BMWSH_0004 SM00393 Putative single-stranded nucleic acids-binding domain BMWSH_0004 SM01245 BMWSH_0004 BMWSH_0006 SM01228 BMWSH_0006 BMWSH_0008 SM00470 ParB-like nuclease domain BMWSH_0010 SM00470 ParB-like nuclease domain BMWSH_0020 SM00267 diguanylate cyclase BMWSH_0023 SM00788 Adenylosuccinate synthetase BMWSH_0024 SM00448 cheY-homologous receiver domain BMWSH_0024 SM00862 Transcriptional regulatory protein, C terminal BMWSH_0025 SM00091 PAS domain BMWSH_0025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_0025 SM00387 Histidine kinase-like ATPases BMWSH_0025 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_0028 SM00849 Metallo-beta-lactamase superfamily BMWSH_0029 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMWSH_0034 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BMWSH_0036 SM00642 Alpha-amylase domain BMWSH_0039 SM01060 BMWSH_0039 BMWSH_0045 SM00354 helix_turn _helix lactose operon repressor BMWSH_0050 SM00382 ATPases associated with a variety of cellular activities BMWSH_0051 SM00382 ATPases associated with a variety of cellular activities BMWSH_0066 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BMWSH_0066 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BMWSH_0068 SM01350 BMWSH_0068 BMWSH_0071 SM00986 Uracil DNA glycosylase superfamily BMWSH_0071 SM00987 UreE urease accessory protein, C-terminal domain BMWSH_0083 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMWSH_0092 SM00836 DALR anticodon binding domain BMWSH_0092 SM01016 Arginyl tRNA synthetase N terminal dom BMWSH_0094 SM00155 Phospholipase D. Active site motifs. BMWSH_0105 SM00448 cheY-homologous receiver domain BMWSH_0109 SM00357 Cold shock protein domain BMWSH_0109 SM00382 ATPases associated with a variety of cellular activities BMWSH_0109 SM00959 Rho termination factor, N-terminal domain BMWSH_0112 SM00937 BMWSH_0112 BMWSH_0130 SM00382 ATPases associated with a variety of cellular activities BMWSH_0142 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_0145 SM00257 Lysin motif BMWSH_0146 SM00487 DEAD-like helicases superfamily BMWSH_0146 SM00490 helicase superfamily c-terminal domain BMWSH_0149 SM00984 UDP binding domain BMWSH_0151 SM00244 prohibitin homologues BMWSH_0156 SM00387 Histidine kinase-like ATPases BMWSH_0157 SM00421 helix_turn_helix, Lux Regulon BMWSH_0157 SM00448 cheY-homologous receiver domain BMWSH_0161 SM00487 DEAD-like helicases superfamily BMWSH_0161 SM00490 helicase superfamily c-terminal domain BMWSH_0180 SM00957 SecA DEAD-like domain BMWSH_0180 SM00958 SecA preprotein cross-linking domain BMWSH_0181 SM00937 BMWSH_0181 BMWSH_0188 SM00382 ATPases associated with a variety of cellular activities BMWSH_0191 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMWSH_0191 SM00245 tail specific protease BMWSH_0192 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMWSH_0195 SM00091 PAS domain BMWSH_0195 SM00382 ATPases associated with a variety of cellular activities BMWSH_0196 SM00490 helicase superfamily c-terminal domain BMWSH_0197 SM00382 ATPases associated with a variety of cellular activities BMWSH_0212 SM00028 Tetratricopeptide repeats BMWSH_0224 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BMWSH_0228 SM01192 BMWSH_0228 BMWSH_0228 SM01193 BMWSH_0228 BMWSH_0231 SM00316 Ribosomal protein S1-like RNA-binding domain BMWSH_0231 SM00357 Cold shock protein domain BMWSH_0231 SM00955 BMWSH_0231 BMWSH_0236 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BMWSH_0236 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BMWSH_0239 SM00729 Elongator protein 3, MiaB family, Radical SAM BMWSH_0242 SM00852 Probable molybdopterin binding domain BMWSH_0244 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_0245 SM00014 Acid phosphatase homologues BMWSH_0247 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_0247 SM00387 Histidine kinase-like ATPases BMWSH_0247 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_0262 SM00382 ATPases associated with a variety of cellular activities BMWSH_0273 SM00493 BMWSH_0273 BMWSH_0275 SM00382 ATPases associated with a variety of cellular activities BMWSH_0275 SM00930 BMWSH_0275 BMWSH_0279 SM00382 ATPases associated with a variety of cellular activities BMWSH_0290 SM00729 Elongator protein 3, MiaB family, Radical SAM BMWSH_0318 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMWSH_0321 SM00479 BMWSH_0321 BMWSH_0322 SM01298 BMWSH_0322 BMWSH_0327 SM00344 helix_turn_helix ASNC type BMWSH_0329 SM00316 Ribosomal protein S1-like RNA-binding domain BMWSH_0349 SM00642 Alpha-amylase domain BMWSH_0359 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BMWSH_0371 SM00833 Cobalamin synthesis protein cobW C-terminal domain BMWSH_0372 SM00947 Carbonic anhydrase BMWSH_0373 SM01234 BMWSH_0373 BMWSH_0380 SM00382 ATPases associated with a variety of cellular activities BMWSH_0388 SM00014 Acid phosphatase homologues BMWSH_0393 SM00729 Elongator protein 3, MiaB family, Radical SAM BMWSH_0400 SM00450 Rhodanese Homology Domain BMWSH_0404 SM00363 S4 RNA-binding domain BMWSH_0405 SM00420 helix_turn_helix, Deoxyribose operon repressor BMWSH_0410 SM00642 Alpha-amylase domain BMWSH_0414 SM00849 Metallo-beta-lactamase superfamily BMWSH_0421 SM00382 ATPases associated with a variety of cellular activities BMWSH_0421 SM00843 BMWSH_0421 BMWSH_0428 SM00830 Chorismate mutase type II BMWSH_0430 SM00354 helix_turn _helix lactose operon repressor BMWSH_0434 SM00116 Domain in cystathionine beta-synthase and other proteins. BMWSH_0437 SM00363 S4 RNA-binding domain BMWSH_0438 SM00363 S4 RNA-binding domain BMWSH_0438 SM01390 BMWSH_0438 BMWSH_0440 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BMWSH_0446 SM00981 BMWSH_0446 BMWSH_0462 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BMWSH_0462 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BMWSH_0463 SM00849 Metallo-beta-lactamase superfamily BMWSH_0466 SM00116 Domain in cystathionine beta-synthase and other proteins. BMWSH_0472 SM00919 Malic enzyme, NAD binding domain BMWSH_0472 SM01274 BMWSH_0472 BMWSH_0473 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_0482 SM01329 BMWSH_0482 BMWSH_0485 SM00448 cheY-homologous receiver domain BMWSH_0485 SM00862 Transcriptional regulatory protein, C terminal BMWSH_0486 SM00091 PAS domain BMWSH_0486 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_0486 SM00387 Histidine kinase-like ATPases BMWSH_0486 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_0487 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BMWSH_0487 SM00474 3'-5' exonuclease BMWSH_0487 SM00475 5'-3' exonuclease BMWSH_0487 SM00482 DNA polymerase A domain BMWSH_0488 SM01232 BMWSH_0488 BMWSH_0491 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BMWSH_0498 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BMWSH_0507 SM00967 RNA 2'-O ribose methyltransferase substrate binding BMWSH_0509 SM00873 B3/4 domain BMWSH_0509 SM00874 tRNA synthetase B5 domain BMWSH_0509 SM00896 Ferredoxin-fold anticodon binding domain BMWSH_0513 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BMWSH_0513 SM00481 DNA polymerase alpha chain like domain BMWSH_0513 SM00483 DNA polymerase X family BMWSH_0514 SM00463 Small MutS-related domain BMWSH_0514 SM00534 ATPase domain of DNA mismatch repair MUTS family BMWSH_0520 SM00893 Electron transfer flavoprotein domain BMWSH_0521 SM00893 Electron transfer flavoprotein domain BMWSH_0523 SM00465 GIY-YIG type nucleases (URI domain) BMWSH_0531 SM00421 helix_turn_helix, Lux Regulon BMWSH_0535 SM00382 ATPases associated with a variety of cellular activities BMWSH_0536 SM00062 Bacterial periplasmic substrate-binding proteins BMWSH_0545 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_0547 