C2I28_00070	PWY-5098	chlorophyll <i>a</i> degradation I
C2I28_00070	PWY-6927	chlorophyll <i>a</i> degradation II
C2I28_00070	PWY-7164	chlorophyll <i>a</i> degradation III
C2I28_00125	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_00125	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
C2I28_00125	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
C2I28_00125	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_00270	PWY-6519	8-amino-7-oxononanoate biosynthesis I
C2I28_00270	PWY-6578	8-amino-7-oxononanoate biosynthesis III
C2I28_00270	PWY-7147	8-amino-7-oxononanoate biosynthesis II
C2I28_00280	PWY-6519	8-amino-7-oxononanoate biosynthesis I
C2I28_00510	PWY-7511	protein ubiquitylation
C2I28_00555	PWY-6823	molybdenum cofactor biosynthesis
C2I28_00560	PWY-6823	molybdenum cofactor biosynthesis
C2I28_00615	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
C2I28_00615	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
C2I28_00615	PWY-7717	C2I28_00615
C2I28_00615	PWY-7733	C2I28_00615
C2I28_00615	PWY-7734	C2I28_00615
C2I28_00615	PWY-7765	C2I28_00615
C2I28_00730	PWY-6853	ethylene biosynthesis II (microbes)
C2I28_00735	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
C2I28_00735	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
C2I28_00825	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
C2I28_00825	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
C2I28_01075	PWY-31	canavanine degradation
C2I28_01075	PWY-4984	urea cycle
C2I28_01075	PWY-6305	putrescine biosynthesis IV
C2I28_01075	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
C2I28_01080	PWY-4041	&gamma;-glutamyl cycle
C2I28_01080	PWY-4061	glutathione-mediated detoxification I
C2I28_01080	PWY-5826	hypoglycin biosynthesis
C2I28_01080	PWY-6842	glutathione-mediated detoxification II
C2I28_01080	PWY-7112	4-hydroxy-2-nonenal detoxification
C2I28_01080	PWY-7559	glutathione degradation (DUG pathway - yeast)
C2I28_01165	PWY-7799	C2I28_01165
C2I28_01165	PWY-7800	C2I28_01165
C2I28_01240	PWY-5941	glycogen degradation II (eukaryotic)
C2I28_01240	PWY-6724	starch degradation II
C2I28_01240	PWY-6737	starch degradation V
C2I28_01240	PWY-7238	sucrose biosynthesis II
C2I28_01270	PWY-723	alkylnitronates degradation
C2I28_01460	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
C2I28_01465	PWY-5386	methylglyoxal degradation I
C2I28_01535	PWY-1042	glycolysis IV (plant cytosol)
C2I28_01535	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
C2I28_01535	PWY-5484	glycolysis II (from fructose 6-phosphate)
C2I28_01535	PWY-7385	1,3-propanediol biosynthesis (engineered)
C2I28_01685	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_01685	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
C2I28_01685	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
C2I28_01685	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_01695	PWY-4202	arsenate detoxification I (glutaredoxin)
C2I28_01695	PWY-5532	adenosine nucleotides degradation IV
C2I28_01695	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
C2I28_01695	PWY-6608	guanosine nucleotides degradation III
C2I28_01695	PWY-6609	adenine and adenosine salvage III
C2I28_01695	PWY-6611	adenine and adenosine salvage V
C2I28_01695	PWY-6620	guanine and guanosine salvage
C2I28_01695	PWY-6627	salinosporamide A biosynthesis
C2I28_01695	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
C2I28_01695	PWY-7179	purine deoxyribonucleosides degradation I
C2I28_01695	PWY-7179-1	purine deoxyribonucleosides degradation
C2I28_01855	PWY-3841	folate transformations II
C2I28_01855	PWY-6614	tetrahydrofolate biosynthesis
C2I28_01860	PWY-3841	folate transformations II
C2I28_01860	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
C2I28_01860	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
C2I28_01860	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
C2I28_01860	PWY-7199	pyrimidine deoxyribonucleosides salvage
C2I28_01860	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
C2I28_01865	PWY-2201	folate transformations I
C2I28_01865	PWY-5497	purine nucleobases degradation II (anaerobic)
C2I28_01865	PWY-7909	C2I28_01865
C2I28_01900	PWY-6409	pyoverdine I biosynthesis
C2I28_01900	PWY-6562	norspermidine biosynthesis
C2I28_01900	PWY-761	rhizobactin 1021 biosynthesis
C2I28_01900	PWY-7855	C2I28_01900
C2I28_01900	PWY-7988	C2I28_01900
C2I28_01995	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
C2I28_01995	PWY-5723	Rubisco shunt
C2I28_01995	PWY-6891	thiazole biosynthesis II (Bacillus)
C2I28_01995	PWY-6892	thiazole biosynthesis I (E. coli)
C2I28_01995	PWY-6901	superpathway of glucose and xylose degradation
C2I28_01995	PWY-7560	methylerythritol phosphate pathway II
C2I28_02060	PWY-381	nitrate reduction II (assimilatory)
C2I28_02060	PWY-5675	nitrate reduction V (assimilatory)
C2I28_02060	PWY-6549	L-glutamine biosynthesis III
C2I28_02060	PWY-6963	ammonia assimilation cycle I
C2I28_02060	PWY-6964	ammonia assimilation cycle II
C2I28_02095	PWY-2781	<i>cis</i>-zeatin biosynthesis
C2I28_02135	PWY-5392	reductive TCA cycle II
C2I28_02135	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
C2I28_02140	PWY-7533	gliotoxin biosynthesis
C2I28_02170	PWY-5269	cardiolipin biosynthesis II
C2I28_02170	PWY-5668	cardiolipin biosynthesis I
C2I28_02170	PWY-7817	C2I28_02170
C2I28_02250	PWY-2941	L-lysine biosynthesis II
C2I28_02250	PWY-2942	L-lysine biosynthesis III
C2I28_02250	PWY-5097	L-lysine biosynthesis VI
C2I28_02255	PWY-2941	L-lysine biosynthesis II
C2I28_02255	PWY-2942	L-lysine biosynthesis III
C2I28_02255	PWY-5097	L-lysine biosynthesis VI
C2I28_02255	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
C2I28_02255	PWY-6559	spermidine biosynthesis II
C2I28_02255	PWY-6562	norspermidine biosynthesis
C2I28_02255	PWY-7153	grixazone biosynthesis
C2I28_02255	PWY-7977	C2I28_02255
C2I28_02260	PWY-2941	L-lysine biosynthesis II
C2I28_02260	PWY-2942	L-lysine biosynthesis III
C2I28_02260	PWY-5097	L-lysine biosynthesis VI
C2I28_02260	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
C2I28_02260	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
C2I28_02260	PWY-6559	spermidine biosynthesis II
C2I28_02260	PWY-6562	norspermidine biosynthesis
C2I28_02260	PWY-7153	grixazone biosynthesis
C2I28_02260	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
C2I28_02260	PWY-7977	C2I28_02260
C2I28_02300	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
C2I28_02300	PWY-6167	flavin biosynthesis II (archaea)
C2I28_02300	PWY-6168	flavin biosynthesis III (fungi)
C2I28_02300	PWY-7863	C2I28_02300
C2I28_02360	PWY-7560	methylerythritol phosphate pathway II
C2I28_02365	PWY-5667	CDP-diacylglycerol biosynthesis I
C2I28_02365	PWY-5981	CDP-diacylglycerol biosynthesis III
C2I28_02365	PWY-7817	C2I28_02365
C2I28_02515	PWY-7980	C2I28_02515
C2I28_02585	PWY-5392	reductive TCA cycle II
C2I28_02585	PWY-5537	pyruvate fermentation to acetate V
C2I28_02585	PWY-5538	pyruvate fermentation to acetate VI
C2I28_02585	PWY-5690	TCA cycle II (plants and fungi)
C2I28_02585	PWY-5913	TCA cycle VI (obligate autotrophs)
C2I28_02585	PWY-6728	methylaspartate cycle
C2I28_02585	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
C2I28_02585	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
C2I28_02590	PWY-5392	reductive TCA cycle II
C2I28_02590	PWY-5537	pyruvate fermentation to acetate V
C2I28_02590	PWY-5538	pyruvate fermentation to acetate VI
C2I28_02590	PWY-5690	TCA cycle II (plants and fungi)
C2I28_02590	PWY-5913	TCA cycle VI (obligate autotrophs)
C2I28_02590	PWY-6728	methylaspartate cycle
C2I28_02590	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
C2I28_02590	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
C2I28_02615	PWY-6829	tRNA methylation (yeast)
C2I28_02615	PWY-7285	methylwyosine biosynthesis
C2I28_02615	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
C2I28_02670	PWY-5367	petroselinate biosynthesis
C2I28_02670	PWY-5971	palmitate biosynthesis II (bacteria and plants)
C2I28_02670	PWY-5973	<i>cis</i>-vaccenate biosynthesis
C2I28_02670	PWY-5989	stearate biosynthesis II (bacteria and plants)
C2I28_02670	PWY-5994	palmitate biosynthesis I (animals and fungi)
C2I28_02670	PWY-6113	superpathway of mycolate biosynthesis
C2I28_02670	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
C2I28_02670	PWY-6519	8-amino-7-oxononanoate biosynthesis I
C2I28_02670	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
C2I28_02670	PWY-7663	gondoate biosynthesis (anaerobic)
C2I28_02670	PWY-7664	oleate biosynthesis IV (anaerobic)
C2I28_02670	PWY-7858	C2I28_02670
C2I28_02670	PWYG-321	mycolate biosynthesis
C2I28_02675	PWY-4381	fatty acid biosynthesis initiation I
C2I28_02675	PWY-6799	fatty acid biosynthesis (plant mitochondria)
C2I28_02675	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
C2I28_02730	PWY-6898	thiamin salvage III
C2I28_02730	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
C2I28_02730	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
C2I28_02730	PWY-7356	thiamin salvage IV (yeast)
C2I28_02735	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
C2I28_02735	PWY-5723	Rubisco shunt
C2I28_02780	PWY-7851	C2I28_02780
C2I28_02790	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
C2I28_02815	PWY-5686	UMP biosynthesis
C2I28_02815	PWY-7790	C2I28_02815
C2I28_02815	PWY-7791	C2I28_02815
C2I28_02820	PWY-5686	UMP biosynthesis
C2I28_02820	PWY-7790	C2I28_02820
C2I28_02820	PWY-7791	C2I28_02820
C2I28_02835	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
C2I28_02835	PWY-5686	UMP biosynthesis
C2I28_02835	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
C2I28_02835	PWY-7790	C2I28_02835
C2I28_02835	PWY-7791	C2I28_02835
C2I28_02840	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
C2I28_02840	PWY-5686	UMP biosynthesis
C2I28_02840	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
C2I28_02840	PWY-7790	C2I28_02840
C2I28_02840	PWY-7791	C2I28_02840
C2I28_02845	PWY-5686	UMP biosynthesis
C2I28_02845	PWY-7790	C2I28_02845
C2I28_02845	PWY-7791	C2I28_02845
C2I28_02850	PWY-5686	UMP biosynthesis
C2I28_02850	PWY-7790	C2I28_02850
C2I28_02850	PWY-7791	C2I28_02850
C2I28_02860	PWY-7183	pyrimidine nucleobases salvage I
C2I28_02870	PWY-7884	C2I28_02870
C2I28_02905	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
C2I28_02950	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
C2I28_02950	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
C2I28_02950	PWY-7953	C2I28_02950
C2I28_02955	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_02955	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
C2I28_02955	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
C2I28_02955	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_02960	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
C2I28_02960	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
C2I28_02965	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_02965	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
C2I28_02965	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_03005	PWY-6654	phosphopantothenate biosynthesis III
C2I28_03010	PWY-4381	fatty acid biosynthesis initiation I
C2I28_03010	PWY-5743	3-hydroxypropanoate cycle
C2I28_03010	PWY-5744	glyoxylate assimilation
C2I28_03010	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
C2I28_03010	PWY-6722	candicidin biosynthesis
C2I28_03070	PWY-7851	C2I28_03070
C2I28_03130	PWY-101	photosynthesis light reactions
C2I28_03155	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
C2I28_03160	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
C2I28_03190	PWY-5958	acridone alkaloid biosynthesis
C2I28_03190	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
C2I28_03190	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
C2I28_03195	PWY-6164	3-dehydroquinate biosynthesis I
