C2I28_00055 SM00530 Helix-turn-helix XRE-family like proteins C2I28_00065 SM00344 helix_turn_helix ASNC type C2I28_00200 SM00640 Glycosyl hydrolases family 32 C2I28_00205 SM00642 Alpha-amylase domain C2I28_00210 SM00354 helix_turn _helix lactose operon repressor C2I28_00295 SM00870 C2I28_00295 C2I28_00310 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C2I28_00310 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C2I28_00330 SM00014 Acid phosphatase homologues C2I28_00335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_00335 SM00387 Histidine kinase-like ATPases C2I28_00335 SM00388 His Kinase A (phosphoacceptor) domain C2I28_00340 SM00448 cheY-homologous receiver domain C2I28_00340 SM00862 Transcriptional regulatory protein, C terminal C2I28_00345 SM00448 cheY-homologous receiver domain C2I28_00345 SM00862 Transcriptional regulatory protein, C terminal C2I28_00400 SM01266 C2I28_00400 C2I28_00410 SM00530 Helix-turn-helix XRE-family like proteins C2I28_00495 SM00248 ankyrin repeats C2I28_00510 SM00530 Helix-turn-helix XRE-family like proteins C2I28_00520 SM00342 helix_turn_helix, arabinose operon control protein C2I28_00520 SM00871 Bacterial transcription activator, effector binding domain C2I28_00555 SM00852 Probable molybdopterin binding domain C2I28_00565 SM00852 Probable molybdopterin binding domain C2I28_00585 SM00382 ATPases associated with a variety of cellular activities C2I28_00680 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_00705 SM00357 Cold shock protein domain C2I28_00760 SM00052 Putative diguanylate phosphodiesterase C2I28_00760 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2I28_00760 SM00267 diguanylate cyclase C2I28_00790 SM00966 SpoVT / AbrB like domain C2I28_00845 SM00422 helix_turn_helix, mercury resistance C2I28_00860 SM00422 helix_turn_helix, mercury resistance C2I28_00875 SM00640 Glycosyl hydrolases family 32 C2I28_00915 SM00382 ATPases associated with a variety of cellular activities C2I28_00925 SM00387 Histidine kinase-like ATPases C2I28_00925 SM00388 His Kinase A (phosphoacceptor) domain C2I28_00930 SM00448 cheY-homologous receiver domain C2I28_00930 SM00862 Transcriptional regulatory protein, C terminal C2I28_00995 SM00984 UDP binding domain C2I28_01020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2I28_01025 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_01115 SM00344 helix_turn_helix ASNC type C2I28_01125 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C2I28_01130 SM00448 cheY-homologous receiver domain C2I28_01130 SM00862 Transcriptional regulatory protein, C terminal C2I28_01135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_01135 SM00387 Histidine kinase-like ATPases C2I28_01135 SM00388 His Kinase A (phosphoacceptor) domain C2I28_01150 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_01150 SM00895 C2I28_01150 C2I28_01200 SM00382 ATPases associated with a variety of cellular activities C2I28_01245 SM00354 helix_turn _helix lactose operon repressor C2I28_01250 SM00387 Histidine kinase-like ATPases C2I28_01250 SM00388 His Kinase A (phosphoacceptor) domain C2I28_01275 SM01060 C2I28_01275 C2I28_01395 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_01470 SM00849 Metallo-beta-lactamase superfamily C2I28_01510 SM00257 Lysin motif C2I28_01515 SM00116 Domain in cystathionine beta-synthase and other proteins. C2I28_01515 SM01091 Transporter associated domain C2I28_01585 SM00382 ATPases associated with a variety of cellular activities C2I28_01590 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_01625 SM00382 ATPases associated with a variety of cellular activities C2I28_01655 SM01061 CAT RNA binding domain C2I28_01705 SM00014 Acid phosphatase homologues C2I28_01715 SM00219 Tyrosine kinase, catalytic domain C2I28_01770 SM00882 Coenzyme A transferase C2I28_01775 SM00882 Coenzyme A transferase C2I28_01795 SM00091 PAS domain C2I28_01795 SM00387 Histidine kinase-like ATPases C2I28_01795 SM00388 His Kinase A (phosphoacceptor) domain C2I28_01830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_01830 SM00387 Histidine kinase-like ATPases C2I28_01830 SM00388 His Kinase A (phosphoacceptor) domain C2I28_01885 SM01006 Siderophore biosynthesis protein domain C2I28_01920 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2I28_01920 SM00091 PAS domain C2I28_01920 SM00387 Histidine kinase-like ATPases C2I28_01920 SM00388 His Kinase A (phosphoacceptor) domain C2I28_01940 SM00091 PAS domain C2I28_01940 SM00382 ATPases associated with a variety of cellular activities C2I28_01975 SM00382 ATPases associated with a variety of cellular activities C2I28_01980 SM00382 ATPases associated with a variety of cellular activities C2I28_01995 SM00861 Transketolase, pyrimidine binding domain C2I28_02005 SM00857 Resolvase, N terminal domain C2I28_02055 SM00257 Lysin motif C2I28_02055 SM00646 C2I28_02055 C2I28_02060 SM01230 C2I28_02060 C2I28_02065 SM00422 helix_turn_helix, mercury resistance C2I28_02085 SM00382 ATPases associated with a variety of cellular activities C2I28_02100 SM00853 MutL C terminal dimerisation domain C2I28_02100 SM01340 C2I28_02100 C2I28_02105 SM00533 DNA-binding domain of DNA mismatch repair MUTS family C2I28_02105 SM00534 ATPase domain of DNA mismatch repair MUTS family C2I28_02125 SM00729 Elongator protein 3, MiaB family, Radical SAM C2I28_02155 SM00322 K homology RNA-binding domain C2I28_02155 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2I28_02160 SM00382 ATPases associated with a variety of cellular activities C2I28_02165 SM00852 Probable molybdopterin binding domain C2I28_02175 SM00530 Helix-turn-helix XRE-family like proteins C2I28_02215 SM00382 ATPases associated with a variety of cellular activities C2I28_02225 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_02225 SM00866 C2I28_02225 C2I28_02230 SM00382 ATPases associated with a variety of cellular activities C2I28_02230 SM00843 C2I28_02230 C2I28_02245 SM00849 Metallo-beta-lactamase superfamily C2I28_02250 SM01130 C2I28_02250 C2I28_02260 SM00859 Semialdehyde dehydrogenase, NAD binding domain C2I28_02290 SM00316 Ribosomal protein S1-like RNA-binding domain C2I28_02290 SM00322 K homology RNA-binding domain C2I28_02295 SM01387 C2I28_02295 C2I28_02300 SM00904 Riboflavin kinase C2I28_02335 SM00316 Ribosomal protein S1-like RNA-binding domain C2I28_02335 SM00322 K homology RNA-binding domain C2I28_02345 SM00479 C2I28_02345 C2I28_02345 SM00481 DNA polymerase alpha chain like domain C2I28_02355 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C2I28_02410 SM00260 Two component signalling adaptor domain C2I28_02415 SM00073 Histidine Phosphotransfer domain C2I28_02415 SM00260 Two component signalling adaptor domain C2I28_02415 SM00387 Histidine kinase-like ATPases C2I28_02415 SM01231 C2I28_02415 C2I28_02420 SM00448 cheY-homologous receiver domain C2I28_02430 SM00382 ATPases associated with a variety of cellular activities C2I28_02430 SM00962 SRP54-type protein, GTPase domain C2I28_02465 SM00448 cheY-homologous receiver domain C2I28_02515 SM00382 ATPases associated with a variety of cellular activities C2I28_02555 SM00382 ATPases associated with a variety of cellular activities C2I28_02555 SM01086 C-terminal, D2-small domain, of ClpB protein C2I28_02575 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C2I28_02575 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C2I28_02575 SM00493 C2I28_02575 C2I28_02585 SM00881 CoA binding domain C2I28_02640 SM00382 ATPases associated with a variety of cellular activities C2I28_02640 SM00962 SRP54-type protein, GTPase domain C2I28_02640 SM00963 SRP54-type protein, helical bundle domain C2I28_02650 SM00382 ATPases associated with a variety of cellular activities C2I28_02650 SM00962 SRP54-type protein, GTPase domain C2I28_02650 SM00963 SRP54-type protein, helical bundle domain C2I28_02655 SM00968 SMC proteins Flexible Hinge Domain C2I28_02660 SM00358 Double-stranded RNA binding motif C2I28_02660 SM00535 Ribonuclease III family C2I28_02670 SM00822 C2I28_02670 C2I28_02675 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. C2I28_02690 SM00487 DEAD-like helicases superfamily C2I28_02690 SM00490 helicase superfamily c-terminal domain C2I28_02710 SM01120 C2I28_02710 C2I28_02710 SM01121 C2I28_02710 C2I28_02730 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain C2I28_02745 SM00220 Serine/Threonine protein kinases, catalytic domain C2I28_02745 SM00740 C2I28_02745 C2I28_02750 SM00331 Sigma factor PP2C-like phosphatases C2I28_02750 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain C2I28_02775 SM00487 DEAD-like helicases superfamily C2I28_02775 SM00490 helicase superfamily