SM00909 Sporulation and spore germination BMWSH_0554 SM00917 LeuA allosteric (dimerisation) domain BMWSH_0555 SM01329 BMWSH_0555 BMWSH_0560 SM00382 ATPases associated with a variety of cellular activities BMWSH_0560 SM00994 ClpX C4-type zinc finger BMWSH_0560 SM01086 C-terminal, D2-small domain, of ClpB protein BMWSH_0561 SM00382 ATPases associated with a variety of cellular activities BMWSH_0562 SM00382 ATPases associated with a variety of cellular activities BMWSH_0562 SM00464 Found in ATP-dependent protease La (LON) BMWSH_0569 SM01004 Delta-aminolevulinic acid dehydratase BMWSH_0571 SM00257 Lysin motif BMWSH_0589 SM00316 Ribosomal protein S1-like RNA-binding domain BMWSH_0593 SM01317 BMWSH_0593 BMWSH_0600 SM00257 Lysin motif BMWSH_0605 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BMWSH_0607 SM01323 BMWSH_0607 BMWSH_0615 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMWSH_0615 SM00954 Region found in RelA / SpoT proteins BMWSH_0617 SM00287 Bacterial SH3 domain homologues BMWSH_0617 SM00646 BMWSH_0617 BMWSH_0625 SM00382 ATPases associated with a variety of cellular activities BMWSH_0629 SM00028 Tetratricopeptide repeats BMWSH_0630 SM00382 ATPases associated with a variety of cellular activities BMWSH_0635 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BMWSH_0637 SM00732 Likely ribonuclease with RNase H fold. BMWSH_0643 SM00382 ATPases associated with a variety of cellular activities BMWSH_0659 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMWSH_0663 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BMWSH_0665 SM00849 Metallo-beta-lactamase superfamily BMWSH_0671 SM00838 Elongation factor G C-terminus BMWSH_0672 SM00729 Elongator protein 3, MiaB family, Radical SAM BMWSH_0676 SM00271 DnaJ molecular chaperone homology domain BMWSH_0679 SM00729 Elongator protein 3, MiaB family, Radical SAM BMWSH_0683 SM00244 prohibitin homologues BMWSH_0687 SM00322 K homology RNA-binding domain BMWSH_0688 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMWSH_0695 SM00116 Domain in cystathionine beta-synthase and other proteins. BMWSH_0698 SM00400 zinc finger BMWSH_0698 SM00493 BMWSH_0698 BMWSH_0706 SM00487 DEAD-like helicases superfamily BMWSH_0706 SM00490 helicase superfamily c-terminal domain BMWSH_0707 SM00518 AP endonuclease family 2 BMWSH_0709 SM00382 ATPases associated with a variety of cellular activities BMWSH_0723 SM00382 ATPases associated with a variety of cellular activities BMWSH_0732 SM00028 Tetratricopeptide repeats BMWSH_0738 SM00849 Metallo-beta-lactamase superfamily BMWSH_0742 SM00382 ATPases associated with a variety of cellular activities BMWSH_0751 SM00487 DEAD-like helicases superfamily BMWSH_0751 SM00490 helicase superfamily c-terminal domain BMWSH_0753 SM00450 Rhodanese Homology Domain BMWSH_0758 SM00529 Helix-turn-helix diphteria tox regulatory element BMWSH_0764 SM00382 ATPases associated with a variety of cellular activities BMWSH_0774 SM00878 Biotin carboxylase C-terminal domain BMWSH_0780 SM00861 Transketolase, pyrimidine binding domain BMWSH_0781 SM00363 S4 RNA-binding domain BMWSH_0784 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMWSH_0785 SM00448 cheY-homologous receiver domain BMWSH_0791 SM00091 PAS domain BMWSH_0791 SM00382 ATPases associated with a variety of cellular activities BMWSH_0793 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BMWSH_0797 SM00861 Transketolase, pyrimidine binding domain BMWSH_0804 SM00062 Bacterial periplasmic substrate-binding proteins BMWSH_0804 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BMWSH_0819 SM00849 Metallo-beta-lactamase superfamily BMWSH_0821 SM00704 CDGSH-type zinc finger. Function unknown. BMWSH_0826 SM00882 Coenzyme A transferase BMWSH_0827 SM00882 Coenzyme A transferase BMWSH_0838 SM00936 Penicillin-binding protein 5, C-terminal domain BMWSH_0840 SM00387 Histidine kinase-like ATPases BMWSH_0863 SM00448 cheY-homologous receiver domain BMWSH_0863 SM00862 Transcriptional regulatory protein, C terminal BMWSH_0864 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_0864 SM00387 Histidine kinase-like ATPases BMWSH_0864 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_0865 SM00257 Lysin motif BMWSH_0871 SM00487 DEAD-like helicases superfamily BMWSH_0871 SM00490 helicase superfamily c-terminal domain BMWSH_0876 SM00422 helix_turn_helix, mercury resistance BMWSH_0878 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BMWSH_0880 SM00870 BMWSH_0880 BMWSH_0887 SM00563 Phosphate acyltransferases BMWSH_0888 SM00316 Ribosomal protein S1-like RNA-binding domain BMWSH_0889 SM01240 BMWSH_0889 BMWSH_0899 SM00411 bacterial (prokaryotic) histone like domain BMWSH_0905 SM00562 BMWSH_0905 BMWSH_0906 SM00138 Methyltransferase, chemotaxis proteins BMWSH_0916 SM00028 Tetratricopeptide repeats BMWSH_0917 SM00914 BMWSH_0917 BMWSH_0932 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMWSH_0939 SM00878 Biotin carboxylase C-terminal domain BMWSH_0945 SM00740 BMWSH_0945 BMWSH_0946 SM00740 BMWSH_0946 BMWSH_0954 SM00842 Cell division protein FtsA BMWSH_0955 SM00864 Tubulin/FtsZ family, GTPase domain BMWSH_0955 SM00865 Tubulin/FtsZ family, C-terminal domain BMWSH_0964 SM00363 S4 RNA-binding domain BMWSH_0969 SM00363 S4 RNA-binding domain BMWSH_0975 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BMWSH_0976 SM00851 MGS-like domain BMWSH_0976 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BMWSH_0976 SM01209 BMWSH_0976 BMWSH_0979 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BMWSH_0982 SM00831 Cation transporter/ATPase, N-terminus BMWSH_0985 SM00072 Guanylate kinase homologues. BMWSH_0986 SM01409 BMWSH_0986 BMWSH_0988 SM00487 DEAD-like helicases superfamily BMWSH_0988 SM00490 helicase superfamily c-terminal domain BMWSH_0991 SM00331 Sigma factor PP2C-like phosphatases BMWSH_0991 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BMWSH_0992 SM00220 Serine/Threonine protein kinases, catalytic domain BMWSH_0992 SM00740 BMWSH_0992 BMWSH_0996 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BMWSH_0999 SM01120 BMWSH_0999 BMWSH_0999 SM01121 BMWSH_0999 BMWSH_1003 SM00487 DEAD-like helicases superfamily BMWSH_1003 SM00490 helicase superfamily c-terminal domain BMWSH_1005 SM00822 BMWSH_1005 BMWSH_1007 SM00358 Double-stranded RNA binding motif BMWSH_1007 SM00535 Ribonuclease III family BMWSH_1008 SM00968 SMC proteins Flexible Hinge Domain BMWSH_1009 SM00382 ATPases associated with a variety of cellular activities BMWSH_1009 SM00962 SRP54-type protein, GTPase domain BMWSH_1009 SM00963 SRP54-type protein, helical bundle domain BMWSH_1011 SM00382 ATPases associated with a variety of cellular activities BMWSH_1011 SM00962 SRP54-type protein, GTPase domain BMWSH_1011 SM00963 SRP54-type protein, helical bundle domain BMWSH_1022 SM00881 CoA binding domain BMWSH_1024 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BMWSH_1024 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BMWSH_1024 SM00493 BMWSH_1024 BMWSH_1028 SM00382 ATPases associated with a variety of cellular activities BMWSH_1028 SM01086 C-terminal, D2-small domain, of ClpB protein BMWSH_1037 SM00382 ATPases associated with a variety of cellular activities BMWSH_1047 SM00448 cheY-homologous receiver domain BMWSH_1054 SM00382 ATPases associated with a variety of cellular activities BMWSH_1054 SM00962 SRP54-type protein, GTPase domain BMWSH_1056 SM00448 cheY-homologous receiver domain BMWSH_1057 SM00073 Histidine Phosphotransfer domain BMWSH_1057 SM00260 Two component signalling adaptor domain BMWSH_1057 SM00387 Histidine kinase-like ATPases BMWSH_1057 SM01231 BMWSH_1057 BMWSH_1058 SM00260 Two component signalling adaptor domain BMWSH_1069 