602 Hexapeptide repeat of succinyl-transferase BMQ_5073 PF13419 Haloacid dehalogenase-like hydrolase BMQ_5074 PF01790 Prolipoprotein diacylglyceryl transferase BMQ_5075 PF02603 HPr Serine kinase N terminus BMQ_5075 PF07475 HPr Serine kinase C-terminal domain BMQ_5076 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BMQ_5078 PF13349 Putative adhesin BMQ_5080 PF00005 ABC transporter BMQ_5080 PF17760 UvrA interaction domain BMQ_5080 PF17755 UvrA DNA-binding domain BMQ_5081 PF00271 Helicase conserved C-terminal domain BMQ_5081 PF04851 Type III restriction enzyme, res subunit BMQ_5081 PF12344 Ultra-violet resistance protein B BMQ_5081 PF17757 UvrB interaction domain BMQ_5081 PF02151 UvrB/uvrC motif BMQ_5082 PF02954 Bacterial regulatory protein, Fis family BMQ_5082 PF00158 Sigma-54 interaction domain BMQ_5082 PF00072 Response regulator receiver domain BMQ_5083 PF00171 Aldehyde dehydrogenase family BMQ_5084 PF01619 Proline dehydrogenase BMQ_5085 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) BMQ_5086 PF17820 PDZ domain BMQ_5087 PF01471 Putative peptidoglycan binding domain BMQ_5087 PF03572 Peptidase family S41 BMQ_5087 PF17820 PDZ domain BMQ_5088 PF08525 Opacity-associated protein A N-terminal motif BMQ_5088 PF01476 LysM domain BMQ_5088 PF01551 Peptidase family M23 BMQ_5089 PF02687 FtsX-like permease family BMQ_5089 PF18075 FtsX extracellular domain BMQ_5090 PF00005 ABC transporter BMQ_5091 PF03358 NADPH-dependent FMN reductase BMQ_5092 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BMQ_5093 PF00902 Sec-independent protein translocase protein (TatC) BMQ_5094 PF02416 mttA/Hcf106 family BMQ_5095 PF09423 PhoD-like phosphatase BMQ_5095 PF16655 PhoD-like phosphatase, N-terminal domain BMQ_5096 PF03462 PCRF domain BMQ_5096 PF00472 RF-1 domain BMQ_5097 PF02810 SEC-C motif BMQ_5097 PF01043 SecA preprotein cross-linking domain BMQ_5097 PF07516 SecA Wing and Scaffold domain BMQ_5097 PF07517 SecA DEAD-like domain BMQ_5098 PF00583 Acetyltransferase (GNAT) family BMQ_5098 PF09500 Putative thioesterase (yiiD_Cterm) BMQ_5099 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BMQ_5099 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BMQ_5101 PF02561 Flagellar protein FliS BMQ_5102 PF02465 Flagellar hook-associated protein 2 N-terminus BMQ_5102 PF07195 Flagellar hook-associated protein 2 C-terminus BMQ_5102 PF07196 Flagellin hook IN motif BMQ_5104 PF00324 Amino acid permease BMQ_5107 PF00465 Iron-containing alcohol dehydrogenase BMQ_5109 PF02599 Global regulator protein family BMQ_5110 PF02623 FliW protein BMQ_5111 PF00669 Bacterial flagellin N-terminal helical region BMQ_5111 PF00700 Bacterial flagellin C-terminal helical region BMQ_5112 PF00460 Flagella basal body rod protein BMQ_5112 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BMQ_5117 PF04851 Type III restriction enzyme, res subunit BMQ_5117 PF00271 Helicase conserved C-terminal domain BMQ_5118 PF02645 Uncharacterised protein, DegV family COG1307 BMQ_5119 PF03885 Protein of unknown function (DUF327) BMQ_5121 PF00072 Response regulator receiver domain BMQ_5121 PF00196 Bacterial regulatory proteins, luxR family BMQ_5122 PF05384 Sensor protein DegS BMQ_5122 PF07730 Histidine kinase BMQ_5122 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_5123 