c-terminal domain C2I28_02785 SM01409 C2I28_02785 C2I28_02790 SM00072 Guanylate kinase homologues. C2I28_02805 SM00831 Cation transporter/ATPase, N-terminus C2I28_02820 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C2I28_02835 SM00851 MGS-like domain C2I28_02835 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C2I28_02835 SM01209 C2I28_02835 C2I28_02840 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain C2I28_02865 SM00363 S4 RNA-binding domain C2I28_02890 SM00363 S4 RNA-binding domain C2I28_02935 SM00864 Tubulin/FtsZ family, GTPase domain C2I28_02935 SM00865 Tubulin/FtsZ family, C-terminal domain C2I28_02940 SM00842 Cell division protein FtsA C2I28_02975 SM00740 C2I28_02975 C2I28_02980 SM00740 C2I28_02980 C2I28_03020 SM00878 Biotin carboxylase C-terminal domain C2I28_03055 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C2I28_03140 SM00914 C2I28_03140 C2I28_03145 SM00028 Tetratricopeptide repeats C2I28_03205 SM00138 Methyltransferase, chemotaxis proteins C2I28_03210 SM00562 C2I28_03210 C2I28_03240 SM00411 bacterial (prokaryotic) histone like domain C2I28_03285 SM01240 C2I28_03285 C2I28_03290 SM00316 Ribosomal protein S1-like RNA-binding domain C2I28_03295 SM00563 Phosphate acyltransferases C2I28_03325 SM00870 C2I28_03325 C2I28_03335 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C2I28_03345 SM00422 helix_turn_helix, mercury resistance C2I28_03370 SM00487 DEAD-like helicases superfamily C2I28_03370 SM00490 helicase superfamily c-terminal domain C2I28_03395 SM00257 Lysin motif C2I28_03400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_03400 SM00387 Histidine kinase-like ATPases C2I28_03400 SM00388 His Kinase A (phosphoacceptor) domain C2I28_03405 SM00448 cheY-homologous receiver domain C2I28_03405 SM00862 Transcriptional regulatory protein, C terminal C2I28_03425 SM00363 S4 RNA-binding domain C2I28_03525 SM00387 Histidine kinase-like ATPases C2I28_03535 SM00936 Penicillin-binding protein 5, C-terminal domain C2I28_03590 SM00882 Coenzyme A transferase C2I28_03595 SM00882 Coenzyme A transferase C2I28_03620 SM00704 CDGSH-type zinc finger. Function unknown. C2I28_03630 SM00849 Metallo-beta-lactamase superfamily C2I28_03715 SM00382 ATPases associated with a variety of cellular activities C2I28_03725 SM00062 Bacterial periplasmic substrate-binding proteins C2I28_03725 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C2I28_03755 SM00861 Transketolase, pyrimidine binding domain C2I28_03775 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C2I28_03785 SM00091 PAS domain C2I28_03785 SM00382 ATPases associated with a variety of cellular activities C2I28_03810 SM00448 cheY-homologous receiver domain C2I28_03815 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C2I28_03830 SM00363 S4 RNA-binding domain C2I28_03835 SM00861 Transketolase, pyrimidine binding domain C2I28_03865 SM00878 Biotin carboxylase C-terminal domain C2I28_03910 SM00382 ATPases associated with a variety of cellular activities C2I28_03920 SM00841 Elongation factor P, C-terminal C2I28_03920 SM01185 C2I28_03920 C2I28_03955 SM00529 Helix-turn-helix diphteria tox regulatory element C2I28_03970 SM00450 Rhodanese Homology Domain C2I28_03990 SM00487 DEAD-like helicases superfamily C2I28_03990 SM00490 helicase superfamily c-terminal domain C2I28_04035 SM00382 ATPases associated with a variety of cellular activities C2I28_04050 SM00849 Metallo-beta-lactamase superfamily C2I28_04060 SM00631 C2I28_04060 C2I28_04075 SM00028 Tetratricopeptide repeats C2I28_04115 SM00382 ATPases associated with a variety of cellular activities C2I28_04210 SM00382 ATPases associated with a variety of cellular activities C2I28_04220 SM00518 AP endonuclease family 2 C2I28_04225 SM00487 DEAD-like helicases superfamily C2I28_04225 SM00490 helicase superfamily c-terminal domain C2I28_04265 SM00400 zinc finger C2I28_04265 SM00493 C2I28_04265 C2I28_04280 SM00116 Domain in cystathionine beta-synthase and other proteins. C2I28_04315 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2I28_04320 SM00322 K homology RNA-binding domain C2I28_04340 SM00244 prohibitin homologues C2I28_04360 SM00729 Elongator protein 3, MiaB family, Radical SAM C2I28_04375 SM00271 DnaJ molecular chaperone homology domain C2I28_04395 SM00729 Elongator protein 3, MiaB family, Radical SAM C2I28_04400 SM00838 Elongation factor G C-terminus C2I28_04430 SM00849 Metallo-beta-lactamase superfamily C2I28_04440 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C2I28_04460 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2I28_04470 SM01103 C2I28_04470 C2I28_04565 SM00382 ATPases associated with a variety of cellular activities C2I28_04595 SM00732 Likely ribonuclease with RNase H fold. C2I28_04605 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C2I28_04625 SM00382 ATPases associated with a variety of cellular activities C2I28_04630 SM00028 Tetratricopeptide repeats C2I28_04650 SM00382 ATPases associated with a variety of cellular activities C2I28_04695 SM00287 Bacterial SH3 domain homologues C2I28_04695 SM00646 C2I28_04695 C2I28_04705 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2I28_04705 SM00954 Region found in RelA / SpoT proteins C2I28_04745 SM01323 C2I28_04745 C2I28_04765 SM00382 ATPases associated with a variety of cellular activities C2I28_04770 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C2I28_04795 SM00257 Lysin motif C2I28_04840 SM01317 C2I28_04840 C2I28_04860 SM00316 Ribosomal protein S1-like RNA-binding domain C2I28_04950 SM00257 Lysin motif C2I28_04960 SM01004 Delta-aminolevulinic acid dehydratase C2I28_04995 SM00382 ATPases associated with a variety of cellular activities C2I28_04995 SM00464 Found in ATP-dependent protease La (LON) C2I28_05000 SM00382 ATPases associated with a variety of cellular activities C2I28_05005 SM00382 ATPases associated with a variety of cellular activities C2I28_05005 SM00994 ClpX C4-type zinc finger C2I28_05005 SM01086 C-terminal, D2-small domain, of ClpB protein C2I28_05030 SM01329 C2I28_05030 C2I28_05035 SM00917 LeuA allosteric (dimerisation) domain C2I28_05075 SM00909 Sporulation and spore germination C2I28_05085 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_05130 SM00062 Bacterial periplasmic substrate-binding proteins C2I28_05135 SM00382 ATPases associated with a variety of cellular activities C2I28_05155 SM00421 helix_turn_helix, Lux Regulon C2I28_05190 SM00465 GIY-YIG type nucleases (URI domain) C2I28_05205 SM00893 Electron transfer flavoprotein domain C2I28_05210 SM00893 Electron transfer flavoprotein domain C2I28_05240 SM00463 Small MutS-related domain C2I28_05240 SM00533 DNA-binding domain of DNA mismatch repair MUTS family C2I28_05240 SM00534 ATPase domain of DNA mismatch repair MUTS family C2I28_05245 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C2I28_05245 SM00481 DNA polymerase alpha chain like domain C2I28_05245 SM00483 DNA polymerase X family C2I28_05265 SM00873 B3/4 domain C2I28_05265 SM00874 tRNA synthetase B5 domain C2I28_05265 SM00896 Ferredoxin-fold anticodon binding domain C2I28_05275 SM00967 RNA 2'-O ribose methyltransferase substrate binding C2I28_05320 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C2I28_05355 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2I28_05370 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain C2I28_05370 SM01232 C2I28_05370 C2I28_05375 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C2I28_05375 SM00474 3'-5' exonuclease C2I28_05375 SM00475 5'-3' exonuclease C2I28_05375 SM00482 DNA polymerase A domain C2I28_05380 SM00091 PAS domain C2I28_05380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_05380 SM00387 Histidine kinase-like ATPases C2I28_05380 SM00388 His Kinase A (phosphoacceptor) domain C2I28_05385 SM00448 cheY-homologous receiver domain C2I28_05385 SM00862 Transcriptional regulatory protein, C terminal C2I28_05400 SM01329 C2I28_05400 C2I28_05440 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_05445 SM00919 Malic enzyme, NAD binding domain C2I28_05445 SM01274 C2I28_05445 C2I28_05450 SM00481 DNA polymerase alpha chain like domain C2I28_05475 SM00116 Domain in cystathionine beta-synthase and other proteins. C2I28_05485 SM00849 Metallo-beta-lactamase superfamily C2I28_05490 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C2I28_05490 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C2I28_05565 SM00981 C2I28_05565 C2I28_05595 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2I28_05600 SM00363 S4 RNA-binding domain C2I28_05600 SM01390 C2I28_05600 C2I28_05605 SM00363 S4 RNA-binding domain C2I28_05620 SM00116 Domain in cystathionine beta-synthase and other