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMWSH_1071 SM00479 BMWSH_1071 BMWSH_1071 SM00481 DNA polymerase alpha chain like domain BMWSH_1073 SM00316 Ribosomal protein S1-like RNA-binding domain BMWSH_1073 SM00322 K homology RNA-binding domain BMWSH_1080 SM00904 Riboflavin kinase BMWSH_1081 SM01387 BMWSH_1081 BMWSH_1082 SM00316 Ribosomal protein S1-like RNA-binding domain BMWSH_1082 SM00322 K homology RNA-binding domain BMWSH_1088 SM00859 Semialdehyde dehydrogenase, NAD binding domain BMWSH_1090 SM01130 BMWSH_1090 BMWSH_1091 SM00849 Metallo-beta-lactamase superfamily BMWSH_1094 SM00382 ATPases associated with a variety of cellular activities BMWSH_1094 SM00843 BMWSH_1094 BMWSH_1095 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_1095 SM00866 BMWSH_1095 BMWSH_1097 SM00382 ATPases associated with a variety of cellular activities BMWSH_1103 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_1106 SM00852 Probable molybdopterin binding domain BMWSH_1107 SM00382 ATPases associated with a variety of cellular activities BMWSH_1108 SM00322 K homology RNA-binding domain BMWSH_1108 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMWSH_1116 SM00729 Elongator protein 3, MiaB family, Radical SAM BMWSH_1120 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BMWSH_1120 SM00534 ATPase domain of DNA mismatch repair MUTS family BMWSH_1121 SM00853 MutL C terminal dimerisation domain BMWSH_1121 SM01340 BMWSH_1121 BMWSH_1124 SM00382 ATPases associated with a variety of cellular activities BMWSH_1128 SM00422 helix_turn_helix, mercury resistance BMWSH_1129 SM01230 BMWSH_1129 BMWSH_1131 SM00257 Lysin motif BMWSH_1131 SM00646 BMWSH_1131 BMWSH_1142 SM00857 Resolvase, N terminal domain BMWSH_1144 SM00861 Transketolase, pyrimidine binding domain BMWSH_1147 SM00382 ATPases associated with a variety of cellular activities BMWSH_1148 SM00382 ATPases associated with a variety of cellular activities BMWSH_1156 SM00091 PAS domain BMWSH_1156 SM00382 ATPases associated with a variety of cellular activities BMWSH_1160 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMWSH_1160 SM00091 PAS domain BMWSH_1160 SM00387 Histidine kinase-like ATPases BMWSH_1160 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_1171 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_1171 SM00387 Histidine kinase-like ATPases BMWSH_1171 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_1178 SM00091 PAS domain BMWSH_1178 SM00387 Histidine kinase-like ATPases BMWSH_1178 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_1182 SM00882 Coenzyme A transferase BMWSH_1194 SM00219 Tyrosine kinase, catalytic domain BMWSH_1197 SM00014 Acid phosphatase homologues BMWSH_1208 SM01061 CAT RNA binding domain BMWSH_1214 SM00382 ATPases associated with a variety of cellular activities BMWSH_1221 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_1222 SM00382 ATPases associated with a variety of cellular activities BMWSH_1240 SM00116 Domain in cystathionine beta-synthase and other proteins. BMWSH_1240 SM01091 Transporter associated domain BMWSH_1241 SM00257 Lysin motif BMWSH_1249 SM00849 Metallo-beta-lactamase superfamily BMWSH_1264 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_1286 SM01060 BMWSH_1286 BMWSH_1291 SM00387 Histidine kinase-like ATPases BMWSH_1291 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_1292 SM00354 helix_turn _helix lactose operon repressor BMWSH_1299 SM00382 ATPases associated with a variety of cellular activities BMWSH_1311 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_1311 SM00895 BMWSH_1311 BMWSH_1314 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_1314 SM00387 Histidine kinase-like ATPases BMWSH_1314 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_1315 SM00448 cheY-homologous receiver domain BMWSH_1315 SM00862 Transcriptional regulatory protein, C terminal BMWSH_1316 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMWSH_1318 SM00344 helix_turn_helix ASNC type BMWSH_1335 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_1336 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMWSH_1352 SM00448 cheY-homologous receiver domain BMWSH_1352 SM00862 Transcriptional regulatory protein, C terminal BMWSH_1353 SM00387 Histidine kinase-like ATPases BMWSH_1353 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_1355 SM00382 ATPases associated with a variety of cellular activities BMWSH_1363 SM00640 Glycosyl hydrolases family 32 BMWSH_1367 SM00422 helix_turn_helix, mercury resistance BMWSH_1370 SM00422 helix_turn_helix, mercury resistance BMWSH_1386 SM00966 SpoVT / AbrB like domain BMWSH_1393 SM00052 Putative diguanylate phosphodiesterase BMWSH_1393 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMWSH_1393 SM00267 diguanylate cyclase BMWSH_1407 SM00855 Phosphoglycerate mutase family BMWSH_1408 SM00357 Cold shock protein domain BMWSH_1412 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_1431 SM00382 ATPases associated with a variety of cellular activities BMWSH_1435 SM00852 Probable molybdopterin binding domain BMWSH_1437 SM00852 Probable molybdopterin binding domain BMWSH_1444 SM00871 Bacterial transcription activator, effector binding domain BMWSH_1446 SM00342 helix_turn_helix, arabinose operon control protein BMWSH_1446 SM00871 Bacterial transcription activator, effector binding domain BMWSH_1449 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_1452 SM00248 ankyrin repeats BMWSH_1469 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_1472 SM01266 BMWSH_1472 BMWSH_1486 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BMWSH_1486 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BMWSH_1489 SM00870 BMWSH_1489 BMWSH_1532 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_1545 SM00382 ATPases associated with a variety of cellular activities BMWSH_1548 SM00448 cheY-homologous receiver domain BMWSH_1549 SM00862 Transcriptional regulatory protein, C terminal BMWSH_1550 SM00387 Histidine kinase-like ATPases BMWSH_1550 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_1559 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_1559 SM00866 BMWSH_1559 BMWSH_1562 SM00833 Cobalamin synthesis protein cobW C-terminal domain BMWSH_1564 SM00833 Cobalamin synthesis protein cobW C-terminal domain BMWSH_1569 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_1579 SM00382 ATPases associated with a variety of cellular activities BMWSH_1587 SM00091 PAS domain BMWSH_1587 SM00382 ATPases associated with a variety of cellular activities BMWSH_1595 SM00829 Enoylreductase BMWSH_1599 SM00357 Cold shock protein domain BMWSH_1610 SM00028 Tetratricopeptide repeats BMWSH_1625 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_1631 SM00899 BMWSH_1631 BMWSH_1634 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMWSH_1635 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_1637 SM01007 Class II Aldolase and Adducin N-terminal domain BMWSH_1647 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_1653 SM00460 Transglutaminase/protease-like homologues BMWSH_1661 SM00420 helix_turn_helix, Deoxyribose operon repressor BMWSH_1661 SM01134 BMWSH_1661 BMWSH_1667 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_1667 SM00895 BMWSH_1667 BMWSH_1674 SM00382 ATPases associated with a variety of cellular activities BMWSH_1677 SM00062 Bacterial periplasmic substrate-binding proteins BMWSH_1678 SM00062 Bacterial periplasmic substrate-binding proteins BMWSH_1679 SM01007 Class II Aldolase and Adducin N-terminal domain BMWSH_1680 SM00062 Bacterial periplasmic substrate-binding proteins BMWSH_1687 SM00631 BMWSH_1687 BMWSH_1700 SM00287 Bacterial SH3 domain homologues BMWSH_1701 