locus-tag	class	description
BMWSH_0001	COG0230	Belongs to the bacterial ribosomal protein bL34 family
BMWSH_0002	COG0594	ribonuclease P activity
BMWSH_0003	COG0706	membrane insertase activity
BMWSH_0004	COG1847	R3H domain protein
BMWSH_0005	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BMWSH_0006	COG0445	tRNA wobble uridine modification
BMWSH_0008	COG1475	DNA binding
BMWSH_0009	COG1192	Involved in chromosome partitioning
BMWSH_0010	COG1475	DNA binding
BMWSH_0012	COG3949	Membrane
BMWSH_0013	COG0668	transmembrane transport
BMWSH_0014	COG4481	Protein conserved in bacteria
BMWSH_0015	COG0012	GTP binding
BMWSH_0018	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BMWSH_0020	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
BMWSH_0022	COG0305	Participates in initiation and elongation during chromosome replication
BMWSH_0023	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BMWSH_0024	COG0745	RESPONSE REGULATOR receiver
BMWSH_0025	COG5002	protein histidine kinase activity
BMWSH_0027	COG4853	Protein conserved in bacteria
BMWSH_0028	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BMWSH_0029	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BMWSH_0031	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BMWSH_0032	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BMWSH_0034	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BMWSH_0035	COG0471	metal ion transport
BMWSH_0039	COG0753	catalase activity
BMWSH_0040	COG1966	Carbon starvation protein
BMWSH_0043	COG2814	Major facilitator Superfamily
BMWSH_0045	COG1609	Transcriptional regulator
BMWSH_0046	COG2966	Psort location CytoplasmicMembrane, score
BMWSH_0047	COG3610	response to peptide
BMWSH_0048	COG1271	oxidase subunit
BMWSH_0049	COG1294	oxidase, subunit
BMWSH_0050	COG4988	ABC transporter
BMWSH_0051	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BMWSH_0054	COG0728	peptidoglycan biosynthetic process
BMWSH_0056	COG2076	Multidrug Resistance protein
BMWSH_0059	COG0438	transferase activity, transferring glycosyl groups
BMWSH_0061	COG2190	(PTS) system
BMWSH_0061	COG1263	PTS System
BMWSH_0061	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMWSH_0062	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BMWSH_0063	COG0561	phosphatase activity
BMWSH_0064	COG0351	phosphomethylpyrimidine kinase
BMWSH_0066	COG0686	Belongs to the AlaDH PNT family
BMWSH_0067	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
BMWSH_0067	COG2508	Transcriptional regulator
BMWSH_0068	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BMWSH_0069	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BMWSH_0071	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BMWSH_0073	COG2363	Small membrane protein
BMWSH_0075	COG3773	Cell wall hydrolase
BMWSH_0077	COG0280	phosphate acetyltransferase
BMWSH_0078	COG0095	Lipoate-protein ligase
BMWSH_0082	COG4844	belongs to the
BMWSH_0083	COG1078	dGTPase activity
BMWSH_0084	COG3465	dGTPase activity
BMWSH_0085	COG1942	4-Oxalocrotonate Tautomerase
BMWSH_0086	COG1994	Peptidase M50
BMWSH_0088	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BMWSH_0089	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BMWSH_0090	COG0010	Belongs to the arginase family
BMWSH_0091	COG4506	Protein conserved in bacteria
BMWSH_0092	COG0018	arginyl-trna synthetase
BMWSH_0094	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BMWSH_0095	COG0247	lactate metabolic process
BMWSH_0095	COG2181	nitrate reductase activity
BMWSH_0096	COG0183	Belongs to the thiolase family
BMWSH_0097	COG1250	3-hydroxyacyl-CoA dehydrogenase
BMWSH_0098	COG1960	acyl-CoA dehydrogenase activity
BMWSH_0099	COG1960	acyl-CoA dehydrogenase activity
BMWSH_0101	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BMWSH_0101	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BMWSH_0101	COG1703	isobutyryl-CoA mutase activity
BMWSH_0103	COG0504	CTP synthase activity
BMWSH_0104	COG4821	SIS domain
BMWSH_0105	COG2204	response regulator
BMWSH_0106	COG0191	fructose-bisphosphate aldolase activity
BMWSH_0107	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BMWSH_0109	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BMWSH_0112	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BMWSH_0116	COG0009	L-threonylcarbamoyladenylate synthase
BMWSH_0119	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BMWSH_0120	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BMWSH_0121	COG1404	Belongs to the peptidase S8 family
BMWSH_0124	COG0356	it plays a direct role in the translocation of protons across the membrane
BMWSH_0125	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BMWSH_0126	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BMWSH_0127	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BMWSH_0128	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BMWSH_0129	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BMWSH_0130	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BMWSH_0131	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BMWSH_0132	COG4836	Membrane
BMWSH_0135	COG2385	sporulation resulting in formation of a cellular spore
BMWSH_0136	COG0739	heme binding
BMWSH_0137	COG1609	Transcriptional regulator
BMWSH_0138	COG1077	Cell shape determining protein MreB Mrl
BMWSH_0139	COG4786	Flagellar basal body rod
BMWSH_0140	COG4786	Flagellar basal body rod
BMWSH_0141	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BMWSH_0144	COG0629	single-stranded DNA binding
BMWSH_0145	COG1388	LysM domain
BMWSH_0145	COG0791	NLP P60 protein
BMWSH_0146	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BMWSH_0148	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BMWSH_0151	COG2268	Band 7 protein
BMWSH_0152	COG1585	Membrane protein implicated in regulation of membrane protease activity
BMWSH_0153	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BMWSH_0154	COG1316	TRANSCRIPTIONal
BMWSH_0155	COG1739	Uncharacterized protein family UPF0029
BMWSH_0156	COG4585	Histidine kinase
BMWSH_0157	COG2197	response regulator
BMWSH_0159	COG1728	Protein conserved in bacteria
BMWSH_0160	COG1307	EDD domain protein, DegV family
BMWSH_0161	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
BMWSH_0162	COG1040	competence protein
BMWSH_0166	COG1256	bacterial-type flagellum assembly
BMWSH_0166	COG4786	Flagellar basal body rod
BMWSH_0167	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BMWSH_0168	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
BMWSH_0169	COG1510	regulation of RNA biosynthetic process
BMWSH_0170	COG1454	alcohol dehydrogenase
BMWSH_0173	COG1113	amino acid transport
BMWSH_0175	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BMWSH_0176	COG1516	flagellar protein fliS
BMWSH_0178	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BMWSH_0179	COG0456	acetyltransferase
BMWSH_0180	COG0653	protein targeting
BMWSH_0181	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BMWSH_0183	COG3540	Alkaline phosphatase
BMWSH_0184	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BMWSH_0185	COG0805	protein transport
BMWSH_0187	COG0655	NAD(P)H dehydrogenase (quinone) activity
BMWSH_0188	COG2884	Cell division ATP-binding protein ftsE
BMWSH_0189	COG2177	Part of the ABC transporter FtsEX involved in
BMWSH_0190	COG0739	heme binding
BMWSH_0191	COG0793	Belongs to the peptidase S41A family
BMWSH_0191	COG3409	Peptidoglycan-binding domain 1 protein
BMWSH_0192	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BMWSH_0193	COG4897	Protein conserved in bacteria
BMWSH_0194	COG0506	proline dehydrogenase activity
BMWSH_0195	COG2204	response regulator
BMWSH_0196	COG0556	nucleotide-excision repair
BMWSH_0197	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BMWSH_0199	COG3595	metallopeptidase activity
BMWSH_0201	COG1950	PFAM Membrane protein of
BMWSH_0202	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BMWSH_0203	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BMWSH_0204	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
BMWSH_0205	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
BMWSH_0206	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BMWSH_0207	COG0131	Imidazoleglycerol-phosphate dehydratase
BMWSH_0208	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BMWSH_0209	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BMWSH_0210	COG0107	imidazoleglycerol-phosphate synthase activity
BMWSH_0211	COG0140	phosphoribosyl-ATP diphosphatase activity
BMWSH_0211	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BMWSH_0212	COG0457	Tetratricopeptide repeat
BMWSH_0213	COG0492	ferredoxin-NADP+ reductase activity
BMWSH_0214	COG1051	belongs to the nudix hydrolase family
BMWSH_0215	COG1660	Displays ATPase and GTPase activities
BMWSH_0216	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BMWSH_0218	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMWSH_0221	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BMWSH_0229	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BMWSH_0230	COG1647	Serine aminopeptidase, S33
BMWSH_0231	COG0557	exoribonuclease II activity
BMWSH_0232	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
BMWSH_0233	COG4149	molybdate abc transporter
BMWSH_0234	COG0725	ABC transporter, periplasmic molybdate-binding protein
BMWSH_0235	COG2427	Protein of unknown function (DUF1641)
BMWSH_0236	COG3383	formate dehydrogenase (NAD+) activity
BMWSH_0237	COG5609	conserved protein (DUF2294)
BMWSH_0238	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BMWSH_0240	COG0746	molybdenum cofactor guanylyltransferase activity
BMWSH_0241	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BMWSH_0242	COG0303	'Molybdopterin
BMWSH_0243	COG1763	Mo-molybdopterin cofactor biosynthetic process
BMWSH_0244	COG1846	Transcriptional regulator
BMWSH_0245	COG0671	phosphoesterase, PA-phosphatase related
BMWSH_0247	COG3850	Histidine kinase
BMWSH_0247	COG5002	protein histidine kinase activity
BMWSH_0248	COG0672	)-iron permease
BMWSH_0250	COG0583	DNA-binding transcription factor activity
BMWSH_0251	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BMWSH_0252	COG0477	Major facilitator Superfamily
BMWSH_0253	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_0255	COG1309	transcriptional regulator
BMWSH_0256	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BMWSH_0259	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BMWSH_0260	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BMWSH_0261	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BMWSH_0262	COG1120	ATPase activity
BMWSH_0267	COG1024	Enoyl-CoA hydratase
BMWSH_0267	COG1250	3-hydroxyacyl-CoA dehydrogenase
BMWSH_0268	COG0183	Belongs to the thiolase family
BMWSH_0269	COG1960	acyl-CoA dehydrogenase activity
BMWSH_0270	COG1393	Belongs to the ArsC family
BMWSH_0271	COG0509	glycine decarboxylation via glycine cleavage system
BMWSH_0273	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BMWSH_0274	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BMWSH_0275	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BMWSH_0276	COG2011	ABC-type metal ion transport system permease component
BMWSH_0277	COG1464	Belongs to the NlpA lipoprotein family
BMWSH_0278	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BMWSH_0279	COG0396	ATPase activity
BMWSH_0280	COG0719	Fe-S assembly protein
BMWSH_0281	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BMWSH_0282	COG0822	iron-sulfur transferase activity
BMWSH_0283	COG0719	Fe-S assembly protein
BMWSH_0284	COG1801	Protein of unknown function DUF72
BMWSH_0285	COG3377	Domain of unknown function (DUF1805)
BMWSH_0287	COG0733	neurotransmitter:sodium symporter activity
BMWSH_0289	COG0739	heme binding
BMWSH_0290	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
BMWSH_0292	COG4470	Protein conserved in bacteria
BMWSH_0294	COG2445	Protein of unknown function DUF86
BMWSH_0295	COG0647	UMP catabolic process
BMWSH_0296	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BMWSH_0297	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BMWSH_0298	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BMWSH_0299	COG0460	homoserine dehydrogenase
BMWSH_0300	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BMWSH_0301	COG0083	homoserine kinase activity
BMWSH_0302	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
BMWSH_0303	COG4837	Protein of unknown function (DUF1462)
BMWSH_0304	COG1252	NADH dehydrogenase
BMWSH_0305	COG4844	belongs to the
BMWSH_0307	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BMWSH_0308	COG0316	Belongs to the HesB IscA family
BMWSH_0310	COG0492	ferredoxin-NADP+ reductase activity
BMWSH_0311	COG1252	NADH dehydrogenase
BMWSH_0313	COG3584	3D domain protein
BMWSH_0314	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
BMWSH_0315	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BMWSH_0316	COG2056	Na+-H+ antiporter family
BMWSH_0318	COG1418	mRNA catabolic process
BMWSH_0320	COG2050	protein possibly involved in aromatic compounds catabolism
BMWSH_0321	COG5018	Exonuclease
BMWSH_0324	COG2032	superoxide dismutase activity
BMWSH_0325	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BMWSH_0326	COG2267	carboxylic ester hydrolase activity
BMWSH_0327	COG1522	sequence-specific DNA binding
BMWSH_0328	COG0436	Aminotransferase
BMWSH_0329	COG1098	S1 RNA binding domain
BMWSH_0330	COG2155	Conserved Protein
BMWSH_0331	COG1979	alcohol dehydrogenase
BMWSH_0332	COG1320	monovalent cation:proton antiporter activity
BMWSH_0333	COG2212	antiporter activity
BMWSH_0334	COG2111	Na H antiporter
BMWSH_0334	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BMWSH_0336	COG0166	Belongs to the GPI family
BMWSH_0338	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BMWSH_0339	COG0346	lactoylglutathione lyase activity
BMWSH_0342	COG0306	phosphate transporter
BMWSH_0344	COG0529	Catalyzes the synthesis of activated sulfate
BMWSH_0346	COG0318	PFAM AMP-dependent synthetase and ligase
BMWSH_0350	COG0297	glycogen (starch) synthase activity
BMWSH_0351	COG0058	SHG alpha-glucan phosphorylase activity
BMWSH_0353	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BMWSH_0354	COG1169	isochorismate synthase
BMWSH_0355	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
BMWSH_0356	COG0596	Alpha beta hydrolase
BMWSH_0357	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BMWSH_0358	COG0318	PFAM AMP-dependent synthetase and ligase
BMWSH_0359	COG4948	Mandelate Racemase Muconate Lactonizing
BMWSH_0360	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BMWSH_0361	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BMWSH_0366	COG0716	FMN binding
BMWSH_0367	COG1294	oxidase, subunit
BMWSH_0368	COG1271	oxidase subunit
BMWSH_0369	COG0254	rRNA binding
BMWSH_0371	COG0523	cobalamin synthesis protein
BMWSH_0372	COG0288	reversible hydration of carbon dioxide
BMWSH_0373	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
BMWSH_0375	COG0783	Belongs to the Dps family
BMWSH_0376	COG4824	toxin secretion phage lysis holin
BMWSH_0378	COG0494	nUDIX hydrolase
BMWSH_0379	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BMWSH_0380	COG1116	anion transmembrane transporter activity
BMWSH_0381	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BMWSH_0382	COG1506	peptidase
BMWSH_0384	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
BMWSH_0385	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BMWSH_0386	COG0438	transferase activity, transferring glycosyl groups
BMWSH_0387	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BMWSH_0387	COG0438	transferase activity, transferring glycosyl groups
BMWSH_0388	COG0671	phosphoesterase, PA-phosphatase related
BMWSH_0389	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BMWSH_0390	COG2267	carboxylic ester hydrolase activity
BMWSH_0392	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BMWSH_0393	COG1242	4 iron, 4 sulfur cluster binding
BMWSH_0396	COG2814	Major facilitator Superfamily
BMWSH_0397	COG2610	gluconate transmembrane transporter activity
BMWSH_0399	COG0495	leucyl-tRNA aminoacylation
BMWSH_0400	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BMWSH_0402	COG2081	HI0933 family
BMWSH_0403	COG2244	polysaccharide biosynthetic process
BMWSH_0404	COG1187	pseudouridine synthase activity
BMWSH_0405	COG1349	DNA-binding transcription factor activity
BMWSH_0406	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BMWSH_0407	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BMWSH_0408	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
BMWSH_0410	COG1523	belongs to the glycosyl hydrolase 13 family
BMWSH_0411	COG0510	thiamine kinase activity
BMWSH_0413	COG0220	tRNA (guanine-N7-)-methyltransferase activity
BMWSH_0414	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BMWSH_0415	COG5584	Small secreted protein
BMWSH_0416	COG1363	Peptidase, m42
BMWSH_0417	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
BMWSH_0418	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BMWSH_0419	COG4848	Belongs to the UPF0354 family
BMWSH_0420	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BMWSH_0421	COG1674	ftsk spoiiie
BMWSH_0423	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BMWSH_0426	COG4980	gas vesicle protein
BMWSH_0427	COG3118	belongs to the thioredoxin family
BMWSH_0428	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
BMWSH_0428	COG1605	Chorismate mutase
BMWSH_0433	COG0123	including yeast histone deacetylase and acetoin utilization protein
BMWSH_0434	COG0517	IMP dehydrogenase activity
BMWSH_0435	COG0454	-acetyltransferase
BMWSH_0436	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BMWSH_0437	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BMWSH_0440	COG1956	GAF domain-containing protein
BMWSH_0441	COG1309	transcriptional regulator
BMWSH_0442	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BMWSH_0443	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
BMWSH_0444	COG1114	Component of the transport system for branched-chain amino acids
BMWSH_0445	COG1104	cysteine desulfurase activity
BMWSH_0446	COG0301	tRNA thio-modification
BMWSH_0448	COG1574	metal-dependent hydrolase with the TIM-barrel fold
BMWSH_0449	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BMWSH_0450	COG0616	signal peptide processing
BMWSH_0451	COG1714	RDD family
BMWSH_0453	COG3874	Sporulation protein YtfJ
BMWSH_0454	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BMWSH_0455	COG0827	DNA restriction-modification system