proteins. C2I28_05640 SM00354 helix_turn _helix lactose operon repressor C2I28_05645 SM00830 Chorismate mutase type II C2I28_05680 SM00382 ATPases associated with a variety of cellular activities C2I28_05680 SM00843 C2I28_05680 C2I28_05715 SM00849 Metallo-beta-lactamase superfamily C2I28_05735 SM00642 Alpha-amylase domain C2I28_05765 SM00420 helix_turn_helix, Deoxyribose operon repressor C2I28_05770 SM00363 S4 RNA-binding domain C2I28_05790 SM00450 Rhodanese Homology Domain C2I28_05820 SM00729 Elongator protein 3, MiaB family, Radical SAM C2I28_05845 SM00014 Acid phosphatase homologues C2I28_05880 SM00382 ATPases associated with a variety of cellular activities C2I28_05915 SM01234 C2I28_05915 C2I28_05920 SM00947 Carbonic anhydrase C2I28_05925 SM00833 Cobalamin synthesis protein cobW C-terminal domain C2I28_05985 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C2I28_06045 SM00642 Alpha-amylase domain C2I28_06290 SM00316 Ribosomal protein S1-like RNA-binding domain C2I28_06300 SM00344 helix_turn_helix ASNC type C2I28_06325 SM01298 C2I28_06325 C2I28_06330 SM00479 C2I28_06330 C2I28_06345 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2I28_06480 SM00729 Elongator protein 3, MiaB family, Radical SAM C2I28_06535 SM00382 ATPases associated with a variety of cellular activities C2I28_06555 SM00382 ATPases associated with a variety of cellular activities C2I28_06555 SM00930 C2I28_06555 C2I28_06565 SM00493 C2I28_06565 C2I28_06620 SM00382 ATPases associated with a variety of cellular activities C2I28_06690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_06690 SM00387 Histidine kinase-like ATPases C2I28_06690 SM00388 His Kinase A (phosphoacceptor) domain C2I28_06695 SM00448 cheY-homologous receiver domain C2I28_06695 SM00862 Transcriptional regulatory protein, C terminal C2I28_06705 SM00014 Acid phosphatase homologues C2I28_06710 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_06735 SM00852 Probable molybdopterin binding domain C2I28_06750 SM00729 Elongator protein 3, MiaB family, Radical SAM C2I28_06765 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C2I28_06765 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C2I28_06795 SM00316 Ribosomal protein S1-like RNA-binding domain C2I28_06795 SM00357 Cold shock protein domain C2I28_06795 SM00955 C2I28_06795 C2I28_06810 SM01192 C2I28_06810 C2I28_06810 SM01193 C2I28_06810 C2I28_06830 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2I28_06895 SM00028 Tetratricopeptide repeats C2I28_06980 SM00382 ATPases associated with a variety of cellular activities C2I28_06985 SM00487 DEAD-like helicases superfamily C2I28_06985 SM00490 helicase superfamily c-terminal domain C2I28_06990 SM00091 PAS domain C2I28_06990 SM00382 ATPases associated with a variety of cellular activities C2I28_07005 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C2I28_07010 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C2I28_07010 SM00245 tail specific protease C2I28_07025 SM00382 ATPases associated with a variety of cellular activities C2I28_07060 SM00957 SecA DEAD-like domain C2I28_07060 SM00958 SecA preprotein cross-linking domain C2I28_07160 SM00487 DEAD-like helicases superfamily C2I28_07160 SM00490 helicase superfamily c-terminal domain C2I28_07180 SM00421 helix_turn_helix, Lux Regulon C2I28_07180 SM00448 cheY-homologous receiver domain C2I28_07185 SM00387 Histidine kinase-like ATPases C2I28_07210 SM00244 prohibitin homologues C2I28_07220 SM00984 UDP binding domain C2I28_07235 SM00487 DEAD-like helicases superfamily C2I28_07235 SM00490 helicase superfamily c-terminal domain C2I28_07240 SM00257 Lysin motif C2I28_07255 SM00530 Helix-turn-helix XRE-family like proteins C2I28_07315 SM00382 ATPases associated with a variety of cellular activities C2I28_07390 SM00226 Low molecular weight phosphatase family C2I28_07420 SM00937 C2I28_07420 C2I28_07435 SM00357 Cold shock protein domain C2I28_07435 SM00382 ATPases associated with a variety of cellular activities C2I28_07435 SM00959 Rho termination factor, N-terminal domain C2I28_07455 SM00448 cheY-homologous receiver domain C2I28_07510 SM00155 Phospholipase D. Active site motifs. C2I28_07520 SM00836 DALR anticodon binding domain C2I28_07520 SM01016 Arginyl tRNA synthetase N terminal dom C2I28_07565 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2I28_07615 SM00986 Uracil DNA glycosylase superfamily C2I28_07615 SM00987 UreE urease accessory protein, C-terminal domain C2I28_07630 SM01350 C2I28_07630 C2I28_07640 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C2I28_07640 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C2I28_07715 SM00382 ATPases associated with a variety of cellular activities C2I28_07720 SM00382 ATPases associated with a variety of cellular activities C2I28_07745 SM00354 helix_turn _helix lactose operon repressor C2I28_07775 SM01060 C2I28_07775 C2I28_07785 SM00642 Alpha-amylase domain C2I28_07795 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase C2I28_07805 SM00448 cheY-homologous receiver domain C2I28_07805 SM00862 Transcriptional regulatory protein, C terminal C2I28_07810 SM00387 Histidine kinase-like ATPases C2I28_07810 SM00388 His Kinase A (phosphoacceptor) domain C2I28_07830 SM00487 DEAD-like helicases superfamily C2I28_07830 SM00490 helicase superfamily c-terminal domain C2I28_07850 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C2I28_07855 SM00849 Metallo-beta-lactamase superfamily C2I28_07870 SM00091 PAS domain C2I28_07870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_07870 SM00387 Histidine kinase-like ATPases C2I28_07870 SM00388 His Kinase A (phosphoacceptor) domain C2I28_07875 SM00448 cheY-homologous receiver domain C2I28_07875 SM00862 Transcriptional regulatory protein, C terminal C2I28_07900 SM00788 Adenylosuccinate synthetase C2I28_07915 SM00267 diguanylate cyclase C2I28_07965 SM00470 ParB-like nuclease domain C2I28_07975 SM00470 ParB-like nuclease domain C2I28_07985 SM01228 C2I28_07985 C2I28_07995 SM00393 Putative single-stranded nucleic acids-binding domain C2I28_07995 SM01245 C2I28_07995 C2I28_08015 SM00382 ATPases associated with a variety of cellular activities C2I28_08015 SM00760 Bacterial dnaA protein helix-turn-helix domain C2I28_08020 SM00480 DNA polymerase III beta subunit C2I28_08035 SM00387 Histidine kinase-like ATPases C2I28_08035 SM00433 TopoisomeraseII C2I28_08040 SM00434 DNA Topoisomerase IV C2I28_08075 SM00116 Domain in cystathionine beta-synthase and other proteins. C2I28_08075 SM01240 C2I28_08075 C2I28_08080 SM00936 Penicillin-binding protein 5, C-terminal domain C2I28_08115 SM00257 Lysin motif C2I28_08115 SM00636 C2I28_08115 C2I28_08135 SM00382 ATPases associated with a variety of cellular activities C2I28_08145 SM00493 C2I28_08145 C2I28_08295 SM00966 SpoVT / AbrB like domain C2I28_08310 SM00493 C2I28_08310 C2I28_08315 SM00650 Ribosomal RNA adenine dimethylases C2I28_08360 SM01400 C2I28_08360 C2I28_08380 SM00487 DEAD-like helicases superfamily C2I28_08380 SM00490 helicase superfamily c-terminal domain C2I28_08380 SM00982 C2I28_08380 C2I28_08380 SM01058 CarD-like/TRCF domain C2I28_08385 SM00966 SpoVT / AbrB like domain C2I28_08400 SM00363 S4 RNA-binding domain C2I28_08420 SM00316 Ribosomal protein S1-like RNA-binding domain C2I28_08435 SM00331 Sigma factor PP2C-like phosphatases C2I28_08435 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain C2I28_08445 SM00220 Serine/Threonine protein kinases, catalytic domain C2I28_08450 SM00977 TilS substrate C-terminal domain C2I28_08460 SM00382 ATPases associated with a variety of cellular activities C2I28_08495 SM00905 Dihydroneopterin aldolase C2I28_08540 SM00382 ATPases associated with a variety of cellular activities C2I28_08540 SM01086 C-terminal, D2-small domain, of ClpB protein C2I28_08545 SM00382 ATPases associated with a variety of cellular activities C2I28_08555 SM00670 Large family of predicted nucleotide-binding domains C2I28_08580 SM00840 C2I28_08580 C2I28_08585 SM00535 Ribonuclease III family C2I28_08590 SM00967 RNA 2'-O ribose methyltransferase substrate binding C2I28_08600 SM00421 helix_turn_helix, Lux Regulon C2I28_08615 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. C2I28_08615 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C2I28_08620 SM00649 Ribosomal protein L11/L12 C2I28_08650 SM00663 RNA polymerase I subunit A N-terminus C2I28_08670 SM00838 Elongation factor G C-terminus C2I28_08670 SM00889 Elongation factor G, domain IV C2I28_08680 SM01403 C2I28_08680 C2I28_08700 SM01382 C2I28_08700 C2I28_08700 SM01383 C2I28_08700 C2I28_08715 SM00322 K homology RNA-binding domain C2I28_08735 SM01374 C2I28_08735 C2I28_08740 