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMWSH_1701 SM00091 PAS domain BMWSH_1701 SM00267 diguanylate cyclase BMWSH_1702 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMWSH_1704 SM00357 Cold shock protein domain BMWSH_1713 SM00422 helix_turn_helix, mercury resistance BMWSH_1714 SM00829 Enoylreductase BMWSH_1723 SM00382 ATPases associated with a variety of cellular activities BMWSH_1726 SM00448 cheY-homologous receiver domain BMWSH_1726 SM00862 Transcriptional regulatory protein, C terminal BMWSH_1727 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_1727 SM00387 Histidine kinase-like ATPases BMWSH_1727 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_1749 SM00382 ATPases associated with a variety of cellular activities BMWSH_1760 SM01001 AIR carboxylase BMWSH_1768 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_1777 SM00357 Cold shock protein domain BMWSH_1779 SM00357 Cold shock protein domain BMWSH_1829 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_1831 SM00894 Excalibur calcium-binding domain BMWSH_1836 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_1836 SM00866 BMWSH_1836 BMWSH_1850 SM00450 Rhodanese Homology Domain BMWSH_1858 SM00382 ATPases associated with a variety of cellular activities BMWSH_1859 SM00387 Histidine kinase-like ATPases BMWSH_1860 SM00448 cheY-homologous receiver domain BMWSH_1860 SM00862 Transcriptional regulatory protein, C terminal BMWSH_1886 SM00382 ATPases associated with a variety of cellular activities BMWSH_1901 SM00422 helix_turn_helix, mercury resistance BMWSH_1907 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BMWSH_1907 SM00387 Histidine kinase-like ATPases BMWSH_1907 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_1911 SM00448 cheY-homologous receiver domain BMWSH_1911 SM00862 Transcriptional regulatory protein, C terminal BMWSH_1912 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_1912 SM00387 Histidine kinase-like ATPases BMWSH_1912 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_1914 SM00382 ATPases associated with a variety of cellular activities BMWSH_1919 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BMWSH_1923 SM00861 Transketolase, pyrimidine binding domain BMWSH_1924 SM01350 BMWSH_1924 BMWSH_1935 SM00421 helix_turn_helix, Lux Regulon BMWSH_1935 SM00448 cheY-homologous receiver domain BMWSH_1937 SM00342 helix_turn_helix, arabinose operon control protein BMWSH_1961 SM00729 Elongator protein 3, MiaB family, Radical SAM BMWSH_1964 SM00354 helix_turn _helix lactose operon repressor BMWSH_1966 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_1969 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BMWSH_1969 SM00534 ATPase domain of DNA mismatch repair MUTS family BMWSH_1982 SM00257 Lysin motif BMWSH_1994 SM00357 Cold shock protein domain BMWSH_2016 SM00871 Bacterial transcription activator, effector binding domain BMWSH_2019 SM00829 Enoylreductase BMWSH_2033 SM00257 Lysin motif BMWSH_2039 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMWSH_2074 SM00422 helix_turn_helix, mercury resistance BMWSH_2075 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_2086 SM00919 Malic enzyme, NAD binding domain BMWSH_2086 SM01274 BMWSH_2086 BMWSH_2096 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMWSH_2100 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_2101 SM00870 BMWSH_2101 BMWSH_2104 SM00422 helix_turn_helix, mercury resistance BMWSH_2116 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMWSH_2116 SM00091 PAS domain BMWSH_2124 SM00046 Diacylglycerol kinase catalytic domain (presumed) BMWSH_2133 SM00240 Forkhead associated domain BMWSH_2133 SM00862 Transcriptional regulatory protein, C terminal BMWSH_2137 SM00966 SpoVT / AbrB like domain BMWSH_2139 SM00287 Bacterial SH3 domain homologues BMWSH_2139 SM00646 BMWSH_2139 BMWSH_2147 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMWSH_2156 SM00116 Domain in cystathionine beta-synthase and other proteins. BMWSH_2169 SM01060 BMWSH_2169 BMWSH_2179 SM00830 Chorismate mutase type II BMWSH_2187 SM00116 Domain in cystathionine beta-synthase and other proteins. BMWSH_2190 SM01091 Transporter associated domain BMWSH_2202 SM00382 ATPases associated with a variety of cellular activities BMWSH_2206 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_2216 SM00257 Lysin motif BMWSH_2217 SM00257 Lysin motif BMWSH_2223 SM00988 UreE urease accessory protein, N-terminal domain BMWSH_2244 SM00382 ATPases associated with a variety of cellular activities BMWSH_2251 SM01324 BMWSH_2251 BMWSH_2261 SM00938 Nitrogen regulatory protein P-II BMWSH_2268 SM00871 Bacterial transcription activator, effector binding domain BMWSH_2278 SM00861 Transketolase, pyrimidine binding domain BMWSH_2283 SM00387 Histidine kinase-like ATPases BMWSH_2283 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_2305 SM00382 ATPases associated with a variety of cellular activities BMWSH_2318 SM00346 helix_turn_helix isocitrate lyase regulation BMWSH_2331 SM00487 DEAD-like helicases superfamily BMWSH_2331 SM00491 BMWSH_2331 BMWSH_2348 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BMWSH_2349 SM00318 Staphylococcal nuclease homologues BMWSH_2359 SM00382 ATPases associated with a variety of cellular activities BMWSH_2360 SM00382 ATPases associated with a variety of cellular activities BMWSH_2366 SM01091 Transporter associated domain BMWSH_2371 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_2371 SM00895 BMWSH_2371 BMWSH_2372 SM00829 Enoylreductase BMWSH_2386 SM00052 Putative diguanylate phosphodiesterase BMWSH_2388 SM00854 Bacterial capsule synthesis protein PGA_cap BMWSH_2402 SM00849 Metallo-beta-lactamase superfamily BMWSH_2406 SM01207 BMWSH_2406 BMWSH_2409 SM00641 Glycosyl hydrolases family 25 BMWSH_2411 SM00487 DEAD-like helicases superfamily BMWSH_2411 SM00490 helicase superfamily c-terminal domain BMWSH_2414 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BMWSH_2415 SM01133 BMWSH_2415 BMWSH_2424 SM00062 Bacterial periplasmic substrate-binding proteins BMWSH_2443 SM00354 helix_turn _helix lactose operon repressor BMWSH_2448 SM00382 ATPases associated with a variety of cellular activities BMWSH_2464 SM00860 SMI1 / KNR4 family BMWSH_2465 SM00860 SMI1 / KNR4 family BMWSH_2485 SM00835 Cupin BMWSH_2488 SM00257 Lysin motif BMWSH_2491 SM00850 LytTr DNA-binding domain BMWSH_2493 SM00829 Enoylreductase BMWSH_2500 SM00357 Cold shock protein domain BMWSH_2502 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_2503 SM00357 Cold shock protein domain BMWSH_2506 SM00382 ATPases associated with a variety of cellular activities BMWSH_2517 SM00420 helix_turn_helix, Deoxyribose operon repressor BMWSH_2517 SM01134 BMWSH_2517 BMWSH_2522 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_2530 SM00248 ankyrin repeats BMWSH_2538 SM00248 ankyrin repeats BMWSH_2542 SM00028 Tetratricopeptide repeats BMWSH_2543 SM00248 ankyrin repeats BMWSH_2547 SM00382 ATPases associated with a variety of cellular activities BMWSH_2561 SM00421 helix_turn_helix, Lux Regulon BMWSH_2561 SM00448 cheY-homologous receiver domain BMWSH_2563 SM00382 ATPases associated with a variety of cellular activities BMWSH_2568 SM00914 BMWSH_2568 BMWSH_2583 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BMWSH_2586 SM00919 Malic enzyme, NAD binding domain BMWSH_2586 SM01274 BMWSH_2586 BMWSH_2592 SM00914 BMWSH_2592 BMWSH_2606 SM00860 SMI1 / KNR4 family BMWSH_2608 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_2608 SM00387 Histidine kinase-like ATPases BMWSH_2608 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_2609 SM00448 cheY-homologous receiver domain BMWSH_2609 SM00862 Transcriptional regulatory protein, C terminal BMWSH_2611 