BMWSH_0456	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BMWSH_0459	COG0137	argininosuccinate synthase activity
BMWSH_0460	COG0165	Argininosuccinate lyase
BMWSH_0463	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BMWSH_0466	COG4109	DRTGG domain
BMWSH_0468	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
BMWSH_0471	COG0587	DNA-directed DNA polymerase activity
BMWSH_0472	COG0281	malic enzyme
BMWSH_0473	COG2186	Transcriptional regulator
BMWSH_0474	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BMWSH_0475	COG0825	malonyl-CoA metabolic process
BMWSH_0477	COG3030	protein affecting phage T7 exclusion by the F plasmid
BMWSH_0478	COG0628	permease
BMWSH_0479	COG2707	UPF0756 membrane protein
BMWSH_0481	COG0372	Belongs to the citrate synthase family
BMWSH_0482	COG0538	isocitrate dehydrogenase activity
BMWSH_0483	COG0039	L-malate dehydrogenase activity
BMWSH_0485	COG0745	RESPONSE REGULATOR receiver
BMWSH_0486	COG5002	protein histidine kinase activity
BMWSH_0487	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BMWSH_0487	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BMWSH_0489	COG1971	Probably functions as a manganese efflux pump
BMWSH_0491	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BMWSH_0492	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
BMWSH_0494	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BMWSH_0495	COG3611	Membrane attachment protein
BMWSH_0496	COG1484	DNA-dependent DNA replication
BMWSH_0498	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BMWSH_0499	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BMWSH_0500	COG0291	Belongs to the bacterial ribosomal protein bL35 family
BMWSH_0501	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BMWSH_0505	COG1363	Peptidase, m42
BMWSH_0507	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BMWSH_0509	COG0072	phenylalanine-tRNA ligase activity
BMWSH_0509	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BMWSH_0511	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
BMWSH_0512	COG1286	toxin biosynthetic process
BMWSH_0513	COG1796	DNA polymerase
BMWSH_0513	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BMWSH_0514	COG1193	negative regulation of DNA recombination
BMWSH_0515	COG3766	membrane
BMWSH_0516	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BMWSH_0517	COG0318	PFAM AMP-dependent synthetase and ligase
BMWSH_0518	COG1309	transcriptional regulator
BMWSH_0519	COG1024	Enoyl-CoA hydratase
BMWSH_0520	COG2086	electron transfer activity
BMWSH_0521	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BMWSH_0522	COG3118	belongs to the thioredoxin family
BMWSH_0524	COG0527	aspartate kinase activity
BMWSH_0525	COG1719	4-vinyl reductase, 4VR
BMWSH_0526	COG2009	succinate dehydrogenase
BMWSH_0527	COG1053	succinate dehydrogenase
BMWSH_0528	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BMWSH_0529	COG0824	Thioesterase
BMWSH_0531	COG2197	response regulator
BMWSH_0533	COG0490	domain, Protein
BMWSH_0534	COG0475	glutathione-regulated potassium exporter activity
BMWSH_0535	COG1116	anion transmembrane transporter activity
BMWSH_0536	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BMWSH_0537	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BMWSH_0538	COG0431	NADPH-dependent FMN reductase
BMWSH_0539	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BMWSH_0541	COG0768	penicillin binding
BMWSH_0542	COG1392	Phosphate transport regulator
BMWSH_0543	COG0306	phosphate transporter
BMWSH_0545	COG1846	Transcriptional regulator
BMWSH_0546	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
BMWSH_0547	COG5401	PFAM Sporulation and spore germination
BMWSH_0550	COG0622	Phosphoesterase
BMWSH_0551	COG0028	Belongs to the TPP enzyme family
BMWSH_0552	COG0440	acetolactate synthase activity
BMWSH_0553	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BMWSH_0554	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BMWSH_0556	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BMWSH_0557	COG0066	3-isopropylmalate dehydratase activity
BMWSH_0558	COG1477	protein flavinylation
BMWSH_0558	COG0457	Tetratricopeptide repeat
BMWSH_0559	COG0544	peptidyl-prolyl cis-trans isomerase activity
BMWSH_0560	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BMWSH_0561	COG1067	ATP-dependent peptidase activity
BMWSH_0561	COG0470	DNA polymerase III
BMWSH_0562	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BMWSH_0563	COG0218	Necessary for normal cell division and for the maintenance of normal septation
BMWSH_0566	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BMWSH_0567	COG0181	hydroxymethylbilane synthase activity
BMWSH_0568	COG1587	Uroporphyrinogen-III synthase
BMWSH_0569	COG0113	porphobilinogen synthase activity
BMWSH_0570	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BMWSH_0571	COG1388	LysM domain
BMWSH_0572	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BMWSH_0574	COG0525	valine-tRNA ligase activity
BMWSH_0575	COG0285	dihydrofolate synthase activity
BMWSH_0576	COG2322	membrane
BMWSH_0578	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BMWSH_0580	COG0424	maF-like protein
BMWSH_0581	COG2003	Belongs to the UPF0758 family
BMWSH_0582	COG1077	Cell shape determining protein MreB Mrl
BMWSH_0583	COG1792	Involved in formation and maintenance of cell shape
BMWSH_0584	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
BMWSH_0585	COG0850	regulation of cytokinetic process
BMWSH_0586	COG2894	cell division
BMWSH_0587	COG0739	heme binding
BMWSH_0588	COG1994	Peptidase M50
BMWSH_0589	COG1530	ribonuclease E activity
BMWSH_0591	COG2868	ribosomal protein
BMWSH_0593	COG3290	protein histidine kinase activity
BMWSH_0594	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BMWSH_0595	COG4492	Belongs to the UPF0735 family
BMWSH_0596	COG0077	Prephenate dehydratase
BMWSH_0597	COG1827	regulation of RNA biosynthetic process
BMWSH_0598	COG1104	cysteine desulfurase activity
BMWSH_0599	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BMWSH_0600	COG1388	LysM domain
BMWSH_0607	COG1862	Preprotein translocase
BMWSH_0609	COG2323	membrane
BMWSH_0610	COG2244	polysaccharide biosynthetic process
BMWSH_0612	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BMWSH_0612	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BMWSH_0613	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
BMWSH_0613	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BMWSH_0614	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BMWSH_0615	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BMWSH_0616	COG1490	D-aminoacyl-tRNA deacylase activity
BMWSH_0617	COG0860	N-Acetylmuramoyl-L-alanine amidase
BMWSH_0619	COG0124	histidyl-tRNA synthetase
BMWSH_0620	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
BMWSH_0621	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BMWSH_0622	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BMWSH_0623	COG0573	inorganic phosphate transmembrane transporter activity
BMWSH_0624	COG0581	inorganic phosphate transmembrane transporter activity
BMWSH_0625	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BMWSH_0626	COG1959	2 iron, 2 sulfur cluster binding
BMWSH_0627	COG1104	cysteine desulfurase activity
BMWSH_0628	COG0482	sulfurtransferase activity
BMWSH_0630	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BMWSH_0633	COG0628	permease
BMWSH_0636	COG4472	Bacterial protein of unknown function (DUF965)
BMWSH_0638	COG3906	Belongs to the UPF0473 family
BMWSH_0639	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BMWSH_0643	COG0572	uridine kinase
BMWSH_0644	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BMWSH_0645	COG1335	isochorismatase
BMWSH_0646	COG0768	penicillin binding
BMWSH_0649	COG2226	methyltransferase
BMWSH_0652	COG1191	sigma factor activity
BMWSH_0654	COG1183	phosphatidylcholine synthase activity
BMWSH_0655	COG0688	phosphatidylethanolamine metabolic process
BMWSH_0657	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
BMWSH_0658	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BMWSH_0659	COG1713	HD superfamily hydrolase involved in NAD metabolism
BMWSH_0660	COG0799	negative regulation of ribosome biogenesis
BMWSH_0661	COG2226	methyltransferase
BMWSH_0662	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BMWSH_0663	COG1555	photosystem II stabilization
BMWSH_0663	COG1596	polysaccharide export
BMWSH_0664	COG2131	deaminase
BMWSH_0665	COG0658	competence protein
BMWSH_0665	COG2333	competence protein COMEC
BMWSH_0667	COG1466	dna polymerase III delta subunit
BMWSH_0668	COG0268	Binds directly to 16S ribosomal RNA
BMWSH_0669	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
BMWSH_0671	COG0481	GTPase activity
BMWSH_0672	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BMWSH_0673	COG1420	regulation of RNA biosynthetic process
BMWSH_0674	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BMWSH_0677	COG2264	protein methyltransferase activity
BMWSH_0678	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BMWSH_0679	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BMWSH_0680	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BMWSH_0681	COG1610	YqeY-like protein
BMWSH_0682	COG1030	water channel activity
BMWSH_0687	COG1702	phosphate starvation-inducible protein PhoH
BMWSH_0688	COG1480	7TM receptor with intracellular HD hydrolase
BMWSH_0690	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BMWSH_0691	COG0295	cytidine deaminase activity
BMWSH_0692	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BMWSH_0695	COG0517	IMP dehydrogenase activity
BMWSH_0696	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
BMWSH_0697	COG1671	Belongs to the UPF0178 family
BMWSH_0698	COG0358	DNA primase activity
BMWSH_0699	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BMWSH_0700	COG1960	acyl-CoA dehydrogenase activity
BMWSH_0701	COG2010	Cytochrome c
BMWSH_0702	COG2384	SAM-dependent methyltransferase
BMWSH_0703	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BMWSH_0704	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
BMWSH_0706	COG0513	Belongs to the DEAD box helicase family
BMWSH_0707	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
BMWSH_0709	COG1121	(ABC) transporter
BMWSH_0710	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BMWSH_0711	COG0735	belongs to the Fur family
BMWSH_0712	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
BMWSH_0713	COG4709	membrane
BMWSH_0714	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
BMWSH_0715	COG1388	LysM domain
BMWSH_0716	COG2814	Major facilitator Superfamily
BMWSH_0717	COG2814	Major facilitator Superfamily
BMWSH_0719	COG2839	Protein conserved in bacteria
BMWSH_0721	COG0477	Major facilitator Superfamily
BMWSH_0724	COG0704	Plays a role in the regulation of phosphate uptake
BMWSH_0727	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BMWSH_0729	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BMWSH_0732	COG0457	Tetratricopeptide repeat
BMWSH_0732	COG0705	Rhomboid family
BMWSH_0733	COG4483	Protein conserved in bacteria
BMWSH_0734	COG1940	carbohydrate kinase activity
BMWSH_0736	COG2866	Carboxypeptidase
BMWSH_0738	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BMWSH_0740	COG1393	Belongs to the ArsC family
BMWSH_0742	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BMWSH_0743	COG1459	type II secretion system
BMWSH_0744	COG4537	Required for transformation and DNA binding
BMWSH_0745	COG4970	Tfp pilus assembly protein FimT
BMWSH_0751	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BMWSH_0752	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BMWSH_0753	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BMWSH_0754	COG0095	Lipoate-protein ligase
BMWSH_0757	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BMWSH_0758	COG1321	iron dependent repressor
BMWSH_0759	COG1752	Esterase of the alpha-beta hydrolase superfamily
BMWSH_0761	COG3872	metal-dependent enzyme
BMWSH_0763	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BMWSH_0764	COG3854	ATPases associated with a variety of cellular activities
BMWSH_0773	COG0511	ligase activity, forming carbon-carbon bonds
BMWSH_0774	COG0439	Biotin carboxylase
BMWSH_0775	COG1302	Protein conserved in bacteria
BMWSH_0776	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BMWSH_0778	COG1722	exodeoxyribonuclease VII activity
BMWSH_0781	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
BMWSH_0783	COG0497	DNA recombination
BMWSH_0784	COG0750	zinc metalloprotease
BMWSH_0785	COG0745	RESPONSE REGULATOR receiver
BMWSH_0787	COG3104	oligopeptide transport
BMWSH_0788	COG3093	addiction module antidote protein HigA
BMWSH_0789	COG0584	glycerophosphoryl diester phosphodiesterase
BMWSH_0791	COG3829	transcription factor binding
BMWSH_0791	COG3290	protein histidine kinase activity
BMWSH_0792	COG0280	phosphate acetyltransferase
BMWSH_0795	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BMWSH_0796	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BMWSH_0797	COG0022	dehydrogenase e1 component
BMWSH_0798	COG0508	dehydrogenase complex catalyzes the overall conversion of
BMWSH_0799	COG0508	dehydrogenase complex catalyzes the overall conversion of
BMWSH_0801	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BMWSH_0801	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BMWSH_0802	COG1703	isobutyryl-CoA mutase activity
BMWSH_0804	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BMWSH_0805	COG4129	membrane
BMWSH_0806	COG1376	ErfK ybiS ycfS ynhG family protein
BMWSH_0808	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BMWSH_0809	COG2195	Cleaves the N-terminal amino acid of tripeptides
BMWSH_0810	COG0493	'glutamate synthase
BMWSH_0813	COG2508	Transcriptional regulator
BMWSH_0814	COG1012	belongs to the aldehyde dehydrogenase family
BMWSH_0815	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BMWSH_0816	COG1234	tRNA 3'-trailer cleavage
BMWSH_0817	COG1902	pentaerythritol trinitrate reductase activity
BMWSH_0818	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BMWSH_0819	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BMWSH_0820	COG0300	oxidoreductase activity
BMWSH_0823	COG1073	alpha beta
BMWSH_0824	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BMWSH_0826	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BMWSH_0827	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BMWSH_0829	COG0667	Aldo Keto reductase
BMWSH_0831	COG0494	nUDIX hydrolase
BMWSH_0832	COG1300	Membrane
BMWSH_0833	COG0735	belongs to the Fur family
BMWSH_0835	COG4974	Belongs to the 'phage' integrase family
BMWSH_0838	COG1686	Belongs to the peptidase S11 family
BMWSH_0845	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BMWSH_0848	COG0697	spore germination
BMWSH_0850	COG4086	secreted protein
BMWSH_0851	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BMWSH_0853	COG1547	Domain of unknown function (DUF309)
BMWSH_0855	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BMWSH_0856	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BMWSH_0857	COG1686	Belongs to the peptidase S11 family
BMWSH_0858	COG2715	membrane protein required for spore maturation
BMWSH_0859	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BMWSH_0860	COG1333	cytochrome c biogenesis protein
BMWSH_0861	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BMWSH_0863	COG0745	RESPONSE REGULATOR receiver
BMWSH_0864	COG5002	protein histidine kinase activity
BMWSH_0865	COG0739	heme binding
BMWSH_0866	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BMWSH_0868	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BMWSH_0869	COG1141	Ferredoxin
BMWSH_0871	COG0514	ATP-dependent DNA helicase (RecQ)
BMWSH_0872	COG1266	CAAX protease self-immunity
BMWSH_0875	COG1408	metallophosphoesterase
BMWSH_0876	COG0789	Transcriptional regulator
BMWSH_0877	COG4862	establishment of competence for transformation
BMWSH_0878	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BMWSH_0879	COG0492	ferredoxin-NADP+ reductase activity
BMWSH_0880	COG0252	asparaginase activity
BMWSH_0881	COG2339	peptidase activity
BMWSH_0882	COG3773	Cell wall hydrolase
BMWSH_0882	COG3409	Peptidoglycan-binding domain 1 protein
BMWSH_0883	COG2959	enzyme of heme biosynthesis
BMWSH_0886	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
BMWSH_0888	COG0539	negative regulation of cytoplasmic translation
BMWSH_0889	COG1304	FMN binding
BMWSH_0890	COG2271	Major facilitator Superfamily
BMWSH_0898	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BMWSH_0899	COG0776	regulation of translation
BMWSH_0900	COG0302	gtp cyclohydrolase
BMWSH_0902	COG0142	geranyltranstransferase activity
BMWSH_0903	COG2226	methyltransferase
BMWSH_0904	COG0142	geranyltranstransferase activity
BMWSH_0905	COG0105	UTP biosynthetic process
BMWSH_0906	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BMWSH_0907	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BMWSH_0908	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BMWSH_0910	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BMWSH_0911	COG0134	indole-3-glycerol-phosphate synthase activity
BMWSH_0912	COG0135	phosphoribosylanthranilate isomerase activity
BMWSH_0913	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BMWSH_0914	COG0287	Prephenate dehydrogenase
BMWSH_0915	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
BMWSH_0916	COG0457	Tetratricopeptide repeat
BMWSH_0917	COG5582	Belongs to the UPF0302 family
BMWSH_0920	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BMWSH_0924	COG3679	Belongs to the UPF0342 family
BMWSH_0926	COG4471	UPF0298 protein
BMWSH_0928	COG0742	ribosomal rna small subunit methyltransferase
BMWSH_0929	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BMWSH_0930	COG3314	Sporulation integral membrane protein YlbJ
BMWSH_0931	COG1752	Esterase of the alpha-beta hydrolase superfamily
BMWSH_0932	COG3480	Lon protease (S16) C-terminal proteolytic domain
BMWSH_0933	COG1323	Belongs to the UPF0348 family
BMWSH_0934	COG1399	metal-binding, possibly nucleic acid-binding protein
BMWSH_0935	COG0333	Belongs to the bacterial ribosomal protein bL32 family
BMWSH_0936	COG1024	Enoyl-CoA hydratase
BMWSH_0938	COG0454	-acetyltransferase
BMWSH_0939	COG0439	Biotin carboxylase
BMWSH_0940	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BMWSH_0942	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