C2I28_03200	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
C2I28_03210	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
C2I28_03210	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
C2I28_03210	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
C2I28_03210	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
C2I28_03210	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
C2I28_03210	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
C2I28_03210	PWY-7205	CMP phosphorylation
C2I28_03210	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
C2I28_03210	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
C2I28_03210	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
C2I28_03210	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
C2I28_03210	PWY-7224	purine deoxyribonucleosides salvage
C2I28_03210	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
C2I28_03210	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
C2I28_03215	PWY-5807	heptaprenyl diphosphate biosynthesis
C2I28_03220	PWY-5839	menaquinol-7 biosynthesis
C2I28_03220	PWY-5844	menaquinol-9 biosynthesis
C2I28_03220	PWY-5849	menaquinol-6 biosynthesis
C2I28_03220	PWY-5890	menaquinol-10 biosynthesis
C2I28_03220	PWY-5891	menaquinol-11 biosynthesis
C2I28_03220	PWY-5892	menaquinol-12 biosynthesis
C2I28_03220	PWY-5895	menaquinol-13 biosynthesis
C2I28_03225	PWY-5807	heptaprenyl diphosphate biosynthesis
C2I28_03235	PWY-5663	tetrahydrobiopterin biosynthesis I
C2I28_03235	PWY-5664	tetrahydrobiopterin biosynthesis II
C2I28_03235	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
C2I28_03235	PWY-6703	preQ<sub>0</sub> biosynthesis
C2I28_03235	PWY-6983	tetrahydrobiopterin biosynthesis III
C2I28_03235	PWY-7442	drosopterin and aurodrosopterin biosynthesis
C2I28_03235	PWY-7852	C2I28_03235
C2I28_03260	PWY-5667	CDP-diacylglycerol biosynthesis I
C2I28_03260	PWY-5981	CDP-diacylglycerol biosynthesis III
C2I28_03260	PWY-7902	C2I28_03260
C2I28_03285	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
C2I28_03285	PWY-6174	mevalonate pathway II (archaea)
C2I28_03285	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
C2I28_03285	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
C2I28_03285	PWY-7102	bisabolene biosynthesis
C2I28_03285	PWY-7391	isoprene biosynthesis II (engineered)
C2I28_03285	PWY-7524	mevalonate pathway III (archaea)
C2I28_03285	PWY-7560	methylerythritol phosphate pathway II
C2I28_03285	PWY-922	mevalonate pathway I
C2I28_03300	PWY-7205	CMP phosphorylation
C2I28_03440	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_03440	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_03480	PWY-2941	L-lysine biosynthesis II
C2I28_03480	PWY-2942	L-lysine biosynthesis III
C2I28_03480	PWY-5097	L-lysine biosynthesis VI
C2I28_03535	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_03535	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_03540	PWY-4202	arsenate detoxification I (glutaredoxin)
C2I28_03540	PWY-5532	adenosine nucleotides degradation IV
C2I28_03540	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
C2I28_03540	PWY-6608	guanosine nucleotides degradation III
C2I28_03540	PWY-6609	adenine and adenosine salvage III
C2I28_03540	PWY-6611	adenine and adenosine salvage V
C2I28_03540	PWY-6620	guanine and guanosine salvage
C2I28_03540	PWY-6627	salinosporamide A biosynthesis
C2I28_03540	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
C2I28_03540	PWY-7179	purine deoxyribonucleosides degradation I
C2I28_03540	PWY-7179-1	purine deoxyribonucleosides degradation
C2I28_03545	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
C2I28_03635	PWY-3341	L-proline biosynthesis III
C2I28_03635	PWY-4981	L-proline biosynthesis II (from arginine)
C2I28_03635	PWY-6344	L-ornithine degradation II (Stickland reaction)
C2I28_03655	PWY-5642	2,4-dinitrotoluene degradation
C2I28_03695	PWY-4381	fatty acid biosynthesis initiation I
C2I28_03695	PWY-5743	3-hydroxypropanoate cycle
C2I28_03695	PWY-5744	glyoxylate assimilation
C2I28_03695	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
C2I28_03695	PWY-6722	candicidin biosynthesis
C2I28_03700	PWY-5386	methylglyoxal degradation I
C2I28_03700	PWY-5741	ethylmalonyl-CoA pathway
C2I28_03700	PWY-5743	3-hydroxypropanoate cycle
C2I28_03700	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
C2I28_03700	PWY-6728	methylaspartate cycle
C2I28_03700	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
C2I28_03700	PWY-7854	C2I28_03700
C2I28_03765	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
C2I28_03765	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
C2I28_03770	PWY-5482	pyruvate fermentation to acetate II
C2I28_03770	PWY-5485	pyruvate fermentation to acetate IV
C2I28_03770	PWY-5497	purine nucleobases degradation II (anaerobic)
C2I28_03780	PWY-1281	sulfoacetaldehyde degradation I
C2I28_03780	PWY-5482	pyruvate fermentation to acetate II
C2I28_03780	PWY-5485	pyruvate fermentation to acetate IV
C2I28_03780	PWY-5497	purine nucleobases degradation II (anaerobic)
C2I28_03780	PWY-6637	sulfolactate degradation II
C2I28_03835	PWY-6891	thiazole biosynthesis II (Bacillus)
C2I28_03835	PWY-6892	thiazole biosynthesis I (E. coli)
C2I28_03835	PWY-7560	methylerythritol phosphate pathway II
C2I28_03925	PWY-7799	C2I28_03925
C2I28_03925	PWY-7800	C2I28_03925
C2I28_03930	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
C2I28_03930	PWY-6416	quinate degradation II
C2I28_03930	PWY-6707	gallate biosynthesis
C2I28_03960	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
C2I28_03960	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
C2I28_03960	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
C2I28_03960	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
C2I28_03960	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
C2I28_03960	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
C2I28_03960	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
C2I28_03960	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
C2I28_03965	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
C2I28_03965	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
C2I28_04065	PWY-2722	trehalose degradation IV
C2I28_04065	PWY-2723	trehalose degradation V
C2I28_04065	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
C2I28_04065	PWY-5661	GDP-glucose biosynthesis
C2I28_04065	PWY-621	sucrose degradation III (sucrose invertase)
C2I28_04065	PWY-7238	sucrose biosynthesis II
C2I28_04065	PWY-7385	1,3-propanediol biosynthesis (engineered)
C2I28_04095	PWY-6749	CMP-legionaminate biosynthesis I
C2I28_04130	PWY-6854	ethylene biosynthesis III (microbes)
C2I28_04235	PWY-7560	methylerythritol phosphate pathway II
C2I28_04300	PWY-6556	pyrimidine ribonucleosides salvage II
C2I28_04300	PWY-7181	pyrimidine deoxyribonucleosides degradation
C2I28_04300	PWY-7193	pyrimidine ribonucleosides salvage I
C2I28_04300	PWY-7199	pyrimidine deoxyribonucleosides salvage
C2I28_04305	PWY-7039	phosphatidate metabolism, as a signaling molecule
C2I28_04305	PWY-7817	C2I28_04305
C2I28_04435	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
C2I28_04445	PWY-3341	L-proline biosynthesis III
C2I28_04445	PWY-4981	L-proline biosynthesis II (from arginine)
C2I28_04445	PWY-6344	L-ornithine degradation II (Stickland reaction)
C2I28_04465	PWY-5381	pyridine nucleotide cycling (plants)
C2I28_04465	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
C2I28_04465	PWY-7761	C2I28_04465
C2I28_04475	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
C2I28_04495	PWY-5669	phosphatidylethanolamine biosynthesis I
C2I28_04500	PWY-5669	phosphatidylethanolamine biosynthesis I
C2I28_04530	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
C2I28_04530	PWY-6153	autoinducer AI-2 biosynthesis I
C2I28_04530	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
C2I28_04565	PWY-7193	pyrimidine ribonucleosides salvage I
C2I28_04635	PWY-7887	C2I28_04635
C2I28_04635	PWY-7892	C2I28_04635
C2I28_04640	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
C2I28_04710	PWY-6605	adenine and adenosine salvage II
C2I28_04710	PWY-6610	adenine and adenosine salvage IV
C2I28_04710	PWY-7805	C2I28_04710
C2I28_04710	PWY-7807	C2I28_04710
C2I28_04715	PWY-7805	C2I28_04715
C2I28_04715	PWY-7807	C2I28_04715
C2I28_04750	PWY-6700	queuosine biosynthesis
C2I28_04755	PWY-6700	queuosine biosynthesis
C2I28_04800	PWY-5316	nicotine biosynthesis
C2I28_04800	PWY-7342	superpathway of nicotine biosynthesis
C2I28_04805	PWY-5316	nicotine biosynthesis
C2I28_04805	PWY-5381	pyridine nucleotide cycling (plants)
C2I28_04805	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
C2I28_04805	PWY-7342	superpathway of nicotine biosynthesis
C2I28_04810	PWY-5316	nicotine biosynthesis
C2I28_04810	PWY-7342	superpathway of nicotine biosynthesis
C2I28_04815	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
C2I28_04825	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
C2I28_04930	PWY-2161	folate polyglutamylation
C2I28_04955	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
C2I28_04960	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
C2I28_04960	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
C2I28_04965	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
C2I28_04965	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
C2I28_04970	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
C2I28_04970	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
C2I28_04980	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
C2I28_05030	PWY-7396	butanol and isobutanol biosynthesis (engineered)
C2I28_05035	PWY-6871	3-methylbutanol biosynthesis
C2I28_05040	PWY-5103	L-isoleucine biosynthesis III
C2I28_05040	PWY-7111	pyruvate fermentation to isobutanol (engineered)
C2I28_05045	PWY-5101	L-isoleucine biosynthesis II
C2I28_05045	PWY-5103	L-isoleucine biosynthesis III
C2I28_05045	PWY-5104	L-isoleucine biosynthesis IV
C2I28_05045	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
C2I28_05045	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
C2I28_05045	PWY-6389	(<i>S</i>)-acetoin biosynthesis
C2I28_05045	PWY-7111	pyruvate fermentation to isobutanol (engineered)
C2I28_05050	PWY-5101	L-isoleucine biosynthesis II
C2I28_05050	PWY-5103	L-isoleucine biosynthesis III
C2I28_05050	PWY-5104	L-isoleucine biosynthesis IV
C2I28_05050	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
C2I28_05050	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
C2I28_05050	PWY-6389	(<i>S</i>)-acetoin biosynthesis
C2I28_05050	PWY-7111	pyruvate fermentation to isobutanol (engineered)
C2I28_05080	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
C2I28_05080	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
C2I28_05120	PWY-7723	C2I28_05120
C2I28_05165	PWY-3781	aerobic respiration I (cytochrome c)
C2I28_05165	PWY-4302	aerobic respiration III (alternative oxidase pathway)
C2I28_05165	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
C2I28_05165	PWY-5690	TCA cycle II (plants and fungi)
C2I28_05165	PWY-6728	methylaspartate cycle
C2I28_05165	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
C2I28_05165	PWY-7254	TCA cycle VII (acetate-producers)
C2I28_05165	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
C2I28_05170	PWY-3781	aerobic respiration I (cytochrome c)
C2I28_05170	PWY-4302	aerobic respiration III (alternative oxidase pathway)
C2I28_05170	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
C2I28_05170	PWY-5690	TCA cycle II (plants and fungi)
C2I28_05170	PWY-6728	methylaspartate cycle
C2I28_05170	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
C2I28_05170	PWY-7254	TCA cycle VII (acetate-producers)
C2I28_05170	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
C2I28_05185	PWY-2941	L-lysine biosynthesis II
C2I28_05185	PWY-2942	L-lysine biosynthesis III
C2I28_05185	PWY-5097	L-lysine biosynthesis VI