SM00947 Carbonic anhydrase BMWSH_2613 SM00422 helix_turn_helix, mercury resistance BMWSH_2628 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_2644 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BMWSH_2658 SM01207 BMWSH_2658 BMWSH_2659 SM00881 CoA binding domain BMWSH_2660 SM00387 Histidine kinase-like ATPases BMWSH_2660 SM00433 TopoisomeraseII BMWSH_2661 SM00434 DNA Topoisomerase IV BMWSH_2679 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_2690 SM00563 Phosphate acyltransferases BMWSH_2696 SM01131 BMWSH_2696 BMWSH_2700 SM00773 Proposed nucleic acid binding domain BMWSH_2702 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_2705 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BMWSH_2706 SM00421 helix_turn_helix, Lux Regulon BMWSH_2706 SM00448 cheY-homologous receiver domain BMWSH_2709 SM00487 DEAD-like helicases superfamily BMWSH_2709 SM00490 helicase superfamily c-terminal domain BMWSH_2720 SM00642 Alpha-amylase domain BMWSH_2724 SM00797 Allophanate hydrolase subunit 2 BMWSH_2726 SM00878 Biotin carboxylase C-terminal domain BMWSH_2727 SM00346 helix_turn_helix isocitrate lyase regulation BMWSH_2735 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMWSH_2735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_2735 SM00319 Homologues of the ligand binding domain of Tar BMWSH_2743 SM00838 Elongation factor G C-terminus BMWSH_2743 SM00889 Elongation factor G, domain IV BMWSH_2758 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_2774 SM00871 Bacterial transcription activator, effector binding domain BMWSH_2778 SM00382 ATPases associated with a variety of cellular activities BMWSH_2782 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BMWSH_2784 SM00849 Metallo-beta-lactamase superfamily BMWSH_2785 SM00155 Phospholipase D. Active site motifs. BMWSH_2789 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_2793 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMWSH_2807 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_2822 SM00450 Rhodanese Homology Domain BMWSH_2826 SM00849 Metallo-beta-lactamase superfamily BMWSH_2827 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMWSH_2833 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_2864 SM00882 Coenzyme A transferase BMWSH_2865 SM00882 Coenzyme A transferase BMWSH_2869 SM00829 Enoylreductase BMWSH_2883 SM00091 PAS domain BMWSH_2883 SM00387 Histidine kinase-like ATPases BMWSH_2883 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_2903 SM00448 cheY-homologous receiver domain BMWSH_2904 SM00387 Histidine kinase-like ATPases BMWSH_2917 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMWSH_2917 SM00091 PAS domain BMWSH_2917 SM00387 Histidine kinase-like ATPases BMWSH_2917 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_2919 SM00641 Glycosyl hydrolases family 25 BMWSH_2925 SM00479 BMWSH_2925 BMWSH_2937 SM00028 Tetratricopeptide repeats BMWSH_2951 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BMWSH_2953 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMWSH_2953 SM00138 Methyltransferase, chemotaxis proteins BMWSH_2953 SM00387 Histidine kinase-like ATPases BMWSH_2953 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_2956 SM00382 ATPases associated with a variety of cellular activities BMWSH_2957 SM00257 Lysin motif BMWSH_2960 SM00849 Metallo-beta-lactamase superfamily BMWSH_2963 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_2969 SM00382 ATPases associated with a variety of cellular activities BMWSH_2970 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_2975 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BMWSH_2978 SM00490 helicase superfamily c-terminal domain BMWSH_2983 SM00091 PAS domain BMWSH_2983 SM00382 ATPases associated with a variety of cellular activities BMWSH_2984 SM00341 Helicase and RNase D C-terminal BMWSH_2984 SM00487 DEAD-like helicases superfamily BMWSH_2984 SM00490 helicase superfamily c-terminal domain BMWSH_2984 SM00956 BMWSH_2984 BMWSH_3009 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BMWSH_3009 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BMWSH_3009 SM00493 BMWSH_3009 BMWSH_3015 SM00354 helix_turn _helix lactose operon repressor BMWSH_3019 SM00382 ATPases associated with a variety of cellular activities BMWSH_3025 SM00382 ATPases associated with a variety of cellular activities BMWSH_3027 SM00342 helix_turn_helix, arabinose operon control protein BMWSH_3034 SM00316 Ribosomal protein S1-like RNA-binding domain BMWSH_3042 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_3052 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_3054 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_3054 SM00387 Histidine kinase-like ATPases BMWSH_3054 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_3055 SM00448 cheY-homologous receiver domain BMWSH_3055 SM00862 Transcriptional regulatory protein, C terminal BMWSH_3071 SM00382 ATPases associated with a variety of cellular activities BMWSH_3074 SM00342 helix_turn_helix, arabinose operon control protein BMWSH_3075 SM01038 Beta galactosidase small chain BMWSH_3078 SM00327 von Willebrand factor (vWF) type A domain BMWSH_3079 SM00382 ATPases associated with a variety of cellular activities BMWSH_3084 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_3101 SM00354 helix_turn _helix lactose operon repressor BMWSH_3102 SM00257 Lysin motif BMWSH_3109 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMWSH_3112 SM00422 helix_turn_helix, mercury resistance BMWSH_3120 SM00420 helix_turn_helix, Deoxyribose operon repressor BMWSH_3120 SM01134 BMWSH_3120 BMWSH_3127 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_3127 SM00387 Histidine kinase-like ATPases BMWSH_3127 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_3128 SM00448 cheY-homologous receiver domain BMWSH_3128 SM00862 Transcriptional regulatory protein, C terminal BMWSH_3130 SM00382 ATPases associated with a variety of cellular activities BMWSH_3137 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_3137 SM00387 Histidine kinase-like ATPases BMWSH_3137 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_3138 SM00448 cheY-homologous receiver domain BMWSH_3138 SM00862 Transcriptional regulatory protein, C terminal BMWSH_3149 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_3153 SM00155 Phospholipase D. Active site motifs. BMWSH_3170 SM00422 helix_turn_helix, mercury resistance BMWSH_3181 SM00919 Malic enzyme, NAD binding domain BMWSH_3181 SM01274 BMWSH_3181 BMWSH_3195 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_3195 SM00866 BMWSH_3195 BMWSH_3196 SM00644 BMWSH_3196 BMWSH_3199 SM00646 BMWSH_3199 BMWSH_3202 SM00904 Riboflavin kinase BMWSH_3203 SM00382 ATPases associated with a variety of cellular activities BMWSH_3206 SM00062 Bacterial periplasmic substrate-binding proteins BMWSH_3214 SM00919 Malic enzyme, NAD binding domain BMWSH_3214 SM01274 BMWSH_3214 BMWSH_3218 SM00387 Histidine kinase-like ATPases BMWSH_3218 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_3219 SM00448 cheY-homologous receiver domain BMWSH_3219 SM00862 Transcriptional regulatory protein, C terminal BMWSH_3226 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_3239 SM00642 Alpha-amylase domain BMWSH_3243 SM00387 Histidine kinase-like ATPases BMWSH_3243 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_3261 SM00966 SpoVT / AbrB like domain BMWSH_3271 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BMWSH_3271 SM00475 5'-3' exonuclease BMWSH_3273 SM00465 GIY-YIG type nucleases (URI domain) BMWSH_3275 SM00833 Cobalamin synthesis protein cobW C-terminal domain BMWSH_3277 SM00422 helix_turn_helix, mercury resistance BMWSH_3281 SM00855 