BMWSH_0944	COG4839	cell division protein FtsL
BMWSH_0946	COG0768	penicillin binding
BMWSH_0947	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BMWSH_0948	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BMWSH_0949	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BMWSH_0950	COG0772	Belongs to the SEDS family
BMWSH_0952	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BMWSH_0953	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BMWSH_0954	COG0849	cell division
BMWSH_0955	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BMWSH_0957	COG1191	sigma factor activity
BMWSH_0958	COG1191	sigma factor activity
BMWSH_0959	COG1873	PFAM PRC-barrel domain
BMWSH_0961	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BMWSH_0962	COG1799	cell septum assembly
BMWSH_0963	COG0762	integral membrane protein
BMWSH_0964	COG2302	S4 RNA-binding domain
BMWSH_0965	COG3599	regulation of cell shape
BMWSH_0968	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BMWSH_0969	COG0564	pseudouridine synthase activity
BMWSH_0971	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BMWSH_0974	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BMWSH_0977	COG0543	2 iron, 2 sulfur cluster binding
BMWSH_0980	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BMWSH_0982	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BMWSH_0983	COG1561	YicC-like family, N-terminal region
BMWSH_0984	COG2052	Domain of unknown function (DUF370)
BMWSH_0985	COG0194	GDP metabolic process
BMWSH_0986	COG1758	RNA polymerase activity
BMWSH_0987	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BMWSH_0988	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BMWSH_0991	COG0631	protein serine/threonine phosphatase activity
BMWSH_0992	COG0515	serine threonine protein kinase
BMWSH_0992	COG2815	serine threonine protein kinase
BMWSH_0993	COG1162	GTPase activity
BMWSH_0994	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BMWSH_0996	COG1564	THIamine pyrophosphokinase
BMWSH_0997	COG0227	Belongs to the bacterial ribosomal protein bL28 family
BMWSH_0998	COG1302	Protein conserved in bacteria
BMWSH_0999	COG1461	Dihydroxyacetone kinase
BMWSH_1001	COG1760	l-serine dehydratase
BMWSH_1002	COG1760	l-serine dehydratase
BMWSH_1003	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BMWSH_1004	COG1349	DNA-binding transcription factor activity
BMWSH_1005	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_1006	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BMWSH_1008	COG1196	nuclear chromosome segregation
BMWSH_1009	COG0552	protein localization to endoplasmic reticulum
BMWSH_1011	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BMWSH_1012	COG0228	four-way junction DNA binding
BMWSH_1013	COG1837	Belongs to the UPF0109 family
BMWSH_1015	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BMWSH_1017	COG0335	large ribosomal subunit rRNA binding
BMWSH_1021	COG0045	succinate-CoA ligase (ADP-forming) activity
BMWSH_1022	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BMWSH_1023	COG0758	DNA mediated transformation
BMWSH_1024	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BMWSH_1026	COG4974	Belongs to the 'phage' integrase family
BMWSH_1028	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BMWSH_1029	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
BMWSH_1031	COG1815	bacterial-type flagellum-dependent cell motility
BMWSH_1032	COG1558	bacterial-type flagellum-dependent cell motility
BMWSH_1033	COG1677	Flagellar hook-basal body complex protein FliE
BMWSH_1034	COG1766	The M ring may be actively involved in energy transduction
BMWSH_1035	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BMWSH_1036	COG1317	bacterial-type flagellum organization
BMWSH_1037	COG1157	protein secretion by the type III secretion system
BMWSH_1038	COG2882	bacterial-type flagellum organization
BMWSH_1041	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BMWSH_1042	COG4786	Flagellar basal body rod
BMWSH_1043	COG1582	Flagellar protein (FlbD)
BMWSH_1045	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BMWSH_1046	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BMWSH_1046	COG1776	CheC inhibitor of MCP methylation
BMWSH_1047	COG2201	protein-glutamate methylesterase activity
BMWSH_1048	COG3190	flagellar
BMWSH_1049	COG1338	Plays a role in the flagellum-specific transport system
BMWSH_1050	COG1987	bacterial-type flagellum assembly
BMWSH_1051	COG1684	flagellar biosynthetic protein fliR
BMWSH_1052	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BMWSH_1053	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BMWSH_1054	COG1419	protein localization to endoplasmic reticulum
BMWSH_1055	COG0455	bacterial-type flagellum organization
BMWSH_1056	COG2201	protein-glutamate methylesterase activity
BMWSH_1057	COG0643	Histidine kinase
BMWSH_1057	COG2198	Histidine kinase
BMWSH_1058	COG0835	chemotaxis
BMWSH_1059	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
BMWSH_1060	COG1191	sigma factor activity
BMWSH_1063	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BMWSH_1064	COG0528	UMP kinase activity
BMWSH_1065	COG0233	cytoplasmic translational termination
BMWSH_1067	COG4589	Belongs to the CDS family
BMWSH_1069	COG0750	zinc metalloprotease
BMWSH_1070	COG0442	prolyl-tRNA aminoacylation
BMWSH_1071	COG2176	DNA-directed DNA polymerase activity
BMWSH_1072	COG0779	Required for maturation of 30S ribosomal subunits
BMWSH_1073	COG0195	Participates in both transcription termination and antitermination
BMWSH_1074	COG2740	Nucleic-acid-binding protein implicated in transcription termination
BMWSH_1075	COG1358	cellular component organization or biogenesis
BMWSH_1077	COG1550	Protein conserved in bacteria
BMWSH_1080	COG0196	riboflavin kinase activity
BMWSH_1081	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BMWSH_1082	COG1185	polyribonucleotide nucleotidyltransferase activity
BMWSH_1083	COG0726	polysaccharide deacetylase
BMWSH_1084	COG0612	Peptidase, M16
BMWSH_1085	COG1873	PFAM PRC-barrel domain
BMWSH_1086	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BMWSH_1087	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BMWSH_1088	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BMWSH_1089	COG0527	aspartate kinase activity
BMWSH_1091	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BMWSH_1092	COG0740	serine-type endopeptidase activity
BMWSH_1094	COG1674	ftsk spoiiie
BMWSH_1094	COG4980	gas vesicle protein
BMWSH_1095	COG2188	Transcriptional regulator
BMWSH_1099	COG0612	Peptidase, M16
BMWSH_1100	COG0300	oxidoreductase activity
BMWSH_1103	COG1426	Protein conserved in bacteria
BMWSH_1105	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BMWSH_1106	COG1058	Belongs to the CinA family
BMWSH_1106	COG1546	Belongs to the CinA family
BMWSH_1107	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BMWSH_1109	COG1692	metallophosphoesterase
BMWSH_1110	COG2359	stage V sporulation protein S
BMWSH_1114	COG0674	pyruvate-flavodoxin oxidoreductase activity
BMWSH_1114	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
BMWSH_1115	COG1013	pyruvate-flavodoxin oxidoreductase activity
BMWSH_1116	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BMWSH_1117	COG4550	Control of competence regulator ComK, YlbF/YmcA
BMWSH_1119	COG0531	amino acid
BMWSH_1120	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BMWSH_1122	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BMWSH_1124	COG0464	growth
BMWSH_1125	COG2860	membrane
BMWSH_1126	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BMWSH_1127	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
BMWSH_1128	COG0789	Transcriptional regulator
BMWSH_1129	COG0174	glutamine synthetase
BMWSH_1132	COG0531	amino acid
BMWSH_1133	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BMWSH_1134	COG0463	Glycosyl transferase, family 2
BMWSH_1142	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BMWSH_1143	COG4224	UPF0291 protein
BMWSH_1147	COG1132	(ABC) transporter
BMWSH_1148	COG1132	(ABC) transporter
BMWSH_1150	COG0785	Cytochrome C biogenesis protein
BMWSH_1151	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
BMWSH_1152	COG4846	Membrane protein involved in cytochrome C biogenesis
BMWSH_1154	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BMWSH_1157	COG1012	belongs to the aldehyde dehydrogenase family
BMWSH_1160	COG3852	Histidine kinase
BMWSH_1161	COG0415	Belongs to the DNA photolyase family
BMWSH_1165	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BMWSH_1166	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BMWSH_1168	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BMWSH_1170	COG1307	EDD domain protein, DegV family
BMWSH_1172	COG1999	signal sequence binding
BMWSH_1173	COG2755	lipolytic protein G-D-S-L family
BMWSH_1178	COG4191	Histidine kinase
BMWSH_1180	COG1301	dicarboxylic acid transport
BMWSH_1181	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BMWSH_1182	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BMWSH_1183	COG0456	acetyltransferase
BMWSH_1184	COG1509	lysine 2,3-aminomutase activity
BMWSH_1187	COG3594	Acyltransferase
BMWSH_1188	COG4479	Belongs to the UPF0346 family
BMWSH_1194	COG0515	serine threonine protein kinase
BMWSH_1195	COG4326	sporulation control protein
BMWSH_1197	COG0671	phosphoesterase, PA-phosphatase related
BMWSH_1200	COG0813	purine-nucleoside phosphorylase activity
BMWSH_1201	COG0659	secondary active sulfate transmembrane transporter activity
BMWSH_1202	COG0772	Belongs to the SEDS family
BMWSH_1205	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BMWSH_1207	COG2190	(PTS) system
BMWSH_1208	COG3711	transcriptional antiterminator
BMWSH_1209	COG1263	PTS System
BMWSH_1209	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMWSH_1214	COG1121	(ABC) transporter
BMWSH_1216	COG0584	glycerophosphoryl diester phosphodiesterase
BMWSH_1219	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BMWSH_1222	COG1131	(ABC) transporter
BMWSH_1227	COG0814	amino acid
BMWSH_1228	COG0697	spore germination
BMWSH_1229	COG0432	Pfam Uncharacterised protein family UPF0047
BMWSH_1234	COG0791	NLP P60 protein
BMWSH_1234	COG1388	LysM domain
BMWSH_1235	COG0205	6-phosphofructokinase activity
BMWSH_1237	COG0589	response to stress
BMWSH_1238	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BMWSH_1240	COG1253	flavin adenine dinucleotide binding
BMWSH_1241	COG2340	Cysteine-rich secretory protein family
BMWSH_1242	COG0668	transmembrane transport
BMWSH_1243	COG0385	Bile acid
BMWSH_1245	COG1115	amino acid carrier protein
BMWSH_1246	COG1280	lysine exporter protein (LysE YggA)
BMWSH_1250	COG2514	catechol 2,3-dioxygenase activity
BMWSH_1255	COG0463	Glycosyl transferase, family 2
BMWSH_1260	COG1113	amino acid transport
BMWSH_1264	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BMWSH_1266	COG4195	phage-related replication protein
BMWSH_1268	COG1285	pathogenesis
BMWSH_1269	COG2910	NAD(P)H-binding
BMWSH_1271	COG0730	response to heat
BMWSH_1272	COG0583	DNA-binding transcription factor activity
BMWSH_1274	COG1309	transcriptional regulator
BMWSH_1275	COG5505	Protein of unknown function (DUF819)
BMWSH_1276	COG1113	amino acid transport
BMWSH_1279	COG1902	pentaerythritol trinitrate reductase activity
BMWSH_1280	COG0697	spore germination
BMWSH_1282	COG1368	sulfuric ester hydrolase activity
BMWSH_1283	COG1316	TRANSCRIPTIONal
BMWSH_1289	COG1301	dicarboxylic acid transport
BMWSH_1290	COG0730	response to heat
BMWSH_1291	COG2205	protein histidine kinase activity
BMWSH_1295	COG0395	ABC-type sugar transport system, permease component
BMWSH_1297	COG2814	Major facilitator Superfamily
BMWSH_1299	COG0517	IMP dehydrogenase activity
BMWSH_1299	COG1125	glycine betaine transport
BMWSH_1300	COG1174	glycine betaine transport
BMWSH_1302	COG5522	Integral membrane protein (intg_mem_TP0381)
BMWSH_1303	COG2249	NAD(P)H dehydrogenase (quinone) activity
BMWSH_1306	COG1316	TRANSCRIPTIONal
BMWSH_1308	COG0006	proline dipeptidase activity
BMWSH_1310	COG0697	spore germination
BMWSH_1311	COG1802	Transcriptional regulator
BMWSH_1312	COG1607	acyl-coa hydrolase
BMWSH_1313	COG2515	1-aminocyclopropane-1-carboxylate deaminase
BMWSH_1314	COG2205	protein histidine kinase activity
BMWSH_1314	COG2770	Histidine kinase
BMWSH_1315	COG0745	RESPONSE REGULATOR receiver
BMWSH_1316	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BMWSH_1318	COG1522	sequence-specific DNA binding
BMWSH_1320	COG0569	domain protein
BMWSH_1321	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BMWSH_1323	COG0405	Gamma-glutamyltransferase
BMWSH_1325	COG0833	amino acid
BMWSH_1329	COG0697	spore germination
BMWSH_1331	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BMWSH_1332	COG0726	polysaccharide deacetylase
BMWSH_1333	COG1595	DNA-templated transcription, initiation
BMWSH_1335	COG1846	Transcriptional regulator
BMWSH_1336	COG0840	transmembrane signaling receptor activity
BMWSH_1337	COG1388	LysM domain
BMWSH_1337	COG0791	NLP P60 protein
BMWSH_1341	COG2124	cytochrome p450
BMWSH_1342	COG1733	regulation of RNA biosynthetic process
BMWSH_1343	COG1024	Enoyl-CoA hydratase
BMWSH_1345	COG3973	AAA domain
BMWSH_1348	COG3209	COG3209 Rhs family protein
BMWSH_1349	COG1937	Protein conserved in bacteria
BMWSH_1350	COG1289	transmembrane transporter activity
BMWSH_1353	COG0642	Histidine kinase
BMWSH_1355	COG1136	(ABC) transporter
BMWSH_1356	COG0577	efflux transmembrane transporter activity
BMWSH_1357	COG1752	Esterase of the alpha-beta hydrolase superfamily
BMWSH_1362	COG4980	gas vesicle protein
BMWSH_1363	COG1621	beta-fructofuranosidase activity
BMWSH_1367	COG0789	Transcriptional regulator
BMWSH_1369	COG0667	Aldo Keto reductase
BMWSH_1370	COG0789	Transcriptional regulator
BMWSH_1375	COG1247	-acetyltransferase
BMWSH_1383	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BMWSH_1392	COG0726	polysaccharide deacetylase
BMWSH_1393	COG5001	Diguanylate cyclase
BMWSH_1393	COG3300	MHYT domain
BMWSH_1395	COG0860	N-Acetylmuramoyl-L-alanine amidase
BMWSH_1399	COG3878	Protein conserved in bacteria
BMWSH_1400	COG0506	proline dehydrogenase activity
BMWSH_1401	COG1012	belongs to the aldehyde dehydrogenase family
BMWSH_1402	COG1113	amino acid transport
BMWSH_1403	COG1113	amino acid transport
BMWSH_1408	COG1278	Cold shock
BMWSH_1412	COG1846	Transcriptional regulator
BMWSH_1413	COG2814	Major facilitator Superfamily
BMWSH_1414	COG0791	NLP P60 protein
BMWSH_1418	COG0670	Belongs to the BI1 family
BMWSH_1423	COG2851	Citrate transporter
BMWSH_1424	COG0583	DNA-binding transcription factor activity
BMWSH_1425	COG2828	Protein conserved in bacteria
BMWSH_1429	COG2244	polysaccharide biosynthetic process
BMWSH_1434	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BMWSH_1435	COG0521	Mo-molybdopterin cofactor biosynthetic process
BMWSH_1437	COG0303	'Molybdopterin
BMWSH_1446	COG2207	Transcriptional regulator
BMWSH_1446	COG3708	Transcriptional regulator
BMWSH_1449	COG3339	Conserved Protein
BMWSH_1450	COG1971	Probably functions as a manganese efflux pump
BMWSH_1461	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
BMWSH_1469	COG3620	sequence-specific DNA binding
BMWSH_1472	COG0110	maltose O-acetyltransferase activity
BMWSH_1474	COG1309	transcriptional regulator
BMWSH_1477	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_1478	COG2814	Major facilitator Superfamily
BMWSH_1480	COG0583	DNA-binding transcription factor activity
BMWSH_1482	COG1695	Transcriptional regulator
BMWSH_1486	COG0686	Belongs to the AlaDH PNT family
BMWSH_1489	COG0252	asparaginase activity
BMWSH_1490	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BMWSH_1491	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BMWSH_1492	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMWSH_1492	COG1263	PTS System
BMWSH_1494	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BMWSH_1495	COG0156	8-amino-7-oxononanoate synthase activity
BMWSH_1496	COG1266	CAAX protease self-immunity
BMWSH_1509	COG1595	DNA-templated transcription, initiation
BMWSH_1512	COG4572	Cation transport regulator
BMWSH_1515	COG0477	Major facilitator Superfamily
BMWSH_1518	COG0477	Major facilitator Superfamily
BMWSH_1524	COG2259	Doxx family
BMWSH_1525	COG0346	lactoylglutathione lyase activity
BMWSH_1527	COG1335	isochorismatase
BMWSH_1529	COG2267	carboxylic ester hydrolase activity
BMWSH_1537	COG0583	DNA-binding transcription factor activity
BMWSH_1538	COG1942	4-Oxalocrotonate Tautomerase
BMWSH_1543	COG2311	Membrane
BMWSH_1545	COG1131	(ABC) transporter
BMWSH_1548	COG0745	RESPONSE REGULATOR receiver
BMWSH_1549	COG0745	RESPONSE REGULATOR receiver
BMWSH_1550	COG2205	protein histidine kinase activity
BMWSH_1554	COG2211	Major facilitator Superfamily
BMWSH_1555	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BMWSH_1557	COG1501	Belongs to the glycosyl hydrolase 31 family
BMWSH_1560	COG1012	belongs to the aldehyde dehydrogenase family
BMWSH_1562	COG0523	cobalamin synthesis protein
BMWSH_1563	COG0717	Belongs to the dCTP deaminase family
BMWSH_1564	COG0523	cobalamin synthesis protein
BMWSH_1566	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMWSH_1566	COG1263	PTS System
BMWSH_1566	COG2190	(PTS) system
BMWSH_1567	COG2249	NAD(P)H dehydrogenase (quinone) activity
BMWSH_1568	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_1571	COG0789	Transcriptional regulator
BMWSH_1571	COG4978	Transcriptional regulator
BMWSH_1572	COG0789	Transcriptional regulator
BMWSH_1572	COG4978	Transcriptional regulator
BMWSH_1574	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMWSH_1575	COG0693	protein deglycase activity
BMWSH_1576	COG1335	isochorismatase
BMWSH_1583	COG2076	Multidrug Resistance protein
BMWSH_1584	COG2076	Multidrug Resistance protein
BMWSH_1585	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BMWSH_1588	COG0154	amidase activity
BMWSH_1589	COG1027	Aspartate ammonia-lyase
BMWSH_1590	COG0531	amino acid
BMWSH_1591	COG1794	racemase activity, acting on amino acids and derivatives
BMWSH_1592	COG1388	LysM domain
BMWSH_1593	COG1733	regulation of RNA biosynthetic process
BMWSH_1595	COG0604	alcohol dehydrogenase
BMWSH_1599	COG1278	Cold shock
BMWSH_1601	COG2814	Major facilitator Superfamily
BMWSH_1603	COG1309	transcriptional regulator
BMWSH_1606	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
BMWSH_1607	COG5646	InterPro IPR014922
BMWSH_1615	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BMWSH_1616	COG2258	MOSC domain