C2I28_05185	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
C2I28_05185	PWY-6559	spermidine biosynthesis II
C2I28_05185	PWY-6562	norspermidine biosynthesis
C2I28_05185	PWY-7153	grixazone biosynthesis
C2I28_05185	PWY-7977	C2I28_05185
C2I28_05230	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
C2I28_05230	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
C2I28_05230	PWY-6936	seleno-amino acid biosynthesis
C2I28_05230	PWY-702	L-methionine biosynthesis II
C2I28_05350	PWY-6834	spermidine biosynthesis III
C2I28_05355	PWY-1042	glycolysis IV (plant cytosol)
C2I28_05355	PWY-5484	glycolysis II (from fructose 6-phosphate)
C2I28_05355	PWY-6901	superpathway of glucose and xylose degradation
C2I28_05355	PWY-7003	glycerol degradation to butanol
C2I28_05360	PWY-7851	C2I28_05360
C2I28_05395	PWY-1622	formaldehyde assimilation I (serine pathway)
C2I28_05395	PWY-5392	reductive TCA cycle II
C2I28_05395	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
C2I28_05395	PWY-5690	TCA cycle II (plants and fungi)
C2I28_05395	PWY-5913	TCA cycle VI (obligate autotrophs)
C2I28_05395	PWY-6728	methylaspartate cycle
C2I28_05395	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
C2I28_05395	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
C2I28_05395	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
C2I28_05400	PWY-5913	TCA cycle VI (obligate autotrophs)
C2I28_05400	PWY-6549	L-glutamine biosynthesis III
C2I28_05400	PWY-6728	methylaspartate cycle
C2I28_05400	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
C2I28_05400	PWY-7124	ethylene biosynthesis V (engineered)
C2I28_05400	PWY-7254	TCA cycle VII (acetate-producers)
C2I28_05400	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
C2I28_05425	PWY-1042	glycolysis IV (plant cytosol)
C2I28_05425	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
C2I28_05425	PWY-5484	glycolysis II (from fructose 6-phosphate)
C2I28_05425	PWY-5723	Rubisco shunt
C2I28_05425	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
C2I28_05425	PWY-6886	1-butanol autotrophic biosynthesis
C2I28_05425	PWY-6901	superpathway of glucose and xylose degradation
C2I28_05425	PWY-7003	glycerol degradation to butanol
C2I28_05425	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
C2I28_05425	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
C2I28_05430	PWY-4381	fatty acid biosynthesis initiation I
C2I28_05430	PWY-5743	3-hydroxypropanoate cycle
C2I28_05430	PWY-5744	glyoxylate assimilation
C2I28_05430	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
C2I28_05430	PWY-6722	candicidin biosynthesis
C2I28_05435	PWY-4381	fatty acid biosynthesis initiation I
C2I28_05435	PWY-5743	3-hydroxypropanoate cycle
C2I28_05435	PWY-5744	glyoxylate assimilation
C2I28_05435	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
C2I28_05435	PWY-6722	candicidin biosynthesis
C2I28_05465	PWY-7805	C2I28_05465
C2I28_05465	PWY-7807	C2I28_05465
C2I28_05475	PWY-1281	sulfoacetaldehyde degradation I
C2I28_05475	PWY-5482	pyruvate fermentation to acetate II
C2I28_05475	PWY-5485	pyruvate fermentation to acetate IV
C2I28_05475	PWY-5497	purine nucleobases degradation II (anaerobic)
C2I28_05475	PWY-6637	sulfolactate degradation II
C2I28_05495	PWY-4983	L-citrulline-nitric oxide cycle
C2I28_05495	PWY-4984	urea cycle
C2I28_05495	PWY-5	canavanine biosynthesis
C2I28_05495	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
C2I28_05495	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
C2I28_05500	PWY-4983	L-citrulline-nitric oxide cycle
C2I28_05500	PWY-4984	urea cycle
C2I28_05500	PWY-5	canavanine biosynthesis
C2I28_05500	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
C2I28_05500	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
C2I28_05515	PWY-5482	pyruvate fermentation to acetate II
C2I28_05515	PWY-5485	pyruvate fermentation to acetate IV
C2I28_05515	PWY-5497	purine nucleobases degradation II (anaerobic)
C2I28_05550	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
C2I28_05550	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
C2I28_05550	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
C2I28_05570	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
C2I28_05645	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
C2I28_05645	PWY-3461	L-tyrosine biosynthesis II
C2I28_05645	PWY-3462	L-phenylalanine biosynthesis II
C2I28_05645	PWY-6120	L-tyrosine biosynthesis III
C2I28_05645	PWY-6164	3-dehydroquinate biosynthesis I
C2I28_05645	PWY-6627	salinosporamide A biosynthesis
C2I28_05645	PWY-7626	bacilysin biosynthesis
C2I28_05645	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
C2I28_05670	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
C2I28_05670	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
C2I28_05670	PWY-7953	C2I28_05670
C2I28_05750	PWY-6936	seleno-amino acid biosynthesis
C2I28_05855	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
C2I28_05855	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
C2I28_05860	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
C2I28_05860	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
C2I28_05890	PWY-6502	oxidized GTP and dGTP detoxification
C2I28_05910	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
C2I28_05910	PWY-6153	autoinducer AI-2 biosynthesis I
C2I28_05910	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
C2I28_05920	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
C2I28_05920	PWY-5743	3-hydroxypropanoate cycle
C2I28_05920	PWY-5744	glyoxylate assimilation
C2I28_05920	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
C2I28_05920	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
C2I28_05920	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
C2I28_05920	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
C2I28_05975	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
C2I28_05975	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
C2I28_05975	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
C2I28_05975	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
C2I28_05975	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
C2I28_05975	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
C2I28_05975	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
C2I28_05975	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
C2I28_05980	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
C2I28_05980	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
C2I28_05980	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
C2I28_05980	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
C2I28_05980	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
C2I28_05980	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
C2I28_05980	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
C2I28_05980	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
C2I28_05985	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
C2I28_05990	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
C2I28_05995	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
C2I28_06000	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
C2I28_06005	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
C2I28_06010	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
C2I28_06010	PWY-5901	2,3-dihydroxybenzoate biosynthesis
C2I28_06010	PWY-6406	salicylate biosynthesis I
C2I28_06025	PWY-5941	glycogen degradation II (eukaryotic)
C2I28_06025	PWY-6731	starch degradation III
C2I28_06025	PWY-6737	starch degradation V
C2I28_06025	PWY-7238	sucrose biosynthesis II
C2I28_06030	PWY-622	starch biosynthesis
C2I28_06040	PWY-622	starch biosynthesis
C2I28_06040	PWY-7902	C2I28_06040
C2I28_06045	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
C2I28_06045	PWY-622	starch biosynthesis
C2I28_06045	PWY-7900	C2I28_06045
C2I28_06180	PWY-5194	siroheme biosynthesis
C2I28_06180	PWY-5196	factor 430 biosynthesis
C2I28_06180	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
C2I28_06185	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
C2I28_06190	PWY-5194	siroheme biosynthesis
C2I28_06190	PWY-5196	factor 430 biosynthesis
C2I28_06190	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
C2I28_06195	PWY-5340	sulfate activation for sulfonation
C2I28_06200	PWY-5278	sulfite oxidation III
C2I28_06200	PWY-5340	sulfate activation for sulfonation
C2I28_06200	PWY-6683	sulfate reduction III (assimilatory)
C2I28_06200	PWY-6932	selenate reduction
C2I28_06235	PWY-3801	sucrose degradation II (sucrose synthase)
C2I28_06235	PWY-5054	sorbitol biosynthesis I
C2I28_06235	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
C2I28_06235	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
C2I28_06235	PWY-5659	GDP-mannose biosynthesis
C2I28_06235	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
C2I28_06235	PWY-621	sucrose degradation III (sucrose invertase)
C2I28_06235	PWY-622	starch biosynthesis
C2I28_06235	PWY-6981	chitin biosynthesis
C2I28_06235	PWY-6992	1,5-anhydrofructose degradation
C2I28_06235	PWY-7238	sucrose biosynthesis II
C2I28_06235	PWY-7347	sucrose biosynthesis III
C2I28_06235	PWY-7385	1,3-propanediol biosynthesis (engineered)
C2I28_06315	PWY-6854	ethylene biosynthesis III (microbes)
C2I28_06385	PWY-101	photosynthesis light reactions
C2I28_06400	PWY-2941	L-lysine biosynthesis II
C2I28_06400	PWY-5097	L-lysine biosynthesis VI
C2I28_06425	PWY-702	L-methionine biosynthesis II
C2I28_06480	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
C2I28_06480	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
C2I28_06525	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
C2I28_06595	PWY-1361	benzoyl-CoA degradation I (aerobic)
C2I28_06595	PWY-5109	2-methylbutanoate biosynthesis
C2I28_06595	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
C2I28_06595	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
C2I28_06595	PWY-5177	glutaryl-CoA degradation
C2I28_06595	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
C2I28_06595	PWY-6435	4-hydroxybenzoate biosynthesis V
C2I28_06595	PWY-6583	pyruvate fermentation to butanol I
C2I28_06595	PWY-6863	pyruvate fermentation to hexanol
C2I28_06595	PWY-6883	pyruvate fermentation to butanol II
C2I28_06595	PWY-6944	androstenedione degradation
C2I28_06595	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
C2I28_06595	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
C2I28_06595	PWY-7007	methyl ketone biosynthesis
C2I28_06595	PWY-7046	4-coumarate degradation (anaerobic)
C2I28_06595	PWY-7094	fatty acid salvage
C2I28_06595	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
C2I28_06595	PWY-735	jasmonic acid biosynthesis
C2I28_06595	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
C2I28_06595	PWY-7606	docosahexaenoate biosynthesis III (mammals)
C2I28_06595	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
C2I28_06595	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
C2I28_06595	PWY-7726	C2I28_06595
C2I28_06595	PWY-7778	C2I28_06595
C2I28_06595	PWY-7779	C2I28_06595
C2I28_06605	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
C2I28_06605	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
C2I28_06700	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_06700	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
C2I28_06700	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
C2I28_06700	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_06725	PWY-6823	molybdenum cofactor biosynthesis
C2I28_06725	PWY-7887	C2I28_06725
C2I28_06735	PWY-6823	molybdenum cofactor biosynthesis
C2I28_06745	PWY-5964	guanylyl molybdenum cofactor biosynthesis
C2I28_06745	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
C2I28_06750	PWY-6823	molybdenum cofactor biosynthesis
C2I28_06765	PWY-1881	formate oxidation to CO<sub>2</sub>
C2I28_06765	PWY-5497	purine nucleobases degradation II (anaerobic)