Phosphoglycerate mutase family BMWSH_3293 SM00567 E-Z type HEAT repeats BMWSH_3293 SM00932 Scaffold protein Nfu/NifU N terminal BMWSH_3294 SM00382 ATPases associated with a variety of cellular activities BMWSH_3295 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMWSH_3310 SM00450 Rhodanese Homology Domain BMWSH_3318 SM00028 Tetratricopeptide repeats BMWSH_3318 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_3323 SM01329 BMWSH_3323 BMWSH_3330 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BMWSH_3330 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BMWSH_3330 SM00493 BMWSH_3330 BMWSH_3332 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMWSH_3346 SM00448 cheY-homologous receiver domain BMWSH_3346 SM00862 Transcriptional regulatory protein, C terminal BMWSH_3347 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_3347 SM00387 Histidine kinase-like ATPases BMWSH_3347 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_3350 SM00914 BMWSH_3350 BMWSH_3356 SM00710 Parallel beta-helix repeats BMWSH_3357 SM00858 BMWSH_3357 BMWSH_3359 SM00354 helix_turn _helix lactose operon repressor BMWSH_3374 SM00382 ATPases associated with a variety of cellular activities BMWSH_3394 SM00116 Domain in cystathionine beta-synthase and other proteins. BMWSH_3398 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains BMWSH_3410 SM00382 ATPases associated with a variety of cellular activities BMWSH_3411 SM00382 ATPases associated with a variety of cellular activities BMWSH_3426 SM00860 SMI1 / KNR4 family BMWSH_3444 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BMWSH_3449 SM00422 helix_turn_helix, mercury resistance BMWSH_3462 SM00382 ATPases associated with a variety of cellular activities BMWSH_3463 SM01120 BMWSH_3463 BMWSH_3466 SM00342 helix_turn_helix, arabinose operon control protein BMWSH_3472 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMWSH_3474 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMWSH_3476 SM00226 Low molecular weight phosphatase family BMWSH_3483 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_3488 SM00257 Lysin motif BMWSH_3488 SM00636 BMWSH_3488 BMWSH_3490 SM00387 Histidine kinase-like ATPases BMWSH_3501 SM00357 Cold shock protein domain BMWSH_3519 SM00344 helix_turn_helix ASNC type BMWSH_3526 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_3526 SM00866 BMWSH_3526 BMWSH_3545 SM00342 helix_turn_helix, arabinose operon control protein BMWSH_3545 SM00871 Bacterial transcription activator, effector binding domain BMWSH_3594 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMWSH_3596 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_3605 SM00382 ATPases associated with a variety of cellular activities BMWSH_3626 SM00930 BMWSH_3626 BMWSH_3629 SM00382 ATPases associated with a variety of cellular activities BMWSH_3629 SM00930 BMWSH_3629 BMWSH_3632 SM00062 Bacterial periplasmic substrate-binding proteins BMWSH_3635 SM00640 Glycosyl hydrolases family 32 BMWSH_3638 SM00382 ATPases associated with a variety of cellular activities BMWSH_3642 SM00640 Glycosyl hydrolases family 32 BMWSH_3644 SM00354 helix_turn _helix lactose operon repressor BMWSH_3658 SM00849 Metallo-beta-lactamase superfamily BMWSH_3673 SM00640 Glycosyl hydrolases family 32 BMWSH_3678 SM00100 Cyclic nucleotide-monophosphate binding domain BMWSH_3681 SM00331 Sigma factor PP2C-like phosphatases BMWSH_3681 SM00448 cheY-homologous receiver domain BMWSH_3682 SM00138 Methyltransferase, chemotaxis proteins BMWSH_3683 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BMWSH_3683 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_3683 SM00387 Histidine kinase-like ATPases BMWSH_3683 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_3683 SM00448 cheY-homologous receiver domain BMWSH_3691 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BMWSH_3700 SM00382 ATPases associated with a variety of cellular activities BMWSH_3706 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_3709 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_3721 SM00257 Lysin motif BMWSH_3721 SM00636 BMWSH_3721 BMWSH_3724 SM00155 Phospholipase D. Active site motifs. BMWSH_3729 SM00421 helix_turn_helix, Lux Regulon BMWSH_3729 SM00448 cheY-homologous receiver domain BMWSH_3734 SM00382 ATPases associated with a variety of cellular activities BMWSH_3741 SM00052 Putative diguanylate phosphodiesterase BMWSH_3741 SM00091 PAS domain BMWSH_3741 SM00267 diguanylate cyclase BMWSH_3745 SM00382 ATPases associated with a variety of cellular activities BMWSH_3749 SM00382 ATPases associated with a variety of cellular activities BMWSH_3754 SM00028 Tetratricopeptide repeats BMWSH_3759 SM00357 Cold shock protein domain BMWSH_3783 SM00491 BMWSH_3783 BMWSH_3785 SM00382 ATPases associated with a variety of cellular activities BMWSH_3791 SM00981 BMWSH_3791 BMWSH_3792 SM00642 Alpha-amylase domain BMWSH_3793 SM00421 helix_turn_helix, Lux Regulon BMWSH_3793 SM00448 cheY-homologous receiver domain BMWSH_3794 SM00387 Histidine kinase-like ATPases BMWSH_3802 SM00487 DEAD-like helicases superfamily BMWSH_3802 SM00490 helicase superfamily c-terminal domain BMWSH_3804 SM00267 diguanylate cyclase BMWSH_3807 SM00357 Cold shock protein domain BMWSH_3830 SM00478 endonuclease III BMWSH_3830 SM00525 BMWSH_3830 BMWSH_3837 SM00479 BMWSH_3837 BMWSH_3837 SM00487 DEAD-like helicases superfamily BMWSH_3837 SM00491 BMWSH_3837 BMWSH_3845 SM00851 MGS-like domain BMWSH_3852 SM00116 Domain in cystathionine beta-synthase and other proteins. BMWSH_3861 SM00878 Biotin carboxylase C-terminal domain BMWSH_3865 SM00670 Large family of predicted nucleotide-binding domains BMWSH_3871 SM00838 Elongation factor G C-terminus BMWSH_3883 SM00861 Transketolase, pyrimidine binding domain BMWSH_3889 SM00849 Metallo-beta-lactamase superfamily BMWSH_3891 SM00382 ATPases associated with a variety of cellular activities BMWSH_3892 SM00382 ATPases associated with a variety of cellular activities BMWSH_3893 SM01350 BMWSH_3893 BMWSH_3906 SM00052 Putative diguanylate phosphodiesterase BMWSH_3912 SM00257 Lysin motif BMWSH_3915 SM00260 Two component signalling adaptor domain BMWSH_3915 SM00448 cheY-homologous receiver domain BMWSH_3918 SM00914 BMWSH_3918 BMWSH_3940 SM01018 B12 binding domain BMWSH_3968 SM00822 BMWSH_3968 BMWSH_3974 SM00382 ATPases associated with a variety of cellular activities BMWSH_3974 SM01086 C-terminal, D2-small domain, of ClpB protein BMWSH_3976 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMWSH_3976 SM00091 PAS domain BMWSH_3976 SM00387 Histidine kinase-like ATPases BMWSH_3976 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_3979 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_3994 SM00091 PAS domain BMWSH_3994 SM00387 Histidine kinase-like ATPases BMWSH_3994 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_4000 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_4000 SM00895 BMWSH_4000 BMWSH_4001 SM00729 Elongator protein 3, MiaB family, Radical SAM BMWSH_4008 SM00822 BMWSH_4008 BMWSH_4016 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMWSH_4016 SM00091 PAS domain BMWSH_4016 SM00387 Histidine kinase-like ATPases BMWSH_4016 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_4016 SM00448 cheY-homologous receiver domain BMWSH_4017 SM00448 cheY-homologous receiver domain BMWSH_4017 SM00850 LytTr DNA-binding domain BMWSH_4018 SM00098 Alkaline phosphatase homologues BMWSH_4023 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_4027 SM00382 ATPases associated with a variety of cellular activities BMWSH_4029 SM00850 LytTr DNA-binding domain BMWSH_4030 SM00387 Histidine kinase-like ATPases BMWSH_4042 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMWSH_4042 