BMWSH_1617	COG1388	LysM domain
BMWSH_1617	COG0791	NLP P60 protein
BMWSH_1618	COG0697	spore germination
BMWSH_1625	COG1846	Transcriptional regulator
BMWSH_1631	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BMWSH_1631	COG1918	ferrous iron import across plasma membrane
BMWSH_1632	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BMWSH_1634	COG1078	dGTPase activity
BMWSH_1635	COG1609	Transcriptional regulator
BMWSH_1638	COG2160	L-arabinose isomerase activity
BMWSH_1639	COG2814	Major facilitator Superfamily
BMWSH_1644	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BMWSH_1652	COG1280	lysine exporter protein (LysE YggA)
BMWSH_1658	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BMWSH_1660	COG0561	phosphatase activity
BMWSH_1661	COG1349	DNA-binding transcription factor activity
BMWSH_1663	COG3619	membrane
BMWSH_1667	COG2186	Transcriptional regulator
BMWSH_1670	COG0583	DNA-binding transcription factor activity
BMWSH_1672	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BMWSH_1673	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BMWSH_1674	COG1116	anion transmembrane transporter activity
BMWSH_1676	COG1024	Enoyl-CoA hydratase
BMWSH_1677	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BMWSH_1678	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BMWSH_1680	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BMWSH_1682	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BMWSH_1684	COG0454	-acetyltransferase
BMWSH_1685	COG4335	DNA alkylation repair
BMWSH_1690	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_1692	COG1366	Belongs to the anti-sigma-factor antagonist family
BMWSH_1693	COG0598	Magnesium transport protein CorA
BMWSH_1700	COG1876	peptidase activity
BMWSH_1701	COG5001	Diguanylate cyclase
BMWSH_1702	COG0840	transmembrane signaling receptor activity
BMWSH_1702	COG3290	protein histidine kinase activity
BMWSH_1704	COG1278	Cold shock
BMWSH_1705	COG1366	Belongs to the anti-sigma-factor antagonist family
BMWSH_1709	COG0662	Cupin 2, conserved barrel domain protein
BMWSH_1713	COG0789	Transcriptional regulator
BMWSH_1714	COG1064	alcohol dehydrogenase
BMWSH_1717	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_1718	COG0583	DNA-binding transcription factor activity
BMWSH_1723	COG1131	(ABC) transporter
BMWSH_1726	COG0745	RESPONSE REGULATOR receiver
BMWSH_1729	COG1404	Belongs to the peptidase S8 family
BMWSH_1731	COG2329	Antibiotic biosynthesis monooxygenase
BMWSH_1733	COG2312	Erythromycin esterase
BMWSH_1735	COG0561	phosphatase activity
BMWSH_1755	COG1904	glucuronate isomerase
BMWSH_1757	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_1758	COG1606	tRNA processing
BMWSH_1760	COG1691	(AIR) carboxylase
BMWSH_1761	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
BMWSH_1762	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
BMWSH_1763	COG2211	Major facilitator Superfamily
BMWSH_1765	COG0659	secondary active sulfate transmembrane transporter activity
BMWSH_1775	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BMWSH_1777	COG1278	Cold shock
BMWSH_1779	COG1278	Cold shock
BMWSH_1780	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BMWSH_1781	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
BMWSH_1783	COG4807	Protein conserved in bacteria
BMWSH_1793	COG2808	Putative FMN-binding domain
BMWSH_1795	COG0346	lactoylglutathione lyase activity
BMWSH_1797	COG2304	oxidoreductase activity
BMWSH_1800	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMWSH_1801	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BMWSH_1802	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BMWSH_1803	COG1733	regulation of RNA biosynthetic process
BMWSH_1806	COG0726	polysaccharide deacetylase
BMWSH_1807	COG1704	LemA family
BMWSH_1811	COG1012	belongs to the aldehyde dehydrogenase family
BMWSH_1812	COG0778	Nitroreductase
BMWSH_1815	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BMWSH_1817	COG2723	6-phospho-beta-galactosidase activity
BMWSH_1823	COG2814	Major facilitator Superfamily
BMWSH_1824	COG0583	DNA-binding transcription factor activity
BMWSH_1826	COG3695	enzyme binding
BMWSH_1828	COG1280	lysine exporter protein (LysE YggA)
BMWSH_1834	COG2723	6-phospho-beta-galactosidase activity
BMWSH_1836	COG2188	Transcriptional regulator
BMWSH_1840	COG0583	DNA-binding transcription factor activity
BMWSH_1847	COG1937	Protein conserved in bacteria
BMWSH_1848	COG0425	Belongs to the sulfur carrier protein TusA family
BMWSH_1849	COG2210	Belongs to the sulfur carrier protein TusA family
BMWSH_1854	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BMWSH_1855	COG0412	Dienelactone hydrolase
BMWSH_1857	COG0577	efflux transmembrane transporter activity
BMWSH_1858	COG1136	(ABC) transporter
BMWSH_1859	COG2205	protein histidine kinase activity
BMWSH_1860	COG0745	RESPONSE REGULATOR receiver
BMWSH_1861	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BMWSH_1868	COG1073	alpha beta
BMWSH_1869	COG0405	Gamma-glutamyltransferase
BMWSH_1875	COG2824	Alkylphosphonate utilization operon protein PhnA
BMWSH_1876	COG1301	dicarboxylic acid transport
BMWSH_1879	COG0583	DNA-binding transcription factor activity
BMWSH_1896	COG0697	spore germination
BMWSH_1897	COG0697	spore germination
BMWSH_1899	COG4989	oxidoreductase activity
BMWSH_1905	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BMWSH_1906	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMWSH_1907	COG5002	protein histidine kinase activity
BMWSH_1910	COG0384	phenazine biosynthesis protein PhzF
BMWSH_1912	COG3850	Histidine kinase
BMWSH_1912	COG5002	protein histidine kinase activity
BMWSH_1913	COG0577	efflux transmembrane transporter activity
BMWSH_1914	COG1136	(ABC) transporter
BMWSH_1916	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BMWSH_1917	COG0346	lactoylglutathione lyase activity
BMWSH_1922	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BMWSH_1924	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
BMWSH_1928	COG1819	glycosyl
BMWSH_1932	COG3209	COG3209 Rhs family protein
BMWSH_1936	COG4585	Histidine kinase
BMWSH_1937	COG1917	Cupin 2, conserved barrel domain protein
BMWSH_1937	COG2207	Transcriptional regulator
BMWSH_1938	COG1280	lysine exporter protein (LysE YggA)
BMWSH_1942	COG3546	catalase activity
BMWSH_1948	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BMWSH_1949	COG3773	Cell wall hydrolase
BMWSH_1963	COG1959	2 iron, 2 sulfur cluster binding
BMWSH_1964	COG1609	Transcriptional regulator
BMWSH_1965	COG0861	Integral membrane protein TerC family
BMWSH_1966	COG1396	sequence-specific DNA binding
BMWSH_1967	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
BMWSH_1969	COG1193	negative regulation of DNA recombination
BMWSH_1976	COG2249	NAD(P)H dehydrogenase (quinone) activity
BMWSH_1982	COG3773	Cell wall hydrolase
BMWSH_1983	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BMWSH_1984	COG4605	iron ion homeostasis
BMWSH_1990	COG2910	NAD(P)H-binding
BMWSH_1993	COG2323	membrane
BMWSH_1994	COG1278	Cold shock
BMWSH_1995	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BMWSH_1996	COG2076	Multidrug Resistance protein
BMWSH_1999	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BMWSH_2007	COG0501	Belongs to the peptidase M48B family
BMWSH_2009	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
BMWSH_2013	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BMWSH_2019	COG2130	NADP-dependent
BMWSH_2021	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
BMWSH_2023	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMWSH_2024	COG0730	response to heat
BMWSH_2025	COG3764	Sortase (surface protein transpeptidase)
BMWSH_2031	COG0531	amino acid
BMWSH_2032	COG1280	lysine exporter protein (LysE YggA)
BMWSH_2045	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BMWSH_2046	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BMWSH_2048	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BMWSH_2052	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMWSH_2053	COG1316	TRANSCRIPTIONal
BMWSH_2055	COG1228	amidohydrolase
BMWSH_2057	COG2814	Major facilitator Superfamily
BMWSH_2061	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BMWSH_2063	COG1902	pentaerythritol trinitrate reductase activity
BMWSH_2066	COG1819	glycosyl
BMWSH_2073	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMWSH_2074	COG0789	Transcriptional regulator
BMWSH_2075	COG1846	Transcriptional regulator
BMWSH_2076	COG0477	Major facilitator Superfamily
BMWSH_2079	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BMWSH_2080	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BMWSH_2082	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_2083	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMWSH_2085	COG2746	aminoglycoside 3-N-acetyltransferase activity
BMWSH_2086	COG0281	malic enzyme
BMWSH_2091	COG1959	2 iron, 2 sulfur cluster binding
BMWSH_2092	COG0531	amino acid
BMWSH_2096	COG0640	Transcriptional regulator
BMWSH_2100	COG1396	sequence-specific DNA binding
BMWSH_2101	COG0252	asparaginase activity
BMWSH_2102	COG1027	Aspartate ammonia-lyase
BMWSH_2105	COG0740	serine-type endopeptidase activity
BMWSH_2108	COG2261	transglycosylase associated protein
BMWSH_2109	COG1366	Belongs to the anti-sigma-factor antagonist family
BMWSH_2115	COG1366	Belongs to the anti-sigma-factor antagonist family
BMWSH_2116	COG1366	Belongs to the anti-sigma-factor antagonist family
BMWSH_2116	COG2202	Pas domain
BMWSH_2120	COG0583	DNA-binding transcription factor activity
BMWSH_2122	COG0372	Belongs to the citrate synthase family
BMWSH_2124	COG1597	lipid kinase activity
BMWSH_2125	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BMWSH_2127	COG2211	Major facilitator Superfamily
BMWSH_2130	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BMWSH_2131	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
BMWSH_2134	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BMWSH_2135	COG2318	DinB family
BMWSH_2137	COG2002	toxin-antitoxin pair type II binding
BMWSH_2138	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BMWSH_2139	COG0860	N-Acetylmuramoyl-L-alanine amidase
BMWSH_2139	COG3103	Sh3 type 3 domain protein
BMWSH_2139	COG4991	sh3 domain protein
BMWSH_2142	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BMWSH_2145	COG0778	Nitroreductase
BMWSH_2147	COG0640	Transcriptional regulator
BMWSH_2155	COG2205	protein histidine kinase activity
BMWSH_2158	COG1902	pentaerythritol trinitrate reductase activity
BMWSH_2159	COG0730	response to heat
BMWSH_2167	COG0733	neurotransmitter:sodium symporter activity
BMWSH_2169	COG0753	catalase activity
BMWSH_2170	COG0791	NLP P60 protein
BMWSH_2170	COG1388	LysM domain
BMWSH_2171	COG0011	TIGRFAM Protein of
BMWSH_2172	COG2508	Transcriptional regulator
BMWSH_2173	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BMWSH_2174	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BMWSH_2176	COG2059	Chromate
BMWSH_2177	COG2059	Chromate
BMWSH_2179	COG1605	Chorismate mutase
BMWSH_2179	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
BMWSH_2181	COG0287	Prephenate dehydrogenase
BMWSH_2183	COG0723	plastoquinol--plastocyanin reductase activity
BMWSH_2183	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BMWSH_2187	COG0517	IMP dehydrogenase activity
BMWSH_2187	COG0516	GMP reductase activity
BMWSH_2190	COG1253	flavin adenine dinucleotide binding
BMWSH_2191	COG5577	PFAM Coat F domain
BMWSH_2193	COG0783	Belongs to the Dps family
BMWSH_2197	COG4195	phage-related replication protein
BMWSH_2202	COG1132	(ABC) transporter
BMWSH_2206	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BMWSH_2207	COG0697	spore germination
BMWSH_2208	COG2244	polysaccharide biosynthetic process
BMWSH_2209	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BMWSH_2210	COG0400	carboxylic ester hydrolase activity
BMWSH_2213	COG0586	Pfam SNARE associated Golgi protein
BMWSH_2214	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BMWSH_2215	COG0778	Nitroreductase
BMWSH_2216	COG3584	3D domain protein
BMWSH_2216	COG1388	LysM domain
BMWSH_2217	COG0791	NLP P60 protein
BMWSH_2217	COG1388	LysM domain
BMWSH_2218	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BMWSH_2220	COG0831	urea catabolic process
BMWSH_2221	COG0832	Belongs to the urease beta subunit family
BMWSH_2223	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
BMWSH_2232	COG1215	transferase activity, transferring glycosyl groups
BMWSH_2233	COG1233	COG1233 Phytoene dehydrogenase and related
BMWSH_2237	COG2404	hydrolase activity, acting on ester bonds
BMWSH_2238	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_2240	COG0531	amino acid
BMWSH_2242	COG1492	cobalamin metabolic process
BMWSH_2243	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BMWSH_2244	COG4604	ABC transporter, ATP-binding protein
BMWSH_2252	COG1960	acyl-CoA dehydrogenase activity
BMWSH_2253	COG0456	acetyltransferase
BMWSH_2253	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BMWSH_2256	COG0596	Alpha beta hydrolase
BMWSH_2259	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
BMWSH_2260	COG0004	ammonium transporteR
BMWSH_2261	COG0347	Belongs to the P(II) protein family
BMWSH_2264	COG0559	Belongs to the binding-protein-dependent transport system permease family
BMWSH_2272	COG2311	Membrane
BMWSH_2274	COG1764	response to oxidative stress
BMWSH_2275	COG2814	Major facilitator Superfamily
BMWSH_2276	COG2814	Major facilitator Superfamily
BMWSH_2279	COG0508	dehydrogenase complex catalyzes the overall conversion of
BMWSH_2282	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BMWSH_2283	COG5002	protein histidine kinase activity
BMWSH_2285	COG1876	peptidase activity
BMWSH_2286	COG2323	membrane
BMWSH_2288	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BMWSH_2290	COG0598	Magnesium transport protein CorA
BMWSH_2291	COG1366	Belongs to the anti-sigma-factor antagonist family
BMWSH_2292	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BMWSH_2293	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BMWSH_2296	COG4682	membrane
BMWSH_2301	COG1595	DNA-templated transcription, initiation
BMWSH_2305	COG1131	(ABC) transporter
BMWSH_2306	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BMWSH_2311	COG1620	l-lactate permease
BMWSH_2313	COG0277	FAD linked oxidase domain protein
BMWSH_2314	COG0247	lactate metabolic process
BMWSH_2315	COG0277	FAD linked oxidase domain protein
BMWSH_2316	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BMWSH_2317	COG0179	Fumarylacetoacetate (FAA) hydrolase
BMWSH_2318	COG1414	Transcriptional regulator
BMWSH_2319	COG2309	aminopeptidase activity
BMWSH_2320	COG0582	viral genome integration into host DNA
BMWSH_2332	COG2309	aminopeptidase activity
BMWSH_2339	COG0668	transmembrane transport
BMWSH_2345	COG0561	phosphatase activity
BMWSH_2346	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
BMWSH_2347	COG0579	oxidoreductase
BMWSH_2353	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BMWSH_2356	COG0747	negative chemotaxis
BMWSH_2357	COG0601	transmembrane transport
BMWSH_2358	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BMWSH_2360	COG4608	Belongs to the ABC transporter superfamily
BMWSH_2364	COG4325	translation initiation factor activity
BMWSH_2366	COG1253	flavin adenine dinucleotide binding
BMWSH_2367	COG0025	NhaP-type Na H and K H
BMWSH_2373	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_2383	COG0583	DNA-binding transcription factor activity
BMWSH_2384	COG1979	alcohol dehydrogenase
BMWSH_2387	COG2391	methyltransferase activity
BMWSH_2392	COG2031	fatty acid transporter
BMWSH_2396	COG2182	Extracellular solute-binding protein
BMWSH_2397	COG5444	nuclease activity
BMWSH_2401	COG1742	UPF0060 membrane protein
BMWSH_2402	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BMWSH_2403	COG0501	Belongs to the peptidase M48B family
BMWSH_2404	COG1695	Transcriptional regulator
BMWSH_2406	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BMWSH_2411	COG1061	Type III restriction enzyme res subunit
BMWSH_2412	COG2390	Transcriptional regulator
BMWSH_2415	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BMWSH_2416	COG0295	cytidine deaminase activity
BMWSH_2417	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BMWSH_2421	COG3152	Membrane
BMWSH_2422	COG3152	Membrane
BMWSH_2423	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BMWSH_2424	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BMWSH_2429	COG3152	Membrane
BMWSH_2430	COG1454	alcohol dehydrogenase
BMWSH_2431	COG3835	regulator
BMWSH_2432	COG2610	gluconate transmembrane transporter activity
BMWSH_2433	COG1929	Belongs to the glycerate kinase type-1 family
BMWSH_2434	COG0596	Alpha beta hydrolase
BMWSH_2439	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BMWSH_2447	COG1486	melibiose metabolic process
BMWSH_2452	COG5444	nuclease activity
BMWSH_2466	COG0579	oxidoreductase
BMWSH_2468	COG2318	DinB family
BMWSH_2476	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BMWSH_2479	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BMWSH_2482	COG3340	Belongs to the peptidase S51 family
BMWSH_2487	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BMWSH_2488	COG3584	3D domain protein
BMWSH_2488	COG1388	LysM domain
BMWSH_2489	COG2814	Major facilitator Superfamily
BMWSH_2490	COG2323	membrane
BMWSH_2491	COG3279	Response regulator of the LytR AlgR family
BMWSH_2492	COG0427	acetyl-CoA hydrolase
BMWSH_2494	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_2500	COG1278	Cold shock
BMWSH_2501	COG0028	Belongs to the TPP enzyme family
BMWSH_2502	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BMWSH_2503	COG1278	Cold shock
BMWSH_2504	COG2084	Dehydrogenase
BMWSH_2506	COG1131	(ABC) transporter
BMWSH_2507	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BMWSH_2510	COG0737	Belongs to the 5'-nucleotidase family
BMWSH_2511	COG2310	stress, protein
BMWSH_2512	COG2310	stress, protein
BMWSH_2513	COG2310	stress, protein
BMWSH_2515	COG3853	Toxic anion resistance protein (TelA)
BMWSH_2517	COG1349	DNA-binding transcription factor activity
BMWSH_2518	COG0673	inositol 2-dehydrogenase activity
BMWSH_2521	COG0708	Exodeoxyribonuclease III
BMWSH_2522	COG1846	Transcriptional regulator
BMWSH_2524	COG1566	PFAM secretion protein HlyD family protein
BMWSH_2525	COG0534	Mate efflux family protein
BMWSH_2529	COG5444	nuclease activity
BMWSH_2545	COG0531	amino acid