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C2I28_08800 SM00316 Ribosomal protein S1-like RNA-binding domain C2I28_08820 SM00662 RNA polymerases D C2I28_08830 SM00382 ATPases associated with a variety of cellular activities C2I28_08835 SM00382 ATPases associated with a variety of cellular activities C2I28_08865 SM00646 C2I28_08865 C2I28_08885 SM01251 C2I28_08885 C2I28_09010 SM00287 Bacterial SH3 domain homologues C2I28_09050 SM00530 Helix-turn-helix XRE-family like proteins C2I28_09055 SM00382 ATPases associated with a variety of cellular activities C2I28_09080 SM00448 cheY-homologous receiver domain C2I28_09080 SM00862 Transcriptional regulatory protein, C terminal C2I28_09085 SM00387 Histidine kinase-like ATPases C2I28_09085 SM00388 His Kinase A (phosphoacceptor) domain C2I28_09100 SM00900 C2I28_09100 C2I28_09115 SM00487 DEAD-like helicases superfamily C2I28_09115 SM00490 helicase superfamily c-terminal domain C2I28_09140 SM01005 Alanine racemase, C-terminal domain C2I28_09165 SM00387 Histidine kinase-like ATPases C2I28_09170 SM00331 Sigma factor PP2C-like phosphatases C2I28_09190 SM00331 Sigma factor PP2C-like phosphatases C2I28_09195 SM00316 Ribosomal protein S1-like RNA-binding domain C2I28_09195 SM00732 Likely ribonuclease with RNase H fold. C2I28_09205 SM00731 SprT homologues. C2I28_09310 SM00382 ATPases associated with a variety of cellular activities C2I28_09315 SM00881 CoA binding domain C2I28_09340 SM00883 Chaperonin 10 Kd subunit C2I28_09360 SM00460 Transglutaminase/protease-like homologues C2I28_09425 SM01001 AIR carboxylase C2I28_09435 SM00998 Adenylosuccinate lyase C-terminus C2I28_09450 SM01211 C2I28_09450 C2I28_09475 SM00798 AICARFT/IMPCHase bienzyme C2I28_09475 SM00851 MGS-like domain C2I28_09480 SM01209 C2I28_09480 C2I28_09480 SM01210 C2I28_09480 C2I28_09515 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C2I28_09515 SM00292 breast cancer carboxy-terminal domain C2I28_09515 SM00532 Ligase N family C2I28_09540 SM00845 GatB domain C2I28_09545 SM00046 Diacylglycerol kinase catalytic domain (presumed) C2I28_09585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_09585 SM00387 Histidine kinase-like ATPases C2I28_09585 SM00388 His Kinase A (phosphoacceptor) domain C2I28_09605 SM00422 helix_turn_helix, mercury resistance C2I28_09625 SM00382 ATPases associated with a variety of cellular activities C2I28_09630 SM00062 Bacterial periplasmic substrate-binding proteins C2I28_09630 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C2I28_09665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_09665 SM00387 Histidine kinase-like ATPases C2I28_09665 SM00388 His Kinase A (phosphoacceptor) domain C2I28_09670 SM00448 cheY-homologous receiver domain C2I28_09670 SM00862 Transcriptional regulatory protein, C terminal C2I28_09675 SM00387 Histidine kinase-like ATPases C2I28_09675 SM00388 His Kinase A (phosphoacceptor) domain C2I28_09680 SM00448 cheY-homologous receiver domain C2I28_09680 SM00862 Transcriptional regulatory protein, C terminal C2I28_09695 SM00382 ATPases associated with a variety of cellular activities C2I28_09700 SM00014 Acid phosphatase homologues C2I28_09770 SM00091 PAS domain C2I28_09770 SM00387 Histidine kinase-like ATPases C2I28_09775 SM00448 cheY-homologous receiver domain C2I28_09790 SM00091 PAS domain C2I28_09790 SM00387 Histidine kinase-like ATPases C2I28_09790 SM00388 His Kinase A (phosphoacceptor) domain C2I28_09795 SM00487 DEAD-like helicases superfamily C2I28_09795 SM00490 helicase superfamily c-terminal domain C2I28_09855 SM01065 Starch binding domain C2I28_09875 SM00382 ATPases associated with a variety of cellular activities C2I28_09930 SM00226 Low molecular weight phosphatase family C2I28_09955 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2I28_10035 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2I28_10035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_10035 SM00387 Histidine kinase-like ATPases C2I28_10035 SM00388 His Kinase A (phosphoacceptor) domain C2I28_10065 SM00822 C2I28_10065 C2I28_10090 SM00478 endonuclease III C2I28_10090 SM00525 C2I28_10090 C2I28_10120 SM00382 ATPases associated with a variety of cellular activities C2I28_10135 SM00382 ATPases associated with a variety of cellular activities C2I28_10330 SM00873 B3/4 domain C2I28_10335 SM00567 E-Z type HEAT repeats C2I28_10350 SM00763 PrkA AAA domain C2I28_10445 SM00729 Elongator protein 3, MiaB family, Radical SAM C2I28_10445 SM00876 Biotin and Thiamin Synthesis associated domain C2I28_10455 SM00382 ATPases associated with a variety of cellular activities C2I28_10490 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C2I28_10535 SM00257 Lysin motif C2I28_10550 SM00287 Bacterial SH3 domain homologues C2I28_10560 SM00155 Phospholipase D. Active site motifs. C2I28_10585 SM00354 helix_turn _helix lactose operon repressor C2I28_10620 SM00354 helix_turn _helix lactose operon repressor C2I28_10640 SM00344 helix_turn_helix ASNC type C2I28_10670 SM00363 S4 RNA-binding domain C2I28_10690 SM00864 Tubulin/FtsZ family, GTPase domain C2I28_10690 SM00865 Tubulin/FtsZ family, C-terminal domain C2I28_10725 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain C2I28_10745 SM00829 Enoylreductase C2I28_10765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2I28_10765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_10855 SM00829 Enoylreductase C2I28_10865 SM00382 ATPases associated with a variety of cellular activities C2I28_10875 SM00062 Bacterial periplasmic substrate-binding proteins C2I28_10875 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C2I28_10925 SM00855 Phosphoglycerate mutase family C2I28_10940 SM00116 Domain in cystathionine beta-synthase and other proteins. C2I28_10940 SM01091 Transporter associated domain C2I28_10955 SM00382 ATPases associated with a variety of cellular activities C2I28_11000 SM00729 Elongator protein 3, MiaB family, Radical SAM C2I28_11015 SM00411 bacterial (prokaryotic) histone like domain C2I28_11025 SM00382 ATPases associated with a variety of cellular activities C2I28_11040 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2I28_11075 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_11115 SM00382 ATPases associated with a variety of cellular activities C2I28_11135 SM00014 Acid phosphatase homologues C2I28_11185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_11190 SM00342 helix_turn_helix, arabinose operon control protein C2I28_11190 SM00448 cheY-homologous receiver domain C2I28_11200 SM00849 Metallo-beta-lactamase superfamily C2I28_11340 SM00914 C2I28_11340 C2I28_11355 SM00822 C2I28_11355 C2I28_11450 SM00938 Nitrogen regulatory protein P-II C2I28_11460 SM00642 Alpha-amylase domain C2I28_11465 SM00354 helix_turn _helix lactose operon repressor C2I28_11490 SM00382 ATPases associated with a variety of cellular activities C2I28_11540 SM00100 Cyclic nucleotide-monophosphate binding domain C2I28_11540 SM00419 helix_turn_helix, cAMP Regulatory protein C2I28_11545 SM00859 Semialdehyde dehydrogenase, NAD binding domain C2I28_11565 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain C2I28_11570 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C2I28_11590 SM00382 ATPases associated with a variety of cellular activities C2I28_11590 SM01086 C-terminal, D2-small domain, of ClpB protein C2I28_11600 SM00342 helix_turn_helix, arabinose operon control protein C2I28_11650 SM00825 Beta-ketoacyl synthase C2I28_11660 SM00382 ATPases associated with a variety of cellular activities C2I28_11665 SM00382 ATPases associated with a variety of cellular activities C2I28_11715 SM00382 ATPases associated with a variety of cellular activities C2I28_11720 SM00382 ATPases associated with a variety of cellular activities C2I28_11770 SM00155 Phospholipase D. Active site motifs. C2I28_11805 SM01118 C2I28_11805 C2I28_11815 SM00954 Region found in RelA / SpoT proteins C2I28_11835 SM00116 Domain in cystathionine beta-synthase and other proteins. C2I28_11835 SM00924 MgtE intracellular N domain C2I28_11945 SM01350 C2I28_11945 C2I28_11975 SM00344 helix_turn_helix ASNC type C2I28_12000 SM00487 DEAD-like helicases superfamily C2I28_12000 SM00490 helicase superfamily c-terminal domain C2I28_12020 SM00849 Metallo-beta-lactamase superfamily C2I28_12055 SM00091 PAS domain C2I28_12055 SM00382 ATPases associated with a variety of cellular activities C2I28_12070 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2I28_12070 SM00387 Histidine kinase-like ATPases C2I28_12075 SM00448 cheY-homologous receiver domain C2I28_12075 SM00850 LytTr DNA-binding domain C2I28_12105 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C2I28_12155 