PF09186 Domain of unknown function (DUF1949) BMQ_5123 PF01205 Uncharacterized protein family UPF0029 BMQ_5124 PF03816 Cell envelope-related transcriptional attenuator domain BMQ_5125 PF00953 Glycosyl transferase family 4 BMQ_5127 PF15975 Flotillin BMQ_5127 PF01145 SPFH domain / Band 7 family BMQ_5128 PF03808 Glycosyl transferase WecB/TagA/CpsF family BMQ_5129 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BMQ_5129 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BMQ_5129 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BMQ_5130 PF00483 Nucleotidyl transferase BMQ_5132 PF00271 Helicase conserved C-terminal domain BMQ_5132 PF12419 SNF2 Helicase protein BMQ_5132 PF00176 SNF2 family N-terminal domain BMQ_5133 PF00877 NlpC/P60 family BMQ_5133 PF01476 LysM domain BMQ_5134 PF00436 Single-strand binding protein family BMQ_5135 PF14183 YwpF-like protein BMQ_5136 PF01381 Helix-turn-helix BMQ_5137 PF07977 FabA-like domain BMQ_5138 PF00460 Flagella basal body rod protein BMQ_5138 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BMQ_5139 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BMQ_5139 PF00460 Flagella basal body rod protein BMQ_5141 PF12116 Stage III sporulation protein D BMQ_5142 PF01551 Peptidase family M23 BMQ_5143 PF08486 Stage II sporulation protein BMQ_5144 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BMQ_5146 PF06612 Protein of unknown function (DUF1146) BMQ_5147 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BMQ_5147 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BMQ_5148 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BMQ_5148 PF02874 ATP synthase alpha/beta family, beta-barrel domain BMQ_5149 PF00231 ATP synthase BMQ_5150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BMQ_5150 PF00306 ATP synthase alpha/beta chain, C terminal domain BMQ_5150 PF02874 ATP synthase alpha/beta family, beta-barrel domain BMQ_5151 PF00213 ATP synthase delta (OSCP) subunit BMQ_5152 PF00430 ATP synthase B/B' CF(0) BMQ_5153 PF00137 ATP synthase subunit C BMQ_5154 PF00119 ATP synthase A chain BMQ_5155 PF03899 ATP synthase I chain BMQ_5157 PF00082 Subtilase family BMQ_5157 PF02225 PA domain BMQ_5157 PF13860 FlgD Ig-like domain BMQ_5157 PF05922 Peptidase inhibitor I9 BMQ_5158 PF02350 UDP-N-acetylglucosamine 2-epimerase BMQ_5160 PF00464 Serine hydroxymethyltransferase BMQ_5161 PF04260 Protein of unknown function (DUF436) BMQ_5162 PF02502 Ribose/Galactose Isomerase BMQ_5163 PF01451 Low molecular weight phosphotyrosine protein phosphatase BMQ_5164 PF02659 Putative manganese efflux pump BMQ_5165 PF01300 Telomere recombination BMQ_5165 PF03481 Putative GTP-binding controlling metal-binding BMQ_5167 PF09551 Stage II sporulation protein R (spore_II_R) BMQ_5168 PF17827 PrmC N-terminal domain BMQ_5168 PF13847 Methyltransferase domain BMQ_5169 PF00472 RF-1 domain BMQ_5169 PF03462 PCRF domain BMQ_5170 PF00265 Thymidine kinase BMQ_5171 PF01197 Ribosomal protein L31 BMQ_5172 PF07497 Rho termination factor, RNA-binding domain BMQ_5172 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BMQ_5172 PF07498 Rho termination factor, N-terminal domain BMQ_5173 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BMQ_5174 PF00923 Transaldolase/Fructose-6-phosphate aldolase BMQ_5175 PF01116 Fructose-bisphosphate