BMWSH_2546	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BMWSH_2548	COG3153	acetyltransferase
BMWSH_2548	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BMWSH_2549	COG0584	glycerophosphoryl diester phosphodiesterase
BMWSH_2550	COG1515	deoxyribonuclease V activity
BMWSH_2551	COG0586	Pfam SNARE associated Golgi protein
BMWSH_2553	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BMWSH_2561	COG2197	response regulator
BMWSH_2563	COG1131	(ABC) transporter
BMWSH_2567	COG2610	gluconate transmembrane transporter activity
BMWSH_2569	COG0693	protein deglycase activity
BMWSH_2570	COG3835	regulator
BMWSH_2571	COG0277	FAD linked oxidase domain protein
BMWSH_2572	COG0247	lactate metabolic process
BMWSH_2573	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BMWSH_2577	COG0679	Auxin Efflux Carrier
BMWSH_2578	COG0583	DNA-binding transcription factor activity
BMWSH_2579	COG0163	prenyltransferase activity
BMWSH_2580	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BMWSH_2584	COG2271	Major facilitator Superfamily
BMWSH_2585	COG1473	amidohydrolase
BMWSH_2586	COG0281	malic enzyme
BMWSH_2587	COG0679	Auxin Efflux Carrier
BMWSH_2588	COG1252	NADH dehydrogenase
BMWSH_2591	COG0004	ammonium transporteR
BMWSH_2593	COG1114	Component of the transport system for branched-chain amino acids
BMWSH_2595	COG1363	Peptidase, m42
BMWSH_2602	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
BMWSH_2603	COG0860	N-Acetylmuramoyl-L-alanine amidase
BMWSH_2605	COG0531	amino acid
BMWSH_2606	COG4282	regulation of fungal-type cell wall biogenesis
BMWSH_2609	COG0745	RESPONSE REGULATOR receiver
BMWSH_2610	COG0659	secondary active sulfate transmembrane transporter activity
BMWSH_2611	COG0288	reversible hydration of carbon dioxide
BMWSH_2613	COG0789	Transcriptional regulator
BMWSH_2614	COG2814	Major facilitator Superfamily
BMWSH_2616	COG2814	Major facilitator Superfamily
BMWSH_2617	COG1115	amino acid carrier protein
BMWSH_2619	COG1295	ribonuclease BN
BMWSH_2622	COG1302	Protein conserved in bacteria
BMWSH_2623	COG1683	Conserved Protein
BMWSH_2624	COG2814	Major facilitator Superfamily
BMWSH_2627	COG1183	phosphatidylcholine synthase activity
BMWSH_2644	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
BMWSH_2649	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BMWSH_2650	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BMWSH_2656	COG0824	Thioesterase
BMWSH_2657	COG4841	protein insertion into membrane
BMWSH_2658	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BMWSH_2659	COG1832	CoA-binding protein
BMWSH_2660	COG0187	DNA topoisomerase II activity
BMWSH_2661	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BMWSH_2662	COG2267	carboxylic ester hydrolase activity
BMWSH_2663	COG1280	lysine exporter protein (LysE YggA)
BMWSH_2664	COG3403	YqcI/YcgG family
BMWSH_2666	COG1335	isochorismatase
BMWSH_2667	COG1247	-acetyltransferase
BMWSH_2668	COG0833	amino acid
BMWSH_2670	COG4819	ethanolamine utilization protein
BMWSH_2671	COG4303	Ethanolamine ammonia lyase large subunit
BMWSH_2672	COG4302	ethanolamine ammonia-lyase activity
BMWSH_2673	COG0531	amino acid
BMWSH_2677	COG4974	Belongs to the 'phage' integrase family
BMWSH_2679	COG1846	Transcriptional regulator
BMWSH_2683	COG1914	H( )-stimulated, divalent metal cation uptake system
BMWSH_2686	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMWSH_2689	COG2233	PERMEase
BMWSH_2690	COG0204	Acyl-transferase
BMWSH_2692	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BMWSH_2696	COG1227	inorganic diphosphatase activity
BMWSH_2697	COG2267	carboxylic ester hydrolase activity
BMWSH_2698	COG0129	dihydroxy-acid dehydratase activity
BMWSH_2699	COG2153	protein acetylation
BMWSH_2701	COG0697	spore germination
BMWSH_2705	COG2203	Gaf domain
BMWSH_2705	COG4585	Histidine kinase
BMWSH_2706	COG2197	response regulator
BMWSH_2707	COG0431	NADPH-dependent FMN reductase
BMWSH_2709	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BMWSH_2711	COG0183	Belongs to the thiolase family
BMWSH_2712	COG1268	BioY protein
BMWSH_2713	COG0318	PFAM AMP-dependent synthetase and ligase
BMWSH_2721	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
BMWSH_2722	COG1914	H( )-stimulated, divalent metal cation uptake system
BMWSH_2724	COG1984	allophanate hydrolase subunit 2
BMWSH_2725	COG0511	ligase activity, forming carbon-carbon bonds
BMWSH_2726	COG0439	Biotin carboxylase
BMWSH_2727	COG1414	Transcriptional regulator
BMWSH_2728	COG1587	Uroporphyrinogen-III synthase
BMWSH_2729	COG3883	PFAM NLP P60 protein
BMWSH_2729	COG0791	NLP P60 protein
BMWSH_2730	COG3663	DNA glycosylase
BMWSH_2731	COG1408	metallophosphoesterase
BMWSH_2733	COG0622	Phosphoesterase
BMWSH_2735	COG0840	transmembrane signaling receptor activity
BMWSH_2737	COG0277	FAD linked oxidase domain protein
BMWSH_2738	COG2271	Major facilitator Superfamily
BMWSH_2740	COG5609	conserved protein (DUF2294)
BMWSH_2741	COG2116	formate transmembrane transporter activity
BMWSH_2746	COG0076	glutamate decarboxylase activity
BMWSH_2756	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BMWSH_2757	COG2720	vancomycin resistance protein
BMWSH_2758	COG1846	Transcriptional regulator
BMWSH_2759	COG0318	PFAM AMP-dependent synthetase and ligase
BMWSH_2760	COG0702	epimerase
BMWSH_2761	COG0494	nUDIX hydrolase
BMWSH_2764	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BMWSH_2778	COG1136	(ABC) transporter
BMWSH_2779	COG3011	Protein conserved in bacteria
BMWSH_2782	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BMWSH_2784	COG2015	COG2015, Alkyl sulfatase and related hydrolases
BMWSH_2785	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BMWSH_2789	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BMWSH_2790	COG0697	spore germination
BMWSH_2793	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BMWSH_2815	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BMWSH_2816	COG0326	Molecular chaperone. Has ATPase activity
BMWSH_2818	COG3739	integral membrane protein
BMWSH_2819	COG2368	4-hydroxyphenylacetate
BMWSH_2821	COG3386	PFAM SMP-30 Gluconolaconase
BMWSH_2823	COG2267	carboxylic ester hydrolase activity
BMWSH_2827	COG0640	Transcriptional regulator
BMWSH_2828	COG3832	glyoxalase III activity
BMWSH_2830	COG1366	Belongs to the anti-sigma-factor antagonist family
BMWSH_2830	COG2202	Pas domain
BMWSH_2832	COG1033	growth of symbiont in host cell
BMWSH_2832	COG2409	Drug exporters of the RND superfamily
BMWSH_2833	COG1846	Transcriptional regulator
BMWSH_2834	COG2814	Major facilitator Superfamily
BMWSH_2835	COG0531	amino acid
BMWSH_2837	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BMWSH_2838	COG3119	arylsulfatase activity
BMWSH_2840	COG3773	Cell wall hydrolase
BMWSH_2841	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BMWSH_2843	COG3977	Valine--pyruvate aminotransferase
BMWSH_2847	COG1181	Belongs to the D-alanine--D-alanine ligase family
BMWSH_2849	COG0738	Major facilitator superfamily
BMWSH_2850	COG1979	alcohol dehydrogenase
BMWSH_2853	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BMWSH_2855	COG0833	amino acid
BMWSH_2857	COG1509	lysine 2,3-aminomutase activity
BMWSH_2862	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BMWSH_2863	COG0183	Belongs to the thiolase family
BMWSH_2864	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BMWSH_2865	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BMWSH_2867	COG1141	Ferredoxin
BMWSH_2870	COG1024	Enoyl-CoA hydratase
BMWSH_2871	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_2872	COG1960	acyl-CoA dehydrogenase activity
BMWSH_2873	COG2045	Belongs to the ComB family
BMWSH_2876	COG1024	Enoyl-CoA hydratase
BMWSH_2877	COG1250	3-hydroxyacyl-CoA dehydrogenase
BMWSH_2879	COG0318	PFAM AMP-dependent synthetase and ligase
BMWSH_2880	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_2883	COG4191	Histidine kinase
BMWSH_2885	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BMWSH_2887	COG0019	diaminopimelate decarboxylase activity
BMWSH_2888	COG1301	dicarboxylic acid transport
BMWSH_2891	COG0583	DNA-binding transcription factor activity
BMWSH_2897	COG2195	Cleaves the N-terminal amino acid of tripeptides
BMWSH_2898	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_2899	COG2610	gluconate transmembrane transporter activity
BMWSH_2902	COG2851	Citrate transporter
BMWSH_2903	COG4565	transcriptional regulatory protein
BMWSH_2904	COG3290	protein histidine kinase activity
BMWSH_2905	COG3290	protein histidine kinase activity
BMWSH_2906	COG3290	protein histidine kinase activity
BMWSH_2907	COG0300	oxidoreductase activity
BMWSH_2909	COG0778	Nitroreductase
BMWSH_2917	COG5002	protein histidine kinase activity
BMWSH_2919	COG3409	Peptidoglycan-binding domain 1 protein
BMWSH_2919	COG3757	hydrolase, family 25
BMWSH_2921	COG0114	fumarate hydratase activity
BMWSH_2925	COG2176	DNA-directed DNA polymerase activity
BMWSH_2928	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BMWSH_2931	COG1366	Belongs to the anti-sigma-factor antagonist family
BMWSH_2933	COG0346	lactoylglutathione lyase activity
BMWSH_2940	COG1295	ribonuclease BN
BMWSH_2942	COG1834	amidinotransferase
BMWSH_2944	COG2409	Drug exporters of the RND superfamily
BMWSH_2947	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BMWSH_2950	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BMWSH_2951	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BMWSH_2952	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BMWSH_2953	COG5002	protein histidine kinase activity
BMWSH_2957	COG1388	LysM domain
BMWSH_2957	COG3584	3D domain protein
BMWSH_2959	COG3478	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
BMWSH_2963	COG1846	Transcriptional regulator
BMWSH_2964	COG1764	response to oxidative stress
BMWSH_2967	COG1595	DNA-templated transcription, initiation
BMWSH_2969	COG1131	(ABC) transporter
BMWSH_2970	COG1725	Transcriptional regulator
BMWSH_2971	COG0583	DNA-binding transcription factor activity
BMWSH_2972	COG2814	Major facilitator Superfamily
BMWSH_2976	COG1575	Belongs to the MenA family. Type 1 subfamily
BMWSH_2984	COG0514	ATP-dependent DNA helicase (RecQ)
BMWSH_2993	COG2720	vancomycin resistance protein
BMWSH_2994	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMWSH_2995	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMWSH_2997	COG0697	spore germination
BMWSH_2999	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BMWSH_3000	COG1757	Na H antiporter
BMWSH_3001	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BMWSH_3002	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BMWSH_3007	COG0446	pyridine nucleotide-disulphide oxidoreductase
BMWSH_3009	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BMWSH_3009	COG0551	DNA topoisomerase type I activity
BMWSH_3013	COG1533	DNA photolyase activity
BMWSH_3015	COG1609	Transcriptional regulator
BMWSH_3017	COG1757	Na H antiporter
BMWSH_3018	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BMWSH_3019	COG1131	(ABC) transporter
BMWSH_3022	COG0531	amino acid
BMWSH_3023	COG0697	spore germination
BMWSH_3025	COG0488	(ABC) transporter
BMWSH_3026	COG0697	spore germination
BMWSH_3027	COG0662	Cupin 2, conserved barrel domain protein
BMWSH_3027	COG2207	Transcriptional regulator
BMWSH_3029	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BMWSH_3030	COG2223	nitrite transmembrane transporter activity
BMWSH_3031	COG1254	Belongs to the acylphosphatase family
BMWSH_3032	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_3033	COG1404	Belongs to the peptidase S8 family
BMWSH_3034	COG1098	S1 RNA binding domain
BMWSH_3035	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BMWSH_3036	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BMWSH_3037	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BMWSH_3038	COG1335	isochorismatase
BMWSH_3039	COG0494	nUDIX hydrolase
BMWSH_3042	COG1396	sequence-specific DNA binding
BMWSH_3046	COG3541	Predicted nucleotidyltransferase
BMWSH_3051	COG1279	arginine transmembrane transporter activity
BMWSH_3052	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BMWSH_3059	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_3060	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BMWSH_3061	COG1378	Sugar-specific transcriptional regulator TrmB
BMWSH_3064	COG0384	phenazine biosynthesis protein PhzF
BMWSH_3066	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BMWSH_3066	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BMWSH_3068	COG1657	PFAM Prenyltransferase squalene oxidase
BMWSH_3071	COG1119	ATPase activity
BMWSH_3072	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMWSH_3073	COG1994	Peptidase M50
BMWSH_3074	COG2207	Transcriptional regulator
BMWSH_3077	COG0697	spore germination
BMWSH_3078	COG4548	von Willebrand factor, type A
BMWSH_3079	COG0714	Associated with various cellular activities
BMWSH_3080	COG4873	Protein conserved in bacteria
BMWSH_3081	COG1595	DNA-templated transcription, initiation
BMWSH_3086	COG3871	stress protein (general stress protein 26)
BMWSH_3089	COG2814	Major facilitator Superfamily
BMWSH_3091	COG0454	-acetyltransferase
BMWSH_3094	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BMWSH_3096	COG2094	Belongs to the DNA glycosylase MPG family
BMWSH_3097	COG1082	Xylose isomerase domain protein TIM barrel
BMWSH_3098	COG0673	inositol 2-dehydrogenase activity
BMWSH_3102	COG3773	Cell wall hydrolase
BMWSH_3103	COG0733	neurotransmitter:sodium symporter activity
BMWSH_3107	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BMWSH_3108	COG1012	belongs to the aldehyde dehydrogenase family
BMWSH_3109	COG0640	Transcriptional regulator
BMWSH_3110	COG0300	oxidoreductase activity
BMWSH_3113	COG1233	COG1233 Phytoene dehydrogenase and related
BMWSH_3114	COG2032	superoxide dismutase activity
BMWSH_3117	COG0527	aspartate kinase activity
BMWSH_3118	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BMWSH_3118	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMWSH_3118	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BMWSH_3119	COG1105	Belongs to the carbohydrate kinase PfkB family
BMWSH_3120	COG1349	DNA-binding transcription factor activity
BMWSH_3123	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BMWSH_3127	COG2205	protein histidine kinase activity
BMWSH_3128	COG0745	RESPONSE REGULATOR receiver
BMWSH_3131	COG4208	sulfate ABC transporter
BMWSH_3132	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
BMWSH_3134	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
BMWSH_3136	COG5583	Uncharacterized small protein (DUF2292)
BMWSH_3137	COG5002	protein histidine kinase activity
BMWSH_3138	COG0745	RESPONSE REGULATOR receiver
BMWSH_3139	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BMWSH_3140	COG2246	polysaccharide biosynthetic process
BMWSH_3141	COG0463	Glycosyl transferase, family 2
BMWSH_3142	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BMWSH_3146	COG1366	Belongs to the anti-sigma-factor antagonist family
BMWSH_3147	COG1346	cytolysis
BMWSH_3148	COG1380	Effector of murein hydrolase LrgA
BMWSH_3149	COG1846	Transcriptional regulator
BMWSH_3151	COG3546	catalase activity
BMWSH_3153	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BMWSH_3156	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BMWSH_3157	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BMWSH_3161	COG0493	'glutamate synthase
BMWSH_3162	COG0069	glutamate synthase activity
BMWSH_3162	COG0067	glutamate synthase
BMWSH_3162	COG0070	glutamate synthase
BMWSH_3163	COG0583	DNA-binding transcription factor activity
BMWSH_3170	COG0789	Transcriptional regulator
BMWSH_3174	COG4195	phage-related replication protein
BMWSH_3175	COG0109	protoheme IX farnesyltransferase activity
BMWSH_3176	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BMWSH_3179	COG3428	Bacterial PH domain
BMWSH_3180	COG3402	PFAM membrane-flanked domain
BMWSH_3181	COG0281	malic enzyme
BMWSH_3182	COG1611	Belongs to the LOG family
BMWSH_3187	COG0738	Major facilitator superfamily
BMWSH_3188	COG0363	glucosamine-6-phosphate deaminase activity
BMWSH_3192	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BMWSH_3193	COG2140	Oxalate decarboxylase
BMWSH_3194	COG1070	Carbohydrate kinase
BMWSH_3199	COG0860	N-Acetylmuramoyl-L-alanine amidase
BMWSH_3201	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BMWSH_3202	COG0196	riboflavin kinase activity
BMWSH_3203	COG1126	abc transporter atp-binding protein
BMWSH_3204	COG0765	amino acid transport
BMWSH_3205	COG0765	amino acid transport
BMWSH_3206	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BMWSH_3207	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BMWSH_3210	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BMWSH_3212	COG0561	phosphatase activity
BMWSH_3213	COG3493	citrate carrier protein
BMWSH_3214	COG0281	malic enzyme
BMWSH_3216	COG3104	oligopeptide transport
BMWSH_3217	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BMWSH_3218	COG5002	protein histidine kinase activity
BMWSH_3219	COG0745	RESPONSE REGULATOR receiver
BMWSH_3221	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BMWSH_3222	COG3594	Acyltransferase
BMWSH_3224	COG0833	amino acid
BMWSH_3227	COG1757	Na H antiporter
BMWSH_3228	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BMWSH_3229	COG3361	conserved protein (COG2071)
BMWSH_3232	COG1360	Flagellar Motor Protein
BMWSH_3233	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BMWSH_3236	COG2112	serine threonine protein kinase
BMWSH_3237	COG2124	cytochrome p450
BMWSH_3238	COG1012	belongs to the aldehyde dehydrogenase family
BMWSH_3239	COG1523	belongs to the glycosyl hydrolase 13 family
BMWSH_3240	COG1823	symporter activity
BMWSH_3243	COG5002	protein histidine kinase activity
BMWSH_3244	COG2234	aminopeptidase activity
BMWSH_3246	COG0726	polysaccharide deacetylase
BMWSH_3250	COG3853	Toxic anion resistance protein (TelA)
BMWSH_3252	COG1368	sulfuric ester hydrolase activity
BMWSH_3256	COG0463	Glycosyl transferase, family 2
BMWSH_3260	COG0534	Mate efflux family protein
BMWSH_3261	COG2002	toxin-antitoxin pair type II binding
BMWSH_3266	COG1595	DNA-templated transcription, initiation
BMWSH_3267	COG3011	Protein conserved in bacteria
BMWSH_3269	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BMWSH_3270	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BMWSH_3271	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BMWSH_3273	COG0322	excinuclease ABC activity