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. C2I28_12185 SM00448 cheY-homologous receiver domain C2I28_12190 SM00387 Histidine kinase-like ATPases C2I28_12260 SM00382 ATPases associated with a variety of cellular activities C2I28_12280 SM00382 ATPases associated with a variety of cellular activities C2I28_12355 SM00091 PAS domain C2I28_12355 SM00387 Histidine kinase-like ATPases C2I28_12360 SM00448 cheY-homologous receiver domain C2I28_12395 SM00530 Helix-turn-helix XRE-family like proteins C2I28_12420 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_12450 SM00091 PAS domain C2I28_12450 SM00387 Histidine kinase-like ATPases C2I28_12455 SM00448 cheY-homologous receiver domain C2I28_12485 SM00116 Domain in cystathionine beta-synthase and other proteins. C2I28_12485 SM00382 ATPases associated with a variety of cellular activities C2I28_12565 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain C2I28_12565 SM01232 C2I28_12565 C2I28_12610 SM00382 ATPases associated with a variety of cellular activities C2I28_12635 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C2I28_12665 SM00899 C2I28_12665 C2I28_12690 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2I28_12695 SM00829 Enoylreductase C2I28_12700 SM00382 ATPases associated with a variety of cellular activities C2I28_12705 SM00382 ATPases associated with a variety of cellular activities C2I28_12730 SM00346 helix_turn_helix isocitrate lyase regulation C2I28_12750 SM00872 Alpha mannosidase, middle domain C2I28_12765 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_12790 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_12795 SM00354 helix_turn _helix lactose operon repressor C2I28_12810 SM00382 ATPases associated with a variety of cellular activities C2I28_12830 SM00903 Flavin reductase like domain C2I28_12860 SM00267 diguanylate cyclase C2I28_12860 SM00448 cheY-homologous receiver domain C2I28_12880 SM00448 cheY-homologous receiver domain C2I28_12885 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2I28_12885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_12885 SM00387 Histidine kinase-like ATPases C2I28_12885 SM00388 His Kinase A (phosphoacceptor) domain C2I28_12885 SM00448 cheY-homologous receiver domain C2I28_12900 SM00855 Phosphoglycerate mutase family C2I28_12950 SM00642 Alpha-amylase domain C2I28_12955 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_12955 SM00866 C2I28_12955 C2I28_12960 SM00796 Allophanate hydrolase subunit 1 C2I28_12965 SM00797 Allophanate hydrolase subunit 2 C2I28_13010 SM00829 Enoylreductase C2I28_13025 SM00796 Allophanate hydrolase subunit 1 C2I28_13025 SM00797 Allophanate hydrolase subunit 2 C2I28_13025 SM00878 Biotin carboxylase C-terminal domain C2I28_13055 SM00382 ATPases associated with a variety of cellular activities C2I28_13060 SM00357 Cold shock protein domain C2I28_13100 SM00267 diguanylate cyclase C2I28_13140 SM00854 Bacterial capsule synthesis protein PGA_cap C2I28_13365 SM00052 Putative diguanylate phosphodiesterase C2I28_13370 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2I28_13370 SM00091 PAS domain C2I28_13370 SM00267 diguanylate cyclase C2I28_13410 SM00387 Histidine kinase-like ATPases C2I28_13415 SM00448 cheY-homologous receiver domain C2I28_13440 SM00646 C2I28_13440 C2I28_13460 SM00914 C2I28_13460 C2I28_13470 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C2I28_13485 SM00382 ATPases associated with a variety of cellular activities C2I28_13515 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2I28_13550 SM00052 Putative diguanylate phosphodiesterase C2I28_13550 SM00267 diguanylate cyclase C2I28_13550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_13570 SM00052 Putative diguanylate phosphodiesterase C2I28_13570 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2I28_13570 SM00091 PAS domain C2I28_13570 SM00267 diguanylate cyclase C2I28_13625 SM00530 Helix-turn-helix XRE-family like proteins C2I28_13635 SM00710 Parallel beta-helix repeats C2I28_13700 SM00116 Domain in cystathionine beta-synthase and other proteins. C2I28_13775 SM00382 ATPases associated with a variety of cellular activities C2I28_13815 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_13815 SM00895 C2I28_13815 C2I28_13890 SM00465 GIY-YIG type nucleases (URI domain) C2I28_13900 SM00835 Cupin C2I28_13950 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_13950 SM00866 C2I28_13950 C2I28_14005 SM00382 ATPases associated with a variety of cellular activities C2I28_14010 SM01091 Transporter associated domain C2I28_14015 SM00422 helix_turn_helix, mercury resistance C2I28_14060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2I28_14060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_14115 SM00387 Histidine kinase-like ATPases C2I28_14120 SM00448 cheY-homologous receiver domain C2I28_14120 SM00850 LytTr DNA-binding domain C2I28_14125 SM00382 ATPases associated with a variety of cellular activities C2I28_14145 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_14170 SM00098 Alkaline phosphatase homologues C2I28_14175 SM00448 cheY-homologous receiver domain C2I28_14175 SM00850 LytTr DNA-binding domain C2I28_14180 SM00091 PAS domain C2I28_14180 SM00387 Histidine kinase-like ATPases C2I28_14180 SM00388 His Kinase A (phosphoacceptor) domain C2I28_14180 SM00448 cheY-homologous receiver domain C2I28_14215 SM00822 C2I28_14215 C2I28_14230 SM00729 Elongator protein 3, MiaB family, Radical SAM C2I28_14235 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_14235 SM00895 C2I28_14235 C2I28_14265 SM00091 PAS domain C2I28_14265 SM00387 Histidine kinase-like ATPases C2I28_14265 SM00388 His Kinase A (phosphoacceptor) domain C2I28_14310 SM01007 Class II Aldolase and Adducin N-terminal domain C2I28_14325 SM00382 ATPases associated with a variety of cellular activities C2I28_14355 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_14365 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2I28_14365 SM00091 PAS domain C2I28_14365 SM00387 Histidine kinase-like ATPases C2I28_14365 SM00388 His Kinase A (phosphoacceptor) domain C2I28_14375 SM00382 ATPases associated with a variety of cellular activities C2I28_14375 SM01086 C-terminal, D2-small domain, of ClpB protein C2I28_14390 SM00822 C2I28_14390 C2I28_14465 SM00257 Lysin motif C2I28_14505 SM01018 B12 binding domain C2I28_14545 SM01061 CAT RNA binding domain C2I28_14605 SM00914 C2I28_14605 C2I28_14620 SM00260 Two component signalling adaptor domain C2I28_14620 SM00448 cheY-homologous receiver domain C2I28_14630 SM00257 Lysin motif C2I28_14660 SM00052 Putative diguanylate phosphodiesterase C2I28_14720 SM01350 C2I28_14720 C2I28_14725 SM00382 ATPases associated with a variety of cellular activities C2I28_14730 SM00382 ATPases associated with a variety of cellular activities C2I28_14740 SM00849 Metallo-beta-lactamase superfamily C2I28_14775 SM00861 Transketolase, pyrimidine binding domain C2I28_14840 SM00838 Elongation factor G C-terminus C2I28_14870 SM00670 Large family of predicted nucleotide-binding domains C2I28_14890 SM00878 Biotin carboxylase C-terminal domain C2I28_14935 SM00116 Domain in cystathionine beta-synthase and other proteins. C2I28_14970 SM00851 MGS-like domain C2I28_15010 SM00479 C2I28_15010 C2I28_15010 SM00487 DEAD-like helicases superfamily C2I28_15010 SM00491 C2I28_15010 C2I28_15045 SM00478 endonuclease III C2I28_15045 SM00525 C2I28_15045 C2I28_15140 SM00357 Cold shock protein domain C2I28_15155 SM00267 diguanylate cyclase C2I28_15165 SM00487 DEAD-like helicases superfamily C2I28_15165 SM00490 helicase superfamily c-terminal domain C2I28_15210 SM00387 Histidine kinase-like ATPases C2I28_15215 SM00421 helix_turn_helix, Lux Regulon C2I28_15215 SM00448 cheY-homologous receiver domain C2I28_15220 SM00642 Alpha-amylase domain C2I28_15225 SM00981 C2I28_15225 C2I28_15250 SM00382 ATPases associated with a variety of cellular activities C2I28_15260 SM00491 C2I28_15260 C2I28_15360 SM00357 Cold shock protein domain C2I28_15375 SM00028 Tetratricopeptide repeats C2I28_15400 SM00382 ATPases associated with a variety of cellular activities C2I28_15420 SM00382 ATPases associated with a variety of cellular activities C2I28_15440 SM00052 Putative diguanylate phosphodiesterase C2I28_15440 SM00091 PAS domain C2I28_15440 SM00267 diguanylate cyclase C2I28_15470 SM00382 ATPases associated with a variety of cellular activities C2I28_15500 SM00421 helix_turn_helix, Lux Regulon C2I28_15500 SM00448 cheY-homologous receiver domain C2I28_15525 SM00155 Phospholipase D. Active site motifs. C2I28_15540 SM00257 Lysin motif C2I28_15540 SM00636 C2I28_15540 C2I28_15595 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_15610 