aldolase class-II BMQ_5176 PF00072 Response regulator receiver domain BMQ_5177 PF10740 Domain of unknown function (DUF2529) BMQ_5178 PF06418 CTP synthase N-terminus BMQ_5178 PF00117 Glutamine amidotransferase class-I BMQ_5179 PF05066 HB1, ASXL, restriction endonuclease HTH domain BMQ_5180 PF01642 Methylmalonyl-CoA mutase BMQ_5180 PF02310 B12 binding domain BMQ_5182 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BMQ_5182 PF02770 Acyl-CoA dehydrogenase, middle domain BMQ_5182 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BMQ_5183 PF02770 Acyl-CoA dehydrogenase, middle domain BMQ_5183 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BMQ_5183 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BMQ_5184 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BMQ_5184 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BMQ_5185 PF02803 Thiolase, C-terminal domain BMQ_5185 PF00108 Thiolase, N-terminal domain BMQ_5186 PF13183 4Fe-4S dicluster domain BMQ_5186 PF02754 Cysteine-rich domain BMQ_5187 PF13091 PLD-like domain BMQ_5189 PF00750 tRNA synthetases class I (R) BMQ_5189 PF05746 DALR anticodon binding domain BMQ_5189 PF03485 Arginyl tRNA synthetase N terminal domain BMQ_5190 PF09148 Domain of unknown function (DUF1934) BMQ_5191 PF00491 Arginase family BMQ_5192 PF17284 Spermidine synthase tetramerisation domain BMQ_5193 PF00905 Penicillin binding protein transpeptidase domain BMQ_5193 PF00912 Transglycosylase BMQ_5194 PF08741 YwhD family BMQ_5195 PF02163 Peptidase family M50 BMQ_5196 PF01361 Tautomerase enzyme BMQ_5198 PF01966 HD domain BMQ_5199 PF07293 Protein of unknown function (DUF1450) BMQ_5201 PF03099 Biotin/lipoate A/B protein ligase family BMQ_5202 PF01515 Phosphate acetyl/butaryl transferase BMQ_5205 PF09671 Spore coat protein (Spore_GerQ) BMQ_5206 PF04241 Protein of unknown function (DUF423) BMQ_5208 PF03167 Uracil DNA glycosylase superfamily BMQ_5210 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BMQ_5210 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BMQ_5211 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BMQ_5211 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BMQ_5212 PF06018 CodY GAF-like domain BMQ_5212 PF13556 PucR C-terminal helix-turn-helix domain BMQ_5212 PF17853 GGDEF-like domain BMQ_5213 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BMQ_5213 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BMQ_5215 PF08543 Phosphomethylpyrimidine kinase BMQ_5217 PF13419 Haloacid dehalogenase-like hydrolase BMQ_5218 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BMQ_5218 PF00367 phosphotransferase system, EIIB BMQ_5218 PF02378 Phosphotransferase system, EIIC BMQ_5219 PF03372 Endonuclease/Exonuclease/phosphatase family BMQ_5220 PF00534 Glycosyl transferases group 1 BMQ_5220 PF13439 Glycosyltransferase Family 4 BMQ_5223 PF00892 EamA-like transporter family BMQ_5225 PF03023 Lipid II flippase MurJ BMQ_5228 PF00664 ABC transporter transmembrane region BMQ_5228 PF00005 ABC transporter BMQ_5229 PF00005 ABC transporter BMQ_5229 PF00664 ABC transporter transmembrane region BMQ_5230 PF02322 Cytochrome bd terminal oxidase subunit II BMQ_5231 PF01654 Cytochrome bd terminal oxidase subunit I BMQ_5232 PF12821 Threonine/Serine exporter, ThrE BMQ_5233 PF06738 Putative