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_4052 SM00422 helix_turn_helix, mercury resistance BMWSH_4053 SM01091 Transporter associated domain BMWSH_4054 SM00382 ATPases associated with a variety of cellular activities BMWSH_4067 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_4067 SM00866 BMWSH_4067 BMWSH_4078 SM00835 Cupin BMWSH_4080 SM00465 GIY-YIG type nucleases (URI domain) BMWSH_4099 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_4099 SM00895 BMWSH_4099 BMWSH_4111 SM00984 UDP binding domain BMWSH_4129 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_4141 SM00854 Bacterial capsule synthesis protein PGA_cap BMWSH_4145 SM00052 Putative diguanylate phosphodiesterase BMWSH_4146 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMWSH_4146 SM00091 PAS domain BMWSH_4150 SM00052 Putative diguanylate phosphodiesterase BMWSH_4150 SM00267 diguanylate cyclase BMWSH_4150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_4151 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_4152 SM00382 ATPases associated with a variety of cellular activities BMWSH_4163 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMWSH_4164 SM01321 BMWSH_4164 BMWSH_4169 SM00382 ATPases associated with a variety of cellular activities BMWSH_4172 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BMWSH_4175 SM00914 BMWSH_4175 BMWSH_4179 SM00646 BMWSH_4179 BMWSH_4184 SM00448 cheY-homologous receiver domain BMWSH_4185 SM00387 Histidine kinase-like ATPases BMWSH_4193 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMWSH_4193 SM00091 PAS domain BMWSH_4193 SM00267 diguanylate cyclase BMWSH_4194 SM00052 Putative diguanylate phosphodiesterase BMWSH_4241 SM00854 Bacterial capsule synthesis protein PGA_cap BMWSH_4249 SM00267 diguanylate cyclase BMWSH_4258 SM00357 Cold shock protein domain BMWSH_4263 SM00796 Allophanate hydrolase subunit 1 BMWSH_4263 SM00797 Allophanate hydrolase subunit 2 BMWSH_4263 SM00878 Biotin carboxylase C-terminal domain BMWSH_4272 SM00829 Enoylreductase BMWSH_4282 SM00797 Allophanate hydrolase subunit 2 BMWSH_4283 SM00796 Allophanate hydrolase subunit 1 BMWSH_4285 SM00866 BMWSH_4285 BMWSH_4286 SM00642 Alpha-amylase domain BMWSH_4299 SM00855 Phosphoglycerate mutase family BMWSH_4302 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BMWSH_4302 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_4302 SM00387 Histidine kinase-like ATPases BMWSH_4302 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_4302 SM00448 cheY-homologous receiver domain BMWSH_4303 SM00448 cheY-homologous receiver domain BMWSH_4307 SM00267 diguanylate cyclase BMWSH_4307 SM00448 cheY-homologous receiver domain BMWSH_4315 SM00903 Flavin reductase like domain BMWSH_4319 SM00382 ATPases associated with a variety of cellular activities BMWSH_4322 SM00354 helix_turn _helix lactose operon repressor BMWSH_4323 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_4328 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_4331 SM00346 helix_turn_helix isocitrate lyase regulation BMWSH_4336 SM00382 ATPases associated with a variety of cellular activities BMWSH_4337 SM00382 ATPases associated with a variety of cellular activities BMWSH_4338 SM00829 Enoylreductase BMWSH_4339 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMWSH_4344 SM00899 BMWSH_4344 BMWSH_4350 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BMWSH_4356 SM00382 ATPases associated with a variety of cellular activities BMWSH_4363 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BMWSH_4363 SM01232 BMWSH_4363 BMWSH_4372 SM00382 ATPases associated with a variety of cellular activities BMWSH_4372 SM00930 BMWSH_4372 BMWSH_4383 SM00116 Domain in cystathionine beta-synthase and other proteins. BMWSH_4383 SM00382 ATPases associated with a variety of cellular activities BMWSH_4389 SM00448 cheY-homologous receiver domain BMWSH_4390 SM00091 PAS domain BMWSH_4390 SM00387 Histidine kinase-like ATPases BMWSH_4396 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMWSH_4401 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_4408 SM00448 cheY-homologous receiver domain BMWSH_4409 SM00091 PAS domain BMWSH_4409 SM00387 Histidine kinase-like ATPases BMWSH_4426 SM00382 ATPases associated with a variety of cellular activities BMWSH_4430 SM00382 ATPases associated with a variety of cellular activities BMWSH_4446 SM00387 Histidine kinase-like ATPases BMWSH_4447 SM00448 cheY-homologous receiver domain BMWSH_4451 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BMWSH_4471 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BMWSH_4476 SM00448 cheY-homologous receiver domain BMWSH_4476 SM00850 LytTr DNA-binding domain BMWSH_4477 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BMWSH_4477 SM00387 Histidine kinase-like ATPases BMWSH_4484 SM00849 Metallo-beta-lactamase superfamily BMWSH_4489 SM00487 DEAD-like helicases superfamily BMWSH_4489 SM00490 helicase superfamily c-terminal domain BMWSH_4493 SM00344 helix_turn_helix ASNC type BMWSH_4499 SM01350 BMWSH_4499 BMWSH_4522 SM00116 Domain in cystathionine beta-synthase and other proteins. BMWSH_4522 SM00924 MgtE intracellular N domain BMWSH_4526 SM00954 Region found in RelA / SpoT proteins BMWSH_4528 SM01118 BMWSH_4528 BMWSH_4535 SM00155 Phospholipase D. Active site motifs. BMWSH_4545 SM00382 ATPases associated with a variety of cellular activities BMWSH_4546 SM00382 ATPases associated with a variety of cellular activities BMWSH_4555 SM00382 ATPases associated with a variety of cellular activities BMWSH_4556 SM00382 ATPases associated with a variety of cellular activities BMWSH_4558 SM00825 Beta-ketoacyl synthase BMWSH_4568 SM00342 helix_turn_helix, arabinose operon control protein BMWSH_4570 SM00382 ATPases associated with a variety of cellular activities BMWSH_4570 SM01086 C-terminal, D2-small domain, of ClpB protein BMWSH_4574 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BMWSH_4575 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BMWSH_4579 SM00859 Semialdehyde dehydrogenase, NAD binding domain BMWSH_4580 SM00100 Cyclic nucleotide-monophosphate binding domain BMWSH_4580 SM00419 helix_turn_helix, cAMP Regulatory protein BMWSH_4591 SM00382 ATPases associated with a variety of cellular activities BMWSH_4597 SM00354 helix_turn _helix lactose operon repressor BMWSH_4598 SM00642 Alpha-amylase domain BMWSH_4601 SM00938 Nitrogen regulatory protein P-II BMWSH_4619 SM00822 BMWSH_4619 BMWSH_4622 SM00914 BMWSH_4622 BMWSH_4630 SM00849 Metallo-beta-lactamase superfamily BMWSH_4631 SM00342 helix_turn_helix, arabinose operon control protein BMWSH_4631 SM00448 cheY-homologous receiver domain BMWSH_4632 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_4642 SM00014 Acid phosphatase homologues BMWSH_4646 SM00382 ATPases associated with a variety of cellular activities BMWSH_4654 SM00347 helix_turn_helix multiple antibiotic resistance protein BMWSH_4659 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMWSH_4661 SM00382 ATPases associated with a variety of cellular activities BMWSH_4663 SM00411 bacterial (prokaryotic) histone like domain BMWSH_4666 SM00729 Elongator protein 3, MiaB family, Radical SAM BMWSH_4673 SM00382 ATPases associated with a variety of cellular activities BMWSH_4676 SM00116 Domain in cystathionine beta-synthase and other proteins. BMWSH_4676 SM01091 Transporter associated domain BMWSH_4679 SM00855 Phosphoglycerate mutase family BMWSH_4689 SM00062 Bacterial periplasmic substrate-binding proteins BMWSH_4689 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BMWSH_4691 SM00829 Enoylreductase BMWSH_4710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMWSH_4710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_4714 