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_15645 SM00382 ATPases associated with a variety of cellular activities C2I28_15690 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C2I28_15710 SM00382 ATPases associated with a variety of cellular activities C2I28_15730 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2I28_15730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_15730 SM00387 Histidine kinase-like ATPases C2I28_15730 SM00388 His Kinase A (phosphoacceptor) domain C2I28_15730 SM00448 cheY-homologous receiver domain C2I28_15735 SM00138 Methyltransferase, chemotaxis proteins C2I28_15740 SM00331 Sigma factor PP2C-like phosphatases C2I28_15740 SM00448 cheY-homologous receiver domain C2I28_15755 SM00100 Cyclic nucleotide-monophosphate binding domain C2I28_15775 SM00640 Glycosyl hydrolases family 32 C2I28_15845 SM00849 Metallo-beta-lactamase superfamily C2I28_15880 SM00354 helix_turn _helix lactose operon repressor C2I28_15890 SM00640 Glycosyl hydrolases family 32 C2I28_15905 SM00382 ATPases associated with a variety of cellular activities C2I28_15930 SM00640 Glycosyl hydrolases family 32 C2I28_15945 SM00062 Bacterial periplasmic substrate-binding proteins C2I28_15955 SM00382 ATPases associated with a variety of cellular activities C2I28_15955 SM00930 C2I28_15955 C2I28_16045 SM00382 ATPases associated with a variety of cellular activities C2I28_16085 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_16095 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2I28_16180 SM00861 Transketolase, pyrimidine binding domain C2I28_16190 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_16190 SM00895 C2I28_16190 C2I28_16380 SM00342 helix_turn_helix, arabinose operon control protein C2I28_16380 SM00871 Bacterial transcription activator, effector binding domain C2I28_16460 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_16460 SM00866 C2I28_16460 C2I28_16500 SM00344 helix_turn_helix ASNC type C2I28_16555 SM00357 Cold shock protein domain C2I28_16610 SM00387 Histidine kinase-like ATPases C2I28_16615 SM00257 Lysin motif C2I28_16615 SM00636 C2I28_16615 C2I28_16645 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_16685 SM00226 Low molecular weight phosphatase family C2I28_16695 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2I28_16705 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2I28_16730 SM00849 Metallo-beta-lactamase superfamily C2I28_16740 SM00342 helix_turn_helix, arabinose operon control protein C2I28_16750 SM01120 C2I28_16750 C2I28_16775 SM00478 endonuclease III C2I28_16795 SM01022 C2I28_16795 C2I28_16800 SM00382 ATPases associated with a variety of cellular activities C2I28_16915 SM00829 Enoylreductase C2I28_16950 SM00860 SMI1 / KNR4 family C2I28_17025 SM00860 SMI1 / KNR4 family C2I28_17035 SM00091 PAS domain C2I28_17035 SM00382 ATPases associated with a variety of cellular activities C2I28_17080 SM00382 ATPases associated with a variety of cellular activities C2I28_17085 SM00382 ATPases associated with a variety of cellular activities C2I28_17135 SM01130 C2I28_17135 C2I28_17165 SM00822 C2I28_17165 C2I28_17215 SM00091 PAS domain C2I28_17215 SM00382 ATPases associated with a variety of cellular activities C2I28_17265 SM00822 C2I28_17265 C2I28_17285 SM00116 Domain in cystathionine beta-synthase and other proteins. C2I28_17360 SM00861 Transketolase, pyrimidine binding domain C2I28_17375 SM00382 ATPases associated with a variety of cellular activities C2I28_17385 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_17440 SM00354 helix_turn _helix lactose operon repressor C2I28_17450 SM00858 C2I28_17450 C2I28_17455 SM00710 Parallel beta-helix repeats C2I28_17480 SM00914 C2I28_17480 C2I28_17490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_17490 SM00387 Histidine kinase-like ATPases C2I28_17490 SM00388 His Kinase A (phosphoacceptor) domain C2I28_17495 SM00448 cheY-homologous receiver domain C2I28_17495 SM00862 Transcriptional regulatory protein, C terminal C2I28_17565 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2I28_17575 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C2I28_17575 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C2I28_17575 SM00493 C2I28_17575 C2I28_17615 SM01329 C2I28_17615 C2I28_17640 SM00028 Tetratricopeptide repeats C2I28_17640 SM00530 Helix-turn-helix XRE-family like proteins C2I28_17670 SM00450 Rhodanese Homology Domain C2I28_17745 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2I28_17750 SM00382 ATPases associated with a variety of cellular activities C2I28_17755 SM00567 E-Z type HEAT repeats C2I28_17755 SM00932 Scaffold protein Nfu/NifU N terminal C2I28_17815 SM00855 Phosphoglycerate mutase family C2I28_17835 SM00422 helix_turn_helix, mercury resistance C2I28_17840 SM00833 Cobalamin synthesis protein cobW C-terminal domain C2I28_17850 SM00465 GIY-YIG type nucleases (URI domain) C2I28_17860 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C2I28_17860 SM00475 5'-3' exonuclease C2I28_17905 SM00966 SpoVT / AbrB like domain C2I28_17980 SM00387 Histidine kinase-like ATPases C2I28_17980 SM00388 His Kinase A (phosphoacceptor) domain C2I28_17995 SM00642 Alpha-amylase domain C2I28_18055 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_18075 SM00448 cheY-homologous receiver domain C2I28_18075 SM00862 Transcriptional regulatory protein, C terminal C2I28_18080 SM00387 Histidine kinase-like ATPases C2I28_18080 SM00388 His Kinase A (phosphoacceptor) domain C2I28_18100 SM00919 Malic enzyme, NAD binding domain C2I28_18100 SM01274 C2I28_18100 C2I28_18135 SM00062 Bacterial periplasmic substrate-binding proteins C2I28_18150 SM00382 ATPases associated with a variety of cellular activities C2I28_18155 SM00904 Riboflavin kinase C2I28_18170 SM00646 C2I28_18170 C2I28_18185 SM00644 C2I28_18185 C2I28_18215 SM00919 Malic enzyme, NAD binding domain C2I28_18215 SM01274 C2I28_18215 C2I28_18260 SM00422 helix_turn_helix, mercury resistance C2I28_18335 SM00155 Phospholipase D. Active site motifs. C2I28_18350 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_18400 SM00448 cheY-homologous receiver domain C2I28_18400 SM00862 Transcriptional regulatory protein, C terminal C2I28_18405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_18405 SM00387 Histidine kinase-like ATPases C2I28_18405 SM00388 His Kinase A (phosphoacceptor) domain C2I28_18435 SM00382 ATPases associated with a variety of cellular activities C2I28_18445 SM00448 cheY-homologous receiver domain C2I28_18445 SM00862 Transcriptional regulatory protein, C terminal C2I28_18450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_18450 SM00387 Histidine kinase-like ATPases C2I28_18450 SM00388 His Kinase A (phosphoacceptor) domain C2I28_18455 SM00382 ATPases associated with a variety of cellular activities C2I28_18480 SM00420 helix_turn_helix, Deoxyribose operon repressor C2I28_18480 SM01134 C2I28_18480 C2I28_18515 SM00422 helix_turn_helix, mercury resistance C2I28_18525 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2I28_18555 SM00257 Lysin motif C2I28_18560 SM00354 helix_turn _helix lactose operon repressor C2I28_18645 SM00530 Helix-turn-helix XRE-family like proteins C2I28_18665 SM00382 ATPases associated with a variety of cellular activities C2I28_18670 SM00327 von Willebrand factor (vWF) type A domain C2I28_18680 SM01038 Beta galactosidase small chain C2I28_18685 SM00342 helix_turn_helix, arabinose operon control protein C2I28_18700 SM00382 ATPases associated with a variety of cellular activities C2I28_18770 SM00448 cheY-homologous receiver domain C2I28_18770 SM00862 Transcriptional regulatory protein, C terminal C2I28_18775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_18775 SM00387 Histidine kinase-like ATPases C2I28_18775 SM00388 His Kinase A (phosphoacceptor) domain C2I28_18780 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_18825 SM00530 Helix-turn-helix XRE-family like proteins C2I28_18895 SM00530 Helix-turn-helix XRE-family like proteins C2I28_18945 SM00060 Fibronectin type 3 domain C2I28_18945 SM00710 Parallel beta-helix repeats C2I28_18975 SM00382 ATPases associated with a variety of cellular activities C2I28_19000 SM00382 ATPases associated with a variety of cellular activities C2I28_19050 SM00316 Ribosomal protein S1-like RNA-binding domain C2I28_19085 SM00342 helix_turn_helix, arabinose operon control protein C2I28_19095 SM00382 ATPases associated with a variety of cellular activities C2I28_19120 SM00382 ATPases associated with a variety of cellular activities C2I28_19135 SM00354 helix_turn _helix lactose operon repressor C2I28_19165 