threonine/serine exporter BMQ_5234 PF00356 Bacterial regulatory proteins, lacI family BMQ_5236 PF00083 Sugar (and other) transporter BMQ_5237 PF00171 Aldehyde dehydrogenase family BMQ_5238 PF00696 Amino acid kinase family BMQ_5239 PF13722 5TM C-terminal transporter carbon starvation CstA BMQ_5239 PF02554 Carbon starvation protein CstA BMQ_5240 PF00199 Catalase BMQ_5240 PF06628 Catalase-related immune-responsive BMQ_5241 PF00128 Alpha amylase, catalytic domain BMQ_5241 PF09154 Domain of unknown function (DUF1939) BMQ_5242 PF00939 Sodium:sulfate symporter transmembrane region BMQ_5243 PF17785 PUA-like domain BMQ_5243 PF10672 S-adenosylmethionine-dependent methyltransferase BMQ_5245 PF00072 Response regulator receiver domain BMQ_5245 PF00486 Transcriptional regulatory protein, C terminal BMQ_5246 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_5246 PF00512 His Kinase A (phospho-acceptor) domain BMQ_5246 PF00989 PAS fold BMQ_5246 PF16736 Single Cache-like BMQ_5249 PF01207 Dihydrouridine synthase (Dus) BMQ_5250 PF02590 Predicted SPOUT methyltransferase BMQ_5252 PF13180 PDZ domain BMQ_5253 PF00753 Metallo-beta-lactamase superfamily BMQ_5254 PF09648 YycH protein BMQ_5256 PF00672 HAMP domain BMQ_5256 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_5256 PF00512 His Kinase A (phospho-acceptor) domain BMQ_5256 PF13426 PAS domain BMQ_5257 PF00486 Transcriptional regulatory protein, C terminal BMQ_5257 PF00072 Response regulator receiver domain BMQ_5262 PF00709 Adenylosuccinate synthetase BMQ_5263 PF03796 DnaB-like helicase C terminal domain BMQ_5263 PF00772 DnaB-like helicase N terminal domain BMQ_5264 PF01281 Ribosomal protein L9, N-terminal domain BMQ_5264 PF03948 Ribosomal protein L9, C-terminal domain BMQ_5265 PF01368 DHH family BMQ_5265 PF02272 DHHA1 domain BMQ_5267 PF01084 Ribosomal protein S18 BMQ_5268 PF00436 Single-strand binding protein family BMQ_5269 PF01250 Ribosomal protein S6 BMQ_5270 PF01926 50S ribosome-binding GTPase BMQ_5270 PF06071 Protein of unknown function (DUF933) BMQ_5271 PF06107 Bacterial protein of unknown function (DUF951) BMQ_5272 PF00924 Mechanosensitive ion channel BMQ_5274 PF06866 Protein of unknown function (DUF1256) BMQ_5275 PF02195 ParB-like nuclease domain BMQ_5275 PF17762 HTH domain found in ParB protein BMQ_5276 PF13614 AAA domain BMQ_5277 PF17762 HTH domain found in ParB protein BMQ_5277 PF02195 ParB-like nuclease domain BMQ_5278 PF02527 rRNA small subunit methyltransferase G BMQ_5279 PF13932 GidA associated domain BMQ_5279 PF01134 Glucose inhibited division protein A BMQ_5280 PF10396 GTP-binding protein TrmE N-terminus BMQ_5280 PF12631 MnmE helical domain BMQ_5280 PF01926 50S ribosome-binding GTPase BMQ_5281 PF01424 R3H domain BMQ_5281 PF14804 Jag N-terminus BMQ_5282 PF02096 60Kd inner membrane protein BMQ_5283 PF00825 Ribonuclease P BMQ_5284 PF00468 Ribosomal protein L34 BMQ_pBM20005 PF03432 Relaxase/Mobilisation nuclease domain BMQ_pBM30005 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BMQ_pBM30005 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BMQ_pBM30016 PF01076 Plasmid recombination enzyme BMQ_pBM30037 PF01443 Viral (Superfamily 1) RNA helicase BMQ_pBM30037 PF03389 MobA/MobL family BMQ_pBM30037 PF17841 BID domain of Bartonella effector protein (Bep) BMQ_pBM40012 PF04234 CopC domain BMQ_pBM40012 PF05425 Copper resistance protein D BMQ_pBM40012 PF13115 YtkA-like BMQ_pBM40013 PF07987 Domain of unkown function (DUF1775) BMQ_pBM40014 PF09323 Domain of unknown function (DUF1980) BMQ_pBM40015 PF03773 Predicted permease BMQ_pBM40018 PF03773 Predicted permease BMQ_pBM40020 PF00872 Transposase, Mutator family BMQ_pBM40023 PF00403 Heavy-metal-associated domain BMQ_pBM40030 PF07486 Cell Wall Hydrolase BMQ_pBM40033 PF17854 FtsK alpha domain BMQ_pBM40033 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BMQ_pBM40033 PF01580 FtsK/SpoIIIE family BMQ_pBM40033 PF09397 Ftsk gamma domain BMQ_pBM40039 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BMQ_pBM40042 PF01740 STAS domain BMQ_pBM40042 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BMQ_pBM40045 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BMQ_pBM40047 PF14172 Domain of unknown function (DUF4309) BMQ_pBM40051 PF08864 UPF0302 domain BMQ_pBM40051 PF08858 IDEAL domain BMQ_pBM50008 PF00067 Cytochrome P450 BMQ_pBM50010 PF17854 FtsK alpha domain BMQ_pBM50010 PF01580 FtsK/SpoIIIE family BMQ_pBM50010 PF09397 Ftsk gamma domain BMQ_pBM50017 PF00440 Bacterial regulatory proteins, tetR family BMQ_pBM50019 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BMQ_pBM50021 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMQ_pBM50021 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BMQ_pBM50027 PF01381 Helix-turn-helix BMQ_pBM50045 PF07690 Major Facilitator Superfamily BMQ_pBM50048 PF02801 Beta-ketoacyl synthase, C-terminal domain BMQ_pBM50048 PF00109 Beta-ketoacyl synthase, N-terminal domain BMQ_pBM50049 PF08669 Glycine cleavage T-protein C-terminal barrel domain BMQ_pBM50049 PF01571 Aminomethyltransferase folate-binding domain BMQ_pBM50051 PF00550 Phosphopantetheine attachment site BMQ_pBM50053 PF00698 Acyl transferase domain BMQ_pBM50054 PF01648 4'-phosphopantetheinyl transferase superfamily BMQ_pBM50059 PF07690 Major Facilitator Superfamily BMQ_pBM50060 PF01022 Bacterial regulatory protein, arsR family BMQ_pBM50063 PF01588 Putative tRNA binding domain BMQ_pBM50064 PF00892 EamA-like transporter family BMQ_pBM50069 PF00082 Subtilase family BMQ_pBM50075 PF00535 Glycosyl transferase family 2 BMQ_pBM50076 PF00535 Glycosyl transferase family 2 BMQ_pBM50090 PF08281 Sigma-70, region 4 BMQ_pBM50090 PF04542 Sigma-70 region 2 BMQ_pBM60001 PF01051 Initiator Replication protein BMQ_pBM60006 PF00082 Subtilase family BMQ_pBM60009 PF02350 UDP-N-acetylglucosamine 2-epimerase BMQ_pBM60010 PF02719 Polysaccharide biosynthesis protein BMQ_pBM60014 PF16363 GDP-mannose 4,6 dehydratase BMQ_pBM60015 PF13439 Glycosyltransferase Family 4 BMQ_pBM60015 PF00534 Glycosyl transferases group 1 BMQ_pBM60017 PF00535 Glycosyl transferase family 2 BMQ_pBM60021 PF00535 Glycosyl transferase family 2 BMQ_pBM60026 PF00535 Glycosyl transferase family 2 BMQ_pBM60029 PF07552 Spore Coat Protein X and V domain BMQ_pBM60034 PF02585 GlcNAc-PI de-N-acetylase BMQ_pBM60040 PF00069 Protein kinase domain BMQ_pBM60044 PF13333 Integrase core domain BMQ_pBM60044 PF00665 Integrase core domain BMQ_pBM60044 PF13276 HTH-like domain BMQ_pBM60050 PF00872 Transposase, Mutator family BMQ_pBM60052 PF01565 FAD binding domain BMQ_pBM60052 PF08031 Berberine and berberine