C2I28_06765	PWY-6696	oxalate degradation III
C2I28_06765	PWY-7985	C2I28_06765
C2I28_06810	PWY-1042	glycolysis IV (plant cytosol)
C2I28_06810	PWY-1622	formaldehyde assimilation I (serine pathway)
C2I28_06810	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
C2I28_06810	PWY-5484	glycolysis II (from fructose 6-phosphate)
C2I28_06810	PWY-5723	Rubisco shunt
C2I28_06810	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
C2I28_06810	PWY-6886	1-butanol autotrophic biosynthesis
C2I28_06810	PWY-6901	superpathway of glucose and xylose degradation
C2I28_06810	PWY-7003	glycerol degradation to butanol
C2I28_06810	PWY-7124	ethylene biosynthesis V (engineered)
C2I28_06810	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
C2I28_06815	PWY-1042	glycolysis IV (plant cytosol)
C2I28_06815	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
C2I28_06815	PWY-5484	glycolysis II (from fructose 6-phosphate)
C2I28_06815	PWY-5723	Rubisco shunt
C2I28_06815	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
C2I28_06815	PWY-6886	1-butanol autotrophic biosynthesis
C2I28_06815	PWY-6901	superpathway of glucose and xylose degradation
C2I28_06815	PWY-7003	glycerol degradation to butanol
C2I28_06815	PWY-7124	ethylene biosynthesis V (engineered)
C2I28_06815	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
C2I28_06820	PWY-1042	glycolysis IV (plant cytosol)
C2I28_06820	PWY-5484	glycolysis II (from fructose 6-phosphate)
C2I28_06820	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
C2I28_06820	PWY-7003	glycerol degradation to butanol
C2I28_06825	PWY-1042	glycolysis IV (plant cytosol)
C2I28_06825	PWY-5484	glycolysis II (from fructose 6-phosphate)
C2I28_06825	PWY-6886	1-butanol autotrophic biosynthesis
C2I28_06825	PWY-6901	superpathway of glucose and xylose degradation
C2I28_06825	PWY-7003	glycerol degradation to butanol
C2I28_06830	PWY-1042	glycolysis IV (plant cytosol)
C2I28_06830	PWY-5484	glycolysis II (from fructose 6-phosphate)
C2I28_06830	PWY-6901	superpathway of glucose and xylose degradation
C2I28_06830	PWY-7003	glycerol degradation to butanol
C2I28_06945	PWY-7805	C2I28_06945
C2I28_06945	PWY-7807	C2I28_06945
C2I28_06995	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
C2I28_06995	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
C2I28_07105	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
C2I28_07105	PWY-7494	choline degradation IV
C2I28_07200	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_07200	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
C2I28_07200	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_07215	PWY-7815	C2I28_07215
C2I28_07215	PWY-7816	C2I28_07215
C2I28_07215	PWY-7819	C2I28_07215
C2I28_07225	PWY-3801	sucrose degradation II (sucrose synthase)
C2I28_07225	PWY-6527	stachyose degradation
C2I28_07225	PWY-7238	sucrose biosynthesis II
C2I28_07225	PWY-7343	UDP-glucose biosynthesis
C2I28_07225	PWY-7817	C2I28_07225
C2I28_07260	PWY-5971	palmitate biosynthesis II (bacteria and plants)
C2I28_07260	PWY-5973	<i>cis</i>-vaccenate biosynthesis
C2I28_07260	PWY-5989	stearate biosynthesis II (bacteria and plants)
C2I28_07260	PWY-5994	palmitate biosynthesis I (animals and fungi)
C2I28_07260	PWY-6113	superpathway of mycolate biosynthesis
C2I28_07260	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
C2I28_07260	PWY-6519	8-amino-7-oxononanoate biosynthesis I
C2I28_07260	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
C2I28_07260	PWY-7663	gondoate biosynthesis (anaerobic)
C2I28_07260	PWY-7664	oleate biosynthesis IV (anaerobic)
C2I28_07260	PWY-7858	C2I28_07260
C2I28_07260	PWYG-321	mycolate biosynthesis
C2I28_07295	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
C2I28_07295	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
C2I28_07295	PWY-7953	C2I28_07295
C2I28_07315	PWY-7980	C2I28_07315
C2I28_07325	PWY-7980	C2I28_07325
C2I28_07370	PWY-7183	pyrimidine nucleobases salvage I
C2I28_07375	PWY-1622	formaldehyde assimilation I (serine pathway)
C2I28_07375	PWY-181	photorespiration
C2I28_07375	PWY-2161	folate polyglutamylation
C2I28_07375	PWY-2201	folate transformations I
C2I28_07375	PWY-3661	glycine betaine degradation I
C2I28_07375	PWY-3661-1	glycine betaine degradation II (mammalian)
C2I28_07375	PWY-3841	folate transformations II
C2I28_07375	PWY-5497	purine nucleobases degradation II (anaerobic)
C2I28_07425	PWY-7199	pyrimidine deoxyribonucleosides salvage
C2I28_07435	PWY-7980	C2I28_07435
C2I28_07440	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
C2I28_07440	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
C2I28_07440	PWY-7953	C2I28_07440
C2I28_07445	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
C2I28_07445	PWY-5723	Rubisco shunt
C2I28_07450	PWY-1042	glycolysis IV (plant cytosol)
C2I28_07450	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
C2I28_07450	PWY-5484	glycolysis II (from fructose 6-phosphate)
C2I28_07450	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
C2I28_07450	PWY-7385	1,3-propanediol biosynthesis (engineered)
C2I28_07465	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
C2I28_07465	PWY-7177	UTP and CTP dephosphorylation II
C2I28_07465	PWY-7185	UTP and CTP dephosphorylation I
C2I28_07495	PWY-1361	benzoyl-CoA degradation I (aerobic)
C2I28_07495	PWY-5109	2-methylbutanoate biosynthesis
C2I28_07495	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
C2I28_07495	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
C2I28_07495	PWY-5177	glutaryl-CoA degradation
C2I28_07495	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
C2I28_07495	PWY-6435	4-hydroxybenzoate biosynthesis V
C2I28_07495	PWY-6583	pyruvate fermentation to butanol I
C2I28_07495	PWY-6863	pyruvate fermentation to hexanol
C2I28_07495	PWY-6883	pyruvate fermentation to butanol II
C2I28_07495	PWY-6944	androstenedione degradation
C2I28_07495	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
C2I28_07495	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
C2I28_07495	PWY-7007	methyl ketone biosynthesis
C2I28_07495	PWY-7046	4-coumarate degradation (anaerobic)
C2I28_07495	PWY-7094	fatty acid salvage
C2I28_07495	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
C2I28_07495	PWY-735	jasmonic acid biosynthesis
C2I28_07495	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
C2I28_07495	PWY-7606	docosahexaenoate biosynthesis III (mammals)
C2I28_07495	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
C2I28_07495	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
C2I28_07495	PWY-7726	C2I28_07495
C2I28_07495	PWY-7778	C2I28_07495
C2I28_07495	PWY-7779	C2I28_07495
C2I28_07530	PWY-40	putrescine biosynthesis I
C2I28_07530	PWY-6305	putrescine biosynthesis IV
C2I28_07540	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_07540	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
C2I28_07540	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
C2I28_07540	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_07580	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
C2I28_07580	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
C2I28_07585	PWY-1281	sulfoacetaldehyde degradation I
C2I28_07585	PWY-5482	pyruvate fermentation to acetate II
C2I28_07585	PWY-5485	pyruvate fermentation to acetate IV
C2I28_07585	PWY-5497	purine nucleobases degradation II (anaerobic)
C2I28_07585	PWY-6637	sulfolactate degradation II
C2I28_07625	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
C2I28_07650	PWY-6910	hydroxymethylpyrimidine salvage
C2I28_07650	PWY-7356	thiamin salvage IV (yeast)
C2I28_07650	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
C2I28_07660	PWY-2721	trehalose degradation III
C2I28_07660	PWY-2722	trehalose degradation IV
C2I28_07660	PWY-7459	kojibiose degradation
C2I28_07760	PWY-3341	L-proline biosynthesis III
C2I28_07760	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
C2I28_07765	PWY-3341	L-proline biosynthesis III
C2I28_07765	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
C2I28_07900	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
C2I28_07915	PWY-7805	C2I28_07915
C2I28_07915	PWY-7807	C2I28_07915
C2I28_08075	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
C2I28_08075	PWY-6596	adenosine nucleotides degradation I
C2I28_08075	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
C2I28_08080	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_08080	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_08085	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
C2I28_08090	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
C2I28_08095	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
C2I28_08255	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
C2I28_08255	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
C2I28_08255	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
C2I28_08255	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
C2I28_08255	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
C2I28_08255	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
C2I28_08335	PWY-7560	methylerythritol phosphate pathway II
C2I28_08355	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
C2I28_08370	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
C2I28_08455	PWY-6599	guanine and guanosine salvage II
C2I28_08455	PWY-6609	adenine and adenosine salvage III
C2I28_08455	PWY-6610	adenine and adenosine salvage IV
C2I28_08455	PWY-6620	guanine and guanosine salvage
C2I28_08465	PWY-3961	phosphopantothenate biosynthesis II
C2I28_08475	PWY-6936	seleno-amino acid biosynthesis
C2I28_08480	PWY-5958	acridone alkaloid biosynthesis
C2I28_08480	PWY-6543	4-aminobenzoate biosynthesis
C2I28_08480	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
C2I28_08480	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
C2I28_08485	PWY-5958	acridone alkaloid biosynthesis
C2I28_08485	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
C2I28_08485	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
C2I28_08495	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
C2I28_08495	PWY-6148	tetrahydromethanopterin biosynthesis
C2I28_08495	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
C2I28_08495	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
C2I28_08500	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
C2I28_08500	PWY-6148	tetrahydromethanopterin biosynthesis
C2I28_08500	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
C2I28_08500	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
C2I28_08500	PWY-7852	C2I28_08500
C2I28_08500	PWY-7853	C2I28_08500
C2I28_08560	PWY-7560	methylerythritol phosphate pathway II
C2I28_08565	PWY-7560	methylerythritol phosphate pathway II
C2I28_08570	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
C2I28_08575	PWY-6936	seleno-amino acid biosynthesis
C2I28_08575	PWY-7274	D-cycloserine biosynthesis
C2I28_08575	PWY-7870	C2I28_08575
C2I28_08790	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
C2I28_08795	PWY-7799	C2I28_08795
C2I28_08795	PWY-7800	C2I28_08795
C2I28_08865	PWY-7883	C2I28_08865
C2I28_08960	PWY-31	canavanine degradation
C2I28_08960	PWY-4984	urea cycle
C2I28_08960	PWY-6305	putrescine biosynthesis IV
C2I28_08960	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
C2I28_08990	PWY-6749	CMP-legionaminate biosynthesis I
C2I28_08995	PWY-6749	CMP-legionaminate biosynthesis I
C2I28_09025	PWY-6531	mannitol cycle
C2I28_09105	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
C2I28_09105	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
C2I28_09105	PWY-7953	C2I28_09105
C2I28_09110	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
C2I28_09110	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
C2I28_09110	PWY-7953	C2I28_09110
C2I28_09130	PWY-6012	acyl carrier protein metabolism I
C2I28_09130	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