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C2I28_19165 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C2I28_19165 SM00493 C2I28_19165 C2I28_19205 SM00155 Phospholipase D. Active site motifs. C2I28_19260 SM00091 PAS domain C2I28_19260 SM00387 Histidine kinase-like ATPases C2I28_19260 SM00388 His Kinase A (phosphoacceptor) domain C2I28_19265 SM00382 ATPases associated with a variety of cellular activities C2I28_19265 SM00448 cheY-homologous receiver domain C2I28_19280 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C2I28_19300 SM00829 Enoylreductase C2I28_19355 SM00341 Helicase and RNase D C-terminal C2I28_19355 SM00487 DEAD-like helicases superfamily C2I28_19355 SM00490 helicase superfamily c-terminal domain C2I28_19355 SM00956 C2I28_19355 C2I28_19360 SM00091 PAS domain C2I28_19360 SM00382 ATPases associated with a variety of cellular activities C2I28_19380 SM00490 helicase superfamily c-terminal domain C2I28_19395 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C2I28_19420 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_19425 SM00382 ATPases associated with a variety of cellular activities C2I28_19455 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_19465 SM00849 Metallo-beta-lactamase superfamily C2I28_19480 SM00257 Lysin motif C2I28_19485 SM00382 ATPases associated with a variety of cellular activities C2I28_19500 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2I28_19500 SM00138 Methyltransferase, chemotaxis proteins C2I28_19500 SM00387 Histidine kinase-like ATPases C2I28_19500 SM00388 His Kinase A (phosphoacceptor) domain C2I28_19510 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase C2I28_19590 SM00028 Tetratricopeptide repeats C2I28_19640 SM00479 C2I28_19640 C2I28_19665 SM00641 Glycosyl hydrolases family 25 C2I28_19675 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2I28_19675 SM00091 PAS domain C2I28_19675 SM00387 Histidine kinase-like ATPases C2I28_19675 SM00388 His Kinase A (phosphoacceptor) domain C2I28_19730 SM00387 Histidine kinase-like ATPases C2I28_19735 SM00448 cheY-homologous receiver domain C2I28_19815 SM00091 PAS domain C2I28_19815 SM00387 Histidine kinase-like ATPases C2I28_19815 SM00388 His Kinase A (phosphoacceptor) domain C2I28_19885 SM00829 Enoylreductase C2I28_19905 SM00882 Coenzyme A transferase C2I28_19910 SM00882 Coenzyme A transferase C2I28_19960 SM00849 Metallo-beta-lactamase superfamily C2I28_20055 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_20075 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2I28_20080 SM00849 Metallo-beta-lactamase superfamily C2I28_20095 SM00450 Rhodanese Homology Domain C2I28_20150 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C2I28_20155 SM00641 Glycosyl hydrolases family 25 C2I28_20170 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_20185 SM00155 Phospholipase D. Active site motifs. C2I28_20190 SM00849 Metallo-beta-lactamase superfamily C2I28_20195 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C2I28_20275 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_20340 SM00838 Elongation factor G C-terminus C2I28_20340 SM00889 Elongation factor G, domain IV C2I28_20380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2I28_20380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_20420 SM00346 helix_turn_helix isocitrate lyase regulation C2I28_20425 SM00878 Biotin carboxylase C-terminal domain C2I28_20435 SM00797 Allophanate hydrolase subunit 2 C2I28_20440 SM00796 Allophanate hydrolase subunit 1 C2I28_20460 SM00642 Alpha-amylase domain C2I28_20485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_20485 SM00387 Histidine kinase-like ATPases C2I28_20485 SM00388 His Kinase A (phosphoacceptor) domain C2I28_20490 SM00448 cheY-homologous receiver domain C2I28_20490 SM00862 Transcriptional regulatory protein, C terminal C2I28_20500 SM00829 Enoylreductase C2I28_20600 SM00487 DEAD-like helicases superfamily C2I28_20600 SM00490 helicase superfamily c-terminal domain C2I28_20615 SM00421 helix_turn_helix, Lux Regulon C2I28_20615 SM00448 cheY-homologous receiver domain C2I28_20620 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2I28_20635 SM00530 Helix-turn-helix XRE-family like proteins C2I28_20645 SM00773 Proposed nucleic acid binding domain C2I28_20665 SM01131 C2I28_20665 C2I28_20695 SM00563 Phosphate acyltransferases C2I28_20750 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_20840 SM00434 DNA Topoisomerase IV C2I28_20845 SM00387 Histidine kinase-like ATPases C2I28_20845 SM00433 TopoisomeraseII C2I28_20850 SM00881 CoA binding domain C2I28_20855 SM01207 C2I28_20855 C2I28_20920 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen C2I28_20950 SM01092 CO dehydrogenase flavoprotein C-terminal domain C2I28_20955 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C2I28_21020 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_21100 SM00422 helix_turn_helix, mercury resistance C2I28_21110 SM00947 Carbonic anhydrase C2I28_21120 SM00448 cheY-homologous receiver domain C2I28_21120 SM00862 Transcriptional regulatory protein, C terminal C2I28_21125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_21125 SM00387 Histidine kinase-like ATPases C2I28_21125 SM00388 His Kinase A (phosphoacceptor) domain C2I28_21135 SM00860 SMI1 / KNR4 family C2I28_21250 SM00914 C2I28_21250 C2I28_21280 SM00919 Malic enzyme, NAD binding domain C2I28_21280 SM01274 C2I28_21280 C2I28_21295 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2I28_21370 SM00914 C2I28_21370 C2I28_21395 SM00382 ATPases associated with a variety of cellular activities C2I28_21405 SM00421 helix_turn_helix, Lux Regulon C2I28_21405 SM00448 cheY-homologous receiver domain C2I28_21475 SM00248 ankyrin repeats C2I28_21490 SM00248 ankyrin repeats C2I28_21545 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_21565 SM00420 helix_turn_helix, Deoxyribose operon repressor C2I28_21565 SM01134 C2I28_21565 C2I28_21620 SM00382 ATPases associated with a variety of cellular activities C2I28_21635 SM00357 Cold shock protein domain C2I28_21640 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_21650 SM00357 Cold shock protein domain C2I28_21685 SM00829 Enoylreductase C2I28_21695 SM00850 LytTr DNA-binding domain C2I28_21710 SM00257 Lysin motif C2I28_21725 SM00835 Cupin C2I28_21820 SM00860 SMI1 / KNR4 family C2I28_21930 SM00382 ATPases associated with a variety of cellular activities C2I28_21955 SM00354 helix_turn _helix lactose operon repressor C2I28_22010 SM00091 PAS domain C2I28_22010 SM00382 ATPases associated with a variety of cellular activities C2I28_22015 SM00849 Metallo-beta-lactamase superfamily C2I28_22050 SM00062 Bacterial periplasmic substrate-binding proteins C2I28_22095 SM01133 C2I28_22095 C2I28_22100 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain C2I28_22115 SM00507 HNH nucleases C2I28_22140 SM01207 C2I28_22140 C2I28_22150 SM00849 Metallo-beta-lactamase superfamily C2I28_22205 SM00854 Bacterial capsule synthesis protein PGA_cap C2I28_22220 SM00052 Putative diguanylate phosphodiesterase C2I28_22290 SM00829 Enoylreductase C2I28_22295 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_22295 SM00895 C2I28_22295 C2I28_22320 SM01091 Transporter associated domain C2I28_22345 SM00382 ATPases associated with a variety of cellular activities C2I28_22350 SM00382 ATPases associated with a variety of cellular activities C2I28_22395 SM00318 Staphylococcal nuclease homologues C2I28_22400 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. C2I28_22465 SM00346 helix_turn_helix isocitrate lyase regulation C2I28_22520 SM00382 ATPases associated with a variety of cellular activities C2I28_22620 SM00387 Histidine kinase-like ATPases C2I28_22620 SM00388 His Kinase A (phosphoacceptor) domain C2I28_22625 SM00448 cheY-homologous receiver domain C2I28_22625 SM00862 Transcriptional regulatory protein, C terminal C2I28_22655 SM00861 Transketolase, pyrimidine binding domain C2I28_22695 SM00871 Bacterial transcription activator, effector binding domain C2I28_22735 SM00938 Nitrogen regulatory protein P-II C2I28_22785 SM01324 C2I28_22785 C2I28_22820 SM00382 ATPases associated with a variety of cellular activities C2I28_22865 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C2I28_22870 SM00354 helix_turn _helix lactose operon repressor C2I28_22910 SM00563 Phosphate acyltransferases C2I28_22945 SM00988 UreE urease accessory protein, N-terminal domain C2I28_22970 SM00257 Lysin motif C2I28_22975 SM00257 Lysin motif C2I28_23020 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_23040 SM00382 ATPases associated with a variety of cellular activities C2I28_23090 SM01091 Transporter associated domain C2I28_23105 