BMWSH_3274	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BMWSH_3278	COG2962	Rard protein
BMWSH_3279	COG2096	Adenosyltransferase
BMWSH_3281	COG0406	alpha-ribazole phosphatase activity
BMWSH_3282	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
BMWSH_3283	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
BMWSH_3284	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BMWSH_3285	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
BMWSH_3287	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BMWSH_3288	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BMWSH_3290	COG2521	methyltransferase
BMWSH_3290	COG2136	Putative SAM-dependent methyltransferase
BMWSH_3292	COG0726	polysaccharide deacetylase
BMWSH_3293	COG1413	lyase activity
BMWSH_3294	COG0488	(ABC) transporter
BMWSH_3295	COG1418	mRNA catabolic process
BMWSH_3296	COG0386	Belongs to the glutathione peroxidase family
BMWSH_3299	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
BMWSH_3306	COG0726	polysaccharide deacetylase
BMWSH_3308	COG1876	peptidase activity
BMWSH_3309	COG0561	phosphatase activity
BMWSH_3312	COG5566	PFAM Mor transcription activator
BMWSH_3319	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BMWSH_3319	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BMWSH_3320	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BMWSH_3320	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BMWSH_3321	COG1733	regulation of RNA biosynthetic process
BMWSH_3322	COG2814	Major facilitator Superfamily
BMWSH_3323	COG0473	3-isopropylmalate dehydrogenase activity
BMWSH_3324	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BMWSH_3327	COG2323	membrane
BMWSH_3328	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
BMWSH_3329	COG2050	protein possibly involved in aromatic compounds catabolism
BMWSH_3331	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BMWSH_3332	COG0640	Transcriptional regulator
BMWSH_3340	COG2271	Major facilitator Superfamily
BMWSH_3341	COG1388	LysM domain
BMWSH_3343	COG2217	Heavy metal translocating P-type atpase
BMWSH_3344	COG2608	mercury ion transmembrane transporter activity
BMWSH_3345	COG1937	Protein conserved in bacteria
BMWSH_3346	COG0745	RESPONSE REGULATOR receiver
BMWSH_3347	COG5002	protein histidine kinase activity
BMWSH_3348	COG0589	response to stress
BMWSH_3354	COG2211	Major facilitator Superfamily
BMWSH_3357	COG2721	sulfolactate sulfo-lyase activity
BMWSH_3358	COG0246	Mannitol dehydrogenase
BMWSH_3359	COG1609	Transcriptional regulator
BMWSH_3360	COG2211	Major facilitator Superfamily
BMWSH_3361	COG1904	glucuronate isomerase
BMWSH_3362	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BMWSH_3363	COG0628	permease
BMWSH_3373	COG1063	alcohol dehydrogenase
BMWSH_3374	COG3284	Transcriptional regulator
BMWSH_3375	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BMWSH_3376	COG0508	dehydrogenase complex catalyzes the overall conversion of
BMWSH_3377	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BMWSH_3378	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BMWSH_3379	COG2252	PERMEase
BMWSH_3382	COG2072	flavoprotein involved in K transport
BMWSH_3383	COG1612	heme a metabolic process
BMWSH_3384	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_3385	COG0589	response to stress
BMWSH_3387	COG1845	cytochrome c oxidase, subunit III
BMWSH_3388	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BMWSH_3390	COG1309	transcriptional regulator
BMWSH_3394	COG0517	IMP dehydrogenase activity
BMWSH_3402	COG1012	belongs to the aldehyde dehydrogenase family
BMWSH_3406	COG0477	Major facilitator Superfamily
BMWSH_3409	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BMWSH_3410	COG4608	Belongs to the ABC transporter superfamily
BMWSH_3411	COG0444	Belongs to the ABC transporter superfamily
BMWSH_3414	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BMWSH_3415	COG3848	Pyruvate phosphate dikinase
BMWSH_3415	COG0574	Belongs to the PEP-utilizing enzyme family
BMWSH_3426	COG4282	regulation of fungal-type cell wall biogenesis
BMWSH_3428	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BMWSH_3434	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BMWSH_3436	COG2851	Citrate transporter
BMWSH_3439	COG2217	Heavy metal translocating P-type atpase
BMWSH_3442	COG0701	Predicted permease
BMWSH_3444	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BMWSH_3449	COG0789	Transcriptional regulator
BMWSH_3453	COG1733	regulation of RNA biosynthetic process
BMWSH_3463	COG2376	Dihydroxyacetone kinase
BMWSH_3466	COG2207	Transcriptional regulator
BMWSH_3467	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BMWSH_3469	COG0697	spore germination
BMWSH_3470	COG5553	Cysteine dioxygenase type I
BMWSH_3471	COG0346	lactoylglutathione lyase activity
BMWSH_3472	COG0640	Transcriptional regulator
BMWSH_3474	COG0640	Transcriptional regulator
BMWSH_3475	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BMWSH_3478	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMWSH_3480	COG2226	methyltransferase
BMWSH_3485	COG2855	membrane
BMWSH_3487	COG1376	ErfK ybiS ycfS ynhG family protein
BMWSH_3488	COG3858	chitin binding
BMWSH_3488	COG1388	LysM domain
BMWSH_3490	COG2172	sigma factor antagonist activity
BMWSH_3499	COG0028	Belongs to the TPP enzyme family
BMWSH_3501	COG1278	Cold shock
BMWSH_3512	COG2076	Multidrug Resistance protein
BMWSH_3518	COG3813	Protein conserved in bacteria
BMWSH_3519	COG1522	sequence-specific DNA binding
BMWSH_3521	COG1940	carbohydrate kinase activity
BMWSH_3523	COG2723	6-phospho-beta-galactosidase activity
BMWSH_3525	COG1447	Phosphotransferase system cellobiose-specific component IIA
BMWSH_3526	COG2188	Transcriptional regulator
BMWSH_3527	COG0861	Integral membrane protein TerC family
BMWSH_3528	COG1309	transcriptional regulator
BMWSH_3536	COG0318	PFAM AMP-dependent synthetase and ligase
BMWSH_3537	COG0387	Pfam Sodium calcium exchanger
BMWSH_3545	COG4977	sequence-specific DNA binding
BMWSH_3548	COG0697	spore germination
BMWSH_3550	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BMWSH_3552	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMWSH_3555	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_3562	COG0596	Alpha beta hydrolase
BMWSH_3562	COG2945	thiolester hydrolase activity
BMWSH_3563	COG0583	DNA-binding transcription factor activity
BMWSH_3569	COG2318	DinB family
BMWSH_3573	COG1388	LysM domain
BMWSH_3573	COG0791	NLP P60 protein
BMWSH_3577	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BMWSH_3580	COG2814	Major facilitator Superfamily
BMWSH_3581	COG1309	transcriptional regulator
BMWSH_3582	COG3848	Pyruvate phosphate dikinase
BMWSH_3582	COG0574	Belongs to the PEP-utilizing enzyme family
BMWSH_3594	COG0640	Transcriptional regulator
BMWSH_3595	COG0456	acetyltransferase
BMWSH_3596	COG1846	Transcriptional regulator
BMWSH_3597	COG2364	Membrane
BMWSH_3607	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BMWSH_3608	COG1288	antiporter activity
BMWSH_3610	COG1957	nucleoside hydrolase
BMWSH_3612	COG0010	Belongs to the arginase family
BMWSH_3613	COG1228	amidohydrolase
BMWSH_3615	COG2986	histidine ammonia-lyase
BMWSH_3616	COG0656	L-ascorbic acid biosynthetic process
BMWSH_3618	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BMWSH_3621	COG0024	Methionine aminopeptidase
BMWSH_3624	COG1464	Belongs to the NlpA lipoprotein family
BMWSH_3625	COG2011	ABC-type metal ion transport system permease component
BMWSH_3626	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BMWSH_3627	COG1464	Belongs to the NlpA lipoprotein family
BMWSH_3628	COG2011	ABC-type metal ion transport system permease component
BMWSH_3629	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BMWSH_3630	COG1464	Belongs to the NlpA lipoprotein family
BMWSH_3632	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BMWSH_3633	COG0765	amino acid transport
BMWSH_3634	COG0765	amino acid transport
BMWSH_3635	COG1621	beta-fructofuranosidase activity
BMWSH_3636	COG3716	PTS system mannose fructose sorbose family IID component
BMWSH_3637	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMWSH_3638	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BMWSH_3638	COG3933	PFAM sigma-54 factor interaction domain-containing protein
BMWSH_3639	COG1621	beta-fructofuranosidase activity
BMWSH_3641	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
BMWSH_3643	COG2223	nitrite transmembrane transporter activity
BMWSH_3644	COG1609	Transcriptional regulator
BMWSH_3648	COG1113	amino acid transport
BMWSH_3658	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BMWSH_3661	COG1113	amino acid transport
BMWSH_3662	COG1280	lysine exporter protein (LysE YggA)
BMWSH_3664	COG1012	belongs to the aldehyde dehydrogenase family
BMWSH_3667	COG2814	Major facilitator Superfamily
BMWSH_3669	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BMWSH_3670	COG0156	8-amino-7-oxononanoate synthase activity
BMWSH_3671	COG0477	Major facilitator Superfamily
BMWSH_3672	COG2193	ferroxidase activity
BMWSH_3673	COG1621	beta-fructofuranosidase activity
BMWSH_3674	COG1621	beta-fructofuranosidase activity
BMWSH_3675	COG0405	Gamma-glutamyltransferase
BMWSH_3677	COG1011	Hydrolase
BMWSH_3679	COG0531	amino acid
BMWSH_3681	COG2208	phosphoserine phosphatase activity
BMWSH_3682	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BMWSH_3687	COG4175	Glycine betaine
BMWSH_3687	COG3448	diguanylate cyclase activity
BMWSH_3689	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BMWSH_3691	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
BMWSH_3692	COG1733	regulation of RNA biosynthetic process
BMWSH_3693	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BMWSH_3697	COG2814	Major facilitator Superfamily
BMWSH_3700	COG1120	ATPase activity
BMWSH_3701	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BMWSH_3702	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BMWSH_3703	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BMWSH_3707	COG2814	Major facilitator Superfamily
BMWSH_3708	COG1566	PFAM secretion protein HlyD family protein
BMWSH_3709	COG1846	Transcriptional regulator
BMWSH_3711	COG1404	Belongs to the peptidase S8 family
BMWSH_3712	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BMWSH_3714	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_3717	COG2814	Major facilitator Superfamily
BMWSH_3720	COG1819	glycosyl
BMWSH_3721	COG1388	LysM domain
BMWSH_3721	COG0791	NLP P60 protein
BMWSH_3724	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BMWSH_3726	COG2205	protein histidine kinase activity
BMWSH_3727	COG3239	Fatty acid desaturase
BMWSH_3728	COG4585	Histidine kinase
BMWSH_3729	COG2197	response regulator
BMWSH_3734	COG1120	ATPase activity
BMWSH_3735	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BMWSH_3736	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BMWSH_3737	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BMWSH_3739	COG0701	Predicted permease
BMWSH_3740	COG3689	TIGRFAM TIGR03943 family protein
BMWSH_3745	COG4608	Belongs to the ABC transporter superfamily
BMWSH_3746	COG0791	NLP P60 protein
BMWSH_3747	COG1619	proteins homologs of microcin C7 resistance protein MccF
BMWSH_3748	COG4166	transmembrane transport
BMWSH_3749	COG0444	Belongs to the ABC transporter superfamily
BMWSH_3750	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BMWSH_3751	COG0601	transmembrane transport
BMWSH_3752	COG2362	D-Aminopeptidase
BMWSH_3753	COG2233	PERMEase
BMWSH_3755	COG2814	Major facilitator Superfamily
BMWSH_3756	COG2814	Major facilitator Superfamily
BMWSH_3757	COG2814	Major facilitator Superfamily
BMWSH_3762	COG0328	RNA-DNA hybrid ribonuclease activity
BMWSH_3763	COG0328	RNA-DNA hybrid ribonuclease activity
BMWSH_3768	COG3541	Predicted nucleotidyltransferase
BMWSH_3769	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BMWSH_3770	COG1755	Isoprenylcysteine carboxyl methyltransferase
BMWSH_3771	COG3424	synthase
BMWSH_3774	COG1012	belongs to the aldehyde dehydrogenase family
BMWSH_3776	COG0583	DNA-binding transcription factor activity
BMWSH_3777	COG2233	PERMEase
BMWSH_3778	COG2233	PERMEase
BMWSH_3780	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BMWSH_3781	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BMWSH_3782	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BMWSH_3783	COG1199	ATP-dependent helicase activity
BMWSH_3785	COG3842	ATPase activity
BMWSH_3787	COG1175	transmembrane transport
BMWSH_3791	COG0116	Belongs to the methyltransferase superfamily
BMWSH_3792	COG0366	Alpha amylase catalytic
BMWSH_3793	COG2197	response regulator
BMWSH_3798	COG3599	regulation of cell shape
BMWSH_3799	COG4474	Belongs to the UPF0398 family
BMWSH_3801	COG3359	exonuclease
BMWSH_3802	COG1111	helicase
BMWSH_3802	COG1205	dead DEAH box helicase
BMWSH_3804	COG3706	GGDEF domain
BMWSH_3807	COG1278	Cold shock
BMWSH_3810	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BMWSH_3813	COG0626	cystathionine gamma-synthase activity
BMWSH_3814	COG0626	cystathionine gamma-synthase activity
BMWSH_3817	COG5337	Spore coat protein CotH
BMWSH_3827	COG3331	DNA recombination
BMWSH_3828	COG4499	WXG100 protein secretion system (Wss), protein YukC
BMWSH_3828	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BMWSH_3830	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BMWSH_3831	COG3935	DnaD domain protein
BMWSH_3832	COG0017	Asparaginyl-tRNA synthetase
BMWSH_3833	COG0436	Aminotransferase
BMWSH_3837	COG1199	ATP-dependent helicase activity
BMWSH_3837	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BMWSH_3838	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
BMWSH_3839	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
BMWSH_3841	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
BMWSH_3841	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
BMWSH_3842	COG0617	tRNA 3'-terminal CCA addition
BMWSH_3843	COG0438	transferase activity, transferring glycosyl groups
BMWSH_3844	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BMWSH_3845	COG1803	Methylglyoxal synthase
BMWSH_3846	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
BMWSH_3847	COG1694	Mazg nucleotide pyrophosphohydrolase
BMWSH_3848	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BMWSH_3849	COG2738	Putative neutral zinc metallopeptidase
BMWSH_3851	COG2340	Cysteine-rich secretory protein family
BMWSH_3852	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
BMWSH_3854	COG3336	cytochrome c oxidase
BMWSH_3859	COG0109	protoheme IX farnesyltransferase activity
BMWSH_3860	COG1612	heme a metabolic process
BMWSH_3861	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
BMWSH_3862	COG0772	Belongs to the SEDS family
BMWSH_3863	COG4838	Belongs to the UPF0358 family
BMWSH_3864	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BMWSH_3865	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BMWSH_3868	COG4896	Protein conserved in bacteria
BMWSH_3873	COG0483	inositol monophosphate 1-phosphatase activity
BMWSH_3875	COG4493	Belongs to the UPF0637 family
BMWSH_3876	COG4476	Belongs to the UPF0223 family
BMWSH_3877	COG1982	Orn Lys Arg decarboxylase major
BMWSH_3879	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BMWSH_3882	COG0508	dehydrogenase complex catalyzes the overall conversion of
BMWSH_3883	COG0022	dehydrogenase e1 component
BMWSH_3887	COG0561	phosphatase activity
BMWSH_3889	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BMWSH_3890	COG0569	domain protein
BMWSH_3891	COG1132	(ABC) transporter
BMWSH_3892	COG1132	(ABC) transporter
BMWSH_3893	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
BMWSH_3894	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BMWSH_3895	COG0450	alkyl hydroperoxide reductase
BMWSH_3896	COG0668	transmembrane transport
BMWSH_3898	COG1473	amidohydrolase
BMWSH_3900	COG2171	N-acyltransferase activity
BMWSH_3901	COG0583	DNA-binding transcription factor activity
BMWSH_3902	COG0517	IMP dehydrogenase activity
BMWSH_3903	COG4703	Protein of unknown function (DUF1797)
BMWSH_3906	COG2200	EAL domain
BMWSH_3907	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_3908	COG1408	metallophosphoesterase
BMWSH_3912	COG1376	ErfK ybiS ycfS ynhG family protein
BMWSH_3915	COG0835	chemotaxis
BMWSH_3915	COG0784	Response regulator, receiver
BMWSH_3919	COG0436	Aminotransferase
BMWSH_3920	COG0778	Nitroreductase
BMWSH_3921	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_3922	COG0456	acetyltransferase
BMWSH_3924	COG0583	DNA-binding transcription factor activity
BMWSH_3926	COG1346	cytolysis
BMWSH_3929	COG2190	(PTS) system
BMWSH_3929	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMWSH_3929	COG1263	PTS System
BMWSH_3931	COG3711	transcriptional antiterminator
BMWSH_3934	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
BMWSH_3936	COG0307	riboflavin synthase, alpha
BMWSH_3937	COG3949	Membrane
BMWSH_3939	COG0646	methionine synthase
BMWSH_3939	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BMWSH_3940	COG0646	methionine synthase
BMWSH_3940	COG1410	methionine synthase
BMWSH_3949	COG3773	Cell wall hydrolase
BMWSH_3955	COG4873	Protein conserved in bacteria
BMWSH_3958	COG0702	epimerase
BMWSH_3959	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BMWSH_3961	COG0720	synthase
BMWSH_3962	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
BMWSH_3967	COG0697	spore germination
BMWSH_3968	COG0300	oxidoreductase activity
BMWSH_3974	COG0542	response to heat
BMWSH_3976	COG4191	Histidine kinase
BMWSH_3979	COG1846	Transcriptional regulator
BMWSH_3983	COG0446	pyridine nucleotide-disulphide oxidoreductase
BMWSH_3985	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
BMWSH_3986	COG1850	ribulose-bisphosphate carboxylase activity
BMWSH_3987	COG0436	Aminotransferase
BMWSH_3988	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BMWSH_3989	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
BMWSH_3990	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
BMWSH_3993	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BMWSH_3994	COG5002	protein histidine kinase activity
BMWSH_3995	COG1556	Lactate utilization protein
BMWSH_3996	COG1139	Iron-sulfur cluster binding protein
BMWSH_3997	COG0247	lactate metabolic process
BMWSH_3999	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BMWSH_4000	COG2186	Transcriptional regulator
BMWSH_4005	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BMWSH_4007	COG3243	poly(R)-hydroxyalkanoic acid synthase