C2I28_09130	PWY-6289	petrobactin biosynthesis
C2I28_09140	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
C2I28_09365	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
C2I28_09425	PWY-6123	inosine-5'-phosphate biosynthesis I
C2I28_09425	PWY-7234	inosine-5'-phosphate biosynthesis III
C2I28_09435	PWY-6123	inosine-5'-phosphate biosynthesis I
C2I28_09435	PWY-6124	inosine-5'-phosphate biosynthesis II
C2I28_09435	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
C2I28_09435	PWY-7234	inosine-5'-phosphate biosynthesis III
C2I28_09440	PWY-6123	inosine-5'-phosphate biosynthesis I
C2I28_09440	PWY-6124	inosine-5'-phosphate biosynthesis II
C2I28_09440	PWY-7234	inosine-5'-phosphate biosynthesis III
C2I28_09445	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
C2I28_09445	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
C2I28_09445	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
C2I28_09450	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
C2I28_09450	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
C2I28_09450	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
C2I28_09455	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
C2I28_09455	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
C2I28_09455	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
C2I28_09460	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
C2I28_09460	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
C2I28_09460	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
C2I28_09460	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
C2I28_09465	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
C2I28_09465	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
C2I28_09465	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
C2I28_09470	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
C2I28_09470	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
C2I28_09475	PWY-6123	inosine-5'-phosphate biosynthesis I
C2I28_09475	PWY-6124	inosine-5'-phosphate biosynthesis II
C2I28_09475	PWY-7234	inosine-5'-phosphate biosynthesis III
C2I28_09480	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
C2I28_09480	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
C2I28_09480	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
C2I28_09490	PWY-6610	adenine and adenosine salvage IV
C2I28_09535	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
C2I28_09590	PWY-7799	C2I28_09590
C2I28_09590	PWY-7800	C2I28_09590
C2I28_09600	PWY-723	alkylnitronates degradation
C2I28_09855	PWY-6724	starch degradation II
C2I28_09855	PWY-842	starch degradation I
C2I28_09920	PWY-5704	urea degradation II
C2I28_09920	PWY-6610	adenine and adenosine salvage IV
C2I28_10010	PWY-5392	reductive TCA cycle II
C2I28_10010	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
C2I28_10010	PWY-5690	TCA cycle II (plants and fungi)
C2I28_10010	PWY-5913	TCA cycle VI (obligate autotrophs)
C2I28_10010	PWY-6728	methylaspartate cycle
C2I28_10010	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
C2I28_10010	PWY-7254	TCA cycle VII (acetate-producers)
C2I28_10010	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
C2I28_10130	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
C2I28_10335	PWY-6700	queuosine biosynthesis
C2I28_10395	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
C2I28_10405	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
C2I28_10440	PWY-6527	stachyose degradation
C2I28_10445	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
C2I28_10605	PWY-5642	2,4-dinitrotoluene degradation
C2I28_10625	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
C2I28_10755	PWY-5481	pyruvate fermentation to lactate
C2I28_10755	PWY-6901	superpathway of glucose and xylose degradation
C2I28_10815	PWY-4261	glycerol degradation I
C2I28_10820	PWY-4261	glycerol degradation I
C2I28_10820	PWY-6118	glycerol-3-phosphate shuttle
C2I28_10820	PWY-6952	glycerophosphodiester degradation
C2I28_10825	PWY-6749	CMP-legionaminate biosynthesis I
C2I28_10895	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
C2I28_10895	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
C2I28_10895	PWY-6897	thiamin salvage II
C2I28_10895	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
C2I28_10895	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
C2I28_10895	PWY-7356	thiamin salvage IV (yeast)
C2I28_10895	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
C2I28_10900	PWY-7396	butanol and isobutanol biosynthesis (engineered)
C2I28_10900	PWY-7806	C2I28_10900
C2I28_10910	PWY-6891	thiazole biosynthesis II (Bacillus)
C2I28_10910	PWY-6892	thiazole biosynthesis I (E. coli)
C2I28_10920	PWY-6910	hydroxymethylpyrimidine salvage
C2I28_10920	PWY-7356	thiamin salvage IV (yeast)
C2I28_10920	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
C2I28_10925	PWY-1622	formaldehyde assimilation I (serine pathway)
C2I28_10925	PWY-5484	glycolysis II (from fructose 6-phosphate)
C2I28_11150	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_11150	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
C2I28_11150	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
C2I28_11150	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_11155	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
C2I28_11155	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
C2I28_11155	PWY-7766	C2I28_11155
C2I28_11165	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
C2I28_11205	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
C2I28_11205	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
C2I28_11335	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
C2I28_11470	PWY-6853	ethylene biosynthesis II (microbes)
C2I28_11475	PWY-3341	L-proline biosynthesis III
C2I28_11475	PWY-4981	L-proline biosynthesis II (from arginine)
C2I28_11475	PWY-6344	L-ornithine degradation II (Stickland reaction)
C2I28_11475	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
C2I28_11545	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
C2I28_11545	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
C2I28_11550	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
C2I28_11555	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
C2I28_11555	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
C2I28_11565	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
C2I28_11565	PWY-5686	UMP biosynthesis
C2I28_11565	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
C2I28_11565	PWY-7790	C2I28_11565
C2I28_11565	PWY-7791	C2I28_11565
C2I28_11570	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
C2I28_11570	PWY-5686	UMP biosynthesis
C2I28_11570	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
C2I28_11570	PWY-7790	C2I28_11570
C2I28_11570	PWY-7791	C2I28_11570
C2I28_11575	PWY-4981	L-proline biosynthesis II (from arginine)
C2I28_11575	PWY-4984	urea cycle
C2I28_11575	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
C2I28_11605	PWY-3821	galactose degradation III
C2I28_11605	PWY-6317	galactose degradation I (Leloir pathway)
C2I28_11605	PWY-6527	stachyose degradation
C2I28_11610	PWY-6317	galactose degradation I (Leloir pathway)
C2I28_11610	PWY-6527	stachyose degradation
C2I28_11645	PWY-4381	fatty acid biosynthesis initiation I
C2I28_11820	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
C2I28_11820	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
C2I28_11820	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
C2I28_11950	PWY-4261	glycerol degradation I
C2I28_11950	PWY-5530	sorbitol biosynthesis II
C2I28_12065	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
C2I28_12100	PWY-6683	sulfate reduction III (assimilatory)
C2I28_12115	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
C2I28_12120	PWY-5101	L-isoleucine biosynthesis II
C2I28_12120	PWY-5103	L-isoleucine biosynthesis III
C2I28_12120	PWY-5104	L-isoleucine biosynthesis IV
C2I28_12120	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
C2I28_12120	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
C2I28_12120	PWY-6389	(<i>S</i>)-acetoin biosynthesis
C2I28_12120	PWY-7111	pyruvate fermentation to isobutanol (engineered)
C2I28_12155	PWY-4381	fatty acid biosynthesis initiation I
C2I28_12155	PWY-6799	fatty acid biosynthesis (plant mitochondria)
C2I28_12155	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
C2I28_12160	PWY-5794	malonate degradation I (biotin-independent)
C2I28_12160	PWY-6060	malonate degradation II (biotin-dependent)
C2I28_12165	PWY-5796	malonate decarboxylase activation
C2I28_12175	PWY-4381	fatty acid biosynthesis initiation I
C2I28_12175	PWY-5743	3-hydroxypropanoate cycle
C2I28_12175	PWY-5744	glyoxylate assimilation
C2I28_12175	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
C2I28_12175	PWY-6060	malonate degradation II (biotin-dependent)
C2I28_12175	PWY-6722	candicidin biosynthesis
C2I28_12180	PWY-5796	malonate decarboxylase activation
C2I28_12240	PWY-1622	formaldehyde assimilation I (serine pathway)
C2I28_12240	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
C2I28_12240	PWY-5913	TCA cycle VI (obligate autotrophs)
C2I28_12240	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
C2I28_12240	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
C2I28_12240	PWY-6549	L-glutamine biosynthesis III
C2I28_12240	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
C2I28_12240	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
C2I28_12240	PWY-7124	ethylene biosynthesis V (engineered)
C2I28_12295	PWY-6614	tetrahydrofolate biosynthesis
C2I28_12325	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
C2I28_12510	PWY-40	putrescine biosynthesis I
C2I28_12510	PWY-6305	putrescine biosynthesis IV
C2I28_12605	PWY-6899	base-degraded thiamin salvage
C2I28_12605	PWY-7356	thiamin salvage IV (yeast)
C2I28_12635	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
C2I28_12635	PWY-5686	UMP biosynthesis
C2I28_12635	PWY-7790	C2I28_12635
C2I28_12635	PWY-7791	C2I28_12635
C2I28_12635	PWY-7796	C2I28_12635
C2I28_12745	PWY-3861	mannitol degradation II
C2I28_12745	PWY-3881	mannitol biosynthesis
C2I28_12745	PWY-5659	GDP-mannose biosynthesis
C2I28_12745	PWY-6992	1,5-anhydrofructose degradation
C2I28_12745	PWY-7456	mannan degradation
C2I28_12745	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
C2I28_12745	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
C2I28_12935	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
C2I28_12960	PWY-4041	&gamma;-glutamyl cycle
C2I28_12960	PWY-7942	C2I28_12960
C2I28_12970	PWY-4041	&gamma;-glutamyl cycle
C2I28_12970	PWY-7942	C2I28_12970
C2I28_12995	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
C2I28_13020	PWY-5169	cyanurate degradation
C2I28_13020	PWY-5703	urea degradation I
C2I28_13020	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
C2I28_13025	PWY-5169	cyanurate degradation
C2I28_13025	PWY-5703	urea degradation I
C2I28_13170	PWY-7425	2-chloroacrylate degradation I
C2I28_13215	PWY-7883	C2I28_13215
C2I28_13250	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
C2I28_13250	PWY-5723	Rubisco shunt
C2I28_13305	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
C2I28_13315	PWY-3821	galactose degradation III
C2I28_13315	PWY-6317	galactose degradation I (Leloir pathway)
C2I28_13315	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
C2I28_13315	PWY-6527	stachyose degradation
C2I28_13315	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
C2I28_13315	PWY-7344	UDP-D-galactose biosynthesis
C2I28_13470	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
C2I28_13555	PWY-5663	tetrahydrobiopterin biosynthesis I
C2I28_13555	PWY-5664	tetrahydrobiopterin biosynthesis II
C2I28_13555	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
C2I28_13555	PWY-6703	preQ<sub>0</sub> biosynthesis
C2I28_13555	PWY-6983	tetrahydrobiopterin biosynthesis III