like BMQ_pBM60061 PF00535 Glycosyl transferase family 2 BMQ_pBM60061 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 BMQ_pBM60066 PF00872 Transposase, Mutator family BMQ_pBM60072 PF13333 Integrase core domain BMQ_pBM60072 PF13276 HTH-like domain BMQ_pBM60072 PF00665 Integrase core domain BMQ_pBM60079 PF04239 Protein of unknown function (DUF421) BMQ_pBM60083 PF12833 Helix-turn-helix domain BMQ_pBM60083 PF06445 GyrI-like small molecule binding domain BMQ_pBM60088 PF08892 YqcI/YcgG family BMQ_pBM60093 PF09680 Family of unknown function BMQ_pBM60102 PF00665 Integrase core domain BMQ_pBM60102 PF13276 HTH-like domain BMQ_pBM60102 PF13333 Integrase core domain BMQ_pBM60104 PF14398 YheC/D like ATP-grasp BMQ_pBM70005 PF13021 Domain of unknown function (DUF3885) BMQ_pBM70008 PF01580 FtsK/SpoIIIE family BMQ_pBM70008 PF09397 Ftsk gamma domain BMQ_pBM70008 PF17854 FtsK alpha domain BMQ_pBM70017 PF00005 ABC transporter BMQ_pBM70017 PF13732 Domain of unknown function (DUF4162) BMQ_pBM70019 PF00293 NUDIX domain BMQ_pBM70020 PF13391 HNH endonuclease BMQ_pBM70021 PF03466 LysR substrate binding domain BMQ_pBM70021 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_pBM70022 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BMQ_pBM70022 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BMQ_pBM70024 PF07690 Major Facilitator Superfamily BMQ_pBM70026 PF04239 Protein of unknown function (DUF421) BMQ_pBM70027 PF00313 'Cold-shock' DNA-binding domain BMQ_pBM70028 PF13411 MerR HTH family regulatory protein BMQ_pBM70028 PF07739 TipAS antibiotic-recognition domain BMQ_pBM70029 PF00561 alpha/beta hydrolase fold BMQ_pBM70032 PF01042 Endoribonuclease L-PSP BMQ_pBM70033 PF00291 Pyridoxal-phosphate dependent enzyme BMQ_pBM70034 PF08220 DeoR-like helix-turn-helix domain BMQ_pBM70034 PF00455 DeoR C terminal sensor domain BMQ_pBM70036 PF01261 Xylose isomerase-like TIM barrel BMQ_pBM70037 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BMQ_pBM70037 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMQ_pBM70038 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMQ_pBM70038 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BMQ_pBM70039 PF00083 Sugar (and other) transporter BMQ_pBM70041 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMQ_pBM70041 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BMQ_pBM70042 PF01261 Xylose isomerase-like TIM barrel BMQ_pBM70043 PF12833 Helix-turn-helix domain BMQ_pBM70043 PF02311 AraC-like ligand binding domain BMQ_pBM70048 PF00313 'Cold-shock' DNA-binding domain BMQ_pBM70051 PF08241 Methyltransferase domain BMQ_pBM70052 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BMQ_pBM70053 PF03009 Glycerophosphoryl diester phosphodiesterase family BMQ_pBM70054 PF07690 Major Facilitator Superfamily BMQ_pBM70055 PF07690 Major Facilitator Superfamily BMQ_pBM70057 PF01638 HxlR-like helix-turn-helix BMQ_pBM70058 PF00440 Bacterial regulatory proteins, tetR family BMQ_pBM70060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BMQ_pBM70061 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMQ_pBM70061 PF03466 LysR substrate binding domain BMQ_pBM70062 PF13649 Methyltransferase domain BMQ_pBM70063 PF01209 ubiE/COQ5 methyltransferase family BMQ_pBM70064 PF01553 Acyltransferase BMQ_pBM70065 