BMWSH_4014	COG1191	sigma factor activity
BMWSH_4015	COG0861	Integral membrane protein TerC family
BMWSH_4016	COG2205	protein histidine kinase activity
BMWSH_4016	COG0784	Response regulator, receiver
BMWSH_4017	COG3279	Response regulator of the LytR AlgR family
BMWSH_4018	COG1785	Belongs to the alkaline phosphatase family
BMWSH_4022	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BMWSH_4022	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BMWSH_4023	COG1846	Transcriptional regulator
BMWSH_4024	COG0789	Transcriptional regulator
BMWSH_4026	COG1668	transmembrane transport
BMWSH_4027	COG4555	ABC transporter
BMWSH_4028	COG3279	Response regulator of the LytR AlgR family
BMWSH_4029	COG3279	Response regulator of the LytR AlgR family
BMWSH_4031	COG2252	PERMEase
BMWSH_4034	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BMWSH_4034	COG0456	acetyltransferase
BMWSH_4037	COG4187	Peptidase family M20/M25/M40
BMWSH_4042	COG0840	transmembrane signaling receptor activity
BMWSH_4042	COG3290	protein histidine kinase activity
BMWSH_4049	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
BMWSH_4049	COG2105	PFAM AIG2 family protein
BMWSH_4050	COG0346	lactoylglutathione lyase activity
BMWSH_4052	COG0789	Transcriptional regulator
BMWSH_4053	COG1253	flavin adenine dinucleotide binding
BMWSH_4054	COG1131	(ABC) transporter
BMWSH_4062	COG1811	Na channel or pump
BMWSH_4064	COG1263	PTS System
BMWSH_4064	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMWSH_4064	COG2190	(PTS) system
BMWSH_4065	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BMWSH_4066	COG0363	glucosamine-6-phosphate deaminase activity
BMWSH_4068	COG4821	SIS domain
BMWSH_4073	COG1404	Belongs to the peptidase S8 family
BMWSH_4075	COG0598	Magnesium transport protein CorA
BMWSH_4077	COG1316	TRANSCRIPTIONal
BMWSH_4079	COG0534	Mate efflux family protein
BMWSH_4083	COG4975	Glucose uptake
BMWSH_4084	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BMWSH_4086	COG2116	formate transmembrane transporter activity
BMWSH_4088	COG2146	nitrite reductase [NAD(P)H] activity
BMWSH_4089	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BMWSH_4098	COG2084	Dehydrogenase
BMWSH_4100	COG0069	glutamate synthase activity
BMWSH_4101	COG0028	Belongs to the TPP enzyme family
BMWSH_4103	COG4464	protein tyrosine phosphatase activity
BMWSH_4106	COG1316	TRANSCRIPTIONal
BMWSH_4107	COG0489	protein tyrosine kinase activity
BMWSH_4108	COG3944	biosynthesis protein
BMWSH_4109	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BMWSH_4110	COG1482	cell wall glycoprotein biosynthetic process
BMWSH_4111	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BMWSH_4113	COG0728	peptidoglycan biosynthetic process
BMWSH_4114	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
BMWSH_4114	COG0662	Cupin 2, conserved barrel domain protein
BMWSH_4115	COG0438	transferase activity, transferring glycosyl groups
BMWSH_4117	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BMWSH_4123	COG2801	Transposase and inactivated derivatives
BMWSH_4129	COG1396	sequence-specific DNA binding
BMWSH_4132	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BMWSH_4137	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BMWSH_4141	COG2843	Capsule synthesis protein
BMWSH_4148	COG3634	alkyl hydroperoxide reductase activity
BMWSH_4149	COG0302	gtp cyclohydrolase
BMWSH_4150	COG5001	Diguanylate cyclase
BMWSH_4150	COG3300	MHYT domain
BMWSH_4152	COG1132	(ABC) transporter
BMWSH_4155	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BMWSH_4162	COG5658	integral membrane protein
BMWSH_4163	COG0640	Transcriptional regulator
BMWSH_4166	COG0477	Major facilitator Superfamily
BMWSH_4172	COG4948	Mandelate Racemase Muconate Lactonizing
BMWSH_4174	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BMWSH_4177	COG0656	L-ascorbic acid biosynthetic process
BMWSH_4178	COG2385	sporulation resulting in formation of a cellular spore
BMWSH_4180	COG1388	LysM domain
BMWSH_4180	COG0791	NLP P60 protein
BMWSH_4183	COG0784	Response regulator, receiver
BMWSH_4184	COG0784	Response regulator, receiver
BMWSH_4185	COG4191	Histidine kinase
BMWSH_4187	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BMWSH_4189	COG0385	Bile acid
BMWSH_4192	COG1733	regulation of RNA biosynthetic process
BMWSH_4205	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BMWSH_4207	COG0154	amidase activity
BMWSH_4210	COG0667	Aldo Keto reductase
BMWSH_4212	COG0583	DNA-binding transcription factor activity
BMWSH_4213	COG2226	methyltransferase
BMWSH_4215	COG1376	ErfK ybiS ycfS ynhG family protein
BMWSH_4218	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BMWSH_4220	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMWSH_4221	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BMWSH_4222	COG2971	BadF BadG BcrA BcrD
BMWSH_4224	COG1447	Phosphotransferase system cellobiose-specific component IIA
BMWSH_4226	COG1486	melibiose metabolic process
BMWSH_4230	COG1737	Transcriptional regulator
BMWSH_4231	COG1649	PFAM Uncharacterised BCR, COG1649
BMWSH_4246	COG2076	Multidrug Resistance protein
BMWSH_4247	COG2076	Multidrug Resistance protein
BMWSH_4248	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BMWSH_4249	COG5001	Diguanylate cyclase
BMWSH_4249	COG3706	GGDEF domain
BMWSH_4249	COG4251	negative regulation of phosphorylation
BMWSH_4249	COG2203	Gaf domain
BMWSH_4254	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BMWSH_4255	COG0450	alkyl hydroperoxide reductase
BMWSH_4256	COG0673	inositol 2-dehydrogenase activity
BMWSH_4257	COG2910	NAD(P)H-binding
BMWSH_4258	COG1278	Cold shock
BMWSH_4259	COG0402	S-adenosylhomocysteine deaminase activity
BMWSH_4260	COG0531	amino acid
BMWSH_4263	COG0439	Biotin carboxylase
BMWSH_4266	COG1012	belongs to the aldehyde dehydrogenase family
BMWSH_4267	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BMWSH_4268	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BMWSH_4269	COG2271	Major facilitator Superfamily
BMWSH_4270	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BMWSH_4274	COG0628	permease
BMWSH_4275	COG0778	Nitroreductase
BMWSH_4279	COG1272	protein, Hemolysin III
BMWSH_4280	COG1914	H( )-stimulated, divalent metal cation uptake system
BMWSH_4281	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
BMWSH_4282	COG1984	allophanate hydrolase subunit 2
BMWSH_4283	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BMWSH_4285	COG2188	Transcriptional regulator
BMWSH_4286	COG0366	Alpha amylase catalytic
BMWSH_4287	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMWSH_4287	COG1263	PTS System
BMWSH_4289	COG0710	3-dehydroquinate dehydratase activity
BMWSH_4291	COG1012	belongs to the aldehyde dehydrogenase family
BMWSH_4292	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BMWSH_4294	COG2252	PERMEase
BMWSH_4295	COG0402	S-adenosylhomocysteine deaminase activity
BMWSH_4302	COG5002	protein histidine kinase activity
BMWSH_4303	COG0745	RESPONSE REGULATOR receiver
BMWSH_4307	COG0745	RESPONSE REGULATOR receiver
BMWSH_4307	COG3706	GGDEF domain
BMWSH_4313	COG1653	transport
BMWSH_4315	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BMWSH_4316	COG3584	3D domain protein
BMWSH_4316	COG3583	domain protein
BMWSH_4317	COG1879	ABC-type sugar transport system periplasmic component
BMWSH_4318	COG1172	Belongs to the binding-protein-dependent transport system permease family
BMWSH_4319	COG1129	ABC transporter
BMWSH_4321	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BMWSH_4322	COG1609	Transcriptional regulator
BMWSH_4325	COG0655	NAD(P)H dehydrogenase (quinone) activity
BMWSH_4326	COG2814	Major facilitator Superfamily
BMWSH_4327	COG1566	PFAM secretion protein HlyD family protein
BMWSH_4328	COG1846	Transcriptional regulator
BMWSH_4329	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
BMWSH_4330	COG0656	L-ascorbic acid biosynthetic process
BMWSH_4331	COG1414	Transcriptional regulator
BMWSH_4333	COG3162	membrane
BMWSH_4334	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BMWSH_4336	COG1132	(ABC) transporter
BMWSH_4337	COG1132	(ABC) transporter
BMWSH_4339	COG1733	regulation of RNA biosynthetic process
BMWSH_4340	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BMWSH_4342	COG1511	domain protein
BMWSH_4349	COG1733	regulation of RNA biosynthetic process
BMWSH_4350	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
BMWSH_4351	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
BMWSH_4353	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BMWSH_4355	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BMWSH_4356	COG1116	anion transmembrane transporter activity
BMWSH_4357	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BMWSH_4358	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BMWSH_4365	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BMWSH_4366	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BMWSH_4367	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BMWSH_4369	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BMWSH_4372	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BMWSH_4373	COG2011	ABC-type metal ion transport system permease component
BMWSH_4374	COG1464	Belongs to the NlpA lipoprotein family
BMWSH_4375	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BMWSH_4376	COG0531	amino acid
BMWSH_4380	COG1309	transcriptional regulator
BMWSH_4382	COG2113	Glycine betaine
BMWSH_4383	COG4175	Glycine betaine
BMWSH_4383	COG0517	IMP dehydrogenase activity
BMWSH_4384	COG4176	ABC-type proline glycine betaine transport system permease component
BMWSH_4385	COG2226	methyltransferase
BMWSH_4386	COG3180	Ammonia monooxygenase
BMWSH_4387	COG0583	DNA-binding transcription factor activity
BMWSH_4388	COG3181	Tripartite tricarboxylate transporter family receptor
BMWSH_4389	COG4565	transcriptional regulatory protein
BMWSH_4390	COG3290	protein histidine kinase activity
BMWSH_4391	COG2851	Citrate transporter
BMWSH_4394	COG0179	Fumarylacetoacetate (FAA) hydrolase
BMWSH_4395	COG2040	homocysteine
BMWSH_4396	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BMWSH_4399	COG1368	sulfuric ester hydrolase activity
BMWSH_4401	COG1476	TRANSCRIPTIONal
BMWSH_4409	COG3290	protein histidine kinase activity
BMWSH_4410	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BMWSH_4411	COG1301	dicarboxylic acid transport
BMWSH_4413	COG0861	Integral membrane protein TerC family
BMWSH_4416	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BMWSH_4417	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BMWSH_4419	COG0833	amino acid
BMWSH_4420	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BMWSH_4423	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BMWSH_4425	COG0577	efflux transmembrane transporter activity
BMWSH_4426	COG1136	(ABC) transporter
BMWSH_4427	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BMWSH_4430	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BMWSH_4431	COG0390	transport system, permease component
BMWSH_4435	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BMWSH_4437	COG1607	acyl-coa hydrolase
BMWSH_4440	COG0531	amino acid
BMWSH_4441	COG4297	protein containing double-stranded beta helix domain
BMWSH_4443	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BMWSH_4444	COG1115	amino acid carrier protein
BMWSH_4445	COG2066	Belongs to the glutaminase family
BMWSH_4446	COG4191	Histidine kinase
BMWSH_4447	COG0784	Response regulator, receiver
BMWSH_4448	COG3052	prosthetic group binding
BMWSH_4452	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BMWSH_4453	COG2814	Major facilitator Superfamily
BMWSH_4454	COG1733	regulation of RNA biosynthetic process
BMWSH_4456	COG4895	conserved protein (DUF2196)
BMWSH_4459	COG0028	Belongs to the TPP enzyme family
BMWSH_4460	COG3527	Alpha-acetolactate decarboxylase
BMWSH_4463	COG0028	Belongs to the TPP enzyme family
BMWSH_4463	COG4032	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BMWSH_4465	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BMWSH_4469	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BMWSH_4470	COG2223	nitrite transmembrane transporter activity
BMWSH_4471	COG0243	molybdopterin cofactor binding
BMWSH_4472	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BMWSH_4474	COG1346	cytolysis
BMWSH_4476	COG3279	Response regulator of the LytR AlgR family
BMWSH_4477	COG3275	phosphorelay sensor kinase activity
BMWSH_4478	COG1486	melibiose metabolic process
BMWSH_4479	COG1447	Phosphotransferase system cellobiose-specific component IIA
BMWSH_4480	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BMWSH_4481	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BMWSH_4482	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMWSH_4482	COG3711	transcriptional antiterminator
BMWSH_4483	COG1309	transcriptional regulator
BMWSH_4484	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BMWSH_4486	COG1113	amino acid transport
BMWSH_4488	COG3142	Participates in the control of copper homeostasis
BMWSH_4493	COG1522	sequence-specific DNA binding
BMWSH_4497	COG1953	Uracil, thiamine, allantoin
BMWSH_4498	COG1070	Carbohydrate kinase
BMWSH_4499	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
BMWSH_4500	COG1737	Transcriptional regulator
BMWSH_4502	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BMWSH_4505	COG2382	esterase
BMWSH_4507	COG2153	protein acetylation
BMWSH_4508	COG2323	membrane
BMWSH_4510	COG0210	DNA helicase
BMWSH_4521	COG0569	domain protein
BMWSH_4521	COG0475	glutathione-regulated potassium exporter activity
BMWSH_4522	COG2239	Acts as a magnesium transporter
BMWSH_4523	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BMWSH_4524	COG0564	pseudouridine synthase activity
BMWSH_4525	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BMWSH_4526	COG2357	RelA SpoT domain protein
BMWSH_4528	COG4116	CYTH
BMWSH_4529	COG0741	lytic transglycosylase activity
BMWSH_4530	COG2346	COG2346, Truncated hemoglobins
BMWSH_4533	COG1164	Oligoendopeptidase f
BMWSH_4535	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BMWSH_4537	COG0861	Integral membrane protein TerC family
BMWSH_4540	COG0583	DNA-binding transcription factor activity
BMWSH_4541	COG1393	Belongs to the ArsC family
BMWSH_4542	COG0531	amino acid
BMWSH_4543	COG1113	amino acid transport
BMWSH_4544	COG0456	acetyltransferase
BMWSH_4545	COG4608	Belongs to the ABC transporter superfamily
BMWSH_4546	COG0444	Belongs to the ABC transporter superfamily
BMWSH_4547	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BMWSH_4548	COG0601	transmembrane transport
BMWSH_4549	COG4166	transmembrane transport
BMWSH_4550	COG0180	Tryptophanyl-tRNA synthetase
BMWSH_4553	COG0601	transmembrane transport
BMWSH_4555	COG4608	Belongs to the ABC transporter superfamily
BMWSH_4556	COG0444	Belongs to the ABC transporter superfamily
BMWSH_4557	COG5504	Zn-dependent protease
BMWSH_4558	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BMWSH_4559	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BMWSH_4563	COG2267	carboxylic ester hydrolase activity
BMWSH_4565	COG2084	Dehydrogenase
BMWSH_4566	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
BMWSH_4567	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BMWSH_4570	COG0542	response to heat
BMWSH_4573	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BMWSH_4577	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BMWSH_4578	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
BMWSH_4579	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BMWSH_4580	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BMWSH_4581	COG2151	metal-sulfur cluster biosynthetic enzyme
BMWSH_4582	COG0561	phosphatase activity
BMWSH_4585	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BMWSH_4586	COG1307	EDD domain protein, DegV family
BMWSH_4588	COG2996	Protein conserved in bacteria
BMWSH_4589	COG1666	GTP binding
BMWSH_4590	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_4591	COG3829	transcription factor binding
BMWSH_4592	COG0833	amino acid
BMWSH_4593	COG0833	amino acid
BMWSH_4594	COG4187	Peptidase family M20/M25/M40
BMWSH_4595	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BMWSH_4596	COG1012	belongs to the aldehyde dehydrogenase family
BMWSH_4597	COG1609	Transcriptional regulator
BMWSH_4598	COG1874	Beta-galactosidase
BMWSH_4598	COG0366	Alpha amylase catalytic
BMWSH_4600	COG0004	ammonium transporteR
BMWSH_4601	COG0347	Belongs to the P(II) protein family
BMWSH_4604	COG0367	asparagine synthase
BMWSH_4607	COG2311	Membrane
BMWSH_4614	COG1403	HNH endonuclease
BMWSH_4615	COG0419	ATPase involved in DNA repair
BMWSH_4616	COG0420	3'-5' exonuclease activity
BMWSH_4617	COG1074	ATP-dependent DNA helicase activity
BMWSH_4618	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
BMWSH_4619	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_4620	COG0398	Pfam SNARE associated Golgi protein
BMWSH_4621	COG1506	peptidase
BMWSH_4621	COG4946	Tricorn protease homolog
BMWSH_4621	COG0823	Involved in the tonB-independent uptake of proteins
BMWSH_4623	COG2224	Isocitrate lyase
BMWSH_4624	COG0501	Belongs to the peptidase M48B family
BMWSH_4625	COG0501	Belongs to the peptidase M48B family
BMWSH_4627	COG1024	Enoyl-CoA hydratase
BMWSH_4628	COG0318	PFAM AMP-dependent synthetase and ligase
BMWSH_4629	COG0095	Lipoate-protein ligase
BMWSH_4630	COG1234	tRNA 3'-trailer cleavage
BMWSH_4632	COG2972	Histidine kinase
BMWSH_4635	COG1309	transcriptional regulator
BMWSH_4638	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
BMWSH_4639	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BMWSH_4640	COG2329	Antibiotic biosynthesis monooxygenase
BMWSH_4641	COG3069	C4-dicarboxylate transmembrane transporter activity
BMWSH_4642	COG0671	phosphoesterase, PA-phosphatase related
BMWSH_4643	COG1473	amidohydrolase
BMWSH_4645	COG4473	ABC transporter
BMWSH_4646	COG1131	(ABC) transporter
BMWSH_4647	COG0537	adenosine 5'-monophosphoramidase activity
BMWSH_4648	COG2755	lipolytic protein G-D-S-L family
BMWSH_4648	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BMWSH_4649	COG2153	protein acetylation
BMWSH_4650	COG1695	Transcriptional regulator
BMWSH_4651	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BMWSH_4654	COG1846	Transcriptional regulator
BMWSH_4657	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BMWSH_4659	COG3481	metal-dependent phosphohydrolase, HD sub domain
BMWSH_4660	COG1668	transmembrane transport