C2I28_13555	PWY-7442	drosopterin and aurodrosopterin biosynthesis
C2I28_13555	PWY-7852	C2I28_13555
C2I28_13585	PWY-7942	C2I28_13585
C2I28_13630	PWY-6749	CMP-legionaminate biosynthesis I
C2I28_13660	PWY-3801	sucrose degradation II (sucrose synthase)
C2I28_13660	PWY-6527	stachyose degradation
C2I28_13660	PWY-7238	sucrose biosynthesis II
C2I28_13660	PWY-7343	UDP-glucose biosynthesis
C2I28_13660	PWY-7817	C2I28_13660
C2I28_13690	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
C2I28_13695	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
C2I28_13695	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
C2I28_13705	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
C2I28_13705	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
C2I28_13715	PWY-5659	GDP-mannose biosynthesis
C2I28_13715	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
C2I28_13720	PWY-3861	mannitol degradation II
C2I28_13720	PWY-3881	mannitol biosynthesis
C2I28_13720	PWY-5659	GDP-mannose biosynthesis
C2I28_13720	PWY-6992	1,5-anhydrofructose degradation
C2I28_13720	PWY-7456	mannan degradation
C2I28_13720	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
C2I28_13720	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
C2I28_13725	PWY-6749	CMP-legionaminate biosynthesis I
C2I28_13740	PWY-3801	sucrose degradation II (sucrose synthase)
C2I28_13740	PWY-6527	stachyose degradation
C2I28_13740	PWY-7238	sucrose biosynthesis II
C2I28_13740	PWY-7343	UDP-glucose biosynthesis
C2I28_13740	PWY-7817	C2I28_13740
C2I28_13850	PWY-6683	sulfate reduction III (assimilatory)
C2I28_13860	PWY-5194	siroheme biosynthesis
C2I28_13860	PWY-5196	factor 430 biosynthesis
C2I28_13860	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
C2I28_13955	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
C2I28_13955	PWY-6855	chitin degradation I (archaea)
C2I28_13955	PWY-6906	chitin derivatives degradation
C2I28_13960	PWY-6906	chitin derivatives degradation
C2I28_13960	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
C2I28_13960	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
C2I28_14170	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
C2I28_14170	PWY-5491	diethylphosphate degradation
C2I28_14215	PWY-5676	acetyl-CoA fermentation to butanoate II
C2I28_14215	PWY-5741	ethylmalonyl-CoA pathway
C2I28_14215	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
C2I28_14215	PWY-7948	C2I28_14215
C2I28_14240	PWY-5381	pyridine nucleotide cycling (plants)
C2I28_14280	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
C2I28_14280	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
C2I28_14285	PWY-6754	<i>S</i>-methyl-5'-thioadenosine degradation I
C2I28_14300	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
C2I28_14300	PWY-5532	adenosine nucleotides degradation IV
C2I28_14300	PWY-5723	Rubisco shunt
C2I28_14305	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
C2I28_14310	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
C2I28_14315	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
C2I28_14315	PWY-5389	3-methylthiopropanoate biosynthesis
C2I28_14415	PWY-6703	preQ<sub>0</sub> biosynthesis
C2I28_14425	PWY-6703	preQ<sub>0</sub> biosynthesis
C2I28_14430	PWY-6700	queuosine biosynthesis
C2I28_14485	PWY-3781	aerobic respiration I (cytochrome c)
C2I28_14485	PWY-4521	arsenite oxidation I (respiratory)
C2I28_14485	PWY-6692	Fe(II) oxidation
C2I28_14485	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
C2I28_14505	PWY-2201	folate transformations I
C2I28_14505	PWY-3841	folate transformations II
C2I28_14505	PWY-7977	C2I28_14505
C2I28_14510	PWY-2201	folate transformations I
C2I28_14510	PWY-3841	folate transformations II
C2I28_14525	PWY-6167	flavin biosynthesis II (archaea)
C2I28_14525	PWY-6168	flavin biosynthesis III (fungi)
C2I28_14525	PWY-7980	C2I28_14525
C2I28_14530	PWY-6167	flavin biosynthesis II (archaea)
C2I28_14530	PWY-6168	flavin biosynthesis III (fungi)
C2I28_14530	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
C2I28_14530	PWY-7991	C2I28_14530
C2I28_14535	PWY-6167	flavin biosynthesis II (archaea)
C2I28_14535	PWY-6168	flavin biosynthesis III (fungi)
C2I28_14690	PWY-2941	L-lysine biosynthesis II
C2I28_14695	PWY-2941	L-lysine biosynthesis II
C2I28_14785	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
C2I28_14785	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
C2I28_14860	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
C2I28_14860	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
C2I28_14885	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_14885	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
C2I28_14885	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
C2I28_14885	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_14890	PWY-5750	itaconate biosynthesis
C2I28_14890	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
C2I28_14890	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
C2I28_14910	PWY-3781	aerobic respiration I (cytochrome c)
C2I28_14910	PWY-4521	arsenite oxidation I (respiratory)
C2I28_14910	PWY-6692	Fe(II) oxidation
C2I28_14910	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
C2I28_14920	PWY-3781	aerobic respiration I (cytochrome c)
C2I28_14920	PWY-4521	arsenite oxidation I (respiratory)
C2I28_14920	PWY-6692	Fe(II) oxidation
C2I28_14920	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
C2I28_14965	PWY-2941	L-lysine biosynthesis II
C2I28_14965	PWY-2942	L-lysine biosynthesis III
C2I28_14965	PWY-5097	L-lysine biosynthesis VI
C2I28_14990	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
C2I28_14990	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
C2I28_14995	PWY-6654	phosphopantothenate biosynthesis III
C2I28_15005	PWY-5155	&beta;-alanine biosynthesis III
C2I28_15055	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_15055	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
C2I28_15055	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
C2I28_15055	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_15550	PWY-3801	sucrose degradation II (sucrose synthase)
C2I28_15550	PWY-6527	stachyose degradation
C2I28_15550	PWY-7238	sucrose biosynthesis II
C2I28_15550	PWY-7343	UDP-glucose biosynthesis
C2I28_15550	PWY-7817	C2I28_15550
C2I28_15650	PWY-101	photosynthesis light reactions
C2I28_15655	PWY-7793	C2I28_15655
C2I28_15680	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
C2I28_15690	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
C2I28_15690	PWY-5686	UMP biosynthesis
C2I28_15690	PWY-7790	C2I28_15690
C2I28_15690	PWY-7791	C2I28_15690
C2I28_15690	PWY-7796	C2I28_15690
C2I28_15725	PWY-1042	glycolysis IV (plant cytosol)
C2I28_15725	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
C2I28_15725	PWY-5484	glycolysis II (from fructose 6-phosphate)
C2I28_15725	PWY-5723	Rubisco shunt
C2I28_15725	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
C2I28_15725	PWY-6886	1-butanol autotrophic biosynthesis
C2I28_15725	PWY-6901	superpathway of glucose and xylose degradation
C2I28_15725	PWY-7003	glycerol degradation to butanol
C2I28_15725	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
C2I28_15725	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
C2I28_15765	PWY-4041	&gamma;-glutamyl cycle
C2I28_15765	PWY-4061	glutathione-mediated detoxification I
C2I28_15765	PWY-5826	hypoglycin biosynthesis
C2I28_15765	PWY-6842	glutathione-mediated detoxification II
C2I28_15765	PWY-7112	4-hydroxy-2-nonenal detoxification
C2I28_15765	PWY-7559	glutathione degradation (DUG pathway - yeast)
C2I28_15975	PWY-7799	C2I28_15975
C2I28_15975	PWY-7800	C2I28_15975
C2I28_16000	PWY-5028	L-histidine degradation II
C2I28_16000	PWY-5030	L-histidine degradation III
C2I28_16005	PWY-5028	L-histidine degradation II
C2I28_16005	PWY-5030	L-histidine degradation III
C2I28_16010	PWY-5028	L-histidine degradation II
C2I28_16010	PWY-5030	L-histidine degradation III
C2I28_16040	PWY-7052	cyanophycin metabolism
C2I28_16175	PWY-6891	thiazole biosynthesis II (Bacillus)
C2I28_16175	PWY-6892	thiazole biosynthesis I (E. coli)
C2I28_16175	PWY-7560	methylerythritol phosphate pathway II
C2I28_16200	PWY-1042	glycolysis IV (plant cytosol)
C2I28_16200	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
C2I28_16200	PWY-5484	glycolysis II (from fructose 6-phosphate)
C2I28_16200	PWY-7385	1,3-propanediol biosynthesis (engineered)
C2I28_16215	PWY-7511	protein ubiquitylation
C2I28_16230	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_16230	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
C2I28_16230	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
C2I28_16230	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_16475	PWY-3121	linamarin degradation
C2I28_16475	PWY-5176	coumarin biosynthesis (via 2-coumarate)
C2I28_16475	PWY-6002	lotaustralin degradation
C2I28_16475	PWY-6788	cellulose degradation II (fungi)
C2I28_16475	PWY-7091	linustatin bioactivation
C2I28_16475	PWY-7092	neolinustatin bioactivation
C2I28_16475	PWY-7913	C2I28_16475
C2I28_16715	PWY-5331	taurine biosynthesis
C2I28_16745	PWY-6349	CDP-archaeol biosynthesis
C2I28_16900	PWY-5392	reductive TCA cycle II
C2I28_16900	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
C2I28_16900	PWY-5690	TCA cycle II (plants and fungi)
C2I28_16900	PWY-5913	TCA cycle VI (obligate autotrophs)
C2I28_16900	PWY-6728	methylaspartate cycle
C2I28_16900	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
C2I28_16900	PWY-7254	TCA cycle VII (acetate-producers)
C2I28_16900	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
C2I28_17135	PWY-2941	L-lysine biosynthesis II
C2I28_17135	PWY-2942	L-lysine biosynthesis III
C2I28_17135	PWY-5097	L-lysine biosynthesis VI
C2I28_17180	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
C2I28_17180	PWY-5723	Rubisco shunt
C2I28_17195	PWY-6317	galactose degradation I (Leloir pathway)
C2I28_17230	PWY-1361	benzoyl-CoA degradation I (aerobic)
C2I28_17230	PWY-5109	2-methylbutanoate biosynthesis
C2I28_17230	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
C2I28_17230	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
C2I28_17230	PWY-5177	glutaryl-CoA degradation
C2I28_17230	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
C2I28_17230	PWY-6435	4-hydroxybenzoate biosynthesis V
C2I28_17230	PWY-6583	pyruvate fermentation to butanol I
C2I28_17230	PWY-6863	pyruvate fermentation to hexanol
C2I28_17230	PWY-6883	pyruvate fermentation to butanol II
C2I28_17230	PWY-6944	androstenedione degradation
C2I28_17230	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
C2I28_17230	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
C2I28_17230	PWY-7007	methyl ketone biosynthesis
C2I28_17230	PWY-7046	4-coumarate degradation (anaerobic)
C2I28_17230	PWY-7094	fatty acid salvage
C2I28_17230	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
C2I28_17230	PWY-735	jasmonic acid biosynthesis
C2I28_17230	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
C2I28_17230	PWY-7606	docosahexaenoate biosynthesis III (mammals)
C2I28_17230	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
C2I28_17230	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
C2I28_17230	PWY-7726	C2I28_17230
C2I28_17230	PWY-7778	C2I28_17230
C2I28_17230	PWY-7779	C2I28_17230
C2I28_17235	PWY-1361	benzoyl-CoA degradation I (aerobic)
C2I28_17235	PWY-5109	2-methylbutanoate biosynthesis
C2I28_17235	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
C2I28_17235	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
C2I28_17235	PWY-5177	glutaryl-CoA degradation
C2I28_17235	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
C2I28_17235	PWY-6435	4-hydroxybenzoate biosynthesis V
C2I28_17235	PWY-6583	pyruvate fermentation to butanol I
C2I28_17235	PWY-6863	pyruvate fermentation to hexanol