SM00116 Domain in cystathionine beta-synthase and other proteins. C2I28_23140 SM00830 Chorismate mutase type II C2I28_23190 SM01060 C2I28_23190 C2I28_23255 SM00116 Domain in cystathionine beta-synthase and other proteins. C2I28_23295 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2I28_23325 SM00287 Bacterial SH3 domain homologues C2I28_23325 SM00646 C2I28_23325 C2I28_23335 SM00966 SpoVT / AbrB like domain C2I28_23350 SM00240 Forkhead associated domain C2I28_23350 SM00862 Transcriptional regulatory protein, C terminal C2I28_23385 SM00046 Diacylglycerol kinase catalytic domain (presumed) C2I28_23420 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C2I28_23420 SM00091 PAS domain C2I28_23475 SM00422 helix_turn_helix, mercury resistance C2I28_23490 SM00870 C2I28_23490 C2I28_23495 SM00530 Helix-turn-helix XRE-family like proteins C2I28_23510 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2I28_23560 SM00919 Malic enzyme, NAD binding domain C2I28_23560 SM01274 C2I28_23560 C2I28_23610 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_23615 SM00422 helix_turn_helix, mercury resistance C2I28_23785 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2I28_23810 SM00257 Lysin motif C2I28_23810 SM00646 C2I28_23810 C2I28_23860 SM00829 Enoylreductase C2I28_23875 SM00871 Bacterial transcription activator, effector binding domain C2I28_23970 SM00357 Cold shock protein domain C2I28_24020 SM00382 ATPases associated with a variety of cellular activities C2I28_24035 SM00257 Lysin motif C2I28_24095 SM00530 Helix-turn-helix XRE-family like proteins C2I28_24105 SM00354 helix_turn _helix lactose operon repressor C2I28_24185 SM00342 helix_turn_helix, arabinose operon control protein C2I28_24195 SM00421 helix_turn_helix, Lux Regulon C2I28_24195 SM00448 cheY-homologous receiver domain C2I28_24245 SM01350 C2I28_24245 C2I28_24250 SM00861 Transketolase, pyrimidine binding domain C2I28_24265 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2I28_24290 SM00382 ATPases associated with a variety of cellular activities C2I28_24300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_24300 SM00387 Histidine kinase-like ATPases C2I28_24300 SM00388 His Kinase A (phosphoacceptor) domain C2I28_24305 SM00448 cheY-homologous receiver domain C2I28_24305 SM00862 Transcriptional regulatory protein, C terminal C2I28_24325 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C2I28_24325 SM00387 Histidine kinase-like ATPases C2I28_24325 SM00388 His Kinase A (phosphoacceptor) domain C2I28_24350 SM00422 helix_turn_helix, mercury resistance C2I28_24370 SM00342 helix_turn_helix, arabinose operon control protein C2I28_24415 SM00382 ATPases associated with a variety of cellular activities C2I28_24545 SM00448 cheY-homologous receiver domain C2I28_24545 SM00862 Transcriptional regulatory protein, C terminal C2I28_24550 SM00387 Histidine kinase-like ATPases C2I28_24555 SM00382 ATPases associated with a variety of cellular activities C2I28_24600 SM00450 Rhodanese Homology Domain C2I28_24600 SM00849 Metallo-beta-lactamase superfamily C2I28_24605 SM00450 Rhodanese Homology Domain C2I28_24610 SM00450 Rhodanese Homology Domain C2I28_24615 SM00450 Rhodanese Homology Domain C2I28_24685 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_24685 SM00866 C2I28_24685 C2I28_24705 SM00894 Excalibur calcium-binding domain C2I28_24715 SM00530 Helix-turn-helix XRE-family like proteins C2I28_24770 SM00267 diguanylate cyclase C2I28_24925 SM00357 Cold shock protein domain C2I28_24930 SM00357 Cold shock protein domain C2I28_24960 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_24960 SM00895 C2I28_24960 C2I28_24995 SM00530 Helix-turn-helix XRE-family like proteins C2I28_25035 SM01001 AIR carboxylase C2I28_25085 SM00382 ATPases associated with a variety of cellular activities C2I28_25195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C2I28_25195 SM00387 Histidine kinase-like ATPases C2I28_25195 SM00388 His Kinase A (phosphoacceptor) domain C2I28_25200 SM00448 cheY-homologous receiver domain C2I28_25200 SM00862 Transcriptional regulatory protein, C terminal C2I28_25215 SM00382 ATPases associated with a variety of cellular activities C2I28_25240 SM00857 Resolvase, N terminal domain C2I28_25285 SM00829 Enoylreductase C2I28_25290 SM00422 helix_turn_helix, mercury resistance C2I28_25330 SM00357 Cold shock protein domain C2I28_25340 SM00248 ankyrin repeats C2I28_25345 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C2I28_25350 SM00091 PAS domain C2I28_25350 SM00267 diguanylate cyclase C2I28_25355 SM00287 Bacterial SH3 domain homologues C2I28_25400 SM00631 C2I28_25400 C2I28_25445 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_25445 SM00895 C2I28_25445 C2I28_25475 SM00420 helix_turn_helix, Deoxyribose operon repressor C2I28_25475 SM01134 C2I28_25475 C2I28_25525 SM00530 Helix-turn-helix XRE-family like proteins C2I28_25575 SM01007 Class II Aldolase and Adducin N-terminal domain C2I28_25585 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_25620 SM00899 C2I28_25620 C2I28_25655 SM00347 helix_turn_helix multiple antibiotic resistance protein C2I28_25730 SM01130 C2I28_25730 C2I28_25750 SM00346 helix_turn_helix isocitrate lyase regulation C2I28_25815 SM00860 SMI1 / KNR4 family C2I28_25860 SM00530 Helix-turn-helix XRE-family like proteins C2I28_25915 SM00357 Cold shock protein domain C2I28_25935 SM00829 Enoylreductase C2I28_25970 SM00422 helix_turn_helix, mercury resistance C2I28_25985 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C2I28_26000 SM00346 helix_turn_helix isocitrate lyase regulation C2I28_26010 SM00382 ATPases associated with a variety of cellular activities C2I28_26035 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_26035 SM00866 C2I28_26035 C2I28_26090 SM00387 Histidine kinase-like ATPases C2I28_26090 SM00388 His Kinase A (phosphoacceptor) domain C2I28_26095 SM00448 cheY-homologous receiver domain C2I28_26095 SM00862 Transcriptional regulatory protein, C terminal C2I28_26100 SM00382 ATPases associated with a variety of cellular activities C2I28_26165 SM00530 Helix-turn-helix XRE-family like proteins C2I28_26175 SM00344 helix_turn_helix ASNC type C2I28_26215 SM00422 helix_turn_helix, mercury resistance C2I28_26225 SM00387 Histidine kinase-like ATPases C2I28_26230 SM00421 helix_turn_helix, Lux Regulon C2I28_26230 SM00448 cheY-homologous receiver domain C2I28_26235 SM00530 Helix-turn-helix XRE-family like proteins C2I28_26240 SM00530 Helix-turn-helix XRE-family like proteins C2I28_26325 SM00387 Histidine kinase-like ATPases C2I28_26330 SM00421 helix_turn_helix, Lux Regulon C2I28_26330 SM00448 cheY-homologous receiver domain C2I28_26335 SM00530 Helix-turn-helix XRE-family like proteins C2I28_26340 SM00530 Helix-turn-helix XRE-family like proteins C2I28_26480 SM00825 Beta-ketoacyl synthase C2I28_26485 SM00825 Beta-ketoacyl synthase C2I28_26565 SM00530 Helix-turn-helix XRE-family like proteins C2I28_26600 SM00028 Tetratricopeptide repeats C2I28_26615 SM00248 ankyrin repeats C2I28_26630 SM00860 SMI1 / KNR4 family C2I28_26670 SM00860 SMI1 / KNR4 family C2I28_26700 SM00382 ATPases associated with a variety of cellular activities C2I28_26745 SM00345 helix_turn_helix gluconate operon transcriptional repressor C2I28_26745 SM00866 C2I28_26745 C2I28_26795 SM00966 SpoVT / AbrB like domain C2I28_26810 SM00411 bacterial (prokaryotic) histone like domain C2I28_26935 SM00028 Tetratricopeptide repeats C2I28_26945 SM00914 C2I28_26945 C2I28_26955 SM01091 Transporter associated domain C2I28_26975 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C2I28_27015 SM00849 Metallo-beta-lactamase superfamily C2I28_27050 SM00860 SMI1 / KNR4 family C2I28_27065 SM00422 helix_turn_helix, mercury resistance C2I28_27075 SM00387 Histidine kinase-like ATPases C2I28_27080 SM00421 helix_turn_helix, Lux Regulon C2I28_27080 SM00448 cheY-homologous receiver domain C2I28_27085 SM00530 Helix-turn-helix XRE-family like proteins C2I28_27090 SM00530 Helix-turn-helix XRE-family like proteins C2I28_27165 SM00422 helix_turn_helix, mercury resistance C2I28_27175 SM00387 Histidine kinase-like ATPases C2I28_27180 SM00421 helix_turn_helix, Lux Regulon C2I28_27180 SM00448 cheY-homologous receiver domain C2I28_27185 SM00530 Helix-turn-helix XRE-family like proteins C2I28_27190 SM00530 Helix-turn-helix XRE-family like proteins C2I28_27295 SM00422 helix_turn_helix, mercury resistance C2I28_27315 SM00112 Cadherin repeats. C2I28_27635 SM00857 Resolvase, N terminal domain C2I28_27640 SM00914 C2I28_27640 C2I28_27695 SM00422 helix_turn_helix, mercury resistance C2I28_27715 SM00112 Cadherin repeats. C2I28_27725 SM00112 Cadherin repeats.