BMWSH_4661	COG4152	abc transporter atp-binding protein
BMWSH_4664	COG1024	Enoyl-CoA hydratase
BMWSH_4665	COG0318	PFAM AMP-dependent synthetase and ligase
BMWSH_4666	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BMWSH_4667	COG0561	phosphatase activity
BMWSH_4668	COG3679	Belongs to the UPF0342 family
BMWSH_4670	COG0189	ligase activity
BMWSH_4672	COG2508	Transcriptional regulator
BMWSH_4673	COG3842	ATPase activity
BMWSH_4676	COG1253	flavin adenine dinucleotide binding
BMWSH_4677	COG0702	epimerase
BMWSH_4680	COG0351	phosphomethylpyrimidine kinase
BMWSH_4681	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BMWSH_4684	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BMWSH_4685	COG0352	thiamine-phosphate diphosphorylase activity
BMWSH_4687	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BMWSH_4688	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BMWSH_4689	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BMWSH_4691	COG0604	alcohol dehydrogenase
BMWSH_4692	COG1959	2 iron, 2 sulfur cluster binding
BMWSH_4694	COG2719	SpoVR family
BMWSH_4697	COG1268	BioY protein
BMWSH_4698	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BMWSH_4699	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BMWSH_4701	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BMWSH_4702	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
BMWSH_4704	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BMWSH_4704	COG3153	acetyltransferase
BMWSH_4705	COG1376	ErfK ybiS ycfS ynhG family protein
BMWSH_4706	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BMWSH_4707	COG0673	inositol 2-dehydrogenase activity
BMWSH_4709	COG0564	pseudouridine synthase activity
BMWSH_4710	COG0840	transmembrane signaling receptor activity
BMWSH_4711	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BMWSH_4713	COG1620	l-lactate permease
BMWSH_4714	COG0604	alcohol dehydrogenase
BMWSH_4718	COG0628	permease
BMWSH_4720	COG2962	Rard protein
BMWSH_4722	COG0084	hydrolase, TatD family'
BMWSH_4725	COG2851	Citrate transporter
BMWSH_4727	COG0747	negative chemotaxis
BMWSH_4728	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BMWSH_4729	COG1942	4-Oxalocrotonate Tautomerase
BMWSH_4733	COG1187	pseudouridine synthase activity
BMWSH_4734	COG2814	Major facilitator Superfamily
BMWSH_4741	COG1522	sequence-specific DNA binding
BMWSH_4742	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BMWSH_4746	COG1609	Transcriptional regulator
BMWSH_4752	COG0673	inositol 2-dehydrogenase activity
BMWSH_4754	COG2814	Major facilitator Superfamily
BMWSH_4755	COG1609	Transcriptional regulator
BMWSH_4761	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BMWSH_4762	COG0456	acetyltransferase
BMWSH_4762	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMWSH_4764	COG3103	Sh3 type 3 domain protein
BMWSH_4766	COG1876	peptidase activity
BMWSH_4767	COG3583	domain protein
BMWSH_4767	COG3584	3D domain protein
BMWSH_4768	COG1388	LysM domain
BMWSH_4768	COG3942	CHAP domain
BMWSH_4776	COG4948	Mandelate Racemase Muconate Lactonizing
BMWSH_4779	COG0584	glycerophosphoryl diester phosphodiesterase
BMWSH_4782	COG1175	transmembrane transport
BMWSH_4784	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
BMWSH_4788	COG0531	amino acid
BMWSH_4790	COG2217	Heavy metal translocating P-type atpase
BMWSH_4791	COG0586	Pfam SNARE associated Golgi protein
BMWSH_4793	COG1301	dicarboxylic acid transport
BMWSH_4794	COG1968	undecaprenyl-diphosphatase activity
BMWSH_4796	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
BMWSH_4799	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BMWSH_4802	COG2766	serine protein kinase
BMWSH_4804	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BMWSH_4807	COG3382	B3 4 domain protein
BMWSH_4810	COG0735	belongs to the Fur family
BMWSH_4811	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BMWSH_4815	COG4555	ABC transporter
BMWSH_4816	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BMWSH_4817	COG4129	membrane
BMWSH_4818	COG1132	(ABC) transporter
BMWSH_4819	COG3557	Belongs to the UPF0374 family
BMWSH_4822	COG1028	Short-chain dehydrogenase reductase Sdr
BMWSH_4824	COG1194	a g-specific adenine glycosylase
BMWSH_4825	COG1988	membrane-bound metal-dependent
BMWSH_4829	COG4221	oxidoreductase activity
BMWSH_4831	COG1090	epimerase
BMWSH_4835	COG5002	protein histidine kinase activity
BMWSH_4837	COG1113	amino acid transport
BMWSH_4838	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BMWSH_4843	COG0535	radical SAM domain protein
BMWSH_4845	COG0387	Pfam Sodium calcium exchanger
BMWSH_4846	COG3871	stress protein (general stress protein 26)
BMWSH_4848	COG3479	Phenolic acid decarboxylase
BMWSH_4850	COG0477	Major facilitator Superfamily
BMWSH_4852	COG0640	Transcriptional regulator
BMWSH_4854	COG2217	Heavy metal translocating P-type atpase
BMWSH_4856	COG1295	ribonuclease BN
BMWSH_4857	COG4980	gas vesicle protein
BMWSH_4858	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BMWSH_4859	COG4840	Belongs to the UPF0435 family
BMWSH_4860	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
BMWSH_4862	COG2340	Cysteine-rich secretory protein family
BMWSH_4863	COG0693	protein deglycase activity
BMWSH_4864	COG3486	L-lysine 6-monooxygenase (NADPH) activity
BMWSH_4865	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BMWSH_4865	COG1017	nitric oxide dioxygenase activity
BMWSH_4866	COG1959	2 iron, 2 sulfur cluster binding
BMWSH_4868	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
BMWSH_4870	COG0488	(ABC) transporter
BMWSH_4873	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BMWSH_4875	COG2356	endonuclease I
BMWSH_4878	COG1511	domain protein
BMWSH_4879	COG1674	ftsk spoiiie
BMWSH_4879	COG0433	COG0433 Predicted ATPase
BMWSH_4880	COG4499	WXG100 protein secretion system (Wss), protein YukC
BMWSH_4881	COG5417	Belongs to the EsaB family
BMWSH_4882	COG4842	Belongs to the WXG100 family
BMWSH_4886	COG0513	Belongs to the DEAD box helicase family
BMWSH_4887	COG4191	Histidine kinase
BMWSH_4890	COG4565	transcriptional regulatory protein
BMWSH_4891	COG3290	protein histidine kinase activity
BMWSH_4892	COG0598	Magnesium transport protein CorA
BMWSH_4893	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
BMWSH_4896	COG1115	amino acid carrier protein
BMWSH_4898	COG2318	DinB family
BMWSH_4900	COG0693	protein deglycase activity
BMWSH_4901	COG2259	Doxx family
BMWSH_4903	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
BMWSH_4905	COG1764	response to oxidative stress
BMWSH_4906	COG0671	phosphoesterase, PA-phosphatase related
BMWSH_4909	COG2311	Membrane
BMWSH_4910	COG0745	RESPONSE REGULATOR receiver
BMWSH_4911	COG2205	protein histidine kinase activity
BMWSH_4912	COG0745	RESPONSE REGULATOR receiver
BMWSH_4913	COG5002	protein histidine kinase activity
BMWSH_4913	COG3850	Histidine kinase
BMWSH_4914	COG3212	peptidase
BMWSH_4915	COG3212	peptidase
BMWSH_4916	COG2733	membrane
BMWSH_4917	COG1113	amino acid transport
BMWSH_4918	COG0765	amino acid transport
BMWSH_4919	COG0765	amino acid transport
BMWSH_4921	COG1876	peptidase activity
BMWSH_4923	COG2814	Major facilitator Superfamily
BMWSH_4924	COG4978	Transcriptional regulator
BMWSH_4924	COG0789	Transcriptional regulator
BMWSH_4926	COG2706	6-phosphogluconolactonase activity
BMWSH_4927	COG0024	Methionine aminopeptidase
BMWSH_4928	COG3852	Histidine kinase
BMWSH_4929	COG1744	ABC transporter substrate-binding protein PnrA-like
BMWSH_4931	COG0166	Belongs to the GPI family
BMWSH_4933	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BMWSH_4936	COG1597	lipid kinase activity
BMWSH_4938	COG0154	amidase activity
BMWSH_4939	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BMWSH_4942	COG4851	CamS sex pheromone cAM373 precursor
BMWSH_4944	COG0210	DNA helicase
BMWSH_4946	COG0423	glycine-tRNA ligase activity
BMWSH_4947	COG4496	protein, YerC YecD
BMWSH_4948	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
BMWSH_4949	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BMWSH_4950	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
BMWSH_4951	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BMWSH_4952	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BMWSH_4953	COG0047	phosphoribosylformylglycinamidine synthase activity
BMWSH_4954	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BMWSH_4955	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BMWSH_4956	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BMWSH_4957	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BMWSH_4958	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BMWSH_4962	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BMWSH_4963	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BMWSH_4964	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BMWSH_4965	COG0590	tRNA wobble adenosine to inosine editing
BMWSH_4966	COG1335	isochorismatase
BMWSH_4967	COG1388	LysM domain
BMWSH_4967	COG3858	chitin binding
BMWSH_4968	COG1428	Deoxynucleoside kinase
BMWSH_4969	COG1428	Deoxynucleoside kinase
BMWSH_4971	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
BMWSH_4974	COG0517	IMP dehydrogenase activity
BMWSH_4974	COG0516	GMP reductase activity
BMWSH_4976	COG2252	PERMEase
BMWSH_4977	COG0519	Catalyzes the synthesis of GMP from XMP
BMWSH_4977	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BMWSH_4978	COG1305	Transglutaminase-like
BMWSH_4979	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
BMWSH_4980	COG0714	Associated with various cellular activities
BMWSH_4981	COG0459	protein refolding
BMWSH_4982	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BMWSH_4983	COG1266	CAAX protease self-immunity
BMWSH_4985	COG0805	protein transport
BMWSH_4986	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BMWSH_4987	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
BMWSH_4988	COG0488	(ABC) transporter
BMWSH_4990	COG0456	acetyltransferase
BMWSH_4991	COG1214	PFAM Peptidase M22, glycoprotease
BMWSH_4992	COG0802	atpase or kinase
BMWSH_4995	COG2183	response to ionizing radiation
BMWSH_4996	COG2208	phosphoserine phosphatase activity
BMWSH_4997	COG1191	sigma factor activity
BMWSH_5000	COG2208	phosphoserine phosphatase activity
BMWSH_5001	COG2172	sigma factor antagonist activity
BMWSH_5002	COG1366	Belongs to the anti-sigma-factor antagonist family
BMWSH_5003	COG1366	Belongs to the anti-sigma-factor antagonist family
BMWSH_5004	COG2337	Toxic component of a toxin-antitoxin (TA) module
BMWSH_5005	COG0864	Transcriptional regulator
BMWSH_5006	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BMWSH_5007	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BMWSH_5008	COG0736	holo-[acyl-carrier-protein] synthase activity
BMWSH_5009	COG0705	Rhomboid family
BMWSH_5010	COG4294	response to UV
BMWSH_5011	COG0513	Belongs to the DEAD box helicase family
BMWSH_5012	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BMWSH_5013	COG1181	Belongs to the D-alanine--D-alanine ligase family
BMWSH_5015	COG3976	FMN-binding domain protein
BMWSH_5015	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
BMWSH_5018	COG5002	protein histidine kinase activity
BMWSH_5020	COG0745	RESPONSE REGULATOR receiver
BMWSH_5021	COG1177	transmembrane transport
BMWSH_5022	COG1176	ABC-type spermidine putrescine transport system, permease component I
BMWSH_5025	COG1368	sulfuric ester hydrolase activity
BMWSH_5026	COG1970	mechanosensitive ion channel activity
BMWSH_5027	COG1376	ErfK ybiS ycfS ynhG family protein
BMWSH_5029	COG0246	Mannitol dehydrogenase
BMWSH_5030	COG3711	transcriptional antiterminator
BMWSH_5031	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMWSH_5031	COG2213	PTS system mannitol-specific
BMWSH_5033	COG1388	LysM domain
BMWSH_5033	COG0791	NLP P60 protein
BMWSH_5033	COG3103	Sh3 type 3 domain protein
BMWSH_5036	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BMWSH_5037	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BMWSH_5038	COG5662	AntiSigma factor
BMWSH_5039	COG1595	DNA-templated transcription, initiation
BMWSH_5043	COG0726	polysaccharide deacetylase
BMWSH_5044	COG2194	sulfuric ester hydrolase activity
BMWSH_5046	COG0583	DNA-binding transcription factor activity
BMWSH_5047	COG0489	protein tyrosine kinase activity
BMWSH_5048	COG0860	N-Acetylmuramoyl-L-alanine amidase
BMWSH_5064	COG0582	viral genome integration into host DNA
BMWSH_5066	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BMWSH_5067	COG0101	tRNA pseudouridine synthase activity
BMWSH_5068	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BMWSH_5069	COG1122	ATPase activity
BMWSH_5070	COG1122	ATPase activity
BMWSH_5071	COG0203	ribosomal protein L17
BMWSH_5072	COG0202	RNA polymerase activity
BMWSH_5074	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BMWSH_5075	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BMWSH_5076	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BMWSH_5077	COG0024	Methionine aminopeptidase
BMWSH_5078	COG0563	adenylate kinase activity
BMWSH_5079	COG0201	protein transport
BMWSH_5081	COG1841	ribosomal large subunit assembly
BMWSH_5082	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BMWSH_5086	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BMWSH_5089	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BMWSH_5090	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BMWSH_5091	COG0255	Belongs to the universal ribosomal protein uL29 family
BMWSH_5092	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BMWSH_5093	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BMWSH_5094	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BMWSH_5095	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BMWSH_5096	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BMWSH_5097	COG0089	rRNA binding
BMWSH_5098	COG0088	Forms part of the polypeptide exit tunnel
BMWSH_5099	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BMWSH_5100	COG0051	transcription antitermination factor activity, RNA binding
BMWSH_5101	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BMWSH_5103	COG0049	tRNA binding
BMWSH_5104	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BMWSH_5105	COG1358	cellular component organization or biogenesis
BMWSH_5107	COG0085	RNA polymerase activity
BMWSH_5108	COG2813	Specifically methylates the guanine in position
BMWSH_5110	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BMWSH_5111	COG0081	regulation of translation
BMWSH_5113	COG0250	Participates in transcription elongation, termination and antitermination
BMWSH_5114	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BMWSH_5116	COG3688	RNA-binding protein containing a PIN domain
BMWSH_5117	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BMWSH_5119	COG0215	cysteine-tRNA ligase activity
BMWSH_5120	COG1045	serine acetyltransferase
BMWSH_5121	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BMWSH_5123	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BMWSH_5124	COG4956	integral membrane protein (PIN domain superfamily)
BMWSH_5125	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
BMWSH_5126	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BMWSH_5127	COG0542	response to heat
BMWSH_5128	COG3869	Catalyzes the specific phosphorylation of arginine residues in
BMWSH_5129	COG3880	PFAM UvrB UvrC protein
BMWSH_5131	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BMWSH_5132	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BMWSH_5133	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BMWSH_5134	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BMWSH_5135	COG0512	Glutamine amidotransferase of anthranilate synthase
BMWSH_5136	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BMWSH_5137	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BMWSH_5138	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BMWSH_5139	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
BMWSH_5140	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BMWSH_5142	COG0037	tRNA processing
BMWSH_5143	COG0515	serine threonine protein kinase
BMWSH_5144	COG2304	oxidoreductase activity
BMWSH_5146	COG1098	S1 RNA binding domain
BMWSH_5147	COG1098	S1 RNA binding domain
BMWSH_5148	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
BMWSH_5152	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BMWSH_5153	COG3956	TIGRFAM MazG family protein
BMWSH_5154	COG2244	polysaccharide biosynthetic process
BMWSH_5155	COG2002	toxin-antitoxin pair type II binding
BMWSH_5156	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BMWSH_5158	COG0193	aminoacyl-tRNA hydrolase activity
BMWSH_5159	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
BMWSH_5160	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BMWSH_5161	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BMWSH_5162	COG2088	sporulation resulting in formation of a cellular spore
BMWSH_5163	COG0251	oxidation-reduction process
BMWSH_5164	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BMWSH_5168	COG4466	Protein conserved in bacteria
BMWSH_5171	COG0084	hydrolase, TatD family'
BMWSH_5173	COG2827	Endonuclease containing a URI domain
BMWSH_5174	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
BMWSH_5175	COG4467	Involved in initiation control of chromosome replication
BMWSH_5176	COG1774	PSP1 C-terminal conserved region
BMWSH_5177	COG0470	DNA polymerase III
BMWSH_5178	COG3870	Protein conserved in bacteria
BMWSH_5179	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BMWSH_5180	COG1982	Orn Lys Arg decarboxylase major
BMWSH_5181	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BMWSH_5182	COG0187	DNA topoisomerase II activity
BMWSH_5183	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BMWSH_5184	COG2501	S4 domain
BMWSH_5185	COG0592	DNA-directed DNA polymerase activity
BMWSH_5186	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BMWSH_p10019	COG4974	Belongs to the 'phage' integrase family
BMWSH_p10035	COG0438	transferase activity, transferring glycosyl groups
BMWSH_p10044	COG1216	Glycosyl transferase, family 2
BMWSH_p10047	COG1216	Glycosyl transferase, family 2
BMWSH_p10051	COG1216	Glycosyl transferase, family 2
BMWSH_p10058	COG1086	Polysaccharide biosynthesis protein
BMWSH_p10069	COG0277	FAD linked oxidase domain protein
BMWSH_p201	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BMWSH_p207	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BMWSH_p209	COG1695	Transcriptional regulator