C2I28_17235	PWY-6883	pyruvate fermentation to butanol II
C2I28_17235	PWY-6944	androstenedione degradation
C2I28_17235	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
C2I28_17235	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
C2I28_17235	PWY-7007	methyl ketone biosynthesis
C2I28_17235	PWY-7046	4-coumarate degradation (anaerobic)
C2I28_17235	PWY-7094	fatty acid salvage
C2I28_17235	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
C2I28_17235	PWY-735	jasmonic acid biosynthesis
C2I28_17235	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
C2I28_17235	PWY-7606	docosahexaenoate biosynthesis III (mammals)
C2I28_17235	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
C2I28_17235	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
C2I28_17235	PWY-7726	C2I28_17235
C2I28_17235	PWY-7778	C2I28_17235
C2I28_17235	PWY-7779	C2I28_17235
C2I28_17275	PWY-723	alkylnitronates degradation
C2I28_17305	PWY-3781	aerobic respiration I (cytochrome c)
C2I28_17305	PWY-4521	arsenite oxidation I (respiratory)
C2I28_17305	PWY-6692	Fe(II) oxidation
C2I28_17305	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
C2I28_17370	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
C2I28_17370	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
C2I28_17430	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
C2I28_17430	PWY-7248	pectin degradation III
C2I28_17445	PWY-6531	mannitol cycle
C2I28_17460	PWY-6807	xyloglucan degradation II (exoglucanase)
C2I28_17610	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
C2I28_17630	PWY-6168	flavin biosynthesis III (fungi)
C2I28_17630	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
C2I28_17630	PWY-7991	C2I28_17630
C2I28_17635	PWY-7991	C2I28_17635
C2I28_17730	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
C2I28_17730	PWY-2161	folate polyglutamylation
C2I28_17730	PWY-2201	folate transformations I
C2I28_17730	PWY-3841	folate transformations II
C2I28_17800	PWY-5443	aminopropanol phosphate biosynthesis I
C2I28_17805	PWY-6269	adenosylcobalamin salvage from cobinamide II
C2I28_17805	PWY-7962	C2I28_17805
C2I28_17805	PWY-7971	C2I28_17805
C2I28_17805	PWY-7972	C2I28_17805
C2I28_17810	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
C2I28_17810	PWY-6269	adenosylcobalamin salvage from cobinamide II
C2I28_17810	PWY-7961	C2I28_17810
C2I28_17810	PWY-7963	C2I28_17810
C2I28_17810	PWY-7964	C2I28_17810
C2I28_17810	PWY-7965	C2I28_17810
C2I28_17810	PWY-7966	C2I28_17810
C2I28_17810	PWY-7967	C2I28_17810
C2I28_17810	PWY-7968	C2I28_17810
C2I28_17810	PWY-7969	C2I28_17810
C2I28_17810	PWY-7970	C2I28_17810
C2I28_17810	PWY-7975	C2I28_17810
C2I28_17820	PWY-6269	adenosylcobalamin salvage from cobinamide II
C2I28_17820	PWY-7962	C2I28_17820
C2I28_17820	PWY-7971	C2I28_17820
C2I28_17820	PWY-7972	C2I28_17820
C2I28_17845	PWY-6654	phosphopantothenate biosynthesis III
C2I28_17875	PWY-3341	L-proline biosynthesis III
C2I28_17875	PWY-4981	L-proline biosynthesis II (from arginine)
C2I28_17875	PWY-6344	L-ornithine degradation II (Stickland reaction)
C2I28_17995	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
C2I28_17995	PWY-622	starch biosynthesis
C2I28_17995	PWY-7900	C2I28_17995
C2I28_18040	PWY-5451	acetone degradation I (to methylglyoxal)
C2I28_18040	PWY-6588	pyruvate fermentation to acetone
C2I28_18040	PWY-6876	isopropanol biosynthesis
C2I28_18040	PWY-7466	acetone degradation III (to propane-1,2-diol)
C2I28_18085	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
C2I28_18085	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
C2I28_18155	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
C2I28_18155	PWY-6168	flavin biosynthesis III (fungi)
C2I28_18155	PWY-7863	C2I28_18155
C2I28_18315	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
C2I28_18320	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
C2I28_18320	PWY-2201	folate transformations I
C2I28_18320	PWY-3841	folate transformations II
C2I28_18320	PWY-5030	L-histidine degradation III
C2I28_18320	PWY-5497	purine nucleobases degradation II (anaerobic)
C2I28_18320	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
C2I28_18320	PWY-7909	C2I28_18320
C2I28_18345	PWY-6803	phosphatidylcholine acyl editing
C2I28_18345	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
C2I28_18345	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
C2I28_18345	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
C2I28_18345	PWY-7783	C2I28_18345
C2I28_18395	PWY-3801	sucrose degradation II (sucrose synthase)
C2I28_18395	PWY-6527	stachyose degradation
C2I28_18395	PWY-7238	sucrose biosynthesis II
C2I28_18395	PWY-7343	UDP-glucose biosynthesis
C2I28_18395	PWY-7817	C2I28_18395
C2I28_18440	PWY-4381	fatty acid biosynthesis initiation I
C2I28_18495	PWY-2941	L-lysine biosynthesis II
C2I28_18495	PWY-2942	L-lysine biosynthesis III
C2I28_18495	PWY-5097	L-lysine biosynthesis VI
C2I28_18495	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
C2I28_18495	PWY-6559	spermidine biosynthesis II
C2I28_18495	PWY-6562	norspermidine biosynthesis
C2I28_18495	PWY-7153	grixazone biosynthesis
C2I28_18495	PWY-7977	C2I28_18495
C2I28_18505	PWY-6854	ethylene biosynthesis III (microbes)
C2I28_18535	PWY-6899	base-degraded thiamin salvage
C2I28_18535	PWY-7356	thiamin salvage IV (yeast)
C2I28_18570	PWY-5530	sorbitol biosynthesis II
C2I28_18620	PWY-6897	thiamin salvage II
C2I28_18620	PWY-7356	thiamin salvage IV (yeast)
C2I28_18620	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
C2I28_18625	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
C2I28_18625	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
C2I28_18625	PWY-6897	thiamin salvage II
C2I28_18625	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
C2I28_18625	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
C2I28_18625	PWY-7356	thiamin salvage IV (yeast)
C2I28_18625	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
C2I28_18670	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
C2I28_18680	PWY-6807	xyloglucan degradation II (exoglucanase)
C2I28_18725	PWY-6938	NADH repair
C2I28_18875	PWY-3821	galactose degradation III
C2I28_18875	PWY-6317	galactose degradation I (Leloir pathway)
C2I28_18875	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
C2I28_18875	PWY-6527	stachyose degradation
C2I28_18875	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
C2I28_18875	PWY-7344	UDP-D-galactose biosynthesis
C2I28_19035	PWY-5381	pyridine nucleotide cycling (plants)
C2I28_19040	PWY-5381	pyridine nucleotide cycling (plants)
C2I28_19040	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
C2I28_19040	PWY-7761	C2I28_19040
C2I28_19365	PWY-40	putrescine biosynthesis I
C2I28_19365	PWY-6305	putrescine biosynthesis IV
C2I28_19390	PWY-5839	menaquinol-7 biosynthesis
C2I28_19390	PWY-5851	demethylmenaquinol-9 biosynthesis
C2I28_19390	PWY-5852	demethylmenaquinol-8 biosynthesis I
C2I28_19390	PWY-5853	demethylmenaquinol-6 biosynthesis I
C2I28_19390	PWY-5890	menaquinol-10 biosynthesis
C2I28_19390	PWY-5891	menaquinol-11 biosynthesis
C2I28_19390	PWY-5892	menaquinol-12 biosynthesis
C2I28_19390	PWY-5895	menaquinol-13 biosynthesis
C2I28_19505	PWY-3341	L-proline biosynthesis III
C2I28_19505	PWY-4981	L-proline biosynthesis II (from arginine)
C2I28_19505	PWY-6344	L-ornithine degradation II (Stickland reaction)
C2I28_19510	PWY-3341	L-proline biosynthesis III
C2I28_19510	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
C2I28_19515	PWY-3341	L-proline biosynthesis III
C2I28_19515	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
C2I28_19655	PWY-5392	reductive TCA cycle II
C2I28_19655	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
C2I28_19655	PWY-5690	TCA cycle II (plants and fungi)
C2I28_19655	PWY-5913	TCA cycle VI (obligate autotrophs)
C2I28_19655	PWY-6728	methylaspartate cycle
C2I28_19655	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
C2I28_19655	PWY-7254	TCA cycle VII (acetate-producers)
C2I28_19655	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
C2I28_19700	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
C2I28_19700	PWY-5723	Rubisco shunt
C2I28_19795	PWY-2941	L-lysine biosynthesis II
C2I28_19795	PWY-2942	L-lysine biosynthesis III
C2I28_19795	PWY-5097	L-lysine biosynthesis VI
C2I28_19845	PWY-1361	benzoyl-CoA degradation I (aerobic)
C2I28_19845	PWY-5109	2-methylbutanoate biosynthesis
C2I28_19845	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
C2I28_19845	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
C2I28_19845	PWY-5177	glutaryl-CoA degradation
C2I28_19845	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
C2I28_19845	PWY-6435	4-hydroxybenzoate biosynthesis V
C2I28_19845	PWY-6583	pyruvate fermentation to butanol I
C2I28_19845	PWY-6863	pyruvate fermentation to hexanol
C2I28_19845	PWY-6883	pyruvate fermentation to butanol II
C2I28_19845	PWY-6944	androstenedione degradation
C2I28_19845	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
C2I28_19845	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
C2I28_19845	PWY-7007	methyl ketone biosynthesis
C2I28_19845	PWY-7046	4-coumarate degradation (anaerobic)
C2I28_19845	PWY-7094	fatty acid salvage
C2I28_19845	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
C2I28_19845	PWY-735	jasmonic acid biosynthesis
C2I28_19845	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
C2I28_19845	PWY-7606	docosahexaenoate biosynthesis III (mammals)
C2I28_19845	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
C2I28_19845	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
C2I28_19845	PWY-7726	C2I28_19845
C2I28_19845	PWY-7778	C2I28_19845
C2I28_19845	PWY-7779	C2I28_19845
C2I28_19890	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
C2I28_20110	PWY-7431	aromatic biogenic amine degradation (bacteria)
C2I28_20250	PWY-5971	palmitate biosynthesis II (bacteria and plants)
C2I28_20250	PWY-5973	<i>cis</i>-vaccenate biosynthesis
C2I28_20250	PWY-5989	stearate biosynthesis II (bacteria and plants)
C2I28_20250	PWY-5994	palmitate biosynthesis I (animals and fungi)
C2I28_20250	PWY-6113	superpathway of mycolate biosynthesis
C2I28_20250	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
C2I28_20250	PWY-6519	8-amino-7-oxononanoate biosynthesis I
C2I28_20250	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
C2I28_20250	PWY-7663	gondoate biosynthesis (anaerobic)
C2I28_20250	PWY-7664	oleate biosynthesis IV (anaerobic)
C2I28_20250	PWY-7858	C2I28_20250
C2I28_20250	PWYG-321	mycolate biosynthesis
C2I28_20325	PWY-4321	L-glutamate degradation IV
C2I28_20415	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
C2I28_20415	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
C2I28_20440	PWY-4041	&gamma;-glutamyl cycle
C2I28_20440	PWY-7942	C2I28_20440
C2I28_20455	PWY-4041	&gamma;-glutamyl cycle
C2I28_20455	PWY-7942	C2I28_20455
C2I28_20655	PWY-5101	L-isoleucine biosynthesis II
C2I28_20655	PWY-5103	L-isoleucine biosynthesis III
C2I28_20655	PWY-5104	L-isoleucine biosynthesis IV
C2I28_20655	PWY-7111	pyruvate fermentation to isobutanol (engineered)
C2I28_20665	PWY-7805	C2I28_20665
C2I28_20665	PWY-7807	C2I28_20665
C2I28_20685	PWY-5057	L-valine degradation II
C2I28_20685	PWY-5076	L-leucine degradation III
C2I28_20685	PWY-5078	L-isoleucine degradation II
C2I28_20685	PWY-5101	L-isoleucine biosynthesis II
C2I28_20685	PWY-5103	L-isoleucine biosynthesis III
C2I28_20685	PWY-5104	L-isoleucine biosynthesis IV
C2I28_20685	PWY-5108	L-isoleucine biosynthesis V
C2I28_20685	PWY-7767	C2I28_20685
C2I28_20695	PWY-5667	CDP-diacylglycerol biosynthesis I
C2I28_20695	PWY-5981	CDP-diacylglycerol biosynthesis III
C2I28_20695	PWY-6453	stigma estolide biosynthesis
C2I28_20695	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
C2I28_20695	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
C2I28_20695	PWY-7587	oleate biosynthesis III (cyanobacteria)