SM00829 Enoylreductase BMWSH_4719 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BMWSH_4728 SM00864 Tubulin/FtsZ family, GTPase domain BMWSH_4728 SM00865 Tubulin/FtsZ family, C-terminal domain BMWSH_4733 SM00363 S4 RNA-binding domain BMWSH_4741 SM00344 helix_turn_helix ASNC type BMWSH_4746 SM00354 helix_turn _helix lactose operon repressor BMWSH_4755 SM00354 helix_turn _helix lactose operon repressor BMWSH_4761 SM00155 Phospholipase D. Active site motifs. BMWSH_4764 SM00287 Bacterial SH3 domain homologues BMWSH_4768 SM00257 Lysin motif BMWSH_4776 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BMWSH_4783 SM00382 ATPases associated with a variety of cellular activities BMWSH_4785 SM00729 Elongator protein 3, MiaB family, Radical SAM BMWSH_4785 SM00876 Biotin and Thiamin Synthesis associated domain BMWSH_4802 SM00763 PrkA AAA domain BMWSH_4806 SM00567 E-Z type HEAT repeats BMWSH_4807 SM00873 B3/4 domain BMWSH_4815 SM00382 ATPases associated with a variety of cellular activities BMWSH_4818 SM00382 ATPases associated with a variety of cellular activities BMWSH_4824 SM00478 endonuclease III BMWSH_4824 SM00525 BMWSH_4824 BMWSH_4829 SM00822 BMWSH_4829 BMWSH_4835 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMWSH_4835 SM00387 Histidine kinase-like ATPases BMWSH_4835 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_4836 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_4852 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMWSH_4858 SM00226 Low molecular weight phosphatase family BMWSH_4870 SM00382 ATPases associated with a variety of cellular activities BMWSH_4874 SM01065 Starch binding domain BMWSH_4886 SM00487 DEAD-like helicases superfamily BMWSH_4886 SM00490 helicase superfamily c-terminal domain BMWSH_4887 SM00091 PAS domain BMWSH_4887 SM00387 Histidine kinase-like ATPases BMWSH_4887 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_4890 SM00448 cheY-homologous receiver domain BMWSH_4891 SM00091 PAS domain BMWSH_4891 SM00387 Histidine kinase-like ATPases BMWSH_4906 SM00014 Acid phosphatase homologues BMWSH_4907 SM00382 ATPases associated with a variety of cellular activities BMWSH_4910 SM00448 cheY-homologous receiver domain BMWSH_4910 SM00862 Transcriptional regulatory protein, C terminal BMWSH_4911 SM00387 Histidine kinase-like ATPases BMWSH_4911 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_4912 SM00448 cheY-homologous receiver domain BMWSH_4912 SM00862 Transcriptional regulatory protein, C terminal BMWSH_4913 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_4913 SM00387 Histidine kinase-like ATPases BMWSH_4913 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_4924 SM00422 helix_turn_helix, mercury resistance BMWSH_4928 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMWSH_4928 SM00387 Histidine kinase-like ATPases BMWSH_4928 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_4936 SM00046 Diacylglycerol kinase catalytic domain (presumed) BMWSH_4937 SM00845 GatB domain BMWSH_4943 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BMWSH_4943 SM00292 breast cancer carboxy-terminal domain BMWSH_4943 SM00532 Ligase N family BMWSH_4953 SM01211 BMWSH_4953 BMWSH_4956 SM00998 Adenylosuccinate lyase C-terminus BMWSH_4958 SM01001 AIR carboxylase BMWSH_4962 SM00493 BMWSH_4962 BMWSH_4964 SM00382 ATPases associated with a variety of cellular activities BMWSH_4967 SM00257 Lysin motif BMWSH_4967 SM00636 BMWSH_4967 BMWSH_4973 SM00936 Penicillin-binding protein 5, C-terminal domain BMWSH_4974 SM00116 Domain in cystathionine beta-synthase and other proteins. BMWSH_4974 SM01240 BMWSH_4974 BMWSH_4978 SM00460 Transglutaminase/protease-like homologues BMWSH_4982 SM00883 Chaperonin 10 Kd subunit BMWSH_4987 SM00881 CoA binding domain BMWSH_4988 SM00382 ATPases associated with a variety of cellular activities BMWSH_4993 SM00731 SprT homologues. BMWSH_4995 SM00316 Ribosomal protein S1-like RNA-binding domain BMWSH_4995 SM00732 Likely ribonuclease with RNase H fold. BMWSH_4996 SM00331 Sigma factor PP2C-like phosphatases BMWSH_5000 SM00331 Sigma factor PP2C-like phosphatases BMWSH_5001 SM00387 Histidine kinase-like ATPases BMWSH_5006 SM01005 Alanine racemase, C-terminal domain BMWSH_5011 SM00487 DEAD-like helicases superfamily BMWSH_5011 SM00490 helicase superfamily c-terminal domain BMWSH_5015 SM00900 BMWSH_5015 BMWSH_5018 SM00387 Histidine kinase-like ATPases BMWSH_5018 SM00388 His Kinase A (phosphoacceptor) domain BMWSH_5020 SM00448 cheY-homologous receiver domain BMWSH_5020 SM00862 Transcriptional regulatory protein, C terminal BMWSH_5023 SM00382 ATPases associated with a variety of cellular activities BMWSH_5024 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_5044 SM01251 BMWSH_5044 BMWSH_5048 SM00646 BMWSH_5048 BMWSH_5054 SM00966 SpoVT / AbrB like domain BMWSH_5058 SM00487 DEAD-like helicases superfamily BMWSH_5058 SM00490 helicase superfamily c-terminal domain BMWSH_5062 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_5063 SM00530 Helix-turn-helix XRE-family like proteins BMWSH_5069 SM00382 ATPases associated with a variety of cellular activities BMWSH_5070 SM00382 ATPases associated with a variety of cellular activities BMWSH_5072 SM00662 RNA polymerases D BMWSH_5076 SM00316 Ribosomal protein S1-like RNA-binding domain BMWSH_5088 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BMWSH_5089 SM01374 BMWSH_5089 BMWSH_5093 SM00322 K homology RNA-binding domain BMWSH_5096 SM01382 BMWSH_5096 BMWSH_5096 SM01383 BMWSH_5096 BMWSH_5100 SM01403 BMWSH_5100 BMWSH_5102 SM00838 Elongation factor G C-terminus BMWSH_5102 SM00889 Elongation factor G, domain IV BMWSH_5106 SM00663 RNA polymerase I subunit A N-terminus BMWSH_5112 SM00649 Ribosomal protein L11/L12 BMWSH_5113 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BMWSH_5113 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BMWSH_5115 SM00421 helix_turn_helix, Lux Regulon BMWSH_5117 SM00967 RNA 2'-O ribose methyltransferase substrate binding BMWSH_5118 SM00535 Ribonuclease III family BMWSH_5119 SM00840 BMWSH_5119 BMWSH_5124 SM00670 Large family of predicted nucleotide-binding domains BMWSH_5126 SM00382 ATPases associated with a variety of cellular activities BMWSH_5127 SM00382 ATPases associated with a variety of cellular activities BMWSH_5127 SM01086 C-terminal, D2-small domain, of ClpB protein BMWSH_5133 SM00905 Dihydroneopterin aldolase BMWSH_5140 SM00382 ATPases associated with a variety of cellular activities BMWSH_5142 SM00977 TilS substrate C-terminal domain BMWSH_5143 SM00220 Serine/Threonine protein kinases, catalytic domain BMWSH_5145 SM00331 Sigma factor PP2C-like phosphatases BMWSH_5145 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BMWSH_5147 SM00316 Ribosomal protein S1-like RNA-binding domain BMWSH_5152 SM00363 S4 RNA-binding domain BMWSH_5155 SM00966 SpoVT / AbrB like domain BMWSH_5156 SM00487 DEAD-like helicases superfamily BMWSH_5156 SM00490 helicase superfamily c-terminal domain BMWSH_5156 SM00982 BMWSH_5156 BMWSH_5156 SM01058 CarD-like/TRCF domain BMWSH_5160 SM01400 BMWSH_5160 BMWSH_5170 SM00493 BMWSH_5170 BMWSH_5181 SM00434 DNA Topoisomerase IV BMWSH_5182 SM00387 Histidine kinase-like ATPases BMWSH_5182 SM00433 TopoisomeraseII BMWSH_5185 SM00480 DNA polymerase III beta subunit BMWSH_5186 SM00382 ATPases associated with a variety of cellular activities BMWSH_5186 SM00760 Bacterial dnaA protein helix-turn-helix domain BMWSH_p10001 SM00857 Resolvase, N terminal domain BMWSH_p10002 SM00914 BMWSH_p10002 BMWSH_p10012 SM00421 helix_turn_helix, Lux Regulon BMWSH_p10018 SM00422 helix_turn_helix, mercury resistance BMWSH_p10022 SM00112 Cadherin repeats.