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BMQ_pBM70065 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BMQ_pBM70070 PF03323 Bacillus/Clostridium GerA spore germination protein BMQ_pBM70071 PF05504 Spore germination B3/ GerAC like, C-terminal BMQ_pBM70072 PF03845 Spore germination protein BMQ_pBM70073 PF03845 Spore germination protein BMQ_pBM70077 PF01740 STAS domain BMQ_pBM70077 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BMQ_pBM70084 PF02028 BCCT, betaine/carnitine/choline family transporter BMQ_pBM70087 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BMQ_pBM70087 PF18277 AbrB C-terminal domain BMQ_pBM70089 PF00582 Universal stress protein family BMQ_pBM70090 PF01740 STAS domain BMQ_pBM70090 PF00916 Sulfate permease family BMQ_pBM70092 PF02796 Helix-turn-helix domain of resolvase BMQ_pBM70092 PF00239 Resolvase, N terminal domain BMQ_pBM70093 PF00999 Sodium/hydrogen exchanger family BMQ_pBM70095 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BMQ_pBM70096 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BMQ_pBM70101 PF03551 Transcriptional regulator PadR-like family BMQ_pBM70104 PF00293 NUDIX domain BMQ_pBM70110 PF13419 Haloacid dehalogenase-like hydrolase BMQ_pBM70112 PF01943 Polysaccharide biosynthesis protein BMQ_pBM70112 PF14667 Polysaccharide biosynthesis C-terminal domain BMQ_pBM70116 PF05163 DinB family BMQ_pBM70119 PF00109 Beta-ketoacyl synthase, N-terminal domain BMQ_pBM70119 PF02801 Beta-ketoacyl synthase, C-terminal domain BMQ_pBM70121 PF11799 impB/mucB/samB family C-terminal domain BMQ_pBM70121 PF00817 impB/mucB/samB family BMQ_pBM70121 PF11798 IMS family HHH motif BMQ_pBM70122 PF00248 Aldo/keto reductase family BMQ_pBM70124 PF06719 AraC-type transcriptional regulator N-terminus BMQ_pBM70124 PF12833 Helix-turn-helix domain BMQ_pBM70125 PF00313 'Cold-shock' DNA-binding domain BMQ_pBM70128 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BMQ_pBM70128 PF18277 AbrB C-terminal domain BMQ_pBM70137 PF00857 Isochorismatase family BMQ_pBM70139 PF00082 Subtilase family BMQ_pBM70140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMQ_pBM70140 PF13426 PAS domain BMQ_pBM70140 PF00512 His Kinase A (phospho-acceptor) domain BMQ_pBM70140 PF00672 HAMP domain BMQ_pBM70141 PF00072 Response regulator receiver domain BMQ_pBM70141 PF00486 Transcriptional regulatory protein, C terminal BMQ_pBM70142 PF02687 FtsX-like permease family BMQ_pBM70143 PF00005 ABC transporter BMQ_pBM70146 PF00005 ABC transporter BMQ_pBM70147 PF02441 Flavoprotein BMQ_pBM70148 PF05147 Lanthionine synthetase C-like protein BMQ_pBM70149 PF00005 ABC transporter BMQ_pBM70150 PF14028 Lantibiotic biosynthesis dehydratase C-term BMQ_pBM70150 PF04738 Lantibiotic dehydratase, N terminus BMQ_pBM70156 PF00196 Bacterial regulatory proteins, luxR family BMQ_pBM70156 PF00072 Response regulator receiver domain BMQ_pBM70158 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BMQ_pBM70158 PF13288 DXP reductoisomerase C-terminal domain BMQ_pBM70158 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BMQ_pBM70160 PF00155 Aminotransferase class I and II BMQ_pBM70164 PF00206 Lyase BMQ_pBM70164 PF02655 ATP-grasp domain BMQ_pBM70165 PF02195 ParB-like nuclease domain BMQ_pBM70167 PF13419 Haloacid dehalogenase-like hydrolase