C2I28_20695	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
C2I28_20695	PWY-7782	C2I28_20695
C2I28_20705	PWY-5691	urate degradation to allantoin I
C2I28_20705	PWY-7394	urate degradation to allantoin II
C2I28_20705	PWY-7849	C2I28_20705
C2I28_20710	PWY-5691	urate degradation to allantoin I
C2I28_20710	PWY-7394	urate degradation to allantoin II
C2I28_20710	PWY-7849	C2I28_20710
C2I28_21000	PWY-7824	C2I28_21000
C2I28_21025	PWY-5669	phosphatidylethanolamine biosynthesis I
C2I28_21110	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
C2I28_21110	PWY-5743	3-hydroxypropanoate cycle
C2I28_21110	PWY-5744	glyoxylate assimilation
C2I28_21110	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
C2I28_21110	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
C2I28_21110	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
C2I28_21110	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
C2I28_21165	PWY-5194	siroheme biosynthesis
C2I28_21165	PWY-5196	factor 430 biosynthesis
C2I28_21165	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
C2I28_21175	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
C2I28_21180	PWY-5194	siroheme biosynthesis
C2I28_21180	PWY-5196	factor 430 biosynthesis
C2I28_21180	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
C2I28_21190	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
C2I28_21195	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
C2I28_21210	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
C2I28_21215	PWY-6683	sulfate reduction III (assimilatory)
C2I28_21310	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
C2I28_21310	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
C2I28_21310	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
C2I28_21310	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
C2I28_21310	PWY-6978	plastoquinol-9 biosynthesis II
C2I28_21330	PWY-7511	protein ubiquitylation
C2I28_21715	PWY-6854	ethylene biosynthesis III (microbes)
C2I28_21805	PWY-7254	TCA cycle VII (acetate-producers)
C2I28_22090	PWY-6556	pyrimidine ribonucleosides salvage II
C2I28_22090	PWY-7181	pyrimidine deoxyribonucleosides degradation
C2I28_22090	PWY-7193	pyrimidine ribonucleosides salvage I
C2I28_22090	PWY-7199	pyrimidine deoxyribonucleosides salvage
C2I28_22095	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
C2I28_22100	PWY-7181	pyrimidine deoxyribonucleosides degradation
C2I28_22405	PWY-7254	TCA cycle VII (acetate-producers)
C2I28_22475	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
C2I28_22475	PWY-7118	chitin degradation to ethanol
C2I28_22475	PWY-7294	xylose degradation IV
C2I28_22475	PWY-7295	L-arabinose degradation IV
C2I28_22475	PWY-7854	C2I28_22475
C2I28_22595	PWY-6834	spermidine biosynthesis III
C2I28_22650	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
C2I28_22655	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
C2I28_22705	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_22705	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
C2I28_22705	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
C2I28_22705	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_22865	PWY-5686	UMP biosynthesis
C2I28_22865	PWY-7790	C2I28_22865
C2I28_22865	PWY-7791	C2I28_22865
C2I28_22875	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
C2I28_22875	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
C2I28_22875	PWY-7242	D-fructuronate degradation
C2I28_22875	PWY-7310	D-glucosaminate degradation
C2I28_22875	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
C2I28_22950	PWY-5704	urea degradation II
C2I28_22955	PWY-5704	urea degradation II
C2I28_22960	PWY-5704	urea degradation II
C2I28_23005	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_23005	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
C2I28_23005	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
C2I28_23005	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_23125	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
C2I28_23130	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
C2I28_23135	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
C2I28_23140	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
C2I28_23140	PWY-3461	L-tyrosine biosynthesis II
C2I28_23140	PWY-3462	L-phenylalanine biosynthesis II
C2I28_23140	PWY-6120	L-tyrosine biosynthesis III
C2I28_23140	PWY-6164	3-dehydroquinate biosynthesis I
C2I28_23140	PWY-6627	salinosporamide A biosynthesis
C2I28_23140	PWY-7626	bacilysin biosynthesis
C2I28_23140	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
C2I28_23160	PWY-4041	&gamma;-glutamyl cycle
C2I28_23160	PWY-4061	glutathione-mediated detoxification I
C2I28_23160	PWY-5826	hypoglycin biosynthesis
C2I28_23160	PWY-6842	glutathione-mediated detoxification II
C2I28_23160	PWY-7112	4-hydroxy-2-nonenal detoxification
C2I28_23160	PWY-7559	glutathione degradation (DUG pathway - yeast)
C2I28_23165	PWY-6832	2-aminoethylphosphonate degradation II
C2I28_23285	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_23285	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
C2I28_23285	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
C2I28_23285	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_23325	PWY-7883	C2I28_23325
C2I28_23355	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
C2I28_23355	PWY-6269	adenosylcobalamin salvage from cobinamide II
C2I28_23355	PWY-7964	C2I28_23355
C2I28_23355	PWY-7965	C2I28_23355
C2I28_23355	PWY-7966	C2I28_23355
C2I28_23355	PWY-7967	C2I28_23355
C2I28_23355	PWY-7968	C2I28_23355
C2I28_23355	PWY-7969	C2I28_23355
C2I28_23355	PWY-7970	C2I28_23355
C2I28_23485	PWY-5392	reductive TCA cycle II
C2I28_23485	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
C2I28_23485	PWY-5690	TCA cycle II (plants and fungi)
C2I28_23485	PWY-5913	TCA cycle VI (obligate autotrophs)
C2I28_23485	PWY-6728	methylaspartate cycle
C2I28_23485	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
C2I28_23485	PWY-7254	TCA cycle VII (acetate-producers)
C2I28_23485	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
C2I28_23590	PWY-6683	sulfate reduction III (assimilatory)
C2I28_23595	PWY-6683	sulfate reduction III (assimilatory)
C2I28_23710	PWY-5028	L-histidine degradation II
C2I28_23710	PWY-5030	L-histidine degradation III
C2I28_23735	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
C2I28_23755	PWY-3781	aerobic respiration I (cytochrome c)
C2I28_23755	PWY-4521	arsenite oxidation I (respiratory)
C2I28_23755	PWY-6692	Fe(II) oxidation
C2I28_23755	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
C2I28_24145	PWY-5451	acetone degradation I (to methylglyoxal)
C2I28_24145	PWY-5665	vanillin biosynthesis I
C2I28_24145	PWY-6398	melatonin degradation I
C2I28_24145	PWY-6992	1,5-anhydrofructose degradation
C2I28_24145	PWY-7466	acetone degradation III (to propane-1,2-diol)
C2I28_24145	PWY-7826	C2I28_24145
C2I28_24230	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_24230	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
C2I28_24230	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
C2I28_24230	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_24240	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
C2I28_24240	PWY-5723	Rubisco shunt
C2I28_24250	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
C2I28_24250	PWY-5723	Rubisco shunt
C2I28_24250	PWY-6891	thiazole biosynthesis II (Bacillus)
C2I28_24250	PWY-6892	thiazole biosynthesis I (E. coli)
C2I28_24250	PWY-6901	superpathway of glucose and xylose degradation
C2I28_24250	PWY-7560	methylerythritol phosphate pathway II
C2I28_24255	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
C2I28_24280	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
C2I28_24500	PWY-4041	&gamma;-glutamyl cycle
C2I28_24500	PWY-4061	glutathione-mediated detoxification I
C2I28_24500	PWY-5826	hypoglycin biosynthesis
C2I28_24500	PWY-6842	glutathione-mediated detoxification II
C2I28_24500	PWY-7112	4-hydroxy-2-nonenal detoxification
C2I28_24500	PWY-7559	glutathione degradation (DUG pathway - yeast)
C2I28_24505	PWY-6303	methyl indole-3-acetate interconversion
C2I28_24505	PWY-6857	retinol biosynthesis
C2I28_24655	PWY-5971	palmitate biosynthesis II (bacteria and plants)
C2I28_24655	PWY-5973	<i>cis</i>-vaccenate biosynthesis
C2I28_24655	PWY-5989	stearate biosynthesis II (bacteria and plants)
C2I28_24655	PWY-6113	superpathway of mycolate biosynthesis
C2I28_24655	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
C2I28_24655	PWY-6519	8-amino-7-oxononanoate biosynthesis I
C2I28_24655	PWY-7663	gondoate biosynthesis (anaerobic)
C2I28_24655	PWY-7664	oleate biosynthesis IV (anaerobic)
C2I28_24655	PWY-7858	C2I28_24655
C2I28_24655	PWYG-321	mycolate biosynthesis
C2I28_24915	PWY-5484	glycolysis II (from fructose 6-phosphate)
C2I28_25055	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
C2I28_25055	PWY-7248	pectin degradation III
C2I28_25115	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_25115	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
C2I28_25115	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
C2I28_25115	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_25545	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
C2I28_25545	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
C2I28_25545	PWY-6936	seleno-amino acid biosynthesis
C2I28_25545	PWY-702	L-methionine biosynthesis II
C2I28_25725	PWY-5101	L-isoleucine biosynthesis II
C2I28_25725	PWY-5103	L-isoleucine biosynthesis III
C2I28_25725	PWY-5104	L-isoleucine biosynthesis IV
C2I28_25725	PWY-6760	xylose degradation III
C2I28_25725	PWY-7111	pyruvate fermentation to isobutanol (engineered)
C2I28_25725	PWY-7178	ethylene glycol biosynthesis
C2I28_25725	PWY-7294	xylose degradation IV
C2I28_25730	PWY-2941	L-lysine biosynthesis II
C2I28_25730	PWY-2942	L-lysine biosynthesis III
C2I28_25730	PWY-5097	L-lysine biosynthesis VI
C2I28_25990	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
C2I28_25990	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
C2I28_25990	PWY-7242	D-fructuronate degradation
C2I28_25990	PWY-7310	D-glucosaminate degradation
C2I28_25990	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
C2I28_26055	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
C2I28_26055	PWY-5723	Rubisco shunt
C2I28_26180	PWY-5098	chlorophyll <i>a</i> degradation I
C2I28_26180	PWY-6927	chlorophyll <i>a</i> degradation II
C2I28_26180	PWY-7164	chlorophyll <i>a</i> degradation III
C2I28_26465	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
C2I28_26500	PWY-6012	acyl carrier protein metabolism I
C2I28_26500	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
C2I28_26500	PWY-6289	petrobactin biosynthesis
C2I28_26520	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
C2I28_26520	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
C2I28_26520	PWY-7717	C2I28_26520
C2I28_26520	PWY-7733	C2I28_26520
C2I28_26520	PWY-7734	C2I28_26520
C2I28_26520	PWY-7765	C2I28_26520
C2I28_26550	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_26550	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
C2I28_26550	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
C2I28_26550	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_26580	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
C2I28_26580	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
C2I28_26580	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
C2I28_26580	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
C2I28_26755	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
C2I28_26755	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
C2I28_26755	PWY-7242	D-fructuronate degradation
C2I28_26755	PWY-7310	D-glucosaminate degradation
C2I28_26755	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
C2I28_26760	PWY-7310	D-glucosaminate degradation
